Citrus Sinensis ID: 014484
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 423 | 2.2.26 [Sep-21-2011] | |||||||
| Q9FHD7 | 487 | Probable serine/threonine | no | no | 0.910 | 0.790 | 0.735 | 1e-172 | |
| Q944A7 | 512 | Probable serine/threonine | no | no | 0.917 | 0.757 | 0.682 | 1e-157 | |
| Q7XJT7 | 465 | Probable inactive recepto | no | no | 0.888 | 0.808 | 0.489 | 1e-105 | |
| Q9LFP7 | 493 | Probable receptor-like pr | no | no | 0.541 | 0.464 | 0.365 | 1e-31 | |
| Q9SRH7 | 490 | Receptor-like serine/thre | no | no | 0.541 | 0.467 | 0.353 | 4e-31 | |
| Q06548 | 410 | Protein kinase APK1A, chl | no | no | 0.505 | 0.521 | 0.378 | 1e-30 | |
| O49839 | 426 | Protein kinase 2A, chloro | no | no | 0.503 | 0.5 | 0.342 | 2e-30 | |
| O49840 | 426 | Protein kinase 2B, chloro | no | no | 0.505 | 0.502 | 0.343 | 3e-30 | |
| Q8H186 | 389 | Probable receptor-like pr | no | no | 0.527 | 0.573 | 0.334 | 3e-29 | |
| P46573 | 412 | Protein kinase APK1B, chl | no | no | 0.505 | 0.519 | 0.370 | 4e-29 |
| >sp|Q9FHD7|Y5126_ARATH Probable serine/threonine-protein kinase At5g41260 OS=Arabidopsis thaliana GN=At5g41260 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 603 bits (1555), Expect = e-172, Method: Compositional matrix adjust.
Identities = 286/389 (73%), Positives = 331/389 (85%), Gaps = 4/389 (1%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
LEEAKAVG LR+ R+ANL+GCCYE +ERLL+AEFMPNETLAKHLFHWE+QPMKWAMRLRV
Sbjct: 101 LEEAKAVGQLRNHRMANLLGCCYEDEERLLIAEFMPNETLAKHLFHWESQPMKWAMRLRV 160
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP 152
AL++AQALEYC+SKGRALYHDLNAYR+LFD D NPRLS FGLMKNSRDGKSYSTNLAFTP
Sbjct: 161 ALHIAQALEYCTSKGRALYHDLNAYRVLFDDDANPRLSCFGLMKNSRDGKSYSTNLAFTP 220
Query: 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 212
PEY+RTGRVTPESV+YSFGT+LLDLLSGKHIPPSHALDLIR +N +LMDS LEG FS+D
Sbjct: 221 PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQMLMDSGLEGQFSSD 280
Query: 213 EGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEVPSYVLLGIQHETAPSTKPLSL 272
+GTEL+RLASRCLQ E RERPN KSLV +++ LQK+ E+ S+ LLG+ + S +L
Sbjct: 281 DGTELIRLASRCLQYEPRERPNPKSLVSAMIPLQKDLEIASHQLLGVPN----SATTTAL 336
Query: 273 TPLGEACSRLDLTAIHEILEGMGYKDDEGIANELSFQMWTSQMQETLNSKKHGDTAFRAK 332
+PLGEAC R DLTAIHEI+E +GYKDDEG ELSFQMWT QMQ+TL KK GD+AFR K
Sbjct: 337 SPLGEACLRSDLTAIHEIIEKLGYKDDEGATTELSFQMWTDQMQDTLVFKKKGDSAFRHK 396
Query: 333 DFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYL 392
DF+ AI+CY+QFI+ GTM SPTV+AR+ L YLMNDMP+EAL +AMQAQV+SP W A YL
Sbjct: 397 DFAKAIECYSQFIEVGTMGSPTVHARQSLCYLMNDMPREALNNAMQAQVISPAWHIASYL 456
Query: 393 QAACLFSLGMENDARETLKDGTNLEAKKN 421
QA L +LG EN+A LKDG LE+K+N
Sbjct: 457 QAVALSALGQENEAHTALKDGAMLESKRN 485
|
Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|Q944A7|Y4523_ARATH Probable serine/threonine-protein kinase At4g35230 OS=Arabidopsis thaliana GN=At4g35230 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 556 bits (1433), Expect = e-157, Method: Compositional matrix adjust.
Identities = 266/390 (68%), Positives = 311/390 (79%), Gaps = 2/390 (0%)
Query: 34 EEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVA 93
EEA VG LR RLANLIG C + DERLLVAEFMPN+TLAKHLFHWE Q ++WAMRLRV
Sbjct: 119 EEAWGVGKLRHNRLANLIGYCCDGDERLLVAEFMPNDTLAKHLFHWENQTIEWAMRLRVG 178
Query: 94 LYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTPP 153
Y+A+AL+YCS++GR LYHDLNAYR+LFD+DG+PRLS FGLMKNSRDGKSYSTNLA+TPP
Sbjct: 179 YYIAEALDYCSTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSRDGKSYSTNLAYTPP 238
Query: 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDE 213
EY+R GRVTPESV YSFGT+LLDLLSGKHIPPSHALD+IR KN +LLMDS LEG FS +E
Sbjct: 239 EYLRNGRVTPESVTYSFGTVLLDLLSGKHIPPSHALDMIRGKNIILLMDSHLEGKFSTEE 298
Query: 214 GTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEVPSYVLLGI-QHETAPSTKPLSL 272
T +V LAS+CLQ E RERPN K LV +L LQ +++VPSYV+LGI + E APST L
Sbjct: 299 ATVVVELASQCLQYEPRERPNTKDLVATLAPLQTKSDVPSYVMLGIKKQEEAPSTPQRPL 358
Query: 273 TPLGEACSRLDLTAIHEILEGMGYKDDEGIANELSFQMWTSQMQETLNSKKHGDTAFRAK 332
+PLGEACSR+DLTAIH+IL Y+DDEG NELSFQ WT QM++ L+++K GD +FR K
Sbjct: 359 SPLGEACSRMDLTAIHQILVMTHYRDDEG-TNELSFQEWTQQMKDMLDARKRGDQSFREK 417
Query: 333 DFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYL 392
DF TAIDCY+QFID GTMVSPTV+ RR L YL+ D P AL DAMQAQ V PDWPTA Y+
Sbjct: 418 DFKTAIDCYSQFIDVGTMVSPTVFGRRSLCYLLCDQPDAALRDAMQAQCVYPDWPTAFYM 477
Query: 393 QAACLFSLGMENDARETLKDGTNLEAKKNK 422
Q+ L L M DA + L + LE K+ +
Sbjct: 478 QSVALAKLNMNTDAADMLNEAAQLEEKRQR 507
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q7XJT7|SSP_ARATH Probable inactive receptor-like kinase SSP OS=Arabidopsis thaliana GN=SSP PE=1 SV=1 | Back alignment and function description |
|---|
Score = 383 bits (983), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/390 (48%), Positives = 265/390 (67%), Gaps = 14/390 (3%)
Query: 31 LNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRL 90
L LEEA+ VG LR +RL NLIG C + D+R LVA+FM N+TLAK LF + Q M W++RL
Sbjct: 90 LFLEEAQRVGKLRHKRLVNLIGYCCDGDKRFLVADFMANDTLAKRLFQRKYQTMDWSIRL 149
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAF 150
RVA ++A+AL+YC++ G A Y++L+AY++LFD+DG+ LS FGLMK + +
Sbjct: 150 RVAYFVAEALDYCNTAGFASYNNLSAYKVLFDEDGDACLSCFGLMKEINNDQ-------- 201
Query: 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFS 210
+ TG V PE+V+Y FGT+L++LLSGK IPPSHA ++I KN LMD L+G FS
Sbjct: 202 -----ITTGSVNPENVIYRFGTVLVNLLSGKQIPPSHAPEMIHRKNVFKLMDPYLKGKFS 256
Query: 211 NDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEVPSYVLLGIQHETAPSTKPL 270
DE + +LAS+CL+ E +E PN K +V +L +LQ E PSY ++ + ++ ++
Sbjct: 257 IDEANVVYKLASQCLKYEGQESPNTKEIVATLETLQTRTEAPSYEVVEMTNQEKDASSSS 316
Query: 271 SLTPLGEACSRLDLTAIHEILEGMGYKDDEGIANELSFQMWTSQMQETLNSKKHGDTAFR 330
+L+PLGEAC R+DL +IH IL GY DD+ I ELSF+ W +++E + +++GD AF
Sbjct: 317 NLSPLGEACLRMDLASIHSILVLAGYDDDKDII-ELSFEEWIQEVKELQDVRRNGDRAFV 375
Query: 331 AKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTAL 390
+DF TAI CY+QF++ ++V P+VYARR LSYL D P++AL D M AQ V PDWPTA
Sbjct: 376 EQDFKTAIACYSQFVEERSLVYPSVYARRSLSYLFCDEPEKALLDGMHAQGVFPDWPTAF 435
Query: 391 YLQAACLFSLGMENDARETLKDGTNLEAKK 420
YLQ+ L L M D+ +TLK+ LE KK
Sbjct: 436 YLQSVALAKLDMNTDSADTLKEAALLEVKK 465
|
Probable inactive protein kinase that activates the YODA MAP kinase cascade, regulating the asymmetric first division, and thus embryo polarity. Acts as an adapter at the plasma membrane, possibly recruiting an activator. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9LFP7|Y5158_ARATH Probable receptor-like protein kinase At5g15080 OS=Arabidopsis thaliana GN=At5g15080 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 137 bits (346), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/252 (36%), Positives = 136/252 (53%), Gaps = 23/252 (9%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L E +GNL L L+G C E D+RLLV EFMP +L HLF + P+ W++R+++
Sbjct: 194 LAEINFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKI 252
Query: 93 ALYLAQALEYCSSKG--RALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD-GKSY-STNL 148
AL A+ L + + +Y D IL D D N +LS FGL K++ D GK++ ST +
Sbjct: 253 ALGAAKGLSFLHEEALKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPDEGKTHVSTRV 312
Query: 149 ----AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSG-----KHIPPS-HAL------DLI 192
+ PEY+ TG +T +S VYSFG +LL++L+G K+ P H L L+
Sbjct: 313 MGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLL 372
Query: 193 RSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQ--KEAE 250
+ F L+D LEGHFS ++ +LA++CL + + RP +V +L L K+
Sbjct: 373 DKRRFYRLLDPRLEGHFSIKGAQKVTQLAAQCLSRDPKIRPKMSDVVEALKPLPHLKDMA 432
Query: 251 VPSYVLLGIQHE 262
SY +Q E
Sbjct: 433 SSSYYFQTMQAE 444
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9SRH7|Y3130_ARATH Receptor-like serine/threonine-protein kinase At3g01300 OS=Arabidopsis thaliana GN=At3g01300 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 136 bits (342), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/252 (35%), Positives = 134/252 (53%), Gaps = 23/252 (9%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L E +GNL L L+G C E D+RLLV EFMP +L HLF + P+ W++R+++
Sbjct: 188 LAEINYLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKI 246
Query: 93 ALYLAQALEYCSSKG--RALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD-GKSYST--- 146
AL A+ L + + +Y D IL D + N +LS FGL K++ D GK++ +
Sbjct: 247 ALGAAKGLSFLHEEALKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDAPDEGKTHVSTRV 306
Query: 147 --NLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSG-----KHIPPS-HAL------DLI 192
+ PEY+ TG +T +S VYSFG +LL++L+G K+ P H L L+
Sbjct: 307 MGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLL 366
Query: 193 RSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQ--KEAE 250
+ F L+D LEGHFS ++ +LA++CL +++ RP +V L L K+
Sbjct: 367 DKRRFYRLLDPRLEGHFSVKGAQKVTQLAAQCLSRDSKIRPKMSEVVEVLKPLPHLKDMA 426
Query: 251 VPSYVLLGIQHE 262
SY +Q E
Sbjct: 427 SASYYFQTMQAE 438
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q06548|APK1A_ARATH Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1 | Back alignment and function description |
|---|
Score = 134 bits (337), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/235 (37%), Positives = 129/235 (54%), Gaps = 21/235 (8%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH--WETQPMKWAMRL 90
L E +G L LIG C E + RLLV EFMP +L HLF QP+ W +RL
Sbjct: 120 LAEVNYLGQFSHRHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGLYFQPLSWKLRL 179
Query: 91 RVALYLAQALEYC-SSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSY-STN 147
+VAL A+ L + SS+ R +Y D IL D + N +LS FGL K+ G KS+ ST
Sbjct: 180 KVALGAAKGLAFLHSSETRVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPIGDKSHVSTR 239
Query: 148 L----AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP----PSHALDLIR-SKNFL 198
+ + PEY+ TG +T +S VYSFG +LL+LLSG+ PS +L+ +K +L
Sbjct: 240 VMGTHGYAAPEYLATGHLTTKSDVYSFGVVLLELLSGRRAVDKNRPSGERNLVEWAKPYL 299
Query: 199 L-------LMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQ 246
+ ++D+ L+ +S +E ++ L+ RCL +E + RPN +V L +Q
Sbjct: 300 VNKRKIFRVIDNRLQDQYSMEEACKVATLSLRCLTTEIKLRPNMSEVVSHLEHIQ 354
|
Possible bi-functional kinase. In vitro, it exhibits serine/threonine activity. In vivo, can phosphorylate tyrosine residues of limited substrates. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O49839|APK2A_ARATH Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=2 SV=1 | Back alignment and function description |
|---|
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 122/242 (50%), Gaps = 29/242 (11%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L E +G L L L+G C E + RLLV EFMP +L HLF QP+ WA+R++V
Sbjct: 138 LTEVNYLGQLSHPNLVLLVGYCAEGENRLLVYEFMPKGSLENHLFRRGAQPLTWAIRMKV 197
Query: 93 ALYLAQALEYC-SSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKN--SRDGKSYSTNL- 148
A+ A+ L + +K + +Y D A IL D D N +LS FGL K + D ST +
Sbjct: 198 AVGAAKGLTFLHEAKSQVIYRDFKAANILLDADFNAKLSDFGLAKAGPTGDNTHVSTKVI 257
Query: 149 ---AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALD--------------- 190
+ PEY+ TGR+T +S VYSFG +LL+L+SG+ A+D
Sbjct: 258 GTHGYAAPEYVATGRLTAKSDVYSFGVVLLELISGR-----RAMDNSNGGNEYSLVDWAT 312
Query: 191 --LIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248
L + +MD+ L G + LA +CL +A+ RP ++++L L+
Sbjct: 313 PYLGDKRKLFRIMDTKLGGQYPQKGAFTAANLALQCLNPDAKLRPKMSEVLVTLEQLESV 372
Query: 249 AE 250
A+
Sbjct: 373 AK 374
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O49840|APK2B_ARATH Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1 | Back alignment and function description |
|---|
Score = 133 bits (334), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/233 (34%), Positives = 117/233 (50%), Gaps = 19/233 (8%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L E +G L L L+G C E + RLLV EFMP +L HLF QP+ WA+R++V
Sbjct: 135 LTEVNYLGQLSHPNLVKLVGYCVEGENRLLVYEFMPKGSLENHLFRRGAQPLTWAIRMKV 194
Query: 93 ALYLAQALEYC-SSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS--YSTNL- 148
A+ A+ L + +K + +Y D A IL D + N +LS FGL K G ST +
Sbjct: 195 AIGAAKGLTFLHDAKSQVIYRDFKAANILLDAEFNSKLSDFGLAKAGPTGDKTHVSTQVM 254
Query: 149 ---AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRS----------- 194
+ PEY+ TGR+T +S VYSFG +LL+LLSG+ + + +S
Sbjct: 255 GTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDKSKVGMEQSLVDWATPYLGD 314
Query: 195 -KNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQ 246
+ +MD+ L G + LA +CL +A+ RP ++ L L+
Sbjct: 315 KRKLFRIMDTRLGGQYPQKGAYTAASLALQCLNPDAKLRPKMSEVLAKLDQLE 367
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q8H186|Y3545_ARATH Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 130 bits (326), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/245 (33%), Positives = 125/245 (51%), Gaps = 22/245 (8%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF---HWETQPMKWAMR 89
L E +G L L LIG C E ++RLLV EFM +L HLF + + +P+ W +R
Sbjct: 113 LTEINYLGQLSHPNLVKLIGYCLEDEQRLLVYEFMHKGSLENHLFANGNKDFKPLSWILR 172
Query: 90 LRVALYLAQALEYCSSKG-RALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSYST- 146
++VAL A+ L + S + +Y D+ A IL D D N +LS FGL ++ G +SY +
Sbjct: 173 IKVALDAAKGLAFLHSDPVKVIYRDIKASNILLDSDFNAKLSDFGLARDGPMGEQSYVST 232
Query: 147 ----NLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGK----HIPPSHALDLI------ 192
+ PEY+ TG + S VYSFG +LL+LL G+ H P+ +L+
Sbjct: 233 RVMGTFGYAAPEYVSTGHLNARSDVYSFGVVLLELLCGRQALDHNRPAKEQNLVDWARPY 292
Query: 193 --RSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAE 250
+ LL++D+ L + + L +A +CL E + RP +V +L+ LQ
Sbjct: 293 LTSRRKVLLIVDTRLNSQYKPEGAVRLASIAVQCLSFEPKSRPTMDQVVRALVQLQDSVV 352
Query: 251 VPSYV 255
P+ V
Sbjct: 353 KPANV 357
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|P46573|APK1B_ARATH Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2 | Back alignment and function description |
|---|
Score = 129 bits (324), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 87/235 (37%), Positives = 127/235 (54%), Gaps = 21/235 (8%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWET--QPMKWAMRL 90
L E +G L LIG C E + RLLV EFMP +L HLF + QP+ W +RL
Sbjct: 121 LAEVNYLGQFSHPNLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGSYFQPLSWTLRL 180
Query: 91 RVALYLAQALEYC-SSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSY-STN 147
+VAL A+ L + +++ +Y D IL D + N +LS FGL K+ G KS+ ST
Sbjct: 181 KVALGAAKGLAFLHNAETSVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPTGDKSHVSTR 240
Query: 148 L----AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSG-----KHIPPSH------ALDLI 192
+ + PEY+ TG +T +S VYS+G +LL++LSG K+ PP A L+
Sbjct: 241 IMGTYGYAAPEYLATGHLTTKSDVYSYGVVLLEVLSGRRAVDKNRPPGEQKLVEWARPLL 300
Query: 193 RSKNFLL-LMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQ 246
+K L ++D+ L+ +S +E ++ LA RCL E + RPN +V L +Q
Sbjct: 301 ANKRKLFRVIDNRLQDQYSMEEACKVATLALRCLTFEIKLRPNMNEVVSHLEHIQ 355
|
Possible bi-functional kinase. In vitro, it exhibits serine/threonine activity. In vivo, can phosphorylate tyrosine residues of limited substrates. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 423 | ||||||
| 224138934 | 491 | predicted protein [Populus trichocarpa] | 0.924 | 0.796 | 0.900 | 0.0 | |
| 224087605 | 491 | predicted protein [Populus trichocarpa] | 0.924 | 0.796 | 0.897 | 0.0 | |
| 225440554 | 491 | PREDICTED: probable serine/threonine-pro | 0.924 | 0.796 | 0.887 | 0.0 | |
| 356504321 | 491 | PREDICTED: probable serine/threonine-pro | 0.924 | 0.796 | 0.890 | 0.0 | |
| 255573947 | 491 | receptor protein kinase, putative [Ricin | 0.924 | 0.796 | 0.887 | 0.0 | |
| 449506466 | 491 | PREDICTED: probable serine/threonine-pro | 0.924 | 0.796 | 0.869 | 0.0 | |
| 449460335 | 491 | PREDICTED: probable serine/threonine-pro | 0.924 | 0.796 | 0.867 | 0.0 | |
| 297745973 | 490 | unnamed protein product [Vitis vinifera] | 0.921 | 0.795 | 0.864 | 0.0 | |
| 359478579 | 512 | PREDICTED: probable serine/threonine-pro | 0.921 | 0.761 | 0.864 | 0.0 | |
| 356496122 | 490 | PREDICTED: LOW QUALITY PROTEIN: probable | 0.919 | 0.793 | 0.853 | 0.0 |
| >gi|224138934|ref|XP_002322938.1| predicted protein [Populus trichocarpa] gi|222867568|gb|EEF04699.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 737 bits (1903), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/391 (90%), Positives = 372/391 (95%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
LEEA+ VG+LRSERLANLIGCC EA+ERLLVAEFMP+ETLAKHLFHWE+QPMKWAMRLRV
Sbjct: 101 LEEARTVGSLRSERLANLIGCCCEAEERLLVAEFMPHETLAKHLFHWESQPMKWAMRLRV 160
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP 152
ALYLAQALEYC SKGRALYHDLNAYRILFDKDGNPRLS FGLMKNSRDGKSYSTNLAFTP
Sbjct: 161 ALYLAQALEYCGSKGRALYHDLNAYRILFDKDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 220
Query: 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 212
PEY+RTGRVTPESVVYSFGT+LLDLLSGKHIPPSHALDLIR KNFL+LMDSALEGHFS D
Sbjct: 221 PEYLRTGRVTPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSALEGHFSKD 280
Query: 213 EGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEVPSYVLLGIQHETAPSTKPLSL 272
+GTELVRLASRCLQ EARERPNAKSLV +LMSLQKE EVPSYVL+GI+ ETA ST PLSL
Sbjct: 281 DGTELVRLASRCLQYEARERPNAKSLVTALMSLQKETEVPSYVLMGIREETASSTLPLSL 340
Query: 273 TPLGEACSRLDLTAIHEILEGMGYKDDEGIANELSFQMWTSQMQETLNSKKHGDTAFRAK 332
TP GEAC R+DLTAIHEILE +GYKDDEGIANELSFQMWT+QMQETLNSKKHGD AFRAK
Sbjct: 341 TPFGEACLRMDLTAIHEILEKIGYKDDEGIANELSFQMWTNQMQETLNSKKHGDAAFRAK 400
Query: 333 DFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYL 392
DF+TAIDCYTQFIDGGTMVSPTVYARRCLSYLM+DMPQEALGDAMQAQVVSPDW TA YL
Sbjct: 401 DFATAIDCYTQFIDGGTMVSPTVYARRCLSYLMSDMPQEALGDAMQAQVVSPDWSTASYL 460
Query: 393 QAACLFSLGMENDARETLKDGTNLEAKKNKN 423
QAACLFSLGME DA+ETLKDGT+LEAK+NKN
Sbjct: 461 QAACLFSLGMETDAQETLKDGTHLEAKRNKN 491
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224087605|ref|XP_002308195.1| predicted protein [Populus trichocarpa] gi|222854171|gb|EEE91718.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 737 bits (1903), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/391 (89%), Positives = 372/391 (95%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
LEEA+ VG+LRSERLANLIGCC E +ERLLVAEFMP+ETLAKHLFHWE+QPMKWAMRLRV
Sbjct: 101 LEEARTVGSLRSERLANLIGCCCEGEERLLVAEFMPHETLAKHLFHWESQPMKWAMRLRV 160
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP 152
ALYLAQALEYC SKGRALYHDLNAYRILFDKDGNPRLS FGLMKNSRDGKSYSTNLAFTP
Sbjct: 161 ALYLAQALEYCCSKGRALYHDLNAYRILFDKDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 220
Query: 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 212
PEY+RTGRVTPESVVYSFGT+LLDLLSGKHIPPSHALDLIR KNFL+LMDSALEGHFS D
Sbjct: 221 PEYLRTGRVTPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSALEGHFSKD 280
Query: 213 EGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEVPSYVLLGIQHETAPSTKPLSL 272
+GTELVRLASRCLQ EARERPNAKSLV +L+SLQKE EVPSYVL+GI+ ETA ST+PLSL
Sbjct: 281 DGTELVRLASRCLQYEARERPNAKSLVTALLSLQKETEVPSYVLMGIRQETASSTQPLSL 340
Query: 273 TPLGEACSRLDLTAIHEILEGMGYKDDEGIANELSFQMWTSQMQETLNSKKHGDTAFRAK 332
TP GEAC R DLTAIHEILE +GYKDDEGIANELSFQMWT+QMQETLNSKKHGDTAFRAK
Sbjct: 341 TPFGEACLRTDLTAIHEILEKIGYKDDEGIANELSFQMWTNQMQETLNSKKHGDTAFRAK 400
Query: 333 DFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYL 392
DF+TAIDCYTQFIDGGTMVSPTVYARRCLSYLM+DMPQEALGDAMQAQVVSP+W TA YL
Sbjct: 401 DFATAIDCYTQFIDGGTMVSPTVYARRCLSYLMSDMPQEALGDAMQAQVVSPEWSTASYL 460
Query: 393 QAACLFSLGMENDARETLKDGTNLEAKKNKN 423
QAACLFSLGME DA+ETLKDGTNLEAK+NKN
Sbjct: 461 QAACLFSLGMETDAQETLKDGTNLEAKRNKN 491
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225440554|ref|XP_002276280.1| PREDICTED: probable serine/threonine-protein kinase At5g41260 [Vitis vinifera] gi|297740276|emb|CBI30458.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 735 bits (1898), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/391 (88%), Positives = 371/391 (94%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
+EEA++VGNLR+ERLANLIGCC E DERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV
Sbjct: 101 VEEARSVGNLRNERLANLIGCCCEGDERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 160
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP 152
ALYLAQALEYCSSKGRALYHDLNAYR+LFD+DGNPRLS FGLMKNSRDGKSYSTNLAFTP
Sbjct: 161 ALYLAQALEYCSSKGRALYHDLNAYRVLFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 220
Query: 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 212
PEY+RTGRVTPESVVYSFGT+LLDLLSGKHIPPSHALDLIR KNFL+LMDS LEGHFSND
Sbjct: 221 PEYLRTGRVTPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSND 280
Query: 213 EGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEVPSYVLLGIQHETAPSTKPLSL 272
+GTELVRLASRCLQ EARERPNAKSLV +LMSLQKE EVPSY+L+GI H+TA +PLSL
Sbjct: 281 DGTELVRLASRCLQYEARERPNAKSLVTALMSLQKETEVPSYILMGIAHDTASPAEPLSL 340
Query: 273 TPLGEACSRLDLTAIHEILEGMGYKDDEGIANELSFQMWTSQMQETLNSKKHGDTAFRAK 332
TP GEAC R+DLTAIHEIL+ +GYKDDEGIANELSFQMWT+QMQETLNSKKHGDTAFRAK
Sbjct: 341 TPFGEACLRMDLTAIHEILDKIGYKDDEGIANELSFQMWTNQMQETLNSKKHGDTAFRAK 400
Query: 333 DFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYL 392
DF+TAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSP+W TA YL
Sbjct: 401 DFTTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPEWATAFYL 460
Query: 393 QAACLFSLGMENDARETLKDGTNLEAKKNKN 423
QAA LFSLGM+ DA+ETLKDGTNLE KK+KN
Sbjct: 461 QAAALFSLGMDTDAQETLKDGTNLEVKKSKN 491
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356504321|ref|XP_003520945.1| PREDICTED: probable serine/threonine-protein kinase At5g41260-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 732 bits (1890), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/391 (89%), Positives = 367/391 (93%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
LEEAK VG+LRSERLANL+G CYE +ERLLVAEFMP+ETLAKHLFHWE QPMKWAMRLRV
Sbjct: 101 LEEAKQVGSLRSERLANLVGYCYEGEERLLVAEFMPHETLAKHLFHWEAQPMKWAMRLRV 160
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP 152
A YLAQALEYC+SKGR LYHDLNAYRILFD+D NPRLS FGLMKNSRDGKSYSTNLAFTP
Sbjct: 161 AFYLAQALEYCTSKGRGLYHDLNAYRILFDQDANPRLSCFGLMKNSRDGKSYSTNLAFTP 220
Query: 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 212
PEY+RTGRVTPESVVYSFGT+LLDLLSGKHIPPSHALDLIR KNFL+LMDSALEGHFS D
Sbjct: 221 PEYLRTGRVTPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSALEGHFSKD 280
Query: 213 EGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEVPSYVLLGIQHETAPSTKPLSL 272
+GTELVRLASRCLQ EARERPNAKSLV SL+SLQKE EVPSYVL+G+Q ETA S K LSL
Sbjct: 281 DGTELVRLASRCLQYEARERPNAKSLVASLLSLQKETEVPSYVLMGLQQETASSAKQLSL 340
Query: 273 TPLGEACSRLDLTAIHEILEGMGYKDDEGIANELSFQMWTSQMQETLNSKKHGDTAFRAK 332
TP GEAC RLDLTAIHEILE GYKDDEGIANELSFQ+WTSQMQETLN KKHGDTAFRAK
Sbjct: 341 TPFGEACLRLDLTAIHEILEKTGYKDDEGIANELSFQLWTSQMQETLNLKKHGDTAFRAK 400
Query: 333 DFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYL 392
DF TAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDM QEALGDAMQAQVVSP+WPT+LYL
Sbjct: 401 DFVTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMAQEALGDAMQAQVVSPEWPTSLYL 460
Query: 393 QAACLFSLGMENDARETLKDGTNLEAKKNKN 423
QAACLFSLGMENDA+ETLKDGTN+EA+KNKN
Sbjct: 461 QAACLFSLGMENDAQETLKDGTNMEARKNKN 491
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255573947|ref|XP_002527892.1| receptor protein kinase, putative [Ricinus communis] gi|223532743|gb|EEF34523.1| receptor protein kinase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 727 bits (1876), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/391 (88%), Positives = 368/391 (94%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
LEEA++VG+LRSERLANLIGCC E DERLLVAEFMP+ETLAKHLFHWE QPMKWAMRLRV
Sbjct: 101 LEEARSVGSLRSERLANLIGCCCEGDERLLVAEFMPHETLAKHLFHWENQPMKWAMRLRV 160
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP 152
ALYLAQALEYCSSKGRALYHDLNAYR+LFDKD +PRLS FGLMKNSRDGKSYSTNLAFTP
Sbjct: 161 ALYLAQALEYCSSKGRALYHDLNAYRVLFDKDADPRLSCFGLMKNSRDGKSYSTNLAFTP 220
Query: 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 212
PEY+RTGRVTPESVVYSFGT+LLDLLSGKHIPPSHALDLI+ KNF +LMDSALEG FS D
Sbjct: 221 PEYLRTGRVTPESVVYSFGTLLLDLLSGKHIPPSHALDLIKGKNFPMLMDSALEGRFSKD 280
Query: 213 EGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEVPSYVLLGIQHETAPSTKPLSL 272
+GTELVRLASRCLQ EARERPNAKSLV SL+SLQKE EVPSYVL+ I HET ST+ LSL
Sbjct: 281 DGTELVRLASRCLQYEARERPNAKSLVTSLLSLQKETEVPSYVLMDIPHETGSSTQQLSL 340
Query: 273 TPLGEACSRLDLTAIHEILEGMGYKDDEGIANELSFQMWTSQMQETLNSKKHGDTAFRAK 332
TP GEAC R+DLTAIHEILE +GYKDDEGIANELSFQMWTSQMQETLNSKKHGDTAFRAK
Sbjct: 341 TPFGEACLRVDLTAIHEILEKLGYKDDEGIANELSFQMWTSQMQETLNSKKHGDTAFRAK 400
Query: 333 DFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYL 392
DF+TAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSP+WPTA YL
Sbjct: 401 DFATAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPEWPTASYL 460
Query: 393 QAACLFSLGMENDARETLKDGTNLEAKKNKN 423
QAACLFSLGME DA+ETLKDGT LEAK+NK+
Sbjct: 461 QAACLFSLGMETDAQETLKDGTKLEAKRNKS 491
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449506466|ref|XP_004162757.1| PREDICTED: probable serine/threonine-protein kinase At5g41260-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 716 bits (1849), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/391 (86%), Positives = 364/391 (93%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EA++VGNLRSERLANLIGCC E +ERLLVAEFMPNETLAKHLFHWE+ PMKWAMRLRV
Sbjct: 101 LDEARSVGNLRSERLANLIGCCCEGEERLLVAEFMPNETLAKHLFHWESHPMKWAMRLRV 160
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP 152
ALYL+QALEYCS KGRALYHDLNAYRILFD+DGNPRLS FGLMKNSRDGKSYSTNLAFTP
Sbjct: 161 ALYLSQALEYCSGKGRALYHDLNAYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 220
Query: 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 212
PEY+RTGRVTPESVVYS+GT+LLDLLSGKHIPPSHALDLIR KNFL+LMDSALEGHFSND
Sbjct: 221 PEYLRTGRVTPESVVYSYGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSALEGHFSND 280
Query: 213 EGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEVPSYVLLGIQHETAPSTKPLSL 272
+GTELVRLASRCLQ EARERPNAKSLV +LM LQK+ EVPSYVL+GI E A ST+PLSL
Sbjct: 281 DGTELVRLASRCLQYEARERPNAKSLVTALMPLQKDTEVPSYVLMGITPENATSTQPLSL 340
Query: 273 TPLGEACSRLDLTAIHEILEGMGYKDDEGIANELSFQMWTSQMQETLNSKKHGDTAFRAK 332
TP GEAC R DLTAIHE+L+ GYKDDEGIANELSFQMWTSQMQETLNSKKHGDTAFRA+
Sbjct: 341 TPFGEACLRKDLTAIHEMLDKNGYKDDEGIANELSFQMWTSQMQETLNSKKHGDTAFRAR 400
Query: 333 DFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYL 392
DF+TAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDM QEALGDAMQAQ +SP+W TA YL
Sbjct: 401 DFATAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMGQEALGDAMQAQAISPEWATAFYL 460
Query: 393 QAACLFSLGMENDARETLKDGTNLEAKKNKN 423
QA CLFSLGMENDA+E LK+GT EAKKNKN
Sbjct: 461 QATCLFSLGMENDAQEALKEGTKFEAKKNKN 491
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449460335|ref|XP_004147901.1| PREDICTED: probable serine/threonine-protein kinase At5g41260-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 713 bits (1841), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/391 (86%), Positives = 363/391 (92%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EA++VGNLRSERLANLIGCC E +ERLLVAEFMPNETLAKHLFHWE+ PMKWAMRLRV
Sbjct: 101 LDEARSVGNLRSERLANLIGCCCEGEERLLVAEFMPNETLAKHLFHWESHPMKWAMRLRV 160
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP 152
ALYL+QALEYCS KGRALYHDLNAYRILFD+DGNPRLS FGLMKNSRDGKSYSTNLAFTP
Sbjct: 161 ALYLSQALEYCSGKGRALYHDLNAYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 220
Query: 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 212
PEY+RTGRVTPESVVYS+GT+LLDLLSGKHIPPSHALDLIR KNFL+LMDSALEGHFSND
Sbjct: 221 PEYLRTGRVTPESVVYSYGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSALEGHFSND 280
Query: 213 EGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEVPSYVLLGIQHETAPSTKPLSL 272
+GTELVRLASRCLQ EARERPNAKSLV +LM LQK+ EV SYVL+GI E A ST+PLSL
Sbjct: 281 DGTELVRLASRCLQYEARERPNAKSLVTALMPLQKDTEVLSYVLMGITPENATSTQPLSL 340
Query: 273 TPLGEACSRLDLTAIHEILEGMGYKDDEGIANELSFQMWTSQMQETLNSKKHGDTAFRAK 332
TP GEAC R DLTAIHE+L+ GYKDDEGIANELSFQMWTSQMQETLNSKKHGDTAFRA+
Sbjct: 341 TPFGEACLRKDLTAIHEMLDKNGYKDDEGIANELSFQMWTSQMQETLNSKKHGDTAFRAR 400
Query: 333 DFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYL 392
DF+TAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDM QEALGDAMQAQ +SP+W TA YL
Sbjct: 401 DFATAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMGQEALGDAMQAQAISPEWATAFYL 460
Query: 393 QAACLFSLGMENDARETLKDGTNLEAKKNKN 423
QA CLFSLGMENDA+E LK+GT EAKKNKN
Sbjct: 461 QATCLFSLGMENDAQEALKEGTKFEAKKNKN 491
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297745973|emb|CBI16029.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 711 bits (1834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/390 (86%), Positives = 362/390 (92%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
LEEA+AVG LR+ERLANLIGCC E +ERLLVAEFMPNETL+KHLFHWE QPMKWAMRLRV
Sbjct: 100 LEEARAVGQLRNERLANLIGCCCEGEERLLVAEFMPNETLSKHLFHWEAQPMKWAMRLRV 159
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP 152
ALYLAQALEYCSSKGRALYHDLNAYR+LFD+DGNPRLS FGLMKNSRDGKSYSTNLAFTP
Sbjct: 160 ALYLAQALEYCSSKGRALYHDLNAYRVLFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 219
Query: 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 212
PEY+RTGRVT ESVVYSFGT+LLDLLSGKHIPPSHALDLIR KNFL+LMDS LEGHFSND
Sbjct: 220 PEYLRTGRVTAESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSND 279
Query: 213 EGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEVPSYVLLGIQHETAPSTKPLSL 272
+GTELVRLASRCLQ E RERPNA+SLV SL LQKE EVPSYVL+GIQ ET + L L
Sbjct: 280 DGTELVRLASRCLQYEPRERPNARSLVTSLTPLQKETEVPSYVLMGIQQETVSPAETLPL 339
Query: 273 TPLGEACSRLDLTAIHEILEGMGYKDDEGIANELSFQMWTSQMQETLNSKKHGDTAFRAK 332
TPLGEACSR+DLTAIHEILE +GYKDDEG+ANELSFQMWT+Q+QETLNSKK GDTAFRAK
Sbjct: 340 TPLGEACSRMDLTAIHEILEKVGYKDDEGVANELSFQMWTNQIQETLNSKKRGDTAFRAK 399
Query: 333 DFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYL 392
DF+TAI+CYTQFIDGGTMVSPTV+ARRCL YLMN+MPQEALGDAMQAQVVSPDW TA YL
Sbjct: 400 DFTTAIECYTQFIDGGTMVSPTVFARRCLCYLMNEMPQEALGDAMQAQVVSPDWSTAFYL 459
Query: 393 QAACLFSLGMENDARETLKDGTNLEAKKNK 422
QAA LFSLGM+NDARETLKDGT LEAK+N+
Sbjct: 460 QAAALFSLGMDNDARETLKDGTTLEAKRNR 489
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359478579|ref|XP_002280021.2| PREDICTED: probable serine/threonine-protein kinase At5g41260-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 709 bits (1831), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/390 (86%), Positives = 360/390 (92%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
LEEA+AVG LR+ERLANLIGCC E +ERLLVAEFMPNETL+KHLFHWE QPMKWAMRLRV
Sbjct: 100 LEEARAVGQLRNERLANLIGCCCEGEERLLVAEFMPNETLSKHLFHWEAQPMKWAMRLRV 159
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP 152
ALYLAQALEYCSSKGRALYHDLNAYR+LFD+DGNPRLS FGLMKNSRDGKSYSTNLAFTP
Sbjct: 160 ALYLAQALEYCSSKGRALYHDLNAYRVLFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 219
Query: 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 212
PEY+RTGRVT ESVVYSFGT+LLDLLSGKHIPPSHALDLIR KNFL+LMDS LEGHFSND
Sbjct: 220 PEYLRTGRVTAESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSND 279
Query: 213 EGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEVPSYVLLGIQHETAPSTKPLSL 272
+GTELVRLASRCLQ E RERPNA+SLV SL LQKE EVPSYVL+GIQ ET + L L
Sbjct: 280 DGTELVRLASRCLQYEPRERPNARSLVTSLTPLQKETEVPSYVLMGIQQETVSPAETLPL 339
Query: 273 TPLGEACSRLDLTAIHEILEGMGYKDDEGIANELSFQMWTSQMQETLNSKKHGDTAFRAK 332
TPLGEACSR+DLTAIHEILE +GYKDDEG+ANELSFQMWT+Q+QETLNSKK GDTAFRAK
Sbjct: 340 TPLGEACSRMDLTAIHEILEKVGYKDDEGVANELSFQMWTNQIQETLNSKKRGDTAFRAK 399
Query: 333 DFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYL 392
DF+TAI+CYTQFIDGGTMVSPTV+ARRCL YLMN+MPQEALGDAMQAQVVSPDW TA YL
Sbjct: 400 DFTTAIECYTQFIDGGTMVSPTVFARRCLCYLMNEMPQEALGDAMQAQVVSPDWSTAFYL 459
Query: 393 QAACLFSLGMENDARETLKDGTNLEAKKNK 422
QAA LFSLGM+NDARETLKDGT LE KK K
Sbjct: 460 QAAALFSLGMDNDARETLKDGTTLEGKKQK 489
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356496122|ref|XP_003516919.1| PREDICTED: LOW QUALITY PROTEIN: probable serine/threonine-protein kinase At5g41260-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 696 bits (1797), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/389 (85%), Positives = 354/389 (91%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVAL 94
EA+ VG+LRSERLANL+G CYE +ERLLVA FMP+ETL K LFHWE QPMKWAMRLRVA
Sbjct: 102 EARQVGSLRSERLANLVGYCYEGEERLLVAXFMPHETLGKLLFHWEAQPMKWAMRLRVAF 161
Query: 95 YLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPE 154
YLAQALEYC+SKGR LYHDLNAYRILFD+D NPRLS FGLMK SRDGKSYSTNLAFTPPE
Sbjct: 162 YLAQALEYCTSKGRGLYHDLNAYRILFDQDANPRLSCFGLMKKSRDGKSYSTNLAFTPPE 221
Query: 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEG 214
Y+RTGRVTP+SVVYSFGT+LLDLLSGKHIPPS ALDLIR KNFL+LMDSALEGHFS D+G
Sbjct: 222 YLRTGRVTPQSVVYSFGTLLLDLLSGKHIPPSLALDLIRGKNFLMLMDSALEGHFSKDDG 281
Query: 215 TELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEVPSYVLLGIQHETAPSTKPLSLTP 274
TELVRLASRCLQ EARERPNAKSLV SLMSLQ E EVPSYVL+G++ ETA K ++LTP
Sbjct: 282 TELVRLASRCLQYEARERPNAKSLVASLMSLQNETEVPSYVLMGLRQETASXNKAITLTP 341
Query: 275 LGEACSRLDLTAIHEILEGMGYKDDEGIANELSFQMWTSQMQETLNSKKHGDTAFRAKDF 334
GEAC RLDLTAIHEILE GYKDDEGIANELSFQ+WTSQMQETLN KKHGDTAFRAKDF
Sbjct: 342 FGEACLRLDLTAIHEILEKTGYKDDEGIANELSFQLWTSQMQETLNLKKHGDTAFRAKDF 401
Query: 335 STAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQA 394
TAIDCYTQFIDGGTMVSPTVYA RCLS LMNDM QEALGDAMQAQVVSP+WPTALYL A
Sbjct: 402 ITAIDCYTQFIDGGTMVSPTVYAIRCLSLLMNDMAQEALGDAMQAQVVSPEWPTALYLHA 461
Query: 395 ACLFSLGMENDARETLKDGTNLEAKKNKN 423
ACLFSLGMENDA+ETLKDGTN+E +KNKN
Sbjct: 462 ACLFSLGMENDAQETLKDGTNMEGRKNKN 490
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 423 | ||||||
| TAIR|locus:2084475 | 490 | BSK6 "brassinosteroid-signalin | 0.921 | 0.795 | 0.831 | 3.7e-183 | |
| TAIR|locus:2154538 | 489 | BSK5 "brassinosteroid-signalin | 0.924 | 0.799 | 0.820 | 1.4e-181 | |
| TAIR|locus:2127118 | 489 | BSK3 "brassinosteroid-signalin | 0.907 | 0.785 | 0.755 | 1.2e-160 | |
| TAIR|locus:2031279 | 487 | BSK7 "brassinosteroid-signalin | 0.912 | 0.792 | 0.753 | 5.3e-159 | |
| TAIR|locus:2155115 | 487 | BSK8 "brassinosteroid-signalin | 0.910 | 0.790 | 0.737 | 9.2e-155 | |
| TAIR|locus:2122058 | 512 | BSK1 "brassinosteroid-signalin | 0.917 | 0.757 | 0.682 | 2.3e-142 | |
| TAIR|locus:2198160 | 483 | BSK4 "brassinosteroid-signalin | 0.895 | 0.784 | 0.675 | 1.9e-138 | |
| TAIR|locus:2083499 | 477 | BSK9 "brassinosteroid-signalin | 0.912 | 0.809 | 0.659 | 7.7e-135 | |
| TAIR|locus:2150074 | 499 | BSK10 "brassinosteroid-signali | 0.912 | 0.773 | 0.626 | 2.1e-132 | |
| TAIR|locus:2142315 | 489 | BSK2 "brassinosteroid-signalin | 0.914 | 0.791 | 0.614 | 3.9e-131 |
| TAIR|locus:2084475 BSK6 "brassinosteroid-signaling kinase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1709 (606.7 bits), Expect = 3.7e-183, Sum P(2) = 3.7e-183
Identities = 326/392 (83%), Positives = 359/392 (91%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EAKAVG+LRS+RLANLIGCC+E +ERLLVAEFMP+ETLAKHLFHWE PMKWAMRLRV
Sbjct: 98 LDEAKAVGSLRSDRLANLIGCCFEGEERLLVAEFMPHETLAKHLFHWENNPMKWAMRLRV 157
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP 152
AL LAQALEYCS+KGRALYHDLNAYR+LFDKDGNPRLS FGLMKNSRDGKSYSTNLAFTP
Sbjct: 158 ALCLAQALEYCSNKGRALYHDLNAYRVLFDKDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 217
Query: 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 212
PEY+RTGRVTPESVV+SFGT+LLDL+SGKHIPPSHALDLIR KN +LMDSALEGHFSN+
Sbjct: 218 PEYLRTGRVTPESVVFSFGTVLLDLMSGKHIPPSHALDLIRGKNCAMLMDSALEGHFSNE 277
Query: 213 EGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEVPSYVLLGIQHET-APSTKPLS 271
+GTELVRLA+RCLQ EARERPN KSLV SL++LQKE++V SYVL+GI HET A PLS
Sbjct: 278 DGTELVRLATRCLQYEARERPNVKSLVTSLVTLQKESDVASYVLMGIPHETEAEEESPLS 337
Query: 272 LTPLGEACSRLDLTAIHEILEGMGYKDDEGIANELSFQMWTSQMQETLNSKKHGDTAFRA 331
LTP G+AC R+DLTAI EIL +GYKDDEGIANELSFQMWT+QMQE+LNSKK GD AFR+
Sbjct: 338 LTPFGDACLRVDLTAIQEILSKIGYKDDEGIANELSFQMWTNQMQESLNSKKQGDLAFRS 397
Query: 332 KDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALY 391
KDF+TA+DCYTQFIDGGTMVSPTV+ARRCLSYLMND QEAL DA+QAQVVSPDWPTALY
Sbjct: 398 KDFTTAVDCYTQFIDGGTMVSPTVHARRCLSYLMNDNAQEALTDALQAQVVSPDWPTALY 457
Query: 392 LQAACLFSLGMENDARETLKDGTNLEAKK-NK 422
LQAACLF LGME DA++ LKDGT LEAKK NK
Sbjct: 458 LQAACLFKLGMEADAQQALKDGTTLEAKKSNK 489
|
|
| TAIR|locus:2154538 BSK5 "brassinosteroid-signaling kinase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1692 (600.7 bits), Expect = 1.4e-181, Sum P(2) = 1.4e-181
Identities = 321/391 (82%), Positives = 354/391 (90%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
LEEAKAVG LR+ERLANLIG C E DERLLVAEFMP ETL+KHLFHW++QPMKW+MRLRV
Sbjct: 97 LEEAKAVGQLRNERLANLIGFCCEGDERLLVAEFMPFETLSKHLFHWDSQPMKWSMRLRV 156
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP 152
ALYLAQALEYCSSKGRALYHDLNAYRILFD+DGNPRLS FGLMKNSRDGKSYSTNLAFTP
Sbjct: 157 ALYLAQALEYCSSKGRALYHDLNAYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 216
Query: 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 212
PEY+RTGRV PESVVYSFGT+LLDLLSGKHIPPSHALDLIR KNFL+LMDS L+GHFSND
Sbjct: 217 PEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLDGHFSND 276
Query: 213 EGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEVPSYVLLGIQHETAPSTKPLSL 272
+GT+LVRLASRCLQ EARERPN KSLV SL LQKE ++PS+VL+GI H A + SL
Sbjct: 277 DGTDLVRLASRCLQYEARERPNVKSLVSSLAPLQKETDIPSHVLMGIPHGAASPKETTSL 336
Query: 273 TPLGEACSRLDLTAIHEILEGMGYKDDEGIANELSFQMWTSQMQETLNSKKHGDTAFRAK 332
TPLG+ACSR DLTAIHEILE +GYKDDEG+ANELSFQ+WT Q+QETLNSKK GD AF+ K
Sbjct: 337 TPLGDACSRHDLTAIHEILEKVGYKDDEGVANELSFQVWTDQIQETLNSKKQGDAAFKGK 396
Query: 333 DFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYL 392
DF TA++CYTQFI+ GTMVSPTV+ARRCL YLM++MPQEALGDAMQAQVVSP+WPTA YL
Sbjct: 397 DFVTAVECYTQFIEDGTMVSPTVFARRCLCYLMSNMPQEALGDAMQAQVVSPEWPTAFYL 456
Query: 393 QAACLFSLGMENDARETLKDGTNLEAKKNKN 423
QAA LFSLGM+ DA ETLKDGT+LEAKK+ N
Sbjct: 457 QAAALFSLGMDKDACETLKDGTSLEAKKHNN 487
|
|
| TAIR|locus:2127118 BSK3 "brassinosteroid-signaling kinase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1520 (540.1 bits), Expect = 1.2e-160, Sum P(2) = 1.2e-160
Identities = 294/389 (75%), Positives = 332/389 (85%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
LEEA++VG LRSER+ANL+GCC E DERLLVAEFMPNETLAKHLFHWETQPMKW MRLRV
Sbjct: 100 LEEARSVGQLRSERMANLLGCCCEGDERLLVAEFMPNETLAKHLFHWETQPMKWTMRLRV 159
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP 152
LYLAQALEYC+SKGR LYHDLNAYR+LFD++ NPRLS+FGLMKNSRDGKSYSTNLAFTP
Sbjct: 160 VLYLAQALEYCTSKGRTLYHDLNAYRVLFDEECNPRLSTFGLMKNSRDGKSYSTNLAFTP 219
Query: 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 212
PEY+RTGR+TPESV+YSFGT+LLDLLSGKHIPPSHALDLIR +N L DS L+G FS+
Sbjct: 220 PEYLRTGRITPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQTLTDSCLDGQFSDS 279
Query: 213 EGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEVPSYVLLGIQHETAPSTKPLSL 272
+GTELVRLASRCLQ EARERPN KSLV +L LQKE EV S+VL+G+ H + S PLS
Sbjct: 280 DGTELVRLASRCLQYEARERPNTKSLVTALTPLQKETEVLSHVLMGLPH--SGSVSPLS- 336
Query: 273 TPLGEACSRLDLTAIHEILEGMGYKDDEGIANELSFQMWTSQMQETLNSKKHGDTAFRAK 332
PLGEACSR DLTA+ EILE +GYKDDEG+ NELSF MWT QMQE+LNSKK GD AFR K
Sbjct: 337 -PLGEACSRRDLTAMLEILEKLGYKDDEGVTNELSFHMWTDQMQESLNSKKKGDVAFRQK 395
Query: 333 DFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYL 392
DF AI+CYTQFIDGG M+SPTV ARR L YLM+DMP+EAL DA+QAQV+SP W A YL
Sbjct: 396 DFREAIECYTQFIDGG-MISPTVCARRSLCYLMSDMPKEALDDAIQAQVISPVWHVASYL 454
Query: 393 QAACLFSLGMENDARETLKDGTNLEAKKN 421
Q+A L LGME +++ LK+G+NLEAK N
Sbjct: 455 QSASLGILGMEKESQIALKEGSNLEAKMN 483
|
|
| TAIR|locus:2031279 BSK7 "brassinosteroid-signaling kinase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1549 (550.3 bits), Expect = 5.3e-159, P = 5.3e-159
Identities = 294/390 (75%), Positives = 337/390 (86%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
LEEAKAVG LR+ R+ANL+GCCYE +ERLLVAEFMPNETLAKHLFHWE+QPMKWAMRLRV
Sbjct: 101 LEEAKAVGQLRNYRMANLLGCCYEGEERLLVAEFMPNETLAKHLFHWESQPMKWAMRLRV 160
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP 152
AL++AQALEYC+ KGRALYHDLNAYR+LFD D NPRLS FGLMKNSRDGKSYSTNLAFTP
Sbjct: 161 ALHIAQALEYCTGKGRALYHDLNAYRVLFDDDSNPRLSCFGLMKNSRDGKSYSTNLAFTP 220
Query: 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 212
PEY+RTGRVTPESV+YS+GT+LLDLLSGKHIPPSHALDLIR +N +L+DS LEG FS+D
Sbjct: 221 PEYLRTGRVTPESVMYSYGTLLLDLLSGKHIPPSHALDLIRDRNIQMLIDSCLEGQFSSD 280
Query: 213 EGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEVPSYVLLGIQHETAPSTKPLSL 272
+GTEL+RLASRCLQ E RERPN KSLV +++ LQK+ E PS+ L+GI ++ ST PLS
Sbjct: 281 DGTELIRLASRCLQYEPRERPNPKSLVTAMIPLQKDLETPSHQLMGIP--SSASTTPLS- 337
Query: 273 TPLGEACSRLDLTAIHEILEGMGYKDDEGIANELSFQMWTSQMQETLNSKKHGDTAFRAK 332
PLGEAC R DLTAIHEILE + YKDDEG A ELSFQMWT+QMQ++LN KK GD AFR K
Sbjct: 338 -PLGEACLRTDLTAIHEILEKLSYKDDEGAATELSFQMWTNQMQDSLNFKKKGDVAFRHK 396
Query: 333 DFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYL 392
+F+ AIDCY+QFI+GGTMVSPTVYARR L YLMN+MPQEAL DAMQAQV+SP W A YL
Sbjct: 397 EFANAIDCYSQFIEGGTMVSPTVYARRSLCYLMNEMPQEALNDAMQAQVISPAWHIASYL 456
Query: 393 QAACLFSLGMENDARETLKDGTNLEAKKNK 422
QA L +LG EN+A LKDG+ LE+K+N+
Sbjct: 457 QAVALSALGQENEAHAALKDGSMLESKRNR 486
|
|
| TAIR|locus:2155115 BSK8 "brassinosteroid-signaling kinase 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1509 (536.3 bits), Expect = 9.2e-155, P = 9.2e-155
Identities = 287/389 (73%), Positives = 334/389 (85%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
LEEAKAVG LR+ R+ANL+GCCYE +ERLL+AEFMPNETLAKHLFHWE+QPMKWAMRLRV
Sbjct: 101 LEEAKAVGQLRNHRMANLLGCCYEDEERLLIAEFMPNETLAKHLFHWESQPMKWAMRLRV 160
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP 152
AL++AQALEYC+SKGRALYHDLNAYR+LFD D NPRLS FGLMKNSRDGKSYSTNLAFTP
Sbjct: 161 ALHIAQALEYCTSKGRALYHDLNAYRVLFDDDANPRLSCFGLMKNSRDGKSYSTNLAFTP 220
Query: 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 212
PEY+RTGRVTPESV+YSFGT+LLDLLSGKHIPPSHALDLIR +N +LMDS LEG FS+D
Sbjct: 221 PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQMLMDSGLEGQFSSD 280
Query: 213 EGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEVPSYVLLGIQHETAPSTKPLSL 272
+GTEL+RLASRCLQ E RERPN KSLV +++ LQK+ E+ S+ LLG+ + +A +T +L
Sbjct: 281 DGTELIRLASRCLQYEPRERPNPKSLVSAMIPLQKDLEIASHQLLGVPN-SATTT---AL 336
Query: 273 TPLGEACSRLDLTAIHEILEGMGYKDDEGIANELSFQMWTSQMQETLNSKKHGDTAFRAK 332
+PLGEAC R DLTAIHEI+E +GYKDDEG ELSFQMWT QMQ+TL KK GD+AFR K
Sbjct: 337 SPLGEACLRSDLTAIHEIIEKLGYKDDEGATTELSFQMWTDQMQDTLVFKKKGDSAFRHK 396
Query: 333 DFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYL 392
DF+ AI+CY+QFI+ GTM SPTV+AR+ L YLMNDMP+EAL +AMQAQV+SP W A YL
Sbjct: 397 DFAKAIECYSQFIEVGTMGSPTVHARQSLCYLMNDMPREALNNAMQAQVISPAWHIASYL 456
Query: 393 QAACLFSLGMENDARETLKDGTNLEAKKN 421
QA L +LG EN+A LKDG LE+K+N
Sbjct: 457 QAVALSALGQENEAHTALKDGAMLESKRN 485
|
|
| TAIR|locus:2122058 BSK1 "brassinosteroid-signaling kinase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1392 (495.1 bits), Expect = 2.3e-142, P = 2.3e-142
Identities = 266/390 (68%), Positives = 311/390 (79%)
Query: 34 EEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVA 93
EEA VG LR RLANLIG C + DERLLVAEFMPN+TLAKHLFHWE Q ++WAMRLRV
Sbjct: 119 EEAWGVGKLRHNRLANLIGYCCDGDERLLVAEFMPNDTLAKHLFHWENQTIEWAMRLRVG 178
Query: 94 LYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTPP 153
Y+A+AL+YCS++GR LYHDLNAYR+LFD+DG+PRLS FGLMKNSRDGKSYSTNLA+TPP
Sbjct: 179 YYIAEALDYCSTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSRDGKSYSTNLAYTPP 238
Query: 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDE 213
EY+R GRVTPESV YSFGT+LLDLLSGKHIPPSHALD+IR KN +LLMDS LEG FS +E
Sbjct: 239 EYLRNGRVTPESVTYSFGTVLLDLLSGKHIPPSHALDMIRGKNIILLMDSHLEGKFSTEE 298
Query: 214 GTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEVPSYVLLGIQ-HETAPSTKPLSL 272
T +V LAS+CLQ E RERPN K LV +L LQ +++VPSYV+LGI+ E APST L
Sbjct: 299 ATVVVELASQCLQYEPRERPNTKDLVATLAPLQTKSDVPSYVMLGIKKQEEAPSTPQRPL 358
Query: 273 TPLGEACSRLDLTAIHEILEGMGYKDDEGIANELSFQMWTSQMQETLNSKKHGDTAFRAK 332
+PLGEACSR+DLTAIH+IL Y+DDEG NELSFQ WT QM++ L+++K GD +FR K
Sbjct: 359 SPLGEACSRMDLTAIHQILVMTHYRDDEG-TNELSFQEWTQQMKDMLDARKRGDQSFREK 417
Query: 333 DFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYL 392
DF TAIDCY+QFID GTMVSPTV+ RR L YL+ D P AL DAMQAQ V PDWPTA Y+
Sbjct: 418 DFKTAIDCYSQFIDVGTMVSPTVFGRRSLCYLLCDQPDAALRDAMQAQCVYPDWPTAFYM 477
Query: 393 QAACLFSLGMENDARETLKDGTNLEAKKNK 422
Q+ L L M DA + L + LE K+ +
Sbjct: 478 QSVALAKLNMNTDAADMLNEAAQLEEKRQR 507
|
|
| TAIR|locus:2198160 BSK4 "brassinosteroid-signaling kinase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1321 (470.1 bits), Expect = 1.9e-138, Sum P(2) = 1.9e-138
Identities = 262/388 (67%), Positives = 313/388 (80%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
LEEA+ VG LRS+R+ANL+G C E ERLLVAEFMPNETLAKHLFHW+T+PMKWAMRLRV
Sbjct: 98 LEEARLVGQLRSKRMANLLGYCCEGGERLLVAEFMPNETLAKHLFHWDTEPMKWAMRLRV 157
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP 152
ALY+++ALEYCS+ G LYHDLNAYR+LFD++ NPRLS+FGLMKNSRDGKSYSTNLAFTP
Sbjct: 158 ALYISEALEYCSNNGHTLYHDLNAYRVLFDEECNPRLSTFGLMKNSRDGKSYSTNLAFTP 217
Query: 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 212
PEY+RTGR+T ESV+YSFGT+LLDLL+GKHIPPSHALDLIR +N L DS LEG FS+
Sbjct: 218 PEYLRTGRITAESVIYSFGTLLLDLLTGKHIPPSHALDLIRDRNLQTLTDSCLEGQFSDS 277
Query: 213 EGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEVPSYVLLGIQHETAPSTKPLSL 272
+GTELVRL S CLQ EARERPN KSLV +L+SLQK+ EV S+VL+G+ ++ P
Sbjct: 278 DGTELVRLTSCCLQYEARERPNIKSLVTALISLQKDTEVLSHVLMGLPQSGTFASPP--- 334
Query: 273 TPLGEACSRLDLTAIHEILEGMGYKDDEGIANELSFQMWTSQMQETLNSKKHGDTAFRAK 332
+P EACS DLT++ EILE +GYKDDE +LSF MWT QMQE +NSKK GD AFR K
Sbjct: 335 SPFAEACSGKDLTSMVEILEKIGYKDDE----DLSF-MWTEQMQEAINSKKKGDIAFRRK 389
Query: 333 DFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYL 392
DFS AI+ YTQF+D G M+S TV RR SYLM++M +EAL DAM+AQ +SP W ALYL
Sbjct: 390 DFSEAIEFYTQFLDLG-MISATVLVRRSQSYLMSNMAKEALDDAMKAQGISPVWYVALYL 448
Query: 393 QAACLFSLGMENDARETLKDGTNLEAKK 420
Q+A L LGME +++ L +G+ LEA+K
Sbjct: 449 QSAALSVLGMEKESQIALTEGSILEARK 476
|
|
| TAIR|locus:2083499 BSK9 "brassinosteroid-signaling kinase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1321 (470.1 bits), Expect = 7.7e-135, P = 7.7e-135
Identities = 258/391 (65%), Positives = 309/391 (79%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
+EEA+AVG RSE +ANLIGCC E ERLLVAE+MPNETLAKHLFHWE +PMKW MRLRV
Sbjct: 86 IEEAQAVGRCRSEHMANLIGCCSEGHERLLVAEYMPNETLAKHLFHWEKRPMKWEMRLRV 145
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP 152
AL+ A ALEYC+ G LYHDLN YRILFDK GNPRLS FGLMK SR+GKSYSTNLAF P
Sbjct: 146 ALHTATALEYCNDWGIDLYHDLNTYRILFDKVGNPRLSCFGLMKCSREGKSYSTNLAFAP 205
Query: 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 212
PEY+R G V PESV +SFGT+LLDL+SG+HIPP+HALDL R KN+L+LMDSAL+G FS++
Sbjct: 206 PEYLRLGTVIPESVTFSFGTLLLDLMSGRHIPPNHALDLFRGKNYLVLMDSALDGQFSDE 265
Query: 213 EGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEV-PSYVLLGIQHE--TAPSTK- 268
+ TEL+ LASRCL+ E ERP+ K L+ +L L+K AE+ P+ I T P+TK
Sbjct: 266 DRTELIHLASRCLRPEPDERPSIKFLMSALSRLEKRAELWPNVKEENIPTPSYTEPATKE 325
Query: 269 PLSLTPLGEACSRLDLTAIHEILEGMGY-KDDEGIANELSFQMWTSQMQETLNSKKHGDT 327
PL LTP GEAC R+DL+ +HE+LE +GY +DD + NE SFQMWT QMQE ++ KKHGD
Sbjct: 326 PLPLTPFGEACWRVDLSGMHELLEKLGYGEDDVVVTNEFSFQMWTGQMQENMDYKKHGDA 385
Query: 328 AFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWP 387
AFRAKDF TAI+ YT+F+ G +VSPTV ARRCL YLM+DM +EAL DAMQ QV SP++
Sbjct: 386 AFRAKDFETAIEFYTEFMSGAPVVSPTVLARRCLCYLMSDMFREALSDAMQTQVASPEFS 445
Query: 388 TALYLQAACLFSLGMENDARETLKDGTNLEA 418
ALYLQAACL LGME +A+E L+ G++LEA
Sbjct: 446 IALYLQAACLLKLGMEAEAKEALRHGSSLEA 476
|
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| TAIR|locus:2150074 BSK10 "brassinosteroid-signaling kinase 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1298 (462.0 bits), Expect = 2.1e-132, P = 2.1e-132
Identities = 247/394 (62%), Positives = 305/394 (77%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
+ EA+AVG LRSE +ANLIGCC + +ERLLVAE+MPN TLAKHLFHWE +PMKW MRL+V
Sbjct: 105 INEAQAVGRLRSEHMANLIGCCCDDNERLLVAEYMPNGTLAKHLFHWEKRPMKWEMRLKV 164
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP 152
AL+ A+ALEYC+ KG LYHDLN YRI+FDK G P+LS FGLMKNS +GK YSTNLAF P
Sbjct: 165 ALHTARALEYCNDKGIDLYHDLNPYRIMFDKTGIPKLSCFGLMKNSHEGKIYSTNLAFAP 224
Query: 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 212
PEY+R G V ESV +SFGT+LLDL+SG+HIPP+HALDL R KN+L+LMDSAL+G FS++
Sbjct: 225 PEYLRLGTVIAESVTFSFGTLLLDLMSGRHIPPNHALDLFRGKNYLVLMDSALDGQFSDE 284
Query: 213 EGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEV-PSYVLL-------GIQHETA 264
+ TEL+ +ASRC ++E ERP+ K L +L LQK A++ P V + +T
Sbjct: 285 DRTELIHVASRCFKTEPEERPSIKFLKATLSRLQKRAKLCPINVKRPMSPPSKNLPEKTK 344
Query: 265 PSTKPLSLTPLGEACSRLDLTAIHEILEGMGYKDDEGIANELSFQMWTSQMQETLNSKKH 324
P+T+ L LTP G+ACSR DL++IHE+LE +GY++D G+ NE SFQMWT +MQE ++ KKH
Sbjct: 345 PATESLKLTPFGDACSRADLSSIHELLEKLGYEEDNGVGNEFSFQMWTGEMQENMDYKKH 404
Query: 325 GDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSP 384
GD AF AKDF TAI+ YT+F+ G VSPTV ARRCL YLM +M EAL DAMQAQV SP
Sbjct: 405 GDAAFLAKDFDTAIEFYTEFMTGAPTVSPTVLARRCLCYLMTEMFSEALSDAMQAQVASP 464
Query: 385 DWPTALYLQAACLFSLGMENDARETLKDGTNLEA 418
+WP LYLQAACLF L ME +A+E L+ G+ LEA
Sbjct: 465 EWPIPLYLQAACLFKLEMEAEAKEALRHGSALEA 498
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| TAIR|locus:2142315 BSK2 "brassinosteroid-signaling kinase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1286 (457.8 bits), Expect = 3.9e-131, P = 3.9e-131
Identities = 239/389 (61%), Positives = 307/389 (78%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVAL 94
EA VG LR++R+ +LIGCC E DERLLVAE+MPN+TL+KHLFHWE QP+ W MR+R+A
Sbjct: 100 EATGVGKLRNKRIVSLIGCCAEGDERLLVAEYMPNDTLSKHLFHWEKQPLPWDMRVRIAD 159
Query: 95 YLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPE 154
Y+A+AL+YC+ + R +YHDLNAYRILFD++G+PRLS+FGLMKNSRDGKSYSTNLA+TPPE
Sbjct: 160 YIAEALDYCNIENRKIYHDLNAYRILFDEEGDPRLSTFGLMKNSRDGKSYSTNLAYTPPE 219
Query: 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEG 214
++RTGRV PESV++S+GT+LLDLLSGKHIPPSHALD+IR KN LLLMDS+LEG ++ND+
Sbjct: 220 FLRTGRVIPESVIFSYGTILLDLLSGKHIPPSHALDIIRGKNALLLMDSSLEGQYANDDA 279
Query: 215 TELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEVPSYVLLGIQHETAPSTKPLSLTP 274
T+LV LAS+CLQSEA++RP+ K L+ ++ LQK+ EV S+VL+G+ T P L+P
Sbjct: 280 TKLVDLASKCLQSEAKDRPDTKFLLSAVAPLQKQEEVASHVLMGLPKNTV--ILPTMLSP 337
Query: 275 LGEACSRLDLTAIHEILEGMGYKDDEGIANELSFQMWTSQMQETLNSKKHGDTAFRAKDF 334
LG+AC+++DL H+IL GY+D+EG NELSFQ WT Q+QE LN+KK GD AFR KDF
Sbjct: 338 LGKACAKMDLATFHDILLKTGYRDEEGAENELSFQEWTQQVQEMLNTKKFGDIAFRDKDF 397
Query: 335 STAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQA 394
+I+ Y++ + + S TV+ARR SYLM D + AL DAMQAQV P+WPTA YLQA
Sbjct: 398 KNSIEYYSKLVGMMPVPSATVFARRAFSYLMTDQQELALRDAMQAQVCIPEWPTAFYLQA 457
Query: 395 ACLFSLGMENDARETLKDGTNLEAKKNKN 423
L LGME DA++ L DG +AK+ +
Sbjct: 458 LALSKLGMETDAQDMLNDGAAYDAKRQNS 486
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.7.11 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | estExt_Genewise1_v1.C_LG_XVI3355 | hypothetical protein (491 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 423 | |||
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 2e-22 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 8e-19 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 4e-18 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 5e-17 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 5e-17 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 1e-15 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 8e-13 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 2e-12 | |
| cd05083 | 254 | cd05083, PTKc_Chk, Catalytic domain of the Protein | 5e-12 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 3e-11 | |
| cd05080 | 283 | cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma | 3e-10 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 3e-10 | |
| cd05113 | 256 | cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro | 5e-10 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 2e-09 | |
| cd05059 | 256 | cd05059, PTKc_Tec_like, Catalytic domain of Tec-li | 5e-09 | |
| cd05082 | 256 | cd05082, PTKc_Csk, Catalytic domain of the Protein | 1e-08 | |
| cd05123 | 250 | cd05123, STKc_AGC, Catalytic domain of AGC family | 1e-08 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 2e-08 | |
| cd05084 | 252 | cd05084, PTKc_Fes, Catalytic domain of the Protein | 2e-08 | |
| cd05085 | 250 | cd05085, PTKc_Fer, Catalytic domain of the Protein | 2e-08 | |
| cd08529 | 256 | cd08529, STKc_FA2-like, Catalytic domain of the Pr | 7e-08 | |
| cd05068 | 261 | cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re | 1e-07 | |
| cd05114 | 256 | cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro | 2e-07 | |
| cd05049 | 280 | cd05049, PTKc_Trk, Catalytic domain of the Protein | 2e-07 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 3e-07 | |
| cd05069 | 260 | cd05069, PTKc_Yes, Catalytic domain of the Protein | 4e-07 | |
| cd08217 | 265 | cd08217, STKc_Nek2, Catalytic domain of the Protei | 4e-07 | |
| cd05071 | 262 | cd05071, PTKc_Src, Catalytic domain of the Protein | 5e-07 | |
| cd05112 | 256 | cd05112, PTKc_Itk, Catalytic domain of the Protein | 6e-07 | |
| cd05078 | 258 | cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat | 7e-07 | |
| cd05590 | 320 | cd05590, STKc_nPKC_eta, Catalytic domain of the Pr | 9e-07 | |
| cd06632 | 258 | cd06632, STKc_MEKK1_plant, Catalytic domain of the | 1e-06 | |
| cd05070 | 260 | cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro | 1e-06 | |
| cd05579 | 265 | cd05579, STKc_MAST_like, Catalytic domain of Micro | 2e-06 | |
| cd05093 | 288 | cd05093, PTKc_TrkB, Catalytic domain of the Protei | 2e-06 | |
| cd05033 | 266 | cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec | 2e-06 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 2e-06 | |
| cd05072 | 261 | cd05072, PTKc_Lyn, Catalytic domain of the Protein | 3e-06 | |
| cd05034 | 261 | cd05034, PTKc_Src_like, Catalytic domain of Src ki | 3e-06 | |
| cd06654 | 296 | cd06654, STKc_PAK1, Catalytic domain of the Protei | 5e-06 | |
| cd05036 | 277 | cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro | 5e-06 | |
| cd06610 | 267 | cd06610, STKc_OSR1_SPAK, Catalytic domain of the P | 7e-06 | |
| cd05619 | 316 | cd05619, STKc_nPKC_theta, Catalytic domain of the | 7e-06 | |
| cd05096 | 304 | cd05096, PTKc_DDR1, Catalytic domain of the Protei | 7e-06 | |
| cd05052 | 263 | cd05052, PTKc_Abl, Catalytic domain of the Protein | 7e-06 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 7e-06 | |
| cd06657 | 292 | cd06657, STKc_PAK4, Catalytic domain of the Protei | 8e-06 | |
| cd05067 | 260 | cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro | 9e-06 | |
| cd05075 | 272 | cd05075, PTKc_Axl, Catalytic domain of the Protein | 1e-05 | |
| cd05048 | 283 | cd05048, PTKc_Ror, Catalytic Domain of the Protein | 1e-05 | |
| cd05577 | 277 | cd05577, STKc_GRK, Catalytic domain of the Protein | 1e-05 | |
| cd05079 | 284 | cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma | 2e-05 | |
| cd05583 | 288 | cd05583, STKc_MSK_N, N-terminal catalytic domain o | 2e-05 | |
| cd06642 | 277 | cd06642, STKc_STK25-YSK1, Catalytic domain of the | 2e-05 | |
| cd05098 | 307 | cd05098, PTKc_FGFR1, Catalytic domain of the Prote | 2e-05 | |
| cd05620 | 316 | cd05620, STKc_nPKC_delta, Catalytic domain of the | 2e-05 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 2e-05 | |
| cd05040 | 257 | cd05040, PTKc_Ack_like, Catalytic domain of the Pr | 2e-05 | |
| cd06614 | 286 | cd06614, STKc_PAK, Catalytic domain of the Protein | 2e-05 | |
| cd06623 | 264 | cd06623, PKc_MAPKK_plant_like, Catalytic domain of | 3e-05 | |
| cd06656 | 297 | cd06656, STKc_PAK3, Catalytic domain of the Protei | 4e-05 | |
| cd05582 | 318 | cd05582, STKc_RSK_N, N-terminal catalytic domain o | 4e-05 | |
| cd05097 | 295 | cd05097, PTKc_DDR_like, Catalytic domain of Discoi | 4e-05 | |
| cd05094 | 291 | cd05094, PTKc_TrkC, Catalytic domain of the Protei | 5e-05 | |
| cd00189 | 100 | cd00189, TPR, Tetratricopeptide repeat domain; typ | 6e-05 | |
| cd05608 | 280 | cd05608, STKc_GRK1, Catalytic domain of the Protei | 7e-05 | |
| cd05630 | 285 | cd05630, STKc_GRK6, Catalytic domain of the Protei | 7e-05 | |
| cd05073 | 260 | cd05073, PTKc_Hck, Catalytic domain of the Protein | 8e-05 | |
| cd05058 | 262 | cd05058, PTKc_Met_Ron, Catalytic domain of the Pro | 8e-05 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 9e-05 | |
| cd06648 | 285 | cd06648, STKc_PAK_II, Catalytic domain of the Prot | 9e-05 | |
| cd06641 | 277 | cd06641, STKc_MST3, Catalytic domain of the Protei | 9e-05 | |
| cd06647 | 293 | cd06647, STKc_PAK_I, Catalytic domain of the Prote | 1e-04 | |
| cd05592 | 316 | cd05592, STKc_nPKC_theta_delta, Catalytic domain o | 1e-04 | |
| cd06651 | 266 | cd06651, STKc_MEKK3, Catalytic domain of the Prote | 1e-04 | |
| cd05100 | 334 | cd05100, PTKc_FGFR3, Catalytic domain of the Prote | 1e-04 | |
| cd06917 | 277 | cd06917, STKc_NAK1_like, Catalytic domain of Funga | 2e-04 | |
| cd05044 | 269 | cd05044, PTKc_c-ros, Catalytic domain of the Prote | 2e-04 | |
| cd05064 | 266 | cd05064, PTKc_EphR_A10, Catalytic domain of the Pr | 2e-04 | |
| cd06658 | 292 | cd06658, STKc_PAK5, Catalytic domain of the Protei | 2e-04 | |
| cd06611 | 280 | cd06611, STKc_SLK_like, Catalytic domain of Ste20- | 4e-04 | |
| cd05095 | 296 | cd05095, PTKc_DDR2, Catalytic domain of the Protei | 4e-04 | |
| cd05632 | 285 | cd05632, STKc_GRK5, Catalytic domain of the Protei | 4e-04 | |
| cd06649 | 331 | cd06649, PKc_MEK2, Catalytic domain of the dual-sp | 5e-04 | |
| cd06630 | 268 | cd06630, STKc_MEKK1, Catalytic domain of the Prote | 5e-04 | |
| cd05081 | 284 | cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) | 6e-04 | |
| cd05612 | 291 | cd05612, STKc_PRKX_like, Catalytic domain of PRKX- | 6e-04 | |
| cd05045 | 290 | cd05045, PTKc_RET, Catalytic domain of the Protein | 7e-04 | |
| cd05621 | 370 | cd05621, STKc_ROCK2, Catalytic domain of the Prote | 8e-04 | |
| cd05617 | 327 | cd05617, STKc_aPKC_zeta, Catalytic domain of the P | 9e-04 | |
| pfam13414 | 69 | pfam13414, TPR_11, TPR repeat | 0.001 | |
| cd05053 | 293 | cd05053, PTKc_FGFR, Catalytic domain of the Protei | 0.001 | |
| cd06617 | 283 | cd06617, PKc_MKK3_6, Catalytic domain of the dual- | 0.001 | |
| cd05090 | 283 | cd05090, PTKc_Ror1, Catalytic domain of the Protei | 0.001 | |
| cd05061 | 288 | cd05061, PTKc_InsR, Catalytic domain of the Protei | 0.001 | |
| cd05575 | 323 | cd05575, STKc_SGK, Catalytic domain of the Protein | 0.001 | |
| cd05056 | 270 | cd05056, PTKc_FAK, Catalytic domain of the Protein | 0.001 | |
| cd05611 | 260 | cd05611, STKc_Rim15_like, Catalytic domain of fung | 0.001 | |
| cd06650 | 333 | cd06650, PKc_MEK1, Catalytic domain of the dual-sp | 0.001 | |
| cd06629 | 272 | cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o | 0.001 | |
| cd05588 | 329 | cd05588, STKc_aPKC, Catalytic domain of the Protei | 0.001 | |
| cd05593 | 328 | cd05593, STKc_PKB_gamma, Catalytic domain of the P | 0.001 | |
| cd07864 | 302 | cd07864, STKc_CDK12, Catalytic domain of the Serin | 0.001 | |
| cd06628 | 267 | cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o | 0.001 | |
| cd05605 | 285 | cd05605, STKc_GRK4_like, Catalytic domain of G pro | 0.001 | |
| cd05110 | 303 | cd05110, PTKc_HER4, Catalytic domain of the Protei | 0.002 | |
| cd05622 | 371 | cd05622, STKc_ROCK1, Catalytic domain of the Prote | 0.002 | |
| cd06605 | 265 | cd06605, PKc_MAPKK, Catalytic domain of the dual-s | 0.002 | |
| cd05591 | 321 | cd05591, STKc_nPKC_epsilon, Catalytic domain of th | 0.002 | |
| cd05570 | 318 | cd05570, STKc_PKC, Catalytic domain of the Protein | 0.002 | |
| cd05584 | 323 | cd05584, STKc_p70S6K, Catalytic domain of the Prot | 0.002 | |
| cd05060 | 257 | cd05060, PTKc_Syk_like, Catalytic domain of Spleen | 0.002 | |
| cd05581 | 280 | cd05581, STKc_PDK1, Catalytic domain of the Protei | 0.002 | |
| cd05618 | 329 | cd05618, STKc_aPKC_iota, Catalytic domain of the P | 0.002 | |
| cd05604 | 325 | cd05604, STKc_SGK3, Catalytic domain of the Protei | 0.003 | |
| cd05594 | 325 | cd05594, STKc_PKB_alpha, Catalytic domain of the P | 0.003 | |
| cd06615 | 308 | cd06615, PKc_MEK, Catalytic domain of the dual-spe | 0.003 | |
| cd05616 | 323 | cd05616, STKc_cPKC_beta, Catalytic domain of the P | 0.003 | |
| cd05099 | 314 | cd05099, PTKc_FGFR4, Catalytic domain of the Prote | 0.003 | |
| cd05063 | 268 | cd05063, PTKc_EphR_A2, Catalytic domain of the Pro | 0.003 | |
| cd06612 | 256 | cd06612, STKc_MST1_2, Catalytic domain of the Prot | 0.003 | |
| PHA02988 | 283 | PHA02988, PHA02988, hypothetical protein; Provisio | 0.003 | |
| cd06618 | 296 | cd06618, PKc_MKK7, Catalytic domain of the dual-sp | 0.004 | |
| cd05057 | 279 | cd05057, PTKc_EGFR_like, Catalytic domain of Epide | 0.004 | |
| cd05062 | 277 | cd05062, PTKc_IGF-1R, Catalytic domain of the Prot | 0.004 | |
| cd05092 | 280 | cd05092, PTKc_TrkA, Catalytic domain of the Protei | 0.004 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 94.2 bits (235), Expect = 2e-22
Identities = 56/230 (24%), Positives = 85/230 (36%), Gaps = 47/230 (20%)
Query: 17 LKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76
+K E S L E + + L + L G + + LV E+ +L L
Sbjct: 23 IKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKDLL 82
Query: 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYH-DLNAYRILFDKD-GNPRLSSFGL 134
E + LR+ L + + LEY S G + H DL IL D D G +L+ FGL
Sbjct: 83 KENE-GKLSEDEILRILLQILEGLEYLHSNG--IIHRDLKPENILLDSDNGKVKLADFGL 139
Query: 135 MKNSRDGKSYST----NLAFTPPE-YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHAL 189
K KS A+ PE + G + +S ++S G +L +L
Sbjct: 140 SKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL--------PELK 191
Query: 190 DLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239
DLIR + LQ + +RP+AK ++
Sbjct: 192 DLIR-----------------------------KMLQKDPEKRPSAKEIL 212
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 85.3 bits (212), Expect = 8e-19
Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 22/221 (9%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L EA+ + L + L+G C E + ++V E+MP L +L + + + L
Sbjct: 49 LREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEYMPGGDLLDYLRKNRPKELSLSDLLSF 108
Query: 93 ALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLA-- 149
AL +A+ +EY SK H DL A L ++ ++S FGL ++ D Y
Sbjct: 109 ALQIARGMEYLESKN--FIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKVKGGKL 166
Query: 150 ---FTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GK----HIPPSHALDLIRSKNFLLLM 201
+ PE ++ G+ T +S V+SFG +L ++ + G+ + + L+ ++ L
Sbjct: 167 PIRWMAPESLKEGKFTSKSDVWSFGVLLWEIFTLGEEPYPGMSNAEVLEYLKKGYRLPKP 226
Query: 202 DSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISL 242
+ EL +L +C + +RP LV L
Sbjct: 227 PNCPP---------ELYKLMLQCWAEDPEDRPTFSELVEIL 258
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 83.3 bits (207), Expect = 4e-18
Identities = 54/221 (24%), Positives = 93/221 (42%), Gaps = 23/221 (10%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L EA+ + L + L+G C E + +V E+M L +L + + L
Sbjct: 49 LREARIMRKLDHPNVVKLLGVCTEEEPLYIVMEYMEGGDLLSYL-RKNRPKLSLSDLLSF 107
Query: 93 ALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLA-- 149
AL +A+ +EY SK H DL A L ++ ++S FGL ++ D Y
Sbjct: 108 ALQIARGMEYLESKN--FIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYRKRGGKL 165
Query: 150 ---FTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GK----HIPPSHALDLIRSKNFLLLM 201
+ PE ++ G+ T +S V+SFG +L ++ + G+ + L+ +++ L
Sbjct: 166 PIRWMAPESLKEGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLEYLKNGYRLPQP 225
Query: 202 DSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISL 242
+ EL L +C + +RP LV L
Sbjct: 226 PNCPP---------ELYDLMLQCWAEDPEDRPTFSELVEIL 257
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 80.0 bits (198), Expect = 5e-17
Identities = 57/216 (26%), Positives = 91/216 (42%), Gaps = 13/216 (6%)
Query: 32 NLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLR 91
E + + L + LI + D LV E+ L +L P+ +
Sbjct: 45 ARREIRILRRLSHPNIVRLIDAFEDKDHLYLVMEYCEGGDLFDYLS--RGGPLSEDEAKK 102
Query: 92 VALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAF 150
+AL + + LEY S G + H DL IL D++G +++ FGL K S T
Sbjct: 103 IALQILRGLEYLHSNG--IIHRDLKPENILLDENGVVKIADFGLAKKLLKSSSSLTTFVG 160
Query: 151 TP----PEYMRTGR-VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSAL 205
TP PE + G P+ V+S G +L +LL+GK P S L + + ++ L
Sbjct: 161 TPWYMAPEVLLGGNGYGPKVDVWSLGVILYELLTGKP-PFSGENILDQLQLIRRILGPPL 219
Query: 206 EGHF--SNDEGTELVRLASRCLQSEARERPNAKSLV 239
E + E L +CL + +RP A+ ++
Sbjct: 220 EFDEPKWSSGSEEAKDLIKKCLNKDPSKRPTAEEIL 255
|
Length = 260 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 79.9 bits (198), Expect = 5e-17
Identities = 57/228 (25%), Positives = 96/228 (42%), Gaps = 28/228 (12%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL-------FHWETQPMK 85
L+EA+ + L + L+G C E + LV E+M L +L E +
Sbjct: 44 LKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLS 103
Query: 86 WAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYS 145
L A+ +A+ +EY +SK + ++ DL A L +D ++S FGL ++ D Y
Sbjct: 104 LKDLLSFAIQIAKGMEYLASK-KFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYR 162
Query: 146 TN------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKH----IPPSHALDLIRS 194
+ + PE ++ G T +S V+SFG +L ++ + G + L+ +R
Sbjct: 163 KKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRK 222
Query: 195 KNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISL 242
L + + EL L C Q + +RP LV L
Sbjct: 223 GYRLPKPEYCPD---------ELYELMLSCWQLDPEDRPTFSELVERL 261
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 76.0 bits (188), Expect = 1e-15
Identities = 55/222 (24%), Positives = 93/222 (41%), Gaps = 24/222 (10%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
LEEA + L + L+G C + + +V E+MP L L + + L++
Sbjct: 49 LEEASIMKKLSHPNIVRLLGVCTQGEPLYIVTEYMPGGDLLDFL-RKHGEKLTLKDLLQM 107
Query: 93 ALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKN-SRDGKSYSTNLAF 150
AL +A+ +EY SK H DL A L ++ ++S FGL ++ D
Sbjct: 108 ALQIAKGMEYLESKN--FVHRDLAARNCLVTENLVVKISDFGLSRDIYEDDYYRKRGGGK 165
Query: 151 TP-----PEYMRTGRVTPESVVYSFGTMLLDLLSG-----KHIPPSHALDLIRSKNFLLL 200
P PE ++ G+ T +S V+SFG +L ++ + + L+L+ L
Sbjct: 166 LPIKWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLELLEDGYRLPR 225
Query: 201 MDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISL 242
++ + EL L +C + +RP LV L
Sbjct: 226 PENCPD---------ELYELMLQCWAYDPEDRPTFSELVEDL 258
|
Length = 258 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 67.8 bits (166), Expect = 8e-13
Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 2/153 (1%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L EA + LR L L+G + + +V E+M +L +L + A +L
Sbjct: 48 LAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGF 107
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSYSTNLAFT 151
AL + + +EY K ++ DL A +L +D ++S FGL K + G S + +T
Sbjct: 108 ALDVCEGMEYLEEK-NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLPVKWT 166
Query: 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
PE +R + + +S V+SFG +L ++ S +P
Sbjct: 167 APEALREKKFSTKSDVWSFGILLWEIYSFGRVP 199
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 66.0 bits (162), Expect = 2e-12
Identities = 51/217 (23%), Positives = 80/217 (36%), Gaps = 24/217 (11%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L E K + L+ + L + D+ LV E+ L L A
Sbjct: 45 LREIKILKKLKHPNIVRLYDVFEDEDKLYLVMEYCEGGDLFDLLKKRGRLSEDEA--RFY 102
Query: 93 ALYLAQALEYCSSKGRALYHDL---NAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN-- 147
+ ALEY SKG ++ DL N IL D+DG+ +L+ FGL + G+ +T
Sbjct: 103 LRQILSALEYLHSKGI-VHRDLKPEN---ILLDEDGHVKLADFGLARQLDPGEKLTTFVG 158
Query: 148 -LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGK-----HIPPSHALDLIRSKNFLLLM 201
+ PE + ++S G +L +LL+GK I
Sbjct: 159 TPEYMAPEVLLGKGYGKAVDIWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPP 218
Query: 202 DSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
E S E +L+R + L + +R A+
Sbjct: 219 P---EWDIS-PEAKDLIR---KLLVKDPEKRLTAEEA 248
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Score = 65.4 bits (159), Expect = 5e-12
Identities = 53/222 (23%), Positives = 99/222 (44%), Gaps = 20/222 (9%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
LEE + L + L L+G + +V E M L L + L+
Sbjct: 47 LEETAVMTKLHHKNLVRLLGVILH-NGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQF 105
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-NSRDGKSYSTNLAFT 151
+L +A+ +EY SK + ++ DL A IL +DG ++S FGL + S + + +T
Sbjct: 106 SLDVAEGMEYLESK-KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKLPVKWT 164
Query: 152 PPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFS 210
PE ++ + + +S V+S+G +L ++ S G+ P +L ++ +E +
Sbjct: 165 APEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVK---------ECVEKGYR 215
Query: 211 NDEGTE----LVRLASRCLQSEARERPNAKSLVISLMSLQKE 248
+ + L + C ++E ++RP+ L L+KE
Sbjct: 216 MEPPEGCPADVYVLMTSCWETEPKKRPSFHKLR---EKLEKE 254
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 63.2 bits (154), Expect = 3e-11
Identities = 55/225 (24%), Positives = 97/225 (43%), Gaps = 35/225 (15%)
Query: 41 NLRSERLANLIGCCYEADER--LLVAEFMPNETLAKHL-FHWETQPMKWAMRLRVALYLA 97
L E + G C + R L+ E++P+ +L +L H + +K L + +
Sbjct: 62 TLDHENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLK--RLLLFSSQIC 119
Query: 98 QALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK--NSRDGKSYSTNLAFTP--- 152
+ ++Y S+ R ++ DL A IL + + ++S FGL K Y +P
Sbjct: 120 KGMDYLGSQ-RYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFW 178
Query: 153 --PEYMRTGRVTPESVVYSFGTMLLDLLS-GKH--IPPSHALDLI---RSKNFLLLMDSA 204
PE +RT + + S V+SFG L +L + G PP+ L +I + + + +
Sbjct: 179 YAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLEL 238
Query: 205 LEGHFSNDEGTELVR----------LASRCLQSEARERPNAKSLV 239
L+ EG L R L C ++E ++RP+ L+
Sbjct: 239 LK------EGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLI 277
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 60.3 bits (146), Expect = 3e-10
Identities = 54/231 (23%), Positives = 98/231 (42%), Gaps = 23/231 (9%)
Query: 34 EEAKAVGNLRSERLANLIGCCYEADER--LLVAEFMPNETLAKHLFHWETQPMKWAMRLR 91
+E + L E + GCC E + L+ E++P +L +L + A L
Sbjct: 55 KEINILKTLYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYL---PKHKLNLAQLLL 111
Query: 92 VALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY------- 144
A + + + Y S+ ++ DL A +L D D ++ FGL K +G Y
Sbjct: 112 FAQQICEGMAYLHSQ-HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDG 170
Query: 145 STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS---GKHIPPSHALDLIRSKNFLL-- 199
+ + + E ++ + + S V+SFG L +LL+ K PP ++I K +
Sbjct: 171 DSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTV 230
Query: 200 -----LMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 245
L++ + + E+ L C ++EA+ RP +SL+ L +
Sbjct: 231 VRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEM 281
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 59.8 bits (145), Expect = 3e-10
Identities = 43/159 (27%), Positives = 74/159 (46%), Gaps = 10/159 (6%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EA+ + + LIG C + +V E +P +L L + + + L++
Sbjct: 40 LQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKKKNR-LTVKKLLQM 98
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN----- 147
+L A +EY SK ++ DL A L ++ ++S FG M +G Y+ +
Sbjct: 99 SLDAAAGMEYLESKN-CIHRDLAARNCLVGENNVLKISDFG-MSREEEGGIYTVSDGLKQ 156
Query: 148 --LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
+ +T PE + GR T ES V+S+G +L + S P
Sbjct: 157 IPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTP 195
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Score = 59.5 bits (144), Expect = 5e-10
Identities = 56/229 (24%), Positives = 99/229 (43%), Gaps = 39/229 (17%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPN----ETLAKHLFHWETQPMKWAM 88
+EEAK + L E+L L G C + +V E+M N L +H ++ +
Sbjct: 47 IEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQL---- 102
Query: 89 RLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYST-- 146
L + + + + Y SK + ++ DL A L D G ++S FGL + D + S+
Sbjct: 103 -LEMCKDVCEGMAYLESK-QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVG 160
Query: 147 ---NLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 203
+ ++PPE + + + +S V++FG ++ ++ S +P + +S
Sbjct: 161 SKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMP------------YERFNNS 208
Query: 204 ALEGHFSNDEGTELVR--LASR--------CLQSEARERPNAKSLVISL 242
S +G L R LAS C +A ERP + L+ S+
Sbjct: 209 ETVEKVS--QGLRLYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSI 255
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 59.0 bits (141), Expect = 2e-09
Identities = 66/322 (20%), Positives = 109/322 (33%), Gaps = 30/322 (9%)
Query: 33 LEEAKAVGNLRSE-RLANLIGCCYEADERLLVAEFMPNETLAKHL-FHWETQPMKWAMRL 90
L E + + +L + L + LV E++ +L L P+ + L
Sbjct: 45 LREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEAL 104
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGN-PRLSSFGLMKNSRDGKSYSTN-- 147
+ + ALEY SKG ++ D+ IL D+DG +L FGL K D S S+
Sbjct: 105 FILAQILSALEYLHSKG-IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPA 163
Query: 148 --------LAFTPPEY---MRTGRVTPESVVYSFGTMLLDLLSGKH--------IPPSHA 188
+ PE + + S ++S G L +LL+G S
Sbjct: 164 LPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQT 223
Query: 189 LDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248
L +I L S L L + L + + R ++ S + L
Sbjct: 224 LKIILELPTPSL-ASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH--DLLAH 280
Query: 249 AEVPSYVLLGIQHETAPSTKPLSLTPLGEACSRLDLTAIHEILEGMGYKDDEGIANELSF 308
++ L + + LSL P EA I DD + EL+
Sbjct: 281 LKLKESDLSDLLKPDDSAPLRLSLPPSLEALIS--SLNSLAISGSDLKLDDSNFSKELAP 338
Query: 309 QMWTSQMQETLNSKKHGDTAFR 330
+S + + ++ R
Sbjct: 339 NGVSSSPHNSSSLLLSTASSKR 360
|
Length = 384 |
| >gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 56.3 bits (136), Expect = 5e-09
Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 11/159 (6%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMR--L 90
+EEAK + L L L G C + +V E+M N L +L + K L
Sbjct: 47 IEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYL---RERKGKLGTEWLL 103
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN--- 147
+ + +A+EY S G ++ DL A L +D ++S FGL + D + S+
Sbjct: 104 DMCSDVCEAMEYLESNG-FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTK 162
Query: 148 --LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
+ + PPE R + +S V+SFG ++ ++ S +P
Sbjct: 163 FPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMP 201
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256 |
| >gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Score = 55.4 bits (133), Expect = 1e-08
Identities = 42/154 (27%), Positives = 74/154 (48%), Gaps = 3/154 (1%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERL-LVAEFMPNETLAKHLFHWETQPMKWAMRLR 91
L EA + LR L L+G E L +V E+M +L +L + L+
Sbjct: 47 LAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLK 106
Query: 92 VALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYST-NLAF 150
+L + +A+EY + ++ DL A +L +D ++S FGL K + + + +
Sbjct: 107 FSLDVCEAMEYLEANN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKW 165
Query: 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
T PE +R + + +S V+SFG +L ++ S +P
Sbjct: 166 TAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 199
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256 |
| >gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 54.8 bits (133), Expect = 1e-08
Identities = 60/219 (27%), Positives = 90/219 (41%), Gaps = 31/219 (14%)
Query: 32 NLEEAKAVGNLRSER----------LANLIGCCYEADERL-LVAEFMPNETLAKHLFHWE 80
+ + K V + +ER + L ++ +E+L LV E+ P L HL
Sbjct: 30 KIIKRKEVEHTLTERNILSRINHPFIVKLH-YAFQTEEKLYLVLEYAPGGELFSHLSKEG 88
Query: 81 TQPMKWAMRLRVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKN 137
+ A Y A+ ALEY S G +Y DL IL D DG+ +L+ FGL K
Sbjct: 89 RFSEERA-----RFYAAEIVLALEYLHSLG-IIYRDLKPENILLDADGHIKLTDFGLAKE 142
Query: 138 SRDGKSYSTNLAFTP----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIR 193
S + TP PE + +S G +L ++L+GK PP +A D R
Sbjct: 143 LSSEGSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGK--PPFYAED--R 198
Query: 194 SKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232
+ + ++ L F E L S LQ + +R
Sbjct: 199 KEIYEKILKDPLR--FPEFLSPEARDLISGLLQKDPTKR 235
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 54.9 bits (133), Expect = 2e-08
Identities = 50/216 (23%), Positives = 85/216 (39%), Gaps = 20/216 (9%)
Query: 32 NLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLR 91
+ E + + + + G + DE +V EF +L K L Q + +
Sbjct: 44 IINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGGSL-KDLLKSTNQTLTESQIAY 102
Query: 92 VALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL---MKNSRDGKSYSTNL 148
V L + LEY S G ++ D+ A IL DG +L FGL + +++ +
Sbjct: 103 VCKELLKGLEYLHSNGI-IHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMVGTP 161
Query: 149 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSH------ALDLIRSKNFLLLMD 202
+ PE + ++ ++S G ++L GK PP AL I + L
Sbjct: 162 YWMAPEVINGKPYDYKADIWSLGITAIELAEGK--PPYSELPPMKALFKIATNGPPGL-- 217
Query: 203 SALEGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
+DE + + +CLQ +RP A+ L
Sbjct: 218 --RNPEKWSDEFKDFL---KKCLQKNPEKRPTAEQL 248
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Score = 54.6 bits (131), Expect = 2e-08
Identities = 50/213 (23%), Positives = 85/213 (39%), Gaps = 22/213 (10%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EA+ + + LIG C + +V E + L E +K +++
Sbjct: 41 LQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL-RTEGPRLKVKELIQM 99
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN----- 147
A +EY SK ++ DL A L + ++S FG+ + DG ST
Sbjct: 100 VENAAAGMEYLESK-HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQI 158
Query: 148 -LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP-----PSHALDLIRSKNFLLLM 201
+ +T PE + GR + ES V+SFG +L + S +P + I L
Sbjct: 159 PVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRLPCP 218
Query: 202 DSALEGHFSNDEGTELVRLASRCLQSEARERPN 234
+ + + RL RC + + +RP+
Sbjct: 219 ELCPD---------AVYRLMERCWEYDPGQRPS 242
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252 |
| >gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Score = 54.2 bits (130), Expect = 2e-08
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 7/152 (4%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L EA+ + + LIG C + +V E +P L + +K ++
Sbjct: 40 LSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLSFL-RKKKDELKTKQLVKF 98
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLA--- 149
AL A + Y SK ++ DL A L ++ ++S FG+ + DG S+ L
Sbjct: 99 ALDAAAGMAYLESKN-CIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIP 157
Query: 150 --FTPPEYMRTGRVTPESVVYSFGTMLLDLLS 179
+T PE + GR + ES V+S+G +L + S
Sbjct: 158 IKWTAPEALNYGRYSSESDVWSYGILLWETFS 189
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250 |
| >gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Score = 52.9 bits (127), Expect = 7e-08
Identities = 48/214 (22%), Positives = 89/214 (41%), Gaps = 16/214 (7%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
++EA+ + L S + + + +V E+ N L K L +P+ R
Sbjct: 47 IDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRF 106
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP 152
+ + L + SK + L+ D+ + + D N ++ G+ K D +++ + TP
Sbjct: 107 FIQILLGLAHLHSK-KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANTIVGTP 165
Query: 153 ----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGH 208
PE +S V++ G +L + +GKH P A N L+ + G
Sbjct: 166 YYLSPELCEDKPYNEKSDVWALGVVLYECCTGKH--PFDA------NNQGALILKIIRGV 217
Query: 209 F---SNDEGTELVRLASRCLQSEARERPNAKSLV 239
F S +L +L +CL + R+RP+ L+
Sbjct: 218 FPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLL 251
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256 |
| >gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 52.0 bits (125), Expect = 1e-07
Identities = 40/175 (22%), Positives = 81/175 (46%), Gaps = 15/175 (8%)
Query: 17 LKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76
LK ++ D L EA+ + LR +L L C + +V E M +L ++L
Sbjct: 38 LKPGTMDPKDF-----LAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKYGSLLEYL 92
Query: 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK 136
+ +K + +A +A + Y ++ ++ DL A +L ++ +++ FGL +
Sbjct: 93 QGGAGRALKLPQLIDMAAQVASGMAYLEAQ-NYIHRDLAARNVLVGENNICKVADFGLAR 151
Query: 137 -------NSRDGKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
+R+G + + +T PE R + +S V+SFG +L ++++ +P
Sbjct: 152 VIKEDIYEAREGAKFP--IKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMP 204
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261 |
| >gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Score = 51.4 bits (123), Expect = 2e-07
Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 7/157 (4%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
+EEAK + L +L L G C + +V EFM N L +L + + K M L +
Sbjct: 47 IEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQGKLSK-DMLLSM 105
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLA--- 149
+ + +EY ++ DL A L G ++S FG+ + D + S++ A
Sbjct: 106 CQDVCEGMEYLERNS-FIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAKFP 164
Query: 150 --FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
++PPE + + +S V+SFG ++ ++ + +P
Sbjct: 165 VKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMP 201
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256 |
| >gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Score = 51.7 bits (124), Expect = 2e-07
Identities = 43/171 (25%), Positives = 76/171 (44%), Gaps = 30/171 (17%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL------------FHWETQ 82
EA+ + N + E + G C E D ++V E+M + L K L
Sbjct: 58 EAELLTNFQHENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMG 117
Query: 83 PMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK 142
+ + L++A+ +A + Y +S+ ++ DL L D ++ FG+ SRD
Sbjct: 118 ELTLSQLLQIAVQIASGMVYLASQ-HFVHRDLATRNCLVGYDLVVKIGDFGM---SRD-- 171
Query: 143 SYSTN-----------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GK 181
Y+T+ + + PPE + + T ES V+SFG +L ++ + GK
Sbjct: 172 VYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGK 222
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 52.5 bits (126), Expect = 3e-07
Identities = 56/223 (25%), Positives = 105/223 (47%), Gaps = 28/223 (12%)
Query: 40 GNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQA 99
G L+ + LIG C L+ E++ + L++ L + + W R ++A+ +A+A
Sbjct: 738 GKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVL-----RNLSWERRRKIAIGIAKA 792
Query: 100 LEY--CSSKGRALYHDLNAYRILFDKDGNPRL--SSFGLMKNSRDGKSYSTNLAFTPPEY 155
L + C + +L+ +I+ D P L S GL+ D K + ++ A+ PE
Sbjct: 793 LRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLRLSLPGLL--CTDTKCFISS-AYVAPET 849
Query: 156 MRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHAL-----DLIRSKNFL-------LLMDS 203
T +T +S +Y FG +L++LL+GK P+ A ++ + + +D
Sbjct: 850 RETKDITEKSDIYGFGLILIELLTGKS--PADAEFGVHGSIVEWARYCYSDCHLDMWIDP 907
Query: 204 ALEGHFS--NDEGTELVRLASRCLQSEARERPNAKSLVISLMS 244
++ G S +E E++ LA C ++ RP A ++ +L S
Sbjct: 908 SIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLES 950
|
Length = 968 |
| >gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Score = 50.8 bits (121), Expect = 4e-07
Identities = 42/159 (26%), Positives = 76/159 (47%), Gaps = 11/159 (6%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EA+ + LR ++L L E + +V EFM +L L + + +K + +
Sbjct: 49 LQEAQIMKKLRHDKLVPLYAVVSE-EPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDM 107
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYS 145
A +A + Y + ++ DL A IL + +++ FGL + +R G +
Sbjct: 108 AAQIADGMAYIE-RMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFP 166
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
+ +T PE GR T +S V+SFG +L +L++ +P
Sbjct: 167 --IKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVP 203
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260 |
| >gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Score = 50.7 bits (122), Expect = 4e-07
Identities = 40/160 (25%), Positives = 61/160 (38%), Gaps = 19/160 (11%)
Query: 90 LRVALYLAQALEYC----SSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYS 145
R+ L AL C L+ DL I D + N +L FGL K S++
Sbjct: 108 WRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFA 167
Query: 146 TNLAFTP----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLM 201
TP PE + +S ++S G ++ +L + PP A +N L L
Sbjct: 168 KTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALS--PPFTA------RNQLQLA 219
Query: 202 DSALEGHFSNDEG---TELVRLASRCLQSEARERPNAKSL 238
EG F +EL + L + +RP+ + L
Sbjct: 220 SKIKEGKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEEL 259
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265 |
| >gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Score = 50.4 bits (120), Expect = 5e-07
Identities = 50/213 (23%), Positives = 93/213 (43%), Gaps = 15/213 (7%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EA+ + LR E+L L E + +V E+M +L L + ++ + +
Sbjct: 49 LQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM 107
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYS 145
A +A + Y + ++ DL A IL ++ +++ FGL + +R G +
Sbjct: 108 AAQIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 166
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSAL 205
+ +T PE GR T +S V+SFG +L +L + +P ++ + L ++
Sbjct: 167 --IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN----REVLDQVERGY 220
Query: 206 EGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
+ L L +C + E ERP + L
Sbjct: 221 RMPCPPECPESLHDLMCQCWRKEPEERPTFEYL 253
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262 |
| >gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Score = 50.3 bits (120), Expect = 6e-07
Identities = 40/159 (25%), Positives = 74/159 (46%), Gaps = 11/159 (6%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMR--L 90
+EEA+ + L +L L G C E LV EFM + L+ +L Q K++ L
Sbjct: 47 IEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEHGCLSDYL---RAQRGKFSQETLL 103
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN--- 147
+ L + + + Y S ++ DL A L ++ ++S FG+ + D + S+
Sbjct: 104 GMCLDVCEGMAYLESSN-VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTK 162
Query: 148 --LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
+ ++ PE + + +S V+SFG ++ ++ S P
Sbjct: 163 FPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTP 201
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256 |
| >gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 49.8 bits (119), Expect = 7e-07
Identities = 55/218 (25%), Positives = 99/218 (45%), Gaps = 21/218 (9%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL-FHWETQPMKWAMRLR 91
E A + L + L G C DE ++V E++ +L +L + + W +L
Sbjct: 47 FEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKNLINISW--KLE 104
Query: 92 VALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYST---- 146
VA LA AL + KG L H ++ A +L ++ + + + +K S G S +
Sbjct: 105 VAKQLAWALHFLEDKG--LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPKE 162
Query: 147 ----NLAFTPPEYMRTGR-VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLM 201
+ + PPE + + ++ + +SFGT L ++ SG P S ALD S+ L
Sbjct: 163 ILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLS-ALD---SQKKLQFY 218
Query: 202 DSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239
+ + + TEL L ++C+ E RP+ ++++
Sbjct: 219 EDRHQ--LPAPKWTELANLINQCMDYEPDFRPSFRAII 254
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258 |
| >gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Score = 49.9 bits (119), Expect = 9e-07
Identities = 49/176 (27%), Positives = 81/176 (46%), Gaps = 19/176 (10%)
Query: 18 KSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLL-VAEFMPNETLAKHL 76
K +L+ D+ T+ E + + R+ + CC++ +RL V EF+ L +
Sbjct: 30 KDVILQDDDVECTMT--EKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGGDL---M 84
Query: 77 FHWETQPMKWAMRLRVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFG 133
FH Q + R Y A+ AL + KG +Y DL +L D +G+ +L+ FG
Sbjct: 85 FH--IQKSRRFDEARARFYAAEITSALMFLHDKG-IIYRDLKLDNVLLDHEGHCKLADFG 141
Query: 134 LMKNS-RDGKSYSTNLAFTP----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
+ K +GK+ ST TP PE ++ P ++ G +L ++L G H P
Sbjct: 142 MCKEGIFNGKTTST-FCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCG-HAP 195
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320 |
| >gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 49.0 bits (117), Expect = 1e-06
Identities = 55/221 (24%), Positives = 92/221 (41%), Gaps = 35/221 (15%)
Query: 34 EEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL--FHWETQPMKWAMRLR 91
+E + L+ + +G E D + E +P +LAK L + +P+
Sbjct: 51 QEIALLSKLQHPNIVQYLGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPEPV------- 103
Query: 92 VALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNS---RDGKSYS 145
+ LY Q LEY + ++ D+ IL D +G +L+ FG+ K KS+
Sbjct: 104 IRLYTRQILLGLEYLHDRN-TVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKSFK 162
Query: 146 TNLAFTPPEY-MRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLI-------RSKNF 197
+ + PE + G + ++S G +L++ +GK PP L+ + RSK
Sbjct: 163 GSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGK--PPWSQLEGVAAVFKIGRSKEL 220
Query: 198 LLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
+ D H S DE + + CLQ + RP A L
Sbjct: 221 PPIPD-----HLS-DEAKDFILK---CLQRDPSLRPTAAEL 252
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258 |
| >gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Score = 49.2 bits (117), Expect = 1e-06
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 11/159 (6%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
LEEA+ + LR ++L L E + +V E+M +L L E + +K + +
Sbjct: 49 LEEAQIMKKLRHDKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDM 107
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYS 145
A +A + Y + ++ DL + IL +++ FGL + +R G +
Sbjct: 108 AAQVAAGMAYIE-RMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFP 166
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
+ +T PE GR T +S V+SFG +L +L++ +P
Sbjct: 167 --IKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVP 203
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260 |
| >gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Score = 48.8 bits (117), Expect = 2e-06
Identities = 40/147 (27%), Positives = 62/147 (42%), Gaps = 33/147 (22%)
Query: 62 LVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQ---ALEYCSSKGRALYHDLNAYR 118
LV E++P LA L + + A +Y+A+ ALEY S G ++ DL
Sbjct: 70 LVMEYLPGGDLASLLENVGSLDEDVA-----RIYIAEIVLALEYLHSNG-IIHRDLKPDN 123
Query: 119 ILFDKDGNPRLSSFGLMK-------NSRDGKSYSTNLAFTPPEYMRTGRVTPESVV---- 167
IL D +G+ +L+ FGL K + + P+Y+ PE ++
Sbjct: 124 ILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYI-----APEVILGQGH 178
Query: 168 ------YSFGTMLLDLLSGKHIPPSHA 188
+S G +L + L G IPP H
Sbjct: 179 SKTVDWWSLGCILYEFLVG--IPPFHG 203
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265 |
| >gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Score = 48.9 bits (116), Expect = 2e-06
Identities = 62/243 (25%), Positives = 103/243 (42%), Gaps = 40/243 (16%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL--------FHWETQP--- 83
EA+ + NL+ E + G C E D ++V E+M + L K L E
Sbjct: 57 EAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAE 116
Query: 84 MKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS 143
+ + L +A +A + Y +S+ ++ DL L ++ ++ FG+ SRD
Sbjct: 117 LTQSQMLHIAQQIAAGMVYLASQ-HFVHRDLATRNCLVGENLLVKIGDFGM---SRD--V 170
Query: 144 YSTN-----------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDL 191
YST+ + + PPE + + T ES V+S G +L ++ + GK P + L
Sbjct: 171 YSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQ--PWYQL-- 226
Query: 192 IRSKNFLLLMDSALEGHFSNDEGT---ELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248
S N ++ + +G T E+ L C Q E R N K + L +L K
Sbjct: 227 --SNNEVI--ECITQGRVLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282
Query: 249 AEV 251
+ V
Sbjct: 283 SPV 285
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288 |
| >gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 48.5 bits (116), Expect = 2e-06
Identities = 37/153 (24%), Positives = 73/153 (47%), Gaps = 8/153 (5%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L EA +G + L G ++ +++ E+M N +L K L + + + +
Sbjct: 53 LTEASIMGQFDHPNIIRLEGVVTKSRPVMIITEYMENGSLDKFLRENDGK-FTVGQLVGM 111
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS-YSTN---- 147
+A ++Y S ++ DL A IL + + ++S FGL + D ++ Y+T
Sbjct: 112 LRGIASGMKYLSEMN-YVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKI 170
Query: 148 -LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS 179
+ +T PE + + T S V+SFG ++ +++S
Sbjct: 171 PIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMS 203
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 48.6 bits (116), Expect = 2e-06
Identities = 47/213 (22%), Positives = 93/213 (43%), Gaps = 19/213 (8%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVAL 94
E +A+ LR + L +L C + ++ E M +L L E Q + A + +A
Sbjct: 52 EVQALKRLRHKHLISLFAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMAC 111
Query: 95 YLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTNLAF-- 150
+A+ + Y + +++ DL A IL +D +++ FGL + ++ S + +
Sbjct: 112 QVAEGMAYLEEQ-NSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKKIPYKW 170
Query: 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP-----PSHALDLIRSKNFLLLMDSAL 205
T PE G + +S V+SFG +L ++ + +P D I + + + +
Sbjct: 171 TAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQI-TAGYRMPCPAKC 229
Query: 206 EGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
E+ ++ C +E +RP+ K+L
Sbjct: 230 P--------QEIYKIMLECWAAEPEDRPSFKAL 254
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Score = 48.5 bits (115), Expect = 3e-06
Identities = 37/159 (23%), Positives = 74/159 (46%), Gaps = 10/159 (6%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
LEEA + L+ ++L L + + ++ E+M +L L E + +
Sbjct: 49 LEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDF 108
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYS 145
+ +A+ + Y K ++ DL A +L + +++ FGL + +R+G +
Sbjct: 109 SAQIAEGMAYIERKNY-IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFP 167
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
+ +T PE + G T +S V+SFG +L ++++ IP
Sbjct: 168 --IKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIP 204
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261 |
| >gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 48.1 bits (115), Expect = 3e-06
Identities = 42/159 (26%), Positives = 81/159 (50%), Gaps = 10/159 (6%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EA+ + LR ++L L C E + +V E+M +L L E + ++ + +
Sbjct: 49 LQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDM 108
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYS 145
A +A+ + Y S+ ++ DL A IL ++ +++ FGL + +R+G +
Sbjct: 109 AAQIAEGMAYLESR-NYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREGAKFP 167
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
+ +T PE GR T +S V+SFG +L ++++ +P
Sbjct: 168 --IKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVP 204
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261 |
| >gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Score = 47.4 bits (112), Expect = 5e-06
Identities = 47/185 (25%), Positives = 80/185 (43%), Gaps = 33/185 (17%)
Query: 98 QALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----P 153
QALE+ S + ++ D+ + IL DG+ +L+ FG +S + + TP P
Sbjct: 127 QALEFLHSN-QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAP 185
Query: 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDE 213
E + P+ ++S G M ++++ G+ PP + +R+ L L+ + N E
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGE--PPYLNENPLRA---LYLIATNGTPELQNPE 240
Query: 214 GTELV--RLASRCLQSEARERPNAKSLVISLMSLQKEAEVPSYVLLGIQHETAPSTKPL- 270
+ +RCL + +R +AK L +QH+ KPL
Sbjct: 241 KLSAIFRDFLNRCLDMDVEKRGSAKEL--------------------LQHQFLKIAKPLS 280
Query: 271 SLTPL 275
SLTPL
Sbjct: 281 SLTPL 285
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296 |
| >gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Score = 47.4 bits (113), Expect = 5e-06
Identities = 47/224 (20%), Positives = 88/224 (39%), Gaps = 25/224 (11%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE---TQPMKWAMR 89
L EA + + + LIG +E R ++ E M L L +P M+
Sbjct: 57 LMEALIMSKFNHQNIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMK 116
Query: 90 --LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPR---LSSFGLMKNSRDGKSY 144
L A +A+ +Y ++ D+ A L G R ++ FG+ ++ Y
Sbjct: 117 DLLFCARDVAKGCKYLEEN-HFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYY 175
Query: 145 STN------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP-PSHALDLIRSKNF 197
+ + PPE G T ++ V+SFG +L ++ S ++P P ++
Sbjct: 176 RKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGR-----TNQEV 230
Query: 198 LLLMDSALEGHFSNDEG--TELVRLASRCLQSEARERPNAKSLV 239
+ + G +G + R+ + C Q +RPN +++
Sbjct: 231 MEFVTGG--GRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATIL 272
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277 |
| >gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Score = 47.0 bits (112), Expect = 7e-06
Identities = 39/154 (25%), Positives = 62/154 (40%), Gaps = 18/154 (11%)
Query: 98 QALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFG----LMKNSRDGKSYSTNLAFTP- 152
+ LEY S G+ ++ D+ A IL +DG+ +++ FG L + TP
Sbjct: 113 KGLEYLHSNGQ-IHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPC 171
Query: 153 ---PEYMRTGRVTPESV-VYSFGTMLLDLLSGK----HIPPSHALDLIRSKNFLLLMDSA 204
PE M ++SFG ++L +G PP L L + L A
Sbjct: 172 WMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGA 231
Query: 205 LEGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
+S ++ S CLQ + +RP A+ L
Sbjct: 232 DYKKYSK----SFRKMISLCLQKDPSKRPTAEEL 261
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267 |
| >gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Score = 47.3 bits (112), Expect = 7e-06
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 16/146 (10%)
Query: 53 CCYEADERLL-VAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQ---ALEYCSSKGR 108
C ++ E L V E++ L +FH ++ K+ + R Y A+ L++ SKG
Sbjct: 63 CTFQTKENLFFVMEYLNGGDL---MFHIQS-CHKFDLP-RATFYAAEIICGLQFLHSKG- 116
Query: 109 ALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPE 164
+Y DL IL D DG+ +++ FG+ K + G + + TP PE + +
Sbjct: 117 IVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQKYNTS 176
Query: 165 SVVYSFGTMLLDLLSGKHIPPSHALD 190
+SFG +L ++L G+ P H D
Sbjct: 177 VDWWSFGVLLYEMLIGQ--SPFHGHD 200
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316 |
| >gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Score = 47.2 bits (112), Expect = 7e-06
Identities = 54/239 (22%), Positives = 96/239 (40%), Gaps = 50/239 (20%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMP----NETLAKHLFHWETQP----- 83
L+E K + L+ + L+G C + D ++ E+M N+ L+ H + +
Sbjct: 67 LKEVKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAV 126
Query: 84 --------MKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLM 135
+ ++ L VAL +A ++Y SS ++ DL L ++ +++ FG+
Sbjct: 127 PPAHCLPAISYSSLLHVALQIASGMKYLSSLN-FVHRDLATRNCLVGENLTIKIADFGMS 185
Query: 136 KNSRDGKSYSTN-LAFTPPEYMR-----TGRVTPESVVYSFGTMLLDLLSGKHIPPSHAL 189
+N G Y A P +M G+ T S V++FG L ++L
Sbjct: 186 RNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILM---------- 235
Query: 190 DLIRSKNFLLLMDSAL---EGHFSNDEGTE------------LVRLASRCLQSEARERP 233
L + + + L D + G F D+G + L L +C + RERP
Sbjct: 236 -LCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERP 293
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304 |
| >gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Score = 46.8 bits (111), Expect = 7e-06
Identities = 49/214 (22%), Positives = 95/214 (44%), Gaps = 16/214 (7%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EA + ++ L L+G C ++ EFM L +L Q + + L +
Sbjct: 50 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 109
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN----- 147
A ++ A+EY K ++ DL A L ++ +++ FGL + G +Y+ +
Sbjct: 110 ATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKF 167
Query: 148 -LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALE 206
+ +T PE + + + +S V++FG +L ++ + + P +DL + LL +E
Sbjct: 168 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYE-LLEKGYRME 225
Query: 207 GHFSNDEG--TELVRLASRCLQSEARERPNAKSL 238
EG ++ L C Q +RP+ +
Sbjct: 226 R----PEGCPPKVYELMRACWQWNPSDRPSFAEI 255
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 46.9 bits (112), Expect = 7e-06
Identities = 50/205 (24%), Positives = 84/205 (40%), Gaps = 18/205 (8%)
Query: 41 NLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQ-- 98
NL+ + IG +D ++ E+ N +L + + + P VA+Y+ Q
Sbjct: 55 NLKHPNIVKYIGSIETSDSLYIILEYAENGSLRQIIKKFGPFP-----ESLVAVYVYQVL 109
Query: 99 -ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----P 153
L Y +G ++ D+ A IL KDG +L+ FG+ D ++ TP P
Sbjct: 110 QGLAYLHEQG-VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASVVGTPYWMAP 168
Query: 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDE 213
E + + S ++S G +++LL+G PP + L+ L +
Sbjct: 169 EVIEMSGASTASDIWSLGCTVIELLTGN--PPYYDLN---PMAALFRIVQDDHPPLPEGI 223
Query: 214 GTELVRLASRCLQSEARERPNAKSL 238
EL +C Q + RP AK L
Sbjct: 224 SPELKDFLMQCFQKDPNLRPTAKQL 248
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Score = 46.9 bits (111), Expect = 8e-06
Identities = 38/145 (26%), Positives = 64/145 (44%), Gaps = 12/145 (8%)
Query: 57 ADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNA 116
DE +V EF+ L + H + A V L + +AL ++G ++ D+ +
Sbjct: 89 GDELWVVMEFLEGGALTDIVTHTRMNEEQIAA---VCLAVLKALSVLHAQG-VIHRDIKS 144
Query: 117 YRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPESVVYSFGT 172
IL DG +LS FG +L TP PE + PE ++S G
Sbjct: 145 DSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGI 204
Query: 173 MLLDLLSGK----HIPPSHALDLIR 193
M+++++ G+ + PP A+ +IR
Sbjct: 205 MVIEMVDGEPPYFNEPPLKAMKMIR 229
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292 |
| >gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Score = 46.8 bits (111), Expect = 9e-06
Identities = 39/159 (24%), Positives = 74/159 (46%), Gaps = 11/159 (6%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L EA + L+ RL L + + ++ E+M N +L L E + + +
Sbjct: 49 LAEANLMKQLQHPRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDM 107
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYS 145
A +A+ + + K ++ DL A IL + +++ FGL + +R+G +
Sbjct: 108 AAQIAEGMAFIERKN-YIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGAKFP 166
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
+ +T PE + G T +S V+SFG +L ++++ IP
Sbjct: 167 --IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIP 203
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260 |
| >gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Score = 46.2 bits (109), Expect = 1e-05
Identities = 55/227 (24%), Positives = 94/227 (41%), Gaps = 31/227 (13%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADER------LLVAEFMPNETLAKHLFHWE--TQPM 84
L EA + + LIG C + E +++ FM + L L + P
Sbjct: 48 LSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQ 107
Query: 85 KWAMRLRVALY--LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK 142
++ V +A +EY SSK ++ DL A + +++ N ++ FGL K +G
Sbjct: 108 YLPTQMLVKFMTDIASGMEYLSSK-SFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGD 166
Query: 143 SYSTN-LAFTPPEYMR----TGRV-TPESVVYSFGTMLLDLLSGKHIP-----PSHALDL 191
Y +A P +++ RV T +S V+SFG + ++ + P S D
Sbjct: 167 YYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDY 226
Query: 192 IRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
+R N L L+G +S L S C ++RP+ ++L
Sbjct: 227 LRQGNRLKQPPDCLDGLYS---------LMSSCWLLNPKDRPSFETL 264
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272 |
| >gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Score = 46.3 bits (110), Expect = 1e-05
Identities = 41/171 (23%), Positives = 75/171 (43%), Gaps = 31/171 (18%)
Query: 34 EEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF-------------HWE 80
+EA+ + +L+ + L+G C + ++ E++ + L + L
Sbjct: 57 QEAELMSDLQHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDET 116
Query: 81 TQPMKWAMR-LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSR 139
+ L +A+ +A +EY SS ++ DL A L + ++S FGL SR
Sbjct: 117 VKSSLDCSDFLHIAIQIAAGMEYLSSH-HFVHRDLAARNCLVGEGLTVKISDFGL---SR 172
Query: 140 DGKSYSTN-----------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS 179
D YS + + + PPE + G+ T ES ++SFG +L ++ S
Sbjct: 173 DI--YSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFS 221
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283 |
| >gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Score = 46.0 bits (109), Expect = 1e-05
Identities = 39/160 (24%), Positives = 66/160 (41%), Gaps = 10/160 (6%)
Query: 28 GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWA 87
GE + L E K + + S + +L D+ LV M L H+++ A
Sbjct: 36 GEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEA 95
Query: 88 MRLRVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL---MKNSRDG 141
R Y AQ LE+ + R +Y DL +L D GN R+S GL +K +
Sbjct: 96 ---RAIFYAAQIICGLEHLHQR-RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKI 151
Query: 142 KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGK 181
K + + PE ++ ++ G L ++++G+
Sbjct: 152 KGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGR 191
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277 |
| >gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 46.1 bits (109), Expect = 2e-05
Identities = 38/155 (24%), Positives = 72/155 (46%), Gaps = 11/155 (7%)
Query: 34 EEAKAVGNLRSERLANLIGCCYEADER--LLVAEFMPNETLAKHLFHWETQPMKWAMRLR 91
+E + + NL E + G C E L+ EF+P+ +L ++L + +L+
Sbjct: 55 KEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPR-NKNKINLKQQLK 113
Query: 92 VALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYST----- 146
A+ + + ++Y S+ + ++ DL A +L + + ++ FGL K K Y T
Sbjct: 114 YAVQICKGMDYLGSR-QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDL 172
Query: 147 --NLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS 179
+ + PE + + S V+SFG L +LL+
Sbjct: 173 DSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLT 207
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284 |
| >gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Score = 45.9 bits (109), Expect = 2e-05
Identities = 42/169 (24%), Positives = 75/169 (44%), Gaps = 27/169 (15%)
Query: 33 LEEAKAVGNLRSER--LANLIGC--------CYEADERL-LVAEFMPNETLAKHLFHWET 81
+++AK + R+ER L + C ++ D +L L+ +++ L HL+ E
Sbjct: 42 VQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQREH 101
Query: 82 QPMKWAMRLRVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-- 136
V +Y+A+ AL++ G +Y D+ IL D +G+ L+ FGL K
Sbjct: 102 FTES-----EVRVYIAEIVLALDHLHQLG-IIYRDIKLENILLDSEGHVVLTDFGLSKEF 155
Query: 137 ---NSRDGKSYSTNLAFTPPEYMRTGRVTPESVV--YSFGTMLLDLLSG 180
S+ + + PE +R G + V +S G + +LL+G
Sbjct: 156 LAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTG 204
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288 |
| >gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Score = 45.8 bits (108), Expect = 2e-05
Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 14/148 (9%)
Query: 98 QALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----P 153
+ L+Y S+ R ++ D+ A +L + G+ +L+ FG+ D + TP P
Sbjct: 112 KGLDYLHSE-RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAP 170
Query: 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS--ALEGHFSN 211
E ++ ++ ++S G ++L G+ PP+ L +R FL+ +S LEG +S
Sbjct: 171 EVIKQSAYDFKADIWSLGITAIELAKGE--PPNSDLHPMRVL-FLIPKNSPPTLEGQYSK 227
Query: 212 DEGTELVRLASRCLQSEARERPNAKSLV 239
CL + R RP AK L+
Sbjct: 228 ----PFKEFVEACLNKDPRFRPTAKELL 251
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277 |
| >gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Score = 46.2 bits (109), Expect = 2e-05
Identities = 61/252 (24%), Positives = 108/252 (42%), Gaps = 39/252 (15%)
Query: 17 LKSSVLESSDLGETLN-LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75
LKS E DL + ++ +E K +G + + + NL+G C + ++ E+ L ++
Sbjct: 58 LKSDATEK-DLSDLISEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREY 114
Query: 76 L--------------FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILF 121
L + + + + A +A+ +EY +SK + ++ DL A +L
Sbjct: 115 LRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK-KCIHRDLAARNVLV 173
Query: 122 DKDGNPRLSSFGLMKNSRDGKSY--STN----LAFTPPEYMRTGRVTPESVVYSFGTMLL 175
+D +++ FGL ++ Y +TN + + PE + T +S V+SFG +L
Sbjct: 174 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLW 233
Query: 176 DL--LSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGT---ELVRLASRCLQSEAR 230
++ L G P +L F LL EGH + EL + C +
Sbjct: 234 EIFTLGGSPYPGVPVEEL-----FKLLK----EGHRMDKPSNCTNELYMMMRDCWHAVPS 284
Query: 231 ERPNAKSLVISL 242
+RP K LV L
Sbjct: 285 QRPTFKQLVEDL 296
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307 |
| >gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Score = 46.1 bits (109), Expect = 2e-05
Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 18/147 (12%)
Query: 53 CCYEADERLL-VAEFMPNETLAKHLFHWETQPMKWAMRL-RVALYLAQ---ALEYCSSKG 107
C ++ E L V EF+ L +FH + K L R Y A+ L++ SKG
Sbjct: 63 CTFQTKEHLFFVMEFLNGGDL---MFHIQD---KGRFDLYRATFYAAEIVCGLQFLHSKG 116
Query: 108 RALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTP 163
+Y DL ++ D+DG+ +++ FG+ K + G + ++ TP PE ++ + T
Sbjct: 117 -IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCGTPDYIAPEILQGLKYTF 175
Query: 164 ESVVYSFGTMLLDLLSGKHIPPSHALD 190
+SFG +L ++L G+ P H D
Sbjct: 176 SVDWWSFGVLLYEMLIGQ--SPFHGDD 200
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 45.6 bits (109), Expect = 2e-05
Identities = 54/245 (22%), Positives = 92/245 (37%), Gaps = 48/245 (19%)
Query: 20 SVLESSDLGETLN--LEEAKAVGNLRSERLANLIGCCYEADER--LLVAEFMPNETLAKH 75
SV S D E L E + + +L+ + G + ++ + E++ +L+
Sbjct: 32 SVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSL 91
Query: 76 L-----FHWETQPMKWAMRLRVALYLAQ---ALEYCSSKGRALYH-DLNAYRILFDKDGN 126
L E + Y Q L Y S G H D+ IL D DG
Sbjct: 92 LKKFGKLP-EPV---------IRKYTRQILEGLAYLHSNGIV--HRDIKGANILVDSDGV 139
Query: 127 PRLSSFGLMK--NSRDGKSYSTNLAFTP----PEYMRTGRVTPESVVYSFGTMLLDLLSG 180
+L+ FG K + + ++ TP PE +R + ++S G ++++ +G
Sbjct: 140 VKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATG 199
Query: 181 KHIPPSHALDLIRSKNFLLLMDSALEG-------HFSNDEGTELVRLASRCLQSEARERP 233
K PP L L G H S +E + +R +CL+ + ++RP
Sbjct: 200 K--PPWSELG----NPMAALYKIGSSGEPPEIPEHLS-EEAKDFLR---KCLRRDPKKRP 249
Query: 234 NAKSL 238
A L
Sbjct: 250 TADEL 254
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Score = 45.5 bits (108), Expect = 2e-05
Identities = 39/154 (25%), Positives = 63/154 (40%), Gaps = 9/154 (5%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EA + +L E L L G ++V E P +L L +
Sbjct: 44 LKEAAIMHSLDHENLIRLYGVVL-THPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDY 102
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN----- 147
A+ +A + Y SK R ++ DL A IL D ++ FGLM+ + +
Sbjct: 103 AVQIANGMRYLESK-RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLK 161
Query: 148 --LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS 179
A+ PE +RT + S V+ FG L ++ +
Sbjct: 162 VPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFT 195
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257 |
| >gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Score = 45.3 bits (108), Expect = 2e-05
Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 17/206 (8%)
Query: 41 NLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQAL 100
+ + + + DE +V E+M +L + M V + Q L
Sbjct: 71 DCKHPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNFV-RMNEPQIAYVCREVLQGL 129
Query: 101 EYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYM 156
EY S+ ++ D+ + IL KDG+ +L+ FG KS ++ TP PE +
Sbjct: 130 EYLHSQNV-IHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVI 188
Query: 157 RTGRVTPESVVYSFGTMLLDLLSGK--HI--PPSHALDLIRSKNFLLLMDSALEGHFSND 212
+ P+ ++S G M +++ G+ ++ PP AL LI +K L + +S
Sbjct: 189 KRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNPEK---WSP- 244
Query: 213 EGTELVRLASRCLQSEARERPNAKSL 238
E ++CL + +RP+A+ L
Sbjct: 245 ---EFKDFLNKCLVKDPEKRPSAEEL 267
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286 |
| >gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Score = 44.9 bits (107), Expect = 3e-05
Identities = 48/209 (22%), Positives = 85/209 (40%), Gaps = 43/209 (20%)
Query: 54 CYEA---DERL-LVAEFMPNETLA---KHLFHWETQPMKWAMRLRVALYLAQALEYCSSK 106
CY A + + +V E+M +LA K + + +A + + L+Y +K
Sbjct: 64 CYGAFYKEGEISIVLEYMDGGSLADLLKKVGKIPEPVLA-----YIARQILKGLDYLHTK 118
Query: 107 GRALYHDLNAYRILFDKDGNPRLSSFG---LMKNSRDGK-SYSTNLAFTPPEYMRTGRVT 162
++ D+ +L + G +++ FG +++N+ D ++ + + PE R+
Sbjct: 119 RHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNTFVGTVTYMSPE-----RIQ 173
Query: 163 PESVVY-----SFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD--------SALEGHF 209
ES Y S G LL+ GK P +F LM S F
Sbjct: 174 GESYSYAADIWSLGLTLLECALGKF-PFLPP----GQPSFFELMQAICDGPPPSLPAEEF 228
Query: 210 SNDEGTELVRLASRCLQSEARERPNAKSL 238
S E + + S CLQ + ++RP+A L
Sbjct: 229 S-PEFRDFI---SACLQKDPKKRPSAAEL 253
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264 |
| >gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Score = 45.1 bits (106), Expect = 4e-05
Identities = 47/185 (25%), Positives = 79/185 (42%), Gaps = 33/185 (17%)
Query: 98 QALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----P 153
QAL++ S + ++ D+ + IL DG+ +L+ FG +S + + TP P
Sbjct: 126 QALDFLHSN-QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAP 184
Query: 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDE 213
E + P+ ++S G M ++++ G+ PP + +R+ L L+ + N E
Sbjct: 185 EVVTRKAYGPKVDIWSLGIMAIEMVEGE--PPYLNENPLRA---LYLIATNGTPELQNPE 239
Query: 214 GTELV--RLASRCLQSEARERPNAKSLVISLMSLQKEAEVPSYVLLGIQHETAPSTKPL- 270
V +RCL+ + R +AK L +QH KPL
Sbjct: 240 RLSAVFRDFLNRCLEMDVDRRGSAKEL--------------------LQHPFLKLAKPLS 279
Query: 271 SLTPL 275
SLTPL
Sbjct: 280 SLTPL 284
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297 |
| >gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 44.8 bits (106), Expect = 4e-05
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 9/100 (9%)
Query: 92 VALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYS- 145
V YLA+ AL++ S G +Y DL IL D++G+ +L+ FGL K S D K+YS
Sbjct: 100 VKFYLAELALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF 158
Query: 146 -TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
+ + PE + T + +SFG ++ ++L+G +P
Sbjct: 159 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG-SLP 197
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318 |
| >gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 44.6 bits (105), Expect = 4e-05
Identities = 50/232 (21%), Positives = 94/232 (40%), Gaps = 43/232 (18%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQP--------- 83
L+E K + L++ + L+G C D ++ E+M N L + L E +
Sbjct: 65 LKEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIP 124
Query: 84 -MKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK 142
+ A L +A+ +A ++Y +S ++ DL L +++ FG+ +N G
Sbjct: 125 SVSIANLLYMAVQIASGMKYLASLN-FVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGD 183
Query: 143 SYSTN-LAFTPPEYMR-----TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKN 196
Y A P +M G+ T S V++FG L ++ + L + +
Sbjct: 184 YYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFT-----------LCKEQP 232
Query: 197 FLLLMDSAL---EGHFSNDEGTE------------LVRLASRCLQSEARERP 233
+ LL D + G F ++G + + +L RC + ++RP
Sbjct: 233 YSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRP 284
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295 |
| >gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Score = 44.6 bits (105), Expect = 5e-05
Identities = 57/247 (23%), Positives = 102/247 (41%), Gaps = 45/247 (18%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL--------FHWETQPMK- 85
EA+ + NL+ E + G C + D ++V E+M + L K L + QP +
Sbjct: 57 EAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQA 116
Query: 86 -----WAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD 140
+ L +A +A + Y +S+ ++ DL L + ++ FG+ SRD
Sbjct: 117 KGELGLSQMLHIASQIASGMVYLASQ-HFVHRDLATRNCLVGANLLVKIGDFGM---SRD 172
Query: 141 GKSYSTN-----------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GK----HIP 184
YST+ + + PPE + + T ES V+SFG +L ++ + GK +
Sbjct: 173 --VYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLS 230
Query: 185 PSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMS 244
+ ++ I L + E+ + C Q E ++R N K + L +
Sbjct: 231 NTEVIECITQGRVLERPRVCPK---------EVYDIMLGCWQREPQQRLNIKEIYKILHA 281
Query: 245 LQKEAEV 251
L K +
Sbjct: 282 LGKATPI 288
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291 |
| >gnl|CDD|238112 cd00189, TPR, Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]- X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans in various subcellular locations; involved in a variety of functions including protein-protein interactions, but common features in the interaction partners have not been defined; involved in chaperone, cell-cycle, transciption, and protein transport complexes; the number of TPR motifs varies among proteins (1,3-11,13 15,16,19); 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accomodate an alpha-helix of a target protein; it has been proposed that TPR proteins preferably interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes; examples of TPR-proteins include, Cdc16p, Cdc23p and Cdc27p components of the cyclosome/APC, the Pex5p/Pas10p receptor for peroxisomal targeting signals, the Tom70p co-receptor for mitochondrial targeting signals, Ser/Thr phosphatase 5C and the p110 subunit of O-GlcNAc transferase; three copies of the repeat are present here | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 6e-05
Identities = 21/101 (20%), Positives = 39/101 (38%), Gaps = 7/101 (6%)
Query: 322 KKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPT---VYARRCLSYLMNDMPQEALGDAMQ 378
G+ ++ D+ A++ Y + ++ + P Y +Y +EAL D +
Sbjct: 4 LNLGNLYYKLGDYDEALEYYEKALE----LDPDNADAYYNLAAAYYKLGKYEEALEDYEK 59
Query: 379 AQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAK 419
A + PD A Y + LG +A E + L+
Sbjct: 60 ALELDPDNAKAYYNLGLAYYKLGKYEEALEAYEKALELDPN 100
|
Length = 100 |
| >gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Score = 44.1 bits (104), Expect = 7e-05
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 10/99 (10%)
Query: 91 RVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN 147
R Y AQ LE+ + R +Y DL +L D DGN R+S GL +DG+S +
Sbjct: 98 RACFYTAQIISGLEHLHQR-RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKG 156
Query: 148 LAFTP----PEYMRTGRVTPESVVY-SFGTMLLDLLSGK 181
A TP PE ++ G SV Y + G L ++++ +
Sbjct: 157 YAGTPGFMAPELLQ-GEEYDFSVDYFALGVTLYEMIAAR 194
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280 |
| >gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Score = 44.2 bits (104), Expect = 7e-05
Identities = 39/160 (24%), Positives = 68/160 (42%), Gaps = 10/160 (6%)
Query: 28 GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWA 87
GE++ L E + + + S + +L D LV M L H++H +
Sbjct: 43 GESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEG 102
Query: 88 MRLRVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--- 141
R Y A+ LE + R +Y DL IL D G+ R+S GL + +G
Sbjct: 103 ---RAVFYAAEICCGLEDLHQE-RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTI 158
Query: 142 KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGK 181
K + + PE ++ R T ++ G +L ++++G+
Sbjct: 159 KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 198
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285 |
| >gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Score = 43.9 bits (103), Expect = 8e-05
Identities = 46/210 (21%), Positives = 91/210 (43%), Gaps = 19/210 (9%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L EA + L+ ++L L + ++ EFM +L L E +
Sbjct: 49 LAEANVMKTLQHDKLVKL-HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDF 107
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYS 145
+ +A+ + + + ++ DL A IL +++ FGL + +R+G +
Sbjct: 108 SAQIAEGMAFIEQRNY-IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFP 166
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP-PSHA-LDLIRSKNFLLLMDS 203
+ +T PE + G T +S V+SFG +L+++++ IP P + ++IR+ ++
Sbjct: 167 --IKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRA------LER 218
Query: 204 ALEGHFSNDEGTELVRLASRCLQSEARERP 233
+ EL + RC ++ ERP
Sbjct: 219 GYRMPRPENCPEELYNIMMRCWKNRPEERP 248
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260 |
| >gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 8e-05
Identities = 59/236 (25%), Positives = 109/236 (46%), Gaps = 17/236 (7%)
Query: 14 HCHLKSSVLESSDLGETLN-LEEAKAVGNLRSERLANLIGCCYEAD-ERLLVAEFMPNET 71
HC +KS + +DL E L+E + + + +L+G C ++ L+V +M +
Sbjct: 25 HCAVKS-LNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKHGD 83
Query: 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSS 131
L ++ ET + L +A+ +EY +SK + ++ DL A + D+ +++
Sbjct: 84 L-RNFIRSETHNPTVKDLIGFGLQVAKGMEYLASK-KFVHRDLAARNCMLDESFTVKVAD 141
Query: 132 FGLMKNSRDGKSYSTN---LAFTPPEYM-----RTGRVTPESVVYSFGTMLLDLLSGKHI 183
FGL ++ D + YS + A P ++M +T + T +S V+SFG +L +L++ +
Sbjct: 142 FGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGA 200
Query: 184 PPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239
PP +D +LL L+ + D L + C + RP LV
Sbjct: 201 PPYPDVDSFDITVYLLQGRRLLQPEYCPD---PLYEVMLSCWHPKPEMRPTFSELV 253
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 43.6 bits (104), Expect = 9e-05
Identities = 40/161 (24%), Positives = 65/161 (40%), Gaps = 38/161 (23%)
Query: 96 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP--- 152
L AL+Y S+ + L+ D+ I +G +L FG+ K S+ +
Sbjct: 112 LCLALKYLHSR-KILHRDIKPQNIFLTSNGLVKLGDFGI------SKVLSSTVDLAKTVV 164
Query: 153 --PEYMRTGRVTPE----------SVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLL 200
P Y+ +PE S ++S G +L +L + KH P +N L L
Sbjct: 165 GTPYYL-----SPELCQNKPYNYKSDIWSLGCVLYELCTLKH--PFEG------ENLLEL 211
Query: 201 MDSALEGHF---SNDEGTELVRLASRCLQSEARERPNAKSL 238
L+G + + +EL L S LQ + ERP+ +
Sbjct: 212 ALKILKGQYPPIPSQYSSELRNLVSSLLQKDPEERPSIAQI 252
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 9e-05
Identities = 43/193 (22%), Positives = 73/193 (37%), Gaps = 25/193 (12%)
Query: 58 DERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAY 117
DE +V EF+ L + H + A V L + +AL + ++G ++ D+ +
Sbjct: 89 DELWVVMEFLEGGALTDIVTHTRMNEEQIAT---VCLAVLKALSFLHAQG-VIHRDIKSD 144
Query: 118 RILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPESVVYSFGTM 173
IL DG +LS FG +L TP PE + E ++S G M
Sbjct: 145 SILLTSDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIM 204
Query: 174 LLDLLSGK----HIPPSHALDLIRSKNFLLLMDSALEGHFSNDE---GTELVRLASRCLQ 226
+++++ G+ + PP A+ IR + L R L
Sbjct: 205 VIEMVDGEPPYFNEPPLQAMKRIRD----------NLPPKLKNLHKVSPRLRSFLDRMLV 254
Query: 227 SEARERPNAKSLV 239
+ +R A L+
Sbjct: 255 RDPAQRATAAELL 267
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285 |
| >gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Score = 43.5 bits (102), Expect = 9e-05
Identities = 37/150 (24%), Positives = 68/150 (45%), Gaps = 14/150 (9%)
Query: 96 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP--- 152
+ + L+Y S+ + ++ D+ A +L + G +L+ FG+ D + TP
Sbjct: 110 ILKGLDYLHSE-KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWM 168
Query: 153 -PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS--ALEGHF 209
PE ++ ++ ++S G ++L G+ PP L ++ FL+ ++ LEG++
Sbjct: 169 APEVIKQSAYDSKADIWSLGITAIELAKGE--PPHSELHPMKVL-FLIPKNNPPTLEGNY 225
Query: 210 SNDEGTELVRLASRCLQSEARERPNAKSLV 239
S L CL E RP AK L+
Sbjct: 226 SK----PLKEFVEACLNKEPSFRPTAKELL 251
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277 |
| >gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Score = 43.7 bits (103), Expect = 1e-04
Identities = 55/225 (24%), Positives = 93/225 (41%), Gaps = 36/225 (16%)
Query: 58 DERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAY 117
DE +V E++ +L + + A R L QALE+ S ++ D+ +
Sbjct: 89 DELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFLHSNQ-VIHRDIKSD 144
Query: 118 RILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPESVVYSFGTM 173
IL DG+ +L+ FG +S + + TP PE + P+ ++S G M
Sbjct: 145 NILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIM 204
Query: 174 LLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELV--RLASRCLQSEARE 231
++++ G+ PP + +R+ L L+ + N E + +RCL+ + +
Sbjct: 205 AIEMVEGE--PPYLNENPLRA---LYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEK 259
Query: 232 RPNAKSLVISLMSLQKEAEVPSYVLLGIQHETAPSTKPL-SLTPL 275
R +AK L +QH KPL SLTPL
Sbjct: 260 RGSAKEL--------------------LQHPFLKIAKPLSSLTPL 284
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293 |
| >gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Score = 43.2 bits (102), Expect = 1e-04
Identities = 43/147 (29%), Positives = 71/147 (48%), Gaps = 18/147 (12%)
Query: 53 CCYEADERLL-VAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQ---ALEYCSSKGR 108
C ++ E L V E++ L H+ Q R Y A+ L++ KG
Sbjct: 63 CTFQTKEHLFFVMEYLNGGDLMFHI-----QSSGRFDEARARFYAAEIICGLQFLHKKG- 116
Query: 109 ALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPE 164
+Y DL +L DKDG+ +++ FG+ K + +G+ ++ TP PE ++ G+ E
Sbjct: 117 IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCGTPDYIAPEILK-GQKYNE 175
Query: 165 SV-VYSFGTMLLDLLSGKHIPPSHALD 190
SV +SFG +L ++L G+ P H D
Sbjct: 176 SVDWWSFGVLLYEMLIGQ--SPFHGED 200
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316 |
| >gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Score = 43.1 bits (101), Expect = 1e-04
Identities = 49/216 (22%), Positives = 93/216 (43%), Gaps = 21/216 (9%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADERLLV--AEFMPNETLAKHLFHWETQPMKWAMRLRV 92
E + + NL+ ER+ GC + E+ L E+MP ++ L + + ++ +
Sbjct: 54 EIQLLKNLQHERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGA--LTESVTRKY 111
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKN------SRDG-KSYS 145
+ + + Y S ++ D+ IL D GN +L FG K S G +S +
Sbjct: 112 TRQILEGMSYLHSN-MIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVT 170
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRS--KNFLLLMDS 203
+ PE + ++ V+S G ++++L+ K PP + + + K +
Sbjct: 171 GTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEK--PPWAEYEAMAAIFKIATQPTNP 228
Query: 204 ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239
L H S + + + C+ EAR RP+A+ L+
Sbjct: 229 QLPSHIS-EHARDFL----GCIFVEARHRPSAEELL 259
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266 |
| >gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 43.1 bits (101), Expect = 1e-04
Identities = 56/260 (21%), Positives = 107/260 (41%), Gaps = 33/260 (12%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMR--- 89
+E K +G + + + NL+G C + ++ E+ L ++L M ++
Sbjct: 68 MEMMKMIG--KHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCK 125
Query: 90 -----------LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNS 138
+ A +A+ +EY +S+ + ++ DL A +L +D +++ FGL ++
Sbjct: 126 LPEEQLTFKDLVSCAYQVARGMEYLASQ-KCIHRDLAARNVLVTEDNVMKIADFGLARDV 184
Query: 139 RDGKSY--STN----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLI 192
+ Y +TN + + PE + T +S V+SFG +L ++ + + S +
Sbjct: 185 HNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFT---LGGSPYPGIP 241
Query: 193 RSKNFLLLMDSALEGHFSNDEGT---ELVRLASRCLQSEARERPNAKSLVISLMSLQKEA 249
+ F LL EGH + EL + C + +RP K LV L +
Sbjct: 242 VEELFKLLK----EGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVT 297
Query: 250 EVPSYVLLGIQHETAPSTKP 269
Y+ L + E P
Sbjct: 298 STDEYLDLSVPFEQYSPGCP 317
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334 |
| >gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 2e-04
Identities = 42/168 (25%), Positives = 72/168 (42%), Gaps = 19/168 (11%)
Query: 98 QALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----P 153
AL+Y G ++ D+ A IL GN +L FG+ S + TP P
Sbjct: 112 VALKYIHKVG-VIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRSTFVGTPYWMAP 170
Query: 154 EYMRTGRVTPESV-VYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSA---LEG-H 208
E + G+ ++S G + ++ +G PP +D R+ +L+ S LE
Sbjct: 171 EVITEGKYYDTKADIWSLGITIYEMATGN--PPYSDVDAFRA--MMLIPKSKPPRLEDNG 226
Query: 209 FSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEVPSYVL 256
+S L + CL E +ER +A+ L+ S ++ ++ P +L
Sbjct: 227 YS----KLLREFVAACLDEEPKERLSAEELLKSKW-IKAHSKTPVSIL 269
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277 |
| >gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Score = 42.9 bits (101), Expect = 2e-04
Identities = 46/220 (20%), Positives = 86/220 (39%), Gaps = 27/220 (12%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAM---- 88
L+EA + N + L+G C + + ++ E M L +L + +
Sbjct: 47 LKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLK 106
Query: 89 -RLRVALYLAQALEYCSSKGRALYHDLNAYRIL-----FDKDGNPRLSSFGLMKNSRDGK 142
L + L +A+ Y + ++ DL A L +D D ++ FGL ++
Sbjct: 107 ELLDICLDVAKGCVYL-EQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSD 165
Query: 143 SYST------NLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP-PSHALDLIRSK 195
Y + + PE + G+ T +S V+SFG ++ ++L+ P P+
Sbjct: 166 YYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALN------- 218
Query: 196 NFLLLMDSALEGHFSNDEGT--ELVRLASRCLQSEARERP 233
N +L G E ++ +L + C + ERP
Sbjct: 219 NQEVLQHVTAGGRLQKPENCPDKIYQLMTNCWAQDPSERP 258
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269 |
| >gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Score = 42.6 bits (100), Expect = 2e-04
Identities = 38/153 (24%), Positives = 71/153 (46%), Gaps = 9/153 (5%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L EA +G + L G + ++V E+M N L L E Q + A +L
Sbjct: 54 LAEALTLGQFDHSNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEGQLV--AGQLMG 111
Query: 93 ALY-LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN---- 147
L LA ++Y S G ++ L A+++L + D ++S F ++ + Y+T
Sbjct: 112 MLPGLASGMKYLSEMG-YVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYTTMSGKS 170
Query: 148 -LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS 179
+ + PE ++ + S V+SFG ++ +++S
Sbjct: 171 PVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMS 203
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Score = 42.7 bits (100), Expect = 2e-04
Identities = 38/145 (26%), Positives = 63/145 (43%), Gaps = 12/145 (8%)
Query: 57 ADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNA 116
DE +V EF+ L + H + A V L + +AL Y ++G ++ D+ +
Sbjct: 91 GDELWVVMEFLEGGALTDIVTHTRMNEEQIAT---VCLSVLRALSYLHNQG-VIHRDIKS 146
Query: 117 YRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPESVVYSFGT 172
IL DG +LS FG +L TP PE + E ++S G
Sbjct: 147 DSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGI 206
Query: 173 MLLDLLSGK----HIPPSHALDLIR 193
M+++++ G+ + PP A+ IR
Sbjct: 207 MVIEMIDGEPPYFNEPPLQAMRRIR 231
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292 |
| >gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 41.7 bits (98), Expect = 4e-04
Identities = 43/164 (26%), Positives = 71/164 (43%), Gaps = 29/164 (17%)
Query: 92 VALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL-MKNSRDGKSYSTNLAF 150
V + +AL + S + ++ DL A IL DG+ +L+ FG+ KN + T +
Sbjct: 108 VCRQMLEALNFLHSH-KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRDTFIG- 165
Query: 151 TP----PEYM--RTGRVTP---ESVVYSFGTMLLDLLSGKHIPPSHALDLIR-------S 194
TP PE + T + P ++ ++S G L++L + PP H L+ +R S
Sbjct: 166 TPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQME--PPHHELNPMRVLLKILKS 223
Query: 195 KNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
+ L S +S+ L CL + +RP A L
Sbjct: 224 EPPTLDQPS----KWSSSFNDFL----KSCLVKDPDDRPTAAEL 259
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280 |
| >gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Score = 41.8 bits (98), Expect = 4e-04
Identities = 56/239 (23%), Positives = 100/239 (41%), Gaps = 38/239 (15%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQP--------- 83
L+E K + L+ + L+ C +D ++ E+M N L + L E Q
Sbjct: 67 LKEIKIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVT 126
Query: 84 MKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS 143
+ ++ + +A +A ++Y SS ++ DL L K+ +++ FG+ +N G
Sbjct: 127 ISYSTLIFMATQIASGMKYLSSLN-FVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDY 185
Query: 144 YSTN-LAFTPPEYMR-----TGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKN 196
Y A P +M G+ T S V++FG L ++L+ K P S D +N
Sbjct: 186 YRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIEN 245
Query: 197 FLLLMDSALEGHFSNDEGTE------------LVRLASRCLQSEARERPNAKSLVISLM 243
G F D+G + L +L C + A+ERP+ + + +L+
Sbjct: 246 ---------TGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296 |
| >gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Score = 41.5 bits (97), Expect = 4e-04
Identities = 37/160 (23%), Positives = 65/160 (40%), Gaps = 10/160 (6%)
Query: 28 GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWA 87
GE++ L E + + + S+ + NL D LV M L H+++ +
Sbjct: 43 GESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFE-- 100
Query: 88 MRLRVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY 144
R Y A+ LE + +Y DL IL D G+ R+S GL +G+S
Sbjct: 101 -EERALFYAAEILCGLEDLHREN-TVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESI 158
Query: 145 S---TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGK 181
+ + PE + R T + G ++ +++ G+
Sbjct: 159 RGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQ 198
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285 |
| >gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Score = 41.6 bits (97), Expect = 5e-04
Identities = 30/119 (25%), Positives = 58/119 (48%), Gaps = 9/119 (7%)
Query: 82 QPMKWAMRL------RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLM 135
Q +K A R+ +V++ + + L Y K + ++ D+ IL + G +L FG+
Sbjct: 92 QVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVS 151
Query: 136 KNSRD--GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKH-IPPSHALDL 191
D S+ ++ PE ++ + +S ++S G L++L G++ IPP A +L
Sbjct: 152 GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKEL 210
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331 |
| >gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 41.4 bits (97), Expect = 5e-04
Identities = 50/239 (20%), Positives = 99/239 (41%), Gaps = 28/239 (11%)
Query: 18 KSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77
+++ E ++ E L +E + + L + ++G E L E+M +++ HL
Sbjct: 37 RNTSSEQEEVVEAL-RKEIRLMARLNHPHIIRMLGATCEDSHFNLFVEWMAGGSVS-HLL 94
Query: 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNP-RLSSFGLM- 135
+ K A+ + L + L Y + ++ D+ +L D G R++ FG
Sbjct: 95 S-KYGAFKEAVIINYTEQLLRGLSYLHEN-QIIHRDVKGANLLIDSTGQRLRIADFGAAA 152
Query: 136 ----KNSRDGK---SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHA 188
K + G+ +AF PE +R + V+S G +++++ + K PP +A
Sbjct: 153 RLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAK--PPWNA 210
Query: 189 LDLIRSKNFLLLMDSA-------LEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVI 240
S + L+ A + H S L + RCL+ + +RP ++ L+
Sbjct: 211 EKH--SNHLALIFKIASATTAPSIPEHLSPG----LRDVTLRCLELQPEDRPPSRELLK 263
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268 |
| >gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 41.3 bits (97), Expect = 6e-04
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 23/160 (14%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADER--LLVAEFMPNETLAKHLFHWETQPMKWAMRL-- 90
E + + +L+ + + G CY A R LV E++P +L +L K RL
Sbjct: 55 EIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYL-------QKHRERLDH 107
Query: 91 -RVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYST 146
++ LY +Q +EY SK R ++ DL IL + + ++ FGL K K Y
Sbjct: 108 RKLLLYASQICKGMEYLGSK-RYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYK 166
Query: 147 -------NLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS 179
+ + PE + + + S V+SFG +L +L +
Sbjct: 167 VREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 206
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284 |
| >gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 41.3 bits (97), Expect = 6e-04
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 22/97 (22%)
Query: 99 ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYMRT 158
ALEY SK +Y DL IL DK+G+ +L+ FG K RD ++++ L T PEY+
Sbjct: 113 ALEYLHSKE-IVYRDLKPENILLDKEGHIKLTDFGFAKKLRD-RTWT--LCGT-PEYL-- 165
Query: 159 GRVTPESVV----------YSFGTMLLDLLSGKHIPP 185
PE + ++ G ++ ++L G PP
Sbjct: 166 ---APEVIQSKGHNKAVDWWALGILIYEMLVG--YPP 197
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291 |
| >gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Score = 41.1 bits (96), Expect = 7e-04
Identities = 45/227 (19%), Positives = 95/227 (41%), Gaps = 32/227 (14%)
Query: 24 SSDLGETLNLEEAKAVGNLRSE-RLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQ 82
S D L +E AK G+LRS R + +G Y + + +L + + +
Sbjct: 73 SQDGPLLLIVEYAK-YGSLRSFLRESRKVGPSYLGSD---------GNRNSSYLDNPDER 122
Query: 83 PMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK 142
+ + A +++ ++Y + + ++ DL A +L + ++S FGL ++ +
Sbjct: 123 ALTMGDLISFAWQISRGMQYLAEM-KLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEED 181
Query: 143 SYSTN------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKH----IPPSHALDL 191
SY + + E + T +S V+SFG +L ++++ G + I P +L
Sbjct: 182 SYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNL 241
Query: 192 IRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
+++ + ++ E E+ L C + E +RP +
Sbjct: 242 LKTGYRMERPENCSE---------EMYNLMLTCWKQEPDKRPTFADI 279
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290 |
| >gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Score = 41.2 bits (96), Expect = 8e-04
Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 14/138 (10%)
Query: 53 CCYEADERL-LVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALY 111
C ++ D+ L +V E+MP L + +++ P KWA + LA L+ S G ++
Sbjct: 110 CAFQDDKYLYMVMEYMPGGDLVNLMSNYDV-PEKWAKFYTAEVVLA--LDAIHSMG-LIH 165
Query: 112 HDLNAYRILFDKDGNPRLSSFGL-MKNSRDGKSYSTNLAFTP----PEYMRT----GRVT 162
D+ +L DK G+ +L+ FG MK G TP PE +++ G
Sbjct: 166 RDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYG 225
Query: 163 PESVVYSFGTMLLDLLSG 180
E +S G L ++L G
Sbjct: 226 RECDWWSVGVFLFEMLVG 243
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370 |
| >gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Score = 40.8 bits (95), Expect = 9e-04
Identities = 33/136 (24%), Positives = 61/136 (44%), Gaps = 14/136 (10%)
Query: 54 CYEADERL-LVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQ---ALEYCSSKGRA 109
C++ RL LV E++ L H+ P + A Y A+ AL + +G
Sbjct: 64 CFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPEEHAR-----FYAAEICIALNFLHERG-I 117
Query: 110 LYHDLNAYRILFDKDGNPRLSSFGLMKNS-RDGKSYSTNLA---FTPPEYMRTGRVTPES 165
+Y DL +L D DG+ +L+ +G+ K G + ST + PE +R
Sbjct: 118 IYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSV 177
Query: 166 VVYSFGTMLLDLLSGK 181
++ G ++ ++++G+
Sbjct: 178 DWWALGVLMFEMMAGR 193
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327 |
| >gnl|CDD|222112 pfam13414, TPR_11, TPR repeat | Back alignment and domain information |
|---|
Score = 37.3 bits (87), Expect = 0.001
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 322 KKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYL-MNDMPQEALGDAMQAQ 380
K G+ F+ D+ AI+ Y + ++ + Y L+YL + +EAL D +A
Sbjct: 7 KNLGNALFKLGDYDEAIEAYEKALELDPD-NAEAYYNLALAYLKLGKDYEEALEDLEKAL 65
Query: 381 VVSP 384
+ P
Sbjct: 66 ELDP 69
|
Length = 69 |
| >gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 0.001
Identities = 52/232 (22%), Positives = 93/232 (40%), Gaps = 37/232 (15%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFM--------------PNETLAKHLFH 78
+E K +G + + + NL+G C + +V E+ P E +
Sbjct: 66 MEMMKMIG--KHKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPR 123
Query: 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNS 138
+ + + A +A+ +E+ +SK + ++ DL A +L +D +++ FGL ++
Sbjct: 124 PPEETLTQKDLVSFAYQVARGMEFLASK-KCIHRDLAARNVLVTEDHVMKIADFGLARDI 182
Query: 139 RDGKSY--STN----LAFTPPEYMRTGRVTPESVVYSFGTMLLDL--LSGKHIP--PSHA 188
Y +TN + + PE + T +S V+SFG +L ++ L G P P
Sbjct: 183 HHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE 242
Query: 189 L-DLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239
L L++ M+ E L L C +RP K LV
Sbjct: 243 LFKLLKEGY---RMEKP---QNCTQE---LYHLMRDCWHEVPSQRPTFKQLV 285
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293 |
| >gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 0.001
Identities = 45/194 (23%), Positives = 76/194 (39%), Gaps = 51/194 (26%)
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAF 150
++A+ + +ALEY SK ++ D+ +L +++G +L FG+ D + + +
Sbjct: 107 KIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVAKTIDAGC 166
Query: 151 TPPEYMRTGRVTPE---------SVVYSFGTMLLDLLSGKHIP----------------- 184
P YM R+ PE S V+S G +++L +G+ P
Sbjct: 167 KP--YMAPERINPELNQKGYDVKSDVWSLGITMIELATGRF-PYDSWKTPFQQLKQVVEE 223
Query: 185 PSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSL---VIS 241
PS L FS E ++CL+ +ERPN L
Sbjct: 224 PSPQLP---------------AEKFS----PEFQDFVNKCLKKNYKERPNYPELLQHPFF 264
Query: 242 LMSLQKEAEVPSYV 255
+ L K +V S+V
Sbjct: 265 ELHLSKNTDVASFV 278
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283 |
| >gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Score = 40.4 bits (94), Expect = 0.001
Identities = 39/166 (23%), Positives = 69/166 (41%), Gaps = 21/166 (12%)
Query: 90 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN-- 147
L +A+ +A +EY SS ++ DL A IL + + ++S GL + Y
Sbjct: 127 LHIAIQIAAGMEYLSSH-FFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPK 185
Query: 148 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP-----PSHALDLIRSKNFL 198
+ + PPE + G+ + +S ++SFG +L ++ S P ++++R + L
Sbjct: 186 SLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKRQLL 245
Query: 199 LLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMS 244
S D + L + C Q RP K + L S
Sbjct: 246 PC---------SEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283 |
| >gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Score = 40.3 bits (94), Expect = 0.001
Identities = 55/250 (22%), Positives = 100/250 (40%), Gaps = 24/250 (9%)
Query: 20 SVLESSDLGETLN-LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78
+V ES+ L E + L EA + + L+G + L+V E M + L +L
Sbjct: 43 TVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRS 102
Query: 79 W----ETQPMKWAMRLR----VALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLS 130
E P + L+ +A +A + Y ++K + ++ DL A + D ++
Sbjct: 103 LRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIG 161
Query: 131 SFGLMKN------SRDGKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
FG+ ++ R G + + PE ++ G T S ++SFG +L ++ S P
Sbjct: 162 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP 221
Query: 185 PSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMS 244
L + +MD N + L C Q + RP + +++
Sbjct: 222 YQ---GLSNEQVLKFVMDGGYLDQPDNCP-ERVTDLMRMCWQFNPKMRP----TFLEIVN 273
Query: 245 LQKEAEVPSY 254
L K+ PS+
Sbjct: 274 LLKDDLHPSF 283
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288 |
| >gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 0.001
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 7/102 (6%)
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP 152
A +A AL Y S +Y DL IL D G+ L+ FGL K + ++ TP
Sbjct: 102 AAEIASALGYLHSL-NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCGTP 160
Query: 153 ----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALD 190
PE +R + G +L ++L G +PP ++ D
Sbjct: 161 EYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYG--LPPFYSRD 200
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323 |
| >gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 0.001
Identities = 53/227 (23%), Positives = 80/227 (35%), Gaps = 36/227 (15%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EA + + LIG E + +V E P L +L +
Sbjct: 55 LQEAYIMRQFDHPHIVKLIGVITE-NPVWIVMELAPLGELRSYL----QVNKYSLDLASL 109
Query: 93 ALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLA 149
LY Q AL Y SK R ++ D+ A +L +L FGL + D Y +
Sbjct: 110 ILYSYQLSTALAYLESK-RFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYKASKG 168
Query: 150 FTP-----PEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDS 203
P PE + R T S V+ FG + ++L G K F + ++
Sbjct: 169 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGV-------------KPFQGVKNN 215
Query: 204 ALEGHFSNDE--------GTELVRLASRCLQSEARERPNAKSLVISL 242
+ G N E L L ++C + +RP L L
Sbjct: 216 DVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQL 262
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270 |
| >gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 40.2 bits (94), Expect = 0.001
Identities = 41/174 (23%), Positives = 72/174 (41%), Gaps = 28/174 (16%)
Query: 32 NLEEAKAVGNLRSER-----------LANLIGCCYEADERLLVAEFMPN---ETLAKHLF 77
++ V N+++ER +A L D LV E++ +L K L
Sbjct: 33 DMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNGGDCASLIKTL- 91
Query: 78 HWETQPMKWAMRLRVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL 134
P WA + Y+A+ +E +G ++ D+ +L D+ G+ +L+ FGL
Sbjct: 92 --GGLPEDWAKQ-----YIAEVVLGVEDLHQRG-IIHRDIKPENLLIDQTGHLKLTDFGL 143
Query: 135 MKNSRDGKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHA 188
+N + K + + PE + S +S G ++ + L G PP HA
Sbjct: 144 SRNGLENKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFG--YPPFHA 195
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260 |
| >gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Score = 40.4 bits (94), Expect = 0.001
Identities = 33/140 (23%), Positives = 63/140 (45%), Gaps = 9/140 (6%)
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD--GKSYSTNL 148
+V++ + + L Y K + ++ D+ IL + G +L FG+ D S+
Sbjct: 107 KVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 166
Query: 149 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKH-IPPSHALDLIRSKNFLLLMDSALEG 207
++ PE ++ + +S ++S G L+++ G++ IPP A K L+ +EG
Sbjct: 167 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDA------KELELMFGCPVEG 220
Query: 208 HFSNDEGTELVRLASRCLQS 227
+ E + R R L S
Sbjct: 221 DPAESETSPRPRPPGRPLSS 240
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333 |
| >gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 40.2 bits (94), Expect = 0.001
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 98 QALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLA------FT 151
+ L Y SKG L+ DL A +L D DG ++S FG+ K S D N++ +
Sbjct: 119 EGLAYLHSKG-ILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWM 177
Query: 152 PPEYMRTGRVTPESVV--YSFGTMLLDLLSGK 181
PE + + + V +S G ++L++ +G+
Sbjct: 178 APEVIHSYSQGYSAKVDIWSLGCVVLEMFAGR 209
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272 |
| >gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Score = 40.2 bits (94), Expect = 0.001
Identities = 40/141 (28%), Positives = 69/141 (48%), Gaps = 24/141 (17%)
Query: 54 CYEADERL-LVAEFMPNETLAKHLFHWETQ---PMKWAMRLRVALYLAQ---ALEYCSSK 106
C++ + RL V EF+ L +FH + Q P + A Y A+ AL + +
Sbjct: 64 CFQTESRLFFVIEFVSGGDL---MFHMQRQRKLPEEHAR-----FYSAEISLALNFLHER 115
Query: 107 GRALYHDLNAYRILFDKDGNPRLSSFGLMK-NSRDGKSYSTNLAFTP----PEYMRTGRV 161
G +Y DL +L D +G+ +L+ +G+ K R G + ST TP PE +R G
Sbjct: 116 G-IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTST-FCGTPNYIAPEILR-GED 172
Query: 162 TPESV-VYSFGTMLLDLLSGK 181
SV ++ G ++ ++++G+
Sbjct: 173 YGFSVDWWALGVLMFEMMAGR 193
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329 |
| >gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Score = 40.1 bits (93), Expect = 0.001
Identities = 37/169 (21%), Positives = 72/169 (42%), Gaps = 11/169 (6%)
Query: 18 KSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77
K ++ ++ TL E++ + N R L +L D V E++ L F
Sbjct: 30 KEVIIAKDEVAHTLT--ESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGEL---FF 84
Query: 78 HWETQPMKWAMRLRV-ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK 136
H + + R R + AL+Y S G+ +Y DL ++ DKDG+ +++ FGL K
Sbjct: 85 HLSRERVFSEDRTRFYGAEIVSALDYLHS-GKIVYRDLKLENLMLDKDGHIKITDFGLCK 143
Query: 137 ----NSRDGKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGK 181
++ K++ + PE + + G ++ +++ G+
Sbjct: 144 EGITDAATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 192
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328 |
| >gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 0.001
Identities = 41/132 (31%), Positives = 62/132 (46%), Gaps = 17/132 (12%)
Query: 62 LVAEFMPNE---TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYR 118
LV E+M ++ L L H+ +K M+ L + L YC K L+ D+
Sbjct: 93 LVFEYMDHDLMGLLESGLVHFSEDHIKSFMK-----QLLEGLNYCHKKN-FLHRDIKCSN 146
Query: 119 ILFDKDGNPRLSSFGLMK--NSRDGKSYSTN----LAFTPPEYMR-TGRVTPESVVYSFG 171
IL + G +L+ FGL + NS + + Y TN L + PPE + R P V+S G
Sbjct: 147 ILLNNKGQIKLADFGLARLYNSEESRPY-TNKVITLWYRPPELLLGEERYGPAIDVWSCG 205
Query: 172 TMLLDLLSGKHI 183
+L +L + K I
Sbjct: 206 CILGELFTKKPI 217
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302 |
| >gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 39.8 bits (93), Expect = 0.001
Identities = 25/95 (26%), Positives = 49/95 (51%), Gaps = 11/95 (11%)
Query: 98 QALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK----NSRDGK------SYSTN 147
+ L Y ++G ++ D+ IL D G ++S FG+ K NS K S +
Sbjct: 117 KGLNYLHNRG-IIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGS 175
Query: 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKH 182
+ + PE ++ T ++ ++S G +++++L+GKH
Sbjct: 176 VFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKH 210
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267 |
| >gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 39.8 bits (93), Expect = 0.001
Identities = 39/161 (24%), Positives = 66/161 (40%), Gaps = 12/161 (7%)
Query: 28 GETLNLEEAKAVGNLRSERLANLIGCCYEADERL-LVAEFMPNETLAKHLFHWETQPMKW 86
GE + L E + + + S + +L YE + L LV M L H+++
Sbjct: 43 GEAMALNEKQILEKVNSRFVVSL-AYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDE 101
Query: 87 AMRLRVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-- 141
R Y A+ LE + R +Y DL IL D G+ R+S GL +G
Sbjct: 102 E---RAVFYAAEITCGLEDLHRE-RIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGET 157
Query: 142 -KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGK 181
+ + + PE ++ R T + G ++ +++ GK
Sbjct: 158 IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGK 198
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285 |
| >gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Score = 40.0 bits (93), Expect = 0.002
Identities = 34/153 (22%), Positives = 72/153 (47%), Gaps = 9/153 (5%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
++EA + ++ L L+G C +L V + MP+ L ++ H + + L
Sbjct: 57 MDEALIMASMDHPHLVRLLGVCLSPTIQL-VTQLMPHGCLLDYV-HEHKDNIGSQLLLNW 114
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-NSRDGKSYSTNLAFT 151
+ +A+ + Y + R ++ DL A +L + +++ FGL + D K Y+ +
Sbjct: 115 CVQIAKGMMYLEER-RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKM 173
Query: 152 PPEYM-----RTGRVTPESVVYSFGTMLLDLLS 179
P ++M + T +S V+S+G + +L++
Sbjct: 174 PIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 206
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303 |
| >gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Score = 40.0 bits (93), Expect = 0.002
Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 15/134 (11%)
Query: 58 DERLL--VAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLN 115
D+R L V E+MP L + +++ P KWA + LA L+ S G ++ D+
Sbjct: 114 DDRYLYMVMEYMPGGDLVNLMSNYDV-PEKWARFYTAEVVLA--LDAIHSMG-FIHRDVK 169
Query: 116 AYRILFDKDGNPRLSSFGL-MKNSRDGKSYSTNLAFTP----PEYMRT----GRVTPESV 166
+L DK G+ +L+ FG MK +++G TP PE +++ G E
Sbjct: 170 PDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECD 229
Query: 167 VYSFGTMLLDLLSG 180
+S G L ++L G
Sbjct: 230 WWSVGVFLYEMLVG 243
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371 |
| >gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.002
Identities = 34/158 (21%), Positives = 66/158 (41%), Gaps = 17/158 (10%)
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD--GKSYSTNL 148
++A+ + + L Y K + ++ D+ IL + G +L FG+ + K++
Sbjct: 104 KIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTFVGTS 163
Query: 149 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALE-- 206
++ PE ++ + +S ++S G L++L +G+ P L+ +
Sbjct: 164 SYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDP---PDGIFELLQYIVNEP 220
Query: 207 ------GHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
G FS D + CL + RERP+ K L
Sbjct: 221 PPRLPSGKFSPD----FQDFVNLCLIKDPRERPSYKEL 254
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265 |
| >gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Score = 39.8 bits (93), Expect = 0.002
Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 16/144 (11%)
Query: 53 CCYEADERLL-VAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQ---ALEYCSSKGR 108
CC++ +RL V E++ L ++ Q + R Y A+ AL + G
Sbjct: 63 CCFQTKDRLFFVMEYVNGGDLM-----FQIQRSRKFDEPRSRFYAAEVTLALMFLHRHG- 116
Query: 109 ALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPE 164
+Y DL IL D +G+ +L+ FG+ K +T TP PE ++ P
Sbjct: 117 VIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCGTPDYIAPEILQELEYGPS 176
Query: 165 SVVYSFGTMLLDLLSGKHIPPSHA 188
++ G ++ ++++G+ PP A
Sbjct: 177 VDWWALGVLMYEMMAGQ--PPFEA 198
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321 |
| >gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Score = 39.7 bits (93), Expect = 0.002
Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 14/145 (9%)
Query: 53 CCYEADERL-LVAEFMPNETLAKHLFHWETQPMKWAMRLRV-ALYLAQALEYCSSKGRAL 110
C++ +RL V E++ L +FH + R R A + L++ +G +
Sbjct: 63 SCFQTKDRLFFVMEYVNGGDL---MFHIQRSGRFDEPRARFYAAEIVLGLQFLHERG-II 118
Query: 111 YHDLNAYRILFDKDGNPRLSSFGLMK-NSRDGKSYSTNLAFTP----PEYMRTGRVTPES 165
Y DL +L D +G+ +++ FG+ K G + ST TP PE + P
Sbjct: 119 YRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTST-FCGTPDYIAPEILSYQPYGPAV 177
Query: 166 VVYSFGTMLLDLLSGKHIPPSHALD 190
++ G +L ++L+G+ P D
Sbjct: 178 DWWALGVLLYEMLAGQ--SPFEGDD 200
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318 |
| >gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 39.8 bits (93), Expect = 0.002
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 22/104 (21%)
Query: 95 YLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFT 151
YL++ ALE+ +G +Y DL IL D G+ +L+ FGL K S + + T
Sbjct: 105 YLSEISLALEHLHQQG-IIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTHTFCGT 163
Query: 152 PPEYMRTGRVTPESVV----------YSFGTMLLDLLSGKHIPP 185
EYM PE ++ +S G ++ D+L+G PP
Sbjct: 164 -IEYM-----APEILMRSGHGKAVDWWSLGALMYDMLTGA--PP 199
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323 |
| >gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 39.3 bits (92), Expect = 0.002
Identities = 42/175 (24%), Positives = 73/175 (41%), Gaps = 11/175 (6%)
Query: 12 WFHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNET 71
+K+ E G+ L EA + L + LIG C + + +LV E P
Sbjct: 23 EVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVC-KGEPLMLVMELAPLGP 81
Query: 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSS 131
L K+L + + + + +A +A + Y SK ++ DL A +L ++S
Sbjct: 82 LLKYLK--KRREIPVSDLKELAHQVAMGMAYLESK-HFVHRDLAARNVLLVNRHQAKISD 138
Query: 132 FGLMKNSRDGKSYSTN-------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS 179
FG+ + G Y L + PE + G+ + +S V+S+G L + S
Sbjct: 139 FGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFS 193
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257 |
| >gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Score = 39.5 bits (93), Expect = 0.002
Identities = 36/159 (22%), Positives = 63/159 (39%), Gaps = 36/159 (22%)
Query: 53 CCYEADERL-LVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQ---ALEYCSSKGR 108
++ +E L V E+ PN L +++ + + K Y A+ ALEY SKG
Sbjct: 69 YTFQDEENLYFVLEYAPNGELLQYIRKYGSLDEKCTR-----FYAAEILLALEYLHSKG- 122
Query: 109 ALYH-DLNAYRILFDKDGNPRLSSFG--------LMKNSRDGKSYSTNLA---------- 149
+ H DL IL DKD + +++ FG S G + + +
Sbjct: 123 -IIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFAS 181
Query: 150 ------FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKH 182
+ PE + S +++ G ++ +L+GK
Sbjct: 182 FVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKP 220
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280 |
| >gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Score = 39.3 bits (91), Expect = 0.002
Identities = 30/133 (22%), Positives = 59/133 (44%), Gaps = 8/133 (6%)
Query: 54 CYEADERLL-VAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYH 112
C++ + RL V E++ L H+ P + A + LA L Y +G +Y
Sbjct: 64 CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA--LNYLHERG-IIYR 120
Query: 113 DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPESVVY 168
DL +L D +G+ +L+ +G+ K ++ TP PE +R +
Sbjct: 121 DLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWW 180
Query: 169 SFGTMLLDLLSGK 181
+ G ++ ++++G+
Sbjct: 181 ALGVLMFEMMAGR 193
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329 |
| >gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Score = 39.2 bits (91), Expect = 0.003
Identities = 49/172 (28%), Positives = 70/172 (40%), Gaps = 17/172 (9%)
Query: 31 LNLEEAKAVGNLRSERLAN-----LIGCCYE---ADERLLVAEFMPNETLAKHLFHWETQ 82
LN +E K + R+ L N L+G Y ++ V +F+ L HL +
Sbjct: 34 LNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGGELFFHLQRERSF 93
Query: 83 PMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK 142
P A R A +A AL Y S +Y DL IL D G+ L+ FGL K
Sbjct: 94 PEPRA-RFYAA-EIASALGYLHSI-NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQS 150
Query: 143 SYSTNLAFTP----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALD 190
+T TP PE +R + G +L ++L G +PP + D
Sbjct: 151 DTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYG--LPPFYCRD 200
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325 |
| >gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Score = 39.2 bits (91), Expect = 0.003
Identities = 36/142 (25%), Positives = 65/142 (45%), Gaps = 12/142 (8%)
Query: 96 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNS-RDG---KSYSTNLAFT 151
+ AL+Y S+ +Y DL ++ DKDG+ +++ FGL K +DG K++ +
Sbjct: 104 IVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYL 163
Query: 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNF-LLLMDSALEGHFS 210
PE + + G ++ +++ G+ P + D K F L+LM+ E F
Sbjct: 164 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRL--PFYNQD--HEKLFELILME---EIRFP 216
Query: 211 NDEGTELVRLASRCLQSEARER 232
E L S L+ + ++R
Sbjct: 217 RTLSPEAKSLLSGLLKKDPKQR 238
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325 |
| >gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Score = 39.3 bits (92), Expect = 0.003
Identities = 46/207 (22%), Positives = 79/207 (38%), Gaps = 60/207 (28%)
Query: 82 QPMKWAMRL------RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL- 134
Q +K A R+ ++++ + + L Y K + ++ D+ IL + G +L FG+
Sbjct: 88 QVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 147
Query: 135 ------MKNSRDG-KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKH-IPP- 185
M NS G +SY + PE ++ T +S ++S G L+++ G++ IPP
Sbjct: 148 GQLIDSMANSFVGTRSYMS------PERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPP 201
Query: 186 --------------------------SHALDLIRSKNFLLLMDSALE--------GHFSN 211
H D R L+D + G FS
Sbjct: 202 DAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFS- 260
Query: 212 DEGTELVRLASRCLQSEARERPNAKSL 238
E +CL+ +ER + K L
Sbjct: 261 ---DEFQDFVDKCLKKNPKERADLKEL 284
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308 |
| >gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Score = 39.2 bits (91), Expect = 0.003
Identities = 32/140 (22%), Positives = 62/140 (44%), Gaps = 17/140 (12%)
Query: 54 CYEADERL-LVAEFMPNETLAKHLFHW----ETQPMKWAMRLRVALYLAQALEYCSSKGR 108
C++ +RL V E++ L + E + +A + + L+ SKG
Sbjct: 69 CFQTMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLH------SKG- 121
Query: 109 ALYHDLNAYRILFDKDGNPRLSSFGLMK-NSRDG---KSYSTNLAFTPPEYMRTGRVTPE 164
+Y DL ++ D +G+ +++ FG+ K N DG K++ + PE +
Sbjct: 122 IIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAYQPYGKS 181
Query: 165 SVVYSFGTMLLDLLSGKHIP 184
++FG +L ++L+G P
Sbjct: 182 VDWWAFGVLLYEMLAG-QAP 200
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323 |
| >gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Score = 39.2 bits (91), Expect = 0.003
Identities = 57/242 (23%), Positives = 101/242 (41%), Gaps = 42/242 (17%)
Query: 26 DLGETLN-LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL-------- 76
DL + ++ +E K +G + + + NL+G C + ++ E+ L + L
Sbjct: 60 DLADLISEMELMKLIG--KHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGP 117
Query: 77 ------FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLS 130
+ + + + A +A+ +EY S+ R ++ DL A +L +D +++
Sbjct: 118 DYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR-RCIHRDLAARNVLVTEDNVMKIA 176
Query: 131 SFGLMKNSRDGKSY--STN----LAFTPPEYMRTGRVTPESVVYSFGTMLLDL--LSGKH 182
FGL + D Y ++N + + PE + T +S V+SFG ++ ++ L G
Sbjct: 177 DFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSP 236
Query: 183 IP--PSHALDLIRSKNFLLLMDSALEGHFSNDEGT---ELVRLASRCLQSEARERPNAKS 237
P P L F LL EGH + EL L C + +RP K
Sbjct: 237 YPGIPVEEL-------FKLLR----EGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQ 285
Query: 238 LV 239
LV
Sbjct: 286 LV 287
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314 |
| >gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Score = 38.8 bits (90), Expect = 0.003
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 13/156 (8%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL--FHWETQPMKWAMRL 90
L EA +G + L G + +++ E+M N L K+L E + L
Sbjct: 54 LSEASIMGQFSHHNIIRLEGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGML 113
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK--SYSTN- 147
R +A ++Y S ++ DL A IL + + ++S FGL + D +Y+T+
Sbjct: 114 R---GIAAGMKYLSDMNY-VHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSG 169
Query: 148 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS 179
+ +T PE + + T S V+SFG ++ +++S
Sbjct: 170 GKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMS 205
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268 |
| >gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Score = 38.8 bits (91), Expect = 0.003
Identities = 37/149 (24%), Positives = 66/149 (44%), Gaps = 16/149 (10%)
Query: 98 QALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----P 153
+ LEY S + ++ D+ A IL +++G +L+ FG+ D + + TP P
Sbjct: 110 KGLEYLHSN-KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTVIGTPFWMAP 168
Query: 154 EYMRTGRVTPESVVYSFGTMLLDLLSGK----HIPPSHALDLIRSKNFLLLMDSALEGHF 209
E ++ ++ ++S G +++ GK I P A+ +I +K L D +
Sbjct: 169 EVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDP---EKW 225
Query: 210 SNDEGTELVRLASRCLQSEARERPNAKSL 238
S E +CL + ERP+A L
Sbjct: 226 S----PEFNDFVKKCLVKDPEERPSAIQL 250
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256 |
| >gnl|CDD|165291 PHA02988, PHA02988, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 38.6 bits (90), Expect = 0.003
Identities = 33/169 (19%), Positives = 69/169 (40%), Gaps = 17/169 (10%)
Query: 82 QPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG 141
+ + + +L +A+ + L Y +L + L ++ ++ GL K
Sbjct: 117 KDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSP 176
Query: 142 KSYSTN-LAFTPPEYMRT--GRVTPESVVYSFGTMLLDLLSGKHIPPSHA-----LDLIR 193
+ N + + + + T + +YS G +L ++ +GK IP + DLI
Sbjct: 177 PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGK-IPFENLTTKEIYDLII 235
Query: 194 SKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISL 242
+KN L + L+ E+ + C ++ +RPN K ++ +L
Sbjct: 236 NKNNSLKLP--LDCP------LEIKCIVEACTSHDSIKRPNIKEILYNL 276
|
Length = 283 |
| >gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Score = 38.9 bits (91), Expect = 0.004
Identities = 38/156 (24%), Positives = 57/156 (36%), Gaps = 27/156 (17%)
Query: 99 ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYMRT 158
AL Y K ++ D+ IL D GN +L FG+ D K+ + + YM
Sbjct: 126 ALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAKTRSAGCAA--YMAP 183
Query: 159 GRVTPE---------SVVYSFGTMLLDLLSGKHIPPSH-------ALDLIRSKNFLLLMD 202
R+ P + V+S G L++L +G+ P L I + L
Sbjct: 184 ERIDPPDPNPKYDIRADVWSLGISLVELATGQF--PYKNCKTEFEVLTKILQEEPPSL-- 239
Query: 203 SALEGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
FS D CL + R+RP + L
Sbjct: 240 -PPNEGFSPD----FCSFVDLCLTKDHRKRPKYREL 270
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296 |
| >gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 38.6 bits (90), Expect = 0.004
Identities = 36/165 (21%), Positives = 68/165 (41%), Gaps = 33/165 (20%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL------------AKHLFHWE 80
L+EA + ++ + L+G C + + L+ + MP L +++L +W
Sbjct: 57 LDEAYVMASVDHPHVVRLLGICL-SSQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWC 115
Query: 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKN-SR 139
Q +A+ + Y K R ++ DL A +L + +++ FGL K
Sbjct: 116 VQ-------------IAKGMSYLEEK-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLDV 161
Query: 140 DGKSYSTNLAFTP-----PEYMRTGRVTPESVVYSFGTMLLDLLS 179
D K Y P E + T +S V+S+G + +L++
Sbjct: 162 DEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMT 206
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279 |
| >gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 38.5 bits (89), Expect = 0.004
Identities = 49/240 (20%), Positives = 99/240 (41%), Gaps = 24/240 (10%)
Query: 20 SVLESSDLGETLN-LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL-- 76
+V E++ + E + L EA + + L+G + L++ E M L +L
Sbjct: 43 TVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS 102
Query: 77 FHWETQ------PMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLS 130
E + P +++A +A + Y ++ + ++ DL A + +D ++
Sbjct: 103 LRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIG 161
Query: 131 SFGLMKN------SRDGKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
FG+ ++ R G + + PE ++ G T S V+SFG +L ++ + P
Sbjct: 162 DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP 221
Query: 185 PSHALDLIRSKNFLLLMDSALEGHFSN--DEGTELVRLASRCLQSEARERPNAKSLVISL 242
+ + +M+ L N D EL+R+ C Q + RP+ ++ S+
Sbjct: 222 YQ---GMSNEQVLRFVMEGGLLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSI 275
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277 |
| >gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Score = 38.4 bits (89), Expect = 0.004
Identities = 41/169 (24%), Positives = 71/169 (42%), Gaps = 30/169 (17%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL----------AKHLFHWETQP- 83
EA+ + L+ + + G C E L+V E+M + L AK L E
Sbjct: 57 EAELLTVLQHQHIVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAP 116
Query: 84 --MKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG 141
+ L +A +A + Y +S ++ DL L + ++ FG+ SRD
Sbjct: 117 GQLTLGQMLAIASQIASGMVYLASL-HFVHRDLATRNCLVGQGLVVKIGDFGM---SRD- 171
Query: 142 KSYSTN-----------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS 179
YST+ + + PPE + + T ES ++SFG +L ++ +
Sbjct: 172 -IYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFT 219
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 423 | |||
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 100.0 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 100.0 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 100.0 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 100.0 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 100.0 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 100.0 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 100.0 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 100.0 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 100.0 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 100.0 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 100.0 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 100.0 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 100.0 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 100.0 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 100.0 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 100.0 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 100.0 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 100.0 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 100.0 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 100.0 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 100.0 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 100.0 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 100.0 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 100.0 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 100.0 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 100.0 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 100.0 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 100.0 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 100.0 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 100.0 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 100.0 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 100.0 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 100.0 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 100.0 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 100.0 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 100.0 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 100.0 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 100.0 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 100.0 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 100.0 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 100.0 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 100.0 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 100.0 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 100.0 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 100.0 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 100.0 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 100.0 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 100.0 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 100.0 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 100.0 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 100.0 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 100.0 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 100.0 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 100.0 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 100.0 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 100.0 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 100.0 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 100.0 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 100.0 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 100.0 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 100.0 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 100.0 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 100.0 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 100.0 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 100.0 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 100.0 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 100.0 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 100.0 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 100.0 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 100.0 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 100.0 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 100.0 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 100.0 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 100.0 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 100.0 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 100.0 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 100.0 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 100.0 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 100.0 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 100.0 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 100.0 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 100.0 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 100.0 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 100.0 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 100.0 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 100.0 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 100.0 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 100.0 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 100.0 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 100.0 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 100.0 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 100.0 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 100.0 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 100.0 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 100.0 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 100.0 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 100.0 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 100.0 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 100.0 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 100.0 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 100.0 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 100.0 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 100.0 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 100.0 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 100.0 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 100.0 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 100.0 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 100.0 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 100.0 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 100.0 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 100.0 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 100.0 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 100.0 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| PTZ00284 | 467 | protein kinase; Provisional | 100.0 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 100.0 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 100.0 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 100.0 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 100.0 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 100.0 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 100.0 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 100.0 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 100.0 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 100.0 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 100.0 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 100.0 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 100.0 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 100.0 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 100.0 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 100.0 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 100.0 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 100.0 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 100.0 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 100.0 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 100.0 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 100.0 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 100.0 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 100.0 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 100.0 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 100.0 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 100.0 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 100.0 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 100.0 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 100.0 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 100.0 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 100.0 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 100.0 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 100.0 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 100.0 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 100.0 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 100.0 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 100.0 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 100.0 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 100.0 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 100.0 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 100.0 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 100.0 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 100.0 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 100.0 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 100.0 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 100.0 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 100.0 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 100.0 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 100.0 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 100.0 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 100.0 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 100.0 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 100.0 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 100.0 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 100.0 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 100.0 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 100.0 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 100.0 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 100.0 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 100.0 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 100.0 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 100.0 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 99.98 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 99.97 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.97 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.97 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.97 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.97 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 99.97 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.97 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.97 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.97 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.96 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 99.96 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.96 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.96 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.96 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.95 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.95 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.95 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.94 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.92 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.92 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.91 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.9 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.89 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.88 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.87 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.87 | |
| KOG0553 | 304 | consensus TPR repeat-containing protein [General f | 99.85 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.85 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.85 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.84 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.84 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.84 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.82 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.8 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.8 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.79 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.79 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.78 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.71 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.71 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.7 | |
| KOG0548 | 539 | consensus Molecular co-chaperone STI1 [Posttransla | 99.69 | |
| KOG0548 | 539 | consensus Molecular co-chaperone STI1 [Posttransla | 99.68 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.68 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.67 | |
| KOG4234 | 271 | consensus TPR repeat-containing protein [General f | 99.67 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.66 | |
| KOG4648 | 536 | consensus Uncharacterized conserved protein, conta | 99.65 | |
| PRK15359 | 144 | type III secretion system chaperone protein SscB; | 99.64 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.64 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.62 | |
| PLN03088 | 356 | SGT1, suppressor of G2 allele of SKP1; Provisional | 99.62 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.61 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.6 | |
| KOG0543 | 397 | consensus FKBP-type peptidyl-prolyl cis-trans isom | 99.6 | |
| PRK15363 | 157 | pathogenicity island 2 chaperone protein SscA; Pro | 99.6 | |
| KOG0547 | 606 | consensus Translocase of outer mitochondrial membr | 99.56 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 99.52 | |
| PRK11189 | 296 | lipoprotein NlpI; Provisional | 99.5 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.5 | |
| TIGR02552 | 135 | LcrH_SycD type III secretion low calcium response | 99.49 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.45 | |
| PRK10370 | 198 | formate-dependent nitrite reductase complex subuni | 99.44 | |
| KOG0550 | 486 | consensus Molecular chaperone (DnaJ superfamily) [ | 99.44 | |
| KOG1125 | 579 | consensus TPR repeat-containing protein [General f | 99.43 | |
| PF13414 | 69 | TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A | 99.43 | |
| KOG4642 | 284 | consensus Chaperone-dependent E3 ubiquitin protein | 99.4 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 99.4 | |
| KOG4555 | 175 | consensus TPR repeat-containing protein [Function | 99.4 | |
| KOG0545 | 329 | consensus Aryl-hydrocarbon receptor-interacting pr | 99.39 | |
| TIGR00990 | 615 | 3a0801s09 mitochondrial precursor proteins import | 99.39 | |
| KOG0551 | 390 | consensus Hsp90 co-chaperone CNS1 (contains TPR re | 99.39 | |
| KOG0624 | 504 | consensus dsRNA-activated protein kinase inhibitor | 99.36 | |
| KOG0376 | 476 | consensus Serine-threonine phosphatase 2A, catalyt | 99.36 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 99.35 | |
| COG3063 | 250 | PilF Tfp pilus assembly protein PilF [Cell motilit | 99.33 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 99.31 | |
| PF13414 | 69 | TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A | 99.31 | |
| PF12895 | 84 | Apc3: Anaphase-promoting complex, cyclosome, subun | 99.31 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 99.3 | |
| KOG1126 | 638 | consensus DNA-binding cell division cycle control | 99.3 | |
| TIGR02795 | 119 | tol_pal_ybgF tol-pal system protein YbgF. Members | 99.3 | |
| cd00189 | 100 | TPR Tetratricopeptide repeat domain; typically con | 99.29 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 99.27 | |
| TIGR00990 | 615 | 3a0801s09 mitochondrial precursor proteins import | 99.26 | |
| KOG1308 | 377 | consensus Hsp70-interacting protein Hip/Transient | 99.24 | |
| PRK02603 | 172 | photosystem I assembly protein Ycf3; Provisional | 99.24 | |
| CHL00033 | 168 | ycf3 photosystem I assembly protein Ycf3 | 99.23 | |
| KOG0547 | 606 | consensus Translocase of outer mitochondrial membr | 99.22 | |
| PRK09782 | 987 | bacteriophage N4 receptor, outer membrane subunit; | 99.21 | |
| PLN02789 | 320 | farnesyltranstransferase | 99.2 | |
| PRK15331 | 165 | chaperone protein SicA; Provisional | 99.19 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 99.18 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.16 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 99.15 | |
| PRK12370 | 553 | invasion protein regulator; Provisional | 99.15 | |
| PF13432 | 65 | TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL | 99.15 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.14 | |
| PRK15359 | 144 | type III secretion system chaperone protein SscB; | 99.14 | |
| PF13432 | 65 | TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL | 99.14 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 99.13 | |
| PRK10370 | 198 | formate-dependent nitrite reductase complex subuni | 99.11 | |
| TIGR02521 | 234 | type_IV_pilW type IV pilus biogenesis/stability pr | 99.11 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 99.11 | |
| PRK15123 | 268 | lipopolysaccharide core heptose(I) kinase RfaP; Pr | 99.1 | |
| PRK12370 | 553 | invasion protein regulator; Provisional | 99.09 | |
| TIGR03302 | 235 | OM_YfiO outer membrane assembly lipoprotein YfiO. | 99.09 | |
| COG5010 | 257 | TadD Flp pilus assembly protein TadD, contains TPR | 99.09 | |
| KOG1126 | 638 | consensus DNA-binding cell division cycle control | 99.08 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.07 | |
| COG3063 | 250 | PilF Tfp pilus assembly protein PilF [Cell motilit | 99.05 | |
| PRK10803 | 263 | tol-pal system protein YbgF; Provisional | 99.05 | |
| KOG3741 | 655 | consensus Poly(A) ribonuclease subunit [RNA proces | 99.04 | |
| PRK11189 | 296 | lipoprotein NlpI; Provisional | 99.03 |
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-50 Score=360.55 Aligned_cols=241 Identities=17% Similarity=0.258 Sum_probs=204.5
Q ss_pred CCCCccceeeee--cceeeeeec--CCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCc-eeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVL--ESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADE-RLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~--~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~lv~e~~~~~~L~~~i 76 (423)
|+.|+||++... +.-+|.|++ ........++.+|+++++.++|||||.+||.|...+. .+++||||+||||++++
T Consensus 90 G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMDgGSLd~~~ 169 (364)
T KOG0581|consen 90 GNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMDGGSLDDIL 169 (364)
T ss_pred CCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcCCCCHHHHH
Confidence 778899998875 666777776 4455567889999999999999999999999999995 99999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHc-CCCeeeccCCCCCeeecCCCCeEEccccccccCCCC--CccccCcccCCc
Q 014484 77 FHWETQPMKWAMRLRVALYLAQALEYCSS-KGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTNLAFTPP 153 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--~~~~~t~~y~aP 153 (423)
.. .+++++...-+++.+|++||.|||+ .+ ||||||||+|||++..|.+||||||.++..... .+..||..||||
T Consensus 170 k~--~g~i~E~~L~~ia~~VL~GL~YLh~~~~-IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS~a~tfvGT~~YMsP 246 (364)
T KOG0581|consen 170 KR--VGRIPEPVLGKIARAVLRGLSYLHEERK-IIHRDIKPSNLLVNSKGEVKICDFGVSGILVNSIANTFVGTSAYMSP 246 (364)
T ss_pred hh--cCCCCHHHHHHHHHHHHHHHHHHhhccC-eeeccCCHHHeeeccCCCEEeccccccHHhhhhhcccccccccccCh
Confidence 64 4679999999999999999999996 66 999999999999999999999999999876654 568899999999
Q ss_pred cccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChh-HHHHHHHHHHHhcccCcCCC
Q 014484 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND-EGTELVRLASRCLQSEARER 232 (423)
Q Consensus 154 E~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~~cl~~dp~~R 232 (423)
|.+.+..|+.++||||||++++|+++|+.|++...........+...+-....+.+|.. +++++++||..||++||.+|
T Consensus 247 ERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R 326 (364)
T KOG0581|consen 247 ERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEGEFSPEFRSFVSCCLRKDPSER 326 (364)
T ss_pred hhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHhcCCcccC
Confidence 99999999999999999999999999998877641111222222222323344455665 89999999999999999999
Q ss_pred CCHHHHHHHHHhh
Q 014484 233 PNAKSLVISLMSL 245 (423)
Q Consensus 233 ps~~~vl~~l~~~ 245 (423)
||++++++|-.-.
T Consensus 327 ~s~~qLl~Hpfi~ 339 (364)
T KOG0581|consen 327 PSAKQLLQHPFIK 339 (364)
T ss_pred CCHHHHhcCHHHh
Confidence 9999999996543
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-49 Score=368.21 Aligned_cols=244 Identities=25% Similarity=0.383 Sum_probs=213.0
Q ss_pred CCCCccceeeeecce-eeeeecCCChhh---HHHHHHHHHHHhcCCCCCccceEeEEEeCC-ceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWFHCH-LKSSVLESSDLG---ETLNLEEAKAVGNLRSERLANLIGCCYEAD-ERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~~~~-~~~~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~lv~e~~~~~~L~~~i 76 (423)
|+||.||++.|.+.. +++|++.....+ ...|.+|+.+|.+++|||||+++|+|.+.. .+++||||+++|+|.+++
T Consensus 52 G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~GsL~~~l 131 (362)
T KOG0192|consen 52 GSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGGSLSVLL 131 (362)
T ss_pred CCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCCcHHHHH
Confidence 899999999999988 999998765543 558999999999999999999999999988 799999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCC-CeEEccccccccCCC----CCccccCcccC
Q 014484 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG-NPRLSSFGLMKNSRD----GKSYSTNLAFT 151 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~-~~kl~Dfg~~~~~~~----~~~~~~t~~y~ 151 (423)
.....+.+++..+++|+.||++||.|||++++||||||||+|||++.++ ++||+|||+++.... .....||+.||
T Consensus 132 ~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~~~~~~~GT~~wM 211 (362)
T KOG0192|consen 132 HKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISKTSMTSVAGTYRWM 211 (362)
T ss_pred hhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeeccccccccCCCCCcccc
Confidence 6544678999999999999999999999998689999999999999998 999999999976553 23367899999
Q ss_pred Cccccc--cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCc
Q 014484 152 PPEYMR--TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEA 229 (423)
Q Consensus 152 aPE~~~--~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 229 (423)
|||++. ...|+.|+||||||+++|||+||..||..... .+....+.....+..++..+++.+..++.+||..||
T Consensus 212 APEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~----~~~~~~v~~~~~Rp~~p~~~~~~l~~l~~~CW~~dp 287 (362)
T KOG0192|consen 212 APEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP----VQVASAVVVGGLRPPIPKECPPHLSSLMERCWLVDP 287 (362)
T ss_pred ChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH----HHHHHHHHhcCCCCCCCccCCHHHHHHHHHhCCCCC
Confidence 999999 56899999999999999999999999887532 222333334455566677788999999999999999
Q ss_pred CCCCCHHHHHHHHHhhhhhc
Q 014484 230 RERPNAKSLVISLMSLQKEA 249 (423)
Q Consensus 230 ~~Rps~~~vl~~l~~~~~~~ 249 (423)
..||++.+++..|..+....
T Consensus 288 ~~RP~f~ei~~~l~~~~~~~ 307 (362)
T KOG0192|consen 288 SRRPSFLEIVSRLESIMSHI 307 (362)
T ss_pred CcCCCHHHHHHHHHHHHHhh
Confidence 99999999999999887653
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-48 Score=349.34 Aligned_cols=239 Identities=17% Similarity=0.173 Sum_probs=197.4
Q ss_pred CCCCccceeeee--cceeeeeecCCChhh--------HHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLG--------ETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNET 71 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~--------~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 71 (423)
|+||.|-.+... +..+|+|++.+.+.. .....+|+++|++|+|||||+++++|+..+..||||||+.||+
T Consensus 183 Gafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~YmVlE~v~GGe 262 (475)
T KOG0615|consen 183 GAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSSYMVLEYVEGGE 262 (475)
T ss_pred CceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCceEEEEEEecCcc
Confidence 889988888774 788999888664432 2235799999999999999999999999999999999999999
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCC---CCeEEccccccccCCCC---Cccc
Q 014484 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKD---GNPRLSSFGLMKNSRDG---KSYS 145 (423)
Q Consensus 72 L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~---~~~kl~Dfg~~~~~~~~---~~~~ 145 (423)
|.+++-. ++.+.+.....++.|++.|+.|||++| |+||||||+|||+..+ ..+||+|||+|+..... .+.+
T Consensus 263 Lfd~vv~--nk~l~ed~~K~~f~Qll~avkYLH~~G-I~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~~sfm~TlC 339 (475)
T KOG0615|consen 263 LFDKVVA--NKYLREDLGKLLFKQLLTAVKYLHSQG-IIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGEGSFMKTLC 339 (475)
T ss_pred HHHHHHh--ccccccchhHHHHHHHHHHHHHHHHcC-cccccCCcceEEeccCCcceEEEecccchhhccccceehhhhc
Confidence 9999964 667888899999999999999999999 9999999999999766 67999999999987643 5689
Q ss_pred cCcccCCccccccCC---CCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHH
Q 014484 146 TNLAFTPPEYMRTGR---VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLAS 222 (423)
Q Consensus 146 ~t~~y~aPE~~~~~~---~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 222 (423)
||+.|.|||++.+.. +..+.|+||+||+||-+++|.+||..+.....-.+.+... .....+.....++++..+||.
T Consensus 340 GTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G-~y~f~p~~w~~Iseea~dlI~ 418 (475)
T KOG0615|consen 340 GTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKG-RYAFGPLQWDRISEEALDLIN 418 (475)
T ss_pred CCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcC-cccccChhhhhhhHHHHHHHH
Confidence 999999999998765 3448899999999999999999998764333111111111 111222233467899999999
Q ss_pred HhcccCcCCCCCHHHHHHHHHh
Q 014484 223 RCLQSEARERPNAKSLVISLMS 244 (423)
Q Consensus 223 ~cl~~dp~~Rps~~~vl~~l~~ 244 (423)
+||..||++|||+.|+|+|.+-
T Consensus 419 ~mL~VdP~~R~s~~eaL~hpW~ 440 (475)
T KOG0615|consen 419 WMLVVDPENRPSADEALNHPWF 440 (475)
T ss_pred HhhEeCcccCcCHHHHhcChhh
Confidence 9999999999999999999654
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-48 Score=333.69 Aligned_cols=238 Identities=16% Similarity=0.220 Sum_probs=196.5
Q ss_pred CCCCccceeeee--cceeeeeecCCC---hhhHHHHHHHHHHHhcCCCCCccceEe-EEEeCCc-eeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIG-CCYEADE-RLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~-~~~~~~~-~~lv~e~~~~~~L~~ 74 (423)
|+||.||++.+. +..++.|-+... ...++....|+.+|++|+|||||++++ .|.+++. ++||||||.+|+|.+
T Consensus 30 GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivmE~c~~GDLsq 109 (375)
T KOG0591|consen 30 GSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVMELCDAGDLSQ 109 (375)
T ss_pred CcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHHHhhcccCHHH
Confidence 899999999875 555555554432 234667889999999999999999999 5655555 889999999999999
Q ss_pred hhcc--CCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCeeeccCCCCCeeecCCCCeEEccccccccCCCCC----ccc
Q 014484 75 HLFH--WETQPMKWAMRLRVALYLAQALEYCSSK---GRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK----SYS 145 (423)
Q Consensus 75 ~i~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~----~~~ 145 (423)
.|++ ..++.+++..+|+++.|+|+||..+|++ +.|+||||||.||+++.+|.+||+|||+++...... +.+
T Consensus 110 mIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~~tfA~S~V 189 (375)
T KOG0591|consen 110 MIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSKTTFAHSLV 189 (375)
T ss_pred HHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhcchhHHHHhhc
Confidence 9973 3567899999999999999999999982 339999999999999999999999999999887654 568
Q ss_pred cCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCC-hhHHHHHHHHHHHh
Q 014484 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFS-NDEGTELVRLASRC 224 (423)
Q Consensus 146 ~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~c 224 (423)
|||.||+||.+.+.+|++||||||+||++|||+.-++||.+...... -..+...-.++.| ..+|.++..+|..|
T Consensus 190 GTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L-----~~KI~qgd~~~~p~~~YS~~l~~li~~c 264 (375)
T KOG0591|consen 190 GTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSL-----CKKIEQGDYPPLPDEHYSTDLRELINMC 264 (375)
T ss_pred CCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHH-----HHHHHcCCCCCCcHHHhhhHHHHHHHHH
Confidence 99999999999999999999999999999999999999988632222 1222222233344 56799999999999
Q ss_pred cccCcCCCCCHHHHHHHHHh
Q 014484 225 LQSEARERPNAKSLVISLMS 244 (423)
Q Consensus 225 l~~dp~~Rps~~~vl~~l~~ 244 (423)
+..||..||+.-.++..+..
T Consensus 265 i~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 265 IAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred ccCCcccCCCcchHHHHHHH
Confidence 99999999997666655443
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-47 Score=341.77 Aligned_cols=236 Identities=17% Similarity=0.211 Sum_probs=199.0
Q ss_pred CCCCCccceeeee--cceeeeeecCCCh---hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 1 MGGRCSKFSICWF--HCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 1 ~G~~g~v~~~~~~--~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
+|+||.||++... +..|++|.+.... ...+.+..|+.+|+.++|||||+++++++.++.+|+|||||.||+|.++
T Consensus 20 ~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVMEyC~gGDLs~y 99 (429)
T KOG0595|consen 20 SGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVMEYCNGGDLSDY 99 (429)
T ss_pred CcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEEeCCCCCHHHH
Confidence 6999999999985 7788888876653 3466778999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCC------CCeEEccccccccCCCC---Ccccc
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKD------GNPRLSSFGLMKNSRDG---KSYST 146 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~------~~~kl~Dfg~~~~~~~~---~~~~~ 146 (423)
|++ .+.+++..+..++.||+.||++||+++ ||||||||.|||++.. -.+||+|||+++....+ .+.+|
T Consensus 100 i~~--~~~l~e~t~r~Fm~QLA~alq~L~~~~-IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~~a~tlcG 176 (429)
T KOG0595|consen 100 IRR--RGRLPEATARHFMQQLASALQFLHENN-IIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGSMAETLCG 176 (429)
T ss_pred HHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchhHHHHhhC
Confidence 964 557999999999999999999999999 9999999999999765 35899999999988866 45789
Q ss_pred CcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcc
Q 014484 147 NLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (423)
Q Consensus 147 t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (423)
++.|||||++..++|+.|+|+||+|+++|+|++|.+||.......... .-.........++...+..+.+++...++
T Consensus 177 SplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~---~~~k~~~~~~~~~~~~s~~~~~Ll~~ll~ 253 (429)
T KOG0595|consen 177 SPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLL---YIKKGNEIVPVLPAELSNPLRELLISLLQ 253 (429)
T ss_pred CccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHH---HHhccccccCchhhhccCchhhhhhHHHh
Confidence 999999999999999999999999999999999999988653332222 11111222333444556678899999999
Q ss_pred cCcCCCCCHHHHHHHH
Q 014484 227 SEARERPNAKSLVISL 242 (423)
Q Consensus 227 ~dp~~Rps~~~vl~~l 242 (423)
.+|.+|.++.+...+.
T Consensus 254 ~~~~~~~~~~~~~~~~ 269 (429)
T KOG0595|consen 254 RNPKDRISFEDFFDHP 269 (429)
T ss_pred cCccccCchHHhhhhh
Confidence 9999998888877664
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-46 Score=354.99 Aligned_cols=234 Identities=16% Similarity=0.195 Sum_probs=205.5
Q ss_pred CCCCccceeee--ecceeeeeecCC----ChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICW--FHCHLKSSVLES----SDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~--~~~~~~~~~~~~----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|||+.+|.+.. .+..+|+|++++ +....+...+||++.++|+|||||+++++|++.+.+|||.|+|+.++|.++
T Consensus 29 GgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivLELC~~~sL~el 108 (592)
T KOG0575|consen 29 GGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVLELCHRGSLMEL 108 (592)
T ss_pred CcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEEEecCCccHHHH
Confidence 99999999998 388899999877 555677889999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCC----CCccccCcccC
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNLAFT 151 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~~t~~y~ 151 (423)
+++ .+.+++.++..+++||+.||.|||+++ |||||||..|+|++++.++||+|||||..... ..+.+||+.|.
T Consensus 109 ~Kr--rk~ltEpEary~l~QIv~GlkYLH~~~-IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Erk~TlCGTPNYI 185 (592)
T KOG0575|consen 109 LKR--RKPLTEPEARYFLRQIVEGLKYLHSLG-IIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGERKKTLCGTPNYI 185 (592)
T ss_pred HHh--cCCCCcHHHHHHHHHHHHHHHHHHhcC-ceecccchhheeecCcCcEEecccceeeeecCcccccceecCCCccc
Confidence 963 568999999999999999999999999 99999999999999999999999999987763 35678999999
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCC
Q 014484 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARE 231 (423)
Q Consensus 152 aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (423)
|||++.....+..+||||+||++|-|+.|++||.......+- ..+.. ..-..|..++.+..+||.++|+.||.+
T Consensus 186 APEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety----~~Ik~--~~Y~~P~~ls~~A~dLI~~lL~~~P~~ 259 (592)
T KOG0575|consen 186 APEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETY----NKIKL--NEYSMPSHLSAEAKDLIRKLLRPNPSE 259 (592)
T ss_pred ChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHH----HHHHh--cCcccccccCHHHHHHHHHHhcCCccc
Confidence 999999999999999999999999999999998775322221 11111 112345677889999999999999999
Q ss_pred CCCHHHHHHHHHh
Q 014484 232 RPNAKSLVISLMS 244 (423)
Q Consensus 232 Rps~~~vl~~l~~ 244 (423)
|||+++|+.|-.-
T Consensus 260 Rpsl~~vL~h~Ff 272 (592)
T KOG0575|consen 260 RPSLDEVLDHPFF 272 (592)
T ss_pred CCCHHHHhcCHhh
Confidence 9999999988544
|
|
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-46 Score=349.36 Aligned_cols=241 Identities=24% Similarity=0.366 Sum_probs=217.2
Q ss_pred CCCCccceeeeecc-eeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccCC
Q 014484 2 GGRCSKFSICWFHC-HLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80 (423)
Q Consensus 2 G~~g~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~ 80 (423)
|-||.|+.+.|.+. .+++|.+.......+.|.+|+++|++|+|+|||+++++|..++.+||||||++.|+|.+++++..
T Consensus 217 G~FG~V~~g~~~~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsLl~yLr~~~ 296 (468)
T KOG0197|consen 217 GQFGEVWLGKWNGSTKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSLLDYLRTRE 296 (468)
T ss_pred CccceEEEEEEcCCCcccceEEeccccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcHHHHhhhcC
Confidence 78999999999866 88998888877778899999999999999999999999999999999999999999999998767
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCCcc-----ccCcccCCccc
Q 014484 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY-----STNLAFTPPEY 155 (423)
Q Consensus 81 ~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~-----~~t~~y~aPE~ 155 (423)
+..+...+.+.++.|||.|++||++++ +|||||-+.||||++++.+||+|||+++...+.... .-++.|+|||.
T Consensus 297 ~~~l~~~~Ll~~a~qIaeGM~YLes~~-~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~kfPIkWtAPEa 375 (468)
T KOG0197|consen 297 GGLLNLPQLLDFAAQIAEGMAYLESKN-YIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEGGKFPIKWTAPEA 375 (468)
T ss_pred CCccchHHHHHHHHHHHHHHHHHHhCC-ccchhhhhhheeeccCceEEEcccccccccCCCceeecCCCCCCceecCHHH
Confidence 888999999999999999999999999 999999999999999999999999999965544221 22578999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhhCC-CCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCC
Q 014484 156 MRTGRVTPESVVYSFGTMLLDLLSGK-HIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (423)
Q Consensus 156 ~~~~~~~~~~Di~slG~~l~el~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (423)
+..+.++.||||||||++||||+|-. .|+++ +.+..+...+....+-+.|..||.++.+++..||..+|++|||
T Consensus 376 ~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~-----msn~ev~~~le~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPt 450 (468)
T KOG0197|consen 376 LNYGKFSSKSDVWSFGVLLWELFTYGRVPYPG-----MSNEEVLELLERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPT 450 (468)
T ss_pred HhhCCcccccceeehhhhHHHHhccCCCCCCC-----CCHHHHHHHHhccCcCCCCCCCCHHHHHHHHHHhhCCcccCCC
Confidence 99999999999999999999999954 45454 6677788888888888899999999999999999999999999
Q ss_pred HHHHHHHHHhhhhh
Q 014484 235 AKSLVISLMSLQKE 248 (423)
Q Consensus 235 ~~~vl~~l~~~~~~ 248 (423)
++.+...++.+...
T Consensus 451 F~~L~~~l~~~~~~ 464 (468)
T KOG0197|consen 451 FETLREVLEDFFTS 464 (468)
T ss_pred HHHHHHHHHHhhhc
Confidence 99998888776543
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-46 Score=335.93 Aligned_cols=242 Identities=20% Similarity=0.300 Sum_probs=197.5
Q ss_pred CCCCccceeeee--cceeeeeecCCChh-hHHHHHHHHHHHhcCCCCCccceEeEEEeCC--ceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDL-GETLNLEEAKAVGNLRSERLANLIGCCYEAD--ERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv~e~~~~~~L~~~i 76 (423)
|+||.||.+... +...++|....... ..+.+.+|+.+|.+++|||||+++|...... .+++.|||+++|+|.+++
T Consensus 28 Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~~~GsL~~~~ 107 (313)
T KOG0198|consen 28 GSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYAPGGSLSDLI 107 (313)
T ss_pred ccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeeccCCCcHHHHH
Confidence 899999999986 46667766544321 1566889999999999999999999865555 588999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecC-CCCeEEccccccccCCC-------CCccccCc
Q 014484 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK-DGNPRLSSFGLMKNSRD-------GKSYSTNL 148 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~-~~~~kl~Dfg~~~~~~~-------~~~~~~t~ 148 (423)
.+..+ .+++..+.++..||+.||.|||++| ||||||||+|||++. ++.+||+|||+++.... .....||+
T Consensus 108 ~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~g-~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp 185 (313)
T KOG0198|consen 108 KRYGG-KLPEPLVRRYTRQILEGLAYLHSKG-IVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKSDSELSVQGTP 185 (313)
T ss_pred HHcCC-CCCHHHHHHHHHHHHHHHHHHHhCC-EeccCcccceEEEeCCCCeEEeccCccccccccccccccccccccCCc
Confidence 86544 7999999999999999999999999 999999999999999 79999999999886552 23467999
Q ss_pred ccCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhccc
Q 014484 149 AFTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQS 227 (423)
Q Consensus 149 ~y~aPE~~~~~-~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 227 (423)
.|||||++..+ ...+++|||||||++.||+||.+||... ................+.+|..++.+..+|+.+|+.+
T Consensus 186 ~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~---~~~~~~~~~ig~~~~~P~ip~~ls~~a~~Fl~~C~~~ 262 (313)
T KOG0198|consen 186 NYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF---FEEAEALLLIGREDSLPEIPDSLSDEAKDFLRKCFKR 262 (313)
T ss_pred cccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh---cchHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhhc
Confidence 99999999853 3445999999999999999998887653 0111222222222334477788899999999999999
Q ss_pred CcCCCCCHHHHHHHHHhhhhh
Q 014484 228 EARERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 228 dp~~Rps~~~vl~~l~~~~~~ 248 (423)
||+.|||+++++.|.......
T Consensus 263 ~p~~Rpta~eLL~hpf~~~~~ 283 (313)
T KOG0198|consen 263 DPEKRPTAEELLEHPFLKQNS 283 (313)
T ss_pred CcccCcCHHHHhhChhhhccc
Confidence 999999999999997654433
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-46 Score=346.05 Aligned_cols=234 Identities=18% Similarity=0.288 Sum_probs=202.1
Q ss_pred CCCCccceeeee--cceeeeeecCCChhh-HHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLG-ETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
|+.|.||.+... +..||+|++....+. ++.+++|+.+|+..+|+|||.+++.|..++.+|+||||++||+|.+.+.
T Consensus 284 gaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~ggsLTDvVt- 362 (550)
T KOG0578|consen 284 GATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYMEGGSLTDVVT- 362 (550)
T ss_pred ccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecCCCchhhhhh-
Confidence 788999999874 677899998887765 5567899999999999999999999999999999999999999999994
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccCCcc
Q 014484 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPPE 154 (423)
Q Consensus 79 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~aPE 154 (423)
...+++.++..|+++++.||+|||.+| |+|||||.+|||++.+|.+||+|||++...... .+..||+.|||||
T Consensus 363 --~~~~~E~qIA~Icre~l~aL~fLH~~g-IiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~TmVGTPYWMAPE 439 (550)
T KOG0578|consen 363 --KTRMTEGQIAAICREILQGLKFLHARG-IIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRSTMVGTPYWMAPE 439 (550)
T ss_pred --cccccHHHHHHHHHHHHHHHHHHHhcc-eeeeccccceeEeccCCcEEEeeeeeeeccccccCccccccCCCCccchh
Confidence 456999999999999999999999999 999999999999999999999999999877654 4567999999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhcc-ccccCCCChhHHHHHHHHHHHhcccCcCCCC
Q 014484 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD-SALEGHFSNDEGTELVRLASRCLQSEARERP 233 (423)
Q Consensus 155 ~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 233 (423)
+.....|++|.||||||++++||+.|.+||.... .-+.+..+.. ....-..+..+++.+++|+.+||+.|+.+|+
T Consensus 440 Vvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~----PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~Ra 515 (550)
T KOG0578|consen 440 VVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNEN----PLRALYLIATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRA 515 (550)
T ss_pred hhhhcccCccccchhhhhHHHHHhcCCCCccCCC----hHHHHHHHhhcCCCCcCCccccCHHHHHHHHHHhhcchhcCC
Confidence 9999999999999999999999999999987531 1111111111 1222234556789999999999999999999
Q ss_pred CHHHHHHHHH
Q 014484 234 NAKSLVISLM 243 (423)
Q Consensus 234 s~~~vl~~l~ 243 (423)
|+.|+|+|--
T Consensus 516 sA~eLL~HpF 525 (550)
T KOG0578|consen 516 SAKELLEHPF 525 (550)
T ss_pred CHHHHhcChh
Confidence 9999998843
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-45 Score=326.45 Aligned_cols=232 Identities=19% Similarity=0.240 Sum_probs=196.9
Q ss_pred CCCCccceeeee--cceeeeeecCCChh----hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDL----GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.-. +.-+|.|++.+... +......|..+|..++||+||.++-.|.+.+.+|+|+||+.||.|..+
T Consensus 36 G~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylVld~~~GGeLf~h 115 (357)
T KOG0598|consen 36 GSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLVLDYLNGGELFYH 115 (357)
T ss_pred cCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEEEeccCCccHHHH
Confidence 899999988764 66678888766553 355678899999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCC----CCCccccCcccC
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSR----DGKSYSTNLAFT 151 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~----~~~~~~~t~~y~ 151 (423)
|++ .+.+++..+.-++.+|+.||.|||++| ||||||||+|||+|.+|+++|+|||+++... ...+.+||+.||
T Consensus 116 L~~--eg~F~E~~arfYlaEi~lAL~~LH~~g-IiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~~t~tfcGT~eYm 192 (357)
T KOG0598|consen 116 LQR--EGRFSEDRARFYLAEIVLALGYLHSKG-IIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGDATRTFCGTPEYM 192 (357)
T ss_pred HHh--cCCcchhHHHHHHHHHHHHHHHHHhCC-eeeccCCHHHeeecCCCcEEEeccccchhcccCCCccccccCCcccc
Confidence 964 667999999999999999999999999 9999999999999999999999999998543 235578999999
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCC
Q 014484 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARE 231 (423)
Q Consensus 152 aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (423)
|||++.+.+|+..+|+||||+++|||++|.+||.......+..... .......+.-++.+.+++++++|++||++
T Consensus 193 APEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~-----~~k~~~~p~~ls~~ardll~~LL~rdp~~ 267 (357)
T KOG0598|consen 193 APEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKIL-----KGKLPLPPGYLSEEARDLLKKLLKRDPRQ 267 (357)
T ss_pred ChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHh-----cCcCCCCCccCCHHHHHHHHHHhccCHHH
Confidence 9999999999999999999999999999999998764332222211 11122344447889999999999999999
Q ss_pred CC----CHHHHHHH
Q 014484 232 RP----NAKSLVIS 241 (423)
Q Consensus 232 Rp----s~~~vl~~ 241 (423)
|. ++++|.+|
T Consensus 268 RLg~~~d~~~ik~H 281 (357)
T KOG0598|consen 268 RLGGPGDAEEIKRH 281 (357)
T ss_pred hcCCCCChHHhhcC
Confidence 94 66776655
|
|
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-44 Score=337.92 Aligned_cols=245 Identities=33% Similarity=0.546 Sum_probs=206.6
Q ss_pred CCCCccceeeeec-ceeeeeecCCChhh-HHHHHHHHHHHhcCCCCCccceEeEEEeCC-ceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICWFH-CHLKSSVLESSDLG-ETLNLEEAKAVGNLRSERLANLIGCCYEAD-ERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~~~-~~~~~~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~lv~e~~~~~~L~~~i~~ 78 (423)
||||.||++...+ ..+++|++...... ..+|.+|+.++.+++|||||+++|||.+++ +.+||+||+++|+|.+++..
T Consensus 86 Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~LVYEym~nGsL~d~L~~ 165 (361)
T KOG1187|consen 86 GGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYCLEGGEHRLLVYEYMPNGSLEDHLHG 165 (361)
T ss_pred CCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEEecCCceEEEEEEccCCCCHHHHhCC
Confidence 8999999999865 88999988776543 556999999999999999999999999999 49999999999999999975
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCC--CeeeccCCCCCeeecCCCCeEEccccccccCCC-CCcc----ccCcccC
Q 014484 79 WETQPMKWAMRLRVALYLAQALEYCSSKG--RALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD-GKSY----STNLAFT 151 (423)
Q Consensus 79 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~-~~~~----~~t~~y~ 151 (423)
....+++|...++|+.++++||.|||... +||||||||+|||+|.++++||+|||+++.... .... .||.+|+
T Consensus 166 ~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~ 245 (361)
T KOG1187|consen 166 KKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEGDTSVSTTVMGTFGYL 245 (361)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCccccceeeecCCCCccC
Confidence 33328999999999999999999999965 499999999999999999999999999976654 3222 7899999
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhhCCCCCCch-----------hhHHhhhchhhhhcccccc-CCCCh-hHHHHHH
Q 014484 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSH-----------ALDLIRSKNFLLLMDSALE-GHFSN-DEGTELV 218 (423)
Q Consensus 152 aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~-----------~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~l~ 218 (423)
+||++..+..+.|+||||||+++.||+||+.+.... .........+..++++.+. ..++. ..-..+.
T Consensus 246 ~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~ 325 (361)
T KOG1187|consen 246 APEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLA 325 (361)
T ss_pred ChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHH
Confidence 999999899999999999999999999999765421 1122333456677777766 45553 4556688
Q ss_pred HHHHHhcccCcCCCCCHHHHHHHHHhhh
Q 014484 219 RLASRCLQSEARERPNAKSLVISLMSLQ 246 (423)
Q Consensus 219 ~li~~cl~~dp~~Rps~~~vl~~l~~~~ 246 (423)
.+..+|++.+|..||++.+|++.|..+.
T Consensus 326 ~~a~~C~~~~~~~RP~m~~Vv~~L~~~~ 353 (361)
T KOG1187|consen 326 ELALRCLRPDPKERPTMSQVVKELEGIL 353 (361)
T ss_pred HHHHHHcCcCCCcCcCHHHHHHHHHhhc
Confidence 9999999999999999999999885544
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-45 Score=318.42 Aligned_cols=236 Identities=18% Similarity=0.270 Sum_probs=190.7
Q ss_pred CCCCccceeeee--cceeeeeecCCChhh---HHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLG---ETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
||||.||++... |.-||+|.|..++.+ .+-.++||++|++|+|||+|.++++|.....+++|+|||+..-| +.+
T Consensus 13 GSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~~dhTvL-~eL 91 (396)
T KOG0593|consen 13 GSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEYCDHTVL-HEL 91 (396)
T ss_pred CcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeeecchHHH-HHH
Confidence 899999999875 788999888665543 55678999999999999999999999999999999999988444 445
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccCC
Q 014484 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTP 152 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~a 152 (423)
.+ ....++.+.+.+++.|++.|+.|+|+++ +|||||||+|||++.+|.+||||||+|+..... ...+.|.+|.|
T Consensus 92 e~-~p~G~~~~~vk~~l~Q~l~ai~~cHk~n-~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YTDYVATRWYRa 169 (396)
T KOG0593|consen 92 ER-YPNGVPSELVKKYLYQLLKAIHFCHKNN-CIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYTDYVATRWYRA 169 (396)
T ss_pred Hh-ccCCCCHHHHHHHHHHHHHHhhhhhhcC-eecccCChhheEEecCCcEEeccchhhHhhcCCcchhhhhhhhhhccC
Confidence 44 3446899999999999999999999999 999999999999999999999999999987733 23567999999
Q ss_pred cccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhh-------------------chhhhhc-ccc------c
Q 014484 153 PEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRS-------------------KNFLLLM-DSA------L 205 (423)
Q Consensus 153 PE~~~~-~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~-------------------~~~~~~~-~~~------~ 205 (423)
||.+.| .+|+...|||++||++.||++|.+.||+.+.-..-. ..+...+ -+. +
T Consensus 170 PELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epL 249 (396)
T KOG0593|consen 170 PELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPL 249 (396)
T ss_pred hhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccch
Confidence 999887 569999999999999999999999998763211110 0000000 000 0
Q ss_pred cCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014484 206 EGHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (423)
Q Consensus 206 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~ 241 (423)
...+ +..+.-+.+|+..||++||++|+|.++++.|
T Consensus 250 e~k~-p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H 284 (396)
T KOG0593|consen 250 ERKY-PKISNVLLDLLKKCLKMDPDDRLSCEQLLHH 284 (396)
T ss_pred hhhc-ccchHHHHHHHHHHhcCCccccccHHHHhcC
Confidence 0011 1245678999999999999999999999977
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-45 Score=333.39 Aligned_cols=238 Identities=18% Similarity=0.211 Sum_probs=197.8
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHH--HHHHHHHHHhcCC-CCCccceEeEEEeCC-ceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGET--LNLEEAKAVGNLR-SERLANLIGCCYEAD-ERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~--~~~~E~~~l~~l~-h~niv~~~~~~~~~~-~~~lv~e~~~~~~L~~~ 75 (423)
|.||.||.++.. +..||+|.+.++-...+ .-+||++.|++|+ ||||+++.+++.+.+ .+|+|||||+. +|.+.
T Consensus 21 GTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVfE~Md~-NLYqL 99 (538)
T KOG0661|consen 21 GTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVFEFMDC-NLYQL 99 (538)
T ss_pred CcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeHHhhhh-hHHHH
Confidence 899999999985 77799988877665433 3479999999998 999999999999988 89999999976 99999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC---CccccCcccCC
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTP 152 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~~t~~y~a 152 (423)
++++ ++.|++..+..|+.||+.||+|+|.+| +.|||+||+|||+..+..+||+|||+||...+. ...+.|.+|+|
T Consensus 100 mK~R-~r~fse~~irnim~QilqGL~hiHk~G-fFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpPYTeYVSTRWYRA 177 (538)
T KOG0661|consen 100 MKDR-NRLFSESDIRNIMYQILQGLAHIHKHG-FFHRDLKPENILISGNDVIKIADFGLAREVRSKPPYTEYVSTRWYRA 177 (538)
T ss_pred Hhhc-CCcCCHHHHHHHHHHHHHHHHHHHhcC-cccccCChhheEecccceeEecccccccccccCCCcchhhhcccccc
Confidence 9876 789999999999999999999999999 999999999999998889999999999988765 44678999999
Q ss_pred ccccc-cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhh-----------------chhhhhcc--------cccc
Q 014484 153 PEYMR-TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRS-----------------KNFLLLMD--------SALE 206 (423)
Q Consensus 153 PE~~~-~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~-----------------~~~~~~~~--------~~~~ 206 (423)
||++. .+.|+.+.|+|++|||++|+.+-++.|++...-.... ..+...+. ..+.
T Consensus 178 PEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~ 257 (538)
T KOG0661|consen 178 PEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLK 257 (538)
T ss_pred hHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChH
Confidence 99876 4569999999999999999999999998753221111 11111111 1111
Q ss_pred CCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 207 GHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 207 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
..+ +..++++.++|.+||.+||.+|||++++++|.-
T Consensus 258 ~L~-p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pf 293 (538)
T KOG0661|consen 258 DLL-PNASSEAASLIERLLAWDPDKRPTASQALQHPF 293 (538)
T ss_pred HhC-cccCHHHHHHHHHHhcCCCccCccHHHHhcCcc
Confidence 112 236789999999999999999999999999853
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-44 Score=330.12 Aligned_cols=232 Identities=21% Similarity=0.259 Sum_probs=202.3
Q ss_pred CCCCccceeeee--cceeeeeecCCChhh----HHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLG----ETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~----~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|+|+.||++... +..+|+|++.+...- .+...+|-.+|.+| .||.|++++..|.+...+|+|+||+++|+|.+
T Consensus 84 GSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFvLe~A~nGdll~ 163 (604)
T KOG0592|consen 84 GSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFVLEYAPNGDLLD 163 (604)
T ss_pred ccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEEEEecCCCcHHH
Confidence 899999999985 788999998775533 44667899999999 89999999999999999999999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCC--------------
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD-------------- 140 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~-------------- 140 (423)
+|.+ -+.|++..+..++.||+.||+|||++| ||||||||+|||+|.+|+++|+|||.++.+.+
T Consensus 164 ~i~K--~Gsfde~caR~YAAeIldAleylH~~G-IIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~~~~~~~~~~a 240 (604)
T KOG0592|consen 164 LIKK--YGSFDETCARFYAAEILDALEYLHSNG-IIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKSQENPVDPNQA 240 (604)
T ss_pred HHHH--hCcchHHHHHHHHHHHHHHHHHHHhcC-ceeccCChhheeEcCCCcEEEeeccccccCChhhccccCccCcccc
Confidence 9975 567999999999999999999999999 99999999999999999999999999885542
Q ss_pred ---CCccccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHH
Q 014484 141 ---GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTEL 217 (423)
Q Consensus 141 ---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 217 (423)
..+++||-.|.+||.+.++..++.+|||+||||+|+|+.|.+||.......+ +..++ .+.-.+++..++.+
T Consensus 241 ~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Neyli----FqkI~--~l~y~fp~~fp~~a 314 (604)
T KOG0592|consen 241 SSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLI----FQKIQ--ALDYEFPEGFPEDA 314 (604)
T ss_pred cCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHH----HHHHH--HhcccCCCCCCHHH
Confidence 1347899999999999999999999999999999999999999887533222 22222 23345777788999
Q ss_pred HHHHHHhcccCcCCCCCHHHHHHHH
Q 014484 218 VRLASRCLQSEARERPNAKSLVISL 242 (423)
Q Consensus 218 ~~li~~cl~~dp~~Rps~~~vl~~l 242 (423)
.+||+++|..||.+|++.++|.+|.
T Consensus 315 ~dLv~KLLv~dp~~Rlt~~qIk~Hp 339 (604)
T KOG0592|consen 315 RDLIKKLLVRDPSDRLTSQQIKAHP 339 (604)
T ss_pred HHHHHHHHccCccccccHHHHhhCc
Confidence 9999999999999999999999884
|
|
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-42 Score=320.61 Aligned_cols=238 Identities=15% Similarity=0.214 Sum_probs=199.1
Q ss_pred CCCCccceeeeecceeeeeecCCChhh----HHHHHHHHHHHhcCCCCCccceEeEEEe----CCceeEEEecCCCCCHH
Q 014484 2 GGRCSKFSICWFHCHLKSSVLESSDLG----ETLNLEEAKAVGNLRSERLANLIGCCYE----ADERLLVAEFMPNETLA 73 (423)
Q Consensus 2 G~~g~v~~~~~~~~~~~~~~~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~~lv~e~~~~~~L~ 73 (423)
|++|.||++.+.+..+++|.+...... .+.+.+|+.+|.+++||||+++++++.+ ....++||||++||+|.
T Consensus 31 g~~~~v~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~ 110 (283)
T PHA02988 31 NDQNSIYKGIFNNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLR 110 (283)
T ss_pred CCceEEEEEEECCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeCCCCcHH
Confidence 899999999999999999988765433 3567799999999999999999999987 34678999999999999
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcC-CCeeeccCCCCCeeecCCCCeEEccccccccCCCC-CccccCcccC
Q 014484 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSK-GRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSYSTNLAFT 151 (423)
Q Consensus 74 ~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~~t~~y~ 151 (423)
+++.. .+.+++.....++.+++.||.|||+. + ++||||||+||+++.++.+||+|||+++..... ....++..|+
T Consensus 111 ~~l~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~~-~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~ 187 (283)
T PHA02988 111 EVLDK--EKDLSFKTKLDMAIDCCKGLYNLYKYTN-KPYKNLTSVSFLVTENYKLKIICHGLEKILSSPPFKNVNFMVYF 187 (283)
T ss_pred HHHhh--CCCCChhHHHHHHHHHHHHHHHHHhcCC-CCCCcCChhhEEECCCCcEEEcccchHhhhccccccccCccccc
Confidence 99964 45789999999999999999999985 7 899999999999999999999999998865433 3456789999
Q ss_pred Ccccccc--CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCc
Q 014484 152 PPEYMRT--GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEA 229 (423)
Q Consensus 152 aPE~~~~--~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 229 (423)
|||.+.+ ..++.++|||||||++|||++|..||........ .............+..+++++.+++.+||+.||
T Consensus 188 aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp 263 (283)
T PHA02988 188 SYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEI----YDLIINKNNSLKLPLDCPLEIKCIVEACTSHDS 263 (283)
T ss_pred CHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHH----HHHHHhcCCCCCCCCcCcHHHHHHHHHHhcCCc
Confidence 9999976 6799999999999999999999999875422211 112222222333455678899999999999999
Q ss_pred CCCCCHHHHHHHHHhhh
Q 014484 230 RERPNAKSLVISLMSLQ 246 (423)
Q Consensus 230 ~~Rps~~~vl~~l~~~~ 246 (423)
++|||+.++++.|..+.
T Consensus 264 ~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 264 IKRPNIKEILYNLSLYK 280 (283)
T ss_pred ccCcCHHHHHHHHHHHH
Confidence 99999999999998764
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-42 Score=315.83 Aligned_cols=241 Identities=15% Similarity=0.200 Sum_probs=195.5
Q ss_pred CCCCCccceeeee--cceeeeeecCCChhh--HHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 1 MGGRCSKFSICWF--HCHLKSSVLESSDLG--ETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 1 ~G~~g~v~~~~~~--~~~~~~~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
+|..+.||++.+. +..|++|++.-++.. .+.+.+|+..++.++||||+.++..|..+..+|+||.||.+||+.+.+
T Consensus 36 ~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpfMa~GS~ldIi 115 (516)
T KOG0582|consen 36 VGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPFMAGGSLLDII 115 (516)
T ss_pred ccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeehhhcCCcHHHHH
Confidence 5777889999874 788888888665543 568899999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC--------CccccCc
Q 014484 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--------KSYSTNL 148 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--------~~~~~t~ 148 (423)
+..-...+++..+..|++++++||.|||.+| .||||||+.||||+.+|.+||+|||.+..+..+ .+..||+
T Consensus 116 k~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G-~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp 194 (516)
T KOG0582|consen 116 KTYYPDGLEEASIATILREVLKALDYLHQNG-HIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTP 194 (516)
T ss_pred HHHccccccHHHHHHHHHHHHHHHHHHHhcC-ceecccccccEEEcCCCcEEEcCceeeeeecccCceeeEeeccccCcc
Confidence 8655566999999999999999999999999 999999999999999999999999976543322 4457899
Q ss_pred ccCCcccccc--CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccc----cCCCChhHHHHHHHHHH
Q 014484 149 AFTPPEYMRT--GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSAL----EGHFSNDEGTELVRLAS 222 (423)
Q Consensus 149 ~y~aPE~~~~--~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~li~ 222 (423)
+|||||++.. ..|+.|+||||||++..||.+|..||..-..-.+--..+....+... ...-....+..++++|.
T Consensus 195 ~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~ 274 (516)
T KOG0582|consen 195 CWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIA 274 (516)
T ss_pred cccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHH
Confidence 9999999653 35999999999999999999999998754211111111111111111 11111235678999999
Q ss_pred HhcccCcCCCCCHHHHHHHH
Q 014484 223 RCLQSEARERPNAKSLVISL 242 (423)
Q Consensus 223 ~cl~~dp~~Rps~~~vl~~l 242 (423)
.||++||.+|||++++++|-
T Consensus 275 ~CL~kDP~kRptAskLlkh~ 294 (516)
T KOG0582|consen 275 LCLVKDPSKRPTASKLLKHA 294 (516)
T ss_pred HHhhcCcccCCCHHHHhccH
Confidence 99999999999999999874
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-42 Score=328.69 Aligned_cols=234 Identities=19% Similarity=0.207 Sum_probs=197.4
Q ss_pred CCCCccceeeee--cceeeeeecCCC----h--hhHHHHHHHHHHHhcCC-CCCccceEeEEEeCCceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS----D--LGETLNLEEAKAVGNLR-SERLANLIGCCYEADERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~----~--~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~~~L 72 (423)
|+||.|+.+... +..+++|+.... . ...+.+.+|+.+++.++ ||||+++++++.....+++||||+.||+|
T Consensus 28 GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~~ivmEy~~gGdL 107 (370)
T KOG0583|consen 28 GSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKIYIVMEYCSGGDL 107 (370)
T ss_pred CCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeEEEEEEecCCccH
Confidence 899999999874 688888866553 1 23445668999999998 99999999999999999999999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCC-CCeEEccccccccCC----CCCccccC
Q 014484 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKD-GNPRLSSFGLMKNSR----DGKSYSTN 147 (423)
Q Consensus 73 ~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~-~~~kl~Dfg~~~~~~----~~~~~~~t 147 (423)
.+++.+ .+++.+..+.++++|+++|++|||++| |+||||||+|||++.+ +++||+|||++.... ...+.+||
T Consensus 108 ~~~i~~--~g~l~E~~ar~~F~Qlisav~y~H~~g-i~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~~~~~l~t~cGs 184 (370)
T KOG0583|consen 108 FDYIVN--KGRLKEDEARKYFRQLISAVAYCHSRG-IVHRDLKPENILLDGNEGNLKLSDFGLSAISPGEDGLLKTFCGS 184 (370)
T ss_pred HHHHHH--cCCCChHHHHHHHHHHHHHHHHHHhCC-EeeCCCCHHHEEecCCCCCEEEeccccccccCCCCCcccCCCCC
Confidence 999965 678999999999999999999999999 9999999999999999 999999999998772 33667899
Q ss_pred cccCCccccccCC-CC-CCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhH-HHHHHHHHHHh
Q 014484 148 LAFTPPEYMRTGR-VT-PESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDE-GTELVRLASRC 224 (423)
Q Consensus 148 ~~y~aPE~~~~~~-~~-~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~li~~c 224 (423)
+.|+|||++.+.. |+ .++||||+|++||-|++|..||.......... .+. .....+|..+ ++++.+++.+|
T Consensus 185 p~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~----ki~--~~~~~~p~~~~S~~~~~Li~~m 258 (370)
T KOG0583|consen 185 PAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYR----KIR--KGEFKIPSYLLSPEARSLIEKM 258 (370)
T ss_pred cccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHH----HHh--cCCccCCCCcCCHHHHHHHHHH
Confidence 9999999999877 75 79999999999999999999998742221111 111 1122345555 88999999999
Q ss_pred cccCcCCCCCHHHHHHHHHh
Q 014484 225 LQSEARERPNAKSLVISLMS 244 (423)
Q Consensus 225 l~~dp~~Rps~~~vl~~l~~ 244 (423)
|..||.+|+|+.+++.|-+-
T Consensus 259 L~~~P~~R~t~~~i~~h~w~ 278 (370)
T KOG0583|consen 259 LVPDPSTRITLLEILEHPWF 278 (370)
T ss_pred cCCCcccCCCHHHHhhChhh
Confidence 99999999999999966443
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-43 Score=328.01 Aligned_cols=233 Identities=16% Similarity=0.178 Sum_probs=201.1
Q ss_pred CCCCccceeeee--cceeeeeecCCChhh---HHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLG---ETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
|+||.||++... ...|++|.+.+.... ...+.+|+++++.++|||||.++++|+...++|+|+||+.| +|..++
T Consensus 13 Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~a~g-~L~~il 91 (808)
T KOG0597|consen 13 GSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEYAVG-DLFTIL 91 (808)
T ss_pred CccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehhhhh-hHHHHH
Confidence 899999999875 566888887665543 44578999999999999999999999999999999999988 999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC----ccccCcccCC
Q 014484 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK----SYSTNLAFTP 152 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~----~~~~t~~y~a 152 (423)
. .++.++++.+..++.+++.||.|||+++ |+|||+||.|||++..|++|+||||+++....+. +..||+.|||
T Consensus 92 ~--~d~~lpEe~v~~~a~~LVsaL~yLhs~r-ilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vltsikGtPlYmA 168 (808)
T KOG0597|consen 92 E--QDGKLPEEQVRAIAYDLVSALYYLHSNR-ILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLTSIKGTPLYMA 168 (808)
T ss_pred H--hccCCCHHHHHHHHHHHHHHHHHHHhcC-cccccCCcceeeecCCCceeechhhhhhhcccCceeeeeccCcccccC
Confidence 6 4678999999999999999999999999 9999999999999999999999999999877653 4579999999
Q ss_pred ccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCC
Q 014484 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (423)
Q Consensus 153 PE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (423)
||...+++|+..+|+||+||++||+++|++||....... -+..+.... ..+|...+.++..|+...|.+||..|
T Consensus 169 PElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~----Lv~~I~~d~--v~~p~~~S~~f~nfl~gLL~kdP~~R 242 (808)
T KOG0597|consen 169 PELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQ----LVKSILKDP--VKPPSTASSSFVNFLQGLLIKDPAQR 242 (808)
T ss_pred HHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHH----HHHHHhcCC--CCCcccccHHHHHHHHHHhhcChhhc
Confidence 999999999999999999999999999999987642221 122222211 23455788999999999999999999
Q ss_pred CCHHHHHHHHHh
Q 014484 233 PNAKSLVISLMS 244 (423)
Q Consensus 233 ps~~~vl~~l~~ 244 (423)
.|..+++.|--.
T Consensus 243 ltW~~Ll~HpF~ 254 (808)
T KOG0597|consen 243 LTWTDLLGHPFW 254 (808)
T ss_pred ccHHHHhcChHH
Confidence 999999988533
|
|
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-42 Score=320.09 Aligned_cols=232 Identities=19% Similarity=0.285 Sum_probs=200.5
Q ss_pred CCCCccceeeeecceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccCCC
Q 014484 2 GGRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWET 81 (423)
Q Consensus 2 G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~ 81 (423)
|+.|.||.+...++.|++|.+. +.-..+|+-|++|+||||+.|.|+|.....+|||||||..|-|.+.++ .+
T Consensus 135 GaQGAVF~Grl~netVAVKKV~------elkETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~VLk--a~ 206 (904)
T KOG4721|consen 135 GAQGAVFLGRLHNETVAVKKVR------ELKETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYEVLK--AG 206 (904)
T ss_pred CcccceeeeeccCceehhHHHh------hhhhhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHHHHHh--cc
Confidence 8899999999999999987532 222357899999999999999999999999999999999999999996 47
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC---CccccCcccCCcccccc
Q 014484 82 QPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTPPEYMRT 158 (423)
Q Consensus 82 ~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~~t~~y~aPE~~~~ 158 (423)
+.+.....+.|..+|+.|+.|||.+. |||||||.-||||+-+..+||+|||-++..... .++.||..|||||+++.
T Consensus 207 ~~itp~llv~Wsk~IA~GM~YLH~hK-IIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkMSFaGTVaWMAPEvIrn 285 (904)
T KOG4721|consen 207 RPITPSLLVDWSKGIAGGMNYLHLHK-IIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKMSFAGTVAWMAPEVIRN 285 (904)
T ss_pred CccCHHHHHHHHHHhhhhhHHHHHhh-HhhhccCCCceEeeccceEEeccccchHhhhhhhhhhhhhhhHhhhCHHHhhc
Confidence 78999999999999999999999999 999999999999999999999999998866554 45789999999999999
Q ss_pred CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHH
Q 014484 159 GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238 (423)
Q Consensus 159 ~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v 238 (423)
.+.+.|.||||||||||||+||..|+..-.. ...+..+-...+.-..|..+|.-+.-|+++||+-.|.+|||+.++
T Consensus 286 ePcsEKVDIwSfGVVLWEmLT~EiPYkdVds----sAIIwGVGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqi 361 (904)
T KOG4721|consen 286 EPCSEKVDIWSFGVVLWEMLTGEIPYKDVDS----SAIIWGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQI 361 (904)
T ss_pred CCcccccceehhHHHHHHHHhcCCCccccch----heeEEeccCCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHH
Confidence 9999999999999999999999988765311 111222223344555677888899999999999999999999999
Q ss_pred HHHHHhhh
Q 014484 239 VISLMSLQ 246 (423)
Q Consensus 239 l~~l~~~~ 246 (423)
+.||+-..
T Consensus 362 l~HldIa~ 369 (904)
T KOG4721|consen 362 LLHLDIAS 369 (904)
T ss_pred HHHHhhcC
Confidence 99987543
|
|
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-44 Score=323.41 Aligned_cols=232 Identities=15% Similarity=0.233 Sum_probs=199.9
Q ss_pred CCCCccceeeee--cceeeeeecCC--ChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLES--SDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~ 77 (423)
|+||.||++.+. ...|++|++.- .+...+++++|+.+|.+++++||.++|+.+..+..++++||||.||++.+.++
T Consensus 24 GsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~~gGsv~~lL~ 103 (467)
T KOG0201|consen 24 GSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYCGGGSVLDLLK 103 (467)
T ss_pred cccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHhcCcchhhhhc
Confidence 899999999984 56677776644 44567899999999999999999999999999999999999999999999995
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccCCc
Q 014484 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPP 153 (423)
Q Consensus 78 ~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~aP 153 (423)
.+..+++..+.-++++++.|+.|||.++ .+|||||+.|||+..+|.+||+|||++...... .++.||+.||||
T Consensus 104 --~~~~~~E~~i~~ilre~l~~l~ylH~~~-kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~tfvGTPfwMAP 180 (467)
T KOG0201|consen 104 --SGNILDEFEIAVILREVLKGLDYLHSEK-KIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRKTFVGTPFWMAP 180 (467)
T ss_pred --cCCCCccceeeeehHHHHHHhhhhhhcc-eecccccccceeEeccCcEEEEecceeeeeechhhccccccccccccch
Confidence 3455589999999999999999999999 999999999999999999999999998765532 567899999999
Q ss_pred cccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCC
Q 014484 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERP 233 (423)
Q Consensus 154 E~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 233 (423)
|++.+..|+.|+||||||++.+||++|.+|+... .. ..+..+++....+.+...+++.+++|+..||.+||+.||
T Consensus 181 EVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~----hP-mrvlflIpk~~PP~L~~~~S~~~kEFV~~CL~k~P~~Rp 255 (467)
T KOG0201|consen 181 EVIKQSGYDTKADIWSLGITAIELAKGEPPHSKL----HP-MRVLFLIPKSAPPRLDGDFSPPFKEFVEACLDKNPEFRP 255 (467)
T ss_pred hhhccccccchhhhhhhhHHHHHHhcCCCCCccc----Cc-ceEEEeccCCCCCccccccCHHHHHHHHHHhhcCcccCc
Confidence 9999889999999999999999999999887653 11 223333444444445556788899999999999999999
Q ss_pred CHHHHHHH
Q 014484 234 NAKSLVIS 241 (423)
Q Consensus 234 s~~~vl~~ 241 (423)
|+.++++|
T Consensus 256 sA~~LLKh 263 (467)
T KOG0201|consen 256 SAKELLKH 263 (467)
T ss_pred CHHHHhhh
Confidence 99999988
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-42 Score=300.56 Aligned_cols=233 Identities=16% Similarity=0.221 Sum_probs=201.7
Q ss_pred CCCCCccceeeee--cceeeeeecCCChh----hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 1 MGGRCSKFSICWF--HCHLKSSVLESSDL----GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 1 ~G~~g~v~~~~~~--~~~~~~~~~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
+|+||.|-..... +..+|.|++++.+. ..+...+|..+|+.+.||+++++++.|.+.+.+|+||||++||.|..
T Consensus 54 tGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvmeyv~GGElFS 133 (355)
T KOG0616|consen 54 TGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVMEYVPGGELFS 133 (355)
T ss_pred cCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEEeccCCccHHH
Confidence 5999999888774 77889999877663 24566789999999999999999999999999999999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-CccccCcccCCc
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSYSTNLAFTPP 153 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~~t~~y~aP 153 (423)
++++ -+++++..+.-++.||+.||+|||+++ |++|||||+|||+|++|.+||+|||+++..... -+.+||+.|+||
T Consensus 134 ~Lrk--~~rF~e~~arFYAAeivlAleylH~~~-iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT~TlCGTPeYLAP 210 (355)
T KOG0616|consen 134 YLRK--SGRFSEPHARFYAAEIVLALEYLHSLD-IIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRTWTLCGTPEYLAP 210 (355)
T ss_pred HHHh--cCCCCchhHHHHHHHHHHHHHHHHhcC-eeeccCChHHeeeccCCcEEEEeccceEEecCcEEEecCCccccCh
Confidence 9964 568999999999999999999999999 999999999999999999999999999987765 457899999999
Q ss_pred cccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCC-
Q 014484 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER- 232 (423)
Q Consensus 154 E~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R- 232 (423)
|+++..+++.++|+|+||+++|||+.|.+||..... .....+++.... .+|.-.++++++|++++|+.|-.+|
T Consensus 211 Eii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~----~~iY~KI~~~~v--~fP~~fs~~~kdLl~~LL~vD~t~R~ 284 (355)
T KOG0616|consen 211 EIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP----IQIYEKILEGKV--KFPSYFSSDAKDLLKKLLQVDLTKRF 284 (355)
T ss_pred HHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh----HHHHHHHHhCcc--cCCcccCHHHHHHHHHHHhhhhHhhh
Confidence 999999999999999999999999999999987633 233334443332 4677788999999999999999999
Q ss_pred ----CCHHHHHHHH
Q 014484 233 ----PNAKSLVISL 242 (423)
Q Consensus 233 ----ps~~~vl~~l 242 (423)
+-..+|..|-
T Consensus 285 gnlknG~~dIk~H~ 298 (355)
T KOG0616|consen 285 GNLKNGVEDIKNHP 298 (355)
T ss_pred cCcCCCccccccCc
Confidence 3445555553
|
|
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-42 Score=324.54 Aligned_cols=242 Identities=21% Similarity=0.334 Sum_probs=192.9
Q ss_pred CCCCCccceeeee-------cceeeeeecCCCh--hhHHHHHHHHHHHhcC-CCCCccceEeEEEeCC-ceeEEEecCCC
Q 014484 1 MGGRCSKFSICWF-------HCHLKSSVLESSD--LGETLNLEEAKAVGNL-RSERLANLIGCCYEAD-ERLLVAEFMPN 69 (423)
Q Consensus 1 ~G~~g~v~~~~~~-------~~~~~~~~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~-~~~lv~e~~~~ 69 (423)
-|+||.||++.+. +..+++|++.... .....+.+|+.++..+ +||||++++++|...+ ..++||||+++
T Consensus 17 ~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~~ 96 (338)
T cd05102 17 HGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGPLMVIVEFCKY 96 (338)
T ss_pred cCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCceEEEEecCCC
Confidence 3999999999763 2457777775432 3356788999999999 8999999999987654 57899999999
Q ss_pred CCHHhhhccCC------------------------------------------------------------CCCCCHHHH
Q 014484 70 ETLAKHLFHWE------------------------------------------------------------TQPMKWAMR 89 (423)
Q Consensus 70 ~~L~~~i~~~~------------------------------------------------------------~~~~~~~~~ 89 (423)
|+|.+++.... ..++++..+
T Consensus 97 g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 176 (338)
T cd05102 97 GNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPLTMEDL 176 (338)
T ss_pred CcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccccccCCCCHHHH
Confidence 99999986421 134788899
Q ss_pred HHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC------CccccCcccCCccccccCCCCC
Q 014484 90 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------KSYSTNLAFTPPEYMRTGRVTP 163 (423)
Q Consensus 90 ~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~------~~~~~t~~y~aPE~~~~~~~~~ 163 (423)
..++.||+.||.|||+++ |+||||||+|||++.++.++|+|||+++..... ....++..|+|||++.+..++.
T Consensus 177 ~~~~~qi~~aL~~LH~~~-ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ 255 (338)
T cd05102 177 ICYSFQVARGMEFLASRK-CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVYTT 255 (338)
T ss_pred HHHHHHHHHHHHHHHHCC-EECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcHHhhcCCCCc
Confidence 999999999999999999 999999999999999999999999999765322 1233467899999999888999
Q ss_pred CcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHH
Q 014484 164 ESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISL 242 (423)
Q Consensus 164 ~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l 242 (423)
++|||||||++|||++ |..||....... .....+........+..+++++.+++.+||+.||.+|||+.++++.|
T Consensus 256 ~sDiwslG~il~el~~~g~~pf~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l 331 (338)
T cd05102 256 QSDVWSFGVLLWEIFSLGASPYPGVQINE----EFCQRLKDGTRMRAPENATPEIYRIMLACWQGDPKERPTFSALVEIL 331 (338)
T ss_pred ccCHHHHHHHHHHHHhCCCCCCCCCCccH----HHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 9999999999999997 888876532111 11111111222233455678899999999999999999999999999
Q ss_pred Hhhhh
Q 014484 243 MSLQK 247 (423)
Q Consensus 243 ~~~~~ 247 (423)
+.+..
T Consensus 332 ~~~~~ 336 (338)
T cd05102 332 GDLLQ 336 (338)
T ss_pred HHHHh
Confidence 88654
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-42 Score=325.49 Aligned_cols=234 Identities=16% Similarity=0.169 Sum_probs=200.9
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+.|.|=.+... |...++|++.+.. .....+.+||.+|+-+.||||+++++++++..++|+|.||++||.|+++
T Consensus 23 Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEyv~gGELFdy 102 (786)
T KOG0588|consen 23 GSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEYVPGGELFDY 102 (786)
T ss_pred CCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEecCCchhHHH
Confidence 677777777663 7778888876652 2245678999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC---CccccCcccCC
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTP 152 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~~t~~y~a 152 (423)
+.+ .+++++.++.++++||+.|+.|||..+ |+||||||+|+|+|.++++||+|||.|..-..+ .+.+|+++|.+
T Consensus 103 lv~--kG~l~e~eaa~ff~QIi~gv~yCH~~~-icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gklLeTSCGSPHYA~ 179 (786)
T KOG0588|consen 103 LVR--KGPLPEREAAHFFRQILDGVSYCHAFN-ICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKLLETSCGSPHYAA 179 (786)
T ss_pred HHh--hCCCCCHHHHHHHHHHHHHHHHHhhhc-ceeccCCchhhhhhcccCEeeeccceeecccCCccccccCCCcccCC
Confidence 964 778999999999999999999999999 999999999999999999999999998765554 46789999999
Q ss_pred ccccccCCC-CCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhcccc--ccCCCChhHHHHHHHHHHHhcccCc
Q 014484 153 PEYMRTGRV-TPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSA--LEGHFSNDEGTELVRLASRCLQSEA 229 (423)
Q Consensus 153 PE~~~~~~~-~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~cl~~dp 229 (423)
||++.|.+| +.++||||.|||||.|+||..||.++. +..++... .....|..+++++++||.+||..||
T Consensus 180 PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdN--------ir~LLlKV~~G~f~MPs~Is~eaQdLLr~ml~VDp 251 (786)
T KOG0588|consen 180 PEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDN--------IRVLLLKVQRGVFEMPSNISSEAQDLLRRMLDVDP 251 (786)
T ss_pred chhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCcc--------HHHHHHHHHcCcccCCCcCCHHHHHHHHHHhccCc
Confidence 999999997 669999999999999999999998652 22222211 2224567789999999999999999
Q ss_pred CCCCCHHHHHHHHHhhh
Q 014484 230 RERPNAKSLVISLMSLQ 246 (423)
Q Consensus 230 ~~Rps~~~vl~~l~~~~ 246 (423)
..|.|.++|++|..-..
T Consensus 252 ~~RiT~~eI~kHP~l~g 268 (786)
T KOG0588|consen 252 STRITTEEILKHPFLSG 268 (786)
T ss_pred cccccHHHHhhCchhhc
Confidence 99999999999976543
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-41 Score=289.74 Aligned_cols=239 Identities=19% Similarity=0.205 Sum_probs=193.9
Q ss_pred CCCCccceeeee--cceeeeeecCCChhh---HHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLG---ETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
|.||.||++... +..|++|.+...+.. .-..++||+.|+.++|+||+.+.++|...+.+.+|+||++. +|+..|
T Consensus 13 G~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEfm~t-dLe~vI 91 (318)
T KOG0659|consen 13 GTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEFMPT-DLEVVI 91 (318)
T ss_pred cceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEeccc-cHHHHh
Confidence 889999999985 777888766544322 44678999999999999999999999999999999999987 999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCCc----cccCcccCC
Q 014484 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS----YSTNLAFTP 152 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~----~~~t~~y~a 152 (423)
++ ....++..++..++.++++|++|||++. |+||||||.|+|++.+|.+||+|||+++...+... .+.|.+|.|
T Consensus 92 kd-~~i~l~pa~iK~y~~m~LkGl~y~H~~~-IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~~~V~TRWYRA 169 (318)
T KOG0659|consen 92 KD-KNIILSPADIKSYMLMTLKGLAYCHSKW-ILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQTHQVVTRWYRA 169 (318)
T ss_pred cc-cccccCHHHHHHHHHHHHHHHHHHHhhh-hhcccCCccceEEcCCCcEEeecccchhccCCCCcccccceeeeeccC
Confidence 75 5678999999999999999999999999 99999999999999999999999999998775422 357899999
Q ss_pred ccccccCC-CCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhh----------------------ccccccCCC
Q 014484 153 PEYMRTGR-VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLL----------------------MDSALEGHF 209 (423)
Q Consensus 153 PE~~~~~~-~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~ 209 (423)
||.+.|.. |+...|+||.||++.||+-|.+.|++...-..-...+..+ .+......+
T Consensus 170 PELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~l 249 (318)
T KOG0659|consen 170 PELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNL 249 (318)
T ss_pred hHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCccccc
Confidence 99888764 9999999999999999999998887653211111111000 000111111
Q ss_pred ChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 210 SNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 210 ~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
-+..+.++.+++.+||..||.+|+|+.++++|-.
T Consensus 250 f~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~y 283 (318)
T KOG0659|consen 250 FPAASSDALDLLSKMLTYNPKKRITASQALKHPY 283 (318)
T ss_pred cccccHHHHHHHHhhhccCchhcccHHHHhcchh
Confidence 2234678899999999999999999999998843
|
|
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-41 Score=316.85 Aligned_cols=233 Identities=17% Similarity=0.157 Sum_probs=196.4
Q ss_pred CCCCccceeeee--cceeeeeecCCChhh----HHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLG----ETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.-. +..+|.|++.++... ......|-.+|...++|+||+++-.|.+.+.+||||||++||++-.+
T Consensus 152 GAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiMEylPGGD~mTL 231 (550)
T KOG0605|consen 152 GAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLIMEYLPGGDMMTL 231 (550)
T ss_pred ccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEEEEecCCccHHHH
Confidence 999999999864 788999999887643 44667899999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCC---------------
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD--------------- 140 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~--------------- 140 (423)
|.+ .+.+++..+..++.+++.||..+|+.| +|||||||+|+|||..|++||+||||+.....
T Consensus 232 L~~--~~~L~e~~arfYiaE~vlAI~~iH~~g-yIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~ 308 (550)
T KOG0605|consen 232 LMR--KDTLTEDWARFYIAETVLAIESIHQLG-YIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIESYRLDEQMQI 308 (550)
T ss_pred HHh--cCcCchHHHHHHHHHHHHHHHHHHHcC-cccccCChhheeecCCCCEeeccccccchhhhhhhhhhhcchhhhhh
Confidence 964 567999999999999999999999999 99999999999999999999999999852110
Q ss_pred ----------C--------------------------CccccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCC
Q 014484 141 ----------G--------------------------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184 (423)
Q Consensus 141 ----------~--------------------------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~ 184 (423)
. .+.+|||.|+|||++.+.+|+..+|+||||||+|||+.|.+||
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF 388 (550)
T KOG0605|consen 309 NLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPPF 388 (550)
T ss_pred hhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHHHHHHhCCCCC
Confidence 0 0235799999999999999999999999999999999999999
Q ss_pred CchhhHHhhhchhhhhccccccCCCC--hhHHHHHHHHHHHhcccCcCCCC---CHHHHHHHH
Q 014484 185 PSHALDLIRSKNFLLLMDSALEGHFS--NDEGTELVRLASRCLQSEARERP---NAKSLVISL 242 (423)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~cl~~dp~~Rp---s~~~vl~~l 242 (423)
.... ......+++.......+| ..++.+..+||.+||. ||.+|. +++||-+|.
T Consensus 389 ~s~t----p~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HP 446 (550)
T KOG0605|consen 389 CSET----PQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHP 446 (550)
T ss_pred CCCC----HHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCC
Confidence 8763 333444444433222333 3457899999999999 999994 688887764
|
|
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-41 Score=319.87 Aligned_cols=232 Identities=19% Similarity=0.218 Sum_probs=194.5
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+... +..+++|++.... .....+.+|+.++..++||||+++++++..++..|+||||++|++|.++
T Consensus 6 G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 85 (323)
T cd05571 6 GTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGELFFH 85 (323)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCCcHHHH
Confidence 899999999874 6778888776432 2345678899999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCC----CCccccCcccC
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNLAFT 151 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~~t~~y~ 151 (423)
+.. .+.+++..+..++.||+.||.|||++| |+||||||+||+++.++.+||+|||+++.... .....||+.|+
T Consensus 86 l~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~-ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~ 162 (323)
T cd05571 86 LSR--ERVFSEDRARFYGAEIVSALGYLHSCD-VVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYL 162 (323)
T ss_pred HHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccceecCcccc
Confidence 854 457899999999999999999999999 99999999999999999999999999875322 23356899999
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCC
Q 014484 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARE 231 (423)
Q Consensus 152 aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (423)
|||++.+..++.++|||||||++|||++|..||.......... .... ....++..+++++.++|.+||..||++
T Consensus 163 aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~----~~~~--~~~~~p~~~~~~~~~li~~~L~~dP~~ 236 (323)
T cd05571 163 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE----LILM--EEIRFPRTLSPEAKSLLAGLLKKDPKQ 236 (323)
T ss_pred ChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHH----HHHc--CCCCCCCCCCHHHHHHHHHHccCCHHH
Confidence 9999998899999999999999999999999886542221111 1111 112345667889999999999999999
Q ss_pred CC-----CHHHHHHHH
Q 014484 232 RP-----NAKSLVISL 242 (423)
Q Consensus 232 Rp-----s~~~vl~~l 242 (423)
|| ++.++++|-
T Consensus 237 R~~~~~~~~~~ll~h~ 252 (323)
T cd05571 237 RLGGGPEDAKEIMEHR 252 (323)
T ss_pred cCCCCCCCHHHHHcCC
Confidence 99 899999874
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-42 Score=335.25 Aligned_cols=243 Identities=23% Similarity=0.330 Sum_probs=210.0
Q ss_pred CCCCCccceeeeec-------ceeeeeecCCCh--hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCC
Q 014484 1 MGGRCSKFSICWFH-------CHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNET 71 (423)
Q Consensus 1 ~G~~g~v~~~~~~~-------~~~~~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 71 (423)
+|.||.||.+...+ .-|++|.++... +.+.+|.+|++++..|+|||||+++|+|..++..|+|+|||..||
T Consensus 496 egaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~MvFEYm~~GD 575 (774)
T KOG1026|consen 496 EGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCMVFEYMDHGD 575 (774)
T ss_pred CchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEEEEEeccccc
Confidence 69999999998753 447777775544 357899999999999999999999999999999999999999999
Q ss_pred HHhhhccC--------CCC----CCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCC
Q 014484 72 LAKHLFHW--------ETQ----PMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSR 139 (423)
Q Consensus 72 L~~~i~~~--------~~~----~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 139 (423)
|.+|++-. .+. +++..+.+.|+.||+.|+.||-++. +|||||-..|+||+++..+||+|||+++..-
T Consensus 576 L~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~-FVHRDLATRNCLVge~l~VKIsDfGLsRdiY 654 (774)
T KOG1026|consen 576 LHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHH-FVHRDLATRNCLVGENLVVKISDFGLSRDIY 654 (774)
T ss_pred HHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCc-ccccchhhhhceeccceEEEecccccchhhh
Confidence 99999732 122 3889999999999999999999999 9999999999999999999999999999776
Q ss_pred CCCcc------ccCcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChh
Q 014484 140 DGKSY------STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 212 (423)
Q Consensus 140 ~~~~~------~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (423)
...-. .-+++|||||.+..++++.+|||||+||+|||+++ |..|+.+ ..++.+.+.+.....-..|..
T Consensus 655 ssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~g-----lSn~EVIe~i~~g~lL~~Pe~ 729 (774)
T KOG1026|consen 655 SSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYG-----LSNQEVIECIRAGQLLSCPEN 729 (774)
T ss_pred hhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccc-----cchHHHHHHHHcCCcccCCCC
Confidence 54332 23689999999999999999999999999999988 5566666 355566666655555677889
Q ss_pred HHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhhhc
Q 014484 213 EGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEA 249 (423)
Q Consensus 213 ~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~~~~~ 249 (423)
+|.++.+|+..||+.+|++|||++||-..|+.+....
T Consensus 730 CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s 766 (774)
T KOG1026|consen 730 CPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQAS 766 (774)
T ss_pred CCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999887663
|
|
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-41 Score=297.96 Aligned_cols=245 Identities=17% Similarity=0.163 Sum_probs=195.8
Q ss_pred CCCCccceeeee--cceeeeeecCCChhh---HHHHHHHHHHHhcCCCCCccceEeEEEeC--CceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLG---ETLNLEEAKAVGNLRSERLANLIGCCYEA--DERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||++.+. +..||.|.+.-++.. .-.-++||.+|.+++|||||.+-.+.... +.+|+|||||+. +|..
T Consensus 87 GtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VMe~~Eh-DLks 165 (419)
T KOG0663|consen 87 GTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVMEYVEH-DLKS 165 (419)
T ss_pred CcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeHHHHHh-hHHH
Confidence 899999999985 667787877655532 11457999999999999999999988754 468999999987 9999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccc
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAF 150 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y 150 (423)
.+.. -.++|...++..++.|+++|++|||.+. |+||||||+|+|++..|.+||+|||+|+..++. ...+.|.+|
T Consensus 166 l~d~-m~q~F~~~evK~L~~QlL~glk~lH~~w-ilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k~~T~lVVTLWY 243 (419)
T KOG0663|consen 166 LMET-MKQPFLPGEVKTLMLQLLRGLKHLHDNW-ILHRDLKTSNLLLSHKGILKIADFGLAREYGSPLKPYTPLVVTLWY 243 (419)
T ss_pred HHHh-ccCCCchHHHHHHHHHHHHHHHHHhhce-eEecccchhheeeccCCcEEecccchhhhhcCCcccCcceEEEeee
Confidence 8854 4578999999999999999999999999 999999999999999999999999999988766 334568999
Q ss_pred CCccccccCC-CCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhc-------------------------ccc
Q 014484 151 TPPEYMRTGR-VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLM-------------------------DSA 204 (423)
Q Consensus 151 ~aPE~~~~~~-~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~-------------------------~~~ 204 (423)
.|||.+.+.+ |+...|+||+|||+.||+++.+.|++.+.-......+..+- ...
T Consensus 244 RaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~ 323 (419)
T KOG0663|consen 244 RAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNN 323 (419)
T ss_pred cCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchh
Confidence 9999998765 99999999999999999999999887632222211111110 011
Q ss_pred ccCCCChh-HHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhhhc
Q 014484 205 LEGHFSND-EGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEA 249 (423)
Q Consensus 205 ~~~~~~~~-~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~~~~~ 249 (423)
++..++.. ++..-.+|+..+|..||.+|.|+++.|.|-.-.....
T Consensus 324 lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P~ 369 (419)
T KOG0663|consen 324 LRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETPL 369 (419)
T ss_pred hhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccCCC
Confidence 11112222 4577899999999999999999999999865544333
|
|
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-42 Score=317.78 Aligned_cols=236 Identities=18% Similarity=0.188 Sum_probs=200.2
Q ss_pred CCCCCccceeeee--cceeeee--ecCCC-hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCc-eeEEEecCCCCCHHh
Q 014484 1 MGGRCSKFSICWF--HCHLKSS--VLESS-DLGETLNLEEAKAVGNLRSERLANLIGCCYEADE-RLLVAEFMPNETLAK 74 (423)
Q Consensus 1 ~G~~g~v~~~~~~--~~~~~~~--~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~lv~e~~~~~~L~~ 74 (423)
.|+||.++..... +..+..| .+... ...+....+|+.+++++.|||||.+.+.|+.++. .+|||+||+||+|.+
T Consensus 14 ~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm~Y~eGg~l~~ 93 (426)
T KOG0589|consen 14 RGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVMEYCEGGDLAQ 93 (426)
T ss_pred ccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEEeecCCCCHHH
Confidence 3899999888764 2223333 33332 2234477899999999999999999999999998 899999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccc
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAF 150 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y 150 (423)
.|.+..+..++++.++.|+.|++.|+.|||++. |+|||||+.||+++.++.++|+|||+++..... .+..||+.|
T Consensus 94 ~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~-iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~a~tvvGTp~Y 172 (426)
T KOG0589|consen 94 LIKEQKGVLFPEERILKWFVQILLAVNYLHENR-VLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSLASTVVGTPYY 172 (426)
T ss_pred HHHHHhhccccHHHHHHHHHHHHHHHHHHHhhh-hhcccchhhhhhccccCceeecchhhhhhcCCchhhhheecCCCcc
Confidence 998777788999999999999999999999998 999999999999999999999999999987765 457899999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcC
Q 014484 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (423)
Q Consensus 151 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (423)
|+||.+.+.+|+.|+|||||||++|||++-+++|........ ...+......+.|..++.++..+|+.||+.+|.
T Consensus 173 mcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~L-----i~ki~~~~~~Plp~~ys~el~~lv~~~l~~~P~ 247 (426)
T KOG0589|consen 173 MCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSEL-----ILKINRGLYSPLPSMYSSELRSLVKSMLRKNPE 247 (426)
T ss_pred cCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHH-----HHHHhhccCCCCCccccHHHHHHHHHHhhcCCc
Confidence 999999999999999999999999999999988876432222 222223334566778899999999999999999
Q ss_pred CCCCHHHHHHHH
Q 014484 231 ERPNAKSLVISL 242 (423)
Q Consensus 231 ~Rps~~~vl~~l 242 (423)
.||++.+++.+.
T Consensus 248 ~RPsa~~LL~~P 259 (426)
T KOG0589|consen 248 HRPSALELLRRP 259 (426)
T ss_pred cCCCHHHHhhCh
Confidence 999999999873
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-41 Score=310.89 Aligned_cols=236 Identities=21% Similarity=0.254 Sum_probs=187.4
Q ss_pred CCCCccceeeee--cceeeeee--cCCChhh-HHHHHHHHHHHhcCCCCCccceEeEEEeC--CceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF--HCHLKSSV--LESSDLG-ETLNLEEAKAVGNLRSERLANLIGCCYEA--DERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~--~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e~~~~~~L~~ 74 (423)
|.||.||++.+. +.-||.|. +...+.+ .....+||.+|++|+||||+++.+..... ..+|||+|||+. +|.-
T Consensus 128 GTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVFeYMdh-DL~G 206 (560)
T KOG0600|consen 128 GTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFEYMDH-DLSG 206 (560)
T ss_pred cchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEEecccc-hhhh
Confidence 889999999985 54455554 4443333 44567999999999999999999999887 679999999987 9999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC-----ccccCcc
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-----SYSTNLA 149 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-----~~~~t~~ 149 (423)
++.. .+-.|++.++..++.||+.||+|||++| |+|||||.+|||||.+|.+||+|||+|+...... ..+.|++
T Consensus 207 Ll~~-p~vkft~~qIKc~mkQLl~Gl~~cH~~g-vlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLW 284 (560)
T KOG0600|consen 207 LLSS-PGVKFTEPQIKCYMKQLLEGLEYCHSRG-VLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSAPYTSRVVTLW 284 (560)
T ss_pred hhcC-CCcccChHHHHHHHHHHHHHHHHHhhcC-eeeccccccceEEcCCCCEEeccccceeeccCCCCcccccceEEee
Confidence 8853 4567999999999999999999999999 9999999999999999999999999999665443 3456899
Q ss_pred cCCccccccCC-CCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccc---------------cccC--CCC-
Q 014484 150 FTPPEYMRTGR-VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS---------------ALEG--HFS- 210 (423)
Q Consensus 150 y~aPE~~~~~~-~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~--~~~- 210 (423)
|.|||.+.|.. |+...|+||.||||.||++|++++++...-..-. .+.++... .+.. .+.
T Consensus 285 YRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~-kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r 363 (560)
T KOG0600|consen 285 YRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLH-KIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKR 363 (560)
T ss_pred ccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHH-HHHHHhCCCChhccccccCCcccccCCCCcccc
Confidence 99999998775 9999999999999999999999887652111110 00110000 0000 011
Q ss_pred ------hhHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014484 211 ------NDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (423)
Q Consensus 211 ------~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~ 241 (423)
...++...+|+..+|..||.+|.|+.+++++
T Consensus 364 ~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~s 400 (560)
T KOG0600|consen 364 RLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQS 400 (560)
T ss_pred hHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcC
Confidence 1246778999999999999999999999876
|
|
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=305.04 Aligned_cols=238 Identities=19% Similarity=0.309 Sum_probs=200.5
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW 79 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~ 79 (423)
|+||.||.+.+. +..+++|.+.........+.+|++++..++||||+++++++..++..++||||+++++|.+++...
T Consensus 17 g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~ 96 (263)
T cd05052 17 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC 96 (263)
T ss_pred cccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCCCCcHHHHHHhC
Confidence 789999999985 677888888776666778999999999999999999999999999999999999999999999654
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCCc-----cccCcccCCcc
Q 014484 80 ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS-----YSTNLAFTPPE 154 (423)
Q Consensus 80 ~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-----~~~t~~y~aPE 154 (423)
....+++..+..++.|++.||.|||+++ ++||||||+||++++++.++|+|||++........ ..++..|+|||
T Consensus 97 ~~~~l~~~~~~~~~~ql~~~l~~lH~~~-i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~y~aPE 175 (263)
T cd05052 97 NRQEVNAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 175 (263)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhCC-EeecccCcceEEEcCCCcEEeCCCccccccccceeeccCCCCCccccCCHH
Confidence 4556899999999999999999999999 99999999999999999999999999876554321 12356799999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCC
Q 014484 155 YMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERP 233 (423)
Q Consensus 155 ~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 233 (423)
.+.+..++.++|||||||++|||++ |..|++..... ..............+..++.++.+++.+||+.||++||
T Consensus 176 ~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp 250 (263)
T cd05052 176 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS-----QVYELLEKGYRMERPEGCPPKVYELMRACWQWNPSDRP 250 (263)
T ss_pred HhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH-----HHHHHHHCCCCCCCCCCCCHHHHHHHHHHccCCcccCC
Confidence 9998889999999999999999998 88777653221 11122222233345566788999999999999999999
Q ss_pred CHHHHHHHHHhh
Q 014484 234 NAKSLVISLMSL 245 (423)
Q Consensus 234 s~~~vl~~l~~~ 245 (423)
|+.++++.|+.+
T Consensus 251 ~~~~l~~~l~~~ 262 (263)
T cd05052 251 SFAEIHQAFETM 262 (263)
T ss_pred CHHHHHHHHHhh
Confidence 999999998764
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-41 Score=311.17 Aligned_cols=239 Identities=18% Similarity=0.230 Sum_probs=195.4
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.+. +..+++|.+.... .....+.+|+.++..++|+||+.+++++.+++..++||||+++|+|..+
T Consensus 11 G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~ 90 (285)
T cd05631 11 GGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTIMNGGDLKFH 90 (285)
T ss_pred CCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEecCCCcHHHH
Confidence 899999999875 6778888765433 2234678999999999999999999999999999999999999999988
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC---CccccCcccCC
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTP 152 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~~t~~y~a 152 (423)
+.......+++..+..++.|++.||.|||+++ |+||||||+|||++.++.++|+|||++...... ....||..|+|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~g~~~y~a 169 (285)
T cd05631 91 IYNMGNPGFDEQRAIFYAAELCCGLEDLQRER-IVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETVRGRVGTVGYMA 169 (285)
T ss_pred HHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCC-EEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCeecCCCCCCCccC
Confidence 86544456999999999999999999999999 999999999999999999999999998865432 23468999999
Q ss_pred ccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCC
Q 014484 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (423)
Q Consensus 153 PE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (423)
||++.+..++.++|||||||++|+|++|..||......... ....... ......++...++++.+|+.+||+.||.+|
T Consensus 170 PE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~-~~~~~~~-~~~~~~~~~~~s~~~~~li~~~l~~~P~~R 247 (285)
T cd05631 170 PEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKR-EEVDRRV-KEDQEEYSEKFSEDAKSICRMLLTKNPKER 247 (285)
T ss_pred HhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhH-HHHHHHh-hcccccCCccCCHHHHHHHHHHhhcCHHHh
Confidence 99999889999999999999999999999988753211110 1111111 111223455677889999999999999999
Q ss_pred CC-----HHHHHHHHH
Q 014484 233 PN-----AKSLVISLM 243 (423)
Q Consensus 233 ps-----~~~vl~~l~ 243 (423)
|+ ++++++|..
T Consensus 248 ~~~~~~~~~~~~~h~~ 263 (285)
T cd05631 248 LGCRGNGAAGVKQHPI 263 (285)
T ss_pred cCCCCCCHHHHhcCHh
Confidence 87 899998753
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-42 Score=329.92 Aligned_cols=292 Identities=18% Similarity=0.232 Sum_probs=239.5
Q ss_pred CCCCccceeeee-----cceeeeeecCCCh--hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF-----HCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~-----~~~~~~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|-||.|+++... ...|++|.++... ..+.+|+.|..+|.+++||||+++.|+........||+|||++|+|+.
T Consensus 640 GEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTEyMENGsLDs 719 (996)
T KOG0196|consen 640 GEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITEYMENGSLDS 719 (996)
T ss_pred ccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhhhhhCCcHHH
Confidence 789999999874 4568888876644 346689999999999999999999999999999999999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCCc----cc-c--C
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS----YS-T--N 147 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~----~~-~--t 147 (423)
|++.+.+ .|++.+.+.+++.|+.|++||-+.+ +|||||-..|||++.+-..|++|||+++...+... .. | +
T Consensus 720 FLR~~DG-qftviQLVgMLrGIAsGMkYLsdm~-YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIP 797 (996)
T KOG0196|consen 720 FLRQNDG-QFTVIQLVGMLRGIASGMKYLSDMN-YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIP 797 (996)
T ss_pred HHhhcCC-ceEeehHHHHHHHHHHHhHHHhhcC-chhhhhhhhheeeccceEEEeccccceeecccCCCccccccCCccc
Confidence 9987654 4999999999999999999999999 99999999999999999999999999997654321 11 1 4
Q ss_pred cccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcc
Q 014484 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (423)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (423)
++|+|||.+...+++.+|||||+|+++||.++ |..|+.. +.++++.+.++...+-+.|.++|..|.+|+..||+
T Consensus 798 iRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWd-----mSNQdVIkaIe~gyRLPpPmDCP~aL~qLMldCWq 872 (996)
T KOG0196|consen 798 IRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWD-----MSNQDVIKAIEQGYRLPPPMDCPAALYQLMLDCWQ 872 (996)
T ss_pred eeecChhHhhhcccCchhhccccceEEEEecccCCCcccc-----cchHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHH
Confidence 78999999999999999999999999999887 5555544 78889999999999989999999999999999999
Q ss_pred cCcCCCCCHHHHHHHHHhhhhhccCChhhhhcCCCCC--C---CCCCCCCCCcccccccccchhHHHHHHhhcCccCCc
Q 014484 227 SEARERPNAKSLVISLMSLQKEAEVPSYVLLGIQHET--A---PSTKPLSLTPLGEACSRLDLTAIHEILEGMGYKDDE 300 (423)
Q Consensus 227 ~dp~~Rps~~~vl~~l~~~~~~~~~~~~~~~~~~~~~--~---~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (423)
+|-.+||.+.+|+.+|.++.+++..-........... . +.+.-....++..|.+.++..+..++|..+|+.+-+
T Consensus 873 kdR~~RP~F~qiV~~lDklIrnP~SLk~~~~~~~r~s~~lld~~~~~~~~f~sv~~WL~aIkm~rY~~~F~~ag~~s~~ 951 (996)
T KOG0196|consen 873 KDRNRRPKFAQIVSTLDKLIRNPNSLKTIAPESPRPSQPLLDRSGSDFTPFRSVGDWLEAIKMGRYKEHFAAAGYTSFE 951 (996)
T ss_pred HHhhcCCCHHHHHHHHHHHhcCchhhcccCCCCCCCcccccCCCCCCCcccCCHHHHHHHhhhhHHHHHHHhcCcccHH
Confidence 9999999999999999999988543222111111110 1 111112234566677777777777777777776554
|
|
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=315.39 Aligned_cols=233 Identities=16% Similarity=0.171 Sum_probs=195.1
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.+. +..+++|++.... .....+.+|+.++..++||||+++++++..++..++||||++|++|.++
T Consensus 29 G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 108 (329)
T PTZ00263 29 GSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLLEFVVGGELFTH 108 (329)
T ss_pred cCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEEcCCCCChHHHH
Confidence 899999999885 5678888775432 2345688999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-CccccCcccCCcc
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSYSTNLAFTPPE 154 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~~t~~y~aPE 154 (423)
+.+ .+.+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....||+.|+|||
T Consensus 109 l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE 185 (329)
T PTZ00263 109 LRK--AGRFPNDVAKFYHAELVLAFEYLHSKD-IIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTFTLCGTPEYLAPE 185 (329)
T ss_pred HHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHEEECCCCCEEEeeccCceEcCCCcceecCChhhcCHH
Confidence 964 457899999999999999999999999 999999999999999999999999999866543 3456899999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCC
Q 014484 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (423)
Q Consensus 155 ~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (423)
++.+..++.++|||||||++|+|++|..||........ ....... ...++..++.++.++|.+||+.||.+||+
T Consensus 186 ~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~----~~~i~~~--~~~~p~~~~~~~~~li~~~L~~dP~~R~~ 259 (329)
T PTZ00263 186 VIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRI----YEKILAG--RLKFPNWFDGRARDLVKGLLQTDHTKRLG 259 (329)
T ss_pred HHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHH----HHHHhcC--CcCCCCCCCHHHHHHHHHHhhcCHHHcCC
Confidence 99988899999999999999999999999865422111 1111111 12344456778999999999999999986
Q ss_pred -----HHHHHHHHH
Q 014484 235 -----AKSLVISLM 243 (423)
Q Consensus 235 -----~~~vl~~l~ 243 (423)
+++++.|..
T Consensus 260 ~~~~~~~~ll~hp~ 273 (329)
T PTZ00263 260 TLKGGVADVKNHPY 273 (329)
T ss_pred CCCCCHHHHhcCCc
Confidence 799998853
|
|
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-40 Score=313.35 Aligned_cols=242 Identities=16% Similarity=0.214 Sum_probs=193.6
Q ss_pred CCCCccceeeee--cceeeeeecCCC--hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~ 77 (423)
|+||.||.+.+. +..+++|++... ......+.+|++++.+++||||+++++++..++..++||||++|++|.+++.
T Consensus 16 G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~ 95 (331)
T cd06649 16 GNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK 95 (331)
T ss_pred CCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeecCCCCcHHHHHH
Confidence 899999999985 566677766543 2335678999999999999999999999999999999999999999999996
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC--CccccCcccCCccc
Q 014484 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTNLAFTPPEY 155 (423)
Q Consensus 78 ~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--~~~~~t~~y~aPE~ 155 (423)
. ...+++..+..++.|++.||.|||+++.|+||||||+||+++.++.++|+|||++...... ....++..|+|||+
T Consensus 96 ~--~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~g~~~y~aPE~ 173 (331)
T cd06649 96 E--AKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPER 173 (331)
T ss_pred H--cCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCcccccccccccccCCCCcCcCCHhH
Confidence 4 4568999999999999999999998633999999999999999999999999998765433 34568999999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchh--------------------------------------
Q 014484 156 MRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNF-------------------------------------- 197 (423)
Q Consensus 156 ~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~-------------------------------------- 197 (423)
+.+..++.++|||||||++|+|++|..||.............
T Consensus 174 ~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (331)
T cd06649 174 LQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAI 253 (331)
T ss_pred hcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccccccccccccccccccchhH
Confidence 998889999999999999999999999886432111100000
Q ss_pred ----hhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhh
Q 014484 198 ----LLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 245 (423)
Q Consensus 198 ----~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~ 245 (423)
..+.............++++.+||.+||++||++|||++++++|..-.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~ 305 (331)
T cd06649 254 FELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIK 305 (331)
T ss_pred HHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHh
Confidence 000000000111123577899999999999999999999999997543
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-41 Score=313.28 Aligned_cols=234 Identities=18% Similarity=0.180 Sum_probs=196.2
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.+. +..+++|++.... .....+.+|+.+++.++||||+++++++.+++..++||||+++++|.++
T Consensus 12 G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 91 (291)
T cd05612 12 GTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLMEYVPGGELFSY 91 (291)
T ss_pred CCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEeCCCCCCHHHH
Confidence 899999999985 6778888775432 2345678999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-CccccCcccCCcc
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSYSTNLAFTPPE 154 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~~t~~y~aPE 154 (423)
+.. .+.+++..+..++.|++.||.|||+++ ++||||||+|||++.+|.++|+|||+++..... ....||+.|+|||
T Consensus 92 ~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE 168 (291)
T cd05612 92 LRN--SGRFSNSTGLFYASEIVCALEYLHSKE-IVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTWTLCGTPEYLAPE 168 (291)
T ss_pred HHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHeEECCCCCEEEEecCcchhccCCcccccCChhhcCHH
Confidence 964 457899999999999999999999999 999999999999999999999999998866543 3456899999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCC
Q 014484 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (423)
Q Consensus 155 ~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (423)
++.+..++.++|||||||++|+|++|..||........ ....... ...++...++.+.++|.+||+.||.+||+
T Consensus 169 ~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~----~~~i~~~--~~~~~~~~~~~~~~li~~~l~~dp~~R~~ 242 (291)
T cd05612 169 VIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGI----YEKILAG--KLEFPRHLDLYAKDLIKKLLVVDRTRRLG 242 (291)
T ss_pred HHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHhC--CcCCCccCCHHHHHHHHHHcCCCHHHccC
Confidence 99988899999999999999999999998876422111 1111111 12345556788999999999999999995
Q ss_pred -----HHHHHHHHHh
Q 014484 235 -----AKSLVISLMS 244 (423)
Q Consensus 235 -----~~~vl~~l~~ 244 (423)
+++++.|.+-
T Consensus 243 ~~~~~~~~~l~h~~~ 257 (291)
T cd05612 243 NMKNGADDVKNHRWF 257 (291)
T ss_pred CccCCHHHHhcCccc
Confidence 9999988543
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-41 Score=313.91 Aligned_cols=232 Identities=17% Similarity=0.192 Sum_probs=193.0
Q ss_pred CCCCccceeeee--cceeeeeecCCC----hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS----DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||++.+. +..+++|++... ......+.+|+.++.+++||||+++++++...+..++||||++||+|.++
T Consensus 4 G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~ 83 (312)
T cd05585 4 GSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGELFHH 83 (312)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcHHHH
Confidence 899999999885 566788876542 23455678899999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccC
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFT 151 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~ 151 (423)
+.. .+.+++..+..++.|++.||.|||+++ |+||||||+||+++.++.++|+|||+++..... ....||+.|+
T Consensus 84 l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~ 160 (312)
T cd05585 84 LQR--EGRFDLSRARFYTAELLCALENLHKFN-VIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTPEYL 160 (312)
T ss_pred HHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccCCcccC
Confidence 864 456999999999999999999999999 999999999999999999999999998754322 2346899999
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCC
Q 014484 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARE 231 (423)
Q Consensus 152 aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (423)
|||++.+..++.++|||||||++|+|++|..||........ ....... ...++...++++.+++.+||+.||.+
T Consensus 161 aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~----~~~~~~~--~~~~~~~~~~~~~~li~~~L~~dp~~ 234 (312)
T cd05585 161 APELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEM----YRKILQE--PLRFPDGFDRDAKDLLIGLLSRDPTR 234 (312)
T ss_pred CHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHH----HHHHHcC--CCCCCCcCCHHHHHHHHHHcCCCHHH
Confidence 99999988899999999999999999999999875422211 1111111 22345567788999999999999999
Q ss_pred CC---CHHHHHHHH
Q 014484 232 RP---NAKSLVISL 242 (423)
Q Consensus 232 Rp---s~~~vl~~l 242 (423)
|| ++.+++.|.
T Consensus 235 R~~~~~~~e~l~hp 248 (312)
T cd05585 235 RLGYNGAQEIKNHP 248 (312)
T ss_pred cCCCCCHHHHHcCC
Confidence 97 568888774
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-40 Score=303.67 Aligned_cols=237 Identities=19% Similarity=0.246 Sum_probs=192.7
Q ss_pred CCCCccceeeee-----cceeeeeecCCCh--hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF-----HCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~-----~~~~~~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||++++. +..+++|.+.... .....+.+|+.++.+++||||+++++++..++..++||||+++|+|.+
T Consensus 16 G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~ 95 (266)
T cd05064 16 GRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVTEYMSNGALDS 95 (266)
T ss_pred cCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEEEEeCCCCcHHH
Confidence 899999999864 3456777665442 335678899999999999999999999999999999999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC-----ccccCcc
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-----SYSTNLA 149 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-----~~~~t~~ 149 (423)
++... ...+++..++.++.|++.||.|||+++ ++||||||+||+++.++.++++|||.+....... ...++..
T Consensus 96 ~l~~~-~~~l~~~~~~~~~~~i~~al~~lH~~~-iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~ 173 (266)
T cd05064 96 FLRKH-EGQLVAGQLMGMLPGLASGMKYLSEMG-YVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYTTMSGKSPVL 173 (266)
T ss_pred HHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCC-EeeccccHhhEEEcCCCcEEECCCcccccccccchhcccCCCCcee
Confidence 98642 346899999999999999999999999 9999999999999999999999999876543221 1234578
Q ss_pred cCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccC
Q 014484 150 FTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSE 228 (423)
Q Consensus 150 y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 228 (423)
|+|||.+.+..++.++|||||||++||+++ |..||...... .....+........+..++..+.+++.+||+.+
T Consensus 174 y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~ 248 (266)
T cd05064 174 WAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ-----DVIKAVEDGFRLPAPRNCPNLLHQLMLDCWQKE 248 (266)
T ss_pred ecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH-----HHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCC
Confidence 999999998899999999999999999775 88777653211 111112222222345567788999999999999
Q ss_pred cCCCCCHHHHHHHHHhh
Q 014484 229 ARERPNAKSLVISLMSL 245 (423)
Q Consensus 229 p~~Rps~~~vl~~l~~~ 245 (423)
|.+|||++++++.|..+
T Consensus 249 p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 249 RGERPRFSQIHSILSKM 265 (266)
T ss_pred chhCCCHHHHHHHHHhh
Confidence 99999999999988654
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=320.22 Aligned_cols=241 Identities=20% Similarity=0.309 Sum_probs=194.2
Q ss_pred CCCCCccceeeeec-------ceeeeeecCCCh--hhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCC
Q 014484 1 MGGRCSKFSICWFH-------CHLKSSVLESSD--LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNE 70 (423)
Q Consensus 1 ~G~~g~v~~~~~~~-------~~~~~~~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~ 70 (423)
.|+||.||.+.+.. ..+++|.+.... .....+.+|+++++.+ +|+||++++++|...+..++||||+++|
T Consensus 48 ~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~~lv~ey~~~g 127 (374)
T cd05106 48 AGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPVLVITEYCCYG 127 (374)
T ss_pred CCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCeEEeHhhccCC
Confidence 38999999988642 357888775433 2355788999999999 8999999999999999999999999999
Q ss_pred CHHhhhccCC--------------------------------------------------------------------CC
Q 014484 71 TLAKHLFHWE--------------------------------------------------------------------TQ 82 (423)
Q Consensus 71 ~L~~~i~~~~--------------------------------------------------------------------~~ 82 (423)
+|.+++.... ..
T Consensus 128 ~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (374)
T cd05106 128 DLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKDEEDTEDSW 207 (374)
T ss_pred cHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccccccchhccCCCC
Confidence 9999885321 12
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC------ccccCcccCCcccc
Q 014484 83 PMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK------SYSTNLAFTPPEYM 156 (423)
Q Consensus 83 ~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~------~~~~t~~y~aPE~~ 156 (423)
++++..+++++.||+.||.|||+++ ++||||||+||++++++.++|+|||+++...... ...++..|+|||++
T Consensus 208 ~l~~~~~~~i~~qi~~aL~yLH~~g-iiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~ 286 (374)
T cd05106 208 PLDLDDLLRFSSQVAQGMDFLASKN-CIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESI 286 (374)
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHCC-EEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCccceeCHHHh
Confidence 4788999999999999999999999 9999999999999999999999999987654322 12245679999999
Q ss_pred ccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCCH
Q 014484 157 RTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNA 235 (423)
Q Consensus 157 ~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~ 235 (423)
.+..++.++|||||||++|+|++ |..||..... ................+...++++.+++.+||+.||.+|||+
T Consensus 287 ~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~ 362 (374)
T cd05106 287 FDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILV----NSKFYKMVKRGYQMSRPDFAPPEIYSIMKMCWNLEPTERPTF 362 (374)
T ss_pred cCCCCCccccHHHHHHHHHHHHhCCCCCCccccc----cHHHHHHHHcccCccCCCCCCHHHHHHHHHHcCCChhhCcCH
Confidence 88889999999999999999997 8888765321 111222222222223344457889999999999999999999
Q ss_pred HHHHHHHHhhh
Q 014484 236 KSLVISLMSLQ 246 (423)
Q Consensus 236 ~~vl~~l~~~~ 246 (423)
.++++.|+.+.
T Consensus 363 ~~l~~~l~~~~ 373 (374)
T cd05106 363 SQISQLIQRQL 373 (374)
T ss_pred HHHHHHHHHHh
Confidence 99999998753
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-40 Score=319.49 Aligned_cols=239 Identities=20% Similarity=0.310 Sum_probs=191.6
Q ss_pred CCCCCccceeeee-------cceeeeeecCCCh--hhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCC
Q 014484 1 MGGRCSKFSICWF-------HCHLKSSVLESSD--LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNE 70 (423)
Q Consensus 1 ~G~~g~v~~~~~~-------~~~~~~~~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~ 70 (423)
.|+||.||++.+. +..+++|++.... ...+.+.+|+.++..+ +||||++++++|..++..++||||++||
T Consensus 45 ~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~~g 124 (375)
T cd05104 45 AGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPTLVITEYCCYG 124 (375)
T ss_pred CCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcceeeehhccCC
Confidence 3899999999764 3357778775433 3356788999999999 8999999999999999999999999999
Q ss_pred CHHhhhccCC----------------------------------------------------------------------
Q 014484 71 TLAKHLFHWE---------------------------------------------------------------------- 80 (423)
Q Consensus 71 ~L~~~i~~~~---------------------------------------------------------------------- 80 (423)
+|.+++....
T Consensus 125 ~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (375)
T cd05104 125 DLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQDVTSEIL 204 (375)
T ss_pred cHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccceecccccHHHHH
Confidence 9999885321
Q ss_pred ---CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCCc------cccCcccC
Q 014484 81 ---TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS------YSTNLAFT 151 (423)
Q Consensus 81 ---~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~------~~~t~~y~ 151 (423)
...+++..+..++.||+.||.|||+++ ++||||||+|||++.++.++|+|||+++....... ..++..|+
T Consensus 205 ~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~ 283 (375)
T cd05104 205 EEDELALDTEDLLSFSYQVAKGMSFLASKN-CIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGNARLPVKWM 283 (375)
T ss_pred hccCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCchhhEEEECCCcEEEecCccceeccCcccccccCCCCCCccee
Confidence 124788899999999999999999999 99999999999999999999999999876543321 23456799
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcC
Q 014484 152 PPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (423)
Q Consensus 152 aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (423)
|||.+.+..++.++|||||||++|||++ |..||...... ......+........+...+.++.+++.+||+.||+
T Consensus 284 aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~ 359 (375)
T cd05104 284 APESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVD----SKFYKMIKEGYRMLSPECAPSEMYDIMKSCWDADPL 359 (375)
T ss_pred ChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCch----HHHHHHHHhCccCCCCCCCCHHHHHHHHHHccCChh
Confidence 9999998899999999999999999998 77666543111 111222222222223334567899999999999999
Q ss_pred CCCCHHHHHHHHHh
Q 014484 231 ERPNAKSLVISLMS 244 (423)
Q Consensus 231 ~Rps~~~vl~~l~~ 244 (423)
+|||+.++++.|++
T Consensus 360 ~RPs~~eil~~l~~ 373 (375)
T cd05104 360 KRPTFKQIVQLIEQ 373 (375)
T ss_pred HCcCHHHHHHHHHh
Confidence 99999999999875
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-40 Score=314.49 Aligned_cols=232 Identities=18% Similarity=0.220 Sum_probs=194.1
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+... +..+++|++.... .....+.+|+++++.++||||+++++++..++..++||||+++|+|..+
T Consensus 6 G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~ 85 (328)
T cd05593 6 GTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGELFFH 85 (328)
T ss_pred CCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCCCHHHH
Confidence 899999999874 6778888775432 3345778999999999999999999999999999999999999999998
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccC
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFT 151 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~ 151 (423)
+.. .+.+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....||+.|+
T Consensus 86 l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~ 162 (328)
T cd05593 86 LSR--ERVFSEDRTRFYGAEIVSALDYLHSGK-IVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGTPEYL 162 (328)
T ss_pred HHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccccCCcCcc
Confidence 853 457999999999999999999999999 999999999999999999999999998753321 2346899999
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCC
Q 014484 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARE 231 (423)
Q Consensus 152 aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (423)
|||.+.+..++.++|||||||++|+|++|..||......... ..... ....++..+++++.++|.+||+.||++
T Consensus 163 aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~----~~~~~--~~~~~p~~~~~~~~~li~~~L~~dP~~ 236 (328)
T cd05593 163 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF----ELILM--EDIKFPRTLSADAKSLLSGLLIKDPNK 236 (328)
T ss_pred ChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHH----HHhcc--CCccCCCCCCHHHHHHHHHHcCCCHHH
Confidence 999999888999999999999999999999988654222111 11111 112345567888999999999999999
Q ss_pred CC-----CHHHHHHHH
Q 014484 232 RP-----NAKSLVISL 242 (423)
Q Consensus 232 Rp-----s~~~vl~~l 242 (423)
|| ++.++++|.
T Consensus 237 R~~~~~~~~~~il~h~ 252 (328)
T cd05593 237 RLGGGPDDAKEIMRHS 252 (328)
T ss_pred cCCCCCCCHHHHhcCC
Confidence 97 899999874
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=332.47 Aligned_cols=414 Identities=16% Similarity=0.106 Sum_probs=273.5
Q ss_pred CCCCccceeeee--cceeeeeecCCC----hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS----DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
||||.||++.+. +..+++|++... ......+.+|++++..++||||+++++++.+++..++||||++|++|.++
T Consensus 13 GgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVMEY~eGGSL~~l 92 (932)
T PRK13184 13 GGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTMPYIEGYTLKSL 92 (932)
T ss_pred CCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEEEcCCCCCHHHH
Confidence 899999999874 677888877543 23356789999999999999999999999999999999999999999998
Q ss_pred hccC---------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCC------
Q 014484 76 LFHW---------ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD------ 140 (423)
Q Consensus 76 i~~~---------~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~------ 140 (423)
+... ....+++..++.++.||+.||.|||+++ |+||||||+||+++.++.++|+|||+++....
T Consensus 93 L~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G-IIHRDLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~~ 171 (932)
T PRK13184 93 LKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKG-VLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLL 171 (932)
T ss_pred HHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCC-ccccCCchheEEEcCCCCEEEEecCcceeccccccccc
Confidence 8531 1234567788999999999999999999 99999999999999999999999999875511
Q ss_pred ----------------CCccccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhcccc
Q 014484 141 ----------------GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSA 204 (423)
Q Consensus 141 ----------------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~ 204 (423)
.....||+.|+|||.+.+..++.++|||||||++|||+||..||........... ......
T Consensus 172 ~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~~~---~~i~~P 248 (932)
T PRK13184 172 DIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKISYR---DVILSP 248 (932)
T ss_pred ccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhhhh---hhccCh
Confidence 0123589999999999988999999999999999999999988865321111100 111111
Q ss_pred ccCCCChhHHHHHHHHHHHhcccCcCCCC-CHHHHHHHHHhhhhhccC--Chh-----h----------h--hcCC--CC
Q 014484 205 LEGHFSNDEGTELVRLASRCLQSEARERP-NAKSLVISLMSLQKEAEV--PSY-----V----------L--LGIQ--HE 262 (423)
Q Consensus 205 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rp-s~~~vl~~l~~~~~~~~~--~~~-----~----------~--~~~~--~~ 262 (423)
........+++.+.+++.+||+.||++|| +++++++.|.......+. +.. . . ...+ ..
T Consensus 249 ~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~~p~w~~~~~l~~~~~~~wk~~e~iLlsk~~~~l~~ 328 (932)
T PRK13184 249 IEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQGSPEWTVKATLMTKKKSCWKFYEPILLSKYFPMLES 328 (932)
T ss_pred hhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcCcccccccccccccchhccccchhhhhhhcccccC
Confidence 00011124567899999999999999995 667777777665432110 000 0 0 0000 00
Q ss_pred CCC---------------------------------CCCCCCCC-------ccccccccc-c---hhHHHHHHhh-----
Q 014484 263 TAP---------------------------------STKPLSLT-------PLGEACSRL-D---LTAIHEILEG----- 293 (423)
Q Consensus 263 ~~~---------------------------------~~~p~~~~-------~~~~~~~~~-~---~~~~~~~~~~----- 293 (423)
.+. ..+|.... +-..|.... + ..-++...+.
T Consensus 329 s~~~w~s~~is~ie~~~~~rie~~~~~~~~~~~~g~~l~p~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (932)
T PRK13184 329 SPAQWYSLMISKIESSSETRLEYTVTKKGLHEGFGILLPPSEEAERGDFYCGYGLWLHIKNNELSVSLVKNGLEIQKKSQ 408 (932)
T ss_pred CchhheeccccccccccceeeeeeeccCccccccceecCcccccccCccccccceeeecccccceeeeecccceeecCCc
Confidence 000 00000000 000000000 0 0000000000
Q ss_pred ----------cCcc----------CCc------------chhhhhhhhhhhhhHH----------HHHHHHHHHHHHHhc
Q 014484 294 ----------MGYK----------DDE------------GIANELSFQMWTSQMQ----------ETLNSKKHGDTAFRA 331 (423)
Q Consensus 294 ----------~~~~----------~~~------------~~~~~~~~~~~~~~~~----------~~~~~~~~g~~~~~~ 331 (423)
..++ ++. +.-..+-.+...-.++ -......-.++.+.-
T Consensus 409 ~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 488 (932)
T PRK13184 409 EIISQQETFAIAIEKSNHRISLFVDQTLWIIHIDYLPSRGGRIGIIIQDLQDIMSNIAIFESSGALRVSCLAVPDAFLAE 488 (932)
T ss_pred ccccccceeeEEEEEecchhhhhcccceEEEeeeccccCCceEEEEEecchhhccceEEEEecCceeeecccCcHHHHhh
Confidence 0000 000 0000000011111111 111444556778888
Q ss_pred CCHHHHHHHHHHHhcCCCC--CcHHHHhhHHHHHHhc----C---ChHHHHHHHHHhHhcCCCchHHHHHHHHHHHhCCC
Q 014484 332 KDFSTAIDCYTQFIDGGTM--VSPTVYARRCLSYLMN----D---MPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGM 402 (423)
Q Consensus 332 ~~~~~A~~~~~~ai~~~p~--~~~~~~~~~~~~~~~~----~---~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~ 402 (423)
+.|+.|+..|.+.-.-.|. ...++.+..|.+.+.. | .+++|+..|++.- -.|.-|--|..+|.+|..+|+
T Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 567 (932)
T PRK13184 489 KLYDQALIFYRRIRESFPGRKEGYEAQFRLGITLLEKASEQGDPRDFTQALSEFSYLH-GGVGAPLEYLGKALVYQRLGE 567 (932)
T ss_pred HHHHHHHHHHHHHhhcCCCcccchHHHHHhhHHHHHHHHhcCChHHHHHHHHHHHHhc-CCCCCchHHHhHHHHHHHhhh
Confidence 9999999999999988885 2467888889888764 2 3555666555432 246677789999999999999
Q ss_pred hHHHHHHHHHhhcccccc
Q 014484 403 ENDARETLKDGTNLEAKK 420 (423)
Q Consensus 403 ~~~A~~~~~~al~l~~~~ 420 (423)
|+|-+++|.-|++.-|.+
T Consensus 568 ~~~~~~~~~~~~~~~~~~ 585 (932)
T PRK13184 568 YNEEIKSLLLALKRYSQH 585 (932)
T ss_pred HHHHHHHHHHHHHhcCCC
Confidence 999999999999876653
|
|
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-40 Score=305.04 Aligned_cols=237 Identities=20% Similarity=0.286 Sum_probs=194.4
Q ss_pred CCCCccceeeeec-------ceeeeeecCCCh--hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICWFH-------CHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~~~-------~~~~~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 72 (423)
|+||.||.+.+.+ ..+++|.+.... .....+.+|+.++..++||||+++++++......+++|||+++++|
T Consensus 16 G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L 95 (283)
T cd05048 16 GAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCMLFEYLAHGDL 95 (283)
T ss_pred ccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEEEEecCCCCcH
Confidence 8999999998753 346666664332 3356788999999999999999999999999999999999999999
Q ss_pred HhhhccCCC--------------CCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccC
Q 014484 73 AKHLFHWET--------------QPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNS 138 (423)
Q Consensus 73 ~~~i~~~~~--------------~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 138 (423)
.+++..... ..+++..+..++.|++.||.|||+++ ++||||||+||++++++.++|+|||+++..
T Consensus 96 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~-i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~ 174 (283)
T cd05048 96 HEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH-FVHRDLAARNCLVGEGLTVKISDFGLSRDI 174 (283)
T ss_pred HHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccccccceEEEcCCCcEEECCCcceeec
Confidence 999864311 45889999999999999999999999 999999999999999999999999998765
Q ss_pred CCC------CccccCcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCCh
Q 014484 139 RDG------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSN 211 (423)
Q Consensus 139 ~~~------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (423)
... ....+++.|+|||.+.+..++.++|||||||++|||++ |..||...... .....+........+.
T Consensus 175 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~-----~~~~~i~~~~~~~~~~ 249 (283)
T cd05048 175 YSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ-----EVIEMIRSRQLLPCPE 249 (283)
T ss_pred cccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHH-----HHHHHHHcCCcCCCcc
Confidence 332 22345778999999988889999999999999999998 88887653221 1222222222333456
Q ss_pred hHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHh
Q 014484 212 DEGTELVRLASRCLQSEARERPNAKSLVISLMS 244 (423)
Q Consensus 212 ~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~ 244 (423)
.++.++.+++.+||+.||.+||++.+|+++|..
T Consensus 250 ~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 250 DCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred cCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 678899999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-40 Score=315.38 Aligned_cols=233 Identities=17% Similarity=0.183 Sum_probs=194.1
Q ss_pred CCCCccceeeeec---ceeeeeecCCCh----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWFH---CHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~~---~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||.+.+.+ ..+++|++.... .....+.+|+.++..++||||+++++++.+++..++||||++||+|.+
T Consensus 41 G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~Ey~~~g~L~~ 120 (340)
T PTZ00426 41 GSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLVLEFVIGGEFFT 120 (340)
T ss_pred cCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEEEeCCCCCcHHH
Confidence 8999999998753 357777764432 234567899999999999999999999999999999999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-CccccCcccCCc
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSYSTNLAFTPP 153 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~~t~~y~aP 153 (423)
++.+ .+.+++..+..++.|++.||.|||+++ |+||||||+|||++.++.++|+|||+++..... ....||+.|+||
T Consensus 121 ~i~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~~~~~~gt~~y~aP 197 (340)
T PTZ00426 121 FLRR--NKRFPNDVGCFYAAQIVLIFEYLQSLN-IVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTRTYTLCGTPEYIAP 197 (340)
T ss_pred HHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEccCCCHHHEEECCCCCEEEecCCCCeecCCCcceecCChhhcCH
Confidence 9964 457999999999999999999999999 999999999999999999999999999866533 345789999999
Q ss_pred cccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCC
Q 014484 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERP 233 (423)
Q Consensus 154 E~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 233 (423)
|++.+..++.++|||||||++|||++|..||........ ....... ...++...++++.+++++||+.||.+|+
T Consensus 198 E~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~----~~~i~~~--~~~~p~~~~~~~~~li~~~l~~dp~~R~ 271 (340)
T PTZ00426 198 EILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLI----YQKILEG--IIYFPKFLDNNCKHLMKKLLSHDLTKRY 271 (340)
T ss_pred HHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHH----HHHHhcC--CCCCCCCCCHHHHHHHHHHcccCHHHcC
Confidence 999988899999999999999999999998876422211 1111111 1234555677899999999999999995
Q ss_pred -----CHHHHHHHHH
Q 014484 234 -----NAKSLVISLM 243 (423)
Q Consensus 234 -----s~~~vl~~l~ 243 (423)
+++++++|..
T Consensus 272 ~~~~~~~~~~~~hp~ 286 (340)
T PTZ00426 272 GNLKKGAQNVKEHPW 286 (340)
T ss_pred CCCCCCHHHHHcCCC
Confidence 8999998843
|
|
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-40 Score=297.79 Aligned_cols=233 Identities=14% Similarity=0.177 Sum_probs=197.6
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|.||.|-++..+ ++.|++|.+.+++ ++.-.+.+||++|+.|+||||+.++++|++.+.+.+||||..+|.|.+|
T Consensus 64 GTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivMEYaS~GeLYDY 143 (668)
T KOG0611|consen 64 GTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVMEYASGGELYDY 143 (668)
T ss_pred CcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEEecCCccHHHH
Confidence 778888888764 7888888775544 3444678999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC---CccccCcccCC
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTP 152 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~~t~~y~a 152 (423)
|.+ .+.+++.++..+++||.+|+.|||.++ ++|||||.+|||+|+++++||+|||++-..... .+++|++.|.+
T Consensus 144 iSe--r~~LsErEaRhfFRQIvSAVhYCHknr-VvHRDLKLENILLD~N~NiKIADFGLSNly~~~kfLqTFCGSPLYAS 220 (668)
T KOG0611|consen 144 ISE--RGSLSEREARHFFRQIVSAVHYCHKNR-VVHRDLKLENILLDQNNNIKIADFGLSNLYADKKFLQTFCGSPLYAS 220 (668)
T ss_pred HHH--hccccHHHHHHHHHHHHHHHHHHhhcc-ceecccchhheeecCCCCeeeeccchhhhhccccHHHHhcCCcccCC
Confidence 964 667999999999999999999999999 999999999999999999999999998776654 57899999999
Q ss_pred ccccccCCC-CCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCC
Q 014484 153 PEYMRTGRV-TPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARE 231 (423)
Q Consensus 153 PE~~~~~~~-~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (423)
||++.|.+| ++..|.||||++||-|+.|..||.+.-... .+.++....... +.-|.+..-+|++||-.+|.+
T Consensus 221 PEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~----lvrQIs~GaYrE---P~~PSdA~gLIRwmLmVNP~R 293 (668)
T KOG0611|consen 221 PEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKR----LVRQISRGAYRE---PETPSDASGLIRWMLMVNPER 293 (668)
T ss_pred ccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHH----HHHHhhcccccC---CCCCchHHHHHHHHHhcCccc
Confidence 999999987 679999999999999999999998752221 122222222221 223567899999999999999
Q ss_pred CCCHHHHHHHHHh
Q 014484 232 RPNAKSLVISLMS 244 (423)
Q Consensus 232 Rps~~~vl~~l~~ 244 (423)
|.|+++|..|-+-
T Consensus 294 RATieDiAsHWWv 306 (668)
T KOG0611|consen 294 RATIEDIASHWWV 306 (668)
T ss_pred chhHHHHhhhhee
Confidence 9999999988543
|
|
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=313.26 Aligned_cols=232 Identities=18% Similarity=0.236 Sum_probs=193.0
Q ss_pred CCCCccceeeee--cceeeeeecCCC----hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS----DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+... +..+++|++... ......+.+|++++..++||||+++++++..++..|+||||++|++|..+
T Consensus 6 G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~ 85 (323)
T cd05595 6 GTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFH 85 (323)
T ss_pred CCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCCcHHHH
Confidence 899999998874 667788877543 22345677899999999999999999999999999999999999999998
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccC
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFT 151 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~ 151 (423)
+.+ ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.++|+|||+++..... ....||+.|+
T Consensus 86 l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~ 162 (323)
T cd05595 86 LSR--ERVFTEERARFYGAEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYL 162 (323)
T ss_pred HHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccccCCcCcC
Confidence 854 457899999999999999999999999 999999999999999999999999998753322 2356899999
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCC
Q 014484 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARE 231 (423)
Q Consensus 152 aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (423)
|||++.+..++.++|||||||++|+|++|..||......... ...... ...++..+++++.++|.+||..||.+
T Consensus 163 aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~----~~~~~~--~~~~p~~~~~~~~~li~~~L~~dP~~ 236 (323)
T cd05595 163 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF----ELILME--EIRFPRTLSPEAKSLLAGLLKKDPKQ 236 (323)
T ss_pred CcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHH----HHHhcC--CCCCCCCCCHHHHHHHHHHccCCHHH
Confidence 999999889999999999999999999999888654222111 111111 12345567788999999999999999
Q ss_pred CC-----CHHHHHHHH
Q 014484 232 RP-----NAKSLVISL 242 (423)
Q Consensus 232 Rp-----s~~~vl~~l 242 (423)
|| ++.++++|-
T Consensus 237 R~~~~~~~~~~~l~h~ 252 (323)
T cd05595 237 RLGGGPSDAKEVMEHR 252 (323)
T ss_pred hCCCCCCCHHHHHcCC
Confidence 98 899999874
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-41 Score=307.72 Aligned_cols=236 Identities=25% Similarity=0.432 Sum_probs=190.2
Q ss_pred CCCCCccceeeee------cceeeeeecCCC--hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCH
Q 014484 1 MGGRCSKFSICWF------HCHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (423)
Q Consensus 1 ~G~~g~v~~~~~~------~~~~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 72 (423)
.|+||.||++.+. +..+++|.+... ....+.+.+|++.+.+++||||+++++++...+..++||||+++|+|
T Consensus 9 ~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~~~g~L 88 (259)
T PF07714_consen 9 EGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYCPGGSL 88 (259)
T ss_dssp EESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--TTEBH
T ss_pred cCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccccccccc
Confidence 4899999999998 677888888543 23468899999999999999999999999988889999999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC------Ccccc
Q 014484 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------KSYST 146 (423)
Q Consensus 73 ~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~------~~~~~ 146 (423)
.+++.......+++..++.|+.||+.||.|||+++ ++|++|+++||+++.++.+||+|||++...... .....
T Consensus 89 ~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~-iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~~~~~~~ 167 (259)
T PF07714_consen 89 DDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNN-IIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYKNDSSQQL 167 (259)
T ss_dssp HHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTT-EEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEEESTTSES
T ss_pred ccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccccc
Confidence 99998754678999999999999999999999999 999999999999999999999999998876322 22345
Q ss_pred CcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhc
Q 014484 147 NLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCL 225 (423)
Q Consensus 147 t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 225 (423)
...|+|||.+.+..++.++||||||+++|||++ |..|+... ....+...+........+..++..+.+++.+||
T Consensus 168 ~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~C~ 242 (259)
T PF07714_consen 168 PLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDY-----DNEEIIEKLKQGQRLPIPDNCPKDIYSLIQQCW 242 (259)
T ss_dssp GGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTS-----CHHHHHHHHHTTEETTSBTTSBHHHHHHHHHHT
T ss_pred cccccccccccccccccccccccccccccccccccccccccc-----ccccccccccccccceeccchhHHHHHHHHHHc
Confidence 678999999998889999999999999999999 56666543 112222222223333455567888999999999
Q ss_pred ccCcCCCCCHHHHHHHH
Q 014484 226 QSEARERPNAKSLVISL 242 (423)
Q Consensus 226 ~~dp~~Rps~~~vl~~l 242 (423)
..||.+|||+.++++.|
T Consensus 243 ~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 243 SHDPEKRPSFQEILQEL 259 (259)
T ss_dssp -SSGGGS--HHHHHHHH
T ss_pred CCChhhCcCHHHHHhcC
Confidence 99999999999999865
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-40 Score=304.64 Aligned_cols=238 Identities=18% Similarity=0.187 Sum_probs=197.9
Q ss_pred CCCCccceeee--ecceeeeeecCCChhh---------------HHHHHHHHHHHhcCCCCCccceEeEEEeC--CceeE
Q 014484 2 GGRCSKFSICW--FHCHLKSSVLESSDLG---------------ETLNLEEAKAVGNLRSERLANLIGCCYEA--DERLL 62 (423)
Q Consensus 2 G~~g~v~~~~~--~~~~~~~~~~~~~~~~---------------~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~l 62 (423)
|.||.|-.+.. .+..+|+|++.+.+.. .+...+||.+|++|.|||||+++++..+. +.+||
T Consensus 108 G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiEvLDDP~s~~~Yl 187 (576)
T KOG0585|consen 108 GQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIEVLDDPESDKLYL 187 (576)
T ss_pred CccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEEeecCcccCceEE
Confidence 78888888876 3788999998665532 23678899999999999999999999765 46899
Q ss_pred EEecCCCCCHHhhhccCCCCC-CCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC
Q 014484 63 VAEFMPNETLAKHLFHWETQP-MKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG 141 (423)
Q Consensus 63 v~e~~~~~~L~~~i~~~~~~~-~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 141 (423)
|+|||..|.+...- ...+ +++.++++++++++.||+|||.+| ||||||||+|+||+.+|++||+|||.+.....+
T Consensus 188 Vley~s~G~v~w~p---~d~~els~~~Ar~ylrDvv~GLEYLH~Qg-iiHRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~ 263 (576)
T KOG0585|consen 188 VLEYCSKGEVKWCP---PDKPELSEQQARKYLRDVVLGLEYLHYQG-IIHRDIKPSNLLLSSDGTVKISDFGVSNEFPQG 263 (576)
T ss_pred EEEeccCCccccCC---CCcccccHHHHHHHHHHHHHHHHHHHhcC-eeccccchhheEEcCCCcEEeeccceeeecccC
Confidence 99999988875433 4455 999999999999999999999999 999999999999999999999999998755322
Q ss_pred ---------CccccCcccCCccccccCC----CCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCC
Q 014484 142 ---------KSYSTNLAFTPPEYMRTGR----VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGH 208 (423)
Q Consensus 142 ---------~~~~~t~~y~aPE~~~~~~----~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (423)
....||+.|+|||.+.++. .+.+.||||+||+||.|+.|+.||... .....+.+++...+..+
T Consensus 264 ~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~----~~~~l~~KIvn~pL~fP 339 (576)
T KOG0585|consen 264 SDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDD----FELELFDKIVNDPLEFP 339 (576)
T ss_pred CccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccc----hHHHHHHHHhcCcccCC
Confidence 2357999999999888643 467899999999999999999999876 34444555666555545
Q ss_pred CChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhh
Q 014484 209 FSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQK 247 (423)
Q Consensus 209 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~~~ 247 (423)
..+++.+++.++|.+||.+||.+|.++.+|..|.+....
T Consensus 340 ~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 340 ENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD 378 (576)
T ss_pred CcccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence 555678899999999999999999999999999876543
|
|
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-40 Score=305.90 Aligned_cols=240 Identities=20% Similarity=0.257 Sum_probs=187.4
Q ss_pred CCCCccceeeee------------------cceeeeeecCCC--hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCcee
Q 014484 2 GGRCSKFSICWF------------------HCHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERL 61 (423)
Q Consensus 2 G~~g~v~~~~~~------------------~~~~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 61 (423)
|+||.||.+.+. +..+++|++... ......+.+|++++..++||||+++++++...+..+
T Consensus 16 G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 95 (304)
T cd05096 16 GQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLLGVCVDEDPLC 95 (304)
T ss_pred cCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEecCCceE
Confidence 899999998753 224677776553 334567899999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCC-----------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCC
Q 014484 62 LVAEFMPNETLAKHLFHWE-----------------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKD 124 (423)
Q Consensus 62 lv~e~~~~~~L~~~i~~~~-----------------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~ 124 (423)
+||||+++++|.+++.... ...+++..++.++.||+.||.|||+++ |+||||||+|||++.+
T Consensus 96 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~-ivH~dlkp~Nill~~~ 174 (304)
T cd05096 96 MITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN-FVHRDLATRNCLVGEN 174 (304)
T ss_pred EEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC-ccccCcchhheEEcCC
Confidence 9999999999999885321 124778899999999999999999999 9999999999999999
Q ss_pred CCeEEccccccccCCCCC------ccccCcccCCccccccCCCCCCcceehhHHHHHHHhhCC--CCCCchhhHHhhhch
Q 014484 125 GNPRLSSFGLMKNSRDGK------SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGK--HIPPSHALDLIRSKN 196 (423)
Q Consensus 125 ~~~kl~Dfg~~~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~--~~~~~~~~~~~~~~~ 196 (423)
+.+||+|||+++...... ...++..|+|||.+.++.++.++|||||||++|+|+++. .|+.......... .
T Consensus 175 ~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~-~ 253 (304)
T cd05096 175 LTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIE-N 253 (304)
T ss_pred ccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHH-H
Confidence 999999999987654322 233477899999998888999999999999999998754 4443321111110 0
Q ss_pred hhhhc---cccccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 197 FLLLM---DSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 197 ~~~~~---~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
..... ........++.++..+.+++.+||+.||.+|||+.+|.+.|.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 254 AGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred HHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 11111 111112234456788999999999999999999999988775
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-40 Score=325.81 Aligned_cols=234 Identities=16% Similarity=0.186 Sum_probs=191.0
Q ss_pred CCCCccceeeee---cceeeeeecCCC-hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhc
Q 014484 2 GGRCSKFSICWF---HCHLKSSVLESS-DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (423)
Q Consensus 2 G~~g~v~~~~~~---~~~~~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~ 77 (423)
|+||.||.+... +..+++|..... ......+.+|+.++..++|||||+++++|..++..|+||||++||+|.+++.
T Consensus 78 G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~ 157 (478)
T PTZ00267 78 NPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIK 157 (478)
T ss_pred CCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCCCCCHHHHHH
Confidence 899999999874 334555544333 3334567789999999999999999999999999999999999999998875
Q ss_pred cC--CCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC------CccccCcc
Q 014484 78 HW--ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------KSYSTNLA 149 (423)
Q Consensus 78 ~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~------~~~~~t~~ 149 (423)
.. ...++++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....||+.
T Consensus 158 ~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~-ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~ 236 (478)
T PTZ00267 158 QRLKEHLPFQEYEVGLLFYQIVLALDEVHSRK-MMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPY 236 (478)
T ss_pred HHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC-EEECCcCHHhEEECCCCcEEEEeCcCceecCCccccccccccCCCcc
Confidence 32 3456899999999999999999999999 999999999999999999999999999865432 23458999
Q ss_pred cCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCc
Q 014484 150 FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEA 229 (423)
Q Consensus 150 y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 229 (423)
|+|||++.+..++.++|||||||++|+|++|..||........ ...... ......+..++.++.++|.+||+.||
T Consensus 237 y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~----~~~~~~-~~~~~~~~~~s~~~~~li~~~L~~dP 311 (478)
T PTZ00267 237 YLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREI----MQQVLY-GKYDPFPCPVSSGMKALLDPLLSKNP 311 (478)
T ss_pred ccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHh-CCCCCCCccCCHHHHHHHHHHhccCh
Confidence 9999999988899999999999999999999998865422111 111111 11123444567889999999999999
Q ss_pred CCCCCHHHHHHH
Q 014484 230 RERPNAKSLVIS 241 (423)
Q Consensus 230 ~~Rps~~~vl~~ 241 (423)
+.|||+++++.+
T Consensus 312 ~~Rps~~~~l~~ 323 (478)
T PTZ00267 312 ALRPTTQQLLHT 323 (478)
T ss_pred hhCcCHHHHHhC
Confidence 999999999865
|
|
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-40 Score=299.07 Aligned_cols=237 Identities=20% Similarity=0.289 Sum_probs=196.5
Q ss_pred CCCCccceeeee-cceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccCC
Q 014484 2 GGRCSKFSICWF-HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80 (423)
Q Consensus 2 G~~g~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~ 80 (423)
|+||.||.+.+. +..+++|.+.......+.+.+|+.++..++|+||+++++++..++..+++|||+++++|.+++....
T Consensus 17 g~~g~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~ 96 (261)
T cd05072 17 GQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDE 96 (261)
T ss_pred cCCceEEEEEecCCceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCCCCcHHHHHHHhc
Confidence 899999999874 4567777776666667789999999999999999999999999999999999999999999997655
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC-----ccccCcccCCccc
Q 014484 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-----SYSTNLAFTPPEY 155 (423)
Q Consensus 81 ~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-----~~~~t~~y~aPE~ 155 (423)
+..+++..+..++.|++.||.|||+++ ++||||||+||+++.++.++|+|||++....... ...++..|+|||.
T Consensus 97 ~~~~~~~~~~~~~~~l~~~l~~LH~~~-i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~ 175 (261)
T cd05072 97 GGKVLLPKLIDFSAQIAEGMAYIERKN-YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEA 175 (261)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccchhhEEecCCCcEEECCCccceecCCCceeccCCCccceecCCHHH
Confidence 667899999999999999999999999 9999999999999999999999999998655322 2234668999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCC
Q 014484 156 MRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (423)
Q Consensus 156 ~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (423)
+.+..++.++|||||||++|+|++ |..||........ ...+...........++.++.+++.+||..+|++|||
T Consensus 176 ~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~ 250 (261)
T cd05072 176 INFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDV-----MSALQRGYRMPRMENCPDELYDIMKTCWKEKAEERPT 250 (261)
T ss_pred hccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHH-----HHHHHcCCCCCCCCCCCHHHHHHHHHHccCCcccCcC
Confidence 988889999999999999999998 8877765322111 1111111122223346778999999999999999999
Q ss_pred HHHHHHHHHh
Q 014484 235 AKSLVISLMS 244 (423)
Q Consensus 235 ~~~vl~~l~~ 244 (423)
+++++..|+.
T Consensus 251 ~~~i~~~l~~ 260 (261)
T cd05072 251 FDYLQSVLDD 260 (261)
T ss_pred HHHHHHHHhc
Confidence 9999998875
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-40 Score=312.95 Aligned_cols=232 Identities=19% Similarity=0.232 Sum_probs=192.5
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+... +..+++|++.... .....+.+|++++..++||||+++++++..++..++||||++||+|..+
T Consensus 6 G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~ 85 (325)
T cd05594 6 GTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFH 85 (325)
T ss_pred CCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCCcHHHH
Confidence 899999998863 6678888775432 2345677899999999999999999999999999999999999999998
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHc-CCCeeeccCCCCCeeecCCCCeEEccccccccCCC----CCccccCccc
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSS-KGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNLAF 150 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~~t~~y 150 (423)
+.+ .+.+++..+..++.||+.||.|||+ ++ |+||||||+|||++.++.+||+|||+++.... .....||+.|
T Consensus 86 l~~--~~~l~~~~~~~~~~qi~~aL~~lH~~~~-ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y 162 (325)
T cd05594 86 LSR--ERVFSEDRARFYGAEIVSALDYLHSEKN-VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEY 162 (325)
T ss_pred HHh--cCCCCHHHHHHHHHHHHHHHHHHHhcCC-EEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccccccCCccc
Confidence 853 4579999999999999999999997 78 99999999999999999999999999875332 1234689999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcC
Q 014484 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (423)
Q Consensus 151 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (423)
+|||++.+..++.++|||||||++|+|++|..||.......... .... ....++...++++.+++.+||+.||+
T Consensus 163 ~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~----~i~~--~~~~~p~~~~~~~~~li~~~L~~dP~ 236 (325)
T cd05594 163 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE----LILM--EEIRFPRTLSPEAKSLLSGLLKKDPK 236 (325)
T ss_pred CCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHH----HHhc--CCCCCCCCCCHHHHHHHHHHhhcCHH
Confidence 99999998899999999999999999999999886543221111 1111 11234556678899999999999999
Q ss_pred CCC-----CHHHHHHHH
Q 014484 231 ERP-----NAKSLVISL 242 (423)
Q Consensus 231 ~Rp-----s~~~vl~~l 242 (423)
+|+ ++.++++|.
T Consensus 237 ~R~~~~~~~~~~il~h~ 253 (325)
T cd05594 237 QRLGGGPDDAKEIMQHK 253 (325)
T ss_pred HhCCCCCCCHHHHhcCC
Confidence 996 899999874
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-40 Score=296.54 Aligned_cols=236 Identities=19% Similarity=0.206 Sum_probs=202.3
Q ss_pred CCCCccceeeeec--ceeeeeecCCChh----hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWFH--CHLKSSVLESSDL----GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~~--~~~~~~~~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|.-|.||.+...+ ...|+|++++... ...+.+.|-+||+.++||.++.+|..|+.++..|++||||+||+|...
T Consensus 88 GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~meyCpGGdL~~L 167 (459)
T KOG0610|consen 88 GDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVMEYCPGGDLHSL 167 (459)
T ss_pred CCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEecCCCccHHHH
Confidence 7789999998864 7788898877553 344667899999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCC----------------
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSR---------------- 139 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~---------------- 139 (423)
+++..++.+++..+.-++.+++.||+|||..| ||+|||||+||||.++|++-|+||.++....
T Consensus 168 rqkQp~~~fse~~aRFYaAEvl~ALEYLHmlG-ivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~ 246 (459)
T KOG0610|consen 168 RQKQPGKRFSESAARFYAAEVLLALEYLHMLG-IVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGS 246 (459)
T ss_pred HhhCCCCccchhhHHHHHHHHHHHHHHHHhhc-eeeccCCcceeEEecCCcEEeeeccccccCCCCCeeeccCCCCCCCC
Confidence 99888899999999999999999999999999 9999999999999999999999999764211
Q ss_pred --------------------C------------------------CCccccCcccCCccccccCCCCCCcceehhHHHHH
Q 014484 140 --------------------D------------------------GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLL 175 (423)
Q Consensus 140 --------------------~------------------------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~ 175 (423)
. ..+++||-.|.|||++.|..-+.+.|+|+|||++|
T Consensus 247 ~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflY 326 (459)
T KOG0610|consen 247 QPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLY 326 (459)
T ss_pred CcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCchhhHHHHHHHHH
Confidence 0 01235688999999999999999999999999999
Q ss_pred HHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCC----HHHHHHHH
Q 014484 176 DLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN----AKSLVISL 242 (423)
Q Consensus 176 el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps----~~~vl~~l 242 (423)
||+.|..||.+.. ..+.+..++...+.-.-.+..+..+++||+++|.+||.+|.. +.||-+|-
T Consensus 327 EmLyG~TPFKG~~----~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~Hp 393 (459)
T KOG0610|consen 327 EMLYGTTPFKGSN----NKETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHP 393 (459)
T ss_pred HHHhCCCCcCCCC----chhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccccchHHhhcCc
Confidence 9999999999873 334455555555444444467889999999999999999977 88887763
|
|
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-40 Score=304.67 Aligned_cols=239 Identities=17% Similarity=0.230 Sum_probs=193.1
Q ss_pred CCCCccceeeee--cceeeeeecCCChh----hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDL----GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.+. +..+++|.+..... ....+..|+++++.++|+||+++.+++..+...++||||++||+|..+
T Consensus 4 G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~ 83 (280)
T cd05608 4 GGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDLRYH 83 (280)
T ss_pred CCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCHHHH
Confidence 899999998874 56777777654322 235677899999999999999999999999999999999999999887
Q ss_pred hcc--CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcc
Q 014484 76 LFH--WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLA 149 (423)
Q Consensus 76 i~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~ 149 (423)
+.. .....+++..++.++.||+.||.|||+++ |+||||||+||+++.++.++|+|||++...... ....||+.
T Consensus 84 ~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~ 162 (280)
T cd05608 84 IYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR-IIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAGTPG 162 (280)
T ss_pred HHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEeeCccceecCCCCccccccCCCcC
Confidence 742 13456999999999999999999999999 999999999999999999999999998765433 23467899
Q ss_pred cCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCc
Q 014484 150 FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEA 229 (423)
Q Consensus 150 y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 229 (423)
|+|||.+.+..++.++|+|||||++|+|++|..||................... ...++..++.++.+++.+||+.||
T Consensus 163 y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~P 240 (280)
T cd05608 163 FMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILND--SVTYPDKFSPASKSFCEALLAKDP 240 (280)
T ss_pred ccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhccc--CCCCcccCCHHHHHHHHHHhcCCH
Confidence 999999999899999999999999999999999886532111111111111111 123445577889999999999999
Q ss_pred CCCC-----CHHHHHHHHH
Q 014484 230 RERP-----NAKSLVISLM 243 (423)
Q Consensus 230 ~~Rp-----s~~~vl~~l~ 243 (423)
++|| +++++++|-+
T Consensus 241 ~~R~~~~~~~~~~~l~h~~ 259 (280)
T cd05608 241 EKRLGFRDGNCDGLRTHPL 259 (280)
T ss_pred HHhcCCCCCCHHHHhcChh
Confidence 9999 7788888743
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-40 Score=314.27 Aligned_cols=244 Identities=20% Similarity=0.283 Sum_probs=205.1
Q ss_pred CCCCccceeeeec-----ce-eeeeecCC----ChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCC
Q 014484 2 GGRCSKFSICWFH-----CH-LKSSVLES----SDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNET 71 (423)
Q Consensus 2 G~~g~v~~~~~~~-----~~-~~~~~~~~----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 71 (423)
|.||.||.+.+.. .. ||++.... .......|++|.+++++++|||||+++|++.....+++|||+|.||+
T Consensus 168 GaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ivmEl~~gGs 247 (474)
T KOG0194|consen 168 GAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLVMELCNGGS 247 (474)
T ss_pred ccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEEEEecCCCc
Confidence 8999999999852 12 57766653 24457789999999999999999999999999999999999999999
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCCc----cccC
Q 014484 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS----YSTN 147 (423)
Q Consensus 72 L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~----~~~t 147 (423)
|.+++++.. ..++..+..+++.+.+.||+|||+++ +|||||-..|+|++.++.+||+|||+++....... ..-+
T Consensus 248 L~~~L~k~~-~~v~~~ek~~~~~~AA~Gl~YLh~k~-~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~~~~~~~klP 325 (474)
T KOG0194|consen 248 LDDYLKKNK-KSLPTLEKLRFCYDAARGLEYLHSKN-CIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYVMKKFLKKLP 325 (474)
T ss_pred HHHHHHhCC-CCCCHHHHHHHHHHHHhHHHHHHHCC-CcchhHhHHHheecCCCeEEeCccccccCCcceeeccccccCc
Confidence 999998633 36999999999999999999999999 99999999999999999999999999876642211 2246
Q ss_pred cccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcc
Q 014484 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (423)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (423)
..|+|||.+....++.++|||||||++||+++ |..|+++..... ....+.....+...+...|.++..++.+||.
T Consensus 326 irWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~----v~~kI~~~~~r~~~~~~~p~~~~~~~~~c~~ 401 (474)
T KOG0194|consen 326 IRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYE----VKAKIVKNGYRMPIPSKTPKELAKVMKQCWK 401 (474)
T ss_pred ceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHH----HHHHHHhcCccCCCCCCCHHHHHHHHHHhcc
Confidence 89999999999999999999999999999998 677877743221 1222224455556666778999999999999
Q ss_pred cCcCCCCCHHHHHHHHHhhhhhccC
Q 014484 227 SEARERPNAKSLVISLMSLQKEAEV 251 (423)
Q Consensus 227 ~dp~~Rps~~~vl~~l~~~~~~~~~ 251 (423)
.||+.|||+.++.+.++.+......
T Consensus 402 ~~p~~R~tm~~i~~~l~~~~~~~~~ 426 (474)
T KOG0194|consen 402 KDPEDRPTMSTIKKKLEALEKKKEA 426 (474)
T ss_pred CChhhccCHHHHHHHHHHHHhcccc
Confidence 9999999999999999998876544
|
|
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-40 Score=312.10 Aligned_cols=239 Identities=16% Similarity=0.132 Sum_probs=194.9
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.+. +..+++|++.... .....+.+|+.++..++||||+++++++..++..|+||||++|++|.++
T Consensus 12 G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~ 91 (333)
T cd05600 12 GGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAMEYVPGGDFRTL 91 (333)
T ss_pred cCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEeCCCCCCHHHH
Confidence 899999999985 5778888875432 2345678999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-CccccCcccCCcc
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSYSTNLAFTPPE 154 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~~t~~y~aPE 154 (423)
+.. .+.+++..+..++.|++.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....||+.|+|||
T Consensus 92 l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~~~~~gt~~y~aPE 168 (333)
T cd05600 92 LNN--LGVLSEDHARFYMAEMFEAVDALHELG-YIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANSVVGSPDYMAPE 168 (333)
T ss_pred HHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEECCCCCEEEEeCcCCcccccccCCcccCccccChh
Confidence 953 457899999999999999999999999 999999999999999999999999998765542 4457899999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhch--hhhhccccccCCCChhHHHHHHHHHHHhcccCcCCC
Q 014484 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKN--FLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (423)
Q Consensus 155 ~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (423)
.+.+..++.++|||||||++|||++|..||............ ................++.++.+++.+||..+|.+|
T Consensus 169 ~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr 248 (333)
T cd05600 169 VLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRF 248 (333)
T ss_pred HhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhc
Confidence 999889999999999999999999999998654222111100 000011000000112457889999999999999999
Q ss_pred CCHHHHHHHHH
Q 014484 233 PNAKSLVISLM 243 (423)
Q Consensus 233 ps~~~vl~~l~ 243 (423)
||++++++|..
T Consensus 249 ~s~~~ll~h~~ 259 (333)
T cd05600 249 GSLEDIKNHPF 259 (333)
T ss_pred CCHHHHHhCcc
Confidence 99999998854
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-41 Score=299.43 Aligned_cols=236 Identities=20% Similarity=0.218 Sum_probs=187.9
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCc-----eeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADE-----RLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-----~~lv~e~~~~~~L~~ 74 (423)
|+||.||.+... ...+|+|..-.++. .--+|+++|+.++|||||++.-+|..... ..+||||++. +|.+
T Consensus 35 GsFg~Vyq~~~~e~~~~vAIKKv~~d~r---~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleymP~-tL~~ 110 (364)
T KOG0658|consen 35 GSFGVVYQAKLRETEEEVAIKKVLQDKR---YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYMPE-TLYR 110 (364)
T ss_pred cccceEEEEEEcCCCceeEEEEecCCCC---cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhchH-HHHH
Confidence 999999999986 46677766554443 23369999999999999999998875432 3599999987 9999
Q ss_pred hhcc--CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCC-CCeEEccccccccCCCC---CccccCc
Q 014484 75 HLFH--WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKD-GNPRLSSFGLMKNSRDG---KSYSTNL 148 (423)
Q Consensus 75 ~i~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~-~~~kl~Dfg~~~~~~~~---~~~~~t~ 148 (423)
++++ ..++.++.-.+.-+..||++||.|||+.| |+||||||.|+|+|.+ |.+||||||.|+....+ .+...|.
T Consensus 111 ~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~-IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~epniSYicSR 189 (364)
T KOG0658|consen 111 VIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHG-ICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEPNISYICSR 189 (364)
T ss_pred HHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcC-cccCCCChheEEEcCCCCeEEeccCCcceeeccCCCceeEEEec
Confidence 9963 13567899999999999999999999999 9999999999999876 89999999999977654 3456799
Q ss_pred ccCCccccccCC-CCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhch-----------------------hhhhcccc
Q 014484 149 AFTPPEYMRTGR-VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKN-----------------------FLLLMDSA 204 (423)
Q Consensus 149 ~y~aPE~~~~~~-~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~-----------------------~~~~~~~~ 204 (423)
.|+|||.+.|.. |+.+.||||.|||+.||+-|++.|++......-... ..++....
T Consensus 190 yYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~ 269 (364)
T KOG0658|consen 190 YYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHP 269 (364)
T ss_pred cccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCccccccc
Confidence 999999888765 999999999999999999999999886322111110 01111111
Q ss_pred ccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHH
Q 014484 205 LEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISL 242 (423)
Q Consensus 205 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l 242 (423)
....+....+++..+|+.++|+.+|.+|.++.+++.|-
T Consensus 270 ~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~ 307 (364)
T KOG0658|consen 270 WHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHP 307 (364)
T ss_pred ceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcch
Confidence 11113445688999999999999999999999999873
|
|
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-39 Score=297.03 Aligned_cols=237 Identities=20% Similarity=0.304 Sum_probs=195.7
Q ss_pred CCCCccceeeee-cceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccCC
Q 014484 2 GGRCSKFSICWF-HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80 (423)
Q Consensus 2 G~~g~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~ 80 (423)
|++|.||++.+. +..+++|.+.........+.+|+.++++++||||+++++++...+..++||||+++++|.+++....
T Consensus 17 g~~~~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~ 96 (261)
T cd05068 17 GQFGEVWEGLWNNTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGA 96 (261)
T ss_pred cCCccEEEEEecCCeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecccCCcHHHHHhccC
Confidence 899999999874 4567777776655556788999999999999999999999999999999999999999999997544
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCCc--ccc---CcccCCccc
Q 014484 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS--YST---NLAFTPPEY 155 (423)
Q Consensus 81 ~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~--~~~---t~~y~aPE~ 155 (423)
+..+++..+..++.|++.||.+||+++ ++||||||+||+++.++.++|+|||+++....... ..+ +..|+|||.
T Consensus 97 ~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~ 175 (261)
T cd05068 97 GRALKLPQLIDMAAQVASGMAYLEAQN-YIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEA 175 (261)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCCcceEEEcCCCCEEECCcceEEEccCCcccccCCCcCceeccCccc
Confidence 557999999999999999999999999 99999999999999999999999999886653211 122 357999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCC
Q 014484 156 MRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (423)
Q Consensus 156 ~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (423)
+.+..++.++|+||||+++++|++ |..||...... .....+........+...+..+.+++.+||+.+|.+||+
T Consensus 176 ~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~ 250 (261)
T cd05068 176 ALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA-----EVLQQVDQGYRMPCPPGCPKELYDIMLDCWKEDPDDRPT 250 (261)
T ss_pred cccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH-----HHHHHHHcCCCCCCCCcCCHHHHHHHHHHhhcCcccCCC
Confidence 998889999999999999999999 88777553211 111111112222334456788999999999999999999
Q ss_pred HHHHHHHHHh
Q 014484 235 AKSLVISLMS 244 (423)
Q Consensus 235 ~~~vl~~l~~ 244 (423)
+.++++.|+.
T Consensus 251 ~~~l~~~l~~ 260 (261)
T cd05068 251 FETLQWKLED 260 (261)
T ss_pred HHHHHHHHhc
Confidence 9999998875
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-40 Score=308.67 Aligned_cols=232 Identities=18% Similarity=0.235 Sum_probs=191.8
Q ss_pred CCCCccceeeee-----cceeeeeecCCCh-----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCC
Q 014484 2 GGRCSKFSICWF-----HCHLKSSVLESSD-----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNET 71 (423)
Q Consensus 2 G~~g~v~~~~~~-----~~~~~~~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 71 (423)
|+||.||.+... +..+++|++.... .....+..|+.+++.++||||+++++++..++..|+||||++|++
T Consensus 7 G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~ 86 (323)
T cd05584 7 GGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEYLSGGE 86 (323)
T ss_pred cCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeCCCCch
Confidence 899999998752 5667888765432 223456789999999999999999999999999999999999999
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccC
Q 014484 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTN 147 (423)
Q Consensus 72 L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t 147 (423)
|.+++.+ .+.+++..+..++.|++.||.|||+++ |+||||||+|||++.++.++|+|||+++..... ....||
T Consensus 87 L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt 163 (323)
T cd05584 87 LFMHLER--EGIFMEDTACFYLSEISLALEHLHQQG-IIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTHTFCGT 163 (323)
T ss_pred HHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCcccccCCC
Confidence 9999854 456889999999999999999999999 999999999999999999999999998743322 234689
Q ss_pred cccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhccc
Q 014484 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQS 227 (423)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 227 (423)
+.|+|||++.+..++.++|||||||++|||++|..||........ ....... ...++..+++++.++|.+||+.
T Consensus 164 ~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~----~~~~~~~--~~~~~~~~~~~~~~li~~~l~~ 237 (323)
T cd05584 164 IEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKT----IDKILKG--KLNLPPYLTPEARDLLKKLLKR 237 (323)
T ss_pred ccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHH----HHHHHcC--CCCCCCCCCHHHHHHHHHHccc
Confidence 999999999988899999999999999999999998876422211 1111111 1234556678899999999999
Q ss_pred CcCCCC-----CHHHHHHHH
Q 014484 228 EARERP-----NAKSLVISL 242 (423)
Q Consensus 228 dp~~Rp-----s~~~vl~~l 242 (423)
||++|| ++++++.|.
T Consensus 238 ~p~~R~~~~~~~~~~l~~h~ 257 (323)
T cd05584 238 NPSSRLGAGPGDAAEVQSHP 257 (323)
T ss_pred CHhHcCCCCCCCHHHHhcCC
Confidence 999999 899998874
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-39 Score=296.10 Aligned_cols=234 Identities=20% Similarity=0.305 Sum_probs=191.4
Q ss_pred CCCCccceeeeec-ceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccCC
Q 014484 2 GGRCSKFSICWFH-CHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80 (423)
Q Consensus 2 G~~g~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~ 80 (423)
|+||.||.+.+.. ..+++|.+.........+.+|+.+++.++||||+++++++..++..++||||+++|+|.+++...
T Consensus 15 G~~~~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~- 93 (256)
T cd05114 15 GQFGVVHLGKWRAQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQR- 93 (256)
T ss_pred CcCceEEEEEeccCceEEEEecccCCccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCCCcHHHHHHhC-
Confidence 8999999998853 46777776665556678899999999999999999999999999999999999999999998642
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC-----ccccCcccCCccc
Q 014484 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-----SYSTNLAFTPPEY 155 (423)
Q Consensus 81 ~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-----~~~~t~~y~aPE~ 155 (423)
...+++..+..++.|++.||.|||+++ ++||||||+||+++.++.++|+|||.++...... ...++..|+|||.
T Consensus 94 ~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~ 172 (256)
T cd05114 94 QGKLSKDMLLSMCQDVCEGMEYLERNS-FIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEV 172 (256)
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHCC-ccccccCcceEEEcCCCeEEECCCCCccccCCCceeccCCCCCchhhCChhh
Confidence 246899999999999999999999999 9999999999999999999999999987654322 1234568999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCC
Q 014484 156 MRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (423)
Q Consensus 156 ~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (423)
+.+..++.++|+||||+++|+|++ |..||........ ... +........+...+.++.+++.+||+.||++|||
T Consensus 173 ~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~----~~~-i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps 247 (256)
T cd05114 173 FNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEV----VEM-ISRGFRLYRPKLASMTVYEVMYSCWHEKPEGRPT 247 (256)
T ss_pred cccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHH----HHH-HHCCCCCCCCCCCCHHHHHHHHHHccCCcccCcC
Confidence 988889999999999999999999 7777754321111 111 1111112233445678999999999999999999
Q ss_pred HHHHHHHH
Q 014484 235 AKSLVISL 242 (423)
Q Consensus 235 ~~~vl~~l 242 (423)
++++++.|
T Consensus 248 ~~~l~~~l 255 (256)
T cd05114 248 FAELLRAI 255 (256)
T ss_pred HHHHHHhh
Confidence 99999875
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-40 Score=313.12 Aligned_cols=236 Identities=15% Similarity=0.170 Sum_probs=188.5
Q ss_pred CCCCccceeeee--cceeeeeecCCCh--hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~ 77 (423)
|+||.||++.+. +..+++|++.... .....+.+|++++..++|+||+++++++..++..++||||+.+++|....
T Consensus 85 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~- 163 (353)
T PLN00034 85 GAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDGGSLEGTH- 163 (353)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCCCCcccccc-
Confidence 899999999875 6778888775432 33567889999999999999999999999999999999999999986543
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccCCc
Q 014484 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPP 153 (423)
Q Consensus 78 ~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~aP 153 (423)
..++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....||..|+||
T Consensus 164 -----~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aP 237 (353)
T PLN00034 164 -----IADEQFLADVARQILSGIAYLHRRH-IVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCNSSVGTIAYMSP 237 (353)
T ss_pred -----cCCHHHHHHHHHHHHHHHHHHHHCC-EeecCCCHHHEEEcCCCCEEEcccccceecccccccccccccCccccCc
Confidence 3567888999999999999999999 999999999999999999999999998765432 345689999999
Q ss_pred ccccc-----CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccC
Q 014484 154 EYMRT-----GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSE 228 (423)
Q Consensus 154 E~~~~-----~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 228 (423)
|.+.. ...+.++|||||||++|||++|..||.......+.. .............+..++.++.+||.+||+.|
T Consensus 238 E~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~ 315 (353)
T PLN00034 238 ERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWAS--LMCAICMSQPPEAPATASREFRHFISCCLQRE 315 (353)
T ss_pred cccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHH--HHHHHhccCCCCCCCccCHHHHHHHHHHccCC
Confidence 98753 234568999999999999999999886321111111 11111111222334556788999999999999
Q ss_pred cCCCCCHHHHHHHHHhhh
Q 014484 229 ARERPNAKSLVISLMSLQ 246 (423)
Q Consensus 229 p~~Rps~~~vl~~l~~~~ 246 (423)
|++|||+.++++|-.-..
T Consensus 316 P~~Rpt~~ell~hp~~~~ 333 (353)
T PLN00034 316 PAKRWSAMQLLQHPFILR 333 (353)
T ss_pred hhhCcCHHHHhcCccccc
Confidence 999999999999854433
|
|
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-39 Score=301.51 Aligned_cols=239 Identities=16% Similarity=0.225 Sum_probs=190.5
Q ss_pred CCCCCccceeeee--cceeeeeecCCChh----hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 1 MGGRCSKFSICWF--HCHLKSSVLESSDL----GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 1 ~G~~g~v~~~~~~--~~~~~~~~~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
-||||.||.+... +..+++|.+..... ....+..|+++++.++||||+++++++..+...++||||++|++|.+
T Consensus 3 ~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L~~ 82 (277)
T cd05607 3 KGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDLKY 82 (277)
T ss_pred CCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCHHH
Confidence 3999999999874 67788877654322 23455679999999999999999999999999999999999999998
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC---ccccCcccC
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK---SYSTNLAFT 151 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---~~~~t~~y~ 151 (423)
++.......+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++....... ...++..|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~ 161 (277)
T cd05607 83 HIYNVGERGLEMERVIHYSAQITCGILHLHSMD-IVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRAGTNGYM 161 (277)
T ss_pred HHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC-EEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeeccCCCCCcc
Confidence 886545556899999999999999999999999 9999999999999999999999999987655432 345789999
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCC
Q 014484 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARE 231 (423)
Q Consensus 152 aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (423)
|||++.+..++.++|||||||++|+|++|..||...................... .....++.++.+++.+||+.||.+
T Consensus 162 aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~~P~~ 240 (277)
T cd05607 162 APEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVK-FEHQNFTEESKDICRLFLAKKPED 240 (277)
T ss_pred CHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccc-cccccCCHHHHHHHHHHhccCHhh
Confidence 9999998889999999999999999999998886532111111111111111111 112245778999999999999999
Q ss_pred CCCHHHHHHH
Q 014484 232 RPNAKSLVIS 241 (423)
Q Consensus 232 Rps~~~vl~~ 241 (423)
||++.++++.
T Consensus 241 R~~~~~~~~~ 250 (277)
T cd05607 241 RLGSREKNDD 250 (277)
T ss_pred CCCCccchhh
Confidence 9999665533
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=296.20 Aligned_cols=238 Identities=18% Similarity=0.250 Sum_probs=189.5
Q ss_pred CCCCCccceeeee--cceeeeeecCC---ChhhHHHHHHHHHHHhcCCCCCccceEeEEEe-----CCceeEEEecCCCC
Q 014484 1 MGGRCSKFSICWF--HCHLKSSVLES---SDLGETLNLEEAKAVGNLRSERLANLIGCCYE-----ADERLLVAEFMPNE 70 (423)
Q Consensus 1 ~G~~g~v~~~~~~--~~~~~~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-----~~~~~lv~e~~~~~ 70 (423)
.|+||.|..+.+. +..|++|.+.. .....++..+|+++|+.++|+||+.+.+++.. -+.+|+|+|+| +.
T Consensus 32 ~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~elM-et 110 (359)
T KOG0660|consen 32 RGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVFELM-ET 110 (359)
T ss_pred CcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEehhHH-hh
Confidence 4899999999885 67777776652 23456788899999999999999999999976 24589999999 55
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC------Ccc
Q 014484 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------KSY 144 (423)
Q Consensus 71 ~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~------~~~ 144 (423)
+|.+.|+ .++.++...+..++.|+++||+|+|+.+ |+||||||+|+|++.+..+||+|||+|+..... +..
T Consensus 111 DL~~iik--~~~~L~d~H~q~f~YQiLrgLKyiHSAn-ViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~~~~mTeY 187 (359)
T KOG0660|consen 111 DLHQIIK--SQQDLTDDHAQYFLYQILRGLKYIHSAN-VIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFEDGFMTEY 187 (359)
T ss_pred HHHHHHH--cCccccHHHHHHHHHHHHHhcchhhccc-ccccccchhheeeccCCCEEeccccceeeccccCcccchhcc
Confidence 9999995 3556999999999999999999999999 999999999999999999999999999987532 334
Q ss_pred ccCcccCCccccc-cCCCCCCcceehhHHHHHHHhhCCCCCCchhhH-------------------Hhhhch---hhhhc
Q 014484 145 STNLAFTPPEYMR-TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALD-------------------LIRSKN---FLLLM 201 (423)
Q Consensus 145 ~~t~~y~aPE~~~-~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~-------------------~~~~~~---~~~~~ 201 (423)
..|.+|.|||.+. ...|+...||||+|||+.||++|++.|++...- ...... .....
T Consensus 188 VaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~sl 267 (359)
T KOG0660|consen 188 VATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSL 267 (359)
T ss_pred eeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhC
Confidence 5689999999765 456999999999999999999999998864110 011011 11111
Q ss_pred cccccCCC---ChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHH
Q 014484 202 DSALEGHF---SNDEGTELVRLASRCLQSEARERPNAKSLVISL 242 (423)
Q Consensus 202 ~~~~~~~~---~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l 242 (423)
+......+ -+..+++..+++++||..||.+|+|+++.+.|.
T Consensus 268 p~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hP 311 (359)
T KOG0660|consen 268 PQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHP 311 (359)
T ss_pred CCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcCh
Confidence 11111111 124578899999999999999999999999884
|
|
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-39 Score=305.79 Aligned_cols=240 Identities=16% Similarity=0.260 Sum_probs=193.8
Q ss_pred CCCCccceeeee--cc----eeeeeecCCC--hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHH
Q 014484 2 GGRCSKFSICWF--HC----HLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLA 73 (423)
Q Consensus 2 G~~g~v~~~~~~--~~----~~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 73 (423)
|+||.||++.+. +. .+++|.+... ......+.+|+.+++.++||||++++++|... ..++|+||+++|+|.
T Consensus 18 G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~v~e~~~~g~l~ 96 (316)
T cd05108 18 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLL 96 (316)
T ss_pred CCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-CceeeeecCCCCCHH
Confidence 899999999874 22 3667776533 33466788999999999999999999999875 578999999999999
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCCc------cccC
Q 014484 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS------YSTN 147 (423)
Q Consensus 74 ~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~------~~~t 147 (423)
+++.. ....+++..++.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++....... ..++
T Consensus 97 ~~l~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~~-iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~ 174 (316)
T cd05108 97 DYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEERR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVP 174 (316)
T ss_pred HHHHh-ccccCCHHHHHHHHHHHHHHHHHHHhcC-eeccccchhheEecCCCcEEEccccccccccCCCcceeccCCccc
Confidence 99864 2346889999999999999999999999 99999999999999999999999999986653322 2235
Q ss_pred cccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcc
Q 014484 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (423)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (423)
..|+|||.+.+..++.++|||||||++|||++ |..|+....... .............+..++.++.+++.+||.
T Consensus 175 ~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~li~~cl~ 249 (316)
T cd05108 175 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE-----ISSILEKGERLPQPPICTIDVYMIMVKCWM 249 (316)
T ss_pred eeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH-----HHHHHhCCCCCCCCCCCCHHHHHHHHHHcc
Confidence 67999999998899999999999999999998 887776532211 122222222223344567789999999999
Q ss_pred cCcCCCCCHHHHHHHHHhhhhhc
Q 014484 227 SEARERPNAKSLVISLMSLQKEA 249 (423)
Q Consensus 227 ~dp~~Rps~~~vl~~l~~~~~~~ 249 (423)
.||.+|||+.+++..+..+....
T Consensus 250 ~~p~~Rps~~~l~~~l~~~~~~~ 272 (316)
T cd05108 250 IDADSRPKFRELIIEFSKMARDP 272 (316)
T ss_pred CChhhCcCHHHHHHHHHHHHcCC
Confidence 99999999999999998876553
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-39 Score=295.91 Aligned_cols=237 Identities=23% Similarity=0.329 Sum_probs=200.6
Q ss_pred CCCCccceeeeecceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccCCC
Q 014484 2 GGRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWET 81 (423)
Q Consensus 2 G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~ 81 (423)
|+||.||.+...+..+++|.+.......+.+.+|+.++..++|+||+++++++...+..++||||+++++|.+++.....
T Consensus 17 g~~g~v~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~ 96 (256)
T cd05039 17 GEFGDVMLGDYRGQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGR 96 (256)
T ss_pred CCCceEEEEEecCcEEEEEEeccchhHHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCCCcHHHHHHhcCC
Confidence 89999999999999999998877766677899999999999999999999999998899999999999999999975454
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCCc-cccCcccCCccccccCC
Q 014484 82 QPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS-YSTNLAFTPPEYMRTGR 160 (423)
Q Consensus 82 ~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-~~~t~~y~aPE~~~~~~ 160 (423)
..+++..+..++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||+++....... ...+..|+|||.+.+..
T Consensus 97 ~~~~~~~~~~~~~qi~~~l~~lh~~~-i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~ape~~~~~~ 175 (256)
T cd05039 97 AVITLAQQLGFALDVCEGMEYLEEKN-FVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLPVKWTAPEALREKK 175 (256)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCC-ccchhcccceEEEeCCCCEEEcccccccccccccccCCCcccccCchhhcCCc
Confidence 57999999999999999999999999 99999999999999999999999999887644322 23456799999998888
Q ss_pred CCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHH
Q 014484 161 VTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239 (423)
Q Consensus 161 ~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl 239 (423)
++.++|+||||+++++|++ |..||....... .............+...++++.+++.+||..+|++|||+.+++
T Consensus 176 ~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~ 250 (256)
T cd05039 176 FSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD-----VVPHVEKGYRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLR 250 (256)
T ss_pred CCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHH-----HHHHHhcCCCCCCccCCCHHHHHHHHHHhccChhhCcCHHHHH
Confidence 9999999999999999997 887765542221 1111112222334455678899999999999999999999999
Q ss_pred HHHHh
Q 014484 240 ISLMS 244 (423)
Q Consensus 240 ~~l~~ 244 (423)
..|..
T Consensus 251 ~~l~~ 255 (256)
T cd05039 251 EQLAL 255 (256)
T ss_pred HHHhc
Confidence 99865
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-40 Score=310.28 Aligned_cols=231 Identities=19% Similarity=0.222 Sum_probs=190.0
Q ss_pred CCCCccceeee-----ecceeeeeecCCChh---hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHH
Q 014484 2 GGRCSKFSICW-----FHCHLKSSVLESSDL---GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLA 73 (423)
Q Consensus 2 G~~g~v~~~~~-----~~~~~~~~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 73 (423)
|+||.||.+.. .+..+++|++..... ....+.+|++++.+++||||+++++++..++..|+||||+++++|.
T Consensus 7 G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 86 (318)
T cd05582 7 GSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLF 86 (318)
T ss_pred CCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCCCCcHH
Confidence 89999998765 256778887765332 3445678999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcc
Q 014484 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLA 149 (423)
Q Consensus 74 ~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~ 149 (423)
+++.+ ...+++..+..++.||+.||.|||+++ |+||||||+||+++.++.++|+|||+++..... ....||+.
T Consensus 87 ~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~ 163 (318)
T cd05582 87 TRLSK--EVMFTEEDVKFYLAELALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVE 163 (318)
T ss_pred HHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceecccCChh
Confidence 99853 456999999999999999999999999 999999999999999999999999998765433 23468999
Q ss_pred cCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCc
Q 014484 150 FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEA 229 (423)
Q Consensus 150 y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 229 (423)
|+|||.+.+..++.++|||||||++|+|++|..||........ ....... ....+...++++.+++.+||+.||
T Consensus 164 y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~----~~~i~~~--~~~~p~~~~~~~~~li~~~l~~~P 237 (318)
T cd05582 164 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKET----MTMILKA--KLGMPQFLSPEAQSLLRALFKRNP 237 (318)
T ss_pred hcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHH----HHHHHcC--CCCCCCCCCHHHHHHHHHHhhcCH
Confidence 9999999988899999999999999999999998865422111 1111111 122445567889999999999999
Q ss_pred CCCCC-----HHHHHHH
Q 014484 230 RERPN-----AKSLVIS 241 (423)
Q Consensus 230 ~~Rps-----~~~vl~~ 241 (423)
.+||| +++++.+
T Consensus 238 ~~R~~a~~~~~~~~~~~ 254 (318)
T cd05582 238 ANRLGAGPDGVEEIKRH 254 (318)
T ss_pred hHcCCCCCCCHHHHhCC
Confidence 99999 5666655
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-39 Score=295.11 Aligned_cols=234 Identities=19% Similarity=0.244 Sum_probs=191.7
Q ss_pred CCCCccceeeee----cceeeeeecCCCh---hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF----HCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~----~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||++.+. +..+++|++.... ...+.+.+|+.++..++||||+++++++. ++..++||||+++++|.+
T Consensus 6 G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~ 84 (257)
T cd05116 6 GNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELGPLNK 84 (257)
T ss_pred cCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCCcHHH
Confidence 899999999763 4667777765433 23567889999999999999999999886 456789999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCCc-------cccC
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS-------YSTN 147 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-------~~~t 147 (423)
++.. .+.+++..+..++.|++.||.|||+++ ++||||||.||+++.++.++|+|||+++....... ..++
T Consensus 85 ~l~~--~~~~~~~~~~~i~~qi~~al~~lH~~~-i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~ 161 (257)
T cd05116 85 FLQK--NKHVTEKNITELVHQVSMGMKYLEETN-FVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWP 161 (257)
T ss_pred HHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCCCCC
Confidence 9953 456899999999999999999999999 99999999999999999999999999876543321 1235
Q ss_pred cccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcc
Q 014484 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (423)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (423)
..|+|||.+....++.++|+|||||++|||++ |..||..... ......+........+..+++++.++|.+||+
T Consensus 162 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-----~~~~~~i~~~~~~~~~~~~~~~l~~li~~~~~ 236 (257)
T cd05116 162 VKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKG-----NEVTQMIESGERMECPQRCPPEMYDLMKLCWT 236 (257)
T ss_pred ccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHhc
Confidence 78999999988889999999999999999998 8877765321 12222233333334556678899999999999
Q ss_pred cCcCCCCCHHHHHHHHHh
Q 014484 227 SEARERPNAKSLVISLMS 244 (423)
Q Consensus 227 ~dp~~Rps~~~vl~~l~~ 244 (423)
.||++||++.+|...|+.
T Consensus 237 ~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 237 YGVDERPGFAVVELRLRN 254 (257)
T ss_pred cCchhCcCHHHHHHHHhc
Confidence 999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-39 Score=306.75 Aligned_cols=231 Identities=18% Similarity=0.254 Sum_probs=188.6
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHH---hcCCCCCccceEeEEEeCCceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAV---GNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l---~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 72 (423)
|+||.||.+.+. +..+++|++.... ...+.+.+|++++ ..++||||+++++++..++..|+||||++|++|
T Consensus 10 G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L 89 (324)
T cd05589 10 GHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFVMEYAAGGDL 89 (324)
T ss_pred cCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEEEcCCCCCcH
Confidence 899999999875 5678888875432 2234566676665 566899999999999999999999999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCC----CCccccCc
Q 014484 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNL 148 (423)
Q Consensus 73 ~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~~t~ 148 (423)
..++. ...+++..+..++.||+.||.|||+++ ++||||||+||+++.++.+||+|||+++.... .....|++
T Consensus 90 ~~~~~---~~~l~~~~~~~~~~qi~~al~~lH~~~-ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~ 165 (324)
T cd05589 90 MMHIH---TDVFSEPRAVFYAACVVLGLQYLHENK-IVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGDRTSTFCGTP 165 (324)
T ss_pred HHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEecCCCHHHeEECCCCcEEeCcccCCccCCCCCCcccccccCc
Confidence 98884 356999999999999999999999999 99999999999999999999999999875332 23356899
Q ss_pred ccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccC
Q 014484 149 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSE 228 (423)
Q Consensus 149 ~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 228 (423)
.|+|||.+.+..++.++|||||||++|+|++|..||......... ...... ...++..++.++.++|.+||+.|
T Consensus 166 ~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~----~~i~~~--~~~~p~~~~~~~~~li~~~L~~d 239 (324)
T cd05589 166 EFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVF----DSIVND--EVRYPRFLSREAISIMRRLLRRN 239 (324)
T ss_pred cccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHH----HHHHhC--CCCCCCCCCHHHHHHHHHHhhcC
Confidence 999999999888999999999999999999999998764222111 111111 12345556788999999999999
Q ss_pred cCCCC-----CHHHHHHHH
Q 014484 229 ARERP-----NAKSLVISL 242 (423)
Q Consensus 229 p~~Rp-----s~~~vl~~l 242 (423)
|.+|| ++.++++|.
T Consensus 240 P~~R~~~~~~~~~~l~~~~ 258 (324)
T cd05589 240 PERRLGSGEKDAEDVKKQP 258 (324)
T ss_pred HhHcCCCCCCCHHHHhhCC
Confidence 99999 688888764
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-39 Score=294.27 Aligned_cols=235 Identities=21% Similarity=0.282 Sum_probs=190.7
Q ss_pred CCCCccceeeee--cceeeeeecCCC--hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~ 77 (423)
|+||.||++.+. +..+++|..... ......+.+|+++++.++||||+++++++......++||||+++++|.+++.
T Consensus 6 g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~ 85 (252)
T cd05084 6 GNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLR 85 (252)
T ss_pred ccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcHHHHHH
Confidence 899999999874 666777765432 3345678999999999999999999999999999999999999999999985
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCCc------cccCcccC
Q 014484 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS------YSTNLAFT 151 (423)
Q Consensus 78 ~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~------~~~t~~y~ 151 (423)
. .+..+++..++.++.|++.||.|||+++ ++||||||+||+++.++.++|+|||++........ ...+..|+
T Consensus 86 ~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~ 163 (252)
T cd05084 86 T-EGPRLKVKELIQMVENAAAGMEYLESKH-CIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWT 163 (252)
T ss_pred h-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCCceeec
Confidence 4 3446899999999999999999999999 99999999999999999999999999875443211 12245699
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcC
Q 014484 152 PPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (423)
Q Consensus 152 aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (423)
|||.+.+..++.++|||||||++|+|++ |..|+..... ...............+...+..+.+++.+||+.+|+
T Consensus 164 aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~ 238 (252)
T cd05084 164 APEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSN-----QQTREAIEQGVRLPCPELCPDAVYRLMERCWEYDPG 238 (252)
T ss_pred CchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCH-----HHHHHHHHcCCCCCCcccCCHHHHHHHHHHcCCChh
Confidence 9999998889999999999999999998 6666543211 111122222222334555678899999999999999
Q ss_pred CCCCHHHHHHHHH
Q 014484 231 ERPNAKSLVISLM 243 (423)
Q Consensus 231 ~Rps~~~vl~~l~ 243 (423)
+|||+.++++.|.
T Consensus 239 ~Rps~~~~~~~l~ 251 (252)
T cd05084 239 QRPSFSTVHQELQ 251 (252)
T ss_pred hCcCHHHHHHHHh
Confidence 9999999998875
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-39 Score=296.07 Aligned_cols=237 Identities=22% Similarity=0.328 Sum_probs=197.8
Q ss_pred CCCCccceeeee-cceeeeeecCCChh-hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccC
Q 014484 2 GGRCSKFSICWF-HCHLKSSVLESSDL-GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW 79 (423)
Q Consensus 2 G~~g~v~~~~~~-~~~~~~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~ 79 (423)
|+||.||.+.+. +..+++|.+..... ....+..|+.+++.++||||+++++++...+..++||||+++++|.+++.+.
T Consensus 17 g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~ 96 (261)
T cd05148 17 GYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELMEKGSLLAFLRSP 96 (261)
T ss_pred CCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeecccCCHHHHHhcC
Confidence 899999999885 46677777765554 4667889999999999999999999999999999999999999999999765
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccCCccc
Q 014484 80 ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPPEY 155 (423)
Q Consensus 80 ~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~aPE~ 155 (423)
.+..+++..+..++.|++.||.|||+++ ++|+||+|+||+++.++.++|+|||++...... ....++..|++||.
T Consensus 97 ~~~~~~~~~~~~~~~~i~~al~~lH~~~-i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~PE~ 175 (261)
T cd05148 97 EGQVLPVASLIDMACQVAEGMAYLEEQN-SIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEA 175 (261)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccCcceEEEcCCceEEEccccchhhcCCccccccCCCCceEecCHHH
Confidence 5667999999999999999999999999 999999999999999999999999998765432 12334678999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCC
Q 014484 156 MRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (423)
Q Consensus 156 ~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (423)
+.+..++.++||||||+++|+|++ |..|+...... ..............+..+++.+.+++.+||+.||.+|||
T Consensus 176 ~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt 250 (261)
T cd05148 176 ASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNH-----EVYDQITAGYRMPCPAKCPQEIYKIMLECWAAEPEDRPS 250 (261)
T ss_pred HccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHH-----HHHHHHHhCCcCCCCCCCCHHHHHHHHHHcCCCchhCcC
Confidence 988889999999999999999998 77777553211 111111122233345566788999999999999999999
Q ss_pred HHHHHHHHHh
Q 014484 235 AKSLVISLMS 244 (423)
Q Consensus 235 ~~~vl~~l~~ 244 (423)
+.++++.|+.
T Consensus 251 ~~~l~~~L~~ 260 (261)
T cd05148 251 FKALREELDN 260 (261)
T ss_pred HHHHHHHHhc
Confidence 9999999875
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-39 Score=313.66 Aligned_cols=240 Identities=20% Similarity=0.282 Sum_probs=193.3
Q ss_pred CCCCccceeeeec-------ceeeeeecCCCh--hhHHHHHHHHHHHhcCC-CCCccceEeEEEeCCceeEEEecCCCCC
Q 014484 2 GGRCSKFSICWFH-------CHLKSSVLESSD--LGETLNLEEAKAVGNLR-SERLANLIGCCYEADERLLVAEFMPNET 71 (423)
Q Consensus 2 G~~g~v~~~~~~~-------~~~~~~~~~~~~--~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~~~ 71 (423)
|+||.||++.+.+ ..+++|++.... ...+.+.+|++++..+. ||||++++++|...+..|+|||||++|+
T Consensus 48 G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~ 127 (400)
T cd05105 48 GAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGD 127 (400)
T ss_pred CCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCceEEEEEecCCCc
Confidence 8999999998742 247777775432 33567899999999995 9999999999999999999999999999
Q ss_pred HHhhhccCC-----------------------------------------------------------------------
Q 014484 72 LAKHLFHWE----------------------------------------------------------------------- 80 (423)
Q Consensus 72 L~~~i~~~~----------------------------------------------------------------------- 80 (423)
|.+++....
T Consensus 128 L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (400)
T cd05105 128 LVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKEASKYSDIQRSN 207 (400)
T ss_pred HHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhhhhhhhhhcccCc
Confidence 998875321
Q ss_pred -----------------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEcccccccc
Q 014484 81 -----------------------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKN 137 (423)
Q Consensus 81 -----------------------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~ 137 (423)
...+++..+..++.|++.||.|||+++ ++||||||+||+++.++.++|+|||+++.
T Consensus 208 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivH~dikp~Nill~~~~~~kL~DfGla~~ 286 (400)
T cd05105 208 YDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKN-CVHRDLAARNVLLAQGKIVKICDFGLARD 286 (400)
T ss_pred ccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChHhEEEeCCCEEEEEeCCccee
Confidence 124788889999999999999999999 99999999999999999999999999876
Q ss_pred CCCCC------ccccCcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCC
Q 014484 138 SRDGK------SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFS 210 (423)
Q Consensus 138 ~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (423)
..... ...++..|+|||.+.+..++.++|||||||++|+|++ |..||+...... .....+........+
T Consensus 287 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~----~~~~~~~~~~~~~~~ 362 (400)
T cd05105 287 IMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDS----TFYNKIKSGYRMAKP 362 (400)
T ss_pred ccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhH----HHHHHHhcCCCCCCC
Confidence 54321 2335678999999988889999999999999999997 877776532111 111112222223344
Q ss_pred hhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhh
Q 014484 211 NDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQ 246 (423)
Q Consensus 211 ~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~~ 246 (423)
..++.++.+++.+||+.||++|||+.++.+.|.++.
T Consensus 363 ~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 363 DHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL 398 (400)
T ss_pred ccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence 566788999999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-40 Score=314.47 Aligned_cols=234 Identities=21% Similarity=0.214 Sum_probs=194.6
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.+. +..+++|++.... .....+..|++++..++||||+++++++.+++..++||||++|++|.++
T Consensus 12 G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 91 (350)
T cd05573 12 GAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVMEYMPGGDLMNL 91 (350)
T ss_pred CCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEcCCCCCCHHHH
Confidence 899999999986 7788888876533 2345788999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC-------------
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK------------- 142 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~------------- 142 (423)
+.+ .+.+++..+..++.||+.||.|||++| |+||||||+||+++.++.++|+|||++.......
T Consensus 92 l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~g-iiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~ 168 (350)
T cd05573 92 LIR--KDVFPEETARFYIAELVLALDSVHKLG-FIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLL 168 (350)
T ss_pred HHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHeEECCCCCEEeecCCCCccCcccCccccccccccccc
Confidence 964 367999999999999999999999999 9999999999999999999999999987654332
Q ss_pred --------------------ccccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhcc
Q 014484 143 --------------------SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD 202 (423)
Q Consensus 143 --------------------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~ 202 (423)
...||+.|+|||.+.+..++.++|||||||++|+|++|..||....... ....+..
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~----~~~~i~~ 244 (350)
T cd05573 169 FRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQE----TYNKIIN 244 (350)
T ss_pred ccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHH----HHHHHhc
Confidence 3457899999999999899999999999999999999999987643211 1111211
Q ss_pred --ccccCCCChhHHHHHHHHHHHhcccCcCCCCC-HHHHHHHHH
Q 014484 203 --SALEGHFSNDEGTELVRLASRCLQSEARERPN-AKSLVISLM 243 (423)
Q Consensus 203 --~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps-~~~vl~~l~ 243 (423)
..........+++++.++|.+||. ||.+||+ ++++++|..
T Consensus 245 ~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~ 287 (350)
T cd05573 245 WKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPF 287 (350)
T ss_pred cCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCC
Confidence 111111122257889999999997 9999999 999998853
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-40 Score=310.85 Aligned_cols=237 Identities=19% Similarity=0.323 Sum_probs=194.8
Q ss_pred CCCCccceeeeecceeeeeecCCC---hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICWFHCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
|+||.||++.|+|. ||+|++... ....+.|.+|+.++++-+|.||+-+.|+|..... .||+-+|+|.+|..+|.-
T Consensus 403 GsFGtV~Rg~whGd-VAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiTqwCeGsSLY~hlHv 480 (678)
T KOG0193|consen 403 GSFGTVYRGRWHGD-VAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AIITQWCEGSSLYTHLHV 480 (678)
T ss_pred ccccceeecccccc-eEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eeeehhccCchhhhhccc
Confidence 89999999999975 566666443 3457789999999999999999999999998886 899999999999999953
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCC------CCCccccCcccCC
Q 014484 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSR------DGKSYSTNLAFTP 152 (423)
Q Consensus 79 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~------~~~~~~~t~~y~a 152 (423)
....|.....+.|+.||+.|+.|||.++ |||||||..||++.+++.+||+|||++.... .-....|...|||
T Consensus 481 -~etkfdm~~~idIAqQiaqGM~YLHAK~-IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmA 558 (678)
T KOG0193|consen 481 -QETKFDMNTTIDIAQQIAQGMDYLHAKN-IIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMA 558 (678)
T ss_pred -hhhhhhHHHHHHHHHHHHHhhhhhhhhh-hhhhhccccceEEccCCcEEEecccceeeeeeeccccccCCCccchhhhc
Confidence 3456889999999999999999999999 9999999999999999999999999975322 1123456789999
Q ss_pred ccccccC---CCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccc-cC---CCChhHHHHHHHHHHHhc
Q 014484 153 PEYMRTG---RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSAL-EG---HFSNDEGTELVRLASRCL 225 (423)
Q Consensus 153 PE~~~~~---~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~l~~li~~cl 225 (423)
||+++.+ +|++.+||||||||+|||+||..|+..+..+ .+.-++.... .. .....++.++.+|+..||
T Consensus 559 PEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~d-----qIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~ 633 (678)
T KOG0193|consen 559 PEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRD-----QIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCW 633 (678)
T ss_pred HHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChh-----heEEEecccccCccchhhhccCHHHHHHHHHHHH
Confidence 9998743 5999999999999999999999988754222 1112222221 11 123456789999999999
Q ss_pred ccCcCCCCCHHHHHHHHHhhhh
Q 014484 226 QSEARERPNAKSLVISLMSLQK 247 (423)
Q Consensus 226 ~~dp~~Rps~~~vl~~l~~~~~ 247 (423)
..++++||.+.+|+..|+.+..
T Consensus 634 ~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 634 KFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred hcCcccCccHHHHHHHHHHhhh
Confidence 9999999999999998887765
|
|
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-40 Score=309.48 Aligned_cols=237 Identities=13% Similarity=0.206 Sum_probs=191.3
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||.+.+. +..+++|++.... .....+..|+.++..+ +||||+++++++...+..|+||||++||+|.+
T Consensus 6 G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~g~L~~ 85 (329)
T cd05588 6 GSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSGGDLMF 85 (329)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCCCCHHH
Confidence 899999999874 6678888776432 2345678899999998 79999999999999999999999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCC----CCccccCccc
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNLAF 150 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~~t~~y 150 (423)
++.+ .+.+++..+..++.|++.||.|||+++ ++||||||+||+++.++.++|+|||+++.... .....||+.|
T Consensus 86 ~~~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y 162 (329)
T cd05588 86 HMQR--QRKLPEEHARFYSAEISLALNFLHERG-IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFCGTPNY 162 (329)
T ss_pred HHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHeEECCCCCEEECcCccccccccCCCccccccCCccc
Confidence 8853 457999999999999999999999999 99999999999999999999999999874321 2345689999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhh----chhhhhccccccCCCChhHHHHHHHHHHHhcc
Q 014484 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRS----KNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (423)
Q Consensus 151 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (423)
+|||++.+..++.++|+|||||++|+|++|..||.......... ......+.. .....+..++.++.+++.+||+
T Consensus 163 ~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~li~~~L~ 241 (329)
T cd05588 163 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILE-KQIRIPRSLSVKASSVLKGFLN 241 (329)
T ss_pred cCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHc-CCCCCCCCCCHHHHHHHHHHhc
Confidence 99999998899999999999999999999999885321110000 001111111 1123455667889999999999
Q ss_pred cCcCCCCC------HHHHHHHH
Q 014484 227 SEARERPN------AKSLVISL 242 (423)
Q Consensus 227 ~dp~~Rps------~~~vl~~l 242 (423)
.||.+|+| +++++.|-
T Consensus 242 ~dP~~R~~~~~~~~~~~i~~hp 263 (329)
T cd05588 242 KDPKERLGCHPQTGFRDIKSHP 263 (329)
T ss_pred cCHHHcCCCCCCCCHHHHhcCC
Confidence 99999987 67888774
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-39 Score=294.58 Aligned_cols=236 Identities=21% Similarity=0.299 Sum_probs=194.7
Q ss_pred CCCCccceeeeecceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEe-CCceeEEEecCCCCCHHhhhccCC
Q 014484 2 GGRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYE-ADERLLVAEFMPNETLAKHLFHWE 80 (423)
Q Consensus 2 G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~~~~~~L~~~i~~~~ 80 (423)
|+||.||++.+.+..+++|...... ..+.+.+|+.+++.++|+|++++++++.. ++..++||||+++++|.+++....
T Consensus 17 g~~~~v~~~~~~~~~~~~k~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~ 95 (256)
T cd05082 17 GEFGDVMLGDYRGNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRG 95 (256)
T ss_pred cCCCeEEEEEEcCCcEEEEEeCCCc-hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCCCCcHHHHHHhcC
Confidence 8899999998888888888775543 35678899999999999999999997654 456899999999999999997655
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC-ccccCcccCCccccccC
Q 014484 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-SYSTNLAFTPPEYMRTG 159 (423)
Q Consensus 81 ~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-~~~~t~~y~aPE~~~~~ 159 (423)
...+++..++.++.|++.||.|||+++ ++||||||+||++++++.++|+|||+++...... ...++..|+|||.+.+.
T Consensus 96 ~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~ 174 (256)
T cd05082 96 RSVLGGDCLLKFSLDVCEAMEYLEANN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREK 174 (256)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCC-EeccccchheEEEcCCCcEEecCCccceeccccCCCCccceeecCHHHHccC
Confidence 556899999999999999999999999 9999999999999999999999999987654332 23446689999999888
Q ss_pred CCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHH
Q 014484 160 RVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238 (423)
Q Consensus 160 ~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v 238 (423)
.++.++|||||||++|+|++ |..|+....... ....+........+..+++.+.+++.+||+.+|++|||+.++
T Consensus 175 ~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l 249 (256)
T cd05082 175 KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD-----VVPRVEKGYKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQL 249 (256)
T ss_pred CCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH-----HHHHHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHH
Confidence 89999999999999999998 887765432211 111111122233445667889999999999999999999999
Q ss_pred HHHHHh
Q 014484 239 VISLMS 244 (423)
Q Consensus 239 l~~l~~ 244 (423)
++.|..
T Consensus 250 ~~~l~~ 255 (256)
T cd05082 250 REQLEH 255 (256)
T ss_pred HHHHhc
Confidence 998875
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-39 Score=295.24 Aligned_cols=237 Identities=20% Similarity=0.257 Sum_probs=193.6
Q ss_pred CCCCccceeeee-----cceeeeeecCCCh--hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF-----HCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~-----~~~~~~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
||||.||++.+. ...+++|.+.... .....|.+|+.++..++||||+++++++..++..++||||+++++|.+
T Consensus 15 g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~ 94 (266)
T cd05033 15 GEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMIITEYMENGSLDK 94 (266)
T ss_pred CccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEEEEcCCCCCHHH
Confidence 899999999884 2356667665432 335678899999999999999999999999999999999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC------ccccCc
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK------SYSTNL 148 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~------~~~~t~ 148 (423)
++... .+.+++..+..++.|++.||.|||+++ ++||||||+||+++.++.++|+|||+++...... ...++.
T Consensus 95 ~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh~~~-i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~ 172 (266)
T cd05033 95 FLREN-DGKFTVGQLVGMLRGIASGMKYLSEMN-YVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPI 172 (266)
T ss_pred HHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCcceEEEcCCCCEEECccchhhcccccccceeccCCCCCc
Confidence 98643 347899999999999999999999999 9999999999999999999999999998764211 123456
Q ss_pred ccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhccc
Q 014484 149 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQS 227 (423)
Q Consensus 149 ~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 227 (423)
.|+|||.+.+..++.++||||||+++|+|++ |..|+...... .....+........+..++..+.+++.+||+.
T Consensus 173 ~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 247 (266)
T cd05033 173 RWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ-----DVIKAVEDGYRLPPPMDCPSALYQLMLDCWQK 247 (266)
T ss_pred cccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH-----HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCC
Confidence 8999999998889999999999999999998 88776543211 11122211222233445678899999999999
Q ss_pred CcCCCCCHHHHHHHHHhh
Q 014484 228 EARERPNAKSLVISLMSL 245 (423)
Q Consensus 228 dp~~Rps~~~vl~~l~~~ 245 (423)
+|++||++++++++|..+
T Consensus 248 ~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 248 DRNERPTFSQIVSTLDKM 265 (266)
T ss_pred CcccCcCHHHHHHHHHhh
Confidence 999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-39 Score=306.75 Aligned_cols=232 Identities=16% Similarity=0.222 Sum_probs=191.5
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||.+.+. +..+++|++.... .....+..|++++..+ +||||+++++++..++..|+||||++|++|..
T Consensus 6 G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~ 85 (321)
T cd05591 6 GSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNGGDLMF 85 (321)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCCCcHHH
Confidence 899999999885 5678888775432 2345677899998876 89999999999999999999999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccc
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAF 150 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y 150 (423)
++.. .+.+++..+..++.||+.||.|||+++ |+||||||+||+++.++.++|+|||+++..... ....||+.|
T Consensus 86 ~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y 162 (321)
T cd05591 86 QIQR--SRKFDEPRSRFYAAEVTLALMFLHRHG-VIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCGTPDY 162 (321)
T ss_pred HHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHeEECCCCCEEEeecccceecccCCccccccccCccc
Confidence 8853 457899999999999999999999999 999999999999999999999999998754322 234589999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcC
Q 014484 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (423)
Q Consensus 151 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (423)
+|||++.+..++.++|||||||++|+|++|..||........ ....... ...++..++.++.+++.+||+.||+
T Consensus 163 ~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~----~~~i~~~--~~~~p~~~~~~~~~ll~~~L~~dp~ 236 (321)
T cd05591 163 IAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDL----FESILHD--DVLYPVWLSKEAVSILKAFMTKNPN 236 (321)
T ss_pred cCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHH----HHHHHcC--CCCCCCCCCHHHHHHHHHHhccCHH
Confidence 999999988999999999999999999999999876432211 1111111 1123444678899999999999999
Q ss_pred CCC-------CHHHHHHHH
Q 014484 231 ERP-------NAKSLVISL 242 (423)
Q Consensus 231 ~Rp-------s~~~vl~~l 242 (423)
+|| ++++++.|.
T Consensus 237 ~R~~~~~~~~~~~~~~~hp 255 (321)
T cd05591 237 KRLGCVASQGGEDAIKQHP 255 (321)
T ss_pred HcCCCCCCCCCHHHHhcCC
Confidence 999 888898774
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-39 Score=293.83 Aligned_cols=236 Identities=18% Similarity=0.249 Sum_probs=191.2
Q ss_pred CCCCccceeeee----cceeeeeecCCCh--hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF----HCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~----~~~~~~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.+. +..+++|++.... ...+.+.+|+.++++++||||+++++++.. ...++||||+++++|.++
T Consensus 6 G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~~~L~~~ 84 (257)
T cd05115 6 GNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASGGPLNKF 84 (257)
T ss_pred CCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCCCCHHHH
Confidence 899999998874 3457777765543 234678899999999999999999999864 468999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCCc-------cccCc
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS-------YSTNL 148 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-------~~~t~ 148 (423)
+.. ....+++..+++++.|++.||.|||+++ ++||||||+||+++.++.++|+|||+++....... ..++.
T Consensus 85 l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~ 162 (257)
T cd05115 85 LSG-KKDEITVSNVVELMHQVSMGMKYLEGKN-FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWPL 162 (257)
T ss_pred HHh-CCCCCCHHHHHHHHHHHHHHHHHHHhcC-eeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCCCCCc
Confidence 853 3456899999999999999999999999 99999999999999999999999999875443211 12356
Q ss_pred ccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhccc
Q 014484 149 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQS 227 (423)
Q Consensus 149 ~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 227 (423)
.|+|||.+.+..++.++|||||||++|++++ |..||..... ......+........+..+++++.+++.+||..
T Consensus 163 ~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~ 237 (257)
T cd05115 163 KWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKG-----PEVMSFIEQGKRLDCPAECPPEMYALMKDCWIY 237 (257)
T ss_pred ccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCH-----HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCC
Confidence 8999999988889999999999999999996 8877754321 112222222233345566788999999999999
Q ss_pred CcCCCCCHHHHHHHHHhh
Q 014484 228 EARERPNAKSLVISLMSL 245 (423)
Q Consensus 228 dp~~Rps~~~vl~~l~~~ 245 (423)
||++||++.+|.+.|...
T Consensus 238 ~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 238 KWEDRPNFAKVEERMRTY 255 (257)
T ss_pred ChhhCcCHHHHHHHHhhh
Confidence 999999999999988753
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-39 Score=306.12 Aligned_cols=240 Identities=17% Similarity=0.269 Sum_probs=190.5
Q ss_pred CCCCccceeeee--cceeeeeecCCC--hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~ 77 (423)
|+||.||.+.+. +..+++|.+... ......+.+|+++++.++||||++++++|..++..++||||+++++|.+++.
T Consensus 16 g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~ 95 (333)
T cd06650 16 GNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK 95 (333)
T ss_pred CCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEecCCCCcHHHHHH
Confidence 899999999885 555666665433 2345678899999999999999999999999999999999999999999996
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHcC-CCeeeccCCCCCeeecCCCCeEEccccccccCCCC--CccccCcccCCcc
Q 014484 78 HWETQPMKWAMRLRVALYLAQALEYCSSK-GRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTNLAFTPPE 154 (423)
Q Consensus 78 ~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--~~~~~t~~y~aPE 154 (423)
. .+.+++..+..++.|++.||.|||++ + ++|+||||+||+++.++.++|+|||++...... ....++..|+|||
T Consensus 96 ~--~~~~~~~~~~~~~~~l~~~l~~lH~~~~-ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~y~aPE 172 (333)
T cd06650 96 K--AGRIPEQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPE 172 (333)
T ss_pred H--cCCCCHHHHHHHHHHHHHHHHHHHhcCC-EEecCCChhhEEEcCCCCEEEeeCCcchhhhhhccccCCCCccccCHH
Confidence 4 45689999999999999999999985 6 999999999999999999999999998755332 3456889999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhc---------------------------------------
Q 014484 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSK--------------------------------------- 195 (423)
Q Consensus 155 ~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~--------------------------------------- 195 (423)
.+.+..++.++|+|||||++|+|++|..||...........
T Consensus 173 ~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (333)
T cd06650 173 RLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIF 252 (333)
T ss_pred HhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhcccccccccHH
Confidence 99988899999999999999999999988764321111000
Q ss_pred hhhhhccccccCCCC-hhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHh
Q 014484 196 NFLLLMDSALEGHFS-NDEGTELVRLASRCLQSEARERPNAKSLVISLMS 244 (423)
Q Consensus 196 ~~~~~~~~~~~~~~~-~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~ 244 (423)
.....+........+ ...+.++.+|+.+||++||++|||+++++.|..-
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~ 302 (333)
T cd06650 253 ELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFI 302 (333)
T ss_pred HHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHH
Confidence 000000000000111 1245789999999999999999999999988554
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-40 Score=277.97 Aligned_cols=236 Identities=19% Similarity=0.200 Sum_probs=203.6
Q ss_pred CCCCccceeeee--cceeeeeecCCChhh----HHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLG----ETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|-||.||.+... ..-+++|++.++... ...+.+|+++-+.|+||||.++|++|.+....|+++||.++|+|...
T Consensus 33 gkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLilEya~~gel~k~ 112 (281)
T KOG0580|consen 33 GKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLILEYAPRGELYKD 112 (281)
T ss_pred CccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEEEecCCchHHHH
Confidence 779999999985 556778887666543 34678999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCC--CCCccccCcccCCc
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSR--DGKSYSTNLAFTPP 153 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~--~~~~~~~t~~y~aP 153 (423)
++......+++...+.++.|++.|+.|+|.++ ||||||||+|+|++..|.+|++|||-+.... ...+.+||..|.+|
T Consensus 113 L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~-VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~kR~tlcgt~dyl~p 191 (281)
T KOG0580|consen 113 LQEGRMKRFDEQRAATYIKQLANALLYCHLKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSNKRKTLCGTLDYLPP 191 (281)
T ss_pred HHhcccccccccchhHHHHHHHHHHHHhccCC-cccCCCCHHHhccCCCCCeeccCCCceeecCCCCceeeecccccCCH
Confidence 98666778999999999999999999999999 9999999999999999999999999887554 33567899999999
Q ss_pred cccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCC
Q 014484 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERP 233 (423)
Q Consensus 154 E~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 233 (423)
|...+...+...|+|++|++.||++.|.+||.....+..- ..+. ...-.+|..++.++.++|.+|+.++|.+|.
T Consensus 192 Emv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etY----krI~--k~~~~~p~~is~~a~dlI~~ll~~~p~~r~ 265 (281)
T KOG0580|consen 192 EMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETY----KRIR--KVDLKFPSTISGGAADLISRLLVKNPIERL 265 (281)
T ss_pred hhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHH----HHHH--HccccCCcccChhHHHHHHHHhccCccccc
Confidence 9999999999999999999999999999999876432221 1111 122235577888999999999999999999
Q ss_pred CHHHHHHHHHh
Q 014484 234 NAKSLVISLMS 244 (423)
Q Consensus 234 s~~~vl~~l~~ 244 (423)
+..+++.|-+-
T Consensus 266 ~l~~v~~hpwI 276 (281)
T KOG0580|consen 266 ALTEVMDHPWI 276 (281)
T ss_pred cHHHHhhhHHH
Confidence 99999998653
|
|
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-39 Score=294.71 Aligned_cols=235 Identities=22% Similarity=0.314 Sum_probs=191.5
Q ss_pred CCCCccceeeeecc-eeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccCC
Q 014484 2 GGRCSKFSICWFHC-HLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80 (423)
Q Consensus 2 G~~g~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~ 80 (423)
|+||.||.+.+.+. .+++|.+.........+.+|+.++..++||||+++++++......++||||+.+++|.+++...
T Consensus 15 G~~~~vy~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~- 93 (256)
T cd05113 15 GQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREH- 93 (256)
T ss_pred cccceEEEEEecCCCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCCCcHHHHHHhc-
Confidence 88999999987643 4777777665555678999999999999999999999999998899999999999999998643
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC-----ccccCcccCCccc
Q 014484 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-----SYSTNLAFTPPEY 155 (423)
Q Consensus 81 ~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-----~~~~t~~y~aPE~ 155 (423)
...+++..++.++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||.++...... ...++..|+|||.
T Consensus 94 ~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~~pe~ 172 (256)
T cd05113 94 GKRFQPSQLLEMCKDVCEGMAYLESKQ-FIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEV 172 (256)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccccCcceEEEcCCCCEEECCCccceecCCCceeecCCCccChhhCCHHH
Confidence 336899999999999999999999999 9999999999999999999999999987554322 1234567999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCC
Q 014484 156 MRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (423)
Q Consensus 156 ~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (423)
+.+..++.++|||||||++|+|++ |..||........ ............+...+..+.+++.+||+.||.+||+
T Consensus 173 ~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~ 247 (256)
T cd05113 173 LLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSET-----VEKVSQGLRLYRPHLASEKVYAIMYSCWHEKAEERPT 247 (256)
T ss_pred HhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHH-----HHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCCC
Confidence 988889999999999999999998 8777654321111 1111111122223345678999999999999999999
Q ss_pred HHHHHHHHH
Q 014484 235 AKSLVISLM 243 (423)
Q Consensus 235 ~~~vl~~l~ 243 (423)
+.+++..++
T Consensus 248 ~~~ll~~~~ 256 (256)
T cd05113 248 FQQLLSSIE 256 (256)
T ss_pred HHHHHHhhC
Confidence 999998763
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-39 Score=305.58 Aligned_cols=231 Identities=17% Similarity=0.245 Sum_probs=188.3
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||++.+. +..+++|++.... .....+..|..++..+ +||||+++++++..++..++||||++||+|..
T Consensus 6 G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg~L~~ 85 (316)
T cd05592 6 GSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNGGDLMF 85 (316)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCCcHHH
Confidence 899999999885 5568888775432 2344556677777655 89999999999999999999999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccc
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAF 150 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y 150 (423)
++.. ...+++..+..++.|++.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....||+.|
T Consensus 86 ~~~~--~~~~~~~~~~~~~~qi~~al~~LH~~~-ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y 162 (316)
T cd05592 86 HIQS--SGRFDEARARFYAAEIICGLQFLHKKG-IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCGTPDY 162 (316)
T ss_pred HHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccccccCCccc
Confidence 8854 456999999999999999999999999 999999999999999999999999998754322 335689999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcC
Q 014484 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (423)
Q Consensus 151 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (423)
+|||.+.+..++.++|||||||++|+|++|..||......... ..+.. ....++..++.++.+++.+||+.||.
T Consensus 163 ~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~----~~i~~--~~~~~~~~~~~~~~~ll~~~l~~~P~ 236 (316)
T cd05592 163 IAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELF----DSILN--DRPHFPRWISKEAKDCLSKLFERDPT 236 (316)
T ss_pred cCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHH----HHHHc--CCCCCCCCCCHHHHHHHHHHccCCHH
Confidence 9999999888999999999999999999999998764322111 11111 12234555678899999999999999
Q ss_pred CCCCHH-HHHHH
Q 014484 231 ERPNAK-SLVIS 241 (423)
Q Consensus 231 ~Rps~~-~vl~~ 241 (423)
+||++. +++.|
T Consensus 237 ~R~~~~~~l~~h 248 (316)
T cd05592 237 KRLGVDGDIRQH 248 (316)
T ss_pred HcCCChHHHHcC
Confidence 999875 56554
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=307.17 Aligned_cols=232 Identities=17% Similarity=0.233 Sum_probs=190.6
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||.+.+. +..+++|++.... .....+..|+.++..+ +||||+++++++...+..|+||||++||+|.+
T Consensus 6 G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g~L~~ 85 (320)
T cd05590 6 GSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGGDLMF 85 (320)
T ss_pred CCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCCchHHH
Confidence 899999999875 5678888775432 2345677889988877 79999999999999999999999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCC----CCccccCccc
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNLAF 150 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~~t~~y 150 (423)
++.. .+.+++..+..++.|++.||.|||+++ ++||||||+|||++.++.++|+|||+++.... .....||+.|
T Consensus 86 ~i~~--~~~l~~~~~~~~~~ql~~~L~~lH~~~-ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y 162 (320)
T cd05590 86 HIQK--SRRFDEARARFYAAEITSALMFLHDKG-IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCGTPDY 162 (320)
T ss_pred HHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcccccccCccc
Confidence 8854 457999999999999999999999999 99999999999999999999999999875322 2335689999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcC
Q 014484 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (423)
Q Consensus 151 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (423)
+|||.+.+..++.++|||||||++|+|++|..||......... ...... ...++..++.++.+++.+||+.||.
T Consensus 163 ~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~----~~i~~~--~~~~~~~~~~~~~~li~~~L~~dP~ 236 (320)
T cd05590 163 IAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLF----EAILND--EVVYPTWLSQDAVDILKAFMTKNPT 236 (320)
T ss_pred cCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHH----HHHhcC--CCCCCCCCCHHHHHHHHHHcccCHH
Confidence 9999999888999999999999999999999998764322111 111111 1123445678899999999999999
Q ss_pred CCCCH------HHHHHHH
Q 014484 231 ERPNA------KSLVISL 242 (423)
Q Consensus 231 ~Rps~------~~vl~~l 242 (423)
+||++ ++++.|.
T Consensus 237 ~R~~~~~~~~~~~~~~h~ 254 (320)
T cd05590 237 MRLGSLTLGGEEAILRHP 254 (320)
T ss_pred HCCCCCCCCCHHHHHcCC
Confidence 99998 6777663
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-39 Score=298.68 Aligned_cols=241 Identities=21% Similarity=0.275 Sum_probs=194.9
Q ss_pred CCCCccceeeeec-------ceeeeeecCCChh-hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHH
Q 014484 2 GGRCSKFSICWFH-------CHLKSSVLESSDL-GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLA 73 (423)
Q Consensus 2 G~~g~v~~~~~~~-------~~~~~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 73 (423)
|+||.||.+.+.+ ..++++.+..... ....+.+|+.++..++||||+++++++..++..++||||+++++|.
T Consensus 16 g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 95 (291)
T cd05094 16 GAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLN 95 (291)
T ss_pred cCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEEEecCCCCcHH
Confidence 8999999987642 3356666554433 3467889999999999999999999999999999999999999999
Q ss_pred hhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCC
Q 014484 74 KHLFHWE--------------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSR 139 (423)
Q Consensus 74 ~~i~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 139 (423)
+++.... ...+++..++.++.||+.||.|||+++ ++||||||+||+++.++.++|+|||++....
T Consensus 96 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~-i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~ 174 (291)
T cd05094 96 KFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH-FVHRDLATRNCLVGANLLVKIGDFGMSRDVY 174 (291)
T ss_pred HHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccCcceEEEccCCcEEECCCCcccccC
Confidence 9986421 234889999999999999999999999 9999999999999999999999999987554
Q ss_pred CC------CccccCcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChh
Q 014484 140 DG------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 212 (423)
Q Consensus 140 ~~------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (423)
.. ....++..|+|||.+.+..++.++|||||||++|+|+| |..|+....... .............+..
T Consensus 175 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~ 249 (291)
T cd05094 175 STDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE-----VIECITQGRVLERPRV 249 (291)
T ss_pred CCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-----HHHHHhCCCCCCCCcc
Confidence 32 22335678999999998889999999999999999999 887765432111 1111122222223445
Q ss_pred HHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhhh
Q 014484 213 EGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 213 ~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~~~~ 248 (423)
.+..+.+++.+||+.||.+|||+.++++.|..+...
T Consensus 250 ~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 250 CPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred CCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 677899999999999999999999999999988664
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=306.30 Aligned_cols=231 Identities=16% Similarity=0.193 Sum_probs=189.0
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||.+.+. +..+++|++.... .....+..|..++..+ +||||+++++++.+++..|+||||+.|++|..
T Consensus 6 G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~ 85 (316)
T cd05620 6 GSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNGGDLMF 85 (316)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCCCcHHH
Confidence 899999999885 5677888775432 2345567788888765 89999999999999999999999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCC----CCccccCccc
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNLAF 150 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~~t~~y 150 (423)
++.. ...+++..+..++.|++.||.|||+++ |+||||||+||+++.++.++|+|||+++.... .....||+.|
T Consensus 86 ~i~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y 162 (316)
T cd05620 86 HIQD--KGRFDLYRATFYAAEIVCGLQFLHSKG-IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCGTPDY 162 (316)
T ss_pred HHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceeccCCCcCc
Confidence 8854 457899999999999999999999999 99999999999999999999999999874321 2345689999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcC
Q 014484 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (423)
Q Consensus 151 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (423)
+|||++.+..++.++|||||||++|+|++|..||......... ..... ....++..++.++.+++.+||+.||.
T Consensus 163 ~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~----~~~~~--~~~~~~~~~~~~~~~li~~~l~~dP~ 236 (316)
T cd05620 163 IAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELF----ESIRV--DTPHYPRWITKESKDILEKLFERDPT 236 (316)
T ss_pred cCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHH----HHHHh--CCCCCCCCCCHHHHHHHHHHccCCHH
Confidence 9999999889999999999999999999999998754322111 11111 11233445678899999999999999
Q ss_pred CCCCH-HHHHHH
Q 014484 231 ERPNA-KSLVIS 241 (423)
Q Consensus 231 ~Rps~-~~vl~~ 241 (423)
+||++ +++++|
T Consensus 237 ~R~~~~~~~~~h 248 (316)
T cd05620 237 RRLGVVGNIRGH 248 (316)
T ss_pred HcCCChHHHHcC
Confidence 99998 466655
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-40 Score=313.22 Aligned_cols=230 Identities=19% Similarity=0.273 Sum_probs=197.1
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.|+.+... +.-+|+|++++.. .+.+....|-+++... +||.+++++..|.+.+++|+||||+.||++..
T Consensus 379 GsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fvmey~~Ggdm~~ 458 (694)
T KOG0694|consen 379 GSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFVMEYVAGGDLMH 458 (694)
T ss_pred CcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEEEEEecCCCcEEE
Confidence 899999999985 5678888887754 3566778899988888 59999999999999999999999999999655
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCC----CCCccccCccc
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSR----DGKSYSTNLAF 150 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~----~~~~~~~t~~y 150 (423)
++ ..+.+++..+.-++..|+.||+|||++| ||+||||.+|||+|..|++||+|||+++... ..++++||+.|
T Consensus 459 ~~---~~~~F~e~rarfyaAev~l~L~fLH~~~-IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g~~TsTfCGTpey 534 (694)
T KOG0694|consen 459 HI---HTDVFSEPRARFYAAEVVLGLQFLHENG-IIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQGDRTSTFCGTPEF 534 (694)
T ss_pred EE---ecccccHHHHHHHHHHHHHHHHHHHhcC-ceeeecchhheEEcccCcEEecccccccccCCCCCccccccCChhh
Confidence 54 3467999999999999999999999999 9999999999999999999999999998654 34678999999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcC
Q 014484 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (423)
Q Consensus 151 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (423)
||||++.+..|+...|+|||||++|||+.|..||+++..+. .+..++. ....+|..++.+..++++++|+++|.
T Consensus 535 ~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee----~FdsI~~--d~~~yP~~ls~ea~~il~~ll~k~p~ 608 (694)
T KOG0694|consen 535 LAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEE----VFDSIVN--DEVRYPRFLSKEAIAIMRRLLRKNPE 608 (694)
T ss_pred cChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHH----HHHHHhc--CCCCCCCcccHHHHHHHHHHhccCcc
Confidence 99999999999999999999999999999999999763332 2222222 22346777899999999999999999
Q ss_pred CCCC-----HHHHHHH
Q 014484 231 ERPN-----AKSLVIS 241 (423)
Q Consensus 231 ~Rps-----~~~vl~~ 241 (423)
+|.- +++|..|
T Consensus 609 kRLG~~e~d~~~i~~h 624 (694)
T KOG0694|consen 609 KRLGSGERDAEDIKKH 624 (694)
T ss_pred cccCCCCCCchhhhhC
Confidence 9953 5666655
|
|
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-39 Score=313.19 Aligned_cols=235 Identities=19% Similarity=0.196 Sum_probs=188.9
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||++.+. +..+++|++.... .....+.+|++++..++||||+++++++.+.+..++||||++||+|.++
T Consensus 12 G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~ 91 (381)
T cd05626 12 GAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSL 91 (381)
T ss_pred cCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEecCCCCcHHHH
Confidence 899999999874 5678888775432 2345688999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCC---------------
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD--------------- 140 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~--------------- 140 (423)
+.+ ...+++..+..++.||+.||.|||+++ |+||||||+|||++.+++++|+|||+++....
T Consensus 92 l~~--~~~~~e~~~~~~~~qi~~aL~~LH~~g-ivHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~ 168 (381)
T cd05626 92 LIR--MEVFPEVLARFYIAELTLAIESVHKMG-FIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQ 168 (381)
T ss_pred HHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecCCcHHHEEECCCCCEEEeeCcCCcccccccccccccccccccc
Confidence 864 456899999999999999999999999 99999999999999999999999998753210
Q ss_pred ------------------------------------CCccccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCC
Q 014484 141 ------------------------------------GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184 (423)
Q Consensus 141 ------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~ 184 (423)
..+..||+.|+|||.+.+..++.++|||||||++|||++|..||
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf 248 (381)
T cd05626 169 DSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPF 248 (381)
T ss_pred cccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHHHHhCCCCC
Confidence 01246899999999999888999999999999999999999998
Q ss_pred CchhhHHhhhchhhhhccc--cccCCCChhHHHHHHHHHHHhc--ccCcCCCCCHHHHHHHHH
Q 014484 185 PSHALDLIRSKNFLLLMDS--ALEGHFSNDEGTELVRLASRCL--QSEARERPNAKSLVISLM 243 (423)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~cl--~~dp~~Rps~~~vl~~l~ 243 (423)
........ ....... .........+++++.++|.+|+ ..+|..||++++++.|-.
T Consensus 249 ~~~~~~~~----~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~ 307 (381)
T cd05626 249 LAPTPTET----QLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPF 307 (381)
T ss_pred cCCCHHHH----HHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcc
Confidence 65422111 1111111 1111112245788999999954 556666999999998853
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-39 Score=298.16 Aligned_cols=236 Identities=20% Similarity=0.279 Sum_probs=192.6
Q ss_pred CCCCccceeeeec-------ceeeeeecCCChh--hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICWFH-------CHLKSSVLESSDL--GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~~~-------~~~~~~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 72 (423)
|+||.||.+.+.. ..+++|.+..... ....+.+|++++..++|+||+++++++..+...++||||+++++|
T Consensus 16 g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 95 (280)
T cd05049 16 GAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPIMVFEYMEHGDL 95 (280)
T ss_pred cCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeEEEEecCCCCCH
Confidence 8999999997642 4577777654432 357889999999999999999999999999999999999999999
Q ss_pred HhhhccCC------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCC
Q 014484 73 AKHLFHWE------------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD 140 (423)
Q Consensus 73 ~~~i~~~~------------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 140 (423)
.+++.... ...+++..+..++.|++.|+.+||+++ ++||||||+||+++.++.++|+|||+++....
T Consensus 96 ~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~-i~h~dlkp~nili~~~~~~kl~d~g~~~~~~~ 174 (280)
T cd05049 96 NKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQH-FVHRDLATRNCLVGYDLVVKIGDFGMSRDVYT 174 (280)
T ss_pred HHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC-eeccccccceEEEcCCCeEEECCcccceeccc
Confidence 99996421 235788999999999999999999999 99999999999999999999999999875432
Q ss_pred C------CccccCcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhH
Q 014484 141 G------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDE 213 (423)
Q Consensus 141 ~------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (423)
. ....+++.|+|||.+.+..++.++|||||||++|+|++ |..||....... .............+..+
T Consensus 175 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~ 249 (280)
T cd05049 175 TDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEE-----VIECITQGRLLQRPRTC 249 (280)
T ss_pred CcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHH-----HHHHHHcCCcCCCCCCC
Confidence 2 22334678999999998899999999999999999998 888876532211 11111122222334456
Q ss_pred HHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 214 GTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 214 ~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
+..+.+++.+||+.||++||++.++++.|.
T Consensus 250 ~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 250 PSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred CHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 788999999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-39 Score=302.24 Aligned_cols=236 Identities=16% Similarity=0.189 Sum_probs=188.1
Q ss_pred CCCCccceeeee--cceeeeeecCCCh---hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
|+||.||.+.+. +..+++|++.... .....+.+|+.+++.++||||+++++++..++..++||||++++++..+.
T Consensus 12 g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~ 91 (287)
T cd07848 12 GAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEYVEKNMLELLE 91 (287)
T ss_pred cCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEecCCCCHHHHHH
Confidence 899999999885 5667777765432 23557789999999999999999999999999999999999997776554
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-----CccccCcccC
Q 014484 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYSTNLAFT 151 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~~t~~y~ 151 (423)
. ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||+++..... ....+++.|+
T Consensus 92 ~--~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~ 168 (287)
T cd07848 92 E--MPNGVPPEKVRSYIYQLIKAIHWCHKND-IVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTEYVATRWYR 168 (287)
T ss_pred h--cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCcEEEeeccCcccccccccccccccccccccC
Confidence 3 2456999999999999999999999999 999999999999999999999999998865432 2345789999
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhc-------------cc--------cc-----
Q 014484 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLM-------------DS--------AL----- 205 (423)
Q Consensus 152 aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~-------------~~--------~~----- 205 (423)
|||++.+..++.++|||||||++|+|++|.+||+......... ...... .+ ..
T Consensus 169 aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (287)
T cd07848 169 SPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLF-TIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQS 247 (287)
T ss_pred CcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHH-HHHHhhCCCCHHHHHhhhccchhcccccCcccCccc
Confidence 9999998889999999999999999999998887542111000 000000 00 00
Q ss_pred -cCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014484 206 -EGHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (423)
Q Consensus 206 -~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~ 241 (423)
........+.++.+++.+||+.||++|||++++++|
T Consensus 248 ~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h 284 (287)
T cd07848 248 LERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH 284 (287)
T ss_pred HHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 000112256789999999999999999999999976
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-39 Score=307.17 Aligned_cols=237 Identities=13% Similarity=0.193 Sum_probs=190.3
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||.+.+. +..+++|++.... .....+.+|+.++.++ +||||+++++++..++..++||||+++++|..
T Consensus 6 G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~~~L~~ 85 (329)
T cd05618 6 GSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMF 85 (329)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCCCCHHH
Confidence 899999999874 5667777775432 2345677899988877 89999999999999999999999999999998
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCC----CCccccCccc
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNLAF 150 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~~t~~y 150 (423)
++.+ .+.+++..+..++.|++.||.|||+++ |+||||||+||+++.++.++|+|||+++.... .....||+.|
T Consensus 86 ~~~~--~~~l~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y 162 (329)
T cd05618 86 HMQR--QRKLPEEHARFYSAEISLALNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNY 162 (329)
T ss_pred HHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccccccCCccc
Confidence 8853 457999999999999999999999999 99999999999999999999999999875322 2335689999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhh----chhhhhccccccCCCChhHHHHHHHHHHHhcc
Q 014484 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRS----KNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (423)
Q Consensus 151 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (423)
+|||.+.+..++.++|||||||++|+|++|..||.......... ......+. .....+|...+.++.+++.+||+
T Consensus 163 ~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~-~~~~~~p~~~~~~~~~ll~~~L~ 241 (329)
T cd05618 163 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVIL-EKQIRIPRSLSVKAASVLKSFLN 241 (329)
T ss_pred cCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHh-cCCCCCCCCCCHHHHHHHHHHhc
Confidence 99999998899999999999999999999999885311110000 00111111 11223556677889999999999
Q ss_pred cCcCCCCC------HHHHHHHH
Q 014484 227 SEARERPN------AKSLVISL 242 (423)
Q Consensus 227 ~dp~~Rps------~~~vl~~l 242 (423)
.||.+||+ +.++++|-
T Consensus 242 ~dP~~R~~~~~~~~~~~i~~hp 263 (329)
T cd05618 242 KDPKERLGCHPQTGFADIQGHP 263 (329)
T ss_pred CCHHHcCCCCCCCCHHHHhcCC
Confidence 99999998 47887763
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-39 Score=328.84 Aligned_cols=243 Identities=22% Similarity=0.319 Sum_probs=204.1
Q ss_pred CCCCCccceeeeec-------ceeeeeecCCC--hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCC
Q 014484 1 MGGRCSKFSICWFH-------CHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNET 71 (423)
Q Consensus 1 ~G~~g~v~~~~~~~-------~~~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 71 (423)
+|.||.||.+.+.+ ..+++|.+... .+....|++|..+|+.++|||||+++|+|.+....+|++|||+||+
T Consensus 702 ~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~leyM~gGD 781 (1025)
T KOG1095|consen 702 KGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLILLEYMEGGD 781 (1025)
T ss_pred cccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEEEehhcccCc
Confidence 69999999999852 23666666554 5678899999999999999999999999999999999999999999
Q ss_pred HHhhhccC-----CCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCCcc--
Q 014484 72 LAKHLFHW-----ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY-- 144 (423)
Q Consensus 72 L~~~i~~~-----~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~-- 144 (423)
|..||++. ....++....+.++.+|++|+.||++++ +|||||-..|+||+....+||+|||+|+.+......
T Consensus 782 L~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~-fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy~~~yyr~ 860 (1025)
T KOG1095|consen 782 LLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKH-FVHRDLAARNCLLDERRVVKIADFGLARDIYDKDYYRK 860 (1025)
T ss_pred HHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCC-CcCcchhhhheeecccCcEEEcccchhHhhhhchheec
Confidence 99999863 1456899999999999999999999999 999999999999999999999999999955433221
Q ss_pred ----ccCcccCCccccccCCCCCCcceehhHHHHHHHhhCC-CCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHH
Q 014484 145 ----STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGK-HIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVR 219 (423)
Q Consensus 145 ----~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 219 (423)
.-...|||||.+..+.++.|+|||||||++||++|.. .|++.. .+..+...+...-+-..|..+|..+.+
T Consensus 861 ~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~-----~n~~v~~~~~~ggRL~~P~~CP~~ly~ 935 (1025)
T KOG1095|consen 861 HGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSR-----SNFEVLLDVLEGGRLDPPSYCPEKLYQ 935 (1025)
T ss_pred cCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCc-----chHHHHHHHHhCCccCCCCCCChHHHH
Confidence 2246899999999999999999999999999999954 566553 333333322222255667788999999
Q ss_pred HHHHhcccCcCCCCCHHHHHHHHHhhhhhc
Q 014484 220 LASRCLQSEARERPNAKSLVISLMSLQKEA 249 (423)
Q Consensus 220 li~~cl~~dp~~Rps~~~vl~~l~~~~~~~ 249 (423)
++..||+.+|++||++..+++.+..+....
T Consensus 936 lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~ 965 (1025)
T KOG1095|consen 936 LMLQCWKHDPEDRPSFRTIVEQDPAISNAA 965 (1025)
T ss_pred HHHHHccCChhhCccHHHHHhhhhhhhhhh
Confidence 999999999999999999999887776554
|
|
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=312.71 Aligned_cols=234 Identities=15% Similarity=0.133 Sum_probs=190.7
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.+. +..+++|++.... .....+.+|+.++..++||||+++++++.+++..++||||++||+|.++
T Consensus 12 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~ 91 (364)
T cd05599 12 GAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIMEYLPGGDMMTL 91 (364)
T ss_pred cCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEECCCCCcHHHHH
Confidence 899999999884 6778888876432 2344677899999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC--------------
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-------------- 141 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-------------- 141 (423)
+.. .+.+++..+..++.|++.||.|||+++ |+||||||+|||++.++.++|+|||+++.....
T Consensus 92 l~~--~~~l~~~~~~~~~~qi~~aL~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~ 168 (364)
T cd05599 92 LMK--KDTFTEEETRFYIAETILAIDSIHKLG-YIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALP 168 (364)
T ss_pred HHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCCHHHeEECCCCCEEEeecccceecccccccccccccccccc
Confidence 864 456999999999999999999999999 999999999999999999999999998643211
Q ss_pred ----------------------------CccccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhh
Q 014484 142 ----------------------------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIR 193 (423)
Q Consensus 142 ----------------------------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~ 193 (423)
....||+.|+|||++.+..++.++|||||||++|+|++|..||........
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~- 247 (364)
T cd05599 169 SNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQET- 247 (364)
T ss_pred ccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCCCCCHHHH-
Confidence 123589999999999988899999999999999999999999876422111
Q ss_pred hchhhhhccccccCCCC--hhHHHHHHHHHHHhcccCcCCCCC---HHHHHHHHH
Q 014484 194 SKNFLLLMDSALEGHFS--NDEGTELVRLASRCLQSEARERPN---AKSLVISLM 243 (423)
Q Consensus 194 ~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~cl~~dp~~Rps---~~~vl~~l~ 243 (423)
............++ ..+++++.++|.+||. +|.+|++ +++++.|..
T Consensus 248 ---~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~ 298 (364)
T cd05599 248 ---YRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPF 298 (364)
T ss_pred ---HHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCC
Confidence 11111111111111 2357789999999997 9999987 999998753
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-40 Score=308.40 Aligned_cols=242 Identities=18% Similarity=0.287 Sum_probs=216.7
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW 79 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~ 79 (423)
|-||.||.++|. ...+++|.++.+....+.|+.|..+|+.+.|||+|+++|+|.....+|||+|||..|+|-+|+++.
T Consensus 278 GQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~yGNLLdYLRec 357 (1157)
T KOG4278|consen 278 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCYGNLLDYLREC 357 (1157)
T ss_pred CcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccCccHHHHHHHh
Confidence 557999999995 788999999888889999999999999999999999999999999999999999999999999987
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC--Ccccc---CcccCCcc
Q 014484 80 ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYST---NLAFTPPE 154 (423)
Q Consensus 80 ~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--~~~~~---t~~y~aPE 154 (423)
....++.-..+.++.||.+|++||..++ +|||||-..|+|+..+..+|++|||+++.+... ..+.| .+-|+|||
T Consensus 358 nr~ev~avvLlyMAtQIsSaMeYLEkkn-FIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAGAKFPIKWTAPE 436 (1157)
T KOG4278|consen 358 NRSEVPAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 436 (1157)
T ss_pred chhhcchhHHHHHHHHHHHHHHHHHHhh-hhhhhhhhhhccccccceEEeeccchhhhhcCCceecccCccCcccccCcc
Confidence 7777888889999999999999999999 999999999999999999999999999977643 23344 56799999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCC
Q 014484 155 YMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERP 233 (423)
Q Consensus 155 ~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 233 (423)
-+....++.|+|||+||++|||+.| |..|+++ +....+..++....+..-|..|++.+.+|++.||++.|.+||
T Consensus 437 sLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPG-----idlSqVY~LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRP 511 (1157)
T KOG4278|consen 437 SLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPG-----IDLSQVYGLLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRP 511 (1157)
T ss_pred cccccccccchhhHHHHHHHHHHHhcCCCCCCC-----ccHHHHHHHHhccccccCCCCCCHHHHHHHHHHhcCCcccCc
Confidence 9999999999999999999999988 5577777 344556677777888888999999999999999999999999
Q ss_pred CHHHHHHHHHhhhhhc
Q 014484 234 NAKSLVISLMSLQKEA 249 (423)
Q Consensus 234 s~~~vl~~l~~~~~~~ 249 (423)
++.|+.+.++.+-...
T Consensus 512 sFaeiHqafEtmf~~s 527 (1157)
T KOG4278|consen 512 SFAEIHQAFETMFSSS 527 (1157)
T ss_pred cHHHHHHHHHHHhccc
Confidence 9999999987765443
|
|
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-39 Score=297.40 Aligned_cols=237 Identities=19% Similarity=0.259 Sum_probs=190.6
Q ss_pred CCCCccceeeee------cceeeeeecCCCh--hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHH
Q 014484 2 GGRCSKFSICWF------HCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLA 73 (423)
Q Consensus 2 G~~g~v~~~~~~------~~~~~~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 73 (423)
|+||.||++.+. +..+++|.+.... .....+.+|+.+++.++||||+++++++..+...|+||||+++++|.
T Consensus 16 g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 95 (283)
T cd05090 16 CAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCMLFEYLNQGDLH 95 (283)
T ss_pred cCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEEEEEcCCCCcHH
Confidence 899999999862 3456666664322 33467889999999999999999999999999999999999999999
Q ss_pred hhhccCC---------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccC
Q 014484 74 KHLFHWE---------------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNS 138 (423)
Q Consensus 74 ~~i~~~~---------------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 138 (423)
+++.... ...+++.++..++.|++.||.|||+++ ++||||||+||+++.++.++|+|||+++..
T Consensus 96 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~-i~H~dlkp~nili~~~~~~kl~dfg~~~~~ 174 (283)
T cd05090 96 EFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF-FVHKDLAARNILIGEQLHVKISDLGLSREI 174 (283)
T ss_pred HHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC-eehhccccceEEEcCCCcEEeccccccccc
Confidence 9984211 234788999999999999999999999 999999999999999999999999998765
Q ss_pred CCC------CccccCcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCCh
Q 014484 139 RDG------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSN 211 (423)
Q Consensus 139 ~~~------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (423)
... ....++..|+|||.+.+..++.++|||||||++|||++ |..||..... ......+........+.
T Consensus 175 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~ 249 (283)
T cd05090 175 YSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN-----QEVIEMVRKRQLLPCSE 249 (283)
T ss_pred cCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHHHHcCCcCCCCC
Confidence 332 22334667999999988889999999999999999998 7777655321 11112222222223445
Q ss_pred hHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHh
Q 014484 212 DEGTELVRLASRCLQSEARERPNAKSLVISLMS 244 (423)
Q Consensus 212 ~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~ 244 (423)
.+++.+.+++.+||+.||.+||++.+++++|..
T Consensus 250 ~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 250 DCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred CCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 567889999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-39 Score=293.08 Aligned_cols=236 Identities=24% Similarity=0.320 Sum_probs=197.3
Q ss_pred CCCCccceeeee-----cceeeeeecCCChhh--HHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF-----HCHLKSSVLESSDLG--ETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~-----~~~~~~~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||++.+. +..+++|.+...... ...+.+|++.+..++|+||+++++++..+...++||||+++++|.+
T Consensus 6 g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 85 (262)
T cd00192 6 GAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEGGDLLD 85 (262)
T ss_pred CCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccCCcHHH
Confidence 899999999986 556777777655443 5788999999999999999999999999999999999999999999
Q ss_pred hhccCC-------CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC------
Q 014484 75 HLFHWE-------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------ 141 (423)
Q Consensus 75 ~i~~~~-------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~------ 141 (423)
++.... ...+++..++.++.|++.||.+||+++ ++|+||+|+||+++.++.++|+|||.+......
T Consensus 86 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~-i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~ 164 (262)
T cd00192 86 YLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK-FVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKK 164 (262)
T ss_pred HHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC-cccCccCcceEEECCCCcEEEcccccccccccccccccc
Confidence 996531 367999999999999999999999999 999999999999999999999999999876543
Q ss_pred CccccCcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHH
Q 014484 142 KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRL 220 (423)
Q Consensus 142 ~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 220 (423)
....++..|+|||.+.+..++.++|||||||++|+|++ |..||...... ..............+..+++++.++
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l 239 (262)
T cd00192 165 TGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNE-----EVLEYLRKGYRLPKPEYCPDELYEL 239 (262)
T ss_pred cCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHH-----HHHHHHHcCCCCCCCccCChHHHHH
Confidence 23456788999999988889999999999999999999 57776654211 1111121122334455668899999
Q ss_pred HHHhcccCcCCCCCHHHHHHHHH
Q 014484 221 ASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 221 i~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
+.+||..||.+|||+.+++++|+
T Consensus 240 i~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 240 MLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred HHHHccCCcccCcCHHHHHHhhC
Confidence 99999999999999999998863
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-39 Score=304.42 Aligned_cols=242 Identities=19% Similarity=0.308 Sum_probs=191.9
Q ss_pred CCCCCccceeeeec-------ceeeeeecCCC--hhhHHHHHHHHHHHhcC-CCCCccceEeEEEeC-CceeEEEecCCC
Q 014484 1 MGGRCSKFSICWFH-------CHLKSSVLESS--DLGETLNLEEAKAVGNL-RSERLANLIGCCYEA-DERLLVAEFMPN 69 (423)
Q Consensus 1 ~G~~g~v~~~~~~~-------~~~~~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~-~~~~lv~e~~~~ 69 (423)
.|+||.||.+.+.+ ..+++|.+... ......+..|+.++.++ +|+||++++++|... ...+++|||+++
T Consensus 17 ~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~~~v~ey~~~ 96 (337)
T cd05054 17 RGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEYCKF 96 (337)
T ss_pred cCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCCEEEEEecCCC
Confidence 49999999997643 45777776543 22345678899999999 899999999988754 457899999999
Q ss_pred CCHHhhhccCC-----------------------------------------------------------CCCCCHHHHH
Q 014484 70 ETLAKHLFHWE-----------------------------------------------------------TQPMKWAMRL 90 (423)
Q Consensus 70 ~~L~~~i~~~~-----------------------------------------------------------~~~~~~~~~~ 90 (423)
++|.+++.... ...+++..+.
T Consensus 97 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 176 (337)
T cd05054 97 GNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLTLEDLI 176 (337)
T ss_pred CCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHhhcCCCHHHHH
Confidence 99999885321 1268899999
Q ss_pred HHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC------CccccCcccCCccccccCCCCCC
Q 014484 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------KSYSTNLAFTPPEYMRTGRVTPE 164 (423)
Q Consensus 91 ~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~ 164 (423)
.++.||+.||.|||+++ |+||||||+||+++.++.++|+|||+++..... ....++..|+|||++.+..++.+
T Consensus 177 ~~~~qi~~aL~~lH~~~-ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~ 255 (337)
T cd05054 177 SYSFQVARGMEFLASRK-CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVYTTQ 255 (337)
T ss_pred HHHHHHHHHHHHHHhCC-eecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHHhcCCCCCcc
Confidence 99999999999999999 999999999999999999999999999865322 22345678999999998999999
Q ss_pred cceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 165 SVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 165 ~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
+|||||||++|||++ |..||...... ..+...+........+...++++.+++.+||+.+|++||++.+++++|.
T Consensus 256 ~Di~SlGv~l~el~t~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~ 331 (337)
T cd05054 256 SDVWSFGVLLWEIFSLGASPYPGVQID----EEFCRRLKEGTRMRAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEILG 331 (337)
T ss_pred ccHHHHHHHHHHHHHcCCCCCCCCCcc----HHHHHHHhccCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 999999999999998 88777542111 1111111222222334455778999999999999999999999999998
Q ss_pred hhhh
Q 014484 244 SLQK 247 (423)
Q Consensus 244 ~~~~ 247 (423)
.+..
T Consensus 332 ~~~~ 335 (337)
T cd05054 332 DLLQ 335 (337)
T ss_pred HHHh
Confidence 8654
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-39 Score=292.59 Aligned_cols=237 Identities=23% Similarity=0.305 Sum_probs=192.7
Q ss_pred CCCCccceeeee-cceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccCC
Q 014484 2 GGRCSKFSICWF-HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80 (423)
Q Consensus 2 G~~g~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~ 80 (423)
|+||.||.+.+. ...+++|.+.......+.+.+|+++++.++||||+++++++.. ...++||||+++++|.+++....
T Consensus 17 g~~~~v~~~~~~~~~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~~~~~~ 95 (262)
T cd05071 17 GCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEM 95 (262)
T ss_pred CCCCcEEEEEecCCceEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEEEcCCCCcHHHHHhhcc
Confidence 899999999875 3457778777656556788999999999999999999998754 55799999999999999996544
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC-----ccccCcccCCccc
Q 014484 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-----SYSTNLAFTPPEY 155 (423)
Q Consensus 81 ~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-----~~~~t~~y~aPE~ 155 (423)
+..+++..+..++.|++.||.|||+++ ++|+||||+||++++++.++|+|||.++...... ...++..|+|||.
T Consensus 96 ~~~~~~~~~~~~~~~l~~aL~~lH~~~-i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~ 174 (262)
T cd05071 96 GKYLRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 174 (262)
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHCC-ccccccCcccEEEcCCCcEEeccCCceeeccccccccccCCcccceecCHhH
Confidence 556899999999999999999999999 9999999999999999999999999987654322 2235667999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCC
Q 014484 156 MRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (423)
Q Consensus 156 ~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (423)
..+..++.++|||||||++|+|++ |..||........ ............+..++..+.+++.+||+.||++|||
T Consensus 175 ~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~ 249 (262)
T cd05071 175 ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV-----LDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPT 249 (262)
T ss_pred hccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHH-----HHHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCC
Confidence 988889999999999999999999 6666654321111 1111111222334556788999999999999999999
Q ss_pred HHHHHHHHHhh
Q 014484 235 AKSLVISLMSL 245 (423)
Q Consensus 235 ~~~vl~~l~~~ 245 (423)
+.++++.|+..
T Consensus 250 ~~~~~~~l~~~ 260 (262)
T cd05071 250 FEYLQAFLEDY 260 (262)
T ss_pred HHHHHHHHHHh
Confidence 99999988753
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-39 Score=297.57 Aligned_cols=239 Identities=19% Similarity=0.291 Sum_probs=194.3
Q ss_pred CCCCccceeeeec-------ceeeeeecCCC--hhhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCCC
Q 014484 2 GGRCSKFSICWFH-------CHLKSSVLESS--DLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNET 71 (423)
Q Consensus 2 G~~g~v~~~~~~~-------~~~~~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 71 (423)
|+||.||++.+.+ ..+++|.+... ......+.+|+.++.++ +|+||+++++++..++..++||||+++++
T Consensus 23 g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~li~e~~~~~~ 102 (293)
T cd05053 23 GAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYVVVEYAAHGN 102 (293)
T ss_pred cccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCeEEEEEeCCCCc
Confidence 8999999998753 34666666543 23445688999999999 89999999999999999999999999999
Q ss_pred HHhhhcc--------------CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEcccccccc
Q 014484 72 LAKHLFH--------------WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKN 137 (423)
Q Consensus 72 L~~~i~~--------------~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~ 137 (423)
|..++.. .....+++..+..++.|++.||.|||+++ ++||||||+||++++++.++|+|||+++.
T Consensus 103 L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~-ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~ 181 (293)
T cd05053 103 LRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK-CIHRDLAARNVLVTEDHVMKIADFGLARD 181 (293)
T ss_pred HHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCC-ccccccceeeEEEcCCCeEEeCccccccc
Confidence 9999853 12456899999999999999999999999 99999999999999999999999999886
Q ss_pred CCCCC------ccccCcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCC
Q 014484 138 SRDGK------SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFS 210 (423)
Q Consensus 138 ~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (423)
..... ...++..|+|||.+.+..++.++|||||||++|+|++ |..|+...... ..............+
T Consensus 182 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~ 256 (293)
T cd05053 182 IHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE-----ELFKLLKEGYRMEKP 256 (293)
T ss_pred cccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHH-----HHHHHHHcCCcCCCC
Confidence 54322 1234567999999988889999999999999999997 77777653221 112222222223344
Q ss_pred hhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhh
Q 014484 211 NDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQ 246 (423)
Q Consensus 211 ~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~~ 246 (423)
...+.++.+++.+||..||++|||+.++++.|..+.
T Consensus 257 ~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 257 QNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred CCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 556788999999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-39 Score=299.53 Aligned_cols=239 Identities=18% Similarity=0.223 Sum_probs=195.2
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.+. +..+++|.+.... .....+.+|+.+++.++||||+++++++..++..++||||+.+++|.++
T Consensus 11 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 90 (285)
T cd05605 11 GGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFH 90 (285)
T ss_pred CCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEeccCCCcHHHH
Confidence 899999999874 5678888775432 2234577899999999999999999999999999999999999999988
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC---CccccCcccCC
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTP 152 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~~t~~y~a 152 (423)
+.......+++..+..++.|++.||.|||+++ ++||||||+||++++++.++|+|||++...... ....|+..|+|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~a 169 (285)
T cd05605 91 IYNMGNPGFDEERAVFYAAEITCGLEDLHRER-IVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETIRGRVGTVGYMA 169 (285)
T ss_pred HHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCC-cEecCCCHHHEEECCCCCEEEeeCCCceecCCCCccccccCCCCccC
Confidence 86544557999999999999999999999999 999999999999999999999999998765433 23467899999
Q ss_pred ccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCC
Q 014484 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (423)
Q Consensus 153 PE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (423)
||.+.+..++.++||||+||++|+|++|..||......... ..+...+. .....++...+..+.+++.+||..||.+|
T Consensus 170 PE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~P~~R 247 (285)
T cd05605 170 PEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKR-EEVERRVK-EDQEEYSEKFSEAARSICRQLLTKDPGFR 247 (285)
T ss_pred cHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHH-HHHHHHhh-hcccccCcccCHHHHHHHHHHccCCHHHh
Confidence 99999888999999999999999999999988754221111 11111111 11223445567889999999999999999
Q ss_pred C-----CHHHHHHHHH
Q 014484 233 P-----NAKSLVISLM 243 (423)
Q Consensus 233 p-----s~~~vl~~l~ 243 (423)
| ++++++.|..
T Consensus 248 ~~~~~~~~~~l~~~~~ 263 (285)
T cd05605 248 LGCRGEGAEEVKAHPF 263 (285)
T ss_pred cCCCCCCHHHHhcCcC
Confidence 9 8999988743
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-39 Score=310.98 Aligned_cols=234 Identities=17% Similarity=0.181 Sum_probs=191.3
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+... +..+++|++.... .....+.+|+.++..++||||+++++++.+++..++||||++||+|.++
T Consensus 54 G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~ 133 (370)
T cd05596 54 GAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMVMEYMPGGDLVNL 133 (370)
T ss_pred CCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEcCCCCCcHHHH
Confidence 899999998874 6678888775432 2344577899999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-----CccccCccc
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYSTNLAF 150 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~~t~~y 150 (423)
+. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++...... ....||+.|
T Consensus 134 l~---~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~~~~~~~gt~~y 209 (370)
T cd05596 134 MS---NYDIPEKWARFYTAEVVLALDAIHSMG-FIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMVRCDTAVGTPDY 209 (370)
T ss_pred HH---hcCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEEcCCCCEEEEeccceeeccCCCcccCCCCCCCcCe
Confidence 84 345899999999999999999999999 999999999999999999999999998765432 234689999
Q ss_pred CCccccccC----CCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCCh--hHHHHHHHHHHHh
Q 014484 151 TPPEYMRTG----RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSN--DEGTELVRLASRC 224 (423)
Q Consensus 151 ~aPE~~~~~----~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~li~~c 224 (423)
+|||.+.+. .++.++|||||||++|||++|..||....... ....+........++. .++.++.++|.+|
T Consensus 210 ~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~----~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~ 285 (370)
T cd05596 210 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG----TYSKIMDHKNSLTFPDDIEISKQAKDLICAF 285 (370)
T ss_pred ECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHH----HHHHHHcCCCcCCCCCcCCCCHHHHHHHHHH
Confidence 999988653 37889999999999999999999987653221 1222222111112222 4678999999999
Q ss_pred cccCcCC--CCCHHHHHHHHH
Q 014484 225 LQSEARE--RPNAKSLVISLM 243 (423)
Q Consensus 225 l~~dp~~--Rps~~~vl~~l~ 243 (423)
|+.+|.+ |+|+++++.|..
T Consensus 286 L~~~p~r~~R~s~~ell~h~~ 306 (370)
T cd05596 286 LTDREVRLGRNGVDEIKSHPF 306 (370)
T ss_pred ccChhhccCCCCHHHHhcCcc
Confidence 9999988 999999998854
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-39 Score=301.19 Aligned_cols=237 Identities=17% Similarity=0.213 Sum_probs=186.4
Q ss_pred CCCCccceeeee--cceeeeeecCCCh--hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~ 77 (423)
|+||.||++... +..+++|++.... .....+.+|+.++..++||||+++++++...+..++||||+.+ +|.+++.
T Consensus 16 G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~ 94 (288)
T cd07871 16 GTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEYLDS-DLKQYLD 94 (288)
T ss_pred CCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeCCCc-CHHHHHH
Confidence 899999999874 5667777765432 2345678999999999999999999999999999999999976 9999885
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccCCc
Q 014484 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPP 153 (423)
Q Consensus 78 ~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~aP 153 (423)
. .+..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....+++.|+||
T Consensus 95 ~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~y~aP 172 (288)
T cd07871 95 N-CGNLMSMHNVKIFMFQLLRGLSYCHKRK-ILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYSNEVVTLWYRPP 172 (288)
T ss_pred h-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEECCCCCEEECcCcceeeccCCCccccCceecccccCh
Confidence 4 3446899999999999999999999999 999999999999999999999999998754322 234578999999
Q ss_pred ccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchh--------------------hhhccccccC----C
Q 014484 154 EYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNF--------------------LLLMDSALEG----H 208 (423)
Q Consensus 154 E~~~~-~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~----~ 208 (423)
|.+.+ ..++.++||||+||++|+|++|..||............. .....+.... .
T Consensus 173 E~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (288)
T cd07871 173 DVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLIN 252 (288)
T ss_pred HHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHH
Confidence 98875 458999999999999999999998886543221110000 0000000000 0
Q ss_pred CChhHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014484 209 FSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (423)
Q Consensus 209 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~ 241 (423)
.....+.++.++|.+||+.||.+|||++++++|
T Consensus 253 ~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h 285 (288)
T cd07871 253 HAPRLDTDGIDLLSSLLLYETKSRISAEAALRH 285 (288)
T ss_pred hCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 012346789999999999999999999999976
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-39 Score=296.41 Aligned_cols=236 Identities=17% Similarity=0.226 Sum_probs=188.7
Q ss_pred CCCCccceeeeec-------ceeeeeecCCCh--hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICWFH-------CHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~~~-------~~~~~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 72 (423)
||||.||.+.+.+ ..+++|.+.... .....+.+|+.+++.++||||+++++++..+...++||||+++++|
T Consensus 17 G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L 96 (277)
T cd05062 17 GSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDL 96 (277)
T ss_pred ccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCeEEEEecCCCCCH
Confidence 8999999987642 346777664322 3355688999999999999999999999999999999999999999
Q ss_pred HhhhccCC--------CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC--
Q 014484 73 AKHLFHWE--------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-- 142 (423)
Q Consensus 73 ~~~i~~~~--------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-- 142 (423)
.+++.... ...+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++......
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~ 175 (277)
T cd05062 97 KSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 175 (277)
T ss_pred HHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCcchheEEEcCCCCEEECCCCCccccCCccee
Confidence 99985321 124678889999999999999999999 9999999999999999999999999987543321
Q ss_pred ----ccccCcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHH
Q 014484 143 ----SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTEL 217 (423)
Q Consensus 143 ----~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 217 (423)
...++..|+|||.+.+..++.++|||||||++|||++ |..||...... ..............+..++..+
T Consensus 176 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 250 (277)
T cd05062 176 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNE-----QVLRFVMEGGLLDKPDNCPDML 250 (277)
T ss_pred ecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH-----HHHHHHHcCCcCCCCCCCCHHH
Confidence 2234678999999998889999999999999999999 56666543211 1111111112223445567789
Q ss_pred HHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 218 VRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 218 ~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
.+++.+||+.||++|||+.+++.+|+
T Consensus 251 ~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 251 FELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred HHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 99999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-39 Score=301.57 Aligned_cols=239 Identities=15% Similarity=0.164 Sum_probs=184.9
Q ss_pred CCCCccceeeee--cceeeeeecCCCh--hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~ 77 (423)
|+||.||.+.+. +..+++|++.... .....+.+|+.+++.++||||+++++++..+...++||||+.+ +|.+++.
T Consensus 16 G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~ 94 (303)
T cd07869 16 GSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEYVHT-DLCQYMD 94 (303)
T ss_pred cCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEECCCc-CHHHHHH
Confidence 899999999884 5677888765433 2234677899999999999999999999999999999999964 8888775
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccCCc
Q 014484 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPP 153 (423)
Q Consensus 78 ~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~aP 153 (423)
. ..+.+++..+..++.|++.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....+|+.|+||
T Consensus 95 ~-~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aP 172 (303)
T cd07869 95 K-HPGGLHPENVKLFLFQLLRGLSYIHQRY-ILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYSNEVVTLWYRPP 172 (303)
T ss_pred h-CCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEECCCCcceeccCCCccCCCCcccCCCCCh
Confidence 4 3456899999999999999999999999 999999999999999999999999998754322 234578999999
Q ss_pred cccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhcc------------------ccccCCCCh---
Q 014484 154 EYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD------------------SALEGHFSN--- 211 (423)
Q Consensus 154 E~~~~~-~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~--- 211 (423)
|++.+. .++.++||||+||++|+|++|..||.................. .......+.
T Consensus 173 E~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (303)
T cd07869 173 DVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLR 252 (303)
T ss_pred HHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccccccccCCccHH
Confidence 988754 4788999999999999999999998753111000000000000 000000000
Q ss_pred ------hHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 212 ------DEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 212 ------~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
..+.++.+++.+||+.||++|||++++++|-.
T Consensus 253 ~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~ 290 (303)
T cd07869 253 QAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEY 290 (303)
T ss_pred HHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcc
Confidence 12357889999999999999999999998743
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-39 Score=305.01 Aligned_cols=232 Identities=16% Similarity=0.222 Sum_probs=191.6
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||++.+. +..+++|++.... .....+.+|++++..+ +||||+++++++...+..|+||||++|++|..
T Consensus 6 G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 85 (318)
T cd05570 6 GSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNGGDLMF 85 (318)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCCCHHH
Confidence 899999999885 5567888775432 2345677899999888 79999999999999999999999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCC----CCccccCccc
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNLAF 150 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~~t~~y 150 (423)
++.+ ...+++..+..++.|++.||.|||+++ ++||||||+||+++.++.++|+|||+++.... .....|++.|
T Consensus 86 ~~~~--~~~l~~~~~~~~~~qi~~~l~~LH~~~-ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y 162 (318)
T cd05570 86 HIQR--SGRFDEPRARFYAAEIVLGLQFLHERG-IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFCGTPDY 162 (318)
T ss_pred HHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcccceecCccc
Confidence 8854 457999999999999999999999999 99999999999999999999999999865322 1234588999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcC
Q 014484 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (423)
Q Consensus 151 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (423)
+|||++.+..++.++|+|||||++|+|++|..||......... ..... ....++..++.++.++|.+||+.||.
T Consensus 163 ~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~----~~i~~--~~~~~~~~~~~~~~~li~~~l~~dP~ 236 (318)
T cd05570 163 IAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELF----QSILE--DEVRYPRWLSKEAKSILKSFLTKNPE 236 (318)
T ss_pred cCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHH----HHHHc--CCCCCCCcCCHHHHHHHHHHccCCHH
Confidence 9999999989999999999999999999999988654222111 11111 11234455678899999999999999
Q ss_pred CCCCH-----HHHHHHH
Q 014484 231 ERPNA-----KSLVISL 242 (423)
Q Consensus 231 ~Rps~-----~~vl~~l 242 (423)
+|||+ .+++.+-
T Consensus 237 ~R~s~~~~~~~~ll~~~ 253 (318)
T cd05570 237 KRLGCLPTGEQDIKGHP 253 (318)
T ss_pred HcCCCCCCCHHHHhcCC
Confidence 99999 8888763
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-39 Score=304.25 Aligned_cols=231 Identities=17% Similarity=0.217 Sum_probs=188.5
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||.+.+. +..+++|++.... .....+..|..++..+ +||||+++++++.+.+..++||||++||+|.+
T Consensus 6 G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~g~L~~ 85 (316)
T cd05619 6 GSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNGGDLMF 85 (316)
T ss_pred CCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCCCcHHH
Confidence 899999999875 5668888775532 2344567788888765 99999999999999999999999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCC----CCccccCccc
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNLAF 150 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~~t~~y 150 (423)
++.. ...+++.++..++.|++.||.|||+++ ++||||||+|||++.++.++|+|||+++.... .....||+.|
T Consensus 86 ~l~~--~~~~~~~~~~~~~~qi~~al~~LH~~~-ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y 162 (316)
T cd05619 86 HIQS--CHKFDLPRATFYAAEIICGLQFLHSKG-IVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCGTPDY 162 (316)
T ss_pred HHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceeeecCCccc
Confidence 9853 456899999999999999999999999 99999999999999999999999999875322 2335689999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcC
Q 014484 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (423)
Q Consensus 151 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (423)
+|||++.+..++.++||||+||++|+|++|..||........ ...+.. ....++..++.++.+++.+||+.||+
T Consensus 163 ~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~-----~~~i~~-~~~~~~~~~~~~~~~li~~~l~~~P~ 236 (316)
T cd05619 163 IAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEEL-----FQSIRM-DNPCYPRWLTREAKDILVKLFVREPE 236 (316)
T ss_pred cCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHH-----HHHHHh-CCCCCCccCCHHHHHHHHHHhccCHh
Confidence 999999988899999999999999999999998865422111 111111 11223445677899999999999999
Q ss_pred CCCCHH-HHHHH
Q 014484 231 ERPNAK-SLVIS 241 (423)
Q Consensus 231 ~Rps~~-~vl~~ 241 (423)
+||++. +++.|
T Consensus 237 ~R~~~~~~l~~h 248 (316)
T cd05619 237 RRLGVKGDIRQH 248 (316)
T ss_pred hcCCChHHHHcC
Confidence 999997 66655
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-39 Score=292.91 Aligned_cols=234 Identities=23% Similarity=0.321 Sum_probs=191.5
Q ss_pred CCCCccceeeee-cceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccCC
Q 014484 2 GGRCSKFSICWF-HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80 (423)
Q Consensus 2 G~~g~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~ 80 (423)
|+||.||.+.+. +..+++|.+.........+.+|+++++.++||||+++++++...+..++||||++|++|.+++...
T Consensus 15 G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~- 93 (256)
T cd05059 15 GQFGVVHLGKWRGKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRER- 93 (256)
T ss_pred CCCceEEEeEecCCccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCCCCHHHHHHhc-
Confidence 889999999875 346777777665555667889999999999999999999999999999999999999999998643
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCCc-----cccCcccCCccc
Q 014484 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS-----YSTNLAFTPPEY 155 (423)
Q Consensus 81 ~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-----~~~t~~y~aPE~ 155 (423)
...+++..+..++.|++.||.|||+++ ++||||||+||+++.++.++|+|||+++....... ..++..|+|||.
T Consensus 94 ~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~ 172 (256)
T cd05059 94 KGKLGTEWLLDMCSDVCEAMEYLESNG-FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEV 172 (256)
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHCC-cccccccHhhEEECCCCcEEECCcccceecccccccccCCCCCCccccCHHH
Confidence 346899999999999999999999999 99999999999999999999999999876543221 123457999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCC
Q 014484 156 MRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (423)
Q Consensus 156 ~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (423)
+.+..++.++|+||||+++|+|++ |..||....... .............+..++.++.+++.+||..+|++|||
T Consensus 173 ~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt 247 (256)
T cd05059 173 FDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSE-----VVESVSAGYRLYRPKLAPTEVYTIMYSCWHEKPEDRPA 247 (256)
T ss_pred hccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHH-----HHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcC
Confidence 998889999999999999999999 676665431111 11111122222334456788999999999999999999
Q ss_pred HHHHHHHH
Q 014484 235 AKSLVISL 242 (423)
Q Consensus 235 ~~~vl~~l 242 (423)
+.++++.|
T Consensus 248 ~~~~l~~l 255 (256)
T cd05059 248 FKKLLSQL 255 (256)
T ss_pred HHHHHHHh
Confidence 99999876
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-39 Score=298.70 Aligned_cols=239 Identities=19% Similarity=0.307 Sum_probs=193.2
Q ss_pred CCCCccceeeee-------cceeeeeecCCCh--hhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCCC
Q 014484 2 GGRCSKFSICWF-------HCHLKSSVLESSD--LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNET 71 (423)
Q Consensus 2 G~~g~v~~~~~~-------~~~~~~~~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 71 (423)
|+||.||.+.+. +..+++|.+.... ...+.+.+|+++++++ +||||+++++++...+..++||||+++++
T Consensus 46 G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 125 (302)
T cd05055 46 GAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPILVITEYCCYGD 125 (302)
T ss_pred cCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCceEEEEEcCCCCc
Confidence 899999998753 2356667665432 3345788999999999 89999999999999999999999999999
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC------ccc
Q 014484 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK------SYS 145 (423)
Q Consensus 72 L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~------~~~ 145 (423)
|.+++.......+++.++..++.|++.||.|||+++ ++|+||||+||+++.++.++++|||+++...... ...
T Consensus 126 L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 204 (302)
T cd05055 126 LLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKN-CIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNAR 204 (302)
T ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eehhhhccceEEEcCCCeEEECCCcccccccCCCceeecCCCC
Confidence 999996544445899999999999999999999999 9999999999999999999999999987654332 123
Q ss_pred cCcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHh
Q 014484 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRC 224 (423)
Q Consensus 146 ~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 224 (423)
++..|+|||.+.+..++.++||||+||++|+|++ |..|+...... ...............+...++++.+++.+|
T Consensus 205 ~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~li~~c 280 (302)
T cd05055 205 LPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVD----SKFYKLIKEGYRMAQPEHAPAEIYDIMKTC 280 (302)
T ss_pred cccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCch----HHHHHHHHcCCcCCCCCCCCHHHHHHHHHH
Confidence 4678999999998889999999999999999998 88776543211 111122222222223344567899999999
Q ss_pred cccCcCCCCCHHHHHHHHHhh
Q 014484 225 LQSEARERPNAKSLVISLMSL 245 (423)
Q Consensus 225 l~~dp~~Rps~~~vl~~l~~~ 245 (423)
|..+|++|||+.+++..|.++
T Consensus 281 l~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 281 WDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred cCCCchhCcCHHHHHHHHHhh
Confidence 999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-39 Score=292.68 Aligned_cols=236 Identities=21% Similarity=0.298 Sum_probs=195.4
Q ss_pred CCCCccceeeee-cceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccCC
Q 014484 2 GGRCSKFSICWF-HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80 (423)
Q Consensus 2 G~~g~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~ 80 (423)
|+||.||.+... +..+++|.+.........+.+|+.+++.++|+||+++++++. .+..+++|||+.+++|.+++....
T Consensus 17 G~~g~v~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~ 95 (260)
T cd05067 17 GQFGEVWMGYYNGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPE 95 (260)
T ss_pred CccceEEeeecCCCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcCCCCCHHHHHHhcC
Confidence 899999999874 577888888776767788999999999999999999999874 456899999999999999986555
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-----CccccCcccCCccc
Q 014484 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYSTNLAFTPPEY 155 (423)
Q Consensus 81 ~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~~t~~y~aPE~ 155 (423)
+..+++.++..++.|++.||.|||+.+ ++||||||+||++++++.++|+|||++...... ....++..|+|||.
T Consensus 96 ~~~~~~~~~~~i~~~i~~al~~LH~~~-i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~pe~ 174 (260)
T cd05067 96 GIKLTINKLIDMAAQIAEGMAFIERKN-YIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEA 174 (260)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcCC-eecccccHHhEEEcCCCCEEEccCcceeecCCCCcccccCCcccccccCHHH
Confidence 567999999999999999999999999 999999999999999999999999998765422 12334678999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCC
Q 014484 156 MRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (423)
Q Consensus 156 ~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (423)
+.+..++.++||||||+++|+|++ |..||...... ..............+...+.++.+++.+||..+|++|||
T Consensus 175 ~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~ 249 (260)
T cd05067 175 INYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP-----EVIQNLERGYRMPRPDNCPEELYELMRLCWKEKPEERPT 249 (260)
T ss_pred hccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChH-----HHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCC
Confidence 988889999999999999999999 88877643211 111111222222334456778999999999999999999
Q ss_pred HHHHHHHHHh
Q 014484 235 AKSLVISLMS 244 (423)
Q Consensus 235 ~~~vl~~l~~ 244 (423)
+++++..|..
T Consensus 250 ~~~l~~~l~~ 259 (260)
T cd05067 250 FEYLRSVLED 259 (260)
T ss_pred HHHHHHHhhc
Confidence 9999998864
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-39 Score=309.41 Aligned_cols=233 Identities=15% Similarity=0.115 Sum_probs=187.5
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+... +..+++|++.... .....+.+|+.++..++|+||+++++++.++...|+||||++||+|.++
T Consensus 12 G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~ 91 (363)
T cd05628 12 GAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTL 91 (363)
T ss_pred CCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEcCCCCCcHHHH
Confidence 899999999874 6778888875532 2235677899999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC--------------
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-------------- 141 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-------------- 141 (423)
+.+ .+.+++..+..++.|++.||.|||+++ |+||||||+|||++.++.++|+|||+++.....
T Consensus 92 l~~--~~~l~~~~~~~~~~qi~~aL~~lH~~g-ivHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~ 168 (363)
T cd05628 92 LMK--KDTLTEEETQFYIAETVLAIDSIHQLG-FIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLP 168 (363)
T ss_pred HHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEecCCCHHHeEECCCCCEEEeeccCccccccccccccccccccccc
Confidence 964 457999999999999999999999999 999999999999999999999999998753211
Q ss_pred -------------------------CccccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhch
Q 014484 142 -------------------------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKN 196 (423)
Q Consensus 142 -------------------------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~ 196 (423)
....||+.|+|||++.+..++.++|||||||++|||++|..||........
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~~~~~~---- 244 (363)
T cd05628 169 SDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQET---- 244 (363)
T ss_pred ccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCCCHHHH----
Confidence 124689999999999988999999999999999999999999876432211
Q ss_pred hhhhccccccCCCC--hhHHHHHHHHHHHhcccCcC---CCCCHHHHHHHH
Q 014484 197 FLLLMDSALEGHFS--NDEGTELVRLASRCLQSEAR---ERPNAKSLVISL 242 (423)
Q Consensus 197 ~~~~~~~~~~~~~~--~~~~~~l~~li~~cl~~dp~---~Rps~~~vl~~l 242 (423)
...+........++ ...++++.++|.+|+. +|. .||+++++++|-
T Consensus 245 ~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~hp 294 (363)
T cd05628 245 YKKVMNWKETLIFPPEVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTNP 294 (363)
T ss_pred HHHHHcCcCcccCCCcCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCCC
Confidence 11111111111122 2356789999998664 444 468999999883
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-39 Score=299.54 Aligned_cols=241 Identities=19% Similarity=0.227 Sum_probs=191.6
Q ss_pred CCCCccceeeee--c--ceeeeeecCC--ChhhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF--H--CHLKSSVLES--SDLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~--~--~~~~~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||++.+. + ..++++.+.. .......+.+|++++.++ +||||+++++++..++..++||||+++++|.+
T Consensus 18 G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~ 97 (303)
T cd05088 18 GNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD 97 (303)
T ss_pred CCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEEEEeCCCCcHHH
Confidence 899999999874 2 2345554433 233456788999999999 89999999999999999999999999999999
Q ss_pred hhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCC
Q 014484 75 HLFHWE--------------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD 140 (423)
Q Consensus 75 ~i~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 140 (423)
++.+.. ...+++.+++.++.|++.||.|||+++ ++||||||+|||++.++.++|+|||+++....
T Consensus 98 ~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g-i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 176 (303)
T cd05088 98 FLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNILVGENYVAKIADFGLSRGQEV 176 (303)
T ss_pred HHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC-ccccccchheEEecCCCcEEeCccccCcccch
Confidence 986321 235889999999999999999999999 99999999999999999999999999864322
Q ss_pred C---CccccCcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHH
Q 014484 141 G---KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTE 216 (423)
Q Consensus 141 ~---~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (423)
. .....+..|+|||.+.+..++.++|||||||++|+|+| |..||...... ..............+...+++
T Consensus 177 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 251 (303)
T cd05088 177 YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-----ELYEKLPQGYRLEKPLNCDDE 251 (303)
T ss_pred hhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH-----HHHHHHhcCCcCCCCCCCCHH
Confidence 1 11223567999999988889999999999999999998 88777543221 111112222222234446778
Q ss_pred HHHHHHHhcccCcCCCCCHHHHHHHHHhhhhh
Q 014484 217 LVRLASRCLQSEARERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 217 l~~li~~cl~~dp~~Rps~~~vl~~l~~~~~~ 248 (423)
+.+++.+||+.+|++|||+++++..+..+...
T Consensus 252 ~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~ 283 (303)
T cd05088 252 VYDLMRQCWREKPYERPSFAQILVSLNRMLEE 283 (303)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999887655
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-40 Score=279.51 Aligned_cols=240 Identities=16% Similarity=0.170 Sum_probs=194.2
Q ss_pred CCCCccceeeee--cceeeeeecCCCh---hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
|.|+.|+++... +...+.+.+...+ .+-+.+.+|+++.+.|+|||||++.+.+......|+|+|++.|++|..-|
T Consensus 22 G~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe~m~G~dl~~eI 101 (355)
T KOG0033|consen 22 GAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI 101 (355)
T ss_pred CchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEecccchHHHHHH
Confidence 778888887763 5556665553322 35667889999999999999999999999999999999999999998766
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCC---CCeEEccccccccCCCCCc---cccCccc
Q 014484 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKD---GNPRLSSFGLMKNSRDGKS---YSTNLAF 150 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~---~~~kl~Dfg~~~~~~~~~~---~~~t~~y 150 (423)
-. .-.+++..+-..+.||+.+|.|+|.++ |||||+||+|+++... .-+||+|||++.....+.. ..||+.|
T Consensus 102 V~--R~~ySEa~aSH~~rQiLeal~yCH~n~-IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~~~G~~GtP~f 178 (355)
T KOG0033|consen 102 VA--REFYSEADASHCIQQILEALAYCHSNG-IVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEAWHGFAGTPGY 178 (355)
T ss_pred HH--HHHHHHHHHHHHHHHHHHHHHHHHhcC-ceeccCChhheeeeeccCCCceeecccceEEEeCCccccccccCCCcc
Confidence 43 245888899999999999999999999 9999999999999543 3589999999998886544 4689999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcC
Q 014484 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (423)
Q Consensus 151 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (423)
||||++...+|+..+|||+.|++||-|+.|.+||.+......-.+.... .-.+.++.-+.++++..+++++||..||+
T Consensus 179 maPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g--~yd~~~~~w~~is~~Ak~LvrrML~~dP~ 256 (355)
T KOG0033|consen 179 LSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAG--AYDYPSPEWDTVTPEAKSLIRRMLTVNPK 256 (355)
T ss_pred cCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhcc--ccCCCCcccCcCCHHHHHHHHHHhccChh
Confidence 9999999999999999999999999999999999885333222211111 11222323345788999999999999999
Q ss_pred CCCCHHHHHHHHHhhh
Q 014484 231 ERPNAKSLVISLMSLQ 246 (423)
Q Consensus 231 ~Rps~~~vl~~l~~~~ 246 (423)
+|.|+.|.|+|.+--.
T Consensus 257 kRIta~EAL~HpWi~~ 272 (355)
T KOG0033|consen 257 KRITADEALKHPWICN 272 (355)
T ss_pred hhccHHHHhCCchhcc
Confidence 9999999999865433
|
|
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=296.33 Aligned_cols=241 Identities=22% Similarity=0.276 Sum_probs=193.5
Q ss_pred CCCCccceeeee-------cceeeeeecCCC-hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHH
Q 014484 2 GGRCSKFSICWF-------HCHLKSSVLESS-DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLA 73 (423)
Q Consensus 2 G~~g~v~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 73 (423)
|+||.||.+... ...++++.+... ......+.+|+.++.+++||||+++++++...+..++||||+++++|.
T Consensus 16 G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 95 (288)
T cd05093 16 GAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLN 95 (288)
T ss_pred cCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcCCCCCHH
Confidence 899999998742 234666666543 334667899999999999999999999999999999999999999999
Q ss_pred hhhccCC-----------CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-
Q 014484 74 KHLFHWE-----------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG- 141 (423)
Q Consensus 74 ~~i~~~~-----------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~- 141 (423)
+++.... ...+++..+..++.|++.||.|||+++ ++||||||+||++++++.++|+|||+++.....
T Consensus 96 ~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~-i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~ 174 (288)
T cd05093 96 KFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH-FVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTD 174 (288)
T ss_pred HHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccCcceEEEccCCcEEeccCCccccccCCc
Confidence 9985321 234899999999999999999999999 999999999999999999999999998755332
Q ss_pred -----CccccCcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHH
Q 014484 142 -----KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGT 215 (423)
Q Consensus 142 -----~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (423)
....++..|+|||.+.+..++.++|||||||++++|++ |..||........ ..... .......+..++.
T Consensus 175 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~----~~~i~-~~~~~~~~~~~~~ 249 (288)
T cd05093 175 YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEV----IECIT-QGRVLQRPRTCPK 249 (288)
T ss_pred eeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH----HHHHH-cCCcCCCCCCCCH
Confidence 12234678999999998889999999999999999998 7777654321111 11111 1111223344677
Q ss_pred HHHHHHHHhcccCcCCCCCHHHHHHHHHhhhhh
Q 014484 216 ELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 216 ~l~~li~~cl~~dp~~Rps~~~vl~~l~~~~~~ 248 (423)
++.+++.+||+.||.+|||+.+++..|+.+...
T Consensus 250 ~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 250 EVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred HHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 899999999999999999999999999887754
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-39 Score=295.10 Aligned_cols=232 Identities=23% Similarity=0.307 Sum_probs=184.8
Q ss_pred CCCCccceeeeec--------------------------ceeeeeecCCChhh-HHHHHHHHHHHhcCCCCCccceEeEE
Q 014484 2 GGRCSKFSICWFH--------------------------CHLKSSVLESSDLG-ETLNLEEAKAVGNLRSERLANLIGCC 54 (423)
Q Consensus 2 G~~g~v~~~~~~~--------------------------~~~~~~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~ 54 (423)
|+||.||++.+.. ..+++|++...... ...+.+|+.+++.++||||+++++++
T Consensus 6 G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~ 85 (274)
T cd05076 6 GTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFVHGVC 85 (274)
T ss_pred ccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeEEEEE
Confidence 8999999998631 33566666544332 45688899999999999999999999
Q ss_pred EeCCceeEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCC-------Ce
Q 014484 55 YEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG-------NP 127 (423)
Q Consensus 55 ~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~-------~~ 127 (423)
..+...++||||+++++|..++.+ ..+.+++..+..++.|++.||.|||+++ |+||||||+||+++..+ .+
T Consensus 86 ~~~~~~~lv~ey~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-iiH~dlkp~Nill~~~~~~~~~~~~~ 163 (274)
T cd05076 86 VRGSENIMVEEFVEHGPLDVCLRK-EKGRVPVAWKITVAQQLASALSYLEDKN-LVHGNVCAKNILLARLGLAEGTSPFI 163 (274)
T ss_pred EeCCceEEEEecCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHcCC-ccCCCCCcccEEEeccCcccCcccee
Confidence 999999999999999999998854 3457899999999999999999999999 99999999999997654 37
Q ss_pred EEccccccccCCCCCccccCcccCCcccccc-CCCCCCcceehhHHHHHHHh-hCCCCCCchhhHHhhhchhhhhccccc
Q 014484 128 RLSSFGLMKNSRDGKSYSTNLAFTPPEYMRT-GRVTPESVVYSFGTMLLDLL-SGKHIPPSHALDLIRSKNFLLLMDSAL 205 (423)
Q Consensus 128 kl~Dfg~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~-~g~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (423)
+++|||++..........++..|+|||.+.+ ..++.++|||||||++|||+ +|..|+........ ......
T Consensus 164 kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~-----~~~~~~-- 236 (274)
T cd05076 164 KLSDPGVSFTALSREERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEK-----ERFYEK-- 236 (274)
T ss_pred eecCCccccccccccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHH-----HHHHHh--
Confidence 9999999876555555567889999998875 45899999999999999995 67777654321111 011111
Q ss_pred cCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHH
Q 014484 206 EGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISL 242 (423)
Q Consensus 206 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l 242 (423)
....+...++++.+++.+||+.+|++|||+.++++.|
T Consensus 237 ~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 237 KHRLPEPSCKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred ccCCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 1122333456799999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-39 Score=311.40 Aligned_cols=234 Identities=18% Similarity=0.142 Sum_probs=188.0
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.+. +..+++|++.... .....+.+|++++..++||||+++++++.+++..|+||||++||+|.++
T Consensus 12 G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~ 91 (377)
T cd05629 12 GAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIMEFLPGGDLMTM 91 (377)
T ss_pred cCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEeCCCCCcHHHH
Confidence 899999998874 6678888765432 2345678899999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC--------------
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-------------- 141 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-------------- 141 (423)
+.. .+.+++..+..++.|++.||.|||+++ |+||||||+|||++.++.++|+|||+++.....
T Consensus 92 l~~--~~~~~~~~~~~~~~ql~~aL~~LH~~g-ivHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~ 168 (377)
T cd05629 92 LIK--YDTFSEDVTRFYMAECVLAIEAVHKLG-FIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKS 168 (377)
T ss_pred HHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHEEECCCCCEEEeecccccccccccccccccccccccc
Confidence 864 457899999999999999999999999 999999999999999999999999998532110
Q ss_pred -------------------------------------CccccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCC
Q 014484 142 -------------------------------------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184 (423)
Q Consensus 142 -------------------------------------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~ 184 (423)
....||+.|+|||++.+..++.++|||||||++|||++|..||
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf 248 (377)
T cd05629 169 NKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPF 248 (377)
T ss_pred cccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhhhhhhcCCCCC
Confidence 0235889999999999888999999999999999999999998
Q ss_pred CchhhHHhhhchhhhhccccccCCCCh--hHHHHHHHHHHHhcccCcCCC---CCHHHHHHHHH
Q 014484 185 PSHALDLIRSKNFLLLMDSALEGHFSN--DEGTELVRLASRCLQSEARER---PNAKSLVISLM 243 (423)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~li~~cl~~dp~~R---ps~~~vl~~l~ 243 (423)
........ ............++. .++.++.++|.+||. +|.+| +|+.+++.|..
T Consensus 249 ~~~~~~~~----~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~ 307 (377)
T cd05629 249 CSENSHET----YRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPF 307 (377)
T ss_pred CCCCHHHH----HHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCC
Confidence 65422111 111111111111222 357789999999998 77765 69999998854
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-40 Score=306.75 Aligned_cols=234 Identities=18% Similarity=0.207 Sum_probs=194.4
Q ss_pred CCCCccceeeee--cceeeeeecCCChh----hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDL----GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.+. ...|++|.+..+.. .-.+++.||+.|.+++|||++.+-|+|......|+|||||-| |-.++
T Consensus 37 GSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYClG-SAsDl 115 (948)
T KOG0577|consen 37 GSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYCLG-SASDL 115 (948)
T ss_pred CccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHHHhc-cHHHH
Confidence 999999999874 56678877755432 234788999999999999999999999999999999999977 77676
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCCccccCcccCCccc
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEY 155 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~t~~y~aPE~ 155 (423)
+. .-.+++.+..+..|+.+.+.||.|||+.+ .||||||..|||+++.|.+||+|||.+....+..++.|||.|||||+
T Consensus 116 le-VhkKplqEvEIAAi~~gaL~gLaYLHS~~-~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAnsFvGTPywMAPEV 193 (948)
T KOG0577|consen 116 LE-VHKKPLQEVEIAAITHGALQGLAYLHSHN-RIHRDIKAGNILLSEPGLVKLADFGSASIMAPANSFVGTPYWMAPEV 193 (948)
T ss_pred HH-HHhccchHHHHHHHHHHHHHHHHHHHHhh-HHhhhccccceEecCCCeeeeccccchhhcCchhcccCCccccchhH
Confidence 63 23567999999999999999999999999 99999999999999999999999999999999999999999999998
Q ss_pred cc---cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCC
Q 014484 156 MR---TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (423)
Q Consensus 156 ~~---~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (423)
+. .+.|+-++||||||++..||...++|.+.-. . +. .+..+............++..++.|+..||++=|.+|
T Consensus 194 ILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMN-A-MS--ALYHIAQNesPtLqs~eWS~~F~~Fvd~CLqKipqeR 269 (948)
T KOG0577|consen 194 ILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN-A-MS--ALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQER 269 (948)
T ss_pred heeccccccCCccceeeccchhhhhhhcCCCccCch-H-HH--HHHHHHhcCCCCCCCchhHHHHHHHHHHHHhhCcccC
Confidence 76 4569999999999999999999997765421 0 11 1111111111112245788999999999999999999
Q ss_pred CCHHHHHHHH
Q 014484 233 PNAKSLVISL 242 (423)
Q Consensus 233 ps~~~vl~~l 242 (423)
||.++++.|.
T Consensus 270 ptse~ll~H~ 279 (948)
T KOG0577|consen 270 PTSEELLKHR 279 (948)
T ss_pred CcHHHHhhcc
Confidence 9999999873
|
|
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-39 Score=293.43 Aligned_cols=233 Identities=22% Similarity=0.294 Sum_probs=187.1
Q ss_pred CCCCccceeeeec---------ceeeeeecCCCh-hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCC
Q 014484 2 GGRCSKFSICWFH---------CHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNET 71 (423)
Q Consensus 2 G~~g~v~~~~~~~---------~~~~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 71 (423)
|+||.||++.+.. ..+++|.+.... ...+.+.+|+.+++.++||||+++++++..+...++||||+++|+
T Consensus 6 G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~ 85 (258)
T cd05078 6 GTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYVKFGS 85 (258)
T ss_pred ccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEecCCCCc
Confidence 8999999998742 225555554433 234578899999999999999999999999999999999999999
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCC--------eEEccccccccCCCCCc
Q 014484 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGN--------PRLSSFGLMKNSRDGKS 143 (423)
Q Consensus 72 L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~--------~kl~Dfg~~~~~~~~~~ 143 (423)
|.+++... +..+++..+..++.||+.||.|||+++ ++||||||+||+++.++. ++++|||++........
T Consensus 86 L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~-iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~~~~ 163 (258)
T cd05078 86 LDTYLKKN-KNLINISWKLEVAKQLAWALHFLEDKG-LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPKEI 163 (258)
T ss_pred HHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCccceEEEecccccccCCCceEEecccccccccCCchh
Confidence 99999642 346899999999999999999999999 999999999999987764 69999999887766666
Q ss_pred cccCcccCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHH
Q 014484 144 YSTNLAFTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLAS 222 (423)
Q Consensus 144 ~~~t~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 222 (423)
..+++.|+|||++.+. .++.++|||||||++|+|++|..++...... .... .... ....++...+.++.+++.
T Consensus 164 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~-~~~~---~~~~--~~~~~~~~~~~~~~~li~ 237 (258)
T cd05078 164 LLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDS-QKKL---QFYE--DRHQLPAPKWTELANLIN 237 (258)
T ss_pred ccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccH-HHHH---HHHH--ccccCCCCCcHHHHHHHH
Confidence 7788999999999864 4799999999999999999996444322111 1111 1111 112344445678999999
Q ss_pred HhcccCcCCCCCHHHHHHHH
Q 014484 223 RCLQSEARERPNAKSLVISL 242 (423)
Q Consensus 223 ~cl~~dp~~Rps~~~vl~~l 242 (423)
+||+.||++|||++++++.|
T Consensus 238 ~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 238 QCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred HHhccChhhCCCHHHHHHhc
Confidence 99999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-38 Score=291.97 Aligned_cols=236 Identities=23% Similarity=0.319 Sum_probs=193.7
Q ss_pred CCCCccceeeee-cceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccCC
Q 014484 2 GGRCSKFSICWF-HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80 (423)
Q Consensus 2 G~~g~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~ 80 (423)
|+||.||.+.+. +..+++|.+.......+.+.+|+.++++++|+|++++++++. ....+++|||+++++|.+++....
T Consensus 17 g~~~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~ 95 (260)
T cd05070 17 GQFGEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKDGE 95 (260)
T ss_pred ccCceEEEEEecCCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecCCCcHHHHHHhcC
Confidence 899999999874 456788877766666678999999999999999999999885 456899999999999999996544
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC-----ccccCcccCCccc
Q 014484 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-----SYSTNLAFTPPEY 155 (423)
Q Consensus 81 ~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-----~~~~t~~y~aPE~ 155 (423)
...+++..+..++.|++.||.|||+++ ++||||||+||++++++.++|+|||++....... ...++..|+|||.
T Consensus 96 ~~~~~~~~~~~~~~~l~~al~~lH~~~-i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~ 174 (260)
T cd05070 96 GRALKLPNLVDMAAQVAAGMAYIERMN-YIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEA 174 (260)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCccceEEEeCCceEEeCCceeeeeccCcccccccCCCCCccccChHH
Confidence 556899999999999999999999999 9999999999999999999999999987654322 1234567999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCC
Q 014484 156 MRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (423)
Q Consensus 156 ~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (423)
+.+..++.++|+||||+++|+|++ |..||...... ..............+...+..+.+++.+||..||++|||
T Consensus 175 ~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt 249 (260)
T cd05070 175 ALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR-----EVLEQVERGYRMPCPQDCPISLHELMLQCWKKDPEERPT 249 (260)
T ss_pred HhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH-----HHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccCcccCcC
Confidence 988889999999999999999999 77777553211 111112222223345566788999999999999999999
Q ss_pred HHHHHHHHHh
Q 014484 235 AKSLVISLMS 244 (423)
Q Consensus 235 ~~~vl~~l~~ 244 (423)
+.++...|+.
T Consensus 250 ~~~l~~~l~~ 259 (260)
T cd05070 250 FEYLQSFLED 259 (260)
T ss_pred HHHHHHHHhc
Confidence 9999988764
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-39 Score=303.75 Aligned_cols=231 Identities=19% Similarity=0.199 Sum_probs=187.0
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHH-HHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAK-AVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||.+.+. +..+++|++.... .....+..|.. +++.++||||+++++++...+..++||||++||+|..
T Consensus 6 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~ 85 (323)
T cd05575 6 GSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNGGELFF 85 (323)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCCCCHHH
Confidence 899999999984 6778888875432 12334555555 5677899999999999999999999999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccc
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAF 150 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y 150 (423)
++.+ ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....||+.|
T Consensus 86 ~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~g-ivH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y 162 (323)
T cd05575 86 HLQR--ERSFPEPRARFYAAEIASALGYLHSLN-IIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCGTPEY 162 (323)
T ss_pred HHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccccccCChhh
Confidence 8864 457999999999999999999999999 999999999999999999999999998753322 234689999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcC
Q 014484 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (423)
Q Consensus 151 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (423)
+|||++.+..++.++|||||||++|+|++|..||......... ...... ....+...+.++.++|.+||+.||.
T Consensus 163 ~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~----~~i~~~--~~~~~~~~~~~~~~li~~~l~~~p~ 236 (323)
T cd05575 163 LAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMY----DNILNK--PLRLKPNISVSARHLLEGLLQKDRT 236 (323)
T ss_pred cChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHH----HHHHcC--CCCCCCCCCHHHHHHHHHHhhcCHH
Confidence 9999999889999999999999999999999988764222111 111111 1123345578899999999999999
Q ss_pred CCCCH----HHHHHH
Q 014484 231 ERPNA----KSLVIS 241 (423)
Q Consensus 231 ~Rps~----~~vl~~ 241 (423)
+||++ .+++.|
T Consensus 237 ~R~~~~~~~~~il~~ 251 (323)
T cd05575 237 KRLGAKDDFLEIKNH 251 (323)
T ss_pred hCCCCCCCHHHHHcC
Confidence 99987 466655
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-39 Score=296.11 Aligned_cols=237 Identities=16% Similarity=0.195 Sum_probs=192.0
Q ss_pred CCCCccceeeeec-------ceeeeeecCCCh--hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICWFH-------CHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~~~-------~~~~~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 72 (423)
|+||.||.+.+.+ ..+++|.+.... .....+.+|+.++..++||||+++++++......++++||+.+++|
T Consensus 16 G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~e~~~~~~l 95 (283)
T cd05091 16 DRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMIFSYCSHSDL 95 (283)
T ss_pred CCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEEEEcCCCCcH
Confidence 8999999998742 457777775433 2346788999999999999999999999999999999999999999
Q ss_pred HhhhccC--------------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccC
Q 014484 73 AKHLFHW--------------ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNS 138 (423)
Q Consensus 73 ~~~i~~~--------------~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 138 (423)
.+++... ....+++..+..++.|++.||.|||+++ ++||||||+||++++++.+||+|||+++..
T Consensus 96 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 174 (283)
T cd05091 96 HEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH-VVHKDLATRNVLVFDKLNVKISDLGLFREV 174 (283)
T ss_pred HHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC-ccccccchhheEecCCCceEeccccccccc
Confidence 9998421 1235888999999999999999999999 999999999999999999999999998765
Q ss_pred CCCC------ccccCcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCCh
Q 014484 139 RDGK------SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSN 211 (423)
Q Consensus 139 ~~~~------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (423)
.... ...+++.|+|||.+.+..++.++|||||||++|||++ |..|+..... ......+........+.
T Consensus 175 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-----~~~~~~i~~~~~~~~~~ 249 (283)
T cd05091 175 YAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN-----QDVIEMIRNRQVLPCPD 249 (283)
T ss_pred ccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHHHHcCCcCCCCC
Confidence 4322 2234678999999988889999999999999999998 6666654321 11222222222334456
Q ss_pred hHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHh
Q 014484 212 DEGTELVRLASRCLQSEARERPNAKSLVISLMS 244 (423)
Q Consensus 212 ~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~ 244 (423)
.++..+.+++.+||+.+|.+||++++++..|..
T Consensus 250 ~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 250 DCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred CCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 678889999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=295.45 Aligned_cols=241 Identities=22% Similarity=0.318 Sum_probs=190.3
Q ss_pred CCCCccceeeee------cceeeeeecCCCh--hhHHHHHHHHHHHhcCCCCCccceEeEEEeCC--ceeEEEecCCCCC
Q 014484 2 GGRCSKFSICWF------HCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEAD--ERLLVAEFMPNET 71 (423)
Q Consensus 2 G~~g~v~~~~~~------~~~~~~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv~e~~~~~~ 71 (423)
|+||.||.+.+. +..+++|++.... .....+.+|+++++.++||||+++++++...+ ..++||||+++++
T Consensus 15 g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~ 94 (283)
T cd05080 15 GHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIMEYVPLGS 94 (283)
T ss_pred CCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEEecCCCCCC
Confidence 899999876642 4457777765432 34567889999999999999999999987643 4789999999999
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC-------cc
Q 014484 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-------SY 144 (423)
Q Consensus 72 L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-------~~ 144 (423)
|.+++.. ..+++.+++.++.|++.||.|||+++ ++||||||+||+++.++.++|+|||+++...... ..
T Consensus 95 l~~~~~~---~~l~~~~~~~i~~~l~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 170 (283)
T cd05080 95 LRDYLPK---HKLNLAQLLLFAQQICEGMAYLHSQH-YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDG 170 (283)
T ss_pred HHHHHHH---cCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccChheEEEcCCCcEEEeecccccccCCcchhhccCCCC
Confidence 9999853 45999999999999999999999999 9999999999999999999999999987654322 12
Q ss_pred ccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHH----------hhhchhhhhccccccCCCChhHH
Q 014484 145 STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDL----------IRSKNFLLLMDSALEGHFSNDEG 214 (423)
Q Consensus 145 ~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~ 214 (423)
.++..|+|||.+.+..++.++|||||||++++|++|..|+....... ..................+..++
T Consensus 171 ~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (283)
T cd05080 171 DSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCP 250 (283)
T ss_pred CCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCCCCCCCCCC
Confidence 34567999999988889999999999999999999998764321110 00011111111222223345567
Q ss_pred HHHHHHHHHhcccCcCCCCCHHHHHHHHHhhh
Q 014484 215 TELVRLASRCLQSEARERPNAKSLVISLMSLQ 246 (423)
Q Consensus 215 ~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~~ 246 (423)
.++.+++.+||+.||++|||+++++..|+.+.
T Consensus 251 ~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 251 QEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred HHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 89999999999999999999999999988753
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-39 Score=317.18 Aligned_cols=238 Identities=16% Similarity=0.156 Sum_probs=195.0
Q ss_pred CCCCccceeeee--cceeeeeecCC-ChhhHHHHHHHHHHHhcCC-CCCccceEeE-EEeC------CceeEEEecCCCC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLES-SDLGETLNLEEAKAVGNLR-SERLANLIGC-CYEA------DERLLVAEFMPNE 70 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~niv~~~~~-~~~~------~~~~lv~e~~~~~ 70 (423)
|||+.||.+... +..++.|++.. .........+||++|+.|+ |+|||.+++. .... -+++|.||||.||
T Consensus 48 GGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~EvllLmEyC~gg 127 (738)
T KOG1989|consen 48 GGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVLLLMEYCKGG 127 (738)
T ss_pred CCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEEeehhhccCC
Confidence 999999999986 36777766543 5556778899999999995 9999999993 3221 2468999999999
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCC-eeeccCCCCCeeecCCCCeEEccccccccCCCCC-------
Q 014484 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGR-ALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK------- 142 (423)
Q Consensus 71 ~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~-iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~------- 142 (423)
.|-+++..+....|++.++++|+.++|+|+.+||...+ |||||||-+||||+.+|+.||||||.+.......
T Consensus 128 ~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~~~~e~~ 207 (738)
T KOG1989|consen 128 SLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKILSPTSAQEVN 207 (738)
T ss_pred cHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCcccccccccCCCccHHHHH
Confidence 99999986566679999999999999999999999864 9999999999999999999999999876433221
Q ss_pred ------ccccCcccCCcccc---ccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhH
Q 014484 143 ------SYSTNLAFTPPEYM---RTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDE 213 (423)
Q Consensus 143 ------~~~~t~~y~aPE~~---~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (423)
...+|+.|+|||.+ .+.+++.|+|||+|||+||.|+....||...+. ..++.....-+..+.+
T Consensus 208 ~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~--------laIlng~Y~~P~~p~y 279 (738)
T KOG1989|consen 208 YVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK--------LAILNGNYSFPPFPNY 279 (738)
T ss_pred HHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc--------eeEEeccccCCCCccH
Confidence 12468999999965 477899999999999999999999999876421 1223333333333578
Q ss_pred HHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhh
Q 014484 214 GTELVRLASRCLQSEARERPNAKSLVISLMSLQK 247 (423)
Q Consensus 214 ~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~~~ 247 (423)
+..+.+||..||+.||.+||++-+++..+..+..
T Consensus 280 s~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~ 313 (738)
T KOG1989|consen 280 SDRLKDLIRTMLQPNPDERPNIYQVLEEIFELAN 313 (738)
T ss_pred HHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhc
Confidence 9999999999999999999999999999877664
|
|
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-39 Score=294.95 Aligned_cols=236 Identities=19% Similarity=0.290 Sum_probs=190.5
Q ss_pred CCCCccceeeeec-------ceeeeeecCCC--hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICWFH-------CHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~~~-------~~~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 72 (423)
|+||.||.+.+.. ..+++|.+... ......+.+|+.+++.++|+||+++++++.+.+..++||||++|++|
T Consensus 17 g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L 96 (277)
T cd05036 17 GAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFILLELMAGGDL 96 (277)
T ss_pred CCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcEEEEecCCCCCH
Confidence 8999999998854 45666665432 33355789999999999999999999999999999999999999999
Q ss_pred HhhhccCC-----CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCC---CeEEccccccccCCCCC--
Q 014484 73 AKHLFHWE-----TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG---NPRLSSFGLMKNSRDGK-- 142 (423)
Q Consensus 73 ~~~i~~~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~---~~kl~Dfg~~~~~~~~~-- 142 (423)
.+++.... ...+++..+..++.||+.||.|||+++ ++||||||+||+++.++ .++|+|||+++......
T Consensus 97 ~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~ 175 (277)
T cd05036 97 KSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH-FIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYY 175 (277)
T ss_pred HHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccchheEEEeccCCCcceEeccCccccccCCccce
Confidence 99986432 125899999999999999999999999 99999999999998765 58999999988663321
Q ss_pred ----ccccCcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHH
Q 014484 143 ----SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTEL 217 (423)
Q Consensus 143 ----~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 217 (423)
....+..|+|||++.+..++.++|||||||++|+|++ |..||...... .....+........+..++..+
T Consensus 176 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 250 (277)
T cd05036 176 RKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ-----EVMEFVTGGGRLDPPKGCPGPV 250 (277)
T ss_pred ecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH-----HHHHHHHcCCcCCCCCCCCHHH
Confidence 1223467999999998889999999999999999997 87777653211 1222222222334455677889
Q ss_pred HHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 218 VRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 218 ~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
.+++.+||+.+|++|||+.+++++|.
T Consensus 251 ~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 251 YRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred HHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 99999999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=292.12 Aligned_cols=232 Identities=19% Similarity=0.297 Sum_probs=185.5
Q ss_pred CCCCccceeeee--------------cceeeeeecCCChhh-HHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEec
Q 014484 2 GGRCSKFSICWF--------------HCHLKSSVLESSDLG-ETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEF 66 (423)
Q Consensus 2 G~~g~v~~~~~~--------------~~~~~~~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 66 (423)
|+||.||.+.+. ...+++|++...... ...+.+|+.++..++||||+++++++..+...++||||
T Consensus 6 G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 85 (262)
T cd05077 6 GTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENIMVEEF 85 (262)
T ss_pred CCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCEEEEec
Confidence 899999999853 123566666554433 45778899999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCC-------eEEccccccccCC
Q 014484 67 MPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGN-------PRLSSFGLMKNSR 139 (423)
Q Consensus 67 ~~~~~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~-------~kl~Dfg~~~~~~ 139 (423)
+++++|..++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++. ++++|||++....
T Consensus 86 ~~~~~l~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~ 163 (262)
T cd05077 86 VEFGPLDLFMHR-KSDVLTTPWKFKVAKQLASALSYLEDKD-LVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVL 163 (262)
T ss_pred ccCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHhhhCC-eECCCCCcccEEEecCCccCCCCceeEeCCCCCCcccc
Confidence 999999988853 3456899999999999999999999999 999999999999987664 8999999988776
Q ss_pred CCCccccCcccCCccccc-cCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHH
Q 014484 140 DGKSYSTNLAFTPPEYMR-TGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTEL 217 (423)
Q Consensus 140 ~~~~~~~t~~y~aPE~~~-~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 217 (423)
......++..|+|||.+. +..++.++|||||||++|+|++ |..|+........ ........ ......+.++
T Consensus 164 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~-----~~~~~~~~--~~~~~~~~~~ 236 (262)
T cd05077 164 SRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEK-----ERFYEGQC--MLVTPSCKEL 236 (262)
T ss_pred CcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHH-----HHHHhcCc--cCCCCChHHH
Confidence 666667889999999887 4568999999999999999984 6666544321111 11111111 1222345789
Q ss_pred HHHHHHhcccCcCCCCCHHHHHHHH
Q 014484 218 VRLASRCLQSEARERPNAKSLVISL 242 (423)
Q Consensus 218 ~~li~~cl~~dp~~Rps~~~vl~~l 242 (423)
.+++.+||+.||.+||++.+++.++
T Consensus 237 ~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 237 ADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred HHHHHHHcCCChhhCcCHHHHHHhc
Confidence 9999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-38 Score=291.21 Aligned_cols=234 Identities=18% Similarity=0.257 Sum_probs=195.3
Q ss_pred CCCCccceeeee--cceeeeeecCC---ChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLES---SDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
|++|.||++.+. +..++++.+.. .......+.+|+++++.++||||+++++++..++..++||||++|++|.+++
T Consensus 11 g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l 90 (256)
T cd08529 11 GSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYAENGDLHKLL 90 (256)
T ss_pred CCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeCCCCcHHHHH
Confidence 889999999884 56677776643 2345678889999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC----ccccCcccCC
Q 014484 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK----SYSTNLAFTP 152 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~----~~~~t~~y~a 152 (423)
....+..+++..++.++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||+++...... ...++..|+|
T Consensus 91 ~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~-i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~a 169 (256)
T cd08529 91 KMQRGRPLPEDQVWRFFIQILLGLAHLHSKK-ILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLS 169 (256)
T ss_pred HHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCcceEEEeCCCCEEEcccccceeccCccchhhccccCccccC
Confidence 7654567999999999999999999999999 9999999999999999999999999987655432 2357889999
Q ss_pred ccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCC
Q 014484 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (423)
Q Consensus 153 PE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (423)
||++.+..++.++|+|||||++++|++|..||........ ..... .......+..++.++.+++.+||+.+|++|
T Consensus 170 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R 244 (256)
T cd08529 170 PELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGAL----ILKII-RGVFPPVSQMYSQQLAQLIDQCLTKDYRQR 244 (256)
T ss_pred HHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHH-cCCCCCCccccCHHHHHHHHHHccCCcccC
Confidence 9999988899999999999999999999988865432111 11111 122223344567889999999999999999
Q ss_pred CCHHHHHHH
Q 014484 233 PNAKSLVIS 241 (423)
Q Consensus 233 ps~~~vl~~ 241 (423)
|++.+++.+
T Consensus 245 p~~~~ll~~ 253 (256)
T cd08529 245 PDTFQLLRN 253 (256)
T ss_pred cCHHHHhhC
Confidence 999999876
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-39 Score=305.51 Aligned_cols=237 Identities=18% Similarity=0.212 Sum_probs=189.4
Q ss_pred CCCCccceeee-----ecceeeeeecCCCh-----hhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCC
Q 014484 2 GGRCSKFSICW-----FHCHLKSSVLESSD-----LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNE 70 (423)
Q Consensus 2 G~~g~v~~~~~-----~~~~~~~~~~~~~~-----~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~ 70 (423)
|+||.||.+.. .+..+++|++.... ...+.+..|+.++..+ +|+||+++++++..++..++||||++||
T Consensus 11 G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~g 90 (332)
T cd05614 11 GAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLHLILDYVSGG 90 (332)
T ss_pred cCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEEEEEeCCCCC
Confidence 89999998875 25667777765422 2345677899999999 5999999999999999999999999999
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-----Cccc
Q 014484 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYS 145 (423)
Q Consensus 71 ~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~ 145 (423)
+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.++|+|||+++..... ....
T Consensus 91 ~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~~~~~~~~ 167 (332)
T cd05614 91 EMFTHLYQ--RDNFSEDEVRFYSGEIILALEHLHKLG-IVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKERTYSFC 167 (332)
T ss_pred cHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cEecCCCHHHeEECCCCCEEEeeCcCCccccccCCCcccccc
Confidence 99999853 456999999999999999999999999 999999999999999999999999998754322 2346
Q ss_pred cCcccCCccccccCC-CCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHh
Q 014484 146 TNLAFTPPEYMRTGR-VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRC 224 (423)
Q Consensus 146 ~t~~y~aPE~~~~~~-~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 224 (423)
||+.|+|||.+.+.. ++.++|||||||++|||++|..||................. .....++..+++.+.+++.+|
T Consensus 168 gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~ 245 (332)
T cd05614 168 GTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRIL--KCDPPFPSFIGPEAQDLLHKL 245 (332)
T ss_pred CCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHh--cCCCCCCCCCCHHHHHHHHHH
Confidence 899999999988654 78899999999999999999998854211101000011111 112234455678899999999
Q ss_pred cccCcCCCC-----CHHHHHHHHH
Q 014484 225 LQSEARERP-----NAKSLVISLM 243 (423)
Q Consensus 225 l~~dp~~Rp-----s~~~vl~~l~ 243 (423)
|+.||++|| +++++++|.+
T Consensus 246 l~~dp~~R~~~~~~~~~~~l~h~~ 269 (332)
T cd05614 246 LRKDPKKRLGAGPQGASEIKEHPF 269 (332)
T ss_pred cCCCHHHcCCCCCCCHHHHHcCCC
Confidence 999999999 7889988743
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-38 Score=296.18 Aligned_cols=241 Identities=18% Similarity=0.227 Sum_probs=192.1
Q ss_pred CCCCccceeeeec----ceeeeeecCC--ChhhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWFH----CHLKSSVLES--SDLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~~----~~~~~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
||||.||.+.+.. ..++++.+.. .......+.+|+.++.++ +||||+++++++...+..++||||+++++|.+
T Consensus 13 g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~ 92 (297)
T cd05089 13 GNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAIEYAPYGNLLD 92 (297)
T ss_pred CCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEEEecCCCcHHH
Confidence 8999999998742 2345555543 233456788999999999 79999999999999999999999999999999
Q ss_pred hhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCC
Q 014484 75 HLFHWE--------------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD 140 (423)
Q Consensus 75 ~i~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 140 (423)
++.... ...+++..++.++.|++.||+|||+++ ++||||||+||+++.++.++|+|||++.....
T Consensus 93 ~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~-ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~ 171 (297)
T cd05089 93 FLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ-FIHRDLAARNVLVGENLASKIADFGLSRGEEV 171 (297)
T ss_pred HHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCcCCcceEEECCCCeEEECCcCCCccccc
Confidence 985421 135889999999999999999999999 99999999999999999999999999864332
Q ss_pred C---CccccCcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHH
Q 014484 141 G---KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTE 216 (423)
Q Consensus 141 ~---~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (423)
. .....+..|+|||.+.+..++.++|||||||++|+|++ |..||........ ............+..++.+
T Consensus 172 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 246 (297)
T cd05089 172 YVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAEL-----YEKLPQGYRMEKPRNCDDE 246 (297)
T ss_pred eeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHH-----HHHHhcCCCCCCCCCCCHH
Confidence 1 11223457999999988889999999999999999997 8888765422211 1111222222344456788
Q ss_pred HHHHHHHhcccCcCCCCCHHHHHHHHHhhhhh
Q 014484 217 LVRLASRCLQSEARERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 217 l~~li~~cl~~dp~~Rps~~~vl~~l~~~~~~ 248 (423)
+.+++.+||+.+|.+|||++++++.|..+...
T Consensus 247 ~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~ 278 (297)
T cd05089 247 VYELMRQCWRDRPYERPPFAQISVQLSRMLEA 278 (297)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999887654
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-38 Score=291.72 Aligned_cols=239 Identities=18% Similarity=0.225 Sum_probs=190.2
Q ss_pred CCCCccceeeeec----ceeeeeecCC--ChhhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWFH----CHLKSSVLES--SDLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~~----~~~~~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||.+.+.. ..++++.+.. .......+.+|++++.++ +||||+++++++...+..++||||+++++|.+
T Consensus 6 g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~ 85 (270)
T cd05047 6 GNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD 85 (270)
T ss_pred CCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCCcHHH
Confidence 8999999998753 2345565543 233456788999999999 89999999999999999999999999999999
Q ss_pred hhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCC
Q 014484 75 HLFHWE--------------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD 140 (423)
Q Consensus 75 ~i~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 140 (423)
++.... ...+++.++..++.|++.||.|||+++ ++||||||+||+++.++.++|+|||++.....
T Consensus 86 ~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~-i~H~dikp~nili~~~~~~kl~dfgl~~~~~~ 164 (270)
T cd05047 86 FLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNILVGENYVAKIADFGLSRGQEV 164 (270)
T ss_pred HHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccccceEEEcCCCeEEECCCCCccccch
Confidence 986421 124789999999999999999999999 99999999999999999999999999864332
Q ss_pred C---CccccCcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHH
Q 014484 141 G---KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTE 216 (423)
Q Consensus 141 ~---~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (423)
. .....+..|+|||++.+..++.++|||||||++++|++ |..||...... ..............+...+.+
T Consensus 165 ~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 239 (270)
T cd05047 165 YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-----ELYEKLPQGYRLEKPLNCDDE 239 (270)
T ss_pred hhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHH-----HHHHHHhCCCCCCCCCcCCHH
Confidence 1 11223567999999988889999999999999999997 88777543211 111112222222334456678
Q ss_pred HHHHHHHhcccCcCCCCCHHHHHHHHHhhh
Q 014484 217 LVRLASRCLQSEARERPNAKSLVISLMSLQ 246 (423)
Q Consensus 217 l~~li~~cl~~dp~~Rps~~~vl~~l~~~~ 246 (423)
+.+++.+||..||.+|||+.+++..|..+.
T Consensus 240 ~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 240 VYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred HHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 999999999999999999999999987653
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-39 Score=309.70 Aligned_cols=233 Identities=17% Similarity=0.161 Sum_probs=188.2
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||++... +..+++|++.... .....+.+|++++.+++||||+++++++.+++..|+||||++||+|.++
T Consensus 12 G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~ 91 (382)
T cd05625 12 GAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSL 91 (382)
T ss_pred CCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEeCCCCCcHHHH
Confidence 899999999874 5667888775533 2345678899999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCC---------------
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD--------------- 140 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~--------------- 140 (423)
+.+ .+.+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.++|+|||++.....
T Consensus 92 l~~--~~~~~e~~~~~~~~qi~~al~~lH~~~-ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~ 168 (382)
T cd05625 92 LIR--MGIFPEDLARFYIAELTCAVESVHKMG-FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQ 168 (382)
T ss_pred HHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEEeECCCCcccccccccccccccccccc
Confidence 864 356899999999999999999999999 99999999999999999999999998742210
Q ss_pred ------------------------------------CCccccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCC
Q 014484 141 ------------------------------------GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184 (423)
Q Consensus 141 ------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~ 184 (423)
.....||+.|+|||++.+..++.++|||||||++|||++|..||
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf 248 (382)
T cd05625 169 DSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPF 248 (382)
T ss_pred ccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHHHhCCCCC
Confidence 01235889999999999889999999999999999999999998
Q ss_pred CchhhHHhhhchhhhhcc--ccccCCCChhHHHHHHHHHHHhcccCcCCCCC---HHHHHHHH
Q 014484 185 PSHALDLIRSKNFLLLMD--SALEGHFSNDEGTELVRLASRCLQSEARERPN---AKSLVISL 242 (423)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps---~~~vl~~l 242 (423)
....... ....... ...........++++.++|.+|+ .+|.+|++ +++++.|-
T Consensus 249 ~~~~~~~----~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp 306 (382)
T cd05625 249 LAQTPLE----TQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAHP 306 (382)
T ss_pred CCCCHHH----HHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCC
Confidence 7642211 1111111 11111122345788999999986 59999987 89988774
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-39 Score=306.64 Aligned_cols=235 Identities=17% Similarity=0.171 Sum_probs=191.4
Q ss_pred CCCCccceeeee--cceeeeeecCCChh----hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDL----GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||++.+. +..+++|++..... ....+.+|+.++..++|+||+++++++.+.+..++||||++|++|.++
T Consensus 12 G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 91 (330)
T cd05601 12 GHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVMEYQPGGDLLSL 91 (330)
T ss_pred ccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEECCCCCCCHHHH
Confidence 899999999874 66788887765432 455678899999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC-----ccccCccc
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-----SYSTNLAF 150 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-----~~~~t~~y 150 (423)
+.+. ...+++..+..++.|++.||.|||+++ |+||||||+||+++.++.++|+|||++....... ...||+.|
T Consensus 92 l~~~-~~~l~~~~~~~~~~qi~~aL~~lH~~~-i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y 169 (330)
T cd05601 92 LNRY-EDQFDEDMAQFYLAELVLAIHSVHQMG-YVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNSKLPVGTPDY 169 (330)
T ss_pred HHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEcccCchHheEECCCCCEEeccCCCCeECCCCCceeeecccCCccc
Confidence 9652 357999999999999999999999999 9999999999999999999999999997654332 23588999
Q ss_pred CCccccc------cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCC--ChhHHHHHHHHHH
Q 014484 151 TPPEYMR------TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHF--SNDEGTELVRLAS 222 (423)
Q Consensus 151 ~aPE~~~------~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~ 222 (423)
+|||++. ...++.++|||||||++|+|++|..||........ ...+........+ ....+.++.+++.
T Consensus 170 ~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~~~~~~~li~ 245 (330)
T cd05601 170 IAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKT----YNNIMNFQRFLKFPEDPKVSSDFLDLIQ 245 (330)
T ss_pred cCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHH----HHHHHcCCCccCCCCCCCCCHHHHHHHH
Confidence 9999986 45678999999999999999999999865422211 1111111111112 2245788999999
Q ss_pred HhcccCcCCCCCHHHHHHHHH
Q 014484 223 RCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 223 ~cl~~dp~~Rps~~~vl~~l~ 243 (423)
+||+ +|.+|||+++++.|-.
T Consensus 246 ~ll~-~p~~R~t~~~l~~h~~ 265 (330)
T cd05601 246 SLLC-GQKERLGYEGLCCHPF 265 (330)
T ss_pred HHcc-ChhhCCCHHHHhCCCC
Confidence 9998 9999999999998743
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-39 Score=307.67 Aligned_cols=234 Identities=16% Similarity=0.187 Sum_probs=189.3
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.+. +..+++|++.... .....+.+|+.++..++||||+++++++.+++..|+||||++||+|.++
T Consensus 54 G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~ 133 (370)
T cd05621 54 GAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNL 133 (370)
T ss_pred cCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEcCCCCCcHHHH
Confidence 899999999885 5667777765422 2345678999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-----CccccCccc
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYSTNLAF 150 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~~t~~y 150 (423)
+. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++...... ....||+.|
T Consensus 134 l~---~~~~~~~~~~~~~~qil~aL~~LH~~~-IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~~~~~gt~~Y 209 (370)
T cd05621 134 MS---NYDVPEKWAKFYTAEVVLALDAIHSMG-LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVRCDTAVGTPDY 209 (370)
T ss_pred HH---hcCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHEEECCCCCEEEEecccceecccCCceecccCCCCccc
Confidence 84 345899999999999999999999999 999999999999999999999999999865432 245689999
Q ss_pred CCccccccCC----CCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCCh--hHHHHHHHHHHHh
Q 014484 151 TPPEYMRTGR----VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSN--DEGTELVRLASRC 224 (423)
Q Consensus 151 ~aPE~~~~~~----~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~li~~c 224 (423)
+|||++.+.. ++.++||||+||++|+|++|..||...... .....+........++. ..+..+.+++.+|
T Consensus 210 ~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~----~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~~ 285 (370)
T cd05621 210 ISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLV----GTYSKIMDHKNSLNFPEDVEISKHAKNLICAF 285 (370)
T ss_pred CCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHH----HHHHHHHhCCcccCCCCcccCCHHHHHHHHHH
Confidence 9999987543 788999999999999999999998764321 11222222211122222 4578899999999
Q ss_pred cccCcCC--CCCHHHHHHHHH
Q 014484 225 LQSEARE--RPNAKSLVISLM 243 (423)
Q Consensus 225 l~~dp~~--Rps~~~vl~~l~ 243 (423)
|+.++.+ |+|+.++++|.+
T Consensus 286 L~~~~~r~~R~~~~e~l~hp~ 306 (370)
T cd05621 286 LTDREVRLGRNGVEEIKQHPF 306 (370)
T ss_pred ccCchhccCCCCHHHHhcCcc
Confidence 9865543 899999999854
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=301.33 Aligned_cols=228 Identities=20% Similarity=0.216 Sum_probs=183.8
Q ss_pred CCCCccceeeee--cceeeeeecCCChh----hHHHHHHHHH-HHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDL----GETLNLEEAK-AVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~----~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||++.+. +..+++|++..... ....+..|.. +++.++||||+++++++...+..++||||++|++|.+
T Consensus 6 G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~ 85 (325)
T cd05602 6 GSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFY 85 (325)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCCCcHHH
Confidence 899999999885 45677777654321 2234444444 5678899999999999999999999999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCC----CCccccCccc
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNLAF 150 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~~t~~y 150 (423)
++.. ...+++..+..++.||+.||.|||++| |+||||||+|||++.++.++|+|||+++.... .....||+.|
T Consensus 86 ~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~g-iiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y 162 (325)
T cd05602 86 HLQR--ERCFLEPRARFYAAEIASALGYLHSLN-IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCGTPEY 162 (325)
T ss_pred HHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcccccCCccc
Confidence 9854 456889999999999999999999999 99999999999999999999999999875332 2335689999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcC
Q 014484 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (423)
Q Consensus 151 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (423)
+|||++.+..++.++|||||||++|+|++|..||........ ....... ....++..+..+.++|.+||+.||.
T Consensus 163 ~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~----~~~i~~~--~~~~~~~~~~~~~~li~~~l~~~p~ 236 (325)
T cd05602 163 LAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEM----YDNILNK--PLQLKPNITNSARHLLEGLLQKDRT 236 (325)
T ss_pred cCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHH----HHHHHhC--CcCCCCCCCHHHHHHHHHHcccCHH
Confidence 999999988999999999999999999999999875432211 1111111 1123445678899999999999999
Q ss_pred CCCCHHHH
Q 014484 231 ERPNAKSL 238 (423)
Q Consensus 231 ~Rps~~~v 238 (423)
+||++.+.
T Consensus 237 ~R~~~~~~ 244 (325)
T cd05602 237 KRLGAKDD 244 (325)
T ss_pred HCCCCCCC
Confidence 99987743
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=290.24 Aligned_cols=235 Identities=21% Similarity=0.313 Sum_probs=191.6
Q ss_pred CCCCccceeeeec-----ceeeeeecCCChh--hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWFH-----CHLKSSVLESSDL--GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~~-----~~~~~~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||++.+.. ..+++|.+..... ..+.+.+|+.+++.++||||+++++++. .+..++||||+++++|.+
T Consensus 6 G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~~~L~~ 84 (257)
T cd05060 6 GNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPLGPLLK 84 (257)
T ss_pred cCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCCCcHHH
Confidence 8999999998853 4577777765554 4667899999999999999999999876 456899999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCCcc-------ccC
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY-------STN 147 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~-------~~t 147 (423)
++.. ...+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++........ .++
T Consensus 85 ~l~~--~~~~~~~~~~~~~~qi~~~l~~lh~~~-i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~ 161 (257)
T cd05060 85 YLKK--RREIPVSDLKELAHQVAMGMAYLESKH-FVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWP 161 (257)
T ss_pred HHHh--CCCCCHHHHHHHHHHHHHHHHHHhhcC-eeccCcccceEEEcCCCcEEeccccccceeecCCcccccccCcccc
Confidence 9964 336899999999999999999999999 999999999999999999999999998865433221 124
Q ss_pred cccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcc
Q 014484 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (423)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (423)
..|+|||.+.+..++.++|||||||++|+|++ |..||..... ......+........+..++..+.+++.+||.
T Consensus 162 ~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 236 (257)
T cd05060 162 LKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG-----AEVIAMLESGERLPRPEECPQEIYSIMLSCWK 236 (257)
T ss_pred ccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH-----HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhc
Confidence 57999999988889999999999999999998 8877654311 11222222222223445567889999999999
Q ss_pred cCcCCCCCHHHHHHHHHhh
Q 014484 227 SEARERPNAKSLVISLMSL 245 (423)
Q Consensus 227 ~dp~~Rps~~~vl~~l~~~ 245 (423)
.+|++|||+.++++.|...
T Consensus 237 ~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 237 YRPEDRPTFSELESTFRRD 255 (257)
T ss_pred CChhhCcCHHHHHHHHHhc
Confidence 9999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=278.56 Aligned_cols=210 Identities=19% Similarity=0.235 Sum_probs=178.1
Q ss_pred HHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCC
Q 014484 29 ETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKG 107 (423)
Q Consensus 29 ~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ 107 (423)
.+...+|+.+|+++ .||||+.+.++++.+..+++|+|.|+.|.|.+++. +.-.+++....+|++|+..|+.|||.++
T Consensus 66 ~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF~FlVFdl~prGELFDyLt--s~VtlSEK~tR~iMrqlfegVeylHa~~ 143 (411)
T KOG0599|consen 66 REATRQEISILRQVMGHPYIIDLQDVYESDAFVFLVFDLMPRGELFDYLT--SKVTLSEKETRRIMRQLFEGVEYLHARN 143 (411)
T ss_pred HHHHHHHHHHHHHhcCCCcEEEeeeeccCcchhhhhhhhcccchHHHHhh--hheeecHHHHHHHHHHHHHHHHHHHHhh
Confidence 45667899999999 79999999999999999999999999999999995 4567999999999999999999999999
Q ss_pred CeeeccCCCCCeeecCCCCeEEccccccccCCCCCc---cccCcccCCcccccc------CCCCCCcceehhHHHHHHHh
Q 014484 108 RALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS---YSTNLAFTPPEYMRT------GRVTPESVVYSFGTMLLDLL 178 (423)
Q Consensus 108 ~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~---~~~t~~y~aPE~~~~------~~~~~~~Di~slG~~l~el~ 178 (423)
||||||||+|||++++.+++|+|||++.....+.. .+||++|.|||.+.. ..|+...|+|++|+++|-|+
T Consensus 144 -IVHRDLKpENILlddn~~i~isDFGFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLL 222 (411)
T KOG0599|consen 144 -IVHRDLKPENILLDDNMNIKISDFGFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLL 222 (411)
T ss_pred -hhhcccChhheeeccccceEEeccceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHH
Confidence 99999999999999999999999999999887754 689999999998763 25889999999999999999
Q ss_pred hCCCCCCchhhHHhhhchhhhhccc--cccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhh
Q 014484 179 SGKHIPPSHALDLIRSKNFLLLMDS--ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 245 (423)
Q Consensus 179 ~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~ 245 (423)
.|.+||....+-.+. ..+... ....+--.+.+.+..++|.+||+.||.+|.|++|+++|..-.
T Consensus 223 aGcpPFwHRkQmlML----R~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~ 287 (411)
T KOG0599|consen 223 AGCPPFWHRKQMLML----RMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFFI 287 (411)
T ss_pred cCCCchhHHHHHHHH----HHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHHH
Confidence 999887654222111 111111 122222345788999999999999999999999999986543
|
|
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=295.38 Aligned_cols=240 Identities=18% Similarity=0.270 Sum_probs=194.4
Q ss_pred CCCCccceeeeec-------ceeeeeecCCCh--hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICWFH-------CHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~~~-------~~~~~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 72 (423)
|+||.||++.+.. ..++++.+.... .....+.+|+.++..++||||+++++.+..++..+++|||+.+++|
T Consensus 11 g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 90 (290)
T cd05045 11 GEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL 90 (290)
T ss_pred cCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEEEEecCCCCH
Confidence 8999999998742 346666654332 3356788999999999999999999999999999999999999999
Q ss_pred HhhhccC----------------------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEc
Q 014484 73 AKHLFHW----------------------ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLS 130 (423)
Q Consensus 73 ~~~i~~~----------------------~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~ 130 (423)
.+++... ....+++..++.++.|++.||.|||+++ ++||||||+||++++++.++|+
T Consensus 91 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-ivH~dikp~nill~~~~~~kl~ 169 (290)
T cd05045 91 RSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK-LVHRDLAARNVLVAEGRKMKIS 169 (290)
T ss_pred HHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC-eehhhhhhheEEEcCCCcEEec
Confidence 9987532 1235789999999999999999999999 9999999999999999999999
Q ss_pred cccccccCCCC------CccccCcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccc
Q 014484 131 SFGLMKNSRDG------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDS 203 (423)
Q Consensus 131 Dfg~~~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~ 203 (423)
|||+++..... ....++..|+|||.+.+..++.++|||||||++++|++ |..||...... .+......
T Consensus 170 dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-----~~~~~~~~ 244 (290)
T cd05045 170 DFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPE-----RLFNLLKT 244 (290)
T ss_pred cccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHH-----HHHHHHhC
Confidence 99998765332 12235678999999988889999999999999999998 88777653211 12222222
Q ss_pred cccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhh
Q 014484 204 ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQK 247 (423)
Q Consensus 204 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~~~ 247 (423)
......+..++.++.+++.+||+.+|++||++.+++..|+++..
T Consensus 245 ~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 245 GYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred CCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 22333445567889999999999999999999999999988754
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-40 Score=308.39 Aligned_cols=235 Identities=17% Similarity=0.209 Sum_probs=193.2
Q ss_pred CCCCccceeeeec--ceeeeeec-CCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICWFH--CHLKSSVL-ESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~~~--~~~~~~~~-~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
|+||.||+++... .-.+.|++ .++....++++-||++|..++||+||.+++.|...+.+|++.|||.||-.+..+.+
T Consensus 43 GAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~GGAVDaimlE 122 (1187)
T KOG0579|consen 43 GAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGGGAVDAIMLE 122 (1187)
T ss_pred ccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCCchHhHHHHH
Confidence 8999999999862 22233444 34455678999999999999999999999999999999999999999999888765
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCC----CCccccCcccCCcc
Q 014484 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNLAFTPPE 154 (423)
Q Consensus 79 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~~t~~y~aPE 154 (423)
-+..+++.++.-++.|++.||.|||+++ |||||||..|||++-+|.++|+|||.+..... ..++.||++|||||
T Consensus 123 -L~r~LtE~QIqvvc~q~ldALn~LHs~~-iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkRDsFIGTPYWMAPE 200 (1187)
T KOG0579|consen 123 -LGRVLTEDQIQVVCYQVLDALNWLHSQN-IIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKRDSFIGTPYWMAPE 200 (1187)
T ss_pred -hccccchHHHHHHHHHHHHHHHHHhhcc-hhhhhccccceEEEecCcEeeecccccccchhHHhhhccccCCcccccch
Confidence 4678999999999999999999999999 99999999999999999999999998765442 35678999999999
Q ss_pred ccc-----cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhcccccc-CCCChhHHHHHHHHHHHhcccC
Q 014484 155 YMR-----TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALE-GHFSNDEGTELVRLASRCLQSE 228 (423)
Q Consensus 155 ~~~-----~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~d 228 (423)
+.. +.+|+.++||||||++|.||..+.+|.... -....+.++...... -..|..++..+.+|+.+||.+|
T Consensus 201 VvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhel----npMRVllKiaKSePPTLlqPS~Ws~~F~DfLk~cL~Kn 276 (1187)
T KOG0579|consen 201 VVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHEL----NPMRVLLKIAKSEPPTLLQPSHWSRSFSDFLKRCLVKN 276 (1187)
T ss_pred heeeccccCCCchhhhhHHhhhhHHHHHhccCCCcccc----chHHHHHHHhhcCCCcccCcchhhhHHHHHHHHHHhcC
Confidence 764 567999999999999999999999665432 111222222221111 1235567889999999999999
Q ss_pred cCCCCCHHHHHHHH
Q 014484 229 ARERPNAKSLVISL 242 (423)
Q Consensus 229 p~~Rps~~~vl~~l 242 (423)
|..||++.++++|.
T Consensus 277 p~~Rp~aaqll~Hp 290 (1187)
T KOG0579|consen 277 PRNRPPAAQLLKHP 290 (1187)
T ss_pred CccCCCHHHHhhCc
Confidence 99999999999884
|
|
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-38 Score=292.56 Aligned_cols=240 Identities=17% Similarity=0.227 Sum_probs=189.7
Q ss_pred CCCCCccceeeee--cc----eeeeeecCCC--hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCH
Q 014484 1 MGGRCSKFSICWF--HC----HLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (423)
Q Consensus 1 ~G~~g~v~~~~~~--~~----~~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 72 (423)
-||||.||++.+. +. .+++|.+... ......+..|+..+..++||||+++++++.. ...++++||+++|+|
T Consensus 17 ~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~i~e~~~~gsL 95 (279)
T cd05111 17 SGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQLVTQLSPLGSL 95 (279)
T ss_pred ccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEEEEEeCCCCcH
Confidence 3899999999984 22 2445554332 2234567788889999999999999998864 457899999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC------Ccccc
Q 014484 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------KSYST 146 (423)
Q Consensus 73 ~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~------~~~~~ 146 (423)
.+++.. ..+.+++..+..|+.||+.||.|||+++ ++||||||+||+++.++.+||+|||+++..... ....+
T Consensus 96 ~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~ 173 (279)
T cd05111 96 LDHVRQ-HRDSLDPQRLLNWCVQIAKGMYYLEEHR-MVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKT 173 (279)
T ss_pred HHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-EeccccCcceEEEcCCCcEEEcCCccceeccCCCcccccCCCCC
Confidence 999964 3456899999999999999999999999 999999999999999999999999998765322 12345
Q ss_pred CcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhc
Q 014484 147 NLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCL 225 (423)
Q Consensus 147 t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 225 (423)
+..|+|||.+.+..++.++|||||||++|||++ |..|+...... .....+........+..++.++.+++.+||
T Consensus 174 ~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~li~~c~ 248 (279)
T cd05111 174 PIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH-----EVPDLLEKGERLAQPQICTIDVYMVMVKCW 248 (279)
T ss_pred cccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH-----HHHHHHHCCCcCCCCCCCCHHHHHHHHHHc
Confidence 678999999988889999999999999999998 88777653211 111222222222223345677899999999
Q ss_pred ccCcCCCCCHHHHHHHHHhhhhh
Q 014484 226 QSEARERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 226 ~~dp~~Rps~~~vl~~l~~~~~~ 248 (423)
..||+.|||+.++++.|..+.+.
T Consensus 249 ~~~p~~Rps~~el~~~l~~~~~~ 271 (279)
T cd05111 249 MIDENVRPTFKELANEFTRMARD 271 (279)
T ss_pred CCCcccCcCHHHHHHHHHHHHhC
Confidence 99999999999999999887765
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-38 Score=289.72 Aligned_cols=236 Identities=22% Similarity=0.293 Sum_probs=192.1
Q ss_pred CCCCccceeeeec-ceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccCC
Q 014484 2 GGRCSKFSICWFH-CHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80 (423)
Q Consensus 2 G~~g~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~ 80 (423)
|++|.||.+.+.+ ..+++|.+.........+.+|+++++.++|||++++++++. .+..++||||+.+++|.+++....
T Consensus 17 g~~~~v~~~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~ 95 (260)
T cd05069 17 GCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMGKGSLLDFLKEGD 95 (260)
T ss_pred cCCCeEEEEEEcCCceEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCCCCCHHHHHhhCC
Confidence 8999999998753 45777776655555678899999999999999999999885 456889999999999999997544
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC-----ccccCcccCCccc
Q 014484 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-----SYSTNLAFTPPEY 155 (423)
Q Consensus 81 ~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-----~~~~t~~y~aPE~ 155 (423)
...+++..+..++.|++.||.|||+.+ ++|+||||+||++++++.++|+|||++....... ...++..|+|||.
T Consensus 96 ~~~~~~~~~~~~~~~l~~al~~lH~~~-i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~ 174 (260)
T cd05069 96 GKYLKLPQLVDMAAQIADGMAYIERMN-YIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEA 174 (260)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCC-EeecccCcceEEEcCCCeEEECCCccceEccCCcccccCCCccchhhCCHHH
Confidence 556899999999999999999999999 9999999999999999999999999987654322 2234678999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCC
Q 014484 156 MRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (423)
Q Consensus 156 ~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (423)
..+..++.++|+||||+++|+|++ |..|+........ ... .........+...+..+.+++.+||..||.+||+
T Consensus 175 ~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~ 249 (260)
T cd05069 175 ALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREV----LEQ-VERGYRMPCPQGCPESLHELMKLCWKKDPDERPT 249 (260)
T ss_pred hccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH----HHH-HHcCCCCCCCcccCHHHHHHHHHHccCCcccCcC
Confidence 988889999999999999999999 7777765322111 111 1112222344556788999999999999999999
Q ss_pred HHHHHHHHHh
Q 014484 235 AKSLVISLMS 244 (423)
Q Consensus 235 ~~~vl~~l~~ 244 (423)
++++++.|+.
T Consensus 250 ~~~i~~~l~~ 259 (260)
T cd05069 250 FEYIQSFLED 259 (260)
T ss_pred HHHHHHHHhc
Confidence 9999998764
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=297.71 Aligned_cols=241 Identities=19% Similarity=0.297 Sum_probs=194.9
Q ss_pred CCCCccceeeeec---------ceeeeeecCCC--hhhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCC
Q 014484 2 GGRCSKFSICWFH---------CHLKSSVLESS--DLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPN 69 (423)
Q Consensus 2 G~~g~v~~~~~~~---------~~~~~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 69 (423)
|+||.||.+.+.+ ..+++|.+... ......+.+|+.++..+ +||||+++++++..++..++||||+++
T Consensus 29 G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 108 (307)
T cd05098 29 GCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 108 (307)
T ss_pred CCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEecCCC
Confidence 8999999987642 34677776543 23455788899999999 799999999999999999999999999
Q ss_pred CCHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEcccccc
Q 014484 70 ETLAKHLFHWE--------------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLM 135 (423)
Q Consensus 70 ~~L~~~i~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~ 135 (423)
++|.+++.... ...+++.++..++.|++.||.|||+++ ++||||||+||+++.++.++|+|||++
T Consensus 109 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g-i~H~dlkp~Nill~~~~~~kL~dfg~a 187 (307)
T cd05098 109 GNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK-CIHRDLAARNVLVTEDNVMKIADFGLA 187 (307)
T ss_pred CcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC-cccccccHHheEEcCCCcEEECCCccc
Confidence 99999996422 134889999999999999999999999 999999999999999999999999998
Q ss_pred ccCCCCC------ccccCcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCC
Q 014484 136 KNSRDGK------SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGH 208 (423)
Q Consensus 136 ~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (423)
+...... ...++..|+|||.+.+..++.++|+|||||++|+|++ |..|+...... .+...+.......
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~-----~~~~~~~~~~~~~ 262 (307)
T cd05098 188 RDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE-----ELFKLLKEGHRMD 262 (307)
T ss_pred ccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHH-----HHHHHHHcCCCCC
Confidence 7654321 1123468999999988889999999999999999998 77676543211 1222222222334
Q ss_pred CChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhhh
Q 014484 209 FSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 209 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~~~~ 248 (423)
.+...+.++.+++.+||..+|.+|||+.++++.|..+...
T Consensus 263 ~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~ 302 (307)
T cd05098 263 KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL 302 (307)
T ss_pred CCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence 4556678999999999999999999999999999987655
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-38 Score=291.53 Aligned_cols=238 Identities=20% Similarity=0.237 Sum_probs=188.0
Q ss_pred CCCCccceeeeec----ceeeeeecCCC---hhhHHHHHHHHHHHhcCCCCCccceEeEEEeC------CceeEEEecCC
Q 014484 2 GGRCSKFSICWFH----CHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEA------DERLLVAEFMP 68 (423)
Q Consensus 2 G~~g~v~~~~~~~----~~~~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~~~~lv~e~~~ 68 (423)
|+||.||.+.+.. ..+++|.+... ......+.+|++++..++|+||+++++++... ...++||||+.
T Consensus 10 G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~ 89 (272)
T cd05075 10 GEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVVILPFMK 89 (272)
T ss_pred ccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcEEEEEeCC
Confidence 8999999998753 24666665433 34466788999999999999999999987542 24689999999
Q ss_pred CCCHHhhhccC----CCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC--
Q 014484 69 NETLAKHLFHW----ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-- 142 (423)
Q Consensus 69 ~~~L~~~i~~~----~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-- 142 (423)
+|+|.+++... ....+++..+..++.|++.||.|||+++ |+||||||+||+++.++.++|+|||+++......
T Consensus 90 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 168 (272)
T cd05075 90 HGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS-FIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYY 168 (272)
T ss_pred CCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC-eeccccchhheEEcCCCCEEECCCCcccccCcccce
Confidence 99999887421 2345899999999999999999999999 9999999999999999999999999988654322
Q ss_pred ----ccccCcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHH
Q 014484 143 ----SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTEL 217 (423)
Q Consensus 143 ----~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 217 (423)
...+++.|++||.+.+..++.++|||||||++|+|++ |..||....... ....+........+..++..+
T Consensus 169 ~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 243 (272)
T cd05075 169 RQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSE-----IYDYLRQGNRLKQPPDCLDGL 243 (272)
T ss_pred ecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHH-----HHHHHHcCCCCCCCCCCCHHH
Confidence 2235678999999998889999999999999999999 677765432111 111111111122344567789
Q ss_pred HHHHHHhcccCcCCCCCHHHHHHHHHhh
Q 014484 218 VRLASRCLQSEARERPNAKSLVISLMSL 245 (423)
Q Consensus 218 ~~li~~cl~~dp~~Rps~~~vl~~l~~~ 245 (423)
.+++.+||+.||++|||+.++++.|..+
T Consensus 244 ~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 244 YSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred HHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 9999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-39 Score=306.75 Aligned_cols=242 Identities=14% Similarity=0.170 Sum_probs=197.8
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHHhcCC-C-----CCccceEeEEEeCCceeEEEecCCCCCHH
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNLR-S-----ERLANLIGCCYEADERLLVAEFMPNETLA 73 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h-----~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 73 (423)
|+||.|.+++++ +..|++|++.+.+.-...-..|+.+|..|+ | -|+|+++++|...+++|||+|.+.- +|.
T Consensus 197 GtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciVfELL~~-NLY 275 (586)
T KOG0667|consen 197 GSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIVFELLST-NLY 275 (586)
T ss_pred cccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceeeeehhhhh-hHH
Confidence 899999999986 788999999999887778889999999996 4 3699999999999999999999954 999
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCC--CeEEccccccccCCCCC-ccccCccc
Q 014484 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG--NPRLSSFGLMKNSRDGK-SYSTNLAF 150 (423)
Q Consensus 74 ~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~--~~kl~Dfg~~~~~~~~~-~~~~t~~y 150 (423)
++|+.+.-..++...+..++.||+.||.+||+.+ |||+||||+||||.+.+ .+||+|||.+....... +..-+..|
T Consensus 276 ellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~-IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~vytYiQSRfY 354 (586)
T KOG0667|consen 276 ELLKNNKFRGLSLPLVRKFAQQILTALLFLHELG-IIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRVYTYIQSRFY 354 (586)
T ss_pred HHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCChhheeeccCCcCceeEEecccccccCCcceeeeecccc
Confidence 9999888888999999999999999999999999 99999999999996544 69999999987666543 45568899
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhh--------------------chhhhh--------cc
Q 014484 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRS--------------------KNFLLL--------MD 202 (423)
Q Consensus 151 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~--------------------~~~~~~--------~~ 202 (423)
.|||++.|.+|+.+.|+||||||+.||++|.+.|++......-. ..+... ..
T Consensus 355 RAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~ 434 (586)
T KOG0667|consen 355 RAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVE 434 (586)
T ss_pred ccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeee
Confidence 99999999999999999999999999999999887652111000 000000 00
Q ss_pred c------------------cccCCCC-----------hhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhh
Q 014484 203 S------------------ALEGHFS-----------NDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 245 (423)
Q Consensus 203 ~------------------~~~~~~~-----------~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~ 245 (423)
. ......| ......+.+|+.+||.+||..|+|+.+.++|-.--
T Consensus 435 ~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~ 506 (586)
T KOG0667|consen 435 TSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPFLT 506 (586)
T ss_pred ecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCcccc
Confidence 0 0000011 12245689999999999999999999999996543
|
|
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-39 Score=297.58 Aligned_cols=238 Identities=17% Similarity=0.162 Sum_probs=182.8
Q ss_pred CCCCccceeeee---cceeeeeecCCCh---hhHHHHHHHHHHHhcC---CCCCccceEeEEEe-----CCceeEEEecC
Q 014484 2 GGRCSKFSICWF---HCHLKSSVLESSD---LGETLNLEEAKAVGNL---RSERLANLIGCCYE-----ADERLLVAEFM 67 (423)
Q Consensus 2 G~~g~v~~~~~~---~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~-----~~~~~lv~e~~ 67 (423)
|+||.||++.+. +..+++|.+.... .....+.+|+.++..+ +||||++++++|.. ....++||||+
T Consensus 12 G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~~~~lv~e~~ 91 (290)
T cd07862 12 GAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV 91 (290)
T ss_pred CCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCCcEEEEEccC
Confidence 899999999873 4557777664332 1234566788777766 69999999999863 34589999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC---Ccc
Q 014484 68 PNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSY 144 (423)
Q Consensus 68 ~~~~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~ 144 (423)
.+ +|.+++.......+++..+..++.|++.||.|||+++ |+||||||+|||++.++.++|+|||+++..... ...
T Consensus 92 ~~-~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~-iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 169 (290)
T cd07862 92 DQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR-VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSV 169 (290)
T ss_pred CC-CHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHHHEEEcCCCCEEEccccceEeccCCcccccc
Confidence 74 9999987555566999999999999999999999999 999999999999999999999999998765433 234
Q ss_pred ccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhc--------------cccc-----
Q 014484 145 STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLM--------------DSAL----- 205 (423)
Q Consensus 145 ~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~--------------~~~~----- 205 (423)
.+|+.|+|||.+.+..++.++|||||||++|||++|.+||................. ....
T Consensus 170 ~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (290)
T cd07862 170 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSA 249 (290)
T ss_pred cccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCC
Confidence 578999999999888899999999999999999999988865422111100000000 0000
Q ss_pred --cCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014484 206 --EGHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (423)
Q Consensus 206 --~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~ 241 (423)
.....+.+++.+.+++.+||+.||++|||+.++++|
T Consensus 250 ~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~h 287 (290)
T cd07862 250 QPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 287 (290)
T ss_pred CCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence 000112356778999999999999999999999976
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-39 Score=310.44 Aligned_cols=236 Identities=18% Similarity=0.180 Sum_probs=189.7
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+... +..+++|++.... .....+.+|++++..++||||+++++.+.+++..|+||||++||+|.++
T Consensus 12 G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~ 91 (376)
T cd05598 12 GAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSL 91 (376)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEeCCCCCcHHHH
Confidence 899999999874 6778888775432 2345678899999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCC---------------
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD--------------- 140 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~--------------- 140 (423)
+.. .+.+++..+..++.||+.||.|||+++ |+||||||+|||++.++.++|+|||++.....
T Consensus 92 i~~--~~~~~~~~~~~~~~qi~~al~~lH~~~-ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~ 168 (376)
T cd05598 92 LIR--LGIFEEDLARFYIAELTCAIESVHKMG-FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQ 168 (376)
T ss_pred HHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCCHHHEEECCCCCEEEEeCCCCcccccccccccccccccccc
Confidence 964 456899999999999999999999999 99999999999999999999999999742210
Q ss_pred --------------------------------CCccccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchh
Q 014484 141 --------------------------------GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHA 188 (423)
Q Consensus 141 --------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~ 188 (423)
.....||+.|+|||++.+..++.++|||||||++|+|++|..||....
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~ 248 (376)
T cd05598 169 DSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLADT 248 (376)
T ss_pred ccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhCCCCCCCCC
Confidence 012468999999999998899999999999999999999999987643
Q ss_pred hHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCC---CHHHHHHHHH
Q 014484 189 LDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERP---NAKSLVISLM 243 (423)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp---s~~~vl~~l~ 243 (423)
........ ..............+++++.++|.+|+ .+|.+|+ ++.++++|..
T Consensus 249 ~~~~~~~i--~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~ 303 (376)
T cd05598 249 PAETQLKV--INWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAHPF 303 (376)
T ss_pred HHHHHHHH--hccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCC
Confidence 22111110 000111111122346778999999977 5999999 9999998844
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-38 Score=301.41 Aligned_cols=234 Identities=18% Similarity=0.165 Sum_probs=200.5
Q ss_pred CCCCccceeeee--cceeeeeecCCChh----hHHHHHHHHHHHhcCC-CCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDL----GETLNLEEAKAVGNLR-SERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~----~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|.||.||.+... +..+++|++.+... ....+.+|+.+|+++. |||||.++++|++....++|||+|.||.|.+
T Consensus 46 G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lvmEL~~GGeLfd 125 (382)
T KOG0032|consen 46 GQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLVMELCEGGELFD 125 (382)
T ss_pred CCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEEEEecCCchHHH
Confidence 899999999985 67788888877665 3468899999999998 9999999999999999999999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCC----CCeEEccccccccCCCC---CccccC
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKD----GNPRLSSFGLMKNSRDG---KSYSTN 147 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~----~~~kl~Dfg~~~~~~~~---~~~~~t 147 (423)
.|.+. .+++..+..++.|++.+++|||+.| |+||||||+|+|+... +.++++|||++...... ...+||
T Consensus 126 ~i~~~---~~sE~da~~~~~~il~av~~lH~~g-vvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~~~~~~~Gt 201 (382)
T KOG0032|consen 126 RIVKK---HYSERDAAGIIRQILEAVKYLHSLG-VVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPGERLHTIVGT 201 (382)
T ss_pred HHHHc---cCCHHHHHHHHHHHHHHHHHHHhCC-ceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCCceEeeecCC
Confidence 99754 3999999999999999999999999 9999999999999543 47999999999987763 346799
Q ss_pred cccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccc--cccCCCChhHHHHHHHHHHHhc
Q 014484 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS--ALEGHFSNDEGTELVRLASRCL 225 (423)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~cl 225 (423)
+.|+|||++.+..|+..+|+||+|+++|.|++|.+||.......... .+... ......-..++..+.++|.+||
T Consensus 202 p~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~----~i~~~~~~f~~~~w~~is~~akd~i~~ll 277 (382)
T KOG0032|consen 202 PEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL----AILRGDFDFTSEPWDDISESAKDFIRKLL 277 (382)
T ss_pred ccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH----HHHcCCCCCCCCCccccCHHHHHHHHHhc
Confidence 99999999999999999999999999999999999998764332222 22222 2233334456889999999999
Q ss_pred ccCcCCCCCHHHHHHHHH
Q 014484 226 QSEARERPNAKSLVISLM 243 (423)
Q Consensus 226 ~~dp~~Rps~~~vl~~l~ 243 (423)
..||..|+|+.++++|.+
T Consensus 278 ~~dp~~R~ta~~~L~HpW 295 (382)
T KOG0032|consen 278 EFDPRKRLTAAQALQHPW 295 (382)
T ss_pred ccCcccCCCHHHHhcCcc
Confidence 999999999999999754
|
|
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-38 Score=293.20 Aligned_cols=236 Identities=19% Similarity=0.242 Sum_probs=188.7
Q ss_pred CCCCccceeeee-------cceeeeeecCCC-hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHH
Q 014484 2 GGRCSKFSICWF-------HCHLKSSVLESS-DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLA 73 (423)
Q Consensus 2 G~~g~v~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 73 (423)
||||.||.+... +..++++.+... ......+.+|++++..++|+||+++++++..++..+++|||+++++|.
T Consensus 16 g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 95 (280)
T cd05092 16 GAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMVFEYMRHGDLN 95 (280)
T ss_pred ccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEEEEecCCCCCHH
Confidence 899999988642 234555655433 344668999999999999999999999999999999999999999999
Q ss_pred hhhccCCC-------------CCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCC
Q 014484 74 KHLFHWET-------------QPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD 140 (423)
Q Consensus 74 ~~i~~~~~-------------~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 140 (423)
+++..... ..+++..+..++.|++.||.|||+++ ++||||||+||++++++.++|+|||++.....
T Consensus 96 ~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~-i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~ 174 (280)
T cd05092 96 RFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH-FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYS 174 (280)
T ss_pred HHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC-eecccccHhhEEEcCCCCEEECCCCceeEcCC
Confidence 99864321 35889999999999999999999999 99999999999999999999999999875432
Q ss_pred C------CccccCcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhH
Q 014484 141 G------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDE 213 (423)
Q Consensus 141 ~------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (423)
. ....+++.|+|||.+.+..++.++|||||||++|+|++ |.+||....... .............+..+
T Consensus 175 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~ 249 (280)
T cd05092 175 TDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTE-----AIECITQGRELERPRTC 249 (280)
T ss_pred CceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHH-----HHHHHHcCccCCCCCCC
Confidence 2 12234678999999998889999999999999999998 777764432111 11111111222334456
Q ss_pred HHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 214 GTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 214 ~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
++.+.+++.+||+.||.+||++.+++..|.
T Consensus 250 ~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 250 PPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred CHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 788999999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-39 Score=302.04 Aligned_cols=231 Identities=18% Similarity=0.259 Sum_probs=189.1
Q ss_pred CCCCccceeeee--cceeeeeecCCC----hhhHHHHHHHHHHHhcCCCC-CccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS----DLGETLNLEEAKAVGNLRSE-RLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~----~~~~~~~~~E~~~l~~l~h~-niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||++.+. +..+++|++... ......+..|++++..+.|+ +|+.+++++...+..|+||||++||+|.+
T Consensus 11 G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~ 90 (324)
T cd05587 11 GSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMY 90 (324)
T ss_pred ccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEcCCCCCcHHH
Confidence 899999999885 456888877543 23455778899999999765 58899999999999999999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCC----CCccccCccc
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNLAF 150 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~~t~~y 150 (423)
++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.++|+|||+++.... .....||+.|
T Consensus 91 ~~~~--~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y 167 (324)
T cd05587 91 HIQQ--VGKFKEPHAVFYAAEIAIGLFFLHSKG-IIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTTRTFCGTPDY 167 (324)
T ss_pred HHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCceeeecCCccc
Confidence 9853 456899999999999999999999999 99999999999999999999999999874322 1234689999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcC
Q 014484 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (423)
Q Consensus 151 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (423)
+|||++.+..++.++||||+||++|+|++|..||........ ...... ....++...++++.+++.+||..||.
T Consensus 168 ~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~----~~~i~~--~~~~~~~~~~~~~~~li~~~l~~~P~ 241 (324)
T cd05587 168 IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDEL----FQSIME--HNVSYPKSLSKEAVSICKGLLTKHPA 241 (324)
T ss_pred cChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHH----HHHHHc--CCCCCCCCCCHHHHHHHHHHhhcCHH
Confidence 999999988899999999999999999999998865422211 111111 12234556778899999999999999
Q ss_pred CCCCH-----HHHHHH
Q 014484 231 ERPNA-----KSLVIS 241 (423)
Q Consensus 231 ~Rps~-----~~vl~~ 241 (423)
+|++. ++++.|
T Consensus 242 ~R~~~~~~~~~~~~~h 257 (324)
T cd05587 242 KRLGCGPTGERDIREH 257 (324)
T ss_pred HcCCCCCCCHHHHhcC
Confidence 99976 677665
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-38 Score=288.85 Aligned_cols=236 Identities=21% Similarity=0.249 Sum_probs=191.8
Q ss_pred CCCCccceeeeec-----ceeeeeecCCChh--hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWFH-----CHLKSSVLESSDL--GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~~-----~~~~~~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|++|.||++.+.. ..+++|.+..... ..+.+.+|+.++++++||||+++++++.. ...++||||+++++|.+
T Consensus 6 g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~~~L~~ 84 (257)
T cd05040 6 GSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPLGSLLD 84 (257)
T ss_pred cCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCCCcHHH
Confidence 8999999998853 2467777665544 46688899999999999999999999998 78899999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC-------ccccC
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-------SYSTN 147 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-------~~~~t 147 (423)
++.+.....+++..++.++.|++.||.|||+++ ++|+||+|+||+++.++.++|+|||+++...... ...++
T Consensus 85 ~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~ 163 (257)
T cd05040 85 RLRKDALGHFLISTLCDYAVQIANGMRYLESKR-FIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVP 163 (257)
T ss_pred HHHhcccccCcHHHHHHHHHHHHHHHHHHHhCC-ccccccCcccEEEecCCEEEeccccccccccccccceecccCCCCC
Confidence 996543356899999999999999999999999 9999999999999999999999999987664421 23456
Q ss_pred cccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcc
Q 014484 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (423)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (423)
..|+|||.+.+..++.++|||||||++++|++ |..|+......... ............+...+..+.+++.+||+
T Consensus 164 ~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 239 (257)
T cd05040 164 FAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQIL----KKIDKEGERLERPEACPQDIYNVMLQCWA 239 (257)
T ss_pred ceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHH----HHHHhcCCcCCCCccCCHHHHHHHHHHCC
Confidence 78999999998889999999999999999998 88877543211111 11111111122334457889999999999
Q ss_pred cCcCCCCCHHHHHHHHH
Q 014484 227 SEARERPNAKSLVISLM 243 (423)
Q Consensus 227 ~dp~~Rps~~~vl~~l~ 243 (423)
.+|++|||+.++++.|.
T Consensus 240 ~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 240 HNPADRPTFAALREFLP 256 (257)
T ss_pred CCcccCCCHHHHHHHhc
Confidence 99999999999998764
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-38 Score=290.32 Aligned_cols=238 Identities=19% Similarity=0.263 Sum_probs=191.2
Q ss_pred CCCCccceeeeec-----ceeeeeecCCCh---hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCc------eeEEEecC
Q 014484 2 GGRCSKFSICWFH-----CHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADE------RLLVAEFM 67 (423)
Q Consensus 2 G~~g~v~~~~~~~-----~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~------~~lv~e~~ 67 (423)
|+||.||.+.+.. ..+++|.+.... .....+.+|++.++.++||||+++++++..... .++||||+
T Consensus 10 G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~ 89 (273)
T cd05035 10 GEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPKPMVILPFM 89 (273)
T ss_pred CCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcccEEEEecc
Confidence 8999999998742 457777765432 335678899999999999999999999876554 68999999
Q ss_pred CCCCHHhhhccC----CCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCCc
Q 014484 68 PNETLAKHLFHW----ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS 143 (423)
Q Consensus 68 ~~~~L~~~i~~~----~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 143 (423)
++++|..++... ....+++..+..++.|++.||.|||+++ ++||||||+||++++++.++|+|||+++.......
T Consensus 90 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 168 (273)
T cd05035 90 KHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN-FIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDY 168 (273)
T ss_pred CCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC-eeccccchheEEECCCCeEEECCccceeecccccc
Confidence 999999988432 2246899999999999999999999999 99999999999999999999999999886543321
Q ss_pred ------cccCcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHH
Q 014484 144 ------YSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTE 216 (423)
Q Consensus 144 ------~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (423)
..++..|+|||.+.+..++.++|||||||++|||++ |..|+...... ..............+..++.+
T Consensus 169 ~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 243 (273)
T cd05035 169 YRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH-----EIYDYLRHGNRLKQPEDCLDE 243 (273)
T ss_pred ccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHcCCCCCCCcCCCHH
Confidence 234568999999988889999999999999999999 77666543211 111222222223345567789
Q ss_pred HHHHHHHhcccCcCCCCCHHHHHHHHHhh
Q 014484 217 LVRLASRCLQSEARERPNAKSLVISLMSL 245 (423)
Q Consensus 217 l~~li~~cl~~dp~~Rps~~~vl~~l~~~ 245 (423)
+.+++.+||+.||++|||+.+++++|..+
T Consensus 244 ~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 244 LYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 99999999999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-39 Score=285.39 Aligned_cols=238 Identities=17% Similarity=0.183 Sum_probs=188.3
Q ss_pred CCCCccceeeee--cceeeeeecCCChh---hHHHHHHHHHHHhcCCCCC-ccceEeEEEeCC------ceeEEEecCCC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDL---GETLNLEEAKAVGNLRSER-LANLIGCCYEAD------ERLLVAEFMPN 69 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~---~~~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~------~~~lv~e~~~~ 69 (423)
|.||.||++... +..|+.|.+.-... -.....+|+.+++.|+|+| ||++++++...+ .+++|+||++.
T Consensus 22 Gtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~lvfe~~d~ 101 (323)
T KOG0594|consen 22 GTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYLVFEFLDR 101 (323)
T ss_pred CCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceEEEEEEeecc
Confidence 889999999985 55566655533322 2445689999999999999 999999999887 78999999976
Q ss_pred CCHHhhhccCCC--CCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----Cc
Q 014484 70 ETLAKHLFHWET--QPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KS 143 (423)
Q Consensus 70 ~~L~~~i~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~ 143 (423)
+|..++..... +.++...+..++.||+.||.|||+++ |+||||||.|||++++|.+||+|||+++...-. ..
T Consensus 102 -DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~-IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~~yt~ 179 (323)
T KOG0594|consen 102 -DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHG-ILHRDLKPQNLLISSSGVLKLADFGLARAFSIPMRTYTP 179 (323)
T ss_pred -cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCC-eecccCCcceEEECCCCcEeeeccchHHHhcCCcccccc
Confidence 99999965432 46888999999999999999999999 999999999999999999999999999865522 34
Q ss_pred cccCcccCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccc--------------c--cc
Q 014484 144 YSTNLAFTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS--------------A--LE 206 (423)
Q Consensus 144 ~~~t~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~--------------~--~~ 206 (423)
..+|..|.|||++.+. .|+...||||+||++.||+++.+.|++..........+..+-.+ . ..
T Consensus 180 evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~ 259 (323)
T KOG0594|consen 180 EVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFP 259 (323)
T ss_pred cEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCc
Confidence 5679999999999887 59999999999999999999999988764322111111111100 0 00
Q ss_pred CCC-ChhH-------HHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014484 207 GHF-SNDE-------GTELVRLASRCLQSEARERPNAKSLVIS 241 (423)
Q Consensus 207 ~~~-~~~~-------~~~l~~li~~cl~~dp~~Rps~~~vl~~ 241 (423)
... +..+ .++..+++.+||+.+|.+|.|++.++.|
T Consensus 260 ~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 260 KWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred CCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 000 1111 2478999999999999999999999988
|
|
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-38 Score=295.78 Aligned_cols=241 Identities=17% Similarity=0.287 Sum_probs=193.5
Q ss_pred CCCCccceeeee---------cceeeeeecCCC--hhhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCC
Q 014484 2 GGRCSKFSICWF---------HCHLKSSVLESS--DLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPN 69 (423)
Q Consensus 2 G~~g~v~~~~~~---------~~~~~~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 69 (423)
|+||.||.+.+. +..+++|.+... ......+.+|+.++..+ +||||+++++++......++||||+++
T Consensus 26 G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 105 (304)
T cd05101 26 GCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 105 (304)
T ss_pred cCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCCceEEEEecCCC
Confidence 899999999753 234666766543 23456788999999999 899999999999999999999999999
Q ss_pred CCHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEcccccc
Q 014484 70 ETLAKHLFHWE--------------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLM 135 (423)
Q Consensus 70 ~~L~~~i~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~ 135 (423)
++|.+++.... ...+++..+..++.||+.||.|||++| ++||||||+||+++.++.++|+|||++
T Consensus 106 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g-ivH~dlkp~Nili~~~~~~kl~D~g~~ 184 (304)
T cd05101 106 GNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK-CIHRDLAARNVLVTENNVMKIADFGLA 184 (304)
T ss_pred CcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC-eeecccccceEEEcCCCcEEECCCccc
Confidence 99999986421 235788899999999999999999999 999999999999999999999999998
Q ss_pred ccCCCCC------ccccCcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCC
Q 014484 136 KNSRDGK------SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGH 208 (423)
Q Consensus 136 ~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (423)
+...... ...+++.|+|||++.+..++.++||||||+++|+|++ |..|+...... .....+.......
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-----~~~~~~~~~~~~~ 259 (304)
T cd05101 185 RDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE-----ELFKLLKEGHRMD 259 (304)
T ss_pred eecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH-----HHHHHHHcCCcCC
Confidence 8664321 1234567999999988889999999999999999998 66666543221 1111222222223
Q ss_pred CChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhhh
Q 014484 209 FSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 209 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~~~~ 248 (423)
.+..++.++.+++.+||+.+|.+|||+.++++.|.++..-
T Consensus 260 ~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 260 KPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred CCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence 3445678899999999999999999999999999887643
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-39 Score=302.59 Aligned_cols=236 Identities=14% Similarity=0.211 Sum_probs=189.6
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||.+... +..+++|++.... .....+.+|+.++.++ +||||+.+++++...+..|+||||++|++|..
T Consensus 6 G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 85 (327)
T cd05617 6 GSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNGGDLMF 85 (327)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCCCcHHH
Confidence 899999999874 5667788776532 2345678899999888 69999999999999999999999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCC----CCccccCccc
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNLAF 150 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~~t~~y 150 (423)
++.. .+.+++..+..++.||+.||.|||+++ |+||||||+|||++.++.++|+|||+++.... .....||+.|
T Consensus 86 ~~~~--~~~l~~~~~~~~~~qi~~al~~lH~~~-ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y 162 (327)
T cd05617 86 HMQR--QRKLPEEHARFYAAEICIALNFLHERG-IIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCGTPNY 162 (327)
T ss_pred HHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceecccCCccc
Confidence 8853 457999999999999999999999999 99999999999999999999999999875322 2335689999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHH-hhh-chhhhhccccccCCCChhHHHHHHHHHHHhcccC
Q 014484 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDL-IRS-KNFLLLMDSALEGHFSNDEGTELVRLASRCLQSE 228 (423)
Q Consensus 151 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 228 (423)
+|||++.+..++.++|||||||++|+|++|..||....... ... ........ .....++...+..+.+++.+||..|
T Consensus 163 ~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~li~~~L~~d 241 (327)
T cd05617 163 IAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVIL-EKPIRIPRFLSVKASHVLKGFLNKD 241 (327)
T ss_pred CCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHH-hCCCCCCCCCCHHHHHHHHHHhccC
Confidence 99999998899999999999999999999999885321100 000 01111111 1122345566788999999999999
Q ss_pred cCCCCCH------HHHHHH
Q 014484 229 ARERPNA------KSLVIS 241 (423)
Q Consensus 229 p~~Rps~------~~vl~~ 241 (423)
|.+|+++ ++++.|
T Consensus 242 P~~R~~~~~~~~~~~i~~h 260 (327)
T cd05617 242 PKERLGCQPQTGFSDIKSH 260 (327)
T ss_pred HHHcCCCCCCCCHHHHHcC
Confidence 9999984 577666
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-38 Score=300.03 Aligned_cols=231 Identities=19% Similarity=0.214 Sum_probs=185.6
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHH-HHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAK-AVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||++.+. +..+++|++.... .....+..|+. +++.++||||+++++++.+.+..++||||++|++|..
T Consensus 6 G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~ 85 (321)
T cd05603 6 GSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGGELFF 85 (321)
T ss_pred CCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCCCCHHH
Confidence 899999999884 5667888765432 22334555554 5788899999999999999999999999999999998
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCC----CCccccCccc
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNLAF 150 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~~t~~y 150 (423)
.+.+ ...+++..+..++.||+.||.|||+++ |+||||||+||+++.+|.+||+|||+++.... .....||+.|
T Consensus 86 ~l~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y 162 (321)
T cd05603 86 HLQR--ERCFLEPRARFYAAEVASAIGYLHSLN-IIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCGTPEY 162 (321)
T ss_pred HHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccccccCCccc
Confidence 8853 456899999999999999999999999 99999999999999999999999999875322 1234689999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcC
Q 014484 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (423)
Q Consensus 151 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (423)
+|||.+.+..++.++|||||||++|+|++|..||......... ...... ...++...+.++.+++.+||+.||.
T Consensus 163 ~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~----~~i~~~--~~~~~~~~~~~~~~li~~~l~~~p~ 236 (321)
T cd05603 163 LAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMY----DNILHK--PLQLPGGKTVAACDLLVGLLHKDQR 236 (321)
T ss_pred CCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHH----HHHhcC--CCCCCCCCCHHHHHHHHHHccCCHh
Confidence 9999999888999999999999999999999988664222111 111111 1234455677899999999999999
Q ss_pred CCCCHH----HHHHH
Q 014484 231 ERPNAK----SLVIS 241 (423)
Q Consensus 231 ~Rps~~----~vl~~ 241 (423)
+||+.. ++++|
T Consensus 237 ~R~~~~~~~~~~~~~ 251 (321)
T cd05603 237 RRLGAKADFLEIKNH 251 (321)
T ss_pred hcCCCCCCHHHHhCC
Confidence 998764 55544
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-38 Score=289.72 Aligned_cols=237 Identities=21% Similarity=0.255 Sum_probs=191.5
Q ss_pred CCCCccceeeeec-----ceeeeeecCCC--hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWFH-----CHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~~-----~~~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||++.+.. ..+++|.+... ......|..|+.+++.++||||+++++++..+...++||||+++++|.+
T Consensus 15 g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~ 94 (269)
T cd05065 15 GEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIITEFMENGALDS 94 (269)
T ss_pred CCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEEecCCCCcHHH
Confidence 8999999998752 24777776543 3346689999999999999999999999999999999999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCCc-------cc--
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS-------YS-- 145 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-------~~-- 145 (423)
++.. ..+.+++.++..++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||++........ ..
T Consensus 95 ~l~~-~~~~~~~~~~~~i~~~l~~al~~lH~~g-~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~ 172 (269)
T cd05065 95 FLRQ-NDGQFTVIQLVGMLRGIAAGMKYLSEMN-YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGK 172 (269)
T ss_pred HHhh-CCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccChheEEEcCCCcEEECCCccccccccCccccccccccCCC
Confidence 9864 3456899999999999999999999999 99999999999999999999999999875433211 11
Q ss_pred cCcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHh
Q 014484 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRC 224 (423)
Q Consensus 146 ~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 224 (423)
.+..|+|||.+.+..++.++|||||||++|||++ |..||...... .....+........+..++..+.+++.+|
T Consensus 173 ~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~-----~~~~~i~~~~~~~~~~~~~~~~~~li~~~ 247 (269)
T cd05065 173 IPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ-----DVINAIEQDYRLPPPMDCPTALHQLMLDC 247 (269)
T ss_pred cceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH-----HHHHHHHcCCcCCCcccCCHHHHHHHHHH
Confidence 1347999999998889999999999999999886 88777543211 11111111122233445678899999999
Q ss_pred cccCcCCCCCHHHHHHHHHhh
Q 014484 225 LQSEARERPNAKSLVISLMSL 245 (423)
Q Consensus 225 l~~dp~~Rps~~~vl~~l~~~ 245 (423)
|..+|++||++++++..|+.+
T Consensus 248 l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 248 WQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred cCCChhhCcCHHHHHHHHHhh
Confidence 999999999999999988754
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-38 Score=289.44 Aligned_cols=237 Identities=23% Similarity=0.351 Sum_probs=196.4
Q ss_pred CCCCccceeeee-cceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccCC
Q 014484 2 GGRCSKFSICWF-HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80 (423)
Q Consensus 2 G~~g~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~ 80 (423)
|+||.||++.+. +..+++|.+.........+.+|+.+++.++|+||+++++++......++||||+++++|.+++....
T Consensus 17 g~~~~v~~~~~~~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~ 96 (261)
T cd05034 17 GQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGE 96 (261)
T ss_pred CcceEEEEEEEcCCceEEEEEecCCccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccCCCCHHHHHhccc
Confidence 889999998864 4557777777666667789999999999999999999999999889999999999999999997655
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC-----ccccCcccCCccc
Q 014484 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-----SYSTNLAFTPPEY 155 (423)
Q Consensus 81 ~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-----~~~~t~~y~aPE~ 155 (423)
+..+++..+..++.|++.|+.|||+++ ++|+||||+||++++++.++|+|||++....... ...++..|+|||.
T Consensus 97 ~~~~~~~~~~~~~~~i~~al~~lh~~~-i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~ 175 (261)
T cd05034 97 GKKLRLPQLVDMAAQIAEGMAYLESRN-YIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEA 175 (261)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCcchheEEEcCCCCEEECccccceeccchhhhhhhccCCCccccCHHH
Confidence 567999999999999999999999999 9999999999999999999999999987654321 1224568999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCC
Q 014484 156 MRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (423)
Q Consensus 156 ~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (423)
+.+..++.++|+||+|+++++|++ |..||...... ..............+...+.++.+++.+||+.+|++||+
T Consensus 176 ~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~ 250 (261)
T cd05034 176 ANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR-----EVLEQVERGYRMPRPPNCPEELYDLMLQCWDKDPEERPT 250 (261)
T ss_pred hccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCC
Confidence 998889999999999999999998 88777553211 111111112222334455788999999999999999999
Q ss_pred HHHHHHHHHh
Q 014484 235 AKSLVISLMS 244 (423)
Q Consensus 235 ~~~vl~~l~~ 244 (423)
+++++..|+.
T Consensus 251 ~~~l~~~l~~ 260 (261)
T cd05034 251 FEYLQSFLED 260 (261)
T ss_pred HHHHHHHHhc
Confidence 9999988764
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-38 Score=289.49 Aligned_cols=241 Identities=13% Similarity=0.180 Sum_probs=195.1
Q ss_pred CCCCccceeeee--cceeeeeecCC----ChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLES----SDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.+. +..+++|.+.. .......+.+|+++++.++||||+++++++...+..++||||+++++|.++
T Consensus 13 g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~ 92 (267)
T cd08228 13 GQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLELADAGDLSQM 92 (267)
T ss_pred CCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEEEecCCCcHHHH
Confidence 899999999874 56677775532 223355788999999999999999999999999999999999999999988
Q ss_pred hccC--CCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC----ccccCcc
Q 014484 76 LFHW--ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK----SYSTNLA 149 (423)
Q Consensus 76 i~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~----~~~~t~~ 149 (423)
+... ....+++..+..++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||++....... ...+++.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~ 171 (267)
T cd08228 93 IKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR-VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPY 171 (267)
T ss_pred HHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCC-eeCCCCCHHHEEEcCCCCEEECccccceeccchhHHHhcCCCCcc
Confidence 8532 2345899999999999999999999999 9999999999999999999999999987654332 3467889
Q ss_pred cCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccc-cccCCCChhHHHHHHHHHHHhcccC
Q 014484 150 FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS-ALEGHFSNDEGTELVRLASRCLQSE 228 (423)
Q Consensus 150 y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~d 228 (423)
|+|||.+.+..++.++|+||||+++|+|++|..|+........ .....+.. ......+...+..+.+++.+||..+
T Consensus 172 ~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~ 248 (267)
T cd08228 172 YMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLF---SLCQKIEQCDYPPLPTEHYSEKLRELVSMCIYPD 248 (267)
T ss_pred ccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHH---HHHHHHhcCCCCCCChhhcCHHHHHHHHHHCCCC
Confidence 9999999888899999999999999999999988765322111 11111111 1112223345678999999999999
Q ss_pred cCCCCCHHHHHHHHHhhh
Q 014484 229 ARERPNAKSLVISLMSLQ 246 (423)
Q Consensus 229 p~~Rps~~~vl~~l~~~~ 246 (423)
|++|||+.++++.+.++.
T Consensus 249 p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 249 PDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred cccCcCHHHHHHHHHHhc
Confidence 999999999999998764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-38 Score=305.30 Aligned_cols=233 Identities=17% Similarity=0.158 Sum_probs=183.2
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW 79 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~ 79 (423)
|+||.||.+... +..+++|... ...+.+|+++++.++||||+++++++..+...++|||++. ++|..++..
T Consensus 103 G~~g~V~~~~d~~~~~~vaiK~~~-----~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~- 175 (391)
T PHA03212 103 GAEGFAFACIDNKTCEHVVIKAGQ-----RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYK-TDLYCYLAA- 175 (391)
T ss_pred CCCeEEEEEEECCCCCEEEEechh-----hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecCC-CCHHHHHHh-
Confidence 899999999874 5666666432 3457899999999999999999999999999999999995 589888853
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCC-----CCccccCcccCCcc
Q 014484 80 ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD-----GKSYSTNLAFTPPE 154 (423)
Q Consensus 80 ~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~-----~~~~~~t~~y~aPE 154 (423)
...+++..++.++.||+.||.|||+++ |+||||||+|||++.++.++|+|||+++.... .....||+.|+|||
T Consensus 176 -~~~l~~~~~~~i~~qi~~aL~ylH~~~-IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE 253 (391)
T PHA03212 176 -KRNIAICDILAIERSVLRAIQYLHENR-IIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYYGWAGTIATNAPE 253 (391)
T ss_pred -cCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChHhEEEcCCCCEEEEeCCcccccccccccccccccCccCCCChh
Confidence 456899999999999999999999999 99999999999999999999999999864322 12356899999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhh--------HHhh-----------------hchhh----hhccccc
Q 014484 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHAL--------DLIR-----------------SKNFL----LLMDSAL 205 (423)
Q Consensus 155 ~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~--------~~~~-----------------~~~~~----~~~~~~~ 205 (423)
++.+..++.++|||||||++|||++|..|+..... .... ..... .......
T Consensus 254 ~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (391)
T PHA03212 254 LLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSS 333 (391)
T ss_pred hhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccC
Confidence 99988999999999999999999999977643210 0000 00000 0000000
Q ss_pred -----cCCC--ChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 206 -----EGHF--SNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 206 -----~~~~--~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
...+ ....+.++.++|.+||+.||.+|||++++++|-.
T Consensus 334 ~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~ 378 (391)
T PHA03212 334 RKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAA 378 (391)
T ss_pred CCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChh
Confidence 0000 0134678999999999999999999999998754
|
|
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-39 Score=306.19 Aligned_cols=236 Identities=16% Similarity=0.241 Sum_probs=198.1
Q ss_pred CCCCccceeeeec--ceeeeeecCCCh-hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICWFH--CHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~~~--~~~~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
|.||.||.+.+.. .++++|-++... ...+.+..||.+.+.|+|.|||+++|.+..++.+-|.||-++||+|...++.
T Consensus 586 GTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSsLLrs 665 (1226)
T KOG4279|consen 586 GTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSSLLRS 665 (1226)
T ss_pred CceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHHHHHh
Confidence 8899999999864 455555554333 3466788999999999999999999999999988999999999999999963
Q ss_pred CCCCCC--CHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeec-CCCCeEEccccccccCC----CCCccccCcccC
Q 014484 79 WETQPM--KWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFD-KDGNPRLSSFGLMKNSR----DGKSYSTNLAFT 151 (423)
Q Consensus 79 ~~~~~~--~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~-~~~~~kl~Dfg~~~~~~----~~~~~~~t~~y~ 151 (423)
.=+++ .+.++-.+.+||+.||.|||++. |||||||.+|+|++ -.|.+||+|||-+++.. ...++.||..||
T Consensus 666 -kWGPlKDNEstm~fYtkQILeGLkYLHen~-IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFTGTLQYM 743 (1226)
T KOG4279|consen 666 -KWGPLKDNESTMNFYTKQILEGLKYLHENK-IVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYM 743 (1226)
T ss_pred -ccCCCccchhHHHHHHHHHHHHhhhhhhcc-eeeccccCCcEEEeeccceEEecccccchhhccCCccccccccchhhh
Confidence 34456 77888899999999999999999 99999999999995 57899999999887654 346788999999
Q ss_pred CccccccCC--CCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCc
Q 014484 152 PPEYMRTGR--VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEA 229 (423)
Q Consensus 152 aPE~~~~~~--~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 229 (423)
|||++..++ |+.++|||||||++.||.||++||..-+... ....+.--....++.|.+++.+...||.+|+..||
T Consensus 744 APEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgspq---AAMFkVGmyKvHP~iPeelsaeak~FilrcFepd~ 820 (1226)
T KOG4279|consen 744 APEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQ---AAMFKVGMYKVHPPIPEELSAEAKNFILRCFEPDP 820 (1226)
T ss_pred ChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChh---HhhhhhcceecCCCCcHHHHHHHHHHHHHHcCCCc
Confidence 999998664 9999999999999999999999987543221 22333333456678899999999999999999999
Q ss_pred CCCCCHHHHHHHH
Q 014484 230 RERPNAKSLVISL 242 (423)
Q Consensus 230 ~~Rps~~~vl~~l 242 (423)
..|||+.+++...
T Consensus 821 ~~R~sA~~LL~Dp 833 (1226)
T KOG4279|consen 821 CDRPSAKDLLQDP 833 (1226)
T ss_pred ccCccHHHhccCc
Confidence 9999999999663
|
|
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-39 Score=316.54 Aligned_cols=235 Identities=15% Similarity=0.189 Sum_probs=193.0
Q ss_pred CCCCccceeeee--cceeeeeecCCC---hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCC--------ceeEEEecCC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEAD--------ERLLVAEFMP 68 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--------~~~lv~e~~~ 68 (423)
|+||.||.+.+. +..+++|++... ......+.+|+..+..++|+||+++++.+...+ .+++||||++
T Consensus 43 G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~~~i~lV~Ey~~ 122 (496)
T PTZ00283 43 GATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENVLMIALVLDYAN 122 (496)
T ss_pred CCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccceEEEEEEeCCC
Confidence 899999999874 678888887543 334567889999999999999999988876543 2579999999
Q ss_pred CCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCC------
Q 014484 69 NETLAKHLFHW--ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD------ 140 (423)
Q Consensus 69 ~~~L~~~i~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~------ 140 (423)
+|+|.+++... ....+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 123 ~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~-IiHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~~~~~ 201 (496)
T PTZ00283 123 AGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKH-MIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDV 201 (496)
T ss_pred CCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEeCCCCEEEEecccCeeccccccccc
Confidence 99999988632 2457999999999999999999999999 99999999999999999999999999876442
Q ss_pred CCccccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHH
Q 014484 141 GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRL 220 (423)
Q Consensus 141 ~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 220 (423)
.....||+.|+|||++.+..++.++|||||||++|||++|..||........ ..... .......+..+++++.++
T Consensus 202 ~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~----~~~~~-~~~~~~~~~~~~~~l~~l 276 (496)
T PTZ00283 202 GRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEV----MHKTL-AGRYDPLPPSISPEMQEI 276 (496)
T ss_pred cccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHH----HHHHh-cCCCCCCCCCCCHHHHHH
Confidence 2345689999999999988899999999999999999999998875422211 11111 112223456678899999
Q ss_pred HHHhcccCcCCCCCHHHHHHHH
Q 014484 221 ASRCLQSEARERPNAKSLVISL 242 (423)
Q Consensus 221 i~~cl~~dp~~Rps~~~vl~~l 242 (423)
+.+||+.||.+|||+.+++.+.
T Consensus 277 i~~~L~~dP~~RPs~~ell~~p 298 (496)
T PTZ00283 277 VTALLSSDPKRRPSSSKLLNMP 298 (496)
T ss_pred HHHHcccChhhCcCHHHHHhCH
Confidence 9999999999999999999874
|
|
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-38 Score=297.55 Aligned_cols=242 Identities=19% Similarity=0.293 Sum_probs=194.5
Q ss_pred CCCCccceeeeec---------ceeeeeecCCC--hhhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCC
Q 014484 2 GGRCSKFSICWFH---------CHLKSSVLESS--DLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPN 69 (423)
Q Consensus 2 G~~g~v~~~~~~~---------~~~~~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 69 (423)
|+||.||.+.+.+ ..+++|.+... ......+.+|++++.++ +||||++++++|..++..+++|||+++
T Consensus 23 G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 102 (334)
T cd05100 23 GCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVLVEYASK 102 (334)
T ss_pred ccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCceEEEEecCCC
Confidence 8999999998642 24566666542 33456788999999999 899999999999999999999999999
Q ss_pred CCHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEcccccc
Q 014484 70 ETLAKHLFHWE--------------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLM 135 (423)
Q Consensus 70 ~~L~~~i~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~ 135 (423)
++|.+++.... ...+++.++..++.|++.||.|||+++ ++||||||+||+++.++.++|+|||++
T Consensus 103 g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g-ivH~dlkp~Nill~~~~~~kL~Dfg~~ 181 (334)
T cd05100 103 GNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK-CIHRDLAARNVLVTEDNVMKIADFGLA 181 (334)
T ss_pred CcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC-eeccccccceEEEcCCCcEEECCcccc
Confidence 99999986421 234788899999999999999999999 999999999999999999999999998
Q ss_pred ccCCCCC------ccccCcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCC
Q 014484 136 KNSRDGK------SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGH 208 (423)
Q Consensus 136 ~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (423)
+...... ...++..|+|||.+.+..++.++|||||||++|||++ |..||...... .....+.......
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-----~~~~~~~~~~~~~ 256 (334)
T cd05100 182 RDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE-----ELFKLLKEGHRMD 256 (334)
T ss_pred eecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHH-----HHHHHHHcCCCCC
Confidence 7654322 1223467999999998889999999999999999998 77776543211 1222222222233
Q ss_pred CChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhhhc
Q 014484 209 FSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEA 249 (423)
Q Consensus 209 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~~~~~ 249 (423)
.+..++.++.+++.+||+.+|.+|||+.+++..|..+....
T Consensus 257 ~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~ 297 (334)
T cd05100 257 KPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVT 297 (334)
T ss_pred CCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhc
Confidence 44456778999999999999999999999999999887543
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-38 Score=291.79 Aligned_cols=236 Identities=18% Similarity=0.243 Sum_probs=191.6
Q ss_pred CCCCccceeeeec-------ceeeeeecCCCh--hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICWFH-------CHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~~~-------~~~~~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 72 (423)
|+||.||.+.+.+ ..+++|.+.... .....+.+|+.++..++||||+++++++..+...++||||+++++|
T Consensus 17 g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L 96 (277)
T cd05032 17 GSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTLVVMELMAKGDL 96 (277)
T ss_pred CCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcEEEEecCCCCCH
Confidence 8999999988753 447777765432 3355788999999999999999999999999999999999999999
Q ss_pred HhhhccCC--------CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC---
Q 014484 73 AKHLFHWE--------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--- 141 (423)
Q Consensus 73 ~~~i~~~~--------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--- 141 (423)
.+++.... ...+++..+..++.|++.||.|||+++ ++||||||+||+++.++.++|+|||+++.....
T Consensus 97 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~di~p~nill~~~~~~kl~dfg~~~~~~~~~~~ 175 (277)
T cd05032 97 KSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK-FVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYY 175 (277)
T ss_pred HHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccccChheEEEcCCCCEEECCcccchhhccCccc
Confidence 99985321 224788899999999999999999999 999999999999999999999999998754432
Q ss_pred ---CccccCcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHH
Q 014484 142 ---KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTEL 217 (423)
Q Consensus 142 ---~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 217 (423)
....++..|+|||.+.+..++.++|||||||++||+++ |..|+....... .............+..++.++
T Consensus 176 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 250 (277)
T cd05032 176 RKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEE-----VLKFVIDGGHLDLPENCPDKL 250 (277)
T ss_pred ccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHH-----HHHHHhcCCCCCCCCCCCHHH
Confidence 22345778999999988889999999999999999998 777775432211 111111222233455567889
Q ss_pred HHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 218 VRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 218 ~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
.+++.+||+.+|++|||+.+++..|+
T Consensus 251 ~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 251 LELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred HHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 99999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-38 Score=305.48 Aligned_cols=240 Identities=19% Similarity=0.284 Sum_probs=193.1
Q ss_pred CCCCccceeeeec-------ceeeeeecCCCh--hhHHHHHHHHHHHhcCC-CCCccceEeEEEeCCceeEEEecCCCCC
Q 014484 2 GGRCSKFSICWFH-------CHLKSSVLESSD--LGETLNLEEAKAVGNLR-SERLANLIGCCYEADERLLVAEFMPNET 71 (423)
Q Consensus 2 G~~g~v~~~~~~~-------~~~~~~~~~~~~--~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~~~ 71 (423)
|+||.||++.+.+ ..+++|++.... .....+.+|++++..+. ||||++++++|...+..++||||+++|+
T Consensus 48 G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~iv~E~~~~g~ 127 (401)
T cd05107 48 GAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIYIITEYCRYGD 127 (401)
T ss_pred CCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCcEEEEeccCCCc
Confidence 8999999998753 457888876542 22457889999999997 9999999999999999999999999999
Q ss_pred HHhhhccCC-----------------------------------------------------------------------
Q 014484 72 LAKHLFHWE----------------------------------------------------------------------- 80 (423)
Q Consensus 72 L~~~i~~~~----------------------------------------------------------------------- 80 (423)
|.+++.+..
T Consensus 128 L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (401)
T cd05107 128 LVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKGTVKYADIESS 207 (401)
T ss_pred HHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcchhhhhhhhhhcc
Confidence 999985421
Q ss_pred -------------------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEcccccc
Q 014484 81 -------------------------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLM 135 (423)
Q Consensus 81 -------------------------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~ 135 (423)
...+++..++.++.|++.||.|||+++ ++||||||+|||++.++.++|+|||++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrdlkp~NiLl~~~~~~kL~DfGla 286 (401)
T cd05107 208 NYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKN-CVHRDLAARNVLICEGKLVKICDFGLA 286 (401)
T ss_pred CcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC-cCcccCCcceEEEeCCCEEEEEecCcc
Confidence 123677888999999999999999999 999999999999999999999999998
Q ss_pred ccCCCC------CccccCcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCC
Q 014484 136 KNSRDG------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGH 208 (423)
Q Consensus 136 ~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (423)
+..... ....++..|+|||.+.+..++.++|||||||++|||++ |..|+....... .....+.......
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~----~~~~~~~~~~~~~ 362 (401)
T cd05107 287 RDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNE----QFYNAIKRGYRMA 362 (401)
T ss_pred eecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchH----HHHHHHHcCCCCC
Confidence 754321 12345678999999988889999999999999999998 777765432111 1112122222233
Q ss_pred CChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhh
Q 014484 209 FSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQ 246 (423)
Q Consensus 209 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~~ 246 (423)
.+..++.++.+++.+||..+|..||++++|+..|+.+.
T Consensus 363 ~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 363 KPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 44556789999999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-38 Score=288.55 Aligned_cols=234 Identities=15% Similarity=0.196 Sum_probs=193.5
Q ss_pred CCCCccceeeee--cceeeeeecCC--ChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLES--SDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~ 77 (423)
|+||.||.+.+. +..+++|.+.. .....+.+.+|+.+++.++|+||+++++++..++..++||||+++++|.+++.
T Consensus 11 g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~ 90 (255)
T cd08219 11 GSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCDGGDLMQKIK 90 (255)
T ss_pred cCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCCCCcHHHHHH
Confidence 889999999875 56666666532 33345678899999999999999999999999999999999999999999886
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccCCc
Q 014484 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPP 153 (423)
Q Consensus 78 ~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~aP 153 (423)
...+..+++..+..++.|++.||.+||+++ ++|+||||+||++++++.++++|||.+...... ....+++.|+||
T Consensus 91 ~~~~~~~~~~~~~~~~~~i~~al~~lH~~~-i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aP 169 (255)
T cd08219 91 LQRGKLFPEDTILQWFVQMCLGVQHIHEKR-VLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACTYVGTPYYVPP 169 (255)
T ss_pred hccCCCCCHHHHHHHHHHHHHHHHHHhhCC-cccCCCCcceEEECCCCcEEEcccCcceeecccccccccccCCccccCH
Confidence 545567899999999999999999999999 999999999999999999999999998765432 234678899999
Q ss_pred cccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCC
Q 014484 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERP 233 (423)
Q Consensus 154 E~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 233 (423)
|++.+..++.++|+||||+++|+|++|..||........ ............+..++..+.+++.+||+.||++||
T Consensus 170 E~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp 244 (255)
T cd08219 170 EIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNL-----ILKVCQGSYKPLPSHYSYELRSLIKQMFKRNPRSRP 244 (255)
T ss_pred HHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHH-----HHHHhcCCCCCCCcccCHHHHHHHHHHHhCCcccCC
Confidence 999888899999999999999999999998865422111 111111222234455677899999999999999999
Q ss_pred CHHHHHHH
Q 014484 234 NAKSLVIS 241 (423)
Q Consensus 234 s~~~vl~~ 241 (423)
|+.+++..
T Consensus 245 ~~~~il~~ 252 (255)
T cd08219 245 SATTILSR 252 (255)
T ss_pred CHHHHhhc
Confidence 99999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-38 Score=291.58 Aligned_cols=235 Identities=13% Similarity=0.179 Sum_probs=190.2
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHHhcC-CCCCccceEeEEEeC------CceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNL-RSERLANLIGCCYEA------DERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~------~~~~lv~e~~~~~~L 72 (423)
|+||.||++.+. +..+++|++.........+..|+.++..+ +|+||+++++++... ...++||||+.+++|
T Consensus 17 g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L 96 (272)
T cd06637 17 GTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSV 96 (272)
T ss_pred cCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEEEEcCCCCcH
Confidence 889999999874 56778888766665667888999999999 799999999999764 347899999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCc
Q 014484 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNL 148 (423)
Q Consensus 73 ~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~ 148 (423)
.+++.......+++..+..++.|++.||.|||+++ ++|+||||+||++++++.++|+|||+++..... ....|+.
T Consensus 97 ~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~-ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~g~~ 175 (272)
T cd06637 97 TDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK-VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTP 175 (272)
T ss_pred HHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCCHHHEEECCCCCEEEccCCCceecccccccCCcccccc
Confidence 99987544567999999999999999999999999 999999999999999999999999998765432 3356788
Q ss_pred ccCCccccc-----cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHH
Q 014484 149 AFTPPEYMR-----TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASR 223 (423)
Q Consensus 149 ~y~aPE~~~-----~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 223 (423)
.|+|||.+. +..++.++|+||+||++|+|++|..||...... ..................++.++.+++.+
T Consensus 176 ~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 251 (272)
T cd06637 176 YWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM----RALFLIPRNPAPRLKSKKWSKKFQSFIES 251 (272)
T ss_pred cccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHH----HHHHHHhcCCCCCCCCCCcCHHHHHHHHH
Confidence 999999886 335888999999999999999999887543111 11111111111222233456789999999
Q ss_pred hcccCcCCCCCHHHHHHH
Q 014484 224 CLQSEARERPNAKSLVIS 241 (423)
Q Consensus 224 cl~~dp~~Rps~~~vl~~ 241 (423)
||..||.+|||+.+++.|
T Consensus 252 ~l~~~p~~Rpt~~~il~~ 269 (272)
T cd06637 252 CLVKNHSQRPTTEQLMKH 269 (272)
T ss_pred HcCCChhhCCCHHHHhhC
Confidence 999999999999999876
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-38 Score=289.44 Aligned_cols=234 Identities=18% Similarity=0.235 Sum_probs=192.2
Q ss_pred CCCCccceeeee--cceeeeeecCCCh------hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHH
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD------LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLA 73 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 73 (423)
|++|.||.+... +..+++|.+.... .....+.+|++++++++||||+++++++..++..++||||++|++|.
T Consensus 13 g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 92 (263)
T cd06625 13 GAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIFMEYMPGGSVK 92 (263)
T ss_pred CCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEEEEECCCCcHH
Confidence 789999999863 5667777654322 12456888999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-------Ccccc
Q 014484 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-------KSYST 146 (423)
Q Consensus 74 ~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-------~~~~~ 146 (423)
+++.. .+.+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||+++..... ....+
T Consensus 93 ~~~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~ 169 (263)
T cd06625 93 DQLKA--YGALTETVTRKYTRQILEGVEYLHSNM-IVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTG 169 (263)
T ss_pred HHHHH--hCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEeecccceeccccccccccccCCCc
Confidence 99854 456899999999999999999999999 999999999999999999999999998754322 22456
Q ss_pred CcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcc
Q 014484 147 NLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (423)
Q Consensus 147 t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (423)
+..|+|||.+.+..++.++||||||+++|+|++|..||...... ...............+...+.++.+++.+||.
T Consensus 170 ~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 245 (263)
T cd06625 170 TPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAM----AAIFKIATQPTNPQLPSHVSPDARNFLRRTFV 245 (263)
T ss_pred CccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchH----HHHHHHhccCCCCCCCccCCHHHHHHHHHHhh
Confidence 78899999999888999999999999999999999887543111 11112222223334555677889999999999
Q ss_pred cCcCCCCCHHHHHHHH
Q 014484 227 SEARERPNAKSLVISL 242 (423)
Q Consensus 227 ~dp~~Rps~~~vl~~l 242 (423)
.+|.+|||+.+++.+.
T Consensus 246 ~~p~~Rpt~~~ll~~~ 261 (263)
T cd06625 246 ENAKKRPSAEELLRHF 261 (263)
T ss_pred cCcccCCCHHHHhhCC
Confidence 9999999999999874
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-38 Score=290.92 Aligned_cols=234 Identities=17% Similarity=0.263 Sum_probs=197.8
Q ss_pred CCCCccceee--eecceeeeeecCCChhh---HHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSIC--WFHCHLKSSVLESSDLG---ETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~--~~~~~~~~~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
|-|..|-.+. ..|..|++|++++.+.+ ...+++|++.|+.++|||||++|++......+|+|.|+=++|+|.+||
T Consensus 29 GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLELGD~GDl~DyI 108 (864)
T KOG4717|consen 29 GHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELGDGGDLFDYI 108 (864)
T ss_pred CceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEecCCchHHHHH
Confidence 3455444443 34899999999887654 457889999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeee-cCCCCeEEccccccccCCCCC---ccccCcccCC
Q 014484 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILF-DKDGNPRLSSFGLMKNSRDGK---SYSTNLAFTP 152 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill-~~~~~~kl~Dfg~~~~~~~~~---~~~~t~~y~a 152 (423)
.+.+. .+.++.+.+++.||+.|+.|||... +|||||||+|+.+ .+-|-+||+|||++-.+.++. +.+|+..|.|
T Consensus 109 mKHe~-Gl~E~La~kYF~QI~~AI~YCHqLH-VVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL~TsCGSLAYSA 186 (864)
T KOG4717|consen 109 MKHEE-GLNEDLAKKYFAQIVHAISYCHQLH-VVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKLTTSCGSLAYSA 186 (864)
T ss_pred Hhhhc-cccHHHHHHHHHHHHHHHHHHhhhh-hhcccCCcceeEEeeecCceEeeeccccccCCCcchhhcccchhhccC
Confidence 86544 4899999999999999999999999 9999999999876 667899999999998777664 5678999999
Q ss_pred ccccccCCCCC-CcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCC
Q 014484 153 PEYMRTGRVTP-ESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARE 231 (423)
Q Consensus 153 PE~~~~~~~~~-~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (423)
||++.|..|+. +.||||||+|||.|++|++||.... ..+.+..+++-.. ..|..++.+++++|..||..||.+
T Consensus 187 PEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeAN----DSETLTmImDCKY--tvPshvS~eCrdLI~sMLvRdPkk 260 (864)
T KOG4717|consen 187 PEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEAN----DSETLTMIMDCKY--TVPSHVSKECRDLIQSMLVRDPKK 260 (864)
T ss_pred chhhhcCccCCcchhhhHHHHHHHHHHhCCCcccccc----chhhhhhhhcccc--cCchhhhHHHHHHHHHHHhcCchh
Confidence 99999988864 8999999999999999999987642 2233444444332 357788999999999999999999
Q ss_pred CCCHHHHHHHHH
Q 014484 232 RPNAKSLVISLM 243 (423)
Q Consensus 232 Rps~~~vl~~l~ 243 (423)
|.|.++|..+-|
T Consensus 261 RAslEeI~s~~W 272 (864)
T KOG4717|consen 261 RASLEEIVSTSW 272 (864)
T ss_pred hccHHHHhcccc
Confidence 999999987643
|
|
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-38 Score=287.20 Aligned_cols=234 Identities=22% Similarity=0.318 Sum_probs=192.9
Q ss_pred CCCCccceeeeecceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccCCC
Q 014484 2 GGRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWET 81 (423)
Q Consensus 2 G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~ 81 (423)
|+||.||.+.+.+..+++|...... ....+.+|+.++..++||||+++++++..+. .++||||+++++|.+++.....
T Consensus 17 g~~g~v~~~~~~~~~~~iK~~~~~~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-~~~v~e~~~~~~L~~~l~~~~~ 94 (254)
T cd05083 17 GEFGAVLQGEYTGQKVAVKNIKCDV-TAQAFLEETAVMTKLHHKNLVRLLGVILHNG-LYIVMELMSKGNLVNFLRTRGR 94 (254)
T ss_pred CCCCceEecccCCCceEEEeecCcc-hHHHHHHHHHHHHhCCCCCcCeEEEEEcCCC-cEEEEECCCCCCHHHHHHhcCc
Confidence 8999999998888888888775543 3467889999999999999999999987654 7999999999999999975445
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-CccccCcccCCccccccCC
Q 014484 82 QPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSYSTNLAFTPPEYMRTGR 160 (423)
Q Consensus 82 ~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~~t~~y~aPE~~~~~~ 160 (423)
..+++..+..++.|++.||.|||+++ ++||||||+||+++.++.++|+|||++...... .....+..|+|||.+.+..
T Consensus 95 ~~~~~~~~~~~~~qi~~al~~lH~~~-~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~y~~pe~~~~~~ 173 (254)
T cd05083 95 ALVSVIQLLQFSLDVAEGMEYLESKK-LVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKLPVKWTAPEALKHKK 173 (254)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCC-eeccccCcceEEEcCCCcEEECCCccceeccccCCCCCCCceecCHHHhccCC
Confidence 56899999999999999999999999 999999999999999999999999998765433 2233456899999998888
Q ss_pred CCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHH
Q 014484 161 VTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239 (423)
Q Consensus 161 ~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl 239 (423)
++.++|+|||||++|+|++ |..||....... .............+..++..+.+++.+||+.+|..||++++++
T Consensus 174 ~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~ 248 (254)
T cd05083 174 FSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKE-----VKECVEKGYRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLR 248 (254)
T ss_pred cCchhhHHHHHHHHHHHHhCCCCCCccCCHHH-----HHHHHhCCCCCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence 9999999999999999998 887776542221 1112222222333455678899999999999999999999999
Q ss_pred HHHH
Q 014484 240 ISLM 243 (423)
Q Consensus 240 ~~l~ 243 (423)
..|+
T Consensus 249 ~~l~ 252 (254)
T cd05083 249 EKLE 252 (254)
T ss_pred HHHc
Confidence 8875
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-38 Score=293.08 Aligned_cols=237 Identities=19% Similarity=0.239 Sum_probs=193.1
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.+. +..+++|.+.... .....+.+|+++++.++|+||+.+.+.+..++..++||||+.+++|.++
T Consensus 11 G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 90 (285)
T cd05632 11 GGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIMNGGDLKFH 90 (285)
T ss_pred CCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEeccCccHHHH
Confidence 899999999885 5667778765433 2234578899999999999999999999999999999999999999988
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC---CccccCcccCC
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTP 152 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~~t~~y~a 152 (423)
+.......+++..+..++.|++.||.|||+++ |+||||||+||+++.++.++|+|||++...... ....|+..|+|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~-iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~g~~~~~a 169 (285)
T cd05632 91 IYNMGNPGFEEERALFYAAEILCGLEDLHREN-TVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRGRVGTVGYMA 169 (285)
T ss_pred HHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecCCCHHHEEECCCCCEEEecCCcceecCCCCcccCCCCCcCccC
Confidence 86544457999999999999999999999999 999999999999999999999999998765432 23467899999
Q ss_pred ccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCC
Q 014484 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (423)
Q Consensus 153 PE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (423)
||.+.+..++.++|+|||||++|+|++|..||......... ......+. .....++...+.++.+|+.+||+.||++|
T Consensus 170 PE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~P~~R 247 (285)
T cd05632 170 PEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKR-EEVDRRVL-ETEEVYSAKFSEEAKSICKMLLTKDPKQR 247 (285)
T ss_pred hHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHHhhh-ccccccCccCCHHHHHHHHHHccCCHhHc
Confidence 99998888999999999999999999999988654221111 11111111 11123445567789999999999999999
Q ss_pred CC-----HHHHHHH
Q 014484 233 PN-----AKSLVIS 241 (423)
Q Consensus 233 ps-----~~~vl~~ 241 (423)
|+ +.+++.|
T Consensus 248 ~~~~~~~~~~l~~~ 261 (285)
T cd05632 248 LGCQEEGAGEVKRH 261 (285)
T ss_pred CCCcccChHHHHcC
Confidence 99 7788876
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-38 Score=294.57 Aligned_cols=241 Identities=19% Similarity=0.310 Sum_probs=192.9
Q ss_pred CCCCccceeeee---------cceeeeeecCCC--hhhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCC
Q 014484 2 GGRCSKFSICWF---------HCHLKSSVLESS--DLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPN 69 (423)
Q Consensus 2 G~~g~v~~~~~~---------~~~~~~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 69 (423)
|+||.||.+... ...+++|.+... ......+.+|++++..+ +||||+++++++..++..++||||+++
T Consensus 23 G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 102 (314)
T cd05099 23 GCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEGPLYVIVEYAAK 102 (314)
T ss_pred CCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCCceEEEEecCCC
Confidence 899999998753 234666665543 23355788999999999 699999999999999999999999999
Q ss_pred CCHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEcccccc
Q 014484 70 ETLAKHLFHWE--------------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLM 135 (423)
Q Consensus 70 ~~L~~~i~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~ 135 (423)
|+|.+++.... ...+++..+..++.|++.||.|||++| ++||||||+||+++.++.++|+|||++
T Consensus 103 g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g-i~H~dlkp~Nill~~~~~~kL~Dfg~~ 181 (314)
T cd05099 103 GNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR-CIHRDLAARNVLVTEDNVMKIADFGLA 181 (314)
T ss_pred CcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC-eeeccccceeEEEcCCCcEEEcccccc
Confidence 99999996422 235889999999999999999999999 999999999999999999999999999
Q ss_pred ccCCCCC------ccccCcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCC
Q 014484 136 KNSRDGK------SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGH 208 (423)
Q Consensus 136 ~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (423)
+...... ...++..|+|||.+.+..++.++|||||||++|+|++ |..||...... .............
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~-----~~~~~~~~~~~~~ 256 (314)
T cd05099 182 RGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVE-----ELFKLLREGHRMD 256 (314)
T ss_pred ccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHcCCCCC
Confidence 8654321 1123457999999988889999999999999999999 77776543211 1111122222223
Q ss_pred CChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhhh
Q 014484 209 FSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 209 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~~~~ 248 (423)
.+..++.++.+++.+||..||++|||+.++++.|..+...
T Consensus 257 ~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~ 296 (314)
T cd05099 257 KPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAA 296 (314)
T ss_pred CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHH
Confidence 4455677899999999999999999999999999987654
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=299.88 Aligned_cols=231 Identities=17% Similarity=0.247 Sum_probs=188.6
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||++.+. +..+++|++.... .....+..|..++..+ .|++|+.+++++...+..++||||+++|+|.+
T Consensus 11 G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~ 90 (323)
T cd05616 11 GSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMY 90 (323)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEcCCCCCCHHH
Confidence 899999999875 4567888765432 2234567788888877 58999999999999999999999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCC----CCccccCccc
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNLAF 150 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~~t~~y 150 (423)
++.. .+.+++..+..++.|++.||.|||+++ |+||||||+|||++.++.++|+|||+++.... .....||+.|
T Consensus 91 ~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y 167 (323)
T cd05616 91 QIQQ--VGRFKEPHAVFYAAEIAIGLFFLHSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTKTFCGTPDY 167 (323)
T ss_pred HHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EEecCCCHHHeEECCCCcEEEccCCCceecCCCCCccccCCCChhh
Confidence 8854 456899999999999999999999999 99999999999999999999999999875432 2345689999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcC
Q 014484 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (423)
Q Consensus 151 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (423)
+|||++.+..++.++|||||||++|||++|..||........ ...... ....++...+.++.+++.+||+.||.
T Consensus 168 ~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~----~~~i~~--~~~~~p~~~s~~~~~li~~~l~~~p~ 241 (323)
T cd05616 168 IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL----FQSIME--HNVAYPKSMSKEAVAICKGLMTKHPG 241 (323)
T ss_pred cCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHH----HHHHHh--CCCCCCCcCCHHHHHHHHHHcccCHH
Confidence 999999998999999999999999999999999876422211 111111 11234556788999999999999999
Q ss_pred CCCCH-----HHHHHH
Q 014484 231 ERPNA-----KSLVIS 241 (423)
Q Consensus 231 ~Rps~-----~~vl~~ 241 (423)
+|++. .+++.|
T Consensus 242 ~R~~~~~~~~~~i~~h 257 (323)
T cd05616 242 KRLGCGPEGERDIKEH 257 (323)
T ss_pred hcCCCCCCCHHHHhcC
Confidence 99984 666655
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-38 Score=287.33 Aligned_cols=238 Identities=18% Similarity=0.226 Sum_probs=186.3
Q ss_pred CCCCccceeeeec-----ceeeeeecCCC--hhhHHHHHHHHHHHhcCCCCCccceEeEEEe-CCceeEEEecCCCCCHH
Q 014484 2 GGRCSKFSICWFH-----CHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYE-ADERLLVAEFMPNETLA 73 (423)
Q Consensus 2 G~~g~v~~~~~~~-----~~~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~~~~~~L~ 73 (423)
|+||.||++.+.. ..+++|.+... ......+.+|+.+++.++||||+++++++.. ++..++||||+.+++|.
T Consensus 6 g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~ 85 (262)
T cd05058 6 GHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKHGDLR 85 (262)
T ss_pred cCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCCCCCHH
Confidence 8999999998742 34666665432 2345688899999999999999999998764 55578999999999999
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC--------Cccc
Q 014484 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--------KSYS 145 (423)
Q Consensus 74 ~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--------~~~~ 145 (423)
+++... ....++..+..++.|++.||.|||+.+ ++||||||+||++++++.++|+|||+++..... ....
T Consensus 86 ~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~ 163 (262)
T cd05058 86 NFIRSE-THNPTVKDLIGFGLQVAKGMEYLASKK-FVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAK 163 (262)
T ss_pred HHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccccCcceEEEcCCCcEEECCccccccccCCcceeecccccCc
Confidence 998642 345678888999999999999999999 999999999999999999999999998754321 1223
Q ss_pred cCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCC-CCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHh
Q 014484 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHI-PPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRC 224 (423)
Q Consensus 146 ~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 224 (423)
++..|+|||.+.+..++.++|||||||++|||++|..| +...... .....+........+...+..+.+++.+|
T Consensus 164 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~li~~c 238 (262)
T cd05058 164 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSF-----DITVYLLQGRRLLQPEYCPDPLYEVMLSC 238 (262)
T ss_pred CCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHH-----HHHHHHhcCCCCCCCCcCCHHHHHHHHHH
Confidence 46789999999888899999999999999999996544 4332111 11111111111222334567899999999
Q ss_pred cccCcCCCCCHHHHHHHHHhhh
Q 014484 225 LQSEARERPNAKSLVISLMSLQ 246 (423)
Q Consensus 225 l~~dp~~Rps~~~vl~~l~~~~ 246 (423)
|..+|++||++.+++..|+.+.
T Consensus 239 l~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 239 WHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred cCCChhhCCCHHHHHHHHHHHh
Confidence 9999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-38 Score=302.20 Aligned_cols=238 Identities=19% Similarity=0.243 Sum_probs=184.4
Q ss_pred CCCCccceeeee--cceeeeeecCCC---hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCC-----ceeEEEecCCCCC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEAD-----ERLLVAEFMPNET 71 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-----~~~lv~e~~~~~~ 71 (423)
|+||.||.+... +..+++|.+... ......+.+|+++++.++||||+++++++.... ..|+||||+. ++
T Consensus 11 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~-~~ 89 (338)
T cd07859 11 GSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELME-SD 89 (338)
T ss_pred cCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEEEEecCC-CC
Confidence 899999999874 677888876532 223456889999999999999999999986543 4799999995 59
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-------Ccc
Q 014484 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-------KSY 144 (423)
Q Consensus 72 L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-------~~~ 144 (423)
|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ...
T Consensus 90 L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~ 166 (338)
T cd07859 90 LHQVIKA--NDDLTPEHHQFFLYQLLRALKYIHTAN-VFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDY 166 (338)
T ss_pred HHHHHHh--cccCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCcEEEccCccccccccccCccccccCC
Confidence 9998853 456999999999999999999999999 999999999999999999999999998754321 234
Q ss_pred ccCcccCCcccccc--CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhh-------------------hch---hhhh
Q 014484 145 STNLAFTPPEYMRT--GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIR-------------------SKN---FLLL 200 (423)
Q Consensus 145 ~~t~~y~aPE~~~~--~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~-------------------~~~---~~~~ 200 (423)
.+|..|+|||++.+ ..++.++|||||||++|+|++|.+||......... ... ....
T Consensus 167 ~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 246 (338)
T cd07859 167 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSS 246 (338)
T ss_pred CCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHh
Confidence 68899999999875 57899999999999999999999888653211000 000 0000
Q ss_pred ccccccCCC---ChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 201 MDSALEGHF---SNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 201 ~~~~~~~~~---~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
........+ .+..++++.+++.+||+.||++|||++++++|-.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~ 292 (338)
T cd07859 247 MRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPY 292 (338)
T ss_pred hcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCch
Confidence 000000000 0124567899999999999999999999998844
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-39 Score=272.00 Aligned_cols=241 Identities=17% Similarity=0.179 Sum_probs=192.0
Q ss_pred CCCCccceeeee--cceeeeeecCC-ChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCc-----eeEEEecCCCCCHH
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLES-SDLGETLNLEEAKAVGNLRSERLANLIGCCYEADE-----RLLVAEFMPNETLA 73 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-----~~lv~e~~~~~~L~ 73 (423)
|||.-||.+... +..++.|.+.. +..+.+..++|++..++++||||++++++...+.. .|++++|...|||.
T Consensus 32 GGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yll~Pyy~~Gsl~ 111 (302)
T KOG2345|consen 32 GGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYLLLPYYKRGSLL 111 (302)
T ss_pred CCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEEEeehhccccHH
Confidence 889889888753 44455554433 34678889999999999999999999998865443 89999999999999
Q ss_pred hhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHcCCC-eeeccCCCCCeeecCCCCeEEccccccccCCCC---------
Q 014484 74 KHLFHW--ETQPMKWAMRLRVALYLAQALEYCSSKGR-ALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--------- 141 (423)
Q Consensus 74 ~~i~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~~-iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--------- 141 (423)
+.+++. .+..+++.+++.|+.+|++||++||+..+ +.||||||.|||+++.+.+++.|||.+....-.
T Consensus 112 d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i~~~~~a~~ 191 (302)
T KOG2345|consen 112 DEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQIEGSRQALR 191 (302)
T ss_pred HHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCccccceEeechHHHHH
Confidence 998743 45579999999999999999999999864 999999999999999999999999988755421
Q ss_pred ----CccccCcccCCccccc---cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhh-hccccccCCCChhH
Q 014484 142 ----KSYSTNLAFTPPEYMR---TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLL-LMDSALEGHFSNDE 213 (423)
Q Consensus 142 ----~~~~~t~~y~aPE~~~---~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 213 (423)
.....|..|+|||.+. +...+.++|||||||+||.|+.|..||..... .+..+.. +....+..+-...+
T Consensus 192 lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~---~GgSlaLAv~n~q~s~P~~~~y 268 (302)
T KOG2345|consen 192 LQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ---QGGSLALAVQNAQISIPNSSRY 268 (302)
T ss_pred HHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh---cCCeEEEeeeccccccCCCCCc
Confidence 1234689999999876 44588999999999999999999988865311 1111111 11223333333458
Q ss_pred HHHHHHHHHHhcccCcCCCCCHHHHHHHHHhh
Q 014484 214 GTELVRLASRCLQSEARERPNAKSLVISLMSL 245 (423)
Q Consensus 214 ~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~ 245 (423)
++.+.++|++||+.||.+||++.+++.++..+
T Consensus 269 se~l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 269 SEALHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred cHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 89999999999999999999999999998765
|
|
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-38 Score=294.81 Aligned_cols=239 Identities=19% Similarity=0.273 Sum_probs=193.4
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.+. +..+++|.+.... .....+.+|+.++..++|+||+.+++.+..++..++||||++|++|.++
T Consensus 11 G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~ 90 (285)
T cd05630 11 GGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFH 90 (285)
T ss_pred CCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEecCCCcHHHH
Confidence 899999999885 5567777664432 2234577899999999999999999999999999999999999999998
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC---ccccCcccCC
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK---SYSTNLAFTP 152 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---~~~~t~~y~a 152 (423)
+.......+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++....... ...|+..|+|
T Consensus 91 l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~-iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~g~~~y~a 169 (285)
T cd05630 91 IYHMGEAGFEEGRAVFYAAEICCGLEDLHQER-IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMA 169 (285)
T ss_pred HHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC-EEeCCCCHHHEEECCCCCEEEeeccceeecCCCccccCCCCCccccC
Confidence 86544456999999999999999999999999 9999999999999999999999999987654332 2467899999
Q ss_pred ccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCC
Q 014484 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (423)
Q Consensus 153 PE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (423)
||.+.+..++.++||||+||++|+|++|..||....... .......... .....++...++++.+++.+||+.||.+|
T Consensus 170 PE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~R 247 (285)
T cd05630 170 PEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI-KREEVERLVK-EVQEEYSEKFSPDARSLCKMLLCKDPKER 247 (285)
T ss_pred hHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccc-hHHHHHhhhh-hhhhhcCccCCHHHHHHHHHHhhcCHHHc
Confidence 999998889999999999999999999999887532110 0011111111 11122344567789999999999999999
Q ss_pred CC-----HHHHHHHHH
Q 014484 233 PN-----AKSLVISLM 243 (423)
Q Consensus 233 ps-----~~~vl~~l~ 243 (423)
|| ++++++|-.
T Consensus 248 ~s~~~~~~~~~~~h~~ 263 (285)
T cd05630 248 LGCQGGGAREVKEHPL 263 (285)
T ss_pred cCCCCCchHHHHcChh
Confidence 99 899998754
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-38 Score=299.73 Aligned_cols=231 Identities=18% Similarity=0.193 Sum_probs=186.2
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHH-HHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAK-AVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||.+.+. +..+++|++.... .....+..|.. +++.++||||+++++++..++..++||||++|++|..
T Consensus 6 G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~ 85 (325)
T cd05604 6 GSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGGELFF 85 (325)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCCCCHHH
Confidence 899999999874 6678888775432 23345556655 4677899999999999999999999999999999998
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCC----CCccccCccc
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNLAF 150 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~~t~~y 150 (423)
++.. .+.+++..+..++.||+.||.|||++| |+||||||+|||++.++.++|+|||+++.... .....||+.|
T Consensus 86 ~l~~--~~~~~~~~~~~~~~qi~~al~~lH~~g-ivH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y 162 (325)
T cd05604 86 HLQR--ERSFPEPRARFYAAEIASALGYLHSIN-IVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFCGTPEY 162 (325)
T ss_pred HHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcccccCChhh
Confidence 8853 557999999999999999999999999 99999999999999999999999999875322 2335689999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcC
Q 014484 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (423)
Q Consensus 151 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (423)
+|||.+.+..++.++|||||||++|+|++|..||........ ........ ...++..+..+.+++.+||+.||.
T Consensus 163 ~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~----~~~~~~~~--~~~~~~~~~~~~~ll~~ll~~~p~ 236 (325)
T cd05604 163 LAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEM----YDNILHKP--LVLRPGASLTAWSILEELLEKDRQ 236 (325)
T ss_pred CCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHH----HHHHHcCC--ccCCCCCCHHHHHHHHHHhccCHH
Confidence 999999988999999999999999999999998875422211 11111111 122334677899999999999999
Q ss_pred CCCCHH----HHHHH
Q 014484 231 ERPNAK----SLVIS 241 (423)
Q Consensus 231 ~Rps~~----~vl~~ 241 (423)
+||++. +++.|
T Consensus 237 ~R~~~~~~~~~i~~h 251 (325)
T cd05604 237 RRLGAKEDFLEIQEH 251 (325)
T ss_pred hcCCCCCCHHHHhcC
Confidence 999875 55544
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-38 Score=288.11 Aligned_cols=231 Identities=23% Similarity=0.327 Sum_probs=185.7
Q ss_pred CCCCccceeeeecce------------eeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCC
Q 014484 2 GGRCSKFSICWFHCH------------LKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPN 69 (423)
Q Consensus 2 G~~g~v~~~~~~~~~------------~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 69 (423)
|+||.||++.+.... ++.+++.........+.+|+.+++.++||||+++++++.. ...++||||+++
T Consensus 6 G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~ 84 (259)
T cd05037 6 GTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVEEYVKF 84 (259)
T ss_pred cccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEEEEcCCC
Confidence 899999999986433 5556555444446788999999999999999999999988 778999999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCC-------CeEEccccccccCCCCC
Q 014484 70 ETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG-------NPRLSSFGLMKNSRDGK 142 (423)
Q Consensus 70 ~~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~-------~~kl~Dfg~~~~~~~~~ 142 (423)
++|.+++... ...+++..+..++.||+.||.|||+++ ++||||||+||+++.++ .++|+|||++.......
T Consensus 85 ~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~~~ 162 (259)
T cd05037 85 GPLDVFLHRE-KNNVSLHWKLDVAKQLASALHYLEDKK-LVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSRE 162 (259)
T ss_pred CcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHhhCC-eecccCccceEEEecCccccCCceeEEeCCCCccccccccc
Confidence 9999999642 336899999999999999999999999 99999999999999887 79999999998776655
Q ss_pred ccccCcccCCccccccC--CCCCCcceehhHHHHHHHhhC-CCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHH
Q 014484 143 SYSTNLAFTPPEYMRTG--RVTPESVVYSFGTMLLDLLSG-KHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVR 219 (423)
Q Consensus 143 ~~~~t~~y~aPE~~~~~--~~~~~~Di~slG~~l~el~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 219 (423)
...++..|+|||.+.+. .++.++|||||||++|+|++| ..|+...... ....... . ....+......+.+
T Consensus 163 ~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~--~~~~~~~--~---~~~~~~~~~~~~~~ 235 (259)
T cd05037 163 ERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSS--EKERFYQ--D---QHRLPMPDCAELAN 235 (259)
T ss_pred ccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCch--hHHHHHh--c---CCCCCCCCchHHHH
Confidence 66678889999998876 689999999999999999996 4444332111 1111110 1 11112222378999
Q ss_pred HHHHhcccCcCCCCCHHHHHHHH
Q 014484 220 LASRCLQSEARERPNAKSLVISL 242 (423)
Q Consensus 220 li~~cl~~dp~~Rps~~~vl~~l 242 (423)
++.+||..+|.+|||+.++++.|
T Consensus 236 li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 236 LINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred HHHHHhccChhhCCCHHHHHHhc
Confidence 99999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-38 Score=290.62 Aligned_cols=236 Identities=19% Similarity=0.284 Sum_probs=190.4
Q ss_pred CCCCccceeeeec--------ceeeeeecCCCh--hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCC
Q 014484 2 GGRCSKFSICWFH--------CHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNET 71 (423)
Q Consensus 2 G~~g~v~~~~~~~--------~~~~~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 71 (423)
|+||.||.+.+.. ..+++|.+.... .....+.+|+.+++.++||||+++++++...+..++||||+++++
T Consensus 6 g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~ 85 (269)
T cd05044 6 GAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELMEGGD 85 (269)
T ss_pred ccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEeccCCCc
Confidence 8999999988753 346666654432 345678899999999999999999999999999999999999999
Q ss_pred HHhhhccC-----CCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCC-----CeEEccccccccCCCC
Q 014484 72 LAKHLFHW-----ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG-----NPRLSSFGLMKNSRDG 141 (423)
Q Consensus 72 L~~~i~~~-----~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~-----~~kl~Dfg~~~~~~~~ 141 (423)
|.+++.+. ....+++..+..++.|++.||.|||+++ ++|+||||+||+++.++ .++|+|||+++.....
T Consensus 86 L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~ 164 (269)
T cd05044 86 LLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH-FIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKS 164 (269)
T ss_pred HHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC-cccCCCChheEEEecCCCCCCcceEECCcccccccccc
Confidence 99998642 2234788999999999999999999999 99999999999999877 8999999998755432
Q ss_pred ------CccccCcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHH
Q 014484 142 ------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEG 214 (423)
Q Consensus 142 ------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (423)
....++..|+|||.+.++.++.++|||||||++|+|++ |..||...... .....+........+...+
T Consensus 165 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 239 (269)
T cd05044 165 DYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQ-----EVLQHVTAGGRLQKPENCP 239 (269)
T ss_pred cccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHH-----HHHHHHhcCCccCCcccch
Confidence 12234678999999998889999999999999999998 88877643211 1111111122223445567
Q ss_pred HHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 215 TELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 215 ~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
..+.+++.+||..+|.+||++.++++.|.
T Consensus 240 ~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 240 DKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred HHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 88999999999999999999999998875
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-38 Score=284.28 Aligned_cols=235 Identities=21% Similarity=0.311 Sum_probs=190.9
Q ss_pred CCCCccceeeee-cceeeeeecCCCh--hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICWF-HCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~~-~~~~~~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
|+||.||++... +..+++|.+.... .....+.+|++++..++||||+++++++...+..++||||+++++|.+++..
T Consensus 6 g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~ 85 (250)
T cd05085 6 GNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLSFLRK 85 (250)
T ss_pred CCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHHHHHHh
Confidence 899999999753 4556777654432 3345788999999999999999999999999999999999999999999864
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC-----ccccCcccCCc
Q 014484 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-----SYSTNLAFTPP 153 (423)
Q Consensus 79 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-----~~~~t~~y~aP 153 (423)
....+++..+..++.|++.+|.|||+++ ++||||||+||+++.++.++|+|||++....... ...++..|+||
T Consensus 86 -~~~~~~~~~~~~~~~~i~~~l~~lH~~~-~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aP 163 (250)
T cd05085 86 -KKDELKTKQLVKFALDAAAGMAYLESKN-CIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAP 163 (250)
T ss_pred -cCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCcccccCH
Confidence 2346899999999999999999999999 9999999999999999999999999987544321 12335679999
Q ss_pred cccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCC
Q 014484 154 EYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (423)
Q Consensus 154 E~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (423)
|.+.+..++.++||||||+++|++++ |..||......... ..+........+..++.++.+++.+||..+|++|
T Consensus 164 E~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R 238 (250)
T cd05085 164 EALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAR-----EQVEKGYRMSCPQKCPDDVYKVMQRCWDYKPENR 238 (250)
T ss_pred HHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHH-----HHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccC
Confidence 99988889999999999999999998 88777654222111 1111122223445567889999999999999999
Q ss_pred CCHHHHHHHHH
Q 014484 233 PNAKSLVISLM 243 (423)
Q Consensus 233 ps~~~vl~~l~ 243 (423)
||+.++++.|.
T Consensus 239 p~~~~l~~~l~ 249 (250)
T cd05085 239 PKFSELQKELA 249 (250)
T ss_pred CCHHHHHHHhc
Confidence 99999998763
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-38 Score=289.44 Aligned_cols=239 Identities=18% Similarity=0.255 Sum_probs=191.3
Q ss_pred CCCCccceeeee--cc----eeeeeecCC--ChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHH
Q 014484 2 GGRCSKFSICWF--HC----HLKSSVLES--SDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLA 73 (423)
Q Consensus 2 G~~g~v~~~~~~--~~----~~~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 73 (423)
|+||.||++.+. +. .+++|++.. .......+.+|+.++..++||||+.+++++... ..+++|||+++|+|.
T Consensus 18 G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~l~~~~~~~g~l~ 96 (279)
T cd05109 18 GAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS-TVQLVTQLMPYGCLL 96 (279)
T ss_pred CCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-CcEEEEEcCCCCCHH
Confidence 899999999874 22 256666643 333466788999999999999999999999754 578999999999999
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCCc------cccC
Q 014484 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS------YSTN 147 (423)
Q Consensus 74 ~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~------~~~t 147 (423)
+++.. ..+.+++..++.++.|++.||.|||+++ ++||||||+||++++++.++|+|||+++....... ..++
T Consensus 97 ~~l~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~-iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~~~~~~~~~~ 174 (279)
T cd05109 97 DYVRE-NKDRIGSQDLLNWCVQIAKGMSYLEEVR-LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVP 174 (279)
T ss_pred HHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccccceEEEcCCCcEEECCCCceeecccccceeecCCCccc
Confidence 99864 2346899999999999999999999999 99999999999999999999999999886543221 2235
Q ss_pred cccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcc
Q 014484 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (423)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (423)
..|+|||.+.+..++.++|||||||++|||++ |..|+...... .....+........+..++.++.+++.+||.
T Consensus 175 ~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 249 (279)
T cd05109 175 IKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAR-----EIPDLLEKGERLPQPPICTIDVYMIMVKCWM 249 (279)
T ss_pred hhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH-----HHHHHHHCCCcCCCCccCCHHHHHHHHHHcC
Confidence 68999999988889999999999999999998 77776543211 1111222222223344567889999999999
Q ss_pred cCcCCCCCHHHHHHHHHhhhhh
Q 014484 227 SEARERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 227 ~dp~~Rps~~~vl~~l~~~~~~ 248 (423)
.||+.||++.+++..+..+...
T Consensus 250 ~dp~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05109 250 IDSECRPRFRELVDEFSRMARD 271 (279)
T ss_pred CChhhCcCHHHHHHHHHHhhcC
Confidence 9999999999999998877655
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-38 Score=288.83 Aligned_cols=239 Identities=18% Similarity=0.173 Sum_probs=180.7
Q ss_pred CCCCccceeeeec----ceeeeeecCCC--hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWFH----CHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~~----~~~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.... ..++++.+... ......+.+|+.+++.++||||+++++++......++||||+++|+|.++
T Consensus 6 G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~L~~~ 85 (269)
T cd05042 6 GWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGDLKNY 85 (269)
T ss_pred cCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCcHHHH
Confidence 8999999987532 23455544332 23355788999999999999999999999999999999999999999999
Q ss_pred hccCC---CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC------Ccccc
Q 014484 76 LFHWE---TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------KSYST 146 (423)
Q Consensus 76 i~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~------~~~~~ 146 (423)
+.... ....++..+..++.||+.||.|||+++ |+||||||+||+++.++.++|+|||++...... ....+
T Consensus 86 l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~ 164 (269)
T cd05042 86 LRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD-FIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKDCHAV 164 (269)
T ss_pred HHhccccccccccHHHHHHHHHHHHHHHHHHHhcC-EecccccHhheEecCCCcEEEeccccccccccchheeccCCCCC
Confidence 86432 123567888999999999999999999 999999999999999999999999998653322 22335
Q ss_pred CcccCCcccccc-------CCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHH
Q 014484 147 NLAFTPPEYMRT-------GRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELV 218 (423)
Q Consensus 147 t~~y~aPE~~~~-------~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 218 (423)
+..|+|||++.. ..++.++|||||||++|||++ |..|+.........................+...+..+.
T Consensus 165 ~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (269)
T cd05042 165 PLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKYSDRWY 244 (269)
T ss_pred cccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccCCHHHH
Confidence 677999998743 346889999999999999999 566665432111111111111111112223445677889
Q ss_pred HHHHHhcccCcCCCCCHHHHHHHH
Q 014484 219 RLASRCLQSEARERPNAKSLVISL 242 (423)
Q Consensus 219 ~li~~cl~~dp~~Rps~~~vl~~l 242 (423)
+++..|| .||++|||+++|++.|
T Consensus 245 ~~~~~~~-~dp~~Rpt~~~v~~~l 267 (269)
T cd05042 245 EVMQFCW-LDPETRPTAEEVHELL 267 (269)
T ss_pred HHHHHHh-cCcccccCHHHHHHHh
Confidence 9999999 5999999999999876
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-39 Score=305.96 Aligned_cols=233 Identities=14% Similarity=0.130 Sum_probs=188.0
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+... +..+++|++.... .....+..|+.++..++||||+++++++.+++..|+||||++||+|.++
T Consensus 12 G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~ 91 (360)
T cd05627 12 GAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIMEFLPGGDMMTL 91 (360)
T ss_pred CCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCCccHHHH
Confidence 899999999874 6778888775432 2345677899999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC--------------
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-------------- 141 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-------------- 141 (423)
+.+ .+.+++..+..++.|++.||.|||++| |+||||||+|||++.+|.++|+|||+++.....
T Consensus 92 l~~--~~~l~~~~~~~~~~qi~~~L~~lH~~g-ivHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~ 168 (360)
T cd05627 92 LMK--KDTLSEEATQFYIAETVLAIDAIHQLG-FIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPP 168 (360)
T ss_pred HHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEccCCCHHHEEECCCCCEEEeeccCCcccccccccccccccccCCc
Confidence 854 456999999999999999999999999 999999999999999999999999998643211
Q ss_pred -------------------------CccccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhch
Q 014484 142 -------------------------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKN 196 (423)
Q Consensus 142 -------------------------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~ 196 (423)
....||+.|+|||++.+..++.++|||||||++|||++|..||........
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~---- 244 (360)
T cd05627 169 SDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQET---- 244 (360)
T ss_pred ccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCCCCHHHH----
Confidence 124589999999999988999999999999999999999999876432211
Q ss_pred hhhhccccccCCCCh--hHHHHHHHHHHHhcccCcCCCC---CHHHHHHHH
Q 014484 197 FLLLMDSALEGHFSN--DEGTELVRLASRCLQSEARERP---NAKSLVISL 242 (423)
Q Consensus 197 ~~~~~~~~~~~~~~~--~~~~~l~~li~~cl~~dp~~Rp---s~~~vl~~l 242 (423)
...+........++. ..++++.++|.+|+. ||.+|+ ++++++.|-
T Consensus 245 ~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~hp 294 (360)
T cd05627 245 YRKVMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSHP 294 (360)
T ss_pred HHHHHcCCCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcCC
Confidence 111111111111222 356789999999874 999998 478888774
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-38 Score=285.74 Aligned_cols=236 Identities=19% Similarity=0.307 Sum_probs=192.9
Q ss_pred CCCCccceeeee-cceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccCC
Q 014484 2 GGRCSKFSICWF-HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80 (423)
Q Consensus 2 G~~g~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~ 80 (423)
|+||.||.+.+. +..+++|.+.........+.+|+++++.++|+||+++++++.. ...+++|||+++++|.+++....
T Consensus 17 g~~~~vy~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~~~~~~ 95 (260)
T cd05073 17 GQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDE 95 (260)
T ss_pred ccceEEEEEEecCCccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeCCCCcHHHHHHhCC
Confidence 899999999764 4557777776666666789999999999999999999999987 67899999999999999997545
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC-----ccccCcccCCccc
Q 014484 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-----SYSTNLAFTPPEY 155 (423)
Q Consensus 81 ~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-----~~~~t~~y~aPE~ 155 (423)
+..+++..+..++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||.+....... ...++..|+|||.
T Consensus 96 ~~~~~~~~~~~~~~~l~~aL~~lH~~~-i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~y~~PE~ 174 (260)
T cd05073 96 GSKQPLPKLIDFSAQIAEGMAFIEQRN-YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEA 174 (260)
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHhCC-ccccccCcceEEEcCCCcEEECCCcceeeccCCCcccccCCcccccccCHhH
Confidence 566889999999999999999999999 9999999999999999999999999987554322 1234567999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCC
Q 014484 156 MRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (423)
Q Consensus 156 ~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (423)
+.+..++.++|+|||||++|++++ |..||........ ............+...+.++.+++.+||+.+|++||+
T Consensus 175 ~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~ 249 (260)
T cd05073 175 INFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEV-----IRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPT 249 (260)
T ss_pred hccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHH-----HHHHhCCCCCCCcccCCHHHHHHHHHHcccCcccCcC
Confidence 988889999999999999999999 7877765321111 1111111222233456778999999999999999999
Q ss_pred HHHHHHHHHh
Q 014484 235 AKSLVISLMS 244 (423)
Q Consensus 235 ~~~vl~~l~~ 244 (423)
+.+++..|..
T Consensus 250 ~~~l~~~L~~ 259 (260)
T cd05073 250 FEYIQSVLDD 259 (260)
T ss_pred HHHHHHHHhc
Confidence 9999998864
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-38 Score=286.42 Aligned_cols=234 Identities=20% Similarity=0.313 Sum_probs=192.2
Q ss_pred CCCCccceeeee-cceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccCC
Q 014484 2 GGRCSKFSICWF-HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80 (423)
Q Consensus 2 G~~g~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~ 80 (423)
|+||.||++.+. +..+++|.+.........+.+|++++++++||||+++++++......++||||+.+++|.+++.. .
T Consensus 15 g~~g~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~-~ 93 (256)
T cd05112 15 GQFGLVWLGYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEHGCLSDYLRA-Q 93 (256)
T ss_pred cccceEEEEEEeCCCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCCCcHHHHHHh-C
Confidence 899999999886 66788887776666667899999999999999999999999999999999999999999999864 2
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC-----ccccCcccCCccc
Q 014484 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-----SYSTNLAFTPPEY 155 (423)
Q Consensus 81 ~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-----~~~~t~~y~aPE~ 155 (423)
.+.++++.+..++.|++.++.+||+++ ++|+||||+||+++.++.++|+|||++....... ...++..|+|||.
T Consensus 94 ~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~aPe~ 172 (256)
T cd05112 94 RGKFSQETLLGMCLDVCEGMAYLESSN-VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEV 172 (256)
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHCC-ccccccccceEEEcCCCeEEECCCcceeecccCcccccCCCccchhhcCHhH
Confidence 346899999999999999999999999 9999999999999999999999999987554321 2234568999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCC
Q 014484 156 MRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (423)
Q Consensus 156 ~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (423)
+.+..++.++|+||||+++|+|++ |..||....... ....+........+...+..+.+++.+||+.+|++|||
T Consensus 173 ~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~ 247 (256)
T cd05112 173 FSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSE-----VVETINAGFRLYKPRLASQSVYELMQHCWKERPEDRPS 247 (256)
T ss_pred hccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHH-----HHHHHhCCCCCCCCCCCCHHHHHHHHHHcccChhhCCC
Confidence 988889999999999999999998 777765432111 11111111111223335678999999999999999999
Q ss_pred HHHHHHHH
Q 014484 235 AKSLVISL 242 (423)
Q Consensus 235 ~~~vl~~l 242 (423)
+.++++.|
T Consensus 248 ~~~~l~~l 255 (256)
T cd05112 248 FSLLLHQL 255 (256)
T ss_pred HHHHHHhh
Confidence 99999876
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-38 Score=303.50 Aligned_cols=235 Identities=17% Similarity=0.173 Sum_probs=188.1
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.+. +..+++|++.... .....+.+|+.++..++||||+++++++.+++..++||||++||+|.++
T Consensus 54 G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~ 133 (371)
T cd05622 54 GAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNL 133 (371)
T ss_pred cCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHH
Confidence 899999999885 5667777764322 2344677899999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-----CccccCccc
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYSTNLAF 150 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~~t~~y 150 (423)
+.. ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....||+.|
T Consensus 134 ~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~~~~~~~~gt~~y 209 (371)
T cd05622 134 MSN---YDVPEKWARFYTAEVVLALDAIHSMG-FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDY 209 (371)
T ss_pred HHh---cCCCHHHHHHHHHHHHHHHHHHHHCC-EEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCcccccCcccCccc
Confidence 853 45899999999999999999999999 999999999999999999999999998765432 245689999
Q ss_pred CCccccccCC----CCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhcccc--ccCCCChhHHHHHHHHHHHh
Q 014484 151 TPPEYMRTGR----VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSA--LEGHFSNDEGTELVRLASRC 224 (423)
Q Consensus 151 ~aPE~~~~~~----~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~c 224 (423)
+|||++.+.. ++.++|||||||++|||++|..||....... ....+.... ........++.++.++|.+|
T Consensus 210 ~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~----~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~ 285 (371)
T cd05622 210 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG----TYSKIMNHKNSLTFPDDNDISKEAKNLICAF 285 (371)
T ss_pred cCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHH----HHHHHHcCCCcccCCCcCCCCHHHHHHHHHH
Confidence 9999987543 7889999999999999999999987643211 111222111 11112235678899999999
Q ss_pred cccCcCC--CCCHHHHHHHHHh
Q 014484 225 LQSEARE--RPNAKSLVISLMS 244 (423)
Q Consensus 225 l~~dp~~--Rps~~~vl~~l~~ 244 (423)
|..++.+ |++++++++|..-
T Consensus 286 L~~~~~r~~r~~~~ei~~h~~~ 307 (371)
T cd05622 286 LTDREVRLGRNGVEEIKRHLFF 307 (371)
T ss_pred cCChhhhcCCCCHHHHhcCccc
Confidence 9844433 7899999988643
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-38 Score=287.61 Aligned_cols=240 Identities=14% Similarity=0.190 Sum_probs=194.6
Q ss_pred CCCCccceeeee--cceeeeeecCCC----hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS----DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||++.+. +..+++|.+... ......+.+|+.+++.++||||+++++++..++..+++|||+++++|.++
T Consensus 13 g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~ 92 (267)
T cd08229 13 GQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRM 92 (267)
T ss_pred cCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEEecCCCCHHHH
Confidence 889999999974 666777765432 22345788999999999999999999999999999999999999999998
Q ss_pred hccC--CCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC----ccccCcc
Q 014484 76 LFHW--ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK----SYSTNLA 149 (423)
Q Consensus 76 i~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~----~~~~t~~ 149 (423)
+... ....+++..++.++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||++....... ...++..
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~ 171 (267)
T cd08229 93 IKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR-VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPY 171 (267)
T ss_pred HHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCCEEECcchhhhccccCCcccccccCCcC
Confidence 8532 3456899999999999999999999999 9999999999999999999999999887654332 3467889
Q ss_pred cCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccC-CCChhHHHHHHHHHHHhcccC
Q 014484 150 FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEG-HFSNDEGTELVRLASRCLQSE 228 (423)
Q Consensus 150 y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~d 228 (423)
|+|||.+.+..++.++|+||||+++|+|++|..||........ .....+...... ..+...++++.+++.+||..|
T Consensus 172 ~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 248 (267)
T cd08229 172 YMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY---SLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPD 248 (267)
T ss_pred ccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHH---HHhhhhhcCCCCCCCcccccHHHHHHHHHhcCCC
Confidence 9999999888899999999999999999999988765322111 111111111111 122346788999999999999
Q ss_pred cCCCCCHHHHHHHHHhh
Q 014484 229 ARERPNAKSLVISLMSL 245 (423)
Q Consensus 229 p~~Rps~~~vl~~l~~~ 245 (423)
|++|||+.+|++.+.++
T Consensus 249 p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 249 PEKRPDITYVYDVAKRM 265 (267)
T ss_pred cccCCCHHHHHHHHhhh
Confidence 99999999999988765
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-38 Score=287.23 Aligned_cols=237 Identities=20% Similarity=0.254 Sum_probs=191.9
Q ss_pred CCCCccceeeee--c---ceeeeeecCCC--hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF--H---CHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~--~---~~~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||++... + ..+++|..... ......+..|++++..++||||+++.+++...+..++||||+++++|.+
T Consensus 16 g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 95 (268)
T cd05063 16 GEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIITEYMENGALDK 95 (268)
T ss_pred CCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEEEcCCCCCHHH
Confidence 899999999874 2 24666665443 2345678899999999999999999999999999999999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCCc-------cccC
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS-------YSTN 147 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-------~~~t 147 (423)
++.. ..+.+++.++..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++........ ...+
T Consensus 96 ~~~~-~~~~~~~~~~~~~~~~l~~al~~lH~~~-i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~ 173 (268)
T cd05063 96 YLRD-HDGEFSSYQLVGMLRGIAAGMKYLSDMN-YVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIP 173 (268)
T ss_pred HHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccchhhEEEcCCCcEEECCCccceecccccccceeccCCCcC
Confidence 9864 3356899999999999999999999999 99999999999999999999999999875543211 1124
Q ss_pred cccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcc
Q 014484 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (423)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (423)
..|+|||.+.+..++.++|||||||++|+|++ |..|+...... .....+........+..++.++.+++.+||+
T Consensus 174 ~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~-----~~~~~i~~~~~~~~~~~~~~~~~~li~~c~~ 248 (268)
T cd05063 174 IRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNH-----EVMKAINDGFRLPAPMDCPSAVYQLMLQCWQ 248 (268)
T ss_pred ceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHH-----HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcC
Confidence 57999999988889999999999999999997 88887543211 1112222222223344567889999999999
Q ss_pred cCcCCCCCHHHHHHHHHhh
Q 014484 227 SEARERPNAKSLVISLMSL 245 (423)
Q Consensus 227 ~dp~~Rps~~~vl~~l~~~ 245 (423)
.+|++||++.++++.|.++
T Consensus 249 ~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 249 QDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred CCcccCcCHHHHHHHHHhh
Confidence 9999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-39 Score=302.56 Aligned_cols=233 Identities=18% Similarity=0.166 Sum_probs=185.8
Q ss_pred CCCCccceeeee--cceeeeeecCCChh----hHHHHHHHHHHHhcC---CCCCccceEeEEEeCCceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDL----GETLNLEEAKAVGNL---RSERLANLIGCCYEADERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~----~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 72 (423)
|+||.||.+.+. +..+++|++..... ....+..|..++..+ .||||+.+++++..++..|+||||+++|+|
T Consensus 4 G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~g~L 83 (330)
T cd05586 4 GTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSGGEL 83 (330)
T ss_pred CCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCCChH
Confidence 899999999874 67788888754322 223455677777665 699999999999999999999999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCC----CCccccCc
Q 014484 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNL 148 (423)
Q Consensus 73 ~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~~t~ 148 (423)
.+++.+ .+.+++..+..++.||+.||.|||+++ |+||||||+|||++.++.++|+|||+++.... .....||+
T Consensus 84 ~~~l~~--~~~~~~~~~~~~~~qil~al~~LH~~~-ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~ 160 (330)
T cd05586 84 FWHLQK--EGRFSEDRAKFYIAELVLALEHLHKYD-IVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFCGTT 160 (330)
T ss_pred HHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccCccCCc
Confidence 998854 457999999999999999999999999 99999999999999999999999999875332 23356899
Q ss_pred ccCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCC-hhHHHHHHHHHHHhcc
Q 014484 149 AFTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFS-NDEGTELVRLASRCLQ 226 (423)
Q Consensus 149 ~y~aPE~~~~~-~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~cl~ 226 (423)
.|+|||++.+. .++.++|||||||++|+|++|..||......... ....... ..++ ..+++++.+++.+||.
T Consensus 161 ~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~----~~i~~~~--~~~~~~~~~~~~~~li~~~L~ 234 (330)
T cd05586 161 EYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMY----RNIAFGK--VRFPKNVLSDEGRQFVKGLLN 234 (330)
T ss_pred cccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHH----HHHHcCC--CCCCCccCCHHHHHHHHHHcC
Confidence 99999998765 4899999999999999999999988654222111 1111111 1122 2357789999999999
Q ss_pred cCcCCCC----CHHHHHHHHH
Q 014484 227 SEARERP----NAKSLVISLM 243 (423)
Q Consensus 227 ~dp~~Rp----s~~~vl~~l~ 243 (423)
.||.+|| ++.++++|..
T Consensus 235 ~~P~~R~~~~~~~~~ll~h~~ 255 (330)
T cd05586 235 RNPQHRLGAHRDAVELKEHPF 255 (330)
T ss_pred CCHHHCCCCCCCHHHHhcCcc
Confidence 9999998 6788877643
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-38 Score=284.23 Aligned_cols=235 Identities=22% Similarity=0.308 Sum_probs=191.9
Q ss_pred CCCCccceeeee-cceeeeeecCCChh--hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICWF-HCHLKSSVLESSDL--GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~~-~~~~~~~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
|+||.||.+.+. +..+++|....... ....+.+|++++++++|+||+++++++......++||||+.|++|.+++..
T Consensus 6 g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~ 85 (251)
T cd05041 6 GNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLLTFLRK 85 (251)
T ss_pred CCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHHHHHHh
Confidence 899999999876 67777776654332 456789999999999999999999999999999999999999999999854
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCCc------cccCcccCC
Q 014484 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS------YSTNLAFTP 152 (423)
Q Consensus 79 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~------~~~t~~y~a 152 (423)
....+++..+..++.+++.+|.|||+++ ++||||+|+||+++.++.++|+|||++........ ...+..|+|
T Consensus 86 -~~~~~~~~~~~~~~~~~~~~l~~lH~~~-i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~ 163 (251)
T cd05041 86 -KKNRLTVKKLLQMSLDAAAGMEYLESKN-CIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTA 163 (251)
T ss_pred -cCCCCCHHHHHHHHHHHHHHHHHHHhCC-EehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcceeccCC
Confidence 2346889999999999999999999999 99999999999999999999999999876542211 123567999
Q ss_pred ccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCC
Q 014484 153 PEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARE 231 (423)
Q Consensus 153 PE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (423)
||.+.++.++.++|+|||||++|+|++ |..|+....... .............+...+.++.+++.+||..+|.+
T Consensus 164 PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~ 238 (251)
T cd05041 164 PEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQ-----TRERIESGYRMPAPQLCPEEIYRLMLQCWAYDPEN 238 (251)
T ss_pred hHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHH-----HHHHHhcCCCCCCCccCCHHHHHHHHHHhccChhh
Confidence 999988889999999999999999999 666665432211 11111111222334456788999999999999999
Q ss_pred CCCHHHHHHHHH
Q 014484 232 RPNAKSLVISLM 243 (423)
Q Consensus 232 Rps~~~vl~~l~ 243 (423)
|||+.++++.|.
T Consensus 239 Rp~~~ell~~l~ 250 (251)
T cd05041 239 RPSFSEIYNELQ 250 (251)
T ss_pred CcCHHHHHHHhh
Confidence 999999998875
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-38 Score=311.44 Aligned_cols=237 Identities=20% Similarity=0.222 Sum_probs=182.4
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeC--------CceeEEEecCCCCC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEA--------DERLLVAEFMPNET 71 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--------~~~~lv~e~~~~~~ 71 (423)
|+||.||.+.+. +..+++|.+.... ....+|+.+++.++||||+++++++... ..+++||||+++ +
T Consensus 77 G~fg~Vy~~~~~~~~~~vAiK~i~~~~---~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE~~~~-~ 152 (440)
T PTZ00036 77 GSFGVVYEAICIDTSEKVAIKKVLQDP---QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVMEFIPQ-T 152 (440)
T ss_pred CCCEEEEEEEECCCCCEEEEEEEecCc---chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEEEEecCCc-c
Confidence 899999999874 5778888764433 2345799999999999999999887542 136799999976 7
Q ss_pred HHhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCC-CeEEccccccccCCCC---Cccc
Q 014484 72 LAKHLFH--WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG-NPRLSSFGLMKNSRDG---KSYS 145 (423)
Q Consensus 72 L~~~i~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~-~~kl~Dfg~~~~~~~~---~~~~ 145 (423)
|.+++.. ..+..+++..+..++.||+.||.|||+++ |+||||||+|||++.++ .+||+|||+++..... ....
T Consensus 153 l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~-IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~~~~~~~~ 231 (440)
T PTZ00036 153 VHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKF-ICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQRSVSYI 231 (440)
T ss_pred HHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCcCHHHEEEcCCCCceeeeccccchhccCCCCcccCC
Confidence 7776642 23567999999999999999999999999 99999999999998665 6999999999865432 3456
Q ss_pred cCcccCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhh-----------------------c
Q 014484 146 TNLAFTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLL-----------------------M 201 (423)
Q Consensus 146 ~t~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~-----------------------~ 201 (423)
+|+.|+|||++.+. .++.++|||||||++|||++|.+||.+.............. .
T Consensus 232 ~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 311 (440)
T PTZ00036 232 CSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVK 311 (440)
T ss_pred CCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccC
Confidence 78999999988754 58999999999999999999999887642211110000000 0
Q ss_pred cccccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 202 DSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 202 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
...+...++...++++.+||.+||++||.+|||+.++++|..
T Consensus 312 ~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~ 353 (440)
T PTZ00036 312 PKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPF 353 (440)
T ss_pred chhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChh
Confidence 000111123345678999999999999999999999998854
|
|
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-37 Score=286.86 Aligned_cols=240 Identities=20% Similarity=0.172 Sum_probs=182.5
Q ss_pred CCCCccceeeeec----ceeeeeecCCCh--hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWFH----CHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~~----~~~~~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.+.+ ..+++|.+.... .....+.+|+.++++++||||+++++++.+....++||||+++|+|.++
T Consensus 6 G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~ 85 (269)
T cd05087 6 GWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGDLKGY 85 (269)
T ss_pred cCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCcHHHH
Confidence 8999999998642 345666554332 3345788999999999999999999999999999999999999999999
Q ss_pred hccCC---CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC------Ccccc
Q 014484 76 LFHWE---TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------KSYST 146 (423)
Q Consensus 76 i~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~------~~~~~ 146 (423)
+.... ....++..+..++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||+++..... ....+
T Consensus 86 l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~ 164 (269)
T cd05087 86 LRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN-FIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPDQLWV 164 (269)
T ss_pred HHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC-EeccccCcceEEEcCCCcEEECCccccccccCcceeecCCCcCC
Confidence 86321 234667788899999999999999999 999999999999999999999999998654322 12345
Q ss_pred CcccCCccccccC-------CCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHH
Q 014484 147 NLAFTPPEYMRTG-------RVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELV 218 (423)
Q Consensus 147 t~~y~aPE~~~~~-------~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 218 (423)
+..|+|||.+.+. .++.++|+|||||++|||++ |..||......................+......++.+.
T Consensus 165 ~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (269)
T cd05087 165 PLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPLSDRWY 244 (269)
T ss_pred cccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCCChHHH
Confidence 7789999988632 35789999999999999996 888876432221111111111111111122224567799
Q ss_pred HHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 219 RLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 219 ~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
+++.+|| .+|++|||+++|+..|.
T Consensus 245 ~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 245 EVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred HHHHHHh-cCcccCCCHHHHHHHhc
Confidence 9999999 68999999999998763
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-40 Score=283.41 Aligned_cols=233 Identities=15% Similarity=0.199 Sum_probs=198.3
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW 79 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~ 79 (423)
|+||+||++... |..+++|.++... +.+.+..||.+++++++|+||++||.+.....+|+|||||--|+..+.++.
T Consensus 44 GSYGSV~KAIH~EsG~v~AIK~VPV~s-DLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGAGSiSDI~R~- 121 (502)
T KOG0574|consen 44 GSYGSVHKAIHRESGHVLAIKKVPVDT-DLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAGSISDIMRA- 121 (502)
T ss_pred CcchHHHHHHHhccCcEEEEEecCccc-hHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCCCcHHHHHHH-
Confidence 899999999885 6777777765543 567888999999999999999999999999999999999999999999864
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccCCccc
Q 014484 80 ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPPEY 155 (423)
Q Consensus 80 ~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~aPE~ 155 (423)
..+++++.++..+++..+.||+|||... -||||||..|||++-+|++||+|||.+-.+... .+..||+.|||||+
T Consensus 122 R~K~L~E~EIs~iL~~TLKGL~YLH~~~-KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEV 200 (502)
T KOG0574|consen 122 RRKPLSEQEISAVLRDTLKGLQYLHDLK-KIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEV 200 (502)
T ss_pred hcCCccHHHHHHHHHHHHhHHHHHHHHH-HHHhhcccccEEEcccchhhhhhccccchhhhhHHhhCccccCcccccHHH
Confidence 4678999999999999999999999998 999999999999999999999999998776543 45679999999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCC--CChhHHHHHHHHHHHhcccCcCCCC
Q 014484 156 MRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGH--FSNDEGTELVRLASRCLQSEARERP 233 (423)
Q Consensus 156 ~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dp~~Rp 233 (423)
+..-.|+.++||||||++..||..|++|+..- ...+.+ -+++....+. -|..++.++-+|++.||.+.|++|.
T Consensus 201 I~EIGY~~~ADIWSLGITaIEMAEG~PPYsDI----HPMRAI-FMIPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~ 275 (502)
T KOG0574|consen 201 IEEIGYDTKADIWSLGITAIEMAEGRPPYSDI----HPMRAI-FMIPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERK 275 (502)
T ss_pred HHHhccchhhhHhhhcchhhhhhcCCCCcccc----ccccee-EeccCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHH
Confidence 99889999999999999999999999887542 111111 1122222222 3456789999999999999999999
Q ss_pred CHHHHHHHH
Q 014484 234 NAKSLVISL 242 (423)
Q Consensus 234 s~~~vl~~l 242 (423)
|+.++++|-
T Consensus 276 TA~~L~~H~ 284 (502)
T KOG0574|consen 276 TALRLCEHT 284 (502)
T ss_pred HHHHHhhhh
Confidence 999999883
|
|
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=285.93 Aligned_cols=237 Identities=21% Similarity=0.260 Sum_probs=191.2
Q ss_pred CCCCccceeeee-----cceeeeeecCCC--hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF-----HCHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~-----~~~~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||.+.+. ...++++.+... ......+.+|+.++..++||||+++++++..++..++||||+++++|.+
T Consensus 15 g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 94 (267)
T cd05066 15 GEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDA 94 (267)
T ss_pred cCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcCCCCCHHH
Confidence 899999999874 224666666443 2345688999999999999999999999999999999999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCCc-------cccC
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS-------YSTN 147 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-------~~~t 147 (423)
++.. ....+++.++..++.|++.||.+||+++ ++||||||+||+++.++.++|+|||++........ ..++
T Consensus 95 ~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~ 172 (267)
T cd05066 95 FLRK-HDGQFTVIQLVGMLRGIASGMKYLSDMG-YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 172 (267)
T ss_pred HHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeehhhchhcEEECCCCeEEeCCCCcccccccccceeeecCCCccc
Confidence 9964 3356899999999999999999999999 99999999999999999999999999876543321 1124
Q ss_pred cccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcc
Q 014484 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (423)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (423)
..|++||.+.+..++.++|+|||||++|++++ |..||........ ...+........+..+++.+.+++.+||+
T Consensus 173 ~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 247 (267)
T cd05066 173 IRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDV-----IKAIEEGYRLPAPMDCPAALHQLMLDCWQ 247 (267)
T ss_pred eeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHH-----HHHHhCCCcCCCCCCCCHHHHHHHHHHcc
Confidence 57999999998889999999999999999886 8887755321111 11111111222334567889999999999
Q ss_pred cCcCCCCCHHHHHHHHHhh
Q 014484 227 SEARERPNAKSLVISLMSL 245 (423)
Q Consensus 227 ~dp~~Rps~~~vl~~l~~~ 245 (423)
.+|.+|||+.++++.|..+
T Consensus 248 ~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 248 KDRNERPKFEQIVSILDKL 266 (267)
T ss_pred cCchhCCCHHHHHHHHHhh
Confidence 9999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=288.55 Aligned_cols=242 Identities=18% Similarity=0.264 Sum_probs=189.5
Q ss_pred CCCCccceeeee------cceeeeeecCCC--hhhHHHHHHHHHHHhcCCCCCccceEeEEEeC--CceeEEEecCCCCC
Q 014484 2 GGRCSKFSICWF------HCHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEA--DERLLVAEFMPNET 71 (423)
Q Consensus 2 G~~g~v~~~~~~------~~~~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e~~~~~~ 71 (423)
|+||.||.+.+. +..+++|.+... ......+.+|+.+++.++||||+++.+++... ...++||||++|++
T Consensus 15 g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~g~~ 94 (284)
T cd05079 15 GHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGS 94 (284)
T ss_pred CCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEEEEEccCCCC
Confidence 899999988752 556777776543 23356789999999999999999999999875 45789999999999
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC-------cc
Q 014484 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-------SY 144 (423)
Q Consensus 72 L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-------~~ 144 (423)
|.+++.+. ...+++..++.++.|++.||.|||+++ ++||||||+||+++.++.++|+|||+++...... ..
T Consensus 95 L~~~l~~~-~~~~~~~~~~~i~~~i~~aL~~lH~~g-i~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 172 (284)
T cd05079 95 LKEYLPRN-KNKINLKQQLKYAVQICKGMDYLGSRQ-YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDL 172 (284)
T ss_pred HHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecccchheEEEcCCCCEEECCCccccccccCccceeecCCC
Confidence 99998542 346899999999999999999999999 9999999999999999999999999987654322 23
Q ss_pred ccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHh----------hhchhhhhccccccCCCChhHH
Q 014484 145 STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLI----------RSKNFLLLMDSALEGHFSNDEG 214 (423)
Q Consensus 145 ~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~ 214 (423)
.++..|+|||.+.+..++.++|||||||++|+|+++..|......... .................+..++
T Consensus 173 ~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (284)
T cd05079 173 DSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRLPRPPNCP 252 (284)
T ss_pred CCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCccCCCCCCCC
Confidence 456789999999888899999999999999999998754322100000 0000111111111222344567
Q ss_pred HHHHHHHHHhcccCcCCCCCHHHHHHHHHhh
Q 014484 215 TELVRLASRCLQSEARERPNAKSLVISLMSL 245 (423)
Q Consensus 215 ~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~ 245 (423)
.++.+|+.+||+.||++|||+.+++..++.+
T Consensus 253 ~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 253 EEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 8899999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-38 Score=296.62 Aligned_cols=231 Identities=15% Similarity=0.247 Sum_probs=188.4
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcCC-CCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLR-SERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||.+.+. +..+++|++.... .....+..|+.++..+. |++|+++++++...+..|+||||++||+|.+
T Consensus 11 G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~Ey~~~g~L~~ 90 (323)
T cd05615 11 GSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMY 90 (323)
T ss_pred cCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEcCCCCCcHHH
Confidence 899999999875 6678888776432 23456778999998885 5778899999999999999999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCC----CCccccCccc
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNLAF 150 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~~t~~y 150 (423)
++.. .+.+++.++..++.|++.||.|||+++ ++||||||+|||++.++.++|+|||+++.... .....||+.|
T Consensus 91 ~i~~--~~~l~~~~~~~i~~qi~~al~~lH~~~-ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~~~~~~gt~~y 167 (323)
T cd05615 91 HIQQ--VGKFKEPQAVFYAAEISVGLFFLHRRG-IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTTRTFCGTPDY 167 (323)
T ss_pred HHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHeEECCCCCEEEeccccccccCCCCccccCccCCccc
Confidence 9853 456999999999999999999999999 99999999999999999999999999875432 2234589999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcC
Q 014484 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (423)
Q Consensus 151 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (423)
+|||++.+..++.++||||+||++|+|++|..||........ ...+... ...++...+.++.+++.+||+.||.
T Consensus 168 ~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~----~~~i~~~--~~~~p~~~~~~~~~li~~~l~~~p~ 241 (323)
T cd05615 168 IAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDEL----FQSIMEH--NVSYPKSLSKEAVSICKGLMTKHPS 241 (323)
T ss_pred cCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHH----HHHHHhC--CCCCCccCCHHHHHHHHHHcccCHh
Confidence 999999988899999999999999999999998876422211 1111111 1234556678899999999999999
Q ss_pred CCCCH-----HHHHHH
Q 014484 231 ERPNA-----KSLVIS 241 (423)
Q Consensus 231 ~Rps~-----~~vl~~ 241 (423)
+|++. +++++|
T Consensus 242 ~R~~~~~~~~~~i~~h 257 (323)
T cd05615 242 KRLGCGPEGERDIREH 257 (323)
T ss_pred hCCCCCCCCHHHHhcC
Confidence 99974 555554
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=289.60 Aligned_cols=237 Identities=20% Similarity=0.268 Sum_probs=189.6
Q ss_pred CCCCccceeeee-------cceeeeeecCCCh--hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICWF-------HCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~~-------~~~~~~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 72 (423)
|+||.||.+.+. ...+++|.+.... .....+.+|+.++..++||||+++++++..++..++||||+++++|
T Consensus 16 g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 95 (288)
T cd05050 16 GAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMCLLFEYMAYGDL 95 (288)
T ss_pred cccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccEEEEecCCCCCH
Confidence 899999998863 3556777665432 3456788999999999999999999999999999999999999999
Q ss_pred HhhhccCC--------------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccc
Q 014484 73 AKHLFHWE--------------------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSF 132 (423)
Q Consensus 73 ~~~i~~~~--------------------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Df 132 (423)
.+++.... ...+++..++.++.|++.||.|||+++ ++||||||+||+++.++.++|+||
T Consensus 96 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~-i~H~dl~p~nil~~~~~~~~l~df 174 (288)
T cd05050 96 NEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK-FVHRDLATRNCLVGENMVVKIADF 174 (288)
T ss_pred HHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC-eecccccHhheEecCCCceEECcc
Confidence 99986321 124788899999999999999999999 999999999999999999999999
Q ss_pred cccccCCCC------CccccCcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccc
Q 014484 133 GLMKNSRDG------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSAL 205 (423)
Q Consensus 133 g~~~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (423)
|++...... .....+..|+|||.+.+..++.++|||||||++|+|++ |..||....... ....+....
T Consensus 175 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~-----~~~~~~~~~ 249 (288)
T cd05050 175 GLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEE-----VIYYVRDGN 249 (288)
T ss_pred ccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH-----HHHHHhcCC
Confidence 998754322 12234567999999988889999999999999999998 666665432111 111111111
Q ss_pred cCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHh
Q 014484 206 EGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMS 244 (423)
Q Consensus 206 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~ 244 (423)
....+..++.++.+++.+||+.||.+|||+.++++.|++
T Consensus 250 ~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 250 VLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 122344567889999999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-38 Score=287.80 Aligned_cols=234 Identities=16% Similarity=0.202 Sum_probs=187.9
Q ss_pred CCCCccceeeee--cceeeeeecCCCh-hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
|+||.||++.+. +..+++|++.... .....+.+|+.++.+++||||+++++++..++..++||||+++++|.+++..
T Consensus 20 g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~ 99 (267)
T cd06646 20 GTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHV 99 (267)
T ss_pred CCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCCCCCcHHHHHHh
Confidence 899999999874 5667777765433 3345678899999999999999999999999999999999999999998853
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccCCcc
Q 014484 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPPE 154 (423)
Q Consensus 79 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~aPE 154 (423)
...+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||++...... ....++..|+|||
T Consensus 100 --~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE 176 (267)
T cd06646 100 --TGPLSELQIAYVCRETLQGLAYLHSKG-KMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRKSFIGTPYWMAPE 176 (267)
T ss_pred --cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEECCCCCEEECcCccceeecccccccCccccCccccCHh
Confidence 456899999999999999999999999 999999999999999999999999998765432 2345788999999
Q ss_pred ccc---cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhcccccc---CCCChhHHHHHHHHHHHhcccC
Q 014484 155 YMR---TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALE---GHFSNDEGTELVRLASRCLQSE 228 (423)
Q Consensus 155 ~~~---~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~d 228 (423)
.+. ...++.++|+||+||++|+|++|..|+...... ............ ......++..+.+++.+||+.|
T Consensus 177 ~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 252 (267)
T cd06646 177 VAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPM----RALFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKN 252 (267)
T ss_pred HcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchh----hhheeeecCCCCCCCCccccccCHHHHHHHHHHhhCC
Confidence 874 344788999999999999999999887542111 101111111111 1112245678999999999999
Q ss_pred cCCCCCHHHHHHHH
Q 014484 229 ARERPNAKSLVISL 242 (423)
Q Consensus 229 p~~Rps~~~vl~~l 242 (423)
|++|||++++++++
T Consensus 253 P~~Rp~~~~il~~l 266 (267)
T cd06646 253 PKKRPTAERLLTHL 266 (267)
T ss_pred hhhCcCHHHHhcCC
Confidence 99999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-37 Score=298.11 Aligned_cols=236 Identities=13% Similarity=0.151 Sum_probs=184.4
Q ss_pred CCCCccceeeee--cceeeeeecCCCh---hhHHHHHHHHHHHhcCCCCCccceEeEEEeCC------ceeEEEecCCCC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEAD------ERLLVAEFMPNE 70 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------~~~lv~e~~~~~ 70 (423)
|+||.||.+.+. +..+++|.+.... .....+.+|+.+++.++||||+++++++...+ ..|+||||+.+
T Consensus 35 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~~~lv~e~~~~- 113 (364)
T cd07875 35 GAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA- 113 (364)
T ss_pred CCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccCeEEEEEeCCCC-
Confidence 899999999874 6678888775432 33457789999999999999999999886543 46999999976
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC---CccccC
Q 014484 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTN 147 (423)
Q Consensus 71 ~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~~t 147 (423)
+|.+.+. ..+++..+..++.|++.||.|||+++ |+||||||+||+++.++.++|+|||+++..... ....+|
T Consensus 114 ~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~t 188 (364)
T cd07875 114 NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVT 188 (364)
T ss_pred CHHHHHH----hcCCHHHHHHHHHHHHHHHHHHhhCC-eecCCCCHHHEEECCCCcEEEEeCCCccccCCCCcccCCccc
Confidence 7877773 35889999999999999999999999 999999999999999999999999999866543 334678
Q ss_pred cccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhh------------------hcc--ccc--
Q 014484 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLL------------------LMD--SAL-- 205 (423)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~------------------~~~--~~~-- 205 (423)
..|+|||++.+..++.++|||||||++|+|++|..||............... ... +..
T Consensus 189 ~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (364)
T cd07875 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAG 268 (364)
T ss_pred CCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCC
Confidence 9999999999889999999999999999999999988653211110000000 000 000
Q ss_pred --------------cCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 206 --------------EGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 206 --------------~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
........+.++.++|.+||+.||.+|||+.++++|.+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~ 320 (364)
T cd07875 269 YSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 320 (364)
T ss_pred CChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCcc
Confidence 00001112457899999999999999999999998854
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-37 Score=287.03 Aligned_cols=240 Identities=16% Similarity=0.222 Sum_probs=192.8
Q ss_pred CCCCccceeeeec------ceeeeeecCCC--hhhHHHHHHHHHHHhcCCCCCccceEeEEEe-CCceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICWFH------CHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYE-ADERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~~~------~~~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~~~~~~L 72 (423)
|+||.||++.+.. ..+++|.+... ......+.+|+.+++.++||||+++++++.. +...++++||+++++|
T Consensus 17 g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~~~~~~~L 96 (280)
T cd05043 17 GTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPFVLYPYMNWGNL 96 (280)
T ss_pred cCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCEEEEEcCCCCcH
Confidence 8999999999854 55666665433 3346678899999999999999999998876 4568899999999999
Q ss_pred HhhhccCCC------CCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC----
Q 014484 73 AKHLFHWET------QPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK---- 142 (423)
Q Consensus 73 ~~~i~~~~~------~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 142 (423)
.+++..... ..+++.+++.++.|++.||.|||+++ ++|+||||+||++++++.++|+|||+++......
T Consensus 97 ~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-i~H~di~p~nil~~~~~~~kl~d~g~~~~~~~~~~~~~ 175 (280)
T cd05043 97 KLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG-VIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCL 175 (280)
T ss_pred HHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccCHhhEEEcCCCcEEECCCCCcccccCCceEEe
Confidence 999854221 46899999999999999999999999 9999999999999999999999999998654322
Q ss_pred --ccccCcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHH
Q 014484 143 --SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVR 219 (423)
Q Consensus 143 --~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 219 (423)
...++..|+|||.+.+..++.++|||||||++|++++ |..||....... .............+..+++++.+
T Consensus 176 ~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 250 (280)
T cd05043 176 GDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFE-----MAAYLKDGYRLAQPINCPDELFA 250 (280)
T ss_pred CCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHH-----HHHHHHcCCCCCCCCcCCHHHHH
Confidence 2335678999999988889999999999999999999 887776432111 11111111122223445778999
Q ss_pred HHHHhcccCcCCCCCHHHHHHHHHhhhh
Q 014484 220 LASRCLQSEARERPNAKSLVISLMSLQK 247 (423)
Q Consensus 220 li~~cl~~dp~~Rps~~~vl~~l~~~~~ 247 (423)
++.+||..||++|||+.++++.|..+.+
T Consensus 251 li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 251 VMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred HHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 9999999999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-37 Score=289.75 Aligned_cols=240 Identities=18% Similarity=0.243 Sum_probs=187.9
Q ss_pred CCCCccceeeeec------------------ceeeeeecCCC--hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCcee
Q 014484 2 GGRCSKFSICWFH------------------CHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERL 61 (423)
Q Consensus 2 G~~g~v~~~~~~~------------------~~~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 61 (423)
|+||.||.+.+.. ..+++|.+... ....+.+.+|++++.+++||||+++++++..++..+
T Consensus 16 G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 95 (296)
T cd05051 16 GQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLLGVCTVDPPLC 95 (296)
T ss_pred CCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEEEEEEecCCCcE
Confidence 8999999987642 23566665543 344678889999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCC---------CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccc
Q 014484 62 LVAEFMPNETLAKHLFHWE---------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSF 132 (423)
Q Consensus 62 lv~e~~~~~~L~~~i~~~~---------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Df 132 (423)
+||||+.+++|.+++.+.. ...+++..++.++.|++.||.|||+++ ++||||||+||+++.++.++|+||
T Consensus 96 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~-i~H~dlkp~Nili~~~~~~~l~df 174 (296)
T cd05051 96 MIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN-FVHRDLATRNCLVGKNYTIKIADF 174 (296)
T ss_pred EEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC-ccccccchhceeecCCCceEEccc
Confidence 9999999999999986432 126899999999999999999999999 999999999999999999999999
Q ss_pred cccccCCCC------CccccCcccCCccccccCCCCCCcceehhHHHHHHHhh--CCCCCCchhhHHhhhchhhhhc---
Q 014484 133 GLMKNSRDG------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS--GKHIPPSHALDLIRSKNFLLLM--- 201 (423)
Q Consensus 133 g~~~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~--g~~~~~~~~~~~~~~~~~~~~~--- 201 (423)
|+++..... ....+++.|+|||.+.+..++.++|||||||++|+|++ +..|+......... .......
T Consensus 175 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~-~~~~~~~~~~ 253 (296)
T cd05051 175 GMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVI-ENAGHFFRDD 253 (296)
T ss_pred cceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHH-HHHHhccccc
Confidence 998765432 22345678999999988889999999999999999998 44444332111110 0011110
Q ss_pred cccccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 202 DSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 202 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
........+..++.++.+++.+||+.||.+|||+.++++.|.
T Consensus 254 ~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 254 GRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred cccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 111111223345688999999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=288.01 Aligned_cols=233 Identities=15% Similarity=0.240 Sum_probs=192.5
Q ss_pred CCCCccceeeee--cceeeeeecCCC--hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~ 77 (423)
|+||.||++.+. +..+++|.+... ......+.+|+++++.++||||+++++++..++..++||||+++++|.+++.
T Consensus 15 g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~ 94 (277)
T cd06642 15 GSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLGGGSALDLLK 94 (277)
T ss_pred CCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccCCCcHHHHhh
Confidence 889999999874 556777776533 2345678899999999999999999999999999999999999999999884
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC----ccccCcccCCc
Q 014484 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK----SYSTNLAFTPP 153 (423)
Q Consensus 78 ~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~----~~~~t~~y~aP 153 (423)
.+.+++..+..++.|++.|+.|||+++ ++|+||+|+||+++.++.++|+|||++....... ...++..|+||
T Consensus 95 ---~~~~~~~~~~~~~~~i~~~l~~lH~~~-ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aP 170 (277)
T cd06642 95 ---PGPLEETYIATILREILKGLDYLHSER-KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAP 170 (277)
T ss_pred ---cCCCCHHHHHHHHHHHHHHHHHHhcCC-eeccCCChheEEEeCCCCEEEccccccccccCcchhhhcccCcccccCH
Confidence 356899999999999999999999999 9999999999999999999999999987654332 23578889999
Q ss_pred cccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCC
Q 014484 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERP 233 (423)
Q Consensus 154 E~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 233 (423)
|.+.+..++.++|+|||||++++|++|..|+...... ..............+...+.++.+++.+||+.+|++||
T Consensus 171 E~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 245 (277)
T cd06642 171 EVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPM-----RVLFLIPKNSPPTLEGQYSKPFKEFVEACLNKDPRFRP 245 (277)
T ss_pred HHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchh-----hHHhhhhcCCCCCCCcccCHHHHHHHHHHccCCcccCc
Confidence 9999888999999999999999999999886542111 11111122222233445677899999999999999999
Q ss_pred CHHHHHHHHH
Q 014484 234 NAKSLVISLM 243 (423)
Q Consensus 234 s~~~vl~~l~ 243 (423)
|+.+++.|..
T Consensus 246 ~~~~il~~~~ 255 (277)
T cd06642 246 TAKELLKHKF 255 (277)
T ss_pred CHHHHHHhHH
Confidence 9999999854
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=288.35 Aligned_cols=235 Identities=18% Similarity=0.247 Sum_probs=188.1
Q ss_pred CCCCccceeeee--cceeeeeecCCC--hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~ 77 (423)
|+||.||++.+. +..+++|++... ......+.+|++++.+++||||+++++++..++..++||||+++++|..+.
T Consensus 12 g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~- 90 (279)
T cd06619 12 GNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFMDGGSLDVYR- 90 (279)
T ss_pred CCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecCCCCChHHhh-
Confidence 889999999874 566777766443 234567889999999999999999999999999999999999999997653
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC--CccccCcccCCccc
Q 014484 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTNLAFTPPEY 155 (423)
Q Consensus 78 ~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--~~~~~t~~y~aPE~ 155 (423)
.+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++...... ....++..|+|||.
T Consensus 91 -----~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~ 164 (279)
T cd06619 91 -----KIPEHVLGRIAVAVVKGLTYLWSLK-ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYVGTNAYMAPER 164 (279)
T ss_pred -----cCCHHHHHHHHHHHHHHHHHHHHCC-EeeCCCCHHHEEECCCCCEEEeeCCcceecccccccCCCCChhhcCcee
Confidence 4789999999999999999999999 999999999999999999999999998765433 34568899999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHh--hhchhhhh-ccccccCCCChhHHHHHHHHHHHhcccCcCCC
Q 014484 156 MRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLI--RSKNFLLL-MDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (423)
Q Consensus 156 ~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (423)
+.+..++.++|+|||||++|+|++|..||........ ........ .............++++.+++.+||+.||++|
T Consensus 165 ~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R 244 (279)
T cd06619 165 ISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQPKER 244 (279)
T ss_pred ecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHHHHHhhCChhhC
Confidence 9988899999999999999999999988754211000 00011111 11111111122356789999999999999999
Q ss_pred CCHHHHHHHHH
Q 014484 233 PNAKSLVISLM 243 (423)
Q Consensus 233 ps~~~vl~~l~ 243 (423)
|++++++.+..
T Consensus 245 p~~~eil~~~~ 255 (279)
T cd06619 245 PAPENLMDHPF 255 (279)
T ss_pred CCHHHHhcCcc
Confidence 99999998754
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-37 Score=285.40 Aligned_cols=239 Identities=19% Similarity=0.239 Sum_probs=191.9
Q ss_pred CCCCccceeeeecc-----eeeeeecCCC--hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWFHC-----HLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~~~-----~~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||.+.+... .+++|..... ....+.+.+|+.+++.++||||+++++++.. ...++||||+++++|.+
T Consensus 17 g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~ 95 (270)
T cd05056 17 GQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIVMELAPLGELRS 95 (270)
T ss_pred ccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEEEEcCCCCcHHH
Confidence 89999999987532 4666665443 3345688999999999999999999999875 45789999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCCc-----cccCcc
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS-----YSTNLA 149 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-----~~~t~~ 149 (423)
++.. ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||+++....... ..++..
T Consensus 96 ~l~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~~-~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~ 173 (270)
T cd05056 96 YLQV-NKYSLDLASLILYSYQLSTALAYLESKR-FVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYKASKGKLPIK 173 (270)
T ss_pred HHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccccChheEEEecCCCeEEccCceeeecccccceecCCCCcccc
Confidence 9964 2346899999999999999999999999 99999999999999999999999999876543321 223467
Q ss_pred cCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccC
Q 014484 150 FTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSE 228 (423)
Q Consensus 150 y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 228 (423)
|+|||.+.+..++.++||||||+++++|++ |..||........ . ..+........+..++.++.+++.+||..+
T Consensus 174 y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 248 (270)
T cd05056 174 WMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDV----I-GRIENGERLPMPPNCPPTLYSLMTKCWAYD 248 (270)
T ss_pred ccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHH----H-HHHHcCCcCCCCCCCCHHHHHHHHHHcCCC
Confidence 999999988889999999999999999986 8888765422111 1 111111122334566788999999999999
Q ss_pred cCCCCCHHHHHHHHHhhhhh
Q 014484 229 ARERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 229 p~~Rps~~~vl~~l~~~~~~ 248 (423)
|.+|||+.+++..|..+...
T Consensus 249 P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 249 PSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred hhhCcCHHHHHHHHHHHHhc
Confidence 99999999999999887643
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-37 Score=286.94 Aligned_cols=234 Identities=15% Similarity=0.230 Sum_probs=195.0
Q ss_pred CCCCccceeeee--cceeeeeecCCC--hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~ 77 (423)
|+||.||.+.+. +..+++|++... ......+.+|+.+++.++||||+++++++.++...++||||++|++|.+++.
T Consensus 15 g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~ 94 (277)
T cd06640 15 GSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYLGGGSALDLLR 94 (277)
T ss_pred CCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecCCCCcHHHHHh
Confidence 899999999874 566777776543 3445678899999999999999999999999999999999999999999984
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC----ccccCcccCCc
Q 014484 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK----SYSTNLAFTPP 153 (423)
Q Consensus 78 ~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~----~~~~t~~y~aP 153 (423)
.+.+++.++..++.|++.||.|||+++ ++|+||+|+||+++.++.++|+|||++....... ...++..|+||
T Consensus 95 ---~~~l~~~~~~~~~~~l~~~l~~lh~~~-ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~ap 170 (277)
T cd06640 95 ---AGPFDEFQIATMLKEILKGLDYLHSEK-KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAP 170 (277)
T ss_pred ---cCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCcCCChhhEEEcCCCCEEEcccccceeccCCccccccccCcccccCH
Confidence 346899999999999999999999999 9999999999999999999999999987654322 23567889999
Q ss_pred cccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCC
Q 014484 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERP 233 (423)
Q Consensus 154 E~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 233 (423)
|.+.+..++.++|+|||||++|+|++|..|+...... ..............+..++.++.+++.+||+.+|++||
T Consensus 171 E~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 245 (277)
T cd06640 171 EVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPM-----RVLFLIPKNNPPTLTGEFSKPFKEFIDACLNKDPSFRP 245 (277)
T ss_pred hHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChH-----hHhhhhhcCCCCCCchhhhHHHHHHHHHHcccCcccCc
Confidence 9998888999999999999999999999887643211 11111222223344556788999999999999999999
Q ss_pred CHHHHHHHHHh
Q 014484 234 NAKSLVISLMS 244 (423)
Q Consensus 234 s~~~vl~~l~~ 244 (423)
++.+++.+..-
T Consensus 246 ~~~~il~~~~~ 256 (277)
T cd06640 246 TAKELLKHKFI 256 (277)
T ss_pred CHHHHHhChHh
Confidence 99999988554
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-38 Score=295.52 Aligned_cols=240 Identities=15% Similarity=0.118 Sum_probs=186.1
Q ss_pred CCCccceeeee--cceeeeeecCCCh---hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhc
Q 014484 3 GRCSKFSICWF--HCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (423)
Q Consensus 3 ~~g~v~~~~~~--~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~ 77 (423)
+||.||.+... +..+++|.+.... .....+.+|+.+++.++||||++++++|..++..++||||+++++|.+++.
T Consensus 12 ~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~ 91 (327)
T cd08227 12 DLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLIC 91 (327)
T ss_pred ceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccCCCcHHHHHH
Confidence 67889998874 6778888876542 234567789999999999999999999999999999999999999999996
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-----------Ccccc
Q 014484 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----------KSYST 146 (423)
Q Consensus 78 ~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-----------~~~~~ 146 (423)
......+++..+..++.|++.||.|||+++ |+||||||+||+++.++.++++||+........ ....+
T Consensus 92 ~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (327)
T cd08227 92 THFMDGMSELAIAYILQGVLKALDYIHHMG-YVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVK 170 (327)
T ss_pred hhccCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCChhhEEEecCCcEEEcccchhhccccccccccccccccccccc
Confidence 544456899999999999999999999999 999999999999999999999999865432211 12245
Q ss_pred CcccCCcccccc--CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhcc----------------------
Q 014484 147 NLAFTPPEYMRT--GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD---------------------- 202 (423)
Q Consensus 147 t~~y~aPE~~~~--~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~---------------------- 202 (423)
+..|+|||++.+ ..++.++|||||||++|+|++|..||................+.
T Consensus 171 ~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (327)
T cd08227 171 VLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGA 250 (327)
T ss_pred eecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhhhcccCCcccCC
Confidence 677999999875 45899999999999999999999988643211110000000000
Q ss_pred ------------------ccccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 203 ------------------SALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 203 ------------------~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
..........+++++.+++.+||+.||++|||++++++|..
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~ 309 (327)
T cd08227 251 NSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSF 309 (327)
T ss_pred cCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChh
Confidence 00000112234678999999999999999999999998754
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-38 Score=291.18 Aligned_cols=235 Identities=17% Similarity=0.243 Sum_probs=192.1
Q ss_pred CCCCccceeeee--cceeeeeecCCCh-hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
|+||.||.+.+. +..++++.+.... .....+.+|+.+++.++|+||+++++.+..+...++||||++|++|.+++.
T Consensus 31 g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~- 109 (296)
T cd06654 31 GASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT- 109 (296)
T ss_pred CCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecccCCCCHHHHHH-
Confidence 889999999864 5667777665433 235678899999999999999999999999999999999999999999984
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccCCcc
Q 014484 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPPE 154 (423)
Q Consensus 79 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~aPE 154 (423)
...+++.++..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++...... ....+++.|+|||
T Consensus 110 --~~~~~~~~~~~i~~ql~~aL~~LH~~g-i~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE 186 (296)
T cd06654 110 --ETCMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPE 186 (296)
T ss_pred --hcCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEcCCCCEEECccccchhccccccccCcccCCccccCHH
Confidence 345899999999999999999999999 999999999999999999999999998765432 2346788999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCC
Q 014484 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (423)
Q Consensus 155 ~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (423)
.+.+..++.++|||||||++|+|++|..||......... .............+...+..+.+++.+||..||++|||
T Consensus 187 ~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt 263 (296)
T cd06654 187 VVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL---YLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGS 263 (296)
T ss_pred HHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhH---HHHhcCCCCCCCCccccCHHHHHHHHHHCcCCcccCcC
Confidence 998888999999999999999999999988654211110 11111111111234456778999999999999999999
Q ss_pred HHHHHHHHH
Q 014484 235 AKSLVISLM 243 (423)
Q Consensus 235 ~~~vl~~l~ 243 (423)
+.+++.+-.
T Consensus 264 ~~eil~~~~ 272 (296)
T cd06654 264 AKELLQHQF 272 (296)
T ss_pred HHHHhhChh
Confidence 999998643
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-38 Score=299.07 Aligned_cols=236 Identities=13% Similarity=0.142 Sum_probs=184.2
Q ss_pred CCCCccceeeee--cceeeeeecCCC---hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCC------ceeEEEecCCCC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEAD------ERLLVAEFMPNE 70 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------~~~lv~e~~~~~ 70 (423)
|+||.||.+.+. +..+++|.+... ......+.+|+.+++.++||||+++++++.... ..|+||||+.+
T Consensus 32 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~- 110 (359)
T cd07876 32 GAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDA- 110 (359)
T ss_pred CCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccceeEEEEeCCCc-
Confidence 899999999874 677888877543 234567789999999999999999999987554 46999999976
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC---CccccC
Q 014484 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTN 147 (423)
Q Consensus 71 ~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~~t 147 (423)
+|.+.+. ..+++..+..++.|++.||.|||+++ |+||||||+||+++.++.++|+|||+++..... ....+|
T Consensus 111 ~l~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~-ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t 185 (359)
T cd07876 111 NLCQVIH----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVT 185 (359)
T ss_pred CHHHHHh----ccCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEECCCCCEEEecCCCccccccCccCCCCccc
Confidence 6766662 35889999999999999999999999 999999999999999999999999998764432 334678
Q ss_pred cccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhc------------------hhhhhcc--cccc-
Q 014484 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSK------------------NFLLLMD--SALE- 206 (423)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~------------------~~~~~~~--~~~~- 206 (423)
+.|+|||++.+..++.++|||||||++|+|++|..||........... ....... +...
T Consensus 186 ~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (359)
T cd07876 186 RYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPG 265 (359)
T ss_pred CCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCC
Confidence 999999999988999999999999999999999998864321100000 0000000 0000
Q ss_pred ---------------CCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 207 ---------------GHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 207 ---------------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
.......++++.++|.+||+.||++|||+.+++.|.+
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~ 317 (359)
T cd07876 266 ISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPY 317 (359)
T ss_pred cchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCch
Confidence 0011123567899999999999999999999998854
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-37 Score=288.13 Aligned_cols=243 Identities=20% Similarity=0.282 Sum_probs=189.0
Q ss_pred CCCCCccceeeee------cceeeeeecCCCh-hhHHHHHHHHHHHhcCCCCCccceEeEEEeC--CceeEEEecCCCCC
Q 014484 1 MGGRCSKFSICWF------HCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEA--DERLLVAEFMPNET 71 (423)
Q Consensus 1 ~G~~g~v~~~~~~------~~~~~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e~~~~~~ 71 (423)
-|+||.||.+.+. +..+++|.+.... .....+.+|++++..++||||+++++++... ...++||||+++++
T Consensus 14 ~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~ 93 (284)
T cd05081 14 KGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPYGS 93 (284)
T ss_pred CCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEEEEEecCCCC
Confidence 3899999998752 5567777765543 3356788999999999999999999987543 45789999999999
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCCc-------c
Q 014484 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS-------Y 144 (423)
Q Consensus 72 L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-------~ 144 (423)
|.+++.+ ....+++..+..++.|++.||.|||+++ ++||||||+||+++.++.++|+|||+++....... .
T Consensus 94 L~~~l~~-~~~~l~~~~~~~~~~~l~~aL~~LH~~~-i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 171 (284)
T cd05081 94 LRDYLQK-HRERLDHRKLLLYASQICKGMEYLGSKR-YVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPG 171 (284)
T ss_pred HHHHHHh-cCcCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCCHhhEEECCCCeEEECCCcccccccCCCcceeecCCC
Confidence 9999854 2346899999999999999999999999 99999999999999999999999999886543321 1
Q ss_pred ccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhh---h--------chhhhhccccccCCCChhH
Q 014484 145 STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIR---S--------KNFLLLMDSALEGHFSNDE 213 (423)
Q Consensus 145 ~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~---~--------~~~~~~~~~~~~~~~~~~~ 213 (423)
.++..|+|||.+.+..++.++|||||||+++||++|..++......... . ...............+..+
T Consensus 172 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (284)
T cd05081 172 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGC 251 (284)
T ss_pred CCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcCCcCCCCCCC
Confidence 2345699999998888999999999999999999987654332111000 0 0001111111122233456
Q ss_pred HHHHHHHHHHhcccCcCCCCCHHHHHHHHHhh
Q 014484 214 GTELVRLASRCLQSEARERPNAKSLVISLMSL 245 (423)
Q Consensus 214 ~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~ 245 (423)
+.++.+++.+||..+|++|||+.+++..|+.+
T Consensus 252 ~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 252 PAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred CHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 78899999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-37 Score=283.92 Aligned_cols=241 Identities=15% Similarity=0.211 Sum_probs=195.7
Q ss_pred CCCCccceeeee--cceeeeeecCC----ChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLES----SDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||++.+. +..+++|.+.. .......+.+|++++++++|+||+++++++..++..++||||+++++|.++
T Consensus 13 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 92 (267)
T cd08224 13 GQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVLELADAGDLSRM 92 (267)
T ss_pred CCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEecCCCCCHHHH
Confidence 899999999985 66677776542 222356788999999999999999999999999999999999999999998
Q ss_pred hccC--CCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcc
Q 014484 76 LFHW--ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLA 149 (423)
Q Consensus 76 i~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~ 149 (423)
+.+. .+..+++..+..++.+++.||.|||+.+ ++||||+|+||+++.++.++|+|||++...... ....++..
T Consensus 93 l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~ 171 (267)
T cd08224 93 IKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR-IMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPY 171 (267)
T ss_pred HHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC-EecCCcChhhEEECCCCcEEEeccceeeeccCCCcccceecCCcc
Confidence 8532 3456899999999999999999999999 999999999999999999999999998755432 23457889
Q ss_pred cCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCCh-hHHHHHHHHHHHhcccC
Q 014484 150 FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSN-DEGTELVRLASRCLQSE 228 (423)
Q Consensus 150 y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~li~~cl~~d 228 (423)
|+|||.+.+..++.++|+|||||++|+|++|..|+........ ..............+. ..+.++.++|.+||..+
T Consensus 172 y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~ 248 (267)
T cd08224 172 YMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY---SLCKKIEKCDYPPLPADHYSEELRDLVSRCINPD 248 (267)
T ss_pred ccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHH---HHHhhhhcCCCCCCChhhcCHHHHHHHHHHcCCC
Confidence 9999999888899999999999999999999988754321111 1111111111222232 56678999999999999
Q ss_pred cCCCCCHHHHHHHHHhhh
Q 014484 229 ARERPNAKSLVISLMSLQ 246 (423)
Q Consensus 229 p~~Rps~~~vl~~l~~~~ 246 (423)
|++|||+.++++.+..+.
T Consensus 249 p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 249 PEKRPDISYVLQVAKEMH 266 (267)
T ss_pred cccCCCHHHHHHHHHHhc
Confidence 999999999999988653
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-37 Score=286.45 Aligned_cols=232 Identities=18% Similarity=0.294 Sum_probs=190.7
Q ss_pred CCCCccceeeee--cceeeeeecCCChh----------hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDL----------GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPN 69 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~----------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 69 (423)
|++|.||.+.+. +..+++|.+..... ..+.+.+|+.++++++||||+++++++...+..++||||+++
T Consensus 11 g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 90 (267)
T cd06628 11 GSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHLNIFLEYVPG 90 (267)
T ss_pred CCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCccEEEEEecCC
Confidence 889999999874 56677776643221 125678999999999999999999999999999999999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC--------
Q 014484 70 ETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-------- 141 (423)
Q Consensus 70 ~~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-------- 141 (423)
++|.+++.. .+.+++..+..++.|++.||.|||+++ ++||||+|+||++++++.++|+|||+++.....
T Consensus 91 ~~L~~~l~~--~~~l~~~~~~~~~~~l~~~l~~lH~~~-ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 167 (267)
T cd06628 91 GSVAALLNN--YGAFEETLVRNFVRQILKGLNYLHNRG-IIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNG 167 (267)
T ss_pred CCHHHHHHh--ccCccHHHHHHHHHHHHHHHHHHHhcC-cccccCCHHHEEEcCCCCEEecccCCCcccccccccCCccc
Confidence 999999954 456899999999999999999999999 999999999999999999999999998765421
Q ss_pred --CccccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHH
Q 014484 142 --KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVR 219 (423)
Q Consensus 142 --~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 219 (423)
....++..|+|||.+.+..++.++|+|||||++|+|++|..||...... ....... .......+...+..+.+
T Consensus 168 ~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~ 242 (267)
T cd06628 168 ARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQL----QAIFKIG-ENASPEIPSNISSEAID 242 (267)
T ss_pred cccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHH----HHHHHHh-ccCCCcCCcccCHHHHH
Confidence 1234678899999998888999999999999999999999888653111 1111111 12233445567788999
Q ss_pred HHHHhcccCcCCCCCHHHHHHH
Q 014484 220 LASRCLQSEARERPNAKSLVIS 241 (423)
Q Consensus 220 li~~cl~~dp~~Rps~~~vl~~ 241 (423)
++.+||+.||.+||++.+++.+
T Consensus 243 li~~~l~~~p~~Rp~~~~il~~ 264 (267)
T cd06628 243 FLEKTFEIDHNKRPTAAELLKH 264 (267)
T ss_pred HHHHHccCCchhCcCHHHHhhC
Confidence 9999999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-38 Score=289.55 Aligned_cols=235 Identities=13% Similarity=0.177 Sum_probs=189.8
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHHhcC-CCCCccceEeEEEe------CCceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNL-RSERLANLIGCCYE------ADERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~------~~~~~lv~e~~~~~~L 72 (423)
|+||.||.+.+. +..+++|++.........+..|+.++..+ +|+||+++++++.. ....+++|||+.+++|
T Consensus 27 g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L 106 (282)
T cd06636 27 GTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSV 106 (282)
T ss_pred CCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEEEEEEeCCCCcH
Confidence 899999999884 56778887766665667788999999999 79999999999863 4567999999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCC----CCccccCc
Q 014484 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNL 148 (423)
Q Consensus 73 ~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~~t~ 148 (423)
.+++....+..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++..... .....++.
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~-ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~ 185 (282)
T cd06636 107 TDLVKNTKGNALKEDWIAYICREILRGLAHLHAHK-VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTP 185 (282)
T ss_pred HHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEeeCcchhhhhccccCCCcccccc
Confidence 99997545566899999999999999999999999 99999999999999999999999999875432 23356788
Q ss_pred ccCCccccc-----cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHH
Q 014484 149 AFTPPEYMR-----TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASR 223 (423)
Q Consensus 149 ~y~aPE~~~-----~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 223 (423)
.|+|||.+. +..++.++|+|||||++|+|++|..||..... ...................++.++.++|.+
T Consensus 186 ~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 261 (282)
T cd06636 186 YWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHP----MRALFLIPRNPPPKLKSKKWSKKFIDFIEG 261 (282)
T ss_pred cccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCH----HhhhhhHhhCCCCCCcccccCHHHHHHHHH
Confidence 999999875 34588899999999999999999988754311 111111111111112223467889999999
Q ss_pred hcccCcCCCCCHHHHHHH
Q 014484 224 CLQSEARERPNAKSLVIS 241 (423)
Q Consensus 224 cl~~dp~~Rps~~~vl~~ 241 (423)
||+.||.+|||+.+++.+
T Consensus 262 cl~~~p~~Rp~~~ell~~ 279 (282)
T cd06636 262 CLVKNYLSRPSTEQLLKH 279 (282)
T ss_pred HhCCChhhCcCHHHHhcC
Confidence 999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-37 Score=283.47 Aligned_cols=235 Identities=23% Similarity=0.343 Sum_probs=192.1
Q ss_pred CCCCccceeeeec------ceeeeeecCCChh--hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHH
Q 014484 2 GGRCSKFSICWFH------CHLKSSVLESSDL--GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLA 73 (423)
Q Consensus 2 G~~g~v~~~~~~~------~~~~~~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 73 (423)
|+||.||.+.+.. ..+++|.+..... ....+..|+.++..++|+||+++++++.+.+..+++|||+++++|.
T Consensus 10 g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e~~~~~~l~ 89 (258)
T smart00219 10 GAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEYMEGGDLL 89 (258)
T ss_pred CCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEeccCCCCHH
Confidence 8999999999864 6678887765543 4678899999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCCc-----cccCc
Q 014484 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS-----YSTNL 148 (423)
Q Consensus 74 ~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-----~~~t~ 148 (423)
+++.......+++..+..++.|++.||.+||+++ ++|+||||+||+++.++.++|+|||+++....... ..++.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~-~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~ 168 (258)
T smart00219 90 DYLRKNRPKELSLSDLLSFALQIARGMEYLESKN-FIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKKKGGKLPI 168 (258)
T ss_pred HHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCC-eeecccccceEEEccCCeEEEcccCCceecccccccccccCCCcc
Confidence 9996433323899999999999999999999999 99999999999999999999999999876654311 22568
Q ss_pred ccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhccc
Q 014484 149 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQS 227 (423)
Q Consensus 149 ~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 227 (423)
.|+|||.+.+..++.++|+|||||++++|++ |.+|+...... ..............+...+.++.+++.+||..
T Consensus 169 ~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 243 (258)
T smart00219 169 RWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNE-----EVLEYLKKGYRLPKPENCPPEIYKLMLQCWAE 243 (258)
T ss_pred cccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHhcCCCCCCCCcCCHHHHHHHHHHCcC
Confidence 8999999988889999999999999999998 66665432111 11111111222233444678899999999999
Q ss_pred CcCCCCCHHHHHHHH
Q 014484 228 EARERPNAKSLVISL 242 (423)
Q Consensus 228 dp~~Rps~~~vl~~l 242 (423)
||++|||+.++++.|
T Consensus 244 ~p~~Rpt~~~ll~~l 258 (258)
T smart00219 244 DPEDRPTFSELVEIL 258 (258)
T ss_pred ChhhCcCHHHHHhhC
Confidence 999999999998753
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-37 Score=282.96 Aligned_cols=239 Identities=15% Similarity=0.139 Sum_probs=178.8
Q ss_pred CCCCccceeeeec-c---eeeeeecCCC--hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWFH-C---HLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~~-~---~~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||++.+.. . .++++.+... ......+.+|+.++..++||||++++++|......++||||+++|+|.++
T Consensus 6 G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 85 (268)
T cd05086 6 GWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGDLKSY 85 (268)
T ss_pred CcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCcHHHH
Confidence 8999999987542 1 2233333322 23456899999999999999999999999999999999999999999999
Q ss_pred hccCC--CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCC------CCCccccC
Q 014484 76 LFHWE--TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSR------DGKSYSTN 147 (423)
Q Consensus 76 i~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~------~~~~~~~t 147 (423)
+.+.. ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++.++|+|||++.... ......++
T Consensus 86 l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~-i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~ 164 (268)
T cd05086 86 LSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN-FLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDDKCVP 164 (268)
T ss_pred HHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC-eeccCCccceEEEcCCccEEecccccccccCcchhhhcccCCcCc
Confidence 86422 234677788899999999999999999 9999999999999999999999999876422 12334578
Q ss_pred cccCCcccccc-------CCCCCCcceehhHHHHHHHhhCC-CCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHH
Q 014484 148 LAFTPPEYMRT-------GRVTPESVVYSFGTMLLDLLSGK-HIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVR 219 (423)
Q Consensus 148 ~~y~aPE~~~~-------~~~~~~~Di~slG~~l~el~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 219 (423)
..|+|||++.. ..++.++|||||||++|||+++. .|+......................+..+...++.+.+
T Consensus 165 ~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (268)
T cd05086 165 LRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSERWYE 244 (268)
T ss_pred ccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCcHHHHH
Confidence 89999998753 23578999999999999999754 45433211111111011111111222333446778999
Q ss_pred HHHHhcccCcCCCCCHHHHHHHH
Q 014484 220 LASRCLQSEARERPNAKSLVISL 242 (423)
Q Consensus 220 li~~cl~~dp~~Rps~~~vl~~l 242 (423)
++..|| .+|++||+++++++.|
T Consensus 245 l~~~c~-~~P~~Rp~~~~i~~~l 266 (268)
T cd05086 245 VLQFCW-LSPEKRATAEEVHRLL 266 (268)
T ss_pred HHHHHh-hCcccCCCHHHHHHHh
Confidence 999999 6899999999998876
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=288.18 Aligned_cols=242 Identities=21% Similarity=0.293 Sum_probs=194.7
Q ss_pred CCCCccceeeee------cceeeeeecCCChh--hHHHHHHHHHHHhcCCCCCccceEeEEEe--CCceeEEEecCCCCC
Q 014484 2 GGRCSKFSICWF------HCHLKSSVLESSDL--GETLNLEEAKAVGNLRSERLANLIGCCYE--ADERLLVAEFMPNET 71 (423)
Q Consensus 2 G~~g~v~~~~~~------~~~~~~~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~~~~~ 71 (423)
|+||.||.+.+. +..+++|++..... ....+.+|+++++.++|+||+++++++.. +...++||||+++++
T Consensus 15 g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~ 94 (284)
T cd05038 15 GHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRLIMEYLPSGS 94 (284)
T ss_pred CCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceEEEEecCCCCC
Confidence 899999999874 45678888766555 36789999999999999999999999987 557899999999999
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC-------cc
Q 014484 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-------SY 144 (423)
Q Consensus 72 L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-------~~ 144 (423)
|.+++... ...+++..+..++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||++....... ..
T Consensus 95 l~~~l~~~-~~~~~~~~~~~~~~~l~~aL~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 172 (284)
T cd05038 95 LRDYLQRH-RDQINLKRLLLFSSQICKGMDYLGSQR-YIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPG 172 (284)
T ss_pred HHHHHHhC-ccccCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHhEEEcCCCCEEEcccccccccccCCcceeccCCC
Confidence 99999642 335999999999999999999999999 9999999999999999999999999988765321 12
Q ss_pred ccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhh----------hchhhhhccccccCCCChhHH
Q 014484 145 STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIR----------SKNFLLLMDSALEGHFSNDEG 214 (423)
Q Consensus 145 ~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~ 214 (423)
.++..|++||.+.+..++.++|||||||++++|++|..|+......... .......+........+..++
T Consensus 173 ~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (284)
T cd05038 173 ESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPRPPSCP 252 (284)
T ss_pred CCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcCCcCCCCccCC
Confidence 3356799999998888999999999999999999999876543211100 111111222222223344556
Q ss_pred HHHHHHHHHhcccCcCCCCCHHHHHHHHHhh
Q 014484 215 TELVRLASRCLQSEARERPNAKSLVISLMSL 245 (423)
Q Consensus 215 ~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~ 245 (423)
.++.+++.+||+.+|++|||+.+++..|..+
T Consensus 253 ~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 253 DEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred HHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 7899999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-37 Score=287.89 Aligned_cols=239 Identities=18% Similarity=0.219 Sum_probs=188.8
Q ss_pred CCCCccceeeee-------cceeeeeecCCCh--hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICWF-------HCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~~-------~~~~~~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 72 (423)
|+||.||.+.+. +..+++|.+.... .....+.+|+.+++.++||||+++++++..++..++||||+++|+|
T Consensus 17 G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 96 (288)
T cd05061 17 GSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDL 96 (288)
T ss_pred CCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEeCCCCCCH
Confidence 899999998653 2356777665433 2344678999999999999999999999999999999999999999
Q ss_pred HhhhccCC--------CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC---
Q 014484 73 AKHLFHWE--------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--- 141 (423)
Q Consensus 73 ~~~i~~~~--------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--- 141 (423)
.+++.... ...++...+..++.|++.||.|||+++ ++||||||+||+++.++.++|+|||+++.....
T Consensus 97 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~H~dikp~nili~~~~~~~L~Dfg~~~~~~~~~~~ 175 (288)
T cd05061 97 KSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK-FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYY 175 (288)
T ss_pred HHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcCCCCChheEEEcCCCcEEECcCCccccccccccc
Confidence 99996421 133567788999999999999999999 999999999999999999999999998754322
Q ss_pred ---CccccCcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHH
Q 014484 142 ---KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTEL 217 (423)
Q Consensus 142 ---~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 217 (423)
....++..|+|||.+.+..++.++|+|||||++|||++ |..|+...... .....+........+...++.+
T Consensus 176 ~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 250 (288)
T cd05061 176 RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE-----QVLKFVMDGGYLDQPDNCPERV 250 (288)
T ss_pred cccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHcCCCCCCCCCCCHHH
Confidence 12234677999999998889999999999999999998 56666442211 1111111112223344557889
Q ss_pred HHHHHHhcccCcCCCCCHHHHHHHHHhhh
Q 014484 218 VRLASRCLQSEARERPNAKSLVISLMSLQ 246 (423)
Q Consensus 218 ~~li~~cl~~dp~~Rps~~~vl~~l~~~~ 246 (423)
.+++.+||+.||++|||+.++++.+....
T Consensus 251 ~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 251 TDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred HHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 99999999999999999999998887653
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-37 Score=286.20 Aligned_cols=236 Identities=16% Similarity=0.203 Sum_probs=189.8
Q ss_pred CCCCccceeeee--cceeeeeecCCC-hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS-DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
|+||.||++.+. +..++++.+... ......+.+|+++++.++||||+++++++..++..++||||+++++|..++.+
T Consensus 16 g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~ 95 (282)
T cd06643 16 GAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE 95 (282)
T ss_pred CCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCCCcHHHHHHh
Confidence 889999999885 455666666543 34466788999999999999999999999999999999999999999988753
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccCCcc
Q 014484 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPPE 154 (423)
Q Consensus 79 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~aPE 154 (423)
....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++...... ....++..|+|||
T Consensus 96 -~~~~l~~~~~~~~~~qi~~~L~~LH~~~-i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE 173 (282)
T cd06643 96 -LERPLTEPQIRVVCKQTLEALNYLHENK-IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPE 173 (282)
T ss_pred -cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCcccEEEccCCCEEEccccccccccccccccccccccccccCHh
Confidence 3457999999999999999999999999 999999999999999999999999998754322 2345788999999
Q ss_pred ccc-----cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccc-cccCCCChhHHHHHHHHHHHhcccC
Q 014484 155 YMR-----TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS-ALEGHFSNDEGTELVRLASRCLQSE 228 (423)
Q Consensus 155 ~~~-----~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~d 228 (423)
.+. +..++.++|+||+||++|+|++|.+||...... ......... ......+..++.++.++|.+||+.|
T Consensus 174 ~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 249 (282)
T cd06643 174 VVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPM----RVLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLEKN 249 (282)
T ss_pred hccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHH----HHHHHHhhcCCCCCCCccccCHHHHHHHHHHccCC
Confidence 874 345788999999999999999999887643211 111111111 1111233456788999999999999
Q ss_pred cCCCCCHHHHHHHHH
Q 014484 229 ARERPNAKSLVISLM 243 (423)
Q Consensus 229 p~~Rps~~~vl~~l~ 243 (423)
|.+|||+.+++++..
T Consensus 250 p~~Rp~~~~il~~~~ 264 (282)
T cd06643 250 VDARWTTTQLLQHPF 264 (282)
T ss_pred hhhCcCHHHHhcCCC
Confidence 999999999987754
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-38 Score=290.23 Aligned_cols=237 Identities=14% Similarity=0.130 Sum_probs=182.9
Q ss_pred CCCCccceeeee--cceeeeeecCCCh---hhHHHHHHHHHHHhcC---CCCCccceEeEEEeC-----CceeEEEecCC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD---LGETLNLEEAKAVGNL---RSERLANLIGCCYEA-----DERLLVAEFMP 68 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~-----~~~~lv~e~~~ 68 (423)
|+||.||++.+. +..+++|.+.... .....+.+|+.+++.+ +||||+++++++... ...++||||+.
T Consensus 11 g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~ 90 (288)
T cd07863 11 GAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKVTLVFEHVD 90 (288)
T ss_pred cCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceEEEEEcccc
Confidence 899999999885 5667777664322 1223456777777665 799999999998753 34789999997
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC---Cccc
Q 014484 69 NETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYS 145 (423)
Q Consensus 69 ~~~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~ 145 (423)
+ +|.+++.......+++..+..++.|++.||.|||+++ ++||||||+||+++.++.++|+|||+++..... ....
T Consensus 91 ~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 168 (288)
T cd07863 91 Q-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANC-IVHRDLKPENILVTSGGQVKLADFGLARIYSCQMALTPVV 168 (288)
T ss_pred c-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEECccCccccccCcccCCCcc
Confidence 5 8988886544556999999999999999999999999 999999999999999999999999998765533 2345
Q ss_pred cCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhcc---------------ccc-----
Q 014484 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD---------------SAL----- 205 (423)
Q Consensus 146 ~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~---------------~~~----- 205 (423)
+|..|+|||++.+..++.++||||+||++|+|++|.+||........... ...... ...
T Consensus 169 ~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (288)
T cd07863 169 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGK-IFDLIGLPPEDDWPRDVTLPRGAFSPRGP 247 (288)
T ss_pred ccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHH-HHHHhCCCChhhCcccccccccccCCCCC
Confidence 78899999999888899999999999999999999988755422111100 000000 000
Q ss_pred --cCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014484 206 --EGHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (423)
Q Consensus 206 --~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~ 241 (423)
.....+.++.++.+++.+||+.||++|||+.+++.|
T Consensus 248 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h 285 (288)
T cd07863 248 RPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH 285 (288)
T ss_pred CchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 001112356778999999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-37 Score=289.55 Aligned_cols=240 Identities=16% Similarity=0.242 Sum_probs=189.7
Q ss_pred CCCCccceeeee--cceeeeeecCCC--hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~ 77 (423)
|+||.||.+.+. +..++++.+... ......+.+|++++++++||||+++++++..++..++||||++|++|.+++.
T Consensus 12 G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~~~~~L~~~l~ 91 (308)
T cd06615 12 GNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK 91 (308)
T ss_pred CCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeeccCCCcHHHHHH
Confidence 899999999875 455666665432 2334568899999999999999999999999999999999999999999996
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHc-CCCeeeccCCCCCeeecCCCCeEEccccccccCCCC--CccccCcccCCcc
Q 014484 78 HWETQPMKWAMRLRVALYLAQALEYCSS-KGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTNLAFTPPE 154 (423)
Q Consensus 78 ~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--~~~~~t~~y~aPE 154 (423)
. .+.+++..+..++.|++.||.|||+ .+ ++|+||||+||+++.++.++|+|||++...... ....++..|+|||
T Consensus 92 ~--~~~~~~~~~~~~~~~i~~~l~~lH~~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~aPE 168 (308)
T cd06615 92 K--AGRIPENILGKISIAVLRGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPE 168 (308)
T ss_pred h--cCCCCHHHHHHHHHHHHHHHHHHHhhCC-EEECCCChHHEEEecCCcEEEccCCCcccccccccccCCCCcCccChh
Confidence 4 3568999999999999999999998 47 999999999999999999999999998755432 3456789999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhch---h----------------------------hhhccc
Q 014484 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKN---F----------------------------LLLMDS 203 (423)
Q Consensus 155 ~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~---~----------------------------~~~~~~ 203 (423)
.+.+..++.++|+|||||++++|++|..|+............ . ......
T Consensus 169 ~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (308)
T cd06615 169 RLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVN 248 (308)
T ss_pred HhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhc
Confidence 998888999999999999999999999887543211110000 0 000000
Q ss_pred cccCCCC-hhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHh
Q 014484 204 ALEGHFS-NDEGTELVRLASRCLQSEARERPNAKSLVISLMS 244 (423)
Q Consensus 204 ~~~~~~~-~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~ 244 (423)
......+ ..++.++.+++.+||..||++|||+++++++..-
T Consensus 249 ~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~ 290 (308)
T cd06615 249 EPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFI 290 (308)
T ss_pred CCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhh
Confidence 0001111 1246789999999999999999999999998654
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-38 Score=298.80 Aligned_cols=236 Identities=13% Similarity=0.154 Sum_probs=184.5
Q ss_pred CCCCccceeeee--cceeeeeecCCCh---hhHHHHHHHHHHHhcCCCCCccceEeEEEeCC------ceeEEEecCCCC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEAD------ERLLVAEFMPNE 70 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------~~~lv~e~~~~~ 70 (423)
|+||.||.+... +..+++|.+.... .....+.+|+.+++.++||||+++++++.... ..++||||+.+
T Consensus 28 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~- 106 (355)
T cd07874 28 GAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDA- 106 (355)
T ss_pred cCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccceeEEEhhhhcc-
Confidence 899999999864 6677888775432 33457788999999999999999999986543 46899999976
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC---CccccC
Q 014484 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTN 147 (423)
Q Consensus 71 ~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~~t 147 (423)
+|.+.+. ..+++..+..++.|++.||.|||++| |+||||||+|||++.++.+||+|||+++..... ....+|
T Consensus 107 ~l~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~g-ivHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t 181 (355)
T cd07874 107 NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVT 181 (355)
T ss_pred cHHHHHh----hcCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChHHEEECCCCCEEEeeCcccccCCCccccCCcccc
Confidence 7777763 35889999999999999999999999 999999999999999999999999999865543 335688
Q ss_pred cccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchh------------------hhhccc------
Q 014484 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNF------------------LLLMDS------ 203 (423)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~------------------~~~~~~------ 203 (423)
..|+|||++.+..++.++|||||||++|+|++|..||............. ......
T Consensus 182 ~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (355)
T cd07874 182 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAG 261 (355)
T ss_pred CCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCcccc
Confidence 99999999998889999999999999999999999886542111000000 000000
Q ss_pred ---------cc---cCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 204 ---------AL---EGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 204 ---------~~---~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
.. ....+...+.++.++|.+||+.||++|||+.++++|..
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~ 313 (355)
T cd07874 262 LTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPY 313 (355)
T ss_pred ccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcc
Confidence 00 00011223567899999999999999999999998843
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-37 Score=294.80 Aligned_cols=241 Identities=20% Similarity=0.296 Sum_probs=189.0
Q ss_pred CCCCccceeeee-------cceeeeeecCCCh--hhHHHHHHHHHHHhcC-CCCCccceEeEEEeC-CceeEEEecCCCC
Q 014484 2 GGRCSKFSICWF-------HCHLKSSVLESSD--LGETLNLEEAKAVGNL-RSERLANLIGCCYEA-DERLLVAEFMPNE 70 (423)
Q Consensus 2 G~~g~v~~~~~~-------~~~~~~~~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~-~~~~lv~e~~~~~ 70 (423)
|+||.||.+.+. +..+++|.+.... .....+.+|+.++..+ +||||+++++++... ...++||||+++|
T Consensus 18 G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~~g 97 (343)
T cd05103 18 GAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 97 (343)
T ss_pred CccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCceEEEEeccCCC
Confidence 899999999853 3567777775432 2345788999999999 689999999988754 4578999999999
Q ss_pred CHHhhhccCC-----------------------------------------------------------------CCCCC
Q 014484 71 TLAKHLFHWE-----------------------------------------------------------------TQPMK 85 (423)
Q Consensus 71 ~L~~~i~~~~-----------------------------------------------------------------~~~~~ 85 (423)
+|.+++.... ...++
T Consensus 98 ~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (343)
T cd05103 98 NLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQEDLYKKVLT 177 (343)
T ss_pred cHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhhhhhhhhhccCC
Confidence 9999885321 12467
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC------CccccCcccCCccccccC
Q 014484 86 WAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------KSYSTNLAFTPPEYMRTG 159 (423)
Q Consensus 86 ~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~------~~~~~t~~y~aPE~~~~~ 159 (423)
+..+..++.|++.||.|||+++ |+||||||+||+++.++.++|+|||++...... ....++..|+|||.+.+.
T Consensus 178 ~~~~~~~~~qi~~al~~lH~~~-i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 256 (343)
T cd05103 178 LEDLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDR 256 (343)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC-eecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcceECcHHhcCC
Confidence 8889999999999999999999 999999999999999999999999998764322 122345679999999888
Q ss_pred CCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHH
Q 014484 160 RVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238 (423)
Q Consensus 160 ~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v 238 (423)
.++.++||||||+++|+|++ |..|++..... ...............+...++++.+++.+||+.||++|||+.++
T Consensus 257 ~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rps~~ei 332 (343)
T cd05103 257 VYTIQSDVWSFGVLLWEIFSLGASPYPGVKID----EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 332 (343)
T ss_pred CCCchhhHHHHHHHHHHHHHCCCCCCCCcccc----HHHHHHHhccCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 89999999999999999997 77777543111 11111111112222333456789999999999999999999999
Q ss_pred HHHHHhhhh
Q 014484 239 VISLMSLQK 247 (423)
Q Consensus 239 l~~l~~~~~ 247 (423)
+++|..+.+
T Consensus 333 l~~l~~~~~ 341 (343)
T cd05103 333 VEHLGNLLQ 341 (343)
T ss_pred HHHHHHHHh
Confidence 999988764
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-37 Score=287.29 Aligned_cols=241 Identities=18% Similarity=0.246 Sum_probs=185.6
Q ss_pred CCCCccceeeeec----------------ceeeeeecCCC--hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEE
Q 014484 2 GGRCSKFSICWFH----------------CHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLV 63 (423)
Q Consensus 2 G~~g~v~~~~~~~----------------~~~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 63 (423)
||||.||.+.+.+ ..+++|.+... ......+.+|++++.+++|+||+++++++..++..++|
T Consensus 16 G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv 95 (295)
T cd05097 16 GQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGVCVSDDPLCMI 95 (295)
T ss_pred CCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEcCCCccEEE
Confidence 8999999876532 23566666443 23456789999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCC----------CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEcccc
Q 014484 64 AEFMPNETLAKHLFHWE----------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFG 133 (423)
Q Consensus 64 ~e~~~~~~L~~~i~~~~----------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg 133 (423)
|||+++++|.+++.... ...+++..+..++.|++.||.|||+++ ++||||||+||+++.++.+||+|||
T Consensus 96 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~-i~H~dlkp~Nill~~~~~~kl~dfg 174 (295)
T cd05097 96 TEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN-FVHRDLATRNCLVGNHYTIKIADFG 174 (295)
T ss_pred EecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC-eeccccChhhEEEcCCCcEEecccc
Confidence 99999999999885321 124688899999999999999999999 9999999999999999999999999
Q ss_pred ccccCCCCC------ccccCcccCCccccccCCCCCCcceehhHHHHHHHhhC--CCCCCchhhHHhhhc--hhhhhccc
Q 014484 134 LMKNSRDGK------SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSG--KHIPPSHALDLIRSK--NFLLLMDS 203 (423)
Q Consensus 134 ~~~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g--~~~~~~~~~~~~~~~--~~~~~~~~ 203 (423)
++....... ...++..|+|||.+.+..++.++|+|||||++++|+++ ..||........... ........
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 254 (295)
T cd05097 175 MSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGR 254 (295)
T ss_pred cccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhccc
Confidence 987553321 12346789999999888899999999999999999984 444433211111100 00000011
Q ss_pred cccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 204 ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 204 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
......+...++.+.+++.+||+.||.+|||+.+|++.|.
T Consensus 255 ~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 255 QIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred cccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 1112223445778999999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-37 Score=282.72 Aligned_cols=234 Identities=15% Similarity=0.179 Sum_probs=190.3
Q ss_pred CCCCccceeeee--cceeeeeecCCCh---hhHHHHHHHHHHHhcCCCCCccceEeEEEeCC-ceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEAD-ERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~lv~e~~~~~~L~~~ 75 (423)
|++|.||.+... +..+++|.+.... ...+.+.+|+++++.++|+|++++++.+...+ ..++||||+++++|.++
T Consensus 11 g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~l~~~ 90 (257)
T cd08223 11 GSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGFCEGGDLYHK 90 (257)
T ss_pred CCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecccCCCcHHHH
Confidence 889999999874 4556766654322 34557889999999999999999999886544 57899999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccC
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFT 151 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~ 151 (423)
+....+..+++.++..++.+++.|+.+||+++ ++||||||+||+++.++.++|+|||++...... ....+++.|+
T Consensus 91 l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~-i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~ 169 (257)
T cd08223 91 LKEQKGKLLPENQVVEWFVQIAMALQYLHEKH-ILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMASTLIGTPYYM 169 (257)
T ss_pred HHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCchhEEEecCCcEEEecccceEEecccCCccccccCCcCcc
Confidence 97645567999999999999999999999999 999999999999999999999999998755432 2345788999
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCC
Q 014484 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARE 231 (423)
Q Consensus 152 aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (423)
|||.+.+..++.++|+|||||++++|++|..||........ ..... .......+...++++.+++.+||+.||..
T Consensus 170 aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~ 244 (257)
T cd08223 170 SPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSL----VYRII-EGKLPPMPKDYSPELGELIATMLSKRPEK 244 (257)
T ss_pred ChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHH----HHHHH-hcCCCCCccccCHHHHHHHHHHhccCccc
Confidence 99999988899999999999999999999988765321111 11111 11122344567788999999999999999
Q ss_pred CCCHHHHHHH
Q 014484 232 RPNAKSLVIS 241 (423)
Q Consensus 232 Rps~~~vl~~ 241 (423)
|||+.+++++
T Consensus 245 Rp~~~~~l~~ 254 (257)
T cd08223 245 RPSVKSILRQ 254 (257)
T ss_pred CCCHHHHhcC
Confidence 9999999876
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-37 Score=281.47 Aligned_cols=235 Identities=17% Similarity=0.189 Sum_probs=192.1
Q ss_pred CCCCccceeeee--cceeeeeecCCC---hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
|+||.||.+... +..+++|.+... ......+.+|++++++++|+||+++++++.+.+..+++|||+++++|.+++
T Consensus 11 g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~~ 90 (256)
T cd08221 11 GAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYANGGTLYDKI 90 (256)
T ss_pred cCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEecCCCcHHHHH
Confidence 788977777653 566666655432 334567889999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC----ccccCcccCC
Q 014484 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK----SYSTNLAFTP 152 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~----~~~~t~~y~a 152 (423)
.+..+..+++.++..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++....... ...+++.|+|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~y~a 169 (256)
T cd08221 91 VRQKGQLFEEEMVLWYLFQIVSAVSYIHKAG-ILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAETVVGTPYYMS 169 (256)
T ss_pred HhccccCCCHHHHHHHHHHHHHHHHHHHhCC-ccccCCChHhEEEeCCCCEEECcCcceEEcccccccccccCCCccccC
Confidence 7544567899999999999999999999999 9999999999999999999999999987654433 3457899999
Q ss_pred ccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCC
Q 014484 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (423)
Q Consensus 153 PE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (423)
||.+.+..++.++|+||||+++++|++|..||........ ....... .....+...+.++.+++.+||..+|.+|
T Consensus 170 pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~R 244 (256)
T cd08221 170 PELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNL----VVKIVQG-NYTPVVSVYSSELISLVHSLLQQDPEKR 244 (256)
T ss_pred HhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHH----HHHHHcC-CCCCCccccCHHHHHHHHHHcccCcccC
Confidence 9999888889999999999999999999988765322111 1111111 1122334567889999999999999999
Q ss_pred CCHHHHHHHH
Q 014484 233 PNAKSLVISL 242 (423)
Q Consensus 233 ps~~~vl~~l 242 (423)
||+.++++++
T Consensus 245 ~s~~~ll~~~ 254 (256)
T cd08221 245 PTADEVLDQP 254 (256)
T ss_pred CCHHHHhhCc
Confidence 9999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-37 Score=283.19 Aligned_cols=239 Identities=17% Similarity=0.256 Sum_probs=193.3
Q ss_pred CCCCccceeeee--cc----eeeeeecCCCh--hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHH
Q 014484 2 GGRCSKFSICWF--HC----HLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLA 73 (423)
Q Consensus 2 G~~g~v~~~~~~--~~----~~~~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 73 (423)
|+||.||++.+. +. .+++|...... .....+.+|+.++..++||||+++++++.. ...++||||+++|+|.
T Consensus 18 g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~~g~L~ 96 (279)
T cd05057 18 GAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQLITQLMPLGCLL 96 (279)
T ss_pred CCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEEEEecCCCCcHH
Confidence 899999999874 22 35666654443 345678899999999999999999999987 6789999999999999
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCCc------cccC
Q 014484 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS------YSTN 147 (423)
Q Consensus 74 ~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~------~~~t 147 (423)
+++.. ....+++..+..++.|++.||.|||+++ ++||||||+||+++.++.++|+|||+++....... ..++
T Consensus 97 ~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~-i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~ 174 (279)
T cd05057 97 DYVRN-HKDNIGSQYLLNWCVQIAKGMSYLEEKR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVP 174 (279)
T ss_pred HHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-EEecccCcceEEEcCCCeEEECCCcccccccCcccceecCCCccc
Confidence 99864 3345899999999999999999999999 99999999999999999999999999886553322 1235
Q ss_pred cccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcc
Q 014484 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (423)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (423)
..|+|||.+....++.++|+|||||+++|+++ |..||...... .+...+........+..++.++.+++.+||.
T Consensus 175 ~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 249 (279)
T cd05057 175 IKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAV-----EIPDLLEKGERLPQPPICTIDVYMVLVKCWM 249 (279)
T ss_pred ccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHH-----HHHHHHhCCCCCCCCCCCCHHHHHHHHHHcC
Confidence 67999999988889999999999999999998 88887653221 1222222222223344456789999999999
Q ss_pred cCcCCCCCHHHHHHHHHhhhhh
Q 014484 227 SEARERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 227 ~dp~~Rps~~~vl~~l~~~~~~ 248 (423)
.||..||++.++++.|..+.+.
T Consensus 250 ~~p~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05057 250 IDAESRPTFKELINEFSKMARD 271 (279)
T ss_pred CChhhCCCHHHHHHHHHHHHhC
Confidence 9999999999999999987654
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-37 Score=283.92 Aligned_cols=233 Identities=16% Similarity=0.210 Sum_probs=187.2
Q ss_pred CCCCccceeeee--cceeeeeecCCCh-hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
|+||.||.+.+. +..+++|++.... .....+.+|+.+++.++||||+++++++..++..++||||+++++|.+++..
T Consensus 20 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~ 99 (267)
T cd06645 20 GTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHV 99 (267)
T ss_pred CCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCCCcHHHHHHh
Confidence 899999999874 5667777765443 2345678899999999999999999999999999999999999999999853
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccCCcc
Q 014484 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPPE 154 (423)
Q Consensus 79 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~aPE 154 (423)
.+.+++.++..++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||++...... ....|+..|+|||
T Consensus 100 --~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE 176 (267)
T cd06645 100 --TGPLSESQIAYVSRETLQGLYYLHSKG-KMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKSFIGTPYWMAPE 176 (267)
T ss_pred --cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEECcceeeeEccCcccccccccCcccccChh
Confidence 457999999999999999999999999 999999999999999999999999998654432 3456889999999
Q ss_pred ccc---cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhcccccc-CCC--ChhHHHHHHHHHHHhcccC
Q 014484 155 YMR---TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALE-GHF--SNDEGTELVRLASRCLQSE 228 (423)
Q Consensus 155 ~~~---~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~l~~li~~cl~~d 228 (423)
.+. ...++.++|+|||||++|+|++|..|+...... ............ ... ...++..+.+++.+||+.+
T Consensus 177 ~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 252 (267)
T cd06645 177 VAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPM----RALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKN 252 (267)
T ss_pred hhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccch----hhHHhhhccCCCCCcccccCCCCHHHHHHHHHHccCC
Confidence 874 455889999999999999999999887543111 111111111111 111 1235678999999999999
Q ss_pred cCCCCCHHHHHHH
Q 014484 229 ARERPNAKSLVIS 241 (423)
Q Consensus 229 p~~Rps~~~vl~~ 241 (423)
|++|||+++++.|
T Consensus 253 P~~R~~~~~ll~~ 265 (267)
T cd06645 253 PKKRPTAEKLLQH 265 (267)
T ss_pred chhCcCHHHHhcC
Confidence 9999999999876
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-37 Score=293.27 Aligned_cols=236 Identities=17% Similarity=0.141 Sum_probs=187.2
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+... +..+++|++.... .....+.+|+.++..++|+||+.+++++.+++..|+||||++||+|.++
T Consensus 12 G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~ 91 (331)
T cd05597 12 GAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMDYYVGGDLLTL 91 (331)
T ss_pred cCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEecCCCCcHHHH
Confidence 899999998874 6678888875422 2345678899999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC-----ccccCccc
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-----SYSTNLAF 150 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-----~~~~t~~y 150 (423)
+.+ .+..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.++|+|||++....... ...||+.|
T Consensus 92 l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y 169 (331)
T cd05597 92 LSK-FEDRLPEDMARFYLAEMVLAIDSVHQLG-YVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQSNVAVGTPDY 169 (331)
T ss_pred HHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEECCCCHHHEEECCCCCEEEEECCceeecCCCCCccccceeccccc
Confidence 954 2456899999999999999999999999 9999999999999999999999999987654322 23589999
Q ss_pred CCcccccc-----CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccc---cCCCChhHHHHHHHHHH
Q 014484 151 TPPEYMRT-----GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSAL---EGHFSNDEGTELVRLAS 222 (423)
Q Consensus 151 ~aPE~~~~-----~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~ 222 (423)
+|||++.. ..++.++||||+||++|+|++|..||......... ........ ........+.++.+++.
T Consensus 170 ~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~~~~~~li~ 245 (331)
T cd05597 170 ISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETY----GKIMNHKEHFQFPPDVTDVSEEAKDLIR 245 (331)
T ss_pred cCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHH----HHHHcCCCcccCCCccCCCCHHHHHHHH
Confidence 99999863 35788999999999999999999998654222111 11111111 11112235788999999
Q ss_pred HhcccCcCC--CCCHHHHHHHHH
Q 014484 223 RCLQSEARE--RPNAKSLVISLM 243 (423)
Q Consensus 223 ~cl~~dp~~--Rps~~~vl~~l~ 243 (423)
+||..++.. |+++++++.|..
T Consensus 246 ~ll~~~~~r~~r~~~~~~l~hp~ 268 (331)
T cd05597 246 RLICSPETRLGRNGLQDFKDHPF 268 (331)
T ss_pred HHccCcccccCCCCHHHHhcCCC
Confidence 988654443 789999999854
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-37 Score=285.83 Aligned_cols=241 Identities=19% Similarity=0.259 Sum_probs=186.0
Q ss_pred CCCCccceeeee------------------cceeeeeecCCC--hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCcee
Q 014484 2 GGRCSKFSICWF------------------HCHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERL 61 (423)
Q Consensus 2 G~~g~v~~~~~~------------------~~~~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 61 (423)
|+||.||.+.+. ...+++|++... ......+.+|+.+++.++|+||+++++++..++..+
T Consensus 16 G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~ 95 (296)
T cd05095 16 GQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLLAVCITSDPLC 95 (296)
T ss_pred CCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence 899999987542 224566666543 334568899999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCC---------CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccc
Q 014484 62 LVAEFMPNETLAKHLFHWE---------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSF 132 (423)
Q Consensus 62 lv~e~~~~~~L~~~i~~~~---------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Df 132 (423)
+||||+++++|.+++.... ...+++.++..++.|++.||.|||+++ ++||||||+||+++.++.++|+||
T Consensus 96 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~-i~H~dlkp~Nili~~~~~~~l~df 174 (296)
T cd05095 96 MITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN-FVHRDLATRNCLVGKNYTIKIADF 174 (296)
T ss_pred EEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCC-eecccCChheEEEcCCCCEEeccC
Confidence 9999999999999986422 124778899999999999999999999 999999999999999999999999
Q ss_pred cccccCCCCC------ccccCcccCCccccccCCCCCCcceehhHHHHHHHhh--CCCCCCchhhHHhhh--chhhhhcc
Q 014484 133 GLMKNSRDGK------SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS--GKHIPPSHALDLIRS--KNFLLLMD 202 (423)
Q Consensus 133 g~~~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~--g~~~~~~~~~~~~~~--~~~~~~~~ 202 (423)
|+++...... ...+++.|++||...++.++.++|+|||||++|||++ |..|+.......... ........
T Consensus 175 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 254 (296)
T cd05095 175 GMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQG 254 (296)
T ss_pred cccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHHHHHHHHhhcc
Confidence 9987654322 1233578999999888889999999999999999998 555554321111100 00000000
Q ss_pred ccccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 203 SALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 203 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
.......+..+++.+.+++.+||+.||.+|||+.++++.|.
T Consensus 255 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 255 RQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred ccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 11111223446688999999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-38 Score=305.15 Aligned_cols=233 Identities=17% Similarity=0.168 Sum_probs=180.6
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW 79 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~ 79 (423)
|+||.||++.+. +..+++|.. ....+.+|++++++++|+|||++++++..++..++|||++. ++|.+++..
T Consensus 180 G~~G~Vy~a~~~~~~~~vavK~~-----~~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~-~~L~~~l~~- 252 (461)
T PHA03211 180 GSEGCVFESSHPDYPQRVVVKAG-----WYASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR-SDLYTYLGA- 252 (461)
T ss_pred CCCeEEEEEEECCCCCEEEEecc-----cccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC-CCHHHHHHh-
Confidence 899999999985 455666642 22346789999999999999999999999999999999995 588888854
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC------CccccCcccCCc
Q 014484 80 ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------KSYSTNLAFTPP 153 (423)
Q Consensus 80 ~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~------~~~~~t~~y~aP 153 (423)
....+++..++.|+.|++.||.|||+++ |+||||||+|||++.++.++|+|||+++..... ....||..|+||
T Consensus 253 ~~~~l~~~~~~~i~~qi~~aL~yLH~~g-IvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~AP 331 (461)
T PHA03211 253 RLRPLGLAQVTAVARQLLSAIDYIHGEG-IIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHYGIAGTVDTNAP 331 (461)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHCC-EEECcCCHHHEEECCCCCEEEcccCCceecccccccccccccCCCcCCcCH
Confidence 2346999999999999999999999999 999999999999999999999999998765332 124589999999
Q ss_pred cccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhh---hchhhhhccc--------------------------c
Q 014484 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIR---SKNFLLLMDS--------------------------A 204 (423)
Q Consensus 154 E~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~---~~~~~~~~~~--------------------------~ 204 (423)
|++.+..++.++|||||||++|||++|..++......... ...+..++.. .
T Consensus 332 E~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 411 (461)
T PHA03211 332 EVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARN 411 (461)
T ss_pred HHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcc
Confidence 9999889999999999999999999987554321100000 0000000000 0
Q ss_pred ccCC-----CC--hhHHHHHHHHHHHhcccCcCCCCCHHHHHHHH
Q 014484 205 LEGH-----FS--NDEGTELVRLASRCLQSEARERPNAKSLVISL 242 (423)
Q Consensus 205 ~~~~-----~~--~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l 242 (423)
.... +. ...+.++.+||.+||+.||.+|||+.|+|+|-
T Consensus 412 ~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp 456 (461)
T PHA03211 412 RRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLP 456 (461)
T ss_pred cCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCc
Confidence 0000 00 02345789999999999999999999999884
|
|
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-37 Score=293.02 Aligned_cols=239 Identities=21% Similarity=0.286 Sum_probs=206.7
Q ss_pred CCCCCccceeeee------cceeeeeecCCC--hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCH
Q 014484 1 MGGRCSKFSICWF------HCHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (423)
Q Consensus 1 ~G~~g~v~~~~~~------~~~~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 72 (423)
.|-||.||.+++. +..|++|..+.. ..+.+.|+.|..+++.++||||++++|+|.+.. .|+|||+++-|.|
T Consensus 399 ~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~P-~WivmEL~~~GEL 477 (974)
T KOG4257|consen 399 EGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQP-MWIVMELAPLGEL 477 (974)
T ss_pred CCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeeccc-eeEEEecccchhH
Confidence 3779999999995 345666665542 245788999999999999999999999998754 8999999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCCccc-----cC
Q 014484 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYS-----TN 147 (423)
Q Consensus 73 ~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~-----~t 147 (423)
..+++. ....++......++.||+.||.|||++. +|||||-..|||+...-.+||+|||+++-.....-.. -+
T Consensus 478 r~yLq~-nk~sL~l~tL~ly~~Qi~talaYLeSkr-fVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYkaS~~kLP 555 (974)
T KOG4257|consen 478 REYLQQ-NKDSLPLRTLTLYCYQICTALAYLESKR-FVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKASRGKLP 555 (974)
T ss_pred HHHHHh-ccccchHHHHHHHHHHHHHHHHHHHhhc-hhhhhhhhhheeecCcceeeecccchhhhccccchhhccccccc
Confidence 999975 3456999999999999999999999999 9999999999999999999999999999777553322 25
Q ss_pred cccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcc
Q 014484 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (423)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (423)
+-|||||.+....++.++|||-||+.+||++. |..||.+ ..+.++...++..-+.+.|+.||+.+..++.+||.
T Consensus 556 IKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqg-----vkNsDVI~~iEnGeRlP~P~nCPp~LYslmskcWa 630 (974)
T KOG4257|consen 556 IKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQG-----VKNSDVIGHIENGERLPCPPNCPPALYSLMSKCWA 630 (974)
T ss_pred eeecCccccchhcccchhhHHHHHHHHHHHHHhcCCcccc-----ccccceEEEecCCCCCCCCCCCChHHHHHHHHHhc
Confidence 67999999999999999999999999999876 7778887 46667777777777788899999999999999999
Q ss_pred cCcCCCCCHHHHHHHHHhhhh
Q 014484 227 SEARERPNAKSLVISLMSLQK 247 (423)
Q Consensus 227 ~dp~~Rps~~~vl~~l~~~~~ 247 (423)
.||.+||.+.++...|..+..
T Consensus 631 yeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 631 YEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred cCcccCCcHHHHHHHHHHHHH
Confidence 999999999999988866544
|
|
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-37 Score=291.64 Aligned_cols=240 Identities=16% Similarity=0.221 Sum_probs=186.9
Q ss_pred CCCCccceeeee--cceeeeeecCCCh--hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~ 77 (423)
|+||.||++.+. +..+++|.+.... .....+.+|+.++..++||||+++++++..++..++||||+.+ +|.+++.
T Consensus 17 G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~ 95 (309)
T cd07872 17 GTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLDK-DLKQYMD 95 (309)
T ss_pred cCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeCCCC-CHHHHHH
Confidence 899999999874 5567777664332 2334677899999999999999999999999999999999976 8888875
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccCCc
Q 014484 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPP 153 (423)
Q Consensus 78 ~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~aP 153 (423)
. .+..+++..+..++.|++.||.|||+++ |+||||||+||+++.++.++|+|||+++..... ....+++.|+||
T Consensus 96 ~-~~~~~~~~~~~~~~~qi~~aL~~lH~~~-ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aP 173 (309)
T cd07872 96 D-CGNIMSMHNVKIFLYQILRGLAYCHRRK-VLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSNEVVTLWYRPP 173 (309)
T ss_pred h-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEECccccceecCCCccccccccccccccCC
Confidence 4 3446899999999999999999999999 999999999999999999999999998754322 234568899999
Q ss_pred ccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhh-----------hhc------cccccC-------C
Q 014484 154 EYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFL-----------LLM------DSALEG-------H 208 (423)
Q Consensus 154 E~~~~-~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~-----------~~~------~~~~~~-------~ 208 (423)
|.+.+ ..++.++|||||||++|+|+||..||.............. ... ...... .
T Consensus 174 E~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (309)
T cd07872 174 DVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLIN 253 (309)
T ss_pred HHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhh
Confidence 98865 4588999999999999999999998865432111100000 000 000000 0
Q ss_pred CChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHh
Q 014484 209 FSNDEGTELVRLASRCLQSEARERPNAKSLVISLMS 244 (423)
Q Consensus 209 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~ 244 (423)
....+++++.++|.+||+.||.+|||+++++.|..-
T Consensus 254 ~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~ 289 (309)
T cd07872 254 HAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYF 289 (309)
T ss_pred hccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhh
Confidence 112356789999999999999999999999987543
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-37 Score=299.66 Aligned_cols=238 Identities=16% Similarity=0.177 Sum_probs=187.1
Q ss_pred CCCCccceeeee--cceeeeeecCCCh---hhHHHHHHHHHHHhcCCCCCccceEeEEEeCC-----ceeEEEecCCCCC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEAD-----ERLLVAEFMPNET 71 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-----~~~lv~e~~~~~~ 71 (423)
|+||.||.+... +..+++|.+.... .....+.+|++++..++||||+++++++...+ ..|+||||+.+ +
T Consensus 11 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~-~ 89 (372)
T cd07853 11 GAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYVVTELMQS-D 89 (372)
T ss_pred CCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEEEeecccc-C
Confidence 899999999863 6778888775432 23457889999999999999999999998876 78999999964 8
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-----Ccccc
Q 014484 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYST 146 (423)
Q Consensus 72 L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~~ 146 (423)
|.+++. ..+.+++..+..++.||+.||.|||+++ ++||||||+|||++.++.++|+|||+++..... ....+
T Consensus 90 l~~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~ 166 (372)
T cd07853 90 LHKIIV--SPQPLSSDHVKVFLYQILRGLKYLHSAG-ILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESKHMTQEVV 166 (372)
T ss_pred HHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChHHEEECCCCCEEeccccceeecccCccccCCCCCc
Confidence 888874 3457999999999999999999999999 999999999999999999999999998754422 22356
Q ss_pred CcccCCccccccCC-CCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhch------------------hhh-hcccccc
Q 014484 147 NLAFTPPEYMRTGR-VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKN------------------FLL-LMDSALE 206 (423)
Q Consensus 147 t~~y~aPE~~~~~~-~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~------------------~~~-~~~~~~~ 206 (423)
+..|+|||.+.+.. ++.++||||+||++|||++|..||............ ... .......
T Consensus 167 ~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 246 (372)
T cd07853 167 TQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHK 246 (372)
T ss_pred CCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCC
Confidence 88999999988754 789999999999999999999888654211100000 000 0000000
Q ss_pred -------CCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 207 -------GHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 207 -------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
.......++++.++|.+||+.||.+|||+.+++.|..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~ 290 (372)
T cd07853 247 PPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPY 290 (372)
T ss_pred CCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHh
Confidence 0122234678999999999999999999999998864
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-37 Score=287.55 Aligned_cols=239 Identities=16% Similarity=0.280 Sum_probs=189.6
Q ss_pred CCCCccceeeee--cc----eeeeeecCCCh--hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHH
Q 014484 2 GGRCSKFSICWF--HC----HLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLA 73 (423)
Q Consensus 2 G~~g~v~~~~~~--~~----~~~~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 73 (423)
|+||.||++.+. +. .+++|.+.... .....+.+|+.++..++||||+++++++... ..++++||+++|+|.
T Consensus 18 G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~v~e~~~~g~l~ 96 (303)
T cd05110 18 GAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQLVTQLMPHGCLL 96 (303)
T ss_pred CCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-CceeeehhcCCCCHH
Confidence 899999999874 22 34556554432 2244688999999999999999999998754 467999999999999
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC------ccccC
Q 014484 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK------SYSTN 147 (423)
Q Consensus 74 ~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~------~~~~t 147 (423)
+++.. ....+++..++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++...... ...++
T Consensus 97 ~~~~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~~-ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~ 174 (303)
T cd05110 97 DYVHE-HKDNIGSQLLLNWCVQIAKGMMYLEERR-LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMP 174 (303)
T ss_pred HHHHh-cccCCCHHHHHHHHHHHHHHHHHHhhcC-eeccccccceeeecCCCceEEccccccccccCcccccccCCCccc
Confidence 99864 2346899999999999999999999999 9999999999999999999999999998654322 12346
Q ss_pred cccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcc
Q 014484 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (423)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (423)
..|+|||.+.+..++.++|||||||++|||++ |..||....... ....+........+..++.++.+++.+||.
T Consensus 175 ~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~li~~c~~ 249 (303)
T cd05110 175 IKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE-----IPDLLEKGERLPQPPICTIDVYMVMVKCWM 249 (303)
T ss_pred cccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH-----HHHHHHCCCCCCCCCCCCHHHHHHHHHHcC
Confidence 78999999988889999999999999999997 777775532111 111121112222233456789999999999
Q ss_pred cCcCCCCCHHHHHHHHHhhhhh
Q 014484 227 SEARERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 227 ~dp~~Rps~~~vl~~l~~~~~~ 248 (423)
.+|+.||+++++++.+..+.+.
T Consensus 250 ~~p~~Rp~~~~l~~~l~~~~~~ 271 (303)
T cd05110 250 IDADSRPKFKELAAEFSRMARD 271 (303)
T ss_pred CChhhCcCHHHHHHHHHHHHhc
Confidence 9999999999999999887655
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-37 Score=287.93 Aligned_cols=235 Identities=17% Similarity=0.258 Sum_probs=192.4
Q ss_pred CCCCccceeeee--cceeeeeecCCChh-hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDL-GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
|++|.||.+.+. +..+++|.+..... ....+.+|+.+++.++||||+++++++..++..++||||+++++|.+++.
T Consensus 30 g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~- 108 (296)
T cd06655 30 GASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVT- 108 (296)
T ss_pred CCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEecCCCcHHHHHH-
Confidence 789999999863 66777776654332 35678899999999999999999999999999999999999999999884
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccCCcc
Q 014484 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPPE 154 (423)
Q Consensus 79 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~aPE 154 (423)
...+++.++..++.|++.||.|||+++ ++||||||+||+++.++.++|+|||++...... ....++..|+|||
T Consensus 109 --~~~l~~~~~~~i~~~l~~al~~LH~~~-i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE 185 (296)
T cd06655 109 --ETCMDEAQIAAVCRECLQALEFLHANQ-VIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPE 185 (296)
T ss_pred --hcCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEccCccchhcccccccCCCcCCCccccCcc
Confidence 346899999999999999999999999 999999999999999999999999998765433 2345788999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhc-cccccCCCChhHHHHHHHHHHHhcccCcCCCC
Q 014484 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLM-DSALEGHFSNDEGTELVRLASRCLQSEARERP 233 (423)
Q Consensus 155 ~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 233 (423)
.+.+..++.++|+|||||++|+|++|..||........ ..... ........+..+++.+.++|.+||..||.+||
T Consensus 186 ~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp 261 (296)
T cd06655 186 VVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA----LYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRG 261 (296)
T ss_pred hhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHhcCCcccCCcccCCHHHHHHHHHHhhcChhhCC
Confidence 99988899999999999999999999988865321111 11111 11111123445677899999999999999999
Q ss_pred CHHHHHHHHHh
Q 014484 234 NAKSLVISLMS 244 (423)
Q Consensus 234 s~~~vl~~l~~ 244 (423)
|+.+++.+-.-
T Consensus 262 t~~~il~~~~~ 272 (296)
T cd06655 262 SAKELLQHPFL 272 (296)
T ss_pred CHHHHhhChHh
Confidence 99999987443
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=301.16 Aligned_cols=235 Identities=14% Similarity=0.178 Sum_probs=185.0
Q ss_pred CCCCccceeeee----cceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhc
Q 014484 2 GGRCSKFSICWF----HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (423)
Q Consensus 2 G~~g~v~~~~~~----~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~ 77 (423)
|+||.||.+... +..+++|.+... ....+|+++++.++||||+++++++......++|||++. ++|.+++.
T Consensus 103 G~~g~Vy~~~~~~~~~~~~v~vK~~~~~----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~ 177 (392)
T PHA03207 103 GSEGEVFVCTKHGDEQRKKVIVKAVTGG----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPKYK-CDLFTYVD 177 (392)
T ss_pred CCCeEEEEEEEcCCccceeEEEEecccc----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehhcC-CCHHHHHH
Confidence 899999998764 344566655433 345689999999999999999999999999999999996 58888884
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC------CccccCcccC
Q 014484 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------KSYSTNLAFT 151 (423)
Q Consensus 78 ~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~------~~~~~t~~y~ 151 (423)
....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.++|+|||+++..... ....||+.|+
T Consensus 178 --~~~~l~~~~~~~i~~ql~~aL~~LH~~g-ivHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~ 254 (392)
T PHA03207 178 --RSGPLPLEQAITIQRRLLEALAYLHGRG-IIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQCYGWSGTLETN 254 (392)
T ss_pred --hcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEcCCCCEEEccCccccccCcccccccccccccccCcc
Confidence 3567999999999999999999999999 999999999999999999999999998765432 2346899999
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHh--hhchhhh----------------------hccccccC
Q 014484 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLI--RSKNFLL----------------------LMDSALEG 207 (423)
Q Consensus 152 aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~--~~~~~~~----------------------~~~~~~~~ 207 (423)
|||++.+..++.++|||||||++|||++|..||.+...... ....+.. ........
T Consensus 255 aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (392)
T PHA03207 255 SPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRP 334 (392)
T ss_pred CHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccC
Confidence 99999988999999999999999999999998865321100 0000000 00000011
Q ss_pred CC--C-----hhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHh
Q 014484 208 HF--S-----NDEGTELVRLASRCLQSEARERPNAKSLVISLMS 244 (423)
Q Consensus 208 ~~--~-----~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~ 244 (423)
.+ + ...+.++.++|.+||+.||++|||+.+++.|-.-
T Consensus 335 ~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f 378 (392)
T PHA03207 335 PYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLF 378 (392)
T ss_pred CccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchh
Confidence 01 1 1235678999999999999999999999998654
|
|
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-37 Score=284.29 Aligned_cols=233 Identities=16% Similarity=0.238 Sum_probs=192.4
Q ss_pred CCCCccceeeee--cceeeeeecCCCh--hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~ 77 (423)
|++|.||++.+. +..++++.+.... .....+.+|+++++.++|+||+++++++.++...++|+||+++++|.+++.
T Consensus 12 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~ 91 (274)
T cd06609 12 GSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYCGGGSCLDLLK 91 (274)
T ss_pred CCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEeeCCCcHHHHHh
Confidence 899999999874 5667777765432 335578899999999999999999999999999999999999999999985
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccCCc
Q 014484 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPP 153 (423)
Q Consensus 78 ~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~aP 153 (423)
. ..+++..+..++.|++.||.|||+++ ++||||+|+||++++++.++|+|||+++..... ....++..|+||
T Consensus 92 ~---~~~~~~~~~~~~~ql~~~l~~lh~~~-i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~P 167 (274)
T cd06609 92 P---GKLDETYIAFILREVLLGLEYLHEEG-KIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNTFVGTPFWMAP 167 (274)
T ss_pred h---cCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEECCCCCEEEcccccceeecccccccccccCCccccCh
Confidence 3 37899999999999999999999999 999999999999999999999999998766543 234578889999
Q ss_pred cccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChh-HHHHHHHHHHHhcccCcCCC
Q 014484 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND-EGTELVRLASRCLQSEARER 232 (423)
Q Consensus 154 E~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~~cl~~dp~~R 232 (423)
|.+.+..++.++|+|||||++|+|++|..||...... .....+........+.. +++++.+++.+||..||++|
T Consensus 168 E~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~p~~R 242 (274)
T cd06609 168 EVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPM-----RVLFLIPKNNPPSLEGNKFSKPFKDFVSLCLNKDPKER 242 (274)
T ss_pred hhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchH-----HHHHHhhhcCCCCCcccccCHHHHHHHHHHhhCChhhC
Confidence 9999888999999999999999999999887543211 11111111222222223 67789999999999999999
Q ss_pred CCHHHHHHHHH
Q 014484 233 PNAKSLVISLM 243 (423)
Q Consensus 233 ps~~~vl~~l~ 243 (423)
||+++++.+-.
T Consensus 243 pt~~~il~~~~ 253 (274)
T cd06609 243 PSAKELLKHKF 253 (274)
T ss_pred cCHHHHhhChh
Confidence 99999998743
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-37 Score=280.59 Aligned_cols=237 Identities=14% Similarity=0.147 Sum_probs=190.1
Q ss_pred CCCCccceeeee--cceeeeeecCCCh-hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
|+||.||.+.+. +..++++++.... .....+.+|+.+++.++||||+++++++..++..+++|||+.+++|.+++..
T Consensus 14 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~~~~~l~~~~~~ 93 (262)
T cd06613 14 GTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQV 93 (262)
T ss_pred CCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCCCCCcHHHHHHh
Confidence 889999999874 4556666665433 2456788999999999999999999999999999999999999999998864
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccCCcc
Q 014484 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPPE 154 (423)
Q Consensus 79 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~aPE 154 (423)
....+++..+..++.|++.||.|||+++ ++|+||+|+||+++.++.++|+|||++...... ....++..|+|||
T Consensus 94 -~~~~l~~~~~~~~~~ql~~~l~~lh~~~-i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~Pe 171 (262)
T cd06613 94 -TRGPLSELQIAYVCRETLKGLAYLHETG-KIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKSFIGTPYWMAPE 171 (262)
T ss_pred -hccCCCHHHHHHHHHHHHHHHHHHHhCC-ceecCCChhhEEECCCCCEEECccccchhhhhhhhccccccCCccccCch
Confidence 2356999999999999999999999999 999999999999999999999999998765432 2345788899999
Q ss_pred ccccC---CCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCC
Q 014484 155 YMRTG---RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARE 231 (423)
Q Consensus 155 ~~~~~---~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (423)
.+.+. .++.++|+|||||++|+|++|..|+.................. ......+...+.++.+++.+||..+|.+
T Consensus 172 ~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~ 250 (262)
T cd06613 172 VAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFP-PPKLKDKEKWSPVFHDFIKKCLTKDPKK 250 (262)
T ss_pred hhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC-CccccchhhhhHHHHHHHHHHcCCChhh
Confidence 98776 7889999999999999999999887653211111100000000 1111123446788999999999999999
Q ss_pred CCCHHHHHHH
Q 014484 232 RPNAKSLVIS 241 (423)
Q Consensus 232 Rps~~~vl~~ 241 (423)
|||+.+++.+
T Consensus 251 Rpt~~~il~~ 260 (262)
T cd06613 251 RPTATKLLQH 260 (262)
T ss_pred CCCHHHHhcC
Confidence 9999999865
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-37 Score=280.78 Aligned_cols=233 Identities=15% Similarity=0.218 Sum_probs=192.7
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW 79 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~ 79 (423)
|+||.||.+.+. +..+++|.+..... .+.+.+|+++++.++||||+++++++..+...|++|||+++++|.+++..
T Consensus 14 g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~- 91 (256)
T cd06612 14 GSYGSVYKAIHKETGQVVAIKVVPVEED-LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKI- 91 (256)
T ss_pred CCCeEEEEEEEcCCCcEEEEEEeecHHH-HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCCCCcHHHHHHh-
Confidence 789999999985 46677777765543 67899999999999999999999999999999999999999999999853
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC----ccccCcccCCccc
Q 014484 80 ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK----SYSTNLAFTPPEY 155 (423)
Q Consensus 80 ~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~----~~~~t~~y~aPE~ 155 (423)
.+..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++....... ...++..|+|||.
T Consensus 92 ~~~~l~~~~~~~~~~~l~~~l~~lh~~~-i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~ 170 (256)
T cd06612 92 TNKTLTEEEIAAILYQTLKGLEYLHSNK-KIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEV 170 (256)
T ss_pred CccCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCcceEEECCCCcEEEcccccchhcccCccccccccCCccccCHHH
Confidence 3457899999999999999999999999 9999999999999999999999999988655432 2347889999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhcc-ccccCCCChhHHHHHHHHHHHhcccCcCCCCC
Q 014484 156 MRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD-SALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (423)
Q Consensus 156 ~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (423)
+.+..++.++||||||+++++|++|..|+...... ........ .......+..++.++.+++.+||+.||..|||
T Consensus 171 ~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps 246 (256)
T cd06612 171 IQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPM----RAIFMIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPS 246 (256)
T ss_pred HhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchh----hhhhhhccCCCCCCCchhhcCHHHHHHHHHHHhcChhhCcC
Confidence 99888999999999999999999999887653111 11111110 01111123345678999999999999999999
Q ss_pred HHHHHHH
Q 014484 235 AKSLVIS 241 (423)
Q Consensus 235 ~~~vl~~ 241 (423)
+.+++.+
T Consensus 247 ~~~il~~ 253 (256)
T cd06612 247 AIQLLQH 253 (256)
T ss_pred HHHHhcC
Confidence 9999875
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-37 Score=283.98 Aligned_cols=238 Identities=18% Similarity=0.246 Sum_probs=189.5
Q ss_pred CCCCCccceeeee-------cceeeeeecCCChh--hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCC
Q 014484 1 MGGRCSKFSICWF-------HCHLKSSVLESSDL--GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNET 71 (423)
Q Consensus 1 ~G~~g~v~~~~~~-------~~~~~~~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 71 (423)
.|+||.||.+.+. ...+++|.+..... ....+.+|++++.+++|+||+++++++...+..++||||+++++
T Consensus 15 ~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 94 (275)
T cd05046 15 RGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHYMILEYTDLGD 94 (275)
T ss_pred ccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcceEEEEecCCCc
Confidence 3899999999864 23466666654433 35678999999999999999999999999899999999999999
Q ss_pred HHhhhccCCC-------CCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC---
Q 014484 72 LAKHLFHWET-------QPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--- 141 (423)
Q Consensus 72 L~~~i~~~~~-------~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--- 141 (423)
|.+++..... ..+++..+..++.|++.||.|||+++ ++||||||+||+++.++.++++|||+++.....
T Consensus 95 L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~-i~H~dlkp~Nili~~~~~~~l~~~~~~~~~~~~~~~ 173 (275)
T cd05046 95 LKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR-FVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYY 173 (275)
T ss_pred HHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC-cccCcCccceEEEeCCCcEEEcccccccccCccccc
Confidence 9999964331 15899999999999999999999999 999999999999999999999999998644321
Q ss_pred --CccccCcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHH
Q 014484 142 --KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELV 218 (423)
Q Consensus 142 --~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 218 (423)
....++..|+|||.+.+...+.++||||||+++++|++ |..||...... ...............+..++..+.
T Consensus 174 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~ 249 (275)
T cd05046 174 KLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE----EVLNRLQAGKLELPVPEGCPSRLY 249 (275)
T ss_pred ccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchH----HHHHHHHcCCcCCCCCCCCCHHHH
Confidence 22345677999999988888999999999999999998 56565432111 111111111222223445678899
Q ss_pred HHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 219 RLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 219 ~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
+++.+||+.||.+|||+.+++..|.
T Consensus 250 ~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 250 KLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred HHHHHHcCCCcccCCCHHHHHHHhc
Confidence 9999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-37 Score=291.48 Aligned_cols=237 Identities=12% Similarity=0.179 Sum_probs=177.6
Q ss_pred CCCCccceeeee----cceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEe--CCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF----HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYE--ADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~----~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||++.+. +..+++|.+..... ...+.+|+.+++.++||||+++++++.. +...++||||+.+ +|.++
T Consensus 12 G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~ 89 (317)
T cd07868 12 GTYGHVYKAKRKDGKDDRDYALKQIEGTGI-SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHI 89 (317)
T ss_pred CCCeEEEEEEEccCCCCceEEEEEECCCCC-cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccCC-CHHHH
Confidence 899999999864 35677777655432 3457789999999999999999999865 3457899999965 88887
Q ss_pred hccC-------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeee----cCCCCeEEccccccccCCCC---
Q 014484 76 LFHW-------ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILF----DKDGNPRLSSFGLMKNSRDG--- 141 (423)
Q Consensus 76 i~~~-------~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill----~~~~~~kl~Dfg~~~~~~~~--- 141 (423)
+... ....+++..+..++.||+.||.|||+++ |+||||||+|||+ +.++.+||+|||+++.....
T Consensus 90 ~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~-ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~ 168 (317)
T cd07868 90 IKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW-VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP 168 (317)
T ss_pred HHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC-EEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCcc
Confidence 7421 1235899999999999999999999999 9999999999999 45678999999999765432
Q ss_pred ----CccccCcccCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhh--------chhhhhcc------
Q 014484 142 ----KSYSTNLAFTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRS--------KNFLLLMD------ 202 (423)
Q Consensus 142 ----~~~~~t~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~--------~~~~~~~~------ 202 (423)
....+|+.|+|||++.+. .++.++||||+||++|+|++|.+||.......... ........
T Consensus 169 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (317)
T cd07868 169 LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKD 248 (317)
T ss_pred ccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHH
Confidence 234678999999998764 58999999999999999999998875321100000 00000000
Q ss_pred ---------------ccccCC------------CChhHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014484 203 ---------------SALEGH------------FSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (423)
Q Consensus 203 ---------------~~~~~~------------~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~ 241 (423)
...... .....+.++.++|.+||+.||.+|||++++++|
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~h 314 (317)
T cd07868 249 WEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD 314 (317)
T ss_pred hHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 000000 000113468899999999999999999999976
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-37 Score=282.89 Aligned_cols=233 Identities=15% Similarity=0.236 Sum_probs=189.4
Q ss_pred CCCCccceeee-ecceeeeeecCCCh-------hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHH
Q 014484 2 GGRCSKFSICW-FHCHLKSSVLESSD-------LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLA 73 (423)
Q Consensus 2 G~~g~v~~~~~-~~~~~~~~~~~~~~-------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 73 (423)
|+||.||++.. .+..+++|.+.... .....+.+|+++++.++|+||+++++++.+.+..++||||++|++|.
T Consensus 11 g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 90 (265)
T cd06631 11 GAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFMEFVPGGSIS 90 (265)
T ss_pred cCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEEecCCCCcHH
Confidence 89999999876 35666777654321 22356889999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCC----------CCc
Q 014484 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----------GKS 143 (423)
Q Consensus 74 ~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----------~~~ 143 (423)
+++.+ ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++..... ...
T Consensus 91 ~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~ 167 (265)
T cd06631 91 SILNR--FGPLPEPVFCKYTKQILDGVAYLHNNC-VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKS 167 (265)
T ss_pred HHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCcCHHhEEECCCCeEEeccchhhHhhhhccccccccccccc
Confidence 99964 346899999999999999999999999 99999999999999999999999998875421 123
Q ss_pred cccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhc-cccccCCCChhHHHHHHHHHH
Q 014484 144 YSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLM-DSALEGHFSNDEGTELVRLAS 222 (423)
Q Consensus 144 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~ 222 (423)
..++..|+|||.+.+..++.++|+|||||++++|++|..||...... . ...... ........+..++.++.++|.
T Consensus 168 ~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 243 (265)
T cd06631 168 MHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRL--A--AMFYIGAHRGLMPRLPDSFSAAAIDFVT 243 (265)
T ss_pred cCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChH--H--HHHHhhhccCCCCCCCCCCCHHHHHHHH
Confidence 45788999999999888999999999999999999999887642111 1 111111 111223345567788999999
Q ss_pred HhcccCcCCCCCHHHHHHH
Q 014484 223 RCLQSEARERPNAKSLVIS 241 (423)
Q Consensus 223 ~cl~~dp~~Rps~~~vl~~ 241 (423)
+||+.+|.+||++.+++.+
T Consensus 244 ~~l~~~p~~Rp~~~~~l~~ 262 (265)
T cd06631 244 SCLTRDQHERPSALQLLRH 262 (265)
T ss_pred HHhcCCcccCCCHHHHhcC
Confidence 9999999999999999875
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-37 Score=290.61 Aligned_cols=236 Identities=19% Similarity=0.204 Sum_probs=192.7
Q ss_pred CCCCccceeeee--cceeeeeecCCChh----hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDL----GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|++|.||.+... +..+++|.+..... ....+..|++++..++|+||+++++++..+...++||||+.|++|.++
T Consensus 12 g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 91 (316)
T cd05574 12 GDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMDYCPGGELFRL 91 (316)
T ss_pred CccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEEecCCCCHHHH
Confidence 899999999885 57777777755432 345688999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC--------------
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-------------- 141 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-------------- 141 (423)
+....+..+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 92 ~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~ 170 (316)
T cd05574 92 LQRQPGKCLSEEVARFYAAEVLLALEYLHLLG-IVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRR 170 (316)
T ss_pred HHhCCCCccCHHHHHHHHHHHHHHHHHHHHCC-eeccCCChHHeEEcCCCCEEEeecchhhccccccccccccccccccc
Confidence 87545567999999999999999999999999 999999999999999999999999987654321
Q ss_pred -------------------CccccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhcc
Q 014484 142 -------------------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD 202 (423)
Q Consensus 142 -------------------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~ 202 (423)
....|+..|+|||.+.+..++.++||||||+++|+|++|..||...... ..+.....
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~----~~~~~~~~ 246 (316)
T cd05574 171 SSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRD----ETFSNILK 246 (316)
T ss_pred ccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchH----HHHHHHhc
Confidence 1234678899999999888999999999999999999999988654221 11222222
Q ss_pred ccccCCCChhHHHHHHHHHHHhcccCcCCCCC----HHHHHHHH
Q 014484 203 SALEGHFSNDEGTELVRLASRCLQSEARERPN----AKSLVISL 242 (423)
Q Consensus 203 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps----~~~vl~~l 242 (423)
...........+.++.+++.+||..||++||| +++++.|-
T Consensus 247 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~ 290 (316)
T cd05574 247 KEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHP 290 (316)
T ss_pred CCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCc
Confidence 11111112225788999999999999999999 88888763
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-37 Score=284.89 Aligned_cols=235 Identities=16% Similarity=0.193 Sum_probs=188.9
Q ss_pred CCCCccceeeee--cceeeeeecCCCh-hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
|+||.||++... +..++++.+.... .....+.+|+.+++.++||||+++++++..++..++||||++|++|..++.+
T Consensus 23 g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~ 102 (292)
T cd06644 23 GAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLE 102 (292)
T ss_pred CCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecCCCCcHHHHHHh
Confidence 899999999874 5667777765443 3466788999999999999999999999999999999999999999888754
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccCCcc
Q 014484 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPPE 154 (423)
Q Consensus 79 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~aPE 154 (423)
....+++..+..++.|++.+|.|||+++ ++||||||+||+++.++.++|+|||++...... ....++..|+|||
T Consensus 103 -~~~~l~~~~~~~~~~ql~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE 180 (292)
T cd06644 103 -LDRGLTEPQIQVICRQMLEALQYLHSMK-IIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRDSFIGTPYWMAPE 180 (292)
T ss_pred -hcCCCCHHHHHHHHHHHHHHHHHHhcCC-eeecCCCcceEEEcCCCCEEEccCccceeccccccccceecCCccccCce
Confidence 2456899999999999999999999999 999999999999999999999999988654322 2345788999999
Q ss_pred ccc-----cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhcccc-ccCCCChhHHHHHHHHHHHhcccC
Q 014484 155 YMR-----TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSA-LEGHFSNDEGTELVRLASRCLQSE 228 (423)
Q Consensus 155 ~~~-----~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~d 228 (423)
.+. ...++.++|+|||||++|+|++|..|+...... .......... .....+..++.++.+++.+||..|
T Consensus 181 ~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 256 (292)
T cd06644 181 VVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM----RVLLKIAKSEPPTLSQPSKWSMEFRDFLKTALDKH 256 (292)
T ss_pred eeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHH----HHHHHHhcCCCccCCCCcccCHHHHHHHHHHhcCC
Confidence 885 344788999999999999999999887543211 1111111111 111223456778999999999999
Q ss_pred cCCCCCHHHHHHHH
Q 014484 229 ARERPNAKSLVISL 242 (423)
Q Consensus 229 p~~Rps~~~vl~~l 242 (423)
|++||++++++++-
T Consensus 257 p~~Rp~~~~il~~~ 270 (292)
T cd06644 257 PETRPSAAQLLEHP 270 (292)
T ss_pred cccCcCHHHHhcCc
Confidence 99999999998763
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-39 Score=324.94 Aligned_cols=233 Identities=17% Similarity=0.213 Sum_probs=193.3
Q ss_pred CCCCccceeeee--cceeeeeecCC---ChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLES---SDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
|-||.||.++.. |.-+++|-+.. .......+.+|..++..++|||+|+++|+-.+++..+|.||||.||+|.+.+
T Consensus 1246 G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~GsLa~ll 1325 (1509)
T KOG4645|consen 1246 GTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEGGSLASLL 1325 (1509)
T ss_pred cceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHhccCcHHHHH
Confidence 668999999985 55555554422 2233556789999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC--------ccccCc
Q 014484 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK--------SYSTNL 148 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--------~~~~t~ 148 (423)
.+ ++..++.....+..|++.|+.|||++| ||||||||+||+++.+|.+|++|||.|....... ...||+
T Consensus 1326 ~~--gri~dE~vt~vyt~qll~gla~LH~~g-IVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~ 1402 (1509)
T KOG4645|consen 1326 EH--GRIEDEMVTRVYTKQLLEGLAYLHEHG-IVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGELQSMMGTP 1402 (1509)
T ss_pred Hh--cchhhhhHHHHHHHHHHHHHHHHHhcC-ceecCCCccceeeecCCcEEeecccceeEecCchhcCCHHHHhhcCCc
Confidence 64 445677777888999999999999999 9999999999999999999999999998776543 346899
Q ss_pred ccCCccccccCC---CCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhc
Q 014484 149 AFTPPEYMRTGR---VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCL 225 (423)
Q Consensus 149 ~y~aPE~~~~~~---~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 225 (423)
.|||||++.+.+ -..++||||||||+.||+||+.||..--.. -.+.--+.....+.+|..++++-.+||++||
T Consensus 1403 ~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne----~aIMy~V~~gh~Pq~P~~ls~~g~dFle~Cl 1478 (1509)
T KOG4645|consen 1403 MYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNE----WAIMYHVAAGHKPQIPERLSSEGRDFLEHCL 1478 (1509)
T ss_pred hhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccch----hHHHhHHhccCCCCCchhhhHhHHHHHHHHH
Confidence 999999998654 566899999999999999999998653111 1122223334556678889999999999999
Q ss_pred ccCcCCCCCHHHHHHH
Q 014484 226 QSEARERPNAKSLVIS 241 (423)
Q Consensus 226 ~~dp~~Rps~~~vl~~ 241 (423)
..||..|.++.+++.|
T Consensus 1479 ~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1479 EQDPKMRWTASQLLEH 1494 (1509)
T ss_pred hcCchhhhHHHHHHHh
Confidence 9999999999999877
|
|
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-37 Score=292.50 Aligned_cols=235 Identities=16% Similarity=0.159 Sum_probs=186.8
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.+. +..+++|++.+.. .....+.+|+.++..++|+||+.+++++.+.+..++||||++||+|.++
T Consensus 12 G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ey~~~g~L~~~ 91 (332)
T cd05623 12 GAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMDYYVGGDLLTL 91 (332)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEeccCCCcHHHH
Confidence 899999999875 4567777764322 2234578899999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-----CccccCccc
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYSTNLAF 150 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~~t~~y 150 (423)
+.+ ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.++|+|||++...... ....||+.|
T Consensus 92 l~~-~~~~l~~~~~~~~~~qi~~al~~lH~~~-iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y 169 (332)
T cd05623 92 LSK-FEDRLPEDMARFYLAEMVIAIDSVHQLH-YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDY 169 (332)
T ss_pred HHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHEEECCCCCEEEeecchheecccCCcceecccccCccc
Confidence 964 2356899999999999999999999999 999999999999999999999999998754322 224689999
Q ss_pred CCccccc-----cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCC---ChhHHHHHHHHHH
Q 014484 151 TPPEYMR-----TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHF---SNDEGTELVRLAS 222 (423)
Q Consensus 151 ~aPE~~~-----~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~ 222 (423)
+|||++. ...++.++|||||||++|||++|..||........ ...+........+ ...+++++.+++.
T Consensus 170 ~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~----~~~i~~~~~~~~~p~~~~~~s~~~~~li~ 245 (332)
T cd05623 170 ISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVET----YGKIMNHKERFQFPAQVTDVSEDAKDLIR 245 (332)
T ss_pred cCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHH----HHHHhCCCccccCCCccccCCHHHHHHHH
Confidence 9999886 34588999999999999999999999875422111 1111111111112 2346788999999
Q ss_pred HhcccCcCC--CCCHHHHHHHH
Q 014484 223 RCLQSEARE--RPNAKSLVISL 242 (423)
Q Consensus 223 ~cl~~dp~~--Rps~~~vl~~l 242 (423)
+||..++.+ |++++++++|-
T Consensus 246 ~ll~~~~~r~~r~~~~~~~~h~ 267 (332)
T cd05623 246 RLICSREHRLGQNGIEDFKQHP 267 (332)
T ss_pred HHccChhhhcCCCCHHHHhCCC
Confidence 999765544 68999999884
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-37 Score=314.44 Aligned_cols=236 Identities=17% Similarity=0.201 Sum_probs=183.6
Q ss_pred CCCCccceeeee--cceeeeeecCC---ChhhHHHHHHHHHHHhcCCCCCccceEeEEEeC--CceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLES---SDLGETLNLEEAKAVGNLRSERLANLIGCCYEA--DERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||.+.+. +..++++++.. .......+..|+.++.+|+|||||+++++|... ..+||||||+++++|.+
T Consensus 24 GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyIVMEY~~gGSL~~ 103 (1021)
T PTZ00266 24 GRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYILMEFCDAGDLSR 103 (1021)
T ss_pred CCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEEEEeCCCCCcHHH
Confidence 899999999885 44566666543 233456788999999999999999999998654 45899999999999999
Q ss_pred hhccC--CCCCCCHHHHHHHHHHHHHHHHHHHc-------CCCeeeccCCCCCeeecC-----------------CCCeE
Q 014484 75 HLFHW--ETQPMKWAMRLRVALYLAQALEYCSS-------KGRALYHDLNAYRILFDK-----------------DGNPR 128 (423)
Q Consensus 75 ~i~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~-------~~~iiH~dlkp~Nill~~-----------------~~~~k 128 (423)
+|... ....+++..++.|+.||+.||.|||+ ++ ||||||||+||||+. .+.+|
T Consensus 104 lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~-IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVK 182 (1021)
T PTZ00266 104 NIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGER-VLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAK 182 (1021)
T ss_pred HHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCC-ceeccCcHHHeEeecCccccccccccccccCCCCceE
Confidence 98632 23569999999999999999999998 45 999999999999964 23489
Q ss_pred EccccccccCCCC---CccccCcccCCcccccc--CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccc
Q 014484 129 LSSFGLMKNSRDG---KSYSTNLAFTPPEYMRT--GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 203 (423)
Q Consensus 129 l~Dfg~~~~~~~~---~~~~~t~~y~aPE~~~~--~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~ 203 (423)
|+|||++...... ....||+.|+|||++.+ ..++.++||||||||+|+|++|..||...... ..+...+..
T Consensus 183 LsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~----~qli~~lk~ 258 (1021)
T PTZ00266 183 IGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNF----SQLISELKR 258 (1021)
T ss_pred EccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcH----HHHHHHHhc
Confidence 9999999865433 33568999999999864 34889999999999999999999988643111 111111111
Q ss_pred cccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 204 ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 204 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
.. .......+.++.+||.+||+.+|.+|||+.+++.+-.
T Consensus 259 ~p-~lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ 297 (1021)
T PTZ00266 259 GP-DLPIKGKSKELNILIKNLLNLSAKERPSALQCLGYQI 297 (1021)
T ss_pred CC-CCCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHH
Confidence 11 1111234678999999999999999999999997643
|
|
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-37 Score=292.38 Aligned_cols=235 Identities=16% Similarity=0.158 Sum_probs=187.5
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.+. +..+++|++.... .....+.+|+.++..++|+||+++++++.+++..|+||||++||+|.++
T Consensus 12 G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~Ey~~gg~L~~~ 91 (331)
T cd05624 12 GAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMDYYVGGDLLTL 91 (331)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCCCcHHHH
Confidence 899999999874 5667888765422 2344577899999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC-----ccccCccc
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-----SYSTNLAF 150 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-----~~~~t~~y 150 (423)
+.+ ....+++..+..++.|++.||+|||+++ |+||||||+|||++.++.++|+|||+++...... ...||+.|
T Consensus 92 l~~-~~~~l~~~~~~~~~~qi~~~L~~lH~~~-iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y 169 (331)
T cd05624 92 LSK-FEDRLPEDMARFYIAEMVLAIHSIHQLH-YVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQSSVAVGTPDY 169 (331)
T ss_pred HHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCchHHEEEcCCCCEEEEeccceeeccCCCceeeccccCCccc
Confidence 964 2356899999999999999999999999 9999999999999999999999999987654322 24689999
Q ss_pred CCcccccc-----CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCC---hhHHHHHHHHHH
Q 014484 151 TPPEYMRT-----GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFS---NDEGTELVRLAS 222 (423)
Q Consensus 151 ~aPE~~~~-----~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~li~ 222 (423)
+|||++.+ +.++.++|||||||++|+|++|..||........ ............++ ..+++++.+++.
T Consensus 170 ~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~----~~~i~~~~~~~~~p~~~~~~~~~~~~li~ 245 (331)
T cd05624 170 ISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVET----YGKIMNHEERFQFPSHITDVSEEAKDLIQ 245 (331)
T ss_pred CCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHH----HHHHHcCCCcccCCCccccCCHHHHHHHH
Confidence 99998875 4678899999999999999999999865422111 11111111111122 235788999999
Q ss_pred HhcccCcCC--CCCHHHHHHHH
Q 014484 223 RCLQSEARE--RPNAKSLVISL 242 (423)
Q Consensus 223 ~cl~~dp~~--Rps~~~vl~~l 242 (423)
+||..++++ |++++++++|.
T Consensus 246 ~ll~~~~~~~~~~~~~~~~~h~ 267 (331)
T cd05624 246 RLICSRERRLGQNGIEDFKKHA 267 (331)
T ss_pred HHccCchhhcCCCCHHHHhcCC
Confidence 999876654 46899998874
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-37 Score=284.56 Aligned_cols=240 Identities=15% Similarity=0.233 Sum_probs=192.8
Q ss_pred CCCCccceeeee--cceeeeeecCC--ChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLES--SDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~ 77 (423)
|+||.||.+.+. +..+++|.+.. .......+.+|+.++.+++||||+++++++..++..++||||++|++|..++.
T Consensus 12 g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~ 91 (286)
T cd06622 12 GNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYMDAGSLDKLYA 91 (286)
T ss_pred cCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeecCCCCHHHHHH
Confidence 899999999885 66777776643 23345678899999999999999999999999999999999999999999885
Q ss_pred cCC-CCCCCHHHHHHHHHHHHHHHHHHHcC-CCeeeccCCCCCeeecCCCCeEEccccccccCCCC--CccccCcccCCc
Q 014484 78 HWE-TQPMKWAMRLRVALYLAQALEYCSSK-GRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTNLAFTPP 153 (423)
Q Consensus 78 ~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~-~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--~~~~~t~~y~aP 153 (423)
... ...+++..+..++.|++.||.|||++ + ++|+||||+||+++.++.++|+|||++...... ....++..|+||
T Consensus 92 ~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aP 170 (286)
T cd06622 92 GGVATEGIPEDVLRRITYAVVKGLKFLKEEHN-IIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAKTNIGCQSYMAP 170 (286)
T ss_pred hccccCCCCHHHHHHHHHHHHHHHHHHHhcCC-EeeCCCCHHHEEECCCCCEEEeecCCcccccCCccccCCCccCccCc
Confidence 421 23789999999999999999999974 7 999999999999999999999999998765432 334577899999
Q ss_pred cccccCC------CCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhccc
Q 014484 154 EYMRTGR------VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQS 227 (423)
Q Consensus 154 E~~~~~~------~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 227 (423)
|.+.+.. ++.++|+|||||++|+|++|..||......... ....... .......+..++.++.+++.+||+.
T Consensus 171 E~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~ 248 (286)
T cd06622 171 ERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIF-AQLSAIV-DGDPPTLPSGYSDDAQDFVAKCLNK 248 (286)
T ss_pred chhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHH-HHHHHHh-hcCCCCCCcccCHHHHHHHHHHccc
Confidence 9886543 588999999999999999999988653221111 1111111 1223345556788999999999999
Q ss_pred CcCCCCCHHHHHHHHHh
Q 014484 228 EARERPNAKSLVISLMS 244 (423)
Q Consensus 228 dp~~Rps~~~vl~~l~~ 244 (423)
+|+.||++++++.+.+-
T Consensus 249 ~p~~Rp~~~~l~~~~~~ 265 (286)
T cd06622 249 IPNRRPTYAQLLEHPWL 265 (286)
T ss_pred CcccCCCHHHHhcChhh
Confidence 99999999999987553
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-37 Score=281.08 Aligned_cols=238 Identities=16% Similarity=0.180 Sum_probs=196.0
Q ss_pred CCCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 1 MGGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 1 ~G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
.|++|.||.+... +..+++|++.... ...+.+.+|+++++.++||||+++++++.++...++||||+++++|.+
T Consensus 3 ~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 82 (262)
T cd05572 3 VGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGELWT 82 (262)
T ss_pred CCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcHHH
Confidence 3899999999986 6778878775432 335678899999999999999999999999999999999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC---CccccCcccC
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFT 151 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~~t~~y~ 151 (423)
++.+ ...+++..+..++.|++.||.|||+++ ++|+||+|+||+++.++.++|+|||++...... ....++..|+
T Consensus 83 ~l~~--~~~l~~~~~~~~~~~i~~~l~~lH~~~-~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~ 159 (262)
T cd05572 83 ILRD--RGLFDEYTARFYIACVVLAFEYLHNRG-IIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFCGTPEYV 159 (262)
T ss_pred HHhh--cCCCCHHHHHHHHHHHHHHHHHHhhCC-cccCCCCHHHEEEcCCCCEEEeeCCcccccCcccccccccCCcCcc
Confidence 9954 346899999999999999999999999 999999999999999999999999998866543 2345788999
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCC
Q 014484 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARE 231 (423)
Q Consensus 152 aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (423)
+||.+.+..++.++|+||+|+++|+|++|..|+....... ...............++...+.++.+++.+||+.||++
T Consensus 160 ~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~ 237 (262)
T cd05572 160 APEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP--MEIYNDILKGNGKLEFPNYIDKAAKDLIKQLLRRNPEE 237 (262)
T ss_pred ChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH--HHHHHHHhccCCCCCCCcccCHHHHHHHHHHccCChhh
Confidence 9999988889999999999999999999998886542111 11111222122233445555788999999999999999
Q ss_pred CCC-----HHHHHHHHH
Q 014484 232 RPN-----AKSLVISLM 243 (423)
Q Consensus 232 Rps-----~~~vl~~l~ 243 (423)
||+ ++++++|-.
T Consensus 238 R~~~~~~~~~~l~~~~~ 254 (262)
T cd05572 238 RLGNLKGGIKDIKKHKW 254 (262)
T ss_pred CcCCcccCHHHHhcChh
Confidence 999 888887643
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-37 Score=279.30 Aligned_cols=234 Identities=18% Similarity=0.183 Sum_probs=191.3
Q ss_pred CCCCccceeeee--cceeeeeecCCC---hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
|+||.||.+... +..+++|.+... ......+.+|+++++.++||||+++++.+..++..++||||+++++|.+++
T Consensus 11 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~ 90 (256)
T cd08220 11 GAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYAPGGTLAEYI 90 (256)
T ss_pred cCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecCCCCCHHHHH
Confidence 889999998874 555666666443 234567889999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCC-CeEEccccccccCCCCC---ccccCcccCC
Q 014484 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG-NPRLSSFGLMKNSRDGK---SYSTNLAFTP 152 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~-~~kl~Dfg~~~~~~~~~---~~~~t~~y~a 152 (423)
....+..+++..+..++.|++.+|.|||+++ ++|+||+|+||+++.++ .++|+|||++....... ...++..|+|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~-i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~y~a 169 (256)
T cd08220 91 QKRCNSLLDEDTILHFFVQILLALHHVHTKL-ILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAYTVVGTPCYIS 169 (256)
T ss_pred HHhcccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEEccCCCceecCCCccccccccCCcccC
Confidence 7544556899999999999999999999999 99999999999998654 57999999988665432 3457889999
Q ss_pred ccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCC
Q 014484 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (423)
Q Consensus 153 PE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (423)
||.+.+..++.++|+||||+++++|++|..|+......... .... .......+...+.++.+++.+||+.||++|
T Consensus 170 PE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~p~~R 244 (256)
T cd08220 170 PELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALV----LKIM-SGTFAPISDRYSPDLRQLILSMLNLDPSKR 244 (256)
T ss_pred chhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHH----HHHH-hcCCCCCCCCcCHHHHHHHHHHccCChhhC
Confidence 99999888999999999999999999999887653221111 1111 112223444567889999999999999999
Q ss_pred CCHHHHHHH
Q 014484 233 PNAKSLVIS 241 (423)
Q Consensus 233 ps~~~vl~~ 241 (423)
||+.+++.+
T Consensus 245 pt~~~ll~~ 253 (256)
T cd08220 245 PQLSQIMAQ 253 (256)
T ss_pred CCHHHHhhC
Confidence 999999976
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-37 Score=283.41 Aligned_cols=240 Identities=17% Similarity=0.247 Sum_probs=193.6
Q ss_pred CCCCccceeeee--cceeeeeecCCC--hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~ 77 (423)
|++|.||++.+. +..+++|.+... ......+.+|+++++.++||||+++++++..++..+++|||+.+++|.+++.
T Consensus 12 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~ 91 (265)
T cd06605 12 GNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMDGGSLDKILK 91 (265)
T ss_pred CCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEecCCCcHHHHHH
Confidence 899999999886 666777776554 2345678899999999999999999999999999999999999999999996
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHc-CCCeeeccCCCCCeeecCCCCeEEccccccccCCCC--CccccCcccCCcc
Q 014484 78 HWETQPMKWAMRLRVALYLAQALEYCSS-KGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTNLAFTPPE 154 (423)
Q Consensus 78 ~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--~~~~~t~~y~aPE 154 (423)
.. ...+++..+..++.|++.||.|||+ .+ ++|+||||+||+++.++.++|+|||.+...... ....++..|+|||
T Consensus 92 ~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~~-i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~y~~PE 169 (265)
T cd06605 92 EV-QGRIPERILGKIAVAVLKGLTYLHEKHK-IIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTFVGTSSYMAPE 169 (265)
T ss_pred Hc-cCCCCHHHHHHHHHHHHHHHHHHcCCCC-eecCCCCHHHEEECCCCCEEEeecccchhhHHHHhhcccCChhccCHH
Confidence 42 2678999999999999999999999 88 999999999999999999999999998755432 2256788999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChh-HHHHHHHHHHHhcccCcCCCC
Q 014484 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND-EGTELVRLASRCLQSEARERP 233 (423)
Q Consensus 155 ~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~~cl~~dp~~Rp 233 (423)
.+.+..++.++|+|||||++++|++|..|+.........................+.. ++.++.++|.+||..||.+||
T Consensus 170 ~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 249 (265)
T cd06605 170 RIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSPDFQDFVNLCLIKDPRERP 249 (265)
T ss_pred HHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHcCCCchhCc
Confidence 9998889999999999999999999998876531100000011111111112223333 678899999999999999999
Q ss_pred CHHHHHHHHH
Q 014484 234 NAKSLVISLM 243 (423)
Q Consensus 234 s~~~vl~~l~ 243 (423)
|+.+++.+-.
T Consensus 250 t~~~ll~~~~ 259 (265)
T cd06605 250 SYKELLEHPF 259 (265)
T ss_pred CHHHHhhCch
Confidence 9999997743
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-38 Score=285.25 Aligned_cols=237 Identities=22% Similarity=0.360 Sum_probs=190.5
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHHH---HHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETL---NLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~---~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
|+||.||++... +..+++|++......... ..+|+.++..++||||+++++++......++|||++.+++|.+++
T Consensus 10 G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~~~~~L~~~l 89 (260)
T PF00069_consen 10 GGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYCPGGSLQDYL 89 (260)
T ss_dssp ESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEETTEBHHHHH
T ss_pred CCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccccccccccccccccccccccc
Confidence 899999999996 446888888777654333 346999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCC----CCCccccCcccCC
Q 014484 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSR----DGKSYSTNLAFTP 152 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~----~~~~~~~t~~y~a 152 (423)
. ..+.+++..+..++.|++.||.+||+++ ++|+||||+||+++.++.++|+|||++.... ......++..|+|
T Consensus 90 ~--~~~~~~~~~~~~~~~qi~~~L~~Lh~~~-i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~a 166 (260)
T PF00069_consen 90 Q--KNKPLSEEEILKIAYQILEALAYLHSKG-IVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFNPFVGTPEYMA 166 (260)
T ss_dssp H--HHSSBBHHHHHHHHHHHHHHHHHHHHTT-EEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSSSSSSGGGSC
T ss_pred c--cccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 6 3567899999999999999999999999 9999999999999999999999999987531 2234567889999
Q ss_pred ccccc-cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccc--cCCCChhHHHHHHHHHHHhcccCc
Q 014484 153 PEYMR-TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSAL--EGHFSNDEGTELVRLASRCLQSEA 229 (423)
Q Consensus 153 PE~~~-~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~cl~~dp 229 (423)
||++. +..++.++||||||+++++|++|..|+......... ........... ........+..+.+++.+||+.||
T Consensus 167 PE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p 245 (260)
T PF00069_consen 167 PEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQL-EIIEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDP 245 (260)
T ss_dssp HHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHH-HHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSG
T ss_pred cccccccccccccccccccccccccccccccccccccchhhh-hhhhhcccccccccccccchhHHHHHHHHHHHccCCh
Confidence 99998 788999999999999999999999887764111000 01111111000 001111124789999999999999
Q ss_pred CCCCCHHHHHHHH
Q 014484 230 RERPNAKSLVISL 242 (423)
Q Consensus 230 ~~Rps~~~vl~~l 242 (423)
++|||+.++++|.
T Consensus 246 ~~R~~~~~l~~~~ 258 (260)
T PF00069_consen 246 EQRPSAEELLKHP 258 (260)
T ss_dssp GGSTTHHHHHTSG
T ss_pred hHCcCHHHHhcCC
Confidence 9999999998763
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-37 Score=281.02 Aligned_cols=235 Identities=15% Similarity=0.207 Sum_probs=188.0
Q ss_pred CCCCccceeeee--cceeeeeecCCCh-hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
|+||.||++.+. +..++++.+.... .....+.+|+.+++.++|+||+++++++..++..++||||+++++|.+++..
T Consensus 19 g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 98 (268)
T cd06624 19 GTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGSLSALLRS 98 (268)
T ss_pred CCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCCCCHHHHHHH
Confidence 899999999875 4557777655443 3456788999999999999999999999999999999999999999999964
Q ss_pred CCCCCC--CHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecC-CCCeEEccccccccCCCC----CccccCcccC
Q 014484 79 WETQPM--KWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK-DGNPRLSSFGLMKNSRDG----KSYSTNLAFT 151 (423)
Q Consensus 79 ~~~~~~--~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~-~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~ 151 (423)
. ...+ ++..+..++.|++.||.|||+++ ++||||||+||+++. ++.++|+|||++...... ....++..|+
T Consensus 99 ~-~~~~~~~~~~~~~~~~qi~~al~~lH~~~-i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~ 176 (268)
T cd06624 99 K-WGPLKDNEQTIIFYTKQILEGLKYLHDNQ-IVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCTETFTGTLQYM 176 (268)
T ss_pred h-cccCCCcHHHHHHHHHHHHHHHHHHHHCC-EeecCCCHHHEEEcCCCCeEEEecchhheecccCCCccccCCCCcccc
Confidence 2 2345 78889999999999999999999 999999999999976 678999999998754322 2345788999
Q ss_pred CccccccCC--CCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCc
Q 014484 152 PPEYMRTGR--VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEA 229 (423)
Q Consensus 152 aPE~~~~~~--~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 229 (423)
|||.+.+.. ++.++|+||||+++|+|++|..|+........ .............++...++++.+++.+||+.+|
T Consensus 177 aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p 253 (268)
T cd06624 177 APEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQA---AMFKVGMFKIHPEIPESLSAEAKNFILRCFEPDP 253 (268)
T ss_pred ChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhh---hHhhhhhhccCCCCCcccCHHHHHHHHHHcCCCc
Confidence 999986543 78899999999999999999988754211111 0111111112233455677889999999999999
Q ss_pred CCCCCHHHHHHH
Q 014484 230 RERPNAKSLVIS 241 (423)
Q Consensus 230 ~~Rps~~~vl~~ 241 (423)
.+|||+.+++.|
T Consensus 254 ~~Rpt~~~ll~~ 265 (268)
T cd06624 254 DKRASAHDLLQD 265 (268)
T ss_pred hhCCCHHHHHhC
Confidence 999999999876
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-37 Score=279.86 Aligned_cols=232 Identities=17% Similarity=0.197 Sum_probs=186.9
Q ss_pred CCCCccceeeee--cceeeeeecCCC------hhhHHHHHHHHHHHhcCCCCCccceEeEEEeC--CceeEEEecCCCCC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS------DLGETLNLEEAKAVGNLRSERLANLIGCCYEA--DERLLVAEFMPNET 71 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e~~~~~~ 71 (423)
|+||.||.+.+. +..+++|.+... ......+.+|+.+++.++||||+++++++.+. ..+++||||++|++
T Consensus 13 g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~ 92 (265)
T cd06652 13 GAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLSIFMEHMPGGS 92 (265)
T ss_pred CCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEEEEEEecCCCc
Confidence 899999999874 566777765321 12345788899999999999999999998764 45789999999999
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCC-------CCcc
Q 014484 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD-------GKSY 144 (423)
Q Consensus 72 L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~-------~~~~ 144 (423)
|.+++.+ ...+++..+..++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||++..... ....
T Consensus 93 L~~~l~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~ 169 (265)
T cd06652 93 IKDQLKS--YGALTENVTRKYTRQILEGVSYLHSNM-IVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSV 169 (265)
T ss_pred HHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEecCCCCEEECcCccccccccccccccccccC
Confidence 9999854 345889999999999999999999999 99999999999999999999999999875432 1234
Q ss_pred ccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHh
Q 014484 145 STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRC 224 (423)
Q Consensus 145 ~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 224 (423)
.++..|+|||.+.+..++.++|+|||||++|+|++|..||...... ...............+...+..+.+++.+|
T Consensus 170 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 245 (265)
T cd06652 170 TGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAM----AAIFKIATQPTNPVLPPHVSDHCRDFLKRI 245 (265)
T ss_pred CCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchH----HHHHHHhcCCCCCCCchhhCHHHHHHHHHH
Confidence 5788999999998888999999999999999999999887643111 111222222223334556677899999999
Q ss_pred cccCcCCCCCHHHHHHH
Q 014484 225 LQSEARERPNAKSLVIS 241 (423)
Q Consensus 225 l~~dp~~Rps~~~vl~~ 241 (423)
|. +|++||++++++.+
T Consensus 246 l~-~p~~Rp~~~~il~~ 261 (265)
T cd06652 246 FV-EAKLRPSADELLRH 261 (265)
T ss_pred hc-ChhhCCCHHHHhcC
Confidence 94 99999999999876
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-37 Score=283.96 Aligned_cols=241 Identities=18% Similarity=0.278 Sum_probs=193.4
Q ss_pred CCCCccceeeee--cceeeeeecCCC--hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~ 77 (423)
|+||.||.+.+. +..+++|++... ......+.+|++++..++||||+++++++...+..++||||+++++|.+++.
T Consensus 16 g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~ 95 (284)
T cd06620 16 GNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEFMDCGSLDRIYK 95 (284)
T ss_pred CCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEecCCCCCHHHHHH
Confidence 899999999886 666777765433 2345678899999999999999999999999999999999999999999885
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHc-CCCeeeccCCCCCeeecCCCCeEEccccccccCCCC--CccccCcccCCcc
Q 014484 78 HWETQPMKWAMRLRVALYLAQALEYCSS-KGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTNLAFTPPE 154 (423)
Q Consensus 78 ~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--~~~~~t~~y~aPE 154 (423)
+ .+.+++..+..++.+++.||.|||+ .+ ++||||+|+||++++++.++|+|||++...... ....++..|+|||
T Consensus 96 ~--~~~~~~~~~~~~~~~i~~~l~~LH~~~~-i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~~~~~~~~~~~aPE 172 (284)
T cd06620 96 K--GGPIPVEILGKIAVAVVEGLTYLYNVHR-IMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIADTFVGTSTYMSPE 172 (284)
T ss_pred h--ccCCCHHHHHHHHHHHHHHHHHHHHhcC-eeccCCCHHHEEECCCCcEEEccCCcccchhhhccCccccCcccCCHH
Confidence 4 4568999999999999999999997 57 999999999999999999999999998654322 2346889999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHH---hhh----chhhhhccccccCCCCh-hHHHHHHHHHHHhcc
Q 014484 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDL---IRS----KNFLLLMDSALEGHFSN-DEGTELVRLASRCLQ 226 (423)
Q Consensus 155 ~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~---~~~----~~~~~~~~~~~~~~~~~-~~~~~l~~li~~cl~ 226 (423)
.+.+..++.++|+|||||++|+|++|..||....... ... .......... ...++. ..+.++.+++.+||+
T Consensus 173 ~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~ 251 (284)
T cd06620 173 RIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEP-PPRLPSSDFPEDLRDFVDACLL 251 (284)
T ss_pred HHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhcc-CCCCCchhcCHHHHHHHHHHhc
Confidence 9988889999999999999999999999886532210 000 0111111111 112222 366789999999999
Q ss_pred cCcCCCCCHHHHHHHHHhhh
Q 014484 227 SEARERPNAKSLVISLMSLQ 246 (423)
Q Consensus 227 ~dp~~Rps~~~vl~~l~~~~ 246 (423)
.||++|||+.+++++...+.
T Consensus 252 ~dp~~Rpt~~e~~~~~~~~~ 271 (284)
T cd06620 252 KDPTERPTPQQLCAMPPFIQ 271 (284)
T ss_pred CCcccCcCHHHHhcCccccc
Confidence 99999999999998865443
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-37 Score=278.82 Aligned_cols=234 Identities=15% Similarity=0.192 Sum_probs=192.8
Q ss_pred CCCCccceeeee--cceeeeeecCCC---hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
|+||.+|.+... +..++++.+... ......+.+|+.+++.++||||+++++++...+..++||||+++++|.+++
T Consensus 11 g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~ 90 (256)
T cd08218 11 GSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYCEGGDLYKKI 90 (256)
T ss_pred CCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecCCCCcHHHHH
Confidence 889999988774 566777766432 334567889999999999999999999999999999999999999999998
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC----ccccCcccCC
Q 014484 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK----SYSTNLAFTP 152 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~----~~~~t~~y~a 152 (423)
.......+++.++..++.|++.||.|||+++ ++|+||+|+||+++.++.++|+|||++....... ...+++.|+|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (256)
T cd08218 91 NAQRGVLFPEDQILDWFVQICLALKHVHDRK-ILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELARTCIGTPYYLS 169 (256)
T ss_pred HhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhhhhccCCccccC
Confidence 6544456899999999999999999999999 9999999999999999999999999987654432 2457888999
Q ss_pred ccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCC
Q 014484 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (423)
Q Consensus 153 PE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (423)
||.+.+...+.++|+|||||++++|++|..|+........ ...... ......+...+.++.++|.+||+.+|.+|
T Consensus 170 pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~R 244 (256)
T cd08218 170 PEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNL----VLKIIR-GSYPPVSSHYSYDLRNLVSQLFKRNPRDR 244 (256)
T ss_pred HHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHH----HHHHhc-CCCCCCcccCCHHHHHHHHHHhhCChhhC
Confidence 9999888899999999999999999999988764321111 111111 11223345567889999999999999999
Q ss_pred CCHHHHHHH
Q 014484 233 PNAKSLVIS 241 (423)
Q Consensus 233 ps~~~vl~~ 241 (423)
|++.+++.|
T Consensus 245 p~~~~vl~~ 253 (256)
T cd08218 245 PSVNSILEK 253 (256)
T ss_pred cCHHHHhhC
Confidence 999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-37 Score=293.87 Aligned_cols=237 Identities=19% Similarity=0.237 Sum_probs=183.7
Q ss_pred CCCCccceeeee--cceeeeeecCCCh---hhHHHHHHHHHHHhcCCCCCccceEeEEEeC------CceeEEEecCCCC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEA------DERLLVAEFMPNE 70 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~~~~lv~e~~~~~ 70 (423)
|+||.||.+.+. +..+++|.+.... .....+.+|+++++.++||||+++++++... ...|++|+++ ++
T Consensus 26 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 104 (343)
T cd07878 26 GAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNEVYLVTNLM-GA 104 (343)
T ss_pred CCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCcEEEEeecC-CC
Confidence 899999999874 5667888775543 2345677899999999999999999988643 3468999998 77
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-CccccCcc
Q 014484 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSYSTNLA 149 (423)
Q Consensus 71 ~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~~t~~ 149 (423)
+|.+++. .+.+++..+..++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....+|+.
T Consensus 105 ~l~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~t~~ 180 (343)
T cd07878 105 DLNNIVK---CQKLSDEHVQFLIYQLLRGLKYIHSAG-IIHRDLKPSNVAVNEDCELRILDFGLARQADDEMTGYVATRW 180 (343)
T ss_pred CHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecccCChhhEEECCCCCEEEcCCccceecCCCcCCcccccc
Confidence 9998874 356999999999999999999999999 999999999999999999999999999866543 34568999
Q ss_pred cCCcccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchh----------hhhcccc-------ccCCCC-
Q 014484 150 FTPPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNF----------LLLMDSA-------LEGHFS- 210 (423)
Q Consensus 150 y~aPE~~~~-~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~----------~~~~~~~-------~~~~~~- 210 (423)
|+|||++.+ ..++.++|||||||++|+|++|..||............. ...+... .....+
T Consensus 181 y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (343)
T cd07878 181 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQ 260 (343)
T ss_pred ccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccc
Confidence 999999876 468999999999999999999998886532111000000 0000000 000000
Q ss_pred -------hhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 211 -------NDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 211 -------~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
...++.+.+++.+||+.||.+|||+.+++.|-.
T Consensus 261 ~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~ 300 (343)
T cd07878 261 QDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPY 300 (343)
T ss_pred hhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcc
Confidence 123456889999999999999999999998854
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-37 Score=282.87 Aligned_cols=236 Identities=14% Similarity=0.209 Sum_probs=190.7
Q ss_pred CCCCccceeeee--cceeeeeecCCCh-hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
|+||.||.+.+. +..+++|+..... ...+.+..|+++++.++||||+++++++..+...++||||+++++|.+++.+
T Consensus 16 g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~ 95 (280)
T cd06611 16 GAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFCDGGALDSIMLE 95 (280)
T ss_pred CCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeeccCCCcHHHHHHH
Confidence 899999999884 5667777765443 3456788999999999999999999999999999999999999999999864
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccCCcc
Q 014484 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPPE 154 (423)
Q Consensus 79 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~aPE 154 (423)
.+..+++..+..++.|++.||.|||+++ ++|+||+|+||+++.++.++|+|||++...... ....++..|+|||
T Consensus 96 -~~~~l~~~~~~~~~~ql~~~l~~lh~~~-i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE 173 (280)
T cd06611 96 -LERGLTEPQIRYVCRQMLEALNFLHSHK-VIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRDTFIGTPYWMAPE 173 (280)
T ss_pred -hcCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChhhEEECCCCCEEEccCccchhhcccccccceeecchhhcCHH
Confidence 3456999999999999999999999999 999999999999999999999999987654432 2345788999999
Q ss_pred ccc-----cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhcccc-ccCCCChhHHHHHHHHHHHhcccC
Q 014484 155 YMR-----TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSA-LEGHFSNDEGTELVRLASRCLQSE 228 (423)
Q Consensus 155 ~~~-----~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~d 228 (423)
.+. +..++.++|+|||||++|+|++|..||...... .......... .....+..++.++.+++.+||+.|
T Consensus 174 ~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 249 (280)
T cd06611 174 VVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPM----RVLLKILKSEPPTLDQPSKWSSSFNDFLKSCLVKD 249 (280)
T ss_pred HHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHH----HHHHHHhcCCCCCcCCcccCCHHHHHHHHHHhccC
Confidence 875 344788999999999999999999887643111 1111111110 111123346778999999999999
Q ss_pred cCCCCCHHHHHHHHH
Q 014484 229 ARERPNAKSLVISLM 243 (423)
Q Consensus 229 p~~Rps~~~vl~~l~ 243 (423)
|.+|||+.+++++-.
T Consensus 250 p~~Rps~~~il~~~~ 264 (280)
T cd06611 250 PDDRPTAAELLKHPF 264 (280)
T ss_pred hhhCcCHHHHhcChh
Confidence 999999999998843
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-37 Score=281.42 Aligned_cols=237 Identities=17% Similarity=0.205 Sum_probs=188.0
Q ss_pred CCCCccceeeee--cceeeeeecCCChh-----------hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDL-----------GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMP 68 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~-----------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 68 (423)
|+||.||.+... +..+++|.+..... ..+.+..|+.++..++||||+++++++...+..++||||++
T Consensus 12 g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 91 (272)
T cd06629 12 GTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEYLSIFLEYVP 91 (272)
T ss_pred cCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCceEEEEecCC
Confidence 899999999864 56677776542211 13467789999999999999999999999999999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC------C
Q 014484 69 NETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------K 142 (423)
Q Consensus 69 ~~~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~------~ 142 (423)
+++|.+++.+ ...+++..+..++.|++.||.|||+++ ++||||+|+||+++.++.++|+|||+++..... .
T Consensus 92 ~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~ 168 (272)
T cd06629 92 GGSIGSCLRT--YGRFEEQLVRFFTEQVLEGLAYLHSKG-ILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNM 168 (272)
T ss_pred CCcHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHhhCC-eeecCCChhhEEEcCCCeEEEeeccccccccccccccccc
Confidence 9999999964 357899999999999999999999999 999999999999999999999999998765432 2
Q ss_pred ccccCcccCCccccccCC--CCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHH
Q 014484 143 SYSTNLAFTPPEYMRTGR--VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRL 220 (423)
Q Consensus 143 ~~~~t~~y~aPE~~~~~~--~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 220 (423)
...++..|+|||.+.... ++.++|+||||++++++++|..|+............................++.++.++
T Consensus 169 ~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 248 (272)
T cd06629 169 SMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDF 248 (272)
T ss_pred cccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCccccccCCHHHHHH
Confidence 235788999999987654 789999999999999999999887543211111000111111111222233457889999
Q ss_pred HHHhcccCcCCCCCHHHHHHH
Q 014484 221 ASRCLQSEARERPNAKSLVIS 241 (423)
Q Consensus 221 i~~cl~~dp~~Rps~~~vl~~ 241 (423)
+.+||..||..|||+++++.|
T Consensus 249 i~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 249 LNACFTINPDNRPTARELLQH 269 (272)
T ss_pred HHHHhcCChhhCCCHHHHhhC
Confidence 999999999999999999977
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-37 Score=286.67 Aligned_cols=234 Identities=18% Similarity=0.214 Sum_probs=189.7
Q ss_pred CCCCccceeeee--cceeeeeecCCCh-hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
|+||.||.+... +..+++|.+.... ...+.+.+|+.+++.++|+||+++++.+..++..++||||+++++|.+++.
T Consensus 33 g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~- 111 (292)
T cd06658 33 GSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGALTDIVT- 111 (292)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcHHHHHh-
Confidence 889999998763 5667777765433 335678899999999999999999999999999999999999999999884
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccCCcc
Q 014484 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPPE 154 (423)
Q Consensus 79 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~aPE 154 (423)
.+.+++..+..++.||+.||.|||+++ ++||||||+||+++.++.++|+|||++...... ....++..|+|||
T Consensus 112 --~~~l~~~~~~~~~~qi~~~l~~LH~~~-ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE 188 (292)
T cd06658 112 --HTRMNEEQIATVCLSVLRALSYLHNQG-VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPE 188 (292)
T ss_pred --cCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCceeecCccccCHH
Confidence 346899999999999999999999999 999999999999999999999999998654322 2345788999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCC
Q 014484 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (423)
Q Consensus 155 ~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (423)
.+.+..++.++|+||||+++|||++|..||......... ........... ......+..+.+++.+||..||.+|||
T Consensus 189 ~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~P~~Rpt 265 (292)
T cd06658 189 VISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAM-RRIRDNLPPRV--KDSHKVSSVLRGFLDLMLVREPSQRAT 265 (292)
T ss_pred HHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHhcCCCcc--ccccccCHHHHHHHHHHccCChhHCcC
Confidence 998888999999999999999999999887653211110 01111111111 112235678999999999999999999
Q ss_pred HHHHHHHH
Q 014484 235 AKSLVISL 242 (423)
Q Consensus 235 ~~~vl~~l 242 (423)
+++++++-
T Consensus 266 ~~~il~~~ 273 (292)
T cd06658 266 AQELLQHP 273 (292)
T ss_pred HHHHhhCh
Confidence 99999873
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-38 Score=267.19 Aligned_cols=235 Identities=17% Similarity=0.236 Sum_probs=187.7
Q ss_pred CCCCccceeeeec--ceeeeeecCC--ChhhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWFH--CHLKSSVLES--SDLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~~--~~~~~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
|+.|.|+++.+.. .-+++|.+.. .+.+.++++..+.++... +.|+||+++|+|..+...++.||.+.. -++.++
T Consensus 103 GtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs~-C~ekLl 181 (391)
T KOG0983|consen 103 GTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMST-CAEKLL 181 (391)
T ss_pred CCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHHH-HHHHHH
Confidence 7889999998864 6677776644 445567888888887776 589999999999999999999999843 455555
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC---CccccCcccCCc
Q 014484 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTPP 153 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~~t~~y~aP 153 (423)
++ -.+++++..+-++...++.||.||.++..|+|||+||+|||+|+.|++||||||++-.+.+. +...|.+.||||
T Consensus 182 kr-ik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAhtrsAGC~~YMaP 260 (391)
T KOG0983|consen 182 KR-IKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAHTRSAGCAAYMAP 260 (391)
T ss_pred HH-hcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeecccccccccCCccccCc
Confidence 43 45679999999999999999999998866999999999999999999999999998766544 445688999999
Q ss_pred ccccc---CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCC--hhHHHHHHHHHHHhcccC
Q 014484 154 EYMRT---GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFS--NDEGTELVRLASRCLQSE 228 (423)
Q Consensus 154 E~~~~---~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~cl~~d 228 (423)
|.+.- .+|+.++||||||++++||.||..|+.+...+.. .+..+++. ..+.++ ...++++++|+..||++|
T Consensus 261 ERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe---~ltkvln~-ePP~L~~~~gFSp~F~~fv~~CL~kd 336 (391)
T KOG0983|consen 261 ERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFE---VLTKVLNE-EPPLLPGHMGFSPDFQSFVKDCLTKD 336 (391)
T ss_pred cccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHH---HHHHHHhc-CCCCCCcccCcCHHHHHHHHHHhhcC
Confidence 98863 3599999999999999999999999987532221 12222221 112222 236889999999999999
Q ss_pred cCCCCCHHHHHHHH
Q 014484 229 ARERPNAKSLVISL 242 (423)
Q Consensus 229 p~~Rps~~~vl~~l 242 (423)
+.+||...++++|-
T Consensus 337 ~r~RP~Y~~Ll~h~ 350 (391)
T KOG0983|consen 337 HRKRPKYNKLLEHP 350 (391)
T ss_pred cccCcchHHHhcCc
Confidence 99999999999873
|
|
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-37 Score=280.02 Aligned_cols=232 Identities=18% Similarity=0.247 Sum_probs=186.2
Q ss_pred CCCCccceeeee--cceeeeeecCCC------hhhHHHHHHHHHHHhcCCCCCccceEeEEEeC--CceeEEEecCCCCC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS------DLGETLNLEEAKAVGNLRSERLANLIGCCYEA--DERLLVAEFMPNET 71 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e~~~~~~ 71 (423)
|+||.||.+... +..++++.+... ......+.+|+.+++.++||||+++++++... ...+++|||+++++
T Consensus 13 g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l~~e~~~~~~ 92 (266)
T cd06651 13 GAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIFMEYMPGGS 92 (266)
T ss_pred CCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEEEEeCCCCCc
Confidence 899999999874 566777665432 12345688999999999999999999998763 56789999999999
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-------Ccc
Q 014484 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-------KSY 144 (423)
Q Consensus 72 L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-------~~~ 144 (423)
|.+++.. ...+++..++.++.|++.||.|||+++ ++||||+|+||+++.++.++|+|||+++..... ...
T Consensus 93 L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~LH~~~-i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 169 (266)
T cd06651 93 VKDQLKA--YGALTESVTRKYTRQILEGMSYLHSNM-IVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSV 169 (266)
T ss_pred HHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEECCCCCEEEccCCCccccccccccCCccccC
Confidence 9999853 446899999999999999999999999 999999999999999999999999998754321 224
Q ss_pred ccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHh
Q 014484 145 STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRC 224 (423)
Q Consensus 145 ~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 224 (423)
.++..|+|||.+.+..++.++|+||+||++|+|++|..||..... ...............++...++.+.+++ +|
T Consensus 170 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~li-~~ 244 (266)
T cd06651 170 TGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEA----MAAIFKIATQPTNPQLPSHISEHARDFL-GC 244 (266)
T ss_pred CccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccch----HHHHHHHhcCCCCCCCchhcCHHHHHHH-HH
Confidence 578899999999988899999999999999999999988764311 1111222222223344555677888888 68
Q ss_pred cccCcCCCCCHHHHHHH
Q 014484 225 LQSEARERPNAKSLVIS 241 (423)
Q Consensus 225 l~~dp~~Rps~~~vl~~ 241 (423)
|..+|++||++++++.|
T Consensus 245 ~~~~p~~Rp~~~eil~h 261 (266)
T cd06651 245 IFVEARHRPSAEELLRH 261 (266)
T ss_pred hcCChhhCcCHHHHhcC
Confidence 88899999999999876
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-37 Score=283.16 Aligned_cols=239 Identities=18% Similarity=0.231 Sum_probs=191.9
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.+. +..+++|.+.... .....+..|+++++.++||||+++++++...+..|+||||+++++|.++
T Consensus 4 g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 83 (277)
T cd05577 4 GGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDLKYH 83 (277)
T ss_pred CCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcHHHH
Confidence 899999998764 6677777765432 2244667899999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC---CccccCcccCC
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTP 152 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~~t~~y~a 152 (423)
+.......+++..+..++.|++.||.|||+++ ++||||+|+||+++.++.++|+|||++...... ....++..|+|
T Consensus 84 l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~-i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~y~~ 162 (277)
T cd05577 84 IYNVGEPGFPEARAIFYAAQIICGLEHLHQRR-IVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAGTPGYMA 162 (277)
T ss_pred HHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEECCCCCEEEccCcchhhhccCCccccccCCCCcCC
Confidence 86544457999999999999999999999999 999999999999999999999999988755432 23456788999
Q ss_pred ccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCC
Q 014484 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (423)
Q Consensus 153 PE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (423)
||.+.+..++.++|+||+||++++|++|..||........ ...+.... .......+...++++.++|.+||+.||.+|
T Consensus 163 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~R 240 (277)
T cd05577 163 PEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVE-KEELKRRT-LEMAVEYPDKFSPEAKDLCEALLQKDPEKR 240 (277)
T ss_pred HHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCccccc-HHHHHhcc-ccccccCCccCCHHHHHHHHHHccCChhHc
Confidence 9999888899999999999999999999988765321100 01111111 111223444567889999999999999999
Q ss_pred C-----CHHHHHHHHH
Q 014484 233 P-----NAKSLVISLM 243 (423)
Q Consensus 233 p-----s~~~vl~~l~ 243 (423)
| ++.+++.|..
T Consensus 241 ~~~~~~~~~~ll~h~~ 256 (277)
T cd05577 241 LGCRGGSADEVREHPL 256 (277)
T ss_pred cCCCcccHHHHHhChh
Confidence 9 7777877643
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=280.95 Aligned_cols=233 Identities=15% Similarity=0.239 Sum_probs=192.6
Q ss_pred CCCCccceeeee--cceeeeeecCCCh--hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~ 77 (423)
|+||.||++.+. +..+++|...... .....+.+|+.++..++||||+++++++..++..++||||+++++|.+++.
T Consensus 15 G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~i~ 94 (277)
T cd06641 15 GSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE 94 (277)
T ss_pred cCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCCCCcHHHHHh
Confidence 899999999874 5667777765432 334678899999999999999999999999999999999999999999984
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccCCc
Q 014484 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPP 153 (423)
Q Consensus 78 ~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~aP 153 (423)
...+++..+..++.|++.++.+||+++ ++|+||+|+||+++.++.++|+|||++...... ....++..|+||
T Consensus 95 ---~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~P 170 (277)
T cd06641 95 ---PGPLDETQIATILREILKGLDYLHSEK-KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAP 170 (277)
T ss_pred ---cCCCCHHHHHHHHHHHHHHHHHHccCC-eecCCCCHHhEEECCCCCEEEeecccceecccchhhhccccCCccccCh
Confidence 346899999999999999999999999 999999999999999999999999998765432 224578889999
Q ss_pred cccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCC
Q 014484 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERP 233 (423)
Q Consensus 154 E~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 233 (423)
|.+.+...+.++|+|||||++++|++|..|+...... .....+........+..++.++.+++.+||+.+|..||
T Consensus 171 E~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp 245 (277)
T cd06641 171 EVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPM-----KVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRP 245 (277)
T ss_pred hhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchH-----HHHHHHhcCCCCCCCcccCHHHHHHHHHHccCChhhCc
Confidence 9998888899999999999999999999887543211 11111222222334455678899999999999999999
Q ss_pred CHHHHHHHHH
Q 014484 234 NAKSLVISLM 243 (423)
Q Consensus 234 s~~~vl~~l~ 243 (423)
++.+++.|..
T Consensus 246 ~~~~~l~~~~ 255 (277)
T cd06641 246 TAKELLKHKF 255 (277)
T ss_pred CHHHHHhCHH
Confidence 9999999743
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=279.41 Aligned_cols=238 Identities=18% Similarity=0.248 Sum_probs=190.5
Q ss_pred CCCCccceeeee--cceeeeeecCCCh--hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~ 77 (423)
|+||.||++.+. +..+++|++.... .....+.+|+++++.++|+||+++++.+..++..++|||+++|++|.+++.
T Consensus 12 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~ 91 (267)
T cd06610 12 GATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMK 91 (267)
T ss_pred CCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEeccCCCcHHHHHH
Confidence 899999999874 5567777765433 346778999999999999999999999999999999999999999999996
Q ss_pred cCCC-CCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC--------ccccCc
Q 014484 78 HWET-QPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK--------SYSTNL 148 (423)
Q Consensus 78 ~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--------~~~~t~ 148 (423)
.... ..+++..+..++.|++.||.+||+++ ++||||+|+||++++++.++|+|||++....... ...++.
T Consensus 92 ~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~-i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~ 170 (267)
T cd06610 92 SSYPRGGLDEAIIATVLKEVLKGLEYLHSNG-QIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTP 170 (267)
T ss_pred HhcccCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHhEEEcCCCCEEEcccchHHHhccCccccccccccccCCh
Confidence 4322 56899999999999999999999999 9999999999999999999999999987555332 235788
Q ss_pred ccCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCC-ChhHHHHHHHHHHHhcc
Q 014484 149 AFTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHF-SNDEGTELVRLASRCLQ 226 (423)
Q Consensus 149 ~y~aPE~~~~~-~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~ 226 (423)
.|+|||.+... .++.++|+|||||++++|++|..||............. ........... ...+++.+.+++.+||.
T Consensus 171 ~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 249 (267)
T cd06610 171 CWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTL-QNDPPSLETGADYKKYSKSFRKMISLCLQ 249 (267)
T ss_pred hhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHh-cCCCCCcCCccccccccHHHHHHHHHHcC
Confidence 99999998876 68999999999999999999998875431111000000 00011111111 12457889999999999
Q ss_pred cCcCCCCCHHHHHHH
Q 014484 227 SEARERPNAKSLVIS 241 (423)
Q Consensus 227 ~dp~~Rps~~~vl~~ 241 (423)
.||++|||+++++.|
T Consensus 250 ~~p~~Rp~~~~ll~~ 264 (267)
T cd06610 250 KDPSKRPTAEELLKH 264 (267)
T ss_pred CChhhCcCHHHHhhC
Confidence 999999999999876
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-37 Score=283.94 Aligned_cols=237 Identities=19% Similarity=0.217 Sum_probs=198.0
Q ss_pred CCCCccceeeee--cceeeeeecCCC----hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS----DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
||||+||.+... +.-++.|.+.+. .++....++|-.+|+.++.+.||.+--.|++.+.+|+|+..|.||+|.-+
T Consensus 196 GGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVLtlMNGGDLkfH 275 (591)
T KOG0986|consen 196 GGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVLTLMNGGDLKFH 275 (591)
T ss_pred ccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEEEeecCCceeEE
Confidence 999999998875 444555554333 33455678999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCCc---cccCcccCC
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS---YSTNLAFTP 152 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~---~~~t~~y~a 152 (423)
|-+..+..+++..++-++.+|+.||++||+.+ ||+||+||+|||+|+.|+++|+|+|+|..+..+.. ..||.+|||
T Consensus 276 iyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~-iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~~~~rvGT~GYMA 354 (591)
T KOG0986|consen 276 IYNHGNPGFDEQRARFYAAEIICGLEHLHRRR-IVYRDLKPENILLDDHGHVRISDLGLAVEIPEGKPIRGRVGTVGYMA 354 (591)
T ss_pred eeccCCCCCchHHHHHHHHHHHhhHHHHHhcc-eeeccCChhheeeccCCCeEeeccceEEecCCCCccccccCcccccC
Confidence 97766678999999999999999999999999 99999999999999999999999999998876644 368999999
Q ss_pred ccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCC
Q 014484 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (423)
Q Consensus 153 PE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (423)
||++..+.|+...|+|||||++|||+.|+.||....... ..+.+...+. .....++...++++.++.+..|++||.+|
T Consensus 355 PEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKv-k~eEvdrr~~-~~~~ey~~kFS~eakslc~~LL~Kdp~~R 432 (591)
T KOG0986|consen 355 PEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKV-KREEVDRRTL-EDPEEYSDKFSEEAKSLCEGLLTKDPEKR 432 (591)
T ss_pred HHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhh-hHHHHHHHHh-cchhhcccccCHHHHHHHHHHHccCHHHh
Confidence 999999999999999999999999999999987653222 1222222221 22335677789999999999999999999
Q ss_pred C-----CHHHHHHH
Q 014484 233 P-----NAKSLVIS 241 (423)
Q Consensus 233 p-----s~~~vl~~ 241 (423)
. .++++.+|
T Consensus 433 LGcrg~ga~evk~H 446 (591)
T KOG0986|consen 433 LGCRGEGAQEVKEH 446 (591)
T ss_pred ccCCCcCcchhhhC
Confidence 5 45566655
|
|
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-37 Score=281.14 Aligned_cols=235 Identities=14% Similarity=0.178 Sum_probs=189.0
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHHhcC-CCCCccceEeEEEeCC------ceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNL-RSERLANLIGCCYEAD------ERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~------~~~lv~e~~~~~~L 72 (423)
|++|.||.+.+. +..++++++.......+.+.+|+.+++++ .|+||+++++++.... ..++||||+++++|
T Consensus 17 g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L 96 (275)
T cd06608 17 GTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSV 96 (275)
T ss_pred CCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEEEEEEcCCCCcH
Confidence 789999999884 56678888777666677899999999999 7999999999997655 37999999999999
Q ss_pred HhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----Ccccc
Q 014484 73 AKHLFHWE--TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYST 146 (423)
Q Consensus 73 ~~~i~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~ 146 (423)
.+++.... +..+++..+..++.|++.||.|||+++ ++|+||+|+||+++.++.++|+|||++...... ....+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~-i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~ 175 (275)
T cd06608 97 TDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENK-VIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTLGRRNTFIG 175 (275)
T ss_pred HHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCC-cccCCCCHHHEEEccCCeEEECCCccceecccchhhhcCccc
Confidence 99886433 467999999999999999999999999 999999999999999999999999998754432 23457
Q ss_pred CcccCCcccccc-----CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccc-cCCCChhHHHHHHHH
Q 014484 147 NLAFTPPEYMRT-----GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSAL-EGHFSNDEGTELVRL 220 (423)
Q Consensus 147 t~~y~aPE~~~~-----~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~l 220 (423)
+..|+|||.+.. ..++.++|||||||++++|++|..||...... ........... ....+...+.++.++
T Consensus 176 ~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l 251 (275)
T cd06608 176 TPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPM----RALFKIPRNPPPTLKSPENWSKKFNDF 251 (275)
T ss_pred cccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchH----HHHHHhhccCCCCCCchhhcCHHHHHH
Confidence 889999998753 24778999999999999999999887643111 11111111111 111122356789999
Q ss_pred HHHhcccCcCCCCCHHHHHHH
Q 014484 221 ASRCLQSEARERPNAKSLVIS 241 (423)
Q Consensus 221 i~~cl~~dp~~Rps~~~vl~~ 241 (423)
+.+||..||++|||+.+++.+
T Consensus 252 i~~~l~~dp~~Rpt~~~ll~~ 272 (275)
T cd06608 252 ISECLIKNYEQRPFMEELLEH 272 (275)
T ss_pred HHHHhhcChhhCcCHHHHhcC
Confidence 999999999999999999875
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-37 Score=284.86 Aligned_cols=238 Identities=16% Similarity=0.148 Sum_probs=184.8
Q ss_pred CCCCccceeeee--cceeeeeecCCCh---hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
|++|.||++... +..+++|.+.... .....+.+|+.+++.++||||+++++++..++..++||||+. ++|.+++
T Consensus 11 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~~ 89 (285)
T cd07861 11 GTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFLS-MDLKKYL 89 (285)
T ss_pred cCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecCC-CCHHHHH
Confidence 889999999874 5667777664332 124567899999999999999999999999999999999997 4888887
Q ss_pred ccCC-CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccC
Q 014484 77 FHWE-TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFT 151 (423)
Q Consensus 77 ~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~ 151 (423)
.... +..+++..+..++.|++.||.|||+++ ++||||||+||+++.++.++|+|||++...... ....+++.|+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~ 168 (285)
T cd07861 90 DSLPKGQYMDAELVKSYLYQILQGILFCHSRR-VLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYTHEVVTLWYR 168 (285)
T ss_pred hcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCC-eeecCCCHHHEEEcCCCcEEECcccceeecCCCcccccCCccccccc
Confidence 5432 357999999999999999999999999 999999999999999999999999998755432 2234678999
Q ss_pred CccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhch--------------------hhhhccc---cccC
Q 014484 152 PPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKN--------------------FLLLMDS---ALEG 207 (423)
Q Consensus 152 aPE~~~~~-~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~--------------------~~~~~~~---~~~~ 207 (423)
|||.+.+. .++.++|||||||++++|+||.+||............ ....... ....
T Consensus 169 aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (285)
T cd07861 169 APEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLR 248 (285)
T ss_pred ChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhH
Confidence 99988754 4788999999999999999999887643211100000 0000000 0000
Q ss_pred CCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014484 208 HFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (423)
Q Consensus 208 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~ 241 (423)
.....+++++.++|.+||..||.+|||+.+++.+
T Consensus 249 ~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~ 282 (285)
T cd07861 249 SAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH 282 (285)
T ss_pred HhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 1112356788999999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-36 Score=284.34 Aligned_cols=240 Identities=17% Similarity=0.213 Sum_probs=193.9
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||++.+. +..+++|.+.... .....+.+|+++++.++|||++++++++..+...++||||+.| +|.+.
T Consensus 36 G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g-~l~~~ 114 (317)
T cd06635 36 GSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEYCLG-SASDL 114 (317)
T ss_pred CCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeCCCC-CHHHH
Confidence 889999999874 5667777764322 2345688999999999999999999999999999999999976 77777
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCCccccCcccCCccc
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEY 155 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~t~~y~aPE~ 155 (423)
+.. ...++++.++..++.|++.||.|||+++ ++||||+|+||+++.++.++|+|||++..........++..|+|||.
T Consensus 115 ~~~-~~~~l~~~~~~~i~~~i~~~l~~lH~~~-i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~y~aPE~ 192 (317)
T cd06635 115 LEV-HKKPLQEVEIAAITHGALQGLAYLHSHN-MIHRDIKAGNILLTEPGQVKLADFGSASIASPANSFVGTPYWMAPEV 192 (317)
T ss_pred HHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCcccEEECCCCCEEEecCCCccccCCcccccCCccccChhh
Confidence 643 3456899999999999999999999999 99999999999999999999999999887776667788999999998
Q ss_pred cc---cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCC
Q 014484 156 MR---TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (423)
Q Consensus 156 ~~---~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (423)
+. .+.++.++|+|||||++|+|++|..||...... ...................+..+.+++.+||+.+|.+|
T Consensus 193 ~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R 268 (317)
T cd06635 193 ILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM----SALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQDR 268 (317)
T ss_pred hhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHH----HHHHHHHhccCCCCCCccccHHHHHHHHHHccCCcccC
Confidence 74 456889999999999999999999887653111 11111111111122233456789999999999999999
Q ss_pred CCHHHHHHHHHhhhhh
Q 014484 233 PNAKSLVISLMSLQKE 248 (423)
Q Consensus 233 ps~~~vl~~l~~~~~~ 248 (423)
|++.+++.++......
T Consensus 269 pt~~~il~~~~~~~~~ 284 (317)
T cd06635 269 PTSEELLKHMFVLRER 284 (317)
T ss_pred cCHHHHHhChhhhccC
Confidence 9999999987765544
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-37 Score=288.90 Aligned_cols=237 Identities=12% Similarity=0.177 Sum_probs=177.1
Q ss_pred CCCCccceeeee----cceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEe--CCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF----HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYE--ADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~----~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||++.+. +..+++|.+..... ...+.+|+++++.++||||+++++++.. +...++||||+.+ +|.++
T Consensus 12 G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~ 89 (317)
T cd07867 12 GTYGHVYKAKRKDGKDEKEYALKQIEGTGI-SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH-DLWHI 89 (317)
T ss_pred CCCeeEEEEEecCCCccceEEEEEecCCCC-cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC-cHHHH
Confidence 899999999864 35577776654432 3467789999999999999999999864 4567899999975 78777
Q ss_pred hccC-------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeee----cCCCCeEEccccccccCCCC---
Q 014484 76 LFHW-------ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILF----DKDGNPRLSSFGLMKNSRDG--- 141 (423)
Q Consensus 76 i~~~-------~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill----~~~~~~kl~Dfg~~~~~~~~--- 141 (423)
+... ....+++..+..++.||+.||.|||+++ ++||||||+||++ +.++.++|+|||+++.....
T Consensus 90 ~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~ 168 (317)
T cd07867 90 IKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW-VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP 168 (317)
T ss_pred HHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC-EEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCccc
Confidence 6421 1235889999999999999999999999 9999999999999 56678999999999865432
Q ss_pred ----CccccCcccCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhh--------------------ch
Q 014484 142 ----KSYSTNLAFTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRS--------------------KN 196 (423)
Q Consensus 142 ----~~~~~t~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~--------------------~~ 196 (423)
....+|+.|+|||.+.+. .++.++|||||||++|||+||.+||.......... ..
T Consensus 169 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (317)
T cd07867 169 LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKD 248 (317)
T ss_pred ccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcCCCChhh
Confidence 224578899999998764 48999999999999999999998875321110000 00
Q ss_pred hhhh---------cccccc------------CCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014484 197 FLLL---------MDSALE------------GHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (423)
Q Consensus 197 ~~~~---------~~~~~~------------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~ 241 (423)
+... ...... .......+..+.+++.+||+.||.+|||++++++|
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~h 314 (317)
T cd07867 249 WEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQD 314 (317)
T ss_pred hhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcC
Confidence 0000 000000 00011123568899999999999999999999976
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=283.19 Aligned_cols=232 Identities=18% Similarity=0.219 Sum_probs=193.3
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.+. +..+++|++.... .....+.+|++++++++||||+++++++..++..++||||+++++|.++
T Consensus 12 g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~ 91 (290)
T cd05580 12 GSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVMEYVPGGELFSH 91 (290)
T ss_pred CCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEecCCCCCHHHH
Confidence 899999999884 5777777765432 2346788999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-CccccCcccCCcc
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSYSTNLAFTPPE 154 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~~t~~y~aPE 154 (423)
+.. ...+++..+..++.|++.||.|||+++ ++|+||+|+||+++.++.++|+|||++...... ....+++.|+|||
T Consensus 92 ~~~--~~~l~~~~~~~~~~qil~~l~~lH~~~-i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE 168 (290)
T cd05580 92 LRK--SGRFPEPVARFYAAQVVLALEYLHSLD-IVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTYTLCGTPEYLAPE 168 (290)
T ss_pred HHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEECCCCCEEEeeCCCccccCCCCCCCCCCccccChh
Confidence 864 357999999999999999999999999 999999999999999999999999998866544 3345788999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCC-
Q 014484 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERP- 233 (423)
Q Consensus 155 ~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp- 233 (423)
.+.+...+.++|+||||+++|+|++|..||....... ....... ....++...+..+.+++.+||..||.+|+
T Consensus 169 ~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----~~~~~~~--~~~~~~~~~~~~l~~li~~~l~~~p~~R~~ 242 (290)
T cd05580 169 IILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQ----IYEKILE--GKVRFPSFFSPDAKDLIRNLLQVDLTKRLG 242 (290)
T ss_pred hhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHhc--CCccCCccCCHHHHHHHHHHccCCHHHccC
Confidence 9988888999999999999999999998876542111 1111111 12234455678899999999999999998
Q ss_pred ----CHHHHHHHH
Q 014484 234 ----NAKSLVISL 242 (423)
Q Consensus 234 ----s~~~vl~~l 242 (423)
++++++.|.
T Consensus 243 ~~~~~~~~l~~~~ 255 (290)
T cd05580 243 NLKNGVNDIKNHP 255 (290)
T ss_pred cccCCHHHHHcCc
Confidence 888888774
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-37 Score=295.41 Aligned_cols=234 Identities=19% Similarity=0.273 Sum_probs=202.4
Q ss_pred CCCCccceeeee-----cceeeeeecCCChh--hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF-----HCHLKSSVLESSDL--GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~-----~~~~~~~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.|.++.|. ...|++|.+..... ..++|++|+.+|.+|+|+|++++||+..+ ....+|||++++|+|.+
T Consensus 121 GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELaplGSLld 199 (1039)
T KOG0199|consen 121 GSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELAPLGSLLD 199 (1039)
T ss_pred cceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhcccchHHH
Confidence 899999999995 35677777755543 47899999999999999999999999987 66889999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCCcc-------ccC
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY-------STN 147 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~-------~~t 147 (423)
.+.+.....|.......++.||+.|+.||.+++ +|||||-..|+|+-..-.+||+|||+.+.+..+... .-.
T Consensus 200 rLrka~~~~llv~~Lcdya~QiA~aM~YLeskr-lvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm~p~rkvP 278 (1039)
T KOG0199|consen 200 RLRKAKKAILLVSRLCDYAMQIAKAMQYLESKR-LVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVMAPQRKVP 278 (1039)
T ss_pred HHhhccccceeHHHHHHHHHHHHHHHHHHhhhh-hhhhhhhhhhheecccceeeeecccceeccCCCCcceEecCCCcCc
Confidence 998755667889999999999999999999999 999999999999998889999999999988766432 235
Q ss_pred cccCCccccccCCCCCCcceehhHHHHHHHhhCC-CCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcc
Q 014484 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGK-HIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (423)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (423)
+.|+|||.++..+++.++|||++||++|||+|+. .||.+. ....+.+.++...+-.-++.|++++.+++..||.
T Consensus 279 fAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~-----~g~qIL~~iD~~erLpRPk~csedIY~imk~cWa 353 (1039)
T KOG0199|consen 279 FAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGC-----RGIQILKNIDAGERLPRPKYCSEDIYQIMKNCWA 353 (1039)
T ss_pred ccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCC-----CHHHHHHhccccccCCCCCCChHHHHHHHHHhcc
Confidence 6899999999999999999999999999999854 677774 4445555666555555677899999999999999
Q ss_pred cCcCCCCCHHHHHHHH
Q 014484 227 SEARERPNAKSLVISL 242 (423)
Q Consensus 227 ~dp~~Rps~~~vl~~l 242 (423)
.+|++|||+..|...+
T Consensus 354 h~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 354 HNPADRPTFSAIREDL 369 (1039)
T ss_pred CCccccccHHHHHHhH
Confidence 9999999999998554
|
|
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-36 Score=283.80 Aligned_cols=235 Identities=18% Similarity=0.198 Sum_probs=189.1
Q ss_pred CCCCccceeeee--cceeeeeecCCC----hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS----DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.+. +..+++|.+... ......+.+|+++++.++||||+++.++|..++..++||||+.| +|.++
T Consensus 26 g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~g-~l~~~ 104 (307)
T cd06607 26 GSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVMEYCLG-SASDI 104 (307)
T ss_pred CCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEHHhhCC-CHHHH
Confidence 889999999874 666777766432 22345788999999999999999999999999999999999975 77776
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCCccccCcccCCccc
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEY 155 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~t~~y~aPE~ 155 (423)
+.. ....+++..+..++.|++.||.|||+.+ ++||||+|+||++++++.++|+|||++..........++..|+|||.
T Consensus 105 ~~~-~~~~l~~~~~~~~~~ql~~~L~~LH~~~-i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~~~~~~~~y~aPE~ 182 (307)
T cd06607 105 LEV-HKKPLQEVEIAAICHGALQGLAYLHSHE-RIHRDIKAGNILLTEPGTVKLADFGSASLVSPANSFVGTPYWMAPEV 182 (307)
T ss_pred HHH-cccCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCcccEEECCCCCEEEeecCcceecCCCCCccCCccccCcee
Confidence 643 2446899999999999999999999999 99999999999999999999999999987766666778899999998
Q ss_pred cc---cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCC
Q 014484 156 MR---TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (423)
Q Consensus 156 ~~---~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (423)
+. ...++.++||||||+++|+|++|..|+......... ............+..++.++.+++.+||+.||++|
T Consensus 183 ~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R 258 (307)
T cd06607 183 ILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL----YHIAQNDSPTLSSNDWSDYFRNFVDSCLQKIPQDR 258 (307)
T ss_pred eeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHH----HHHhcCCCCCCCchhhCHHHHHHHHHHhcCChhhC
Confidence 74 355888999999999999999999887543211110 01111111111223457789999999999999999
Q ss_pred CCHHHHHHHHH
Q 014484 233 PNAKSLVISLM 243 (423)
Q Consensus 233 ps~~~vl~~l~ 243 (423)
|++.+++.+..
T Consensus 259 p~~~~il~~~~ 269 (307)
T cd06607 259 PSSEELLKHRF 269 (307)
T ss_pred cCHHHHhcChh
Confidence 99999998754
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-37 Score=268.67 Aligned_cols=236 Identities=16% Similarity=0.127 Sum_probs=184.5
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHHhcC-CCCCccceEeEEEeC----CceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNL-RSERLANLIGCCYEA----DERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~----~~~~lv~e~~~~~~L~~ 74 (423)
|-.|.|..++.. +...+.|++... ....+|+++.-.. .|||||++++++++. ..+.+|||.++||.|..
T Consensus 73 GinGkV~~C~~k~T~ekfALKvL~Ds----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~meGGeLfs 148 (400)
T KOG0604|consen 73 GINGKVVQCVHKRTQEKFALKVLLDS----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECMEGGELFS 148 (400)
T ss_pred ccCCceEEEEeccchhhhHHHHHhcC----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeecccchHHHH
Confidence 334555444432 555666665444 3455788876666 799999999999764 34789999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCC---CCeEEccccccccCCCC---CccccCc
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKD---GNPRLSSFGLMKNSRDG---KSYSTNL 148 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~---~~~kl~Dfg~~~~~~~~---~~~~~t~ 148 (423)
.|++..++.+++.++..|++||+.|+.|||+.+ |.||||||+|+|.... ..+||+|||+++..... .+.+-|+
T Consensus 149 riq~~g~~afTErea~eI~~qI~~Av~~lH~~n-IAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~~L~TPc~TP 227 (400)
T KOG0604|consen 149 RIQDRGDQAFTEREASEIMKQIGLAVRYLHSMN-IAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPGDLMTPCFTP 227 (400)
T ss_pred HHHHcccccchHHHHHHHHHHHHHHHHHHHhcc-hhhccCChhheeeecCCCCcceEecccccccccCCCccccCCcccc
Confidence 999888889999999999999999999999999 9999999999999644 46899999999977643 3456789
Q ss_pred ccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCC----hhHHHHHHHHHHHh
Q 014484 149 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFS----NDEGTELVRLASRC 224 (423)
Q Consensus 149 ~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~c 224 (423)
.|.|||++..++|+..+|+||+|+++|-|++|.+||...--..+...-...+.... -.|| ..+|++..++|+.+
T Consensus 228 yYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gq--y~FP~pEWs~VSe~aKdlIR~L 305 (400)
T KOG0604|consen 228 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQ--YEFPEPEWSCVSEAAKDLIRKL 305 (400)
T ss_pred cccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccC--ccCCChhHhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999875411111111111111111 1223 34689999999999
Q ss_pred cccCcCCCCCHHHHHHHHHh
Q 014484 225 LQSEARERPNAKSLVISLMS 244 (423)
Q Consensus 225 l~~dp~~Rps~~~vl~~l~~ 244 (423)
|..+|.+|.|+++++.|.+-
T Consensus 306 Lkt~PteRlTI~~~m~hpwi 325 (400)
T KOG0604|consen 306 LKTEPTERLTIEEVMDHPWI 325 (400)
T ss_pred hcCCchhheeHHHhhcCchh
Confidence 99999999999999988654
|
|
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=277.94 Aligned_cols=233 Identities=19% Similarity=0.226 Sum_probs=192.0
Q ss_pred CCCCccceeeee--cceeeeeecCCCh------hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHH
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD------LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLA 73 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 73 (423)
|++|.||.+++. +..+++|.+.... .....+.+|+.+++.++|+||+++++++..+...++||||+++++|.
T Consensus 11 g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 90 (258)
T cd06632 11 GSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFLELVPGGSLA 90 (258)
T ss_pred cCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEEEecCCCcHH
Confidence 899999999984 6677777664432 24567889999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC---CccccCccc
Q 014484 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAF 150 (423)
Q Consensus 74 ~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~~t~~y 150 (423)
+++.+ ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ....++..|
T Consensus 91 ~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~y 167 (258)
T cd06632 91 KLLKK--YGSFPEPVIRLYTRQILLGLEYLHDRN-TVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKSFKGSPYW 167 (258)
T ss_pred HHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEccCccceeccccccccccCCCcce
Confidence 99964 346899999999999999999999999 999999999999999999999999998765433 345578899
Q ss_pred CCccccccCC-CCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCc
Q 014484 151 TPPEYMRTGR-VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEA 229 (423)
Q Consensus 151 ~aPE~~~~~~-~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 229 (423)
++||.+.... ++.++|+|||||++|+|++|..||...... ...............+..+++++.+++.+||+.+|
T Consensus 168 ~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p 243 (258)
T cd06632 168 MAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGV----AAVFKIGRSKELPPIPDHLSDEAKDFILKCLQRDP 243 (258)
T ss_pred eCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHH----HHHHHHHhcccCCCcCCCcCHHHHHHHHHHhhcCc
Confidence 9999987666 899999999999999999999887554211 11111111122233455567889999999999999
Q ss_pred CCCCCHHHHHHH
Q 014484 230 RERPNAKSLVIS 241 (423)
Q Consensus 230 ~~Rps~~~vl~~ 241 (423)
.+||++.+++.+
T Consensus 244 ~~Rp~~~~~l~~ 255 (258)
T cd06632 244 SLRPTAAELLEH 255 (258)
T ss_pred ccCcCHHHHhcC
Confidence 999999999875
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-37 Score=285.83 Aligned_cols=234 Identities=17% Similarity=0.233 Sum_probs=191.1
Q ss_pred CCCCccceeee--ecceeeeeecCCCh-hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICW--FHCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~--~~~~~~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
|+||.||++.. .+..+++|.+.... ...+.+.+|+.+++.++|+||+++++++..++..++||||+++++|.+++.
T Consensus 30 g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~- 108 (297)
T cd06656 30 GASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT- 108 (297)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecccCCCCHHHHHH-
Confidence 78999999986 36778887775433 335677899999999999999999999999999999999999999999984
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccCCcc
Q 014484 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPPE 154 (423)
Q Consensus 79 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~aPE 154 (423)
...+++.++..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++...... ....+++.|+|||
T Consensus 109 --~~~~~~~~~~~~~~~l~~~L~~LH~~~-i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE 185 (297)
T cd06656 109 --ETCMDEGQIAAVCRECLQALDFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPE 185 (297)
T ss_pred --hCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEECcCccceEccCCccCcCcccCCccccCHH
Confidence 346899999999999999999999999 999999999999999999999999998765433 2345788999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCC
Q 014484 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (423)
Q Consensus 155 ~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (423)
.+.+..++.++|+|||||++|+|++|..||........ ..............+...+..+.+++.+||..||++|||
T Consensus 186 ~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps 262 (297)
T cd06656 186 VVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA---LYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGS 262 (297)
T ss_pred HHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchh---eeeeccCCCCCCCCccccCHHHHHHHHHHccCChhhCcC
Confidence 99988899999999999999999999988854311100 000001111111233456678999999999999999999
Q ss_pred HHHHHHHH
Q 014484 235 AKSLVISL 242 (423)
Q Consensus 235 ~~~vl~~l 242 (423)
+++++.+-
T Consensus 263 ~~~il~~~ 270 (297)
T cd06656 263 AKELLQHP 270 (297)
T ss_pred HHHHhcCc
Confidence 99999873
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=290.83 Aligned_cols=233 Identities=12% Similarity=0.144 Sum_probs=179.5
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW 79 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~ 79 (423)
|+||.||.+.+. +..+++|+... .....|+.+++.++||||+++++++..+...++|||++.+ +|.+++..
T Consensus 77 G~~g~Vy~~~~~~~~~~valK~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~- 149 (357)
T PHA03209 77 GSEGRVFVATKPGQPDPVVLKIGQK-----GTTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYSS-DLYTYLTK- 149 (357)
T ss_pred CCCeEEEEEEECCCCceEEEEeCCc-----cccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccCC-cHHHHHHh-
Confidence 899999999985 34566665332 2345799999999999999999999999999999999965 88888854
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC---CccccCcccCCcccc
Q 014484 80 ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTPPEYM 156 (423)
Q Consensus 80 ~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~~t~~y~aPE~~ 156 (423)
....+++..+..|+.||+.||.|||+++ |+||||||+|||++.++.++|+|||+++..... ....||+.|+|||++
T Consensus 150 ~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~ 228 (357)
T PHA03209 150 RSRPLPIDQALIIEKQILEGLRYLHAQR-IIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFLGLAGTVETNAPEVL 228 (357)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEEecCccccccccCcccccccccccccCCeec
Confidence 3457999999999999999999999999 999999999999999999999999998754322 335689999999999
Q ss_pred ccCCCCCCcceehhHHHHHHHhhCCCCCCchhhH------Hhhhchhhhhcc------cccc------------------
Q 014484 157 RTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALD------LIRSKNFLLLMD------SALE------------------ 206 (423)
Q Consensus 157 ~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~------~~~~~~~~~~~~------~~~~------------------ 206 (423)
.+..++.++|||||||++|||+++..++...... ......+...+. ....
T Consensus 229 ~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (357)
T PHA03209 229 ARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLE 308 (357)
T ss_pred CCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccC
Confidence 9889999999999999999999876554221000 000000000000 0000
Q ss_pred -CCC-------ChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHH
Q 014484 207 -GHF-------SNDEGTELVRLASRCLQSEARERPNAKSLVISL 242 (423)
Q Consensus 207 -~~~-------~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l 242 (423)
..+ ....+.++.++|.+||+.||.+|||+.++++|-
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp 352 (357)
T PHA03209 309 RQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYP 352 (357)
T ss_pred CCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCc
Confidence 000 012345677899999999999999999999884
|
|
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-37 Score=285.71 Aligned_cols=235 Identities=18% Similarity=0.214 Sum_probs=191.1
Q ss_pred CCCCccceeeee--cceeeeeecCCCh-hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
|+||.||.+... +..+++|.+.... .....+.+|+.++..++||||+++++++..++..++||||+++++|..++.
T Consensus 32 g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~- 110 (297)
T cd06659 32 GSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGALTDIVS- 110 (297)
T ss_pred CCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCHHHHHh-
Confidence 899999999874 6677777764433 335678899999999999999999999999999999999999999999874
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccCCcc
Q 014484 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPPE 154 (423)
Q Consensus 79 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~aPE 154 (423)
...+++..+..++.|++.||.|||+++ ++||||||+||+++.++.++|+|||++...... ....++..|+|||
T Consensus 111 --~~~~~~~~~~~~~~qi~~~L~~LH~~~-ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE 187 (297)
T cd06659 111 --QTRLNEEQIATVCESVLQALCYLHSQG-VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPE 187 (297)
T ss_pred --hcCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHeEEccCCcEEEeechhHhhcccccccccceecCccccCHH
Confidence 356899999999999999999999999 999999999999999999999999998654432 2345788999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhcc-ccccCCCChhHHHHHHHHHHHhcccCcCCCC
Q 014484 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD-SALEGHFSNDEGTELVRLASRCLQSEARERP 233 (423)
Q Consensus 155 ~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 233 (423)
.+.+..++.++|+|||||++++|++|..||........ ...... ...........+..+.+++.+||+.+|.+||
T Consensus 188 ~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rp 263 (297)
T cd06659 188 VISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQA----MKRLRDSPPPKLKNAHKISPVLRDFLERMLTREPQERA 263 (297)
T ss_pred HHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHhccCCCCccccCCCCHHHHHHHHHHhcCCcccCc
Confidence 99988899999999999999999999988764321111 111100 0111112234567899999999999999999
Q ss_pred CHHHHHHHHHh
Q 014484 234 NAKSLVISLMS 244 (423)
Q Consensus 234 s~~~vl~~l~~ 244 (423)
++++++++..-
T Consensus 264 s~~~ll~~~~~ 274 (297)
T cd06659 264 TAQELLDHPFL 274 (297)
T ss_pred CHHHHhhChhh
Confidence 99999987543
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=301.18 Aligned_cols=241 Identities=15% Similarity=0.125 Sum_probs=181.5
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHHhcCCC------CCccceEeEEEeC-CceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNLRS------ERLANLIGCCYEA-DERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h------~niv~~~~~~~~~-~~~~lv~e~~~~~~L 72 (423)
|+||.||++.+. +..+++|++.........+..|+.++..++| .+++.+++++... ...|+|||++ |++|
T Consensus 140 G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~~iv~~~~-g~~l 218 (467)
T PTZ00284 140 GTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMCIVMPKY-GPCL 218 (467)
T ss_pred ccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceEEEEEecc-CCCH
Confidence 899999999874 5678888876544444556677777777754 4588899988765 4678999998 6789
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHc-CCCeeeccCCCCCeeecCCC----------------CeEEcccccc
Q 014484 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSS-KGRALYHDLNAYRILFDKDG----------------NPRLSSFGLM 135 (423)
Q Consensus 73 ~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~~iiH~dlkp~Nill~~~~----------------~~kl~Dfg~~ 135 (423)
.+++.+ .+.+++..+..++.||+.||.|||+ .+ ||||||||+|||++.++ .+||+|||++
T Consensus 219 ~~~l~~--~~~l~~~~~~~i~~qi~~aL~yLH~~~g-IiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~ 295 (467)
T PTZ00284 219 LDWIMK--HGPFSHRHLAQIIFQTGVALDYFHTELH-LMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGC 295 (467)
T ss_pred HHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhcCC-eecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCcc
Confidence 888854 4579999999999999999999998 48 99999999999998765 4999999987
Q ss_pred ccCCC-CCccccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhch----------h-------
Q 014484 136 KNSRD-GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKN----------F------- 197 (423)
Q Consensus 136 ~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~----------~------- 197 (423)
..... .....||+.|+|||++.+..++.++|||||||++|||++|..||............ +
T Consensus 296 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~ 375 (467)
T PTZ00284 296 CDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTE 375 (467)
T ss_pred ccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccch
Confidence 65433 24467899999999999999999999999999999999999998653211100000 0
Q ss_pred --hhhccc--cccCCC-C--------------hhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhh
Q 014484 198 --LLLMDS--ALEGHF-S--------------NDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQ 246 (423)
Q Consensus 198 --~~~~~~--~~~~~~-~--------------~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~~ 246 (423)
...... ...... + ....+.+.+||.+||++||.+|||++++++|-.-..
T Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~ 443 (467)
T PTZ00284 376 EARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLK 443 (467)
T ss_pred hHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCccccc
Confidence 000000 000000 0 001356789999999999999999999999865443
|
|
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-37 Score=280.82 Aligned_cols=234 Identities=18% Similarity=0.183 Sum_probs=194.6
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.+. +..+++|++.... .....+.+|++++++++||||+.+++.+..+...++||||+.|++|.++
T Consensus 11 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 90 (258)
T cd05578 11 GAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDLLLGGDLRYH 90 (258)
T ss_pred CCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeCCCCCCHHHH
Confidence 899999999885 6777877775433 3456888999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC---CccccCcccCC
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTP 152 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~~t~~y~a 152 (423)
+.. ...+++..+..++.|++.||.|||+++ ++|+||+|+||++++++.++|+|||++...... ....++..|+|
T Consensus 91 l~~--~~~l~~~~~~~~~~~i~~~l~~lh~~~-i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~y~~ 167 (258)
T cd05578 91 LSQ--KVKFSEEQVKFWICEIVLALEYLHSKG-IIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTSTSGTPGYMA 167 (258)
T ss_pred HHh--cCCcCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHeEEcCCCCEEEeecccccccCCCccccccCCChhhcC
Confidence 954 357999999999999999999999999 999999999999999999999999998766544 33457889999
Q ss_pred ccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCC
Q 014484 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (423)
Q Consensus 153 PE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (423)
||.+.+..++.++|+||||+++|+|++|..|+...... ........... .....+...+.++.++|.+||+.||.+|
T Consensus 168 PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~R 244 (258)
T cd05578 168 PEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT--IRDQIRAKQET-ADVLYPATWSTEAIDAINKLLERDPQKR 244 (258)
T ss_pred HHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc--HHHHHHHHhcc-ccccCcccCcHHHHHHHHHHccCChhHc
Confidence 99998888999999999999999999999888754321 01111111111 2334555667899999999999999999
Q ss_pred CCH--HHHHHH
Q 014484 233 PNA--KSLVIS 241 (423)
Q Consensus 233 ps~--~~vl~~ 241 (423)
|++ ++++.+
T Consensus 245 ~~~~~~~l~~~ 255 (258)
T cd05578 245 LGDNLKDLKNH 255 (258)
T ss_pred CCccHHHHhcC
Confidence 999 777654
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-36 Score=280.18 Aligned_cols=237 Identities=17% Similarity=0.250 Sum_probs=194.1
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW 79 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~ 79 (423)
|++|.||.+.+. +..+++|++.........+.+|++++..++|+||+++++++...+..++|+||++|++|.+++...
T Consensus 30 g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~ 109 (286)
T cd06614 30 GASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQN 109 (286)
T ss_pred CCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEeccCCCcHHHHHHHh
Confidence 789999999885 667788877665545678889999999999999999999999999999999999999999999652
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccCCccc
Q 014484 80 ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPPEY 155 (423)
Q Consensus 80 ~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~aPE~ 155 (423)
. ..+++..+..++.|++.||.+||+.| ++|+||+|+||+++.++.++|+|||++...... ....++..|++||.
T Consensus 110 ~-~~l~~~~~~~i~~~i~~~L~~lH~~g-i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~PE~ 187 (286)
T cd06614 110 F-VRMNEPQIAYVCREVLQGLEYLHSQN-VIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEV 187 (286)
T ss_pred c-cCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCChhhEEEcCCCCEEECccchhhhhccchhhhccccCCcccCCHhH
Confidence 2 37999999999999999999999999 999999999999999999999999987654433 23456789999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccC-CCChhHHHHHHHHHHHhcccCcCCCCC
Q 014484 156 MRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEG-HFSNDEGTELVRLASRCLQSEARERPN 234 (423)
Q Consensus 156 ~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (423)
+.+..++.++|+||||+++|+|++|..|+........ ........... ..+..++.++.++|.+||+.+|..|||
T Consensus 188 ~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt 263 (286)
T cd06614 188 IKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRA----LFLITTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPS 263 (286)
T ss_pred hcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHhcCCCCCcchhhCCHHHHHHHHHHhccChhhCcC
Confidence 9888899999999999999999999988764321111 11111111111 112235678999999999999999999
Q ss_pred HHHHHHHHHh
Q 014484 235 AKSLVISLMS 244 (423)
Q Consensus 235 ~~~vl~~l~~ 244 (423)
+.+++.+..-
T Consensus 264 ~~~il~~~~~ 273 (286)
T cd06614 264 AEELLQHPFL 273 (286)
T ss_pred HHHHhhChHh
Confidence 9999987544
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-36 Score=277.62 Aligned_cols=234 Identities=16% Similarity=0.197 Sum_probs=192.3
Q ss_pred CCCCccceeeee--cceeeeeecCCC---hhhHHHHHHHHHHHhcCCCCCccceEeEEEe--CCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYE--ADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||++.+. +..++++++... ....+.+..|+++++.++||||+++++++.. +...+++|||+++++|.+
T Consensus 11 g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e~~~~~~L~~ 90 (265)
T cd08217 11 GSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQ 90 (265)
T ss_pred CCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEehhccCCCHHH
Confidence 899999999874 566777766432 3345678899999999999999999998864 345789999999999999
Q ss_pred hhccC--CCCCCCHHHHHHHHHHHHHHHHHHH-----cCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC----c
Q 014484 75 HLFHW--ETQPMKWAMRLRVALYLAQALEYCS-----SKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK----S 143 (423)
Q Consensus 75 ~i~~~--~~~~~~~~~~~~i~~qi~~~l~~lH-----~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~----~ 143 (423)
++... ....+++..++.++.|++.||.+|| +.+ ++|+||+|+||+++.++.++|+|||++....... .
T Consensus 91 ~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~-i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~ 169 (265)
T cd08217 91 LIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNT-VLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFAKT 169 (265)
T ss_pred HHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCc-ceecCCCHHHEEEecCCCEEEecccccccccCCcccccc
Confidence 98642 2457999999999999999999999 888 9999999999999999999999999988765433 3
Q ss_pred cccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHH
Q 014484 144 YSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASR 223 (423)
Q Consensus 144 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 223 (423)
..++..|+|||.+.+..++.++|+||||+++++|++|..|+...... .....+........+...+.++.+++.+
T Consensus 170 ~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 244 (265)
T cd08217 170 YVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQL-----QLASKIKEGKFRRIPYRYSSELNEVIKS 244 (265)
T ss_pred cccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHH-----HHHHHHhcCCCCCCccccCHHHHHHHHH
Confidence 46788999999998888999999999999999999999887654211 1222222223334555677899999999
Q ss_pred hcccCcCCCCCHHHHHHH
Q 014484 224 CLQSEARERPNAKSLVIS 241 (423)
Q Consensus 224 cl~~dp~~Rps~~~vl~~ 241 (423)
||+.+|++||++.+|++|
T Consensus 245 ~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 245 MLNVDPDKRPSTEELLQL 262 (265)
T ss_pred HccCCcccCCCHHHHhhC
Confidence 999999999999999976
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=278.93 Aligned_cols=231 Identities=13% Similarity=0.165 Sum_probs=184.9
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
|+||.||.+... +..++++.+....... .|+.....+ +||||+++++++..++..++||||+++++|.+++..
T Consensus 27 g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~----~e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~ 102 (267)
T PHA03390 27 GKFGKVSVLKHKPTQKLFVQKIIKAKNFNA----IEPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYIKDGDLFDLLKK 102 (267)
T ss_pred CCceEEEEEEEcCCCcEEEEEEEehhhcch----hhHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEcCCCCcHHHHHHh
Confidence 889999998864 5666777665433221 122222222 799999999999999999999999999999999964
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCC-CeEEccccccccCCCCCccccCcccCCccccc
Q 014484 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG-NPRLSSFGLMKNSRDGKSYSTNLAFTPPEYMR 157 (423)
Q Consensus 79 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~-~~kl~Dfg~~~~~~~~~~~~~t~~y~aPE~~~ 157 (423)
...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++ .++|+|||+++.........++..|+|||++.
T Consensus 103 --~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~y~aPE~~~ 179 (267)
T PHA03390 103 --EGKLSEAEVKKIIRQLVEALNDLHKHN-IIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTPSCYDGTLDYFSPEKIK 179 (267)
T ss_pred --cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEEeCCCCeEEEecCccceecCCCccCCCCCcccChhhhc
Confidence 347999999999999999999999999 99999999999999988 99999999998777666677899999999999
Q ss_pred cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCC-HH
Q 014484 158 TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN-AK 236 (423)
Q Consensus 158 ~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps-~~ 236 (423)
+..++.++|+||+|+++|+|++|..||............+..... .....+...++.+.++|.+||+.||.+||+ ++
T Consensus 180 ~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~ 257 (267)
T PHA03390 180 GHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQ--KKLPFIKNVSKNANDFVQSMLKYNINYRLTNYN 257 (267)
T ss_pred CCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhc--ccCCcccccCHHHHHHHHHHhccChhhCCchHH
Confidence 888999999999999999999999888643222211122222221 111233457789999999999999999995 69
Q ss_pred HHHHH
Q 014484 237 SLVIS 241 (423)
Q Consensus 237 ~vl~~ 241 (423)
++++|
T Consensus 258 ~~l~h 262 (267)
T PHA03390 258 EIIKH 262 (267)
T ss_pred HHhcC
Confidence 99876
|
|
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-36 Score=276.72 Aligned_cols=238 Identities=18% Similarity=0.232 Sum_probs=186.9
Q ss_pred CCCCccceeeee-----cceeeeeecCCC---hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCC------ceeEEEecC
Q 014484 2 GGRCSKFSICWF-----HCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEAD------ERLLVAEFM 67 (423)
Q Consensus 2 G~~g~v~~~~~~-----~~~~~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------~~~lv~e~~ 67 (423)
|+||.||.+.+. +..+++|++... ....+.+.+|+++++.++||||+++++++.... ..+++++|+
T Consensus 10 g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (273)
T cd05074 10 GEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPIPMVILPFM 89 (273)
T ss_pred CCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccceEEEEecC
Confidence 899999999863 466787777553 234567889999999999999999999987643 236889999
Q ss_pred CCCCHHhhhccC----CCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC-
Q 014484 68 PNETLAKHLFHW----ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK- 142 (423)
Q Consensus 68 ~~~~L~~~i~~~----~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~- 142 (423)
.+|+|.+++... ....+++..+..++.|++.||.|||+++ ++||||||+||+++.++.++|+|||+++......
T Consensus 90 ~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~ 168 (273)
T cd05074 90 KHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN-FIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDY 168 (273)
T ss_pred CCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-EeecccchhhEEEcCCCCEEECcccccccccCCcc
Confidence 999998887421 1235789999999999999999999999 9999999999999999999999999988654321
Q ss_pred -----ccccCcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHH
Q 014484 143 -----SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTE 216 (423)
Q Consensus 143 -----~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (423)
...++..|++||.+.+..++.++|||||||++|+|++ |.+|+...... ..............+...+..
T Consensus 169 ~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 243 (273)
T cd05074 169 YRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENS-----EIYNYLIKGNRLKQPPDCLED 243 (273)
T ss_pred eecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHH-----HHHHHHHcCCcCCCCCCCCHH
Confidence 2234568999999988889999999999999999999 77666543211 111111111111233445678
Q ss_pred HHHHHHHhcccCcCCCCCHHHHHHHHHhh
Q 014484 217 LVRLASRCLQSEARERPNAKSLVISLMSL 245 (423)
Q Consensus 217 l~~li~~cl~~dp~~Rps~~~vl~~l~~~ 245 (423)
+.+++.+||+.+|++|||+.+++..|+.+
T Consensus 244 ~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 244 VYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 99999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-36 Score=280.63 Aligned_cols=236 Identities=14% Similarity=0.178 Sum_probs=185.7
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHHhcC-CCCCccceEeEEE-----eCCceeEEEecCCCCCHH
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNL-RSERLANLIGCCY-----EADERLLVAEFMPNETLA 73 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~-----~~~~~~lv~e~~~~~~L~ 73 (423)
|+||.||++... +..+++|++.........+.+|+.++..+ +||||+++++++. .++..++||||++|++|.
T Consensus 29 g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~ 108 (286)
T cd06638 29 GTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVT 108 (286)
T ss_pred CCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEEEEEeecCCCCHH
Confidence 889999998774 56677777665444456788899999999 7999999999885 345689999999999999
Q ss_pred hhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccC
Q 014484 74 KHLFH--WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTN 147 (423)
Q Consensus 74 ~~i~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t 147 (423)
+++.. .....+++..+..++.|++.||.|||+++ ++||||||+||+++.++.++|+|||+++..... ....++
T Consensus 109 ~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 187 (286)
T cd06638 109 DLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNK-TIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGT 187 (286)
T ss_pred HHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCC-ccccCCCHHhEEECCCCCEEEccCCceeecccCCCccccccCC
Confidence 98742 12456899999999999999999999999 999999999999999999999999998765432 234578
Q ss_pred cccCCcccccc-----CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhcccc-ccCCCChhHHHHHHHHH
Q 014484 148 LAFTPPEYMRT-----GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSA-LEGHFSNDEGTELVRLA 221 (423)
Q Consensus 148 ~~y~aPE~~~~-----~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li 221 (423)
+.|+|||.+.. ..++.++||||+||++|+|++|..|+...... .......... .....+..++.++.+++
T Consensus 188 ~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~li 263 (286)
T cd06638 188 PFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPM----RALFKIPRNPPPTLHQPELWSNEFNDFI 263 (286)
T ss_pred CcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchh----HHHhhccccCCCcccCCCCcCHHHHHHH
Confidence 99999998753 44788999999999999999999887643111 1111111100 01112233467899999
Q ss_pred HHhcccCcCCCCCHHHHHHHH
Q 014484 222 SRCLQSEARERPNAKSLVISL 242 (423)
Q Consensus 222 ~~cl~~dp~~Rps~~~vl~~l 242 (423)
.+||+.||++|||+.++++++
T Consensus 264 ~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 264 RKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred HHHccCCcccCCCHHHHhhcc
Confidence 999999999999999999875
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=284.17 Aligned_cols=239 Identities=15% Similarity=0.227 Sum_probs=186.3
Q ss_pred CCCCccceeeee--cceeeeeecCCCh--hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~ 77 (423)
|+||.||.+.+. +..+++|.+.... .....+.+|+.+++.++||||+++++++...+..++||||+.+ +|.+++.
T Consensus 17 g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~ 95 (301)
T cd07873 17 GTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLD 95 (301)
T ss_pred CcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEecccc-CHHHHHH
Confidence 899999999874 5667777664332 2345677899999999999999999999999999999999975 8988885
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccCCc
Q 014484 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPP 153 (423)
Q Consensus 78 ~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~aP 153 (423)
+ .+..+++..+..++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||++...... ....+++.|+||
T Consensus 96 ~-~~~~~~~~~~~~~~~qi~~aL~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~P 173 (301)
T cd07873 96 D-CGNSINMHNVKLFLFQLLRGLNYCHRRK-VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSNEVVTLWYRPP 173 (301)
T ss_pred h-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCcccccceeecccCc
Confidence 4 3456899999999999999999999999 999999999999999999999999998754322 223468899999
Q ss_pred cccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhc-----------hhhhhccc---------cccC----C
Q 014484 154 EYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSK-----------NFLLLMDS---------ALEG----H 208 (423)
Q Consensus 154 E~~~~~-~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~-----------~~~~~~~~---------~~~~----~ 208 (423)
|.+.+. .++.++|||||||++|+|++|.+||........... .+...... .... .
T Consensus 174 E~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (301)
T cd07873 174 DILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHN 253 (301)
T ss_pred HHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHh
Confidence 988754 478899999999999999999988865422111000 00000000 0000 0
Q ss_pred CChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 209 FSNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 209 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
....+++++.++|.+||+.||.+|||++++++|.+
T Consensus 254 ~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~ 288 (301)
T cd07873 254 HAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPY 288 (301)
T ss_pred hcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcc
Confidence 11235678999999999999999999999998754
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-36 Score=278.51 Aligned_cols=236 Identities=16% Similarity=0.221 Sum_probs=190.9
Q ss_pred CCCCccceeee--ecceeeeeecCCCh-------hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICW--FHCHLKSSVLESSD-------LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~--~~~~~~~~~~~~~~-------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 72 (423)
|++|.||.+.. .+..+++|++.... .....+.+|+++++.++|+||+++++++.+.+..++||||++|++|
T Consensus 11 g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v~e~~~~~~L 90 (268)
T cd06630 11 GAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLFVEWMAGGSV 90 (268)
T ss_pred cCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEEEeccCCCcH
Confidence 88999999876 35667777664322 1346788999999999999999999999999999999999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCC-CeEEccccccccCCCC--------Cc
Q 014484 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG-NPRLSSFGLMKNSRDG--------KS 143 (423)
Q Consensus 73 ~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~-~~kl~Dfg~~~~~~~~--------~~ 143 (423)
.+++.+ .+++++..+..++.|++.||.|||+++ ++|+||+|+||+++.++ .++|+|||++...... ..
T Consensus 91 ~~~l~~--~~~~~~~~~~~~~~ql~~al~~LH~~~-i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 167 (268)
T cd06630 91 SHLLSK--YGAFKEAVIINYTEQLLRGLSYLHENQ-IIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQ 167 (268)
T ss_pred HHHHHH--hCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEEcccccccccccccccCCccccc
Confidence 999864 457899999999999999999999999 99999999999998776 5899999998765432 12
Q ss_pred cccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHH
Q 014484 144 YSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASR 223 (423)
Q Consensus 144 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 223 (423)
..++..|+|||.+.+..++.++|+||+||++++|++|..||......... ...............+...++++.+++.+
T Consensus 168 ~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 246 (268)
T cd06630 168 LLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHL-ALIFKIASATTAPSIPEHLSPGLRDVTLR 246 (268)
T ss_pred cccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchH-HHHHHHhccCCCCCCchhhCHHHHHHHHH
Confidence 35678999999998888999999999999999999999887543211110 11111111222344555677899999999
Q ss_pred hcccCcCCCCCHHHHHHH
Q 014484 224 CLQSEARERPNAKSLVIS 241 (423)
Q Consensus 224 cl~~dp~~Rps~~~vl~~ 241 (423)
||+.+|++|||+.++++|
T Consensus 247 ~l~~~p~~R~~~~~ll~~ 264 (268)
T cd06630 247 CLELQPEDRPPSRELLKH 264 (268)
T ss_pred HcCCCcccCcCHHHHhcC
Confidence 999999999999999876
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-37 Score=292.58 Aligned_cols=234 Identities=17% Similarity=0.179 Sum_probs=190.1
Q ss_pred CCCCccceeeee--cceeee-----eecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCc--eeEEEecCCCCCH
Q 014484 2 GGRCSKFSICWF--HCHLKS-----SVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADE--RLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~-----~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~--~~lv~e~~~~~~L 72 (423)
|+|-+||++.+. +..|+- .-+.......++|..|+.+|+.|+||||+++|.+|.+... +-+|+|++..|+|
T Consensus 51 GafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL~TSGtL 130 (632)
T KOG0584|consen 51 GAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITELFTSGTL 130 (632)
T ss_pred ccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeecccCCcH
Confidence 788889998874 433332 2334444456789999999999999999999999998766 6799999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCC-eeeccCCCCCeeecC-CCCeEEccccccccCCCC--CccccCc
Q 014484 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGR-ALYHDLNAYRILFDK-DGNPRLSSFGLMKNSRDG--KSYSTNL 148 (423)
Q Consensus 73 ~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~-iiH~dlkp~Nill~~-~~~~kl~Dfg~~~~~~~~--~~~~~t~ 148 (423)
..|+++ .+.++...+..|++||++||.|||++.| |||||||-+||+|+. .|.+||+|+|||...... ....|||
T Consensus 131 r~Y~kk--~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~aksvIGTP 208 (632)
T KOG0584|consen 131 REYRKK--HRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHAKSVIGTP 208 (632)
T ss_pred HHHHHH--hccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhccccceeccCc
Confidence 999975 6678899999999999999999999865 999999999999965 489999999999877654 4468999
Q ss_pred ccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccC
Q 014484 149 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSE 228 (423)
Q Consensus 149 ~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 228 (423)
.|||||.+- ..|+...|||||||.++||+|+..|+...........++...+.+. .+..--.+++++||.+||..
T Consensus 209 EFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~---sl~kV~dPevr~fIekCl~~- 283 (632)
T KOG0584|consen 209 EFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPA---ALSKVKDPEVREFIEKCLAT- 283 (632)
T ss_pred cccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHH---HhhccCCHHHHHHHHHHhcC-
Confidence 999999987 8899999999999999999999999887643333233332222221 12222247899999999999
Q ss_pred cCCCCCHHHHHHHH
Q 014484 229 ARERPNAKSLVISL 242 (423)
Q Consensus 229 p~~Rps~~~vl~~l 242 (423)
...|||+.|+|.+-
T Consensus 284 ~~~R~sa~eLL~d~ 297 (632)
T KOG0584|consen 284 KSERLSAKELLKDP 297 (632)
T ss_pred chhccCHHHHhhCh
Confidence 99999999999874
|
|
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=281.53 Aligned_cols=236 Identities=18% Similarity=0.227 Sum_probs=186.6
Q ss_pred CCCCccceeeee--cceeeeeecCCCh---hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
|+||.||++.+. +..+++|++.... ...+.+.+|++++++++||||+++++++..+...++||||+++++|..++
T Consensus 12 g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~ 91 (286)
T cd07847 12 GSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEYCDHTVLNELE 91 (286)
T ss_pred cCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEeccCccHHHHHH
Confidence 789999999885 5677777764432 22456789999999999999999999999999999999999998888877
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC----ccccCcccCC
Q 014484 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK----SYSTNLAFTP 152 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~----~~~~t~~y~a 152 (423)
.. ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++....... ...++..|+|
T Consensus 92 ~~--~~~~~~~~~~~~~~ql~~~l~~LH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~a 168 (286)
T cd07847 92 KN--PRGVPEHLIKKIIWQTLQAVNFCHKHN-CIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYTDYVATRWYRA 168 (286)
T ss_pred hC--CCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCChhhEEEcCCCcEEECccccceecCCCcccccCcccccccCC
Confidence 43 346899999999999999999999999 9999999999999999999999999988665433 3456789999
Q ss_pred cccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhh-----------c----------cccccCC--
Q 014484 153 PEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLL-----------M----------DSALEGH-- 208 (423)
Q Consensus 153 PE~~~~-~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~-----------~----------~~~~~~~-- 208 (423)
||.+.+ ..++.++|+||||+++|+|++|..||.......... ..... . .+.....
T Consensus 169 PE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (286)
T cd07847 169 PELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLY-LIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREP 247 (286)
T ss_pred HHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHH-HHHHHhCCCChHHhhhcccccccccccCCCcccccC
Confidence 999876 457899999999999999999998886532111000 00000 0 0000000
Q ss_pred ---CChhHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014484 209 ---FSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (423)
Q Consensus 209 ---~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~ 241 (423)
.....+..+.+++.+||+.||++|||+.+++.|
T Consensus 248 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~ 283 (286)
T cd07847 248 LESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH 283 (286)
T ss_pred HHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence 011346789999999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-37 Score=284.92 Aligned_cols=237 Identities=17% Similarity=0.154 Sum_probs=183.9
Q ss_pred CCCCccceeeee--cceeeeeecCCChh---hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDL---GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
|+||.||++.+. +..+++|.+..... ....+.+|++++++++||||+++++++.+....++|+||+.+ +|.+++
T Consensus 11 g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~ 89 (284)
T cd07839 11 GTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYCDQ-DLKKYF 89 (284)
T ss_pred cCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecCCC-CHHHHH
Confidence 889999999884 66677777654321 234677899999999999999999999999999999999975 888877
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC----ccccCcccCC
Q 014484 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK----SYSTNLAFTP 152 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~----~~~~t~~y~a 152 (423)
.. ....+++..+..++.||+.||.|||+++ ++||||||+||+++.++.++|+|||+++...... ...++..|+|
T Consensus 90 ~~-~~~~~~~~~~~~~~~qi~~al~~LH~~~-i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~a 167 (284)
T cd07839 90 DS-CNGDIDPEIVKSFMFQLLKGLAFCHSHN-VLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSAEVVTLWYRP 167 (284)
T ss_pred Hh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcCCCccccCCcC
Confidence 54 2456999999999999999999999999 9999999999999999999999999987654332 2346789999
Q ss_pred ccccccCC-CCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhh---------------hhccccccC---------
Q 014484 153 PEYMRTGR-VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFL---------------LLMDSALEG--------- 207 (423)
Q Consensus 153 PE~~~~~~-~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~--------- 207 (423)
||.+.+.. ++.++|||||||++|+|+||..|+.............. .........
T Consensus 168 PE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (284)
T cd07839 168 PDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLV 247 (284)
T ss_pred hHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhh
Confidence 99887654 78999999999999999999877533211100000000 000000000
Q ss_pred CCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014484 208 HFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (423)
Q Consensus 208 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~ 241 (423)
...+.+++++.++|.+||+.||.+|||+++++.|
T Consensus 248 ~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h 281 (284)
T cd07839 248 NVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH 281 (284)
T ss_pred hhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence 1112356789999999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=282.37 Aligned_cols=237 Identities=17% Similarity=0.253 Sum_probs=186.2
Q ss_pred CCCCccceeeee--cceeeeeecCCC--hhhHHHHHHHHHHHhcCC-CCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS--DLGETLNLEEAKAVGNLR-SERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
|+||.||.+.+. +..+++|.+... ......+.+|+.++.++. |+||+++++++..++..+++|||+.+ +|.++.
T Consensus 15 G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~~~-~l~~l~ 93 (288)
T cd06616 15 GAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELMDI-SLDKFY 93 (288)
T ss_pred CCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEecccC-CHHHHH
Confidence 899999998875 566777766543 234567889999999995 99999999999999999999999865 655433
Q ss_pred ---ccCCCCCCCHHHHHHHHHHHHHHHHHHHcC-CCeeeccCCCCCeeecCCCCeEEccccccccCCCC---CccccCcc
Q 014484 77 ---FHWETQPMKWAMRLRVALYLAQALEYCSSK-GRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLA 149 (423)
Q Consensus 77 ---~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~~t~~ 149 (423)
.....+.+++..+..++.|++.||+|||+. + ++||||||+||+++.++.++|+|||+++..... ....+++.
T Consensus 94 ~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~ 172 (288)
T cd06616 94 KYVYEVLKSVIPEEILGKIAVATVKALNYLKEELK-IIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIAKTRDAGCRP 172 (288)
T ss_pred HHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCC-eeccCCCHHHEEEccCCcEEEeecchhHHhccCCccccccCccC
Confidence 222346799999999999999999999975 7 999999999999999999999999998754432 33457889
Q ss_pred cCCccccccC---CCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhc---cccccCCCChhHHHHHHHHHHH
Q 014484 150 FTPPEYMRTG---RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLM---DSALEGHFSNDEGTELVRLASR 223 (423)
Q Consensus 150 y~aPE~~~~~---~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~li~~ 223 (423)
|+|||.+.+. .++.++|||||||++|+|++|..||...... . ....... .+......+..++.++.+++.+
T Consensus 173 y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 249 (288)
T cd06616 173 YMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSV-F--DQLTQVVKGDPPILSNSEEREFSPSFVNFINL 249 (288)
T ss_pred ccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchH-H--HHHhhhcCCCCCcCCCcCCCccCHHHHHHHHH
Confidence 9999998766 6899999999999999999999887653210 0 1111111 1112222223467889999999
Q ss_pred hcccCcCCCCCHHHHHHHHH
Q 014484 224 CLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 224 cl~~dp~~Rps~~~vl~~l~ 243 (423)
||+.||++|||+++++.+-.
T Consensus 250 ~l~~~p~~Rpt~~~i~~~~~ 269 (288)
T cd06616 250 CLIKDESKRPKYKELLEHPF 269 (288)
T ss_pred HccCChhhCcCHHHHhcChh
Confidence 99999999999999998743
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-36 Score=285.29 Aligned_cols=243 Identities=16% Similarity=0.155 Sum_probs=188.3
Q ss_pred CCCCccceeee--ecceeeeeecCCCh---hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICW--FHCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~--~~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
|+||.||.+.+ .+..+++|++.... ...+.+.+|+.+++.++||||++++++|..++..++||||+.+++|.+++
T Consensus 11 ~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~~l~~~l 90 (328)
T cd08226 11 CNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYGSANSLL 90 (328)
T ss_pred cCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCCCHHHHH
Confidence 58889999987 47788888875433 23467889999999999999999999999999999999999999999998
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-----------Cccc
Q 014484 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----------KSYS 145 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-----------~~~~ 145 (423)
.......+++..+..++.|++.||.|||+++ ++||||||+||+++.++.++++||+.+...... ....
T Consensus 91 ~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~-ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (328)
T cd08226 91 KTYFPEGMSEALIGNILFGALRGLNYLHQNG-YIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFST 169 (328)
T ss_pred HhhcccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccccccccccccc
Confidence 7544456899999999999999999999999 999999999999999999999999754322111 1112
Q ss_pred cCcccCCccccccC--CCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhh-------------------------
Q 014484 146 TNLAFTPPEYMRTG--RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFL------------------------- 198 (423)
Q Consensus 146 ~t~~y~aPE~~~~~--~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~------------------------- 198 (423)
++..|+|||++.+. .++.++|||||||++|+|++|..||..............
T Consensus 170 ~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (328)
T cd08226 170 SVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSG 249 (328)
T ss_pred CccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhh
Confidence 45679999998764 478999999999999999999988865321111000000
Q ss_pred ----------------hhccccccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhh
Q 014484 199 ----------------LLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 245 (423)
Q Consensus 199 ----------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~ 245 (423)
...........+..++..+.+|+.+||+.||++|||++++++|..-.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~ 312 (328)
T cd08226 250 VDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFK 312 (328)
T ss_pred hhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHH
Confidence 00000111112234678899999999999999999999999886543
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-36 Score=280.06 Aligned_cols=237 Identities=19% Similarity=0.201 Sum_probs=186.0
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhc---CCCCCccceEeEEEeCCceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGN---LRSERLANLIGCCYEADERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~---l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 72 (423)
|+||.||.+.+. +..+++|.+.... .....+.+|..++.. .+||||+.+++++..++..++||||++|++|
T Consensus 5 G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 84 (279)
T cd05633 5 GGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMNGGDL 84 (279)
T ss_pred CCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCCCCCH
Confidence 899999998874 5677777664432 122334455544443 4799999999999999999999999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC--CccccCccc
Q 014484 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTNLAF 150 (423)
Q Consensus 73 ~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--~~~~~t~~y 150 (423)
.+++.. .+.+++..+..++.|++.||.|||+++ ++||||||+||+++.++.++|+|||++...... ....++..|
T Consensus 85 ~~~i~~--~~~l~~~~~~~i~~qi~~al~~lH~~~-ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y 161 (279)
T cd05633 85 HYHLSQ--HGVFSEKEMRFYATEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGY 161 (279)
T ss_pred HHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cCCCCCCHHHEEECCCCCEEEccCCcceeccccCccCcCCCcCc
Confidence 998853 456999999999999999999999999 999999999999999999999999998755432 234688999
Q ss_pred CCcccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCc
Q 014484 151 TPPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEA 229 (423)
Q Consensus 151 ~aPE~~~~-~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 229 (423)
+|||.+.+ ..++.++|+||+||++|+|++|..||......... .... .........+...+.++.++|.+||..||
T Consensus 162 ~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~p 238 (279)
T cd05633 162 MAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH--EIDR-MTLTVNVELPDSFSPELKSLLEGLLQRDV 238 (279)
T ss_pred cCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHH--HHHH-HhhcCCcCCccccCHHHHHHHHHHhcCCH
Confidence 99998864 55899999999999999999999988643211111 1111 11122233455677899999999999999
Q ss_pred CCCC-----CHHHHHHHHHh
Q 014484 230 RERP-----NAKSLVISLMS 244 (423)
Q Consensus 230 ~~Rp-----s~~~vl~~l~~ 244 (423)
++|| |++++++|...
T Consensus 239 ~~R~~~~~~~~~~~~~h~~~ 258 (279)
T cd05633 239 SKRLGCLGRGAQEVKEHVFF 258 (279)
T ss_pred HHhcCCCCCCHHHHHhCccc
Confidence 9999 69999988544
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-36 Score=282.22 Aligned_cols=233 Identities=15% Similarity=0.117 Sum_probs=185.9
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||++.+. +..+++|.+.... .....+.+|+++++.++||||+++++.+..++..++||||++|++|.++
T Consensus 12 g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~ 91 (305)
T cd05609 12 GAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVMEYVEGGDCATL 91 (305)
T ss_pred CCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEecCCCCcHHHH
Confidence 899999998875 4567777765443 2345778999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC--------------
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-------------- 141 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-------------- 141 (423)
+.. .+.+++..+..++.|++.||.|||+++ ++||||||+||+++.++.++|+|||+++.....
T Consensus 92 l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~ 168 (305)
T cd05609 92 LKN--IGALPVDMARMYFAETVLALEYLHNYG-IVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDT 168 (305)
T ss_pred HHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCchHHEEECCCCCEEEeeCCCccccCcCccccccccccccch
Confidence 964 356899999999999999999999999 999999999999999999999999987632100
Q ss_pred -----CccccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccc-cCCCChhHHH
Q 014484 142 -----KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSAL-EGHFSNDEGT 215 (423)
Q Consensus 142 -----~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 215 (423)
....++..|+|||.+.+..++.++|+|||||++|+|++|..||.+........ ....... ........+.
T Consensus 169 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 244 (305)
T cd05609 169 REFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFG----QVISDDIEWPEGDEALPA 244 (305)
T ss_pred hhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH----HHHhcccCCCCccccCCH
Confidence 11346778999999988889999999999999999999999887542221111 1111111 1111224577
Q ss_pred HHHHHHHHhcccCcCCCCCH---HHHHHH
Q 014484 216 ELVRLASRCLQSEARERPNA---KSLVIS 241 (423)
Q Consensus 216 ~l~~li~~cl~~dp~~Rps~---~~vl~~ 241 (423)
++.+++.+||+.||++||+. .+++.+
T Consensus 245 ~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 245 DAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred HHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 89999999999999999984 555555
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-36 Score=276.89 Aligned_cols=234 Identities=16% Similarity=0.225 Sum_probs=191.7
Q ss_pred CCCCccceeeee--cceeeeeecCCCh---hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
|+||.||++.+. +..+++|.+.... .....+.+|+.+++.++|+||+++++.+..+...++|+||+++++|.+++
T Consensus 11 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~ 90 (257)
T cd08225 11 GSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYCDGGDLMKRI 90 (257)
T ss_pred CCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecCCCCcHHHHH
Confidence 789999999985 5667777764432 34557789999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCC-eEEccccccccCCCCC----ccccCcccC
Q 014484 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGN-PRLSSFGLMKNSRDGK----SYSTNLAFT 151 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~-~kl~Dfg~~~~~~~~~----~~~~t~~y~ 151 (423)
.+..+..+++..+..++.|++.||.|||+++ ++|+||||+||++++++. ++|+|||.+....... ...+++.|+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 169 (257)
T cd08225 91 NRQRGVLFSEDQILSWFVQISLGLKHIHDRK-ILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAYTCVGTPYYL 169 (257)
T ss_pred HhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCCHHHEEEcCCCCeEEecccccchhccCCcccccccCCCcccc
Confidence 6544556899999999999999999999999 999999999999988864 6999999987655432 235788999
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCC
Q 014484 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARE 231 (423)
Q Consensus 152 aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (423)
|||.+.+..++.++|+||||+++++|++|..|+........ ....... .....+...+.++.+++.+||..+|++
T Consensus 170 ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~ 244 (257)
T cd08225 170 SPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQL----VLKICQG-YFAPISPNFSRDLRSLISQLFKVSPRD 244 (257)
T ss_pred CHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHH----HHHHhcc-cCCCCCCCCCHHHHHHHHHHhccChhh
Confidence 99999888899999999999999999999988765322111 1111111 122233456778999999999999999
Q ss_pred CCCHHHHHHH
Q 014484 232 RPNAKSLVIS 241 (423)
Q Consensus 232 Rps~~~vl~~ 241 (423)
|||+.+++.+
T Consensus 245 Rpt~~~ll~~ 254 (257)
T cd08225 245 RPSITSILKR 254 (257)
T ss_pred CcCHHHHhhC
Confidence 9999999876
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-36 Score=275.53 Aligned_cols=236 Identities=18% Similarity=0.148 Sum_probs=186.7
Q ss_pred CCCCccceeeee--cceeeeeecCCChh----hHHHHHHHHHHH-hcCCCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDL----GETLNLEEAKAV-GNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~----~~~~~~~E~~~l-~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||++.+. +..+++|++..... ....+..|..++ ...+|+||+++++++..++..++||||++|++|.+
T Consensus 7 g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 86 (260)
T cd05611 7 GAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNGGDCAS 86 (260)
T ss_pred CCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCCCCHHH
Confidence 899999999884 56788887765432 122344555444 45589999999999999999999999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCCccccCcccCCcc
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPE 154 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~t~~y~aPE 154 (423)
++.. .+.+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||+++.........++..|++||
T Consensus 87 ~l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~y~~pe 163 (260)
T cd05611 87 LIKT--LGGLPEDWAKQYIAEVVLGVEDLHQRG-IIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFVGTPDYLAPE 163 (260)
T ss_pred HHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCcEEEeecccceeccccccCCCCcCccChh
Confidence 9854 356899999999999999999999999 9999999999999999999999999988766656667889999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCC
Q 014484 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (423)
Q Consensus 155 ~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (423)
.+.+..++.++||||||+++|+|++|..||............. .............+++++.+++.+||+.||++||+
T Consensus 164 ~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~ 241 (260)
T cd05611 164 TILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNIL--SRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLG 241 (260)
T ss_pred hhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH--hcccCCCCcccccCCHHHHHHHHHHccCCHHHccC
Confidence 9988888999999999999999999998886542221111100 00111111223346788999999999999999995
Q ss_pred H---HHHHHHH
Q 014484 235 A---KSLVISL 242 (423)
Q Consensus 235 ~---~~vl~~l 242 (423)
+ ++++.|.
T Consensus 242 ~~~~~~~l~~~ 252 (260)
T cd05611 242 ANGYQEIKSHP 252 (260)
T ss_pred CCcHHHHHcCh
Confidence 5 5666553
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-36 Score=275.47 Aligned_cols=237 Identities=16% Similarity=0.229 Sum_probs=187.7
Q ss_pred CCCCccceeeeec---ceeeeeecCC-----------ChhhHHHHHHHHHHHhc-CCCCCccceEeEEEeCCceeEEEec
Q 014484 2 GGRCSKFSICWFH---CHLKSSVLES-----------SDLGETLNLEEAKAVGN-LRSERLANLIGCCYEADERLLVAEF 66 (423)
Q Consensus 2 G~~g~v~~~~~~~---~~~~~~~~~~-----------~~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~lv~e~ 66 (423)
|+||.||.+.+.. ..+++|.+.. .......+..|+.++.+ ++||||+++++++..++..++||||
T Consensus 11 G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~ 90 (269)
T cd08528 11 GAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLENDRLYIVMDL 90 (269)
T ss_pred CCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccCCeEEEEEec
Confidence 8999999999854 5566665432 12234457789998875 6999999999999999999999999
Q ss_pred CCCCCHHhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHHc-CCCeeeccCCCCCeeecCCCCeEEccccccccCCCC--
Q 014484 67 MPNETLAKHLFH--WETQPMKWAMRLRVALYLAQALEYCSS-KGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-- 141 (423)
Q Consensus 67 ~~~~~L~~~i~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-- 141 (423)
++|++|.+++.. .....+++..++.++.|++.||.|||+ .+ ++|+||+|+||+++.++.++|+|||++......
T Consensus 91 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~-i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~ 169 (269)
T cd08528 91 IEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKR-IVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPESK 169 (269)
T ss_pred CCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCc-eeecCCCHHHEEECCCCcEEEecccceeecccccc
Confidence 999999988742 234569999999999999999999996 67 999999999999999999999999998765544
Q ss_pred -CccccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHH
Q 014484 142 -KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRL 220 (423)
Q Consensus 142 -~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 220 (423)
....++..|++||.+.+..++.++|+||||+++|+|++|..|+........ .................++++.++
T Consensus 170 ~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~l 245 (269)
T cd08528 170 LTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSL----ATKIVEAVYEPLPEGMYSEDVTDV 245 (269)
T ss_pred cccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHH----HHHHhhccCCcCCcccCCHHHHHH
Confidence 234578899999999988899999999999999999999988754311111 111111111111122456789999
Q ss_pred HHHhcccCcCCCCCHHHHHHHHH
Q 014484 221 ASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 221 i~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
+.+||+.||++||++.++..++.
T Consensus 246 i~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 246 ITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred HHHHCCCCCccCCCHHHHHHHhc
Confidence 99999999999999999998864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-36 Score=278.78 Aligned_cols=235 Identities=15% Similarity=0.162 Sum_probs=186.4
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHHhcC-CCCCccceEeEEEeCC-----ceeEEEecCCCCCHH
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNL-RSERLANLIGCCYEAD-----ERLLVAEFMPNETLA 73 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~-----~~~lv~e~~~~~~L~ 73 (423)
|+||.||++... +..+++|++.........+.+|+.++.++ +||||+++++++...+ ..++||||++|++|.
T Consensus 33 g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~ 112 (291)
T cd06639 33 GTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVT 112 (291)
T ss_pred CCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeEEEEEECCCCcHH
Confidence 789999998874 56677787765544556778899999999 8999999999997643 479999999999999
Q ss_pred hhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccC
Q 014484 74 KHLFH--WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTN 147 (423)
Q Consensus 74 ~~i~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t 147 (423)
+++.. ..+..+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++...... ....++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 191 (291)
T cd06639 113 ELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNR-IIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGT 191 (291)
T ss_pred HHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHEEEcCCCCEEEeecccchhcccccccccCccCC
Confidence 98752 13456899999999999999999999999 999999999999999999999999998765432 234578
Q ss_pred cccCCccccccC-----CCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccc-cccCCCChhHHHHHHHHH
Q 014484 148 LAFTPPEYMRTG-----RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS-ALEGHFSNDEGTELVRLA 221 (423)
Q Consensus 148 ~~y~aPE~~~~~-----~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li 221 (423)
..|+|||.+... .++.++|||||||++|+|++|..|+...... ......... ......+...+.++.++|
T Consensus 192 ~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~li 267 (291)
T cd06639 192 PFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPV----KTLFKIPRNPPPTLLHPEKWCRSFNHFI 267 (291)
T ss_pred ccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHH----HHHHHHhcCCCCCCCcccccCHHHHHHH
Confidence 899999987643 3688999999999999999999887653211 111111111 111112334567899999
Q ss_pred HHhcccCcCCCCCHHHHHHH
Q 014484 222 SRCLQSEARERPNAKSLVIS 241 (423)
Q Consensus 222 ~~cl~~dp~~Rps~~~vl~~ 241 (423)
.+||+.+|++|||+.++++|
T Consensus 268 ~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 268 SQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred HHHhhcChhhCcCHHHHhcC
Confidence 99999999999999999977
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-36 Score=278.20 Aligned_cols=233 Identities=17% Similarity=0.210 Sum_probs=188.3
Q ss_pred CCCCccceeeee--cceeeeeecCCCh-hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
|++|.||++.+. +..+++|.+.... ...+.+.+|+.+++.++||||+++++++..++..++|+||++|++|.+++..
T Consensus 30 g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~ 109 (285)
T cd06648 30 GSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGALTDIVTH 109 (285)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCCCHHHHHHh
Confidence 889999999874 5567777654333 2345688999999999999999999999999999999999999999999853
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccCCcc
Q 014484 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPPE 154 (423)
Q Consensus 79 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~aPE 154 (423)
..+++..+..++.|++.||.+||+++ ++||||+|+||+++.++.++|+|||++...... ....++..|+|||
T Consensus 110 ---~~~~~~~~~~~~~ql~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~aPE 185 (285)
T cd06648 110 ---TRMNEEQIATVCLAVLKALSFLHAQG-VIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPE 185 (285)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCChhhEEEcCCCcEEEcccccchhhccCCcccccccCCccccCHH
Confidence 56899999999999999999999999 999999999999999999999999987654322 2345788999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCC
Q 014484 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (423)
Q Consensus 155 ~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (423)
.+.+..++.++|+||+||++++|++|..||.......... ........ ....+..++..+.+++.+||+.+|++|||
T Consensus 186 ~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~~p~~Rpt 262 (285)
T cd06648 186 VISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMK-RIRDNLPP--KLKNLHKVSPRLRSFLDRMLVRDPAQRAT 262 (285)
T ss_pred HhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHH-HHHhcCCC--CCcccccCCHHHHHHHHHHcccChhhCcC
Confidence 9988889999999999999999999998876532111111 11111111 11112235678999999999999999999
Q ss_pred HHHHHHH
Q 014484 235 AKSLVIS 241 (423)
Q Consensus 235 ~~~vl~~ 241 (423)
+.+++.+
T Consensus 263 ~~~il~~ 269 (285)
T cd06648 263 AAELLNH 269 (285)
T ss_pred HHHHccC
Confidence 9999976
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-36 Score=279.44 Aligned_cols=237 Identities=18% Similarity=0.200 Sum_probs=187.6
Q ss_pred CCCCccceeeee--cceeeeeecCCCh---hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
|+||.||++.+. +..+++|++.... .....+.+|+.+++.++||||+++++++..+...++||||+ +++|.+++
T Consensus 11 g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~ 89 (286)
T cd07832 11 GAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM-PSDLSEVL 89 (286)
T ss_pred CCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc-CCCHHHHH
Confidence 899999999874 5677777765443 23567889999999999999999999999999999999999 99999998
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC-----ccccCcccC
Q 014484 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-----SYSTNLAFT 151 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-----~~~~t~~y~ 151 (423)
.. ....+++.++..++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++....... ...++..|+
T Consensus 90 ~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~ 167 (286)
T cd07832 90 RD-EERPLPEAQVKSYMRMLLKGVAYMHANG-IMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQVATRWYR 167 (286)
T ss_pred Hh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCccccccCccccc
Confidence 64 3367999999999999999999999999 9999999999999999999999999987665432 345788999
Q ss_pred CccccccCC-CCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhcc---------------------ccc----
Q 014484 152 PPEYMRTGR-VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD---------------------SAL---- 205 (423)
Q Consensus 152 aPE~~~~~~-~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~---------------------~~~---- 205 (423)
|||.+.+.. ++.++||||+||++++|++|.+++........... ...... ...
T Consensus 168 aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (286)
T cd07832 168 APELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAI-VFRTLGTPNEETWPGLTSLPDYNKITFPESKPIP 246 (286)
T ss_pred CceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHH-HHHHcCCCChHHHhhccCcchhhcccCCCCCcch
Confidence 999887544 68999999999999999999766654321100000 000000 000
Q ss_pred cCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHH
Q 014484 206 EGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISL 242 (423)
Q Consensus 206 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l 242 (423)
.....+..+.++.++|.+||+.||.+|||+++++.|.
T Consensus 247 ~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~ 283 (286)
T cd07832 247 LEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHP 283 (286)
T ss_pred HHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCc
Confidence 0001123467899999999999999999999999873
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-36 Score=277.69 Aligned_cols=242 Identities=14% Similarity=0.190 Sum_probs=189.6
Q ss_pred CCCCccceeeee--cceeeeeecCCCh--hhHHHHHHHHHHHhcCCCCCccceEeEEEeC--CceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEA--DERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e~~~~~~L~~~ 75 (423)
|++|.||.+... +..++++.+.... .....+.+|+++++.++||||++++++|... +.+++||||++|++|.++
T Consensus 12 g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 91 (287)
T cd06621 12 GAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSI 91 (287)
T ss_pred CCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEecCCCCHHHH
Confidence 889999999984 5667777665432 3456789999999999999999999998654 368999999999999987
Q ss_pred hcc--CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC--CccccCcccC
Q 014484 76 LFH--WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTNLAFT 151 (423)
Q Consensus 76 i~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--~~~~~t~~y~ 151 (423)
+.. .....+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ....++..|+
T Consensus 92 l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~-i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~ 170 (287)
T cd06621 92 YKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK-IIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLAGTFTGTSFYM 170 (287)
T ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEecCCeEEEeeccccccccccccccccCCcccc
Confidence 642 23456899999999999999999999999 999999999999999999999999998755432 2345788999
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhh-c---cccccCCCC--hhHHHHHHHHHHHhc
Q 014484 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLL-M---DSALEGHFS--NDEGTELVRLASRCL 225 (423)
Q Consensus 152 aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~--~~~~~~l~~li~~cl 225 (423)
|||.+.+..++.++|+|||||++|+|++|..|+................ . ......... ...++.+.+++.+||
T Consensus 171 ~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 250 (287)
T cd06621 171 APERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCL 250 (287)
T ss_pred CHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCchHHHHHHHHHHHc
Confidence 9999998889999999999999999999998876541100000011111 1 111111111 235678999999999
Q ss_pred ccCcCCCCCHHHHHHHHHh
Q 014484 226 QSEARERPNAKSLVISLMS 244 (423)
Q Consensus 226 ~~dp~~Rps~~~vl~~l~~ 244 (423)
+.+|.+|||+.+++.+-.-
T Consensus 251 ~~~p~~Rpt~~eil~~~~~ 269 (287)
T cd06621 251 EKDPTRRPTPWDMLEHPWI 269 (287)
T ss_pred CCCcccCCCHHHHHhCccc
Confidence 9999999999999988543
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=302.36 Aligned_cols=215 Identities=17% Similarity=0.165 Sum_probs=164.0
Q ss_pred hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccCC---CCCCCHHHHHHHHHHHHHHHHHHH
Q 014484 28 GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE---TQPMKWAMRLRVALYLAQALEYCS 104 (423)
Q Consensus 28 ~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~---~~~~~~~~~~~i~~qi~~~l~~lH 104 (423)
....+.+|+.++..++||||+++++++...+..|+|++++.+ +|.+++.... ........+..++.||+.||.|||
T Consensus 206 ~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH 284 (501)
T PHA03210 206 AAIQLENEILALGRLNHENILKIEEILRSEANTYMITQKYDF-DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIH 284 (501)
T ss_pred HHHHHHHHHHHHHhCCCCCcCcEeEEEEECCeeEEEEecccc-CHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHH
Confidence 345678999999999999999999999999999999999955 7777764321 122346678899999999999999
Q ss_pred cCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-----CccccCcccCCccccccCCCCCCcceehhHHHHHHHhh
Q 014484 105 SKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS 179 (423)
Q Consensus 105 ~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~ 179 (423)
+++ |+||||||+|||++.++.+||+|||+++..... ....||..|+|||++.+..++.++|||||||++|||++
T Consensus 285 ~~g-IiHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~ 363 (501)
T PHA03210 285 DKK-LIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLS 363 (501)
T ss_pred hCC-eecCCCCHHHEEECCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHH
Confidence 999 999999999999999999999999999865432 23568999999999998899999999999999999999
Q ss_pred CCCCCCchhhHHh--hhchhh------------------hhcccccc----CCCC-----hhHHHHHHHHHHHhcccCcC
Q 014484 180 GKHIPPSHALDLI--RSKNFL------------------LLMDSALE----GHFS-----NDEGTELVRLASRCLQSEAR 230 (423)
Q Consensus 180 g~~~~~~~~~~~~--~~~~~~------------------~~~~~~~~----~~~~-----~~~~~~l~~li~~cl~~dp~ 230 (423)
|..+|........ ...... ..+..... ..++ ...+.++.++|.+||+.||.
T Consensus 364 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~ 443 (501)
T PHA03210 364 HDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWH 443 (501)
T ss_pred CCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcc
Confidence 8855432211000 000000 00000000 0000 12345688899999999999
Q ss_pred CCCCHHHHHHHHHh
Q 014484 231 ERPNAKSLVISLMS 244 (423)
Q Consensus 231 ~Rps~~~vl~~l~~ 244 (423)
+|||+.|++.|..-
T Consensus 444 ~Rpsa~elL~hp~f 457 (501)
T PHA03210 444 LRPGAAELLALPLF 457 (501)
T ss_pred cCcCHHHHhhChhh
Confidence 99999999988553
|
|
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-36 Score=283.00 Aligned_cols=241 Identities=16% Similarity=0.153 Sum_probs=186.2
Q ss_pred CCCCccceee--eecceeeeeecCCC---hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSIC--WFHCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~--~~~~~~~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
|++|.||.+. ..+..+++|++... ......+.+|+++++.++|+||+++++++...+..+++|||+++++|.+++
T Consensus 11 ~~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l 90 (314)
T cd08216 11 EDLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLL 90 (314)
T ss_pred cCCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHH
Confidence 4444444444 44677888876543 344568899999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-----------Cccc
Q 014484 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----------KSYS 145 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-----------~~~~ 145 (423)
.......+++..+..++.|++.||.|||+++ |+||||||+||+++.++.++++|||.+...... ....
T Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~-ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (314)
T cd08216 91 KTHFPEGLPELAIAFILKDVLNALDYIHSKG-FIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSV 169 (314)
T ss_pred HHhcccCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCcceEEEecCCceEEecCccceeecccccccccccccccccc
Confidence 7544556899999999999999999999999 999999999999999999999999987644321 2234
Q ss_pred cCcccCCcccccc--CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhh----c------------------
Q 014484 146 TNLAFTPPEYMRT--GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLL----M------------------ 201 (423)
Q Consensus 146 ~t~~y~aPE~~~~--~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~----~------------------ 201 (423)
++..|+|||.+.+ ..++.++|+||+||++|+|++|..||................ .
T Consensus 170 ~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (314)
T cd08216 170 KNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSS 249 (314)
T ss_pred ccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCccccc
Confidence 5678999999875 358899999999999999999999886432111100000000 0
Q ss_pred ------cccccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 202 ------DSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 202 ------~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
............+.++.+++.+||..||++|||+++++.|..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~ 297 (314)
T cd08216 250 NEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSF 297 (314)
T ss_pred ccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCch
Confidence 000011122345678999999999999999999999998855
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-36 Score=276.44 Aligned_cols=234 Identities=16% Similarity=0.238 Sum_probs=189.5
Q ss_pred CCCCccceeeee--cceeeeeecCCC--hhhHHHHHHHHHHHhcCC---CCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS--DLGETLNLEEAKAVGNLR---SERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~--~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||++.+. +..+++|++... ......+.+|+.+++.+. |||++++++++..+...++||||++|++|.+
T Consensus 12 g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e~~~~~~L~~ 91 (277)
T cd06917 12 GAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIMEYAEGGSVRT 91 (277)
T ss_pred cCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEecCCCCcHHH
Confidence 899999999974 667777776543 334567889999999996 9999999999999999999999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccc
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAF 150 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y 150 (423)
++.. +.+++..++.++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ....++..|
T Consensus 92 ~~~~---~~l~~~~~~~i~~~i~~~l~~lh~~~-i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y 167 (277)
T cd06917 92 LMKA---GPIAEKYISVIIREVLVALKYIHKVG-VIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRSTFVGTPYW 167 (277)
T ss_pred HHHc---cCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCcCHHHEEEcCCCCEEEccCCceeecCCCccccccccCCcce
Confidence 9853 37899999999999999999999999 999999999999999999999999998765543 234578899
Q ss_pred CCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCCh-hHHHHHHHHHHHhcccC
Q 014484 151 TPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSN-DEGTELVRLASRCLQSE 228 (423)
Q Consensus 151 ~aPE~~~~~-~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~li~~cl~~d 228 (423)
+|||.+.++ .++.++|+|||||++|+|++|..||....... ............++. ..+.++.+++.+||+.|
T Consensus 168 ~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~ 242 (277)
T cd06917 168 MAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFR-----AMMLIPKSKPPRLEDNGYSKLLREFVAACLDEE 242 (277)
T ss_pred eCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhh-----hhhccccCCCCCCCcccCCHHHHHHHHHHcCCC
Confidence 999988754 47899999999999999999998876532111 111111111112222 25678999999999999
Q ss_pred cCCCCCHHHHHHHHHh
Q 014484 229 ARERPNAKSLVISLMS 244 (423)
Q Consensus 229 p~~Rps~~~vl~~l~~ 244 (423)
|++||++.+++.+-.-
T Consensus 243 p~~R~~~~~il~~~~~ 258 (277)
T cd06917 243 PKERLSAEELLKSKWI 258 (277)
T ss_pred cccCcCHHHHhhChHh
Confidence 9999999999987443
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=284.56 Aligned_cols=242 Identities=19% Similarity=0.252 Sum_probs=196.6
Q ss_pred CCCCccceeeeec-ceeeeeecCCCh--hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICWFH-CHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~~~-~~~~~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
|-||.|-.+...+ ..+|+|.+.... +....|.+||++|.+|+||||++++|+|..++.+++|+||+++|+|.+|+.+
T Consensus 549 GqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmEnGDLnqFl~a 628 (807)
T KOG1094|consen 549 GQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYMENGDLNQFLSA 628 (807)
T ss_pred cccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHhcCcHHHHHHh
Confidence 6688887777655 788888886644 4467999999999999999999999999999999999999999999999986
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCCccc------cCcccCC
Q 014484 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYS------TNLAFTP 152 (423)
Q Consensus 79 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~------~t~~y~a 152 (423)
+....+.....++|+.||++|++||.+.+ +|||||.+.|+|++.++++||+|||.++.+-.+.... -+++|||
T Consensus 629 heapt~~t~~~vsi~tqiasgmaYLes~n-fVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwma 707 (807)
T KOG1094|consen 629 HELPTAETAPGVSICTQIASGMAYLESLN-FVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMA 707 (807)
T ss_pred ccCcccccchhHHHHHHHHHHHHHHHhhc-hhhccccccceeecCcccEEecCcccccccccCCceeeecceeeeeeehh
Confidence 54444566777899999999999999999 9999999999999999999999999999776654433 3589999
Q ss_pred ccccccCCCCCCcceehhHHHHHHHhh--CCCCCCchhhHHhhhchhhhhcccc---ccCCCChhHHHHHHHHHHHhccc
Q 014484 153 PEYMRTGRVTPESVVYSFGTMLLDLLS--GKHIPPSHALDLIRSKNFLLLMDSA---LEGHFSNDEGTELVRLASRCLQS 227 (423)
Q Consensus 153 PE~~~~~~~~~~~Di~slG~~l~el~~--g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~li~~cl~~ 227 (423)
+|.+.-++++.++|+|+||+++||+++ ...|+.....+.. .++.-...+.. ....-|.-++..+.+++.+||..
T Consensus 708 wEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~v-ven~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~ 786 (807)
T KOG1094|consen 708 WESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQV-VENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRR 786 (807)
T ss_pred HHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHH-HHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhch
Confidence 999999999999999999999999865 4456654322211 11222222221 11223455788899999999999
Q ss_pred CcCCCCCHHHHHHHHHhh
Q 014484 228 EARERPNAKSLVISLMSL 245 (423)
Q Consensus 228 dp~~Rps~~~vl~~l~~~ 245 (423)
|-.+|||++++..+|++.
T Consensus 787 es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 787 ESEQRPSFEQLHLFLQED 804 (807)
T ss_pred hhhcCCCHHHHHHHHHHh
Confidence 999999999999988764
|
|
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-36 Score=273.54 Aligned_cols=233 Identities=19% Similarity=0.292 Sum_probs=189.1
Q ss_pred CCCCccceeeee--cceeeeeecCCChh---hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDL---GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
|+||.||.+... +..+++|++..... ....+.+|+.+++.++|+||+++++++...+..++|+||+++++|.+++
T Consensus 11 G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~ 90 (264)
T cd06626 11 GTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYCSGGTLEELL 90 (264)
T ss_pred CCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecCCCCcHHHHH
Confidence 899999999874 56677777654433 4668889999999999999999999999999999999999999999998
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC--------ccccCc
Q 014484 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK--------SYSTNL 148 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--------~~~~t~ 148 (423)
.. +..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++....... ...++.
T Consensus 91 ~~--~~~~~~~~~~~i~~~i~~~l~~lh~~~-i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~ 167 (264)
T cd06626 91 EH--GRILDEHVIRVYTLQLLEGLAYLHSHG-IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTP 167 (264)
T ss_pred hh--cCCCChHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEcccccccccCCCCCcccccccCCcCCc
Confidence 54 446899999999999999999999999 9999999999999999999999999987654321 235678
Q ss_pred ccCCccccccCC---CCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChh--HHHHHHHHHHH
Q 014484 149 AFTPPEYMRTGR---VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND--EGTELVRLASR 223 (423)
Q Consensus 149 ~y~aPE~~~~~~---~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~li~~ 223 (423)
.|+|||.+.+.. .+.++||||||+++++|++|..||........ .............+.. +++.+.+++.+
T Consensus 168 ~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 243 (264)
T cd06626 168 AYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQ----IMFHVGAGHKPPIPDSLQLSPEGKDFLDR 243 (264)
T ss_pred CccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHH----HHHHHhcCCCCCCCcccccCHHHHHHHHH
Confidence 999999988766 88999999999999999999988854311110 0000111112222332 37789999999
Q ss_pred hcccCcCCCCCHHHHHHH
Q 014484 224 CLQSEARERPNAKSLVIS 241 (423)
Q Consensus 224 cl~~dp~~Rps~~~vl~~ 241 (423)
||+.+|.+|||+.+++.+
T Consensus 244 ~l~~~p~~R~~~~~i~~~ 261 (264)
T cd06626 244 CLESDPKKRPTASELLQH 261 (264)
T ss_pred HccCCcccCCCHHHHhcC
Confidence 999999999999999865
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-36 Score=280.31 Aligned_cols=238 Identities=16% Similarity=0.195 Sum_probs=185.9
Q ss_pred CCCCccceeeee--cceeeeeecCCChh---hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDL---GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
|++|.||++.+. +..++++.+..... ....+.+|++++++++||||+++++++.+++..++||||+. ++|..++
T Consensus 11 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~~ 89 (284)
T cd07860 11 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFM 89 (284)
T ss_pred CCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeeccc-cCHHHHH
Confidence 789999999874 56677776643322 23578899999999999999999999999999999999996 5899988
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccCC
Q 014484 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTP 152 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~a 152 (423)
....+..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ....++..|+|
T Consensus 90 ~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~-i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~a 168 (284)
T cd07860 90 DASPLSGIPLPLIKSYLFQLLQGLAFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 168 (284)
T ss_pred HhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEEeeccchhhcccCccccccccccccccC
Confidence 6555667999999999999999999999999 999999999999999999999999998755432 22345788999
Q ss_pred ccccccCC-CCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhh--------------------cccccc---CC
Q 014484 153 PEYMRTGR-VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLL--------------------MDSALE---GH 208 (423)
Q Consensus 153 PE~~~~~~-~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~---~~ 208 (423)
||.+.+.. ++.++|||||||++|+|+||..||................ ...... ..
T Consensus 169 PE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (284)
T cd07860 169 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSK 248 (284)
T ss_pred CeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHH
Confidence 99887654 6889999999999999999998886542211100000000 000000 00
Q ss_pred CChhHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014484 209 FSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (423)
Q Consensus 209 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~ 241 (423)
....+++++.++|.+||+.||++|||+++++.|
T Consensus 249 ~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 281 (284)
T cd07860 249 VVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH 281 (284)
T ss_pred HcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence 112346778999999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-36 Score=273.92 Aligned_cols=235 Identities=17% Similarity=0.252 Sum_probs=194.6
Q ss_pred CCCCccceeeee--cceeeeeecCCCh--hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~ 77 (423)
|++|.||++... +..++++.+.... .....+.+|+..+..++|+||+++++++..++..++||||+++++|.+++.
T Consensus 12 g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~ 91 (264)
T cd06623 12 GSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMDGGSLADLLK 91 (264)
T ss_pred cCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEecCCCcHHHHHH
Confidence 889999999885 6667777765544 346788999999999999999999999999999999999999999999996
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHc-CCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC----ccccCcccCC
Q 014484 78 HWETQPMKWAMRLRVALYLAQALEYCSS-KGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK----SYSTNLAFTP 152 (423)
Q Consensus 78 ~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~----~~~~t~~y~a 152 (423)
. ...+++..++.++.|++.|+.|||+ .+ ++||||+|+||+++.++.++|+|||++....... ...++..|+|
T Consensus 92 ~--~~~l~~~~~~~~~~~l~~~l~~lh~~~~-~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~ 168 (264)
T cd06623 92 K--VGKIPEPVLAYIARQILKGLDYLHTKRH-IIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNTFVGTVTYMS 168 (264)
T ss_pred H--cCCCCHHHHHHHHHHHHHHHHHHhccCC-CccCCCCHHHEEECCCCCEEEccCccceecccCCCcccceeecccccC
Confidence 4 3679999999999999999999999 99 9999999999999999999999999987665432 3457889999
Q ss_pred ccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChh-HHHHHHHHHHHhcccCcCC
Q 014484 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND-EGTELVRLASRCLQSEARE 231 (423)
Q Consensus 153 PE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~~cl~~dp~~ 231 (423)
||.+.+..++.++|+||||+++|+|++|..|+...... ........+........+.. ++..+.++|.+||..+|++
T Consensus 169 pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~ 246 (264)
T cd06623 169 PERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQP--SFFELMQAICDGPPPSLPAEEFSPEFRDFISACLQKDPKK 246 (264)
T ss_pred HhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccccc--CHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHccCChhh
Confidence 99999888999999999999999999999887654210 00111111112222233444 6788999999999999999
Q ss_pred CCCHHHHHHH
Q 014484 232 RPNAKSLVIS 241 (423)
Q Consensus 232 Rps~~~vl~~ 241 (423)
|||+.+++.+
T Consensus 247 R~~~~~ll~~ 256 (264)
T cd06623 247 RPSAAELLQH 256 (264)
T ss_pred CCCHHHHHhC
Confidence 9999999987
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=279.55 Aligned_cols=233 Identities=18% Similarity=0.203 Sum_probs=187.6
Q ss_pred CCCCccceeee--ecceeeeeecCCCh----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~--~~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.+ .+..++++.+.... .....+.+|+++++.++|||++++++++.++...++||||+.+ +|.++
T Consensus 32 g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~ 110 (313)
T cd06633 32 GSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYCLG-SASDL 110 (313)
T ss_pred CCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEecCCC-CHHHH
Confidence 88999999986 36667777764322 2345678899999999999999999999999999999999965 77777
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCCccccCcccCCccc
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEY 155 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~t~~y~aPE~ 155 (423)
+.. ....+++.++..++.|++.+|.|||++| ++|+||+|+||+++.++.++|+|||++..........++..|+|||.
T Consensus 111 l~~-~~~~l~~~~~~~~~~qi~~al~~LH~~g-i~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~~~~~~~~y~aPE~ 188 (313)
T cd06633 111 LEV-HKKPLQEVEIAAITHGALQGLAYLHSHN-MIHRDIKAGNILLTEPGQVKLADFGSASKSSPANSFVGTPYWMAPEV 188 (313)
T ss_pred HHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCChhhEEECCCCCEEEeecCCCcccCCCCCccccccccChhh
Confidence 743 3456899999999999999999999999 99999999999999999999999999877666666778999999998
Q ss_pred cc---cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCC
Q 014484 156 MR---TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (423)
Q Consensus 156 ~~---~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (423)
+. ...++.++|||||||++|+|++|..|+......... ................+..+.+++.+||+.+|.+|
T Consensus 189 ~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~R 264 (313)
T cd06633 189 ILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL----YHIAQNDSPTLQSNEWTDSFRGFVDYCLQKIPQER 264 (313)
T ss_pred ccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHH----HHHHhcCCCCCCccccCHHHHHHHHHHccCChhhC
Confidence 74 356888999999999999999999887653211111 11111111111223345679999999999999999
Q ss_pred CCHHHHHHH
Q 014484 233 PNAKSLVIS 241 (423)
Q Consensus 233 ps~~~vl~~ 241 (423)
|++.+++.+
T Consensus 265 p~~~~~l~~ 273 (313)
T cd06633 265 PASAELLRH 273 (313)
T ss_pred cCHHHHhcC
Confidence 999999977
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-36 Score=271.02 Aligned_cols=233 Identities=20% Similarity=0.261 Sum_probs=193.3
Q ss_pred CCCCccceeeee--cceeeeeecCCChh-hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDL-GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
|++|.||.+.+. +..++++++..... ....+.+|+++++.++|+||+++++++..+...++++||++|++|.+++..
T Consensus 11 g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 90 (253)
T cd05122 11 GGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKS 90 (253)
T ss_pred CCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCCCcHHHHHhh
Confidence 789999999985 66677777766543 567889999999999999999999999999999999999999999999864
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC---CccccCcccCCccc
Q 014484 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTPPEY 155 (423)
Q Consensus 79 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~~t~~y~aPE~ 155 (423)
. ...+++..+..++.|++.+|.+||+++ ++||||+|+||+++.++.++|+|||.+...... ....++..|+|||.
T Consensus 91 ~-~~~~~~~~~~~i~~~i~~~l~~lh~~~-i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~PE~ 168 (253)
T cd05122 91 T-NQTLTESQIAYVCKELLKGLEYLHSNG-IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMVGTPYWMAPEV 168 (253)
T ss_pred c-CCCCCHHHHHHHHHHHHHHHHHhhcCC-EecCCCCHHHEEEccCCeEEEeeccccccccccccccceecCCcccCHHH
Confidence 2 257999999999999999999999999 999999999999999999999999998776654 34567889999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCCh--hHHHHHHHHHHHhcccCcCCCC
Q 014484 156 MRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSN--DEGTELVRLASRCLQSEARERP 233 (423)
Q Consensus 156 ~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~li~~cl~~dp~~Rp 233 (423)
+.+..++.++|+||||+++++|++|..|+......... ..... ......+. .++..+.++|.+||+.||++||
T Consensus 169 ~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~ 243 (253)
T cd05122 169 INGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKAL----FKIAT-NGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRP 243 (253)
T ss_pred HcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHH----HHHHh-cCCCCcCcccccCHHHHHHHHHHccCChhhCC
Confidence 98888999999999999999999999887654111110 00110 11111222 2367899999999999999999
Q ss_pred CHHHHHHH
Q 014484 234 NAKSLVIS 241 (423)
Q Consensus 234 s~~~vl~~ 241 (423)
|+.+++.|
T Consensus 244 t~~~~l~~ 251 (253)
T cd05122 244 TAEQLLKH 251 (253)
T ss_pred CHHHHhcC
Confidence 99999876
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-36 Score=276.90 Aligned_cols=238 Identities=16% Similarity=0.236 Sum_probs=184.6
Q ss_pred CCCCccceeeee--cceeeeeecCCCh--hhHHHHHHHHHH-HhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD--LGETLNLEEAKA-VGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~--~~~~~~~~E~~~-l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
|+||.||++.+. +..+++|.+.... .....+..|+.. ++.++||||+++++++..++..++||||++| +|.+++
T Consensus 12 g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l 90 (283)
T cd06617 12 GAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEVMDT-SLDKFY 90 (283)
T ss_pred cCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhhhcc-cHHHHH
Confidence 899999999985 6778888775442 234456667765 5566899999999999999999999999974 888777
Q ss_pred ccC--CCCCCCHHHHHHHHHHHHHHHHHHHcC-CCeeeccCCCCCeeecCCCCeEEccccccccCCCC---CccccCccc
Q 014484 77 FHW--ETQPMKWAMRLRVALYLAQALEYCSSK-GRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAF 150 (423)
Q Consensus 77 ~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~-~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~~t~~y 150 (423)
... .+..+++..++.++.|++.||.|||++ + ++||||||+||+++.++.+||+|||++...... ....++..|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~-i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y 169 (283)
T cd06617 91 KKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLS-VIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVAKTIDAGCKPY 169 (283)
T ss_pred HHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCC-eecCCCCHHHEEECCCCCEEEeecccccccccccccccccCCccc
Confidence 532 235689999999999999999999997 8 999999999999999999999999998765432 224578899
Q ss_pred CCcccccc----CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcc
Q 014484 151 TPPEYMRT----GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (423)
Q Consensus 151 ~aPE~~~~----~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (423)
+|||.+.+ ..++.++|+|||||++|+|++|..|+...... ...................++.++.++|.+||.
T Consensus 170 ~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~ 246 (283)
T cd06617 170 MAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTP---FQQLKQVVEEPSPQLPAEKFSPEFQDFVNKCLK 246 (283)
T ss_pred cChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccC---HHHHHHHHhcCCCCCCccccCHHHHHHHHHHcc
Confidence 99998864 34688999999999999999999887532111 011111111111111122457889999999999
Q ss_pred cCcCCCCCHHHHHHHHHh
Q 014484 227 SEARERPNAKSLVISLMS 244 (423)
Q Consensus 227 ~dp~~Rps~~~vl~~l~~ 244 (423)
.+|++||++.+++.+-.-
T Consensus 247 ~~p~~Rp~~~~il~~~~~ 264 (283)
T cd06617 247 KNYKERPNYPELLQHPFF 264 (283)
T ss_pred CChhhCcCHHHHhcCchh
Confidence 999999999999987443
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-36 Score=277.94 Aligned_cols=237 Identities=15% Similarity=0.204 Sum_probs=182.4
Q ss_pred CCCCccceeeee--cceeeeeecCCChh--hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDL--GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~ 77 (423)
|++|.||.+... +..+++|.+..... ....+.+|++++++++|+||+++++++..++..++||||+.+ +|.+++.
T Consensus 16 g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~ 94 (291)
T cd07844 16 GSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEYLDT-DLKQYMD 94 (291)
T ss_pred cCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEecCCC-CHHHHHH
Confidence 889999999874 56778877654332 234567899999999999999999999999999999999986 9999886
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccCCc
Q 014484 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPP 153 (423)
Q Consensus 78 ~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~aP 153 (423)
+. ...+++..+..++.|++.||.|||+++ ++||||||+||+++.++.++|+|||+++..... ....++..|+||
T Consensus 95 ~~-~~~~~~~~~~~~~~ql~~al~~lH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aP 172 (291)
T cd07844 95 DC-GGGLSMHNVRLFLFQLLRGLAYCHQRR-VLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTYSNEVVTLWYRPP 172 (291)
T ss_pred hC-CCCCCHHHHHHHHHHHHHHHHHHHhCC-eecccCCHHHEEEcCCCCEEECccccccccCCCCccccccccccccCCc
Confidence 43 347899999999999999999999999 999999999999999999999999998754321 223457889999
Q ss_pred ccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccc------------------c---cc-C---
Q 014484 154 EYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS------------------A---LE-G--- 207 (423)
Q Consensus 154 E~~~~-~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~------------------~---~~-~--- 207 (423)
|.+.+ ..++.++||||+|+++|+|++|..||................... . .. .
T Consensus 173 E~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (291)
T cd07844 173 DVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLI 252 (291)
T ss_pred HHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHH
Confidence 98875 458899999999999999999998885432100000000000000 0 00 0
Q ss_pred CCChhHH--HHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014484 208 HFSNDEG--TELVRLASRCLQSEARERPNAKSLVIS 241 (423)
Q Consensus 208 ~~~~~~~--~~l~~li~~cl~~dp~~Rps~~~vl~~ 241 (423)
......+ .++.+++.+||+.+|.+|||+.+++.+
T Consensus 253 ~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~ 288 (291)
T cd07844 253 NHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKH 288 (291)
T ss_pred HhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcC
Confidence 0001122 678899999999999999999999865
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-36 Score=281.43 Aligned_cols=233 Identities=18% Similarity=0.179 Sum_probs=183.5
Q ss_pred CCCCccceeeeecc-eeee---eecCCChhhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWFHC-HLKS---SVLESSDLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~~~-~~~~---~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
||.+.||++..-+. .++. +.+..+......|.+|+..|.+| .|.+||++++|-..++.+||||||=+. +|..+|
T Consensus 372 GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE~Gd~-DL~kiL 450 (677)
T KOG0596|consen 372 GGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVMECGDI-DLNKIL 450 (677)
T ss_pred CCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEeecccc-cHHHHH
Confidence 88889999877422 2222 22344556678899999999999 689999999999999999999999865 999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC------CccccCccc
Q 014484 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------KSYSTNLAF 150 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~------~~~~~t~~y 150 (423)
+.. ...++.-.+..+..|++.++.++|.+| |||.||||.|+|+- .|.+||+|||+|..+... .++.||+.|
T Consensus 451 ~k~-~~~~~~~~lk~ywkqML~aV~~IH~~g-IVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NY 527 (677)
T KOG0596|consen 451 KKK-KSIDPDWFLKFYWKQMLLAVKTIHQHG-IVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTTSIVKDSQVGTVNY 527 (677)
T ss_pred Hhc-cCCCchHHHHHHHHHHHHHHHHHHHhc-eeecCCCcccEEEE-eeeEEeeeechhcccCccccceeeccccCcccc
Confidence 653 333443478889999999999999999 99999999999997 578999999999877643 457899999
Q ss_pred CCccccccC-----------CCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhH-HHHHH
Q 014484 151 TPPEYMRTG-----------RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDE-GTELV 218 (423)
Q Consensus 151 ~aPE~~~~~-----------~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~ 218 (423)
|+||.+... +.++++||||||||||+|+.|++||..-. .....+..+.++...-++|.-- ..++.
T Consensus 528 MsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~---n~~aKl~aI~~P~~~Iefp~~~~~~~li 604 (677)
T KOG0596|consen 528 MSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII---NQIAKLHAITDPNHEIEFPDIPENDELI 604 (677)
T ss_pred cCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH---HHHHHHHhhcCCCccccccCCCCchHHH
Confidence 999987532 37789999999999999999998876531 1223344455553333343321 22399
Q ss_pred HHHHHhcccCcCCCCCHHHHHHH
Q 014484 219 RLASRCLQSEARERPNAKSLVIS 241 (423)
Q Consensus 219 ~li~~cl~~dp~~Rps~~~vl~~ 241 (423)
++++.||.+||.+|||+.++|+|
T Consensus 605 ~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 605 DVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred HHHHHHHhcCcccCCCcHHHhcC
Confidence 99999999999999999999977
|
|
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=278.17 Aligned_cols=237 Identities=17% Similarity=0.186 Sum_probs=189.3
Q ss_pred CCCCccceeeee--cceeeeeecCC----ChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLES----SDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.+. +..++++.+.. .......+.+|+++++.++|+|++++.+++......++||||+.| +|.+.
T Consensus 26 g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~ 104 (308)
T cd06634 26 GSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLG-SASDL 104 (308)
T ss_pred CCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEccCC-CHHHH
Confidence 889999999874 45566665532 223345678999999999999999999999999999999999975 88777
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCCccccCcccCCccc
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEY 155 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~t~~y~aPE~ 155 (423)
+.. ....+++..+..++.|++.|+.|||+++ ++||||+|+||+++.++.++|+|||++..........++..|+|||.
T Consensus 105 ~~~-~~~~l~~~~~~~~~~~l~~~l~~LH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~y~aPE~ 182 (308)
T cd06634 105 LEV-HKKPLQEVEIAAVTHGALQGLAYLHSHN-MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEV 182 (308)
T ss_pred HHH-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHhEEECCCCcEEECCcccceeecCcccccCCccccCHHH
Confidence 643 3456899999999999999999999999 99999999999999999999999999987776666778999999998
Q ss_pred cc---cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCC
Q 014484 156 MR---TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (423)
Q Consensus 156 ~~---~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (423)
+. ...++.++|||||||++|+|++|..|+........ .............+..++..+.++|.+||+.+|.+|
T Consensus 183 ~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~R 258 (308)
T cd06634 183 ILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA----LYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDR 258 (308)
T ss_pred HhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHH----HHHHhhcCCCCcCcccccHHHHHHHHHHhhCCcccC
Confidence 74 34578899999999999999999988754311111 111111111111233467789999999999999999
Q ss_pred CCHHHHHHHHHhh
Q 014484 233 PNAKSLVISLMSL 245 (423)
Q Consensus 233 ps~~~vl~~l~~~ 245 (423)
|++++++.+....
T Consensus 259 p~~~~ll~~~~~~ 271 (308)
T cd06634 259 PTSEVLLKHRFVL 271 (308)
T ss_pred CCHHHHhhCcccc
Confidence 9999999885443
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-36 Score=277.53 Aligned_cols=234 Identities=18% Similarity=0.213 Sum_probs=189.0
Q ss_pred CCCCccceeeee--cceeeeeecCCCh-hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
|+||.||.+... +..+++|.+.... .....+.+|+.+++.++|+||+++++++..++..++||||+++++|.+++.
T Consensus 31 g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~- 109 (292)
T cd06657 31 GSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVT- 109 (292)
T ss_pred CCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHHHHHh-
Confidence 889999999874 5667777654333 345678899999999999999999999999999999999999999999874
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccCCcc
Q 014484 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPPE 154 (423)
Q Consensus 79 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~aPE 154 (423)
.+.+++..+..++.|++.||.|||+++ ++||||+|+||+++.++.++|+|||++...... ....++..|++||
T Consensus 110 --~~~~~~~~~~~~~~ql~~~l~~lH~~g-ivH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~pE 186 (292)
T cd06657 110 --HTRMNEEQIAAVCLAVLKALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPE 186 (292)
T ss_pred --cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEEcccccceecccccccccccccCccccCHH
Confidence 346899999999999999999999999 999999999999999999999999987655432 2345788999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCC
Q 014484 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (423)
Q Consensus 155 ~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (423)
.+.+..++.++|+||+|+++|+|++|..|+......... ............ ....++.++.+++.+||+.||.+||+
T Consensus 187 ~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~~P~~R~~ 263 (292)
T cd06657 187 LISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM-KMIRDNLPPKLK--NLHKVSPSLKGFLDRLLVRDPAQRAT 263 (292)
T ss_pred HhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHhhCCcccC--CcccCCHHHHHHHHHHHhCCcccCcC
Confidence 998888999999999999999999999887653211110 011111111111 12235678999999999999999999
Q ss_pred HHHHHHHH
Q 014484 235 AKSLVISL 242 (423)
Q Consensus 235 ~~~vl~~l 242 (423)
+.+++.|-
T Consensus 264 ~~~ll~~~ 271 (292)
T cd06657 264 AAELLKHP 271 (292)
T ss_pred HHHHhcCh
Confidence 99999873
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=271.12 Aligned_cols=234 Identities=18% Similarity=0.221 Sum_probs=196.1
Q ss_pred CCCCccceeeee--cceeeeeecCCCh---hhHHHHHHHHHHHhcCCCCCccceEeEEEeC--CceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEA--DERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e~~~~~~L~~ 74 (423)
|++|.||.+... +..++++++.... ...+.+.+|+.++++++||||+++++.+... ...++||||+++++|.+
T Consensus 11 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~ 90 (260)
T cd06606 11 GSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSS 90 (260)
T ss_pred cCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEEecCCCcHHH
Confidence 899999999986 6777777775554 4567889999999999999999999999988 78999999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC------ccccCc
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK------SYSTNL 148 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~------~~~~t~ 148 (423)
++.. ...+++..++.++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||.+....... ...++.
T Consensus 91 ~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~-~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~ 167 (260)
T cd06606 91 LLKK--FGKLPEPVIRKYTRQILEGLAYLHSNG-IVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTP 167 (260)
T ss_pred HHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEcCCCCEEEcccccEEecccccccccccCCCCCc
Confidence 9864 337999999999999999999999999 9999999999999999999999999987665443 345788
Q ss_pred ccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccC
Q 014484 149 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSE 228 (423)
Q Consensus 149 ~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 228 (423)
.|+|||.+.+...+.++||||||+++++|++|..||..... .................+...+..+.+++.+||+.|
T Consensus 168 ~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~ 244 (260)
T cd06606 168 YWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGN---PMAALYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRD 244 (260)
T ss_pred cccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc---hHHHHHhccccCCCcCCCcccCHHHHHHHHHhCcCC
Confidence 99999999888899999999999999999999988765420 011111111122333455566889999999999999
Q ss_pred cCCCCCHHHHHHH
Q 014484 229 ARERPNAKSLVIS 241 (423)
Q Consensus 229 p~~Rps~~~vl~~ 241 (423)
|++||++.+++.|
T Consensus 245 p~~Rp~~~~ll~~ 257 (260)
T cd06606 245 PKKRPTADELLQH 257 (260)
T ss_pred hhhCCCHHHHhhC
Confidence 9999999999976
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-36 Score=279.15 Aligned_cols=237 Identities=18% Similarity=0.153 Sum_probs=185.1
Q ss_pred CCCCccceeeee--cceeeeeecCCChhh------HHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHH
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLG------ETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLA 73 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~------~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 73 (423)
|++|.||++.+. +..+++|.+...... ...+..|+++++.++|+||+++++++.+.+..++||||+ +++|.
T Consensus 11 g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L~ 89 (298)
T cd07841 11 GTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVFEFM-ETDLE 89 (298)
T ss_pred ccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEEccc-CCCHH
Confidence 899999999975 567888777554322 345678999999999999999999999999999999999 88999
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC----ccccCcc
Q 014484 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK----SYSTNLA 149 (423)
Q Consensus 74 ~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~----~~~~t~~ 149 (423)
+++.+. ...+++..+..++.||+.||.|||+++ ++|+||+|+||+++.++.++|+|||+++...... ...+++.
T Consensus 90 ~~i~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~-i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~ 167 (298)
T cd07841 90 KVIKDK-SIVLTPADIKSYMLMTLRGLEYLHSNW-ILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKMTHQVVTRW 167 (298)
T ss_pred HHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecCCChhhEEEcCCCCEEEccceeeeeccCCCcccccccccee
Confidence 999642 236999999999999999999999999 9999999999999999999999999988665432 2345778
Q ss_pred cCCcccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhh-----------------hccccccC----
Q 014484 150 FTPPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLL-----------------LMDSALEG---- 207 (423)
Q Consensus 150 y~aPE~~~~-~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~---- 207 (423)
|+|||.+.+ ..++.++|+|||||++++|++|.++|............... ........
T Consensus 168 y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (298)
T cd07841 168 YRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPL 247 (298)
T ss_pred eeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccccccCCcch
Confidence 999998865 45789999999999999999997666543211000000000 00000000
Q ss_pred -CCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014484 208 -HFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (423)
Q Consensus 208 -~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~ 241 (423)
......+.++.++|.+||+.||++|||+.+++.+
T Consensus 248 ~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 248 KQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred hhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 0112346789999999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-36 Score=277.54 Aligned_cols=234 Identities=17% Similarity=0.245 Sum_probs=189.9
Q ss_pred CCCCccceeeee--cceeeeeecCCCh-hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
|+||.||++... +..+++|.+.... ...+.+.+|+.+++.++||||+++++++..++..++|+||+++++|.+++.+
T Consensus 30 g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~ 109 (293)
T cd06647 30 GASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE 109 (293)
T ss_pred CCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecCCCCcHHHHHhh
Confidence 789999999863 5667777765432 3356788999999999999999999999999999999999999999999853
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC----ccccCcccCCcc
Q 014484 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK----SYSTNLAFTPPE 154 (423)
Q Consensus 79 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~----~~~~t~~y~aPE 154 (423)
..+++..+..++.|++.||.|||+++ ++|+||+|+||+++.++.++|+|||++....... ...+++.|++||
T Consensus 110 ---~~l~~~~~~~i~~~l~~al~~LH~~g-i~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~~PE 185 (293)
T cd06647 110 ---TCMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPE 185 (293)
T ss_pred ---cCCCHHHHHHHHHHHHHHHHHHHhCC-EeeccCCHHHEEEcCCCCEEEccCcceecccccccccccccCChhhcCch
Confidence 45889999999999999999999999 9999999999999999999999999876544332 245778899999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhh-ccccccCCCChhHHHHHHHHHHHhcccCcCCCC
Q 014484 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLL-MDSALEGHFSNDEGTELVRLASRCLQSEARERP 233 (423)
Q Consensus 155 ~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 233 (423)
.+.+..++.++|+|||||++|++++|..||....... ..... .........+...+..+.+++.+||..+|++||
T Consensus 186 ~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp 261 (293)
T cd06647 186 VVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR----ALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRG 261 (293)
T ss_pred hhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhh----heeehhcCCCCCCCCccccCHHHHHHHHHHccCChhhCc
Confidence 9988889999999999999999999998886532111 01101 011111112334567899999999999999999
Q ss_pred CHHHHHHHHH
Q 014484 234 NAKSLVISLM 243 (423)
Q Consensus 234 s~~~vl~~l~ 243 (423)
++.+++.|-.
T Consensus 262 ~~~~il~h~~ 271 (293)
T cd06647 262 SAKELLQHPF 271 (293)
T ss_pred CHHHHhcCHH
Confidence 9999998853
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-36 Score=286.33 Aligned_cols=235 Identities=18% Similarity=0.238 Sum_probs=201.5
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhH---HHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGE---TLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
|.|+.|..+... +..|++|.+++...+. ..+.+|+++|..|+|||||+++.+.+....+|+||||+.+|.+++++
T Consensus 67 g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~eya~~ge~~~yl 146 (596)
T KOG0586|consen 67 GNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVMEYASGGELFDYL 146 (596)
T ss_pred ceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEEEeccCchhHHHH
Confidence 778888888874 7889999887766542 34789999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC---CccccCcccCCc
Q 014484 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTPP 153 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~~t~~y~aP 153 (423)
.+ .+++.+..+..++.|+++|++|||+++ |+|||||.+||||+.+.++||+|||++..+..+ .+.+|++.|.||
T Consensus 147 ~~--~gr~~e~~ar~~F~q~vsaveYcH~k~-ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~~lqt~cgsppyAaP 223 (596)
T KOG0586|consen 147 VK--HGRMKEKEARAKFRQIVSAVEYCHSKN-IVHRDLKAENILLDENMNIKIADFGFSTFFDYGLMLQTFCGSPPYAAP 223 (596)
T ss_pred Hh--cccchhhhhhhhhHHHHHHHHHHhhcc-eeccccchhhcccccccceeeeccccceeecccccccccCCCCCccCh
Confidence 64 567888999999999999999999999 999999999999999999999999999877654 567899999999
Q ss_pred cccccCCC-CCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccC--CCChhHHHHHHHHHHHhcccCcC
Q 014484 154 EYMRTGRV-TPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEG--HFSNDEGTELVRLASRCLQSEAR 230 (423)
Q Consensus 154 E~~~~~~~-~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dp~ 230 (423)
|.+.+.+| ++.+|+||+|+++|-|+.|..||.++..... -+..+.+ .++-.++.++.++|+++|..+|.
T Consensus 224 El~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~L--------r~rvl~gk~rIp~~ms~dce~lLrk~lvl~Ps 295 (596)
T KOG0586|consen 224 ELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKEL--------RPRVLRGKYRIPFYMSCDCEDLLRKFLVLNPS 295 (596)
T ss_pred HhhcCcccCCcceehhhhhhhheeeeecccccCCcccccc--------cchheeeeecccceeechhHHHHHHhhccCcc
Confidence 99998885 7799999999999999999999987532222 2222222 24455678899999999999999
Q ss_pred CCCCHHHHHHHHHhhhh
Q 014484 231 ERPNAKSLVISLMSLQK 247 (423)
Q Consensus 231 ~Rps~~~vl~~l~~~~~ 247 (423)
+|++.+++.++-+.-..
T Consensus 296 kr~~~dqim~~~W~n~~ 312 (596)
T KOG0586|consen 296 KRGPCDQIMKDRWRNDL 312 (596)
T ss_pred ccCCHHHhhhhcccchh
Confidence 99999999998765443
|
|
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=270.25 Aligned_cols=234 Identities=20% Similarity=0.219 Sum_probs=195.5
Q ss_pred CCCCccceeeee--cceeeeeecCCCh---hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
|+||.||++.+. +..+++|++.... .....+.+|+++++.++|||++++.+.+..++..++||||+++++|.+++
T Consensus 11 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l 90 (258)
T cd08215 11 GSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYADGGDLSQKI 90 (258)
T ss_pred CCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEecCCCcHHHHH
Confidence 899999999986 6777777775543 34567889999999999999999999999999999999999999999998
Q ss_pred ccCC--CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC----ccccCccc
Q 014484 77 FHWE--TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK----SYSTNLAF 150 (423)
Q Consensus 77 ~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~----~~~~t~~y 150 (423)
.... +..+++..+..++.+++.||.+||+++ ++|+||+|+||+++.++.++|+|||++....... ...+++.|
T Consensus 91 ~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~-~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y 169 (258)
T cd08215 91 KKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK-ILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLAKTVVGTPYY 169 (258)
T ss_pred HHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC-EecccCChHHeEEcCCCcEEECCccceeecccCcceecceeeeecc
Confidence 6532 467999999999999999999999999 9999999999999999999999999987655432 34578889
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcC
Q 014484 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (423)
Q Consensus 151 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (423)
+|||.+.+..++.++|+||+|+++++|++|..|+........ ............+...+.++.+++.+||..+|+
T Consensus 170 ~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~ 244 (258)
T cd08215 170 LSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLEL-----ALKILKGQYPPIPSQYSSELRNLVSSLLQKDPE 244 (258)
T ss_pred cChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHH-----HHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChh
Confidence 999999888899999999999999999999988765421111 111111223334556678899999999999999
Q ss_pred CCCCHHHHHHH
Q 014484 231 ERPNAKSLVIS 241 (423)
Q Consensus 231 ~Rps~~~vl~~ 241 (423)
+|||+.+++.+
T Consensus 245 ~Rp~~~~ll~~ 255 (258)
T cd08215 245 ERPSIAQILQS 255 (258)
T ss_pred hCcCHHHHhcC
Confidence 99999999876
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-36 Score=274.00 Aligned_cols=232 Identities=21% Similarity=0.242 Sum_probs=189.4
Q ss_pred CCCCCccceeeee--cceeeeeecCCChh----hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 1 MGGRCSKFSICWF--HCHLKSSVLESSDL----GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 1 ~G~~g~v~~~~~~--~~~~~~~~~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
-|+||.||.+.+. +..+++|++..... ....+.+|++++..++||||+++++.+..+...|+||||+++++|.+
T Consensus 3 ~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 82 (265)
T cd05579 3 KGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDLAS 82 (265)
T ss_pred CCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcHHH
Confidence 3899999999985 67788888765432 45678899999999999999999999999999999999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC------------C
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------------K 142 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~------------~ 142 (423)
++.+ .+.+++..+..++.|++.||.|||+++ ++||||+|+||+++.++.++|+|||++...... .
T Consensus 83 ~l~~--~~~~~~~~~~~i~~qi~~~L~~lH~~~-i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~ 159 (265)
T cd05579 83 LLEN--VGSLDEDVARIYIAEIVLALEYLHSNG-IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDK 159 (265)
T ss_pred HHHH--cCCCCHHHHHHHHHHHHHHHHHHHHcC-eecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccccccc
Confidence 9864 337899999999999999999999999 999999999999999999999999988754332 1
Q ss_pred ccccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChh--HHHHHHHH
Q 014484 143 SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND--EGTELVRL 220 (423)
Q Consensus 143 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~l 220 (423)
...++..|++||.......+.++|+||||+++++|++|..||........ ........ ..++.. .+..+.++
T Consensus 160 ~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~----~~~~~~~~--~~~~~~~~~~~~~~~~ 233 (265)
T cd05579 160 RIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEI----FQNILNGK--IEWPEDVEVSDEAIDL 233 (265)
T ss_pred CcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHhcCC--cCCCccccCCHHHHHH
Confidence 23467889999999888899999999999999999999988765422211 11111111 112222 37889999
Q ss_pred HHHhcccCcCCCCCH---HHHHHH
Q 014484 221 ASRCLQSEARERPNA---KSLVIS 241 (423)
Q Consensus 221 i~~cl~~dp~~Rps~---~~vl~~ 241 (423)
+.+||+.+|.+|||+ .+++.+
T Consensus 234 i~~~l~~~p~~Rpt~~~~~~~l~~ 257 (265)
T cd05579 234 ISKLLVPDPEKRLGAKSIEEIKNH 257 (265)
T ss_pred HHHHhcCCHhhcCCCccHHHHhcC
Confidence 999999999999999 666544
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-35 Score=270.39 Aligned_cols=232 Identities=17% Similarity=0.210 Sum_probs=188.8
Q ss_pred CCCCccceeeee--cceeeeeecCCC------hhhHHHHHHHHHHHhcCCCCCccceEeEEEeC--CceeEEEecCCCCC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS------DLGETLNLEEAKAVGNLRSERLANLIGCCYEA--DERLLVAEFMPNET 71 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e~~~~~~ 71 (423)
|+||.||.+.+. +..+++|.+... ......+.+|++++++++|+||+++++++.+. ...+++|||+++++
T Consensus 13 g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~ 92 (264)
T cd06653 13 GAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSIFVEYMPGGS 92 (264)
T ss_pred CCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEEEEEEeCCCCc
Confidence 889999999874 566777765321 23345788999999999999999999998765 35789999999999
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-------Ccc
Q 014484 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-------KSY 144 (423)
Q Consensus 72 L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-------~~~ 144 (423)
|.+++.. ...+++..+..++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||+++..... ...
T Consensus 93 L~~~~~~--~~~l~~~~~~~~~~~i~~al~~LH~~~-i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 169 (264)
T cd06653 93 IKDQLKA--YGALTENVTRRYTRQILQGVSYLHSNM-IVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSV 169 (264)
T ss_pred HHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEcCCCCEEECccccccccccccccCcccccc
Confidence 9999853 345899999999999999999999999 999999999999999999999999998765321 224
Q ss_pred ccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHh
Q 014484 145 STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRC 224 (423)
Q Consensus 145 ~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 224 (423)
.++..|+|||.+.+...+.++|+|||||++++|++|..||.... ................++...++.+.+++.+|
T Consensus 170 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~----~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~ 245 (264)
T cd06653 170 TGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYE----AMAAIFKIATQPTKPMLPDGVSDACRDFLKQI 245 (264)
T ss_pred CCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccC----HHHHHHHHHcCCCCCCCCcccCHHHHHHHHHH
Confidence 57889999999998889999999999999999999998876431 11222233333333445667788999999999
Q ss_pred cccCcCCCCCHHHHHHH
Q 014484 225 LQSEARERPNAKSLVIS 241 (423)
Q Consensus 225 l~~dp~~Rps~~~vl~~ 241 (423)
|+ +|..||++.+++.|
T Consensus 246 l~-~~~~r~~~~~~~~~ 261 (264)
T cd06653 246 FV-EEKRRPTAEFLLRH 261 (264)
T ss_pred hc-CcccCccHHHHhcC
Confidence 99 57999999999876
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=271.02 Aligned_cols=234 Identities=14% Similarity=0.187 Sum_probs=193.1
Q ss_pred CCCCccceeeee--cceeeeeecCCC---hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
|+||.||++.+. +..++++.+... ......+.+|+++++.++|+||+++.+++..+...++||||+++++|.+++
T Consensus 11 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~ 90 (256)
T cd08530 11 GSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYAPFGDLSKAI 90 (256)
T ss_pred CCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhcCCCCHHHHH
Confidence 889999998874 556677766442 234557789999999999999999999999999999999999999999988
Q ss_pred ccC--CCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC--CccccCcccCC
Q 014484 77 FHW--ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTNLAFTP 152 (423)
Q Consensus 77 ~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--~~~~~t~~y~a 152 (423)
.+. .+..+++..++.++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||+++..... ....++..|++
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~-i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~ 169 (256)
T cd08530 91 SKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK-ILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAKTQIGTPHYMA 169 (256)
T ss_pred HHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC-cccCCCCcceEEEecCCcEEEeeccchhhhccCCcccccCCccccC
Confidence 542 2356899999999999999999999999 999999999999999999999999998766543 23457889999
Q ss_pred ccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCC
Q 014484 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (423)
Q Consensus 153 PE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (423)
||.+.+..++.++|+||||+++++|++|..|+....... .............+...+.++.+++.+||+.+|++|
T Consensus 170 Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R 244 (256)
T cd08530 170 PEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQD-----LRYKVQRGKYPPIPPIYSQDLQNFIRSMLQVKPKLR 244 (256)
T ss_pred HHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-----HHHHHhcCCCCCCchhhCHHHHHHHHHHcCCCcccC
Confidence 999998889999999999999999999998876542211 111122222333445677889999999999999999
Q ss_pred CCHHHHHHH
Q 014484 233 PNAKSLVIS 241 (423)
Q Consensus 233 ps~~~vl~~ 241 (423)
||+.+++++
T Consensus 245 p~~~~~l~~ 253 (256)
T cd08530 245 PNCDKILAS 253 (256)
T ss_pred CCHHHHhcC
Confidence 999999876
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=277.12 Aligned_cols=237 Identities=16% Similarity=0.165 Sum_probs=184.5
Q ss_pred CCCCccceeeee--cceeeeeecCCChh---hHHHHHHHHHHHhcCCCCCccceEeEEEeC--CceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDL---GETLNLEEAKAVGNLRSERLANLIGCCYEA--DERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||.+.+. +..+++|.+..... ....+.+|+.++.+++||||+++++++... +..++||||+.+ +|.+
T Consensus 16 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv~e~~~~-~L~~ 94 (293)
T cd07843 16 GTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMVMEYVEH-DLKS 94 (293)
T ss_pred CCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEEehhcCc-CHHH
Confidence 889999999985 55677776644332 233567899999999999999999999887 789999999975 9998
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccc
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAF 150 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y 150 (423)
++.. ....+++..+..++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||++...... ....+++.|
T Consensus 95 ~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~-i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~ 172 (293)
T cd07843 95 LMET-MKQPFLQSEVKCLMLQLLSGVAHLHDNW-ILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLKPYTQLVVTLWY 172 (293)
T ss_pred HHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCCHHHEEECCCCcEEEeecCceeeccCCccccccccccccc
Confidence 8854 2346899999999999999999999999 999999999999999999999999998866543 223467889
Q ss_pred CCccccccCC-CCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchh-------------------------hhhcccc
Q 014484 151 TPPEYMRTGR-VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNF-------------------------LLLMDSA 204 (423)
Q Consensus 151 ~aPE~~~~~~-~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~-------------------------~~~~~~~ 204 (423)
+|||.+.+.. ++.++|+||||+++++|++|..||............. .......
T Consensus 173 ~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (293)
T cd07843 173 RAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQ 252 (293)
T ss_pred cCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchh
Confidence 9999887654 6889999999999999999998876432111000000 0000001
Q ss_pred ccCCCChh-HHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014484 205 LEGHFSND-EGTELVRLASRCLQSEARERPNAKSLVIS 241 (423)
Q Consensus 205 ~~~~~~~~-~~~~l~~li~~cl~~dp~~Rps~~~vl~~ 241 (423)
....++.. +++.+.++|.+||+.||++|||+.+++.+
T Consensus 253 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~ 290 (293)
T cd07843 253 LRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH 290 (293)
T ss_pred hhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence 11122222 47789999999999999999999999876
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-36 Score=278.68 Aligned_cols=236 Identities=17% Similarity=0.246 Sum_probs=185.9
Q ss_pred CCCCccceeeee--cceeeeeecCCChh---hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDL---GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
|+||.||.+.+. +..+++|++..... ..+.+.+|++++..++||||+++++++..++..++||||+++++|.++.
T Consensus 12 g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~ 91 (286)
T cd07846 12 GSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLE 91 (286)
T ss_pred CCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEecCCccHHHHHH
Confidence 889999999884 56777777654332 3456789999999999999999999999999999999999999998877
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC----ccccCcccCC
Q 014484 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK----SYSTNLAFTP 152 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~----~~~~t~~y~a 152 (423)
.. ...+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++....... ...++..|+|
T Consensus 92 ~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~a 168 (286)
T cd07846 92 KY--PNGLDESRVRKYLFQILRGIEFCHSHN-IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTDYVATRWYRA 168 (286)
T ss_pred hc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccccCcccceeeccC
Confidence 43 345899999999999999999999999 9999999999999999999999999987654332 2356789999
Q ss_pred ccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhh-----------h------ccccccC-------
Q 014484 153 PEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLL-----------L------MDSALEG------- 207 (423)
Q Consensus 153 PE~~~~~-~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~-----------~------~~~~~~~------- 207 (423)
||.+.+. .++.++||||||+++++|++|.+||......... ..... . .......
T Consensus 169 PE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (286)
T cd07846 169 PELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQL-YHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEP 247 (286)
T ss_pred cHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHH-HHHHHHhCCCchhhHHHhccchHhhccccccccCcch
Confidence 9988753 4788999999999999999999877543211000 00000 0 0000000
Q ss_pred --CCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014484 208 --HFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (423)
Q Consensus 208 --~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~ 241 (423)
...+.++..+.+++.+||+.+|.+||++.+++.+
T Consensus 248 ~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 283 (286)
T cd07846 248 LEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH 283 (286)
T ss_pred HHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence 0122456789999999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-36 Score=276.33 Aligned_cols=237 Identities=19% Similarity=0.250 Sum_probs=187.2
Q ss_pred CCCCccceeeee--cceeeeeecCCCh---hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
|+||.||++.+. +..+++|.+.... .....+.+|+++++.++|+||+++++++..++..++||||++++.+..+.
T Consensus 12 g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~ 91 (288)
T cd07833 12 GAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEYVERTLLELLE 91 (288)
T ss_pred cCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEecCCCCHHHHHH
Confidence 789999999885 5667777765432 23567889999999999999999999999999999999999987777665
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC-----ccccCcccC
Q 014484 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-----SYSTNLAFT 151 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-----~~~~t~~y~ 151 (423)
.. ...+++..+..++.|++.||.|||+++ ++|+||+|+||++++++.++|+|||++....... ...++..|+
T Consensus 92 ~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~ 168 (288)
T cd07833 92 AS--PGGLPPDAVRSYIWQLLQAIAYCHSHN-IIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTDYVATRWYR 168 (288)
T ss_pred hc--CCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCCEEEEeeecccccCCCccccccCcccccCCc
Confidence 32 445899999999999999999999999 9999999999999999999999999987655432 345678899
Q ss_pred CccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhc--hhh--------hh--ccc--------------c
Q 014484 152 PPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSK--NFL--------LL--MDS--------------A 204 (423)
Q Consensus 152 aPE~~~~~-~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~--~~~--------~~--~~~--------------~ 204 (423)
|||.+.+. .++.++|+||||+++|+|++|..||........... ... .. ... .
T Consensus 169 ~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (288)
T cd07833 169 APELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPES 248 (288)
T ss_pred CCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHH
Confidence 99999887 789999999999999999999988764321100000 000 00 000 0
Q ss_pred ccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014484 205 LEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (423)
Q Consensus 205 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~ 241 (423)
....++..++.++.++|.+||..+|++|||+++++.+
T Consensus 249 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 285 (288)
T cd07833 249 LERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH 285 (288)
T ss_pred HHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence 0001223347889999999999999999999999865
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-35 Score=267.65 Aligned_cols=232 Identities=19% Similarity=0.262 Sum_probs=193.2
Q ss_pred CCCCccceeeee--cceeeeeecCCCh---hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
|++|.||.+.+. +..+++|.+.... .....+.+|+++++.++|||++++++++..++..++||||+++++|.+++
T Consensus 11 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~ 90 (254)
T cd06627 11 GAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYAENGSLRQII 90 (254)
T ss_pred cCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecCCCCcHHHHH
Confidence 789999999874 5567777765554 35667899999999999999999999999999999999999999999998
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCCc----cccCcccCC
Q 014484 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS----YSTNLAFTP 152 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~----~~~t~~y~a 152 (423)
.. ...+++..+..++.|++.||.+||+++ ++||||+|+||+++.++.++|+|||++........ ..++..|+|
T Consensus 91 ~~--~~~l~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~ 167 (254)
T cd06627 91 KK--FGPFPESLVAVYVYQVLQGLAYLHEQG-VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASVVGTPYWMA 167 (254)
T ss_pred Hh--ccCCCHHHHHHHHHHHHHHHHHHhhCC-cccCCCCHHHEEECCCCCEEEeccccceecCCCcccccccccchhhcC
Confidence 64 357999999999999999999999999 99999999999999999999999999886654432 457889999
Q ss_pred ccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCC
Q 014484 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (423)
Q Consensus 153 PE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (423)
||...+..++.++|+||+|+++++|++|..|+...... ....... .......+...+..+.+++.+||..+|++|
T Consensus 168 pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R 242 (254)
T cd06627 168 PEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPM----AALFRIV-QDDHPPLPEGISPELKDFLMQCFQKDPNLR 242 (254)
T ss_pred HhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHH----HHHHHHh-ccCCCCCCCCCCHHHHHHHHHHHhCChhhC
Confidence 99988777899999999999999999999887643211 1111111 122233455667889999999999999999
Q ss_pred CCHHHHHHH
Q 014484 233 PNAKSLVIS 241 (423)
Q Consensus 233 ps~~~vl~~ 241 (423)
||+.+++.+
T Consensus 243 ~~~~~~l~~ 251 (254)
T cd06627 243 PTAKQLLKH 251 (254)
T ss_pred cCHHHHhcC
Confidence 999999864
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-35 Score=271.51 Aligned_cols=236 Identities=20% Similarity=0.221 Sum_probs=185.2
Q ss_pred CCCCccceeeee--cceeeeeecCCChh----hHHHHHHHHH---HHhcCCCCCccceEeEEEeCCceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDL----GETLNLEEAK---AVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~----~~~~~~~E~~---~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 72 (423)
|+||.||.+... +..+++|.+..... ....+..|.. .+....||||+.+.+++...+..++||||+.|++|
T Consensus 5 g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~g~~L 84 (278)
T cd05606 5 GGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDL 84 (278)
T ss_pred CCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCCCCcH
Confidence 899999998764 56788887654321 1223444443 34445799999999999999999999999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC--CccccCccc
Q 014484 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTNLAF 150 (423)
Q Consensus 73 ~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--~~~~~t~~y 150 (423)
.+++.. .+.+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++...... ....|+..|
T Consensus 85 ~~~l~~--~~~l~~~~~~~~~~ql~~~l~~lH~~~-i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y 161 (278)
T cd05606 85 HYHLSQ--HGVFSEAEMRFYAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGY 161 (278)
T ss_pred HHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EEcCCCCHHHEEECCCCCEEEccCcCccccCccCCcCcCCCcCC
Confidence 998853 457999999999999999999999999 999999999999999999999999998754432 234688999
Q ss_pred CCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCc
Q 014484 151 TPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEA 229 (423)
Q Consensus 151 ~aPE~~~~~-~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 229 (423)
+|||.+.++ .++.++||||+||++|+|++|..||........ ....... ......++...+.++.+++.+||..+|
T Consensus 162 ~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~--~~~~~~~-~~~~~~~~~~~s~~~~~li~~~l~~~p 238 (278)
T cd05606 162 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--HEIDRMT-LTMAVELPDSFSPELRSLLEGLLQRDV 238 (278)
T ss_pred cCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccch--HHHHHHh-hccCCCCCCcCCHHHHHHHHHHhhcCH
Confidence 999998754 589999999999999999999988865311111 1111111 112233445567889999999999999
Q ss_pred CCCC-----CHHHHHHHHH
Q 014484 230 RERP-----NAKSLVISLM 243 (423)
Q Consensus 230 ~~Rp-----s~~~vl~~l~ 243 (423)
.+|| ++.+++++.+
T Consensus 239 ~~R~~~~~~~~~~ll~~~~ 257 (278)
T cd05606 239 NRRLGCLGRGAQEVKEHPF 257 (278)
T ss_pred HhccCCCCCCHHHHHhCcc
Confidence 9999 9999987643
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-36 Score=268.46 Aligned_cols=224 Identities=19% Similarity=0.175 Sum_probs=180.6
Q ss_pred CCCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 1 MGGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 1 ~G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
.|.+|.||.+.+. +..+++|.+.... .+.+|...+....||||+++++++...+..++||||++|++|.+++.+
T Consensus 3 ~g~~~~v~~~~~~~~~~~~~~K~i~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 3 LGVIDKVLLVMDTRTQQTFILKGLRKSS----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred ccccceEEEEEEccCCcEEEEEeecchh----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 5899999999884 6667778765543 234455666667899999999999999999999999999999999864
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-CccccCcccCCccccc
Q 014484 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSYSTNLAFTPPEYMR 157 (423)
Q Consensus 79 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~~t~~y~aPE~~~ 157 (423)
...+++..+..++.|++.||.|||+++ ++||||||+||+++.++.++++|||.+...... ....++..|+|||.+.
T Consensus 79 --~~~l~~~~~~~~~~ql~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~aPE~~~ 155 (237)
T cd05576 79 --FLNIPEECVKRWAAEMVVALDALHREG-IVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENMYCAPEVGG 155 (237)
T ss_pred --hcCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCccccCCcccC
Confidence 346999999999999999999999999 999999999999999999999999987655433 2344567899999998
Q ss_pred cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCCH--
Q 014484 158 TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNA-- 235 (423)
Q Consensus 158 ~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~-- 235 (423)
+..++.++|+||+||++|+|++|..|+...... .........+..+++.+.++|.+||+.||++||++
T Consensus 156 ~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~ 225 (237)
T cd05576 156 ISEETEACDWWSLGAILFELLTGKTLVECHPSG----------INTHTTLNIPEWVSEEARSLLQQLLQFNPTERLGAGV 225 (237)
T ss_pred CCCCCchhhHHHHHHHHHHHHHCcchhhcCchh----------cccccccCCcccCCHHHHHHHHHHccCCHHHhcCCCc
Confidence 888999999999999999999998765432100 00011112344567789999999999999999986
Q ss_pred ---HHHHHH
Q 014484 236 ---KSLVIS 241 (423)
Q Consensus 236 ---~~vl~~ 241 (423)
++++.|
T Consensus 226 ~~~~~~~~h 234 (237)
T cd05576 226 AGVEDIKSH 234 (237)
T ss_pred cchHHHHcC
Confidence 666544
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-35 Score=273.59 Aligned_cols=238 Identities=16% Similarity=0.179 Sum_probs=185.6
Q ss_pred CCCCccceeeee--cceeeeeecCCChh---hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDL---GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
|++|.||++.+. +..+++|++..... ....+.+|+++++.++|||++++++++..++..++||||+. ++|.+++
T Consensus 10 g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~~-~~l~~~~ 88 (283)
T cd07835 10 GTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLD-LDLKKYM 88 (283)
T ss_pred CCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEeccC-cCHHHHH
Confidence 789999999874 67777777654331 23568899999999999999999999999999999999995 5999998
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccCC
Q 014484 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTP 152 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~a 152 (423)
.......+++..+..++.|++.||.|||+++ ++||||+|+||+++.++.++|+|||+++..... ....++..|+|
T Consensus 89 ~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~-~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~a 167 (283)
T cd07835 89 DSSPLTGLDPPLIKSYLYQLLQGIAYCHSHR-VLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTHEVVTLWYRA 167 (283)
T ss_pred hhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccCccccccCCCC
Confidence 6544346899999999999999999999999 999999999999999999999999998755422 22345788999
Q ss_pred ccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhh--------------------hhccc---cccCC
Q 014484 153 PEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFL--------------------LLMDS---ALEGH 208 (423)
Q Consensus 153 PE~~~~~-~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~--------------------~~~~~---~~~~~ 208 (423)
||.+.+. .++.++|+||||+++|+|++|..||.............. ..... .....
T Consensus 168 PE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (283)
T cd07835 168 PEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSK 247 (283)
T ss_pred CceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhh
Confidence 9988764 478899999999999999999988764321110000000 00000 00001
Q ss_pred CChhHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014484 209 FSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (423)
Q Consensus 209 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~ 241 (423)
.....+.++.++|.+||+.||.+|||+++++.+
T Consensus 248 ~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 280 (283)
T cd07835 248 VVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH 280 (283)
T ss_pred hcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 123345789999999999999999999999865
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-35 Score=279.71 Aligned_cols=236 Identities=14% Similarity=0.138 Sum_probs=184.2
Q ss_pred CCCCccceeeee--cceeeeeecCCC---hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCC------ceeEEEecCCCC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEAD------ERLLVAEFMPNE 70 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------~~~lv~e~~~~~ 70 (423)
|+||.||.+... +..+++|.+... ......+.+|+.+++.++||||+++++++.... ..|+||||+.+
T Consensus 27 g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~- 105 (353)
T cd07850 27 GAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQDVYLVMELMDA- 105 (353)
T ss_pred CCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCcEEEEEeccCC-
Confidence 899999999874 677888877543 233456778999999999999999999986543 46999999965
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC---ccccC
Q 014484 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK---SYSTN 147 (423)
Q Consensus 71 ~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---~~~~t 147 (423)
+|.+.+.. .+++..+..++.|++.||.|||++| ++||||||+||+++.++.++|+|||+++...... ...++
T Consensus 106 ~l~~~~~~----~l~~~~~~~~~~ql~~aL~~LH~~g-i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~ 180 (353)
T cd07850 106 NLCQVIQM----DLDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVT 180 (353)
T ss_pred CHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEECCCCCEEEccCccceeCCCCCCCCCCccc
Confidence 88888742 3899999999999999999999999 9999999999999999999999999998665432 34578
Q ss_pred cccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhch------------------hh-----------
Q 014484 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKN------------------FL----------- 198 (423)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~------------------~~----------- 198 (423)
..|+|||.+.+..++.++|||||||++|+|++|..||............ ..
T Consensus 181 ~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (353)
T cd07850 181 RYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAG 260 (353)
T ss_pred ccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCC
Confidence 8999999999889999999999999999999999888643211000000 00
Q ss_pred ----hhcccccc----CCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 199 ----LLMDSALE----GHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 199 ----~~~~~~~~----~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
........ ...+...+..+.++|.+||+.||++|||+.+++.|-.
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~ 313 (353)
T cd07850 261 YSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPY 313 (353)
T ss_pred cchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChh
Confidence 00000000 0001234667899999999999999999999998843
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-35 Score=272.12 Aligned_cols=237 Identities=16% Similarity=0.165 Sum_probs=181.2
Q ss_pred CCCCccceeeee--cceeeeeecCCChh--hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDL--GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~ 77 (423)
|+||.||.+... +..+++|++..... ....+.+|+.+++.++|+||+++++++..++..++||||+. ++|.+++.
T Consensus 16 g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~ 94 (291)
T cd07870 16 GSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEYMH-TDLAQYMI 94 (291)
T ss_pred cCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEeccc-CCHHHHHH
Confidence 889999999864 66788887754332 23467789999999999999999999999999999999996 57777764
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccCCc
Q 014484 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPP 153 (423)
Q Consensus 78 ~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~aP 153 (423)
. ....+++..+..++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||+++..... ....++..|+||
T Consensus 95 ~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aP 172 (291)
T cd07870 95 Q-HPGGLHPYNVRLFMFQLLRGLAYIHGQH-ILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYSSEVVTLWYRPP 172 (291)
T ss_pred h-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChHHEEEcCCCcEEEeccccccccCCCCCCCCCccccccccCC
Confidence 3 2345788899999999999999999999 999999999999999999999999998754322 223468899999
Q ss_pred cccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhh------------------hhccccccCCCC----
Q 014484 154 EYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFL------------------LLMDSALEGHFS---- 210 (423)
Q Consensus 154 E~~~~~-~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~---- 210 (423)
|.+.+. .++.++|||||||++|+|++|..||.........-.... ...........+
T Consensus 173 E~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (291)
T cd07870 173 DVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLR 252 (291)
T ss_pred ceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchh
Confidence 998754 478899999999999999999988754321100000000 000000000000
Q ss_pred -----hhHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014484 211 -----NDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (423)
Q Consensus 211 -----~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~ 241 (423)
...+.++.+++.+||..||.+|||+.+++.|
T Consensus 253 ~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h 288 (291)
T cd07870 253 VVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLH 288 (291)
T ss_pred hhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcC
Confidence 0124678999999999999999999999876
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-35 Score=270.73 Aligned_cols=236 Identities=18% Similarity=0.198 Sum_probs=181.5
Q ss_pred CCCCccceeeee--cceeeeeecCCCh--hhHHHHHHHHHHHhcCC-CCCccceEeEEEeC--CceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD--LGETLNLEEAKAVGNLR-SERLANLIGCCYEA--DERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~--~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~--~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||++... +..+++|.+.... .......+|+.++.++. |+||+++++++.++ +..++||||+.+ +|.+
T Consensus 10 g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~ 88 (282)
T cd07831 10 GTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFELMDM-NLYE 88 (282)
T ss_pred cccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEecCCc-cHHH
Confidence 889999999874 5667777765432 22334567999999994 99999999999988 889999999975 8888
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC---CccccCcccC
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFT 151 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~~t~~y~ 151 (423)
++.. ....+++..+..++.|++.||.|||+++ ++||||+|+||+++. +.++|+|||+++..... ....++..|+
T Consensus 89 ~l~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~~-i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~ 165 (282)
T cd07831 89 LIKG-RKRPLPEKRVKSYMYQLLKSLDHMHRNG-IFHRDIKPENILIKD-DILKLADFGSCRGIYSKPPYTEYISTRWYR 165 (282)
T ss_pred HHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecccCHHHEEEcC-CCeEEEecccccccccCCCcCCCCCCcccC
Confidence 7754 2356899999999999999999999999 999999999999999 99999999998765433 2345788999
Q ss_pred Ccccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhch----------hhhhccc--cccCC----------
Q 014484 152 PPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKN----------FLLLMDS--ALEGH---------- 208 (423)
Q Consensus 152 aPE~~~~-~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~----------~~~~~~~--~~~~~---------- 208 (423)
|||.+.+ ..++.++|||||||++|||++|..||............ +...... .....
T Consensus 166 aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (282)
T cd07831 166 APECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLR 245 (282)
T ss_pred ChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHH
Confidence 9997654 45788999999999999999999888653211100000 0000000 00000
Q ss_pred -CChhHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014484 209 -FSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (423)
Q Consensus 209 -~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~ 241 (423)
.....+.++.++|.+||+.+|++|||+++++.+
T Consensus 246 ~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 246 KLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred HHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 112457889999999999999999999999976
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-35 Score=272.89 Aligned_cols=237 Identities=16% Similarity=0.154 Sum_probs=181.7
Q ss_pred CCCCccceeeee--cceeeeeecCCChh---hHHHHHHHHHHHhcCC-CCCccceEeEEEeCCc-----eeEEEecCCCC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDL---GETLNLEEAKAVGNLR-SERLANLIGCCYEADE-----RLLVAEFMPNE 70 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~---~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~-----~~lv~e~~~~~ 70 (423)
|+||.||++.+. +..+++|....... ....+.+|+.++..+. ||||+++++++...+. .|+||||+++
T Consensus 12 g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~- 90 (295)
T cd07837 12 GTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLVFEYLDS- 90 (295)
T ss_pred cCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEEEEeeccCc-
Confidence 899999999874 56677776544322 2356788999999995 6999999999987766 7999999986
Q ss_pred CHHhhhccCC---CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecC-CCCeEEccccccccCCCC----C
Q 014484 71 TLAKHLFHWE---TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK-DGNPRLSSFGLMKNSRDG----K 142 (423)
Q Consensus 71 ~L~~~i~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~-~~~~kl~Dfg~~~~~~~~----~ 142 (423)
+|.+++.... +..+++..++.++.||+.||.|||+++ ++||||+|+||+++. ++.++|+|||+++..... .
T Consensus 91 ~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~-i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~~~~~~ 169 (295)
T cd07837 91 DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG-VMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPVKSYT 169 (295)
T ss_pred CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCChHHEEEecCCCeEEEeecccceecCCCccccC
Confidence 8988875322 346899999999999999999999999 999999999999998 889999999998754322 2
Q ss_pred ccccCcccCCcccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhcc-------------------
Q 014484 143 SYSTNLAFTPPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD------------------- 202 (423)
Q Consensus 143 ~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~------------------- 202 (423)
...+++.|+|||.+.+ ..++.++|+||||+++|+|++|..||......... ..+.....
T Consensus 170 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (295)
T cd07837 170 HEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQL-LHIFKLLGTPTEQVWPGVSKLRDWHEF 248 (295)
T ss_pred CcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHH-HHHHHHhCCCChhhCcchhhccchhhc
Confidence 2346788999998865 35789999999999999999999888653211100 00000000
Q ss_pred cccc----CCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014484 203 SALE----GHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (423)
Q Consensus 203 ~~~~----~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~ 241 (423)
+... ....+..+.++.++|.+||..||.+|||+.+++.|
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~ 291 (295)
T cd07837 249 PQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH 291 (295)
T ss_pred CcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0000 00112356789999999999999999999999876
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-35 Score=271.96 Aligned_cols=237 Identities=15% Similarity=0.173 Sum_probs=182.7
Q ss_pred CCCCccceeeee--cceeeeeecCCCh---hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
|++|.||++.+. +..+++|.+.... .....+.+|+++++.++||||+++++++..+...++||||+.+ +|.+++
T Consensus 13 g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~ 91 (294)
T PLN00009 13 GTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLDL-DLKKHM 91 (294)
T ss_pred CCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEecccc-cHHHHH
Confidence 789999999874 5667777664432 2235678999999999999999999999999999999999965 888887
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecC-CCCeEEccccccccCCCC----CccccCcccC
Q 014484 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK-DGNPRLSSFGLMKNSRDG----KSYSTNLAFT 151 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~-~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~ 151 (423)
.......+++..+..++.||+.||.|||+++ ++|+||+|+||+++. ++.+||+|||++...... ....+++.|+
T Consensus 92 ~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~-i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~ 170 (294)
T PLN00009 92 DSSPDFAKNPRLIKTYLYQILRGIAYCHSHR-VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYR 170 (294)
T ss_pred HhCCCCCcCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCcceEEEECCCCEEEEcccccccccCCCccccccCceeeccc
Confidence 6544445788999999999999999999999 999999999999985 457899999998754322 2335678999
Q ss_pred CccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccc--------------------cccC---
Q 014484 152 PPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS--------------------ALEG--- 207 (423)
Q Consensus 152 aPE~~~~~-~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~--- 207 (423)
|||.+.+. .++.++|||||||++|+|+||..||............+ ..... ....
T Consensus 171 ~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (294)
T PLN00009 171 APEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIF-RILGTPNEETWPGVTSLPDYKSAFPKWPPKDL 249 (294)
T ss_pred CHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-HHhCCCChhhccccccchhhhhhcccCCCCCH
Confidence 99988764 57899999999999999999998876432111110000 00000 0000
Q ss_pred -CCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014484 208 -HFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (423)
Q Consensus 208 -~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~ 241 (423)
...+..++++.+++.+||+.+|++||++.+++.+
T Consensus 250 ~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~ 284 (294)
T PLN00009 250 ATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH 284 (294)
T ss_pred HHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0112346789999999999999999999999976
|
|
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-35 Score=275.26 Aligned_cols=238 Identities=13% Similarity=0.156 Sum_probs=183.2
Q ss_pred CCCCccceeeee----cceeeeeecCCCh----hhHHHHHHHHHHHhcCCCCCccceEeEEEeC--CceeEEEecCCCCC
Q 014484 2 GGRCSKFSICWF----HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEA--DERLLVAEFMPNET 71 (423)
Q Consensus 2 G~~g~v~~~~~~----~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e~~~~~~ 71 (423)
|+||.||++.+. +..+++|.+.... .....+.+|+.++..++||||+++++++... ...++||||+.+ +
T Consensus 11 g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~ 89 (316)
T cd07842 11 GTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYLLFDYAEH-D 89 (316)
T ss_pred CCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEEEEeCCCc-C
Confidence 899999999984 4778888876632 2245678899999999999999999999988 779999999976 7
Q ss_pred HHhhhccC---CCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecC----CCCeEEccccccccCCCC---
Q 014484 72 LAKHLFHW---ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK----DGNPRLSSFGLMKNSRDG--- 141 (423)
Q Consensus 72 L~~~i~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~----~~~~kl~Dfg~~~~~~~~--- 141 (423)
|.+.+... ....+++..++.++.|++.||.|||+++ ++||||||+||+++. ++.+||+|||++......
T Consensus 90 l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~ 168 (316)
T cd07842 90 LWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW-VLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKP 168 (316)
T ss_pred HHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC-EeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCccc
Confidence 77766421 2346899999999999999999999999 999999999999999 899999999998765432
Q ss_pred ----CccccCcccCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHh--------hhchh-----------
Q 014484 142 ----KSYSTNLAFTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLI--------RSKNF----------- 197 (423)
Q Consensus 142 ----~~~~~t~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~--------~~~~~----------- 197 (423)
....++..|+|||.+.+. .++.++|||||||++++|++|.+||........ ....+
T Consensus 169 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 248 (316)
T cd07842 169 LADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKD 248 (316)
T ss_pred ccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhH
Confidence 223567889999988764 578999999999999999999988764321110 00000
Q ss_pred ----------hhhccccccCCCC---------h--hHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014484 198 ----------LLLMDSALEGHFS---------N--DEGTELVRLASRCLQSEARERPNAKSLVIS 241 (423)
Q Consensus 198 ----------~~~~~~~~~~~~~---------~--~~~~~l~~li~~cl~~dp~~Rps~~~vl~~ 241 (423)
...........++ . ..+.++.+++.+||+.||++|||+.+++.|
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~ 313 (316)
T cd07842 249 WPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEH 313 (316)
T ss_pred HHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 0000000001111 0 335678999999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=270.39 Aligned_cols=235 Identities=11% Similarity=0.095 Sum_probs=171.4
Q ss_pred CCCCccceeeeecc-----eeeeeecCCCh--hhHH----------HHHHHHHHHhcCCCCCccceEeEEEeCC----ce
Q 014484 2 GGRCSKFSICWFHC-----HLKSSVLESSD--LGET----------LNLEEAKAVGNLRSERLANLIGCCYEAD----ER 60 (423)
Q Consensus 2 G~~g~v~~~~~~~~-----~~~~~~~~~~~--~~~~----------~~~~E~~~l~~l~h~niv~~~~~~~~~~----~~ 60 (423)
||||.||++.+.+. .+++++..... ...+ ....+...+..++|+||+++++++.... ..
T Consensus 23 G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 102 (294)
T PHA02882 23 GGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGCGSFKRCRMYYR 102 (294)
T ss_pred CCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEeeeEecCCceEE
Confidence 99999999987533 23333321111 1011 1223444566779999999999876654 24
Q ss_pred eEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCC
Q 014484 61 LLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD 140 (423)
Q Consensus 61 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 140 (423)
+++++++.. ++.+.+.. ....++..+..++.|++.||.|||+++ ++||||||+|||++.++.++|+|||+++....
T Consensus 103 ~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-iiHrDiKp~Nill~~~~~~~l~DFGla~~~~~ 178 (294)
T PHA02882 103 FILLEKLVE-NTKEIFKR--IKCKNKKLIKNIMKDMLTTLEYIHEHG-ISHGDIKPENIMVDGNNRGYIIDYGIASHFII 178 (294)
T ss_pred EEEEehhcc-CHHHHHHh--hccCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCcEEEEEcCCceeecc
Confidence 688888754 77776643 234678889999999999999999999 99999999999999999999999999875431
Q ss_pred -----------CCccccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhH-Hhhh---chhhhhccccc
Q 014484 141 -----------GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALD-LIRS---KNFLLLMDSAL 205 (423)
Q Consensus 141 -----------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~-~~~~---~~~~~~~~~~~ 205 (423)
.....||+.|+|||++.+..++.++|||||||+++||++|..||...... .... ..+...+...
T Consensus 179 ~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~- 257 (294)
T PHA02882 179 HGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRLHEG- 257 (294)
T ss_pred CCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHHHHHhhhh-
Confidence 12245899999999999989999999999999999999999988654211 1000 0111111111
Q ss_pred cCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHH
Q 014484 206 EGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISL 242 (423)
Q Consensus 206 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l 242 (423)
......+++++.+++..||..+|++||++.++++.+
T Consensus 258 -~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 258 -KIKIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred -hhccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 011234568899999999999999999999998765
|
|
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-35 Score=271.46 Aligned_cols=238 Identities=16% Similarity=0.207 Sum_probs=185.0
Q ss_pred CCCCccceeeee--cceeeeeecCCCh--hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~ 77 (423)
|++|.||++.+. +..+++|.+.... .....+.+|+.++++++|+||+++++++...+..++||||+++ +|.+++.
T Consensus 11 g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~ 89 (284)
T cd07836 11 GTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYMDK-DLKKYMD 89 (284)
T ss_pred CCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCCc-cHHHHHH
Confidence 889999999984 5667777665432 2346778899999999999999999999999999999999986 8888875
Q ss_pred cCC-CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccCC
Q 014484 78 HWE-TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTP 152 (423)
Q Consensus 78 ~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~a 152 (423)
... ...+++..+..++.|++.||.|||+++ ++||||+|+||++++++.++|+|||++...... ....++..|++
T Consensus 90 ~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~ 168 (284)
T cd07836 90 THGVRGALDPNTVKSFTYQLLKGIAFCHENR-VLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSNEVVTLWYRA 168 (284)
T ss_pred hcCCCCCcCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHHHEEECCCCcEEEeecchhhhhcCCccccccccccccccC
Confidence 422 346899999999999999999999999 999999999999999999999999998754332 23456788999
Q ss_pred ccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhh-----------hcc-ccccCC-----------
Q 014484 153 PEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLL-----------LMD-SALEGH----------- 208 (423)
Q Consensus 153 PE~~~~~-~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~-----------~~~-~~~~~~----------- 208 (423)
||.+.+. .++.++|+|||||++|+|++|..||............... ... ......
T Consensus 169 PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (284)
T cd07836 169 PDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQ 248 (284)
T ss_pred hHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHH
Confidence 9988654 4788999999999999999999887643211110000000 000 000000
Q ss_pred CChhHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014484 209 FSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (423)
Q Consensus 209 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~ 241 (423)
..+..+..+.+++.+||+.||.+||++.+++.+
T Consensus 249 ~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 281 (284)
T cd07836 249 LFPHADPLGIDLLHRLLQLNPELRISAHDALQH 281 (284)
T ss_pred HhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 112346778999999999999999999999865
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-35 Score=265.10 Aligned_cols=231 Identities=21% Similarity=0.249 Sum_probs=191.3
Q ss_pred CCCCccceeeee--cceeeeeecCCChh----hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDL----GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.+. +..+++|++..... ....+..|+.+++.++|+||+++++.+..++..++||||+++++|.++
T Consensus 4 G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~ 83 (250)
T cd05123 4 GSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGELFSH 83 (250)
T ss_pred CCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcHHHH
Confidence 899999999885 56677776654332 455788999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccC
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFT 151 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~ 151 (423)
+.. .+.+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ....++..|+
T Consensus 84 l~~--~~~l~~~~~~~~~~qi~~~l~~lh~~~-~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 160 (250)
T cd05123 84 LSK--EGRFSEERARFYAAEIVLALEYLHSLG-IIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYL 160 (250)
T ss_pred HHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcCCcccc
Confidence 964 346899999999999999999999999 999999999999999999999999998765442 3345788999
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCC
Q 014484 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARE 231 (423)
Q Consensus 152 aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (423)
+||...+...+.++|+||||+++|+|++|..||........ ...... ....++...+.++.+++.+||..||++
T Consensus 161 ~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~----~~~~~~--~~~~~~~~~~~~l~~~i~~~l~~~p~~ 234 (250)
T cd05123 161 APEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEI----YEKILK--DPLRFPEFLSPEARDLISGLLQKDPTK 234 (250)
T ss_pred ChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHH----HHHHhc--CCCCCCCCCCHHHHHHHHHHhcCCHhh
Confidence 99999888889999999999999999999988865422111 111111 222345555788999999999999999
Q ss_pred CCCH---HHHHHH
Q 014484 232 RPNA---KSLVIS 241 (423)
Q Consensus 232 Rps~---~~vl~~ 241 (423)
||++ ++++.|
T Consensus 235 R~~~~~~~~l~~~ 247 (250)
T cd05123 235 RLGSGGAEEIKAH 247 (250)
T ss_pred CCCcccHHHHHhC
Confidence 9999 666654
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-35 Score=271.35 Aligned_cols=231 Identities=19% Similarity=0.229 Sum_probs=191.9
Q ss_pred CCCCccceeeee--cceeeeeecCCC----hhhHHHHHHHHHHHhcCC-CCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS----DLGETLNLEEAKAVGNLR-SERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~----~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||++.+. +..++++++... ......+.+|++++.+++ ||||+++++++..++..++|||++++++|.+
T Consensus 12 g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 91 (280)
T cd05581 12 GSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLEYAPNGELLQ 91 (280)
T ss_pred CCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEEcCCCCCcHHH
Confidence 899999999884 677777877553 233467889999999998 9999999999999999999999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC------------
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK------------ 142 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~------------ 142 (423)
++.+ .+.+++..++.++.|++.||.+||+++ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 92 ~l~~--~~~l~~~~~~~i~~ql~~~l~~Lh~~~-~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~ 168 (280)
T cd05581 92 YIRK--YGSLDEKCTRFYAAEILLALEYLHSKG-IIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNI 168 (280)
T ss_pred HHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHeEECCCCCEEecCCccccccCCccccccCCCCCccc
Confidence 9964 347999999999999999999999999 9999999999999999999999999887554322
Q ss_pred ------------ccccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCC
Q 014484 143 ------------SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFS 210 (423)
Q Consensus 143 ------------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (423)
...++..|+|||.+.+..++.++|+||||++++++++|..|+...... ..+.... .....++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~----~~~~~~~--~~~~~~~ 242 (280)
T cd05581 169 DSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEY----LTFQKIL--KLEYSFP 242 (280)
T ss_pred cccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHH----HHHHHHH--hcCCCCC
Confidence 124578899999998888999999999999999999999887654211 1111111 1223345
Q ss_pred hhHHHHHHHHHHHhcccCcCCCCCH----HHHHHH
Q 014484 211 NDEGTELVRLASRCLQSEARERPNA----KSLVIS 241 (423)
Q Consensus 211 ~~~~~~l~~li~~cl~~dp~~Rps~----~~vl~~ 241 (423)
...++.+.+++.+||+.||.+|||+ ++++.|
T Consensus 243 ~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~ 277 (280)
T cd05581 243 PNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAH 277 (280)
T ss_pred CccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcC
Confidence 5667889999999999999999999 888876
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-35 Score=269.63 Aligned_cols=236 Identities=21% Similarity=0.224 Sum_probs=185.4
Q ss_pred CCCCccceeeee--cceeeeeecCCCh---hhHHHHHHHHHHHhcCCCCCccceEeEEEeC--CceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEA--DERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||++.+. +..+++|.+.... .....+.+|+.+++.++|+|++++++++... +..++||||+++ +|.+
T Consensus 10 g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~ 88 (287)
T cd07840 10 GTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEYMDH-DLTG 88 (287)
T ss_pred CCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEeccccc-cHHH
Confidence 889999999985 4667777776542 2345688999999999999999999999988 789999999975 8998
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC-----ccccCcc
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-----SYSTNLA 149 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-----~~~~t~~ 149 (423)
++... ...+++..++.++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++....... ...++..
T Consensus 89 ~~~~~-~~~~~~~~~~~i~~~i~~al~~LH~~~-~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~ 166 (287)
T cd07840 89 LLDSP-EVKFTESQIKCYMKQLLEGLQYLHSNG-ILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTNRVITLW 166 (287)
T ss_pred HHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCcHHHeEEcCCCCEEEccccceeeccCCCcccccccccccc
Confidence 88542 357999999999999999999999999 9999999999999999999999999988665432 2345778
Q ss_pred cCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccc-------------------------
Q 014484 150 FTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS------------------------- 203 (423)
Q Consensus 150 y~aPE~~~~~-~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~------------------------- 203 (423)
|+|||.+.+. .++.++||||||+++++|++|..||........... .......
T Consensus 167 y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (287)
T cd07840 167 YRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEK-IFELCGSPTDENWPGVSKLPWFENLKPKKPYK 245 (287)
T ss_pred cCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHH-HHHHhCCCchhhccccccchhhhhccccccch
Confidence 9999987653 578999999999999999999988764322111100 0000000
Q ss_pred -cccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014484 204 -ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (423)
Q Consensus 204 -~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~ 241 (423)
.....+...+++++.+++.+||+.+|.+||++++++.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 284 (287)
T cd07840 246 RRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH 284 (287)
T ss_pred hHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 00000111126789999999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-37 Score=260.10 Aligned_cols=237 Identities=16% Similarity=0.199 Sum_probs=187.3
Q ss_pred CCCCccceeeee--cceeeeeecC--CChhhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLE--SSDLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~--~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
|+||+|.+.... +..+++|++. .......+++.|.+...+- +.||||++||.+...+..|+.||+|.- ||+.+.
T Consensus 75 G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd~-SlDklY 153 (361)
T KOG1006|consen 75 GAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMDI-SLDKLY 153 (361)
T ss_pred CcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHhh-hHHHHH
Confidence 899999999885 6667776653 3445677899999987777 789999999999999999999999965 877655
Q ss_pred c---cCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC---CccccCccc
Q 014484 77 F---HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAF 150 (423)
Q Consensus 77 ~---~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~~t~~y 150 (423)
+ ...+..+++..+-.|..-.+.||.||...-+|||||+||+|||++..|.+||||||++-.+..+ ....|...|
T Consensus 154 k~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiAkT~daGCrpY 233 (361)
T KOG1006|consen 154 KRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIAKTVDAGCRPY 233 (361)
T ss_pred HHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHHHHHhhhccCCccc
Confidence 4 2245679999888999999999999998766999999999999999999999999998766544 335688899
Q ss_pred CCcccccc--CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccc-cCCCC---hhHHHHHHHHHHHh
Q 014484 151 TPPEYMRT--GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSAL-EGHFS---NDEGTELVRLASRC 224 (423)
Q Consensus 151 ~aPE~~~~--~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~l~~li~~c 224 (423)
||||.+.. ..|+.+||+||||++|+|+.||..|+..+.. .- ..+..++.... .-..+ ...+..+..+|..|
T Consensus 234 mAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s--vf-eql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintC 310 (361)
T KOG1006|consen 234 MAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS--VF-EQLCQVVIGDPPILLFDKECVHYSFSMVRFINTC 310 (361)
T ss_pred cChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH--HH-HHHHHHHcCCCCeecCcccccccCHHHHHHHHHH
Confidence 99998763 3599999999999999999999988776522 11 11112221111 11112 23678899999999
Q ss_pred cccCcCCCCCHHHHHHHH
Q 014484 225 LQSEARERPNAKSLVISL 242 (423)
Q Consensus 225 l~~dp~~Rps~~~vl~~l 242 (423)
|.+|-+.||++.++..+-
T Consensus 311 l~Kd~~~Rpky~~Lk~~~ 328 (361)
T KOG1006|consen 311 LIKDRSDRPKYDDLKKFP 328 (361)
T ss_pred hhcccccCcchhhhhcCc
Confidence 999999999999998663
|
|
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-35 Score=267.26 Aligned_cols=234 Identities=14% Similarity=0.197 Sum_probs=185.6
Q ss_pred CCCCCccceeeeec--ceeeeeecCC------ChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCH
Q 014484 1 MGGRCSKFSICWFH--CHLKSSVLES------SDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (423)
Q Consensus 1 ~G~~g~v~~~~~~~--~~~~~~~~~~------~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 72 (423)
.|+||.||.+.+.. ...+++++.. .......+..|+.++..++||||+++++++.+....++||||+++++|
T Consensus 10 ~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l 89 (260)
T cd08222 10 KGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIITEYCEGRDL 89 (260)
T ss_pred CCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEEEeCCCCCH
Confidence 38999999988753 2233333322 122334567899999999999999999999999999999999999999
Q ss_pred Hhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----Ccccc
Q 014484 73 AKHLFH--WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYST 146 (423)
Q Consensus 73 ~~~i~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~ 146 (423)
.+++.. .....+++..+..++.|++.||.|||+++ ++|+||+|+||++++ +.++|+|||++...... ....+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~~~~~~~~~ 167 (260)
T cd08222 90 DCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR-ILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSCDLATTFTG 167 (260)
T ss_pred HHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC-ccccCCChhheEeec-CCEeecccCceeecCCCcccccCCCC
Confidence 988853 23457999999999999999999999999 999999999999975 56999999998765432 23457
Q ss_pred CcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcc
Q 014484 147 NLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (423)
Q Consensus 147 t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (423)
+..|+|||.+.+..++.++|+||+|+++|+|++|..|+....... ...... .......+..++.++.++|.+||+
T Consensus 168 ~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~ 242 (260)
T cd08222 168 TPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLS----VVLRIV-EGPTPSLPETYSRQLNSIMQSMLN 242 (260)
T ss_pred CcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHH----HHHHHH-cCCCCCCcchhcHHHHHHHHHHhc
Confidence 889999999988888999999999999999999998876432111 111111 122223455677899999999999
Q ss_pred cCcCCCCCHHHHHHH
Q 014484 227 SEARERPNAKSLVIS 241 (423)
Q Consensus 227 ~dp~~Rps~~~vl~~ 241 (423)
.||++||++.++++|
T Consensus 243 ~~p~~Rp~~~~il~~ 257 (260)
T cd08222 243 KDPSLRPSAAEILRN 257 (260)
T ss_pred CChhhCcCHHHHhhC
Confidence 999999999999976
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-35 Score=270.12 Aligned_cols=235 Identities=18% Similarity=0.221 Sum_probs=186.8
Q ss_pred CCCCccceeee-----ecceeeeeecCCCh-----hhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCC
Q 014484 2 GGRCSKFSICW-----FHCHLKSSVLESSD-----LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNE 70 (423)
Q Consensus 2 G~~g~v~~~~~-----~~~~~~~~~~~~~~-----~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~ 70 (423)
|+||.||.+.. .+..+++|++.... ...+.+.+|++++.++ +|+||+.+++++..+...++||||++++
T Consensus 11 G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 90 (290)
T cd05613 11 GAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLHLILDYINGG 90 (290)
T ss_pred CCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEEEEEecCCCC
Confidence 89999999876 35667888775432 2345678899999999 6999999999999999999999999999
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-----Cccc
Q 014484 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYS 145 (423)
Q Consensus 71 ~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~ 145 (423)
+|.+++.. ...+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||++...... ....
T Consensus 91 ~L~~~l~~--~~~l~~~~~~~~~~qi~~al~~lH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 167 (290)
T cd05613 91 ELFTHLSQ--RERFKEQEVQIYSGEIVLALEHLHKLG-IIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVERAYSFC 167 (290)
T ss_pred cHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHeEECCCCCEEEeeCccceeccccccccccccc
Confidence 99999864 456889999999999999999999999 999999999999999999999999998765432 2345
Q ss_pred cCcccCCccccccC--CCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHH
Q 014484 146 TNLAFTPPEYMRTG--RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASR 223 (423)
Q Consensus 146 ~t~~y~aPE~~~~~--~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 223 (423)
++..|+|||.+.+. .++.++||||||+++|+|++|..|+......... ......... ....++..+++.+.+++.+
T Consensus 168 ~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~ll~~ 245 (290)
T cd05613 168 GTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQ-AEISRRILK-SEPPYPQEMSALAKDIIQR 245 (290)
T ss_pred CCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccH-HHHHHHhhc-cCCCCCccCCHHHHHHHHH
Confidence 78899999988753 4778999999999999999999887532111000 111111111 1123445567889999999
Q ss_pred hcccCcCCCC-----CHHHHHHH
Q 014484 224 CLQSEARERP-----NAKSLVIS 241 (423)
Q Consensus 224 cl~~dp~~Rp-----s~~~vl~~ 241 (423)
||+.||++|| ++++++.+
T Consensus 246 ~l~~~p~~R~~~~~~~~~~l~~~ 268 (290)
T cd05613 246 LLMKDPKKRLGCGPSDADEIKKH 268 (290)
T ss_pred HhcCCHHHhcCCCCCCHHHHHcC
Confidence 9999999997 78888876
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-35 Score=270.01 Aligned_cols=238 Identities=17% Similarity=0.221 Sum_probs=185.6
Q ss_pred CCCCccceeeee--cceeeeeecCCChh--hHHHHHHHHHHHhcCC-CCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDL--GETLNLEEAKAVGNLR-SERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~--~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
|++|.||.+.+. +..+++|.+..... ......+|+..+..++ |+||+++++++..++..++||||+ +++|.+++
T Consensus 10 g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~~ 88 (283)
T cd07830 10 GTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM-EGNLYQLM 88 (283)
T ss_pred CCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC-CCCHHHHH
Confidence 899999999984 56677777655433 2334567999999998 999999999999999999999999 77999988
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC---CccccCcccCCc
Q 014484 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTPP 153 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~~t~~y~aP 153 (423)
....+..+++..+..++.|++.+|.|||+++ ++|+||+|+||++++++.++|+|||++...... ....++..|+||
T Consensus 89 ~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~-i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~aP 167 (283)
T cd07830 89 KDRKGKPFSESVIRSIIYQILQGLAHIHKHG-FFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYTDYVSTRWYRAP 167 (283)
T ss_pred HhcccccCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChhhEEEcCCCCEEEeecccceeccCCCCcCCCCCcccccCc
Confidence 6544457899999999999999999999999 999999999999999999999999998766543 234578899999
Q ss_pred ccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhch-----------------hhhhcccccc-------CC
Q 014484 154 EYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKN-----------------FLLLMDSALE-------GH 208 (423)
Q Consensus 154 E~~~~-~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~-------~~ 208 (423)
|.+.+ ..++.++|+||||+++++|++|.+||+........... .......... ..
T Consensus 168 E~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (283)
T cd07830 168 EILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQ 247 (283)
T ss_pred eeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHH
Confidence 98754 45789999999999999999999887653211110000 0000000000 00
Q ss_pred CChhHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014484 209 FSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (423)
Q Consensus 209 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~ 241 (423)
.....+.++.+++.+||+.||++|||+++++.+
T Consensus 248 ~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 248 LIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred HcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 011125779999999999999999999999876
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=267.64 Aligned_cols=238 Identities=16% Similarity=0.162 Sum_probs=184.9
Q ss_pred CCCCccceeeee--cceeeeeecCCChh---hHHHHHHHHHHHhcC---CCCCccceEeEEEeCCc-----eeEEEecCC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDL---GETLNLEEAKAVGNL---RSERLANLIGCCYEADE-----RLLVAEFMP 68 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~---~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~~-----~~lv~e~~~ 68 (423)
|+||.||++.+. +..+++|.+..... ....+.+|+.++..+ +||||+++++++...+. .+++|||+.
T Consensus 10 g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~l~~e~~~ 89 (287)
T cd07838 10 GAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLTLVFEHVD 89 (287)
T ss_pred cCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCceeEEEehhcc
Confidence 789999999985 57778877753321 234566788777666 59999999999998876 899999997
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC---ccc
Q 014484 69 NETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK---SYS 145 (423)
Q Consensus 69 ~~~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---~~~ 145 (423)
+ +|.+++.......+++..++.++.|++.||.|||+++ ++|+||+|+||+++.++.++|+|||++....... ...
T Consensus 90 ~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~-i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~ 167 (287)
T cd07838 90 Q-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHR-IVHRDLKPQNILVTSDGQVKIADFGLARIYSFEMALTSVV 167 (287)
T ss_pred c-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCChhhEEEccCCCEEEeccCcceeccCCccccccc
Confidence 5 8998886544456999999999999999999999999 9999999999999999999999999987664332 234
Q ss_pred cCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhh------------------cccccc-
Q 014484 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLL------------------MDSALE- 206 (423)
Q Consensus 146 ~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~------------------~~~~~~- 206 (423)
++..|+|||.+.+..++.++|+|||||++|+|++|.+||................ ......
T Consensus 168 ~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (287)
T cd07838 168 VTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPR 247 (287)
T ss_pred ccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhccccccc
Confidence 6788999999998889999999999999999999988776542211111000000 000000
Q ss_pred --CCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014484 207 --GHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (423)
Q Consensus 207 --~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~ 241 (423)
....+..++.+.++|.+||+.||.+||++.+++.|
T Consensus 248 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~ 284 (287)
T cd07838 248 SFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH 284 (287)
T ss_pred chhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence 01112346788999999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-35 Score=270.25 Aligned_cols=237 Identities=19% Similarity=0.213 Sum_probs=186.9
Q ss_pred CCCCccceeeee--cceeeeeecCCChh---hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDL---GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
|++|.||++... +..+++|.+..... ....+.+|+++++.++|+||+++++++..++..++||||+++ +|.+++
T Consensus 10 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~~l 88 (283)
T cd05118 10 GTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMDT-DLYKLI 88 (283)
T ss_pred CCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccCC-CHHHHH
Confidence 789999999874 56677776654332 356788999999999999999999999999999999999976 888888
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC----ccccCcccCC
Q 014484 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK----SYSTNLAFTP 152 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~----~~~~t~~y~a 152 (423)
.. ....+++..+..++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||.+....... ...++..|+|
T Consensus 89 ~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~ 166 (283)
T cd05118 89 KD-RQRGLPESLIKSYLYQLLQGLAFCHSHG-ILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTHYVVTRWYRA 166 (283)
T ss_pred Hh-hcccCCHHHHHHHHHHHHHHHHHHHHCC-eeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccCccCcccccC
Confidence 54 2357999999999999999999999999 9999999999999999999999999987665432 2456788999
Q ss_pred ccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhh-----------hcc----------c---cccC
Q 014484 153 PEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLL-----------LMD----------S---ALEG 207 (423)
Q Consensus 153 PE~~~~~-~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~-----------~~~----------~---~~~~ 207 (423)
||.+.+. .++.++|+||||+++|+|++|+.||+.............. ... . ....
T Consensus 167 PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (283)
T cd05118 167 PELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLP 246 (283)
T ss_pred cHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHH
Confidence 9998876 6899999999999999999999887643211100000000 000 0 0000
Q ss_pred CCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014484 208 HFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (423)
Q Consensus 208 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~ 241 (423)
...+.++.++.++|.+||+.||.+||++.+++.+
T Consensus 247 ~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~ 280 (283)
T cd05118 247 KLFPNASPQALDLLSQMLHYDPHKRITAEQALAH 280 (283)
T ss_pred HhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 1122356789999999999999999999999876
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-35 Score=277.40 Aligned_cols=236 Identities=16% Similarity=0.199 Sum_probs=182.0
Q ss_pred CCCCccceeeee--cceeeeeecCCC--hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCC-----ceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEAD-----ERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-----~~~lv~e~~~~~~L 72 (423)
|+||.||.+.+. +..+++|.+... ......+.+|+.+++.++||||+++++++.... ..++||||+.+ +|
T Consensus 16 G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l 94 (336)
T cd07849 16 GAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVYIVQELMET-DL 94 (336)
T ss_pred cCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEEEEehhccc-CH
Confidence 899999999874 667888876532 233556788999999999999999999876543 47999999975 88
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC-------ccc
Q 014484 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-------SYS 145 (423)
Q Consensus 73 ~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-------~~~ 145 (423)
.+.+. .+.+++..+..++.|++.||.+||+++ ++||||||+||+++.++.++|+|||++....... ...
T Consensus 95 ~~~~~---~~~l~~~~~~~i~~ql~~aL~~LH~~~-ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~ 170 (336)
T cd07849 95 YKLIK---TQHLSNDHIQYFLYQILRGLKYIHSAN-VLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHTGFLTEYV 170 (336)
T ss_pred HHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHEEECCCCCEEECcccceeeccccccccCCcCCcC
Confidence 88873 456999999999999999999999999 9999999999999999999999999987654321 235
Q ss_pred cCcccCCcccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhh-----------hchhhhhcc-----------
Q 014484 146 TNLAFTPPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIR-----------SKNFLLLMD----------- 202 (423)
Q Consensus 146 ~t~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~-----------~~~~~~~~~----------- 202 (423)
++..|+|||.+.+ ..++.++|||||||++|+|++|..||......... ......+..
T Consensus 171 ~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (336)
T cd07849 171 ATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLP 250 (336)
T ss_pred cCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcC
Confidence 6889999998754 45889999999999999999999888643111000 000000000
Q ss_pred ccccCC---CChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHH
Q 014484 203 SALEGH---FSNDEGTELVRLASRCLQSEARERPNAKSLVISL 242 (423)
Q Consensus 203 ~~~~~~---~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l 242 (423)
...... ..+..++++.+++.+||+.||.+|||+.+++.|-
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp 293 (336)
T cd07849 251 FKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHP 293 (336)
T ss_pred cCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCc
Confidence 000000 0122457799999999999999999999999883
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=272.25 Aligned_cols=240 Identities=18% Similarity=0.179 Sum_probs=183.7
Q ss_pred CCCCccceeeee--cceeeeeecCCChhh---HHHHHHHHHHHhcCCCCCccceEeEEEeC--CceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLG---ETLNLEEAKAVGNLRSERLANLIGCCYEA--DERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||.+.+. +..+++|.+...... ...+.+|+.++++++|+||+++++++... +..++||||+.+ +|.+
T Consensus 18 g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~ 96 (309)
T cd07845 18 GTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLVMEYCEQ-DLAS 96 (309)
T ss_pred cCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEEEecCCC-CHHH
Confidence 889999999874 667777776433221 23466899999999999999999999765 457999999975 8888
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC----ccccCccc
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK----SYSTNLAF 150 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~----~~~~t~~y 150 (423)
++.. ....+++.++..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++....... ...++..|
T Consensus 97 ~l~~-~~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y 174 (309)
T cd07845 97 LLDN-MPTPFSESQVKCLMLQLLRGLQYLHENF-IIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKPMTPKVVTLWY 174 (309)
T ss_pred HHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEECccceeeecCCccCCCCcccccccc
Confidence 8854 2356899999999999999999999999 9999999999999999999999999988665431 22346789
Q ss_pred CCcccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhcc-----------------c-ccc-CCC-
Q 014484 151 TPPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD-----------------S-ALE-GHF- 209 (423)
Q Consensus 151 ~aPE~~~~-~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~-----------------~-~~~-~~~- 209 (423)
+|||.+.+ ..++.++|||||||++|+|++|.+||........... ...... . ... ...
T Consensus 175 ~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (309)
T cd07845 175 RAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDL-IIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYN 253 (309)
T ss_pred cChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HHHhcCCCChhhchhhhcccccccccccCCCCC
Confidence 99998875 4578999999999999999999988864321111000 000000 0 000 000
Q ss_pred -----ChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhh
Q 014484 210 -----SNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 245 (423)
Q Consensus 210 -----~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~ 245 (423)
....++++.++|.+||+.||++|||+++++.|.+-.
T Consensus 254 ~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~ 294 (309)
T cd07845 254 NLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFK 294 (309)
T ss_pred chHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhc
Confidence 011367789999999999999999999999886543
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=269.09 Aligned_cols=236 Identities=18% Similarity=0.224 Sum_probs=185.2
Q ss_pred CCCCccceeeee-----cceeeeeecCCCh-----hhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCC
Q 014484 2 GGRCSKFSICWF-----HCHLKSSVLESSD-----LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNE 70 (423)
Q Consensus 2 G~~g~v~~~~~~-----~~~~~~~~~~~~~-----~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~ 70 (423)
|++|.||.+.+. +..++++++.... ...+.+.+|+.++.++ +||||+.+++.+..+...++||||+.++
T Consensus 11 G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 90 (288)
T cd05583 11 GAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLHLILDYVNGG 90 (288)
T ss_pred CCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEEEEEecCCCC
Confidence 899999998763 3557777665322 2345678999999999 6999999999999999999999999999
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC-----ccc
Q 014484 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-----SYS 145 (423)
Q Consensus 71 ~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-----~~~ 145 (423)
+|.+++.. ...+++..+..++.|++.+|.|||+.+ ++||||+|.||+++.++.++|+|||+++...... ...
T Consensus 91 ~L~~~~~~--~~~~~~~~~~~~~~ql~~~l~~lH~~~-~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 167 (288)
T cd05583 91 ELFTHLYQ--REHFTESEVRVYIAEIVLALDHLHQLG-IIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEERAYSFC 167 (288)
T ss_pred cHHHHHhh--cCCcCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHeEECCCCCEEEEECcccccccccccccccccc
Confidence 99999853 356899999999999999999999999 9999999999999999999999999987644322 235
Q ss_pred cCcccCCccccccCC--CCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHH
Q 014484 146 TNLAFTPPEYMRTGR--VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASR 223 (423)
Q Consensus 146 ~t~~y~aPE~~~~~~--~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 223 (423)
++..|++||.+.+.. .+.++|+||||+++++|++|..|+.................. .....+...+.++.+++.+
T Consensus 168 ~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~ 245 (288)
T cd05583 168 GTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILK--SKPPFPKTMSAEARDFIQK 245 (288)
T ss_pred CCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHc--cCCCCCcccCHHHHHHHHH
Confidence 788999999987655 788999999999999999999887532111111111111111 1123444567789999999
Q ss_pred hcccCcCCCCCHHHHHHHH
Q 014484 224 CLQSEARERPNAKSLVISL 242 (423)
Q Consensus 224 cl~~dp~~Rps~~~vl~~l 242 (423)
||+.||++|||+.++...|
T Consensus 246 ~l~~~p~~R~t~~~~~~~l 264 (288)
T cd05583 246 LLEKDPKKRLGANGADEIK 264 (288)
T ss_pred HhcCCHhhccCcchHHHHh
Confidence 9999999999976665443
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-35 Score=283.78 Aligned_cols=236 Identities=13% Similarity=0.172 Sum_probs=197.8
Q ss_pred CCCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHHhcC-CCCCccceEeEEEe-----CCceeEEEecCCCCCH
Q 014484 1 MGGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNL-RSERLANLIGCCYE-----ADERLLVAEFMPNETL 72 (423)
Q Consensus 1 ~G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~-----~~~~~lv~e~~~~~~L 72 (423)
.|.+|.||++... +.-.++|++.......+....|.++|+.+ .|||++.++++|.. ++.+|||||||.|||.
T Consensus 29 ~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC~gGSV 108 (953)
T KOG0587|consen 29 NGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLVMEFCGGGSV 108 (953)
T ss_pred eccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEEeeccCCccH
Confidence 3778888888764 66677788777777778888999999999 79999999999975 4569999999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCc
Q 014484 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNL 148 (423)
Q Consensus 73 ~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~ 148 (423)
.++++...+.++.|+.+..|++.++.|+.+||.+. ++|||||-.|||++.+|.+||+|||++...... .+..||+
T Consensus 109 TDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nk-viHRDikG~NiLLT~e~~VKLvDFGvSaQldsT~grRnT~iGtP 187 (953)
T KOG0587|consen 109 TDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNK-VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDSTVGRRNTFIGTP 187 (953)
T ss_pred HHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcc-eeeecccCceEEEeccCcEEEeeeeeeeeeecccccccCcCCCc
Confidence 99998777889999999999999999999999999 999999999999999999999999999876644 4577999
Q ss_pred ccCCccccccC-----CCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhcccc-ccCCCChhHHHHHHHHHH
Q 014484 149 AFTPPEYMRTG-----RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSA-LEGHFSNDEGTELVRLAS 222 (423)
Q Consensus 149 ~y~aPE~~~~~-----~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~ 222 (423)
.|||||++... .|+.++|+||||++..||..|.+|+-.- .....+..+.... ..-.-+...+.++.+||+
T Consensus 188 ~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~Dm----HPmraLF~IpRNPPPkLkrp~kWs~~FndFIs 263 (953)
T KOG0587|consen 188 YWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDM----HPMRALFLIPRNPPPKLKRPKKWSKKFNDFIS 263 (953)
T ss_pred ccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCc----chhhhhccCCCCCCccccchhhHHHHHHHHHH
Confidence 99999988643 3788999999999999999999776442 2333333332221 111225568999999999
Q ss_pred HhcccCcCCCCCHHHHHHH
Q 014484 223 RCLQSEARERPNAKSLVIS 241 (423)
Q Consensus 223 ~cl~~dp~~Rps~~~vl~~ 241 (423)
.||.+|..+||++.+++.|
T Consensus 264 ~cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 264 TCLVKDYEQRPSTEELLKH 282 (953)
T ss_pred HHHhhccccCcchhhhccC
Confidence 9999999999999999876
|
|
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-34 Score=268.61 Aligned_cols=236 Identities=17% Similarity=0.255 Sum_probs=184.6
Q ss_pred CCCCccceeeee--cceeeeeecCCCh--hhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD--LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
|+||.||.+.+. +..+++|.+.... .....+.+|+.++..+ .||||+++++++..+...++||||+.+ +|..++
T Consensus 26 g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~l~ 104 (296)
T cd06618 26 GTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICMELMST-CLDKLL 104 (296)
T ss_pred cCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEeeccCc-CHHHHH
Confidence 899999999986 7778888875432 2345667788877777 599999999999999999999999955 787776
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHc-CCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC---ccccCcccCC
Q 014484 77 FHWETQPMKWAMRLRVALYLAQALEYCSS-KGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK---SYSTNLAFTP 152 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---~~~~t~~y~a 152 (423)
.. ....+++..+..++.|++.||.|||+ .+ ++||||+|+||+++.++.++|+|||++....... ...++..|+|
T Consensus 105 ~~-~~~~l~~~~~~~i~~~i~~~l~~lH~~~~-i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~y~a 182 (296)
T cd06618 105 KR-IQGPIPEDILGKMTVAIVKALHYLKEKHG-VIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAKTRSAGCAAYMA 182 (296)
T ss_pred HH-hcCCCCHHHHHHHHHHHHHHHHHHHhhCC-EecCCCcHHHEEEcCCCCEEECccccchhccCCCcccCCCCCccccC
Confidence 54 23479999999999999999999997 57 9999999999999999999999999987654322 2346788999
Q ss_pred ccccccCC----CCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccc-cCCCChhHHHHHHHHHHHhccc
Q 014484 153 PEYMRTGR----VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSAL-EGHFSNDEGTELVRLASRCLQS 227 (423)
Q Consensus 153 PE~~~~~~----~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~ 227 (423)
||.+.+.. ++.++||||||+++|+|++|..||...... ............ .......++.++.+++.+||..
T Consensus 183 PE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~ 259 (296)
T cd06618 183 PERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE---FEVLTKILQEEPPSLPPNEGFSPDFCSFVDLCLTK 259 (296)
T ss_pred HhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH---HHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHHccC
Confidence 99987553 788999999999999999999887642111 011111111111 1111123577899999999999
Q ss_pred CcCCCCCHHHHHHHHH
Q 014484 228 EARERPNAKSLVISLM 243 (423)
Q Consensus 228 dp~~Rps~~~vl~~l~ 243 (423)
||.+||++++++.+..
T Consensus 260 ~p~~Rp~~~~il~~~~ 275 (296)
T cd06618 260 DHRKRPKYRELLQHPF 275 (296)
T ss_pred ChhhCCCHHHHhcChh
Confidence 9999999999998864
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=281.20 Aligned_cols=229 Identities=17% Similarity=0.201 Sum_probs=184.1
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
|+|+.|=.+... +...++|++... .....+|+.++... +||||+.+.+++.++.+.|+|||++.|+-|.+.+..
T Consensus 333 gs~s~~~~~~~~~t~~~~~vkii~~~---~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l~g~ell~ri~~ 409 (612)
T KOG0603|consen 333 GSFSAVKYCESSPTDQEPAVKIISKR---ADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELLDGGELLRRIRS 409 (612)
T ss_pred CCccceeeeeccccccchhheecccc---ccccccccchhhhhcCCCcceeecceecCCceeeeeehhccccHHHHHHHh
Confidence 555555444442 455566666555 23445677666666 899999999999999999999999999988888853
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeee-cCCCCeEEccccccccCCCC-CccccCcccCCcccc
Q 014484 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILF-DKDGNPRLSSFGLMKNSRDG-KSYSTNLAFTPPEYM 156 (423)
Q Consensus 79 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill-~~~~~~kl~Dfg~~~~~~~~-~~~~~t~~y~aPE~~ 156 (423)
...+. ..+..|+.+|+.|+.|||++| ||||||||+|||+ ++.|+++|+|||.++..... .+.+-|..|.|||++
T Consensus 410 --~~~~~-~e~~~w~~~lv~Av~~LH~~g-vvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~~tp~~t~~y~APEvl 485 (612)
T KOG0603|consen 410 --KPEFC-SEASQWAAELVSAVDYLHEQG-VVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSCDTPALTLQYVAPEVL 485 (612)
T ss_pred --cchhH-HHHHHHHHHHHHHHHHHHhcC-eeecCCChhheeecCCCCcEEEEEechhhhCchhhcccchhhcccChhhh
Confidence 22233 677789999999999999999 9999999999999 68999999999999877655 234567889999999
Q ss_pred ccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCCHH
Q 014484 157 RTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAK 236 (423)
Q Consensus 157 ~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ 236 (423)
....|+.++||||||++||+|++|..|+...... ..+......+.++..+|.+.++|+.+||+.||.+||++.
T Consensus 486 ~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-------~ei~~~i~~~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~ 558 (612)
T KOG0603|consen 486 AIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-------IEIHTRIQMPKFSECVSDEAKDLLQQLLQVDPALRLGAD 558 (612)
T ss_pred ccCCCCcchhhHHHHHHHHHHHhCCCccccCCch-------HHHHHhhcCCccccccCHHHHHHHHHhccCChhhCcChh
Confidence 9889999999999999999999999998765322 222223334445577889999999999999999999999
Q ss_pred HHHHHHHh
Q 014484 237 SLVISLMS 244 (423)
Q Consensus 237 ~vl~~l~~ 244 (423)
+++.|-+.
T Consensus 559 ~i~~h~w~ 566 (612)
T KOG0603|consen 559 EIGAHPWF 566 (612)
T ss_pred hhccCcch
Confidence 99988665
|
|
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-35 Score=275.99 Aligned_cols=237 Identities=16% Similarity=0.191 Sum_probs=184.1
Q ss_pred CCCCccceeeee--cceeeeeecCCC---hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCC-----ceeEEEecCCCCC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEAD-----ERLLVAEFMPNET 71 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-----~~~lv~e~~~~~~ 71 (423)
|+||.||.+... +..+++|.+... ......+.+|+.+++.++|+||+++++++.... ..++||||+. ++
T Consensus 16 G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~-~~ 94 (337)
T cd07858 16 GAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVYIVYELMD-TD 94 (337)
T ss_pred CCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEEEEEeCCC-CC
Confidence 899999999874 566777766542 223456778999999999999999999887543 4799999996 58
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccC
Q 014484 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTN 147 (423)
Q Consensus 72 L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t 147 (423)
|.+++.. .+.+++..+..++.|++.||.|||+++ ++||||||+||+++.++.++|+|||+++..... ....++
T Consensus 95 L~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~-i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~ 171 (337)
T cd07858 95 LHQIIRS--SQTLSDDHCQYFLYQLLRGLKYIHSAN-VLHRDLKPSNLLLNANCDLKICDFGLARTTSEKGDFMTEYVVT 171 (337)
T ss_pred HHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEcCCCCEEECcCccccccCCCcccccccccc
Confidence 9988853 457999999999999999999999999 999999999999999999999999998866543 234578
Q ss_pred cccCCcccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhh-------------------hchhh---hhcccc
Q 014484 148 LAFTPPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIR-------------------SKNFL---LLMDSA 204 (423)
Q Consensus 148 ~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~-------------------~~~~~---~~~~~~ 204 (423)
..|+|||.+.. ..++.++|||||||++|+|++|..||......... ..... ......
T Consensus 172 ~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (337)
T cd07858 172 RWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYT 251 (337)
T ss_pred cCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcc
Confidence 89999998764 46899999999999999999999888643111000 00000 000000
Q ss_pred cc---CCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHH
Q 014484 205 LE---GHFSNDEGTELVRLASRCLQSEARERPNAKSLVISL 242 (423)
Q Consensus 205 ~~---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l 242 (423)
.. ....+.+++++.++|.+||+.||++|||+++++.|-
T Consensus 252 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~ 292 (337)
T cd07858 252 PRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHP 292 (337)
T ss_pred cccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCc
Confidence 00 011224577899999999999999999999999883
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=274.84 Aligned_cols=238 Identities=17% Similarity=0.163 Sum_probs=184.2
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhH---------------HHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEE
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGE---------------TLNLEEAKAVGNLRSERLANLIGCCYEADERLLVA 64 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~---------------~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 64 (423)
|+||.||++.+. +..+++|.+....... ..+.+|++++..++|+||+++++++..++..++||
T Consensus 20 G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 99 (335)
T PTZ00024 20 GTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEGDFINLVM 99 (335)
T ss_pred CCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecCCcEEEEE
Confidence 899999999864 6667777664432211 24678999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC---
Q 014484 65 EFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--- 141 (423)
Q Consensus 65 e~~~~~~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--- 141 (423)
||+.| +|.+++.. ...+++..+..++.|++.||.|||+++ ++||||+|+||+++.++.++|+|||++......
T Consensus 100 e~~~~-~l~~~l~~--~~~~~~~~~~~~~~ql~~aL~~LH~~~-i~H~dl~~~nill~~~~~~kl~dfg~~~~~~~~~~~ 175 (335)
T PTZ00024 100 DIMAS-DLKKVVDR--KIRLTESQVKCILLQILNGLNVLHKWY-FMHRDLSPANIFINSKGICKIADFGLARRYGYPPYS 175 (335)
T ss_pred ecccc-CHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecccccHHHeEECCCCCEEECCccceeeccccccc
Confidence 99975 99998853 456899999999999999999999999 999999999999999999999999998755410
Q ss_pred ---------------CccccCcccCCccccccCC-CCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccc
Q 014484 142 ---------------KSYSTNLAFTPPEYMRTGR-VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSAL 205 (423)
Q Consensus 142 ---------------~~~~~t~~y~aPE~~~~~~-~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (423)
....++..|+|||.+.+.. ++.++|+|||||++|+|++|.+||.......... .+........
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~-~i~~~~~~~~ 254 (335)
T PTZ00024 176 DTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLG-RIFELLGTPN 254 (335)
T ss_pred ccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHHHhCCCc
Confidence 1223577899999987644 7899999999999999999998886542211100 0000000000
Q ss_pred --------------------cC---CCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHh
Q 014484 206 --------------------EG---HFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMS 244 (423)
Q Consensus 206 --------------------~~---~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~ 244 (423)
.. ......+.++.++|.+||+.||++|||+++++.|.+-
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~ 316 (335)
T PTZ00024 255 EDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYF 316 (335)
T ss_pred hhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCccc
Confidence 00 0012236779999999999999999999999987544
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-34 Score=307.78 Aligned_cols=237 Identities=22% Similarity=0.377 Sum_probs=187.4
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW 79 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~ 79 (423)
|+||.||++.+. +..+++|.+..... ....|++.+++++|||||+++++|.+.+..++||||+++|+|.+++.
T Consensus 701 G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~-- 775 (968)
T PLN00113 701 GKKGASYKGKSIKNGMQFVVKEINDVNS---IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLR-- 775 (968)
T ss_pred CCCeeEEEEEECCCCcEEEEEEccCCcc---ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHh--
Confidence 899999999863 67788887754432 22356899999999999999999999999999999999999999994
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHH---cCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCCccccCcccCCcccc
Q 014484 80 ETQPMKWAMRLRVALYLAQALEYCS---SKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYM 156 (423)
Q Consensus 80 ~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~t~~y~aPE~~ 156 (423)
.+++..+.+++.|++.||.||| +.+ |+||||||+||+++.++..++. ||............+|..|+|||++
T Consensus 776 ---~l~~~~~~~i~~~ia~~L~yLH~~~~~~-iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~~~~~~t~~y~aPE~~ 850 (968)
T PLN00113 776 ---NLSWERRRKIAIGIAKALRFLHCRCSPA-VVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTDTKCFISSAYVAPETR 850 (968)
T ss_pred ---cCCHHHHHHHHHHHHHHHHHhccCCCCC-eecCCCCHHhEEECCCCceEEE-eccccccccCCCccccccccCcccc
Confidence 3899999999999999999999 557 9999999999999998887765 6655444444445788999999999
Q ss_pred ccCCCCCCcceehhHHHHHHHhhCCCCCCchhhH-----H-----hhhchhhhhccccccC--CCChhHHHHHHHHHHHh
Q 014484 157 RTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALD-----L-----IRSKNFLLLMDSALEG--HFSNDEGTELVRLASRC 224 (423)
Q Consensus 157 ~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~-----~-----~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~c 224 (423)
.+..++.++|||||||++|||+||+.|+...... . ..........++.... ..+.....++.+++.+|
T Consensus 851 ~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C 930 (968)
T PLN00113 851 ETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHC 930 (968)
T ss_pred cCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhh
Confidence 9889999999999999999999999887432100 0 0001111122222222 12334456788999999
Q ss_pred cccCcCCCCCHHHHHHHHHhhhhh
Q 014484 225 LQSEARERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 225 l~~dp~~Rps~~~vl~~l~~~~~~ 248 (423)
|+.||++|||++++++.|+.+.+.
T Consensus 931 l~~~P~~RPt~~evl~~L~~~~~~ 954 (968)
T PLN00113 931 TATDPTARPCANDVLKTLESASRS 954 (968)
T ss_pred CcCCchhCcCHHHHHHHHHHhhcc
Confidence 999999999999999999887654
|
|
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=274.73 Aligned_cols=237 Identities=18% Similarity=0.214 Sum_probs=188.1
Q ss_pred CCCCccceeeee--cceeeeeecCCCh---hhHHHHHHHHHHHhcCCCCCccceEeEEEeCC-----ceeEEEecCCCCC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEAD-----ERLLVAEFMPNET 71 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-----~~~lv~e~~~~~~ 71 (423)
|++|.||++.+. +..+++|.+.... ...+.+.+|+.+++.++|+||+++.+++...+ ..|+||||+.+ +
T Consensus 11 g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~ 89 (330)
T cd07834 11 GAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYIVTELMET-D 89 (330)
T ss_pred CCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEEEecchhh-h
Confidence 899999999975 5677777765533 24567889999999999999999999998875 68999999975 8
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC-------cc
Q 014484 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-------SY 144 (423)
Q Consensus 72 L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-------~~ 144 (423)
|.+++.+ ...+++..+..++.|++.||.+||++| ++||||||+||+++.++.++|+|||++....... ..
T Consensus 90 l~~~l~~--~~~l~~~~~~~i~~~l~~~l~~LH~~g-i~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~ 166 (330)
T cd07834 90 LHKVIKS--PQPLTDDHIQYFLYQILRGLKYLHSAN-VIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEY 166 (330)
T ss_pred HHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEcccCceEeeccccccccccccc
Confidence 9998854 347999999999999999999999999 9999999999999999999999999988665432 23
Q ss_pred ccCcccCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhh-------------------hhcc--
Q 014484 145 STNLAFTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFL-------------------LLMD-- 202 (423)
Q Consensus 145 ~~t~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~-------------------~~~~-- 202 (423)
.++..|+|||.+.+. .++.++|+||||+++++|++|..||.............. ..+.
T Consensus 167 ~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (330)
T cd07834 167 VVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSL 246 (330)
T ss_pred ccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhc
Confidence 568889999999887 789999999999999999999988865422111000000 0000
Q ss_pred -cc---ccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHH
Q 014484 203 -SA---LEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISL 242 (423)
Q Consensus 203 -~~---~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l 242 (423)
.. .........+.++.++|.+||++||.+|||+++++.+.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~ 290 (330)
T cd07834 247 PKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHP 290 (330)
T ss_pred ccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCc
Confidence 00 00001123467899999999999999999999999874
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-35 Score=257.79 Aligned_cols=230 Identities=19% Similarity=0.228 Sum_probs=193.0
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|.||.|..+.-. +.-+++|++.+.- ......+.|-++|+..+||.+..+--.|...+.+|+||||..||.|.-+
T Consensus 179 GTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVMeyanGGeLf~H 258 (516)
T KOG0690|consen 179 GTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVMEYANGGELFFH 258 (516)
T ss_pred CccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEEEEccCceEeee
Confidence 778888777654 5567777765533 3344567899999999999999999999999999999999999999998
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCC----CCCccccCcccC
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSR----DGKSYSTNLAFT 151 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~----~~~~~~~t~~y~ 151 (423)
+.+ .+.++++...-+..+|+.||.|||+++ ||.||||.+|+|+|++|++||+|||+++..- ...+++||+.|.
T Consensus 259 Lsr--er~FsE~RtRFYGaEIvsAL~YLHs~~-ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g~t~kTFCGTPEYL 335 (516)
T KOG0690|consen 259 LSR--ERVFSEDRTRFYGAEIVSALGYLHSRN-IVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYGDTTKTFCGTPEYL 335 (516)
T ss_pred hhh--hhcccchhhhhhhHHHHHHhhhhhhCC-eeeeechhhhheeccCCceEeeecccchhcccccceeccccCChhhc
Confidence 864 567999999999999999999999999 9999999999999999999999999998533 346789999999
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhc-cccccCCCChhHHHHHHHHHHHhcccCcC
Q 014484 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLM-DSALEGHFSNDEGTELVRLASRCLQSEAR 230 (423)
Q Consensus 152 aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (423)
|||++.+..|+...|+|.+|+++|||++|+.||...- ...+..++ ... -.+|..++++...++..+|.+||.
T Consensus 336 APEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~d-----h~kLFeLIl~ed--~kFPr~ls~eAktLLsGLL~kdP~ 408 (516)
T KOG0690|consen 336 APEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKD-----HEKLFELILMED--LKFPRTLSPEAKTLLSGLLKKDPK 408 (516)
T ss_pred CchhhccccccceeehhhhhHHHHHHHhccCcccccc-----hhHHHHHHHhhh--ccCCccCCHHHHHHHHHHhhcChH
Confidence 9999999999999999999999999999999987642 22222222 111 247788899999999999999999
Q ss_pred CCC-----CHHHHHHH
Q 014484 231 ERP-----NAKSLVIS 241 (423)
Q Consensus 231 ~Rp-----s~~~vl~~ 241 (423)
+|. .+.||.+|
T Consensus 409 kRLGgGpdDakEi~~h 424 (516)
T KOG0690|consen 409 KRLGGGPDDAKEIMRH 424 (516)
T ss_pred hhcCCCchhHHHHHhh
Confidence 993 56777766
|
|
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-34 Score=271.88 Aligned_cols=236 Identities=17% Similarity=0.195 Sum_probs=181.4
Q ss_pred CCCCccceeeee--cceeeeeecCCC---hhhHHHHHHHHHHHhcC-CCCCccceEeEEEeCC--ceeEEEecCCCCCHH
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS---DLGETLNLEEAKAVGNL-RSERLANLIGCCYEAD--ERLLVAEFMPNETLA 73 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~--~~~lv~e~~~~~~L~ 73 (423)
|+||.||++.+. +..+++|.+... ......+.+|+.++.++ +||||++++++|...+ ..++||||+.+ +|.
T Consensus 18 g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~lv~e~~~~-~L~ 96 (337)
T cd07852 18 GAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYLVFEYMET-DLH 96 (337)
T ss_pred CCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEEEeccccc-CHH
Confidence 899999999874 566777766432 23345677899999999 9999999999986543 57999999975 999
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC---------cc
Q 014484 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK---------SY 144 (423)
Q Consensus 74 ~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---------~~ 144 (423)
.++.. +.+++..+..++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||++....... ..
T Consensus 97 ~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~-i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~ 172 (337)
T cd07852 97 AVIRA---NILEDVHKRYIMYQLLKALKYIHSGN-VIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPVLTDY 172 (337)
T ss_pred HHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCcEEEeeccchhccccccccccCcchhcc
Confidence 98853 27889999999999999999999999 9999999999999999999999999987554321 23
Q ss_pred ccCcccCCcccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhch-------------------hhhhc---
Q 014484 145 STNLAFTPPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKN-------------------FLLLM--- 201 (423)
Q Consensus 145 ~~t~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~-------------------~~~~~--- 201 (423)
.++..|+|||.+.+ ..++.++|+||||+++|+|++|..||............ .....
T Consensus 173 ~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (337)
T cd07852 173 VATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSL 252 (337)
T ss_pred cccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhc
Confidence 46888999998765 45788999999999999999999887643211100000 00000
Q ss_pred ccc---ccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHH
Q 014484 202 DSA---LEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISL 242 (423)
Q Consensus 202 ~~~---~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l 242 (423)
... ......+..+.++.++|.+||+.||++|||+.+++.+-
T Consensus 253 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~ 296 (337)
T cd07852 253 PSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHP 296 (337)
T ss_pred ccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhCh
Confidence 000 00011122567899999999999999999999999873
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-35 Score=275.74 Aligned_cols=240 Identities=15% Similarity=0.193 Sum_probs=185.1
Q ss_pred CCCCccceeeee--cceeeeeecCCCh---hhHHHHHHHHHHHhcCCCCCccceEeEEEe----CCceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYE----ADERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~~lv~e~~~~~~L 72 (423)
|+||.||.+... +..+++|++.... .....+.+|+.+++.++||||+++++++.. ....++||||+. ++|
T Consensus 16 g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~-~~l 94 (334)
T cd07855 16 GAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYVVMDLME-SDL 94 (334)
T ss_pred CCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEEEEehhh-hhH
Confidence 889999999874 6777777765432 234567889999999999999999998864 345799999996 589
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC--------Ccc
Q 014484 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--------KSY 144 (423)
Q Consensus 73 ~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--------~~~ 144 (423)
.+++.. ...+++..+..++.|++.||.|||+++ ++||||||+||+++.++.++|+|||++...... ...
T Consensus 95 ~~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~ 171 (334)
T cd07855 95 HHIIHS--DQPLTEEHIRYFLYQLLRGLKYIHSAN-VIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEY 171 (334)
T ss_pred HHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCcEEecccccceeecccCcCCCcccccc
Confidence 998853 456999999999999999999999999 999999999999999999999999998754322 123
Q ss_pred ccCcccCCcccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhh-------------------hchhhhhccc-
Q 014484 145 STNLAFTPPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIR-------------------SKNFLLLMDS- 203 (423)
Q Consensus 145 ~~t~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~-------------------~~~~~~~~~~- 203 (423)
.++..|+|||.+.+ ..++.++|||||||++|+|++|..||......... ..........
T Consensus 172 ~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 251 (334)
T cd07855 172 VATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNL 251 (334)
T ss_pred cccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhc
Confidence 57889999998765 45889999999999999999999988653211000 0000000000
Q ss_pred cccCC-----CChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhh
Q 014484 204 ALEGH-----FSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 245 (423)
Q Consensus 204 ~~~~~-----~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~ 245 (423)
..... .....+.++.++|.+||+.||.+|||+++++.+.+--
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~ 298 (334)
T cd07855 252 PRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLA 298 (334)
T ss_pred ccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhh
Confidence 00000 1123467899999999999999999999999886543
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-34 Score=269.28 Aligned_cols=236 Identities=21% Similarity=0.217 Sum_probs=177.9
Q ss_pred CCCCccceeeee--cceeeeeecCCCh---hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCc--------eeEEEecCC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADE--------RLLVAEFMP 68 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~--------~~lv~e~~~ 68 (423)
|+||.||.+... +..+++|.+.... .....+.+|+++++.++||||+++++++..... .++||||+.
T Consensus 23 g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~ 102 (310)
T cd07865 23 GTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYKGSFYLVFEFCE 102 (310)
T ss_pred CCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCCceEEEEEcCCC
Confidence 899999999874 5667777654322 123356789999999999999999999876543 499999996
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC------
Q 014484 69 NETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK------ 142 (423)
Q Consensus 69 ~~~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~------ 142 (423)
+ +|.+.+.. ....+++.++..++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||++.......
T Consensus 103 ~-~l~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 179 (310)
T cd07865 103 H-DLAGLLSN-KNVKFTLSEIKKVMKMLLNGLYYIHRNK-ILHRDMKAANILITKDGILKLADFGLARAFSLSKNSKPNR 179 (310)
T ss_pred c-CHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEECCCCcEEECcCCCcccccCCcccCCCC
Confidence 5 88887753 3346899999999999999999999999 9999999999999999999999999987554321
Q ss_pred --ccccCcccCCccccccCC-CCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhcc---cc------------
Q 014484 143 --SYSTNLAFTPPEYMRTGR-VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD---SA------------ 204 (423)
Q Consensus 143 --~~~~t~~y~aPE~~~~~~-~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~---~~------------ 204 (423)
...++..|+|||.+.+.. ++.++||||||+++|+|++|..|+......... ..+..... +.
T Consensus 180 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (310)
T cd07865 180 YTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQL-TLISQLCGSITPEVWPGVDKLELFK 258 (310)
T ss_pred ccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHHHhCCCChhhcccccchhhhh
Confidence 234578899999886543 788999999999999999999877543211000 00000000 00
Q ss_pred ---ccCC----C-----ChhHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014484 205 ---LEGH----F-----SNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (423)
Q Consensus 205 ---~~~~----~-----~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~ 241 (423)
.... . +...+..+.++|.+||..||.+|||++++++|
T Consensus 259 ~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h 307 (310)
T cd07865 259 KMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH 307 (310)
T ss_pred hccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence 0000 0 00123567899999999999999999999976
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-35 Score=255.88 Aligned_cols=238 Identities=18% Similarity=0.181 Sum_probs=188.8
Q ss_pred CCCCccceeee--ecceeeeeecCCCh-hhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCCCHHhhhc
Q 014484 2 GGRCSKFSICW--FHCHLKSSVLESSD-LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (423)
Q Consensus 2 G~~g~v~~~~~--~~~~~~~~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~ 77 (423)
|+++.|--++. .+..+++|++++.. +.+.+.++|++++.++ .|+||++++++|+++..+|+|||-+.||+|-.+|.
T Consensus 89 GAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGplLshI~ 168 (463)
T KOG0607|consen 89 GAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPLLSHIQ 168 (463)
T ss_pred ccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchHHHHHH
Confidence 66676665555 37888998887654 5588899999999999 69999999999999999999999999999999996
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCC---CeEEccccccccCCCC-----------Cc
Q 014484 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG---NPRLSSFGLMKNSRDG-----------KS 143 (423)
Q Consensus 78 ~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~---~~kl~Dfg~~~~~~~~-----------~~ 143 (423)
+ ...|++.++.++.++|+.||.|||.+| |.|||+||+|||-.+.. -+|||||.+....... .+
T Consensus 169 ~--~~~F~E~EAs~vvkdia~aLdFlH~kg-IAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~t 245 (463)
T KOG0607|consen 169 K--RKHFNEREASRVVKDIASALDFLHTKG-IAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLT 245 (463)
T ss_pred H--hhhccHHHHHHHHHHHHHHHHHHhhcC-cccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCCccccC
Confidence 4 567999999999999999999999999 99999999999996654 3799999876432211 23
Q ss_pred cccCcccCCccccc---cC--CCCCCcceehhHHHHHHHhhCCCCCCchhhH----------HhhhchhhhhccccccCC
Q 014484 144 YSTNLAFTPPEYMR---TG--RVTPESVVYSFGTMLLDLLSGKHIPPSHALD----------LIRSKNFLLLMDSALEGH 208 (423)
Q Consensus 144 ~~~t~~y~aPE~~~---~~--~~~~~~Di~slG~~l~el~~g~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~ 208 (423)
.+|+..|||||+.. ++ .|+.++|.||||||+|-|++|.+||.+.--. ..-.+.+...+.... -+
T Consensus 246 PvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGk-Ye 324 (463)
T KOG0607|consen 246 PVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGK-YE 324 (463)
T ss_pred cccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccC-Cc
Confidence 45777899999653 32 4899999999999999999999999764111 011122222222221 23
Q ss_pred CCh----hHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 209 FSN----DEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 209 ~~~----~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
+|. .++.+..++|+.+|..|+.+|-++..+++|.+
T Consensus 325 FPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw 363 (463)
T KOG0607|consen 325 FPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPW 363 (463)
T ss_pred CChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCcc
Confidence 333 46889999999999999999999999988754
|
|
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-35 Score=272.22 Aligned_cols=237 Identities=16% Similarity=0.145 Sum_probs=197.6
Q ss_pred CCCCccceeeee--cceeeeeecCCCh---hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
|-||.||.+..+ |++|++|++++-. ...+.+..|+.+|+++.||.||.+.-.|+..+..++|||-+.| +.-+.|
T Consensus 575 GQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~G-DMLEMI 653 (888)
T KOG4236|consen 575 GQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHG-DMLEMI 653 (888)
T ss_pred CcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcc-hHHHHH
Confidence 779999999875 8999999886633 3457788999999999999999999999999999999999966 666666
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCC---CeEEccccccccCCCC---CccccCccc
Q 014484 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG---NPRLSSFGLMKNSRDG---KSYSTNLAF 150 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~---~~kl~Dfg~~~~~~~~---~~~~~t~~y 150 (423)
...+.+++++....-++.||+.||+|||.++ |+|+||||+|||+.+.. .+||||||+++.+... .+..||+.|
T Consensus 654 LSsEkgRL~er~TkFlvtQIL~ALr~LH~kn-IvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRrsVVGTPAY 732 (888)
T KOG4236|consen 654 LSSEKGRLPERITKFLVTQILVALRYLHFKN-IVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRRSVVGTPAY 732 (888)
T ss_pred HHhhcccchHHHHHHHHHHHHHHHHHhhhcc-eeeccCCchheeeccCCCCCceeeccccceeecchhhhhhhhcCCccc
Confidence 6667889999999999999999999999999 99999999999996543 5899999999988765 567899999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcC
Q 014484 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (423)
Q Consensus 151 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (423)
.|||+++...|+..-|+||+|+++|--++|..||.... .+. +..+...-......-.+++++.+++|..+|+..=.
T Consensus 733 LaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdE--dIn--dQIQNAaFMyPp~PW~eis~~AidlIn~LLqVkm~ 808 (888)
T KOG4236|consen 733 LAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDE--DIN--DQIQNAAFMYPPNPWSEISPEAIDLINNLLQVKMR 808 (888)
T ss_pred cCHHHHhhccccccccceeeeEEEEEEecccccCCCcc--chh--HHhhccccccCCCchhhcCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998776531 111 11111111222223345678899999999999999
Q ss_pred CCCCHHHHHHHHHh
Q 014484 231 ERPNAKSLVISLMS 244 (423)
Q Consensus 231 ~Rps~~~vl~~l~~ 244 (423)
+|-|++..+.|.+-
T Consensus 809 kRysvdk~lsh~Wl 822 (888)
T KOG4236|consen 809 KRYSVDKSLSHPWL 822 (888)
T ss_pred HhcchHhhccchhh
Confidence 99999999988643
|
|
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-34 Score=273.94 Aligned_cols=234 Identities=16% Similarity=0.205 Sum_probs=181.2
Q ss_pred CCCCccceeeee--cceeeeeecCCCh---hhHHHHHHHHHHHhcCCCCCccceEeEEEeCC------ceeEEEecCCCC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEAD------ERLLVAEFMPNE 70 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------~~~lv~e~~~~~ 70 (423)
|+||.||.+.+. +..+++|.+.... .....+.+|+.++..++||||+++++++.... ..++||||+.+
T Consensus 26 g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~- 104 (342)
T cd07879 26 GAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQDFYLVMPYMQT- 104 (342)
T ss_pred cCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCceEEEEeccccc-
Confidence 899999999874 6778888765432 22456789999999999999999999987653 35899999965
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-CccccCcc
Q 014484 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSYSTNLA 149 (423)
Q Consensus 71 ~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~~t~~ 149 (423)
+|..++ +..+++..+..++.|++.||.|||+++ ++||||||+||+++.++.++|+|||+++..... ....++..
T Consensus 105 ~l~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~-i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~~~~~~~~~~ 179 (342)
T cd07879 105 DLQKIM----GHPLSEDKVQYLVYQMLCGLKYIHSAG-IIHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRW 179 (342)
T ss_pred CHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEeeCCCCcCCCCCCCCceeeec
Confidence 887765 346899999999999999999999999 999999999999999999999999998765433 23456888
Q ss_pred cCCcccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhch----------------------hhhhcccccc
Q 014484 150 FTPPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKN----------------------FLLLMDSALE 206 (423)
Q Consensus 150 y~aPE~~~~-~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~ 206 (423)
|+|||.+.+ ..++.++|||||||++|||++|..||............ ..........
T Consensus 180 y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (342)
T cd07879 180 YRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPR 259 (342)
T ss_pred ccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCccc
Confidence 999998876 45889999999999999999999988653211100000 0000000000
Q ss_pred CCC---ChhHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014484 207 GHF---SNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (423)
Q Consensus 207 ~~~---~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~ 241 (423)
..+ .+..+.++.++|.+||+.||.+||++++++.|
T Consensus 260 ~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h 297 (342)
T cd07879 260 KDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEH 297 (342)
T ss_pred chHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000 11245678999999999999999999999987
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-34 Score=270.50 Aligned_cols=236 Identities=19% Similarity=0.252 Sum_probs=182.6
Q ss_pred CCCCccceeeee--cceeeeeecCCC---hhhHHHHHHHHHHHhcCCCCCccceEeEEEe-CCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYE-ADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.+. +..+++|.+... ......+.+|++++..++||||+++.++|.. +...++||||+ +++|.++
T Consensus 21 g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv~e~~-~~~L~~~ 99 (328)
T cd07856 21 GAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFVTELL-GTDLHRL 99 (328)
T ss_pred cCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEEEeehh-ccCHHHH
Confidence 889999999864 566777765432 2234567899999999999999999999876 45688999999 5699988
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-CccccCcccCCcc
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSYSTNLAFTPPE 154 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~~t~~y~aPE 154 (423)
+. ...+++..+..++.|++.||.|||+++ ++||||+|+||+++.++.++|+|||++...... ....++..|+|||
T Consensus 100 ~~---~~~~~~~~~~~~~~ql~~aL~~LH~~~-iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~y~aPE 175 (328)
T cd07856 100 LT---SRPLEKQFIQYFLYQILRGLKYVHSAG-VVHRDLKPSNILINENCDLKICDFGLARIQDPQMTGYVSTRYYRAPE 175 (328)
T ss_pred Hh---cCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEeECCCCCEEeCccccccccCCCcCCCcccccccCce
Confidence 84 346889999999999999999999999 999999999999999999999999998765443 3345788999999
Q ss_pred cccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhh-------------------chhhhhccc-cccCCCC---
Q 014484 155 YMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRS-------------------KNFLLLMDS-ALEGHFS--- 210 (423)
Q Consensus 155 ~~~~-~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~-------------------~~~~~~~~~-~~~~~~~--- 210 (423)
.+.+ ..++.++|+|||||++|+|++|..||.......... ......... ......+
T Consensus 176 ~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (328)
T cd07856 176 IMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSE 255 (328)
T ss_pred eeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHH
Confidence 8765 568999999999999999999998886532110000 000000000 0000111
Q ss_pred --hhHHHHHHHHHHHhcccCcCCCCCHHHHHHHH
Q 014484 211 --NDEGTELVRLASRCLQSEARERPNAKSLVISL 242 (423)
Q Consensus 211 --~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l 242 (423)
+.++.++.++|.+||+.+|++|||+++++.+-
T Consensus 256 ~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~ 289 (328)
T cd07856 256 KFKNADPSAIDLLEKMLVFDPQKRISAAEALAHP 289 (328)
T ss_pred HcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCC
Confidence 23467899999999999999999999998774
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-35 Score=290.49 Aligned_cols=233 Identities=18% Similarity=0.168 Sum_probs=193.9
Q ss_pred CCCCccceeeee--cceeeeeecCCC----hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS----DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.|...... +..+|.|++.+- ..+...|..|-.+|..-+.+.|++++-.|.+...+|+||||++||+|-.+
T Consensus 86 GaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlVMdY~pGGDlltL 165 (1317)
T KOG0612|consen 86 GAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYLVMDYMPGGDLLTL 165 (1317)
T ss_pred cccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEEEEecccCchHHHH
Confidence 899999988874 566778887662 23455788899999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-----CccccCccc
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYSTNLAF 150 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~~t~~y 150 (423)
+.+- + ++|+..+.-++.+|+.||.-+|+.| +|||||||+|||+|..|++||+|||.+-.+... ...+|||.|
T Consensus 166 lSk~-~-~~pE~~ArFY~aEiVlAldslH~mg-yVHRDiKPDNvLld~~GHikLADFGsClkm~~dG~V~s~~aVGTPDY 242 (1317)
T KOG0612|consen 166 LSKF-D-RLPEDWARFYTAEIVLALDSLHSMG-YVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGTVRSSVAVGTPDY 242 (1317)
T ss_pred Hhhc-C-CChHHHHHHHHHHHHHHHHHHHhcc-ceeccCCcceeEecccCcEeeccchhHHhcCCCCcEEeccccCCCCc
Confidence 9652 3 7999999999999999999999999 999999999999999999999999998776633 345799999
Q ss_pred CCcccccc-----CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCC--hhHHHHHHHHHHH
Q 014484 151 TPPEYMRT-----GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFS--NDEGTELVRLASR 223 (423)
Q Consensus 151 ~aPE~~~~-----~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~ 223 (423)
.+||+++. +.|++.+|+||+||++|||+.|..||.....- ....+++...-.-.+| ..+|++..+||.+
T Consensus 243 ISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslv----eTY~KIm~hk~~l~FP~~~~VSeeakdLI~~ 318 (1317)
T KOG0612|consen 243 ISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLV----ETYGKIMNHKESLSFPDETDVSEEAKDLIEA 318 (1317)
T ss_pred cCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHH----HHHHHHhchhhhcCCCcccccCHHHHHHHHH
Confidence 99999872 45899999999999999999999999876433 2233333332233344 4578999999999
Q ss_pred hcccCcCCCCC---HHHHHHHH
Q 014484 224 CLQSEARERPN---AKSLVISL 242 (423)
Q Consensus 224 cl~~dp~~Rps---~~~vl~~l 242 (423)
.+. +|..|.. ++++..|.
T Consensus 319 ll~-~~e~RLgrngiedik~Hp 339 (1317)
T KOG0612|consen 319 LLC-DREVRLGRNGIEDIKNHP 339 (1317)
T ss_pred Hhc-ChhhhcccccHHHHHhCc
Confidence 875 5777766 99999886
|
|
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=277.77 Aligned_cols=185 Identities=19% Similarity=0.162 Sum_probs=161.8
Q ss_pred CCCCccceeeee--cceeeeeecCC--ChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCC------ceeEEEecCCCCC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLES--SDLGETLNLEEAKAVGNLRSERLANLIGCCYEAD------ERLLVAEFMPNET 71 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------~~~lv~e~~~~~~ 71 (423)
||||.||++... |+.+|+|.+.. .....+...+|+++|++|+|+|||+++++-++.. ...+|||||.|||
T Consensus 24 Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmEyC~gGs 103 (732)
T KOG4250|consen 24 GAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVMEYCSGGS 103 (732)
T ss_pred CccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEEeecCCCc
Confidence 999999999974 88899988865 3345778889999999999999999999887655 4689999999999
Q ss_pred HHhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeee--cCCC--CeEEccccccccCCCCC---c
Q 014484 72 LAKHLFHWE-TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILF--DKDG--NPRLSSFGLMKNSRDGK---S 143 (423)
Q Consensus 72 L~~~i~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill--~~~~--~~kl~Dfg~~~~~~~~~---~ 143 (423)
|...+.+.+ ...+++.+.+.++..++.||.|||++| |+||||||.||++ +.+| .-||+|||.|+...+.+ +
T Consensus 104 L~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~-IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s~~~S 182 (732)
T KOG4250|consen 104 LRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENG-IVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNSLFTS 182 (732)
T ss_pred HHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcC-ceeccCCCCcEEEeecCCCceEEeeecccccccCCCCCeeee
Confidence 999997543 346999999999999999999999999 9999999999999 3334 36999999999888764 5
Q ss_pred cccCcccCCccccc-cCCCCCCcceehhHHHHHHHhhCCCCCCch
Q 014484 144 YSTNLAFTPPEYMR-TGRVTPESVVYSFGTMLLDLLSGKHIPPSH 187 (423)
Q Consensus 144 ~~~t~~y~aPE~~~-~~~~~~~~Di~slG~~l~el~~g~~~~~~~ 187 (423)
..||..|.+||.+- ...|+...|.|||||++|+++||..||-..
T Consensus 183 ~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~ 227 (732)
T KOG4250|consen 183 LVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPF 227 (732)
T ss_pred ecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcC
Confidence 67999999999988 477999999999999999999999998654
|
|
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-34 Score=271.63 Aligned_cols=236 Identities=16% Similarity=0.181 Sum_probs=183.6
Q ss_pred CCCCccceeeee--cceeeeeecCCC---hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCc------eeEEEecCCCC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEADE------RLLVAEFMPNE 70 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~------~~lv~e~~~~~ 70 (423)
|+||.||.+.+. +..+++|.+... ......+.+|+.+++.++||||+++++++..+.. .++||||+ |+
T Consensus 26 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~ 104 (343)
T cd07880 26 GAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDFYLVMPFM-GT 104 (343)
T ss_pred cCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccceEEEEEecC-CC
Confidence 899999999874 666787776432 2234567899999999999999999999976543 48999999 77
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC-ccccCcc
Q 014484 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-SYSTNLA 149 (423)
Q Consensus 71 ~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-~~~~t~~ 149 (423)
+|.+++. ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++....... ...+++.
T Consensus 105 ~l~~~~~---~~~l~~~~~~~i~~qi~~al~~LH~~g-i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 180 (343)
T cd07880 105 DLGKLMK---HEKLSEDRIQFLVYQMLKGLKYIHAAG-IIHRDLKPGNLAVNEDCELKILDFGLARQTDSEMTGYVVTRW 180 (343)
T ss_pred CHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEeecccccccccCccccccCCc
Confidence 9998884 356999999999999999999999999 9999999999999999999999999988665432 3467889
Q ss_pred cCCcccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhch----------hhhh------------ccccc-
Q 014484 150 FTPPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKN----------FLLL------------MDSAL- 205 (423)
Q Consensus 150 y~aPE~~~~-~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~----------~~~~------------~~~~~- 205 (423)
|+|||.+.+ ..++.++|+|||||++|+|++|..||............ +... .....
T Consensus 181 y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (343)
T cd07880 181 YRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRK 260 (343)
T ss_pred ccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCc
Confidence 999998875 35888999999999999999999888643211000000 0000 00000
Q ss_pred --cCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHH
Q 014484 206 --EGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISL 242 (423)
Q Consensus 206 --~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l 242 (423)
.......+++++.++|.+||..||.+|||+.+++.+-
T Consensus 261 ~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~ 299 (343)
T cd07880 261 KDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHP 299 (343)
T ss_pred chHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCc
Confidence 0011123466799999999999999999999999763
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=290.03 Aligned_cols=232 Identities=19% Similarity=0.221 Sum_probs=179.1
Q ss_pred CCCCccceeeee--cceeeeeecCCC--hhhHHHHHHHHHHHhcCCCCCccceEeEEEeC--------------------
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEA-------------------- 57 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-------------------- 57 (423)
||||.||++.+. |+.+|+|.+.-. +......++|+.+|.+|+|||||+++..|.+.
T Consensus 490 GGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ei~~~~~~~~sQs 569 (1351)
T KOG1035|consen 490 GGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLEIVASDSESRSQS 569 (1351)
T ss_pred CCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccccccccchhhhccc
Confidence 999999999984 888998877655 55566789999999999999999998876321
Q ss_pred --------------------------------------------------------------------------------
Q 014484 58 -------------------------------------------------------------------------------- 57 (423)
Q Consensus 58 -------------------------------------------------------------------------------- 57 (423)
T Consensus 570 ~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e~~~~~d~~~ess 649 (1351)
T KOG1035|consen 570 ASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSEGSVILDDTSESS 649 (1351)
T ss_pred CCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccCCccccCcchhhh
Confidence
Q ss_pred ----------C---------ceeEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCC
Q 014484 58 ----------D---------ERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYR 118 (423)
Q Consensus 58 ----------~---------~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~N 118 (423)
. .+||-||||+..+|.+++.++ ...-.....|+++++|+.||.|+|++| +|||||||.|
T Consensus 650 ~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N-~~~~~~d~~wrLFreIlEGLaYIH~~g-iIHRDLKP~N 727 (1351)
T KOG1035|consen 650 ESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRN-HFNSQRDEAWRLFREILEGLAYIHDQG-IIHRDLKPRN 727 (1351)
T ss_pred hhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhc-ccchhhHHHHHHHHHHHHHHHHHHhCc-eeeccCCcce
Confidence 0 147999999997777777532 111147789999999999999999999 9999999999
Q ss_pred eeecCCCCeEEccccccccCC----------------------CCCccccCcccCCccccccCC---CCCCcceehhHHH
Q 014484 119 ILFDKDGNPRLSSFGLMKNSR----------------------DGKSYSTNLAFTPPEYMRTGR---VTPESVVYSFGTM 173 (423)
Q Consensus 119 ill~~~~~~kl~Dfg~~~~~~----------------------~~~~~~~t~~y~aPE~~~~~~---~~~~~Di~slG~~ 173 (423)
|+++.++.+||+|||++.... ..+...||..|+|||.+.+.. |+.|+|+||||+|
T Consensus 728 IFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIV 807 (1351)
T KOG1035|consen 728 IFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIV 807 (1351)
T ss_pred eEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHH
Confidence 999999999999999987521 123456899999999998654 9999999999999
Q ss_pred HHHHhhCCCCCCchhhHHhhhchhhhhccccccCC--CChhHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014484 174 LLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGH--FSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (423)
Q Consensus 174 l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~ 241 (423)
++||+.- |.... .....+..+....+... +..+..+.-..+|++|+++||.+|||+.++|+.
T Consensus 808 lFEM~yP---F~TsM---ERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s 871 (1351)
T KOG1035|consen 808 LFEMLYP---FGTSM---ERASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNS 871 (1351)
T ss_pred HHHHhcc---CCchH---HHHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHHHhhc
Confidence 9999843 44321 11122222222222222 122334556899999999999999999999865
|
|
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-34 Score=263.97 Aligned_cols=237 Identities=19% Similarity=0.199 Sum_probs=186.5
Q ss_pred CCCCccceeeee--cceeeeeecCCC---hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
|++|.||.+... +..+++|.+... ......+..|+.+++.++|+||+++++++...+..++||||+.+ +|.+++
T Consensus 10 g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~~i 88 (282)
T cd07829 10 GTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCDM-DLKKYL 88 (282)
T ss_pred cCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcCc-CHHHHH
Confidence 789999999885 577777777654 22345778899999999999999999999999999999999975 999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC----ccccCcccCC
Q 014484 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK----SYSTNLAFTP 152 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~----~~~~t~~y~a 152 (423)
.+. ...+++..+..++.|++.||.+||+++ ++||||+|+||++++++.++|+|||+++...... ...++..|+|
T Consensus 89 ~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~a 166 (282)
T cd07829 89 DKR-PGPLSPNLIKSIMYQLLRGLAYCHSHR-ILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHEVVTLWYRA 166 (282)
T ss_pred Hhh-ccCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChheEEEcCCCCEEEecCCcccccCCCccccCccccCcCcCC
Confidence 642 246999999999999999999999999 9999999999999999999999999987654432 2345678999
Q ss_pred ccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhch-----------h---------hhhccccccC---C
Q 014484 153 PEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKN-----------F---------LLLMDSALEG---H 208 (423)
Q Consensus 153 PE~~~~~-~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~-----------~---------~~~~~~~~~~---~ 208 (423)
||.+.+. .++.++|+|||||++++|++|..||............ + .......... .
T Consensus 167 PE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (282)
T cd07829 167 PEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEK 246 (282)
T ss_pred hHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHH
Confidence 9998766 7899999999999999999998887654211110000 0 0000000000 0
Q ss_pred CChhHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014484 209 FSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (423)
Q Consensus 209 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~ 241 (423)
..+..+..+.+++.+||+.||++||++.+++.+
T Consensus 247 ~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 279 (282)
T cd07829 247 VLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH 279 (282)
T ss_pred hcccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence 011236789999999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-34 Score=269.89 Aligned_cols=237 Identities=16% Similarity=0.203 Sum_probs=182.4
Q ss_pred CCCCccceeeee--cceeeeeecCCCh---hhHHHHHHHHHHHhcCCCCCccceEeEEEeC------CceeEEEecCCCC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEA------DERLLVAEFMPNE 70 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~~~~lv~e~~~~~ 70 (423)
|+||.||.+... +..+++|.+.... .....+.+|+.++.+++||||+++++++... ...+++++++ |+
T Consensus 28 G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~~~~-~~ 106 (345)
T cd07877 28 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GA 106 (345)
T ss_pred cCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccccccccEEEEehhc-cc
Confidence 899999999863 6677778775432 2345678899999999999999999998654 2367888887 77
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC-ccccCcc
Q 014484 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-SYSTNLA 149 (423)
Q Consensus 71 ~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-~~~~t~~ 149 (423)
+|.+++. ...+++..+..++.|++.||.|||+++ ++||||||+||+++.++.++|+|||+++...... ...++..
T Consensus 107 ~L~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 182 (345)
T cd07877 107 DLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRW 182 (345)
T ss_pred CHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCChHHEEEcCCCCEEEecccccccccccccccccCCC
Confidence 9998874 346899999999999999999999999 9999999999999999999999999988665442 3467889
Q ss_pred cCCcccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhch----------------------hhhhcccccc
Q 014484 150 FTPPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKN----------------------FLLLMDSALE 206 (423)
Q Consensus 150 y~aPE~~~~-~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~ 206 (423)
|+|||.+.+ ..++.++|||||||++|+|++|..||............ ..........
T Consensus 183 y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (345)
T cd07877 183 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 262 (345)
T ss_pred ccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCC
Confidence 999998865 46889999999999999999999888643211100000 0000000000
Q ss_pred CCC---ChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 207 GHF---SNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 207 ~~~---~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
..+ ....++++.++|.+||+.||.+|||+.+++.|-.
T Consensus 263 ~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~ 302 (345)
T cd07877 263 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 302 (345)
T ss_pred cchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChh
Confidence 000 1123667999999999999999999999998853
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-35 Score=254.65 Aligned_cols=241 Identities=13% Similarity=0.175 Sum_probs=184.4
Q ss_pred CCCCccceeeee------cceeeeeecCCChhh---HHHHHHHHHHHhcCCCCCccceEeEEEe-CCceeEEEecCCCCC
Q 014484 2 GGRCSKFSICWF------HCHLKSSVLESSDLG---ETLNLEEAKAVGNLRSERLANLIGCCYE-ADERLLVAEFMPNET 71 (423)
Q Consensus 2 G~~g~v~~~~~~------~~~~~~~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~~~~~~ 71 (423)
|.||.||+++.. ...+++|.+..++.. .....+|+.+++.++||||+.+..+|.. +..+++++||.+. +
T Consensus 35 GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~l~fdYAEh-D 113 (438)
T KOG0666|consen 35 GTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVWLLFDYAEH-D 113 (438)
T ss_pred cccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEEEEehhhhh-h
Confidence 789999999763 224666666555321 3456799999999999999999999988 7789999999987 9
Q ss_pred HHhhhccC---CCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCC----CCeEEccccccccCCCC---
Q 014484 72 LAKHLFHW---ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKD----GNPRLSSFGLMKNSRDG--- 141 (423)
Q Consensus 72 L~~~i~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~----~~~kl~Dfg~~~~~~~~--- 141 (423)
|...|+.. ..+.++...+..|+.||+.|+.|||++- |+||||||+|||+..+ |.+||+|||+++.....
T Consensus 114 L~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NW-vlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkp 192 (438)
T KOG0666|consen 114 LWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNW-VLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKP 192 (438)
T ss_pred HHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhh-eeeccCCcceEEEeccCCccCeeEeecccHHHHhhccccc
Confidence 99888632 3457999999999999999999999999 9999999999999776 89999999999977643
Q ss_pred ----CccccCcccCCccccccCC-CCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhc--------hhhhhccccccC-
Q 014484 142 ----KSYSTNLAFTPPEYMRTGR-VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSK--------NFLLLMDSALEG- 207 (423)
Q Consensus 142 ----~~~~~t~~y~aPE~~~~~~-~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~--------~~~~~~~~~~~~- 207 (423)
...+.|+.|.|||.+.|.. |+.+.|||++|||+.||+|..+.|.+......... .+..++...-..
T Consensus 193 l~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~ 272 (438)
T KOG0666|consen 193 LASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKD 272 (438)
T ss_pred cccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCcccc
Confidence 2345689999999998876 99999999999999999999987765422111110 000011000000
Q ss_pred --------------------C-CChh----------HHHHHHHHHHHhcccCcCCCCCHHHHHHHHHh
Q 014484 208 --------------------H-FSND----------EGTELVRLASRCLQSEARERPNAKSLVISLMS 244 (423)
Q Consensus 208 --------------------~-~~~~----------~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~ 244 (423)
. .+.. -++...+++.+||+.||..|.|+++.++|.--
T Consensus 273 Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF 340 (438)
T KOG0666|consen 273 WPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYF 340 (438)
T ss_pred chhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhccccc
Confidence 0 0000 02347899999999999999999999988543
|
|
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-34 Score=261.82 Aligned_cols=242 Identities=17% Similarity=0.202 Sum_probs=187.9
Q ss_pred CCCCccceeeeecceeeeeecCCChhhHHHHHHHHHHH--hcCCCCCccceEeEEEeCC----ceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAV--GNLRSERLANLIGCCYEAD----ERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l--~~l~h~niv~~~~~~~~~~----~~~lv~e~~~~~~L~~~ 75 (423)
|.||.||++...++.||+|++.... .+.|..|-++. -.+.|+||++++++-..+. ..+||++|.+.|+|.++
T Consensus 221 Grfg~V~KaqL~~~~VAVKifp~~~--kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~kGsL~dy 298 (534)
T KOG3653|consen 221 GRFGCVWKAQLDNRLVAVKIFPEQE--KQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFHPKGSLCDY 298 (534)
T ss_pred CccceeehhhccCceeEEEecCHHH--HHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeeeccCCcHHHH
Confidence 8999999999999999999987665 44565555554 4558999999999988776 78999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcC--------CCeeeccCCCCCeeecCCCCeEEccccccccCCCCC-----
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSK--------GRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK----- 142 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--------~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~----- 142 (423)
++ ...++|....+++..+++||+|||+. .+|+|||||+.||||..+++..|+|||++.......
T Consensus 299 L~---~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~~~d~ 375 (534)
T KOG3653|consen 299 LK---ANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKPQGDT 375 (534)
T ss_pred HH---hccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecCCCCCcch
Confidence 95 45699999999999999999999974 239999999999999999999999999998766442
Q ss_pred -ccccCcccCCccccccCC-CC-----CCcceehhHHHHHHHhhCCCCCC-------chh------hHHhhhchhhhhcc
Q 014484 143 -SYSTNLAFTPPEYMRTGR-VT-----PESVVYSFGTMLLDLLSGKHIPP-------SHA------LDLIRSKNFLLLMD 202 (423)
Q Consensus 143 -~~~~t~~y~aPE~~~~~~-~~-----~~~Di~slG~~l~el~~g~~~~~-------~~~------~~~~~~~~~~~~~~ 202 (423)
..+||.+|||||++-+.- +. .+.||||+|.|+|||++.-.... .-. ......+-....+.
T Consensus 376 ~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~ 455 (534)
T KOG3653|consen 376 HGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVR 455 (534)
T ss_pred hhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHh
Confidence 367999999999987543 22 26899999999999998543211 000 00000111112223
Q ss_pred ccccCCCChh-----HHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhhh
Q 014484 203 SALEGHFSND-----EGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 203 ~~~~~~~~~~-----~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~~~~ 248 (423)
...++.++.. ...-+++.++.||+.||+.|.|+.-+-+.+..+...
T Consensus 456 kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~ 506 (534)
T KOG3653|consen 456 KKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMML 506 (534)
T ss_pred hccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhcc
Confidence 3333444432 246689999999999999999999999988887755
|
|
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-34 Score=264.94 Aligned_cols=236 Identities=20% Similarity=0.178 Sum_probs=181.0
Q ss_pred CCCCccceeeee--cceeeeeecCCCh---hhHHHHHHHHHHHhcCCCCCccceEeEEEeCC----------ceeEEEec
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEAD----------ERLLVAEF 66 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----------~~~lv~e~ 66 (423)
|+||.||++.+. +..+++|++.... .....+.+|+++++.++||||+++++++.+.. ..++||||
T Consensus 18 g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~e~ 97 (302)
T cd07864 18 GTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEY 97 (302)
T ss_pred cCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhccccCCcEEEEEcc
Confidence 789999999984 5667777764332 23356778999999999999999999997755 68999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC----
Q 014484 67 MPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK---- 142 (423)
Q Consensus 67 ~~~~~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 142 (423)
+++ +|...+.. ....+++..+..++.|++.||.|||+++ ++|+||||+||++++++.++|+|||++.......
T Consensus 98 ~~~-~l~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~ 174 (302)
T cd07864 98 MDH-DLMGLLES-GLVHFSEDHIKSFMKQLLEGLNYCHKKN-FLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESRPY 174 (302)
T ss_pred cCc-cHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCcEEeCcccccccccCCccccc
Confidence 987 77777753 2446899999999999999999999999 9999999999999999999999999987654322
Q ss_pred -ccccCcccCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccc---------------
Q 014484 143 -SYSTNLAFTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSAL--------------- 205 (423)
Q Consensus 143 -~~~~t~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 205 (423)
...++..|+|||.+.+. .++.++|||||||++++|++|.+||...... .....+........
T Consensus 175 ~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (302)
T cd07864 175 TNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQEL-AQLELISRLCGSPCPAVWPDVIKLPYFNT 253 (302)
T ss_pred ccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCChhhcccccccccccc
Confidence 12357789999988653 4788999999999999999999877543111 00000111000000
Q ss_pred ----------cCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014484 206 ----------EGHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (423)
Q Consensus 206 ----------~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~ 241 (423)
........+..+.+++.+||+.||.+|||+.+++.+
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 299 (302)
T cd07864 254 MKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNS 299 (302)
T ss_pred cccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 000111346789999999999999999999999865
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-34 Score=258.62 Aligned_cols=239 Identities=15% Similarity=0.149 Sum_probs=191.1
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHHhcCC-C-CC----ccceEeEEEeCCceeEEEecCCCCCHH
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNLR-S-ER----LANLIGCCYEADERLLVAEFMPNETLA 73 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h-~n----iv~~~~~~~~~~~~~lv~e~~~~~~L~ 73 (423)
|.||.|..+.+. +..+++|++.....-.+...-|+++|.++. + |+ +|++.++|...++.|+|+|.+ |.|+.
T Consensus 100 GtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiCivfell-G~S~~ 178 (415)
T KOG0671|consen 100 GTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHICIVFELL-GLSTF 178 (415)
T ss_pred CcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceEEEEecc-ChhHH
Confidence 778888777765 567888998888878888899999999993 2 33 889999999999999999999 67999
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecC--------------------CCCeEEcccc
Q 014484 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK--------------------DGNPRLSSFG 133 (423)
Q Consensus 74 ~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~--------------------~~~~kl~Dfg 133 (423)
+++.++.-.+++...+..++.|++.++.|||+.+ ++|-||||+|||+.+ +..++|+|||
T Consensus 179 dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~k-l~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFG 257 (415)
T KOG0671|consen 179 DFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLK-LTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFG 257 (415)
T ss_pred HHhccCCccccchHHHHHHHHHHHHHHHHHHhcc-eeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecC
Confidence 9998877889999999999999999999999999 999999999999932 2348999999
Q ss_pred ccccCCCC-CccccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHH--hhhchhhh-----hcccc-
Q 014484 134 LMKNSRDG-KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDL--IRSKNFLL-----LMDSA- 204 (423)
Q Consensus 134 ~~~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~--~~~~~~~~-----~~~~~- 204 (423)
.+...... .+.+.|..|.|||++.+-+++.++||||+||||+|+.||...|+.+.... .-.+.+.. ++...
T Consensus 258 sAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~ 337 (415)
T KOG0671|consen 258 SATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTR 337 (415)
T ss_pred CcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhh
Confidence 99876654 55678999999999999999999999999999999999999887653110 00000000 00000
Q ss_pred ---------c-------cC----------------CCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHH
Q 014484 205 ---------L-------EG----------------HFSNDEGTELVRLASRCLQSEARERPNAKSLVISL 242 (423)
Q Consensus 205 ---------~-------~~----------------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l 242 (423)
+ .+ ........++.+|+++||..||.+|+|+.|++.|-
T Consensus 338 ~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~Hp 407 (415)
T KOG0671|consen 338 KEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSHP 407 (415)
T ss_pred hHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcCH
Confidence 0 00 00112345699999999999999999999999874
|
|
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-34 Score=272.29 Aligned_cols=234 Identities=17% Similarity=0.221 Sum_probs=183.5
Q ss_pred CCCCccceeeee--cceeeeeecCCC---hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCc------eeEEEecCCCC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEADE------RLLVAEFMPNE 70 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~------~~lv~e~~~~~ 70 (423)
|++|.||.+.+. +..+++|++... ......+.+|+.+++.++||||+++.+++...+. .++|+||+ ++
T Consensus 26 g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~ 104 (343)
T cd07851 26 GAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQDVYLVTHLM-GA 104 (343)
T ss_pred CCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccccEEEEEecC-CC
Confidence 789999999884 566777776542 2234567789999999999999999998876654 89999999 66
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-CccccCcc
Q 014484 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSYSTNLA 149 (423)
Q Consensus 71 ~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~~t~~ 149 (423)
+|.+++. ...+++..+..++.|++.||.|||+.| ++||||||+||+++.++.++|+|||++...... ....++..
T Consensus 105 ~L~~~~~---~~~l~~~~~~~~~~ql~~aL~~LH~~g-i~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~ 180 (343)
T cd07851 105 DLNNIVK---CQKLSDDHIQFLVYQILRGLKYIHSAG-IIHRDLKPSNIAVNEDCELKILDFGLARHTDDEMTGYVATRW 180 (343)
T ss_pred CHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCCEEEccccccccccccccCCccccc
Confidence 9999884 356999999999999999999999999 999999999999999999999999998866543 33467889
Q ss_pred cCCcccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhh-----------------------ccccc
Q 014484 150 FTPPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLL-----------------------MDSAL 205 (423)
Q Consensus 150 y~aPE~~~~-~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~ 205 (423)
|+|||.+.+ ..++.++|||||||++|+|++|..||........... .... .....
T Consensus 181 y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (343)
T cd07851 181 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKR-IMNLVGTPDEELLQKISSESARNYIQSLPQMP 259 (343)
T ss_pred ccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHH-HHHhcCCCCHHHHhhccchhHHHHHHhccccC
Confidence 999998865 3678999999999999999999988864321111000 0000 00000
Q ss_pred cCC---CChhHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014484 206 EGH---FSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (423)
Q Consensus 206 ~~~---~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~ 241 (423)
... .....+.++.++|.+||..||.+|||+.+++.|
T Consensus 260 ~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h 298 (343)
T cd07851 260 KKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298 (343)
T ss_pred CCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence 000 011246789999999999999999999999977
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=266.92 Aligned_cols=238 Identities=17% Similarity=0.163 Sum_probs=180.4
Q ss_pred CCCCccceeeeec----ceeeeeecCCC---hhhHHHHHHHHHHHhcC-CCCCccceEeEEEeC----CceeEEEecCCC
Q 014484 2 GGRCSKFSICWFH----CHLKSSVLESS---DLGETLNLEEAKAVGNL-RSERLANLIGCCYEA----DERLLVAEFMPN 69 (423)
Q Consensus 2 G~~g~v~~~~~~~----~~~~~~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~----~~~~lv~e~~~~ 69 (423)
|+||.||.+.+.. ..+++|.+... ......+.+|+.+++.+ +||||+++++++... ...+++|+|+.
T Consensus 11 G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~e~~~- 89 (332)
T cd07857 11 GAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELYLYEELME- 89 (332)
T ss_pred cCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcEEEEEeccc-
Confidence 8899999999863 46777776532 22345678899999999 599999999976543 34688999986
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC--------
Q 014484 70 ETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-------- 141 (423)
Q Consensus 70 ~~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-------- 141 (423)
++|.+++.. ...+++..+..++.||+.||.|||++| ++||||||+||+++.++.++|+|||+++.....
T Consensus 90 ~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g-ivH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 166 (332)
T cd07857 90 ADLHQIIRS--GQPLTDAHFQSFIYQILCGLKYIHSAN-VLHRDLKPGNLLVNADCELKICDFGLARGFSENPGENAGFM 166 (332)
T ss_pred CCHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHeEEcCCCCEEeCcCCCceecccccccccccc
Confidence 599998853 557999999999999999999999999 999999999999999999999999998755432
Q ss_pred CccccCcccCCcccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhh-----------chhhh----------
Q 014484 142 KSYSTNLAFTPPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRS-----------KNFLL---------- 199 (423)
Q Consensus 142 ~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~-----------~~~~~---------- 199 (423)
....++..|+|||.+.+ ..++.++|+||+||++|+|++|.+||.......... .....
T Consensus 167 ~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (332)
T cd07857 167 TEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYI 246 (332)
T ss_pred cCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHH
Confidence 22357889999998765 468999999999999999999998875421100000 00000
Q ss_pred -hccccccC---CCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 200 -LMDSALEG---HFSNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 200 -~~~~~~~~---~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
........ ......+..+.+++.+||+.||.+|||+.+++.+-.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~ 294 (332)
T cd07857 247 RSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPY 294 (332)
T ss_pred HhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChh
Confidence 00000000 011223678999999999999999999999997743
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-34 Score=270.87 Aligned_cols=235 Identities=16% Similarity=0.183 Sum_probs=177.7
Q ss_pred CCCCccceeeee--cceeeeeecCCCh-hhHHHHHHHHHHHhcCCCCCccceEeEEEeC--------------CceeEEE
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEA--------------DERLLVA 64 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--------------~~~~lv~ 64 (423)
|+||.||.+... +..+++|.+.... .....+.+|+++++.++||||+++++++... ...++||
T Consensus 16 g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~ 95 (342)
T cd07854 16 GSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELNSVYIVQ 95 (342)
T ss_pred CCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccccccccceEEEEe
Confidence 899999999874 5566766654433 3356788999999999999999999877654 3478999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecC-CCCeEEccccccccCCCC--
Q 014484 65 EFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK-DGNPRLSSFGLMKNSRDG-- 141 (423)
Q Consensus 65 e~~~~~~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~-~~~~kl~Dfg~~~~~~~~-- 141 (423)
||+.+ +|.+++. ...+++..+..++.||+.||.|||+.| ++||||||+||+++. ++.++|+|||++......
T Consensus 96 e~~~~-~L~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~g-ivH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~ 170 (342)
T cd07854 96 EYMET-DLANVLE---QGPLSEEHARLFMYQLLRGLKYIHSAN-VLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYS 170 (342)
T ss_pred ecccc-cHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEcCCCceEEECCcccceecCCccc
Confidence 99975 9988884 346899999999999999999999999 999999999999974 557899999998755322
Q ss_pred -----CccccCcccCCcccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhch--------------hhhhc
Q 014484 142 -----KSYSTNLAFTPPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKN--------------FLLLM 201 (423)
Q Consensus 142 -----~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~--------------~~~~~ 201 (423)
....++..|+|||.+.+ ..++.++|||||||++|+|++|..||............ .....
T Consensus 171 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (342)
T cd07854 171 HKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVI 250 (342)
T ss_pred cccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhh
Confidence 12346788999997654 45888999999999999999999988643111000000 00000
Q ss_pred ----c-ccccCC-----CChhHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014484 202 ----D-SALEGH-----FSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (423)
Q Consensus 202 ----~-~~~~~~-----~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~ 241 (423)
. ...... .....+.++.+++.+||+.||.+|||+.+++.|
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 300 (342)
T cd07854 251 PSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH 300 (342)
T ss_pred hhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence 0 000000 112345789999999999999999999999977
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-35 Score=268.70 Aligned_cols=237 Identities=16% Similarity=0.209 Sum_probs=201.3
Q ss_pred CCCCCccceeeeecce--eeeeecCCCh----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 1 MGGRCSKFSICWFHCH--LKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 1 ~G~~g~v~~~~~~~~~--~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|||||-|=.....+.. .+.|++.+.+ ...+....|-.+|..+++|.||++|..|.++..+|+.||-|-||.|..
T Consensus 430 vGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEaClGGElWT 509 (732)
T KOG0614|consen 430 VGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEACLGGELWT 509 (732)
T ss_pred cCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHhhcCchhhh
Confidence 7999999888876544 5666664433 235567889999999999999999999999999999999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC---ccccCcccC
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK---SYSTNLAFT 151 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---~~~~t~~y~ 151 (423)
.+++ .+.|+..++.-++.-++.|++|||++| ||+|||||+|++++.+|-+||.|||+++....+. +++||+.|.
T Consensus 510 iLrd--Rg~Fdd~tarF~~acv~EAfeYLH~k~-iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~KTwTFcGTpEYV 586 (732)
T KOG0614|consen 510 ILRD--RGSFDDYTARFYVACVLEAFEYLHRKG-IIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRKTWTFCGTPEYV 586 (732)
T ss_pred hhhh--cCCcccchhhhhHHHHHHHHHHHHhcC-ceeccCChhheeeccCCceEEeehhhHHHhccCCceeeecCCcccc
Confidence 9964 667999999999999999999999999 9999999999999999999999999999888764 478999999
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCC
Q 014484 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARE 231 (423)
Q Consensus 152 aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (423)
|||++....-+.+.|.||||+++|||++|.+||.+. +.+ .....++...-.-.+|..++....++|+++...+|.+
T Consensus 587 APEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~--dpm--ktYn~ILkGid~i~~Pr~I~k~a~~Lik~LCr~~P~E 662 (732)
T KOG0614|consen 587 APEIILNKGHDRAVDYWALGILIYELLTGSPPFSGV--DPM--KTYNLILKGIDKIEFPRRITKTATDLIKKLCRDNPTE 662 (732)
T ss_pred cchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCC--chH--HHHHHHHhhhhhhhcccccchhHHHHHHHHHhcCcHh
Confidence 999999999999999999999999999999998764 111 2222233333334577788889999999999999999
Q ss_pred CC-----CHHHHHHHHHh
Q 014484 232 RP-----NAKSLVISLMS 244 (423)
Q Consensus 232 Rp-----s~~~vl~~l~~ 244 (423)
|. .+.+|.+|-+-
T Consensus 663 RLG~~~~gI~DIkkH~Wf 680 (732)
T KOG0614|consen 663 RLGYQKGGINDIKKHRWF 680 (732)
T ss_pred hhccccCChHHHHhhhhh
Confidence 95 47888888654
|
|
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-34 Score=266.47 Aligned_cols=236 Identities=17% Similarity=0.189 Sum_probs=177.6
Q ss_pred CCCCccceeeee--cceeeeeecCCCh---hhHHHHHHHHHHHhcCCCCCccceEeEEEeCC--------ceeEEEecCC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEAD--------ERLLVAEFMP 68 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--------~~~lv~e~~~ 68 (423)
|+||.||.+.+. +..+++|.+.... .....+.+|+++++.++||||+++++++.... .+++||||+.
T Consensus 19 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~lv~~~~~ 98 (311)
T cd07866 19 GTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMD 98 (311)
T ss_pred CCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccccccCceEEEEEecCC
Confidence 899999999985 5667777654322 12345678999999999999999999886543 3689999997
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC------
Q 014484 69 NETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK------ 142 (423)
Q Consensus 69 ~~~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~------ 142 (423)
+ +|...+.. ....+++..+..++.|++.||.|||+++ ++|+||||+||++++++.++|+|||+++......
T Consensus 99 ~-~l~~~~~~-~~~~~~~~~~~~i~~~l~~al~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 175 (311)
T cd07866 99 H-DLSGLLEN-PSVKLTESQIKCYMLQLLEGINYLHENH-ILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGG 175 (311)
T ss_pred c-CHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEECcCccchhccCCCcccccC
Confidence 6 77777643 3457999999999999999999999999 9999999999999999999999999987543221
Q ss_pred ---------ccccCcccCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhc-----------
Q 014484 143 ---------SYSTNLAFTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLM----------- 201 (423)
Q Consensus 143 ---------~~~~t~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~----------- 201 (423)
...+++.|+|||.+.+. .++.++|||||||++|+|++|.+||.......... .+....
T Consensus 176 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 254 (311)
T cd07866 176 GGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLH-LIFKLCGTPTEETWPGW 254 (311)
T ss_pred CcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHHHhCCCChhhchhh
Confidence 12346789999987654 48899999999999999999998876432111000 000000
Q ss_pred ---cc----cccCCCC-------hhHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014484 202 ---DS----ALEGHFS-------NDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (423)
Q Consensus 202 ---~~----~~~~~~~-------~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~ 241 (423)
.. ......+ ...++++.++|.+||+.||.+|||+.+++.|
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~ 308 (311)
T cd07866 255 RSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEH 308 (311)
T ss_pred hhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence 00 0000011 1233678999999999999999999999876
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-33 Score=251.86 Aligned_cols=232 Identities=20% Similarity=0.243 Sum_probs=190.3
Q ss_pred CCCccceeeee--cceeeeeecCCChhh--HHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 3 GRCSKFSICWF--HCHLKSSVLESSDLG--ETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 3 ~~g~v~~~~~~--~~~~~~~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
|||.||.+.+. +..+++|++...... .+.+.+|++.++.++|+||+++++++..+...+++|||+.+++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 68999999986 477888887654432 57889999999999999999999999999999999999999999999854
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC---CccccCcccCCccc
Q 014484 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTPPEY 155 (423)
Q Consensus 79 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~~t~~y~aPE~ 155 (423)
...+++..++.++.+++.++.+||+.+ ++|+||+|.||+++.++.++|+|||.+...... ....++..|++||.
T Consensus 81 --~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~ 157 (244)
T smart00220 81 --RGRLSEDEARFYARQILSALEYLHSNG-IIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMAPEV 157 (244)
T ss_pred --ccCCCHHHHHHHHHHHHHHHHHHHHcC-eecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCCCHHH
Confidence 223899999999999999999999999 999999999999999999999999998876653 44567889999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChh--HHHHHHHHHHHhcccCcCCCC
Q 014484 156 MRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND--EGTELVRLASRCLQSEARERP 233 (423)
Q Consensus 156 ~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~li~~cl~~dp~~Rp 233 (423)
+.+..++.++|+||||+++++|++|..|+.... .................... ++.++.+++.+||..+|++||
T Consensus 158 ~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp 233 (244)
T smart00220 158 LLGKGYGKAVDVWSLGVILYELLTGKPPFPGDD----QLLELFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPEKRL 233 (244)
T ss_pred HccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC----cHHHHHHHHhccCCCCccccccCCHHHHHHHHHHccCCchhcc
Confidence 988889999999999999999999998875521 01111111111111111111 667899999999999999999
Q ss_pred CHHHHHHH
Q 014484 234 NAKSLVIS 241 (423)
Q Consensus 234 s~~~vl~~ 241 (423)
++.+++++
T Consensus 234 ~~~~~~~~ 241 (244)
T smart00220 234 TAEEALQH 241 (244)
T ss_pred CHHHHhhC
Confidence 99999874
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-34 Score=228.59 Aligned_cols=237 Identities=19% Similarity=0.247 Sum_probs=187.1
Q ss_pred CCCCccceeeee--cceeeeeec--CCChhh-HHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVL--ESSDLG-ETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~--~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
|.||+||++... ..-++.|++ +..+.+ ....++||-+|+.+.|.|||+++++.-.++.+-+|+|||.. +|..+.
T Consensus 13 gtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~cdq-dlkkyf 91 (292)
T KOG0662|consen 13 GTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYF 91 (292)
T ss_pred CcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHhhH-HHHHHH
Confidence 789999999875 444555544 444433 56788999999999999999999999999999999999955 998887
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccCC
Q 014484 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTP 152 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~a 152 (423)
. .-++.++.+.+..++.|+++||.|+|+++ +.|||+||.|+|++.+|.+|++|||+++-.+-. +....|..|.+
T Consensus 92 d-slng~~d~~~~rsfmlqllrgl~fchshn-vlhrdlkpqnllin~ngelkladfglarafgipvrcysaevvtlwyrp 169 (292)
T KOG0662|consen 92 D-SLNGDLDPEIVRSFMLQLLRGLGFCHSHN-VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRP 169 (292)
T ss_pred H-hcCCcCCHHHHHHHHHHHHhhhhhhhhhh-hhhccCCcceEEeccCCcEEecccchhhhcCCceEeeeceeeeeeccC
Confidence 4 45677999999999999999999999999 999999999999999999999999999876654 34457899999
Q ss_pred ccccccCC-CCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhcc--------------ccccCCCC------
Q 014484 153 PEYMRTGR-VTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMD--------------SALEGHFS------ 210 (423)
Q Consensus 153 PE~~~~~~-~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~------ 210 (423)
|.++.+.+ |+...|+||-||++.|+.. |.+.|++.-........+..+-. ....+.++
T Consensus 170 pdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattsws 249 (292)
T KOG0662|consen 170 PDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWS 249 (292)
T ss_pred cceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHH
Confidence 99998876 8999999999999999987 55566664333222222221111 11111111
Q ss_pred ---hhHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014484 211 ---NDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (423)
Q Consensus 211 ---~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~ 241 (423)
+.+...-++++.+.|.-+|.+|.|+++.++|
T Consensus 250 qivp~lns~grdllqkll~cnp~qrisaeaalqh 283 (292)
T KOG0662|consen 250 QIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH 283 (292)
T ss_pred HHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence 1223456899999999999999999999876
|
|
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-33 Score=284.51 Aligned_cols=132 Identities=20% Similarity=0.197 Sum_probs=118.6
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.+. +..+++|++.... .....+..|+.++..++||||+++++++......|+||||+.|++|.++
T Consensus 15 G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVmEy~~g~~L~~l 94 (669)
T cd05610 15 GAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVMEYLIGGDVKSL 94 (669)
T ss_pred CCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEEeCCCCCCHHHH
Confidence 899999999986 7788888875432 2346788999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccc
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK 136 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~ 136 (423)
+.. .+.+++..++.++.||+.||.|||+++ |+||||||+|||++.++.++|+|||+++
T Consensus 95 i~~--~~~l~~~~~~~i~~qil~aL~yLH~~g-IiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 95 LHI--YGYFDEEMAVKYISEVALALDYLHRHG-IIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred HHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-EEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 854 346899999999999999999999999 9999999999999999999999999874
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-33 Score=254.07 Aligned_cols=236 Identities=17% Similarity=0.221 Sum_probs=183.7
Q ss_pred CCCCccceeeee--cceeeeeecC--CChhh------HHHHHHHHHHHhcCCCCCccceEeEEEeC-CceeEEEecCCCC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLE--SSDLG------ETLNLEEAKAVGNLRSERLANLIGCCYEA-DERLLVAEFMPNE 70 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~--~~~~~------~~~~~~E~~~l~~l~h~niv~~~~~~~~~-~~~~lv~e~~~~~ 70 (423)
|||+.||++.+. .+-+++|+-. +...+ .+...+|.++.+.|+||.||++|++|.-+ +.+|-|.|||+|.
T Consensus 474 GGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsFCTVLEYceGN 553 (775)
T KOG1151|consen 474 GGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFCTVLEYCEGN 553 (775)
T ss_pred ccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccceeeeeecCCC
Confidence 899999999986 4445555442 22221 22456899999999999999999999765 4588999999999
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCC-CeeeccCCCCCeeecC---CCCeEEccccccccCCCC-----
Q 014484 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKG-RALYHDLNAYRILFDK---DGNPRLSSFGLMKNSRDG----- 141 (423)
Q Consensus 71 ~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-~iiH~dlkp~Nill~~---~~~~kl~Dfg~~~~~~~~----- 141 (423)
+|+-+++ ..+.+++.++..|+.||+.||.||.... ||||-||||.|||+-+ .|.+||+|||+++.+...
T Consensus 554 DLDFYLK--QhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~v 631 (775)
T KOG1151|consen 554 DLDFYLK--QHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSV 631 (775)
T ss_pred chhHHHH--hhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhhhccCCccCcc
Confidence 9999996 4678999999999999999999999864 4999999999999943 467999999999876643
Q ss_pred ------CccccCcccCCccccccC----CCCCCcceehhHHHHHHHhhCCCCCCchhhH--HhhhchhhhhccccccCCC
Q 014484 142 ------KSYSTNLAFTPPEYMRTG----RVTPESVVYSFGTMLLDLLSGKHIPPSHALD--LIRSKNFLLLMDSALEGHF 209 (423)
Q Consensus 142 ------~~~~~t~~y~aPE~~~~~----~~~~~~Di~slG~~l~el~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 209 (423)
+...||.+|.+||++.-+ +++.|.||||+|||+|+++.|+.||...... ......+.+... ...+.
T Consensus 632 dGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkAtE--VqFP~ 709 (775)
T KOG1151|consen 632 DGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKATE--VQFPP 709 (775)
T ss_pred cceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhccee--ccCCC
Confidence 224589999999988644 3788999999999999999999998764211 111111111111 11122
Q ss_pred ChhHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014484 210 SNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (423)
Q Consensus 210 ~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~ 241 (423)
.+.++++..+||++||++.-++|..+.++..+
T Consensus 710 KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~d 741 (775)
T KOG1151|consen 710 KPVVSSEAKAFIRRCLAYRKEDRIDVQQLACD 741 (775)
T ss_pred CCccCHHHHHHHHHHHHhhhhhhhhHHHHccC
Confidence 34568899999999999999999999888755
|
|
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-34 Score=274.40 Aligned_cols=241 Identities=19% Similarity=0.274 Sum_probs=204.6
Q ss_pred CCCCCccceeeee------cceeeeeecCCCh--hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCH
Q 014484 1 MGGRCSKFSICWF------HCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (423)
Q Consensus 1 ~G~~g~v~~~~~~------~~~~~~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 72 (423)
+|+||.||++.|. ...|++|++.... .....++.|+-+|.+|+|||+++++++|..+. +-||++|+++|+|
T Consensus 706 sgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq~mP~G~L 784 (1177)
T KOG1025|consen 706 SGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQLMPLGCL 784 (1177)
T ss_pred cccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHHhcccchH
Confidence 6999999999995 3445556664433 34678999999999999999999999999876 7899999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCCcc------cc
Q 014484 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY------ST 146 (423)
Q Consensus 73 ~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~------~~ 146 (423)
.++++. ...++.....+.|..||++||.|||.+. ++||||-..|+||....++|+.|||+++........ ..
T Consensus 785 lDyvr~-hr~~igsq~lLnw~~QIAkgM~YLe~qr-lVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~~~~gK~ 862 (1177)
T KOG1025|consen 785 LDYVRE-HRDNIGSQDLLNWCYQIAKGMKYLEEQR-LVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYSAPGGKV 862 (1177)
T ss_pred HHHHHH-hhccccHHHHHHHHHHHHHHHHHHHhcc-hhhhhhhhhheeecCCCeEEEEecchhhccCccccccccccccc
Confidence 999975 4456889999999999999999999999 999999999999999999999999999987754332 23
Q ss_pred CcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhc
Q 014484 147 NLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCL 225 (423)
Q Consensus 147 t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 225 (423)
.+-|||-|.+....++.++|||||||++||++| |..|+.+ .....+..++....+-..|+.++-++.-++.+||
T Consensus 863 pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~g-----i~~~eI~dlle~geRLsqPpiCtiDVy~~mvkCw 937 (1177)
T KOG1025|consen 863 PIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDG-----IPAEEIPDLLEKGERLSQPPICTIDVYMVMVKCW 937 (1177)
T ss_pred CcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCC-----CCHHHhhHHHhccccCCCCCCccHHHHHHHHHHh
Confidence 577999999999999999999999999999988 6667666 3445556666666666677788999999999999
Q ss_pred ccCcCCCCCHHHHHHHHHhhhhhc
Q 014484 226 QSEARERPNAKSLVISLMSLQKEA 249 (423)
Q Consensus 226 ~~dp~~Rps~~~vl~~l~~~~~~~ 249 (423)
..|+..||+++++...+.++.+.+
T Consensus 938 mid~~~rp~fkel~~~fs~~ardp 961 (1177)
T KOG1025|consen 938 MIDADSRPTFKELAEEFSRMARDP 961 (1177)
T ss_pred ccCcccCccHHHHHHHHHHHhcCc
Confidence 999999999999998887765543
|
|
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=277.92 Aligned_cols=240 Identities=18% Similarity=0.287 Sum_probs=198.6
Q ss_pred CCCCccceeeee---------cceeeeeecCCCh--hhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCC
Q 014484 2 GGRCSKFSICWF---------HCHLKSSVLESSD--LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPN 69 (423)
Q Consensus 2 G~~g~v~~~~~~---------~~~~~~~~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 69 (423)
|.||.|+++... ...+++|.+.... ...+.+..|+++|+.+ .|+||+.++|+|..++..++|+||+..
T Consensus 307 g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~~v~Ey~~~ 386 (609)
T KOG0200|consen 307 GAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLYVIVEYAEH 386 (609)
T ss_pred ccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceEEEEEeccC
Confidence 889999999754 3456666664433 3477899999999999 699999999999999999999999999
Q ss_pred CCHHhhhccCC------C--------CCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEcccccc
Q 014484 70 ETLAKHLFHWE------T--------QPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLM 135 (423)
Q Consensus 70 ~~L~~~i~~~~------~--------~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~ 135 (423)
|+|.+++++.. . ..++....+.++.||+.|++||++.. +|||||-..|||+..+..+|++|||++
T Consensus 387 G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~-~vHRDLAaRNVLi~~~~~~kIaDFGla 465 (609)
T KOG0200|consen 387 GDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVP-CVHRDLAARNVLITKNKVIKIADFGLA 465 (609)
T ss_pred CcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCC-ccchhhhhhhEEecCCCEEEEccccce
Confidence 99999997533 0 13888999999999999999999999 999999999999999999999999999
Q ss_pred ccCCCCCcc-----c--cCcccCCccccccCCCCCCcceehhHHHHHHHhhCC-CCCCchhhHHhhhchhhhhccccccC
Q 014484 136 KNSRDGKSY-----S--TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGK-HIPPSHALDLIRSKNFLLLMDSALEG 207 (423)
Q Consensus 136 ~~~~~~~~~-----~--~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (423)
+........ . -+..|||||.+....|+.++||||+|+++|||+|.. .|+++. .....+...+....+.
T Consensus 466 r~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~----~~~~~l~~~l~~G~r~ 541 (609)
T KOG0200|consen 466 RDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGI----PPTEELLEFLKEGNRM 541 (609)
T ss_pred eccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCC----CcHHHHHHHHhcCCCC
Confidence 965443221 1 235699999999989999999999999999999955 555542 1122333455556666
Q ss_pred CCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhh
Q 014484 208 HFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQ 246 (423)
Q Consensus 208 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~~ 246 (423)
..|..++.++.++++.||..+|++||++.++...+....
T Consensus 542 ~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l 580 (609)
T KOG0200|consen 542 EQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHL 580 (609)
T ss_pred CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHH
Confidence 777888999999999999999999999999999998853
|
|
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-34 Score=241.79 Aligned_cols=243 Identities=21% Similarity=0.267 Sum_probs=182.3
Q ss_pred CCCCccceeeeec--ce--eeeeecCCChhh-HHHHHHHHHHHhcCCCCCccceEeEEEeC--------CceeEEEecCC
Q 014484 2 GGRCSKFSICWFH--CH--LKSSVLESSDLG-ETLNLEEAKAVGNLRSERLANLIGCCYEA--------DERLLVAEFMP 68 (423)
Q Consensus 2 G~~g~v~~~~~~~--~~--~~~~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~--------~~~~lv~e~~~ 68 (423)
|.||.||++...+ .. ++.+.+.+++.+ ....++|+++|..|.|+|++.++++|... ..+|+||.+|+
T Consensus 28 GtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~ylVf~~ce 107 (376)
T KOG0669|consen 28 GTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRATFYLVFDFCE 107 (376)
T ss_pred chHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccceeeeeHHHhh
Confidence 7889999998753 33 333444455544 34567999999999999999999888543 34799999998
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCCc-----
Q 014484 69 NETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS----- 143 (423)
Q Consensus 69 ~~~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~----- 143 (423)
. +|.-.+.+ ...+++..++.+++.+++.||.|+|.+. |+|||+||+|+|++.+|.+||+|||+++.......
T Consensus 108 h-DLaGlLsn-~~vr~sls~Ikk~Mk~Lm~GL~~iHr~k-ilHRDmKaaNvLIt~dgilklADFGlar~fs~~~n~~kpr 184 (376)
T KOG0669|consen 108 H-DLAGLLSN-RKVRFSLSEIKKVMKGLMNGLYYIHRNK-ILHRDMKAANVLITKDGILKLADFGLARAFSTSKNVVKPR 184 (376)
T ss_pred h-hHHHHhcC-ccccccHHHHHHHHHHHHHHHHHHHHhh-HHhhcccHhhEEEcCCceEEeeccccccceecccccCCCC
Confidence 7 99998854 3457999999999999999999999999 99999999999999999999999999976553322
Q ss_pred ---cccCcccCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHhh-------------------hchhhhh
Q 014484 144 ---YSTNLAFTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIR-------------------SKNFLLL 200 (423)
Q Consensus 144 ---~~~t~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~-------------------~~~~~~~ 200 (423)
...|..|.+||.+.|. .|+++.|||+-||++.||.|+.+.+.+....... +..+.+.
T Consensus 185 ytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~s 264 (376)
T KOG0669|consen 185 YTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQS 264 (376)
T ss_pred cccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHh
Confidence 2338899999988765 4999999999999999999999887654211100 0011111
Q ss_pred c--cccccCCC---Chh-----HHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhh
Q 014484 201 M--DSALEGHF---SND-----EGTELVRLASRCLQSEARERPNAKSLVISLMSLQK 247 (423)
Q Consensus 201 ~--~~~~~~~~---~~~-----~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~~~ 247 (423)
+ ++...+.+ ... -.++..++++++|..||.+|+++.+++.|-.-...
T Consensus 265 ie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kd 321 (376)
T KOG0669|consen 265 IELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKD 321 (376)
T ss_pred ccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcC
Confidence 1 00000000 000 02478899999999999999999999998655443
|
|
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=253.61 Aligned_cols=223 Identities=18% Similarity=0.268 Sum_probs=187.1
Q ss_pred CCCCccceeeeec--ceeeeeecCCCh----hhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWFH--CHLKSSVLESSD----LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~~--~~~~~~~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
||||.|..+...+ .-+++|++.+.- .+.+--+.|-++|... +-|.+++++..|..-+.+|+||||+.||+|--
T Consensus 360 GSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFVMEyvnGGDLMy 439 (683)
T KOG0696|consen 360 GSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFVMEYVNGGDLMY 439 (683)
T ss_pred CccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeEEEEecCchhhh
Confidence 8999999998864 446666665432 3344556677777666 57889999999999999999999999999998
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCC----CCCccccCccc
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSR----DGKSYSTNLAF 150 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~----~~~~~~~t~~y 150 (423)
.|+. -+.+.+..++-++.+|+-||-+||++| ||+||||.+||+++.+|++||+|||+++... ...+.+||+.|
T Consensus 440 hiQQ--~GkFKEp~AvFYAaEiaigLFFLh~kg-IiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~~TTkTFCGTPdY 516 (683)
T KOG0696|consen 440 HIQQ--VGKFKEPVAVFYAAEIAIGLFFLHSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDGVTTKTFCGTPDY 516 (683)
T ss_pred HHHH--hcccCCchhhhhhHHHHHHhhhhhcCC-eeeeeccccceEeccCCceEeeecccccccccCCcceeeecCCCcc
Confidence 8863 567999999999999999999999999 9999999999999999999999999998543 23567899999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcC
Q 014484 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (423)
Q Consensus 151 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (423)
+|||++..++|+...|+||+|++||||+.|++||.+.-.+ ..+..+.+.. -.+|..+|.+..+++...|.+.|.
T Consensus 517 iAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~----elF~aI~ehn--vsyPKslSkEAv~ickg~ltK~P~ 590 (683)
T KOG0696|consen 517 IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED----ELFQAIMEHN--VSYPKSLSKEAVAICKGLLTKHPG 590 (683)
T ss_pred cccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHH----HHHHHHHHcc--CcCcccccHHHHHHHHHHhhcCCc
Confidence 9999999999999999999999999999999999886222 2233333322 247888999999999999999999
Q ss_pred CCC
Q 014484 231 ERP 233 (423)
Q Consensus 231 ~Rp 233 (423)
+|.
T Consensus 591 kRL 593 (683)
T KOG0696|consen 591 KRL 593 (683)
T ss_pred ccc
Confidence 993
|
|
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.9e-32 Score=246.13 Aligned_cols=241 Identities=17% Similarity=0.209 Sum_probs=185.1
Q ss_pred CCCCccceeeeecceeeeeecCCChhhHHHHHHHHHHH--hcCCCCCccceEeEEEeCC----ceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAV--GNLRSERLANLIGCCYEAD----ERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l--~~l~h~niv~~~~~~~~~~----~~~lv~e~~~~~~L~~~ 75 (423)
|-||.|+++.|+|..||+|+|...+.. .+++|.++. ..|+|+||+.|++.-..+. .+|||++|.+.|||.+|
T Consensus 222 GRyGEVwrG~wrGe~VAVKiF~srdE~--SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~Dy 299 (513)
T KOG2052|consen 222 GRFGEVWRGRWRGEDVAVKIFSSRDER--SWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDYHEHGSLYDY 299 (513)
T ss_pred ccccceeeccccCCceEEEEecccchh--hhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeeecccCCcHHHH
Confidence 889999999999999999999887654 444555554 4569999999999876654 37999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcC-----CC--eeeccCCCCCeeecCCCCeEEccccccccCCCC-------
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSK-----GR--ALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------- 141 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-----~~--iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~------- 141 (423)
+.+ ..++.+..++++..++.||.+||.. |+ |.|||||+.||||.++|...|+|+|+|....+.
T Consensus 300 L~r---~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~t~~idi~ 376 (513)
T KOG2052|consen 300 LNR---NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSDTDTIDIP 376 (513)
T ss_pred Hhh---ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEecccCCcccCC
Confidence 954 5699999999999999999999963 22 999999999999999999999999999765533
Q ss_pred -CccccCcccCCccccccCC----C--CCCcceehhHHHHHHHhhCC----------CCCCchhhHHhhhchhhhhc---
Q 014484 142 -KSYSTNLAFTPPEYMRTGR----V--TPESVVYSFGTMLLDLLSGK----------HIPPSHALDLIRSKNFLLLM--- 201 (423)
Q Consensus 142 -~~~~~t~~y~aPE~~~~~~----~--~~~~Di~slG~~l~el~~g~----------~~~~~~~~~~~~~~~~~~~~--- 201 (423)
...+||.+|||||++...- + -..+||||||.|+||++... .||..........++..+.+
T Consensus 377 ~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~ 456 (513)
T KOG2052|consen 377 PNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQ 456 (513)
T ss_pred CCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeec
Confidence 3457999999999986431 1 22699999999999997622 24433222222222222222
Q ss_pred --cccccCCC-ChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhh
Q 014484 202 --DSALEGHF-SNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQK 247 (423)
Q Consensus 202 --~~~~~~~~-~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~~~ 247 (423)
.+.+...+ +.+.-..+.++++.||..+|..|-|+-.+-+.+.++.+
T Consensus 457 ~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 457 KLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred ccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 22222222 22345678899999999999999999998888877764
|
|
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.2e-32 Score=256.95 Aligned_cols=233 Identities=17% Similarity=0.212 Sum_probs=177.0
Q ss_pred CCCCCccceeeee--cceeeeeecCCChh----hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 1 MGGRCSKFSICWF--HCHLKSSVLESSDL----GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 1 ~G~~g~v~~~~~~--~~~~~~~~~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
+|+||.|..++-. .--++.|.+.+.+. .......|..||...+++.||++|-.|.+++.+|+||+|++||++-.
T Consensus 639 vGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMdYIPGGDmMS 718 (1034)
T KOG0608|consen 639 VGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMS 718 (1034)
T ss_pred ccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEeccCCccHHH
Confidence 5999999988753 33345555444332 12345568999999999999999999999999999999999999998
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCC--------------
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD-------------- 140 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~-------------- 140 (423)
++.+ -+-|+++.+..++.++..|+++.|..| +|||||||+|||||.+|++||+||||+.-++.
T Consensus 719 LLIr--mgIFeE~LARFYIAEltcAiesVHkmG-FIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYYq~gdH~R 795 (1034)
T KOG0608|consen 719 LLIR--MGIFEEDLARFYIAELTCAIESVHKMG-FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQEGDHHR 795 (1034)
T ss_pred HHHH--hccCHHHHHHHHHHHHHHHHHHHHhcc-ceecccCccceEEccCCceeeeeccccccceeccccccccCCCccc
Confidence 8864 456999999999999999999999999 99999999999999999999999999863220
Q ss_pred --------------------------------CCccccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchh
Q 014484 141 --------------------------------GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHA 188 (423)
Q Consensus 141 --------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~ 188 (423)
....+||+.|+|||++....++..+|+||.|+|||||+.|++||....
T Consensus 796 qDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~pf~~~t 875 (1034)
T KOG0608|consen 796 QDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQPPFLADT 875 (1034)
T ss_pred cccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhCCCCccCCC
Confidence 012357899999999999999999999999999999999999986542
Q ss_pred hHHhhhchhhhhcc--ccccCCCChhHHHHHHHHHHHhcccCcCCCC---CHHHHHHH
Q 014484 189 LDLIRSKNFLLLMD--SALEGHFSNDEGTELVRLASRCLQSEARERP---NAKSLVIS 241 (423)
Q Consensus 189 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp---s~~~vl~~ 241 (423)
..+...+++. ..+.-.+...+++++.++|.++. .+++.|. -.++|-.|
T Consensus 876 ----p~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc-~sad~RLGkng~d~vKaH 928 (1034)
T KOG0608|consen 876 ----PGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLC-CSADSRLGKNGADQVKAH 928 (1034)
T ss_pred ----CCcceeeeeehhhccccccccccCHHHHHHHHHHh-cChhhhhcccchhhhhcC
Confidence 1121112221 12222334456778888887643 3455552 33445444
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-32 Score=266.18 Aligned_cols=229 Identities=19% Similarity=0.157 Sum_probs=178.0
Q ss_pred CccceeeeecceeeeeecCCChhhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccC-CCC
Q 014484 5 CSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW-ETQ 82 (423)
Q Consensus 5 g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~-~~~ 82 (423)
+.||.+++-++.||+|++..... +...+||..|+.- .|||||++++.-.++...||..|+|.. +|.+++... ...
T Consensus 524 t~Vf~G~ye~R~VAVKrll~e~~--~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~~-sL~dlie~~~~d~ 600 (903)
T KOG1027|consen 524 TVVFRGVYEGREVAVKRLLEEFF--DFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCAC-SLQDLIESSGLDV 600 (903)
T ss_pred cEEEEEeeCCceehHHHHhhHhH--HHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhhh-hHHHHHhccccch
Confidence 36899999999999999876653 3567999999999 799999999999999999999999966 999999642 111
Q ss_pred -CCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecC---CC--CeEEccccccccCCCC-------CccccCcc
Q 014484 83 -PMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK---DG--NPRLSSFGLMKNSRDG-------KSYSTNLA 149 (423)
Q Consensus 83 -~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~---~~--~~kl~Dfg~~~~~~~~-------~~~~~t~~ 149 (423)
.......+.++.|+++||.+||+.+ ||||||||.||||+. ++ +++|+|||+++..... ....||-+
T Consensus 601 ~~~~~i~~~~~l~q~~~GlaHLHsl~-iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~G 679 (903)
T KOG1027|consen 601 EMQSDIDPISVLSQIASGLAHLHSLK-IVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSG 679 (903)
T ss_pred hhcccccHHHHHHHHHHHHHHHHhcc-cccccCCCceEEEEccCCCcceeEEecccccccccCCCcchhhcccCCCCccc
Confidence 1111345788999999999999999 999999999999976 34 6899999999977644 33568999
Q ss_pred cCCccccccCCCCCCcceehhHHHHHHHhhC-CCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccC
Q 014484 150 FTPPEYMRTGRVTPESVVYSFGTMLLDLLSG-KHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSE 228 (423)
Q Consensus 150 y~aPE~~~~~~~~~~~Di~slG~~l~el~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 228 (423)
|+|||++....-+...||||+||++|+.++| ..||........ ++......-..-....++ +..++|.+|+.+|
T Consensus 680 W~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~---NIl~~~~~L~~L~~~~d~--eA~dLI~~ml~~d 754 (903)
T KOG1027|consen 680 WQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQA---NILTGNYTLVHLEPLPDC--EAKDLISRMLNPD 754 (903)
T ss_pred ccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhh---hhhcCccceeeeccCchH--HHHHHHHHhcCCC
Confidence 9999999988888899999999999999998 466655321111 111000000000111111 7899999999999
Q ss_pred cCCCCCHHHHHHHH
Q 014484 229 ARERPNAKSLVISL 242 (423)
Q Consensus 229 p~~Rps~~~vl~~l 242 (423)
|..||++.+|+.|.
T Consensus 755 P~~RPsa~~VL~HP 768 (903)
T KOG1027|consen 755 PQLRPSATDVLNHP 768 (903)
T ss_pred cccCCCHHHHhCCC
Confidence 99999999999884
|
|
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.5e-31 Score=264.04 Aligned_cols=238 Identities=16% Similarity=0.177 Sum_probs=153.5
Q ss_pred CCCCccceeeee------cceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeE------EEeCCceeEEEecCCC
Q 014484 2 GGRCSKFSICWF------HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGC------CYEADERLLVAEFMPN 69 (423)
Q Consensus 2 G~~g~v~~~~~~------~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~------~~~~~~~~lv~e~~~~ 69 (423)
|+||.||++.+. +..+++|.+..... .+.+..| .+....+.+++.+... +..+...++||||+.+
T Consensus 143 G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~-~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~LV~ey~~~ 219 (566)
T PLN03225 143 GAFGVVYKASLVNKQSKKEGKYVLKKATEYGA-VEIWMNE--RVRRACPNSCADFVYGFLEPVSSKKEDEYWLVWRYEGE 219 (566)
T ss_pred CCCeEEEEEEEcCCccccCcEEEEEEecccch-hHHHHHH--HHHhhchhhHHHHHHhhhcccccccCCceEEEEEecCC
Confidence 899999999985 45677776543221 1111111 1112222222222221 2455678999999999
Q ss_pred CCHHhhhccCCC------------------CCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecC-CCCeEEc
Q 014484 70 ETLAKHLFHWET------------------QPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK-DGNPRLS 130 (423)
Q Consensus 70 ~~L~~~i~~~~~------------------~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~-~~~~kl~ 130 (423)
++|.+++..... .......+..++.||+.||.|||+++ |+||||||+|||++. ++.+||+
T Consensus 220 gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~g-IiHRDLKP~NILl~~~~~~~KL~ 298 (566)
T PLN03225 220 STLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTG-IVHRDVKPQNIIFSEGSGSFKII 298 (566)
T ss_pred CcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCC-EEeCcCCHHHEEEeCCCCcEEEE
Confidence 999998854211 01123346689999999999999999 999999999999985 5789999
Q ss_pred cccccccCCCC-----CccccCcccCCccccccC----------------------CCCCCcceehhHHHHHHHhhCCCC
Q 014484 131 SFGLMKNSRDG-----KSYSTNLAFTPPEYMRTG----------------------RVTPESVVYSFGTMLLDLLSGKHI 183 (423)
Q Consensus 131 Dfg~~~~~~~~-----~~~~~t~~y~aPE~~~~~----------------------~~~~~~Di~slG~~l~el~~g~~~ 183 (423)
|||+++..... ....+++.|+|||.+... .++.++||||+||++|||+++..+
T Consensus 299 DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~ 378 (566)
T PLN03225 299 DLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLR 378 (566)
T ss_pred eCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCC
Confidence 99999865432 345678999999965422 234567999999999999997655
Q ss_pred CCchhhHHh---hh-----chhhhhccccccCCCC------hhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 184 PPSHALDLI---RS-----KNFLLLMDSALEGHFS------NDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 184 ~~~~~~~~~---~~-----~~~~~~~~~~~~~~~~------~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
+........ .. ..+............. ........+||.+||+.||++|||++++++|-.
T Consensus 379 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~Hpf 452 (566)
T PLN03225 379 SDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRISAKAALAHPY 452 (566)
T ss_pred CchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccCCCHHHHhCCcC
Confidence 433211100 00 0011111111000000 001233558999999999999999999998844
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.9e-32 Score=233.56 Aligned_cols=239 Identities=15% Similarity=0.176 Sum_probs=183.5
Q ss_pred CCCCccceeeee--cceeeeeecCCChh---hHHHHHHHHHHHhcCCCCCccceEeEEEeCC-----ceeEEEecCCCCC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDL---GETLNLEEAKAVGNLRSERLANLIGCCYEAD-----ERLLVAEFMPNET 71 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-----~~~lv~e~~~~~~ 71 (423)
|+||.||..++- ++.++.+.+.+..+ ..+.+++|+++|..++|.|++..++...-.. ++|+++|++.. +
T Consensus 64 GAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TELmQS-D 142 (449)
T KOG0664|consen 64 GAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTELMQS-D 142 (449)
T ss_pred cceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHHHHHh-h
Confidence 889999988873 67777777666544 3568899999999999999999988776443 47899999965 9
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCCcc-----cc
Q 014484 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY-----ST 146 (423)
Q Consensus 72 L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~-----~~ 146 (423)
|...|- +.+.++.+.+.-+..||++||+|||+.+ |+||||||.|+|++.+..+||||||+++........ ..
T Consensus 143 LHKIIV--SPQ~Ls~DHvKVFlYQILRGLKYLHsA~-ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~hMTqEVV 219 (449)
T KOG0664|consen 143 LHKIIV--SPQALTPDHVKVFVYQILRGLKYLHTAN-ILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLNMTHEVV 219 (449)
T ss_pred hhheec--cCCCCCcchhhhhHHHHHhhhHHHhhcc-hhhccCCCccEEeccCceEEecccccccccchhhhhhhHHHHH
Confidence 999884 5778999999999999999999999999 999999999999999999999999999876654332 34
Q ss_pred CcccCCccccccCC-CCCCcceehhHHHHHHHhhCCCCCCchhhHH--------------------hhhchhhhhccccc
Q 014484 147 NLAFTPPEYMRTGR-VTPESVVYSFGTMLLDLLSGKHIPPSHALDL--------------------IRSKNFLLLMDSAL 205 (423)
Q Consensus 147 t~~y~aPE~~~~~~-~~~~~Di~slG~~l~el~~g~~~~~~~~~~~--------------------~~~~~~~~~~~~~~ 205 (423)
|-.|.|||++.|.. |+...||||+||++.|++..+..|.....-. .++....-+.....
T Consensus 220 TQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k 299 (449)
T KOG0664|consen 220 TQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLR 299 (449)
T ss_pred HHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCC
Confidence 78899999998765 9999999999999999998776664321000 00001110111111
Q ss_pred cCCCC--------hhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHh
Q 014484 206 EGHFS--------NDEGTELVRLASRCLQSEARERPNAKSLVISLMS 244 (423)
Q Consensus 206 ~~~~~--------~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~ 244 (423)
.+.++ .....+...++..++..||+.|.+.++.+.++..
T Consensus 300 ~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~ 346 (449)
T KOG0664|consen 300 APDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYL 346 (449)
T ss_pred CCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccc
Confidence 11111 1223467788899999999999999999988644
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-31 Score=233.07 Aligned_cols=230 Identities=15% Similarity=0.158 Sum_probs=176.4
Q ss_pred cceeee--ecceeeeeecCCChh---hHHHHHHHHHHHhcCCCCCccceEeEEEeCC------ceeEEEecCCCCCHHhh
Q 014484 7 KFSICW--FHCHLKSSVLESSDL---GETLNLEEAKAVGNLRSERLANLIGCCYEAD------ERLLVAEFMPNETLAKH 75 (423)
Q Consensus 7 v~~~~~--~~~~~~~~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------~~~lv~e~~~~~~L~~~ 75 (423)
|..+.+ .++.+++|.+..+.. ...+..+|..++..+.|+||++++.+|.-.. ..|+|||++.. +|.+.
T Consensus 32 v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e~m~~-nl~~v 110 (369)
T KOG0665|consen 32 VVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVMELMDA-NLCQV 110 (369)
T ss_pred EEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHHHhhhh-HHHHH
Confidence 444444 366677765544332 2446678999999999999999999998654 36999999966 99998
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC---CccccCcccCC
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTP 152 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~~t~~y~a 152 (423)
+. -.++-+.+..+..|++.|+++||+.| |+||||||+||++..++.+||.|||+++..... +....|..|.|
T Consensus 111 i~----~elDH~tis~i~yq~~~~ik~lhs~~-IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~~~mtpyVvtRyyra 185 (369)
T KOG0665|consen 111 IL----MELDHETISYILYQMLCGIKHLHSAG-IIHRDLKPSNIVVNSDCTLKILDFGLARTEDTDFMMTPYVVTRYYRA 185 (369)
T ss_pred HH----HhcchHHHHHHHHHHHHHHHHHHhcc-eeecccCcccceecchhheeeccchhhcccCcccccCchhheeeccC
Confidence 84 34778899999999999999999999 999999999999999999999999999865543 44567889999
Q ss_pred ccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHH-hh--------------------h------------chhhh
Q 014484 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDL-IR--------------------S------------KNFLL 199 (423)
Q Consensus 153 PE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~-~~--------------------~------------~~~~~ 199 (423)
||++.+..+....||||+||++.||++|...|++...-. +. . ..+..
T Consensus 186 pevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~ 265 (369)
T KOG0665|consen 186 PEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSE 265 (369)
T ss_pred chheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhh
Confidence 999998889999999999999999999998887541000 00 0 00111
Q ss_pred hccccccC---CCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHH
Q 014484 200 LMDSALEG---HFSNDEGTELVRLASRCLQSEARERPNAKSLVISL 242 (423)
Q Consensus 200 ~~~~~~~~---~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l 242 (423)
..+..... +.++.-+..+++++.+||..||+.|.|++++|+|.
T Consensus 266 ~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HP 311 (369)
T KOG0665|consen 266 LFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHP 311 (369)
T ss_pred hCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCC
Confidence 11111100 01112245689999999999999999999999884
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=215.27 Aligned_cols=186 Identities=15% Similarity=0.177 Sum_probs=153.4
Q ss_pred CCCCccceeee--ecceeeeeecC--CChhhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICW--FHCHLKSSVLE--SSDLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~--~~~~~~~~~~~--~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
|++|.|=+... .+.-+++|.+. ...+.....++|+.+..+. ..|.+|+++|........++.||.+.- ||+.+-
T Consensus 57 GayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~t-Sldkfy 135 (282)
T KOG0984|consen 57 GAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMDT-SLDKFY 135 (282)
T ss_pred CccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhhh-hHHHHH
Confidence 56665544433 46667776653 3455677888999988777 799999999999999999999999965 888776
Q ss_pred cc--CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC---ccccCcccC
Q 014484 77 FH--WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK---SYSTNLAFT 151 (423)
Q Consensus 77 ~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---~~~~t~~y~ 151 (423)
++ ..++.+++..+-+|+..++.||.|||++-.+||||+||+|||++.+|.+|+||||++-.+.++. ...|...||
T Consensus 136 ~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiAkt~daGCkpYm 215 (282)
T KOG0984|consen 136 RKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIAKTMDAGCKPYM 215 (282)
T ss_pred HHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehhhhHHHHhcCCCccC
Confidence 52 2467899999999999999999999998669999999999999999999999999987665542 256788999
Q ss_pred Ccccccc----CCCCCCcceehhHHHHHHHhhCCCCCCchh
Q 014484 152 PPEYMRT----GRVTPESVVYSFGTMLLDLLSGKHIPPSHA 188 (423)
Q Consensus 152 aPE~~~~----~~~~~~~Di~slG~~l~el~~g~~~~~~~~ 188 (423)
|||.+.. ..|+.++||||||+++.||.+++.|++.+.
T Consensus 216 aPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~ 256 (282)
T KOG0984|consen 216 APERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWG 256 (282)
T ss_pred ChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccC
Confidence 9998763 359999999999999999999998887653
|
|
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=8e-30 Score=248.98 Aligned_cols=241 Identities=14% Similarity=0.136 Sum_probs=167.0
Q ss_pred CCCCccceeeee------------------cceeeeeecCCChhh-HHH--------------HHHHHHHHhcCCCCCc-
Q 014484 2 GGRCSKFSICWF------------------HCHLKSSVLESSDLG-ETL--------------NLEEAKAVGNLRSERL- 47 (423)
Q Consensus 2 G~~g~v~~~~~~------------------~~~~~~~~~~~~~~~-~~~--------------~~~E~~~l~~l~h~ni- 47 (423)
||||.||++.+. ++.+++|.+...... ... +..|+.++.+++|.++
T Consensus 156 GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~~~l~~l~~~~l~ 235 (507)
T PLN03224 156 GNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEAYMCAKIKRNPIA 235 (507)
T ss_pred CCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHHHHHHHhhcccch
Confidence 899999998752 345777776543321 222 3347777777766554
Q ss_pred ----cceEeEEEe--------CCceeEEEecCCCCCHHhhhccCC----------------------CCCCCHHHHHHHH
Q 014484 48 ----ANLIGCCYE--------ADERLLVAEFMPNETLAKHLFHWE----------------------TQPMKWAMRLRVA 93 (423)
Q Consensus 48 ----v~~~~~~~~--------~~~~~lv~e~~~~~~L~~~i~~~~----------------------~~~~~~~~~~~i~ 93 (423)
++++++|.. .+..++||||+++++|.+++.... ...+++..+..++
T Consensus 236 ~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~ 315 (507)
T PLN03224 236 AASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVM 315 (507)
T ss_pred hhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHH
Confidence 677777753 346799999999999999885311 1124567889999
Q ss_pred HHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCCc-----cccCcccCCccccccCC--------
Q 014484 94 LYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS-----YSTNLAFTPPEYMRTGR-------- 160 (423)
Q Consensus 94 ~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-----~~~t~~y~aPE~~~~~~-------- 160 (423)
.|++.+|.|||+++ |+||||||+||+++.++.++|+|||+++....... ..+++.|+|||.+....
T Consensus 316 ~ql~~aL~~lH~~~-ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~ 394 (507)
T PLN03224 316 RQVLTGLRKLHRIG-IVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELVMPQSCPRAPAP 394 (507)
T ss_pred HHHHHHHHHHHHCC-eecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhhcCCCCCCccchh
Confidence 99999999999999 99999999999999999999999999876543221 12378999999875322
Q ss_pred ------------C--CCCcceehhHHHHHHHhhCCC-CCCchhhHHhhh-------chhhhhccccccCCCChhHHHHHH
Q 014484 161 ------------V--TPESVVYSFGTMLLDLLSGKH-IPPSHALDLIRS-------KNFLLLMDSALEGHFSNDEGTELV 218 (423)
Q Consensus 161 ------------~--~~~~Di~slG~~l~el~~g~~-~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~l~ 218 (423)
+ ..+.|+||+||++++|++|.. |+.......... ..+................++...
T Consensus 395 ~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~d~~s~~~~ 474 (507)
T PLN03224 395 AMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYDFSLLDRNKEAGW 474 (507)
T ss_pred hhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCCcccccccChHHH
Confidence 1 124799999999999999875 332210000000 001111111111112234578899
Q ss_pred HHHHHhcccCc---CCCCCHHHHHHHHH
Q 014484 219 RLASRCLQSEA---RERPNAKSLVISLM 243 (423)
Q Consensus 219 ~li~~cl~~dp---~~Rps~~~vl~~l~ 243 (423)
+++.+||..+| .+|+|+++++.|.+
T Consensus 475 dLi~~LL~~~~~~~~~RlSa~eaL~Hp~ 502 (507)
T PLN03224 475 DLACKLITKRDQANRGRLSVGQALSHRF 502 (507)
T ss_pred HHHHHHhccCCCCcccCCCHHHHhCCCC
Confidence 99999999876 68999999998854
|
|
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.7e-30 Score=228.08 Aligned_cols=240 Identities=19% Similarity=0.215 Sum_probs=194.9
Q ss_pred CCCCccceeeeecce-------eeeeec--CCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCC-ceeEEEecCCCCC
Q 014484 2 GGRCSKFSICWFHCH-------LKSSVL--ESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEAD-ERLLVAEFMPNET 71 (423)
Q Consensus 2 G~~g~v~~~~~~~~~-------~~~~~~--~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~lv~e~~~~~~ 71 (423)
|.||.||++.|...+ +-+|.+ ..+......++.|--.+..+.|||+..+.+++.++. ..++++.+..-|+
T Consensus 295 GtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~V~y~~~~~gN 374 (563)
T KOG1024|consen 295 GTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPFVLYPATGVGN 374 (563)
T ss_pred CchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcceEEEeccCcch
Confidence 899999999885322 222222 223445667889999999999999999999987654 5789999998999
Q ss_pred HHhhhc-----c-CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCCc--
Q 014484 72 LAKHLF-----H-WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS-- 143 (423)
Q Consensus 72 L~~~i~-----~-~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-- 143 (423)
|..|++ + ...+.++..+.+.++.|++.|++|||+++ |||.||-..|.++|+.-.+||+|-.+++...+..-
T Consensus 375 LK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~-ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP~DYhc 453 (563)
T KOG1024|consen 375 LKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHG-VIHKDIAARNCVIDDQLQVKLTDSALSRDLFPGDYHC 453 (563)
T ss_pred HHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcC-cccchhhhhcceehhheeEEeccchhccccCcccccc
Confidence 999997 2 12345778889999999999999999999 99999999999999999999999999998776533
Q ss_pred ----cccCcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHH
Q 014484 144 ----YSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELV 218 (423)
Q Consensus 144 ----~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 218 (423)
...+..||+||.+....|+..+|+||||+++|||+| |+.|+-. .........+....+-..|-++|.++.
T Consensus 454 LGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~Pyae-----IDPfEm~~ylkdGyRlaQP~NCPDeLf 528 (563)
T KOG1024|consen 454 LGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAE-----IDPFEMEHYLKDGYRLAQPFNCPDELF 528 (563)
T ss_pred cCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccc-----cCHHHHHHHHhccceecCCCCCcHHHH
Confidence 335678999999999999999999999999999998 4445433 233344444555555566778999999
Q ss_pred HHHHHhcccCcCCCCCHHHHHHHHHhhhh
Q 014484 219 RLASRCLQSEARERPNAKSLVISLMSLQK 247 (423)
Q Consensus 219 ~li~~cl~~dp~~Rps~~~vl~~l~~~~~ 247 (423)
.++..||..+|++||+++++..-|...-.
T Consensus 529 ~vMacCWallpeeRPsf~Qlv~cLseF~~ 557 (563)
T KOG1024|consen 529 TVMACCWALLPEERPSFSQLVICLSEFHT 557 (563)
T ss_pred HHHHHHHhcCcccCCCHHHHHHHHHHHHH
Confidence 99999999999999999999998876543
|
|
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=241.61 Aligned_cols=239 Identities=16% Similarity=0.152 Sum_probs=187.8
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHHhcCC------CCCccceEeEEEeCCceeEEEecCCCCCHH
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNLR------SERLANLIGCCYEADERLLVAEFMPNETLA 73 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 73 (423)
|-|+.|..+.+. +..||+|++.+.....+.=+.|+++|++|+ -.|+++++..|...+++|||+|-+.- +|.
T Consensus 443 GvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLClVFE~Lsl-NLR 521 (752)
T KOG0670|consen 443 GVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLCLVFEPLSL-NLR 521 (752)
T ss_pred ceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeEEEehhhhc-hHH
Confidence 556677777664 678999999998888888889999999995 35799999999999999999999955 999
Q ss_pred hhhccC-CCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCC-CeEEccccccccCCCCC--ccccCcc
Q 014484 74 KHLFHW-ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG-NPRLSSFGLMKNSRDGK--SYSTNLA 149 (423)
Q Consensus 74 ~~i~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~-~~kl~Dfg~~~~~~~~~--~~~~t~~ 149 (423)
+++++- .+-.+....+..++.|+..||..|...| |+|+||||.||||+... .+||||||.|-...... ....+..
T Consensus 522 evLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~-vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~eneitPYLVSRF 600 (752)
T KOG0670|consen 522 EVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCG-VLHADIKPDNILVNESKNILKLCDFGSASFASENEITPYLVSRF 600 (752)
T ss_pred HHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcC-eeecccCccceEeccCcceeeeccCccccccccccccHHHHHHh
Confidence 999752 2235777889999999999999999999 99999999999998664 68999999987665442 3456778
Q ss_pred cCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhh---------------------chhhh---------
Q 014484 150 FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRS---------------------KNFLL--------- 199 (423)
Q Consensus 150 y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~---------------------~~~~~--------- 199 (423)
|.|||++.|.+|+...|+||+||+||||.||+..|++.....+.. +.+..
T Consensus 601 YRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~ 680 (752)
T KOG0670|consen 601 YRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEV 680 (752)
T ss_pred ccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEec
Confidence 999999999999999999999999999999999998763222111 00000
Q ss_pred -------------hccc------cc--cCCCCh---hHHHHHHHHHHHhcccCcCCCCCHHHHHHHH
Q 014484 200 -------------LMDS------AL--EGHFSN---DEGTELVRLASRCLQSEARERPNAKSLVISL 242 (423)
Q Consensus 200 -------------~~~~------~~--~~~~~~---~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l 242 (423)
.+.+ .+ ...++. ..-..+.+|+.+||..||+.|.|+.+.|.|.
T Consensus 681 D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~Hp 747 (752)
T KOG0670|consen 681 DKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKHP 747 (752)
T ss_pred cccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcCC
Confidence 0000 00 001121 1235789999999999999999999999873
|
|
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-30 Score=229.38 Aligned_cols=226 Identities=15% Similarity=0.263 Sum_probs=183.7
Q ss_pred CCCCccceeeee--cceeeeeec----CCChhhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVL----ESSDLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~----~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|+|..|..+... ..-+++|++ .+.+.+.+..+.|-.+..+. +||.+|-++.+|.....+++|.||++||+|--
T Consensus 261 gsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffvieyv~ggdlmf 340 (593)
T KOG0695|consen 261 GSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFVIEYVNGGDLMF 340 (593)
T ss_pred cchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEEEEEecCcceee
Confidence 566666655543 333444444 44556677888888888888 79999999999999999999999999999977
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCC----CCCccccCccc
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSR----DGKSYSTNLAF 150 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~----~~~~~~~t~~y 150 (423)
++++ ++.++++.+.-+..+|+.||.|||+.| ||.||||.+|+|+|..|++||+|+|.++..- ..++++||+.|
T Consensus 341 hmqr--qrklpeeharfys~ei~lal~flh~rg-iiyrdlkldnvlldaeghikltdygmcke~l~~gd~tstfcgtpny 417 (593)
T KOG0695|consen 341 HMQR--QRKLPEEHARFYSAEICLALNFLHERG-IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGDTTSTFCGTPNY 417 (593)
T ss_pred ehhh--hhcCcHHHhhhhhHHHHHHHHHHhhcC-eeeeeccccceEEccCCceeecccchhhcCCCCCcccccccCCCcc
Confidence 7753 567999999999999999999999999 9999999999999999999999999987432 34678999999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHh----hhchhhhhccccccCCCChhHHHHHHHHHHHhcc
Q 014484 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLI----RSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (423)
Q Consensus 151 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (423)
.|||++++..|+...|+|+||++++||+.|+.||.--+.+.. ....+..++...+ .+|..++-....+++.-|.
T Consensus 418 iapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqi--riprslsvkas~vlkgfln 495 (593)
T KOG0695|consen 418 IAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQI--RIPRSLSVKASHVLKGFLN 495 (593)
T ss_pred cchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcc--cccceeehhhHHHHHHhhc
Confidence 999999999999999999999999999999999864432221 1122222333332 3566677788899999999
Q ss_pred cCcCCC
Q 014484 227 SEARER 232 (423)
Q Consensus 227 ~dp~~R 232 (423)
+||.+|
T Consensus 496 kdp~er 501 (593)
T KOG0695|consen 496 KDPKER 501 (593)
T ss_pred CCcHHh
Confidence 999999
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.5e-29 Score=219.74 Aligned_cols=202 Identities=25% Similarity=0.350 Sum_probs=179.5
Q ss_pred CCCCccceeeee--cceeeeeecCCChh--hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDL--GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~ 77 (423)
|++|.||++... +..+.+|++..... ....+.+|++.++.++|++|+++++++......+++||++.|++|.+++.
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~ 83 (215)
T cd00180 4 GGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLK 83 (215)
T ss_pred CCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHHHHH
Confidence 889999999987 77788888776654 25789999999999999999999999999999999999999999999985
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecC-CCCeEEccccccccCCCC----CccccCcccCC
Q 014484 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK-DGNPRLSSFGLMKNSRDG----KSYSTNLAFTP 152 (423)
Q Consensus 78 ~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~-~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~a 152 (423)
.. ...++...++.++.+++.++.+||+.+ ++|+||+|.||+++. ++.++|+|||.+...... ....+...|++
T Consensus 84 ~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~-~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (215)
T cd00180 84 EN-EGKLSEDEILRILLQILEGLEYLHSNG-IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMA 161 (215)
T ss_pred hc-cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccCCCCccC
Confidence 42 146899999999999999999999999 999999999999999 899999999998766543 33456788999
Q ss_pred ccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCC
Q 014484 153 PEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARE 231 (423)
Q Consensus 153 PE~~~~~-~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (423)
||.+... ..+.++|+|++|+++++| ..+.+++.+|++.||.+
T Consensus 162 pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------------~~~~~~l~~~l~~~p~~ 204 (215)
T cd00180 162 PEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------------PELKDLIRKMLQKDPEK 204 (215)
T ss_pred hhHhcccCCCCchhhhHHHHHHHHHH-------------------------------------HHHHHHHHHHhhCCccc
Confidence 9998877 788999999999999998 46899999999999999
Q ss_pred CCCHHHHHHHH
Q 014484 232 RPNAKSLVISL 242 (423)
Q Consensus 232 Rps~~~vl~~l 242 (423)
||++.++++++
T Consensus 205 R~~~~~l~~~~ 215 (215)
T cd00180 205 RPSAKEILEHL 215 (215)
T ss_pred CcCHHHHhhCC
Confidence 99999998753
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-29 Score=211.33 Aligned_cols=234 Identities=19% Similarity=0.224 Sum_probs=180.0
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHHhcCC-CCCccceEeEEEeCC--ceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNLR-SERLANLIGCCYEAD--ERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~--~~~lv~e~~~~~~L~~~i 76 (423)
|-++.||.+... +..+.+|++...+ .+.+.+|+++|..|. ||||+.++++..+.. ...+|+||+.+.+.....
T Consensus 49 GKYSEVFeg~~~~~~eK~ViKiLKPVk--kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly 126 (338)
T KOG0668|consen 49 GKYSEVFEGINITNNEKCVIKILKPVK--KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFEYVNNTDFKQLY 126 (338)
T ss_pred ccHhhHhcccccCCCceEEEeeechHH--HHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhhhhccccHHHHh
Confidence 668889999864 5556666665554 557889999999995 999999999998764 467999999998877665
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCC-CeEEccccccccCCCCCcc---ccCcccCC
Q 014484 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG-NPRLSSFGLMKNSRDGKSY---STNLAFTP 152 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~-~~kl~Dfg~~~~~~~~~~~---~~t~~y~a 152 (423)
..++...+...+.+++.||.|||+.| |.|||+||.|+++|... .++|+|+|++....++... ..+..|--
T Consensus 127 -----~tl~d~dIryY~~elLkALdyCHS~G-ImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eYnVRVASRyfKG 200 (338)
T KOG0668|consen 127 -----PTLTDYDIRYYIYELLKALDYCHSMG-IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 200 (338)
T ss_pred -----hhhchhhHHHHHHHHHHHHhHHHhcC-cccccCCcceeeechhhceeeeeecchHhhcCCCceeeeeeehhhcCC
Confidence 35788899999999999999999999 99999999999998764 6999999999887776543 34677889
Q ss_pred ccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhH--H-h---------------------hhchhhhhccccccC
Q 014484 153 PEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALD--L-I---------------------RSKNFLLLMDSALEG 207 (423)
Q Consensus 153 PE~~~~~-~~~~~~Di~slG~~l~el~~g~~~~~~~~~~--~-~---------------------~~~~~~~~~~~~~~~ 207 (423)
||.+-.- .|+..-|+|||||++..|+..+.||...... . . ....+..++....+.
T Consensus 201 PELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk 280 (338)
T KOG0668|consen 201 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRK 280 (338)
T ss_pred chheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccc
Confidence 9988754 4888999999999999999999888642100 0 0 001111111111111
Q ss_pred CC--------ChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 208 HF--------SNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 208 ~~--------~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
.+ ..-.+++..+++.++|..|.++|+|+.|.+.|..
T Consensus 281 ~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~Hpy 324 (338)
T KOG0668|consen 281 PWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPY 324 (338)
T ss_pred cHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCch
Confidence 11 1123588999999999999999999999998843
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.7e-30 Score=244.65 Aligned_cols=233 Identities=16% Similarity=0.185 Sum_probs=189.7
Q ss_pred CCCCccceeeee--cceeeeeecCCCh-hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
|.+|.||++.+. +.-.++|+++-.. .+.....+|+-+++.++|||||.+++.+..++.+|++||||.||+|.+.-.
T Consensus 26 gTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEycgggslQdiy~- 104 (829)
T KOG0576|consen 26 GTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYCGGGSLQDIYH- 104 (829)
T ss_pred CcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEecCCCcccceee-
Confidence 789999999885 4445555553332 346677899999999999999999999999999999999999999998663
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCC----CCccccCcccCCcc
Q 014484 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNLAFTPPE 154 (423)
Q Consensus 79 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~~t~~y~aPE 154 (423)
..+++++.++..++++.+.|++|||+.| -+|||||-.||++++.|.+|+.|||.+-.+.. ..++.||+.|||||
T Consensus 105 -~TgplselqiayvcRetl~gl~ylhs~g-k~hRdiKGanilltd~gDvklaDfgvsaqitati~KrksfiGtpywmapE 182 (829)
T KOG0576|consen 105 -VTGPLSELQIAYVCRETLQGLKYLHSQG-KIHRDIKGANILLTDEGDVKLADFGVSAQITATIAKRKSFIGTPYWMAPE 182 (829)
T ss_pred -ecccchhHHHHHHHhhhhccchhhhcCC-cccccccccceeecccCceeecccCchhhhhhhhhhhhcccCCccccchh
Confidence 4678999999999999999999999999 99999999999999999999999998876653 35678999999999
Q ss_pred ccc---cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccC---CCChhHHHHHHHHHHHhcccC
Q 014484 155 YMR---TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEG---HFSNDEGTELVRLASRCLQSE 228 (423)
Q Consensus 155 ~~~---~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~d 228 (423)
+.. .+.|...+|||++|++..|+-.-++|.... ...+....+......+ .-+...++-+.+|++.||.++
T Consensus 183 vaaverkggynqlcdiwa~gitAiel~eLqpplfdl----hpmr~l~LmTkS~~qpp~lkDk~kws~~fh~fvK~altkn 258 (829)
T KOG0576|consen 183 VAAVERKGGYNQLCDIWALGITAIELGELQPPLFDL----HPMRALFLMTKSGFQPPTLKDKTKWSEFFHNFVKGALTKN 258 (829)
T ss_pred HHHHHhcccccccccccccccchhhhhhcCCccccc----chHHHHHHhhccCCCCCcccCCccchHHHHHHHHHHhcCC
Confidence 754 556999999999999999998877654332 2222222222222211 223456788999999999999
Q ss_pred cCCCCCHHHHHHH
Q 014484 229 ARERPNAKSLVIS 241 (423)
Q Consensus 229 p~~Rps~~~vl~~ 241 (423)
|++||+++.++.|
T Consensus 259 pKkRptaeklL~h 271 (829)
T KOG0576|consen 259 PKKRPTAEKLLQH 271 (829)
T ss_pred CccCCChhhheec
Confidence 9999999998876
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-29 Score=265.11 Aligned_cols=193 Identities=15% Similarity=0.149 Sum_probs=142.0
Q ss_pred cCCC-CCccceEeEE-------EeCCceeEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeec
Q 014484 41 NLRS-ERLANLIGCC-------YEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYH 112 (423)
Q Consensus 41 ~l~h-~niv~~~~~~-------~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~ 112 (423)
.++| +||++++++| .....+++++|++ +++|.+++.. ....+++.++..++.||+.||.|||++| |+||
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~g-IvHr 104 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDN-PDRSVDAFECFHVFRQIVEIVNAAHSQG-IVVH 104 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhc-ccccccHHHHHHHHHHHHHHHHHHHhCC-eeec
Confidence 4455 5788888887 3334567888888 5599999954 3456999999999999999999999999 9999
Q ss_pred cCCCCCeeecC-------------------CCCeEEccccccccCCCC--------------------CccccCcccCCc
Q 014484 113 DLNAYRILFDK-------------------DGNPRLSSFGLMKNSRDG--------------------KSYSTNLAFTPP 153 (423)
Q Consensus 113 dlkp~Nill~~-------------------~~~~kl~Dfg~~~~~~~~--------------------~~~~~t~~y~aP 153 (423)
||||+||||+. ++.+|++|||+++..... ....||+.||||
T Consensus 105 DlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 184 (793)
T PLN00181 105 NVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSP 184 (793)
T ss_pred cCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceECh
Confidence 99999999954 445677777776532110 013468889999
Q ss_pred cccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCC
Q 014484 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERP 233 (423)
Q Consensus 154 E~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 233 (423)
|++.+..++.++|||||||++|||++|.+|+...... .. .......+ ... ....+...+++.+||+.||.+||
T Consensus 185 E~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~-~~-~~~~~~~~----~~~-~~~~~~~~~~~~~~L~~~P~~Rp 257 (793)
T PLN00181 185 EEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRT-MS-SLRHRVLP----PQI-LLNWPKEASFCLWLLHPEPSCRP 257 (793)
T ss_pred hhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHH-HH-HHHHhhcC----hhh-hhcCHHHHHHHHHhCCCChhhCc
Confidence 9999999999999999999999999988665432111 00 00001111 111 11234567899999999999999
Q ss_pred CHHHHHHHHH
Q 014484 234 NAKSLVISLM 243 (423)
Q Consensus 234 s~~~vl~~l~ 243 (423)
|+.++++|..
T Consensus 258 s~~eil~h~~ 267 (793)
T PLN00181 258 SMSELLQSEF 267 (793)
T ss_pred ChHHHhhchh
Confidence 9999998854
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.2e-28 Score=209.06 Aligned_cols=168 Identities=18% Similarity=0.122 Sum_probs=129.3
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCCccccCcc
Q 014484 70 ETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLA 149 (423)
Q Consensus 70 ~~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~t~~ 149 (423)
|||.+++.. .+..+++.+++.|+.|++.||.|||+++ ||+||+++.++.+++ ||+++...... ..||+.
T Consensus 1 GsL~~~l~~-~~~~l~~~~~~~i~~qi~~~L~~lH~~~-------kp~Nil~~~~~~~~~--fG~~~~~~~~~-~~g~~~ 69 (176)
T smart00750 1 VSLADILEV-RGRPLNEEEIWAVCLQCLRALRELHRQA-------KSGNILLTWDGLLKL--DGSVAFKTPEQ-SRVDPY 69 (176)
T ss_pred CcHHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHhcC-------CcccEeEcCccceee--ccceEeecccc-CCCccc
Confidence 689999964 3556999999999999999999999987 999999999999999 99987655433 367899
Q ss_pred cCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccC--CCChhHHH--HHHHHHHHhc
Q 014484 150 FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEG--HFSNDEGT--ELVRLASRCL 225 (423)
Q Consensus 150 y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~l~~li~~cl 225 (423)
|+|||++.+..++.++|||||||++|||+||..||............+.......... ..+...+. ++.+++.+||
T Consensus 70 y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl 149 (176)
T smart00750 70 FMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMRVCA 149 (176)
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHHHH
Confidence 9999999999999999999999999999999988754321111111111111111000 11223343 6999999999
Q ss_pred ccCcCCCCCHHHHHHHHHhhhhh
Q 014484 226 QSEARERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 226 ~~dp~~Rps~~~vl~~l~~~~~~ 248 (423)
..||.+||++.+++.++......
T Consensus 150 ~~~p~~Rp~~~~ll~~~~~~~~~ 172 (176)
T smart00750 150 SRLPQRREAANHYLAHCRALFAE 172 (176)
T ss_pred hcccccccCHHHHHHHHHHHHHH
Confidence 99999999999999999876543
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.4e-28 Score=223.10 Aligned_cols=120 Identities=14% Similarity=0.134 Sum_probs=105.3
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHHhcCC-----CC---CccceEeEEEe----CCceeEEEecC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNLR-----SE---RLANLIGCCYE----ADERLLVAEFM 67 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-----h~---niv~~~~~~~~----~~~~~lv~e~~ 67 (423)
|=|++||.+.+. .+.||.|+.....+-.+..+.||++|++++ |+ +||++++.|.. +.++|||+|++
T Consensus 89 GHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvL 168 (590)
T KOG1290|consen 89 GHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVL 168 (590)
T ss_pred cccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCCcEEEEEehhh
Confidence 668888888874 577899998888887888899999999993 33 49999999975 45689999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeec
Q 014484 68 PNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFD 122 (423)
Q Consensus 68 ~~~~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~ 122 (423)
|.+|-.+|+...-+.++...+..|+.||+.||.|||.+..|||-||||+|||+.
T Consensus 169 -GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 169 -GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLC 222 (590)
T ss_pred -hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeee
Confidence 779999999878888999999999999999999999986699999999999994
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=7e-28 Score=206.56 Aligned_cols=237 Identities=21% Similarity=0.232 Sum_probs=179.4
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHHhcC-CCCCccceEeE-EEeCCceeEEEecCCCCCHHhhhc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNL-RSERLANLIGC-CYEADERLLVAEFMPNETLAKHLF 77 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~-~~~~~~~~lv~e~~~~~~L~~~i~ 77 (423)
|.||.+-.+... ...+..|.+..+.....+|.+|..---.| .|.||+..|++ |...+..++++||++-|+|..-+.
T Consensus 35 G~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~aP~gdL~snv~ 114 (378)
T KOG1345|consen 35 GRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEFAPRGDLRSNVE 114 (378)
T ss_pred cceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeeccCccchhhhhcC
Confidence 778888777775 45677788888888899999999876666 58999988775 556666779999999999999883
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeee-cCC-CCeEEccccccccCCCCCcc-ccCcccCCcc
Q 014484 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILF-DKD-GNPRLSSFGLMKNSRDGKSY-STNLAFTPPE 154 (423)
Q Consensus 78 ~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill-~~~-~~~kl~Dfg~~~~~~~~~~~-~~t~~y~aPE 154 (423)
...+.+.-..+++.|+++||.|+|+++ +||||||.+|||| +.+ -++||||||+.+..+..... .-+..|.+||
T Consensus 115 ---~~GigE~~~K~v~~ql~SAi~fMHskn-lVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV~~~~~~~~y~~pe 190 (378)
T KOG1345|consen 115 ---AAGIGEANTKKVFAQLLSAIEFMHSKN-LVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTVKYLEYVNNYHAPE 190 (378)
T ss_pred ---cccccHHHHHHHHHHHHHHHHHhhccc-hhhcccccceEEEecCCccEEEeeecccccccCceehhhhhhcccCCcH
Confidence 456889999999999999999999999 9999999999999 333 37999999998877655443 3467799999
Q ss_pred cccc---C--CCCCCcceehhHHHHHHHhhCCCCCCchhhHHhh---hchhhhhccccccCCCChhHHHHHHHHHHHhcc
Q 014484 155 YMRT---G--RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIR---SKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (423)
Q Consensus 155 ~~~~---~--~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (423)
.... + ...+.+|+|.||++++.++||..||......... ...+...........+ ...++.+..+.++-|.
T Consensus 191 ~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~F-~~fs~~a~r~Fkk~lt 269 (378)
T KOG1345|consen 191 LCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPKKF-NPFSEKALRLFKKSLT 269 (378)
T ss_pred HHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCchhh-cccCHHHHHHHHHhcC
Confidence 6542 2 3678999999999999999999887643222222 1222222222222222 2356779999999999
Q ss_pred cCcCCC---CCHHHHHHHHH
Q 014484 227 SEARER---PNAKSLVISLM 243 (423)
Q Consensus 227 ~dp~~R---ps~~~vl~~l~ 243 (423)
.+|++| .+++.....++
T Consensus 270 ~~~~drcki~~~kk~rk~~w 289 (378)
T KOG1345|consen 270 PRFKDRCKIWTAKKMRKCLW 289 (378)
T ss_pred CcccccchhHHHHHHHHHHH
Confidence 999999 55555555443
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.5e-28 Score=227.79 Aligned_cols=181 Identities=12% Similarity=0.161 Sum_probs=153.6
Q ss_pred CCCCccceeeeecc--eeeeeecCCChhhHHH---------HHHHHHHHhcCC---CCCccceEeEEEeCCceeEEEecC
Q 014484 2 GGRCSKFSICWFHC--HLKSSVLESSDLGETL---------NLEEAKAVGNLR---SERLANLIGCCYEADERLLVAEFM 67 (423)
Q Consensus 2 G~~g~v~~~~~~~~--~~~~~~~~~~~~~~~~---------~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e~~ 67 (423)
|+||.|..+++... .|.+|.+.+++.-.+. .-.||++|..|+ |+||++++++|++++..|++||-.
T Consensus 572 GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEddd~yyl~te~h 651 (772)
T KOG1152|consen 572 GAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDDDYYYLETEVH 651 (772)
T ss_pred cccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecCCeeEEEecCC
Confidence 88999999998633 3344444444433332 345999999996 999999999999999999999975
Q ss_pred -CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC--Ccc
Q 014484 68 -PNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSY 144 (423)
Q Consensus 68 -~~~~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--~~~ 144 (423)
+|-+|+++|.. +..+++.++..|++|++.|+++||+.| |||||||-+|+.++.+|.+||+|||.+....++ ..+
T Consensus 652 g~gIDLFd~IE~--kp~m~E~eAk~IFkQV~agi~hlh~~~-ivhrdikdenvivd~~g~~klidfgsaa~~ksgpfd~f 728 (772)
T KOG1152|consen 652 GEGIDLFDFIEF--KPRMDEPEAKLIFKQVVAGIKHLHDQG-IVHRDIKDENVIVDSNGFVKLIDFGSAAYTKSGPFDVF 728 (772)
T ss_pred CCCcchhhhhhc--cCccchHHHHHHHHHHHhccccccccC-ceecccccccEEEecCCeEEEeeccchhhhcCCCccee
Confidence 56799999964 667999999999999999999999999 999999999999999999999999998765544 568
Q ss_pred ccCcccCCccccccCCC-CCCcceehhHHHHHHHhhCCCCCC
Q 014484 145 STNLAFTPPEYMRTGRV-TPESVVYSFGTMLLDLLSGKHIPP 185 (423)
Q Consensus 145 ~~t~~y~aPE~~~~~~~-~~~~Di~slG~~l~el~~g~~~~~ 185 (423)
.||..|.|||++.|.+| +..-|||++|++||-++....|+.
T Consensus 729 ~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 729 VGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred eeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 89999999999999986 667899999999999987776653
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.5e-26 Score=204.84 Aligned_cols=183 Identities=21% Similarity=0.220 Sum_probs=159.7
Q ss_pred CCCCccceeeee--cceeeeeecCCChh--hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDL--GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~ 77 (423)
|++|.||++... +..+++|.+..... ....+.+|++.+..++|+|++++++++......++++|++++++|.+++.
T Consensus 10 g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~ 89 (225)
T smart00221 10 GAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEGGDLFDYLR 89 (225)
T ss_pred CCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCCCCHHHHHH
Confidence 789999999885 46777777765443 46788899999999999999999999999999999999999999999986
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-----CccccCcccCC
Q 014484 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYSTNLAFTP 152 (423)
Q Consensus 78 ~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~~t~~y~a 152 (423)
... ..+++..+..++.+++.++.+||+++ ++|+||+|.||+++.++.++|+|||++...... ....++..|++
T Consensus 90 ~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~~ 167 (225)
T smart00221 90 KKG-GKLSEEEARFYLRQILEALEYLHSLG-IVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLKTVKGTPFYLA 167 (225)
T ss_pred hcc-cCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccccceeccCCcCC
Confidence 422 12899999999999999999999999 999999999999999999999999998876554 34567788999
Q ss_pred cccc-ccCCCCCCcceehhHHHHHHHhhCCCCCCc
Q 014484 153 PEYM-RTGRVTPESVVYSFGTMLLDLLSGKHIPPS 186 (423)
Q Consensus 153 PE~~-~~~~~~~~~Di~slG~~l~el~~g~~~~~~ 186 (423)
||.+ ....++.++|+|+||+++++|++|..||..
T Consensus 168 pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 168 PEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred HhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 9998 666788899999999999999999988865
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.6e-25 Score=203.48 Aligned_cols=235 Identities=20% Similarity=0.237 Sum_probs=177.0
Q ss_pred CCCCCccceeeeec-----ceeeeeecCCChhhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 1 MGGRCSKFSICWFH-----CHLKSSVLESSDLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 1 ~G~~g~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
.|+|++||++.... ..++.|.+.... .......|+++|..+ .+.||+.+.+++..++...+|+||++..+..+
T Consensus 46 eGsFssv~~a~~~~~~~~~~~valk~i~~ts-~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivlp~~~H~~f~~ 124 (418)
T KOG1167|consen 46 EGSFSSVYKATDIEQDTKRRYVALKAIYRTS-SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVLPYFEHDRFRD 124 (418)
T ss_pred ccchhhhhhhhHhhhccccceEeeeeccccc-CchHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEecccCccCHHH
Confidence 38999999998753 445555543322 346788999999999 68999999999999999999999999999988
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCC-CCeEEccccccccCC--------------
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKD-GNPRLSSFGLMKNSR-------------- 139 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~-~~~kl~Dfg~~~~~~-------------- 139 (423)
+.. .++...+..+++.++.||.++|.+| ||||||||+|+|.+.. +.-.|+|||++....
T Consensus 125 l~~-----~l~~~~i~~Yl~~ll~Al~~~h~~G-IvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~ 198 (418)
T KOG1167|consen 125 LYR-----SLSLAEIRWYLRNLLKALAHLHKNG-IVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQTEHSRSYSGR 198 (418)
T ss_pred HHh-----cCCHHHHHHHHHHHHHHhhhhhccC-ccccCCCccccccccccCCceEEechhHHHHHhhhhhhhhhhhhcc
Confidence 884 3778999999999999999999999 9999999999999754 567899999986110
Q ss_pred ---C-------------------------------CCccccCcccCCcccccc-CCCCCCcceehhHHHHHHHhhCCCCC
Q 014484 140 ---D-------------------------------GKSYSTNLAFTPPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIP 184 (423)
Q Consensus 140 ---~-------------------------------~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~g~~~~ 184 (423)
. .....||++|.|||++.. ...+++.||||.|+++.-++++..||
T Consensus 199 ~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PF 278 (418)
T KOG1167|consen 199 HATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPF 278 (418)
T ss_pred cCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccceeehhhcccccc
Confidence 0 001236899999998764 45788999999999999999999887
Q ss_pred CchhhH--------------Hhh------hc-----------------hhhhh-ccccc--------cCCCChhHHHHHH
Q 014484 185 PSHALD--------------LIR------SK-----------------NFLLL-MDSAL--------EGHFSNDEGTELV 218 (423)
Q Consensus 185 ~~~~~~--------------~~~------~~-----------------~~~~~-~~~~~--------~~~~~~~~~~~l~ 218 (423)
.....+ .+. +. .+... ..... ........+..+.
T Consensus 279 f~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~ 358 (418)
T KOG1167|consen 279 FKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLL 358 (418)
T ss_pred ccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeeccccccccHHHH
Confidence 532100 000 00 00000 00000 0011112345789
Q ss_pred HHHHHhcccCcCCCCCHHHHHHHH
Q 014484 219 RLASRCLQSEARERPNAKSLVISL 242 (423)
Q Consensus 219 ~li~~cl~~dp~~Rps~~~vl~~l 242 (423)
+++.+||..||.+|.|+++.|+|.
T Consensus 359 dlLdk~le~np~kRitAEeALkHp 382 (418)
T KOG1167|consen 359 DLLDKCLELNPQKRITAEDALKHP 382 (418)
T ss_pred HHHHHHccCChhhcccHHHHhcCc
Confidence 999999999999999999999884
|
|
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.7e-24 Score=199.52 Aligned_cols=245 Identities=15% Similarity=0.126 Sum_probs=187.8
Q ss_pred CCCCccceeeeecc---eeeeeecCCChhh-HHHHHHHHHHHhcCCC----CCccceEeEE-EeCCceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICWFHC---HLKSSVLESSDLG-ETLNLEEAKAVGNLRS----ERLANLIGCC-YEADERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~~~~---~~~~~~~~~~~~~-~~~~~~E~~~l~~l~h----~niv~~~~~~-~~~~~~~lv~e~~~~~~L 72 (423)
|+||.||.+..... .+++|+....... ...+..|+.++..+.. ++++.+++.+ ..+...++||+.+ |.+|
T Consensus 29 G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~iVM~l~-G~sL 107 (322)
T KOG1164|consen 29 GGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFIVMSLL-GPSL 107 (322)
T ss_pred cCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEEEEecc-CccH
Confidence 89999999998643 4566655443222 2267789999999963 6899999999 5777889999999 8899
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCC-----CCeEEccccccc--cCCC-----
Q 014484 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKD-----GNPRLSSFGLMK--NSRD----- 140 (423)
Q Consensus 73 ~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~-----~~~kl~Dfg~~~--~~~~----- 140 (423)
.++......+.++..++.+++.|++.+|+++|+.| ++||||||+|++++.. ..+.|.|||+++ ....
T Consensus 108 ~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G-~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~ 186 (322)
T KOG1164|consen 108 EDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKG-FIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGN 186 (322)
T ss_pred HHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcC-cccCCcCHHHeeecCCCCcccceEEEEecCCCccccccCCCCcc
Confidence 99886555678999999999999999999999999 9999999999999765 358999999998 3110
Q ss_pred -------CCccccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhH
Q 014484 141 -------GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDE 213 (423)
Q Consensus 141 -------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (423)
.....||..|+++....+...+++.|+|||+.++.++..|..||....... ....+................
T Consensus 187 ~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 265 (322)
T KOG1164|consen 187 LRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTD-LKSKFEKDPRKLLTDRFGDLK 265 (322)
T ss_pred cccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccc-hHHHHHHHhhhhccccccCCC
Confidence 112458999999999999999999999999999999999997775432111 111111111111111122334
Q ss_pred HHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhhhc
Q 014484 214 GTELVRLASRCLQSEARERPNAKSLVISLMSLQKEA 249 (423)
Q Consensus 214 ~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~~~~~ 249 (423)
+.++.++...+-..+...+|....+...+.......
T Consensus 266 ~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~ 301 (322)
T KOG1164|consen 266 PEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDSE 301 (322)
T ss_pred hHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHhc
Confidence 677888888888899999999999999988776553
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.6e-25 Score=189.45 Aligned_cols=238 Identities=16% Similarity=0.220 Sum_probs=193.8
Q ss_pred CCccceeeeecceeeeeecCCCh---hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccCC
Q 014484 4 RCSKFSICWFHCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80 (423)
Q Consensus 4 ~g~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~ 80 (423)
.|..|++.|.+.++..+++...+ ....+|..|.-.|+-+.||||+.+++.|.....+.+|..|++.|+|...+.+..
T Consensus 203 sgelwrgrwqgndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gslynvlhe~t 282 (448)
T KOG0195|consen 203 SGELWRGRWQGNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGSLYNVLHEQT 282 (448)
T ss_pred CcccccccccCcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchHHHHHHhcCc
Confidence 58889999998888888775543 234578899999999999999999999999999999999999999999997666
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeec-cCCCCCeeecCCCCeEEccccccccCCCCCccccCcccCCccccccC
Q 014484 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYMRTG 159 (423)
Q Consensus 81 ~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~-dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~t~~y~aPE~~~~~ 159 (423)
+-.++..++++++.++++|+.|||+..+++-| -|.+..+++|++.+++|+ .+-.+.+.+.....-.+.||+||.++..
T Consensus 283 ~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltaris-mad~kfsfqe~gr~y~pawmspealqrk 361 (448)
T KOG0195|consen 283 SVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARIS-MADTKFSFQEVGRAYSPAWMSPEALQRK 361 (448)
T ss_pred cEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhhee-cccceeeeeccccccCcccCCHHHHhcC
Confidence 66688889999999999999999998776666 789999999999877764 2222333333444557899999999876
Q ss_pred CC---CCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCCHH
Q 014484 160 RV---TPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAK 236 (423)
Q Consensus 160 ~~---~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ 236 (423)
+- -..+|+|||.+++||+.|...||.... ..+--.++.-..++..+|+..+..+..++.-|+..||.+||.+.
T Consensus 362 ped~n~raadmwsfaillwel~trevpfadls----pmecgmkialeglrv~ippgis~hm~klm~icmnedpgkrpkfd 437 (448)
T KOG0195|consen 362 PEDLNIRAADMWSFAILLWELNTREVPFADLS----PMECGMKIALEGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFD 437 (448)
T ss_pred chhcchhhhhHHHHHHHHHHhhccccccccCC----chhhhhhhhhccccccCCCCccHHHHHHHHHHhcCCCCcCCCcc
Confidence 53 347999999999999999999987642 22223344445667778888899999999999999999999999
Q ss_pred HHHHHHHhhh
Q 014484 237 SLVISLMSLQ 246 (423)
Q Consensus 237 ~vl~~l~~~~ 246 (423)
.++-.|+++.
T Consensus 438 mivpilekm~ 447 (448)
T KOG0195|consen 438 MIVPILEKMI 447 (448)
T ss_pred eehhhHHHhc
Confidence 9998887653
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.6e-23 Score=184.71 Aligned_cols=253 Identities=13% Similarity=0.099 Sum_probs=200.8
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
|+||..|.+... +..|++|.-+.. .....+..|.+..+.| ..++|+.++-+...+.+..||||++ |.||+++. +
T Consensus 39 GsFG~lf~G~Nl~nne~VAIKfEPrk-S~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL-GPSLEDLF-D 115 (449)
T KOG1165|consen 39 GSFGVLFLGKNLYNNEPVAIKFEPRK-SEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL-GPSLEDLF-D 115 (449)
T ss_pred CcceeeecccccccCceEEEEecccc-CCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh-CcCHHHHH-H
Confidence 899999999874 788888864433 3445677888988888 5799999999999999999999999 88999876 5
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCC-----CeEEccccccccCCCC-----------C
Q 014484 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG-----NPRLSSFGLMKNSRDG-----------K 142 (423)
Q Consensus 79 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~-----~~kl~Dfg~~~~~~~~-----------~ 142 (423)
..++.|+..+++.++.|++.-++++|++. +|.|||||+|+||...+ .+.++|||+++...+. .
T Consensus 116 ~CgR~FSvKTV~miA~Qmi~rie~vH~k~-LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~K 194 (449)
T KOG1165|consen 116 LCGRRFSVKTVAMIAKQMITRIEYVHEKD-LIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQHIPYREHK 194 (449)
T ss_pred HhcCcccHHhHHHHHHHHHHHHHHHHhcc-eeecccCccceeecCCCCCCCceEEEEeccchhhhcCccccccCcccccc
Confidence 67889999999999999999999999999 99999999999997654 4899999999876543 4
Q ss_pred ccccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccc---cCCCChhHHHHHHH
Q 014484 143 SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSAL---EGHFSNDEGTELVR 219 (423)
Q Consensus 143 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~ 219 (423)
+..||.+||+-....|...+.+.|+-|||.++++.+.|..||.+.... ..++...++-+... ...+....|.++..
T Consensus 195 SLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~-tnK~kYeKIGe~Kr~T~i~~Lc~g~P~efa~ 273 (449)
T KOG1165|consen 195 SLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAD-TNKEKYEKIGETKRSTPIEVLCEGFPEEFAT 273 (449)
T ss_pred ccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCc-chHHHHHHhccccccCCHHHHHhcCHHHHHH
Confidence 557899999999999999999999999999999999999888764322 22233333322221 11233446788999
Q ss_pred HHHHhcccCcCCCCCHHHHHHHHHhhhhhccCChhhhhcC
Q 014484 220 LASRCLQSEARERPNAKSLVISLMSLQKEAEVPSYVLLGI 259 (423)
Q Consensus 220 li~~cl~~dp~~Rps~~~vl~~l~~~~~~~~~~~~~~~~~ 259 (423)
.+...-..+-.+-|..+-+...+..+......-..-.++|
T Consensus 274 Yl~yvR~L~F~E~PDYdylr~Lf~dvldr~g~t~Dg~yDW 313 (449)
T KOG1165|consen 274 YLRYVRRLDFFETPDYDYLRKLFDDVLDRLGETDDGEYDW 313 (449)
T ss_pred HHHHHHhcCcccCCCHHHHHHHHHHHHHhcCCcccccccc
Confidence 9998889999999999999888877765544333333333
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=4e-23 Score=174.62 Aligned_cols=254 Identities=13% Similarity=0.103 Sum_probs=201.2
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHHhcCCC-CCccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNLRS-ERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
||||.+|.+... +..|++|+-.+. .....+..|.++...|++ ..|+++..++.+.....+||+++ |.||++...-
T Consensus 26 GSFGdIy~~~~i~~ge~VAiK~Es~~-a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdLL-GPsLEdLfnf 103 (341)
T KOG1163|consen 26 GSFGDIYLGISITSGEEVAIKLESSK-AKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDLL-GPSLEDLFNF 103 (341)
T ss_pred CchhheeeeeeccCCceEEEEeeccc-CCCcchhHHHHHHHHhccCCCCchhhhhccccccceeeeecc-CccHHHHHHH
Confidence 899999999884 788898874433 344567889999999965 77999999999999999999999 8899987753
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCC---CCeEEccccccccCCCC-----------Ccc
Q 014484 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKD---GNPRLSSFGLMKNSRDG-----------KSY 144 (423)
Q Consensus 79 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~---~~~kl~Dfg~~~~~~~~-----------~~~ 144 (423)
..+.++..+++-++-|++.-++|+|.++ +|||||||+|+|+.-+ ..+.++|||+++...+. ...
T Consensus 104 -C~R~ftmkTvLMLaDQml~RiEyvH~r~-fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~HIpyre~r~l 181 (341)
T KOG1163|consen 104 -CSRRFTMKTVLMLADQMLSRIEYVHLRN-FIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQHIPYREDRNL 181 (341)
T ss_pred -HhhhhhHHhHHHHHHHHHHHHHHHHhhc-cccccCCccceeeccccccceEEEEeccchhhhccccccccCccccCCcc
Confidence 4567999999999999999999999999 9999999999999643 35899999999866532 345
Q ss_pred ccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhcccccc---CCCChhHHHHHHHHH
Q 014484 145 STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALE---GHFSNDEGTELVRLA 221 (423)
Q Consensus 145 ~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li 221 (423)
.||.+|.+-....+...+.+.|+-|+|.++.++-.|..||.+-. .....++...+.+.... ..+....|.++.-.+
T Consensus 182 tGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglk-a~tk~QKyEkI~EkK~s~~ie~LC~G~P~EF~myl 260 (341)
T KOG1163|consen 182 TGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLK-AATKKQKYEKISEKKMSTPIEVLCKGFPAEFAMYL 260 (341)
T ss_pred ceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccc-hhhHHHHHHHHHHhhcCCCHHHHhCCCcHHHHHHH
Confidence 68999999888887788999999999999999999998887642 22333334443333322 223445688999999
Q ss_pred HHhcccCcCCCCCHHHHHHHHHhhhhhccCChhhhhcCC
Q 014484 222 SRCLQSEARERPNAKSLVISLMSLQKEAEVPSYVLLGIQ 260 (423)
Q Consensus 222 ~~cl~~dp~~Rps~~~vl~~l~~~~~~~~~~~~~~~~~~ 260 (423)
..|-..--++-|...-+.+.+..+-+..........+|.
T Consensus 261 ~Y~R~L~F~E~Pdy~ylrqlFriLfr~ln~~~d~iyDW~ 299 (341)
T KOG1163|consen 261 NYCRGLGFEEKPDYMYLRQLFRILFRTLNHQYDYIYDWT 299 (341)
T ss_pred HHHhhcCCCCCCcHHHHHHHHHHHHhhccccCCeEeeHH
Confidence 999999999999999988888777666554444444443
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.4e-23 Score=209.66 Aligned_cols=208 Identities=15% Similarity=0.087 Sum_probs=163.3
Q ss_pred HHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeee
Q 014484 32 NLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALY 111 (423)
Q Consensus 32 ~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH 111 (423)
+..|+-+-..|.|||++..+..+.+....+-+||||++ +|..++.+ ...+....+-.++.|++.|++|+|+.| +.|
T Consensus 368 i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE~~~~-Dlf~~~~~--~~~~~~~e~~c~fKqL~~Gv~y~h~~G-iah 443 (601)
T KOG0590|consen 368 ITSEFCIGSSLSHPNIIETLDIVQEIDGILQSMEYCPY-DLFSLVMS--NGKLTPLEADCFFKQLLRGVKYLHSMG-LAH 443 (601)
T ss_pred hhhheeecccccCCchhhhHHHHhhcccchhhhhcccH-HHHHHHhc--ccccchhhhhHHHHHHHHHHHHHHhcC-cee
Confidence 55677778888999998888888877776666999999 99999964 357899999999999999999999999 999
Q ss_pred ccCCCCCeeecCCCCeEEccccccccCCC--------CCccccCcccCCccccccCCCCC-CcceehhHHHHHHHhhCCC
Q 014484 112 HDLNAYRILFDKDGNPRLSSFGLMKNSRD--------GKSYSTNLAFTPPEYMRTGRVTP-ESVVYSFGTMLLDLLSGKH 182 (423)
Q Consensus 112 ~dlkp~Nill~~~~~~kl~Dfg~~~~~~~--------~~~~~~t~~y~aPE~~~~~~~~~-~~Di~slG~~l~el~~g~~ 182 (423)
||+|++|+++..+|.+|++|||.+....- .....|+-.|+|||.+.+..|++ ..||||.|+++..|++|+.
T Consensus 444 rdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~ 523 (601)
T KOG0590|consen 444 RDLKLENLLVTENGILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRF 523 (601)
T ss_pred ccCccccEEEecCCceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCC
Confidence 99999999999999999999998764432 23456889999999999988876 6899999999999999987
Q ss_pred CCCchhhHHhh---hchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 183 IPPSHALDLIR---SKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 183 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
||......... ...............+...++...+.+|.+||+.||.+|.|+++|++.-+
T Consensus 524 ~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W 587 (601)
T KOG0590|consen 524 PWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEW 587 (601)
T ss_pred ccccccccccchhhhccccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChH
Confidence 76543221110 00000000001111123356788999999999999999999999997643
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.4e-21 Score=181.54 Aligned_cols=238 Identities=21% Similarity=0.228 Sum_probs=182.1
Q ss_pred CCCCccceeeeecceeeeeecCCChh----hHHHHHHHHHHHhcCCCC-CccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWFHCHLKSSVLESSDL----GETLNLEEAKAVGNLRSE-RLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~~~~~~~~~~~~~~~----~~~~~~~E~~~l~~l~h~-niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
|+||.||.+.+. ..++++++..... ....+.+|+.++..+.|+ +|+.+.+++......+++++++.++++.+++
T Consensus 11 g~~~~v~~~~~~-~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 89 (384)
T COG0515 11 GSFGEVYLARDR-KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLL 89 (384)
T ss_pred CCCeEEEEEEec-cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecCCCCcHHHHH
Confidence 788888888876 4455555544333 356789999999999988 7999999997777789999999999999777
Q ss_pred ccCCC-CCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCC-CeEEccccccccCCCC----------Ccc
Q 014484 77 FHWET-QPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG-NPRLSSFGLMKNSRDG----------KSY 144 (423)
Q Consensus 77 ~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~-~~kl~Dfg~~~~~~~~----------~~~ 144 (423)
..... ..++......++.|++.++.++|+.+ ++|||+||+||+++..+ .++++|||.++..... ...
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~-~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~ 168 (384)
T COG0515 90 KKIGRKGPLSESEALFILAQILSALEYLHSKG-IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTS 168 (384)
T ss_pred HhcccccCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHeeecCCCCeEEEeccCcceecCCCCcccccccccccc
Confidence 43211 26899999999999999999999999 99999999999999988 6999999998744432 445
Q ss_pred ccCcccCCcccccc---CCCCCCcceehhHHHHHHHhhCCCCCCchhh---HHhhhchhhhhccccccCCCChh----HH
Q 014484 145 STNLAFTPPEYMRT---GRVTPESVVYSFGTMLLDLLSGKHIPPSHAL---DLIRSKNFLLLMDSALEGHFSND----EG 214 (423)
Q Consensus 145 ~~t~~y~aPE~~~~---~~~~~~~Di~slG~~l~el~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~----~~ 214 (423)
.++..|++||.+.+ ...+...|+||+|++++++++|..|+..... .......+.....+......... ..
T Consensus 169 ~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (384)
T COG0515 169 VGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNPELIS 248 (384)
T ss_pred ccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccccCccccchhh
Confidence 68999999999987 5788999999999999999999988655421 00111111111111011111111 13
Q ss_pred HHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014484 215 TELVRLASRCLQSEARERPNAKSLVIS 241 (423)
Q Consensus 215 ~~l~~li~~cl~~dp~~Rps~~~vl~~ 241 (423)
..+.+++.+|+..+|..|.+.......
T Consensus 249 ~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 249 KAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred HHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 578999999999999999998887765
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.3e-21 Score=183.70 Aligned_cols=153 Identities=15% Similarity=0.071 Sum_probs=115.7
Q ss_pred CCCCccceeeee---cceeeeeecCCC------hhhHHHHHHHHHHHhcCCCCCccc-eEeEEEeCCceeEEEecCCCCC
Q 014484 2 GGRCSKFSICWF---HCHLKSSVLESS------DLGETLNLEEAKAVGNLRSERLAN-LIGCCYEADERLLVAEFMPNET 71 (423)
Q Consensus 2 G~~g~v~~~~~~---~~~~~~~~~~~~------~~~~~~~~~E~~~l~~l~h~niv~-~~~~~~~~~~~~lv~e~~~~~~ 71 (423)
|+||.||++.+. +..+++|.+... ......+.+|+++|..++|+|++. ++++ +..++||||++|++
T Consensus 29 G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~----~~~~LVmE~~~G~~ 104 (365)
T PRK09188 29 DVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT----GKDGLVRGWTEGVP 104 (365)
T ss_pred cCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc----CCcEEEEEccCCCC
Confidence 899999999874 455567664322 223567899999999999999885 4432 45799999999999
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccC-CCCCeeecCCCCeEEccccccccCCCCC--------
Q 014484 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDL-NAYRILFDKDGNPRLSSFGLMKNSRDGK-------- 142 (423)
Q Consensus 72 L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dl-kp~Nill~~~~~~kl~Dfg~~~~~~~~~-------- 142 (423)
|.... . .. ...++.+++.+|.|||++| |+|||| ||+|||++.++.++|+|||+++......
T Consensus 105 L~~~~---~---~~---~~~~~~~i~~aL~~lH~~g-IiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~~~~~~~~~~~ 174 (365)
T PRK09188 105 LHLAR---P---HG---DPAWFRSAHRALRDLHRAG-ITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRRRGALYRIAAY 174 (365)
T ss_pred HHHhC---c---cc---hHHHHHHHHHHHHHHHHCC-CeeCCCCCcceEEEcCCCCEEEEECccceecccCcchhhhhhh
Confidence 97321 1 11 1467899999999999999 999999 9999999999999999999998655332
Q ss_pred ----ccccCcccCCccccccCC------CCCCccee
Q 014484 143 ----SYSTNLAFTPPEYMRTGR------VTPESVVY 168 (423)
Q Consensus 143 ----~~~~t~~y~aPE~~~~~~------~~~~~Di~ 168 (423)
...+++.|+|||.+.... .+..+|-|
T Consensus 175 ~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW 210 (365)
T PRK09188 175 EDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIW 210 (365)
T ss_pred hhhhhhhccCccCCcccCChhhhccccccccccCcE
Confidence 234577899999886332 33446666
|
|
| >KOG0553 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.2e-21 Score=168.84 Aligned_cols=106 Identities=22% Similarity=0.323 Sum_probs=103.2
Q ss_pred hHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHH
Q 014484 314 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQ 393 (423)
Q Consensus 314 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~ 393 (423)
....+..++.+|+.+.+.++|++|+..|++||+++|. ++.+|.|||.+|.++|.|+.|+++|+.||.+||.+.++|-++
T Consensus 77 ~~~~AE~LK~eGN~~m~~~~Y~eAv~kY~~AI~l~P~-nAVyycNRAAAy~~Lg~~~~AVkDce~Al~iDp~yskay~RL 155 (304)
T KOG0553|consen 77 DKALAESLKNEGNKLMKNKDYQEAVDKYTEAIELDPT-NAVYYCNRAAAYSKLGEYEDAVKDCESALSIDPHYSKAYGRL 155 (304)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCC-cchHHHHHHHHHHHhcchHHHHHHHHHHHhcChHHHHHHHHH
Confidence 4567889999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHHHHHHHHHhhcccccc
Q 014484 394 AACLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 394 g~~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
|.+|+.+|+|++|++.|++||+|||.+
T Consensus 156 G~A~~~~gk~~~A~~aykKaLeldP~N 182 (304)
T KOG0553|consen 156 GLAYLALGKYEEAIEAYKKALELDPDN 182 (304)
T ss_pred HHHHHccCcHHHHHHHHHhhhccCCCc
Confidence 999999999999999999999999985
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=5e-22 Score=189.77 Aligned_cols=217 Identities=18% Similarity=0.199 Sum_probs=175.2
Q ss_pred CCCCccceeeee-----cceeeeeecCCChhh---HHHHHHHHHHHhcCC-CCCccceEeEEEeCCceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICWF-----HCHLKSSVLESSDLG---ETLNLEEAKAVGNLR-SERLANLIGCCYEADERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~~-----~~~~~~~~~~~~~~~---~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~~~L 72 (423)
|+||.||...-. +.-++.++..+.... ......|..++..++ ||.+|++.-.+..+...++++++..||.|
T Consensus 5 g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rgg~l 84 (612)
T KOG0603|consen 5 GSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRGGDL 84 (612)
T ss_pred CCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcccchh
Confidence 778888876432 233444444332211 114456788888886 99999999999999999999999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCCccccCcccCC
Q 014484 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP 152 (423)
Q Consensus 73 ~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~t~~y~a 152 (423)
...+.+ ...+.+.....+..+++-+++++|+.+ ++|||+|++||+++.+|++++.|||+++..-.....+||..|||
T Consensus 85 ft~l~~--~~~f~~~~~~~~~aelaLald~lh~l~-iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~cgt~eymA 161 (612)
T KOG0603|consen 85 FTRLSK--EVMFDELDVAFYLAELALALDHLHKLG-IAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIACGTYEYRA 161 (612)
T ss_pred hhcccc--CCchHHHHHHHHHHHHHHHHhhcchhH-HHHhcccccceeecccCccccCCchhhhHhHhhhhcccchhhhh
Confidence 988853 445778888888999999999999999 99999999999999999999999999998777766699999999
Q ss_pred ccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCC
Q 014484 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (423)
Q Consensus 153 PE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (423)
||++. .....+|.||+|++.+||+||..||....... +. ......|...+....+++..++..+|.+|
T Consensus 162 pEI~~--gh~~a~D~ws~gvl~felltg~~pf~~~~~~~--------Il--~~~~~~p~~l~~~a~~~~~~l~~r~p~nr 229 (612)
T KOG0603|consen 162 PEIIN--GHLSAADWWSFGVLAFELLTGTLPFGGDTMKR--------IL--KAELEMPRELSAEARSLFRQLFKRNPENR 229 (612)
T ss_pred hHhhh--ccCCcccchhhhhhHHHHhhCCCCCchHHHHH--------Hh--hhccCCchhhhHHHHHHHHHHHhhCHHHH
Confidence 99998 66778999999999999999998887621111 11 11224567788899999999999999999
Q ss_pred C
Q 014484 233 P 233 (423)
Q Consensus 233 p 233 (423)
-
T Consensus 230 L 230 (612)
T KOG0603|consen 230 L 230 (612)
T ss_pred h
Confidence 4
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.9e-21 Score=162.34 Aligned_cols=172 Identities=16% Similarity=0.108 Sum_probs=131.3
Q ss_pred CCCCccceeeeecceeeeeecCCChhhHH-----HHHHHHHHHhcCC-CCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWFHCHLKSSVLESSDLGET-----LNLEEAKAVGNLR-SERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~~~~~~~~~~~~~~~~~~-----~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+...+..+....+........ .+.+|+++|.+|. |+++++++++ +..+++|||+.|.+|.+.
T Consensus 13 ~~f~~v~~~~~~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI~G~~L~~~ 88 (218)
T PRK12274 13 DTFGRILLVRGGERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYLAGAAMYQR 88 (218)
T ss_pred CCcceEEEeecCCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeeecCccHHhh
Confidence 78999997666566666566655554333 5789999999995 5889999886 346999999999999765
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccC-CCCCeeecCCCCeEEccccccccCCCCCcc----------
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDL-NAYRILFDKDGNPRLSSFGLMKNSRDGKSY---------- 144 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dl-kp~Nill~~~~~~kl~Dfg~~~~~~~~~~~---------- 144 (423)
+.. ....++.|++.+|.++|++| |+|||| ||+|||++.+|.++|+|||++.........
T Consensus 89 ~~~---------~~~~~~~qi~~~L~~lH~~G-IvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~ 158 (218)
T PRK12274 89 PPR---------GDLAYFRAARRLLQQLHRCG-VAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRLLAREDLR 158 (218)
T ss_pred hhh---------hhHHHHHHHHHHHHHHHHCc-CccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHHHHHHHHH
Confidence 411 11357889999999999999 999999 799999999999999999999865544321
Q ss_pred -------ccCcccCCccccccC-CCC-CCcceehhHHHHHHHhhCCCCCCch
Q 014484 145 -------STNLAFTPPEYMRTG-RVT-PESVVYSFGTMLLDLLSGKHIPPSH 187 (423)
Q Consensus 145 -------~~t~~y~aPE~~~~~-~~~-~~~Di~slG~~l~el~~g~~~~~~~ 187 (423)
..++.|++|+...-. ..+ ...++++.|+-+|.++|+..+..++
T Consensus 159 ~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~ 210 (218)
T PRK12274 159 HLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWED 210 (218)
T ss_pred HHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcccc
Confidence 135677777754322 223 4678889999999999999776543
|
|
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.8e-21 Score=168.76 Aligned_cols=157 Identities=14% Similarity=0.052 Sum_probs=121.5
Q ss_pred CCCCccceeeeecceeeeeecCCChhhHH----H------HHHHHHHHhcCCCCCccceEeEEEeC--------CceeEE
Q 014484 2 GGRCSKFSICWFHCHLKSSVLESSDLGET----L------NLEEAKAVGNLRSERLANLIGCCYEA--------DERLLV 63 (423)
Q Consensus 2 G~~g~v~~~~~~~~~~~~~~~~~~~~~~~----~------~~~E~~~l~~l~h~niv~~~~~~~~~--------~~~~lv 63 (423)
||||.||.....+..+++|++.......+ . +.+|+..+.++.|++|..+.+++... +..++|
T Consensus 42 ~~f~~v~l~~~~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~~~~~~~~~~lv 121 (232)
T PRK10359 42 IDDTKVSLIDTDYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAERKTLRYAHTYIML 121 (232)
T ss_pred CCceEEEEEecCCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecccccccccCCeEEE
Confidence 89999999777677788888865433222 2 57899999999999999999986643 347899
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCCc
Q 014484 64 AEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS 143 (423)
Q Consensus 64 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 143 (423)
|||++|.+|.++. .++. ....+++.+|..+|+.| ++|||++|+||+++.+| ++|+|||..........
T Consensus 122 mEyi~G~tL~~~~------~~~~----~~~~~i~~~l~~lH~~g-i~H~Dikp~Nili~~~g-i~liDfg~~~~~~e~~a 189 (232)
T PRK10359 122 IEYIEGVELNDMP------EISE----DVKAKIKASIESLHQHG-MVSGDPHKGNFIVSKNG-LRIIDLSGKRCTAQRKA 189 (232)
T ss_pred EEEECCccHHHhh------hccH----HHHHHHHHHHHHHHHcC-CccCCCChHHEEEeCCC-EEEEECCCcccccchhh
Confidence 9999999998874 1333 34669999999999999 99999999999999988 99999998765432211
Q ss_pred cccCcccCCccccccCCCCCCcceehhHHHHHHHh
Q 014484 144 YSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLL 178 (423)
Q Consensus 144 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~ 178 (423)
. ........++.++|+||||+++..+.
T Consensus 190 ~--------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 190 K--------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred H--------HHHHHHhHhcccccccceeEeehHHH
Confidence 1 11333445678999999999987654
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.84 E-value=6.2e-21 Score=172.32 Aligned_cols=191 Identities=14% Similarity=0.168 Sum_probs=146.3
Q ss_pred CCCCccceEeEEEeC---------------------------CceeEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHH
Q 014484 43 RSERLANLIGCCYEA---------------------------DERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALY 95 (423)
Q Consensus 43 ~h~niv~~~~~~~~~---------------------------~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~i~~q 95 (423)
.|||||++.++|.+. ..+|+||.-.+. +|.+++. .+..+.....-++.|
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~---~~~~s~r~~~~~laQ 349 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLW---TRHRSYRTGRVILAQ 349 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHh---cCCCchHHHHHHHHH
Confidence 699999999988653 347999999876 9999994 345777888899999
Q ss_pred HHHHHHHHHcCCCeeeccCCCCCeee--cCCC--CeEEccccccccCCC----------CCccccCcccCCccccccCC-
Q 014484 96 LAQALEYCSSKGRALYHDLNAYRILF--DKDG--NPRLSSFGLMKNSRD----------GKSYSTNLAFTPPEYMRTGR- 160 (423)
Q Consensus 96 i~~~l~~lH~~~~iiH~dlkp~Nill--~~~~--~~kl~Dfg~~~~~~~----------~~~~~~t~~y~aPE~~~~~~- 160 (423)
+++|+.|||.+| |.|||+|++|||+ ++++ .+.|+|||.+--... .....|.-.-||||+....+
T Consensus 350 lLEav~hL~~hg-vAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PG 428 (598)
T KOG4158|consen 350 LLEAVTHLHKHG-VAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPG 428 (598)
T ss_pred HHHHHHHHHHcc-chhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCC
Confidence 999999999999 9999999999999 4454 478999997643222 12334677789999887432
Q ss_pred ----C-CCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCCH
Q 014484 161 ----V-TPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNA 235 (423)
Q Consensus 161 ----~-~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~ 235 (423)
. -.|+|.|+.|.+.||+++...||...+.-...... ......+..|..+++.+++++...|+.||++|+|.
T Consensus 429 p~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~----Yqe~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp 504 (598)
T KOG4158|consen 429 PNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRT----YQESQLPALPSRVPPVARQLVFDLLKRDPSKRVSP 504 (598)
T ss_pred CceeeccchhhhhhhhhhHHHHhccCCcccccchheechhh----hhhhhCCCCcccCChHHHHHHHHHhcCCccccCCc
Confidence 2 23899999999999999999999875333222222 12233345667788999999999999999999887
Q ss_pred HHHHHHH
Q 014484 236 KSLVISL 242 (423)
Q Consensus 236 ~~vl~~l 242 (423)
.-..+.+
T Consensus 505 ~iAANvl 511 (598)
T KOG4158|consen 505 NIAANVL 511 (598)
T ss_pred cHHHhHH
Confidence 5544433
|
|
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.84 E-value=9.9e-21 Score=180.89 Aligned_cols=208 Identities=20% Similarity=0.305 Sum_probs=163.1
Q ss_pred HhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCe-eeccCCCC
Q 014484 39 VGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRA-LYHDLNAY 117 (423)
Q Consensus 39 l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i-iH~dlkp~ 117 (423)
|+.+.|.|+.+++|.+.++...++|.+||..|+|.+.+.. ....+++.....++++|+.||.|+|... | .|+.+++.
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~-~~~~~d~~F~~s~~rdi~~Gl~ylh~s~-i~~hg~l~s~ 78 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN-EDIKLDYFFILSFIRDISKGLAYLHNSP-IGYHGALKSS 78 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc-cccCccHHHHHHHHHHHHHHHHHHhcCc-ceeeeeeccc
Confidence 4678999999999999999999999999999999999965 4567889999999999999999999987 5 99999999
Q ss_pred CeeecCCCCeEEccccccccCCC------CCccccCcccCCccccccCC-------CCCCcceehhHHHHHHHhhCCCCC
Q 014484 118 RILFDKDGNPRLSSFGLMKNSRD------GKSYSTNLAFTPPEYMRTGR-------VTPESVVYSFGTMLLDLLSGKHIP 184 (423)
Q Consensus 118 Nill~~~~~~kl~Dfg~~~~~~~------~~~~~~t~~y~aPE~~~~~~-------~~~~~Di~slG~~l~el~~g~~~~ 184 (423)
|.+++....+||+|||+...... .........|.|||.+.+.. .+.+.|+||+|++++|+++...||
T Consensus 79 nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~ 158 (484)
T KOG1023|consen 79 NCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPF 158 (484)
T ss_pred cceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCcc
Confidence 99999999999999999766532 11122346799999988642 467899999999999999999998
Q ss_pred CchhhHHhhhchhhhhcc---ccccCCCC-h-hHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhhh
Q 014484 185 PSHALDLIRSKNFLLLMD---SALEGHFS-N-DEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~---~~~~~~~~-~-~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~~~~ 248 (423)
..........+.+..+.. ...++... . ..++++..++..||..+|..||+++.+...+..+...
T Consensus 159 ~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~ 227 (484)
T KOG1023|consen 159 DLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKG 227 (484)
T ss_pred ccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhccc
Confidence 764333222112222111 11222221 1 3455799999999999999999999998887765544
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.82 E-value=9.5e-21 Score=190.09 Aligned_cols=229 Identities=15% Similarity=0.114 Sum_probs=160.3
Q ss_pred CCccceeeeecceeeeeecCCCh--hhHHHH---HHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 4 RCSKFSICWFHCHLKSSVLESSD--LGETLN---LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 4 ~g~v~~~~~~~~~~~~~~~~~~~--~~~~~~---~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
|-.|+++....-.+.+|++.+.+ .....| ++|++ ...+++||++.+..+-+.+.-.|+|-+|+.. +|.+++.
T Consensus 36 FlKv~r~k~~eG~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRqyvkh-nLyDRlS- 112 (1431)
T KOG1240|consen 36 FLKVARAKDREGLVVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQYVKH-NLYDRLS- 112 (1431)
T ss_pred hhhhhhccCCCceEEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHHHHhh-hhhhhhc-
Confidence 45566666653336666665544 333334 44555 4555899999999998888888999999976 9999993
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----Cc-------cccC
Q 014484 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KS-------YSTN 147 (423)
Q Consensus 79 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~-------~~~t 147 (423)
...-+..-+..=|+.|++.||.-+|..| |+|||||.+|||++.-+.+.|+||...+..--. .. ....
T Consensus 113 -TRPFL~~iEKkWiaFQLL~al~qcH~~g-VcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRR 190 (1431)
T KOG1240|consen 113 -TRPFLVLIEKKWIAFQLLKALSQCHKLG-VCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPADFTFFFDTSRRR 190 (1431)
T ss_pred -cchHHHHHHHHHHHHHHHHHHHHHHHcC-ccccccccceEEEeeechhhhhcccccCCccCCCCCcccceEEEecCCce
Confidence 3334566677778999999999999999 999999999999999999999999876643211 11 1224
Q ss_pred cccCCccccccC----------C-CCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHH
Q 014484 148 LAFTPPEYMRTG----------R-VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTE 216 (423)
Q Consensus 148 ~~y~aPE~~~~~----------~-~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (423)
.+|.|||.+... . .+++-||||+||++.||++-+.|...-.+- ...+.............+. ...
T Consensus 191 tCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL-~aYr~~~~~~~e~~Le~Ie---d~~ 266 (1431)
T KOG1240|consen 191 TCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQL-LAYRSGNADDPEQLLEKIE---DVS 266 (1431)
T ss_pred eeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHH-HhHhccCccCHHHHHHhCc---Ccc
Confidence 579999977531 2 677899999999999998854444332111 1111100000000111111 236
Q ss_pred HHHHHHHhcccCcCCCCCHHHHHHH
Q 014484 217 LVRLASRCLQSEARERPNAKSLVIS 241 (423)
Q Consensus 217 l~~li~~cl~~dp~~Rps~~~vl~~ 241 (423)
++.+|..|++.||++|.|+++.|+.
T Consensus 267 ~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 267 LRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred HHHHHHHHHccCchhccCHHHHHHh
Confidence 8999999999999999999999977
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.80 E-value=9.2e-20 Score=157.46 Aligned_cols=133 Identities=15% Similarity=0.168 Sum_probs=103.0
Q ss_pred CCCCCccceeeee-cceeeeeecCCChhh---------------------------HHHHHHHHHHHhcCCCCCccceEe
Q 014484 1 MGGRCSKFSICWF-HCHLKSSVLESSDLG---------------------------ETLNLEEAKAVGNLRSERLANLIG 52 (423)
Q Consensus 1 ~G~~g~v~~~~~~-~~~~~~~~~~~~~~~---------------------------~~~~~~E~~~l~~l~h~niv~~~~ 52 (423)
-|+||.||.+... +..+++|++...... ......|++.+..+.++++.....
T Consensus 7 ~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v~~p~~ 86 (190)
T cd05147 7 TGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGIPCPEP 86 (190)
T ss_pred cccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCcE
Confidence 3899999999874 788899887544211 112235999999998887644333
Q ss_pred EEEeCCceeEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHH-HcCCCeeeccCCCCCeeecCCCCeEEcc
Q 014484 53 CCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYC-SSKGRALYHDLNAYRILFDKDGNPRLSS 131 (423)
Q Consensus 53 ~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~l-H~~~~iiH~dlkp~Nill~~~~~~kl~D 131 (423)
+.. ...++||||++|+++...+. ..+.++...+..++.|++.+|.++ |+.| |+||||||+||+++ ++.++|+|
T Consensus 87 ~~~--~~~~iVmE~i~g~~l~~~~~--~~~~~~~~~~~~i~~qi~~~L~~l~H~~g-iiHrDlkP~NIli~-~~~v~LiD 160 (190)
T cd05147 87 ILL--KSHVLVMEFIGDDGWAAPRL--KDAPLSESKARELYLQVIQIMRILYQDCR-LVHADLSEYNLLYH-DGKLYIID 160 (190)
T ss_pred EEe--cCCEEEEEEeCCCCCcchhh--hcCCCCHHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEE-CCcEEEEE
Confidence 322 22489999999987765432 245789999999999999999999 6889 99999999999998 57899999
Q ss_pred ccccccCC
Q 014484 132 FGLMKNSR 139 (423)
Q Consensus 132 fg~~~~~~ 139 (423)
||++....
T Consensus 161 FG~a~~~~ 168 (190)
T cd05147 161 VSQSVEHD 168 (190)
T ss_pred ccccccCC
Confidence 99987543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.9e-20 Score=174.44 Aligned_cols=200 Identities=20% Similarity=0.280 Sum_probs=141.1
Q ss_pred HHHHHHHHHHHhcCCCCCccceEe-------EEEe-----CCceeEEEecCCCCCHHhhhccC-CCCCCCHHHHHHHHHH
Q 014484 29 ETLNLEEAKAVGNLRSERLANLIG-------CCYE-----ADERLLVAEFMPNETLAKHLFHW-ETQPMKWAMRLRVALY 95 (423)
Q Consensus 29 ~~~~~~E~~~l~~l~h~niv~~~~-------~~~~-----~~~~~lv~e~~~~~~L~~~i~~~-~~~~~~~~~~~~i~~q 95 (423)
.....+++-.+....|-+..-+.+ .+.. ...+|+.|++|...+|.++|.++ ....-++.....++.|
T Consensus 288 ~~~~~r~~~~l~~~~~~~~s~~~d~~~s~~~~~~~~~v~~~~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q 367 (516)
T KOG1033|consen 288 CKYTFRQLGVLVDSSHSNRSILEDLRPSLFESSKRNKVGKKVYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQ 367 (516)
T ss_pred hhhhhhhhhheeccccCCcccccCCCCchhhhccccccccccchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHh
Confidence 344456666666665444333322 1111 22478999999999999999632 3345677889999999
Q ss_pred HHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----------CccccCcccCCccccccCCCCCCc
Q 014484 96 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----------KSYSTNLAFTPPEYMRTGRVTPES 165 (423)
Q Consensus 96 i~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----------~~~~~t~~y~aPE~~~~~~~~~~~ 165 (423)
+..|++| ++ .+|+|+||.||+...+..+||.|||+....... ....||..||+||++.+..|+.++
T Consensus 368 ~~~~~~y---k~-~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kv 443 (516)
T KOG1033|consen 368 IAPAVEY---KG-LIHRDLKPSNIFFSDDDQLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKV 443 (516)
T ss_pred hccchhh---cc-chhhhccccccccccchhhhhhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhc
Confidence 9999999 78 999999999999999999999999997755432 345789999999999999999999
Q ss_pred ceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHH
Q 014484 166 VVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239 (423)
Q Consensus 166 Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl 239 (423)
|||+||++|+|++.-. .... .....+..+.+..+.+.+..+ -++-..|+.+++.+.|.+||++.+.-
T Consensus 444 dIyaLGlil~EL~~~f---~T~~---er~~t~~d~r~g~ip~~~~~d-~p~e~~ll~~lls~~p~~RP~~~~~~ 510 (516)
T KOG1033|consen 444 DIYALGLILAELLIQF---STQF---ERIATLTDIRDGIIPPEFLQD-YPEEYTLLQQLLSPSPEERPSAIEVA 510 (516)
T ss_pred chhhHHHHHHHHHHHh---ccHH---HHHHhhhhhhcCCCChHHhhc-CcHHHHHHHHhcCCCcccCchHHHHh
Confidence 9999999999998732 1110 111111122222221111111 13357899999999999999665543
|
|
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.4e-19 Score=153.23 Aligned_cols=133 Identities=15% Similarity=0.178 Sum_probs=105.1
Q ss_pred CCCCccceeeee-cceeeeeecCCChhh---------------------------HHHHHHHHHHHhcCCCCCccceEeE
Q 014484 2 GGRCSKFSICWF-HCHLKSSVLESSDLG---------------------------ETLNLEEAKAVGNLRSERLANLIGC 53 (423)
Q Consensus 2 G~~g~v~~~~~~-~~~~~~~~~~~~~~~---------------------------~~~~~~E~~~l~~l~h~niv~~~~~ 53 (423)
|++|.||.+... +..+++|++...... ...+..|.+.+.++.|+++.....+
T Consensus 8 G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~ 87 (190)
T cd05145 8 GKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGVPVPEPI 87 (190)
T ss_pred CCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCCCCceEE
Confidence 899999999875 888888887654210 1234579999999999987554444
Q ss_pred EEeCCceeEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHc-CCCeeeccCCCCCeeecCCCCeEEccc
Q 014484 54 CYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSS-KGRALYHDLNAYRILFDKDGNPRLSSF 132 (423)
Q Consensus 54 ~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~~iiH~dlkp~Nill~~~~~~kl~Df 132 (423)
.... .++||||++|+++..... ....++......++.|++.++.++|+ +| |+||||||+||+++ ++.++|+||
T Consensus 88 ~~~~--~~lVmE~~~g~~~~~~~l--~~~~~~~~~~~~i~~~l~~~l~~lH~~~g-ivHrDlkP~NIll~-~~~~~liDF 161 (190)
T cd05145 88 LLKK--NVLVMEFIGDDGSPAPRL--KDVPLEEEEAEELYEQVVEQMRRLYQEAG-LVHGDLSEYNILYH-DGKPYIIDV 161 (190)
T ss_pred EecC--CEEEEEEecCCCchhhhh--hhccCCHHHHHHHHHHHHHHHHHHHHhCC-EecCCCChhhEEEE-CCCEEEEEc
Confidence 3332 489999999886544321 23467889999999999999999999 99 99999999999999 789999999
Q ss_pred cccccCCC
Q 014484 133 GLMKNSRD 140 (423)
Q Consensus 133 g~~~~~~~ 140 (423)
|++.....
T Consensus 162 G~a~~~~~ 169 (190)
T cd05145 162 SQAVELDH 169 (190)
T ss_pred ccceecCC
Confidence 99876553
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.6e-19 Score=162.47 Aligned_cols=219 Identities=18% Similarity=0.166 Sum_probs=137.3
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcCCC----------CCccceEeEEE---------e
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRS----------ERLANLIGCCY---------E 56 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h----------~niv~~~~~~~---------~ 56 (423)
|+++.||.+.+. +..++++++.... ...+.+.+|.-....+.+ -.++-.++... .
T Consensus 23 g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~~~~~~~~ 102 (288)
T PF14531_consen 23 GGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPGKPPFFER 102 (288)
T ss_dssp ETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETTS-SEEEE
T ss_pred CCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcCCCcceec
Confidence 789999999986 4777776663322 235566666655555432 12222223222 1
Q ss_pred CC--------ceeEEEecCCCCCHHhhhc---cCCCC--CCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecC
Q 014484 57 AD--------ERLLVAEFMPNETLAKHLF---HWETQ--PMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK 123 (423)
Q Consensus 57 ~~--------~~~lv~e~~~~~~L~~~i~---~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~ 123 (423)
.. ..+++|+-+.+ ||.+++. ..... .+.......+..|+++.+++||+.| ++|+||+|+|++++.
T Consensus 103 ~~~~~~~~v~n~~~l~P~~~~-dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~G-lVHgdi~~~nfll~~ 180 (288)
T PF14531_consen 103 GPGQSIYWVLNRFLLMPRAQG-DLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYG-LVHGDIKPENFLLDQ 180 (288)
T ss_dssp CETTEEEEEESEEEEEE--SE-EHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT-EEEST-SGGGEEE-T
T ss_pred CCCCccceeehhhhccchhhh-cHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcc-eEecccceeeEEEcC
Confidence 11 23678888855 8888764 11111 1223334566689999999999999 999999999999999
Q ss_pred CCCeEEccccccccCCCCCc-cccCcccCCcccccc--------CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhh
Q 014484 124 DGNPRLSSFGLMKNSRDGKS-YSTNLAFTPPEYMRT--------GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRS 194 (423)
Q Consensus 124 ~~~~kl~Dfg~~~~~~~~~~-~~~t~~y~aPE~~~~--------~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~ 194 (423)
+|.+.|+||+.....+.... ...+..|.+||.... -.++.+.|.|+||+++|.|.+|..||..........
T Consensus 181 ~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~ 260 (288)
T PF14531_consen 181 DGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPE 260 (288)
T ss_dssp TS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSG
T ss_pred CCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCCcccccc
Confidence 99999999998776665444 345677999996643 247889999999999999999998887542111111
Q ss_pred chhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCC
Q 014484 195 KNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (423)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (423)
. ...... +.|+.+..+|..+|++||.+|
T Consensus 261 ~---------~f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 261 W---------DFSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp G---------GGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred c---------cchhcC-CcCHHHHHHHHHHccCCcccC
Confidence 1 222334 788999999999999999987
|
|
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.5e-18 Score=151.35 Aligned_cols=126 Identities=15% Similarity=0.053 Sum_probs=96.0
Q ss_pred CCCCccceeeeecceeeeeecCCC-hhhHHHHHHHHHHHhcC-----CCCCccceEeEEEeCC---cee-EEEec--CCC
Q 014484 2 GGRCSKFSICWFHCHLKSSVLESS-DLGETLNLEEAKAVGNL-----RSERLANLIGCCYEAD---ERL-LVAEF--MPN 69 (423)
Q Consensus 2 G~~g~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~~---~~~-lv~e~--~~~ 69 (423)
|+||.||.....+.. .+|+.... ....+.+.+|++++..+ +||||++++++++++. ..+ +|||| +.+
T Consensus 13 G~~~~Vy~hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~e~~G~~~ 91 (210)
T PRK10345 13 GRHRKCYAHPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIADFDGKPS 91 (210)
T ss_pred CCceEEEECCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEecCCCCcc
Confidence 889999962222322 34444332 22456789999999999 5799999999999874 334 78999 667
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHH-HHHHcCCCeeeccCCCCCeeecCC----CCeEEccccc
Q 014484 70 ETLAKHLFHWETQPMKWAMRLRVALYLAQAL-EYCSSKGRALYHDLNAYRILFDKD----GNPRLSSFGL 134 (423)
Q Consensus 70 ~~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l-~~lH~~~~iiH~dlkp~Nill~~~----~~~kl~Dfg~ 134 (423)
++|.+++++ ..+++. ..++.+++.++ +|||+++ |+||||||+|||++.. +.++|+||+.
T Consensus 92 ~tL~~~l~~---~~~~e~--~~~~~~~L~~l~~yLh~~~-IvhrDlKp~NILl~~~~~~~~~~~LiDg~G 155 (210)
T PRK10345 92 ITLTEFAEQ---CRYEED--VAQLRQLLKKLKRYLLDNR-IVTMELKPQNILCQRISESEVIPVVCDNIG 155 (210)
T ss_pred hhHHHHHHc---ccccHh--HHHHHHHHHHHHHHHHHCC-EeecCCCHHHEEEeccCCCCCcEEEEECCC
Confidence 999999954 346665 46788888888 9999999 9999999999999743 3799999543
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.3e-17 Score=167.64 Aligned_cols=132 Identities=19% Similarity=0.174 Sum_probs=107.3
Q ss_pred HHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCC-------------------CCccccCcccCCccccc
Q 014484 97 AQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD-------------------GKSYSTNLAFTPPEYMR 157 (423)
Q Consensus 97 ~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~-------------------~~~~~~t~~y~aPE~~~ 157 (423)
+.+++|||+.| |+|||+||+|.+|..-|++|++|||+++...- ....+||+.|.|||++.
T Consensus 153 vla~Eylh~yg-ivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVil 231 (1205)
T KOG0606|consen 153 VLAVEYLHSYG-IVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVIL 231 (1205)
T ss_pred hHHhHhhccCC-eecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhh
Confidence 78999999999 99999999999999999999999999874321 12346899999999999
Q ss_pred cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCC
Q 014484 158 TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (423)
Q Consensus 158 ~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (423)
.+.|+...|+|++|+++||.+.|..||.+...+.....-+...+ ...+-....+++.+++|.++|+.+|..|
T Consensus 232 rqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i---~wpE~dea~p~Ea~dli~~LL~qnp~~R 303 (1205)
T KOG0606|consen 232 RQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDI---EWPEEDEALPPEAQDLIEQLLRQNPLCR 303 (1205)
T ss_pred hhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhc---cccccCcCCCHHHHHHHHHHHHhChHhh
Confidence 99999999999999999999999999998744333332222222 2222244567899999999999999999
|
|
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=6.1e-17 Score=143.10 Aligned_cols=128 Identities=14% Similarity=0.176 Sum_probs=107.6
Q ss_pred CCCCccceeeeecceeeeeecCCCh---------hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICWFHCHLKSSVLESSD---------LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~~~~~~~~~~~~~~~---------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 72 (423)
|++|.||.+.+.+..+.+|+..... .....+.+|+.++..+.|++|+....++......++||||++|++|
T Consensus 7 G~~~~vy~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~G~~L 86 (211)
T PRK14879 7 GAEAEIYLGDFLGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEYIEGEPL 86 (211)
T ss_pred CceEEEEEEeeCCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEEeCCcCH
Confidence 8999999999887777777644321 1134678899999999999988877787777888999999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEcccccccc
Q 014484 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKN 137 (423)
Q Consensus 73 ~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~ 137 (423)
.+++.. . .. ....++.+++.+|.++|+.+ ++|||++|.||+++ ++.++|+|||.+..
T Consensus 87 ~~~~~~--~---~~-~~~~i~~~i~~~l~~lH~~~-i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 87 KDLINS--N---GM-EELELSREIGRLVGKLHSAG-IIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred HHHHHh--c---cH-HHHHHHHHHHHHHHHHHhCC-cccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 999843 1 12 78899999999999999999 99999999999999 78899999998754
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.70 E-value=7.4e-17 Score=141.22 Aligned_cols=125 Identities=14% Similarity=0.170 Sum_probs=102.8
Q ss_pred CCCCccceeeeecceeeeeecCCCh---------hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICWFHCHLKSSVLESSD---------LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~~~~~~~~~~~~~~~---------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 72 (423)
|+||.||++.+.+..+.+|+..... .....+.+|++++..+.|+++.....++...+..++||||++|++|
T Consensus 5 G~~~~vy~~~~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~g~~l 84 (199)
T TIGR03724 5 GAEAIIYLGDFLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIEGKPL 84 (199)
T ss_pred CceEEEEEeecCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEECCccH
Confidence 8999999999888777777754321 1135677899999999988766666666667778999999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEcccccccc
Q 014484 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKN 137 (423)
Q Consensus 73 ~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~ 137 (423)
.+++.. ... .++.+++.+|.+||+.+ ++|||++|.||+++ ++.++++|||++..
T Consensus 85 ~~~~~~--~~~-------~~~~~i~~~l~~lH~~g-i~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 85 KDVIEE--GND-------ELLREIGRLVGKLHKAG-IVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred HHHHhh--cHH-------HHHHHHHHHHHHHHHCC-eecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 998742 111 78999999999999999 99999999999999 78999999998765
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >KOG0548 consensus Molecular co-chaperone STI1 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.69 E-value=9e-17 Score=150.54 Aligned_cols=103 Identities=23% Similarity=0.376 Sum_probs=99.4
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHH
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 397 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 397 (423)
+...+.+|+.+|+.|+|..|+..|++||+.+|+ ++.+|.|||.||.+++.+.+|++|++++|+++|++.++|++.|.++
T Consensus 358 A~e~r~kGne~Fk~gdy~~Av~~YteAIkr~P~-Da~lYsNRAac~~kL~~~~~aL~Da~~~ieL~p~~~kgy~RKg~al 436 (539)
T KOG0548|consen 358 AEEEREKGNEAFKKGDYPEAVKHYTEAIKRDPE-DARLYSNRAACYLKLGEYPEALKDAKKCIELDPNFIKAYLRKGAAL 436 (539)
T ss_pred HHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCc-hhHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Confidence 556677899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHhhccccccC
Q 014484 398 FSLGMENDARETLKDGTNLEAKKN 421 (423)
Q Consensus 398 ~~~~~~~~A~~~~~~al~l~~~~~ 421 (423)
..+.+|+.|++.|++++++||+..
T Consensus 437 ~~mk~ydkAleay~eale~dp~~~ 460 (539)
T KOG0548|consen 437 RAMKEYDKALEAYQEALELDPSNA 460 (539)
T ss_pred HHHHHHHHHHHHHHHHHhcCchhH
Confidence 999999999999999999999864
|
|
| >KOG0548 consensus Molecular co-chaperone STI1 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.68 E-value=9.3e-17 Score=150.45 Aligned_cols=103 Identities=27% Similarity=0.445 Sum_probs=99.7
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHH
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 397 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 397 (423)
+..++.+||.+|..|||+.|+..|++||.++|. +...|.||+.||..+|+|++|++|..++++++|+|+++|.++|.++
T Consensus 2 a~e~k~kgnaa~s~~d~~~ai~~~t~ai~l~p~-nhvlySnrsaa~a~~~~~~~al~da~k~~~l~p~w~kgy~r~Gaa~ 80 (539)
T KOG0548|consen 2 AVELKEKGNAAFSSGDFETAIRLFTEAIMLSPT-NHVLYSNRSAAYASLGSYEKALKDATKTRRLNPDWAKGYSRKGAAL 80 (539)
T ss_pred hhHHHHHHHhhcccccHHHHHHHHHHHHccCCC-ccchhcchHHHHHHHhhHHHHHHHHHHHHhcCCchhhHHHHhHHHH
Confidence 456789999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHhhccccccC
Q 014484 398 FSLGMENDARETLKDGTNLEAKKN 421 (423)
Q Consensus 398 ~~~~~~~~A~~~~~~al~l~~~~~ 421 (423)
..+|+|++|+..|.++|+.||++.
T Consensus 81 ~~lg~~~eA~~ay~~GL~~d~~n~ 104 (539)
T KOG0548|consen 81 FGLGDYEEAILAYSEGLEKDPSNK 104 (539)
T ss_pred HhcccHHHHHHHHHHHhhcCCchH
Confidence 999999999999999999999864
|
|
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.7e-16 Score=159.38 Aligned_cols=125 Identities=16% Similarity=0.156 Sum_probs=103.2
Q ss_pred CCCCccceeeeecceeeeeecCCC---------hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICWFHCHLKSSVLESS---------DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~~~~~~~~~~~~~~---------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 72 (423)
|+||.||++.+.+..+.+++.... ......+.+|++++..++|++++....++......++||||++|++|
T Consensus 344 G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~E~~~g~~L 423 (535)
T PRK09605 344 GAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKTIVMEYIGGKDL 423 (535)
T ss_pred CCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEEEEecCCCcH
Confidence 899999998886554433322111 11235688999999999999999888888887788999999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccC
Q 014484 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNS 138 (423)
Q Consensus 73 ~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 138 (423)
.+++. ....++.+++.+|.+||+.+ ++||||||+||++ .++.++|+|||+++..
T Consensus 424 ~~~l~----------~~~~~~~~i~~~L~~lH~~g-iiHrDlkp~NILl-~~~~~~liDFGla~~~ 477 (535)
T PRK09605 424 KDVLE----------GNPELVRKVGEIVAKLHKAG-IVHGDLTTSNFIV-RDDRLYLIDFGLGKYS 477 (535)
T ss_pred HHHHH----------HHHHHHHHHHHHHHHHHhCC-CccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence 99883 35688999999999999999 9999999999999 5778999999998653
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.2e-16 Score=140.06 Aligned_cols=131 Identities=14% Similarity=0.163 Sum_probs=100.9
Q ss_pred CCCCccceee-e--ecceeeeeecCCChh-------------------------hHHHHHHHHHHHhcCCCC--CccceE
Q 014484 2 GGRCSKFSIC-W--FHCHLKSSVLESSDL-------------------------GETLNLEEAKAVGNLRSE--RLANLI 51 (423)
Q Consensus 2 G~~g~v~~~~-~--~~~~~~~~~~~~~~~-------------------------~~~~~~~E~~~l~~l~h~--niv~~~ 51 (423)
|+||.||.+. . .+..+++|++..... ....+.+|+..+.++.+. .++.++
T Consensus 39 G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~~~i~~p~~~ 118 (237)
T smart00090 39 GKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYEAGVPVPKPI 118 (237)
T ss_pred CcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCeee
Confidence 8999999998 2 477888887754321 112356899999999753 344444
Q ss_pred eEEEeCCceeEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEcc
Q 014484 52 GCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSS 131 (423)
Q Consensus 52 ~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~D 131 (423)
++ . ..++||||+.|.+|..... ....+....+..++.|++.++.+||++|.++||||||+||+++ ++.++|+|
T Consensus 119 ~~---~-~~~lV~E~~~g~~L~~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~-~~~i~LiD 191 (237)
T smart00090 119 AW---R-RNVLVMEFIGGDGLPAPRL--KDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH-DGKVVIID 191 (237)
T ss_pred Ee---c-CceEEEEEecCCccccccc--ccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE-CCCEEEEE
Confidence 43 2 3589999999988876542 2345667778899999999999999997799999999999999 88999999
Q ss_pred ccccccCC
Q 014484 132 FGLMKNSR 139 (423)
Q Consensus 132 fg~~~~~~ 139 (423)
||.+....
T Consensus 192 Fg~a~~~~ 199 (237)
T smart00090 192 VSQSVELD 199 (237)
T ss_pred ChhhhccC
Confidence 99876543
|
|
| >KOG4234 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.67 E-value=5.6e-16 Score=127.55 Aligned_cols=111 Identities=17% Similarity=0.238 Sum_probs=102.7
Q ss_pred hhhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCC----cHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCc
Q 014484 311 WTSQMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMV----SPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW 386 (423)
Q Consensus 311 ~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~----~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~ 386 (423)
-.+...++..++..||.+|.+|+|++|...|+.||++-|.. ...+|.|+|.|+++++.++.|+.+|.+||+++|.+
T Consensus 88 k~k~~~kad~lK~EGN~~F~ngdyeeA~skY~~Ale~cp~~~~e~rsIly~Nraaa~iKl~k~e~aI~dcsKaiel~pty 167 (271)
T KOG4234|consen 88 KDKAIEKADSLKKEGNELFKNGDYEEANSKYQEALESCPSTSTEERSILYSNRAAALIKLRKWESAIEDCSKAIELNPTY 167 (271)
T ss_pred HHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHhCccccHHHHHHHHhhhHHHHHHhhhHHHHHHHHHhhHhcCchh
Confidence 33445677899999999999999999999999999999972 24789999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCChHHHHHHHHHhhccccccC
Q 014484 387 PTALYLQAACLFSLGMENDARETLKDGTNLEAKKN 421 (423)
Q Consensus 387 ~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 421 (423)
-+|+.++|.+|.++.+|++|+++|++.+++||+++
T Consensus 168 ~kAl~RRAeayek~ek~eealeDyKki~E~dPs~~ 202 (271)
T KOG4234|consen 168 EKALERRAEAYEKMEKYEEALEDYKKILESDPSRR 202 (271)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCcchH
Confidence 99999999999999999999999999999999864
|
|
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.5e-16 Score=162.75 Aligned_cols=230 Identities=14% Similarity=0.112 Sum_probs=164.2
Q ss_pred CCCCccceeeee-cceeeeeecCCChhhHHHHHHHHHHHhcCC---CCCccceEeEEEeCCceeEEEecCCCCCHHhhhc
Q 014484 2 GGRCSKFSICWF-HCHLKSSVLESSDLGETLNLEEAKAVGNLR---SERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (423)
Q Consensus 2 G~~g~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~ 77 (423)
||||.||.+... +..+++|+-...... +|--=.+++.+|+ -+-|.++.......+.-++|+||.+.|||-+++.
T Consensus 709 g~y~~vy~a~~~~~~~~alK~e~P~~~W--EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~ey~~~Gtlld~~N 786 (974)
T KOG1166|consen 709 GSYGSVYVATHSNGKLVALKVEKPPNPW--EFYICLQVMERLKPQMLPSIMHISSAHVFQNASVLVSEYSPYGTLLDLIN 786 (974)
T ss_pred ccceEEEEeecCCCcEEEEEeecCCCce--eeeehHHHHHhhchhhhcchHHHHHHHccCCcceeeeeccccccHHHhhc
Confidence 899999999875 666677765444322 2222233444443 2446666666666777899999999999999995
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecC-------CCCeEEccccccccCC---CCCc---c
Q 014484 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK-------DGNPRLSSFGLMKNSR---DGKS---Y 144 (423)
Q Consensus 78 ~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~-------~~~~kl~Dfg~~~~~~---~~~~---~ 144 (423)
..+.+++..+..++.|+++.++.||..+ ||||||||+|++|.. ...++|+|||.+..+. .+.. .
T Consensus 787 --~~~~m~e~lv~~~~~qml~ive~lH~~~-IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~lfp~~~~F~~~ 863 (974)
T KOG1166|consen 787 --TNKVMDEYLVMFFSCQMLRIVEHLHAMG-IIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKLFPDGTKFKAV 863 (974)
T ss_pred --cCCCCCchhhhHHHHHHHHHHHHHHhcc-eecccCCcceeEeecccCCCCcccceEEEecccceeeeEcCCCcEEeee
Confidence 5667999999999999999999999999 999999999999932 2358999999887543 3322 3
Q ss_pred ccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHH-HHHHHHHHH
Q 014484 145 STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEG-TELVRLASR 223 (423)
Q Consensus 145 ~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~ 223 (423)
.+|-.+-.+|...|.+++..+|.|.|+-+++-|+.|...-. ..+ ....+... ++.-.- .-+-+|+.+
T Consensus 864 ~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~q~------~~g--~~~~~~~~----~~Ry~~~~~W~~~F~~ 931 (974)
T KOG1166|consen 864 WHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYMEV------KNG--SSWMVKTN----FPRYWKRDMWNKFFDL 931 (974)
T ss_pred eccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHHHh------cCC--cceecccc----chhhhhHHHHHHHHHH
Confidence 45778999999999999999999999999999999973210 000 00111111 111111 235678888
Q ss_pred hcccCcCCCCCHHHHHHHHHhhhhh
Q 014484 224 CLQSEARERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 224 cl~~dp~~Rps~~~vl~~l~~~~~~ 248 (423)
+|..|-..=|...++...++.....
T Consensus 932 lLN~~~~~~p~l~~lr~~~~~~~~~ 956 (974)
T KOG1166|consen 932 LLNPDCDTLPNLQELRTELEEVLAE 956 (974)
T ss_pred HhCcCcccchhHHHHHHHHHHHHHH
Confidence 8884444448888888877765543
|
|
| >KOG4648 consensus Uncharacterized conserved protein, contains LRR repeats [Function unknown] | Back alignment and domain information |
|---|
Probab=99.65 E-value=9.1e-16 Score=136.15 Aligned_cols=106 Identities=25% Similarity=0.307 Sum_probs=101.7
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHH
Q 014484 315 MQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQA 394 (423)
Q Consensus 315 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g 394 (423)
...+.+++++||.+|++|.|++||.+|.++|..+|. ++..+.|||.+|+++++|..|..||+.|+.+|-.+.+||-++|
T Consensus 94 L~~~SEiKE~GN~yFKQgKy~EAIDCYs~~ia~~P~-NpV~~~NRA~AYlk~K~FA~AE~DC~~AiaLd~~Y~KAYSRR~ 172 (536)
T KOG4648|consen 94 LKKASEIKERGNTYFKQGKYEEAIDCYSTAIAVYPH-NPVYHINRALAYLKQKSFAQAEEDCEAAIALDKLYVKAYSRRM 172 (536)
T ss_pred HHhhHHHHHhhhhhhhccchhHHHHHhhhhhccCCC-CccchhhHHHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHHH
Confidence 355667999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHHHHHHHHHhhccccccC
Q 014484 395 ACLFSLGMENDARETLKDGTNLEAKKN 421 (423)
Q Consensus 395 ~~~~~~~~~~~A~~~~~~al~l~~~~~ 421 (423)
.+...+|+.+||.++++.+|+|+|+.+
T Consensus 173 ~AR~~Lg~~~EAKkD~E~vL~LEP~~~ 199 (536)
T KOG4648|consen 173 QARESLGNNMEAKKDCETVLALEPKNI 199 (536)
T ss_pred HHHHHHhhHHHHHHhHHHHHhhCcccH
Confidence 999999999999999999999999854
|
|
| >PRK15359 type III secretion system chaperone protein SscB; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.8e-15 Score=124.51 Aligned_cols=99 Identities=16% Similarity=0.208 Sum_probs=95.8
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHhC
Q 014484 321 SKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSL 400 (423)
Q Consensus 321 ~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~ 400 (423)
+...|..++..|+|++|+..|.+++..+|. +..+|.++|.++..+|++++|+..|++|++++|+++.+++++|.++..+
T Consensus 27 ~~~~g~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg~~~~~~g~~~~A~~~y~~Al~l~p~~~~a~~~lg~~l~~~ 105 (144)
T PRK15359 27 VYASGYASWQEGDYSRAVIDFSWLVMAQPW-SWRAHIALAGTWMMLKEYTTAINFYGHALMLDASHPEPVYQTGVCLKMM 105 (144)
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHc
Confidence 456799999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHhhcccccc
Q 014484 401 GMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 401 ~~~~~A~~~~~~al~l~~~~ 420 (423)
|++++|++.|++|++++|.+
T Consensus 106 g~~~eAi~~~~~Al~~~p~~ 125 (144)
T PRK15359 106 GEPGLAREAFQTAIKMSYAD 125 (144)
T ss_pred CCHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999875
|
|
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.9e-15 Score=135.35 Aligned_cols=128 Identities=20% Similarity=0.157 Sum_probs=99.5
Q ss_pred CCCCccceeeeecceeeeeecCCC--------------hhhHHHHHHHHHHHhcCCCCCc--cceEeEEEeCCc----ee
Q 014484 2 GGRCSKFSICWFHCHLKSSVLESS--------------DLGETLNLEEAKAVGNLRSERL--ANLIGCCYEADE----RL 61 (423)
Q Consensus 2 G~~g~v~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~E~~~l~~l~h~ni--v~~~~~~~~~~~----~~ 61 (423)
||.|+||.....+..+.++.+... ......+.+|++++..|.|++| +..+++...... .+
T Consensus 43 ~g~gtv~~v~~~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~~~~~~~ 122 (239)
T PRK01723 43 KGRGTTWFVQTPGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRHGLFYRAD 122 (239)
T ss_pred CCCccEEEEEeCCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeecCcceeee
Confidence 788899887776666766655321 1234567889999999988774 677776544332 25
Q ss_pred EEEecCCC-CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEcccccccc
Q 014484 62 LVAEFMPN-ETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKN 137 (423)
Q Consensus 62 lv~e~~~~-~~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~ 137 (423)
+|||+++| .+|.+++.. ..++.. .+.+++.+|.+||++| |+||||||.|||++.++.++|+|||.+..
T Consensus 123 lV~e~l~G~~~L~~~l~~---~~l~~~----~~~~i~~~l~~lH~~G-I~HrDlkp~NILv~~~~~v~LIDfg~~~~ 191 (239)
T PRK01723 123 ILIERIEGARDLVALLQE---APLSEE----QWQAIGQLIARFHDAG-VYHADLNAHNILLDPDGKFWLIDFDRGEL 191 (239)
T ss_pred EEEEecCCCCCHHHHHhc---CCCCHH----HHHHHHHHHHHHHHCC-CCCCCCCchhEEEcCCCCEEEEECCCccc
Confidence 99999997 699998843 345554 3678999999999999 99999999999999989999999998765
|
|
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.6e-15 Score=132.48 Aligned_cols=127 Identities=15% Similarity=0.134 Sum_probs=99.0
Q ss_pred CCCCCccceeeee-cceeeeeecCCCh-----------------------hhHHHHHHHHHHHhcCCCCC--ccceEeEE
Q 014484 1 MGGRCSKFSICWF-HCHLKSSVLESSD-----------------------LGETLNLEEAKAVGNLRSER--LANLIGCC 54 (423)
Q Consensus 1 ~G~~g~v~~~~~~-~~~~~~~~~~~~~-----------------------~~~~~~~~E~~~l~~l~h~n--iv~~~~~~ 54 (423)
.|+||.||.+.+. +..+++|++.... .....+.+|+.++..+.|++ ++..++.
T Consensus 25 ~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~v~~~~~~- 103 (198)
T cd05144 25 VGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFPVPKPIDW- 103 (198)
T ss_pred cCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCCCCceeec-
Confidence 3899999999884 7788888754322 01123677999999997774 5555442
Q ss_pred EeCCceeEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccc
Q 014484 55 YEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL 134 (423)
Q Consensus 55 ~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~ 134 (423)
...++||||++|++|..... ......++.+++.++.++|+.+ ++||||||+||+++.++.++|+|||.
T Consensus 104 ---~~~~lv~e~~~g~~L~~~~~--------~~~~~~~~~~i~~~l~~lh~~g-i~H~Dl~p~Nill~~~~~~~liDfg~ 171 (198)
T cd05144 104 ---NRHAVVMEYIDGVELYRVRV--------LEDPEEVLDEILEEIVKAYKHG-IIHGDLSEFNILVDDDEKIYIIDWPQ 171 (198)
T ss_pred ---CCceEEEEEeCCcchhhccc--------cccHHHHHHHHHHHHHHHHHCC-CCcCCCCcccEEEcCCCcEEEEECCc
Confidence 34589999999999977542 1345678899999999999999 99999999999999999999999999
Q ss_pred cccCCC
Q 014484 135 MKNSRD 140 (423)
Q Consensus 135 ~~~~~~ 140 (423)
+.....
T Consensus 172 ~~~~~~ 177 (198)
T cd05144 172 MVSTDH 177 (198)
T ss_pred cccCCC
Confidence 865543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >PLN03088 SGT1, suppressor of G2 allele of SKP1; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=4e-15 Score=141.07 Aligned_cols=101 Identities=26% Similarity=0.331 Sum_probs=97.8
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHH
Q 014484 319 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLF 398 (423)
Q Consensus 319 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~ 398 (423)
..++.+|+.+|..|+|++|+..|++||+++|. +..+|+++|.+|.++|++++|+.++++|+.++|+++.+|+++|.+|+
T Consensus 3 ~~l~~~a~~a~~~~~~~~Ai~~~~~Al~~~P~-~~~a~~~~a~~~~~~g~~~eAl~~~~~Al~l~P~~~~a~~~lg~~~~ 81 (356)
T PLN03088 3 KDLEDKAKEAFVDDDFALAVDLYTQAIDLDPN-NAELYADRAQANIKLGNFTEAVADANKAIELDPSLAKAYLRKGTACM 81 (356)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHH
Confidence 35778999999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred hCCChHHHHHHHHHhhcccccc
Q 014484 399 SLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 399 ~~~~~~~A~~~~~~al~l~~~~ 420 (423)
.+|+|++|+..|++|++++|.+
T Consensus 82 ~lg~~~eA~~~~~~al~l~P~~ 103 (356)
T PLN03088 82 KLEEYQTAKAALEKGASLAPGD 103 (356)
T ss_pred HhCCHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999875
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.1e-16 Score=160.21 Aligned_cols=243 Identities=16% Similarity=0.135 Sum_probs=177.1
Q ss_pred CCCCccceeeee---cceeeeeecCCChhh---HHHHHHHHHHHhcCC-CCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF---HCHLKSSVLESSDLG---ETLNLEEAKAVGNLR-SERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~---~~~~~~~~~~~~~~~---~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|+|+.|-..... ...++.+........ ......|..+-..+. |+|++++++........++++++..|+++.+
T Consensus 31 gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~~~s~g~~~f~ 110 (601)
T KOG0590|consen 31 GSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSLSYSDGGSLFS 110 (601)
T ss_pred cccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccccCccccccccc
Confidence 455555555542 233333333333222 223334777777776 9999999999999999999999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHH-cCCCeeeccCCCCCeeecCCC-CeEEccccccccCCC-C------Cccc
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCS-SKGRALYHDLNAYRILFDKDG-NPRLSSFGLMKNSRD-G------KSYS 145 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH-~~~~iiH~dlkp~Nill~~~~-~~kl~Dfg~~~~~~~-~------~~~~ 145 (423)
.+........+...+-..+.|+..++.|+| ..+ +.|+||||+|.+++..+ .+++.|||++..... . ....
T Consensus 111 ~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~-~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~g~~~~~~~~~ 189 (601)
T KOG0590|consen 111 KISHPDSTGTSSSSASRYLPQLNSGLSYLHPENG-VTHRDIKPSNSLLDESGSALKIADFGLATAYRNKNGAERSLKDRC 189 (601)
T ss_pred ccccCCccCCCCcchhhhhhhhccCccccCcccc-cccCCCCCccchhccCCCcccCCCchhhccccccCCcceeeeccc
Confidence 884323325777888899999999999999 888 99999999999999999 999999999986665 2 1235
Q ss_pred c-CcccCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHH
Q 014484 146 T-NLAFTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASR 223 (423)
Q Consensus 146 ~-t~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 223 (423)
| ++.|+|||...+. ...+..|+||.|+++.-+++|..|+............+.... ...........+....+++.+
T Consensus 190 g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~k 268 (601)
T KOG0590|consen 190 GSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNK-GRFTQLPWNSISDQAHDLLHK 268 (601)
T ss_pred CCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccc-cccccCccccCChhhhhcccc
Confidence 7 8999999999874 467789999999999999999988765432221111111111 011112233456778999999
Q ss_pred hcccCcCCCCCHHHHHHHHHhhh
Q 014484 224 CLQSEARERPNAKSLVISLMSLQ 246 (423)
Q Consensus 224 cl~~dp~~Rps~~~vl~~l~~~~ 246 (423)
++..+|..|.+.+++-..-+...
T Consensus 269 ~l~~~~~~r~s~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 269 ILKENPSNRLSIEELKLDNWLSS 291 (601)
T ss_pred cccCCchhccccccccccccccc
Confidence 99999999999999876544433
|
|
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.4e-15 Score=125.16 Aligned_cols=127 Identities=14% Similarity=0.031 Sum_probs=107.2
Q ss_pred CCCCccceeeeecceeeeeecCCChhhHHHHHHHHHHHhcCCC--CCccceEeEEEeCCceeEEEecCCCCCHHhhhccC
Q 014484 2 GGRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNLRS--ERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW 79 (423)
Q Consensus 2 G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~ 79 (423)
|+++.||.+...+..+.+|....... ...+.+|+.++..+.+ .++++++.++...+..+++|||+.|+++..+
T Consensus 9 g~~~~v~~~~~~~~~~~iK~~~~~~~-~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~~~---- 83 (155)
T cd05120 9 GLTNRVYLLGTKDEDYVLKINPSREK-GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETLDEV---- 83 (155)
T ss_pred ccccceEEEEecCCeEEEEecCCCCc-hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeecccC----
Confidence 78899999998777777777655543 5678899999999976 5899999999888889999999998777543
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHcC---CCeeeccCCCCCeeecCCCCeEEccccccccCC
Q 014484 80 ETQPMKWAMRLRVALYLAQALEYCSSK---GRALYHDLNAYRILFDKDGNPRLSSFGLMKNSR 139 (423)
Q Consensus 80 ~~~~~~~~~~~~i~~qi~~~l~~lH~~---~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 139 (423)
+......++.+++.++..+|.. + ++|+|++|.||++++.+.++++|||.+....
T Consensus 84 -----~~~~~~~~~~~~~~~l~~lh~~~~~~-i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~~ 140 (155)
T cd05120 84 -----SEEEKEDIAEQLAELLAKLHQLPLLV-LCHGDLHPGNILVDDGKILGIIDWEYAGYGP 140 (155)
T ss_pred -----CHHHHHHHHHHHHHHHHHHhCCCceE-EEecCCCcceEEEECCcEEEEEecccccCCC
Confidence 5566778899999999999984 6 9999999999999998899999999876543
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >KOG0543 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.60 E-value=4.6e-15 Score=135.70 Aligned_cols=109 Identities=19% Similarity=0.263 Sum_probs=99.6
Q ss_pred hhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCC--------------cHHHHhhHHHHHHhcCChHHHHHHHHH
Q 014484 313 SQMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMV--------------SPTVYARRCLSYLMNDMPQEALGDAMQ 378 (423)
Q Consensus 313 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~--------------~~~~~~~~~~~~~~~~~~~~A~~~~~~ 378 (423)
..+..+...+..|+.+|+.|+|..|...|++|+..-... -..++.|+|.||+++++|.+|+..|++
T Consensus 203 e~l~~A~~~ke~Gn~~fK~gk~~~A~~~Yerav~~l~~~~~~~~ee~~~~~~~k~~~~lNlA~c~lKl~~~~~Ai~~c~k 282 (397)
T KOG0543|consen 203 ERLEAADRKKERGNVLFKEGKFKLAKKRYERAVSFLEYRRSFDEEEQKKAEALKLACHLNLAACYLKLKEYKEAIESCNK 282 (397)
T ss_pred HHHHHHHHHHHhhhHHHhhchHHHHHHHHHHHHHHhhccccCCHHHHHHHHHHHHHHhhHHHHHHHhhhhHHHHHHHHHH
Confidence 456778899999999999999999999999998654320 137899999999999999999999999
Q ss_pred hHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHhhccccccC
Q 014484 379 AQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKKN 421 (423)
Q Consensus 379 a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 421 (423)
+|+++|+|.+|+|++|.|+..+|+|+.|+.+|++|++++|.++
T Consensus 283 vLe~~~~N~KALyRrG~A~l~~~e~~~A~~df~ka~k~~P~Nk 325 (397)
T KOG0543|consen 283 VLELDPNNVKALYRRGQALLALGEYDLARDDFQKALKLEPSNK 325 (397)
T ss_pred HHhcCCCchhHHHHHHHHHHhhccHHHHHHHHHHHHHhCCCcH
Confidence 9999999999999999999999999999999999999999874
|
|
| >PRK15363 pathogenicity island 2 chaperone protein SscA; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.2e-14 Score=117.49 Aligned_cols=100 Identities=16% Similarity=0.047 Sum_probs=95.4
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHH
Q 014484 317 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 396 (423)
Q Consensus 317 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~ 396 (423)
....+...|..++..|++++|...|+.+..++|. +...|+++|.|+..+|+|++|+..|.+|+.++|+++.++++.|.|
T Consensus 34 ~l~~lY~~A~~ly~~G~l~~A~~~f~~L~~~Dp~-~~~y~~gLG~~~Q~~g~~~~AI~aY~~A~~L~~ddp~~~~~ag~c 112 (157)
T PRK15363 34 PLNTLYRYAMQLMEVKEFAGAARLFQLLTIYDAW-SFDYWFRLGECCQAQKHWGEAIYAYGRAAQIKIDAPQAPWAAAEC 112 (157)
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHHHH
Confidence 3446778899999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhccc
Q 014484 397 LFSLGMENDARETLKDGTNLE 417 (423)
Q Consensus 397 ~~~~~~~~~A~~~~~~al~l~ 417 (423)
++.+|+.+.|++.|+.|+..-
T Consensus 113 ~L~lG~~~~A~~aF~~Ai~~~ 133 (157)
T PRK15363 113 YLACDNVCYAIKALKAVVRIC 133 (157)
T ss_pred HHHcCCHHHHHHHHHHHHHHh
Confidence 999999999999999999764
|
|
| >KOG0547 consensus Translocase of outer mitochondrial membrane complex, subunit TOM70/TOM72 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.1e-14 Score=134.80 Aligned_cols=97 Identities=26% Similarity=0.326 Sum_probs=93.0
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHH
Q 014484 315 MQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQA 394 (423)
Q Consensus 315 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g 394 (423)
...+..++.+||.+|++|+|++||++|++||++.|+ .+..|.||+.||..+|+|++.++++.+|++++|++.+|+++++
T Consensus 112 ~k~A~~lK~~GN~~f~~kkY~eAIkyY~~AI~l~p~-epiFYsNraAcY~~lgd~~~Vied~TkALEl~P~Y~KAl~RRA 190 (606)
T KOG0547|consen 112 LKYAAALKTKGNKFFRNKKYDEAIKYYTQAIELCPD-EPIFYSNRAACYESLGDWEKVIEDCTKALELNPDYVKALLRRA 190 (606)
T ss_pred HHHHHHHHhhhhhhhhcccHHHHHHHHHHHHhcCCC-CchhhhhHHHHHHHHhhHHHHHHHHHHHhhcCcHHHHHHHHHH
Confidence 456789999999999999999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHHHHHHHHH
Q 014484 395 ACLFSLGMENDARETLKD 412 (423)
Q Consensus 395 ~~~~~~~~~~~A~~~~~~ 412 (423)
.++..+|++++|+.+..-
T Consensus 191 ~A~E~lg~~~eal~D~tv 208 (606)
T KOG0547|consen 191 SAHEQLGKFDEALFDVTV 208 (606)
T ss_pred HHHHhhccHHHHHHhhhH
Confidence 999999999999988754
|
|
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.1e-14 Score=129.21 Aligned_cols=200 Identities=17% Similarity=0.217 Sum_probs=141.7
Q ss_pred HHHhcCCCCCccceEeEEEeCCc-----eeEEEecCCCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHcCCC-
Q 014484 37 KAVGNLRSERLANLIGCCYEADE-----RLLVAEFMPNETLAKHLFHW--ETQPMKWAMRLRVALYLAQALEYCSSKGR- 108 (423)
Q Consensus 37 ~~l~~l~h~niv~~~~~~~~~~~-----~~lv~e~~~~~~L~~~i~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~~- 108 (423)
.-|-++.|.|||+++.|+.+... ..+++||+..|+|..++++. .+..+....-.+|+-||+.||.|||+..|
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Pp 198 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPP 198 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCc
Confidence 34556689999999999976543 67999999999999999743 34567778888999999999999999865
Q ss_pred eeeccCCCCCeeecCCCCeEEcccccc--c----cCC--CCCccccCcccCCccccccCCCCCCcceehhHHHHHHHhhC
Q 014484 109 ALYHDLNAYRILFDKDGNPRLSSFGLM--K----NSR--DGKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSG 180 (423)
Q Consensus 109 iiH~dlkp~Nill~~~~~~kl~Dfg~~--~----~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g 180 (423)
++|+++.-.-|++..+|-+|+.--.-. . ... ......+-++|.+||.-..-+.+..+|||++|+...+|..+
T Consensus 199 iihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemail 278 (458)
T KOG1266|consen 199 IIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAIL 278 (458)
T ss_pred cccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHh
Confidence 999999999999999988877432110 0 000 11122346789999987766788899999999999999888
Q ss_pred CCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHh
Q 014484 181 KHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMS 244 (423)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~ 244 (423)
..-+................ ....- ...=++++.+|+.-.|..||++.+++.|...
T Consensus 279 Eiq~tnseS~~~~ee~ia~~----i~~le----n~lqr~~i~kcl~~eP~~rp~ar~llfHpll 334 (458)
T KOG1266|consen 279 EIQSTNSESKVEVEENIANV----IIGLE----NGLQRGSITKCLEGEPNGRPDARLLLFHPLL 334 (458)
T ss_pred eeccCCCcceeehhhhhhhh----eeecc----CccccCcCcccccCCCCCCcchhhhhcCcee
Confidence 74322211000011111100 00000 1113678899999999999999999988543
|
|
| >PRK11189 lipoprotein NlpI; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.9e-13 Score=125.62 Aligned_cols=103 Identities=11% Similarity=-0.047 Sum_probs=98.6
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHH
Q 014484 317 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 396 (423)
Q Consensus 317 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~ 396 (423)
.+..+..+|..+...|++++|+..|+++++++|+ ++.+|+++|.++...|++++|+..+++|++++|++..+|+++|.+
T Consensus 63 ~a~~~~~~g~~~~~~g~~~~A~~~~~~Al~l~P~-~~~a~~~lg~~~~~~g~~~~A~~~~~~Al~l~P~~~~a~~~lg~~ 141 (296)
T PRK11189 63 RAQLHYERGVLYDSLGLRALARNDFSQALALRPD-MADAYNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAYLNRGIA 141 (296)
T ss_pred hHHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 3456788999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhcccccc
Q 014484 397 LFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 397 ~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
++..|++++|++.|+++++++|..
T Consensus 142 l~~~g~~~eA~~~~~~al~~~P~~ 165 (296)
T PRK11189 142 LYYGGRYELAQDDLLAFYQDDPND 165 (296)
T ss_pred HHHCCCHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999864
|
|
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.50 E-value=4e-14 Score=122.53 Aligned_cols=130 Identities=13% Similarity=0.132 Sum_probs=91.6
Q ss_pred CCCCccceeeee-cceeeeeecCCChhh---HHH----------------------HHHHHHHHhcCCCCC--ccceEeE
Q 014484 2 GGRCSKFSICWF-HCHLKSSVLESSDLG---ETL----------------------NLEEAKAVGNLRSER--LANLIGC 53 (423)
Q Consensus 2 G~~g~v~~~~~~-~~~~~~~~~~~~~~~---~~~----------------------~~~E~~~l~~l~h~n--iv~~~~~ 53 (423)
|+||.||.+... +..+++|++...... ... ...|...+..+.+.. ++..++.
T Consensus 8 G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~ 87 (187)
T cd05119 8 GKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPVPKPIDL 87 (187)
T ss_pred ccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCCCceEec
Confidence 899999999876 788888876543211 111 134666666664432 4444443
Q ss_pred EEeCCceeEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHc-CCCeeeccCCCCCeeecCCCCeEEccc
Q 014484 54 CYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSS-KGRALYHDLNAYRILFDKDGNPRLSSF 132 (423)
Q Consensus 54 ~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~~iiH~dlkp~Nill~~~~~~kl~Df 132 (423)
...++||||++|+++...... ..... ..+..++.+++.++.++|. .+ ++|+||||+||+++ ++.++|+||
T Consensus 88 ----~~~~lv~e~~~g~~~~~~~l~--~~~~~-~~~~~~~~~~~~~l~~lh~~~~-ivH~Dl~p~Nili~-~~~~~liDf 158 (187)
T cd05119 88 ----NRHVLVMEFIGGDGIPAPRLK--DVRLL-EDPEELYDQILELMRKLYREAG-LVHGDLSEYNILVD-DGKVYIIDV 158 (187)
T ss_pred ----CCCEEEEEEeCCCCccChhhh--hhhhc-ccHHHHHHHHHHHHHHHhhccC-cCcCCCChhhEEEE-CCcEEEEEC
Confidence 236899999999543221100 00011 6778999999999999999 88 99999999999999 889999999
Q ss_pred cccccCCC
Q 014484 133 GLMKNSRD 140 (423)
Q Consensus 133 g~~~~~~~ 140 (423)
|.+.....
T Consensus 159 g~a~~~~~ 166 (187)
T cd05119 159 PQAVEIDH 166 (187)
T ss_pred cccccccC
Confidence 99865543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >TIGR02552 LcrH_SycD type III secretion low calcium response chaperone LcrH/SycD | Back alignment and domain information |
|---|
Probab=99.49 E-value=3.1e-13 Score=110.40 Aligned_cols=102 Identities=15% Similarity=0.201 Sum_probs=97.8
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHH
Q 014484 319 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLF 398 (423)
Q Consensus 319 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~ 398 (423)
......|..++..|++++|+..|++++..+|. +..++.++|.++..+|++++|+..++++++++|+++..++.+|.++.
T Consensus 18 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~ 96 (135)
T TIGR02552 18 EQIYALAYNLYQQGRYDEALKLFQLLAAYDPY-NSRYWLGLAACCQMLKEYEEAIDAYALAAALDPDDPRPYFHAAECLL 96 (135)
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHH
Confidence 44677899999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred hCCChHHHHHHHHHhhccccccC
Q 014484 399 SLGMENDARETLKDGTNLEAKKN 421 (423)
Q Consensus 399 ~~~~~~~A~~~~~~al~l~~~~~ 421 (423)
.+|++++|++.|+++++++|.+.
T Consensus 97 ~~g~~~~A~~~~~~al~~~p~~~ 119 (135)
T TIGR02552 97 ALGEPESALKALDLAIEICGENP 119 (135)
T ss_pred HcCCHHHHHHHHHHHHHhccccc
Confidence 99999999999999999999764
|
ScyD/LcrH contains three central tetratricopeptide-like repeats that are predicted to fold into an all-alpha-helical array. |
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.45 E-value=8.6e-14 Score=133.65 Aligned_cols=231 Identities=19% Similarity=0.205 Sum_probs=172.4
Q ss_pred CCCCccceeeee----cceeeeeec---CCChhhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCCCHH
Q 014484 2 GGRCSKFSICWF----HCHLKSSVL---ESSDLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLA 73 (423)
Q Consensus 2 G~~g~v~~~~~~----~~~~~~~~~---~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 73 (423)
|++|.||..... ...++++.- .........=.+|+...+.+ .|+|.++.+..++.++..++-+|+|. .+|.
T Consensus 127 g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfiqtE~~~-~sl~ 205 (524)
T KOG0601|consen 127 GSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILFIQTELCG-ESLQ 205 (524)
T ss_pred CCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcceeeecccc-chhH
Confidence 778888888762 222333321 11222333445678788888 59999999999999999999999995 6888
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHH----HHHHHHcCCCeeeccCCCCCeeecCC-CCeEEccccccccCCCCC----c-
Q 014484 74 KHLFHWETQPMKWAMRLRVALYLAQ----ALEYCSSKGRALYHDLNAYRILFDKD-GNPRLSSFGLMKNSRDGK----S- 143 (423)
Q Consensus 74 ~~i~~~~~~~~~~~~~~~i~~qi~~----~l~~lH~~~~iiH~dlkp~Nill~~~-~~~kl~Dfg~~~~~~~~~----~- 143 (423)
.+... ....++...++....+... |+..+|+.+ ++|-|+||.||+...+ ...+++|||+...+.... .
T Consensus 206 ~~~~~-~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~-~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~~~~~~~~~~ 283 (524)
T KOG0601|consen 206 SYCHT-PCNFLPDNLLWNSLRDWLSRDVTALSHLHSNN-IVHDDLKPANIFTTSDWTSCKLTDFGLVSKISDGNFSSVFK 283 (524)
T ss_pred Hhhhc-ccccCCchhhhhHHhhhhhcccccccccCCCc-ccccccchhheecccccceeecCCcceeEEccCCcccccee
Confidence 87743 3344788888899999988 999999999 9999999999999998 789999999988776542 1
Q ss_pred ----cccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHH
Q 014484 144 ----YSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVR 219 (423)
Q Consensus 144 ----~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 219 (423)
..+...|++||... +.++..+|+|++|.++.+..++..++.... ...+.......+..++....+.++..
T Consensus 284 ~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~-----~~~W~~~r~~~ip~e~~~~~s~~l~~ 357 (524)
T KOG0601|consen 284 VSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGK-----NSSWSQLRQGYIPLEFCEGGSSSLRS 357 (524)
T ss_pred eeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCC-----CCCccccccccCchhhhcCcchhhhh
Confidence 14677899999887 568889999999999999999886654321 11222222222333444444667777
Q ss_pred HHHHhcccCcCCCCCHHHHHHH
Q 014484 220 LASRCLQSEARERPNAKSLVIS 241 (423)
Q Consensus 220 li~~cl~~dp~~Rps~~~vl~~ 241 (423)
.+..|++.+|..|++.+.+..+
T Consensus 358 ~~~~~~d~~~~~~~~~q~~~~l 379 (524)
T KOG0601|consen 358 VTSQMLDEDPRLRLTAQILTAL 379 (524)
T ss_pred HHHHhcCcchhhhhHHHHHhcc
Confidence 9999999999999999888755
|
|
| >PRK10370 formate-dependent nitrite reductase complex subunit NrfG; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.3e-12 Score=113.36 Aligned_cols=103 Identities=17% Similarity=0.098 Sum_probs=96.5
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHH-HhcCC--hHHHHHHHHHhHhcCCCchHHHHHHH
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSY-LMNDM--PQEALGDAMQAQVVSPDWPTALYLQA 394 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~-~~~~~--~~~A~~~~~~a~~l~p~~~~a~~~~g 394 (423)
...+...|..+...|++++|+..|++|++++|+ +..++.++|.++ ...|+ +++|...++++++++|+++.+++.+|
T Consensus 73 ~~~w~~Lg~~~~~~g~~~~A~~a~~~Al~l~P~-~~~~~~~lA~aL~~~~g~~~~~~A~~~l~~al~~dP~~~~al~~LA 151 (198)
T PRK10370 73 SEQWALLGEYYLWRNDYDNALLAYRQALQLRGE-NAELYAALATVLYYQAGQHMTPQTREMIDKALALDANEVTALMLLA 151 (198)
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHhCCCChhHHHHHH
Confidence 446778899999999999999999999999999 999999999985 67787 59999999999999999999999999
Q ss_pred HHHHhCCChHHHHHHHHHhhccccccC
Q 014484 395 ACLFSLGMENDARETLKDGTNLEAKKN 421 (423)
Q Consensus 395 ~~~~~~~~~~~A~~~~~~al~l~~~~~ 421 (423)
.++..+|+|++|+..|+++++++|.+.
T Consensus 152 ~~~~~~g~~~~Ai~~~~~aL~l~~~~~ 178 (198)
T PRK10370 152 SDAFMQADYAQAIELWQKVLDLNSPRV 178 (198)
T ss_pred HHHHHcCCHHHHHHHHHHHHhhCCCCc
Confidence 999999999999999999999999754
|
|
| >KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.7e-13 Score=123.47 Aligned_cols=104 Identities=23% Similarity=0.392 Sum_probs=97.1
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCC---CcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHH
Q 014484 316 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTM---VSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYL 392 (423)
Q Consensus 316 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~---~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~ 392 (423)
.....++..||.+|++|+|..|.+.|+.||.++|. .++.+|.|||.++.++|+..+|+.+|+.|+++||.+.+|+.+
T Consensus 247 k~le~~k~~gN~~fk~G~y~~A~E~Yteal~idP~n~~~naklY~nra~v~~rLgrl~eaisdc~~Al~iD~syikall~ 326 (486)
T KOG0550|consen 247 KKLEVKKERGNDAFKNGNYRKAYECYTEALNIDPSNKKTNAKLYGNRALVNIRLGRLREAISDCNEALKIDSSYIKALLR 326 (486)
T ss_pred HHHHHHHhhhhhHhhccchhHHHHHHHHhhcCCccccchhHHHHHHhHhhhcccCCchhhhhhhhhhhhcCHHHHHHHHH
Confidence 34557889999999999999999999999999997 246789999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChHHHHHHHHHhhccccc
Q 014484 393 QAACLFSLGMENDARETLKDGTNLEAK 419 (423)
Q Consensus 393 ~g~~~~~~~~~~~A~~~~~~al~l~~~ 419 (423)
+|.|+..+++|++|+++|++|.+++..
T Consensus 327 ra~c~l~le~~e~AV~d~~~a~q~~~s 353 (486)
T KOG0550|consen 327 RANCHLALEKWEEAVEDYEKAMQLEKD 353 (486)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 999999999999999999999987654
|
|
| >KOG1125 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.1e-12 Score=124.54 Aligned_cols=124 Identities=15% Similarity=0.186 Sum_probs=106.1
Q ss_pred ccchhHHHHHHhhcCccCCcchhhhhhhhhhhhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHH
Q 014484 281 RLDLTAIHEILEGMGYKDDEGIANELSFQMWTSQMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRC 360 (423)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~ 360 (423)
......+.+.|.+.++..-. +.+.....-.|..++-.|+|++|+.+|+.||..+|+ +...|+.+|
T Consensus 407 ~~~l~~i~~~fLeaa~~~~~--------------~~DpdvQ~~LGVLy~ls~efdraiDcf~~AL~v~Pn-d~~lWNRLG 471 (579)
T KOG1125|consen 407 SSHLAHIQELFLEAARQLPT--------------KIDPDVQSGLGVLYNLSGEFDRAVDCFEAALQVKPN-DYLLWNRLG 471 (579)
T ss_pred HHHHHHHHHHHHHHHHhCCC--------------CCChhHHhhhHHHHhcchHHHHHHHHHHHHHhcCCc-hHHHHHHhh
Confidence 34455666666664444332 112223345789999999999999999999999999 999999999
Q ss_pred HHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 014484 361 LSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAK 419 (423)
Q Consensus 361 ~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 419 (423)
.++....+.++|++.|++|++|.|.+..++|++|..+..+|.|+||++.|-.||.+.++
T Consensus 472 AtLAN~~~s~EAIsAY~rALqLqP~yVR~RyNlgIS~mNlG~ykEA~~hlL~AL~mq~k 530 (579)
T KOG1125|consen 472 ATLANGNRSEEAISAYNRALQLQPGYVRVRYNLGISCMNLGAYKEAVKHLLEALSMQRK 530 (579)
T ss_pred HHhcCCcccHHHHHHHHHHHhcCCCeeeeehhhhhhhhhhhhHHHHHHHHHHHHHhhhc
Confidence 99999999999999999999999999999999999999999999999999999998887
|
|
| >PF13414 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2PL2_B 3IEG_B 2FBN_A | Back alignment and domain information |
|---|
Probab=99.43 E-value=4.2e-13 Score=95.72 Aligned_cols=67 Identities=18% Similarity=0.204 Sum_probs=61.6
Q ss_pred cHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHhCC-ChHHHHHHHHHhhcccc
Q 014484 352 SPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLG-MENDARETLKDGTNLEA 418 (423)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~-~~~~A~~~~~~al~l~~ 418 (423)
++..|.++|.++...|+|++|+..|++|++++|+++.+|+++|.++..+| ++++|+++|++|++++|
T Consensus 2 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~~~~~~~~A~~~~~~al~l~P 69 (69)
T PF13414_consen 2 NAEAWYNLGQIYFQQGDYEEAIEYFEKAIELDPNNAEAYYNLGLAYMKLGKDYEEAIEDFEKALKLDP 69 (69)
T ss_dssp SHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCccHHHHHHHHHHHHHcCc
Confidence 67889999999999999999999999999999999999999999999999 79999999999999887
|
... |
| >KOG4642 consensus Chaperone-dependent E3 ubiquitin protein ligase (contains TPR repeats) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.40 E-value=5.7e-13 Score=112.99 Aligned_cols=99 Identities=23% Similarity=0.314 Sum_probs=95.5
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHH
Q 014484 317 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 396 (423)
Q Consensus 317 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~ 396 (423)
.+.+++.+|+.+|..+.|..|+..|.+||.++|. .+..|.|++.||+++++++.+..++.+|++++|+..+++|.+|.+
T Consensus 9 ~a~qlkE~gnk~f~~k~y~~ai~~y~raI~~nP~-~~~Y~tnralchlk~~~~~~v~~dcrralql~~N~vk~h~flg~~ 87 (284)
T KOG4642|consen 9 SAEQLKEQGNKCFIPKRYDDAIDCYSRAICINPT-VASYYTNRALCHLKLKHWEPVEEDCRRALQLDPNLVKAHYFLGQW 87 (284)
T ss_pred HHHHHHhccccccchhhhchHHHHHHHHHhcCCC-cchhhhhHHHHHHHhhhhhhhhhhHHHHHhcChHHHHHHHHHHHH
Confidence 4568999999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhcc
Q 014484 397 LFSLGMENDARETLKDGTNL 416 (423)
Q Consensus 397 ~~~~~~~~~A~~~~~~al~l 416 (423)
+.....|++|+..+.+|..+
T Consensus 88 ~l~s~~~~eaI~~Lqra~sl 107 (284)
T KOG4642|consen 88 LLQSKGYDEAIKVLQRAYSL 107 (284)
T ss_pred HHhhccccHHHHHHHHHHHH
Confidence 99999999999999999754
|
|
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.1e-12 Score=124.91 Aligned_cols=101 Identities=13% Similarity=0.097 Sum_probs=95.3
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHH
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 397 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 397 (423)
+....+.|..+-++|++++|+.+|+.||.++|. .+.+|.|+|.+|-.+|+..+|+.+|.+||.++|.+++|+.++|.+|
T Consensus 388 aaa~nNLa~i~kqqgnl~~Ai~~YkealrI~P~-fAda~~NmGnt~ke~g~v~~A~q~y~rAI~~nPt~AeAhsNLasi~ 466 (966)
T KOG4626|consen 388 AAAHNNLASIYKQQGNLDDAIMCYKEALRIKPT-FADALSNMGNTYKEMGDVSAAIQCYTRAIQINPTFAEAHSNLASIY 466 (966)
T ss_pred hhhhhhHHHHHHhcccHHHHHHHHHHHHhcCch-HHHHHHhcchHHHHhhhHHHHHHHHHHHHhcCcHHHHHHhhHHHHh
Confidence 345566789999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHhhccccc
Q 014484 398 FSLGMENDARETLKDGTNLEAK 419 (423)
Q Consensus 398 ~~~~~~~~A~~~~~~al~l~~~ 419 (423)
...|+..+||..|+.||+++|.
T Consensus 467 kDsGni~~AI~sY~~aLklkPD 488 (966)
T KOG4626|consen 467 KDSGNIPEAIQSYRTALKLKPD 488 (966)
T ss_pred hccCCcHHHHHHHHHHHccCCC
Confidence 9999999999999999999986
|
|
| >KOG4555 consensus TPR repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.40 E-value=6e-12 Score=96.68 Aligned_cols=108 Identities=19% Similarity=0.194 Sum_probs=97.4
Q ss_pred hhhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCch---
Q 014484 311 WTSQMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWP--- 387 (423)
Q Consensus 311 ~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~--- 387 (423)
..+..+.+..+..+|..+...|+.++|++.|.++|.+-|+ .+.+|+||+.++.-+|+.++|+.++++|+++.-+..
T Consensus 36 ~~~~~e~S~~LEl~~valaE~g~Ld~AlE~F~qal~l~P~-raSayNNRAQa~RLq~~~e~ALdDLn~AleLag~~trta 114 (175)
T KOG4555|consen 36 DTQAIKASRELELKAIALAEAGDLDGALELFGQALCLAPE-RASAYNNRAQALRLQGDDEEALDDLNKALELAGDQTRTA 114 (175)
T ss_pred chHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHhccc-chHhhccHHHHHHHcCChHHHHHHHHHHHHhcCccchHH
Confidence 3455566678888999999999999999999999999999 999999999999999999999999999999976543
Q ss_pred -HHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 014484 388 -TALYLQAACLFSLGMENDARETLKDGTNLEAK 419 (423)
Q Consensus 388 -~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 419 (423)
.+|..+|..|..+|+-+.|..+|+.|.++..+
T Consensus 115 cqa~vQRg~lyRl~g~dd~AR~DFe~AA~LGS~ 147 (175)
T KOG4555|consen 115 CQAFVQRGLLYRLLGNDDAARADFEAAAQLGSK 147 (175)
T ss_pred HHHHHHHHHHHHHhCchHHHHHhHHHHHHhCCH
Confidence 48999999999999999999999999887643
|
|
| >KOG0545 consensus Aryl-hydrocarbon receptor-interacting protein [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.4e-12 Score=110.89 Aligned_cols=105 Identities=16% Similarity=0.169 Sum_probs=95.1
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhc--------CCCCC---------cHHHHhhHHHHHHhcCChHHHHHHHH
Q 014484 315 MQETLNSKKHGDTAFRAKDFSTAIDCYTQFID--------GGTMV---------SPTVYARRCLSYLMNDMPQEALGDAM 377 (423)
Q Consensus 315 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~--------~~p~~---------~~~~~~~~~~~~~~~~~~~~A~~~~~ 377 (423)
|.....+.++||.+|+.|+|.+|...|..||. ..|.. ...++.|.+.|++..|+|-++++.+.
T Consensus 175 mkav~~l~q~GN~lfk~~~ykEA~~~YreAi~~l~~L~lkEkP~e~eW~eLdk~~tpLllNy~QC~L~~~e~yevleh~s 254 (329)
T KOG0545|consen 175 MKAVPVLHQEGNRLFKLGRYKEASSKYREAIICLRNLQLKEKPGEPEWLELDKMITPLLLNYCQCLLKKEEYYEVLEHCS 254 (329)
T ss_pred hhhhHHHHHhhhhhhhhccHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhhhHHHHhHHHHHhhHHHHHHHHHHHH
Confidence 34445888999999999999999999999982 33430 45789999999999999999999999
Q ss_pred HhHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 014484 378 QAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAK 419 (423)
Q Consensus 378 ~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 419 (423)
..+..+|+|.+|||++|.+.....+.++|.++|.++|+++|.
T Consensus 255 eiL~~~~~nvKA~frRakAhaa~Wn~~eA~~D~~~vL~ldps 296 (329)
T KOG0545|consen 255 EILRHHPGNVKAYFRRAKAHAAVWNEAEAKADLQKVLELDPS 296 (329)
T ss_pred HHHhcCCchHHHHHHHHHHHHhhcCHHHHHHHHHHHHhcChh
Confidence 999999999999999999999999999999999999999996
|
|
| >TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70) | Back alignment and domain information |
|---|
Probab=99.39 E-value=3e-12 Score=131.29 Aligned_cols=102 Identities=25% Similarity=0.320 Sum_probs=95.3
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHH
Q 014484 316 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAA 395 (423)
Q Consensus 316 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~ 395 (423)
..+..++.+|+.+++.|+|++|+..|+++|+++|+ ...|.|+|.||.++|++++|+.+|++|++++|++.++|+++|.
T Consensus 125 ~~a~~~k~~G~~~~~~~~~~~Ai~~y~~al~~~p~--~~~~~n~a~~~~~l~~~~~Ai~~~~~al~l~p~~~~a~~~~a~ 202 (615)
T TIGR00990 125 KYAAKLKEKGNKAYRNKDFNKAIKLYSKAIECKPD--PVYYSNRAACHNALGDWEKVVEDTTAALELDPDYSKALNRRAN 202 (615)
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc--hHHHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 34668899999999999999999999999999996 6789999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhccccc
Q 014484 396 CLFSLGMENDARETLKDGTNLEAK 419 (423)
Q Consensus 396 ~~~~~~~~~~A~~~~~~al~l~~~ 419 (423)
+|..+|+|++|+.+|.+++.+++.
T Consensus 203 a~~~lg~~~eA~~~~~~~~~~~~~ 226 (615)
T TIGR00990 203 AYDGLGKYADALLDLTASCIIDGF 226 (615)
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCC
Confidence 999999999999999888776653
|
|
| >KOG0551 consensus Hsp90 co-chaperone CNS1 (contains TPR repeats) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.39 E-value=8.3e-13 Score=117.18 Aligned_cols=104 Identities=22% Similarity=0.340 Sum_probs=97.6
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHhcC---CCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHH
Q 014484 317 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDG---GTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQ 393 (423)
Q Consensus 317 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~---~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~ 393 (423)
.|.+++..||.+|+.++|..|+.+|+++|+. ||+.++.+|+|||.|.+.+|+|..|+.||.+|+.++|++.+||++-
T Consensus 80 ~Aen~KeeGN~~fK~Kryk~A~~~Yt~Glk~kc~D~dlnavLY~NRAAa~~~l~NyRs~l~Dcs~al~~~P~h~Ka~~R~ 159 (390)
T KOG0551|consen 80 QAENYKEEGNEYFKEKRYKDAVESYTEGLKKKCADPDLNAVLYTNRAAAQLYLGNYRSALNDCSAALKLKPTHLKAYIRG 159 (390)
T ss_pred HHHHHHHHhHHHHHhhhHHHHHHHHHHHHhhcCCCccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCcchhhhhhhh
Confidence 6889999999999999999999999999986 4666789999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHHHHHHHHHhhcccccc
Q 014484 394 AACLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 394 g~~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
|.|++.++++++|..+.+..+.++.++
T Consensus 160 Akc~~eLe~~~~a~nw~ee~~~~d~e~ 186 (390)
T KOG0551|consen 160 AKCLLELERFAEAVNWCEEGLQIDDEA 186 (390)
T ss_pred hHHHHHHHHHHHHHHHHhhhhhhhHHH
Confidence 999999999999999999998877654
|
|
| >KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.36 E-value=2.9e-12 Score=114.19 Aligned_cols=107 Identities=18% Similarity=0.228 Sum_probs=101.4
Q ss_pred hHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHH
Q 014484 314 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQ 393 (423)
Q Consensus 314 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~ 393 (423)
...++..-++.|+.++..|++.+|+..|..|++.||+ ++.+++.||.+|+.+|+-.-|+.+++++|++.|++..|...+
T Consensus 34 ~~advekhlElGk~lla~~Q~sDALt~yHaAve~dp~-~Y~aifrRaT~yLAmGksk~al~Dl~rVlelKpDF~~ARiQR 112 (504)
T KOG0624|consen 34 SPADVEKHLELGKELLARGQLSDALTHYHAAVEGDPN-NYQAIFRRATVYLAMGKSKAALQDLSRVLELKPDFMAARIQR 112 (504)
T ss_pred CHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHcCCch-hHHHHHHHHHHHhhhcCCccchhhHHHHHhcCccHHHHHHHh
Confidence 3356667788999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHHHHHHHHHhhccccccC
Q 014484 394 AACLFSLGMENDARETLKDGTNLEAKKN 421 (423)
Q Consensus 394 g~~~~~~~~~~~A~~~~~~al~l~~~~~ 421 (423)
|.+++++|++++|..+|++.|+.+|++.
T Consensus 113 g~vllK~Gele~A~~DF~~vl~~~~s~~ 140 (504)
T KOG0624|consen 113 GVVLLKQGELEQAEADFDQVLQHEPSNG 140 (504)
T ss_pred chhhhhcccHHHHHHHHHHHHhcCCCcc
Confidence 9999999999999999999999999754
|
|
| >KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.36 E-value=3.5e-13 Score=125.73 Aligned_cols=104 Identities=23% Similarity=0.294 Sum_probs=100.2
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHH
Q 014484 317 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 396 (423)
Q Consensus 317 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~ 396 (423)
.+..++.+|+.++..++|+.|+..|.+||+++|+ ++..+.+|+.++.+.++|.+|+.|+.+||+++|...++|+++|.+
T Consensus 3 ~a~e~k~ean~~l~~~~fd~avdlysKaI~ldpn-ca~~~anRa~a~lK~e~~~~Al~Da~kaie~dP~~~K~Y~rrg~a 81 (476)
T KOG0376|consen 3 SAEELKNEANEALKDKVFDVAVDLYSKAIELDPN-CAIYFANRALAHLKVESFGGALHDALKAIELDPTYIKAYVRRGTA 81 (476)
T ss_pred hhhhhhhHHhhhcccchHHHHHHHHHHHHhcCCc-ceeeechhhhhheeechhhhHHHHHHhhhhcCchhhheeeeccHH
Confidence 4567889999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhccccccC
Q 014484 397 LFSLGMENDARETLKDGTNLEAKKN 421 (423)
Q Consensus 397 ~~~~~~~~~A~~~~~~al~l~~~~~ 421 (423)
...++++.+|+.+|++..++.|.+.
T Consensus 82 ~m~l~~~~~A~~~l~~~~~l~Pnd~ 106 (476)
T KOG0376|consen 82 VMALGEFKKALLDLEKVKKLAPNDP 106 (476)
T ss_pred HHhHHHHHHHHHHHHHhhhcCcCcH
Confidence 9999999999999999999999864
|
|
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.35 E-value=3.3e-12 Score=121.80 Aligned_cols=102 Identities=11% Similarity=0.043 Sum_probs=98.0
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHH
Q 014484 317 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 396 (423)
Q Consensus 317 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~ 396 (423)
.+..+.+.|+.+...|.+++|..+|.+|++..|+ .+++++|+|.+|.++|++++|+.+|++||+++|.++++|.++|..
T Consensus 353 hadam~NLgni~~E~~~~e~A~~ly~~al~v~p~-~aaa~nNLa~i~kqqgnl~~Ai~~YkealrI~P~fAda~~NmGnt 431 (966)
T KOG4626|consen 353 HADAMNNLGNIYREQGKIEEATRLYLKALEVFPE-FAAAHNNLASIYKQQGNLDDAIMCYKEALRIKPTFADALSNMGNT 431 (966)
T ss_pred cHHHHHHHHHHHHHhccchHHHHHHHHHHhhChh-hhhhhhhHHHHHHhcccHHHHHHHHHHHHhcCchHHHHHHhcchH
Confidence 4557788999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhccccc
Q 014484 397 LFSLGMENDARETLKDGTNLEAK 419 (423)
Q Consensus 397 ~~~~~~~~~A~~~~~~al~l~~~ 419 (423)
|..+|+.++|+.+|.+|+.++|.
T Consensus 432 ~ke~g~v~~A~q~y~rAI~~nPt 454 (966)
T KOG4626|consen 432 YKEMGDVSAAIQCYTRAIQINPT 454 (966)
T ss_pred HHHhhhHHHHHHHHHHHHhcCcH
Confidence 99999999999999999999985
|
|
| >COG3063 PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.7e-11 Score=103.98 Aligned_cols=97 Identities=12% Similarity=0.029 Sum_probs=85.5
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHH
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 397 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 397 (423)
+....+.|-.++++||+..|.+.+++||+.||. +..+|..+|..|.+.|+.+.|-+.|++|++++|++++.+.|.|.-+
T Consensus 35 a~arlqLal~YL~~gd~~~A~~nlekAL~~DPs-~~~a~~~~A~~Yq~~Ge~~~A~e~YrkAlsl~p~~GdVLNNYG~FL 113 (250)
T COG3063 35 AKARLQLALGYLQQGDYAQAKKNLEKALEHDPS-YYLAHLVRAHYYQKLGENDLADESYRKALSLAPNNGDVLNNYGAFL 113 (250)
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHcCChhhHHHHHHHHHhcCCCccchhhhhhHHH
Confidence 345667888899999999999999999999998 8999999999999999999999999999999999999999988888
Q ss_pred HhCCChHHHHHHHHHhhc
Q 014484 398 FSLGMENDARETLKDGTN 415 (423)
Q Consensus 398 ~~~~~~~~A~~~~~~al~ 415 (423)
+.+|+|++|...|++|+.
T Consensus 114 C~qg~~~eA~q~F~~Al~ 131 (250)
T COG3063 114 CAQGRPEEAMQQFERALA 131 (250)
T ss_pred HhCCChHHHHHHHHHHHh
Confidence 888888888888888875
|
|
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.31 E-value=2e-11 Score=118.76 Aligned_cols=158 Identities=15% Similarity=0.161 Sum_probs=119.8
Q ss_pred ceeeeeecCCChh-hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccCCCCCCCHHHHHHHH
Q 014484 15 CHLKSSVLESSDL-GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVA 93 (423)
Q Consensus 15 ~~~~~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~i~ 93 (423)
..+.+.+.+.... ..+...+-++.|+.++||||+++++.++..+..|+|+|-+. .|..++.+ +....+.--+
T Consensus 38 ~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~-----l~~~~v~~Gl 110 (690)
T KOG1243|consen 38 GPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKE-----LGKEEVCLGL 110 (690)
T ss_pred CceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHH-----hHHHHHHHHH
Confidence 3344444433332 23456678889999999999999999999999999999984 68888854 3466777789
Q ss_pred HHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCCc----cccCcccCCccccccCCCCCCcceeh
Q 014484 94 LYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS----YSTNLAFTPPEYMRTGRVTPESVVYS 169 (423)
Q Consensus 94 ~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~----~~~t~~y~aPE~~~~~~~~~~~Di~s 169 (423)
.||+.||.|||+.+.++|++|+-.-|+|+..|..||++|.++........ ...-..|..|+.+.... -..|.|.
T Consensus 111 ~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~s~--~s~D~~~ 188 (690)
T KOG1243|consen 111 FQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDPSE--WSIDSWG 188 (690)
T ss_pred HHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcCccc--cchhhhh
Confidence 99999999999766699999999999999999999999988755443321 11123455666544222 3469999
Q ss_pred hHHHHHHHhhCC
Q 014484 170 FGTMLLDLLSGK 181 (423)
Q Consensus 170 lG~~l~el~~g~ 181 (423)
|||++++++.|.
T Consensus 189 Lg~li~el~ng~ 200 (690)
T KOG1243|consen 189 LGCLIEELFNGS 200 (690)
T ss_pred HHHHHHHHhCcc
Confidence 999999999994
|
|
| >PF13414 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2PL2_B 3IEG_B 2FBN_A | Back alignment and domain information |
|---|
Probab=99.31 E-value=4.3e-12 Score=90.48 Aligned_cols=67 Identities=21% Similarity=0.278 Sum_probs=64.1
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcC-ChHHHHHHHHHhHhcCC
Q 014484 317 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMND-MPQEALGDAMQAQVVSP 384 (423)
Q Consensus 317 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~-~~~~A~~~~~~a~~l~p 384 (423)
.+..+...|..++..|+|++|+..|+++|+++|+ ++.+|+++|.||.++| ++++|+.++++|++++|
T Consensus 2 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~-~~~~~~~~g~~~~~~~~~~~~A~~~~~~al~l~P 69 (69)
T PF13414_consen 2 NAEAWYNLGQIYFQQGDYEEAIEYFEKAIELDPN-NAEAYYNLGLAYMKLGKDYEEAIEDFEKALKLDP 69 (69)
T ss_dssp SHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHSTT-HHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHhCccHHHHHHHHHHHHHcCc
Confidence 3567889999999999999999999999999999 9999999999999999 79999999999999998
|
... |
| >PF12895 Apc3: Anaphase-promoting complex, cyclosome, subunit 3; PDB: 3KAE_D 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2XPI_A 3ULQ_A | Back alignment and domain information |
|---|
Probab=99.31 E-value=4.4e-12 Score=94.19 Aligned_cols=82 Identities=21% Similarity=0.346 Sum_probs=74.7
Q ss_pred cCCHHHHHHHHHHHhcCCCCC-cHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHhCCChHHHHHH
Q 014484 331 AKDFSTAIDCYTQFIDGGTMV-SPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARET 409 (423)
Q Consensus 331 ~~~~~~A~~~~~~ai~~~p~~-~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~ 409 (423)
+|+|++|+..|+++++.+|.+ +...++++|.||+++|+|++|+..+++ .+.+|.+...++.+|.+++.+|+|++|++.
T Consensus 2 ~~~y~~Ai~~~~k~~~~~~~~~~~~~~~~la~~~~~~~~y~~A~~~~~~-~~~~~~~~~~~~l~a~~~~~l~~y~eAi~~ 80 (84)
T PF12895_consen 2 QGNYENAIKYYEKLLELDPTNPNSAYLYNLAQCYFQQGKYEEAIELLQK-LKLDPSNPDIHYLLARCLLKLGKYEEAIKA 80 (84)
T ss_dssp TT-HHHHHHHHHHHHHHHCGTHHHHHHHHHHHHHHHTTHHHHHHHHHHC-HTHHHCHHHHHHHHHHHHHHTT-HHHHHHH
T ss_pred CccHHHHHHHHHHHHHHCCCChhHHHHHHHHHHHHHCCCHHHHHHHHHH-hCCCCCCHHHHHHHHHHHHHhCCHHHHHHH
Confidence 689999999999999999952 467788899999999999999999999 999999999999999999999999999999
Q ss_pred HHHh
Q 014484 410 LKDG 413 (423)
Q Consensus 410 ~~~a 413 (423)
|++|
T Consensus 81 l~~~ 84 (84)
T PF12895_consen 81 LEKA 84 (84)
T ss_dssp HHHH
T ss_pred HhcC
Confidence 9986
|
|
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=99.30 E-value=8.8e-12 Score=106.01 Aligned_cols=122 Identities=15% Similarity=0.041 Sum_probs=90.8
Q ss_pred CCCCccceeeeecceeeeeecCCChhhHHHHHHHHHHHhcCCCCC-ccceEeEEEeCCceeEEEecCCCCCHHhhhccCC
Q 014484 2 GGRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNLRSER-LANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80 (423)
Q Consensus 2 G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~ 80 (423)
|.++.||.....+..+.+|+..........+..|+.++..+.+.+ +++++.+.. ...++||||++|.++...-
T Consensus 9 G~~~~vy~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~G~~l~~~~---- 82 (170)
T cd05151 9 GMTNKNYRVEVANKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIEGSELLTED---- 82 (170)
T ss_pred cccCceEEEEECCeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecCCCcccccc----
Confidence 667899988877777888876554323345678999999986544 455555443 3458999999998876431
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHcCCC----eeeccCCCCCeeecCCCCeEEccccccc
Q 014484 81 TQPMKWAMRLRVALYLAQALEYCSSKGR----ALYHDLNAYRILFDKDGNPRLSSFGLMK 136 (423)
Q Consensus 81 ~~~~~~~~~~~i~~qi~~~l~~lH~~~~----iiH~dlkp~Nill~~~~~~kl~Dfg~~~ 136 (423)
. ....++.+++.+|..||..+. ++|+|++|.||+++ ++.++++|||.+.
T Consensus 83 ---~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 83 ---F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred ---c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 1 113456899999999999871 39999999999999 6689999999764
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >KOG1126 consensus DNA-binding cell division cycle control protein [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.30 E-value=2.6e-12 Score=123.77 Aligned_cols=100 Identities=16% Similarity=0.117 Sum_probs=95.2
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHh
Q 014484 320 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFS 399 (423)
Q Consensus 320 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~ 399 (423)
.|-..||.+--+++++.||++|++||++||+ .+-+|..+|.-+.....|+.|...|+.|+.++|++..|||.+|.+|.+
T Consensus 423 sWca~GNcfSLQkdh~~Aik~f~RAiQldp~-faYayTLlGhE~~~~ee~d~a~~~fr~Al~~~~rhYnAwYGlG~vy~K 501 (638)
T KOG1126|consen 423 SWCALGNCFSLQKDHDTAIKCFKRAIQLDPR-FAYAYTLLGHESIATEEFDKAMKSFRKALGVDPRHYNAWYGLGTVYLK 501 (638)
T ss_pred HHHHhcchhhhhhHHHHHHHHHHHhhccCCc-cchhhhhcCChhhhhHHHHhHHHHHHhhhcCCchhhHHHHhhhhheec
Confidence 7778899999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHhhcccccc
Q 014484 400 LGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 400 ~~~~~~A~~~~~~al~l~~~~ 420 (423)
+++++.|.-.|++|++++|.+
T Consensus 502 qek~e~Ae~~fqkA~~INP~n 522 (638)
T KOG1126|consen 502 QEKLEFAEFHFQKAVEINPSN 522 (638)
T ss_pred cchhhHHHHHHHhhhcCCccc
Confidence 999999999999999999975
|
|
| >TIGR02795 tol_pal_ybgF tol-pal system protein YbgF | Back alignment and domain information |
|---|
Probab=99.30 E-value=3.3e-11 Score=95.74 Aligned_cols=101 Identities=19% Similarity=0.171 Sum_probs=93.6
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCc---HHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCc---hHHHHH
Q 014484 319 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVS---PTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW---PTALYL 392 (423)
Q Consensus 319 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~---~~a~~~ 392 (423)
..+...|..+++.|++++|++.|.++++.+|+ + ..+++.+|.++.+.|++++|+..+++++..+|++ +.+++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~ 81 (119)
T TIGR02795 3 EAYYDAALLVLKAGDYADAIQAFQAFLKKYPK-STYAPNAHYWLGEAYYAQGKYADAAKAFLAVVKKYPKSPKAPDALLK 81 (119)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC-ccccHHHHHHHHHHHHhhccHHHHHHHHHHHHHHCCCCCcccHHHHH
Confidence 35678899999999999999999999999987 5 5789999999999999999999999999999885 678999
Q ss_pred HHHHHHhCCChHHHHHHHHHhhcccccc
Q 014484 393 QAACLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 393 ~g~~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
+|.++..+|++++|+..|+++++..|..
T Consensus 82 ~~~~~~~~~~~~~A~~~~~~~~~~~p~~ 109 (119)
T TIGR02795 82 LGMSLQELGDKEKAKATLQQVIKRYPGS 109 (119)
T ss_pred HHHHHHHhCChHHHHHHHHHHHHHCcCC
Confidence 9999999999999999999999998874
|
Members of this protein family are the product of one of seven genes regularly clustered in operons to encode the proteins of the tol-pal system, which is critical for maintaining the integrity of the bacterial outer membrane. The gene for this periplasmic protein has been designated orf2 and ybgF. All members of the seed alignment were from unique tol-pal gene regions from completed bacterial genomes. The architecture of this protein is a signal sequence, a low-complexity region usually rich in Asn and Gln, a well-conserved region with tandem repeats that resemble the tetratricopeptide (TPR) repeat, involved in protein-protein interaction. |
| >cd00189 TPR Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans in various subcellular locations; involved in a variety of functions including protein-protein interactions, but common features in the interaction partners have not been defined; involved in chaperone, cell-cycle, transciption, and protein transport complexes; the number of TPR motifs varies among proteins (1,3-11,13 15,16,19); 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accomodate an alpha-helix of a target protein; it has been proposed that TPR proteins preferably interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes; examples of TPR-proteins include, Cdc16p, Cdc23p and C | Back alignment and domain information |
|---|
Probab=99.29 E-value=3.1e-11 Score=90.89 Aligned_cols=98 Identities=20% Similarity=0.310 Sum_probs=93.4
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHhC
Q 014484 321 SKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSL 400 (423)
Q Consensus 321 ~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~ 400 (423)
+...|..++..|++++|+..++++++..|. +..++..+|.++...+++++|+..+++++.+.|.+..+++.+|.++..+
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (100)
T cd00189 3 LLNLGNLYYKLGDYDEALEYYEKALELDPD-NADAYYNLAAAYYKLGKYEEALEDYEKALELDPDNAKAYYNLGLAYYKL 81 (100)
T ss_pred HHHHHHHHHHHhcHHHHHHHHHHHHhcCCc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhHHHHHHHHHHHH
Confidence 467889999999999999999999999999 8899999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHhhccccc
Q 014484 401 GMENDARETLKDGTNLEAK 419 (423)
Q Consensus 401 ~~~~~A~~~~~~al~l~~~ 419 (423)
|++++|...++++++++|.
T Consensus 82 ~~~~~a~~~~~~~~~~~~~ 100 (100)
T cd00189 82 GKYEEALEAYEKALELDPN 100 (100)
T ss_pred HhHHHHHHHHHHHHccCCC
Confidence 9999999999999988763
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.7e-11 Score=119.43 Aligned_cols=133 Identities=20% Similarity=0.126 Sum_probs=90.4
Q ss_pred CCCCccceeeee-cceeeeeecCCChhh-----------------------------------------HHHHHHHHHHH
Q 014484 2 GGRCSKFSICWF-HCHLKSSVLESSDLG-----------------------------------------ETLNLEEAKAV 39 (423)
Q Consensus 2 G~~g~v~~~~~~-~~~~~~~~~~~~~~~-----------------------------------------~~~~~~E~~~l 39 (423)
||+|.||++... |..|++|+....... .-+|.+|.+.+
T Consensus 128 aSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~Ea~n~ 207 (437)
T TIGR01982 128 ASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRREAANA 207 (437)
T ss_pred eehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHHHHHHH
Confidence 789999999984 888999887443210 00244556555
Q ss_pred hcCC----CCCccceEeEE-EeCCceeEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHH-HHHHHHcCCCeeecc
Q 014484 40 GNLR----SERLANLIGCC-YEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQ-ALEYCSSKGRALYHD 113 (423)
Q Consensus 40 ~~l~----h~niv~~~~~~-~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~i~~qi~~-~l~~lH~~~~iiH~d 113 (423)
..+. +.+-+.+-.++ ......++||||++|++|.+...... ...+ ...++..++. .+..+|..| ++|+|
T Consensus 208 ~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~-~~~~---~~~ia~~~~~~~l~ql~~~g-~~H~D 282 (437)
T TIGR01982 208 SELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDE-AGLD---RKALAENLARSFLNQVLRDG-FFHAD 282 (437)
T ss_pred HHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHh-cCCC---HHHHHHHHHHHHHHHHHhCC-ceeCC
Confidence 5552 22222322222 22345789999999999988764211 1122 2345566655 478889999 99999
Q ss_pred CCCCCeeecCCCCeEEccccccccCC
Q 014484 114 LNAYRILFDKDGNPRLSSFGLMKNSR 139 (423)
Q Consensus 114 lkp~Nill~~~~~~kl~Dfg~~~~~~ 139 (423)
++|.||+++.+|.++++|||++....
T Consensus 283 ~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 283 LHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred CCcccEEECCCCcEEEEeCCCeeECC
Confidence 99999999999999999999876543
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70) | Back alignment and domain information |
|---|
Probab=99.26 E-value=4.6e-11 Score=122.61 Aligned_cols=99 Identities=17% Similarity=0.144 Sum_probs=60.9
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHh
Q 014484 320 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFS 399 (423)
Q Consensus 320 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~ 399 (423)
.+...|..++..|++++|+..|+++++++|. ...+|.++|.++..+|++++|+.+++++++++|+++.+|+.+|.+++.
T Consensus 333 a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~-~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~~ 411 (615)
T TIGR00990 333 ALNLRGTFKCLKGKHLEALADLSKSIELDPR-VTQSYIKRASMNLELGDPDKAEEDFDKALKLNSEDPDIYYHRAQLHFI 411 (615)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 3445556666666666666666666666665 566666666666666666666666666666666666666666666666
Q ss_pred CCChHHHHHHHHHhhccccc
Q 014484 400 LGMENDARETLKDGTNLEAK 419 (423)
Q Consensus 400 ~~~~~~A~~~~~~al~l~~~ 419 (423)
+|++++|+.+|+++++++|.
T Consensus 412 ~g~~~~A~~~~~kal~l~P~ 431 (615)
T TIGR00990 412 KGEFAQAGKDYQKSIDLDPD 431 (615)
T ss_pred cCCHHHHHHHHHHHHHcCcc
Confidence 66666666666666666554
|
|
| >KOG1308 consensus Hsp70-interacting protein Hip/Transient component of progesterone receptor complexes and an Hsp70-binding protein [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.9e-11 Score=109.35 Aligned_cols=107 Identities=22% Similarity=0.284 Sum_probs=101.0
Q ss_pred hhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHH
Q 014484 313 SQMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYL 392 (423)
Q Consensus 313 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~ 392 (423)
..+..+...+-++..++..|++++|++.|+.||+++|. .+..|.+|+.++++++++..|+++|+.|++++|+.+..|-.
T Consensus 109 e~~eqa~e~k~~A~eAln~G~~~~ai~~~t~ai~lnp~-~a~l~~kr~sv~lkl~kp~~airD~d~A~ein~Dsa~~ykf 187 (377)
T KOG1308|consen 109 EMMDQANDKKVQASEALNDGEFDTAIELFTSAIELNPP-LAILYAKRASVFLKLKKPNAAIRDCDFAIEINPDSAKGYKF 187 (377)
T ss_pred HHHHHHHHHHHHHHHHhcCcchhhhhcccccccccCCc-hhhhcccccceeeeccCCchhhhhhhhhhccCcccccccch
Confidence 34456668889999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChHHHHHHHHHhhcccccc
Q 014484 393 QAACLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 393 ~g~~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
+|.+...+|++++|..++..|+++|-..
T Consensus 188 rg~A~rllg~~e~aa~dl~~a~kld~dE 215 (377)
T KOG1308|consen 188 RGYAERLLGNWEEAAHDLALACKLDYDE 215 (377)
T ss_pred hhHHHHHhhchHHHHHHHHHHHhccccH
Confidence 9999999999999999999999998654
|
|
| >PRK02603 photosystem I assembly protein Ycf3; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.1e-10 Score=99.31 Aligned_cols=105 Identities=20% Similarity=0.197 Sum_probs=94.6
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCC--cHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHH
Q 014484 316 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMV--SPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQ 393 (423)
Q Consensus 316 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~--~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~ 393 (423)
..+..+...|..+...|++++|+..|+++++..|+. ...++.++|.++.++|++++|+..+++++.++|++..++..+
T Consensus 33 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 112 (172)
T PRK02603 33 KEAFVYYRDGMSAQADGEYAEALENYEEALKLEEDPNDRSYILYNMGIIYASNGEHDKALEYYHQALELNPKQPSALNNI 112 (172)
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHH
Confidence 345577889999999999999999999999887651 257999999999999999999999999999999999999999
Q ss_pred HHHHHhCCC--------------hHHHHHHHHHhhcccccc
Q 014484 394 AACLFSLGM--------------ENDARETLKDGTNLEAKK 420 (423)
Q Consensus 394 g~~~~~~~~--------------~~~A~~~~~~al~l~~~~ 420 (423)
|.++..+|+ +++|++.++++++++|.+
T Consensus 113 g~~~~~~g~~~~a~~~~~~A~~~~~~A~~~~~~a~~~~p~~ 153 (172)
T PRK02603 113 AVIYHKRGEKAEEAGDQDEAEALFDKAAEYWKQAIRLAPNN 153 (172)
T ss_pred HHHHHHcCChHhHhhCHHHHHHHHHHHHHHHHHHHhhCchh
Confidence 999999998 688999999999888864
|
|
| >CHL00033 ycf3 photosystem I assembly protein Ycf3 | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.5e-10 Score=98.16 Aligned_cols=106 Identities=20% Similarity=0.127 Sum_probs=91.2
Q ss_pred hHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCC--cHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHH
Q 014484 314 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMV--SPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALY 391 (423)
Q Consensus 314 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~--~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~ 391 (423)
....+..+...|..++..|+|++|+..|.+++.+.|+. ...++.++|.++...|++++|+..+++|+.++|.+..++.
T Consensus 31 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~~~~~~~~~~~ 110 (168)
T CHL00033 31 GEKEAFTYYRDGMSAQSEGEYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFQALERNPFLPQALN 110 (168)
T ss_pred hhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhccccchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHH
Confidence 34466778889999999999999999999999887651 2458999999999999999999999999999999999999
Q ss_pred HHHHHHH-------hCCChH-------HHHHHHHHhhccccc
Q 014484 392 LQAACLF-------SLGMEN-------DARETLKDGTNLEAK 419 (423)
Q Consensus 392 ~~g~~~~-------~~~~~~-------~A~~~~~~al~l~~~ 419 (423)
++|.++. .+|+++ +|+..|++++.++|.
T Consensus 111 ~la~i~~~~~~~~~~~g~~~~A~~~~~~a~~~~~~a~~~~p~ 152 (168)
T CHL00033 111 NMAVICHYRGEQAIEQGDSEIAEAWFDQAAEYWKQAIALAPG 152 (168)
T ss_pred HHHHHHHHhhHHHHHcccHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 9999999 777877 556666667777774
|
|
| >KOG0547 consensus Translocase of outer mitochondrial membrane complex, subunit TOM70/TOM72 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.22 E-value=7.5e-11 Score=109.83 Aligned_cols=102 Identities=17% Similarity=0.218 Sum_probs=96.7
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHH
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 397 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 397 (423)
+..+...|.-.|-.|++..|...++++|.++|. +...|..||.+|...++.++-..+|++|..+||+|++.||.+|+.+
T Consensus 326 A~al~~~gtF~fL~g~~~~a~~d~~~~I~l~~~-~~~lyI~~a~~y~d~~~~~~~~~~F~~A~~ldp~n~dvYyHRgQm~ 404 (606)
T KOG0547|consen 326 AEALLLRGTFHFLKGDSLGAQEDFDAAIKLDPA-FNSLYIKRAAAYADENQSEKMWKDFNKAEDLDPENPDVYYHRGQMR 404 (606)
T ss_pred HHHHHHhhhhhhhcCCchhhhhhHHHHHhcCcc-cchHHHHHHHHHhhhhccHHHHHHHHHHHhcCCCCCchhHhHHHHH
Confidence 556777899999999999999999999999999 8888999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHhhcccccc
Q 014484 398 FSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 398 ~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
+-+++|++|+.+|++|+.|+|++
T Consensus 405 flL~q~e~A~aDF~Kai~L~pe~ 427 (606)
T KOG0547|consen 405 FLLQQYEEAIADFQKAISLDPEN 427 (606)
T ss_pred HHHHHHHHHHHHHHHHhhcChhh
Confidence 99999999999999999999975
|
|
| >PRK09782 bacteriophage N4 receptor, outer membrane subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.2e-10 Score=122.93 Aligned_cols=101 Identities=8% Similarity=-0.102 Sum_probs=96.8
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHH
Q 014484 319 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLF 398 (423)
Q Consensus 319 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~ 398 (423)
..+...|..+.+.|++++|+..|.++++++|+ +..+++++|.++...|++++|+..+++|++++|+++.+++++|.++.
T Consensus 610 ~a~~~LA~~l~~lG~~deA~~~l~~AL~l~Pd-~~~a~~nLG~aL~~~G~~eeAi~~l~~AL~l~P~~~~a~~nLA~al~ 688 (987)
T PRK09782 610 NAYVARATIYRQRHNVPAAVSDLRAALELEPN-NSNYQAALGYALWDSGDIAQSREMLERAHKGLPDDPALIRQLAYVNQ 688 (987)
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 35667899999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred hCCChHHHHHHHHHhhcccccc
Q 014484 399 SLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 399 ~~~~~~~A~~~~~~al~l~~~~ 420 (423)
.+|++++|+..|++|++++|..
T Consensus 689 ~lGd~~eA~~~l~~Al~l~P~~ 710 (987)
T PRK09782 689 RLDDMAATQHYARLVIDDIDNQ 710 (987)
T ss_pred HCCCHHHHHHHHHHHHhcCCCC
Confidence 9999999999999999999974
|
|
| >PLN02789 farnesyltranstransferase | Back alignment and domain information |
|---|
Probab=99.20 E-value=3.4e-10 Score=105.21 Aligned_cols=148 Identities=10% Similarity=-0.010 Sum_probs=111.8
Q ss_pred CcccccccccchhHHHHHHhhcCccCCc-chhhhhhhhhhhhhHHHHHHHHHHHHHHHhcC-CHHHHHHHHHHHhcCCCC
Q 014484 273 TPLGEACSRLDLTAIHEILEGMGYKDDE-GIANELSFQMWTSQMQETLNSKKHGDTAFRAK-DFSTAIDCYTQFIDGGTM 350 (423)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~A~~~~~~ai~~~p~ 350 (423)
.|+..-..+.+-..+...|.+.=..... ..+-....+...-.-.....+..+|..+...| ++++|+..++++++.+|+
T Consensus 25 ~~~~~i~y~~~~~~a~~~~ra~l~~~e~serAL~lt~~aI~lnP~~ytaW~~R~~iL~~L~~~l~eeL~~~~~~i~~npk 104 (320)
T PLN02789 25 NPVVPIAYTPEFREAMDYFRAVYASDERSPRALDLTADVIRLNPGNYTVWHFRRLCLEALDADLEEELDFAEDVAEDNPK 104 (320)
T ss_pred CcccceeeCHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCchhHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHCCc
Confidence 3444444455556666666663222221 11112222222222223346667888888888 689999999999999999
Q ss_pred CcHHHHhhHHHHHHhcCCh--HHHHHHHHHhHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHhhccccccC
Q 014484 351 VSPTVYARRCLSYLMNDMP--QEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKKN 421 (423)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~--~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 421 (423)
+..+|++|+.++.++++. ++++..++++++++|+|..+|..+|.++..+|+|++|++.+.+++++|+.+.
T Consensus 105 -nyqaW~~R~~~l~~l~~~~~~~el~~~~kal~~dpkNy~AW~~R~w~l~~l~~~~eeL~~~~~~I~~d~~N~ 176 (320)
T PLN02789 105 -NYQIWHHRRWLAEKLGPDAANKELEFTRKILSLDAKNYHAWSHRQWVLRTLGGWEDELEYCHQLLEEDVRNN 176 (320)
T ss_pred -chHHhHHHHHHHHHcCchhhHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCch
Confidence 999999999999999874 7899999999999999999999999999999999999999999999998764
|
|
| >PRK15331 chaperone protein SicA; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.7e-10 Score=93.93 Aligned_cols=97 Identities=9% Similarity=0.011 Sum_probs=93.3
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHH
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 397 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 397 (423)
...+...|..++.+|++++|...|.-...++|. +...+..+|.|+..+++|++|+..|..|..++++++...|..|.|+
T Consensus 37 le~iY~~Ay~~y~~Gk~~eA~~~F~~L~~~d~~-n~~Y~~GLaa~~Q~~k~y~~Ai~~Y~~A~~l~~~dp~p~f~agqC~ 115 (165)
T PRK15331 37 MDGLYAHAYEFYNQGRLDEAETFFRFLCIYDFY-NPDYTMGLAAVCQLKKQFQKACDLYAVAFTLLKNDYRPVFFTGQCQ 115 (165)
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCccchHHHHH
Confidence 346778899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHhhc
Q 014484 398 FSLGMENDARETLKDGTN 415 (423)
Q Consensus 398 ~~~~~~~~A~~~~~~al~ 415 (423)
+.+|+.+.|+..|+.+++
T Consensus 116 l~l~~~~~A~~~f~~a~~ 133 (165)
T PRK15331 116 LLMRKAAKARQCFELVNE 133 (165)
T ss_pred HHhCCHHHHHHHHHHHHh
Confidence 999999999999999987
|
|
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.9e-10 Score=95.31 Aligned_cols=126 Identities=17% Similarity=0.187 Sum_probs=90.9
Q ss_pred CCCCccceeeeecceeeee-ecCC----Ch----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICWFHCHLKSS-VLES----SD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~~~~~~~~~-~~~~----~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 72 (423)
|+=..+|.+.|.+..+.+| +.++ +. ....+..+|++++.++.--.|..-.=+..+.+...++|||++|..|
T Consensus 7 GAEa~i~~~~~~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I~G~~l 86 (204)
T COG3642 7 GAEAIIYLTDFLGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYIEGELL 86 (204)
T ss_pred CcceeEEeeeccCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEeCChhH
Confidence 4445677777766443332 2222 11 1244667899999999665555555555666667899999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccC
Q 014484 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNS 138 (423)
Q Consensus 73 ~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 138 (423)
.+.+... ...++..+-.-+.-||..| |+|+||.++||+++..+ +.++|||++...
T Consensus 87 kd~l~~~---------~~~~~r~vG~~vg~lH~~g-ivHGDLTtsNiIl~~~~-i~~IDfGLg~~s 141 (204)
T COG3642 87 KDALEEA---------RPDLLREVGRLVGKLHKAG-IVHGDLTTSNIILSGGR-IYFIDFGLGEFS 141 (204)
T ss_pred HHHHHhc---------chHHHHHHHHHHHHHHhcC-eecCCCccceEEEeCCc-EEEEECCccccc
Confidence 9888532 2456677777778899999 99999999999998665 999999998643
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.16 E-value=2.9e-11 Score=116.48 Aligned_cols=231 Identities=16% Similarity=0.133 Sum_probs=163.2
Q ss_pred CCCCccceeeee---cceeeeeecCCChhh---HHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF---HCHLKSSVLESSDLG---ETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~---~~~~~~~~~~~~~~~---~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|+|+.||..... +..++++.+.+.-.. ...-+.|+-+...+ .|.+++..+..|......|+--|||.++++..
T Consensus 276 ~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e~~~~~s~~l 355 (524)
T KOG0601|consen 276 GNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPLEFCEGGSSSL 355 (524)
T ss_pred CccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCchhhhcCcchhh
Confidence 456666665532 344555544333221 11224677777777 69999999999988888899999999998877
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCC-CCeEEccccccccCCCCCc--cccCccc-
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKD-GNPRLSSFGLMKNSRDGKS--YSTNLAF- 150 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~-~~~kl~Dfg~~~~~~~~~~--~~~t~~y- 150 (423)
.+ .....+++...+++..|++.++.++|+.. ++|+|++|+||++..+ +..++.|||....+.-... ..++..|
T Consensus 356 ~~--~~~~~~d~~~~~~~~~q~~~~l~~i~s~~-~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~~~~~~~~~r~~p 432 (524)
T KOG0601|consen 356 RS--VTSQMLDEDPRLRLTAQILTALNVIHSKL-FVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFSSGVFHHIDRLYP 432 (524)
T ss_pred hh--HHHHhcCcchhhhhHHHHHhccccccchh-hhcccccccceeeccchhhhhccccccccccceecccccccccccc
Confidence 66 23456888899999999999999999999 9999999999999876 7789999998765332222 2233344
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcC
Q 014484 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (423)
Q Consensus 151 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (423)
.++.......+..+.|++|||..+.+.+++....... ..+..+.. ......+ ....++..+.+.+...++.
T Consensus 433 ~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~-------~~~~~i~~-~~~p~~~-~~~~~~q~~~kv~~~~~~~ 503 (524)
T KOG0601|consen 433 IAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESG-------VQSLTIRS-GDTPNLP-GLKLQLQVLLKVMINPDRK 503 (524)
T ss_pred cchhhccccccccccccccccccccccccCcccCccc-------ccceeeec-ccccCCC-chHHhhhhhhhhhcCCccc
Confidence 2444555566888999999999999999998544331 11111111 1111222 2347788999999999999
Q ss_pred CCCCHHHHHHHHHh
Q 014484 231 ERPNAKSLVISLMS 244 (423)
Q Consensus 231 ~Rps~~~vl~~l~~ 244 (423)
.||++.++..+...
T Consensus 504 ~~~l~~~l~~~~~~ 517 (524)
T KOG0601|consen 504 RRPSAVELSLHSEF 517 (524)
T ss_pred cchhhhhhcccchh
Confidence 99999988766543
|
|
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.15 E-value=2.7e-10 Score=93.96 Aligned_cols=136 Identities=15% Similarity=0.128 Sum_probs=98.2
Q ss_pred CCCCccceeeeecceeee-eecCCC--------hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCC-CC
Q 014484 2 GGRCSKFSICWFHCHLKS-SVLESS--------DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPN-ET 71 (423)
Q Consensus 2 G~~g~v~~~~~~~~~~~~-~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~-~~ 71 (423)
|+=+.|+.+.|.++...+ .++.+. .....+..+|++.|.++.--.|.--.-++.+...-.++|||++| .+
T Consensus 18 GAEArv~~~~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME~~~g~~~ 97 (229)
T KOG3087|consen 18 GAEARVPRGSFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYMEFIDGAST 97 (229)
T ss_pred cceeeEeeeccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEEeccchhH
Confidence 444567778887766333 333322 12345678899999999765665555566666667899999988 57
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCC---CeEEccccccccC
Q 014484 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG---NPRLSSFGLMKNS 138 (423)
Q Consensus 72 L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~---~~kl~Dfg~~~~~ 138 (423)
+.+++..........+....++..|-..+.-||.++ +|||||..+||++..+| .+.++|||++...
T Consensus 98 vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~nd-iiHGDLTTSNill~~~~~~~~~~lIdfgls~~s 166 (229)
T KOG3087|consen 98 VKDFILSTMEDESEDEGLAELARRIGELIGKLHDND-IIHGDLTTSNILLRSDGNQITPILIDFGLSSVS 166 (229)
T ss_pred HHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCC-eecccccccceEEecCCCcCceEEEeecchhcc
Confidence 888886433333334444788899999999999999 99999999999997665 3589999997543
|
|
| >PRK12370 invasion protein regulator; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=2.6e-10 Score=115.14 Aligned_cols=87 Identities=16% Similarity=0.073 Sum_probs=56.4
Q ss_pred CCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHhCCChHHHHHHHH
Q 014484 332 KDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLK 411 (423)
Q Consensus 332 ~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~ 411 (423)
+++++|+..+++|++++|+ +..++..+|.++...|++++|+..+++|++++|+++.+|+.+|.++..+|++++|+..|+
T Consensus 318 ~~~~~A~~~~~~Al~ldP~-~~~a~~~lg~~~~~~g~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~G~~~eAi~~~~ 396 (553)
T PRK12370 318 NAMIKAKEHAIKATELDHN-NPQALGLLGLINTIHSEYIVGSLLFKQANLLSPISADIKYYYGWNLFMAGQLEEALQTIN 396 (553)
T ss_pred hHHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 3456666666666666666 666666666666666666666666666666666666666666666666666666666666
Q ss_pred Hhhccccc
Q 014484 412 DGTNLEAK 419 (423)
Q Consensus 412 ~al~l~~~ 419 (423)
+|++++|.
T Consensus 397 ~Al~l~P~ 404 (553)
T PRK12370 397 ECLKLDPT 404 (553)
T ss_pred HHHhcCCC
Confidence 66666665
|
|
| >PF13432 TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL_A 3CVQ_A 3CV0_A 2GW1_B 3CVN_A 3QKY_A 2PL2_B | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.7e-10 Score=81.01 Aligned_cols=62 Identities=18% Similarity=0.193 Sum_probs=31.0
Q ss_pred HHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCc
Q 014484 324 HGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW 386 (423)
Q Consensus 324 ~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~ 386 (423)
+|..+++.|+|++|+..|+++++.+|+ +..+++.+|.++..+|++++|+..++++++++|++
T Consensus 3 ~a~~~~~~g~~~~A~~~~~~~l~~~P~-~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~P~~ 64 (65)
T PF13432_consen 3 LARALYQQGDYDEAIAAFEQALKQDPD-NPEAWYLLGRILYQQGRYDEALAYYERALELDPDN 64 (65)
T ss_dssp HHHHHHHCTHHHHHHHHHHHHHCCSTT-HHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTT-
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCC
Confidence 344455555555555555555555555 55555555555555555555555555555555544
|
|
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=4.8e-10 Score=114.11 Aligned_cols=134 Identities=7% Similarity=-0.046 Sum_probs=103.0
Q ss_pred hHHHHHHhhcCccCCcchhhhhhhhhhhhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHH
Q 014484 285 TAIHEILEGMGYKDDEGIANELSFQMWTSQMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYL 364 (423)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~ 364 (423)
.+..+.++..+-+.....+-.-..+....-+..+..+...|....+.|++++|+..+..+++++|+ +..++.+++.++.
T Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~La~i~~~~g~~~ea~~~l~~~~~~~Pd-~~~a~~~~a~~L~ 131 (694)
T PRK15179 53 QQARQVLERHAAVHKPAAALPELLDYVRRYPHTELFQVLVARALEAAHRSDEGLAVWRGIHQRFPD-SSEAFILMLRGVK 131 (694)
T ss_pred HHHHHHHHHhhhhcchHhhHHHHHHHHHhccccHHHHHHHHHHHHHcCCcHHHHHHHHHHHhhCCC-cHHHHHHHHHHHH
Confidence 344455555555555433333334444555566777778888888888888888888888888888 8888888888888
Q ss_pred hcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 014484 365 MNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAK 419 (423)
Q Consensus 365 ~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 419 (423)
+++++++|+..+++++..+|+++.+++.+|.++..+|+|++|++.|++++.-+|.
T Consensus 132 ~~~~~eeA~~~~~~~l~~~p~~~~~~~~~a~~l~~~g~~~~A~~~y~~~~~~~p~ 186 (694)
T PRK15179 132 RQQGIEAGRAEIELYFSGGSSSAREILLEAKSWDEIGQSEQADACFERLSRQHPE 186 (694)
T ss_pred HhccHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHhcCCC
Confidence 8888888888888888888888888888888888888888888888888875554
|
|
| >PRK15359 type III secretion system chaperone protein SscB; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=2.3e-10 Score=94.11 Aligned_cols=83 Identities=14% Similarity=0.016 Sum_probs=78.1
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHH
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 397 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 397 (423)
...+...|..+...|++++|+..|+++++++|. ++.+++++|.|+..+|++++|+..|++|++++|+++..+.++|.++
T Consensus 58 ~~a~~~lg~~~~~~g~~~~A~~~y~~Al~l~p~-~~~a~~~lg~~l~~~g~~~eAi~~~~~Al~~~p~~~~~~~~~~~~~ 136 (144)
T PRK15359 58 WRAHIALAGTWMMLKEYTTAINFYGHALMLDAS-HPEPVYQTGVCLKMMGEPGLAREAFQTAIKMSYADASWSEIRQNAQ 136 (144)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC-CcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHH
Confidence 456678999999999999999999999999999 9999999999999999999999999999999999999999999988
Q ss_pred HhCC
Q 014484 398 FSLG 401 (423)
Q Consensus 398 ~~~~ 401 (423)
..++
T Consensus 137 ~~l~ 140 (144)
T PRK15359 137 IMVD 140 (144)
T ss_pred HHHH
Confidence 6653
|
|
| >PF13432 TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL_A 3CVQ_A 3CV0_A 2GW1_B 3CVN_A 3QKY_A 2PL2_B | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.3e-10 Score=81.67 Aligned_cols=64 Identities=22% Similarity=0.230 Sum_probs=59.8
Q ss_pred hhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 014484 357 ARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 357 ~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
+.+|..++..|+|++|++.++++++.+|+++.+++.+|.++..+|++++|+..|+++++++|.+
T Consensus 1 ~~~a~~~~~~g~~~~A~~~~~~~l~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~P~~ 64 (65)
T PF13432_consen 1 YALARALYQQGDYDEAIAAFEQALKQDPDNPEAWYLLGRILYQQGRYDEALAYYERALELDPDN 64 (65)
T ss_dssp HHHHHHHHHCTHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTT-
T ss_pred ChHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCC
Confidence 3679999999999999999999999999999999999999999999999999999999999864
|
|
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=99.13 E-value=4e-11 Score=118.18 Aligned_cols=130 Identities=14% Similarity=0.050 Sum_probs=86.2
Q ss_pred CCCCccceeeee--cceeeeeecCCChhh-----------------------------------H------HHHHHHHHH
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLG-----------------------------------E------TLNLEEAKA 38 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~-----------------------------------~------~~~~~E~~~ 38 (423)
||+|.||.+... |..|++|+..+.... . -++.+|+..
T Consensus 130 aSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~~Ea~N 209 (537)
T PRK04750 130 ASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLMREAAN 209 (537)
T ss_pred CCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHHHHHHH
Confidence 899999999985 788999988644210 0 123455555
Q ss_pred HhcCC----CCCccceEeEEEe-CCceeEEEecCCCCCHHhhhccCCCC----CCCHHHHHHHHHHHHHHHHHHHcCCCe
Q 014484 39 VGNLR----SERLANLIGCCYE-ADERLLVAEFMPNETLAKHLFHWETQ----PMKWAMRLRVALYLAQALEYCSSKGRA 109 (423)
Q Consensus 39 l~~l~----h~niv~~~~~~~~-~~~~~lv~e~~~~~~L~~~i~~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~~~i 109 (423)
+.++. +.+.+.+-.++.+ ....++||||+.|+++.++..-...+ .+....+..++.|++ ..| +
T Consensus 210 ~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif-------~~G-f 281 (537)
T PRK04750 210 ASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVF-------RDG-F 281 (537)
T ss_pred HHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHH-------hCC-e
Confidence 55552 3333444344432 44578999999999998743211111 233444444555554 478 9
Q ss_pred eeccCCCCCeeecCCC----CeEEccccccccCC
Q 014484 110 LYHDLNAYRILFDKDG----NPRLSSFGLMKNSR 139 (423)
Q Consensus 110 iH~dlkp~Nill~~~~----~~kl~Dfg~~~~~~ 139 (423)
+|+|++|.||+++.+| .++++|||++....
T Consensus 282 fHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 282 FHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred eeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 9999999999999888 89999999876543
|
|
| >PRK10370 formate-dependent nitrite reductase complex subunit NrfG; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=5.1e-10 Score=97.15 Aligned_cols=90 Identities=17% Similarity=0.140 Sum_probs=85.0
Q ss_pred cCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHH-HhCCC--hHHHH
Q 014484 331 AKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL-FSLGM--ENDAR 407 (423)
Q Consensus 331 ~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~-~~~~~--~~~A~ 407 (423)
.++.++++..+.++++.+|+ +..+|.++|.+|..+|++++|+..|++|++++|+++..++.+|.++ ...|+ +++|+
T Consensus 52 ~~~~~~~i~~l~~~L~~~P~-~~~~w~~Lg~~~~~~g~~~~A~~a~~~Al~l~P~~~~~~~~lA~aL~~~~g~~~~~~A~ 130 (198)
T PRK10370 52 QQTPEAQLQALQDKIRANPQ-NSEQWALLGEYYLWRNDYDNALLAYRQALQLRGENAELYAALATVLYYQAGQHMTPQTR 130 (198)
T ss_pred chhHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCcHHHH
Confidence 67889999999999999999 9999999999999999999999999999999999999999999986 67787 59999
Q ss_pred HHHHHhhccccccC
Q 014484 408 ETLKDGTNLEAKKN 421 (423)
Q Consensus 408 ~~~~~al~l~~~~~ 421 (423)
+.++++++++|++.
T Consensus 131 ~~l~~al~~dP~~~ 144 (198)
T PRK10370 131 EMIDKALALDANEV 144 (198)
T ss_pred HHHHHHHHhCCCCh
Confidence 99999999999863
|
|
| >TIGR02521 type_IV_pilW type IV pilus biogenesis/stability protein PilW | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.1e-09 Score=97.39 Aligned_cols=100 Identities=13% Similarity=0.059 Sum_probs=79.6
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcC--CCchHHHHHHHHH
Q 014484 319 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVS--PDWPTALYLQAAC 396 (423)
Q Consensus 319 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~--p~~~~a~~~~g~~ 396 (423)
..+...|..++..|++++|++.|+++++.+|. +..++.++|.++...|++++|+..+++++... |.....++.+|.+
T Consensus 66 ~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~ 144 (234)
T TIGR02521 66 LAYLALALYYQQLGELEKAEDSFRRALTLNPN-NGDVLNNYGTFLCQQGKYEQAMQQFEQAIEDPLYPQPARSLENAGLC 144 (234)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHcccHHHHHHHHHHHHhccccccchHHHHHHHHH
Confidence 35556778888888888888888888888887 77888888888888888888888888887753 4566778888888
Q ss_pred HHhCCChHHHHHHHHHhhccccc
Q 014484 397 LFSLGMENDARETLKDGTNLEAK 419 (423)
Q Consensus 397 ~~~~~~~~~A~~~~~~al~l~~~ 419 (423)
+..+|++++|+..|+++++.+|.
T Consensus 145 ~~~~g~~~~A~~~~~~~~~~~~~ 167 (234)
T TIGR02521 145 ALKAGDFDKAEKYLTRALQIDPQ 167 (234)
T ss_pred HHHcCCHHHHHHHHHHHHHhCcC
Confidence 88888888888888888877765
|
Members of this family are designated PilF in ref (PubMed:8973346) and PilW in ref (PubMed:15612916). This outer membrane protein is required both for pilus stability and for pilus function such as adherence to human cells. Members of this family contain copies of the TPR (tetratricopeptide repeat) domain. |
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=99.11 E-value=3.9e-10 Score=96.69 Aligned_cols=98 Identities=11% Similarity=0.170 Sum_probs=76.2
Q ss_pred HHHHHHHhcCC--CCCccceEeEEEeCCceeEEEecCCCCCHHh-hhccCCCCCCCHHHHHHHHHHHHHHHHHH-HcCCC
Q 014484 33 LEEAKAVGNLR--SERLANLIGCCYEADERLLVAEFMPNETLAK-HLFHWETQPMKWAMRLRVALYLAQALEYC-SSKGR 108 (423)
Q Consensus 33 ~~E~~~l~~l~--h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~-~i~~~~~~~~~~~~~~~i~~qi~~~l~~l-H~~~~ 108 (423)
.+|++.|+++. .-+++..+++ ...++||||+.+..+.. .++ ...++......+..+++.+|..| |..|
T Consensus 74 ~kE~r~L~rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lk---d~~~~~~~~~~i~~~i~~~l~~l~H~~g- 145 (197)
T cd05146 74 EKEMHNLKRMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLK---DAKLNDEEMKNAYYQVLSMMKQLYKECN- 145 (197)
T ss_pred HHHHHHHHHHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhh---ccccCHHHHHHHHHHHHHHHHHHHHhCC-
Confidence 48999999994 3567777765 45689999997653322 222 22455667778899999999998 8899
Q ss_pred eeeccCCCCCeeecCCCCeEEccccccccCC
Q 014484 109 ALYHDLNAYRILFDKDGNPRLSSFGLMKNSR 139 (423)
Q Consensus 109 iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 139 (423)
+|||||++.||+++ ++.+.|+|||.+....
T Consensus 146 lVHGDLs~~NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 146 LVHADLSEYNMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred eecCCCCHHHEEEE-CCcEEEEECCCceeCC
Confidence 99999999999997 4679999999887654
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.2e-09 Score=99.04 Aligned_cols=129 Identities=11% Similarity=0.043 Sum_probs=93.4
Q ss_pred cceeeeecceeeeeecCCChhh------------HHHHHHHHHHHhcCCCCC--ccceEeEEEeC-----CceeEEEecC
Q 014484 7 KFSICWFHCHLKSSVLESSDLG------------ETLNLEEAKAVGNLRSER--LANLIGCCYEA-----DERLLVAEFM 67 (423)
Q Consensus 7 v~~~~~~~~~~~~~~~~~~~~~------------~~~~~~E~~~l~~l~h~n--iv~~~~~~~~~-----~~~~lv~e~~ 67 (423)
|++..+.+..+.+|......-. ...+.+|...+..|...+ ++....+++.. ..-++|||++
T Consensus 38 vvr~~~~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte~l 117 (268)
T PRK15123 38 TLRFELAGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITEDL 117 (268)
T ss_pred EEEEEECCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEeeC
Confidence 4444444566666655332211 114778999998884333 45555566542 2468999999
Q ss_pred CCC-CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecC-------CCCeEEccccccc
Q 014484 68 PNE-TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK-------DGNPRLSSFGLMK 136 (423)
Q Consensus 68 ~~~-~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~-------~~~~kl~Dfg~~~ 136 (423)
++. +|.+++.+......+......++.+++..+.-||++| |+|+|+++.|||++. ++.+.|+||+.+.
T Consensus 118 ~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~G-i~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~ 193 (268)
T PRK15123 118 APTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAG-INHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ 193 (268)
T ss_pred CCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCc-CccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence 886 8999885433345667788899999999999999999 999999999999975 4578999999774
|
|
| >PRK12370 invasion protein regulator; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=7.6e-10 Score=111.84 Aligned_cols=97 Identities=11% Similarity=-0.052 Sum_probs=83.4
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHh
Q 014484 320 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFS 399 (423)
Q Consensus 320 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~ 399 (423)
.+...|..+...|++++|+..|++|++++|+ ++.+++++|.++...|++++|+..+++|++++|+++.+++.++.+++.
T Consensus 340 a~~~lg~~~~~~g~~~~A~~~~~~Al~l~P~-~~~a~~~lg~~l~~~G~~~eAi~~~~~Al~l~P~~~~~~~~~~~~~~~ 418 (553)
T PRK12370 340 ALGLLGLINTIHSEYIVGSLLFKQANLLSPI-SADIKYYYGWNLFMAGQLEEALQTINECLKLDPTRAAAGITKLWITYY 418 (553)
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCChhhHHHHHHHHHh
Confidence 3445688888889999999999999999998 888899999999999999999999999999999988887777877888
Q ss_pred CCChHHHHHHHHHhhccc
Q 014484 400 LGMENDARETLKDGTNLE 417 (423)
Q Consensus 400 ~~~~~~A~~~~~~al~l~ 417 (423)
+|++++|+..++++++.+
T Consensus 419 ~g~~eeA~~~~~~~l~~~ 436 (553)
T PRK12370 419 HTGIDDAIRLGDELRSQH 436 (553)
T ss_pred ccCHHHHHHHHHHHHHhc
Confidence 899999999998888664
|
|
| >TIGR03302 OM_YfiO outer membrane assembly lipoprotein YfiO | Back alignment and domain information |
|---|
Probab=99.09 E-value=6.7e-10 Score=99.78 Aligned_cols=103 Identities=17% Similarity=0.220 Sum_probs=94.8
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcH---HHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchH---HH
Q 014484 317 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSP---TVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPT---AL 390 (423)
Q Consensus 317 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~---~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~---a~ 390 (423)
.+..++..|..++..|+|++|+..|++++..+|. ++ .+++.+|.++...|++++|+..++++++.+|+++. ++
T Consensus 32 ~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~a~~~la~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~ 110 (235)
T TIGR03302 32 PAEELYEEAKEALDSGDYTEAIKYFEALESRYPF-SPYAEQAQLDLAYAYYKSGDYAEAIAAADRFIRLHPNHPDADYAY 110 (235)
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-chhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCchHHHH
Confidence 3456788999999999999999999999999998 55 68899999999999999999999999999998887 79
Q ss_pred HHHHHHHHhC--------CChHHHHHHHHHhhcccccc
Q 014484 391 YLQAACLFSL--------GMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 391 ~~~g~~~~~~--------~~~~~A~~~~~~al~l~~~~ 420 (423)
+.+|.++..+ |++++|++.|+++++.+|..
T Consensus 111 ~~~g~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~ 148 (235)
T TIGR03302 111 YLRGLSNYNQIDRVDRDQTAAREAFEAFQELIRRYPNS 148 (235)
T ss_pred HHHHHHHHHhcccccCCHHHHHHHHHHHHHHHHHCCCC
Confidence 9999999987 89999999999999998875
|
Members of this protein family include YfiO, a near-essential protein of the outer membrane, part of a complex involved in protein insertion into the bacterial outer membrane. Many proteins in this family are annotated as ComL, based on the involvement of this protein in natural transformation with exogenous DNA in Neisseria gonorrhoeae. This protein family shows sequence similarity to, but is distinct from, the tol-pal system protein YbgF (TIGR02795). |
| >COG5010 TadD Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.3e-09 Score=94.59 Aligned_cols=98 Identities=16% Similarity=0.043 Sum_probs=92.4
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHh
Q 014484 320 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFS 399 (423)
Q Consensus 320 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~ 399 (423)
.+..+|...++.|+|.+|+..+.++..++|+ +..+|+.+|.+|.+.|++++|-..|.+|+++.|+++.+..|+|..|+.
T Consensus 102 ll~~~gk~~~~~g~~~~A~~~~rkA~~l~p~-d~~~~~~lgaaldq~Gr~~~Ar~ay~qAl~L~~~~p~~~nNlgms~~L 180 (257)
T COG5010 102 LLAAQGKNQIRNGNFGEAVSVLRKAARLAPT-DWEAWNLLGAALDQLGRFDEARRAYRQALELAPNEPSIANNLGMSLLL 180 (257)
T ss_pred HHHHHHHHHHHhcchHHHHHHHHHHhccCCC-ChhhhhHHHHHHHHccChhHHHHHHHHHHHhccCCchhhhhHHHHHHH
Confidence 3445899999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHhhcccc
Q 014484 400 LGMENDARETLKDGTNLEA 418 (423)
Q Consensus 400 ~~~~~~A~~~~~~al~l~~ 418 (423)
.||++.|...+.++....+
T Consensus 181 ~gd~~~A~~lll~a~l~~~ 199 (257)
T COG5010 181 RGDLEDAETLLLPAYLSPA 199 (257)
T ss_pred cCCHHHHHHHHHHHHhCCC
Confidence 9999999999999875443
|
|
| >KOG1126 consensus DNA-binding cell division cycle control protein [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.08 E-value=6.6e-10 Score=107.44 Aligned_cols=98 Identities=13% Similarity=0.140 Sum_probs=61.8
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHhCC
Q 014484 322 KKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLG 401 (423)
Q Consensus 322 ~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~ 401 (423)
...|.+.....+|+.|..+|++||..+|+ ++.||+.+|.+|+++++++.|.-.|++|++++|.+.......|.++.++|
T Consensus 459 TLlGhE~~~~ee~d~a~~~fr~Al~~~~r-hYnAwYGlG~vy~Kqek~e~Ae~~fqkA~~INP~nsvi~~~~g~~~~~~k 537 (638)
T KOG1126|consen 459 TLLGHESIATEEFDKAMKSFRKALGVDPR-HYNAWYGLGTVYLKQEKLEFAEFHFQKAVEINPSNSVILCHIGRIQHQLK 537 (638)
T ss_pred hhcCChhhhhHHHHhHHHHHHhhhcCCch-hhHHHHhhhhheeccchhhHHHHHHHhhhcCCccchhHHhhhhHHHHHhh
Confidence 34555555666666666666666666666 66666666666666666666666666666666666666666666666666
Q ss_pred ChHHHHHHHHHhhcccccc
Q 014484 402 MENDARETLKDGTNLEAKK 420 (423)
Q Consensus 402 ~~~~A~~~~~~al~l~~~~ 420 (423)
+.++|+..|++|+.+||++
T Consensus 538 ~~d~AL~~~~~A~~ld~kn 556 (638)
T KOG1126|consen 538 RKDKALQLYEKAIHLDPKN 556 (638)
T ss_pred hhhHHHHHHHHHHhcCCCC
Confidence 6666666666666666653
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.1e-10 Score=118.52 Aligned_cols=187 Identities=19% Similarity=0.184 Sum_probs=142.1
Q ss_pred CCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeec
Q 014484 43 RSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFD 122 (423)
Q Consensus 43 ~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~ 122 (423)
.+|-+++..-.+.-....+++++|+.|++|...+.. -+..+.+-....+..+..++++||+.. ++|+|++|.|++..
T Consensus 862 ~~P~v~~~~~s~~~rsP~~L~~~~~~~~~~~Skl~~--~~~~saepaRs~i~~~vqs~e~L~s~~-r~h~~~~p~~~l~~ 938 (1205)
T KOG0606|consen 862 RSPAVVRSFPSFPCRSPLPLVGHYLNGGDLPSKLHN--SGCLSAEPARSPILERVQSLESLHSSL-RKHRDLKPDSLLIA 938 (1205)
T ss_pred CCCceecccCCCCCCCCcchhhHHhccCCchhhhhc--CCCcccccccchhHHHHhhhhccccch-hhcccccccchhhc
Confidence 345555555555566778999999999999988853 335677777778888999999999998 99999999999999
Q ss_pred CCCCeEEccccccccCCC-----------------------------------CCccccCcccCCccccccCCCCCCcce
Q 014484 123 KDGNPRLSSFGLMKNSRD-----------------------------------GKSYSTNLAFTPPEYMRTGRVTPESVV 167 (423)
Q Consensus 123 ~~~~~kl~Dfg~~~~~~~-----------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~Di 167 (423)
.+|+.++.|||....... .....+|+.|.+||...+..-...+|+
T Consensus 939 ~~gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~ 1018 (1205)
T KOG0606|consen 939 YDGHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADW 1018 (1205)
T ss_pred ccCCcccCccccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchh
Confidence 999999999983321110 012246899999999999999999999
Q ss_pred ehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCC-CChhHHHHHHHHHHHhcccCcCCCCCHH
Q 014484 168 YSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGH-FSNDEGTELVRLASRCLQSEARERPNAK 236 (423)
Q Consensus 168 ~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dp~~Rps~~ 236 (423)
|+.|++++|.++|.+||.... ..+.+..+......+. .+...+.+..+++.+.+..+|.+|-.+.
T Consensus 1019 ~~~g~~l~e~l~g~pp~na~t----pq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1019 WSSGVCLFEVLTGIPPFNAET----PQQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred hhhhhhhhhhhcCCCCCCCcc----hhhhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 999999999999998876642 2233333333322222 2344678899999999999999997665
|
|
| >COG3063 PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.6e-09 Score=92.15 Aligned_cols=100 Identities=15% Similarity=0.083 Sum_probs=93.0
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhc--CCCchHHHHHHHHHH
Q 014484 320 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVV--SPDWPTALYLQAACL 397 (423)
Q Consensus 320 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l--~p~~~~a~~~~g~~~ 397 (423)
.+.-.|..+-+.|+.+.|-+.|++|+.++|+ +..+++|-|.-+..+|+|++|...|++|+.. .|.-+..|-|+|.|-
T Consensus 71 a~~~~A~~Yq~~Ge~~~A~e~YrkAlsl~p~-~GdVLNNYG~FLC~qg~~~eA~q~F~~Al~~P~Y~~~s~t~eN~G~Ca 149 (250)
T COG3063 71 AHLVRAHYYQKLGENDLADESYRKALSLAPN-NGDVLNNYGAFLCAQGRPEEAMQQFERALADPAYGEPSDTLENLGLCA 149 (250)
T ss_pred HHHHHHHHHHHcCChhhHHHHHHHHHhcCCC-ccchhhhhhHHHHhCCChHHHHHHHHHHHhCCCCCCcchhhhhhHHHH
Confidence 5556788888999999999999999999999 9999999999999999999999999999875 567788999999999
Q ss_pred HhCCChHHHHHHHHHhhcccccc
Q 014484 398 FSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 398 ~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
+++|+++.|.+.|+++|++||.+
T Consensus 150 l~~gq~~~A~~~l~raL~~dp~~ 172 (250)
T COG3063 150 LKAGQFDQAEEYLKRALELDPQF 172 (250)
T ss_pred hhcCCchhHHHHHHHHHHhCcCC
Confidence 99999999999999999999975
|
|
| >PRK10803 tol-pal system protein YbgF; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=2.4e-09 Score=96.61 Aligned_cols=100 Identities=10% Similarity=-0.015 Sum_probs=90.4
Q ss_pred HHHHHHHHH-HhcCCHHHHHHHHHHHhcCCCCCc---HHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCC---chHHHHH
Q 014484 320 NSKKHGDTA-FRAKDFSTAIDCYTQFIDGGTMVS---PTVYARRCLSYLMNDMPQEALGDAMQAQVVSPD---WPTALYL 392 (423)
Q Consensus 320 ~~~~~g~~~-~~~~~~~~A~~~~~~ai~~~p~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~---~~~a~~~ 392 (423)
..+..|..+ ++.|+|++|+..|++.++..|+ + +.+++.+|.+|+..|+|++|+..|+++++..|+ .+++++.
T Consensus 144 ~~Y~~A~~l~~~~~~y~~Ai~af~~fl~~yP~-s~~a~~A~y~LG~~y~~~g~~~~A~~~f~~vv~~yP~s~~~~dAl~k 222 (263)
T PRK10803 144 TDYNAAIALVQDKSRQDDAIVAFQNFVKKYPD-STYQPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFK 222 (263)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcC-CcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCcchhHHHHH
Confidence 445566666 6679999999999999999998 5 589999999999999999999999999999887 5889999
Q ss_pred HHHHHHhCCChHHHHHHHHHhhcccccc
Q 014484 393 QAACLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 393 ~g~~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
+|.++..+|++++|++.|+++++..|..
T Consensus 223 lg~~~~~~g~~~~A~~~~~~vi~~yP~s 250 (263)
T PRK10803 223 VGVIMQDKGDTAKAKAVYQQVIKKYPGT 250 (263)
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHCcCC
Confidence 9999999999999999999999988764
|
|
| >KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.04 E-value=2.7e-09 Score=101.12 Aligned_cols=212 Identities=17% Similarity=0.116 Sum_probs=147.5
Q ss_pred cceeee--ecceeeeeecCCChh-hHHHHHHHHHHHhcCCCCCccceEeEEEe----CCceeEEEecCCC-CCHHhhhcc
Q 014484 7 KFSICW--FHCHLKSSVLESSDL-GETLNLEEAKAVGNLRSERLANLIGCCYE----ADERLLVAEFMPN-ETLAKHLFH 78 (423)
Q Consensus 7 v~~~~~--~~~~~~~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~~lv~e~~~~-~~L~~~i~~ 78 (423)
.|+++. .|..+..+++..... .....-.-++.++++.|+|||.+.++|.. +..+++|++|.++ ++|.+.-..
T Consensus 292 tyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~F~ 371 (655)
T KOG3741|consen 292 TYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLYFA 371 (655)
T ss_pred eEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHHcc
Confidence 444443 255566666522221 11122244788999999999999999973 3458999999887 577776542
Q ss_pred C-------------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCCccc
Q 014484 79 W-------------ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYS 145 (423)
Q Consensus 79 ~-------------~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 145 (423)
+ ++...+++.+|.++.|+..||.++|+.| +.-+-|.|.+|+++.+.+++|+..|+........
T Consensus 372 ~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssG-LAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d~--- 447 (655)
T KOG3741|consen 372 NPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSG-LACKTLDLKKILVTGKMRIRISGCGIMDVLQEDP--- 447 (655)
T ss_pred CCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcC-ceeecccHhHeEeeCcceEEEecccceeeecCCC---
Confidence 2 2345788999999999999999999999 9999999999999999899998888754433222
Q ss_pred cCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhc
Q 014484 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCL 225 (423)
Q Consensus 146 ~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 225 (423)
+ +-+. --.+-|.=.||.+++-|.||..-... ...........+...++.+++++|....
T Consensus 448 ~-------~~le---~~Qq~D~~~lG~ll~aLAt~~~ns~~-----------~d~~~~s~~~~I~~~yS~D~rn~v~yl~ 506 (655)
T KOG3741|consen 448 T-------EPLE---SQQQNDLRDLGLLLLALATGTENSNR-----------TDSTQSSHLTRITTTYSTDLRNVVEYLE 506 (655)
T ss_pred C-------cchh---HHhhhhHHHHHHHHHHHhhccccccc-----------ccchHHHHHHHhhhhhhHHHHHHHHHHH
Confidence 0 1111 12357888999999999999632111 0111111112234567889999999999
Q ss_pred ccCcCCCCCHHHHHHHHHh
Q 014484 226 QSEARERPNAKSLVISLMS 244 (423)
Q Consensus 226 ~~dp~~Rps~~~vl~~l~~ 244 (423)
..++++ -++.+++.++..
T Consensus 507 s~~~~~-ksI~~llp~~~~ 524 (655)
T KOG3741|consen 507 SLNFRE-KSIQDLLPMIGS 524 (655)
T ss_pred hcCccc-ccHHHHHHHHHH
Confidence 999987 799999977643
|
|
| >PRK11189 lipoprotein NlpI; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.3e-09 Score=101.11 Aligned_cols=89 Identities=17% Similarity=0.082 Sum_probs=82.2
Q ss_pred CCHHHHHHHHHHHhc---CCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHhCCChHHHHH
Q 014484 332 KDFSTAIDCYTQFID---GGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARE 408 (423)
Q Consensus 332 ~~~~~A~~~~~~ai~---~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~ 408 (423)
+..+.++..++++|. ++|...+.+|+++|.+|...|++++|+.+|++|++++|+++.+|+.+|.++..+|++++|++
T Consensus 40 ~~~e~~i~~~~~~l~~~~~~~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~Al~l~P~~~~a~~~lg~~~~~~g~~~~A~~ 119 (296)
T PRK11189 40 LQQEVILARLNQILASRDLTDEERAQLHYERGVLYDSLGLRALARNDFSQALALRPDMADAYNYLGIYLTQAGNFDAAYE 119 (296)
T ss_pred hHHHHHHHHHHHHHccccCCcHhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCCCHHHHHH
Confidence 466889999999996 55654578999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccccc
Q 014484 409 TLKDGTNLEAKK 420 (423)
Q Consensus 409 ~~~~al~l~~~~ 420 (423)
.|++|++++|..
T Consensus 120 ~~~~Al~l~P~~ 131 (296)
T PRK11189 120 AFDSVLELDPTY 131 (296)
T ss_pred HHHHHHHhCCCC
Confidence 999999999974
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 423 | ||||
| 3tl8_A | 349 | The Avrptob-Bak1 Complex Reveals Two Structurally S | 5e-17 | ||
| 3uim_A | 326 | Structural Basis For The Impact Of Phosphorylation | 5e-17 | ||
| 3hgk_A | 327 | Crystal Structure Of Effect Protein Avrptob Complex | 7e-17 | ||
| 2qkw_B | 321 | Structural Basis For Activation Of Plant Immunity B | 2e-16 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 9e-15 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 9e-15 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 9e-15 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 7e-13 | ||
| 3k54_A | 283 | Structures Of Human Bruton's Tyrosine Kinase In Act | 1e-11 | ||
| 3ocs_A | 271 | Crystal Structure Of Bruton's Tyrosine Kinase In Co | 2e-11 | ||
| 3pix_A | 274 | Crystal Structure Of Btk Kinase Domain Complexed Wi | 2e-11 | ||
| 1k2p_A | 263 | Crystal Structure Of Bruton's Tyrosine Kinase Domai | 2e-11 | ||
| 3p08_A | 267 | Crystal Structure Of The Human Btk Kinase Domain Le | 2e-11 | ||
| 3gen_A | 283 | The 1.6 A Crystal Structure Of Human Bruton's Tyros | 2e-11 | ||
| 3oct_A | 265 | Crystal Structure Of Bruton's Tyrosine Kinase Mutan | 2e-11 | ||
| 1byg_A | 278 | Kinase Domain Of Human C-Terminal Src Kinase (Csk) | 1e-08 | ||
| 3d7u_A | 263 | Structural Basis For The Recognition Of C-Src By It | 1e-08 | ||
| 1k9a_A | 450 | Crystal Structure Analysis Of Full-Length Carboxyl- | 2e-08 | ||
| 2g15_A | 318 | Structural Characterization Of Autoinhibited C-Met | 2e-08 | ||
| 2wd1_A | 292 | Human C-Met Kinase In Complex With Azaindole Inhibi | 2e-08 | ||
| 3q6u_A | 308 | Structure Of The Apo Met Receptor Kinase In The Dua | 2e-08 | ||
| 3d7t_A | 269 | Structural Basis For The Recognition Of C-Src By It | 2e-08 | ||
| 3lq8_A | 302 | Structure Of The Kinase Domain Of C-Met Bound To Xl | 2e-08 | ||
| 3i5n_A | 309 | Crystal Structure Of C-Met With Triazolopyridazine | 2e-08 | ||
| 2wgj_A | 306 | X-Ray Structure Of Pf-02341066 Bound To The Kinase | 2e-08 | ||
| 4gg5_A | 319 | Crystal Structure Of Cmet In Complex With Novel Inh | 3e-08 | ||
| 2rfn_A | 310 | X-ray Structure Of C-met With Inhibitor. Length = 3 | 3e-08 | ||
| 3f66_A | 298 | Human C-Met Kinase In Complex With Quinoxaline Inhi | 3e-08 | ||
| 3nyx_A | 302 | Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T | 2e-07 | ||
| 3nz0_A | 302 | Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3 | 3e-07 | ||
| 4fk3_A | 292 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 5e-07 | ||
| 3c4c_A | 280 | B-Raf Kinase In Complex With Plx4720 Length = 280 | 6e-07 | ||
| 2hiw_A | 287 | Crystal Structure Of Inactive Conformation Abl Kina | 6e-07 | ||
| 3og7_A | 289 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 6e-07 | ||
| 2g1t_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 7e-07 | ||
| 2e2b_A | 293 | Crystal Structure Of The C-Abl Kinase Domain In Com | 7e-07 | ||
| 3pyy_A | 298 | Discovery And Characterization Of A Cell-Permeable, | 7e-07 | ||
| 4h58_A | 275 | Braf In Complex With Compound 3 Length = 275 | 7e-07 | ||
| 3oxz_A | 284 | Crystal Structure Of Abl Kinase Domain Bound With A | 8e-07 | ||
| 1uwj_A | 276 | The Complex Of Mutant V599e B-raf And Bay439006 Len | 8e-07 | ||
| 1fpu_A | 293 | Crystal Structure Of Abl Kinase Domain In Complex W | 8e-07 | ||
| 2fb8_A | 281 | Structure Of The B-Raf Kinase Domain Bound To Sb-59 | 8e-07 | ||
| 2qoh_A | 288 | Crystal Structure Of Abl Kinase Bound With Ppy-a Le | 8e-07 | ||
| 3q96_A | 282 | B-Raf Kinase Domain In Complex With A Tetrahydronap | 9e-07 | ||
| 4dbn_A | 284 | Crystal Structure Of The Kinase Domain Of Human B-R | 9e-07 | ||
| 2z60_A | 288 | Crystal Structure Of The T315i Mutant Of Abl Kinase | 9e-07 | ||
| 3idp_A | 300 | B-Raf V600e Kinase Domain In Complex With An Aminoi | 1e-06 | ||
| 4asz_A | 299 | Crystal Structure Of Apo Trkb Kinase Domain Length | 1e-06 | ||
| 4g9r_A | 307 | B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr | 1e-06 | ||
| 3d4q_A | 307 | Pyrazole-Based Inhibitors Of B-Raf Kinase Length = | 1e-06 | ||
| 3ii5_A | 306 | The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi | 1e-06 | ||
| 3oy3_A | 284 | Crystal Structure Of Abl T315i Mutant Kinase Domain | 1e-06 | ||
| 1uwh_A | 276 | The Complex Of Wild Type B-Raf And Bay439006 Length | 1e-06 | ||
| 3miy_A | 266 | X-Ray Crystal Structure Of Itk Complexed With Sunit | 1e-06 | ||
| 3qri_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain I | 1e-06 | ||
| 2hzi_A | 277 | Abl Kinase Domain In Complex With Pd180970 Length = | 1e-06 | ||
| 2hyy_A | 273 | Human Abl Kinase Domain In Complex With Imatinib (S | 1e-06 | ||
| 2f4j_A | 287 | Structure Of The Kinase Domain Of An Imatinib-Resis | 1e-06 | ||
| 3t9t_A | 267 | Crystal Structure Of Btk Mutant (F435t,K596r) Compl | 1e-06 | ||
| 2hz0_A | 270 | Abl Kinase Domain In Complex With Nvp-Aeg082 Length | 1e-06 | ||
| 2g2f_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 1e-06 | ||
| 3qrj_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain T | 1e-06 | ||
| 1qpd_A | 279 | Structural Analysis Of The Lymphocyte-specific Kina | 2e-06 | ||
| 3q52_A | 306 | Structure Of Phosphorylated Pak1 Kinase Domain Leng | 2e-06 | ||
| 1sm2_A | 264 | Crystal Structure Of The Phosphorylated Interleukin | 2e-06 | ||
| 3lxn_A | 318 | Structural And Thermodynamic Characterization Of Th | 2e-06 | ||
| 3qgw_A | 286 | Crystal Structure Of Itk Kinase Bound To An Inhibit | 2e-06 | ||
| 4f0f_A | 287 | Crystal Structure Of The Roco4 Kinase Domain Bound | 2e-06 | ||
| 3v5j_A | 266 | Crystal Structure Of Interleukin-2 Inducible T-Cell | 2e-06 | ||
| 3pls_A | 298 | Ron In Complex With Ligand Amp-Pnp Length = 298 | 2e-06 | ||
| 4hct_A | 269 | Crystal Structure Of Itk In Complex With Compound 5 | 2e-06 | ||
| 2og8_A | 265 | Crystal Structure Of Aminoquinazoline 36 Bound To L | 2e-06 | ||
| 2dq7_X | 283 | Crystal Structure Of Fyn Kinase Domain Complexed Wi | 2e-06 | ||
| 3kxz_A | 287 | The Complex Crystal Structure Of Lck With A Probe M | 2e-06 | ||
| 2zm1_A | 285 | Crystal Structure Of Imidazo Pyrazin 1 Bound To The | 2e-06 | ||
| 1qpe_A | 279 | Structural Analysis Of The Lymphocyte-Specific Kina | 3e-06 | ||
| 3kmm_A | 288 | Structure Of Human Lck Kinase With A Small Molecule | 3e-06 | ||
| 2pl0_A | 289 | Lck Bound To Imatinib Length = 289 | 3e-06 | ||
| 3bys_A | 277 | Co-Crystal Structure Of Lck And Aminopyrimidine Ami | 3e-06 | ||
| 1ksw_A | 452 | Structure Of Human C-Src Tyrosine Kinase (Thr338gly | 3e-06 | ||
| 3cd3_A | 377 | Crystal Structure Of Phosphorylated Human Feline Sa | 3e-06 | ||
| 2ofv_A | 277 | Crystal Structure Of Aminoquinazoline 1 Bound To Lc | 3e-06 | ||
| 3bym_A | 272 | X-Ray Co-Crystal Structure Aminobenzimidazole Triaz | 3e-06 | ||
| 1fmk_A | 452 | Crystal Structure Of Human Tyrosine-Protein Kinase | 3e-06 | ||
| 3lck_A | 271 | The Kinase Domain Of Human Lymphocyte Kinase (Lck), | 3e-06 | ||
| 3ugc_A | 295 | Structural Basis Of Jak2 Inhibition By The Type Ii | 3e-06 | ||
| 2ofu_A | 273 | X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam | 3e-06 | ||
| 2fo0_A | 495 | Organization Of The Sh3-Sh2 Unit In Active And Inac | 3e-06 | ||
| 2of2_A | 271 | Crystal Structure Of Furanopyrimidine 8 Bound To Lc | 3e-06 | ||
| 1y57_A | 452 | Structure Of Unphosphorylated C-Src In Complex With | 3e-06 | ||
| 4fvr_A | 289 | Crystal Structure Of The Jak2 Pseudokinase Domain M | 3e-06 | ||
| 2h8h_A | 535 | Src Kinase In Complex With A Quinazoline Inhibitor | 3e-06 | ||
| 3bkb_A | 377 | Crystal Structure Of Human Feline Sarcoma Viral Onc | 3e-06 | ||
| 3gvu_A | 292 | The Crystal Structure Of Human Abl2 In Complex With | 3e-06 | ||
| 1opl_A | 537 | Structural Basis For The Auto-Inhibition Of C-Abl T | 4e-06 | ||
| 4e6d_A | 298 | Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W | 4e-06 | ||
| 1opk_A | 495 | Structural Basis For The Auto-Inhibition Of C-Abl T | 4e-06 | ||
| 1yi6_A | 276 | C-Term Tail Segment Of Human Tyrosine Kinase (258-5 | 4e-06 | ||
| 2bdf_A | 279 | Src Kinase In Complex With Inhibitor Ap23451 Length | 4e-06 | ||
| 3fxz_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Ruthen | 4e-06 | ||
| 2v7a_A | 286 | Crystal Structure Of The T315i Abl Mutant In Comple | 5e-06 | ||
| 3q4z_A | 306 | Structure Of Unphosphorylated Pak1 Kinase Domain Le | 5e-06 | ||
| 4bbe_A | 298 | Aminoalkylpyrimidine Inhibitor Complexes With Jak2 | 5e-06 | ||
| 2zv7_A | 279 | Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | 5e-06 | ||
| 2oiq_A | 286 | Crystal Structure Of Chicken C-Src Kinase Domain In | 5e-06 | ||
| 2gqg_A | 278 | X-Ray Crystal Structure Of Dasatinib (Bms-354825) B | 6e-06 | ||
| 3svv_A | 286 | Crystal Structure Of T338c C-Src Covalently Bound T | 6e-06 | ||
| 3dqw_A | 286 | C-Src Kinase Domain Thr338ile Mutant In Complex Wit | 6e-06 | ||
| 4f1o_A | 287 | Crystal Structure Of The L1180t Mutant Roco4 Kinase | 6e-06 | ||
| 3d7u_B | 277 | Structural Basis For The Recognition Of C-Src By It | 6e-06 | ||
| 1f3m_C | 297 | Crystal Structure Of Human SerineTHREONINE KINASE P | 6e-06 | ||
| 3dk3_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 7e-06 | ||
| 2ptk_A | 453 | Chicken Src Tyrosine Kinase Length = 453 | 7e-06 | ||
| 1yhv_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Two Po | 7e-06 | ||
| 3kxx_A | 317 | Structure Of The Mutant Fibroblast Growth Factor Re | 7e-06 | ||
| 3g6h_A | 286 | Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma | 7e-06 | ||
| 3u4w_A | 275 | Src In Complex With Dna-Templated Macrocyclic Inhib | 7e-06 | ||
| 3geq_A | 286 | Structural Basis For The Chemical Rescue Of Src Kin | 7e-06 | ||
| 4e1z_A | 291 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 8e-06 | ||
| 3s95_A | 310 | Crystal Structure Of The Human Limk1 Kinase Domain | 8e-06 | ||
| 2jed_A | 352 | The Crystal Structure Of The Kinase Domain Of The P | 8e-06 | ||
| 3mpm_A | 267 | Lck Complexed With A Pyrazolopyrimidine Length = 26 | 8e-06 | ||
| 3oez_A | 286 | Crystal Structure Of The L317i Mutant Of The Chicke | 8e-06 | ||
| 4e20_A | 290 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 9e-06 | ||
| 2w1i_A | 326 | Structure Determination Of Aurora Kinase In Complex | 9e-06 | ||
| 1xjd_A | 345 | Crystal Structure Of Pkc-Theta Complexed With Staur | 1e-05 | ||
| 2hwo_A | 286 | Crystal Structure Of Src Kinase Domain In Complex W | 1e-05 | ||
| 2b7a_A | 293 | The Structural Basis Of Janus Kinase 2 Inhibition B | 1e-05 | ||
| 3dk6_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 1e-05 | ||
| 3tjc_A | 298 | Co-Crystal Structure Of Jak2 With Thienopyridine 8 | 1e-05 | ||
| 2xa4_A | 298 | Inhibitors Of Jak2 Kinase Domain Length = 298 | 1e-05 | ||
| 4e4m_A | 302 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 3 | 1e-05 | ||
| 4hge_A | 300 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 | 1e-05 | ||
| 3io7_A | 313 | 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel | 1e-05 | ||
| 4f1m_A | 287 | Crystal Structure Of The G1179s Roco4 Kinase Domain | 1e-05 | ||
| 3lpb_A | 295 | Crystal Structure Of Jak2 Complexed With A Potent 2 | 1e-05 | ||
| 4el9_A | 305 | Structure Of N-Terminal Kinase Domain Of Rsk2 With | 1e-05 | ||
| 1yoj_A | 283 | Crystal Structure Of Src Kinase Domain Length = 283 | 1e-05 | ||
| 4fvp_A | 289 | Crystal Structure Of The Jak2 Pseudokinase Domain ( | 1e-05 | ||
| 3q32_A | 301 | Structure Of Janus Kinase 2 With A Pyrrolotriazine | 1e-05 | ||
| 3a4o_X | 286 | Lyn Kinase Domain Length = 286 | 1e-05 | ||
| 1yol_A | 283 | Crystal Structure Of Src Kinase Domain In Complex W | 1e-05 | ||
| 4aqc_A | 301 | Triazolopyridine-Based Inhibitor Of Janus Kinase 2 | 1e-05 | ||
| 3jy9_A | 311 | Janus Kinase 2 Inhibitors Length = 311 | 1e-05 | ||
| 3e62_A | 293 | Fragment Based Discovery Of Jak-2 Inhibitors Length | 1e-05 | ||
| 3ubd_A | 304 | Structure Of N-Terminal Domain Of Rsk2 Kinase In Co | 1e-05 | ||
| 2qq7_A | 286 | Crystal Structure Of Drug Resistant Src Kinase Doma | 1e-05 | ||
| 3dk7_A | 277 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 1e-05 | ||
| 3rvg_A | 303 | Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido | 1e-05 | ||
| 3g51_A | 325 | Structural Diversity Of The Active Conformation Of | 2e-05 | ||
| 3gqi_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 2e-05 | ||
| 3txo_A | 353 | Pkc Eta Kinase In Complex With A Naphthyridine Leng | 2e-05 | ||
| 3aln_A | 327 | Crystal Structure Of Human Non-Phosphorylated Mkk4 | 2e-05 | ||
| 2bva_A | 292 | Crystal Structure Of The Human P21-Activated Kinase | 2e-05 | ||
| 2x4z_A | 296 | Crystal Structure Of The Human P21-Activated Kinase | 2e-05 | ||
| 2q0n_A | 301 | Structure Of Human P21 Activating Kinase 4 (Pak4) I | 2e-05 | ||
| 2cdz_A | 303 | Crystal Structure Of The Human P21-Activated Kinase | 2e-05 | ||
| 3v5q_A | 297 | Discovery Of A Selective Trk Inhibitor With Efficac | 2e-05 | ||
| 3zgw_A | 347 | Crystal Structure Of Maternal Embryonic Leucine Zip | 2e-05 | ||
| 3tt0_A | 382 | Co-Structure Of Fibroblast Growth Factor Receptor 1 | 2e-05 | ||
| 4f63_A | 309 | Crystal Structure Of Human Fibroblast Growth Factor | 3e-05 | ||
| 2yjr_A | 342 | Structure Of F1174l Mutant Anaplastic Lymphoma Kina | 3e-05 | ||
| 3rhx_B | 306 | Crystal Structure Of The Catalytic Domain Of Fgfr1 | 3e-05 | ||
| 4fnw_A | 327 | Crystal Structure Of The Apo F1174l Anaplastic Lymp | 3e-05 | ||
| 2xik_A | 294 | Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K | 3e-05 | ||
| 3js2_A | 317 | Crystal Structure Of Minimal Kinase Domain Of Fibro | 3e-05 | ||
| 1fgk_A | 310 | Crystal Structure Of The Tyrosine Kinase Domain Of | 3e-05 | ||
| 3c4f_A | 302 | Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M | 3e-05 | ||
| 4fif_A | 346 | Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid | 3e-05 | ||
| 3gql_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 3e-05 | ||
| 2pzr_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 4e-05 | ||
| 4fie_A | 423 | Full-Length Human Pak4 Length = 423 | 4e-05 | ||
| 2yfx_A | 327 | Structure Of L1196m Mutant Anaplastic Lymphoma Kina | 4e-05 | ||
| 2qon_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 4e-05 | ||
| 3cly_A | 334 | Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase | 4e-05 | ||
| 3dzq_A | 361 | Human Epha3 Kinase Domain In Complex With Inhibitor | 5e-05 | ||
| 2qok_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 5e-05 | ||
| 2yhv_A | 342 | Structure Of L1196m Mutant Anaplastic Lymphoma Kina | 5e-05 | ||
| 3nyn_A | 576 | Crystal Structure Of G Protein-Coupled Receptor Kin | 5e-05 | ||
| 2qoc_A | 344 | Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp | 5e-05 | ||
| 2acx_A | 576 | Crystal Structure Of G Protein Coupled Receptor Kin | 5e-05 | ||
| 2xp2_A | 327 | Structure Of The Human Anaplastic Lymphoma Kinase I | 5e-05 | ||
| 3b2t_A | 311 | Structure Of Phosphotransferase Length = 311 | 5e-05 | ||
| 2xb7_A | 315 | Structure Of Human Anaplastic Lymphoma Kinase In Co | 5e-05 | ||
| 3fxx_A | 371 | Human Epha3 Kinase And Juxtamembrane Region Bound T | 6e-05 | ||
| 2gsf_A | 373 | The Human Epha3 Receptor Tyrosine Kinase And Juxtam | 6e-05 | ||
| 3aox_A | 344 | X-Ray Crystal Structure Of Human Anaplastic Lymphom | 6e-05 | ||
| 2qoi_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 6e-05 | ||
| 4fnz_A | 327 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 6e-05 | ||
| 3sxr_A | 268 | Crystal Structure Of Bmx Non-Receptor Tyrosine Kina | 6e-05 | ||
| 2qof_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f | 6e-05 | ||
| 2qod_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y602f | 6e-05 | ||
| 3lct_A | 344 | Crystal Structure Of The Anaplastic Lymphoma Kinase | 6e-05 | ||
| 3l9p_A | 367 | Crystal Structure Of The Anaplastic Lymphoma Kinase | 7e-05 | ||
| 2qoo_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 7e-05 | ||
| 4dce_A | 333 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 7e-05 | ||
| 2yjs_A | 342 | Structure Of C1156y Mutant Anaplastic Lymphoma Kina | 7e-05 | ||
| 2qol_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596:y | 7e-05 | ||
| 2hk5_A | 270 | Hck Kinase In Complex With Lck Targetted Inhibitor | 8e-05 | ||
| 4fob_A | 353 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 9e-05 | ||
| 2pvy_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 9e-05 | ||
| 1qcf_A | 454 | Crystal Structure Of Hck In Complex With A Src Fami | 9e-05 | ||
| 2pzp_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 9e-05 | ||
| 1gjo_A | 316 | The Fgfr2 Tyrosine Kinase Domain Length = 316 | 9e-05 | ||
| 3ri1_A | 313 | Crystal Structure Of The Catalytic Domain Of Fgfr2 | 1e-04 | ||
| 3dak_A | 290 | Crystal Structure Of Domain-Swapped Osr1 Kinase Dom | 1e-04 | ||
| 2vwi_A | 303 | Structure Of The Osr1 Kinase, A Hypertension Drug T | 1e-04 | ||
| 2psq_A | 370 | Crystal Structure Of Unphosphorylated Unactivated W | 1e-04 | ||
| 1rqq_A | 306 | Crystal Structure Of The Insulin Receptor Kinase In | 1e-04 | ||
| 1ad5_A | 438 | Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | 1e-04 | ||
| 1ir3_A | 306 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 1e-04 | ||
| 2pvf_A | 334 | Crystal Structure Of Tyrosine Phosphorylated Activa | 1e-04 | ||
| 2z8c_A | 303 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 1e-04 | ||
| 4fnx_A | 327 | Crystal Structure Of The Apo R1275q Anaplastic Lymp | 1e-04 | ||
| 2qob_A | 344 | Human Epha3 Kinase Domain, Base Structure Length = | 2e-04 | ||
| 3eta_A | 317 | Kinase Domain Of Insulin Receptor Complexed With A | 2e-04 | ||
| 2qo7_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Dephos | 2e-04 | ||
| 1irk_A | 306 | Crystal Structure Of The Tyrosine Kinase Domain Of | 2e-04 | ||
| 1i44_A | 306 | Crystallographic Studies Of An Activation Loop Muta | 2e-04 | ||
| 1fot_A | 318 | Structure Of The Unliganded Camp-Dependent Protein | 3e-04 | ||
| 2f57_A | 317 | Crystal Structure Of The Human P21-activated Kinase | 3e-04 | ||
| 3ppz_A | 309 | Crystal Structure Of Ctr1 Kinase Domain In Complex | 4e-04 | ||
| 3mn3_A | 271 | An Inhibited Conformation For The Protein Kinase Do | 4e-04 | ||
| 2rei_A | 318 | Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep | 4e-04 | ||
| 3hyh_A | 275 | Crystal Structure Of The Protein Kinase Domain Of Y | 5e-04 | ||
| 2fh9_A | 274 | Structure And Dimerization Of The Kinase Domain Fro | 5e-04 | ||
| 3dae_A | 283 | Crystal Structure Of Phosphorylated Snf1 Kinase Dom | 5e-04 | ||
| 4ejn_A | 446 | Crystal Structure Of Autoinhibited Form Of Akt1 In | 5e-04 | ||
| 2qnj_A | 328 | Kinase And Ubiquitin-Associated Domains Of Mark3PAR | 6e-04 | ||
| 3o96_A | 446 | Crystal Structure Of Human Akt1 With An Allosteric | 6e-04 | ||
| 2f2u_A | 402 | Crystal Structure Of The Rho-Kinase Kinase Domain L | 6e-04 | ||
| 1a17_A | 166 | Tetratricopeptide Repeats Of Protein Phosphatase 5 | 6e-04 | ||
| 3ekk_A | 307 | Insulin Receptor Kinase Complexed With An Inhibitor | 7e-04 | ||
| 1p14_A | 306 | Crystal Structure Of A Catalytic-Loop Mutant Of The | 7e-04 | ||
| 2z7q_A | 321 | Crystal Structure Of The N-Terminal Kinase Domain O | 7e-04 | ||
| 1wao_1 | 477 | Pp5 Structure Length = 477 | 9e-04 |
| >pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349 | Back alignment and structure |
|
| >pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326 | Back alignment and structure |
|
| >pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327 | Back alignment and structure |
|
| >pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283 | Back alignment and structure |
|
| >pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271 | Back alignment and structure |
|
| >pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274 | Back alignment and structure |
|
| >pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263 | Back alignment and structure |
|
| >pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267 | Back alignment and structure |
|
| >pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283 | Back alignment and structure |
|
| >pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265 | Back alignment and structure |
|
| >pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278 | Back alignment and structure |
|
| >pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263 | Back alignment and structure |
|
| >pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450 | Back alignment and structure |
|
| >pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318 | Back alignment and structure |
|
| >pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292 | Back alignment and structure |
|
| >pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308 | Back alignment and structure |
|
| >pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269 | Back alignment and structure |
|
| >pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302 | Back alignment and structure |
|
| >pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309 | Back alignment and structure |
|
| >pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306 | Back alignment and structure |
|
| >pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310 | Back alignment and structure |
|
| >pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302 | Back alignment and structure |
|
| >pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292 | Back alignment and structure |
|
| >pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280 | Back alignment and structure |
|
| >pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289 | Back alignment and structure |
|
| >pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293 | Back alignment and structure |
|
| >pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298 | Back alignment and structure |
|
| >pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275 | Back alignment and structure |
|
| >pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284 | Back alignment and structure |
|
| >pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281 | Back alignment and structure |
|
| >pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288 | Back alignment and structure |
|
| >pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282 | Back alignment and structure |
|
| >pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284 | Back alignment and structure |
|
| >pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288 | Back alignment and structure |
|
| >pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300 | Back alignment and structure |
|
| >pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299 | Back alignment and structure |
|
| >pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307 | Back alignment and structure |
|
| >pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306 | Back alignment and structure |
|
| >pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284 | Back alignment and structure |
|
| >pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266 | Back alignment and structure |
|
| >pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277 | Back alignment and structure |
|
| >pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277 | Back alignment and structure |
|
| >pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273 | Back alignment and structure |
|
| >pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287 | Back alignment and structure |
|
| >pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267 | Back alignment and structure |
|
| >pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270 | Back alignment and structure |
|
| >pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277 | Back alignment and structure |
|
| >pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264 | Back alignment and structure |
|
| >pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318 | Back alignment and structure |
|
| >pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266 | Back alignment and structure |
|
| >pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298 | Back alignment and structure |
|
| >pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269 | Back alignment and structure |
|
| >pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265 | Back alignment and structure |
|
| >pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283 | Back alignment and structure |
|
| >pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287 | Back alignment and structure |
|
| >pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285 | Back alignment and structure |
|
| >pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288 | Back alignment and structure |
|
| >pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289 | Back alignment and structure |
|
| >pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277 | Back alignment and structure |
|
| >pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452 | Back alignment and structure |
|
| >pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377 | Back alignment and structure |
|
| >pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277 | Back alignment and structure |
|
| >pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272 | Back alignment and structure |
|
| >pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452 | Back alignment and structure |
|
| >pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271 | Back alignment and structure |
|
| >pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295 | Back alignment and structure |
|
| >pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273 | Back alignment and structure |
|
| >pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271 | Back alignment and structure |
|
| >pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452 | Back alignment and structure |
|
| >pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant V617f (Mg- Atp-Bound Form) Length = 289 | Back alignment and structure |
|
| >pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535 | Back alignment and structure |
|
| >pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377 | Back alignment and structure |
|
| >pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292 | Back alignment and structure |
|
| >pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537 | Back alignment and structure |
|
| >pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298 | Back alignment and structure |
|
| >pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495 | Back alignment and structure |
|
| >pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276 | Back alignment and structure |
|
| >pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279 | Back alignment and structure |
|
| >pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297 | Back alignment and structure |
|
| >pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286 | Back alignment and structure |
|
| >pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298 | Back alignment and structure |
|
| >pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | Back alignment and structure |
|
| >pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286 | Back alignment and structure |
|
| >pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278 | Back alignment and structure |
|
| >pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286 | Back alignment and structure |
|
| >pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286 | Back alignment and structure |
|
| >pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287 | Back alignment and structure |
|
| >pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277 | Back alignment and structure |
|
| >pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297 | Back alignment and structure |
|
| >pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453 | Back alignment and structure |
|
| >pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297 | Back alignment and structure |
|
| >pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317 | Back alignment and structure |
|
| >pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286 | Back alignment and structure |
|
| >pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275 | Back alignment and structure |
|
| >pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286 | Back alignment and structure |
|
| >pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310 | Back alignment and structure |
|
| >pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352 | Back alignment and structure |
|
| >pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267 | Back alignment and structure |
|
| >pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286 | Back alignment and structure |
|
| >pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290 | Back alignment and structure |
|
| >pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345 | Back alignment and structure |
|
| >pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298 | Back alignment and structure |
|
| >pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300 | Back alignment and structure |
|
| >pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313 | Back alignment and structure |
|
| >pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295 | Back alignment and structure |
|
| >pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305 | Back alignment and structure |
|
| >pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo Form) Length = 289 | Back alignment and structure |
|
| >pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286 | Back alignment and structure |
|
| >pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283 | Back alignment and structure |
|
| >pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301 | Back alignment and structure |
|
| >pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311 | Back alignment and structure |
|
| >pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293 | Back alignment and structure |
|
| >pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304 | Back alignment and structure |
|
| >pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277 | Back alignment and structure |
|
| >pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303 | Back alignment and structure |
|
| >pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325 | Back alignment and structure |
|
| >pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353 | Back alignment and structure |
|
| >pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327 | Back alignment and structure |
|
| >pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292 | Back alignment and structure |
|
| >pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296 | Back alignment and structure |
|
| >pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301 | Back alignment and structure |
|
| >pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303 | Back alignment and structure |
|
| >pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297 | Back alignment and structure |
|
| >pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382 | Back alignment and structure |
|
| >pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309 | Back alignment and structure |
|
| >pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306 | Back alignment and structure |
|
| >pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327 | Back alignment and structure |
|
| >pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294 | Back alignment and structure |
|
| >pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317 | Back alignment and structure |
|
| >pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310 | Back alignment and structure |
|
| >pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302 | Back alignment and structure |
|
| >pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346 | Back alignment and structure |
|
| >pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423 | Back alignment and structure |
|
| >pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327 | Back alignment and structure |
|
| >pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334 | Back alignment and structure |
|
| >pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361 | Back alignment and structure |
|
| >pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576 | Back alignment and structure |
|
| >pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344 | Back alignment and structure |
|
| >pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576 | Back alignment and structure |
|
| >pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327 | Back alignment and structure |
|
| >pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311 | Back alignment and structure |
|
| >pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315 | Back alignment and structure |
|
| >pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371 | Back alignment and structure |
|
| >pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373 | Back alignment and structure |
|
| >pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344 | Back alignment and structure |
|
| >pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373 | Back alignment and structure |
|
| >pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327 | Back alignment and structure |
|
| >pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268 | Back alignment and structure |
|
| >pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344 | Back alignment and structure |
|
| >pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367 | Back alignment and structure |
|
| >pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270 | Back alignment and structure |
|
| >pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353 | Back alignment and structure |
|
| >pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454 | Back alignment and structure |
|
| >pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313 | Back alignment and structure |
|
| >pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290 | Back alignment and structure |
|
| >pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303 | Back alignment and structure |
|
| >pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370 | Back alignment and structure |
|
| >pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306 | Back alignment and structure |
|
| >pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | Back alignment and structure |
|
| >pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306 | Back alignment and structure |
|
| >pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334 | Back alignment and structure |
|
| >pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303 | Back alignment and structure |
|
| >pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327 | Back alignment and structure |
|
| >pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344 | Back alignment and structure |
|
| >pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317 | Back alignment and structure |
|
| >pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373 | Back alignment and structure |
|
| >pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306 | Back alignment and structure |
|
| >pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
| >pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318 | Back alignment and structure |
|
| >pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317 | Back alignment and structure |
|
| >pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271 | Back alignment and structure |
|
| >pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318 | Back alignment and structure |
|
| >pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275 | Back alignment and structure |
|
| >pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274 | Back alignment and structure |
|
| >pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446 | Back alignment and structure |
|
| >pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446 | Back alignment and structure |
|
| >pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402 | Back alignment and structure |
|
| >pdb|1A17|A Chain A, Tetratricopeptide Repeats Of Protein Phosphatase 5 Length = 166 | Back alignment and structure |
|
| >pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
| >pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321 | Back alignment and structure |
|
| >pdb|1WAO|1 Chain 1, Pp5 Structure Length = 477 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 161 bits (411), Expect = 9e-47
Identities = 58/235 (24%), Positives = 106/235 (45%), Gaps = 32/235 (13%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE-TQPMKWAMRLRVA 93
E K + + E L L+G + D+ LV +MPN +L L + T P+ W MR ++A
Sbjct: 80 EIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIA 139
Query: 94 LYLAQALEYCSSKGRALYHDLNAYR------ILFDKDGNPRLSSFGLMK-NSRDGKSY-S 145
A + + L+ + + +R IL D+ ++S FGL + + + ++ +
Sbjct: 140 QGAANGINF-------LHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMT 192
Query: 146 TNLAFTP----PEYMRTGRVTPESVVYSFGTMLLDLLSGK-----HIPPSHALD-----L 191
+ + T PE + G +TP+S +YSFG +LL++++G H P LD
Sbjct: 193 SRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIE 251
Query: 192 IRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQ 246
K +D + + + +AS+CL + +RP+ K + L +
Sbjct: 252 DEEKTIEDYIDKKMND-ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 156 bits (397), Expect = 2e-44
Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 22/221 (9%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF--HWETQPMKWAMRLRV 92
E + + L L G C ERLLV +M N ++A L P+ W R R+
Sbjct: 77 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 136
Query: 93 ALYLAQALEY--CSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY-STNLA 149
AL A+ L Y + ++ D+ A IL D++ + FGL K ++ +T +
Sbjct: 137 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR 196
Query: 150 FT----PPEYMRTGRVTPESVVYSFGTMLLDLLSGK-----HIPP--------SHALDLI 192
T PEY+ TG+ + ++ V+ +G MLL+L++G+ L+
Sbjct: 197 GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 256
Query: 193 RSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERP 233
+ K L+D L+G++ ++E +L+++A C QS ERP
Sbjct: 257 KEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERP 297
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 152 bits (387), Expect = 4e-43
Identities = 60/237 (25%), Positives = 109/237 (45%), Gaps = 23/237 (9%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF--HWETQPMKWAMRLRV 92
E + + R L +LIG C E +E +L+ ++M N L +HL+ T M W RL +
Sbjct: 85 EIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEI 144
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-NSRDGKSY-STNLAF 150
+ A+ L Y ++ D+ + IL D++ P+++ FG+ K + +++ ST +
Sbjct: 145 CIGAARGLHYL-HTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTVVKG 203
Query: 151 TP----PEYMRTGRVTPESVVYSFGTMLLDLLSGK----HIPPSH-------ALDLIRSK 195
T PEY GR+T +S VYSFG +L ++L + P A++ +
Sbjct: 204 TLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNG 263
Query: 196 NFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISL---MSLQKEA 249
++D L + + A +CL + +RP+ ++ L + LQ+
Sbjct: 264 QLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQESV 320
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 89.8 bits (223), Expect = 4e-20
Identities = 42/272 (15%), Positives = 80/272 (29%), Gaps = 44/272 (16%)
Query: 21 VLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEAD----ERLLVAEFMPNETLAKHL 76
+ D N E ++ ++ E + IG + L+ F +L+ L
Sbjct: 54 IFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFL 113
Query: 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALY--------H-DLNAYRILFDKDGNP 127
+ W +A +A+ L Y L H D+ + +L +
Sbjct: 114 KA---NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTA 170
Query: 128 RLSSFGLMKNSRDGKSYSTNLAFT------PPEYMRTGRVTPESV-----VYSFGTMLLD 176
++ FGL GKS PE + +Y+ G +L +
Sbjct: 171 CIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWE 230
Query: 177 LLSGK----------------HIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGT-ELVR 219
L S I +L+ ++ L ++ G L
Sbjct: 231 LASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCE 290
Query: 220 LASRCLQSEARERPNAKSLVISLMSLQKEAEV 251
C +A R +A + + +Q+ +
Sbjct: 291 TIEECWDHDAEARLSAGCVGERITQMQRLTNI 322
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 84.7 bits (210), Expect = 1e-18
Identities = 48/231 (20%), Positives = 92/231 (39%), Gaps = 24/231 (10%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERL-LVAEFMPNETLAKHLFHWETQPMKWAMRLR 91
E + R + +G +L +V ++ +L HL H + +
Sbjct: 68 KNEVGVLRKTRHVNILLFMGYSTA--PQLAIVTQWCEGSSLYHHL-HASETKFEMKKLID 124
Query: 92 VALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGL--MKNSRDGKSYSTNL 148
+A A+ ++Y +K + H DL + I +D ++ FGL K+ G L
Sbjct: 125 IARQTARGMDYLHAKS--IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQL 182
Query: 149 AFTP----PEYMRTGRVTPESV---VYSFGTMLLDLLSGK----HIPPSHALDLIRSKNF 197
+ + PE +R P S VY+FG +L +L++G+ +I + I
Sbjct: 183 SGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI--IEMVGR 240
Query: 198 LLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248
L + + + + RL + CL+ + ERP+ ++ + L +E
Sbjct: 241 GSLSPDLSKVRSNCPK--RMKRLMAECLKKKRDERPSFPRILAEIEELARE 289
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 83.5 bits (207), Expect = 4e-18
Identities = 47/225 (20%), Positives = 93/225 (41%), Gaps = 18/225 (8%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF-HWETQPMKWAMRLRVA 93
E + LR + +G + +V E++ +L + L + + RL +A
Sbjct: 84 EVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMA 143
Query: 94 LYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP 152
+A+ + Y ++ + H +L + +L DK ++ FGL + S + A TP
Sbjct: 144 YDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTP 203
Query: 153 ----PEYMRTGRVTPESVVYSFGTMLLDLLSGK----HIPPSHALDLIRSKNFLLLMDSA 204
PE +R +S VYSFG +L +L + + ++ P+ + + K L
Sbjct: 204 EWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRL----- 258
Query: 205 LEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEA 249
+ ++ + C +E +RP+ +++ L L K A
Sbjct: 259 ---EIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA 300
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 79.2 bits (196), Expect = 7e-17
Identities = 35/225 (15%), Positives = 79/225 (35%), Gaps = 19/225 (8%)
Query: 34 EEAKAVGNLRSERLANLIGCCYEADERLL--VAEFMPNETLAKHLFHWETQPMKWAMRLR 91
EE + + ++G C + +MP +L L + + ++
Sbjct: 56 EECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVK 115
Query: 92 VALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAF 150
AL +A+ + + + + LN+ ++ D+D R+S + K S A+
Sbjct: 116 FALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADV-KFSFQSPGRMYAPAW 174
Query: 151 TPPEYMRTGRVTPESV---VYSFGTMLLDLLSGK----HIPPSHALDLIRSKNFLLLMDS 203
PE ++ ++SF +L +L++ + + + + +
Sbjct: 175 VAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPP 234
Query: 204 ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248
+ H S L C+ + +RP +V L +Q +
Sbjct: 235 GISPHVSK--------LMKICMNEDPAKRPKFDMIVPILEKMQDK 271
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 78.5 bits (194), Expect = 2e-16
Identities = 44/227 (19%), Positives = 88/227 (38%), Gaps = 22/227 (9%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQP-MKWAMRLR 91
+ E + + + + L G C LV E+ +L L E P A +
Sbjct: 49 IVELRQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMS 106
Query: 92 VALYLAQALEYC-SSKGRALYH-DLNAYRILFDKDGN-PRLSSFGLMKNSRDGKSYSTNL 148
L +Q + Y S + +AL H DL +L G ++ FG + D +++ TN
Sbjct: 107 WCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGT---ACDIQTHMTNN 163
Query: 149 AFTP----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSA 204
+ PE + + V+S+G +L ++++ + P + + +M +
Sbjct: 164 KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRK--PFDEIGGPAFR----IMWAV 217
Query: 205 LEGH---FSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248
G + + L +RC + +RP+ + +V + L +
Sbjct: 218 HNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRY 264
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 75.5 bits (186), Expect = 2e-15
Identities = 46/237 (19%), Positives = 89/237 (37%), Gaps = 25/237 (10%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+E K + L + IG Y+ + E++ TL + W+ R+
Sbjct: 55 LKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGII-KSMDSQYPWSQRVSF 113
Query: 93 ALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGL--------------MKN 137
A +A + Y S + H DLN++ L ++ N ++ FGL
Sbjct: 114 AKDIASGMAYLHSMN--IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSL 171
Query: 138 SRDGKSYSTNLAFTP----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIR 193
+ + + P PE + + V+SFG +L +++ + P + L R
Sbjct: 172 KKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDY---LPR 228
Query: 194 SKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAE 250
+ +F L + L+ + + + RC + +RP+ L L +L+
Sbjct: 229 TMDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLA 285
|
| >1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1 Length = 118 | Back alignment and structure |
|---|
Score = 70.3 bits (173), Expect = 4e-15
Identities = 26/115 (22%), Positives = 48/115 (41%), Gaps = 12/115 (10%)
Query: 315 MQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPT---VYARRCLSYLMNDMPQE 371
M++ K+ G+ A + A+ CY++ I + P +Y+ R +Y Q+
Sbjct: 1 MEQVNELKEKGNKALSVGNIDDALQCYSEAIK----LDPHNHVLYSNRSAAYAKKGDYQK 56
Query: 372 ALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLK-----DGTNLEAKKN 421
A D + + PDW +AA L L +A+ T + + N + K+
Sbjct: 57 AYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEG 111
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 74.3 bits (183), Expect = 5e-15
Identities = 42/242 (17%), Positives = 75/242 (30%), Gaps = 35/242 (14%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVAL 94
E A R E + +G C ++ TL + + ++A
Sbjct: 79 EVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVV-RDAKIVLDVNKTRQIAQ 137
Query: 95 YLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGL--MKNSRDGKSYSTNLAFT 151
+ + + Y +KG + H DL + + +D +G ++ FGL + L
Sbjct: 138 EIVKGMGYLHAKG--ILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQ 194
Query: 152 P-------PEYMRTGRVTPESV---------VYSFGTMLLDLLSGK----HIPPSHALDL 191
PE +R E V++ GT+ +L + + P +
Sbjct: 195 NGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQ 254
Query: 192 IRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEV 251
+ + G E+ + C E ERP L+ L L K
Sbjct: 255 MG-TGMKPNLSQ-------IGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRR 306
Query: 252 PS 253
S
Sbjct: 307 LS 308
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 72.3 bits (178), Expect = 2e-14
Identities = 49/223 (21%), Positives = 87/223 (39%), Gaps = 20/223 (8%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVAL 94
E + NL + L G + +V EF+P L L + P+KW+++LR+ L
Sbjct: 73 EVFIMSNLNHPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRL-LDKAHPIKWSVKLRLML 129
Query: 95 YLAQALEYCSSKGRALYH-DLNAYRILFDKDG-----NPRLSSFGLMKNSRDGKSYSTNL 148
+A +EY ++ + H DL + I +++ FGL S+ + L
Sbjct: 130 DIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGL---SQQSVHSVSGL 186
Query: 149 AFTP----PE--YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD 202
PE T ++ YSF +L +L+G+ P + K ++ +
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEG--PFDEYSYGKIKFINMIRE 244
Query: 203 SALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 245
L D L + C + ++RP+ +V L L
Sbjct: 245 EGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
|
| >3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus} Length = 164 | Back alignment and structure |
|---|
Score = 66.7 bits (163), Expect = 2e-13
Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 7/99 (7%)
Query: 322 KKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTV---YARRCLSYLMNDMPQEALGDAMQ 378
K G+ A K++S AID YTQ + ++P + R +Y + ++A DA
Sbjct: 15 KSEGNAAMARKEYSKAIDLYTQALS----IAPANPIYLSNRAAAYSASGQHEKAAEDAEL 70
Query: 379 AQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLE 417
A VV P + A F + A+E + G E
Sbjct: 71 ATVVDPKYSKAWSRLGLARFDMADYKGAKEAYEKGIEAE 109
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 69.5 bits (170), Expect = 3e-13
Identities = 43/263 (16%), Positives = 77/263 (29%), Gaps = 55/263 (20%)
Query: 42 LRSERLANLIGCCYEAD-----ERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYL 96
+ + +A I E LLV E+ PN +L K+L W R+A +
Sbjct: 64 MEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSL---HTSDWVSSCRLAHSV 120
Query: 97 AQALEY-------CSSKGRALYH-DLNAYRILFDKDGNPRLSSFGL--------MKNSRD 140
+ L Y A+ H DLN+ +L DG +S FGL + +
Sbjct: 121 TRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGE 180
Query: 141 GKSYSTNLAFTP----PEYMR-------TGRVTPESVVYSFGTMLLDLLSGK------HI 183
+ + + T PE + + +Y+ G + ++
Sbjct: 181 EDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGES 240
Query: 184 PPSHAL---DLIRSKNFLLLMDSA---------LEGHFSNDEGT--ELVRLASRCLQSEA 229
P + + + + M + + L C +A
Sbjct: 241 VPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDA 300
Query: 230 RERPNAKSLVISLMSLQKEAEVP 252
R A+ + L E
Sbjct: 301 EARLTAQXAEERMAELMMIWERN 323
|
| >1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A Length = 166 | Back alignment and structure |
|---|
Score = 66.6 bits (163), Expect = 3e-13
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 12/108 (11%)
Query: 322 KKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPT---VYARRCLSYLMNDMPQEALGDAMQ 378
K + F+AKD+ AI Y+Q I+ ++P+ Y R L+YL + ALGDA +
Sbjct: 17 KTQANDYFKAKDYENAIKFYSQAIE----LNPSNAIYYGNRSLAYLRTECYGYALGDATR 72
Query: 379 AQVVSPDWPTALYLQAACLFSLGMENDARETLK-----DGTNLEAKKN 421
A + + Y +AA +LG A + + +AK
Sbjct: 73 AIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMK 120
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 68.1 bits (167), Expect = 4e-13
Identities = 46/232 (19%), Positives = 85/232 (36%), Gaps = 33/232 (14%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
+EAK L+ + L G C + LV EF L + L + + + +
Sbjct: 54 RQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVL---SGKRIPPDILVNW 110
Query: 93 ALYLAQALEYC-SSKGRALYH-DLNAYRILFDKDGNPRLSS--------FGLMKNSRD-G 141
A+ +A+ + Y + H DL + IL + S FGL +R+
Sbjct: 111 AVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGL---AREWH 167
Query: 142 KSYSTNLAFTP----PEYMRTGRVTPESVVYSFGTMLLDLLSGK----HIPPSHALDLIR 193
++ + A PE +R + S V+S+G +L +LL+G+ I +
Sbjct: 168 RTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVA 227
Query: 194 SKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 245
L + S +L C + RP+ +++ L ++
Sbjct: 228 MNKLALPIPSTCP--------EPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271
|
| >4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans} Length = 126 | Back alignment and structure |
|---|
Score = 64.5 bits (158), Expect = 5e-13
Identities = 23/108 (21%), Positives = 42/108 (38%), Gaps = 12/108 (11%)
Query: 322 KKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPT---VYARRCLSYLMNDMPQEALGDAMQ 378
K G+ F+ D+ TA+ Y + + P +Y+ R Q AL D
Sbjct: 17 KNKGNEYFKKGDYPTAMRHYNEAVK----RDPENAILYSNRAACLTKLMEFQRALDDCDT 72
Query: 379 AQVVSPDWPTALYLQAACLFSLGMENDARETLK-----DGTNLEAKKN 421
+ + +AACL ++ + A+ + D +N EA++
Sbjct: 73 CIRLDSKFIKGYIRKAACLVAMREWSKAQRAYEDALQVDPSNEEAREG 120
|
| >2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens} Length = 133 | Back alignment and structure |
|---|
Score = 63.4 bits (155), Expect = 2e-12
Identities = 24/108 (22%), Positives = 41/108 (37%), Gaps = 12/108 (11%)
Query: 322 KKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPT---VYARRCLSYLMNDMPQEALGDAMQ 378
K G+ F+ D+ A+ YT+ I +P +Y+ R Y Q AL D +
Sbjct: 20 KNKGNECFQKGDYPQAMKHYTEAIK----RNPKDAKLYSNRAACYTKLLEFQLALKDCEE 75
Query: 379 AQVVSPDWPTALYLQAACLFSLGMENDARETLK-----DGTNLEAKKN 421
+ P + +AA L ++ A + + D + EA
Sbjct: 76 CIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADG 123
|
| >3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B* Length = 137 | Back alignment and structure |
|---|
Score = 63.1 bits (154), Expect = 2e-12
Identities = 25/105 (23%), Positives = 43/105 (40%), Gaps = 7/105 (6%)
Query: 322 KKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTV---YARRCLSYLMNDMPQEALGDAMQ 378
K+ G+ F + + A CY + I +P V Y R L YL P++AL D +
Sbjct: 13 KEQGNRLFVGRKYPEAAACYGRAIT----RNPLVAVYYTNRALCYLKMQQPEQALADCRR 68
Query: 379 AQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKKNKN 423
A + A + C + ++A L+ +L ++ N
Sbjct: 69 ALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLN 113
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 66.2 bits (161), Expect = 5e-12
Identities = 31/213 (14%), Positives = 59/213 (27%), Gaps = 35/213 (16%)
Query: 80 ETQPMKWAMRLRVALYLAQALEYCSSKGRALYH-DL---NAYRILFDKDGNPRLSSFGLM 135
+ + RL++ L + + L G L H L + I+ D+ G L+ F +
Sbjct: 204 THKSLVHHARLQLTLQVIRLLASLHHYG--LVHTYLRPVD---IVLDQRGGVFLTGFEHL 258
Query: 136 KNSRDGKSYSTNLAFTPPEYM----------RTGRVTPESVVYSFGTMLLDLLSGKHIPP 185
F PPE +T ++ G + + P
Sbjct: 259 VRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCAD--LP 316
Query: 186 SHALDLIRSKNFLLLMDSALEGHFSNDEGT--ELVRLASRCLQSEARERPNAKSLVISLM 243
+ + E F + + + L L+ +R + +
Sbjct: 317 NTDDAALGG----------SEWIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPE 366
Query: 244 SLQKEAEVPSYV--LLGIQHETAPSTKPLSLTP 274
Q E+ + + T P S T
Sbjct: 367 YEQLRTELSAALPLYQTDGEPTREGGAPPSGTS 399
|
| >2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1 Length = 131 | Back alignment and structure |
|---|
Score = 61.8 bits (151), Expect = 6e-12
Identities = 23/108 (21%), Positives = 39/108 (36%), Gaps = 12/108 (11%)
Query: 322 KKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPT---VYARRCLSYLMNDMPQEALGDAMQ 378
K G+ + ++F A+ Y + I+ ++P + R +Y A+ D +
Sbjct: 16 KTEGNEQMKVENFEAAVHFYGKAIE----LNPANAVYFCNRAAAYSKLGNYAGAVQDCER 71
Query: 379 AQVVSPDWPTALYLQAACLFSLGMENDARETLK-----DGTNLEAKKN 421
A + P + A L SL +A K D N K N
Sbjct: 72 AICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSN 119
|
| >2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2 Length = 281 | Back alignment and structure |
|---|
Score = 64.9 bits (158), Expect = 6e-12
Identities = 25/105 (23%), Positives = 43/105 (40%), Gaps = 7/105 (6%)
Query: 322 KKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTV---YARRCLSYLMNDMPQEALGDAMQ 378
K+ G+ F + + A CY + I +P V Y R L YL P++AL D +
Sbjct: 8 KEQGNRLFVGRKYPEAAACYGRAIT----RNPLVAVYYTNRALCYLKMQQPEQALADCRR 63
Query: 379 AQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKKNKN 423
A + A + C + ++A L+ +L ++ N
Sbjct: 64 ALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLN 108
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 65.2 bits (159), Expect = 1e-11
Identities = 49/250 (19%), Positives = 99/250 (39%), Gaps = 27/250 (10%)
Query: 17 LKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76
LK +E + L+EA + ++ L L+G C ++ EFM L +L
Sbjct: 253 LKEDTMEVEEF-----LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 307
Query: 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLM 135
Q + + L +A ++ A+EY K H +L A L ++ +++ FGL
Sbjct: 308 RECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHRNLAARNCLVGENHLVKVADFGLS 365
Query: 136 KNSRDGKSYSTNLA-----FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP-----P 185
+ + A +T PE + + + +S V++FG +L ++ + P
Sbjct: 366 RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL 425
Query: 186 SHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 245
S +L+ + + E ++ L C Q +RP+ + + ++
Sbjct: 426 SQVYELLEKDYRMERPEGCPE---------KVYELMRACWQWNPSDRPSFAEIHQAFETM 476
Query: 246 QKEAEVPSYV 255
+E+ + V
Sbjct: 477 FQESSISDEV 486
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 64.2 bits (157), Expect = 2e-11
Identities = 51/228 (22%), Positives = 87/228 (38%), Gaps = 24/228 (10%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EA+ + + LIG C + +V E + L E ++ L++
Sbjct: 160 LQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL-RTEGARLRVKTLLQM 218
Query: 93 ALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAF- 150
A +EY SK H DL A L + ++S FG+ + DG ++
Sbjct: 219 VGDAAAGMEYLESKC--CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQ 276
Query: 151 -----TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP-----PSHALDLIRSKNFLLL 200
T PE + GR + ES V+SFG +L + S P + + L
Sbjct: 277 VPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPC 336
Query: 201 MDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248
+ + + RL +C E +RP+ ++ L S++K
Sbjct: 337 PELCPD---------AVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 61.6 bits (150), Expect = 7e-11
Identities = 38/213 (17%), Positives = 74/213 (34%), Gaps = 14/213 (6%)
Query: 34 EEAKAVGNLRSERLANLIGCC---YEADERL-LVAEFMPNETLAKHLFHWETQPMKWAMR 89
EEA+ + L+ + + + + LV E M + TL +L + MK +
Sbjct: 74 EEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYL--KRFKVMKIKVL 131
Query: 90 LRVALYLAQALEYCSSKGRALYH-DLNAYRILFD-KDGNPRLSSFGLMKNSRDGKSYST- 146
+ + L++ ++ + H DL I G+ ++ GL R + +
Sbjct: 132 RSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVI 191
Query: 147 -NLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSAL 205
F PE VY+FG +L++ + + P + +
Sbjct: 192 GTPEFMAPEMYEEK-YDESVDVYAFGMCMLEMATSE--YPYSECQNAAQ-IYRRVTSGVK 247
Query: 206 EGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
F E+ + C++ ER + K L
Sbjct: 248 PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDL 280
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 Length = 477 | Back alignment and structure |
|---|
Score = 62.4 bits (152), Expect = 9e-11
Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 1/99 (1%)
Query: 313 SQMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEA 372
++ K + F+AKD+ AI Y+Q I+ + Y R L+YL + A
Sbjct: 1 GALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYA 59
Query: 373 LGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLK 411
LGDA +A + + Y +AA +LG A +
Sbjct: 60 LGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYE 98
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 62.0 bits (151), Expect = 1e-10
Identities = 41/148 (27%), Positives = 66/148 (44%), Gaps = 11/148 (7%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERL-LVAEFMPNETLAKHLFHWETQPMKWAMRLR 91
L EA + LR L L+G E L +V E+M +L +L + L+
Sbjct: 234 LAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLK 293
Query: 92 VALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAF 150
+L + +A+EY H DL A +L +D ++S FGL +++ S
Sbjct: 294 FSLDVCEAMEYLEGNN--FVHRDLAARNVLVSEDNVAKVSDFGL---TKEASSTQDTGKL 348
Query: 151 ----TPPEYMRTGRVTPESVVYSFGTML 174
T PE +R + + +S V+SFG +L
Sbjct: 349 PVKWTAPEALREKKFSTKSDVWSFGILL 376
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 60.3 bits (147), Expect = 2e-10
Identities = 41/148 (27%), Positives = 66/148 (44%), Gaps = 11/148 (7%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERL-LVAEFMPNETLAKHLFHWETQPMKWAMRLR 91
L EA + LR L L+G E L +V E+M +L +L + L+
Sbjct: 62 LAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLK 121
Query: 92 VALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAF 150
+L + +A+EY H DL A +L +D ++S FGL +++ S
Sbjct: 122 FSLDVCEAMEYLEGNN--FVHRDLAARNVLVSEDNVAKVSDFGL---TKEASSTQDTGKL 176
Query: 151 ----TPPEYMRTGRVTPESVVYSFGTML 174
T PE +R + + +S V+SFG +L
Sbjct: 177 PVKWTAPEALREKKFSTKSDVWSFGILL 204
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 61.3 bits (149), Expect = 2e-10
Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EA+ + LR E+L L E + +V E+M +L L + ++ + +
Sbjct: 227 LQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM 285
Query: 93 ALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLA-- 149
A +A + Y H DL A IL ++ +++ FGL + D + + A
Sbjct: 286 AAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 343
Query: 150 ---FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
+T PE GR T +S V+SFG +L +L + +P
Sbjct: 344 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 381
|
| >2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 148 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 2e-10
Identities = 23/107 (21%), Positives = 43/107 (40%), Gaps = 7/107 (6%)
Query: 322 KKHGDTAFRAKDFSTAIDCYTQFI--DGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQA 379
+K G+ F+ D+ A+ YTQ + D ++ R +L + +A +A +A
Sbjct: 32 RKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKA 91
Query: 380 QVVSPDWPTALYLQAACLFSLGMENDARETLK-----DGTNLEAKKN 421
ALY ++ L LG + A L+ + N ++
Sbjct: 92 IEKDGGDVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEA 138
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 61.4 bits (149), Expect = 2e-10
Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EA+ + LR E+L L E + +V E+M +L L + ++ + +
Sbjct: 310 LQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM 368
Query: 93 ALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLA-- 149
A +A + Y H DL A IL ++ +++ FGL + D + + A
Sbjct: 369 AAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 426
Query: 150 ---FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
+T PE GR T +S V+SFG +L +L + +P
Sbjct: 427 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 464
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 60.9 bits (148), Expect = 3e-10
Identities = 38/174 (21%), Positives = 72/174 (41%), Gaps = 14/174 (8%)
Query: 17 LKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76
+K + L EA + L+ ++L L + + ++ EFM +L L
Sbjct: 220 MKPGSMSVEAF-----LAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFL 273
Query: 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLM 135
E + + +A+ + + + H DL A IL +++ FGL
Sbjct: 274 KSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN--YIHRDLRAANILVSASLVCKIADFGLA 331
Query: 136 KNSRDGKSYSTNLA-----FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
+ D + + A +T PE + G T +S V+SFG +L+++++ IP
Sbjct: 332 RVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP 385
|
| >3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae} Length = 126 | Back alignment and structure |
|---|
Score = 56.1 bits (136), Expect = 4e-10
Identities = 23/103 (22%), Positives = 39/103 (37%), Gaps = 7/103 (6%)
Query: 322 KKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTV---YARRCLSYLMNDMPQEALGDAMQ 378
+ G F D+ A+ YT+ I +P Y+ R + EA+ D +
Sbjct: 8 RLEGKEYFTKSDWPNAVKAYTEMIK----RAPEDARGYSNRAAALAKLMSFPEAIADCNK 63
Query: 379 AQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKKN 421
A P++ A +A ++ A ETL +A+ N
Sbjct: 64 AIEKDPNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVN 106
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 59.2 bits (144), Expect = 5e-10
Identities = 50/250 (20%), Positives = 99/250 (39%), Gaps = 27/250 (10%)
Query: 17 LKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76
LK +E + L+EA + ++ L L+G C ++ EFM L +L
Sbjct: 46 LKEDTMEVEEF-----LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 100
Query: 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLM 135
Q + + L +A ++ A+EY K H DL A L ++ +++ FGL
Sbjct: 101 RECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLS 158
Query: 136 KNSRDGKSYSTNLA-----FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP-----P 185
+ + A +T PE + + + +S V++FG +L ++ + P
Sbjct: 159 RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL 218
Query: 186 SHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 245
S +L+ + + E ++ L C Q +RP+ + + ++
Sbjct: 219 SQVYELLEKDYRMERPEGCPE---------KVYELMRACWQWNPSDRPSFAEIHQAFETM 269
Query: 246 QKEAEVPSYV 255
+E+ + V
Sbjct: 270 FQESSISDEV 279
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 59.7 bits (144), Expect = 6e-10
Identities = 24/167 (14%), Positives = 43/167 (25%), Gaps = 15/167 (8%)
Query: 83 PMKWAMRLRVALYLAQALEYCSSKGRALYH-DL---NAYRILFDKDGNPRLSSFGL-MKN 137
+ L + SKG L H N + DG L K
Sbjct: 190 DEGILALHILTAQLIRLAANLQSKG--LVHGHFTPDN---LFIMPDGRLMLGDVSALWKV 244
Query: 138 SRDGKSYSTNLAFTPPEYM--RTGRVTPESVVYSFGTMLLDLLSGK---HIPPSHALDLI 192
G + S + + P E++ T T + G + + +
Sbjct: 245 GTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSW 304
Query: 193 RSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239
+ + + +L + L R L + R R +
Sbjct: 305 KRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAM 351
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 58.5 bits (141), Expect = 1e-09
Identities = 32/223 (14%), Positives = 64/223 (28%), Gaps = 38/223 (17%)
Query: 55 YEADERLLVAEFM--PNETLAKHLFHWETQ--PMKWAMRLRVALYLAQALEYCSSKGRAL 110
R + M +T + L + + RL++ L + + L G L
Sbjct: 170 MWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG--L 227
Query: 111 YH-DL---NAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYM---------- 156
H L + I+ D+ G L+ F + S + F PPE
Sbjct: 228 VHTYLRPVD---IVLDQRGGVFLTGFEHLVRDGARVVSSVSRGFEPPELEARRATISYHR 284
Query: 157 -RTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGT 215
R +T ++ G ++ + P + ++ +
Sbjct: 285 DRRTLMTFSFDAWALGLVIYWIWCAD--LPITKDAALGGSEWIF----RSCKNIP----Q 334
Query: 216 ELVRLASRCLQSEARERPNAKSLV----ISLMSLQKEAEVPSY 254
+ L L+ +R + + + A +P Y
Sbjct: 335 PVRALLEGFLRYPKEDRLLPLQAMETPEYEQLRTELSAALPLY 377
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 57.8 bits (140), Expect = 2e-09
Identities = 47/245 (19%), Positives = 93/245 (37%), Gaps = 36/245 (14%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADER--LLVAEFMPNETLAKHLFHWETQPMKWAMRL 90
E + + +L+ + + G CY A R L+ E++P +L +L + + + L
Sbjct: 90 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLL 148
Query: 91 RVALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY---ST 146
+ + + +EY +K H DL IL + + ++ FGL K K Y
Sbjct: 149 QYTSQICKGMEYLGTKR--YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKE 206
Query: 147 NLAF----TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD 202
PE + + + S V+SFG +L +L + S F+ ++
Sbjct: 207 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS------PPAEFMRMIG 260
Query: 203 SALEGHFSNDEGTELV----RLA-------------SRCLQSEARERPNAKSLVISLMSL 245
+ +G EL+ RL + C + +RP+ + L + + +
Sbjct: 261 NDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 320
Query: 246 QKEAE 250
+ +
Sbjct: 321 RDQMA 325
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 57.9 bits (140), Expect = 2e-09
Identities = 39/270 (14%), Positives = 84/270 (31%), Gaps = 46/270 (17%)
Query: 21 VLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEAD----ERLLVAEFMPNETLAKHL 76
+ S + E LR E + I + + + LV+++ + +L +L
Sbjct: 72 IFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL 131
Query: 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYH-------DLNAYRILFDKDGNPRL 129
+ +++AL A L + + DL + IL K+G +
Sbjct: 132 ---NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCI 188
Query: 130 SSFGL----MKNSRDGKSYSTNLAFTP----PEYMRTGRVTPESV-------VYSFGTML 174
+ GL + + T PE + + + +Y+ G +
Sbjct: 189 ADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLD-DSINMKHFESFKRADIYAMGLVF 247
Query: 175 LDLLSGKHI---PPSHAL---DLIRSKNFLLLMDSAL----------EGHFSNDEGTELV 218
++ I + L DL+ S + M + S + +
Sbjct: 248 WEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMA 307
Query: 219 RLASRCLQSEARERPNAKSLVISLMSLQKE 248
++ C + R A + +L L ++
Sbjct: 308 KIMRECWYANGAARLTALRIKKTLSQLSQQ 337
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 57.4 bits (139), Expect = 2e-09
Identities = 41/274 (14%), Positives = 91/274 (33%), Gaps = 48/274 (17%)
Query: 21 VLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADER----LLVAEFMPNETLAKHL 76
V +++ E +R E + I + L+ ++ N +L +L
Sbjct: 67 VFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYL 126
Query: 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYH-------DLNAYRILFDKDGNPRL 129
++ + L++A L + ++ + DL + IL K+G +
Sbjct: 127 ---KSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCI 183
Query: 130 SSFGL----MKNSRDGKSYSTNLAFTPPEYM-------RTGRVTPESV----VYSFGTML 174
+ GL + ++ + T YM R +S +YSFG +L
Sbjct: 184 ADLGLAVKFISDTNEVDIPPNTRVGTKR-YMPPEVLDESLNRNHFQSYIMADMYSFGLIL 242
Query: 175 LDLLSGKHIPPSHALDLIRSKNFLLLMDSALE----------------GHFSNDEGT-EL 217
++ + + + L+ D + E +S+DE ++
Sbjct: 243 WEVARRC-VSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQM 301
Query: 218 VRLASRCLQSEARERPNAKSLVISLMSLQKEAEV 251
+L + C R A + +L + + ++
Sbjct: 302 GKLMTECWAHNPASRLTALRVKKTLAKMSESQDI 335
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 2e-09
Identities = 57/250 (22%), Positives = 96/250 (38%), Gaps = 41/250 (16%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADER--LLVAEFMPNETLAKHLFHWETQPMKWAMRL 90
+E + L E + GCC +A LV E++P +L +L + A L
Sbjct: 81 KQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL---PRHSIGLAQLL 137
Query: 91 RVALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY---ST 146
A + + + Y ++ H DL A +L D D ++ FGL K +G Y
Sbjct: 138 LFAQQICEGMAYLHAQH--YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRE 195
Query: 147 NLAF----TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD 202
+ PE ++ + S V+SFG L +LL +H L +
Sbjct: 196 DGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL-------THCDSSQSPPTKFLELI 248
Query: 203 SALEGHFSNDEGTELV----RLA-------------SRCLQSEARERPNAKSLVISLMSL 245
+G + TEL+ RL C ++EA RP ++L+ L ++
Sbjct: 249 GIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTV 308
Query: 246 QK--EAEVPS 253
+ + + PS
Sbjct: 309 HEKYQGQAPS 318
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 2e-09
Identities = 57/238 (23%), Positives = 88/238 (36%), Gaps = 29/238 (12%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
E A + L + L G C DE +LV EF+ +L +L + +L V
Sbjct: 60 FEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYL-KKNKNCINILWKLEV 118
Query: 93 ALYLAQALEYCSSKGRALYH-DLNAYRIL-----FDKDGNPR---LSSFGLMKNSRDGKS 143
A LA A+ + L H ++ A IL K GNP LS G+
Sbjct: 119 AKQLAAAMHFLEENT--LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDI 176
Query: 144 YSTNLAFTPPEYMRTGRV-TPESVVYSFGTMLLDLLSGKHIP-----PSHALDLIRSKNF 197
+ + PPE + + + +SFGT L ++ SG P L ++
Sbjct: 177 LQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQ 236
Query: 198 LLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEVPSYV 255
L + EL L + C+ E RP+ ++++ L SL VP
Sbjct: 237 L-----------PAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLVPRGS 283
|
| >2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae} Length = 111 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 8e-09
Identities = 15/102 (14%), Positives = 38/102 (37%), Gaps = 8/102 (7%)
Query: 315 MQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTV---YARRCLSYLMNDMPQE 371
M + K+ G++ F+ + A+ CY Q I P Y+ + ++ + +
Sbjct: 1 MSQFEKQKEQGNSLFKQGLYREAVHCYDQLIT----AQPQNPVGYSNKAMALIKLGEYTQ 56
Query: 372 ALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDG 413
A+ Q + +++ + L + A +++
Sbjct: 57 AIQMCQQGLRYTSTAEHV-AIRSKLQYRLELAQGAVGSVQIP 97
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 1e-08
Identities = 46/245 (18%), Positives = 92/245 (37%), Gaps = 36/245 (14%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADER--LLVAEFMPNETLAKHLFHWETQPMKWAMRL 90
E + + +L+ + + G CY A R L+ E++P +L +L + + + L
Sbjct: 59 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLL 117
Query: 91 RVALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY---ST 146
+ + + +EY +K H DL IL + + ++ FGL K K +
Sbjct: 118 QYTSQICKGMEYLGTKR--YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKE 175
Query: 147 NLAF----TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD 202
PE + + + S V+SFG +L +L + S F+ ++
Sbjct: 176 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS------PPAEFMRMIG 229
Query: 203 SALEGHFSNDEGTELV----RLA-------------SRCLQSEARERPNAKSLVISLMSL 245
+ +G EL+ RL + C + +RP+ + L + + +
Sbjct: 230 NDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 289
Query: 246 QKEAE 250
+
Sbjct: 290 RDNMA 294
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 54.9 bits (133), Expect = 1e-08
Identities = 41/174 (23%), Positives = 74/174 (42%), Gaps = 14/174 (8%)
Query: 17 LKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76
LK + L EA + L+ +RL L + + ++ E+M N +L L
Sbjct: 45 LKQGSMSPDAF-----LAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFL 98
Query: 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLM 135
+ L +A +A+ + + + H DL A IL + +++ FGL
Sbjct: 99 KTPSGIKLTINKLLDMAAQIAEGMAFIEERN--YIHRDLRAANILVSDTLSCKIADFGLA 156
Query: 136 KNSRDGKSYSTNLA-----FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
+ D + + A +T PE + G T +S V+SFG +L ++++ IP
Sbjct: 157 RLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 210
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 | Back alignment and structure |
|---|
Score = 55.5 bits (134), Expect = 1e-08
Identities = 17/113 (15%), Positives = 39/113 (34%), Gaps = 6/113 (5%)
Query: 314 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEAL 373
+ E + AF + D++ AI + ++ + R ++ P++A+
Sbjct: 139 KSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVCVW-DAELRELRAECFIKEGEPRKAI 197
Query: 374 GDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLK-----DGTNLEAKKN 421
D A + D A Y + + LG + ++ D + +
Sbjct: 198 SDLKAASKLKNDNTEAFYKISTLYYQLGDHELSLSEVRECLKLDQDHKRCFAH 250
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 8e-07
Identities = 20/103 (19%), Positives = 38/103 (36%), Gaps = 6/103 (5%)
Query: 325 GDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSP 384
G A + A+ + +DG + Y RR +L + AL D + +
Sbjct: 33 GKKLLAAGQLADALSQFHAAVDGDPD-NYIAYYRRATVFLAMGKSKAALPDLTKVIQLKM 91
Query: 385 DWPTALYLQAACLFSLGMENDARETLK-----DGTNLEAKKNK 422
D+ A + L G ++A + K + + E K+ +
Sbjct: 92 DFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSENEEKEAQ 134
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 2e-05
Identities = 16/101 (15%), Positives = 36/101 (35%), Gaps = 3/101 (2%)
Query: 314 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFID---GGTMVSPTVYARRCLSYLMNDMPQ 370
Q+++ + + R ++ A Y + + R C + ++ P
Sbjct: 253 QVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSIAEYTVRSKERICHCFSKDEKPV 312
Query: 371 EALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLK 411
EA+ + + PD AL +A M ++A + +
Sbjct: 313 EAIRVCSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYE 353
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268 | Back alignment and structure |
|---|
Score = 54.5 bits (132), Expect = 1e-08
Identities = 33/158 (20%), Positives = 70/158 (44%), Gaps = 9/158 (5%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
+EA+ + L +L G C + +V E++ N L +L + ++ + L +
Sbjct: 51 FQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYL-RSHGKGLEPSQLLEM 109
Query: 93 ALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLA-- 149
+ + + + S H DL A L D+D ++S FG+ + D + S+
Sbjct: 110 CYDVCEGMAFLESHQ--FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKF 167
Query: 150 ---FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
++ PE + + +S V++FG ++ ++ S +P
Sbjct: 168 PVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMP 205
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 53.7 bits (130), Expect = 2e-08
Identities = 41/174 (23%), Positives = 73/174 (41%), Gaps = 14/174 (8%)
Query: 17 LKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76
++ + D +EEA+ + L +L L G C E LV EFM + L+ +L
Sbjct: 40 IREGAMSEEDF-----IEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYL 94
Query: 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLM 135
+ L + L + + + Y + H DL A L ++ ++S FG+
Sbjct: 95 RTQRGLFAAETL-LGMCLDVCEGMAYLEEAC--VIHRDLAARNCLVGENQVIKVSDFGMT 151
Query: 136 KNSRDGKSYSTNLA-----FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
+ D + S+ + PE R + +S V+SFG ++ ++ S IP
Sbjct: 152 RFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP 205
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} Length = 359 | Back alignment and structure |
|---|
Score = 53.4 bits (129), Expect = 5e-08
Identities = 21/113 (18%), Positives = 40/113 (35%), Gaps = 6/113 (5%)
Query: 314 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEAL 373
+ E + AF D++ AI + ++ + R ++ P++A+
Sbjct: 116 KADEMQRLRSQALDAFDGADYTAAITFLDKILEVCVW-DAELRELRAECFIKEGEPRKAI 174
Query: 374 GDAMQAQVVSPDWPTALYLQAACLFSLGMENDA----RETLK-DGTNLEAKKN 421
D A + D A Y + + LG + RE LK D + +
Sbjct: 175 SDLKAASKLKSDNTEAFYKISTLYYQLGDHELSLSEVRECLKLDQDHKRCFAH 227
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} Length = 359 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 6e-06
Identities = 16/117 (13%), Positives = 41/117 (35%), Gaps = 8/117 (6%)
Query: 314 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFID---GGTMVSPTVYARRCLSYLMNDMPQ 370
Q+++ + + R ++ A Y + + R C + ++ P
Sbjct: 230 QVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSVAEYTVRSKERICHCFSKDEKPV 289
Query: 371 EALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLK-----DGTNLEAKKNK 422
EA+ + + PD AL +A M ++A + + + + + ++
Sbjct: 290 EAIRICSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYEAAQEHNENDQQIREGL 346
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} Length = 359 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 3e-05
Identities = 21/106 (19%), Positives = 38/106 (35%), Gaps = 12/106 (11%)
Query: 325 GDTAFRAKDFSTAIDCYTQFIDGGTMVSPT---VYARRCLSYLMNDMPQEALGDAMQAQV 381
G A + A+ + +DG P Y RR +L + AL D +
Sbjct: 10 GKKLLAAGQLADALSQFHAAVDG----DPDNYIAYYRRATVFLAMGKSKAALPDLTKVIA 65
Query: 382 VSPDWPTALYLQAACLFSLGMENDARETLK-----DGTNLEAKKNK 422
+ D+ A + L G ++A + K + + E K+ +
Sbjct: 66 LKMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSEQEEKEAE 111
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 6e-08
Identities = 48/241 (19%), Positives = 90/241 (37%), Gaps = 39/241 (16%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADER--LLVAEFMPNETLAKHLFHWETQPMKWAMRL 90
+E + + NL E + G C E L+ EF+P+ +L ++L + + + +L
Sbjct: 71 KKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK-INLKQQL 129
Query: 91 RVALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY---ST 146
+ A+ + + ++Y S+ H DL A +L + + ++ FGL K K Y
Sbjct: 130 KYAVQICKGMDYLGSRQ--YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKD 187
Query: 147 NLAF----TPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLM 201
+ PE + + S V+SFG L +LL+ AL L M
Sbjct: 188 DRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQM 247
Query: 202 DSALEGHFSNDEGTELV----RLAS-------------RCLQSEARERPNAKSLVISLMS 244
+ + RL +C + + R + ++L+ +
Sbjct: 248 --------TVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEA 299
Query: 245 L 245
L
Sbjct: 300 L 300
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 53.7 bits (129), Expect = 7e-08
Identities = 47/230 (20%), Positives = 82/230 (35%), Gaps = 24/230 (10%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EA + + LIG + ++ E L L + + A +
Sbjct: 439 LQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFS-LDLASLILY 496
Query: 93 ALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLA-- 149
A L+ AL Y SK H D+ A +L + +L FGL + D Y +
Sbjct: 497 AYQLSTALAYLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 554
Query: 150 ---FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP-----PSHALDLIRSKNFLLLM 201
+ PE + R T S V+ FG + ++L P + + I + L +
Sbjct: 555 PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP 614
Query: 202 DSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEV 251
+ L L ++C + RP L L ++ +E ++
Sbjct: 615 PNCPP---------TLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEKL 655
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 8e-08
Identities = 30/163 (18%), Positives = 59/163 (36%), Gaps = 26/163 (15%)
Query: 96 LAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP-- 152
+ +AL Y S+G + H DL I D+ N ++ FGL KN +
Sbjct: 125 ILEALSYIHSQG--IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 153 -----------PEYM------RTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSK 195
Y+ TG + +YS G + +++ P S ++ +
Sbjct: 183 SSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY----PFSTGMERVNIL 238
Query: 196 NFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
L + F +++ ++ + + +RP A++L
Sbjct: 239 KKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTL 281
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283 | Back alignment and structure |
|---|
Score = 52.2 bits (126), Expect = 9e-08
Identities = 42/158 (26%), Positives = 77/158 (48%), Gaps = 9/158 (5%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
+EEAK + NL E+L L G C + ++ E+M N L +L + + L +
Sbjct: 67 IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-LEM 125
Query: 93 ALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLA-- 149
+ +A+EY SK H DL A L + G ++S FGL + D + S+ +
Sbjct: 126 CKDVCEAMEYLESKQ--FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF 183
Query: 150 ---FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
++PPE + + + +S +++FG ++ ++ S +P
Sbjct: 184 PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 221
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 9e-08
Identities = 39/267 (14%), Positives = 82/267 (30%), Gaps = 46/267 (17%)
Query: 21 VLESSDLGETLNLEEAKAVGNLRSERLANLIGCC----YEADERLLVAEFMPNETLAKHL 76
+ S D E LR E + I + + + L+ + +L +L
Sbjct: 38 IFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL 97
Query: 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYH-------DLNAYRILFDKDGNPRL 129
+ + LR+ L +A L + + DL + IL K+G +
Sbjct: 98 ---QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCI 154
Query: 130 SSFGL----MKNSRDGKSYSTNLAFTP----PEYMRTGRVTPESV-------VYSFGTML 174
+ GL +++ + T PE + + + +++FG +L
Sbjct: 155 ADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLD-ETIQVDCFDSYKRVDIWAFGLVL 213
Query: 175 LDLLSGKH---IPPSHAL---DLIRSKNFLLLMDSA---------LEGHFSNDEGT-ELV 218
++ I + D++ + M + + +D L
Sbjct: 214 WEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLA 273
Query: 219 RLASRCLQSEARERPNAKSLVISLMSL 245
+L C R A + +L +
Sbjct: 274 KLMKECWYQNPSARLTALRIKKTLTKI 300
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 1e-07
Identities = 40/161 (24%), Positives = 68/161 (42%), Gaps = 13/161 (8%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L EA +G + L G ++ ++V E+M N +L L + Q + +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF-TVIQLVGM 152
Query: 93 ALYLAQALEYCSSKGRALY-H-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY---STN 147
+A ++Y S G Y H DL A IL + + ++S FGL + D +
Sbjct: 153 LRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRG 209
Query: 148 LAF----TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
T PE + + T S V+S+G +L +++S P
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325 | Back alignment and structure |
|---|
Score = 51.5 bits (124), Expect = 2e-07
Identities = 37/148 (25%), Positives = 57/148 (38%), Gaps = 13/148 (8%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L EA +G + L G ++V E+M N +L L + Q + +
Sbjct: 98 LSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQF-TIMQLVGM 156
Query: 93 ALYLAQALEYCSSKGRALY-H-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY---STN 147
+ + Y S G Y H DL A +L D + ++S FGL + D +T
Sbjct: 157 LRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTG 213
Query: 148 LAF----TPPEYMRTGRVTPESVVYSFG 171
T PE + + S V+SFG
Sbjct: 214 GKIPIRWTAPEAIAFRTFSSASDVWSFG 241
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 2e-07
Identities = 39/196 (19%), Positives = 77/196 (39%), Gaps = 23/196 (11%)
Query: 54 CYEADERL-LVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYH 112
+E + L +V ++ L K + + + L + + AL++ + + L+
Sbjct: 91 SFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR-KILHR 149
Query: 113 DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPESVVY 168
D+ + I KDG +L FG+ + + TP PE +S ++
Sbjct: 150 DIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIW 209
Query: 169 SFGTMLLDLLSGKHIPPSHALDL------IRSKNFLLLMDSALEGHFSNDEGTELVRLAS 222
+ G +L +L + K A + I S +F + H+S +L L S
Sbjct: 210 ALGCVLYELCTLK--HAFEAGSMKNLVLKIISGSF-----PPVSLHYSY----DLRSLVS 258
Query: 223 RCLQSEARERPNAKSL 238
+ + R+RP+ S+
Sbjct: 259 QLFKRNPRDRPSVNSI 274
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 2e-07
Identities = 33/166 (19%), Positives = 55/166 (33%), Gaps = 39/166 (23%)
Query: 91 RVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKN-SRDGKSYS- 145
+V YL AL + S+G ++ D+ I G +L FGL+ G
Sbjct: 158 QVWGYLRDTLLALAHLHSQG-LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQ 216
Query: 146 --TNLAFTPPEYMRTGRVTPE---------SVVYSFGTMLLDLLSGKHIPPSHALDL--I 192
P YM PE + V+S G +L++ P +
Sbjct: 217 EGD------PRYM-----APELLQGSYGTAADVFSLGLTILEVACNME-LPHGGEGWQQL 264
Query: 193 RSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
R + S+ EL + L+ + + R A++L
Sbjct: 265 RQGY----LPPEFTAGLSS----ELRSVLVMMLEPDPKLRATAEAL 302
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 3e-07
Identities = 33/147 (22%), Positives = 63/147 (42%), Gaps = 11/147 (7%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L EA +G + L G + +++ E+M N L K L + + + + +
Sbjct: 94 LGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQL-VGM 152
Query: 93 ALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGL---MKNSRDGKSYSTNL 148
+A ++Y ++ H DL A IL + + ++S FGL +++ + ++
Sbjct: 153 LRGIAAGMKYLANMN--YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGG 210
Query: 149 AF----TPPEYMRTGRVTPESVVYSFG 171
T PE + + T S V+SFG
Sbjct: 211 KIPIRWTAPEAISYRKFTSASDVWSFG 237
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 3e-07
Identities = 55/280 (19%), Positives = 93/280 (33%), Gaps = 65/280 (23%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADER--LLVAEFMPNETL------------AKHLFH 78
E + + L S+ + G Y + LV E++P+ L A L
Sbjct: 72 QREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLL 131
Query: 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKN 137
+ +Q + + +EY S+ H DL A IL + + + +++ FGL K
Sbjct: 132 YSSQ-------------ICKGMEYLGSRR--CVHRDLAARNILVESEAHVKIADFGLAKL 176
Query: 138 SRDGKSY---STNLAF----TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALD 190
K Y PE + + +S V+SFG +L +L + S + +
Sbjct: 177 LPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAE 236
Query: 191 LIRSKNFLLLMDSALEGHFSNDEGTELV----RLA-------------SRCLQSEARERP 233
+R M + EL+ RL C ++RP
Sbjct: 237 FLR-------MMGCERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRP 289
Query: 234 NAKSLVISLMSLQKEAEVPSYVLLGIQHETAPSTKPLSLT 273
+ +L L L + H P K SL+
Sbjct: 290 SFSALGPQLDMLWSGSR-GCETHAFTAH---PEGKHHSLS 325
|
| >3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695 | Back alignment and structure |
|---|
Score = 51.8 bits (124), Expect = 3e-07
Identities = 34/151 (22%), Positives = 52/151 (34%), Gaps = 37/151 (24%)
Query: 53 CCYEADERL-LVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQ---ALEYCSSKGR 108
+ ++L + + M L HL + Y A+ LE+ ++
Sbjct: 259 YAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA-----DMRFYAAEIILGLEHMHNRF- 312
Query: 109 ALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYS---TNLAFTPPEYMRTGRVTPES 165
+Y DL IL D+ G+ R+S GL + K ++ T YM PE
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGT------HGYM-----APEV 361
Query: 166 VVY-----------SFGTMLLDLLSGKHIPP 185
+ S G ML LL G P
Sbjct: 362 LQKGVAYDSSADWFSLGCMLFKLLRGH--SP 390
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 51.5 bits (123), Expect = 3e-07
Identities = 38/160 (23%), Positives = 66/160 (41%), Gaps = 12/160 (7%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
+ EA+ + L + + LIG C +A+ +LV E L K L + + + +
Sbjct: 384 MREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREE-IPVSNVAEL 441
Query: 93 ALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN---- 147
++ ++Y K H +L A +L ++S FGL K SY T
Sbjct: 442 LHQVSMGMKYLEEKN--FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG 499
Query: 148 ---LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
L + PE + + + S V+S+G + + LS P
Sbjct: 500 KWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKP 539
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543 | Back alignment and structure |
|---|
Score = 51.3 bits (123), Expect = 3e-07
Identities = 34/147 (23%), Positives = 59/147 (40%), Gaps = 24/147 (16%)
Query: 53 CCYEADERL-LVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQ---ALEYCSSKGR 108
+E L LV M + H+++ + + R Y AQ LE+ +
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEP-RAIFYTAQIVSGLEHLHQRN- 309
Query: 109 ALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYMRTGRVTPESVVY 168
+Y DL +L D DGN R+S GL + G++ + A T P +M PE ++
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGT-PGFM-----APELLLG 363
Query: 169 ----------SFGTMLLDLLSGKHIPP 185
+ G L ++++ + P
Sbjct: 364 EEYDFSVDYFALGVTLYEMIAAR--GP 388
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 50.3 bits (121), Expect = 4e-07
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 13/147 (8%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L EA + L + + +IG C EA+ +LV E L K+L + + +K + +
Sbjct: 66 LAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQ--QNRHVKDKNIIEL 122
Query: 93 ALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY---STNL 148
++ ++Y H DL A +L ++S FGL K R ++Y T+
Sbjct: 123 VHQVSMGMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 180
Query: 149 AF----TPPEYMRTGRVTPESVVYSFG 171
+ PE + + + +S V+SFG
Sbjct: 181 KWPVKWYAPECINYYKFSSKSDVWSFG 207
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327 | Back alignment and structure |
|---|
Score = 50.7 bits (122), Expect = 4e-07
Identities = 29/146 (19%), Positives = 57/146 (39%), Gaps = 11/146 (7%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EA + ++ + + L+G C L+ + MP L ++ + L
Sbjct: 65 LDEAYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYV-REHKDNIGSQYLLNW 122
Query: 93 ALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY--STNLA 149
+ +A+ + Y + L H DL A +L + +++ FGL K + +
Sbjct: 123 CVQIAKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 150 F----TPPEYMRTGRVTPESVVYSFG 171
E + T +S V+S+G
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYG 206
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336 | Back alignment and structure |
|---|
Score = 50.5 bits (121), Expect = 4e-07
Identities = 45/231 (19%), Positives = 77/231 (33%), Gaps = 38/231 (16%)
Query: 29 ETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW----ETQPM 84
E +EE A L S R+ L G E + E + +L + + E +
Sbjct: 94 EVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDR-- 151
Query: 85 KWAMRLRVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNP-RLSSFGLMKNSRD 140
YL Q LEY ++ L+ D+ A +L DG+ L FG +
Sbjct: 152 -------ALYYLGQALEGLEYLHTRR-ILHGDVKADNVLLSSDGSRAALCDFGHALCLQP 203
Query: 141 GKSYSTNLAF-----TP----PEYMRTGRVTPESVVYSFGTMLLDLLSGKH----IPPSH 187
+ L T PE + + ++S M+L +L+G H
Sbjct: 204 DGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP 263
Query: 188 ALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
I S+ + + + + ++ L+ E R +A L
Sbjct: 264 LCLKIASEPPPIR---EIPPSCA-PLTAQAIQ---EGLRKEPVHRASAMEL 307
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576 | Back alignment and structure |
|---|
Score = 50.9 bits (122), Expect = 4e-07
Identities = 37/149 (24%), Positives = 56/149 (37%), Gaps = 31/149 (20%)
Query: 53 CCYEADERL-LVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQ---ALEYCSSKGR 108
YE + L LV M L H++H A R Y A+ LE +
Sbjct: 251 YAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEA---RAVFYAAEICCGLEDLHRER- 306
Query: 109 ALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAF--TPPEYMRTGRVTPESV 166
+Y DL IL D G+ R+S GL + +G++ T YM PE V
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKG---RVGT-VGYM-----APEVV 357
Query: 167 VY----------SFGTMLLDLLSGKHIPP 185
+ G +L ++++G+ P
Sbjct: 358 KNERYTFSPDWWALGCLLYEMIAGQ--SP 384
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 5e-07
Identities = 36/182 (19%), Positives = 69/182 (37%), Gaps = 18/182 (9%)
Query: 62 LVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYH-DLNAYRIL 120
+ EF TL + + + + + L + + + ++Y SK L + DL I
Sbjct: 97 IQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK--LINRDLKPSNIF 154
Query: 121 FDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPESVVYSFGTMLLD 176
++ FGL+ + ++ + + T PE + + E +Y+ G +L +
Sbjct: 155 LVDTKQVKIGDFGLVTSLKNDGKRTRSKG-TLRYMSPEQISSQDYGKEVDLYALGLILAE 213
Query: 177 LLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAK 236
LL A + SK F L D + F + L + L + +RPN
Sbjct: 214 LLH----VCDTAFE--TSKFFTDLRDGIISDIFDK----KEKTLLQKLLSKKPEDRPNTS 263
Query: 237 SL 238
+
Sbjct: 264 EI 265
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 5e-07
Identities = 51/240 (21%), Positives = 94/240 (39%), Gaps = 27/240 (11%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLL-VAEFMPNETLAKHLFHWETQPMKWAMRLR 91
L E + L + LIG + + +M + L + + + P + +
Sbjct: 70 LREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDL-IS 128
Query: 92 VALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAF 150
L +A+ +EY + + H DL A + D+ +++ FGL ++ D + YS
Sbjct: 129 FGLQVARGMEYLAEQK--FVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHR 186
Query: 151 --------TPPEYMRTGRVTPESVVYSFGTMLLDLLS-GK----HIPPSHALDLIRSKNF 197
T E ++T R T +S V+SFG +L +LL+ G HI P +
Sbjct: 187 HARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRR 246
Query: 198 LLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEVPSYVLL 257
L + + L ++ +C +++ RP + LV + + YV L
Sbjct: 247 LPQPEYCPD---------SLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGDHYVQL 297
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 49.5 bits (119), Expect = 6e-07
Identities = 37/158 (23%), Positives = 60/158 (37%), Gaps = 10/158 (6%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EA + + LIG E + ++ E L L + ++ +
Sbjct: 64 LQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASL-ILY 121
Query: 93 ALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLA-- 149
A L+ AL Y SK H D+ A +L + +L FGL + D Y +
Sbjct: 122 AYQLSTALAYLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 179
Query: 150 ---FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
+ PE + R T S V+ FG + ++L P
Sbjct: 180 PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 217
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 50.0 bits (119), Expect = 7e-07
Identities = 28/248 (11%), Positives = 62/248 (25%), Gaps = 40/248 (16%)
Query: 21 VLESSDLGETLNLEEAKAVGNLRSERLANLIGCCY---EADERLLVAEFMPNETLAKHLF 77
V + ++ E + L+ + + +LV E TL +
Sbjct: 102 VQKPANPWEFYIGTQLMER--LKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAIN 159
Query: 78 HWETQPMKWAMRLRVALYLAQ---ALEYCSSKGRA----------LYHDLNAYRILFDKD 124
++ P K + V + + +E L + D
Sbjct: 160 LYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLS 219
Query: 125 GNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEY----MRTGRVTPESV-VYSFGTMLL 175
L G S D K + FT + M + + + + +
Sbjct: 220 AGLALIDLGQ---SIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVY 276
Query: 176 DLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNA 235
+L G ++ ++++ + D E L +
Sbjct: 277 CMLFGTYMK-------VKNEGGECKPEGLFRRLPHLDMWNEFFH---VMLNIPDCHHLPS 326
Query: 236 KSLVISLM 243
L+ +
Sbjct: 327 LDLLRQKL 334
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 7e-07
Identities = 28/146 (19%), Positives = 58/146 (39%), Gaps = 11/146 (7%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
+ A+G+L + L+G C LV +++P +L H+ + + L
Sbjct: 63 TDHMLAIGSLDHAHIVRLLGLCPG-SSLQLVTQYLPLGSLLDHV-RQHRGALGPQLLLNW 120
Query: 93 ALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN---- 147
+ +A+ + Y G + H +L A +L +++ FG+
Sbjct: 121 GVQIAKGMYYLEEHG--MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAK 178
Query: 148 --LAFTPPEYMRTGRVTPESVVYSFG 171
+ + E + G+ T +S V+S+G
Sbjct: 179 TPIKWMALESIHFGKYTHQSDVWSYG 204
|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} Length = 514 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 7e-07
Identities = 19/89 (21%), Positives = 35/89 (39%), Gaps = 6/89 (6%)
Query: 325 GDTAFRAKDFSTAIDCYTQFIDGGTMVSP--TVYARRCLSYLMNDMPQEALGDAMQAQVV 382
G+ FR K + AI Y ++ + Y+ Y+ ++ + + +A +
Sbjct: 13 GNQFFRNKKYDDAIKYYNWALE----LKEDPVFYSNLSACYVSVGDLKKVVEMSTKALEL 68
Query: 383 SPDWPTALYLQAACLFSLGMENDARETLK 411
PD+ L +A+ LG DA L
Sbjct: 69 KPDYSKVLLRRASANEGLGKFADAMFDLS 97
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 9e-07
Identities = 48/262 (18%), Positives = 94/262 (35%), Gaps = 45/262 (17%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADER------LLVAEFMPN----ETLAKHLFHWETQ 82
L EA + +A L+G + + +++ FM + L
Sbjct: 73 LREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPF 132
Query: 83 PMKWAMRLRVALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRD- 140
+ +R + +A +EY SS+ H DL A + +D ++ FGL SR
Sbjct: 133 NLPLQTLVRFMVDIACGMEYLSSRN--FIHRDLAARNCMLAEDMTVCVADFGL---SRKI 187
Query: 141 -GKSY---STNLAF----TPPEYMRTGRVTPESVVYSFGTMLLDLLS-GK----HIPPSH 187
Y E + T S V++FG + ++++ G+ I +
Sbjct: 188 YSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE 247
Query: 188 ALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISL----- 242
+ + N L +E E+ L +C ++ ++RP+ L + L
Sbjct: 248 IYNYLIGGNRLKQPPECME---------EVYDLMYQCWSADPKQRPSFTCLRMELENILG 298
Query: 243 -MSLQKEAEVPSYVLLGIQHET 263
+S+ ++ P Y+ + H
Sbjct: 299 HLSVLSTSQDPLYINIERAHHH 320
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 1e-06
Identities = 29/146 (19%), Positives = 58/146 (39%), Gaps = 11/146 (7%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EA + ++ + + L+G C L+ + MP L ++ + L
Sbjct: 65 LDEAYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYV-REHKDNIGSQYLLNW 122
Query: 93 ALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN---- 147
+ +A+ + Y + L H DL A +L + +++ FGL K +
Sbjct: 123 CVQIAKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 148 --LAFTPPEYMRTGRVTPESVVYSFG 171
+ + E + T +S V+S+G
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYG 206
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 1e-06
Identities = 52/259 (20%), Positives = 90/259 (34%), Gaps = 40/259 (15%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL---FHWETQPMKWAMR 89
L EA + + + IG ++ R ++ E M L L +QP AM
Sbjct: 122 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 181
Query: 90 --LRVALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRL---SSFGLMKNSRD--G 141
L VA +A +Y H D+ A L G R+ FG+ +RD
Sbjct: 182 DLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGM---ARDIYR 236
Query: 142 KSY---STNLAF----TPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKH----IPPSHAL 189
Y PPE G T ++ +SFG +L ++ S G L
Sbjct: 237 AGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 296
Query: 190 DLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEA 249
+ + S + + + R+ ++C Q + +RPN ++ ++
Sbjct: 297 EFVTSGGRMDPPKNCPG---------PVYRIMTQCWQHQPEDRPNFAIIL---ERIEYCT 344
Query: 250 EVPSYVLLGIQHETAPSTK 268
+ P + + E P +
Sbjct: 345 QDPDVINTALPIEYGPLVE 363
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 1e-06
Identities = 42/230 (18%), Positives = 83/230 (36%), Gaps = 31/230 (13%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL--------FHWETQPM 84
L EA + + L+G + L++ E M L +L + P
Sbjct: 76 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPP 135
Query: 85 KWAMRLRVALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKS 143
+ +++A +A + Y ++ H DL A + +D ++ FG+ ++ +
Sbjct: 136 SLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 193
Query: 144 Y--STNLAF----TPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKH----IPPSHALDLI 192
Y PE ++ G T S V+SFG +L ++ + + + L +
Sbjct: 194 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 253
Query: 193 RSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISL 242
L D+ + L L C Q + RP+ ++ S+
Sbjct: 254 MEGGLLDKPDNCPD---------MLFELMRMCWQYNPKMRPSFLEIISSI 294
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 48.4 bits (116), Expect = 2e-06
Identities = 42/181 (23%), Positives = 72/181 (39%), Gaps = 27/181 (14%)
Query: 62 LVAEFMPNETLAKHLFHWETQPMKWAMRL---RVALYLAQ---ALEYCSSKGRALYH-DL 114
L+ E+ P T+ + L + + R A Y+ + AL YC SK + H D+
Sbjct: 86 LILEYAPLGTVYREL--------QKLSKFDEQRTATYITELANALSYCHSKR--VIHRDI 135
Query: 115 NAYRILFDKDGNPRLSSFGLMKNSRDGKSYST--NLAFTPPEYMRTGRVTPESV-VYSFG 171
+L G +++ FG ++ + L + PPE M GR+ E V ++S G
Sbjct: 136 KPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPE-MIEGRMHDEKVDLWSLG 194
Query: 172 TMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARE 231
+ + L GK PP A + + ++ + L SR L+ +
Sbjct: 195 VLCYEFLVGK--PPFEANTYQETYKRISRVEFTFPDFVTEG----ARDLISRLLKHNPSQ 248
Query: 232 R 232
R
Sbjct: 249 R 249
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 2e-06
Identities = 33/145 (22%), Positives = 55/145 (37%), Gaps = 10/145 (6%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
+ EA + NL + LIG E + ++ E P L +L + + +
Sbjct: 61 MSEAVIMKNLDHPHIVKLIGII-EEEPTWIIMELYPYGELGHYLERNKNSLKVLTL-VLY 118
Query: 93 ALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLA-- 149
+L + +A+ Y S H D+ IL +L FGL + D Y ++
Sbjct: 119 SLQICKAMAYLESIN--CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL 176
Query: 150 ---FTPPEYMRTGRVTPESVVYSFG 171
+ PE + R T S V+ F
Sbjct: 177 PIKWMSPESINFRRFTTASDVWMFA 201
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 48.3 bits (115), Expect = 2e-06
Identities = 38/197 (19%), Positives = 66/197 (33%), Gaps = 37/197 (18%)
Query: 65 EFMPNETLAKHLFHWETQPMKWAMRLRVALY----LAQALEYCSSKGRALYHDL---NAY 117
+ E L + + V L+ +A+A+E+ SKG ++ DL N
Sbjct: 141 QLCRKENLKDWM---NRRCSLEDREHGVCLHIFIQIAEAVEFLHSKG-LMHRDLKPSN-- 194
Query: 118 RILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYMRTGRV-TP------------- 163
I F D ++ FGL+ + T L P TG+V T
Sbjct: 195 -IFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNY 253
Query: 164 --ESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLA 221
+ ++S G +L +LL I + + + F+ + + +
Sbjct: 254 SHKVDIFSLGLILFELLYSF--STQMERVRIITD----VRNLKFPLLFT-QKYPQEHMMV 306
Query: 222 SRCLQSEARERPNAKSL 238
L ERP A +
Sbjct: 307 QDMLSPSPTERPEATDI 323
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 2e-06
Identities = 46/256 (17%), Positives = 87/256 (33%), Gaps = 34/256 (13%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL-----FHWETQPMKWA 87
L EA + + + IG ++ R ++ E M L L + +
Sbjct: 81 LMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAML 140
Query: 88 MRLRVALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRL---SSFGLMKNSRDGKS 143
L VA +A +Y H D+ A L G R+ FG+ ++
Sbjct: 141 DLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 198
Query: 144 YSTNLA------FTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKH----IPPSHALDLI 192
Y + PPE G T ++ +SFG +L ++ S G L+ +
Sbjct: 199 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 258
Query: 193 RSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEVP 252
S + + + R+ ++C Q + +RPN ++ ++ + P
Sbjct: 259 TSGGRMDPPKNCPG---------PVYRIMTQCWQHQPEDRPNFAIIL---ERIEYCTQDP 306
Query: 253 SYVLLGIQHETAPSTK 268
+ + E P +
Sbjct: 307 DVINTALPIEYGPLVE 322
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 47.6 bits (114), Expect = 3e-06
Identities = 34/147 (23%), Positives = 60/147 (40%), Gaps = 12/147 (8%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
+ EA+ + L + + LIG C +A+ +LV E L K L + + + +
Sbjct: 58 MREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREE-IPVSNVAEL 115
Query: 93 ALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY---STNL 148
++ ++Y K H DL A +L ++S FGL K SY +
Sbjct: 116 LHQVSMGMKYLEEKN--FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG 173
Query: 149 AF----TPPEYMRTGRVTPESVVYSFG 171
+ PE + + + S V+S+G
Sbjct: 174 KWPLKWYAPECINFRKFSSRSDVWSYG 200
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373 | Back alignment and structure |
|---|
Score = 47.4 bits (113), Expect = 4e-06
Identities = 47/243 (19%), Positives = 96/243 (39%), Gaps = 33/243 (13%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADE-RLLVAEFMPNETLAKHLFHWETQPMKWAMRLR 91
L E + + + +L+G C ++ L+V +M + L + + P + +
Sbjct: 138 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IG 196
Query: 92 VALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRD------GKSY 144
L +A+ +++ +SK H DL A + D+ +++ FGL +RD +
Sbjct: 197 FGLQVAKGMKFLASKK--FVHRDLAARNCMLDEKFTVKVADFGL---ARDMYDKEFDSVH 251
Query: 145 STNLAF-----TPPEYMRTGRVTPESVVYSFGTMLLDLLS-GK----HIPPSHALDLIRS 194
+ A E ++T + T +S V+SFG +L +L++ G + +
Sbjct: 252 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 311
Query: 195 KNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEVPSY 254
LL + + L + +C +A RP+ LV + ++ Y
Sbjct: 312 GRRLLQPEYCPD---------PLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHY 362
Query: 255 VLL 257
V +
Sbjct: 363 VHV 365
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 4e-06
Identities = 40/198 (20%), Positives = 65/198 (32%), Gaps = 39/198 (19%)
Query: 65 EFMPNETLAKHLFHWETQPMKWAMRLRVALY----LAQALEYCSSKGRALYH-DLNAYRI 119
+ E L + + V L+ +A+A+E+ SKG L H DL I
Sbjct: 95 QLCRKENLKDWM---NGRCTIEERERSVCLHIFLQIAEAVEFLHSKG--LMHRDLKPSNI 149
Query: 120 LFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYMRTGRV-TP--------------- 163
F D ++ FGL+ + T L P TG+V T
Sbjct: 150 FFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSH 209
Query: 164 ESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGT---ELVRL 220
+ ++S G +L +LL P S ++ + + F +
Sbjct: 210 KVDIFSLGLILFELL----YPFSTQMERV------RTLTDVRNLKFPPLFTQKYPCEYVM 259
Query: 221 ASRCLQSEARERPNAKSL 238
L ERP A ++
Sbjct: 260 VQDMLSPSPMERPEAINI 277
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294 | Back alignment and structure |
|---|
Score = 46.8 bits (112), Expect = 5e-06
Identities = 32/157 (20%), Positives = 62/157 (39%), Gaps = 12/157 (7%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVAL 94
E L + + ++I E D LV E++ TL++++ P+ +
Sbjct: 61 EVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIE--SHGPLSVDTAINFTN 118
Query: 95 YLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAF-TP 152
+ +++ + H D+ IL D + ++ FG+ K + TN T
Sbjct: 119 QILDGIKHAHDMR--IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTV 176
Query: 153 ----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPP 185
PE + + +YS G +L ++L G+ PP
Sbjct: 177 QYFSPEQAKGEATDECTDIYSIGIVLYEMLVGE--PP 211
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 7e-06
Identities = 35/154 (22%), Positives = 57/154 (37%), Gaps = 19/154 (12%)
Query: 96 LAQALEYCSSKGRALYH----DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFT 151
L AL+ C + + DL + D N +L FGL + S++ T
Sbjct: 120 LTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGT 179
Query: 152 P----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEG 207
P PE M +S ++S G +L +L + PP + + L EG
Sbjct: 180 PYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALM--PP------FTAFSQKELAGKIREG 231
Query: 208 HF---SNDEGTELVRLASRCLQSEARERPNAKSL 238
F EL + +R L + RP+ + +
Sbjct: 232 KFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEI 265
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 7e-06
Identities = 47/237 (19%), Positives = 95/237 (40%), Gaps = 27/237 (11%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADE-RLLVAEFMPNETLAKHLFHWETQPMKWAMRLR 91
L E + + + +L+G C ++ L+V +M + L + + P + +
Sbjct: 74 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IG 132
Query: 92 VALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAF 150
L +A+ ++Y +SK H DL A + D+ +++ FGL ++ D + YS +
Sbjct: 133 FGLQVAKGMKYLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT 190
Query: 151 --------TPPEYMRTGRVTPESVVYSFGTMLLDLLS-GK----HIPPSHALDLIRSKNF 197
E ++T + T +S V+SFG +L +L++ G + +
Sbjct: 191 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR 250
Query: 198 LLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEVPSY 254
LL + + L + +C +A RP+ LV + ++ Y
Sbjct: 251 LLQPEYCPD---------PLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHY 298
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 9e-06
Identities = 47/250 (18%), Positives = 95/250 (38%), Gaps = 38/250 (15%)
Query: 33 LEEAKAVGNLRS-ERLANLIGCCYEADERLLVAEFMPNETLAKHL--------------F 77
+ E + + + + + NL+G C + ++ E+ L ++L
Sbjct: 88 VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIN 147
Query: 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMK 136
+ M + + LA+ +EY +S+ H DL A +L ++ +++ FGL +
Sbjct: 148 RVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGLAR 205
Query: 137 NSRDGKSY--STNLAF----TPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKH----IPP 185
+ + Y +TN PE + T +S V+SFG ++ ++ + G IP
Sbjct: 206 DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 265
Query: 186 SHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 245
L++ + + + EL + C + +RP K LV L +
Sbjct: 266 EELFKLLKEGHRMDKPANCTN---------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
Query: 246 QKEAEVPSYV 255
Y+
Sbjct: 317 LTLTTNEEYL 326
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 9e-06
Identities = 43/237 (18%), Positives = 82/237 (34%), Gaps = 38/237 (16%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEAD-----ERLLVAEFMPN----ETLAKHLFHWETQP 83
L EA + + + L+G C E + +++ FM L +
Sbjct: 84 LSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKH 143
Query: 84 MKWAMRLRVALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRD-- 140
+ L+ + +A +EY S++ H DL A + D ++ FGL S+
Sbjct: 144 IPLQTLLKFMVDIALGMEYLSNRN--FLHRDLAARNCMLRDDMTVCVADFGL---SKKIY 198
Query: 141 GKSY---STNLAF----TPPEYMRTGRVTPESVVYSFGTMLLDLLS-GK----HIPPSHA 188
Y E + T +S V++FG + ++ + G +
Sbjct: 199 SGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEM 258
Query: 189 LDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 245
D + + L + L+ EL + C +++ +RP L + L L
Sbjct: 259 YDYLLHGHRLKQPEDCLD---------ELYEIMYSCWRTDPLDRPTFSVLRLQLEKL 306
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286 | Back alignment and structure |
|---|
Score = 45.9 bits (109), Expect = 1e-05
Identities = 32/215 (14%), Positives = 62/215 (28%), Gaps = 55/215 (25%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L + + +A ++ + L+VAE++ +L + +T P +R
Sbjct: 79 LSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAEWIRGGSLQEVA---DTSPSPVGA-IRA 134
Query: 93 ALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFT 151
LA A + G + + R+ DG+ L+ M
Sbjct: 135 MQSLAAAADAAHRAG--VALSIDHPSRVRVSIDGDVVLAYPATM---------------- 176
Query: 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSN 211
P+ + G L LL + P + S L +
Sbjct: 177 -------PDANPQDDIRGIGASLYALLVNR--WPLPEAGV----------RSGLAPAERD 217
Query: 212 DEGT-------------ELVRLASRCLQSEARERP 233
G ++ +A+R +Q + R
Sbjct: 218 TAGQPIEPADIDRDIPFQISAVAARSVQGDGGIRS 252
|
| >1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A Length = 131 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 1e-05
Identities = 20/117 (17%), Positives = 33/117 (28%), Gaps = 19/117 (16%)
Query: 322 KKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTV---YARRCLSYLMNDMPQEALGDAMQ 378
K+ G+ A++ KDF TA+ Y + + + PT + Y + +
Sbjct: 8 KELGNDAYKKKDFDTALKHYDKAKE----LDPTNMTYITNQAAVYFEKGDYNKCRELCEK 63
Query: 379 A-------QVVSPDWPTALYLQAACLFSLGMENDARETLK-----DGTNLEAKKNKN 423
A + A F DA T KK +
Sbjct: 64 AIEVGRENREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHRTPDVLKKCQQ 120
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 1e-05
Identities = 32/159 (20%), Positives = 62/159 (38%), Gaps = 20/159 (12%)
Query: 92 VALYLAQ---ALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN 147
V Y Q ALE+ S+ + H D+ + G +L GL + + + +
Sbjct: 138 VWKYFVQLCSALEHMHSRR--VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS 195
Query: 148 LAFTP----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 203
L TP PE + +S ++S G +L ++ + + P + N L
Sbjct: 196 LVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQ--SPFYG----DKMNLYSLCKK 249
Query: 204 ALEGHF----SNDEGTELVRLASRCLQSEARERPNAKSL 238
+ + S+ EL +L + C+ + +RP+ +
Sbjct: 250 IEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYV 288
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 2e-05
Identities = 27/139 (19%), Positives = 55/139 (39%), Gaps = 22/139 (15%)
Query: 62 LVAEFMPNETLAKHLFHWETQPMKWAMRL---RVALYLAQ---ALEYCSSKGRALYH-DL 114
++ E+M N+++ K ++ + + + + + Y ++ + + H D+
Sbjct: 120 IIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNE-KNICHRDV 178
Query: 115 ---NAYRILFDKDGNPRLSSFGLMKNSRDGKSYST--NLAFTPPEYMRTGRVT---PESV 166
N IL DK+G +LS FG + D K + F PPE + + +
Sbjct: 179 KPSN---ILMDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPE-FFSNESSYNGAKVD 234
Query: 167 VYSFGTMLLDLLSGKHIPP 185
++S G L + P
Sbjct: 235 IWSLGICLYVMFYNV--VP 251
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 3e-05
Identities = 36/160 (22%), Positives = 59/160 (36%), Gaps = 12/160 (7%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
+ E A+ +L L L G +V E P +L L R
Sbjct: 69 IREVNAMHSLDHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRL-RKHQGHFLLGTLSRY 126
Query: 93 ALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKN-SRDGKSYSTN--- 147
A+ +A+ + Y SK H DL A +L ++ FGLM+ ++ Y
Sbjct: 127 AVQVAEGMGYLESKR--FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHR 184
Query: 148 ---LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
A+ PE ++T + S + FG L ++ + P
Sbjct: 185 KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 3e-05
Identities = 36/162 (22%), Positives = 59/162 (36%), Gaps = 22/162 (13%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL-------------FHW 79
EA+ + L+ + + G C E L+V E+M + L + L
Sbjct: 91 QREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDV 150
Query: 80 ETQPMKWAMRLRVALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNS 138
P+ L VA +A + Y + H DL L + ++ FG+ ++
Sbjct: 151 APGPLGLGQLLAVASQVAAGMVYLAGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDI 208
Query: 139 RDGKSY--STNLAF----TPPEYMRTGRVTPESVVYSFGTML 174
Y PPE + + T ES V+SFG +L
Sbjct: 209 YSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVL 250
|
| >3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297 | Back alignment and structure |
|---|
Score = 44.5 bits (106), Expect = 3e-05
Identities = 35/163 (21%), Positives = 62/163 (38%), Gaps = 23/163 (14%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPN--------------ETLAKHLFH 78
EA+ + NL+ E + G C + D ++V E+M + L
Sbjct: 65 QREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPR 124
Query: 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKN 137
+ + L +A +A + Y +S+ H DL L + ++ FG+ ++
Sbjct: 125 QAKGELGLSQMLHIASQIASGMVYLASQH--FVHRDLATRNCLVGANLLVKIGDFGMSRD 182
Query: 138 SRDGKSYS--TNLAF----TPPEYMRTGRVTPESVVYSFGTML 174
Y + PPE + + T ES V+SFG +L
Sbjct: 183 VYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVIL 225
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 4e-05
Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 39/153 (25%)
Query: 53 CCYEADERL-LVAEFMPNETLAKHLFHWE---TQPMKWAMRLRVALYLAQ---ALEYCSS 105
++ +RL V E+ L HL E ++ R Y A+ AL+Y S
Sbjct: 215 YSFQTHDRLCFVMEYANGGELFFHL-SRERVFSED-------RARFYGAEIVSALDYLHS 266
Query: 106 KGRALYHDLNAYRILFDKDGNPRLSSFGLMK-NSRDGKSYSTNLAF--TPPEYMRTGRVT 162
+ +Y DL ++ DKDG+ +++ FGL K +DG + T F T PEY+
Sbjct: 267 EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT---FCGT-PEYL-----A 317
Query: 163 PESVVY----------SFGTMLLDLLSGKHIPP 185
PE + G ++ +++ G+ P
Sbjct: 318 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LP 348
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 44.4 bits (105), Expect = 4e-05
Identities = 30/183 (16%), Positives = 54/183 (29%), Gaps = 28/183 (15%)
Query: 90 LRVALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNL 148
L++ +A+++ + + H DL +L G +L FG YS +
Sbjct: 139 LKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSA 198
Query: 149 A-----------FTPPEYM--------RTGRVTPESVVYSFGTMLLDLLSGKHIPPSHAL 189
T P Y + + +++ G +L L +H A
Sbjct: 199 QRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAK 258
Query: 190 DLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEA 249
I + + + T L LQ ER + +V L +
Sbjct: 259 LRIVNGKYSIPPHD----TQY----TVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAAR 310
Query: 250 EVP 252
V
Sbjct: 311 NVN 313
|
| >4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans} Length = 127 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 4e-05
Identities = 20/117 (17%), Positives = 34/117 (29%), Gaps = 19/117 (16%)
Query: 322 KKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTV---YARRCLSYLMNDMPQEALGDAMQ 378
K G+ A++ KDF A Y + I+ + P+ Y + Y E + +
Sbjct: 12 KDLGNAAYKQKDFEKAHVHYDKAIE----LDPSNITFYNNKAAVYFEEKKFAECVQFCEK 67
Query: 379 AQVVSPDWPT-------ALYLQAACLFSLGMENDARETLK-----DGTNLEAKKNKN 423
A V + A+ + A + KK K
Sbjct: 68 AVEVGRETRADYKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSEFRDPELVKKVKE 124
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 4e-05
Identities = 33/134 (24%), Positives = 55/134 (41%), Gaps = 23/134 (17%)
Query: 62 LVAEFMPNETLAKHLFHWETQPMKWAMRL---RVALYLAQ---ALEYCSSKGRALYH-DL 114
L+ EF P L K L + R R A ++ + AL YC + + H D+
Sbjct: 91 LMLEFAPRGELYKEL--------QKHGRFDEQRSATFMEELADALHYCHERK--VIHRDI 140
Query: 115 NAYRILFDKDGNPRLSSFGLMKNSRDGKSYST--NLAFTPPEYMRTGRVTPESV-VYSFG 171
+L G +++ FG ++ + + L + PPE M G+ E V ++ G
Sbjct: 141 KPENLLMGYKGELKIADFGWSVHAPSLRRRTMCGTLDYLPPE-MIEGKTHDEKVDLWCAG 199
Query: 172 TMLLDLLSGKHIPP 185
+ + L G PP
Sbjct: 200 VLCYEFLVGM--PP 211
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 5e-05
Identities = 38/216 (17%), Positives = 68/216 (31%), Gaps = 34/216 (15%)
Query: 58 DERLLVAEFMPNETLAKHLFHWETQPMKWAMR--LRVALYLAQALEYCSSKGRALYH-DL 114
E L+ F TL + + + L + L + + LE +KG H DL
Sbjct: 103 HEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG--YAHRDL 160
Query: 115 NAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYMRTG--------------- 159
IL +G P L G M + S +
Sbjct: 161 KPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSH 220
Query: 160 -RVTPESVVYSFGTMLLDLLSGKH-----IPPSHALDLIRSKNFLLLMDSALEGHFSNDE 213
+ + V+S G +L ++ G+ ++ L + S+
Sbjct: 221 CVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSP----RHSSA- 275
Query: 214 GTELVRLASRCLQSEARERPNAKSLVISLMSLQKEA 249
L +L + + + +RP+ L+ L +LQ A
Sbjct: 276 ---LWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPA 308
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 6e-05
Identities = 30/137 (21%), Positives = 49/137 (35%), Gaps = 13/137 (9%)
Query: 56 EADERL-LVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYH-D 113
E D +L + + LA L P+ + + + AL+ + G H D
Sbjct: 104 EIDGQLYVDMRLINGVDLAAMLR--RQGPLAPPRAVAIVRQIGSALDAAHAAG--ATHRD 159
Query: 114 LNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN-----LAFTPPEYMRTGRVTPESVVY 168
+ IL D L FG+ + D K L + PE T + +Y
Sbjct: 160 VKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIY 219
Query: 169 SFGTMLLDLLSGKHIPP 185
+ +L + L+G PP
Sbjct: 220 ALTCVLYECLTGS--PP 234
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 44.0 bits (104), Expect = 6e-05
Identities = 35/157 (22%), Positives = 57/157 (36%), Gaps = 20/157 (12%)
Query: 96 LAQALEYCSSKGRALYH-DLNAYRILF---DKDGNPR--LSSFGLMKNSRDGKSYSTNLA 149
L + S + H DL + IL + G + +S FGL K G+ + +
Sbjct: 127 TTSGLAHLHSLN--IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRS 184
Query: 150 F---TP----PEYMR---TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLL 199
T PE + T ++S G + ++S P +L R N LL
Sbjct: 185 GVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQ--RQANILL 242
Query: 200 LMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAK 236
S H E L + + + ++RP+AK
Sbjct: 243 GACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAK 279
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 7e-05
Identities = 31/150 (20%), Positives = 58/150 (38%), Gaps = 25/150 (16%)
Query: 53 CCYEADERL-LVAEFMPNETLAKHLFHWETQ-PMKWAMRLRVALYLAQ---ALEYCSSKG 107
++ + L LV E+ L L + + P + A YLA+ A++ G
Sbjct: 128 FAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMA-----RFYLAEIVMAIDSVHRLG 182
Query: 108 RALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYM-----RTGRVT 162
++ D+ IL D+ G+ RL+ FG R + + +A P+Y+ +
Sbjct: 183 -YVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGG 241
Query: 163 PESVVY-------SFGTMLLDLLSGKHIPP 185
P + Y + G ++ G+ P
Sbjct: 242 PGTGSYGPECDWWALGVFAYEMFYGQ--TP 269
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 7e-05
Identities = 37/163 (22%), Positives = 60/163 (36%), Gaps = 18/163 (11%)
Query: 35 EAKAVGNLRSERLANL--IGCCYEADERL--LVAEFMPNETLAKHLFHWETQPMKWAMRL 90
EA+ L + + G L +V E++ TL + PM +
Sbjct: 62 EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH--TEGPMTPKRAI 119
Query: 91 RVALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN-- 147
V QAL + G + H D+ I+ ++ FG+ + D + T
Sbjct: 120 EVIADACQALNFSHQNG--IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA 177
Query: 148 -----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPP 185
+ PE R V S VYS G +L ++L+G+ PP
Sbjct: 178 AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE--PP 218
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 7e-05
Identities = 54/270 (20%), Positives = 103/270 (38%), Gaps = 41/270 (15%)
Query: 33 LEEAKAVGNLRS-ERLANLIGCCYEADERLLVAEFMPNETLAKHL--------------F 77
+ E + + + + + NL+G C + ++ E+ L ++L
Sbjct: 122 ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPS 181
Query: 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMK 136
H + + + A +A+ +EY +SK H DL A +L +D +++ FGL +
Sbjct: 182 HNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDNVMKIADFGLAR 239
Query: 137 NSRDGKSY--STNLAF----TPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKH----IPP 185
+ Y +TN PE + T +S V+SFG +L ++ + G +P
Sbjct: 240 DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 299
Query: 186 SHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISL--- 242
L++ + + + EL + C + +RP K LV L
Sbjct: 300 EELFKLLKEGHRMDKPSNCTN---------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 350
Query: 243 MSLQKEAEVPSYVLLGIQHETAPSTKPLSL 272
++L E+ Y P+T+ L
Sbjct: 351 VALTSNQEMGYYHHHHHHDYDIPTTENLYF 380
|
| >3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A Length = 537 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 8e-05
Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 7/90 (7%)
Query: 325 GDTAFRAKDFSTAIDCYTQFIDGGTMVSP---TVYARRCLSYLMNDMPQEALGDAMQAQV 381
G+ F AK+F+ AI Y I+ + P Y+ Y+ ++ + +A
Sbjct: 32 GNHFFTAKNFNEAIKYYQYAIE----LDPNEPVFYSNISACYISTGDLEKVIEFTTKALE 87
Query: 382 VSPDWPTALYLQAACLFSLGMENDARETLK 411
+ PD AL +A+ SLG DA L
Sbjct: 88 IKPDHSKALLRRASANESLGNFTDAMFDLS 117
|
| >2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A Length = 142 | Back alignment and structure |
|---|
Score = 41.7 bits (98), Expect = 8e-05
Identities = 11/87 (12%), Positives = 24/87 (27%), Gaps = 1/87 (1%)
Query: 325 GDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSP 384
G ++A + A + + + ++AL ++
Sbjct: 25 GFNQYQAGKWDDAQKIFQALCMLDHY-DARYFLGLGACRQSLGLYEQALQSYSYGALMDI 83
Query: 385 DWPTALYLQAACLFSLGMENDARETLK 411
+ P + A C LG + A
Sbjct: 84 NEPRFPFHAAECHLQLGDLDGAESGFY 110
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 8e-05
Identities = 46/214 (21%), Positives = 75/214 (35%), Gaps = 40/214 (18%)
Query: 96 LAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYST---NLAFT 151
+ A++YC K + H DL A +L D D N +++ FG G +
Sbjct: 123 IVSAVQYCHQKR--IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYA 180
Query: 152 PPEYMRTGR--VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHF 209
PE + G+ PE V+S G +L L+SG +P +N L + L G +
Sbjct: 181 APE-LFQGKKYDGPEVDVWSLGVILYTLVSG-SLP-------FDGQNLKELRERVLRGKY 231
Query: 210 SNDEG--TELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEVPSYVLLGIQHE-TAPS 266
T+ L R L +R + + ++
Sbjct: 232 RIPFYMSTDCENLLKRFLVLNPIKRGTLEQI--------------------MKDRWINAG 271
Query: 267 TKPLSLTPLGEACSRLDLTAIHEILEGMGYKDDE 300
+ L P E + +I+ GMGY +E
Sbjct: 272 HEEDELKPFVEPELDISDQKRIDIMVGMGYSQEE 305
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 8e-05
Identities = 34/144 (23%), Positives = 52/144 (36%), Gaps = 26/144 (18%)
Query: 49 NLIGCCYEADERLLVAEFMPNETLAKHL--------------FHWETQPMKWAMRLRVAL 94
NL+G C L E+ P+ L L + + L A
Sbjct: 90 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 149
Query: 95 YLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY--STNLAF- 150
+A+ ++Y S K H DL A IL ++ +++ FGL SR + Y T
Sbjct: 150 DVARGMDYLSQKQ--FIHRDLAARNILVGENYVAKIADFGL---SRGQEVYVKKTMGRLP 204
Query: 151 ---TPPEYMRTGRVTPESVVYSFG 171
E + T S V+S+G
Sbjct: 205 VRWMAIESLNYSVYTTNSDVWSYG 228
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 1e-04
Identities = 39/155 (25%), Positives = 62/155 (40%), Gaps = 15/155 (9%)
Query: 98 QALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL---MKNSRDGKSYSTNLAF--TP 152
+ LEY G+ ++ D+ A IL +DG+ +++ FG+ + D F TP
Sbjct: 132 EGLEYLHKNGQ-IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTP 190
Query: 153 ----PEYMRTGRVTPESV-VYSFGTMLLDLLSGK----HIPPSHALDLIRSKNFLLLMDS 203
PE M R ++SFG ++L +G PP L L + L
Sbjct: 191 CWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETG 250
Query: 204 ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
+ G ++ S CLQ + +RP A L
Sbjct: 251 VQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAEL 285
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 1e-04
Identities = 31/160 (19%), Positives = 60/160 (37%), Gaps = 31/160 (19%)
Query: 91 RVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN 147
V L++ + AL+Y ++ ++ D+ IL D+ G+ ++ F + +T
Sbjct: 116 TVKLFICELVMALDYLQNQR-IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITT- 173
Query: 148 LAFTPPEYMRTGRVTPESVV-------------YSFGTMLLDLLSGKHIPPSHALDLIRS 194
+A T YM PE +S G +LL G+ P H S
Sbjct: 174 MAGT-KPYM-----APEMFSSRKGAGYSFAVDWWSLGVTAYELLRGR--RPYHIRS---S 222
Query: 195 KNFLLLMDSALEG--HFSNDEGTELVRLASRCLQSEARER 232
+ ++ + + + E+V L + L+ +R
Sbjct: 223 TSSKEIVHTFETTVVTYPSAWSQEMVSLLKKLLEPNPDQR 262
|
| >2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1 Length = 198 | Back alignment and structure |
|---|
Score = 41.7 bits (98), Expect = 1e-04
Identities = 19/111 (17%), Positives = 34/111 (30%), Gaps = 15/111 (13%)
Query: 322 KKHGDTAFRAKDFSTAIDCYTQ---FIDGGTMVSP------------TVYARRCLSYLMN 366
K+ G+ F+ + + AI Y + F + Y N
Sbjct: 42 KEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKN 101
Query: 367 DMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLE 417
+A+ A + + + ALY G +A+E L +L
Sbjct: 102 KDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLN 152
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 1e-04
Identities = 37/149 (24%), Positives = 60/149 (40%), Gaps = 16/149 (10%)
Query: 98 QALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----P 153
QAL Y ++G ++ D+ + IL DG +LS FG +L TP P
Sbjct: 152 QALAYLHAQGV-IHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAP 210
Query: 154 EYMRTGRVTPESVVYSFGTMLLDLLSGK----HIPPSHALDLIRSKNFLLLMDSALEGHF 209
E + E ++S G M+++++ G+ P A+ +R L +S
Sbjct: 211 EVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNS---HKV 267
Query: 210 SNDEGTELVRLASRCLQSEARERPNAKSL 238
S L R L + +ER A+ L
Sbjct: 268 SP----VLRDFLERMLVRDPQERATAQEL 292
|
| >3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans} Length = 162 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 1e-04
Identities = 22/122 (18%), Positives = 36/122 (29%), Gaps = 22/122 (18%)
Query: 322 KKHGDTAFRAKDFSTAIDCYTQ---FIDGGTMVSP--------------TVYARRCLSYL 364
++ G+ F KD+ AID Y +D + +YA YL
Sbjct: 15 RQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYL 74
Query: 365 MNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLK-----DGTNLEAK 419
EA + + AL+ +A + ++A E LK
Sbjct: 75 NIGDLHEAEETSSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVV 134
Query: 420 KN 421
Sbjct: 135 AR 136
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 2e-04
Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 18/149 (12%)
Query: 98 QALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----P 153
+ L+Y S+ + ++ D+ A +L + G +L+ FG+ D + TP P
Sbjct: 130 KGLDYLHSEKK-IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAP 188
Query: 154 EYMRTGRVTPESVVYSFGTMLLDLLSGK----HIPPSHALDLIRSKNFLLLMDSALEGHF 209
E ++ ++ ++S G ++L G+ + P L LI KN LEG++
Sbjct: 189 EVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLI-PKN----NPPTLEGNY 243
Query: 210 SNDEGTELVRLASRCLQSEARERPNAKSL 238
S L CL E RP AK L
Sbjct: 244 SK----PLKEFVEACLNKEPSFRPTAKEL 268
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 2e-04
Identities = 39/191 (20%), Positives = 66/191 (34%), Gaps = 41/191 (21%)
Query: 62 LVAEFMPNETLAKHLFHWETQPMKWAMRL---RVALYLAQ---ALEYCSSKGRALYH-DL 114
+V E +L + K L YL Q +Y + H DL
Sbjct: 118 VVLELCRRRSLLELH--------KRRKALTEPEARYYLRQIVLGCQYLHRNR--VIHRDL 167
Query: 115 NAYRILFDKDGNPRLSSFGL-MKNSRDGKSYST---NLAFTPPEYMRTGRV-TPESVVYS 169
+ ++D ++ FGL K DG+ + PE + + + + E V+S
Sbjct: 168 KLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPE-VLSKKGHSFEVDVWS 226
Query: 170 FGTMLLDLLSGKHIPPSHALDL------IRSKNFLLLMDSALEGHFSNDEGTELVRLASR 223
G ++ LL GK PP L I+ + ++ H + L +
Sbjct: 227 IGCIMYTLLVGK--PPFETSCLKETYLRIKKNEY------SIPKHIN----PVAASLIQK 274
Query: 224 CLQSEARERPN 234
LQ++ RP
Sbjct: 275 MLQTDPTARPT 285
|
| >1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A Length = 336 | Back alignment and structure |
|---|
Score = 42.2 bits (99), Expect = 2e-04
Identities = 13/118 (11%), Positives = 38/118 (32%), Gaps = 14/118 (11%)
Query: 314 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQ---FIDGGTMVSP-----------TVYARR 359
+++++ K+ G F+ + A+ Y + +++ + S +
Sbjct: 143 KLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNL 202
Query: 360 CLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLE 417
+ +L A+ +A + + L + ++ AR + L
Sbjct: 203 AMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLY 260
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 3e-04
Identities = 39/191 (20%), Positives = 66/191 (34%), Gaps = 41/191 (21%)
Query: 62 LVAEFMPNETLAKHLFHWETQPMKWAMRL---RVALYLAQ---ALEYCSSKGRALYH-DL 114
+V E +L + K L YL Q +Y + H DL
Sbjct: 92 VVLELCRRRSLLELH--------KRRKALTEPEARYYLRQIVLGCQYLHRNR--VIHRDL 141
Query: 115 NAYRILFDKDGNPRLSSFGL-MKNSRDGKSYSTN---LAFTPPEYMRTGRV-TPESVVYS 169
+ ++D ++ FGL K DG+ + PE + + + + E V+S
Sbjct: 142 KLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPE-VLSKKGHSFEVDVWS 200
Query: 170 FGTMLLDLLSGKHIPPSHALDL------IRSKNFLLLMDSALEGHFSNDEGTELVRLASR 223
G ++ LL GK PP L I+ + ++ H + L +
Sbjct: 201 IGCIMYTLLVGK--PPFETSCLKETYLRIKKNEY------SIPKHIN----PVAASLIQK 248
Query: 224 CLQSEARERPN 234
LQ++ RP
Sbjct: 249 MLQTDPTARPT 259
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 3e-04
Identities = 38/150 (25%), Positives = 62/150 (41%), Gaps = 34/150 (22%)
Query: 53 CCYEADERL-LVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQ---ALEYCSSKGR 108
++ +RL V E+ L HL + R Y A+ ALEY S+
Sbjct: 72 YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE-----RARFYGAEIVSALEYLHSRD- 125
Query: 109 ALYHDLNAYRILFDKDGNPRLSSFGLMK-NSRDGKSYSTNLAF--TPPEYMRTGRVTPES 165
+Y D+ ++ DKDG+ +++ FGL K DG + T F T PEY+ PE
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT---FCGT-PEYL-----APEV 176
Query: 166 VVY----------SFGTMLLDLLSGKHIPP 185
+ G ++ +++ G+ P
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGR--LP 204
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 3e-04
Identities = 46/240 (19%), Positives = 93/240 (38%), Gaps = 38/240 (15%)
Query: 33 LEEAKAVGNLRS-ERLANLIGCCYEADERLLVAEFMPNETLAKHL--------------F 77
+ E + + + + + NL+G C + ++ E+ L ++L
Sbjct: 134 VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIN 193
Query: 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMK 136
+ M + + LA+ +EY +S+ H DL A +L ++ +++ FGL +
Sbjct: 194 RVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGLAR 251
Query: 137 NSRDGKSY--STNLAF----TPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKH----IPP 185
+ + Y +TN PE + T +S V+SFG ++ ++ + G IP
Sbjct: 252 DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 311
Query: 186 SHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 245
L++ + + + EL + C + +RP K LV L +
Sbjct: 312 EELFKLLKEGHRMDKPANCTN---------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 362
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 4e-04
Identities = 37/149 (24%), Positives = 65/149 (43%), Gaps = 16/149 (10%)
Query: 98 QALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----P 153
QALE+ S ++ D+ + IL DG+ +L+ FG +S + + TP P
Sbjct: 127 QALEFLHSNQV-IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAP 185
Query: 154 EYMRTGRVTPESVVYSFGTMLLDLLSGK----HIPPSHALDLIRSKNFLLLMDSALEGHF 209
E + P+ ++S G M ++++ G+ + P AL LI + L +
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP---EKL 242
Query: 210 SNDEGTELVRLASRCLQSEARERPNAKSL 238
S +RCL+ + +R +AK L
Sbjct: 243 SA----IFRDFLNRCLEMDVEKRGSAKEL 267
|
| >3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
Score = 41.0 bits (97), Expect = 4e-04
Identities = 30/163 (18%), Positives = 56/163 (34%), Gaps = 23/163 (14%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPN----ETLAKHLFHWETQPMKWAM 88
EA L+ + L+G + ++ + + E L H +
Sbjct: 60 RHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDR 119
Query: 89 RLRVALYLAQAL----------EYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKN 137
++ AL + EY SS + H DL +L N ++S GL +
Sbjct: 120 TVKSALEPPDFVHLVAQIAAGMEYLSSHH--VVHKDLATRNVLVYDKLNVKISDLGLFRE 177
Query: 138 SRDGKSYSTNLA------FTPPEYMRTGRVTPESVVYSFGTML 174
Y + PE + G+ + +S ++S+G +L
Sbjct: 178 VYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVL 220
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355 | Back alignment and structure |
|---|
Score = 40.7 bits (96), Expect = 6e-04
Identities = 36/164 (21%), Positives = 60/164 (36%), Gaps = 37/164 (22%)
Query: 91 RVALYLAQ---ALEYCSSKGRALYHDL---NAYRILFDKDGNPRLSSFGLMKNSRDGKSY 144
V +Y+ + ALE+ G +Y D+ N IL D +G+ L+ FGL K ++
Sbjct: 160 EVQIYVGEIVLALEHLHKLG-IIYRDIKLEN---ILLDSNGHVVLTDFGLSKEFVADETE 215
Query: 145 STNLAF--TPPEYMRTGRVTPESVVY------------SFGTMLLDLLSGKHIPPSHALD 190
F T EYM P+ V S G ++ +LL+G P
Sbjct: 216 RAY-DFCGT-IEYM-----APDIVRGGDSGHDKAVDWWSLGVLMYELLTGA--SPFTVDG 266
Query: 191 LIRSKNFLLLMDSALEG--HFSNDEGTELVRLASRCLQSEARER 232
+ + L+ + + L R L + ++R
Sbjct: 267 --EKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKR 308
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437 | Back alignment and structure |
|---|
Score = 40.5 bits (95), Expect = 7e-04
Identities = 25/109 (22%), Positives = 48/109 (44%), Gaps = 11/109 (10%)
Query: 53 CCYEADERL-LVAEFMPNETLAKHLFHWETQ-PMKWAMRLRVALYLAQ---ALEYCSSKG 107
++ D L LV ++ L L +E + P + A YLA+ A++
Sbjct: 141 YAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMA-----RFYLAEMVIAIDSVHQLH 195
Query: 108 RALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYM 156
++ D+ IL D +G+ RL+ FG + + +++A P+Y+
Sbjct: 196 -YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYI 243
|
| >3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325 | Back alignment and structure |
|---|
Score = 40.2 bits (95), Expect = 8e-04
Identities = 36/114 (31%), Positives = 52/114 (45%), Gaps = 34/114 (29%)
Query: 91 RVALYLAQ---ALEYCSSKGRALYHDL---NAYRILFDKDGNPRLSSFGLMK-NSRDGKS 143
V YLA+ AL++ S G +Y DL N IL D++G+ +L+ FGL K + K
Sbjct: 127 DVKFYLAELALALDHLHSLG-IIYRDLKPEN---ILLDEEGHIKLTDFGLSKESIDHEKK 182
Query: 144 YSTNLAF--TPPEYMRTGRVTPESVVY----------SFGTMLLDLLSGKHIPP 185
+ F T EYM PE V SFG ++ ++L+G P
Sbjct: 183 AYS---FCGT-VEYM-----APEVVNRRGHTQSADWWSFGVLMFEMLTGT--LP 225
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345 | Back alignment and structure |
|---|
Score = 40.3 bits (95), Expect = 8e-04
Identities = 36/150 (24%), Positives = 64/150 (42%), Gaps = 34/150 (22%)
Query: 53 CCYEADERL-LVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQ---ALEYCSSKGR 108
C++ + RL V E++ L H+ Q + Y A+ AL Y +G
Sbjct: 77 SCFQTESRLFFVIEYVNGGDLMFHM-----QRQRKLPEEHARFYSAEISLALNYLHERG- 130
Query: 109 ALYHDLNAYRILFDKDGNPRLSSFGLMK-NSRDGKSYSTNLAF--TPPEYMRTGRVTPES 165
+Y DL +L D +G+ +L+ +G+ K R G + ST F T P Y+ PE
Sbjct: 131 IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTST---FCGT-PNYI-----APEI 181
Query: 166 VVY----------SFGTMLLDLLSGKHIPP 185
+ + G ++ ++++G+ P
Sbjct: 182 LRGEDYGFSVDWWALGVLMFEMMAGR--SP 209
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290 | Back alignment and structure |
|---|
Score = 39.9 bits (94), Expect = 9e-04
Identities = 34/160 (21%), Positives = 66/160 (41%), Gaps = 20/160 (12%)
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAF 150
++A+ + +ALE+ SK ++ D+ +L + G ++ FG+ D + + A
Sbjct: 113 KIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDID-AG 171
Query: 151 TPPEYMRTGRVTPESV---------VYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLM 201
P YM R+ PE ++S G +++L + P + + ++
Sbjct: 172 CKP-YMAPERINPELNQKGYSVKSDIWSLGITMIELAILR--FPYDSWGTPFQQLKQVVE 228
Query: 202 D---SALEGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
+ FS E V S+CL+ ++ERP L
Sbjct: 229 EPSPQLPADKFSA----EFVDFTSQCLKKNSKERPTYPEL 264
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 423 | |||
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 100.0 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 100.0 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 100.0 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 100.0 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 100.0 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 100.0 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 100.0 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 100.0 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 100.0 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 100.0 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 100.0 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 100.0 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 100.0 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 100.0 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 100.0 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 100.0 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 100.0 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 100.0 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 100.0 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 100.0 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 100.0 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 100.0 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 100.0 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 100.0 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 100.0 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 100.0 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 100.0 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 100.0 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 100.0 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 100.0 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 100.0 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 100.0 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 100.0 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 100.0 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 100.0 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 100.0 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 100.0 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 100.0 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 100.0 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 100.0 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 100.0 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 100.0 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 100.0 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 100.0 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 100.0 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 100.0 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 100.0 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 100.0 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 100.0 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 100.0 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 100.0 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 100.0 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 100.0 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 100.0 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 100.0 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 100.0 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 100.0 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 100.0 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 100.0 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 100.0 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 100.0 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 100.0 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 100.0 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 100.0 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 100.0 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 100.0 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 100.0 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 100.0 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 100.0 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 100.0 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 100.0 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 100.0 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 100.0 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 100.0 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 100.0 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 100.0 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 100.0 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 100.0 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 100.0 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 100.0 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 100.0 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 100.0 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 100.0 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 100.0 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 100.0 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 100.0 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 100.0 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 100.0 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 100.0 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 100.0 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 100.0 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 100.0 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 100.0 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 100.0 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 100.0 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 100.0 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 100.0 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 100.0 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 100.0 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 100.0 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 100.0 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 100.0 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 100.0 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 100.0 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 100.0 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 100.0 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 100.0 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 100.0 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 100.0 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 100.0 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 100.0 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 100.0 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 100.0 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 100.0 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 100.0 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 100.0 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 100.0 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 100.0 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 100.0 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 100.0 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 100.0 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 100.0 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 100.0 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 100.0 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 100.0 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 100.0 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 100.0 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 100.0 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 100.0 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 100.0 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 100.0 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 100.0 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 100.0 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 100.0 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 100.0 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 100.0 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 100.0 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 100.0 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 100.0 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 100.0 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 100.0 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 100.0 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 100.0 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 100.0 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 100.0 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 100.0 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 100.0 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 100.0 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 100.0 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 100.0 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 100.0 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 100.0 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 100.0 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 100.0 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 100.0 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 100.0 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 100.0 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 100.0 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 100.0 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 100.0 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 100.0 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 100.0 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 100.0 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 100.0 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 100.0 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 100.0 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 100.0 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 100.0 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 100.0 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 100.0 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 100.0 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 100.0 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 100.0 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 100.0 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 100.0 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 100.0 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 100.0 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 100.0 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 100.0 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 100.0 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 100.0 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 100.0 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 100.0 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 100.0 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 100.0 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 100.0 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 100.0 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 100.0 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 100.0 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 100.0 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 100.0 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 100.0 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 100.0 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 100.0 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 100.0 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 100.0 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 100.0 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 100.0 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 100.0 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 100.0 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 100.0 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 100.0 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 100.0 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 100.0 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 100.0 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 100.0 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 100.0 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 100.0 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 100.0 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 100.0 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 100.0 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 100.0 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 100.0 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 100.0 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 100.0 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.98 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.93 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.85 | |
| 4gco_A | 126 | Protein STI-1; structural genomics, PSI-biology, m | 99.84 | |
| 2hr2_A | 159 | Hypothetical protein; alpha-alpha superhelix fold, | 99.83 | |
| 4gcn_A | 127 | Protein STI-1; structural genomics, PSI-biology, m | 99.77 | |
| 3gyz_A | 151 | Chaperone protein IPGC; asymmetric homodimer, tetr | 99.76 | |
| 3rkv_A | 162 | Putative peptidylprolyl isomerase; structural geno | 99.74 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.74 | |
| 3upv_A | 126 | Heat shock protein STI1; TPR-fold, adaptor protein | 99.74 | |
| 3sz7_A | 164 | HSC70 cochaperone (SGT); TPR domain, GET4, GET5, G | 99.69 | |
| 2vgx_A | 148 | Chaperone SYCD; alternative dimer assembly, tetrat | 99.69 | |
| 4ga2_A | 150 | E3 SUMO-protein ligase ranbp2; TPR motif, nuclear | 99.68 | |
| 1hxi_A | 121 | PEX5, peroxisome targeting signal 1 receptor PEX5; | 99.68 | |
| 2xcb_A | 142 | PCRH, regulatory protein PCRH; protein transport, | 99.68 | |
| 3q49_B | 137 | STIP1 homology and U box-containing protein 1; E3 | 99.63 | |
| 3urz_A | 208 | Uncharacterized protein; tetratricopeptide repeats | 99.61 | |
| 1zu2_A | 158 | Mitochondrial import receptor subunit TOM20-3; TPR | 99.6 | |
| 1elw_A | 118 | TPR1-domain of HOP; HOP, TPR-domain, peptide-compl | 99.59 | |
| 2fbn_A | 198 | 70 kDa peptidylprolyl isomerase, putative; sulfur | 99.59 | |
| 1kt0_A | 457 | FKBP51, 51 kDa FK506-binding protein; FKBP-like pp | 99.58 | |
| 1p5q_A | 336 | FKBP52, FK506-binding protein 4; isomerase; 2.80A | 99.58 | |
| 2lni_A | 133 | Stress-induced-phosphoprotein 1; structural genomi | 99.58 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 99.57 | |
| 4ga2_A | 150 | E3 SUMO-protein ligase ranbp2; TPR motif, nuclear | 99.57 | |
| 2c2l_A | 281 | CHIP, carboxy terminus of HSP70-interacting protei | 99.57 | |
| 2h6f_A | 382 | Protein farnesyltransferase/geranylgeranyltransfer | 99.56 | |
| 3vtx_A | 184 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.55 | |
| 2dba_A | 148 | Smooth muscle cell associated protein-1, isoform 2 | 99.55 | |
| 1ihg_A | 370 | Cyclophilin 40; ppiase immunophilin tetratricopept | 99.55 | |
| 1a17_A | 166 | Serine/threonine protein phosphatase 5; hydrolase, | 99.55 | |
| 2xev_A | 129 | YBGF; tetratricopeptide, alpha-helical, metal bind | 99.55 | |
| 2if4_A | 338 | ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, | 99.54 | |
| 2kck_A | 112 | TPR repeat; tetratricopeptide repeat, structural g | 99.54 | |
| 2pl2_A | 217 | Hypothetical conserved protein TTC0263; TPR, prote | 99.54 | |
| 3k9i_A | 117 | BH0479 protein; putative protein binding protein, | 99.53 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 99.53 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 99.53 | |
| 4i17_A | 228 | Hypothetical protein; TPR repeats protein, structu | 99.53 | |
| 2vyi_A | 131 | SGTA protein; chaperone, TPR repeat, phosphoprotei | 99.52 | |
| 3urz_A | 208 | Uncharacterized protein; tetratricopeptide repeats | 99.52 | |
| 2h6f_A | 382 | Protein farnesyltransferase/geranylgeranyltransfer | 99.52 | |
| 1elr_A | 131 | TPR2A-domain of HOP; HOP, TPR-domain, peptide-comp | 99.5 | |
| 2pl2_A | 217 | Hypothetical conserved protein TTC0263; TPR, prote | 99.49 | |
| 2l6j_A | 111 | TPR repeat-containing protein associated with HSP; | 99.47 | |
| 3vtx_A | 184 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.46 | |
| 4i17_A | 228 | Hypothetical protein; TPR repeats protein, structu | 99.46 | |
| 1hh8_A | 213 | P67PHOX, NCF-2, neutrophil cytosol factor 2; cell | 99.46 | |
| 1na0_A | 125 | Designed protein CTPR3; de novo protein; HET: IPT; | 99.45 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 99.44 | |
| 2e2e_A | 177 | Formate-dependent nitrite reductase complex NRFG; | 99.44 | |
| 2kat_A | 115 | Uncharacterized protein; NESG, structure, structur | 99.42 | |
| 3gyz_A | 151 | Chaperone protein IPGC; asymmetric homodimer, tetr | 99.42 | |
| 1hh8_A | 213 | P67PHOX, NCF-2, neutrophil cytosol factor 2; cell | 99.41 | |
| 1xnf_A | 275 | Lipoprotein NLPI; TPR, tetratricopeptide, structur | 99.39 | |
| 3qky_A | 261 | Outer membrane assembly lipoprotein YFIO; membrane | 99.36 | |
| 4gco_A | 126 | Protein STI-1; structural genomics, PSI-biology, m | 99.36 | |
| 3uq3_A | 258 | Heat shock protein STI1; HSP90, peptide binding, c | 99.36 | |
| 2kc7_A | 99 | BFR218_protein; tetratricopeptide repeat, all-alph | 99.34 | |
| 4eqf_A | 365 | PEX5-related protein; accessory protein, tetratric | 99.33 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 99.33 | |
| 2fo7_A | 136 | Synthetic consensus TPR protein; tetratricopeptide | 99.33 | |
| 3ma5_A | 100 | Tetratricopeptide repeat domain protein; NESG, str | 99.32 | |
| 2fo7_A | 136 | Synthetic consensus TPR protein; tetratricopeptide | 99.32 | |
| 2yhc_A | 225 | BAMD, UPF0169 lipoprotein YFIO; essential BAM comp | 99.32 | |
| 2vgx_A | 148 | Chaperone SYCD; alternative dimer assembly, tetrat | 99.31 | |
| 4eqf_A | 365 | PEX5-related protein; accessory protein, tetratric | 99.31 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.31 | |
| 3ieg_A | 359 | DNAJ homolog subfamily C member 3; TPR motif, chap | 99.31 | |
| 2r5s_A | 176 | Uncharacterized protein VP0806; APC090868.1, vibri | 99.31 | |
| 3as5_A | 186 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.3 | |
| 3qou_A | 287 | Protein YBBN; thioredoxin-like fold, tetratricopep | 99.29 | |
| 2y4t_A | 450 | DNAJ homolog subfamily C member 3; chaperone, endo | 99.29 | |
| 2q7f_A | 243 | YRRB protein; TPR, protein binding; 2.49A {Bacillu | 99.28 | |
| 2gw1_A | 514 | Mitochondrial precursor proteins import receptor; | 99.28 | |
| 3as5_A | 186 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.28 | |
| 1na3_A | 91 | Designed protein CTPR2; de novo protein; HET: IPT; | 99.28 | |
| 1fch_A | 368 | Peroxisomal targeting signal 1 receptor; protein-p | 99.28 | |
| 4abn_A | 474 | Tetratricopeptide repeat protein 5; P53 cofactor, | 99.27 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.27 | |
| 2e2e_A | 177 | Formate-dependent nitrite reductase complex NRFG; | 99.27 | |
| 3uq3_A | 258 | Heat shock protein STI1; HSP90, peptide binding, c | 99.27 | |
| 4abn_A | 474 | Tetratricopeptide repeat protein 5; P53 cofactor, | 99.27 | |
| 1fch_A | 368 | Peroxisomal targeting signal 1 receptor; protein-p | 99.26 | |
| 3fp2_A | 537 | TPR repeat-containing protein YHR117W; TOM71, mito | 99.26 | |
| 2q7f_A | 243 | YRRB protein; TPR, protein binding; 2.49A {Bacillu | 99.26 | |
| 2ho1_A | 252 | Type 4 fimbrial biogenesis protein PILF; type IV p | 99.25 | |
| 3u4t_A | 272 | TPR repeat-containing protein; structural genomics | 99.24 | |
| 3u4t_A | 272 | TPR repeat-containing protein; structural genomics | 99.24 | |
| 3mkr_A | 291 | Coatomer subunit epsilon; tetratricopeptide repeat | 99.24 | |
| 2vq2_A | 225 | PILW, putative fimbrial biogenesis and twitching m | 99.24 | |
| 1qqe_A | 292 | Vesicular transport protein SEC17; helix-turn-heli | 99.23 | |
| 3qky_A | 261 | Outer membrane assembly lipoprotein YFIO; membrane | 99.23 | |
| 1w3b_A | 388 | UDP-N-acetylglucosamine--peptide N-acetylglucosami | 99.23 | |
| 1p5q_A | 336 | FKBP52, FK506-binding protein 4; isomerase; 2.80A | 99.23 | |
| 2ho1_A | 252 | Type 4 fimbrial biogenesis protein PILF; type IV p | 99.23 | |
| 4gcn_A | 127 | Protein STI-1; structural genomics, PSI-biology, m | 99.23 | |
| 3ieg_A | 359 | DNAJ homolog subfamily C member 3; TPR motif, chap | 99.23 | |
| 1w3b_A | 388 | UDP-N-acetylglucosamine--peptide N-acetylglucosami | 99.22 | |
| 2xcb_A | 142 | PCRH, regulatory protein PCRH; protein transport, | 99.21 | |
| 3cv0_A | 327 | Peroxisome targeting signal 1 receptor PEX5; TPR m | 99.21 | |
| 3hym_B | 330 | Cell division cycle protein 16 homolog; APC, anaph | 99.21 | |
| 3cv0_A | 327 | Peroxisome targeting signal 1 receptor PEX5; TPR m | 99.2 | |
| 1a17_A | 166 | Serine/threonine protein phosphatase 5; hydrolase, | 99.19 | |
| 2y4t_A | 450 | DNAJ homolog subfamily C member 3; chaperone, endo | 99.19 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.18 | |
| 3hym_B | 330 | Cell division cycle protein 16 homolog; APC, anaph | 99.18 | |
| 2vq2_A | 225 | PILW, putative fimbrial biogenesis and twitching m | 99.18 | |
| 1qqe_A | 292 | Vesicular transport protein SEC17; helix-turn-heli | 99.18 | |
| 1xnf_A | 275 | Lipoprotein NLPI; TPR, tetratricopeptide, structur | 99.16 | |
| 2yhc_A | 225 | BAMD, UPF0169 lipoprotein YFIO; essential BAM comp | 99.16 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 99.15 | |
| 2lni_A | 133 | Stress-induced-phosphoprotein 1; structural genomi | 99.13 | |
| 3dra_A | 306 | Protein farnesyltransferase/geranylgeranyltransfer | 99.12 | |
| 3mkr_A | 291 | Coatomer subunit epsilon; tetratricopeptide repeat | 99.11 | |
| 2if4_A | 338 | ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, | 99.1 | |
| 2l6j_A | 111 | TPR repeat-containing protein associated with HSP; | 99.1 | |
| 3u3w_A | 293 | Transcriptional activator PLCR protein; ternary co | 99.08 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 99.07 | |
| 1kt0_A | 457 | FKBP51, 51 kDa FK506-binding protein; FKBP-like pp | 99.06 | |
| 3fp2_A | 537 | TPR repeat-containing protein YHR117W; TOM71, mito | 99.06 | |
| 1na3_A | 91 | Designed protein CTPR2; de novo protein; HET: IPT; | 99.06 | |
| 2fbn_A | 198 | 70 kDa peptidylprolyl isomerase, putative; sulfur | 99.06 | |
| 2vyi_A | 131 | SGTA protein; chaperone, TPR repeat, phosphoprotei | 99.05 | |
| 4g1t_A | 472 | Interferon-induced protein with tetratricopeptide | 99.05 | |
| 3k9i_A | 117 | BH0479 protein; putative protein binding protein, | 99.04 | |
| 3edt_B | 283 | KLC 2, kinesin light chain 2; superhelical, struct | 99.04 | |
| 2qfc_A | 293 | PLCR protein; TPR, HTH, transcription regulation; | 99.03 | |
| 2xpi_A | 597 | Anaphase-promoting complex subunit CUT9; cell cycl | 99.03 | |
| 3edt_B | 283 | KLC 2, kinesin light chain 2; superhelical, struct | 99.02 | |
| 2qfc_A | 293 | PLCR protein; TPR, HTH, transcription regulation; | 99.02 | |
| 3rkv_A | 162 | Putative peptidylprolyl isomerase; structural geno | 99.02 | |
| 3sz7_A | 164 | HSC70 cochaperone (SGT); TPR domain, GET4, GET5, G | 99.02 | |
| 2ond_A | 308 | Cleavage stimulation factor 77 kDa subunit; HAT do | 99.01 | |
| 2xpi_A | 597 | Anaphase-promoting complex subunit CUT9; cell cycl | 99.01 | |
| 1ihg_A | 370 | Cyclophilin 40; ppiase immunophilin tetratricopept | 99.01 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.0 | |
| 2ifu_A | 307 | Gamma-SNAP; membrane fusion, snare complex disasse | 99.0 | |
| 2r5s_A | 176 | Uncharacterized protein VP0806; APC090868.1, vibri | 99.0 | |
| 2kck_A | 112 | TPR repeat; tetratricopeptide repeat, structural g | 99.0 | |
| 3ro3_A | 164 | PINS homolog, G-protein-signaling modulator 2; asy | 99.0 | |
| 3nf1_A | 311 | KLC 1, kinesin light chain 1; TPR, structural geno | 98.99 | |
| 3upv_A | 126 | Heat shock protein STI1; TPR-fold, adaptor protein | 98.99 | |
| 3u3w_A | 293 | Transcriptional activator PLCR protein; ternary co | 98.98 | |
| 2gw1_A | 514 | Mitochondrial precursor proteins import receptor; | 98.98 | |
| 3ro2_A | 338 | PINS homolog, G-protein-signaling modulator 2; TPR | 98.98 | |
| 3ulq_A | 383 | Response regulator aspartate phosphatase F; tetrat | 98.98 | |
| 4a1s_A | 411 | PINS, partner of inscuteable; cell cycle, LGN, mit | 98.98 | |
| 2hr2_A | 159 | Hypothetical protein; alpha-alpha superhelix fold, | 98.97 | |
| 3q7a_A | 349 | Farnesyltransferase alpha subunit; protein prenylt | 98.97 | |
| 3qou_A | 287 | Protein YBBN; thioredoxin-like fold, tetratricopep | 98.96 | |
| 3n71_A | 490 | Histone lysine methyltransferase SMYD1; heart deve | 98.96 | |
| 2ifu_A | 307 | Gamma-SNAP; membrane fusion, snare complex disasse | 98.96 | |
| 1zu2_A | 158 | Mitochondrial import receptor subunit TOM20-3; TPR | 98.96 | |
| 1hxi_A | 121 | PEX5, peroxisome targeting signal 1 receptor PEX5; | 98.96 | |
| 1ouv_A | 273 | Conserved hypothetical secreted protein; TPR repea | 98.96 | |
| 3dra_A | 306 | Protein farnesyltransferase/geranylgeranyltransfer | 98.96 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 98.95 | |
| 3gw4_A | 203 | Uncharacterized protein; structural genomics, PSI- | 98.95 | |
| 3sf4_A | 406 | G-protein-signaling modulator 2; tetratricopeptide | 98.94 | |
| 3q49_B | 137 | STIP1 homology and U box-containing protein 1; E3 | 98.94 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 98.94 | |
| 2ond_A | 308 | Cleavage stimulation factor 77 kDa subunit; HAT do | 98.93 | |
| 3ma5_A | 100 | Tetratricopeptide repeat domain protein; NESG, str | 98.93 | |
| 3q15_A | 378 | PSP28, response regulator aspartate phosphatase H; | 98.93 | |
| 3ulq_A | 383 | Response regulator aspartate phosphatase F; tetrat | 98.93 | |
| 3ro3_A | 164 | PINS homolog, G-protein-signaling modulator 2; asy | 98.93 | |
| 3bee_A | 93 | Putative YFRE protein; putaive YFRE protein, struc | 98.93 | |
| 2kc7_A | 99 | BFR218_protein; tetratricopeptide repeat, all-alph | 98.92 | |
| 4f3v_A | 282 | ESX-1 secretion system protein ECCA1; tetratricope | 98.9 | |
| 4g1t_A | 472 | Interferon-induced protein with tetratricopeptide | 98.89 | |
| 3qww_A | 433 | SET and MYND domain-containing protein 2; methyltr | 98.89 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 98.88 | |
| 1na0_A | 125 | Designed protein CTPR3; de novo protein; HET: IPT; | 98.88 | |
| 2c2l_A | 281 | CHIP, carboxy terminus of HSP70-interacting protei | 98.88 | |
| 1pc2_A | 152 | Mitochondria fission protein; unknown function; NM | 98.87 | |
| 3nf1_A | 311 | KLC 1, kinesin light chain 1; TPR, structural geno | 98.87 | |
| 1elw_A | 118 | TPR1-domain of HOP; HOP, TPR-domain, peptide-compl | 98.86 | |
| 3dss_A | 331 | Geranylgeranyl transferase type-2 subunit alpha; p | 98.85 | |
| 3q7a_A | 349 | Farnesyltransferase alpha subunit; protein prenylt | 98.83 | |
| 2dba_A | 148 | Smooth muscle cell associated protein-1, isoform 2 | 98.83 | |
| 3dss_A | 331 | Geranylgeranyl transferase type-2 subunit alpha; p | 98.83 | |
| 1ouv_A | 273 | Conserved hypothetical secreted protein; TPR repea | 98.82 | |
| 3q15_A | 378 | PSP28, response regulator aspartate phosphatase H; | 98.79 | |
| 3sf4_A | 406 | G-protein-signaling modulator 2; tetratricopeptide | 98.78 | |
| 3gw4_A | 203 | Uncharacterized protein; structural genomics, PSI- | 98.78 | |
| 3rjv_A | 212 | Putative SEL1 repeat protein; alpha-alpha superhel | 98.78 | |
| 2xev_A | 129 | YBGF; tetratricopeptide, alpha-helical, metal bind | 98.78 | |
| 2kat_A | 115 | Uncharacterized protein; NESG, structure, structur | 98.77 | |
| 4a1s_A | 411 | PINS, partner of inscuteable; cell cycle, LGN, mit | 98.76 | |
| 2v5f_A | 104 | Prolyl 4-hydroxylase subunit alpha-1; endoplasmic | 98.76 | |
| 3ly7_A | 372 | Transcriptional activator CADC; alpha/beta domain, | 98.75 | |
| 3rjv_A | 212 | Putative SEL1 repeat protein; alpha-alpha superhel | 98.74 | |
| 3qwp_A | 429 | SET and MYND domain-containing protein 3; SMYD3,SE | 98.74 | |
| 3ro2_A | 338 | PINS homolog, G-protein-signaling modulator 2; TPR | 98.72 | |
| 1klx_A | 138 | Cysteine rich protein B; structural genomics, heli | 98.68 | |
| 4f3v_A | 282 | ESX-1 secretion system protein ECCA1; tetratricope | 98.65 | |
| 1elr_A | 131 | TPR2A-domain of HOP; HOP, TPR-domain, peptide-comp | 98.62 | |
| 2ooe_A | 530 | Cleavage stimulation factor 77 kDa subunit; HAT do | 98.56 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 98.52 | |
| 1hz4_A | 373 | MALT regulatory protein; two-helix bundles, helix | 98.51 | |
| 1hz4_A | 373 | MALT regulatory protein; two-helix bundles, helix | 98.51 | |
| 2ooe_A | 530 | Cleavage stimulation factor 77 kDa subunit; HAT do | 98.45 | |
| 3u64_A | 301 | Protein TP_0956; tetratrico peptide repeat, protei | 98.43 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 98.38 | |
| 3n71_A | 490 | Histone lysine methyltransferase SMYD1; heart deve | 98.37 | |
| 3e4b_A | 452 | ALGK; tetratricopeptide repeat, superhelix, algina | 98.37 | |
| 4gkh_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 98.36 | |
| 2v5f_A | 104 | Prolyl 4-hydroxylase subunit alpha-1; endoplasmic | 98.33 | |
| 2xm6_A | 490 | Protein corresponding to locus C5321 from CFT073 s | 98.32 | |
| 1klx_A | 138 | Cysteine rich protein B; structural genomics, heli | 98.3 | |
| 3bee_A | 93 | Putative YFRE protein; putaive YFRE protein, struc | 98.3 | |
| 2xm6_A | 490 | Protein corresponding to locus C5321 from CFT073 s | 98.24 | |
| 1pc2_A | 152 | Mitochondria fission protein; unknown function; NM | 98.23 | |
| 1nzn_A | 126 | CGI-135 protein, fission protein FIS1P; TPR, unkno | 98.17 | |
| 2yle_A | 229 | Protein spire homolog 1; actin-binding protein, ac | 98.14 | |
| 4b4t_Q | 434 | 26S proteasome regulatory subunit RPN6; hydrolase, | 98.12 | |
| 3ovc_A | 362 | Hygromycin-B 4-O-kinase; aminoglycoside phosphotra | 98.11 | |
| 1xi4_A | 1630 | Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle | 98.11 | |
| 3e4b_A | 452 | ALGK; tetratricopeptide repeat, superhelix, algina | 98.09 | |
| 3mv2_B | 310 | Coatomer subunit epsilon; vesicular membrane coat | 98.0 | |
| 3ats_A | 357 | Putative uncharacterized protein; hypothetical pro | 98.0 | |
| 3mv2_B | 310 | Coatomer subunit epsilon; vesicular membrane coat | 98.0 | |
| 1xi4_A | 1630 | Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle | 97.98 | |
| 3ffl_A | 167 | Anaphase-promoting complex subunit 7; tetratricope | 97.95 | |
| 4b4t_Q | 434 | 26S proteasome regulatory subunit RPN6; hydrolase, | 97.89 | |
| 1b89_A | 449 | Protein (clathrin heavy chain); triskelion, coated | 97.88 | |
| 3d1u_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 97.76 | |
| 2q83_A | 346 | YTAA protein; 2635576, structural genomics, joint | 97.73 | |
| 3u64_A | 301 | Protein TP_0956; tetratrico peptide repeat, protei | 97.72 | |
| 3ly7_A | 372 | Transcriptional activator CADC; alpha/beta domain, | 97.57 | |
| 1b89_A | 449 | Protein (clathrin heavy chain); triskelion, coated | 97.57 | |
| 3qwp_A | 429 | SET and MYND domain-containing protein 3; SMYD3,SE | 97.54 | |
| 3qww_A | 433 | SET and MYND domain-containing protein 2; methyltr | 97.48 | |
| 2olc_A | 397 | MTR kinase, methylthioribose kinase; kinase ADP-2H | 97.46 | |
| 1nzn_A | 126 | CGI-135 protein, fission protein FIS1P; TPR, unkno | 97.44 | |
| 3jr1_A | 312 | Putative fructosamine-3-kinase; YP_719053.1, struc | 97.42 | |
| 1y8m_A | 144 | FIS1; mitochondria, unknown function; NMR {Sacchar | 97.4 | |
| 3o48_A | 134 | Mitochondria fission 1 protein; tetratricopeptide | 97.37 | |
| 3o48_A | 134 | Mitochondria fission 1 protein; tetratricopeptide | 97.19 | |
| 1y8m_A | 144 | FIS1; mitochondria, unknown function; NMR {Sacchar | 97.15 | |
| 2pyw_A | 420 | Uncharacterized protein; 5-methylthioribose kinase | 97.14 | |
| 2ff4_A | 388 | Probable regulatory protein EMBR; winged-helix, te | 97.13 | |
| 3dxq_A | 301 | Choline/ethanolamine kinase family protein; NP_106 | 96.85 | |
| 3csv_A | 333 | Aminoglycoside phosphotransferase; YP_614837.1, ph | 96.78 | |
| 3ffl_A | 167 | Anaphase-promoting complex subunit 7; tetratricope | 96.71 | |
| 4e6h_A | 679 | MRNA 3'-END-processing protein RNA14; HAT domain, | 96.66 | |
| 4e6h_A | 679 | MRNA 3'-END-processing protein RNA14; HAT domain, | 96.52 | |
| 3feg_A | 379 | Choline/ethanolamine kinase; non-protein kinase, c | 96.47 | |
| 4gns_B | 754 | Protein CSD3, chitin biosynthesis protein CHS6; FN | 96.4 |
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-55 Score=402.99 Aligned_cols=243 Identities=18% Similarity=0.234 Sum_probs=196.9
Q ss_pred CCCCccceeeeecceeeeeecCC---ChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICWFHCHLKSSVLES---SDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~~~~~~~~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
||||.||++.+.+ .+++|++.. .....+.|.+|++++++++|||||++++++.+ +.++||||||+||+|.+++..
T Consensus 47 G~fG~Vy~~~~~~-~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy~~gGsL~~~l~~ 124 (307)
T 3omv_A 47 GSFGTVYKGKWHG-DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCEGSSLYKHLHV 124 (307)
T ss_dssp CSSSEEEEEESSS-EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECCSSCBHHHHHHT
T ss_pred CCCcEEEEEEECC-cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEcCCCCCHHHHHhh
Confidence 9999999998765 477777653 33456789999999999999999999999865 568999999999999999964
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC------CccccCcccCC
Q 014484 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------KSYSTNLAFTP 152 (423)
Q Consensus 79 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~------~~~~~t~~y~a 152 (423)
....+++.++..|+.||+.||.|||+++ ||||||||+||||+.++++||+|||+|+..... ....||+.|||
T Consensus 125 -~~~~l~~~~~~~i~~qia~gL~yLH~~~-IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymA 202 (307)
T 3omv_A 125 -QETKFQMFQLIDIARQTAQGMDYLHAKN-IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMA 202 (307)
T ss_dssp -SCCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCCSSSEEEETTEEEEECCCSSCBC------------CCCCTTSCC
T ss_pred -cCCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCccCHHHEEECCCCcEEEeeccCceecccCCcceeecccccCCCccC
Confidence 3457999999999999999999999999 999999999999999999999999999865421 34579999999
Q ss_pred cccccc---CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCc
Q 014484 153 PEYMRT---GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEA 229 (423)
Q Consensus 153 PE~~~~---~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 229 (423)
||++.+ .+|+.++|||||||++|||+||..||............+............+..+++++.+|+.+||+.||
T Consensus 203 PE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dP 282 (307)
T 3omv_A 203 PEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVK 282 (307)
T ss_dssp HHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTSCHHHHHHHHHHTCSSS
T ss_pred HHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccccchHHHHHHHHHHcCCCH
Confidence 999864 35899999999999999999999998753221111111111111112233456778899999999999999
Q ss_pred CCCCCHHHHHHHHHhhhhh
Q 014484 230 RERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 230 ~~Rps~~~vl~~l~~~~~~ 248 (423)
++|||+.+|+++|+.++..
T Consensus 283 ~~RPs~~ei~~~Le~l~~~ 301 (307)
T 3omv_A 283 EERPLFPQILSSIELLQHS 301 (307)
T ss_dssp TTSCCHHHHHHHHHHHHTT
T ss_pred hHCcCHHHHHHHHHHHhcc
Confidence 9999999999999887654
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-55 Score=406.39 Aligned_cols=241 Identities=21% Similarity=0.280 Sum_probs=204.3
Q ss_pred CCCCccceeeee-------cceeeeeecCCCh-hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHH
Q 014484 2 GGRCSKFSICWF-------HCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLA 73 (423)
Q Consensus 2 G~~g~v~~~~~~-------~~~~~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 73 (423)
|+||.||++.+. +..||+|++.... ...+.|.+|+++|++++|||||+++++|.+++..++|||||+||+|.
T Consensus 24 G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~ 103 (299)
T 4asz_A 24 GAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLN 103 (299)
T ss_dssp --CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHH
T ss_pred CCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEcCCCCcHH
Confidence 999999999874 4568888886543 44678999999999999999999999999999999999999999999
Q ss_pred hhhccC-----------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-
Q 014484 74 KHLFHW-----------ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG- 141 (423)
Q Consensus 74 ~~i~~~-----------~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~- 141 (423)
+++... ....+++.+++.|+.||+.||.|||+++ ||||||||+|||++.++++||+|||+++.....
T Consensus 104 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~-iiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~ 182 (299)
T 4asz_A 104 KFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH-FVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTD 182 (299)
T ss_dssp HHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGG
T ss_pred HHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCccCHhhEEECCCCcEEECCcccceecCCCC
Confidence 999642 2357999999999999999999999999 999999999999999999999999999865432
Q ss_pred -----CccccCcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHH
Q 014484 142 -----KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGT 215 (423)
Q Consensus 142 -----~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (423)
....||+.|||||++.+..++.++|||||||++|||+| |..||...... .+...+........|..+|+
T Consensus 183 ~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~-----~~~~~i~~~~~~~~p~~~~~ 257 (299)
T 4asz_A 183 YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN-----EVIECITQGRVLQRPRTCPQ 257 (299)
T ss_dssp CEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-----HHHHHHHHTCCCCCCTTCCH
T ss_pred ceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH-----HHHHHHHcCCCCCCCccchH
Confidence 23458999999999999999999999999999999998 88888764222 22222223333456677889
Q ss_pred HHHHHHHHhcccCcCCCCCHHHHHHHHHhhhhh
Q 014484 216 ELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 216 ~l~~li~~cl~~dp~~Rps~~~vl~~l~~~~~~ 248 (423)
++.+|+.+||+.||++|||+++|+..|+.+.+.
T Consensus 258 ~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 258 EVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 999999999999999999999999999887765
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-55 Score=409.38 Aligned_cols=242 Identities=20% Similarity=0.258 Sum_probs=201.6
Q ss_pred CCCCccceeeee-------cceeeeeecCCCh-hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHH
Q 014484 2 GGRCSKFSICWF-------HCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLA 73 (423)
Q Consensus 2 G~~g~v~~~~~~-------~~~~~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 73 (423)
|+||.||++.+. +..||+|++.... ...+.|.+|+++|++++|||||+++++|.+++..|+|||||+||+|.
T Consensus 52 G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~ 131 (329)
T 4aoj_A 52 GAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLN 131 (329)
T ss_dssp CSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHH
T ss_pred CCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCCcHH
Confidence 999999999874 4668888886544 44678999999999999999999999999999999999999999999
Q ss_pred hhhccCC-------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCC
Q 014484 74 KHLFHWE-------------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD 140 (423)
Q Consensus 74 ~~i~~~~-------------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 140 (423)
+++.... .+++++.+++.|+.||+.||.|||+++ ||||||||+||||+.++++||+|||+++....
T Consensus 132 ~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~-iiHRDLKp~NILl~~~~~~Ki~DFGla~~~~~ 210 (329)
T 4aoj_A 132 RFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH-FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYS 210 (329)
T ss_dssp HHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEETTTEEEECCCC-------
T ss_pred HHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC-eecccccHhhEEECCCCcEEEcccccceeccC
Confidence 9986431 246999999999999999999999999 99999999999999999999999999986543
Q ss_pred C------CccccCcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhH
Q 014484 141 G------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDE 213 (423)
Q Consensus 141 ~------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (423)
. ....||+.|||||++.+..++.++|||||||++|||+| |..||...... .+...+........|..+
T Consensus 211 ~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~-----~~~~~i~~g~~~~~p~~~ 285 (329)
T 4aoj_A 211 TDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT-----EAIDCITQGRELERPRAC 285 (329)
T ss_dssp ---------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH-----HHHHHHHHTCCCCCCTTC
T ss_pred CCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH-----HHHHHHHcCCCCCCcccc
Confidence 2 23568999999999999999999999999999999999 88888764222 122222223344566778
Q ss_pred HHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhhhc
Q 014484 214 GTELVRLASRCLQSEARERPNAKSLVISLMSLQKEA 249 (423)
Q Consensus 214 ~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~~~~~ 249 (423)
++++.+|+.+||+.||++|||+++|+++|+.+.+.+
T Consensus 286 ~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~p 321 (329)
T 4aoj_A 286 PPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAP 321 (329)
T ss_dssp CHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSC
T ss_pred cHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCC
Confidence 899999999999999999999999999999987653
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-55 Score=412.05 Aligned_cols=236 Identities=16% Similarity=0.193 Sum_probs=200.5
Q ss_pred CCCCccceeeee--cceeeeeecCCCh---hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
||||.||++.+. +..+++|++.... ...+.+.+|+++|++|+|||||++++++.+++.+|||||||+||+|.++|
T Consensus 35 G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy~~gg~L~~~i 114 (350)
T 4b9d_A 35 GSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRI 114 (350)
T ss_dssp ----CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHH
T ss_pred CCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHH
Confidence 899999999875 7889999886543 34668899999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccCC
Q 014484 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTP 152 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~a 152 (423)
....+..+++.+++.|+.||+.||.|||++| ||||||||+||||+.+|++||+|||+++..... .+..||+.|||
T Consensus 115 ~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GT~~YmA 193 (350)
T 4b9d_A 115 NAQKGVLFQEDQILDWFVQICLALKHVHDRK-ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLS 193 (350)
T ss_dssp HHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT-CEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHHHHHHHSCCTTCC
T ss_pred HHcCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCCHHHEEECCCCCEEEcccccceeecCCcccccccCCCccccC
Confidence 7656667899999999999999999999999 999999999999999999999999999877643 23569999999
Q ss_pred ccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCC
Q 014484 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (423)
Q Consensus 153 PE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (423)
||++.+..|+.++|||||||++|||+||..||........ +..+... .....+..+++++.+||.+||++||++|
T Consensus 194 PE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~----~~~i~~~-~~~~~~~~~s~~~~~li~~~L~~dP~~R 268 (350)
T 4b9d_A 194 PEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNL----VLKIISG-SFPPVSLHYSYDLRSLVSQLFKRNPRDR 268 (350)
T ss_dssp HHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH----HHHHHHT-CCCCCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred HHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH----HHHHHcC-CCCCCCccCCHHHHHHHHHHccCChhHC
Confidence 9999999999999999999999999999999987533222 1122221 1223455678899999999999999999
Q ss_pred CCHHHHHHHHH
Q 014484 233 PNAKSLVISLM 243 (423)
Q Consensus 233 ps~~~vl~~l~ 243 (423)
||++++++|-+
T Consensus 269 ~s~~e~l~hp~ 279 (350)
T 4b9d_A 269 PSVNSILEKGF 279 (350)
T ss_dssp CCHHHHHTSHH
T ss_pred cCHHHHhcCHH
Confidence 99999998854
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-55 Score=403.40 Aligned_cols=238 Identities=16% Similarity=0.185 Sum_probs=202.7
Q ss_pred CCCCccceeeee-------cceeeeeecCCCh--hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICWF-------HCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~~-------~~~~~~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 72 (423)
|+||.||++.+. +..||+|++.... ...+.|.+|+.++.+++|||||+++|+|.+++..++|||||++|+|
T Consensus 37 G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~Ey~~~G~L 116 (308)
T 4gt4_A 37 DRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDL 116 (308)
T ss_dssp CSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCSSCBH
T ss_pred CCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEEEEcCCCCcH
Confidence 999999999984 3568888885433 3467899999999999999999999999999999999999999999
Q ss_pred HhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccC
Q 014484 73 AKHLFHWE--------------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNS 138 (423)
Q Consensus 73 ~~~i~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 138 (423)
.++|.... ...+++.+++.|+.||+.||.|||+++ ||||||||+||||++++++||+|||+++..
T Consensus 117 ~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~-iiHRDLK~~NILl~~~~~~Ki~DFGlar~~ 195 (308)
T 4gt4_A 117 HEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH-VVHKDLATRNVLVYDKLNVKISDLGLFREV 195 (308)
T ss_dssp HHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCSCCBCGG
T ss_pred HHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC-CCCCCccccceEECCCCCEEECCcccceec
Confidence 99995321 246999999999999999999999999 999999999999999999999999999865
Q ss_pred CC------CCccccCcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCCh
Q 014484 139 RD------GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSN 211 (423)
Q Consensus 139 ~~------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (423)
.. .....||+.|||||++.++.++.++|||||||++|||+| |..||.+... ..+...+......+.|.
T Consensus 196 ~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~-----~~~~~~i~~~~~~~~p~ 270 (308)
T 4gt4_A 196 YAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN-----QDVVEMIRNRQVLPCPD 270 (308)
T ss_dssp GGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH-----HHHHHHHHTTCCCCCCT
T ss_pred cCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHHcCCCCCCcc
Confidence 32 234568999999999999999999999999999999998 7888876422 22233333334445677
Q ss_pred hHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhh
Q 014484 212 DEGTELVRLASRCLQSEARERPNAKSLVISLMSL 245 (423)
Q Consensus 212 ~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~ 245 (423)
.+|+++.+++.+||+.||++|||+.+|+++|+.+
T Consensus 271 ~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 271 DCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred cchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 7889999999999999999999999999999764
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-54 Score=444.31 Aligned_cols=226 Identities=19% Similarity=0.226 Sum_probs=183.5
Q ss_pred CCCCccceeeee---cceeeeeecCCC--hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCc-----eeEEEecCCCCC
Q 014484 2 GGRCSKFSICWF---HCHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADE-----RLLVAEFMPNET 71 (423)
Q Consensus 2 G~~g~v~~~~~~---~~~~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-----~~lv~e~~~~~~ 71 (423)
||||.||.+.+. +..+++|++... ......+.+|++++.+++||||+++++++...+. .|+||||++|++
T Consensus 91 G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~E~~~g~~ 170 (681)
T 2pzi_A 91 GGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQS 170 (681)
T ss_dssp ETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEEEEECCCCEE
T ss_pred CCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEEEEEeCCCCc
Confidence 899999999984 567888877543 2345678899999999999999999999998776 699999999999
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCCccccCcccC
Q 014484 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFT 151 (423)
Q Consensus 72 L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~t~~y~ 151 (423)
|.+++. ..+++.+++.++.||+.||.|||++| |+||||||+|||++.+ .+||+|||+++.........||+.|+
T Consensus 171 L~~~~~----~~l~~~~~~~~~~qi~~aL~~lH~~g-iiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~~~~~gt~~y~ 244 (681)
T 2pzi_A 171 LKRSKG----QKLPVAEAIAYLLEILPALSYLHSIG-LVYNDLKPENIMLTEE-QLKLIDLGAVSRINSFGYLYGTPGFQ 244 (681)
T ss_dssp CC--------CCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECSS-CEEECCCTTCEETTCCSCCCCCTTTS
T ss_pred HHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHCC-CeecccChHHeEEeCC-cEEEEecccchhcccCCccCCCcccc
Confidence 998773 27999999999999999999999999 9999999999999875 89999999999888777788999999
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCC
Q 014484 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARE 231 (423)
Q Consensus 152 aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (423)
|||++.+. ++.++|||||||++|+|++|.+|+...... .. .........++.+.++|.+||+.||.+
T Consensus 245 aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~---------~~---~~~~~~~~~~~~l~~li~~~l~~dP~~ 311 (681)
T 2pzi_A 245 APEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVD---------GL---PEDDPVLKTYDSYGRLLRRAIDPDPRQ 311 (681)
T ss_dssp CTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECS---------SC---CTTCHHHHHCHHHHHHHHHHTCSSGGG
T ss_pred CHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcccccc---------cc---cccccccccCHHHHHHHhhhccCChhh
Confidence 99998765 488999999999999999998765432100 00 000111234578999999999999999
Q ss_pred CCC-HHHHHHHHHhhh
Q 014484 232 RPN-AKSLVISLMSLQ 246 (423)
Q Consensus 232 Rps-~~~vl~~l~~~~ 246 (423)
||+ ++++.+.+..+.
T Consensus 312 R~~~~~~l~~~l~~~~ 327 (681)
T 2pzi_A 312 RFTTAEEMSAQLTGVL 327 (681)
T ss_dssp SCSSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH
Confidence 995 555666665544
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-54 Score=404.39 Aligned_cols=234 Identities=19% Similarity=0.233 Sum_probs=199.8
Q ss_pred CCCCccceeeee--cceeeeeecCCChh-hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDL-GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
|+||.||++.+. +..+|+|++..... ..+.+.+|+++|+.++|||||+++++|.+++.+|||||||+||+|.+++.+
T Consensus 85 G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~ 164 (346)
T 4fih_A 85 GSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH 164 (346)
T ss_dssp CSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTTEEHHHHHHH
T ss_pred CcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHc
Confidence 999999999985 77899988854432 356788999999999999999999999999999999999999999999954
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccCCcc
Q 014484 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPPE 154 (423)
Q Consensus 79 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~aPE 154 (423)
+.+++.++..++.||+.||.|||+++ ||||||||+|||++.+|++||+|||+++..... .+.+||+.|||||
T Consensus 165 ---~~l~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPE 240 (346)
T 4fih_A 165 ---TRMNEEQIAAVCLAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPE 240 (346)
T ss_dssp ---SCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHH
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCCHHHEEECCCCCEEEecCcCceecCCCCCcccccccCcCcCCHH
Confidence 46999999999999999999999999 999999999999999999999999999876533 4567999999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccc-cccCCCChhHHHHHHHHHHHhcccCcCCCC
Q 014484 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS-ALEGHFSNDEGTELVRLASRCLQSEARERP 233 (423)
Q Consensus 155 ~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 233 (423)
++.+..|+.++|||||||++|||++|.+||........ +..+... ......+..+++++.+||.+||++||++||
T Consensus 241 vl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~----~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ 316 (346)
T 4fih_A 241 LISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA----MKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRA 316 (346)
T ss_dssp HHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH----HHHHHHSSCCCCSCGGGSCHHHHHHHHHHSCSSTTTSC
T ss_pred HHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH----HHHHHcCCCCCCCccccCCHHHHHHHHHHcCCChhHCc
Confidence 99999999999999999999999999999876432211 1111111 111123346788999999999999999999
Q ss_pred CHHHHHHHHH
Q 014484 234 NAKSLVISLM 243 (423)
Q Consensus 234 s~~~vl~~l~ 243 (423)
|++|+++|-+
T Consensus 317 ta~e~l~Hp~ 326 (346)
T 4fih_A 317 TAAELLKHPF 326 (346)
T ss_dssp CHHHHTTCGG
T ss_pred CHHHHhcCHh
Confidence 9999998854
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-54 Score=401.58 Aligned_cols=236 Identities=17% Similarity=0.125 Sum_probs=199.9
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW 79 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~ 79 (423)
|+||.||++.+. +..+|+|++..... +.+|+.++..++|||||+++++|.+++.+|||||||+||+|.+++++
T Consensus 69 G~fG~Vy~a~~~~~g~~vAiK~i~~~~~----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~- 143 (336)
T 4g3f_A 69 GSFGEVHRMKDKQTGFQCAVKKVRLEVF----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQ- 143 (336)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEETTTC----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHH-
T ss_pred CCCeEEEEEEECCCCCEEEEEEECHHHh----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcHHHHHHH-
Confidence 899999999985 78899998865432 35799999999999999999999999999999999999999999964
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCC-CeEEccccccccCCCC---------CccccCcc
Q 014484 80 ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG-NPRLSSFGLMKNSRDG---------KSYSTNLA 149 (423)
Q Consensus 80 ~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~-~~kl~Dfg~~~~~~~~---------~~~~~t~~ 149 (423)
.+.+++..+..++.||+.||.|||+++ ||||||||+||||+.+| ++||+|||+++..... ....||+.
T Consensus 144 -~~~l~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~ 221 (336)
T 4g3f_A 144 -MGCLPEDRALYYLGQALEGLEYLHTRR-ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTET 221 (336)
T ss_dssp -HSSCCHHHHHHHHHHHHHHHHHHHTTT-EECSCCCGGGEEECTTSCCEEECCCTTCEEC------------CCCCCCGG
T ss_pred -cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccceecCCccccCcc
Confidence 457999999999999999999999999 99999999999999988 6999999999865432 23469999
Q ss_pred cCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccc-cccCCCChhHHHHHHHHHHHhcccC
Q 014484 150 FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS-ALEGHFSNDEGTELVRLASRCLQSE 228 (423)
Q Consensus 150 y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~d 228 (423)
|||||++.+..|+.++|||||||++|||+||..||...... .....+... .....+++.+++++.++|.+||++|
T Consensus 222 YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~----~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~d 297 (336)
T 4g3f_A 222 HMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRG----PLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKE 297 (336)
T ss_dssp GCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCS----CCHHHHHHSCCGGGGSCTTSCHHHHHHHHHHTCSS
T ss_pred ccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH----HHHHHHHcCCCCchhcCccCCHHHHHHHHHHccCC
Confidence 99999999999999999999999999999999998764211 111111111 1112356677889999999999999
Q ss_pred cCCCCCHHHHHHHHHhhhhh
Q 014484 229 ARERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 229 p~~Rps~~~vl~~l~~~~~~ 248 (423)
|.+|||+.|++++|......
T Consensus 298 P~~R~sa~el~~~l~~~l~~ 317 (336)
T 4g3f_A 298 PVHRASAMELRRKVGKALQE 317 (336)
T ss_dssp GGGSCCHHHHHHHHHHHHHH
T ss_pred HhHCcCHHHHHHHHHHHHhh
Confidence 99999999999999887654
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-53 Score=391.68 Aligned_cols=235 Identities=17% Similarity=0.200 Sum_probs=192.0
Q ss_pred CCCCccceeeee--cceeeeeecCCC---hhhHHHHHHHHHHHhcCCCCCccceEeEEEe----CCceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYE----ADERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~~lv~e~~~~~~L 72 (423)
||||.||++.+. +..+|+|.+... ....+.|.+|++++++|+|||||+++++|.+ ++.+|||||||+||+|
T Consensus 37 G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy~~gg~L 116 (290)
T 3fpq_A 37 GSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTL 116 (290)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEECCCSCBH
T ss_pred CcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeCCCCCCH
Confidence 999999999985 677888877543 3345678999999999999999999999976 2457999999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCC-CeeeccCCCCCeeecC-CCCeEEccccccccCCCC--CccccCc
Q 014484 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKG-RALYHDLNAYRILFDK-DGNPRLSSFGLMKNSRDG--KSYSTNL 148 (423)
Q Consensus 73 ~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-~iiH~dlkp~Nill~~-~~~~kl~Dfg~~~~~~~~--~~~~~t~ 148 (423)
.+++.+ .+.+++..+..|+.||+.||.|||+++ +||||||||+|||++. +|.+||+|||+|+..... .+..||+
T Consensus 117 ~~~l~~--~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~~~~~~~GTp 194 (290)
T 3fpq_A 117 KTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTP 194 (290)
T ss_dssp HHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBEESCSSC
T ss_pred HHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCCccCCcccCc
Confidence 999964 457999999999999999999999986 3999999999999974 789999999999865543 3467999
Q ss_pred ccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccC
Q 014484 149 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSE 228 (423)
Q Consensus 149 ~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 228 (423)
.|||||++.+ +|+.++|||||||++|||+||..||......... ...+........++...++++.+||.+||+.|
T Consensus 195 ~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~li~~~L~~d 270 (290)
T 3fpq_A 195 EFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQI---YRRVTSGVKPASFDKVAIPEVKEIIEGCIRQN 270 (290)
T ss_dssp CCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHH---HHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSS
T ss_pred cccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHH---HHHHHcCCCCCCCCccCCHHHHHHHHHHccCC
Confidence 9999999874 6999999999999999999999998653211111 11111111112233445678999999999999
Q ss_pred cCCCCCHHHHHHHH
Q 014484 229 ARERPNAKSLVISL 242 (423)
Q Consensus 229 p~~Rps~~~vl~~l 242 (423)
|++|||++++++|-
T Consensus 271 P~~R~s~~e~l~Hp 284 (290)
T 3fpq_A 271 KDERYSIKDLLNHA 284 (290)
T ss_dssp GGGSCCHHHHHTSG
T ss_pred hhHCcCHHHHhcCc
Confidence 99999999999874
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-54 Score=395.46 Aligned_cols=232 Identities=16% Similarity=0.166 Sum_probs=199.7
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.+. +..+|+|++.+.. .....+.+|+++|++|+|||||+++++|.+++.+|+|||||+||+|.++
T Consensus 43 G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmEy~~gG~L~~~ 122 (311)
T 4aw0_A 43 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKY 122 (311)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHH
T ss_pred ccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCCHHHH
Confidence 899999999985 7789999886533 2356789999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC------CccccCcc
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------KSYSTNLA 149 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~------~~~~~t~~ 149 (423)
+.+ .+.+++..+..++.||+.||.|||+++ |+||||||+|||++.+|++||+|||+|+..... .+.+||+.
T Consensus 123 i~~--~~~l~e~~~~~~~~qi~~al~ylH~~~-IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~~~~~~~GTp~ 199 (311)
T 4aw0_A 123 IRK--IGSFDETCTRFYTAEIVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 199 (311)
T ss_dssp HHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTCCCBCCCCSCGG
T ss_pred HHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCcccccCcccCcc
Confidence 964 457999999999999999999999999 999999999999999999999999999865422 34679999
Q ss_pred cCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCc
Q 014484 150 FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEA 229 (423)
Q Consensus 150 y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 229 (423)
|||||++.+..|+.++|||||||++|+|+||..||......... ..+... ...++..+++++.+||.+||++||
T Consensus 200 YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~----~~i~~~--~~~~p~~~s~~~~dli~~lL~~dp 273 (311)
T 4aw0_A 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIF----AKIIKL--EYDFPEKFFPKARDLVEKLLVLDA 273 (311)
T ss_dssp GCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHHT--CCCCCTTCCHHHHHHHHHHSCSSG
T ss_pred cCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH----HHHHcC--CCCCCcccCHHHHHHHHHHccCCH
Confidence 99999999999999999999999999999999999765332221 122211 124566778899999999999999
Q ss_pred CCCCCHHHHHHHH
Q 014484 230 RERPNAKSLVISL 242 (423)
Q Consensus 230 ~~Rps~~~vl~~l 242 (423)
++|||++|++.+-
T Consensus 274 ~~R~t~~e~~~~~ 286 (311)
T 4aw0_A 274 TKRLGCEEMEGYG 286 (311)
T ss_dssp GGSTTSGGGTCHH
T ss_pred hHCcChHHHcCCH
Confidence 9999999976553
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-53 Score=383.54 Aligned_cols=233 Identities=17% Similarity=0.171 Sum_probs=187.7
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||++.+. +..+++|++.+.. .....+.+|+++++.++|||||++++++.+++..|+||||| +|+|.++
T Consensus 24 G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~-~g~L~~~ 102 (275)
T 3hyh_A 24 GSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDY 102 (275)
T ss_dssp ---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC-CEEHHHH
T ss_pred CcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEeCC-CCCHHHH
Confidence 899999999874 7889999886543 23557899999999999999999999999999999999999 6799999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC---CccccCcccCC
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTP 152 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~~t~~y~a 152 (423)
+.+ .+.+++.++..++.||+.||+|||+++ |+||||||+|||++.+|++||+|||+|+..... .+..||+.|||
T Consensus 103 l~~--~~~l~e~~~~~~~~qi~~al~ylH~~~-IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~~~~GT~~Y~A 179 (275)
T 3hyh_A 103 IVQ--RDKMSEQEARRFFQQIISAVEYCHRHK-IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAA 179 (275)
T ss_dssp HHH--SCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCTTTEEECTTCCEEECCSSCC---------------CTTSC
T ss_pred HHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCChHHeEECCCCCEEEeecCCCeecCCCCccCCeeECcccCC
Confidence 864 457999999999999999999999999 999999999999999999999999999865543 44679999999
Q ss_pred ccccccCCC-CCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCC
Q 014484 153 PEYMRTGRV-TPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARE 231 (423)
Q Consensus 153 PE~~~~~~~-~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (423)
||++.+..+ +.++||||+||++|+|+||..||......... ..+.. ....++..+++++.+||.+||+.||++
T Consensus 180 PE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~----~~i~~--~~~~~p~~~s~~~~~li~~~L~~dP~~ 253 (275)
T 3hyh_A 180 PEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLF----KNISN--GVYTLPKFLSPGAAGLIKRMLIVNPLN 253 (275)
T ss_dssp HHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHH--TCCCCCTTSCHHHHHHHHHHSCSSGGG
T ss_pred hhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHH----HHHHc--CCCCCCCCCCHHHHHHHHHHccCChhH
Confidence 999998876 57999999999999999999999765332221 11111 122355667889999999999999999
Q ss_pred CCCHHHHHHHHHh
Q 014484 232 RPNAKSLVISLMS 244 (423)
Q Consensus 232 Rps~~~vl~~l~~ 244 (423)
|||++|+++|-+-
T Consensus 254 R~s~~eil~hpw~ 266 (275)
T 3hyh_A 254 RISIHEIMQDDWF 266 (275)
T ss_dssp SCCHHHHHHCHHH
T ss_pred CcCHHHHHcCccc
Confidence 9999999998653
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-53 Score=405.58 Aligned_cols=234 Identities=19% Similarity=0.233 Sum_probs=199.7
Q ss_pred CCCCccceeeee--cceeeeeecCCCh-hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
|+||.||++.+. +..+|+|++.... ...+.+.+|+.+|+.++|||||+++++|.+++.+|||||||+||+|.+++..
T Consensus 162 G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~gG~L~~~i~~ 241 (423)
T 4fie_A 162 GSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH 241 (423)
T ss_dssp CSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHH
T ss_pred CcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCCCcHHHHHhc
Confidence 999999999985 7889998886544 3356788999999999999999999999999999999999999999999953
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccCCcc
Q 014484 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPPE 154 (423)
Q Consensus 79 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~aPE 154 (423)
+.+++.++..++.||+.||.|||++| ||||||||+||||+.+|.+||+|||+++..... .+.+||+.|||||
T Consensus 242 ---~~l~e~~~~~~~~qil~aL~ylH~~~-IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPE 317 (423)
T 4fie_A 242 ---TRMNEEQIAAVCLAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPE 317 (423)
T ss_dssp ---SCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBCCCEECTTTCCHH
T ss_pred ---cCCCHHHHHHHHHHHHHHHHHHHHCC-eecccCCHHHEEEcCCCCEEEecCccceECCCCCccccccccCcCcCCHH
Confidence 46999999999999999999999999 999999999999999999999999999876533 3567999999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccc-cccCCCChhHHHHHHHHHHHhcccCcCCCC
Q 014484 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS-ALEGHFSNDEGTELVRLASRCLQSEARERP 233 (423)
Q Consensus 155 ~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 233 (423)
++.+..|+.++|||||||++|||++|..||........ +..+... ......+..+++++.+||.+||++||++||
T Consensus 318 vl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~----~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ 393 (423)
T 4fie_A 318 LISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA----MKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRA 393 (423)
T ss_dssp HHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH----HHHHHHSCCCCCSCTTSSCHHHHHHHHHHSCSSTTTSC
T ss_pred HHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH----HHHHHcCCCCCCcccccCCHHHHHHHHHHcCCChhHCc
Confidence 99999999999999999999999999999876432211 1111111 111123345788999999999999999999
Q ss_pred CHHHHHHHHH
Q 014484 234 NAKSLVISLM 243 (423)
Q Consensus 234 s~~~vl~~l~ 243 (423)
|++|+++|-+
T Consensus 394 ta~ell~Hp~ 403 (423)
T 4fie_A 394 TAAELLKHPF 403 (423)
T ss_dssp CHHHHTTCGG
T ss_pred CHHHHhcCHH
Confidence 9999998844
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-52 Score=395.64 Aligned_cols=242 Identities=19% Similarity=0.283 Sum_probs=203.0
Q ss_pred CCCCccceeeeec-------ceeeeeecCCCh--hhHHHHHHHHHHHhcCCC-CCccceEeEEEeC-CceeEEEecCCCC
Q 014484 2 GGRCSKFSICWFH-------CHLKSSVLESSD--LGETLNLEEAKAVGNLRS-ERLANLIGCCYEA-DERLLVAEFMPNE 70 (423)
Q Consensus 2 G~~g~v~~~~~~~-------~~~~~~~~~~~~--~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~-~~~~lv~e~~~~~ 70 (423)
|+||.||++.+.+ ..|++|.+.... .....|.+|+++|.+++| ||||+++++|.+. +.+++|||||++|
T Consensus 75 G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~iV~Ey~~~G 154 (353)
T 4ase_A 75 GAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 154 (353)
T ss_dssp CSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEEECCTTE
T ss_pred CCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEEEEEcCCCC
Confidence 9999999999864 357777775433 345679999999999965 8999999999765 5689999999999
Q ss_pred CHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccc
Q 014484 71 TLAKHLFHWE--------------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK 136 (423)
Q Consensus 71 ~L~~~i~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~ 136 (423)
+|.++|+... ...+++..++.++.||+.||.|||+++ ||||||||+|||++.++.+||+|||+|+
T Consensus 155 ~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~-iiHRDLK~~NILl~~~~~vKi~DFGlar 233 (353)
T 4ase_A 155 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSEKNVVKICDFGLAR 233 (353)
T ss_dssp EHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCGGGS
T ss_pred CHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC-eecCccCccceeeCCCCCEEECcchhhh
Confidence 9999996421 345899999999999999999999999 9999999999999999999999999998
Q ss_pred cCCCCC------ccccCcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCC
Q 014484 137 NSRDGK------SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHF 209 (423)
Q Consensus 137 ~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (423)
...... ...||+.|||||++.+..|+.++|||||||++|||+| |..||.+... ...+...+........
T Consensus 234 ~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~----~~~~~~~i~~g~~~~~ 309 (353)
T 4ase_A 234 DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI----DEEFCRRLKEGTRMRA 309 (353)
T ss_dssp CTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC----SHHHHHHHHHTCCCCC
T ss_pred hcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCH----HHHHHHHHHcCCCCCC
Confidence 764332 3457899999999999999999999999999999998 8888876421 1223333333444556
Q ss_pred ChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhhh
Q 014484 210 SNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 210 ~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~~~~ 248 (423)
|..+++++.+++.+||+.||++|||+.+|+++|..+.+.
T Consensus 310 p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~ 348 (353)
T 4ase_A 310 PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 348 (353)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence 777889999999999999999999999999999987654
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-53 Score=389.92 Aligned_cols=233 Identities=18% Similarity=0.208 Sum_probs=191.6
Q ss_pred CCCCccceeeee-----cceeeeeecCCCh---hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHH
Q 014484 2 GGRCSKFSICWF-----HCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLA 73 (423)
Q Consensus 2 G~~g~v~~~~~~-----~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 73 (423)
|+||.||.+... +..+|+|++.... .....+.+|+++|.+++|||||++++++.+++.+|+|||||+||+|.
T Consensus 35 G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy~~gg~L~ 114 (304)
T 3ubd_A 35 GSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLF 114 (304)
T ss_dssp GGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEEECCCTTCEEH
T ss_pred CCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEEcCCCCCHH
Confidence 899999999763 4568888876533 23446889999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCC----CCccccCcc
Q 014484 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNLA 149 (423)
Q Consensus 74 ~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~~t~~ 149 (423)
+++.+ .+.+++..+..++.||+.||.|||+++ |+||||||+|||++.+|++||+|||+|+.... ..+..||+.
T Consensus 115 ~~l~~--~~~l~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GT~~ 191 (304)
T 3ubd_A 115 TRLSK--EVMFTEEDVKFYLAELALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVE 191 (304)
T ss_dssp HHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCCGGGEEECTTSCEEEESSEEEEC-----CCCCSCCCCGG
T ss_pred HHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CcCCCCCHHHeEEcCCCCEEecccccceeccCCCccccccccCcc
Confidence 99964 457999999999999999999999999 99999999999999999999999999986532 245679999
Q ss_pred cCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCc
Q 014484 150 FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEA 229 (423)
Q Consensus 150 y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 229 (423)
|||||++.+..|+.++|||||||++|||+||..||......... ..+... ...+|..+|+++.+||.+||++||
T Consensus 192 YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~----~~i~~~--~~~~p~~~s~~~~~li~~~L~~dP 265 (304)
T 3ubd_A 192 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETM----TMILKA--KLGMPQFLSPEAQSLLRMLFKRNP 265 (304)
T ss_dssp GCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHHC--CCCCCTTSCHHHHHHHHHHTCSSG
T ss_pred cCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHH----HHHHcC--CCCCCCcCCHHHHHHHHHHcccCH
Confidence 99999999999999999999999999999999999865332221 112211 224566778999999999999999
Q ss_pred CCCCC-----HHHHHHHHH
Q 014484 230 RERPN-----AKSLVISLM 243 (423)
Q Consensus 230 ~~Rps-----~~~vl~~l~ 243 (423)
++||| ++++++|-+
T Consensus 266 ~~R~ta~~~~~~eil~Hp~ 284 (304)
T 3ubd_A 266 ANRLGAGPDGVEEIKRHSF 284 (304)
T ss_dssp GGSTTCSTTTHHHHHTSGG
T ss_pred HHCCCCCcCCHHHHHcCcc
Confidence 99998 578887743
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-52 Score=385.96 Aligned_cols=243 Identities=15% Similarity=0.202 Sum_probs=193.8
Q ss_pred CCCCccceeeeecceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCC----ceeEEEecCCCCCHHhhhc
Q 014484 2 GGRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEAD----ERLLVAEFMPNETLAKHLF 77 (423)
Q Consensus 2 G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----~~~lv~e~~~~~~L~~~i~ 77 (423)
||||.||++.+.+..||+|++.........+..|+..+.+++|||||+++++|.+++ .+|||||||+||+|.+++.
T Consensus 14 G~fG~Vy~~~~~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~ 93 (303)
T 3hmm_A 14 GRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN 93 (303)
T ss_dssp CSSSEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHH
T ss_pred CCCeEEEEEEECCEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCCCcHHHHHH
Confidence 999999999999999999998776555445556777778899999999999998765 4799999999999999995
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHcC--------CCeeeccCCCCCeeecCCCCeEEccccccccCCCC--------
Q 014484 78 HWETQPMKWAMRLRVALYLAQALEYCSSK--------GRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-------- 141 (423)
Q Consensus 78 ~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--------~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-------- 141 (423)
+ ..++++.+.+++.|++.||.|||++ + ||||||||+|||++.++++||+|||+++.....
T Consensus 94 ~---~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~-IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~ 169 (303)
T 3hmm_A 94 R---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAP 169 (303)
T ss_dssp H---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCC-EECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEESCC-
T ss_pred h---CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC-EeeccCCcccEEECCCCCEEEEeCCCCccccCCCCceeeec
Confidence 3 4699999999999999999999987 7 999999999999999999999999999865432
Q ss_pred CccccCcccCCccccccC------CCCCCcceehhHHHHHHHhhCCCCCCchhhHH----------hhhchhh-hhcccc
Q 014484 142 KSYSTNLAFTPPEYMRTG------RVTPESVVYSFGTMLLDLLSGKHIPPSHALDL----------IRSKNFL-LLMDSA 204 (423)
Q Consensus 142 ~~~~~t~~y~aPE~~~~~------~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~----------~~~~~~~-~~~~~~ 204 (423)
....||+.|||||++.+. .++.++|||||||++|||+||.+|+....... ....... ......
T Consensus 170 ~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 249 (303)
T 3hmm_A 170 NHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQK 249 (303)
T ss_dssp ----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSC
T ss_pred ccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHHHHHhccc
Confidence 234689999999998754 36789999999999999999987653221000 0001111 112223
Q ss_pred ccCCCCh-----hHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhhh
Q 014484 205 LEGHFSN-----DEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 205 ~~~~~~~-----~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~~~~ 248 (423)
..+.+|. +++..+.+++.+||+.||++|||+.+|++.|+++.+.
T Consensus 250 ~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~ 298 (303)
T 3hmm_A 250 LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp CCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence 3333332 3567899999999999999999999999999988765
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-50 Score=374.67 Aligned_cols=230 Identities=18% Similarity=0.270 Sum_probs=178.8
Q ss_pred CCCCccceeeee--cceeeeeecCC--ChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCc------------eeEEEe
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLES--SDLGETLNLEEAKAVGNLRSERLANLIGCCYEADE------------RLLVAE 65 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~------------~~lv~e 65 (423)
||||.||++.+. +..+|+|++.. .....+.+.+|+++|++|+|||||+++++|.+.+. +|+|||
T Consensus 16 G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~l~ivmE 95 (299)
T 4g31_A 16 GGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQ 95 (299)
T ss_dssp CC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------CEEEEEEEE
T ss_pred CCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCCcEEEEEEe
Confidence 999999999985 77888887743 33446788999999999999999999999976553 689999
Q ss_pred cCCCCCHHhhhccCCC-CCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC---
Q 014484 66 FMPNETLAKHLFHWET-QPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--- 141 (423)
Q Consensus 66 ~~~~~~L~~~i~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--- 141 (423)
||+||+|.+++..... ...++..++.++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+|+.....
T Consensus 96 ~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~-IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~~~~~ 174 (299)
T 4g31_A 96 LCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG-LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEE 174 (299)
T ss_dssp CCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCCCCC---------
T ss_pred cCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCc-CccccCcHHHeEECCCCcEEEccCccceecCCCccc
Confidence 9999999999964221 23556778999999999999999999 999999999999999999999999999865432
Q ss_pred -------------CccccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCC
Q 014484 142 -------------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGH 208 (423)
Q Consensus 142 -------------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (423)
.+..||+.|||||++.+..|+.++|||||||++|||++ ||....... ....... ...
T Consensus 175 ~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~---~~~~~~~----~~~ 244 (299)
T 4g31_A 175 QTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERV---RTLTDVR----NLK 244 (299)
T ss_dssp -----------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHH---HHHHHHH----TTC
T ss_pred cccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHH---HHHHHHh----cCC
Confidence 22469999999999999999999999999999999996 554431111 1111111 122
Q ss_pred CCh---hHHHHHHHHHHHhcccCcCCCCCHHHHHHHH
Q 014484 209 FSN---DEGTELVRLASRCLQSEARERPNAKSLVISL 242 (423)
Q Consensus 209 ~~~---~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l 242 (423)
+|+ ..++++.+||.+||+.||++|||+.++++|-
T Consensus 245 ~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~ 281 (299)
T 4g31_A 245 FPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENA 281 (299)
T ss_dssp CCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSG
T ss_pred CCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCH
Confidence 232 3456788999999999999999999999863
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-48 Score=370.29 Aligned_cols=238 Identities=15% Similarity=0.193 Sum_probs=191.2
Q ss_pred CCCCccceeeee--cceeeeeecCCCh---hhHHHHHHHHHHHhcCCCCCccceEeEEEeC------CceeEEEecCCCC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEA------DERLLVAEFMPNE 70 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~~~~lv~e~~~~~ 70 (423)
|+||.||++.+. +..+|+|++.... .....+.+|+++|+.|+|||||++++++... +.+|||||||. |
T Consensus 65 G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~ivmE~~~-g 143 (398)
T 4b99_A 65 GAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLME-S 143 (398)
T ss_dssp CSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEEEEEECCS-E
T ss_pred ccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEEEEEeCCC-C
Confidence 999999999985 7889999886543 3356788999999999999999999998643 56899999996 5
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCC--------CC
Q 014484 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD--------GK 142 (423)
Q Consensus 71 ~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~--------~~ 142 (423)
+|.+++.+ .+.+++..+..++.||+.||.|||++| ||||||||+|||++.+|.+||+|||+++.... ..
T Consensus 144 ~L~~~i~~--~~~l~~~~~~~~~~qil~al~ylH~~~-iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~~~~~~~~~ 220 (398)
T 4b99_A 144 DLHQIIHS--SQPLTLEHVRYFLYQLLRGLKYMHSAQ-VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMT 220 (398)
T ss_dssp EHHHHHTS--SSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTCCEEECCCTTCBCC-------CCCCC
T ss_pred CHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCc-CcCCCcCccccccCCCCCEEEeecceeeecccCccccccccc
Confidence 89999964 567999999999999999999999999 99999999999999999999999999986532 23
Q ss_pred ccccCcccCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccc------------------
Q 014484 143 SYSTNLAFTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS------------------ 203 (423)
Q Consensus 143 ~~~~t~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~------------------ 203 (423)
+..||+.|||||++.+. .++.++||||+||++|||++|.+||.+................+
T Consensus 221 ~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~ 300 (398)
T 4b99_A 221 EYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQ 300 (398)
T ss_dssp SSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHH
T ss_pred cceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhh
Confidence 46899999999998875 46999999999999999999999997653221111110000000
Q ss_pred cccCCC-------ChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 204 ALEGHF-------SNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 204 ~~~~~~-------~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
...... .+..++++.+||.+||++||.+|||++++++|-+
T Consensus 301 ~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~ 347 (398)
T 4b99_A 301 SLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPF 347 (398)
T ss_dssp SSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGG
T ss_pred cCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHh
Confidence 000000 1234678999999999999999999999998854
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-47 Score=363.71 Aligned_cols=235 Identities=18% Similarity=0.203 Sum_probs=186.6
Q ss_pred CCCCccceeeee-----cceeeeeecCCChhhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF-----HCHLKSSVLESSDLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||++... +..+|+|.+.... ....+.+|+++|..+ +|||||+++++|.+++.+|+|||||+||+|.++
T Consensus 32 G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE~~~g~~L~~~ 110 (361)
T 4f9c_A 32 GTFSSVYLATAQLQVGPEEKIALKHLIPTS-HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDI 110 (361)
T ss_dssp CSSEEEEEEEEEBTTSCEEEEEEEEECTTS-CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEECCCCCCHHHH
T ss_pred ccCcEEEEEEEcccCCCCCEEEEEEEcccc-CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEeCCCcccHHHH
Confidence 999999999863 4668888776544 345678999999998 699999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCC-CCeEEccccccccCCCC-------------
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKD-GNPRLSSFGLMKNSRDG------------- 141 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~-~~~kl~Dfg~~~~~~~~------------- 141 (423)
+. .+++.++..++.||+.||.|||++| |+||||||+|||++.+ +.+||+|||+|+.....
T Consensus 111 ~~-----~l~~~~~~~~~~qll~al~ylH~~g-IiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~ 184 (361)
T 4f9c_A 111 LN-----SLSFQEVREYMLNLFKALKRIHQFG-IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQ 184 (361)
T ss_dssp HT-----TCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCGGGGGC-----
T ss_pred Hc-----CCCHHHHHHHHHHHHHHHHHHHHCC-eEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCcccccccccccccc
Confidence 83 4999999999999999999999999 9999999999999876 79999999999754321
Q ss_pred -------------------CccccCcccCCccccccCC-CCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhh---
Q 014484 142 -------------------KSYSTNLAFTPPEYMRTGR-VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFL--- 198 (423)
Q Consensus 142 -------------------~~~~~t~~y~aPE~~~~~~-~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~--- 198 (423)
.+..||+.|+|||++.+.. ++.++||||+||++|||++|..||.........-..+.
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~~~l~~I~~~~ 264 (361)
T 4f9c_A 185 QERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIR 264 (361)
T ss_dssp ---------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHHhc
Confidence 2246899999999998764 89999999999999999999998854321100000000
Q ss_pred ----------------------------hhc------cc------------cccCCCChhHHHHHHHHHHHhcccCcCCC
Q 014484 199 ----------------------------LLM------DS------------ALEGHFSNDEGTELVRLASRCLQSEARER 232 (423)
Q Consensus 199 ----------------------------~~~------~~------------~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (423)
... .. .........+++++.+||.+||+.||++|
T Consensus 265 G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R 344 (361)
T 4f9c_A 265 GSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASR 344 (361)
T ss_dssp CHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHHHHHHHHHTCSCTTTS
T ss_pred CCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHC
Confidence 000 00 00001112356789999999999999999
Q ss_pred CCHHHHHHHHH
Q 014484 233 PNAKSLVISLM 243 (423)
Q Consensus 233 ps~~~vl~~l~ 243 (423)
||++|+++|-+
T Consensus 345 ~ta~eaL~Hp~ 355 (361)
T 4f9c_A 345 ITAEEALLHPF 355 (361)
T ss_dssp CCHHHHHTSGG
T ss_pred cCHHHHhcCcc
Confidence 99999998843
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-47 Score=377.68 Aligned_cols=236 Identities=20% Similarity=0.204 Sum_probs=194.8
Q ss_pred CCCCccceeeee--cceeeeeecCCChh----hHHHHHH---HHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDL----GETLNLE---EAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~----~~~~~~~---E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 72 (423)
||||.||.+... +..+|+|++.+... ....+.+ ++.++..++|||||+++++|.+.+.+|+|||||+||+|
T Consensus 200 G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylVmEy~~GGdL 279 (689)
T 3v5w_A 200 GGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDL 279 (689)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred ccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEEEecCCCCcH
Confidence 999999999985 78899998854331 1223333 46677788999999999999999999999999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC--CccccCccc
Q 014484 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTNLAF 150 (423)
Q Consensus 73 ~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--~~~~~t~~y 150 (423)
.++|.+ .+.+++..+..++.||+.||.|||++| ||||||||+||||+.+|++||+|||+|+..... .+.+||+.|
T Consensus 280 ~~~l~~--~~~l~E~~a~~y~~qIl~aL~yLH~~g-IiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~~~~t~~GTp~Y 356 (689)
T 3v5w_A 280 HYHLSQ--HGVFSEADMRFYAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGY 356 (689)
T ss_dssp HHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCSGGGEEECTTSCEEECCCTTCEECSSCCCCSCCSCGGG
T ss_pred HHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCchHHeEEeCCCCEEecccceeeecCCCCCCCccCCcCc
Confidence 999964 457999999999999999999999999 999999999999999999999999999876543 456899999
Q ss_pred CCcccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCc
Q 014484 151 TPPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEA 229 (423)
Q Consensus 151 ~aPE~~~~-~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 229 (423)
||||++.+ ..|+.++|||||||++|||++|.+||......... ....... .....++..+++++.+||.+||++||
T Consensus 357 mAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~-~i~~~i~--~~~~~~p~~~S~~a~dLI~~lL~~dP 433 (689)
T 3v5w_A 357 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH-EIDRMTL--TMAVELPDSFSPELRSLLEGLLQRDV 433 (689)
T ss_dssp CCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHH-HHHHHHH--HCCCCCCTTSCHHHHHHHHHHTCSCG
T ss_pred cCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH-HHHHhhc--CCCCCCCccCCHHHHHHHHHHccCCH
Confidence 99999974 57999999999999999999999999764221110 0111111 12234566788999999999999999
Q ss_pred CCCCC-----HHHHHHHHH
Q 014484 230 RERPN-----AKSLVISLM 243 (423)
Q Consensus 230 ~~Rps-----~~~vl~~l~ 243 (423)
.+|++ ++++++|-.
T Consensus 434 ~~Rl~~~~~ga~ei~~Hpf 452 (689)
T 3v5w_A 434 NRRLGCLGRGAQEVKESPF 452 (689)
T ss_dssp GGCTTCSSSTHHHHTTSGG
T ss_pred hHCCCCCCCCHHHHhcCcc
Confidence 99998 799988854
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-47 Score=381.40 Aligned_cols=236 Identities=15% Similarity=0.143 Sum_probs=199.7
Q ss_pred CCCCccceeeee--cceeeeeecCCCh-hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
|+||.||++.+. +..+|+|++.... ...+.+.+|+++|+.|+|||||+++++|.+++.+|+|||||+||+|.++|.+
T Consensus 168 G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~gg~L~~~i~~ 247 (573)
T 3uto_A 168 GAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVAD 247 (573)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCCCCBHHHHHTC
T ss_pred ccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecCCCcHHHHHHH
Confidence 899999999985 7788888776544 3467788999999999999999999999999999999999999999999964
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCC--CCeEEccccccccCCCCC---ccccCcccCCc
Q 014484 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKD--GNPRLSSFGLMKNSRDGK---SYSTNLAFTPP 153 (423)
Q Consensus 79 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~--~~~kl~Dfg~~~~~~~~~---~~~~t~~y~aP 153 (423)
..+.+++.++..++.||+.||.|||+++ |+||||||+|||++.+ +.+||+|||+++...... ...||+.||||
T Consensus 248 -~~~~l~e~~~~~~~~qi~~al~ylH~~~-iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~~~~~GT~~y~AP 325 (573)
T 3uto_A 248 -EHNKMSEDEAVEYMRQVCKGLCHMHENN-YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAP 325 (573)
T ss_dssp -TTSCEEHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEEEEECSSGGGCCH
T ss_pred -hCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCChhhccccCCCCCCEEEeeccceeEccCCCceeeeEECccccCH
Confidence 3457999999999999999999999999 9999999999999754 899999999999876553 35799999999
Q ss_pred cccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccc--cccCCCChhHHHHHHHHHHHhcccCcCC
Q 014484 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS--ALEGHFSNDEGTELVRLASRCLQSEARE 231 (423)
Q Consensus 154 E~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (423)
|++.+..|+.++|||||||++|+|++|..||.+...... +..+... .........+++++.+||.+||+.||.+
T Consensus 326 Ev~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~s~~~~dli~~~L~~dp~~ 401 (573)
T 3uto_A 326 EVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDET----LRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNT 401 (573)
T ss_dssp HHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH----HHHHHTTCCCCCSGGGTTSCHHHHHHHHTTSCSSGGG
T ss_pred HHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH----HHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhH
Confidence 999999999999999999999999999999976532221 1111111 1112222356788999999999999999
Q ss_pred CCCHHHHHHHHH
Q 014484 232 RPNAKSLVISLM 243 (423)
Q Consensus 232 Rps~~~vl~~l~ 243 (423)
|||++++++|-+
T Consensus 402 R~t~~e~l~Hpw 413 (573)
T 3uto_A 402 RMTIHQALEHPW 413 (573)
T ss_dssp SCCHHHHHHSTT
T ss_pred CcCHHHHhcCcC
Confidence 999999998843
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-44 Score=338.79 Aligned_cols=244 Identities=19% Similarity=0.265 Sum_probs=197.2
Q ss_pred CCCCccceeeeecceeeeeecCCCh---hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICWFHCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
|+||.||++.+.+..+++|++.... .....+.+|++++.+++||||+++++++...+..++||||+++++|.+++..
T Consensus 48 G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 127 (309)
T 3p86_A 48 GSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHK 127 (309)
T ss_dssp CSSEEEEEEEETTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECCTTCBHHHHHHS
T ss_pred CCCeEEEEEEECCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEecCCCCcHHHHHhh
Confidence 8999999999988889998876543 3355788999999999999999999999999999999999999999999964
Q ss_pred CC-CCCCCHHHHHHHHHHHHHHHHHHHcCCC-eeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccCC
Q 014484 79 WE-TQPMKWAMRLRVALYLAQALEYCSSKGR-ALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTP 152 (423)
Q Consensus 79 ~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~~-iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~a 152 (423)
.. ...+++..++.++.|++.||.|||++++ |+||||||+||+++.++.+||+|||+++..... ....||+.|+|
T Consensus 128 ~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~a 207 (309)
T 3p86_A 128 SGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMA 207 (309)
T ss_dssp TTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC-----------------CCTTSC
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCccccccccccccCCCCccccC
Confidence 22 1239999999999999999999999863 999999999999999999999999998754432 34568999999
Q ss_pred ccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCC
Q 014484 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (423)
Q Consensus 153 PE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (423)
||++.+..++.++|||||||++|+|++|..||........ .............+..+++++.++|.+||+.||.+|
T Consensus 208 PE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R 283 (309)
T 3p86_A 208 PEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQV----VAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKR 283 (309)
T ss_dssp HHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHH----HHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred hhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhC
Confidence 9999999999999999999999999999998876422211 111111223334566778899999999999999999
Q ss_pred CCHHHHHHHHHhhhhhc
Q 014484 233 PNAKSLVISLMSLQKEA 249 (423)
Q Consensus 233 ps~~~vl~~l~~~~~~~ 249 (423)
||++++++.|..+.+..
T Consensus 284 ps~~~ll~~L~~~~~~~ 300 (309)
T 3p86_A 284 PSFATIMDLLRPLIKSA 300 (309)
T ss_dssp CCHHHHHHHHHHHHC--
T ss_pred cCHHHHHHHHHHHHHhC
Confidence 99999999999887663
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-45 Score=347.71 Aligned_cols=241 Identities=21% Similarity=0.257 Sum_probs=193.0
Q ss_pred CCCCccceeeee-----cceeeeeecCCC--hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF-----HCHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~-----~~~~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||++.+. +..+++|++... ......+.+|+.++.+++||||+++++++..++..++||||++|++|.+
T Consensus 56 G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~ 135 (373)
T 2qol_A 56 GEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135 (373)
T ss_dssp CSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHH
T ss_pred CCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEEeCCCCCcHHH
Confidence 899999999874 556888887643 3446689999999999999999999999999999999999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCCc-------cccC
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS-------YSTN 147 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-------~~~t 147 (423)
++.. .+..+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++....... ..++
T Consensus 136 ~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~ 213 (373)
T 2qol_A 136 FLRK-HDAQFTVIQLVGMLRGIASGMKYLSDMG-YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIP 213 (373)
T ss_dssp HHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCC----------------------
T ss_pred HHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCcceEEEcCCCCEEECcCccccccccCCccceeccCCCcC
Confidence 9964 3457999999999999999999999999 99999999999999999999999999986553321 2246
Q ss_pred cccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcc
Q 014484 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (423)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (423)
+.|+|||++.+..++.++|||||||++|||++ |..||...... .....+........+..++.++.+++.+||+
T Consensus 214 ~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~-----~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~ 288 (373)
T 2qol_A 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-----DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQ 288 (373)
T ss_dssp CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH-----HHHHHHHTTEECCCCTTCBHHHHHHHHHHTC
T ss_pred CCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHcCCCCCCCccccHHHHHHHHHHhC
Confidence 78999999998999999999999999999998 88887654221 2222222333334455678899999999999
Q ss_pred cCcCCCCCHHHHHHHHHhhhhhc
Q 014484 227 SEARERPNAKSLVISLMSLQKEA 249 (423)
Q Consensus 227 ~dp~~Rps~~~vl~~l~~~~~~~ 249 (423)
.||.+|||+.++++.|+.+....
T Consensus 289 ~dp~~RPs~~~i~~~L~~~~~~~ 311 (373)
T 2qol_A 289 KDRNNRPKFEQIVSILDKLIRNP 311 (373)
T ss_dssp SSGGGSCCHHHHHHHHHHHHHCG
T ss_pred cChhhCcCHHHHHHHHHHHHhCc
Confidence 99999999999999999987654
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-44 Score=328.84 Aligned_cols=240 Identities=20% Similarity=0.290 Sum_probs=204.8
Q ss_pred CCCCccceeeee-cceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccCC
Q 014484 2 GGRCSKFSICWF-HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80 (423)
Q Consensus 2 G~~g~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~ 80 (423)
|+||.||.+.+. +..+++|++.......+.+.+|++++++++||||+++++++.+++..++||||+++++|.+++.. .
T Consensus 21 G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~ 99 (269)
T 4hcu_A 21 GQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRT-Q 99 (269)
T ss_dssp CSSCEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHT-T
T ss_pred CCccEEEEEEecCCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCCcHHHHHHh-c
Confidence 899999999984 66788888887776778899999999999999999999999999999999999999999999964 3
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-----CccccCcccCCccc
Q 014484 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYSTNLAFTPPEY 155 (423)
Q Consensus 81 ~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~~t~~y~aPE~ 155 (423)
...+++..++.++.|++.||.|||+++ ++||||||+||+++.++.++|+|||+++..... ....+|+.|+|||.
T Consensus 100 ~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~ 178 (269)
T 4hcu_A 100 RGLFAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEV 178 (269)
T ss_dssp TTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHH
T ss_pred CcccCHHHHHHHHHHHHHHHHHHHhCC-eecCCcchheEEEcCCCCEEeccccccccccccccccccCcccccccCCHHH
Confidence 456999999999999999999999999 999999999999999999999999999865432 33456778999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCC
Q 014484 156 MRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (423)
Q Consensus 156 ~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (423)
+.+..++.++|||||||++|+|++ |..||....... ....+........+...++++.+++.+||+.||.+|||
T Consensus 179 ~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps 253 (269)
T 4hcu_A 179 FSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE-----VVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPA 253 (269)
T ss_dssp HHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-----HHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred hcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHH-----HHHHHhcCccCCCCCcCCHHHHHHHHHHccCCcccCcC
Confidence 998899999999999999999999 887776542221 11122222333445556788999999999999999999
Q ss_pred HHHHHHHHHhhhhh
Q 014484 235 AKSLVISLMSLQKE 248 (423)
Q Consensus 235 ~~~vl~~l~~~~~~ 248 (423)
+.+++++|..+.+.
T Consensus 254 ~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 254 FSRLLRQLAEIAES 267 (269)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHc
Confidence 99999999988754
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-44 Score=338.20 Aligned_cols=240 Identities=19% Similarity=0.237 Sum_probs=200.9
Q ss_pred CCCCccceeeee-----cceeeeeecCC--ChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF-----HCHLKSSVLES--SDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~-----~~~~~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||.+.+. +..+++|++.. .......+.+|+.++..++||||+++++++.+++..++||||++|++|.+
T Consensus 60 G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~ 139 (325)
T 3kul_A 60 GDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT 139 (325)
T ss_dssp TTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEEEECCTTCBHHH
T ss_pred CCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEEeeCCCCCcHHH
Confidence 899999999984 33478887765 33456789999999999999999999999999999999999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC-------ccccC
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-------SYSTN 147 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-------~~~~t 147 (423)
++.. ....+++..++.++.|++.||.|||+++ |+||||||+|||++.++.++|+|||+++...... ...+|
T Consensus 140 ~l~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t 217 (325)
T 3kul_A 140 FLRT-HDGQFTIMQLVGMLRGVGAGMRYLSDLG-YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIP 217 (325)
T ss_dssp HHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCSSCEECC----CCEECC---CC
T ss_pred HHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCcceEEECCCCCEEECCCCcccccccCccceeeccCCCCc
Confidence 9964 3457999999999999999999999999 9999999999999999999999999998765432 12346
Q ss_pred cccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcc
Q 014484 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (423)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (423)
+.|+|||++.+..++.++|||||||++|+|++ |..||...... .....+........+..+++++.+++.+||+
T Consensus 218 ~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~ 292 (325)
T 3kul_A 218 IRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR-----DVISSVEEGYRLPAPMGCPHALHQLMLDCWH 292 (325)
T ss_dssp GGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH-----HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTC
T ss_pred ccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH-----HHHHHHHcCCCCCCCCCcCHHHHHHHHHHcc
Confidence 78999999998899999999999999999999 88887654222 2222222233344556678899999999999
Q ss_pred cCcCCCCCHHHHHHHHHhhhhh
Q 014484 227 SEARERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 227 ~dp~~Rps~~~vl~~l~~~~~~ 248 (423)
.||.+|||+.++++.|+.+.+.
T Consensus 293 ~dp~~Rps~~eil~~L~~l~~~ 314 (325)
T 3kul_A 293 KDRAQRPRFSQIVSVLDALIRS 314 (325)
T ss_dssp SSGGGSCCHHHHHHHHHHHHHS
T ss_pred CChhhCcCHHHHHHHHHHHHhC
Confidence 9999999999999999998765
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-44 Score=335.82 Aligned_cols=242 Identities=19% Similarity=0.259 Sum_probs=201.1
Q ss_pred CCCCccceeeee--cceeeeeecCC-ChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLES-SDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
|+||.||.+.+. +..+++|.+.. .......+.+|++++..++||||+++++++.+++..++||||++|++|.+++..
T Consensus 21 G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 100 (310)
T 3s95_A 21 GCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKS 100 (310)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHH
T ss_pred CCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecCCCcHHHHHHh
Confidence 899999999985 67778776644 345577899999999999999999999999999999999999999999999965
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC----------------
Q 014484 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK---------------- 142 (423)
Q Consensus 79 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---------------- 142 (423)
....+++..++.++.|++.||.|||+++ |+||||||+||+++.++.+||+|||+++......
T Consensus 101 -~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (310)
T 3s95_A 101 -MDSQYPWSQRVSFAKDIASGMAYLHSMN-IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKK 178 (310)
T ss_dssp -CCTTSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSTTSEEECTTSCEEECCCTTCEECC-------------------
T ss_pred -ccCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCCcCeEEECCCCCEEEeecccceeccccccccccccccccccccc
Confidence 3457999999999999999999999999 9999999999999999999999999997654321
Q ss_pred --ccccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHH
Q 014484 143 --SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRL 220 (423)
Q Consensus 143 --~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 220 (423)
...||+.|+|||++.+..++.++|||||||++|+|++|..|+........... ...........+..+++++.++
T Consensus 179 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~l 255 (310)
T 3s95_A 179 RYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFG---LNVRGFLDRYCPPNCPPSFFPI 255 (310)
T ss_dssp -CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSS---BCHHHHHHHTCCTTCCTTHHHH
T ss_pred ccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHh---hhhhccccccCCCCCCHHHHHH
Confidence 34689999999999999999999999999999999999988765321111100 0011111122344566789999
Q ss_pred HHHhcccCcCCCCCHHHHHHHHHhhhhh
Q 014484 221 ASRCLQSEARERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 221 i~~cl~~dp~~Rps~~~vl~~l~~~~~~ 248 (423)
+.+||+.||++|||+.++++.|+.+...
T Consensus 256 i~~~l~~dP~~Rps~~~l~~~L~~l~~~ 283 (310)
T 3s95_A 256 TVRCCDLDPEKRPSFVKLEHWLETLRMH 283 (310)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 9999999999999999999999998765
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-44 Score=340.39 Aligned_cols=241 Identities=18% Similarity=0.277 Sum_probs=202.0
Q ss_pred CCCCccceeeeec---------ceeeeeecCCCh--hhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCC
Q 014484 2 GGRCSKFSICWFH---------CHLKSSVLESSD--LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPN 69 (423)
Q Consensus 2 G~~g~v~~~~~~~---------~~~~~~~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 69 (423)
|+||.||.+.+.+ ..+++|++.... .....+.+|+.++..+ +||||++++++|...+..|+||||++|
T Consensus 92 G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv~e~~~~ 171 (370)
T 2psq_A 92 GCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 171 (370)
T ss_dssp CSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCEEEEECCTT
T ss_pred CCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEEEEEEcCCC
Confidence 8999999998742 347888776543 3456789999999999 899999999999999999999999999
Q ss_pred CCHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEcccccc
Q 014484 70 ETLAKHLFHWE--------------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLM 135 (423)
Q Consensus 70 ~~L~~~i~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~ 135 (423)
|+|.+++.... ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++
T Consensus 172 g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a 250 (370)
T 2psq_A 172 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK-CIHRDLAARNVLVTENNVMKIADFGLA 250 (370)
T ss_dssp CBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCCSSC
T ss_pred CCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-eeccccchhhEEECCCCCEEEccccCC
Confidence 99999997532 235899999999999999999999999 999999999999999999999999999
Q ss_pred ccCCCC------CccccCcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCC
Q 014484 136 KNSRDG------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGH 208 (423)
Q Consensus 136 ~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (423)
+..... ....+|+.|+|||++.+..++.++|||||||++|||++ |..||.... .......+.......
T Consensus 251 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~-----~~~~~~~~~~~~~~~ 325 (370)
T 2psq_A 251 RDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP-----VEELFKLLKEGHRMD 325 (370)
T ss_dssp EETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-----GGGHHHHHHTTCCCC
T ss_pred cccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHHhcCCCCC
Confidence 865432 22345788999999998899999999999999999999 888876532 122222333333445
Q ss_pred CChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhhh
Q 014484 209 FSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 209 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~~~~ 248 (423)
.+..++.++.+++.+||+.||.+|||+.+++++|+.+...
T Consensus 326 ~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~ 365 (370)
T 2psq_A 326 KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 365 (370)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 5667788999999999999999999999999999987654
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-44 Score=337.71 Aligned_cols=233 Identities=18% Similarity=0.241 Sum_probs=197.7
Q ss_pred CCCCccceeee--ecceeeeeecCCCh---hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICW--FHCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~--~~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
|+||.||.+.+ .+..+++|++.... .....+.+|+++++.++||||+++++++...+..++||||++|++|.+++
T Consensus 26 G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~~~L~~~l 105 (328)
T 3fe3_A 26 GNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYL 105 (328)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHH
T ss_pred CCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEECCCCCcHHHHH
Confidence 89999999997 37788888875533 34567889999999999999999999999999999999999999999998
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC---CccccCcccCCc
Q 014484 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTPP 153 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~~t~~y~aP 153 (423)
.. .+.+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++...... ....||+.|+||
T Consensus 106 ~~--~~~l~~~~~~~~~~qi~~al~~lH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aP 182 (328)
T 3fe3_A 106 VA--HGRMKEKEARSKFRQIVSAVQYCHQKR-IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAP 182 (328)
T ss_dssp HH--HCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCGGGTTSSSGGGCCH
T ss_pred HH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EeccCCCHHHEEEcCCCCEEEeeccCceecCCCCccccccCCcceeCc
Confidence 64 456999999999999999999999999 999999999999999999999999999765543 345789999999
Q ss_pred cccccCCCC-CCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCC
Q 014484 154 EYMRTGRVT-PESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (423)
Q Consensus 154 E~~~~~~~~-~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (423)
|.+.+..++ .++|||||||++|+|++|..||........... .... ....|..+++++.+++.+||+.||.+|
T Consensus 183 E~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~----i~~~--~~~~p~~~s~~~~~li~~~L~~dP~~R 256 (328)
T 3fe3_A 183 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRER----VLRG--KYRIPFYMSTDCENLLKRFLVLNPIKR 256 (328)
T ss_dssp HHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----HHHC--CCCCCTTSCHHHHHHHHHHCCSSTTTS
T ss_pred ccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHH----HHhC--CCCCCCCCCHHHHHHHHHHCCCChhHC
Confidence 999888764 799999999999999999999877533222211 1111 123455567889999999999999999
Q ss_pred CCHHHHHHHHH
Q 014484 233 PNAKSLVISLM 243 (423)
Q Consensus 233 ps~~~vl~~l~ 243 (423)
||++++++|.+
T Consensus 257 ~t~~eil~h~~ 267 (328)
T 3fe3_A 257 GTLEQIMKDRW 267 (328)
T ss_dssp CCHHHHTTCTT
T ss_pred cCHHHHhcCHh
Confidence 99999998744
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-44 Score=338.85 Aligned_cols=243 Identities=14% Similarity=0.199 Sum_probs=198.6
Q ss_pred CCCCccceeeeecceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCc----eeEEEecCCCCCHHhhhc
Q 014484 2 GGRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADE----RLLVAEFMPNETLAKHLF 77 (423)
Q Consensus 2 G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~----~~lv~e~~~~~~L~~~i~ 77 (423)
|+||.||++.+.+..+++|++.........+.+|+.++.+++||||+++++++..... .++||||+++|+|.+++.
T Consensus 35 G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~ 114 (322)
T 3soc_A 35 GRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLK 114 (322)
T ss_dssp STTCEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHH
T ss_pred cCceEEEEEEECCCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecCCCCCHHHHHH
Confidence 8999999999999999999988777666777889999999999999999999998654 699999999999999995
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHcC----------CCeeeccCCCCCeeecCCCCeEEccccccccCCCC------
Q 014484 78 HWETQPMKWAMRLRVALYLAQALEYCSSK----------GRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------ 141 (423)
Q Consensus 78 ~~~~~~~~~~~~~~i~~qi~~~l~~lH~~----------~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~------ 141 (423)
. ..+++..++.++.|++.||.|||+. + |+||||||+|||++.++.+||+|||+++.....
T Consensus 115 ~---~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~-ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~~~~~~~~~ 190 (322)
T 3soc_A 115 A---NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA-ISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDT 190 (322)
T ss_dssp H---CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECE-EECSCCSGGGEEECTTCCEEECCCTTCEEECTTSCCCCC
T ss_pred h---cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCC-EEeCCCChHhEEECCCCeEEEccCCcccccccccCcccc
Confidence 4 4599999999999999999999999 9 999999999999999999999999999755432
Q ss_pred CccccCcccCCccccccC-----CCCCCcceehhHHHHHHHhhCCCCCCchhhHH-----------hhhchhhh-hcccc
Q 014484 142 KSYSTNLAFTPPEYMRTG-----RVTPESVVYSFGTMLLDLLSGKHIPPSHALDL-----------IRSKNFLL-LMDSA 204 (423)
Q Consensus 142 ~~~~~t~~y~aPE~~~~~-----~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~-----------~~~~~~~~-~~~~~ 204 (423)
....||+.|+|||++.+. .++.++|||||||++|||+||..||....... ........ .....
T Consensus 191 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (322)
T 3soc_A 191 HGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKK 270 (322)
T ss_dssp TTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSC
T ss_pred ccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhccc
Confidence 235689999999998863 46678999999999999999998876431100 00001111 11111
Q ss_pred ccCCCC-----hhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhhh
Q 014484 205 LEGHFS-----NDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 205 ~~~~~~-----~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~~~~ 248 (423)
.....+ ...++++.++|.+||+.||++|||+.++++.|+.+.+.
T Consensus 271 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 271 KRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp CCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 112222 23567799999999999999999999999999998765
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-44 Score=333.38 Aligned_cols=235 Identities=17% Similarity=0.219 Sum_probs=196.6
Q ss_pred CCCCccceeeee--cceeeeeecCCCh-hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
|+||.||.+.+. +..+++|++.... ...+.+.+|+.+++.++||||+++++++..++..++||||++|++|.+++.+
T Consensus 31 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~ 110 (297)
T 3fxz_A 31 GASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE 110 (297)
T ss_dssp ETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHH
T ss_pred CCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCCCCCHHHHHhh
Confidence 899999999863 6778888775433 2356788999999999999999999999999999999999999999999964
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccCCcc
Q 014484 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPPE 154 (423)
Q Consensus 79 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~aPE 154 (423)
..+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++...... ....||+.|+|||
T Consensus 111 ---~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE 186 (297)
T 3fxz_A 111 ---TCMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPE 186 (297)
T ss_dssp ---SCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCGGGCCHH
T ss_pred ---cCCCHHHHHHHHHHHHHHHHHHHhCC-ceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccCCccCCcCccChh
Confidence 36999999999999999999999999 999999999999999999999999998765533 3356899999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCC
Q 014484 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (423)
Q Consensus 155 ~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (423)
.+.+..++.++|||||||++|+|++|..||............ ..........+..+++.+.++|.+||+.||.+|||
T Consensus 187 ~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps 263 (297)
T 3fxz_A 187 VVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI---ATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGS 263 (297)
T ss_dssp HHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH---HHHCSCCCSCGGGSCHHHHHHHHHHSCSSTTTSCC
T ss_pred hhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH---HhCCCCCCCCccccCHHHHHHHHHHccCChhHCcC
Confidence 999999999999999999999999999998654221111110 11111122335567888999999999999999999
Q ss_pred HHHHHHHHH
Q 014484 235 AKSLVISLM 243 (423)
Q Consensus 235 ~~~vl~~l~ 243 (423)
++++++|..
T Consensus 264 ~~ell~h~~ 272 (297)
T 3fxz_A 264 AKELLQHQF 272 (297)
T ss_dssp HHHHTTCGG
T ss_pred HHHHhhChh
Confidence 999998743
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-44 Score=349.96 Aligned_cols=240 Identities=21% Similarity=0.304 Sum_probs=204.6
Q ss_pred CCCCccceeeeecceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCC-ceeEEEecCCCCCHHhhhccCC
Q 014484 2 GGRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEAD-ERLLVAEFMPNETLAKHLFHWE 80 (423)
Q Consensus 2 G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~lv~e~~~~~~L~~~i~~~~ 80 (423)
|+||.||.+.+.+..+++|++.... ..+.|.+|++++++++||||+++++++.... ..++||||+++|+|.+++....
T Consensus 204 G~fg~V~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~ 282 (450)
T 1k9a_A 204 GEFGDVMLGDYRGNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRG 282 (450)
T ss_dssp CSSEEEEEEEETTEEEEEEEESSCT-TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCBHHHHHHHHC
T ss_pred cCCeeEEEEEecCCeEEEEEeCCch-HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCCcHHHHHHhcC
Confidence 8999999999999899999987654 5678999999999999999999999988765 6899999999999999997654
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-CccccCcccCCccccccC
Q 014484 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSYSTNLAFTPPEYMRTG 159 (423)
Q Consensus 81 ~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~~t~~y~aPE~~~~~ 159 (423)
...+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....+++.|+|||.+.+.
T Consensus 283 ~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~y~aPE~~~~~ 361 (450)
T 1k9a_A 283 RSVLGGDCLLKFSLDVCEAMEYLEGNN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREK 361 (450)
T ss_dssp TTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTSCEEECCCTTCEECC------CCCTTTSCHHHHHSS
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCHhhEEECCCCCEEEeeCCCcccccccccCCCCCcceeCHHHhcCC
Confidence 455899999999999999999999999 999999999999999999999999999865433 234568899999999999
Q ss_pred CCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHH
Q 014484 160 RVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238 (423)
Q Consensus 160 ~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v 238 (423)
.++.++|||||||++|||++ |..||.... .......+........+..+++++.++|.+||+.||.+|||+.++
T Consensus 362 ~~~~~sDvwslG~~l~el~t~g~~P~~~~~-----~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l 436 (450)
T 1k9a_A 362 KFSTKSDVWSFGILLWEIYSFGRVPYPRIP-----LKDVVPRVEKGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQL 436 (450)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTTCCSSTTSC-----TTTHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CCCcHHHHHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence 99999999999999999998 888876532 122222233333445666788999999999999999999999999
Q ss_pred HHHHHhhhhh
Q 014484 239 VISLMSLQKE 248 (423)
Q Consensus 239 l~~l~~~~~~ 248 (423)
+..|+.+...
T Consensus 437 ~~~L~~i~~~ 446 (450)
T 1k9a_A 437 REQLEHIRTH 446 (450)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 9999887654
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-43 Score=331.87 Aligned_cols=246 Identities=23% Similarity=0.381 Sum_probs=205.3
Q ss_pred CCCCccceeeee-cceeeeeecCCCh-hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccC
Q 014484 2 GGRCSKFSICWF-HCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW 79 (423)
Q Consensus 2 G~~g~v~~~~~~-~~~~~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~ 79 (423)
|+||.||.+.+. +..+++|.+.... .....+.+|+.++..++||||+++++++..++..++||||+++++|.+++...
T Consensus 50 G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~ 129 (321)
T 2qkw_B 50 GVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGS 129 (321)
T ss_dssp CSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTTCBTGGGSSSS
T ss_pred CCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCCCcHHHHHhcc
Confidence 899999999875 6778888775543 34678899999999999999999999999999999999999999999999643
Q ss_pred C--CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC------CccccCcccC
Q 014484 80 E--TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------KSYSTNLAFT 151 (423)
Q Consensus 80 ~--~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~------~~~~~t~~y~ 151 (423)
. ...+++..++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++..... ....||+.|+
T Consensus 130 ~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~ 208 (321)
T 2qkw_B 130 DLPTMSMSWEQRLEICIGAARGLHYLHTRA-IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYI 208 (321)
T ss_dssp CCCSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCCBCCCEEETTTC
T ss_pred CCCccccCHHHHHHHHHHHHHHHHHhcCCC-eecCCCCHHHEEECCCCCEEEeecccccccccccccccccccCCCcccc
Confidence 2 235999999999999999999999999 999999999999999999999999998754322 2235789999
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhH-----------HhhhchhhhhccccccCCCChhHHHHHHHH
Q 014484 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALD-----------LIRSKNFLLLMDSALEGHFSNDEGTELVRL 220 (423)
Q Consensus 152 aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 220 (423)
|||.+.+..++.++|||||||++|+|++|..||...... ......+....++......+..++..+.++
T Consensus 209 aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 288 (321)
T 2qkw_B 209 DPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDT 288 (321)
T ss_dssp CHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHH
T ss_pred CHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhccccCHHHHHHHHHH
Confidence 999999889999999999999999999999888643211 011111222333444445667789999999
Q ss_pred HHHhcccCcCCCCCHHHHHHHHHhhhhh
Q 014484 221 ASRCLQSEARERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 221 i~~cl~~dp~~Rps~~~vl~~l~~~~~~ 248 (423)
+.+||+.||++|||+.+++++|+.+.+.
T Consensus 289 i~~~l~~dP~~Rps~~ell~~L~~~l~~ 316 (321)
T 2qkw_B 289 AVKCLALSSEDRPSMGDVLWKLEYALRL 316 (321)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred HHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence 9999999999999999999999987653
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-44 Score=326.90 Aligned_cols=240 Identities=18% Similarity=0.274 Sum_probs=202.1
Q ss_pred CCCCccceeeee-cceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccCC
Q 014484 2 GGRCSKFSICWF-HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80 (423)
Q Consensus 2 G~~g~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~ 80 (423)
|+||.||.+.+. +..+++|++.........+.+|++++..++||||+++++++..++..++||||+++++|.+++.. .
T Consensus 19 G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~ 97 (268)
T 3sxs_A 19 GQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRS-H 97 (268)
T ss_dssp ETTEEEEEEEETTTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHH-H
T ss_pred CCCceEEEEEecCceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCCCcHHHHHHH-c
Confidence 899999999876 44688888877776778899999999999999999999999999999999999999999999964 2
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC-----ccccCcccCCccc
Q 014484 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-----SYSTNLAFTPPEY 155 (423)
Q Consensus 81 ~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-----~~~~t~~y~aPE~ 155 (423)
+..+++..++.++.|++.||.|||+++ ++||||||+||+++.++.++|+|||++....... ...+|+.|+|||.
T Consensus 98 ~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~ 176 (268)
T 3sxs_A 98 GKGLEPSQLLEMCYDVCEGMAFLESHQ-FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEV 176 (268)
T ss_dssp GGGCCHHHHHHHHHHHHHHHHHHHHTT-EEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCSCCCCGGGCCHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCcCcceEEECCCCCEEEccCccceecchhhhhcccCCCcCcccCCHHH
Confidence 446999999999999999999999999 9999999999999999999999999998655432 2345678999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCC
Q 014484 156 MRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (423)
Q Consensus 156 ~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (423)
+.+..++.++||||||+++|+|++ |..||........ ............+...++++.+++.+||+.||.+|||
T Consensus 177 ~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps 251 (268)
T 3sxs_A 177 FHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEV-----VLKVSQGHRLYRPHLASDTIYQIMYSCWHELPEKRPT 251 (268)
T ss_dssp HHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHH-----HHHHHTTCCCCCCTTSCHHHHHHHHHTTCSSGGGSCC
T ss_pred HhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHH-----HHHHHcCCCCCCCCcChHHHHHHHHHHcCCChhhCcC
Confidence 998889999999999999999999 8888765422211 1111122222334456788999999999999999999
Q ss_pred HHHHHHHHHhhhhh
Q 014484 235 AKSLVISLMSLQKE 248 (423)
Q Consensus 235 ~~~vl~~l~~~~~~ 248 (423)
+.+++++|+.+.+.
T Consensus 252 ~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 252 FQQLLSSIEPLREK 265 (268)
T ss_dssp HHHHHHHHGGGCC-
T ss_pred HHHHHHHHHHhhhc
Confidence 99999999988754
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-44 Score=354.00 Aligned_cols=241 Identities=19% Similarity=0.296 Sum_probs=208.4
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW 79 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~ 79 (423)
|+||.||++.+. +..+++|.+.......+.|.+|+.++++++||||++++++|...+..++||||+++|+|.+++...
T Consensus 231 G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~ 310 (495)
T 1opk_A 231 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC 310 (495)
T ss_dssp GTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHS
T ss_pred CCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCCCCHHHHHHhc
Confidence 899999999986 678999998877767888999999999999999999999999999999999999999999999765
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-----CccccCcccCCcc
Q 014484 80 ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYSTNLAFTPPE 154 (423)
Q Consensus 80 ~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~~t~~y~aPE 154 (423)
....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....+++.|+|||
T Consensus 311 ~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE 389 (495)
T 1opk_A 311 NRQEVSAVVLLYMATQISSAMEYLEKKN-FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 389 (495)
T ss_dssp CTTTSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECCTTCCCCGGGCCHH
T ss_pred CcCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChhhEEECCCCcEEEeecccceeccCCceeecCCCcCCcceeCHh
Confidence 5667999999999999999999999999 999999999999999999999999999876432 2234567899999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCC
Q 014484 155 YMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERP 233 (423)
Q Consensus 155 ~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 233 (423)
++.+..++.++|||||||++|||++ |..||.... ...+...+........+..+++++.+||.+||+.||.+||
T Consensus 390 ~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 464 (495)
T 1opk_A 390 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 464 (495)
T ss_dssp HHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC-----GGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred HHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCcChhHCc
Confidence 9998889999999999999999999 887776532 2222333333444455667788999999999999999999
Q ss_pred CHHHHHHHHHhhhhh
Q 014484 234 NAKSLVISLMSLQKE 248 (423)
Q Consensus 234 s~~~vl~~l~~~~~~ 248 (423)
|+.++++.|+.+...
T Consensus 465 s~~el~~~L~~~~~~ 479 (495)
T 1opk_A 465 SFAEIHQAFETMFQE 479 (495)
T ss_dssp CHHHHHHHHHTSCSS
T ss_pred CHHHHHHHHHHHHhc
Confidence 999999999876543
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-44 Score=334.44 Aligned_cols=235 Identities=15% Similarity=0.184 Sum_probs=199.5
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW 79 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~ 79 (423)
|+||.||.+.+. +..+++|++.........+.+|+.++..++||||+++++++.+.+..++||||++|++|.+++..
T Consensus 16 G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~- 94 (321)
T 1tki_A 16 GEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINT- 94 (321)
T ss_dssp CSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCBHHHHHTS-
T ss_pred CCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCCCCCHHHHHHh-
Confidence 899999999885 67788888877766777889999999999999999999999999999999999999999999954
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecC--CCCeEEccccccccCCCCC---ccccCcccCCcc
Q 014484 80 ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK--DGNPRLSSFGLMKNSRDGK---SYSTNLAFTPPE 154 (423)
Q Consensus 80 ~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~--~~~~kl~Dfg~~~~~~~~~---~~~~t~~y~aPE 154 (423)
.+..+++..++.++.|++.||.|||+++ |+||||||+|||++. ++.+||+|||+++...... ...||+.|+|||
T Consensus 95 ~~~~~~~~~~~~i~~qi~~al~~lH~~g-ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE 173 (321)
T 1tki_A 95 SAFELNEREIVSYVHQVCEALQFLHSHN-IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPE 173 (321)
T ss_dssp SSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEEEEESCGGGSCHH
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHCC-CCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCccccccCChhhcCcH
Confidence 3457999999999999999999999999 999999999999987 7899999999998765543 346899999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCC----hhHHHHHHHHHHHhcccCcC
Q 014484 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFS----NDEGTELVRLASRCLQSEAR 230 (423)
Q Consensus 155 ~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dp~ 230 (423)
++.+..++.++|||||||++|+|++|..||......... ........ .++ ..++.++.++|.+||..||.
T Consensus 174 ~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~----~~i~~~~~--~~~~~~~~~~s~~~~~li~~~L~~dp~ 247 (321)
T 1tki_A 174 VHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQII----ENIMNAEY--TFDEEAFKEISIEAMDFVDRLLVKERK 247 (321)
T ss_dssp HHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH----HHHHHTCC--CCCHHHHTTSCHHHHHHHHTTSCSSGG
T ss_pred HhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHH----HHHHcCCC--CCChhhhccCCHHHHHHHHHHcCCChh
Confidence 999888999999999999999999999998765322111 11111111 111 24577899999999999999
Q ss_pred CCCCHHHHHHHHHh
Q 014484 231 ERPNAKSLVISLMS 244 (423)
Q Consensus 231 ~Rps~~~vl~~l~~ 244 (423)
+|||+.++++|.+-
T Consensus 248 ~Rpt~~e~l~hp~~ 261 (321)
T 1tki_A 248 SRMTASEALQHPWL 261 (321)
T ss_dssp GSCCHHHHHHSHHH
T ss_pred HCcCHHHHhcChhh
Confidence 99999999998654
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-44 Score=344.49 Aligned_cols=240 Identities=22% Similarity=0.291 Sum_probs=201.9
Q ss_pred CCCCccceeeee--cceeeeeecCCC--hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~ 77 (423)
|+||.||.+.+. +..+++|++... ......+.+|+++++.++||||+++++++..++..++||||++||+|.+++.
T Consensus 125 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~ 204 (377)
T 3cbl_A 125 GNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLR 204 (377)
T ss_dssp ETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHH
T ss_pred CCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCCCCCHHHHHH
Confidence 899999999985 777888887644 2334578899999999999999999999999999999999999999999996
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC------ccccCcccC
Q 014484 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK------SYSTNLAFT 151 (423)
Q Consensus 78 ~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~------~~~~t~~y~ 151 (423)
. .+..+++..++.++.|++.||.|||+++ ++||||||+|||++.++.+||+|||+++...... ...+++.|+
T Consensus 205 ~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~ 282 (377)
T 3cbl_A 205 T-EGARLRVKTLLQMVGDAAAGMEYLESKC-CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWT 282 (377)
T ss_dssp H-HGGGCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECCSSCCEEEGGGS
T ss_pred h-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-cCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeecCCCCCCCcCcC
Confidence 4 3446999999999999999999999999 9999999999999999999999999998654321 123467899
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcC
Q 014484 152 PPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (423)
Q Consensus 152 aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (423)
|||.+.+..++.++|||||||++|||++ |..||...... .....+........+..+++++.+++.+||+.||.
T Consensus 283 aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~ 357 (377)
T 3cbl_A 283 APEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ-----QTREFVEKGGRLPCPELCPDAVFRLMEQCWAYEPG 357 (377)
T ss_dssp CHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH-----HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGG
T ss_pred CHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCch
Confidence 9999998889999999999999999998 88777654221 22222223333445666788999999999999999
Q ss_pred CCCCHHHHHHHHHhhhhh
Q 014484 231 ERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 231 ~Rps~~~vl~~l~~~~~~ 248 (423)
+|||++++++.|+.+.+.
T Consensus 358 ~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 358 QRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp GSCCHHHHHHHHHHHHHH
T ss_pred hCcCHHHHHHHHHHHHhh
Confidence 999999999999988654
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-43 Score=326.50 Aligned_cols=240 Identities=23% Similarity=0.329 Sum_probs=202.0
Q ss_pred CCCCccceeeee-cceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccCC
Q 014484 2 GGRCSKFSICWF-HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80 (423)
Q Consensus 2 G~~g~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~ 80 (423)
|+||.||.+.+. +..+++|++.........+.+|++++..++||||+++++++.+++..++||||+++++|.+++.. .
T Consensus 35 G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~ 113 (283)
T 3gen_A 35 GQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE-M 113 (283)
T ss_dssp --CEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTTCBHHHHHHC-G
T ss_pred CCCceEEEEEEcCCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCCCcHHHHHHH-h
Confidence 899999999886 45688888887766778899999999999999999999999999999999999999999999964 2
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-----CccccCcccCCccc
Q 014484 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYSTNLAFTPPEY 155 (423)
Q Consensus 81 ~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~~t~~y~aPE~ 155 (423)
...+++..++.++.|++.||.|||+++ |+||||||+||+++.++.++|+|||+++..... ....+|+.|+|||.
T Consensus 114 ~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~ 192 (283)
T 3gen_A 114 RHRFQTQQLLEMCKDVCEAMEYLESKQ-FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEV 192 (283)
T ss_dssp GGCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTTSTTSCGGGCCHHH
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCCccceEEEcCCCCEEEccccccccccccccccccCCccCcccCCHHH
Confidence 456999999999999999999999999 999999999999999999999999999865432 23446788999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCC
Q 014484 156 MRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (423)
Q Consensus 156 ~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (423)
+.+..++.++||||||+++|+|++ |..||....... ....+........+...++.+.+++.+||+.||.+|||
T Consensus 193 ~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps 267 (283)
T 3gen_A 193 LMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE-----TAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPT 267 (283)
T ss_dssp HHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH-----HHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCC
T ss_pred hccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhH-----HHHHHhcccCCCCCCcCCHHHHHHHHHHccCChhHCcC
Confidence 998899999999999999999998 888876542221 11122222333344556788999999999999999999
Q ss_pred HHHHHHHHHhhhhh
Q 014484 235 AKSLVISLMSLQKE 248 (423)
Q Consensus 235 ~~~vl~~l~~~~~~ 248 (423)
+.+++++|..+...
T Consensus 268 ~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 268 FKILLSNILDVMDE 281 (283)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhc
Confidence 99999999987654
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-44 Score=340.09 Aligned_cols=242 Identities=19% Similarity=0.278 Sum_probs=201.0
Q ss_pred CCCCccceeeee-------cceeeeeecCCC--hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICWF-------HCHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~~-------~~~~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 72 (423)
|+||.||.+.+. +..+++|++... ......+.+|+.++..++||||+++++++..+...++||||++||+|
T Consensus 82 G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L 161 (367)
T 3l9p_A 82 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDL 161 (367)
T ss_dssp CSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEH
T ss_pred CCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEEEEEeCCCCCH
Confidence 899999999964 346888887543 34556788999999999999999999999999999999999999999
Q ss_pred HhhhccCC-----CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCC---CeEEccccccccC------
Q 014484 73 AKHLFHWE-----TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG---NPRLSSFGLMKNS------ 138 (423)
Q Consensus 73 ~~~i~~~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~---~~kl~Dfg~~~~~------ 138 (423)
.+++.... ...+++..++.++.||+.||.|||+++ |+||||||+|||++.+| .+||+|||+++..
T Consensus 162 ~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~~~~~~~ 240 (367)
T 3l9p_A 162 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH-FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYY 240 (367)
T ss_dssp HHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHHHSSC
T ss_pred HHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChhhEEEecCCCCceEEECCCcccccccccccc
Confidence 99997432 245999999999999999999999999 99999999999998555 5999999998743
Q ss_pred CCCCccccCcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHH
Q 014484 139 RDGKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTEL 217 (423)
Q Consensus 139 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 217 (423)
.......+|+.|+|||++.+..++.++|||||||++|||++ |..||...... .....+........+..++.++
T Consensus 241 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~-----~~~~~i~~~~~~~~~~~~~~~l 315 (367)
T 3l9p_A 241 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ-----EVLEFVTSGGRMDPPKNCPGPV 315 (367)
T ss_dssp TTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-----HHHHHHHTTCCCCCCTTCCHHH
T ss_pred ccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHcCCCCCCCccCCHHH
Confidence 22334567899999999998899999999999999999998 88887654222 2222222233334556678889
Q ss_pred HHHHHHhcccCcCCCCCHHHHHHHHHhhhhhc
Q 014484 218 VRLASRCLQSEARERPNAKSLVISLMSLQKEA 249 (423)
Q Consensus 218 ~~li~~cl~~dp~~Rps~~~vl~~l~~~~~~~ 249 (423)
.+++.+||+.||.+|||+.+++++|+.+....
T Consensus 316 ~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~ 347 (367)
T 3l9p_A 316 YRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 347 (367)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred HHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence 99999999999999999999999999987663
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-43 Score=332.18 Aligned_cols=233 Identities=18% Similarity=0.232 Sum_probs=198.1
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+... +..+++|++.+.. .....+.+|+.++..++||||+++++++...+..|+||||++||+|..+
T Consensus 16 G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~ 95 (337)
T 1o6l_A 16 GTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFH 95 (337)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHH
T ss_pred CCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHH
Confidence 899999999874 6778888875532 2356788999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCC----CCccccCcccC
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNLAFT 151 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~~t~~y~ 151 (423)
+.+ .+.+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++.... .....||+.|+
T Consensus 96 l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~ 172 (337)
T 1o6l_A 96 LSR--ERVFTEERARFYGAEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYL 172 (337)
T ss_dssp HHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCBCCCEECGGGC
T ss_pred HHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCcCCHHHEEECCCCCEEEeeccchhhcccCCCcccccccChhhC
Confidence 864 457999999999999999999999999 99999999999999999999999999986432 23457899999
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCC
Q 014484 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARE 231 (423)
Q Consensus 152 aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (423)
|||++.+..++.++|||||||++|||++|..||.......... .+... ...++..+++++.++|.+||+.||.+
T Consensus 173 aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~----~i~~~--~~~~p~~~s~~~~~li~~lL~~dP~~ 246 (337)
T 1o6l_A 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFE----LILME--EIRFPRTLSPEAKSLLAGLLKKDPKQ 246 (337)
T ss_dssp CGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH----HHHHC--CCCCCTTSCHHHHHHHHHHTCSSTTT
T ss_pred ChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHH----HHHcC--CCCCCCCCCHHHHHHHHHHhhcCHHH
Confidence 9999999899999999999999999999999987643222111 11111 22355667889999999999999999
Q ss_pred CC-----CHHHHHHHHH
Q 014484 232 RP-----NAKSLVISLM 243 (423)
Q Consensus 232 Rp-----s~~~vl~~l~ 243 (423)
|| +++++++|..
T Consensus 247 R~g~~~~~~~ei~~h~~ 263 (337)
T 1o6l_A 247 RLGGGPSDAKEVMEHRF 263 (337)
T ss_dssp STTCSTTTHHHHHTSGG
T ss_pred hcCCCCCCHHHHHcCCC
Confidence 99 8999998854
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-43 Score=327.09 Aligned_cols=242 Identities=19% Similarity=0.301 Sum_probs=209.1
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW 79 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~ 79 (423)
|+||.||.+.+. +..+++|++.......+.+.+|+++++.++||||+++++++.+++..++||||++|++|.+++...
T Consensus 24 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~ 103 (288)
T 3kfa_A 24 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC 103 (288)
T ss_dssp GTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHC
T ss_pred CCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcCCCCcHHHHHHhc
Confidence 899999999986 677888988877777888999999999999999999999999999999999999999999999766
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC-----ccccCcccCCcc
Q 014484 80 ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-----SYSTNLAFTPPE 154 (423)
Q Consensus 80 ~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-----~~~~t~~y~aPE 154 (423)
....+++..++.++.|++.||.|||+++ |+||||||+||+++.++.++|+|||++....... ...+|+.|+|||
T Consensus 104 ~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE 182 (288)
T 3kfa_A 104 NRQEVSAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 182 (288)
T ss_dssp CTTTSCHHHHHHHHHHHHHHHHHHHHHT-CCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEETTEEECGGGCCHH
T ss_pred ccCCccHhHHHHHHHHHHHHHHHHHHCC-ccCCCCCcceEEEcCCCCEEEccCccceeccCCccccccCCccccCcCChh
Confidence 6677999999999999999999999999 9999999999999999999999999998665432 234577899999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCC
Q 014484 155 YMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERP 233 (423)
Q Consensus 155 ~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 233 (423)
.+.+..++.++||||||+++|+|++ |..||.... .......+........+..+++++.+++.+||+.||.+||
T Consensus 183 ~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp 257 (288)
T 3kfa_A 183 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 257 (288)
T ss_dssp HHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-----GGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred hhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHhccCCCCCCCCCCHHHHHHHHHHhCCChhhCc
Confidence 9998899999999999999999999 887776532 1222223333334445666788999999999999999999
Q ss_pred CHHHHHHHHHhhhhhc
Q 014484 234 NAKSLVISLMSLQKEA 249 (423)
Q Consensus 234 s~~~vl~~l~~~~~~~ 249 (423)
|+.++++.|..+....
T Consensus 258 s~~~~~~~l~~~~~~~ 273 (288)
T 3kfa_A 258 SFAEIHQAFETMFQES 273 (288)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhc
Confidence 9999999999887654
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-43 Score=334.88 Aligned_cols=241 Identities=20% Similarity=0.250 Sum_probs=201.0
Q ss_pred CCCCccceeeeec-------ceeeeeecCCCh--hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICWFH-------CHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~~~-------~~~~~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 72 (423)
|+||.||++.+.+ ..+++|++.... .....+.+|+.++..++||||+++++++..++..++||||+++++|
T Consensus 58 G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L 137 (343)
T 1luf_A 58 GAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDL 137 (343)
T ss_dssp CSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEECCTTCBH
T ss_pred cCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceEEEEecCCCCcH
Confidence 8999999999864 668888876532 3456789999999999999999999999999999999999999999
Q ss_pred HhhhccCC----------------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEc
Q 014484 73 AKHLFHWE----------------------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLS 130 (423)
Q Consensus 73 ~~~i~~~~----------------------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~ 130 (423)
.+++.... ...+++..++.++.||+.||.|||+++ |+||||||+||+++.++.+||+
T Consensus 138 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIl~~~~~~~kl~ 216 (343)
T 1luf_A 138 NEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK-FVHRDLATRNCLVGENMVVKIA 216 (343)
T ss_dssp HHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEEC
T ss_pred HHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCcceEEECCCCeEEEe
Confidence 99997532 257999999999999999999999999 9999999999999999999999
Q ss_pred cccccccCCC------CCccccCcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccc
Q 014484 131 SFGLMKNSRD------GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDS 203 (423)
Q Consensus 131 Dfg~~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~ 203 (423)
|||+++.... .....+|+.|+|||.+.+..++.++|||||||++|+|++ |..||....... ....+..
T Consensus 217 Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-----~~~~~~~ 291 (343)
T 1luf_A 217 DFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEE-----VIYYVRD 291 (343)
T ss_dssp CCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH-----HHHHHHT
T ss_pred ecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCChHH-----HHHHHhC
Confidence 9999875432 233457889999999998899999999999999999999 888876542221 1111212
Q ss_pred cccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhhh
Q 014484 204 ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 204 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~~~~ 248 (423)
......+..+++++.+++.+||+.||.+|||+.+++++|+.+...
T Consensus 292 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~ 336 (343)
T 1luf_A 292 GNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCER 336 (343)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC-
T ss_pred CCcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhh
Confidence 222345566788999999999999999999999999999988755
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-43 Score=337.54 Aligned_cols=242 Identities=19% Similarity=0.290 Sum_probs=203.4
Q ss_pred CCCCccceeeeec---------ceeeeeecCCC--hhhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCC
Q 014484 2 GGRCSKFSICWFH---------CHLKSSVLESS--DLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPN 69 (423)
Q Consensus 2 G~~g~v~~~~~~~---------~~~~~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 69 (423)
|+||.||++.+.+ ..+++|++... ......+.+|++++..+ +||||+++++++..++..++||||+++
T Consensus 80 G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv~e~~~~ 159 (382)
T 3tt0_A 80 GAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 159 (382)
T ss_dssp CSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTT
T ss_pred CCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCceEEEEEecCC
Confidence 8999999998753 35777777553 33457789999999999 999999999999999999999999999
Q ss_pred CCHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEcccccc
Q 014484 70 ETLAKHLFHWE--------------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLM 135 (423)
Q Consensus 70 ~~L~~~i~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~ 135 (423)
|+|.+++.... ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++
T Consensus 160 g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~DFG~a 238 (382)
T 3tt0_A 160 GNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK-CIHRDLAARNVLVTEDNVMKIADFGLA 238 (382)
T ss_dssp CBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECSCSCC
T ss_pred CcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCcceEEEcCCCcEEEcccCcc
Confidence 99999997532 245999999999999999999999999 999999999999999999999999999
Q ss_pred ccCCCC------CccccCcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCC
Q 014484 136 KNSRDG------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGH 208 (423)
Q Consensus 136 ~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (423)
+..... ....+|+.|+|||++.+..++.++|||||||++|+|++ |..||...... .....+.......
T Consensus 239 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~-----~~~~~~~~~~~~~ 313 (382)
T 3tt0_A 239 RDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE-----ELFKLLKEGHRMD 313 (382)
T ss_dssp CCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-----HHHHHHHTTCCCC
T ss_pred cccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHcCCCCC
Confidence 865432 22346788999999999899999999999999999999 88887654222 2222333333444
Q ss_pred CChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhhhc
Q 014484 209 FSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEA 249 (423)
Q Consensus 209 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~~~~~ 249 (423)
.+..+++++.+++.+||+.||++|||+++++++|+.+....
T Consensus 314 ~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 354 (382)
T 3tt0_A 314 KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALT 354 (382)
T ss_dssp CCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence 55667889999999999999999999999999999987653
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-43 Score=323.76 Aligned_cols=237 Identities=19% Similarity=0.273 Sum_probs=190.1
Q ss_pred CCCCccceeeeecceeeeeecCCChh-----hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWFHCHLKSSVLESSDL-----GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~~~~~~~~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
|+||.||.+.+.+..+++|++..... ..+.+.+|+++++.++||||+++++++..++..++||||++|++|.+++
T Consensus 18 G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~ 97 (271)
T 3dtc_A 18 GGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVL 97 (271)
T ss_dssp ETTEEEEEEEETTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEECCTTEEHHHHH
T ss_pred CCCeEEEEEEEcCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEEcCCCCCHHHHh
Confidence 89999999999888899988755432 2467889999999999999999999999999999999999999999998
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHcCC--CeeeccCCCCCeeecC--------CCCeEEccccccccCCCC--Ccc
Q 014484 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKG--RALYHDLNAYRILFDK--------DGNPRLSSFGLMKNSRDG--KSY 144 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~iiH~dlkp~Nill~~--------~~~~kl~Dfg~~~~~~~~--~~~ 144 (423)
. ++.+++..++.++.|++.||.|||+++ +|+||||||+||+++. ++.++|+|||+++..... ...
T Consensus 98 ~---~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~ 174 (271)
T 3dtc_A 98 S---GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSA 174 (271)
T ss_dssp T---SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC------------
T ss_pred h---cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCcccccccccccCC
Confidence 4 457999999999999999999999987 3779999999999986 678999999999765433 345
Q ss_pred ccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHh
Q 014484 145 STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRC 224 (423)
Q Consensus 145 ~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 224 (423)
.||+.|+|||.+.+..++.++||||||+++|+|++|..||........ .............+..+++++.+++.+|
T Consensus 175 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~li~~~ 250 (271)
T 3dtc_A 175 AGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAV----AYGVAMNKLALPIPSTCPEPFAKLMEDC 250 (271)
T ss_dssp -CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHH----HHHHHTSCCCCCCCTTCCHHHHHHHHHH
T ss_pred CCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH----HHhhhcCCCCCCCCcccCHHHHHHHHHH
Confidence 689999999999988899999999999999999999998876422211 1122222333445566788999999999
Q ss_pred cccCcCCCCCHHHHHHHHHhh
Q 014484 225 LQSEARERPNAKSLVISLMSL 245 (423)
Q Consensus 225 l~~dp~~Rps~~~vl~~l~~~ 245 (423)
|+.||.+|||+.+++++|+.+
T Consensus 251 l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 251 WNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp TCSSGGGSCCHHHHHHHHHC-
T ss_pred hcCCcccCcCHHHHHHHHhcC
Confidence 999999999999999999753
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-43 Score=336.25 Aligned_cols=233 Identities=15% Similarity=0.133 Sum_probs=195.8
Q ss_pred CCCCccceeeee--cceeeeeecCCChh-------hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDL-------GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~-------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 72 (423)
|+||.||.+... +..+++|++..... ..+.+.+|+.++..++||||+++++++.+.+..++||||++||+|
T Consensus 23 G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~e~~~gg~L 102 (361)
T 2yab_A 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGEL 102 (361)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCSCBH
T ss_pred CcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEEEEEcCCCCcH
Confidence 899999999885 67788887755432 246789999999999999999999999999999999999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCC----CeEEccccccccCCCC---Cccc
Q 014484 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG----NPRLSSFGLMKNSRDG---KSYS 145 (423)
Q Consensus 73 ~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~----~~kl~Dfg~~~~~~~~---~~~~ 145 (423)
.+++.. .+.+++..+..++.||+.||.|||++| |+||||||+|||++.++ .+||+|||+++..... ....
T Consensus 103 ~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~ 179 (361)
T 2yab_A 103 FDFLAQ--KESLSEEEATSFIKQILDGVNYLHTKK-IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF 179 (361)
T ss_dssp HHHHTT--CSCCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCTTCCCCCCC
T ss_pred HHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCCCCccccCC
Confidence 999953 557999999999999999999999999 99999999999998877 7999999999876543 3456
Q ss_pred cCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCC----hhHHHHHHHHH
Q 014484 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFS----NDEGTELVRLA 221 (423)
Q Consensus 146 ~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li 221 (423)
||+.|+|||++.+..++.++|||||||++|+|++|..||......... ..+.... ..++ ..+++++.+||
T Consensus 180 gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~----~~i~~~~--~~~~~~~~~~~s~~~~~li 253 (361)
T 2yab_A 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL----ANITAVS--YDFDEEFFSQTSELAKDFI 253 (361)
T ss_dssp SCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHH----HHHHTTC--CCCCHHHHTTSCHHHHHHH
T ss_pred CCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHH----HHHHhcC--CCCCchhccCCCHHHHHHH
Confidence 899999999999889999999999999999999999998765322111 1111111 1122 23567899999
Q ss_pred HHhcccCcCCCCCHHHHHHHHH
Q 014484 222 SRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 222 ~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
.+||..||.+|||+.++++|.+
T Consensus 254 ~~~L~~dP~~R~t~~e~l~hp~ 275 (361)
T 2yab_A 254 RKLLVKETRKRLTIQEALRHPW 275 (361)
T ss_dssp HHHSCSSTTTSCCHHHHHTSTT
T ss_pred HHHCCCChhHCcCHHHHhcCcC
Confidence 9999999999999999998743
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-43 Score=348.29 Aligned_cols=240 Identities=19% Similarity=0.301 Sum_probs=203.9
Q ss_pred CCCCccceeeee-cceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccCC
Q 014484 2 GGRCSKFSICWF-HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80 (423)
Q Consensus 2 G~~g~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~ 80 (423)
|+||.||.+.+. +..+++|.+.......+.|.+|+.+++.++||||+++++++. .+..++||||+++|+|.+++....
T Consensus 199 G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~ 277 (454)
T 1qcf_A 199 GQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLLDFLKSDE 277 (454)
T ss_dssp CSSEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCTTCBHHHHHHSHH
T ss_pred CCceEEEEEEECCccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecCCCcHHHHHHhcc
Confidence 899999999985 667889988776667889999999999999999999999987 567899999999999999996533
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-----CccccCcccCCccc
Q 014484 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYSTNLAFTPPEY 155 (423)
Q Consensus 81 ~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~~t~~y~aPE~ 155 (423)
+..+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....+|+.|+|||+
T Consensus 278 ~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~ 356 (454)
T 1qcf_A 278 GSKQPLPKLIDFSAQIAEGMAFIEQRN-YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEA 356 (454)
T ss_dssp HHTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCSSSSCGGGSCHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCCCcccccccCHHH
Confidence 446899999999999999999999999 999999999999999999999999999876532 23345778999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCC
Q 014484 156 MRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (423)
Q Consensus 156 ~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (423)
+.+..++.++|||||||++|||+| |..||...... .....+........+..+++++.+++.+||+.||.+|||
T Consensus 357 ~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~-----~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt 431 (454)
T 1qcf_A 357 INFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP-----EVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPT 431 (454)
T ss_dssp HHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-----HHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred hccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhHCcC
Confidence 998899999999999999999999 88888754222 122222223333455667889999999999999999999
Q ss_pred HHHHHHHHHhhhhh
Q 014484 235 AKSLVISLMSLQKE 248 (423)
Q Consensus 235 ~~~vl~~l~~~~~~ 248 (423)
+++|+..|+.+...
T Consensus 432 ~~~i~~~L~~~~~~ 445 (454)
T 1qcf_A 432 FEYIQSVLDDFYTA 445 (454)
T ss_dssp HHHHHHHHHTSSSS
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999887644
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-44 Score=335.70 Aligned_cols=240 Identities=17% Similarity=0.276 Sum_probs=195.0
Q ss_pred CCCCccceeeee--cce----eeeeecCCCh--hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHH
Q 014484 2 GGRCSKFSICWF--HCH----LKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLA 73 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~----~~~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 73 (423)
|+||.||++.+. +.. +++|.+.... .....+.+|+.++..++||||+++++++. ++..++||||+.+|+|.
T Consensus 24 G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~~~L~ 102 (325)
T 3kex_A 24 GVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLL 102 (325)
T ss_dssp CSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEEEEECCTTCBSH
T ss_pred cCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEEEEEeCCCCCHH
Confidence 899999999875 222 5555543322 23456788999999999999999999986 45689999999999999
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC------CccccC
Q 014484 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------KSYSTN 147 (423)
Q Consensus 74 ~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~------~~~~~t 147 (423)
+++.. ..+.+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....+|
T Consensus 103 ~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~ 180 (325)
T 3kex_A 103 DHVRQ-HRGALGPQLLLNWGVQIAKGMYYLEEHG-MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTP 180 (325)
T ss_dssp HHHHS-SGGGSCTTHHHHHHHHHHHHHHHHHHTT-CCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTTCCC-----CC
T ss_pred HHHHH-ccccCCHHHHHHHHHHHHHHHHHHHhCC-CCCCccchheEEECCCCeEEECCCCcccccCcccccccccCCCCc
Confidence 99964 3457999999999999999999999999 999999999999999999999999999876433 223467
Q ss_pred cccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcc
Q 014484 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (423)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (423)
..|+|||++.+..++.++|||||||++|+|++ |..||..... ......+........+..++.++.+++.+||+
T Consensus 181 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 255 (325)
T 3kex_A 181 IKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRL-----AEVPDLLEKGERLAQPQICTIDVYMVMVKCWM 255 (325)
T ss_dssp TTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCT-----THHHHHHHTTCBCCCCTTBCTTTTHHHHHHTC
T ss_pred ccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCH-----HHHHHHHHcCCCCCCCCcCcHHHHHHHHHHcC
Confidence 89999999998899999999999999999999 9888875421 22222222233334455567789999999999
Q ss_pred cCcCCCCCHHHHHHHHHhhhhhc
Q 014484 227 SEARERPNAKSLVISLMSLQKEA 249 (423)
Q Consensus 227 ~dp~~Rps~~~vl~~l~~~~~~~ 249 (423)
.||.+|||+.+++++|..+.+.+
T Consensus 256 ~dp~~Rps~~el~~~l~~~~~~~ 278 (325)
T 3kex_A 256 IDENIRPTFKELANEFTRMARDP 278 (325)
T ss_dssp SCTTTSCCHHHHHHHHHHHTTSH
T ss_pred CChhhCcCHHHHHHHHHHHHhcc
Confidence 99999999999999999987653
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-44 Score=330.00 Aligned_cols=240 Identities=22% Similarity=0.289 Sum_probs=197.1
Q ss_pred CCCCccceeeeec---------ceeeeeecCCCh-hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCC
Q 014484 2 GGRCSKFSICWFH---------CHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNET 71 (423)
Q Consensus 2 G~~g~v~~~~~~~---------~~~~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 71 (423)
|+||.||++.+.. ..+++|++.... ...+.+.+|+.+++.++||||+++++++..++..++||||++|++
T Consensus 19 G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 98 (289)
T 4fvq_A 19 GTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGS 98 (289)
T ss_dssp ETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCEEEEECCTTCB
T ss_pred CCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCEEEEECCCCCC
Confidence 8999999998753 357777775544 346778999999999999999999999999999999999999999
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCC--------eEEccccccccCCCCCc
Q 014484 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGN--------PRLSSFGLMKNSRDGKS 143 (423)
Q Consensus 72 L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~--------~kl~Dfg~~~~~~~~~~ 143 (423)
|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++. ++|+|||++........
T Consensus 99 L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~ 176 (289)
T 4fvq_A 99 LDTYLKK-NKNCINILWKLEVAKQLAAAMHFLEENT-LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDI 176 (289)
T ss_dssp HHHHHHH-TGGGCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTTSCHHH
T ss_pred HHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHhhCC-eECCCcCcceEEEecCCcccccccceeeeccCcccccccCccc
Confidence 9999965 3345999999999999999999999999 999999999999988886 99999999987766666
Q ss_pred cccCcccCCcccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHH
Q 014484 144 YSTNLAFTPPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLAS 222 (423)
Q Consensus 144 ~~~t~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 222 (423)
..+|+.|+|||.+.+ ..++.++|||||||++|+|++|..|+.......... .... .....+...++++.+++.
T Consensus 177 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~----~~~~--~~~~~~~~~~~~l~~li~ 250 (289)
T 4fvq_A 177 LQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKL----QFYE--DRHQLPAPKAAELANLIN 250 (289)
T ss_dssp HHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH----HHHH--TTCCCCCCSSCTTHHHHH
T ss_pred cCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHH----HHhh--ccCCCCCCCCHHHHHHHH
Confidence 678999999999987 668999999999999999999765554432111111 1111 122233444667999999
Q ss_pred HhcccCcCCCCCHHHHHHHHHhhhhhc
Q 014484 223 RCLQSEARERPNAKSLVISLMSLQKEA 249 (423)
Q Consensus 223 ~cl~~dp~~Rps~~~vl~~l~~~~~~~ 249 (423)
+||+.||.+|||+.+++++|..+....
T Consensus 251 ~~l~~dp~~Rps~~~ll~~l~~l~~p~ 277 (289)
T 4fvq_A 251 NCMDYEPDHRPSFRAIIRDLNSLFTPD 277 (289)
T ss_dssp HHSCSSGGGSCCHHHHHHHHHTCC---
T ss_pred HHcCCChhHCcCHHHHHHHHHHhcCCC
Confidence 999999999999999999999887653
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-43 Score=322.09 Aligned_cols=241 Identities=16% Similarity=0.211 Sum_probs=201.8
Q ss_pred CCCCccceeeeecceeeeeecCCCh---hhHHHHHHHHHHHhcCCCCCccceEeEEEeC--CceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWFHCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEA--DERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e~~~~~~L~~~i 76 (423)
|+||.||.+.+.+..+++|++.... .....+.+|+.++++++||||+++++++... +..++||||++|++|.+++
T Consensus 21 G~~g~V~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l 100 (271)
T 3kmu_A 21 NHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVL 100 (271)
T ss_dssp ETTEEEEEEEETTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCTTCBHHHHH
T ss_pred CCcceEEEEEECCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecccCCCcHHHHH
Confidence 8999999999988888988876543 3456789999999999999999999999887 6789999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCC-eeeccCCCCCeeecCCCCeEEccccccccCCCCCccccCcccCCccc
Q 014484 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGR-ALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEY 155 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~-iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~t~~y~aPE~ 155 (423)
....+..+++..++.++.|++.||.|||++++ ++||||||+||+++.++.++|+|||+..... .....+|+.|+|||.
T Consensus 101 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~-~~~~~~t~~y~aPE~ 179 (271)
T 3kmu_A 101 HEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ-SPGRMYAPAWVAPEA 179 (271)
T ss_dssp HSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS-CTTCBSCGGGSCHHH
T ss_pred hhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeeec-ccCccCCccccChhh
Confidence 76555569999999999999999999998753 9999999999999999999999988765433 334578999999999
Q ss_pred cccCCCCC---CcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCC
Q 014484 156 MRTGRVTP---ESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (423)
Q Consensus 156 ~~~~~~~~---~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (423)
+.+..++. ++|||||||++|+|++|..||........ .............+..+++++.+++.+||+.||.+|
T Consensus 180 ~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R 255 (271)
T 3kmu_A 180 LQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEI----GMKVALEGLRPTIPPGISPHVSKLMKICMNEDPAKR 255 (271)
T ss_dssp HHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHH----HHHHHHSCCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred hccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHH----HHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhC
Confidence 98766554 79999999999999999998876432221 122222333445566778899999999999999999
Q ss_pred CCHHHHHHHHHhhhh
Q 014484 233 PNAKSLVISLMSLQK 247 (423)
Q Consensus 233 ps~~~vl~~l~~~~~ 247 (423)
||++++++.|..+.+
T Consensus 256 ps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 256 PKFDMIVPILEKMQD 270 (271)
T ss_dssp CCHHHHHHHHHHHCC
T ss_pred cCHHHHHHHHHHhhc
Confidence 999999999988753
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-43 Score=340.57 Aligned_cols=237 Identities=14% Similarity=0.122 Sum_probs=194.4
Q ss_pred CCCCccceeeee--cceeeeeecCCCh---hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
|+||.||++... +..+++|++.... .....+.+|+.+++.++||||+++++++.+++..++||||+.||+|.+++
T Consensus 22 G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~i 101 (444)
T 3soa_A 22 GAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDI 101 (444)
T ss_dssp C--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEECCCBCCBHHHHH
T ss_pred CCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEEeCCCCCHHHHH
Confidence 899999999874 6777877775543 34567889999999999999999999999999999999999999999998
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeec---CCCCeEEccccccccCCCC----CccccCcc
Q 014484 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFD---KDGNPRLSSFGLMKNSRDG----KSYSTNLA 149 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~---~~~~~kl~Dfg~~~~~~~~----~~~~~t~~ 149 (423)
.. .+.+++..+..++.||+.||.|||+++ |+||||||+|||++ .++.+||+|||+++..... ....||+.
T Consensus 102 ~~--~~~~~e~~~~~i~~qil~aL~~lH~~g-ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~~~~~~~gt~~ 178 (444)
T 3soa_A 102 VA--REYYSEADASHCIQQILEAVLHCHQMG-VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPG 178 (444)
T ss_dssp HH--CSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCCBCCCSCSCGG
T ss_pred HH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCceeecccCCcc
Confidence 64 456999999999999999999999999 99999999999998 4678999999999876543 23578999
Q ss_pred cCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCc
Q 014484 150 FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEA 229 (423)
Q Consensus 150 y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 229 (423)
|+|||++.+..++.++|||||||++|+|++|.+||............... ...........+++++.++|.+||+.||
T Consensus 179 Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~s~~~~~li~~~L~~dP 256 (444)
T 3soa_A 179 YLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAG--AYDFPSPEWDTVTPEAKDLINKMLTINP 256 (444)
T ss_dssp GCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHT--CCCCCTTTTTTSCHHHHHHHHHHSCSST
T ss_pred cCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhC--CCCCCccccccCCHHHHHHHHHHcCCCh
Confidence 99999999889999999999999999999999998765322221111110 0111111223567889999999999999
Q ss_pred CCCCCHHHHHHHHH
Q 014484 230 RERPNAKSLVISLM 243 (423)
Q Consensus 230 ~~Rps~~~vl~~l~ 243 (423)
.+|||+.++++|.+
T Consensus 257 ~~Rpta~e~L~hp~ 270 (444)
T 3soa_A 257 SKRITAAEALKHPW 270 (444)
T ss_dssp TTSCCHHHHHHSCT
T ss_pred hHCCCHHHHhcCcc
Confidence 99999999999854
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-43 Score=336.96 Aligned_cols=242 Identities=20% Similarity=0.290 Sum_probs=199.4
Q ss_pred CCCCccceeeeec-------ceeeeeecCCCh--hhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCc-eeEEEecCCCC
Q 014484 2 GGRCSKFSICWFH-------CHLKSSVLESSD--LGETLNLEEAKAVGNL-RSERLANLIGCCYEADE-RLLVAEFMPNE 70 (423)
Q Consensus 2 G~~g~v~~~~~~~-------~~~~~~~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~-~~lv~e~~~~~ 70 (423)
|+||.||.+.+.+ ..+++|++.... .....+.+|++++..+ +||||+++++++...+. .++||||++||
T Consensus 33 G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~iv~e~~~~g 112 (359)
T 3vhe_A 33 GAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 112 (359)
T ss_dssp CSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEEECCTTE
T ss_pred CCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceEEEEEecCCC
Confidence 8999999998643 568888876533 3456789999999999 78999999999988655 89999999999
Q ss_pred CHHhhhccCCC----------------------------------------------------------------CCCCH
Q 014484 71 TLAKHLFHWET----------------------------------------------------------------QPMKW 86 (423)
Q Consensus 71 ~L~~~i~~~~~----------------------------------------------------------------~~~~~ 86 (423)
+|.+++..... ..+++
T Consensus 113 ~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 192 (359)
T 3vhe_A 113 NLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTL 192 (359)
T ss_dssp EHHHHHHTTTTSBCSCC------------------------------------------------------CTTTTCBCH
T ss_pred cHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcccccchhccccCH
Confidence 99999964321 12899
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC------CccccCcccCCccccccCC
Q 014484 87 AMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------KSYSTNLAFTPPEYMRTGR 160 (423)
Q Consensus 87 ~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~------~~~~~t~~y~aPE~~~~~~ 160 (423)
..++.++.||+.||.|||+++ |+||||||+|||++.++.++|+|||+++..... ....+|+.|+|||++.+..
T Consensus 193 ~~~~~~~~ql~~aL~~LH~~~-ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~ 271 (359)
T 3vhe_A 193 EHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV 271 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHCC-cccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCceeEChhhhcCCC
Confidence 999999999999999999999 999999999999999999999999999865432 2345688999999999889
Q ss_pred CCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHH
Q 014484 161 VTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239 (423)
Q Consensus 161 ~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl 239 (423)
++.++|||||||++|+|++ |..||...... ......+........+..+++++.+++.+||+.||.+|||+.+++
T Consensus 272 ~~~~~Di~slG~il~ellt~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell 347 (359)
T 3vhe_A 272 YTIQSDVWSFGVLLWEIFSLGASPYPGVKID----EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 347 (359)
T ss_dssp CCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS----HHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred CCchhhhhhHHHHHHHHHhcCCCCCCccchh----HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHH
Confidence 9999999999999999998 88888654211 112222222333445566778899999999999999999999999
Q ss_pred HHHHhhhhh
Q 014484 240 ISLMSLQKE 248 (423)
Q Consensus 240 ~~l~~~~~~ 248 (423)
++|..+...
T Consensus 348 ~~L~~~~~~ 356 (359)
T 3vhe_A 348 EHLGNLLQA 356 (359)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999988754
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-43 Score=325.62 Aligned_cols=243 Identities=15% Similarity=0.189 Sum_probs=196.5
Q ss_pred CCCCccceeeee--cceeeeeecCC----ChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLES----SDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.+. +..+++|++.. .......+.+|+.++.+++||||+++++++..++..++||||++|++|.++
T Consensus 22 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~ 101 (294)
T 4eqm_A 22 GGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEY 101 (294)
T ss_dssp ETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEECCCSCBHHHH
T ss_pred CCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEeCCCCCCHHHH
Confidence 899999999874 66788887633 233456789999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-----CccccCccc
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYSTNLAF 150 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~~t~~y 150 (423)
+.. .+.+++..++.++.|++.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....||+.|
T Consensus 102 l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y 178 (294)
T 4eqm_A 102 IES--HGPLSVDTAINFTNQILDGIKHAHDMR-IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQY 178 (294)
T ss_dssp HHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCSSSTTC-------------CCSS
T ss_pred HHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEEeCCCccccccccccccCccccCccc
Confidence 964 457999999999999999999999999 999999999999999999999999999865433 234689999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcC
Q 014484 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (423)
Q Consensus 151 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (423)
+|||.+.+..++.++|||||||++|+|++|..||................. +......+..+++.+.++|.+||+.||.
T Consensus 179 ~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dp~ 257 (294)
T 4eqm_A 179 FSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSV-PNVTTDVRKDIPQSLSNVILRATEKDKA 257 (294)
T ss_dssp CCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCC-CCHHHHSCTTSCHHHHHHHHHHSCSSGG
T ss_pred cCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccC-CCcchhcccCCCHHHHHHHHHHhcCCHh
Confidence 999999998999999999999999999999999876532222111111111 1111123345678899999999999999
Q ss_pred CCC-CHHHHHHHHHhhhhh
Q 014484 231 ERP-NAKSLVISLMSLQKE 248 (423)
Q Consensus 231 ~Rp-s~~~vl~~l~~~~~~ 248 (423)
+|| +++++.+.|..+...
T Consensus 258 ~R~~~~~~l~~~l~~~~~~ 276 (294)
T 4eqm_A 258 NRYKTIQEMKDDLSSVLHE 276 (294)
T ss_dssp GSCSSHHHHHHHHHTSSSS
T ss_pred HccccHHHHHHHHHHHHhh
Confidence 998 899999988876544
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-43 Score=336.60 Aligned_cols=241 Identities=15% Similarity=0.087 Sum_probs=190.1
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW 79 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~ 79 (423)
|+||.||.+... +..+++|++.........+.+|+.+++.++||||+++++++.+.+..++||||++||+|.+++..
T Consensus 31 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~- 109 (361)
T 3uc3_A 31 GNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICN- 109 (361)
T ss_dssp STTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHH-
T ss_pred CCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCCCCCHHHHHHh-
Confidence 899999999984 67789998877666667889999999999999999999999999999999999999999999864
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCC--eEEccccccccCCC---CCccccCcccCCcc
Q 014484 80 ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGN--PRLSSFGLMKNSRD---GKSYSTNLAFTPPE 154 (423)
Q Consensus 80 ~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~--~kl~Dfg~~~~~~~---~~~~~~t~~y~aPE 154 (423)
.+.+++..+..++.|++.||.|||++| |+||||||+|||++.++. +||+|||+++.... .....||+.|+|||
T Consensus 110 -~~~~~~~~~~~i~~ql~~~L~~LH~~~-ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE 187 (361)
T 3uc3_A 110 -AGRFSEDEARFFFQQLLSGVSYCHSMQ-ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPE 187 (361)
T ss_dssp -HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCSCCCCGGGEEECSSSSCCEEECCCCCC---------------CTTSCHH
T ss_pred -cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEcCCCCceEEEeecCccccccccCCCCCCcCCCCcCChh
Confidence 456999999999999999999999999 999999999999987765 99999999874332 24457899999999
Q ss_pred ccccCCCCCC-cceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCC
Q 014484 155 YMRTGRVTPE-SVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERP 233 (423)
Q Consensus 155 ~~~~~~~~~~-~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 233 (423)
++.+..++.+ +|||||||++|+|++|..||............................+++++.+||.+||+.||.+||
T Consensus 188 ~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rp 267 (361)
T 3uc3_A 188 VLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHLISRIFVADPATRI 267 (361)
T ss_dssp HHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCHHHHHHHHHHSCSCTTTSC
T ss_pred hhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCHHHHHHHHHHccCChhHCc
Confidence 9988877655 899999999999999999987542111111111222222222222224578899999999999999999
Q ss_pred CHHHHHHHHHhh
Q 014484 234 NAKSLVISLMSL 245 (423)
Q Consensus 234 s~~~vl~~l~~~ 245 (423)
|+.++++|.+-.
T Consensus 268 s~~ell~hp~f~ 279 (361)
T 3uc3_A 268 SIPEIKTHSWFL 279 (361)
T ss_dssp CHHHHHTSHHHH
T ss_pred CHHHHHhCcchh
Confidence 999999996653
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-43 Score=325.27 Aligned_cols=241 Identities=17% Similarity=0.265 Sum_probs=193.7
Q ss_pred CCCCccceeeeecceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccCCC
Q 014484 2 GGRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWET 81 (423)
Q Consensus 2 G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~ 81 (423)
|+||.||++.+.+..+++|.+.... ....+.+|++++++++||||+++++++. +..++||||++|++|.+++.....
T Consensus 19 G~~g~V~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~ 95 (307)
T 2eva_A 19 GAFGVVCKAKWRAKDVAIKQIESES-ERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEP 95 (307)
T ss_dssp CSSSEEEEEEETTEEEEEEECSSTT-HHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCTTCBHHHHHHCSSS
T ss_pred CCCceEEEEEECCeeEEEEEecChh-HHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCCCCCHHHHHhccCC
Confidence 8999999999988889999886543 4578899999999999999999999887 458999999999999999964322
Q ss_pred -CCCCHHHHHHHHHHHHHHHHHHHc---CCCeeeccCCCCCeeecCCCC-eEEccccccccCCCC-CccccCcccCCccc
Q 014484 82 -QPMKWAMRLRVALYLAQALEYCSS---KGRALYHDLNAYRILFDKDGN-PRLSSFGLMKNSRDG-KSYSTNLAFTPPEY 155 (423)
Q Consensus 82 -~~~~~~~~~~i~~qi~~~l~~lH~---~~~iiH~dlkp~Nill~~~~~-~kl~Dfg~~~~~~~~-~~~~~t~~y~aPE~ 155 (423)
..+++..++.++.|++.||.|||+ ++ |+||||||+||+++.++. +||+|||++...... ....||+.|+|||+
T Consensus 96 ~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~-ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~ 174 (307)
T 2eva_A 96 LPYYTAAHAMSWCLQCSQGVAYLHSMQPKA-LIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEV 174 (307)
T ss_dssp EECCCHHHHHHHHHHHHHHHHHHHTCSSSC-CCCCCCSGGGEEEETTTTEEEECCCCC------------CCTTSSCHHH
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHhCCCCC-eecCCCChhHEEEeCCCCEEEEcccccccccccccccCCCCCceEChhh
Confidence 247899999999999999999999 78 999999999999998887 799999998765543 34568999999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCCH
Q 014484 156 MRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNA 235 (423)
Q Consensus 156 ~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~ 235 (423)
+.+..++.++|||||||++|+|++|..||......... .............+..+++.+.+++.+||+.||.+|||+
T Consensus 175 ~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~ 251 (307)
T 2eva_A 175 FEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFR---IMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSM 251 (307)
T ss_dssp HTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHH---HHHHHHTTCCCCCBTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred hCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHH---HHHHHhcCCCCCcccccCHHHHHHHHHHhcCChhhCcCH
Confidence 99889999999999999999999999988643211110 111111122233445667889999999999999999999
Q ss_pred HHHHHHHHhhhhhc
Q 014484 236 KSLVISLMSLQKEA 249 (423)
Q Consensus 236 ~~vl~~l~~~~~~~ 249 (423)
++++++|..+....
T Consensus 252 ~ell~~L~~~~~~~ 265 (307)
T 2eva_A 252 EEIVKIMTHLMRYF 265 (307)
T ss_dssp HHHHHHHHHHGGGC
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999987654
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-43 Score=326.60 Aligned_cols=245 Identities=18% Similarity=0.286 Sum_probs=198.8
Q ss_pred CCCCccceeee------ecceeeeeecCCCh-hhHHHHHHHHHHHhcCCCCCccceEeEEEeC--CceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICW------FHCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEA--DERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~------~~~~~~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e~~~~~~L 72 (423)
|+||.||.+.+ .+..+++|++.... .....+.+|++++..++||||+++++++... ...++||||+++++|
T Consensus 21 G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L 100 (295)
T 3ugc_A 21 GNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 100 (295)
T ss_dssp CSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEEEECCTTCBH
T ss_pred cCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEEEEeCCCCCH
Confidence 89999999985 36778888876544 3456889999999999999999999999654 458999999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-------Cccc
Q 014484 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-------KSYS 145 (423)
Q Consensus 73 ~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-------~~~~ 145 (423)
.+++... ...+++..++.++.|++.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....
T Consensus 101 ~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~ 178 (295)
T 3ugc_A 101 RDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGE 178 (295)
T ss_dssp HHHHHHC-GGGCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCCCSCC-------------CTT
T ss_pred HHHHHhc-ccccCHHHHHHHHHHHHHHHHHHhcCC-cccCCCCHhhEEEcCCCeEEEccCcccccccCCcceeeeccCCC
Confidence 9999652 345999999999999999999999999 999999999999999999999999999865432 2234
Q ss_pred cCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhh-----------hchhhhhccccccCCCChhHH
Q 014484 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIR-----------SKNFLLLMDSALEGHFSNDEG 214 (423)
Q Consensus 146 ~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~ 214 (423)
++..|+|||.+.+..++.++|||||||++|+|++|..|+......... ................+..++
T Consensus 179 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (295)
T 3ugc_A 179 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCP 258 (295)
T ss_dssp CGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCC
T ss_pred CccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhccCcCCCCcCcC
Confidence 677899999999999999999999999999999999887654222111 011122222233344566778
Q ss_pred HHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhhh
Q 014484 215 TELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 215 ~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~~~~ 248 (423)
+++.+++.+||+.||.+|||+.++++.|+.+...
T Consensus 259 ~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~ 292 (295)
T 3ugc_A 259 DEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292 (295)
T ss_dssp HHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 8999999999999999999999999999988765
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-43 Score=332.58 Aligned_cols=239 Identities=16% Similarity=0.268 Sum_probs=195.6
Q ss_pred CCCCccceeeee--cc----eeeeeecCCC--hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHH
Q 014484 2 GGRCSKFSICWF--HC----HLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLA 73 (423)
Q Consensus 2 G~~g~v~~~~~~--~~----~~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 73 (423)
|+||.||++.+. +. .+++|.+... ......+.+|+.++.+++||||++++++|..+. .++||||+.+|+|.
T Consensus 26 G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~v~e~~~~g~L~ 104 (327)
T 3poz_A 26 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLL 104 (327)
T ss_dssp ETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEEEEECCTTCBHH
T ss_pred CCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEEEEEecCCCcHH
Confidence 899999999874 22 2455655332 234568899999999999999999999998765 78999999999999
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC------ccccC
Q 014484 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK------SYSTN 147 (423)
Q Consensus 74 ~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~------~~~~t 147 (423)
+++.. ....+++..++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++...... ...+|
T Consensus 105 ~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t 182 (327)
T 3poz_A 105 DYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDRR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182 (327)
T ss_dssp HHHHH-STTSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC-------CCC
T ss_pred HHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhCC-eeCCCCChheEEECCCCCEEEccCcceeEccCCcccccccCCCcc
Confidence 99965 3457999999999999999999999999 9999999999999999999999999997654332 23457
Q ss_pred cccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcc
Q 014484 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (423)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (423)
+.|+|||.+.+..++.++|||||||++|+|++ |..||.... .......+........+..++.++.+++.+||+
T Consensus 183 ~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 257 (327)
T 3poz_A 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP-----ASEISSILEKGERLPQPPICTIDVYMIMVKCWM 257 (327)
T ss_dssp GGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-----GGGHHHHHHTTCCCCCCTTBCHHHHHHHHHHTC
T ss_pred ccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCC-----HHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcC
Confidence 79999999999999999999999999999999 888876532 222333333333444566678899999999999
Q ss_pred cCcCCCCCHHHHHHHHHhhhhh
Q 014484 227 SEARERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 227 ~dp~~Rps~~~vl~~l~~~~~~ 248 (423)
.||.+|||+.+++++|..+.+.
T Consensus 258 ~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 258 IDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp SCGGGSCCHHHHHHHHHHHHTS
T ss_pred CChhhCCCHHHHHHHHHHHHhh
Confidence 9999999999999999988765
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-43 Score=331.51 Aligned_cols=253 Identities=14% Similarity=0.092 Sum_probs=202.3
Q ss_pred CCCCccceeee--ecceeeeeecCCChhhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~--~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
|+||.||.+.. .+..+++|++.... ....+.+|+++++.+ +||||+++++++..++..++||||+ +++|.+++..
T Consensus 20 G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~ 97 (330)
T 2izr_A 20 GNFGELRLGKNLYTNEYVAIKLEPMKS-RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-GPSLEDLFDL 97 (330)
T ss_dssp -CTTSEEEEEETTTTEEEEEEEEETTC-SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-CCBHHHHHHH
T ss_pred cCCceEEEEEECCCCcEEEEEEecccc-chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-CCCHHHHHHH
Confidence 89999999996 47778888875543 234688999999999 9999999999999999999999999 8999999965
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCC-----eEEccccccccCCCC-----------C
Q 014484 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGN-----PRLSSFGLMKNSRDG-----------K 142 (423)
Q Consensus 79 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~-----~kl~Dfg~~~~~~~~-----------~ 142 (423)
. ++.+++..++.++.|++.||.|||+++ |+||||||+|||++.++. ++|+|||+++..... .
T Consensus 98 ~-~~~~~~~~~~~i~~qi~~~l~~LH~~~-iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~ 175 (330)
T 2izr_A 98 C-DRTFSLKTVLMIAIQLISRMEYVHSKN-LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHK 175 (330)
T ss_dssp T-TTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTCCBCCCCCCC
T ss_pred c-CCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCCccccccccC
Confidence 3 467999999999999999999999999 999999999999998887 999999999865332 3
Q ss_pred ccccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhcccccc---CCCChhHHHHHHH
Q 014484 143 SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALE---GHFSNDEGTELVR 219 (423)
Q Consensus 143 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~ 219 (423)
...||+.|+|||++.+..++.++|||||||++|||++|..||......... ............ ......++ ++.+
T Consensus 176 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~p-~~~~ 253 (330)
T 2izr_A 176 SLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLK-ERYQKIGDTKRATPIEVLCENFP-EMAT 253 (330)
T ss_dssp CCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHH-HHHHHHHHHHHHSCHHHHTTTCH-HHHH
T ss_pred CcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHH-HHHHHHHhhhccCCHHHHhccCh-HHHH
Confidence 456899999999999989999999999999999999999998753111000 001111000000 00111234 8999
Q ss_pred HHHHhcccCcCCCCCHHHHHHHHHhhhhhccCChhhhhcCC
Q 014484 220 LASRCLQSEARERPNAKSLVISLMSLQKEAEVPSYVLLGIQ 260 (423)
Q Consensus 220 li~~cl~~dp~~Rps~~~vl~~l~~~~~~~~~~~~~~~~~~ 260 (423)
++.+||+.||.+||+++++++.|..+............+|.
T Consensus 254 li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~~~~~~~~dw~ 294 (330)
T 2izr_A 254 YLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYMFDYEYDWI 294 (330)
T ss_dssp HHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCCCSCCCTTT
T ss_pred HHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCCCCCCCccCC
Confidence 99999999999999999999999988776655544445554
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-43 Score=327.29 Aligned_cols=241 Identities=18% Similarity=0.266 Sum_probs=201.7
Q ss_pred CCCCccceeeee-------cceeeeeecCCC--hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICWF-------HCHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~~-------~~~~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 72 (423)
|+||.||.+.+. +..+++|++... ......+.+|+++++.++||||+++++++..++..++||||++|++|
T Consensus 34 G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L 113 (314)
T 2ivs_A 34 GEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL 113 (314)
T ss_dssp CSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBH
T ss_pred cCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceEEEEeecCCCCH
Confidence 899999999873 256788877543 33456789999999999999999999999999999999999999999
Q ss_pred HhhhccCCC----------------------CCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEc
Q 014484 73 AKHLFHWET----------------------QPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLS 130 (423)
Q Consensus 73 ~~~i~~~~~----------------------~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~ 130 (423)
.+++..... ..+++..++.++.||+.||.|||+++ |+||||||+||+++.++.++|+
T Consensus 114 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dikp~NIli~~~~~~kl~ 192 (314)
T 2ivs_A 114 RGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK-LVHRDLAARNILVAEGRKMKIS 192 (314)
T ss_dssp HHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTEEEEC
T ss_pred HHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC-CcccccchheEEEcCCCCEEEc
Confidence 999975322 34899999999999999999999999 9999999999999999999999
Q ss_pred cccccccCCCC------CccccCcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccc
Q 014484 131 SFGLMKNSRDG------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDS 203 (423)
Q Consensus 131 Dfg~~~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~ 203 (423)
|||+++..... ....+|+.|+|||.+.+..++.++|||||||++|+|++ |..||..... ......+..
T Consensus 193 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~-----~~~~~~~~~ 267 (314)
T 2ivs_A 193 DFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP-----ERLFNLLKT 267 (314)
T ss_dssp CCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG-----GGHHHHHHT
T ss_pred cccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHhhc
Confidence 99999866433 22346788999999998889999999999999999999 8888765422 222222323
Q ss_pred cccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhhh
Q 014484 204 ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 204 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~~~~ 248 (423)
......+..+++++.+++.+||+.||.+|||+.+++++|+.+...
T Consensus 268 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 268 GHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 333445566788999999999999999999999999999987643
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-42 Score=326.18 Aligned_cols=233 Identities=18% Similarity=0.209 Sum_probs=198.7
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+... +..+++|++.... .....+.+|+.++..++||||+++++++.+.+..|+||||++||+|.++
T Consensus 17 G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~~~gg~L~~~ 96 (318)
T 1fot_A 17 GSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSL 96 (318)
T ss_dssp CSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCCSCBHHHH
T ss_pred CCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeCCCCCCHHHH
Confidence 899999999874 6778888875532 2345678899999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-CccccCcccCCcc
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSYSTNLAFTPPE 154 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~~t~~y~aPE 154 (423)
+.. .+.+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++..... ....||+.|+|||
T Consensus 97 l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~~~~gt~~y~aPE 173 (318)
T 1fot_A 97 LRK--SQRFPNPVAKFYAAEVCLALEYLHSKD-IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPE 173 (318)
T ss_dssp HHH--TSSCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCCCCSCTTTCCHH
T ss_pred HHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChheEEEcCCCCEEEeecCcceecCCccccccCCccccCHh
Confidence 964 457999999999999999999999999 999999999999999999999999999876543 3567899999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCC-
Q 014484 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERP- 233 (423)
Q Consensus 155 ~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp- 233 (423)
++.+..++.++|||||||++|||++|..||........ ...+... ...++...++++.++|.+||+.||.+||
T Consensus 174 ~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~----~~~i~~~--~~~~p~~~~~~~~~li~~lL~~dp~~R~~ 247 (318)
T 1fot_A 174 VVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKT----YEKILNA--ELRFPPFFNEDVKDLLSRLITRDLSQRLG 247 (318)
T ss_dssp HHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH----HHHHHHC--CCCCCTTSCHHHHHHHHHHTCSCTTTCTT
T ss_pred HhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHH----HHHHHhC--CCCCCCCCCHHHHHHHHHHhccCHHHcCC
Confidence 99998999999999999999999999999876422211 1122221 1235566788999999999999999999
Q ss_pred ----CHHHHHHHHH
Q 014484 234 ----NAKSLVISLM 243 (423)
Q Consensus 234 ----s~~~vl~~l~ 243 (423)
+++++++|-.
T Consensus 248 ~~~~~~~~i~~hp~ 261 (318)
T 1fot_A 248 NLQNGTEDVKNHPW 261 (318)
T ss_dssp SSTTTTHHHHTSGG
T ss_pred CcCCCHHHHhcCcc
Confidence 8999998854
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-43 Score=323.11 Aligned_cols=242 Identities=19% Similarity=0.249 Sum_probs=202.1
Q ss_pred CCCCccceeeee----cceeeeeecCCC--hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF----HCHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~----~~~~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.+. +..+++|++... ......+.+|++++..++||||+++++++ ..+..++||||+++++|.++
T Consensus 21 G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~~L~~~ 99 (287)
T 1u59_A 21 GNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKF 99 (287)
T ss_dssp CTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEECCTTEEHHHH
T ss_pred cCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEEeCCCCCHHHH
Confidence 899999999863 566888887653 34567889999999999999999999999 55668999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-------CccccCc
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-------KSYSTNL 148 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-------~~~~~t~ 148 (423)
+.. ....+++..++.++.|++.||.|||+++ ++||||||+||+++.++.++|+|||+++..... ....+|+
T Consensus 100 l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~ 177 (287)
T 1u59_A 100 LVG-KREEIPVSNVAELLHQVSMGMKYLEEKN-FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPL 177 (287)
T ss_dssp HTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCG
T ss_pred HHh-CCccCCHHHHHHHHHHHHHHHHHHHHCC-EeeCCCchheEEEcCCCCEEECcccceeeeccCcceeeccccccccc
Confidence 964 3456999999999999999999999999 999999999999999999999999999866432 2234578
Q ss_pred ccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhccc
Q 014484 149 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQS 227 (423)
Q Consensus 149 ~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 227 (423)
.|+|||.+.+..++.++|||||||++|+|++ |..||...... .....+........+..+++++.++|.+||+.
T Consensus 178 ~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-----~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~ 252 (287)
T 1u59_A 178 KWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP-----EVMAFIEQGKRMECPPECPPELYALMSDCWIY 252 (287)
T ss_dssp GGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH-----HHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCS
T ss_pred cccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH-----HHHHHHhcCCcCCCCCCcCHHHHHHHHHHcCC
Confidence 8999999998889999999999999999998 99887654221 11222222233445667788999999999999
Q ss_pred CcCCCCCHHHHHHHHHhhhhhccC
Q 014484 228 EARERPNAKSLVISLMSLQKEAEV 251 (423)
Q Consensus 228 dp~~Rps~~~vl~~l~~~~~~~~~ 251 (423)
||.+|||+.+++++|+.+......
T Consensus 253 ~p~~Rps~~~l~~~l~~~~~~~~~ 276 (287)
T 1u59_A 253 KWEDRPDFLTVEQRMRACYYSLAS 276 (287)
T ss_dssp SGGGSCCHHHHHHHHHHHHHHHHT
T ss_pred ChhhCcCHHHHHHHHHHHHHhcCC
Confidence 999999999999999998766433
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-43 Score=329.65 Aligned_cols=243 Identities=27% Similarity=0.421 Sum_probs=201.5
Q ss_pred CCCCccceeeee-cceeeeeecCCChh--hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICWF-HCHLKSSVLESSDL--GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~~-~~~~~~~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
|+||.||.+.+. +..+++|++..... ....+.+|++++..++||||+++++++...+..++||||+++++|.+++..
T Consensus 41 G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 120 (326)
T 3uim_A 41 GGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRE 120 (326)
T ss_dssp CSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCEEEEECCTTCBHHHHHHC
T ss_pred CCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecCCceEEEEEeccCCCHHHHHHh
Confidence 899999999864 67788888765432 233688999999999999999999999999999999999999999999975
Q ss_pred CC--CCCCCHHHHHHHHHHHHHHHHHHHcC---CCeeeccCCCCCeeecCCCCeEEccccccccCCCC-----CccccCc
Q 014484 79 WE--TQPMKWAMRLRVALYLAQALEYCSSK---GRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYSTNL 148 (423)
Q Consensus 79 ~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~~t~ 148 (423)
.. ...+++..+..++.|++.||.|||++ + |+||||||+|||++.++.++|+|||+++..... ....||+
T Consensus 121 ~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~-ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~ 199 (326)
T 3uim_A 121 RPESQPPLDWPKRQRIALGSARGLAYLHDHCDPK-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTI 199 (326)
T ss_dssp CSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSC-EECCCCSGGGEEECTTCCEEECCCSSCEECCSSSSCEECCCCSCG
T ss_pred ccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC-eEeCCCchhhEEECCCCCEEeccCccccccCcccccccccccCCc
Confidence 32 33599999999999999999999999 9 999999999999999999999999999865432 2245899
Q ss_pred ccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHH-------------hhhchhhhhccccccCCCChhHHH
Q 014484 149 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDL-------------IRSKNFLLLMDSALEGHFSNDEGT 215 (423)
Q Consensus 149 ~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~ 215 (423)
.|+|||.+.+..++.++|||||||++|+|++|..||....... .................++...+.
T Consensus 200 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (326)
T 3uim_A 200 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVE 279 (326)
T ss_dssp GGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHH
T ss_pred CccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcChhhccccCHHHHH
Confidence 9999999988889999999999999999999999885321110 111122233333444556677889
Q ss_pred HHHHHHHHhcccCcCCCCCHHHHHHHHHhh
Q 014484 216 ELVRLASRCLQSEARERPNAKSLVISLMSL 245 (423)
Q Consensus 216 ~l~~li~~cl~~dp~~Rps~~~vl~~l~~~ 245 (423)
++.+++.+||+.||.+|||+.+++++|+..
T Consensus 280 ~l~~li~~cl~~dP~~Rps~~ell~~L~~~ 309 (326)
T 3uim_A 280 QLIQVALLCTQSSPMERPKMSEVVRMLEGD 309 (326)
T ss_dssp HHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred HHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence 999999999999999999999999999864
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-43 Score=325.67 Aligned_cols=238 Identities=17% Similarity=0.211 Sum_probs=188.5
Q ss_pred CCCCccceeeeecceeeeeecCCChhhHHHHHHHHHHHhc--CCCCCccceEeEEEeC----CceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGN--LRSERLANLIGCCYEA----DERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~----~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||++.+.+..+++|++.... ...+.+|.+++.. ++||||+++++++... ...++||||+++|+|.++
T Consensus 19 G~~g~V~~~~~~~~~vavK~~~~~~--~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~ 96 (301)
T 3q4u_A 19 GRYGEVWRGSWQGENVAVKIFSSRD--EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDY 96 (301)
T ss_dssp CSSEEEEEEEETTEEEEEEEECGGG--HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCCTTCBHHHH
T ss_pred CCCcEEEEEEECCEEEEEEEecccc--chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhccCCCHHHH
Confidence 8999999999989999999886554 3445556666655 7999999999997653 347899999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHH--------cCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC------
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCS--------SKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------ 141 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH--------~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~------ 141 (423)
++ ...+++..++.++.|++.||.||| +++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 97 l~---~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~-ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 172 (301)
T 3q4u_A 97 LQ---LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA-IAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDV 172 (301)
T ss_dssp HT---TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE-EECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEEEC
T ss_pred Hh---hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC-eecCCCChHhEEEcCCCCEEEeeCCCeeecccccccccc
Confidence 94 457999999999999999999999 889 999999999999999999999999998754432
Q ss_pred --CccccCcccCCccccccC------CCCCCcceehhHHHHHHHhhC----------CCCCCchhhHHhhhchhhhhc-c
Q 014484 142 --KSYSTNLAFTPPEYMRTG------RVTPESVVYSFGTMLLDLLSG----------KHIPPSHALDLIRSKNFLLLM-D 202 (423)
Q Consensus 142 --~~~~~t~~y~aPE~~~~~------~~~~~~Di~slG~~l~el~~g----------~~~~~~~~~~~~~~~~~~~~~-~ 202 (423)
....||+.|+|||++.+. .++.++|||||||++|||++| ..||................. .
T Consensus 173 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~ 252 (301)
T 3q4u_A 173 GNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCV 252 (301)
T ss_dssp CCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTT
T ss_pred cccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhc
Confidence 233789999999999876 455799999999999999999 666644211111111111111 1
Q ss_pred ccccCCC-----ChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhh
Q 014484 203 SALEGHF-----SNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 245 (423)
Q Consensus 203 ~~~~~~~-----~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~ 245 (423)
....... +...++++.+++.+||+.||.+|||+.++++.|+.+
T Consensus 253 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 253 DQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp SCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred cCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 1112222 234678999999999999999999999999999875
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-42 Score=328.59 Aligned_cols=241 Identities=19% Similarity=0.254 Sum_probs=195.9
Q ss_pred CCCCccceeeeec------ceeeeeecCCC--hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHH
Q 014484 2 GGRCSKFSICWFH------CHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLA 73 (423)
Q Consensus 2 G~~g~v~~~~~~~------~~~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 73 (423)
|+||.||++.+.. ..+++|++... ......+.+|+.++..++||||+++++++...+..++||||+++++|.
T Consensus 55 G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 134 (333)
T 1mqb_A 55 GEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALD 134 (333)
T ss_dssp CSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTEEHH
T ss_pred CCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEeCCCCCcHH
Confidence 8999999998753 23777776543 334567899999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC-------cccc
Q 014484 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-------SYST 146 (423)
Q Consensus 74 ~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-------~~~~ 146 (423)
+++.. ....+++..++.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++...... ...+
T Consensus 135 ~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~ 212 (333)
T 1mqb_A 135 KFLRE-KDGEFSVLQLVGMLRGIAAGMKYLANMN-YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKI 212 (333)
T ss_dssp HHHHH-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCCCC-----------------CC
T ss_pred HHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChheEEECCCCcEEECCCCcchhhccccccccccCCCCc
Confidence 99964 3457999999999999999999999999 9999999999999999999999999998654321 1234
Q ss_pred CcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhc
Q 014484 147 NLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCL 225 (423)
Q Consensus 147 t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 225 (423)
|+.|+|||.+.+..++.++|||||||++|+|++ |..||...... .....+........+..++.++.+++.+||
T Consensus 213 ~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 287 (333)
T 1mqb_A 213 PIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH-----EVMKAINDGFRLPTPMDCPSAIYQLMMQCW 287 (333)
T ss_dssp CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHHHHHTTCCCCCCTTCBHHHHHHHHHHT
T ss_pred cccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH-----HHHHHHHCCCcCCCcccCCHHHHHHHHHHc
Confidence 678999999998899999999999999999999 88887653221 112222222233345567889999999999
Q ss_pred ccCcCCCCCHHHHHHHHHhhhhhc
Q 014484 226 QSEARERPNAKSLVISLMSLQKEA 249 (423)
Q Consensus 226 ~~dp~~Rps~~~vl~~l~~~~~~~ 249 (423)
+.||.+|||+.+++++|+.+....
T Consensus 288 ~~~p~~Rps~~~l~~~L~~~~~~~ 311 (333)
T 1mqb_A 288 QQERARRPKFADIVSILDKLIRAP 311 (333)
T ss_dssp CSSTTTSCCHHHHHHHHHHHHHSG
T ss_pred CCChhhCcCHHHHHHHHHHHHhcc
Confidence 999999999999999999987653
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-43 Score=329.33 Aligned_cols=237 Identities=13% Similarity=0.116 Sum_probs=195.0
Q ss_pred CCCCccceeeee--cceeeeeecCCChh-------hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDL-------GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~-------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 72 (423)
|+||.||.+... +..+++|++..... ....+.+|+.++..++||||+++++++......++||||++|++|
T Consensus 22 G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L 101 (326)
T 2y0a_A 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL 101 (326)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBH
T ss_pred CCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEEcCCCCCH
Confidence 899999999885 67788887754322 356789999999999999999999999999999999999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCC----CeEEccccccccCCCC---Cccc
Q 014484 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG----NPRLSSFGLMKNSRDG---KSYS 145 (423)
Q Consensus 73 ~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~----~~kl~Dfg~~~~~~~~---~~~~ 145 (423)
.+++.. ...+++..++.++.||+.||.|||+++ |+||||||+||+++.++ .+||+|||+++..... ....
T Consensus 102 ~~~l~~--~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 178 (326)
T 2y0a_A 102 FDFLAE--KESLTEEEATEFLKQILNGVYYLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF 178 (326)
T ss_dssp HHHHTT--SSCCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCTTSCCCCCC
T ss_pred HHHHHh--cCCcCHHHHHHHHHHHHHHHHHHHHCC-eEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCCCCcccccc
Confidence 999953 467999999999999999999999999 99999999999998887 7999999999876533 3456
Q ss_pred cCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhc
Q 014484 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCL 225 (423)
Q Consensus 146 ~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 225 (423)
||+.|+|||++.+..++.++|||||||++|+|++|..||............. .............+++.+.++|.+||
T Consensus 179 gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~li~~~L 256 (326)
T 2y0a_A 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS--AVNYEFEDEYFSNTSALAKDFIRRLL 256 (326)
T ss_dssp SCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHH--HTCCCCCHHHHTTSCHHHHHHHHHHS
T ss_pred CCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHH--hcCCCcCccccccCCHHHHHHHHHHc
Confidence 8999999999998899999999999999999999999987643221111100 00001111111235678999999999
Q ss_pred ccCcCCCCCHHHHHHHHH
Q 014484 226 QSEARERPNAKSLVISLM 243 (423)
Q Consensus 226 ~~dp~~Rps~~~vl~~l~ 243 (423)
+.||.+|||+.++++|..
T Consensus 257 ~~dP~~Rpt~~e~l~hp~ 274 (326)
T 2y0a_A 257 VKDPKKRMTIQDSLQHPW 274 (326)
T ss_dssp CSSGGGSCCHHHHHHSTT
T ss_pred cCChhhCCCHHHHhcCCC
Confidence 999999999999998743
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-43 Score=345.97 Aligned_cols=240 Identities=23% Similarity=0.301 Sum_probs=199.7
Q ss_pred CCCCccceeeeec-ceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccCC
Q 014484 2 GGRCSKFSICWFH-CHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80 (423)
Q Consensus 2 G~~g~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~ 80 (423)
|+||.||.+.+.+ ..+++|++.......+.|.+|++++++++||||+++++++.. +..++||||+++|+|.+++....
T Consensus 195 G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL~~~l~~~~ 273 (452)
T 1fmk_A 195 GCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGET 273 (452)
T ss_dssp CSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTCBHHHHHSHHH
T ss_pred CCCeEEEEEEECCCceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcCCCHHHHHHhcC
Confidence 8999999999864 568888887766667889999999999999999999999876 66899999999999999996534
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-----CccccCcccCCccc
Q 014484 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYSTNLAFTPPEY 155 (423)
Q Consensus 81 ~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~~t~~y~aPE~ 155 (423)
+..+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....+++.|+|||.
T Consensus 274 ~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~y~aPE~ 352 (452)
T 1fmk_A 274 GKYLRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 352 (452)
T ss_dssp HTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCCTTC--------------CCGGGSCHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChhhEEECCCCCEEECCCccceecCCCceecccCCcccccccCHhH
Confidence 456999999999999999999999999 999999999999999999999999999865432 22345788999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCC
Q 014484 156 MRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (423)
Q Consensus 156 ~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (423)
+.+..++.++|||||||++|||++ |..||...... .....+........+..+++++.+++.+||+.||.+|||
T Consensus 353 ~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~-----~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt 427 (452)
T 1fmk_A 353 ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-----EVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPT 427 (452)
T ss_dssp HHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-----HHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred HhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCcC
Confidence 998899999999999999999999 88887654221 122222223334456677889999999999999999999
Q ss_pred HHHHHHHHHhhhhh
Q 014484 235 AKSLVISLMSLQKE 248 (423)
Q Consensus 235 ~~~vl~~l~~~~~~ 248 (423)
++++++.|+.+...
T Consensus 428 ~~~l~~~L~~~~~~ 441 (452)
T 1fmk_A 428 FEYLQAFLEDYFTS 441 (452)
T ss_dssp HHHHHHHHHTTTSC
T ss_pred HHHHHHHHHHHhcc
Confidence 99999999887644
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-43 Score=318.99 Aligned_cols=240 Identities=20% Similarity=0.298 Sum_probs=203.1
Q ss_pred CCCCccceeeee-cceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccCC
Q 014484 2 GGRCSKFSICWF-HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80 (423)
Q Consensus 2 G~~g~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~ 80 (423)
|+||.||.+.+. +..+++|.+.......+.+.+|+++++.++||||+++++++..++..++||||+++++|.+++.. .
T Consensus 19 G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~ 97 (267)
T 3t9t_A 19 GQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRT-Q 97 (267)
T ss_dssp ETTEEEEEEEETTTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHH-T
T ss_pred CCceeEEEEEecCCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCCcHHHHHhh-C
Confidence 899999999984 56788888877766678899999999999999999999999999999999999999999999965 3
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-----CccccCcccCCccc
Q 014484 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYSTNLAFTPPEY 155 (423)
Q Consensus 81 ~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~~t~~y~aPE~ 155 (423)
...+++..++.++.|++.||.|||+++ ++||||||+||+++.++.++|+|||++...... ....++..|+|||.
T Consensus 98 ~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~ 176 (267)
T 3t9t_A 98 RGLFAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEV 176 (267)
T ss_dssp TTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHH
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCchheEEECCCCCEEEcccccccccccccccccccccccccccChhh
Confidence 456999999999999999999999999 999999999999999999999999998865432 23456788999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCC
Q 014484 156 MRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (423)
Q Consensus 156 ~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (423)
+.+..++.++||||||+++|+|++ |..||........ ...+........+...++++.+++.+||+.||.+|||
T Consensus 177 ~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~-----~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps 251 (267)
T 3t9t_A 177 FSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV-----VEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPA 251 (267)
T ss_dssp HHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH-----HHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred hcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHH-----HHHHhcCCcCCCCccCcHHHHHHHHHHccCChhhCcC
Confidence 998889999999999999999999 7877765322211 1111122223344556788999999999999999999
Q ss_pred HHHHHHHHHhhhhh
Q 014484 235 AKSLVISLMSLQKE 248 (423)
Q Consensus 235 ~~~vl~~l~~~~~~ 248 (423)
+.+++++|..+.+.
T Consensus 252 ~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 252 FSRLLRQLAEIAES 265 (267)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999988653
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-42 Score=324.95 Aligned_cols=244 Identities=12% Similarity=0.126 Sum_probs=197.3
Q ss_pred CCCCccceeeee--cceeeeeecCCCh--hhHHHHHHHHHHHhcCCCCCccceEeEEEeCC--ceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEAD--ERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.+. +..+++|++.... .....+.+|+++++.++||||+++++++.... ..++||||++|++|.++
T Consensus 20 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 99 (319)
T 4euu_A 20 GATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTV 99 (319)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECCTTCBHHHH
T ss_pred CCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCCCCCCHHHH
Confidence 899999999986 7788888876543 23567889999999999999999999998766 67999999999999999
Q ss_pred hccCC-CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeee----cCCCCeEEccccccccCCCC---CccccC
Q 014484 76 LFHWE-TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILF----DKDGNPRLSSFGLMKNSRDG---KSYSTN 147 (423)
Q Consensus 76 i~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill----~~~~~~kl~Dfg~~~~~~~~---~~~~~t 147 (423)
+.... ...+++..++.++.||+.||.|||+++ |+||||||+||++ +.++.+||+|||+++..... ....||
T Consensus 100 l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt 178 (319)
T 4euu_A 100 LEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG-IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGT 178 (319)
T ss_dssp HHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTTCCBCCCCSC
T ss_pred HHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEEeccCCCCceEEEccCCCceecCCCCceeecccC
Confidence 97432 234999999999999999999999999 9999999999999 77778999999999876544 235689
Q ss_pred cccCCccccc--------cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccc----------------
Q 014484 148 LAFTPPEYMR--------TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS---------------- 203 (423)
Q Consensus 148 ~~y~aPE~~~--------~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~---------------- 203 (423)
+.|+|||++. +..++.++|||||||++|||++|..||...................
T Consensus 179 ~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 258 (319)
T 4euu_A 179 EEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGP 258 (319)
T ss_dssp GGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTTCC
T ss_pred CCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccCCc
Confidence 9999999886 4678999999999999999999998885321111111111111110
Q ss_pred -------cccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhh
Q 014484 204 -------ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQ 246 (423)
Q Consensus 204 -------~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~~ 246 (423)
.....++..++..+.+++.+||+.||++|||++++++|.....
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 259 IDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp EEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred cccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence 1112345678889999999999999999999999999987644
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-42 Score=325.61 Aligned_cols=236 Identities=19% Similarity=0.215 Sum_probs=197.6
Q ss_pred CCCCccceeeee--cceeeeeecCCCh-hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
|+||.||.+... +..+++|++.... ...+.+.+|+.++..++||||+++++++..++..++||||++|++|.+++.
T Consensus 56 G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~- 134 (321)
T 2c30_A 56 GSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVS- 134 (321)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHT-
T ss_pred CCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHH-
Confidence 899999999874 7888888875543 345678899999999999999999999999999999999999999999984
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccCCcc
Q 014484 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPPE 154 (423)
Q Consensus 79 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~aPE 154 (423)
...+++..+..++.|++.||.|||+++ |+||||||+||+++.++.+||+|||++...... ....||+.|+|||
T Consensus 135 --~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE 211 (321)
T 2c30_A 135 --QVRLNEEQIATVCEAVLQALAYLHAQG-VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPE 211 (321)
T ss_dssp --TCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHH
T ss_pred --hcCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCcEEEeeeeeeeecccCccccccccCCccccCHh
Confidence 356999999999999999999999999 999999999999999999999999998765432 3457899999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccc-cCCCChhHHHHHHHHHHHhcccCcCCCC
Q 014484 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSAL-EGHFSNDEGTELVRLASRCLQSEARERP 233 (423)
Q Consensus 155 ~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dp~~Rp 233 (423)
.+.+..++.++|||||||++|+|++|..||........ ......... ....+..+++++.+++.+||+.||++||
T Consensus 212 ~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp 287 (321)
T 2c30_A 212 VISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQA----MKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERA 287 (321)
T ss_dssp HHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH----HHHHHHSSCCCCTTGGGSCHHHHHHHHHHSCSSTTTSC
T ss_pred hhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHhcCCCCCcCccccCCHHHHHHHHHHccCChhhCc
Confidence 99988899999999999999999999998865422211 111111111 1112334678899999999999999999
Q ss_pred CHHHHHHHHHhh
Q 014484 234 NAKSLVISLMSL 245 (423)
Q Consensus 234 s~~~vl~~l~~~ 245 (423)
|++++++|..-.
T Consensus 288 s~~ell~hp~~~ 299 (321)
T 2c30_A 288 TAQELLDHPFLL 299 (321)
T ss_dssp CHHHHHTSGGGG
T ss_pred CHHHHhcChhhc
Confidence 999999885543
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-43 Score=324.82 Aligned_cols=234 Identities=17% Similarity=0.174 Sum_probs=188.2
Q ss_pred CCCCccceeeee--cceeeeeecCCChh---------------------------hHHHHHHHHHHHhcCCCCCccceEe
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDL---------------------------GETLNLEEAKAVGNLRSERLANLIG 52 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~---------------------------~~~~~~~E~~~l~~l~h~niv~~~~ 52 (423)
|+||.||.+... +..+++|++..... ..+.+.+|+++++.++||||+++++
T Consensus 24 G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 103 (298)
T 2zv2_A 24 GSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVE 103 (298)
T ss_dssp --CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 899999999874 67788888755432 1346889999999999999999999
Q ss_pred EEEe--CCceeEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEc
Q 014484 53 CCYE--ADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLS 130 (423)
Q Consensus 53 ~~~~--~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~ 130 (423)
++.. .+..++||||+++++|.+++. ...+++..++.++.||+.||.|||+++ |+||||||+||+++.++.+||+
T Consensus 104 ~~~~~~~~~~~lv~e~~~~~~l~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~kl~ 179 (298)
T 2zv2_A 104 VLDDPNEDHLYMVFELVNQGPVMEVPT---LKPLSEDQARFYFQDLIKGIEYLHYQK-IIHRDIKPSNLLVGEDGHIKIA 179 (298)
T ss_dssp EEECSSSSEEEEEEECCTTCBSCCSSC---SSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEEC
T ss_pred EEEcCCCCEEEEEEecCCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEECCCCCEEEe
Confidence 9987 567899999999999988763 457999999999999999999999999 9999999999999999999999
Q ss_pred cccccccCCCC----CccccCcccCCccccccCC---CCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccc
Q 014484 131 SFGLMKNSRDG----KSYSTNLAFTPPEYMRTGR---VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 203 (423)
Q Consensus 131 Dfg~~~~~~~~----~~~~~t~~y~aPE~~~~~~---~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~ 203 (423)
|||+++..... ....||+.|+|||.+.+.. ++.++|||||||++|+|++|..||.......... .....
T Consensus 180 Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~----~~~~~ 255 (298)
T 2zv2_A 180 DFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHS----KIKSQ 255 (298)
T ss_dssp CCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH----HHHHC
T ss_pred cCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHHHHH----HHhcc
Confidence 99999866543 3456899999999998655 4778999999999999999999987643221111 11111
Q ss_pred cccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 204 ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 204 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
.........+++++.++|.+||+.||.+|||+.++++|.+
T Consensus 256 ~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~ 295 (298)
T 2zv2_A 256 ALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPW 295 (298)
T ss_dssp CCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHH
T ss_pred cCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcCcc
Confidence 1111223356788999999999999999999999998753
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-43 Score=321.57 Aligned_cols=239 Identities=19% Similarity=0.244 Sum_probs=188.4
Q ss_pred CCCCccceeeee-----cceeeeeecCCC--hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF-----HCHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~-----~~~~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||.+.+. +..+++|.+... ....+.+.+|+.++..++||||+++++++. ++..++||||+++++|.+
T Consensus 26 G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~~~~~~L~~ 104 (281)
T 1mp8_A 26 GQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRS 104 (281)
T ss_dssp CSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEEEECCTTEEHHH
T ss_pred cCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEEEEecCCCCCHHH
Confidence 899999999874 234777776543 334667899999999999999999999985 556899999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC-----ccccCcc
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-----SYSTNLA 149 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-----~~~~t~~ 149 (423)
++.. ....+++..++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++...... ...+|+.
T Consensus 105 ~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~ 182 (281)
T 1mp8_A 105 FLQV-RKYSLDLASLILYAYQLSTALAYLESKR-FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 182 (281)
T ss_dssp HHHH-TTTTSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECC-------------------CCGG
T ss_pred HHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecccccHHHEEECCCCCEEECccccccccCcccccccccCCCccc
Confidence 9964 3456999999999999999999999999 9999999999999999999999999998665432 2345778
Q ss_pred cCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccC
Q 014484 150 FTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSE 228 (423)
Q Consensus 150 y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 228 (423)
|+|||.+.+..++.++|||||||++|+|++ |..||...... .....+........+..+++++.+++.+||+.|
T Consensus 183 y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~-----~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~ 257 (281)
T 1mp8_A 183 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-----DVIGRIENGERLPMPPNCPPTLYSLMTKCWAYD 257 (281)
T ss_dssp GCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG-----GHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred ccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH-----HHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCC
Confidence 999999998899999999999999999997 88777653211 111122222233455667889999999999999
Q ss_pred cCCCCCHHHHHHHHHhhhhh
Q 014484 229 ARERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 229 p~~Rps~~~vl~~l~~~~~~ 248 (423)
|.+|||+.+++++|..+.+.
T Consensus 258 p~~Rps~~~l~~~l~~~~~~ 277 (281)
T 1mp8_A 258 PSRRPRFTELKAQLSTILEE 277 (281)
T ss_dssp GGGSCCHHHHHHHHHHHHHH
T ss_pred hhhCcCHHHHHHHHHHHHHH
Confidence 99999999999999987654
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-42 Score=331.31 Aligned_cols=236 Identities=14% Similarity=0.169 Sum_probs=196.1
Q ss_pred CCCCccceeeee--cceeeeeecCCCh---hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
|+||.||++.+. +..+++|++.... .....+.+|+.+++.++||||+++++++.+++..++||||++||+|.+++
T Consensus 40 G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e~~~gg~L~~~l 119 (362)
T 2bdw_A 40 GAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI 119 (362)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHH
T ss_pred CCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCCHHHHH
Confidence 899999999875 6778888875543 34567889999999999999999999999999999999999999999998
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCC---CeEEccccccccCCCCC---ccccCccc
Q 014484 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG---NPRLSSFGLMKNSRDGK---SYSTNLAF 150 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~---~~kl~Dfg~~~~~~~~~---~~~~t~~y 150 (423)
.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++ .+||+|||+++...... ...||+.|
T Consensus 120 ~~--~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y 196 (362)
T 2bdw_A 120 VA--REFYSEADASHCIQQILESIAYCHSNG-IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGY 196 (362)
T ss_dssp TT--CSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCCSCCCSCSCTTT
T ss_pred HH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCchHHEEEecCCCCCCEEEeecCcceEecCCcccccCCCCccc
Confidence 53 457999999999999999999999999 99999999999997654 59999999998766443 35789999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccc--cCCCChhHHHHHHHHHHHhcccC
Q 014484 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSAL--EGHFSNDEGTELVRLASRCLQSE 228 (423)
Q Consensus 151 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~cl~~d 228 (423)
+|||++.+..++.++|||||||++|+|++|..||......... ..+..... .......+++++.++|.+||+.|
T Consensus 197 ~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 272 (362)
T 2bdw_A 197 LSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLY----AQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVN 272 (362)
T ss_dssp CCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHHTCCCCCTTGGGGSCHHHHHHHHHHSCSS
T ss_pred cCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHH----HHHHhCCCCCCcccccCCCHHHHHHHHHHcCCC
Confidence 9999999889999999999999999999999998764322111 11111111 11112346788999999999999
Q ss_pred cCCCCCHHHHHHHHHh
Q 014484 229 ARERPNAKSLVISLMS 244 (423)
Q Consensus 229 p~~Rps~~~vl~~l~~ 244 (423)
|.+|||+.++++|.+-
T Consensus 273 P~~R~t~~e~l~hp~~ 288 (362)
T 2bdw_A 273 PKKRITADQALKVPWI 288 (362)
T ss_dssp GGGSCCHHHHTTSHHH
T ss_pred hhhCcCHHHHhcCccc
Confidence 9999999999988654
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-43 Score=330.67 Aligned_cols=233 Identities=15% Similarity=0.176 Sum_probs=199.1
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.+. +..+++|++.... .....+.+|++++..++||||+++++++.+.+..|+||||++||+|.++
T Consensus 52 G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~gg~L~~~ 131 (350)
T 1rdq_E 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSH 131 (350)
T ss_dssp CSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHH
T ss_pred CcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHH
Confidence 899999999985 6778888875443 2346788999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-CccccCcccCCcc
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSYSTNLAFTPPE 154 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~~t~~y~aPE 154 (423)
+.+ .+.+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++..... ....||+.|+|||
T Consensus 132 l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~~~~~gt~~y~aPE 208 (350)
T 1rdq_E 132 LRR--IGRFSEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPE 208 (350)
T ss_dssp HHH--HCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCCCEECGGGCCHH
T ss_pred HHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCccceEEECCCCCEEEcccccceeccCCcccccCCccccCHH
Confidence 964 356999999999999999999999999 999999999999999999999999999876544 3467899999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCC
Q 014484 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (423)
Q Consensus 155 ~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (423)
++.+..++.++|||||||++|+|++|..||........ ...+... ...++..+++++.++|.+||+.||.+||+
T Consensus 209 ~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~----~~~i~~~--~~~~p~~~~~~~~~li~~lL~~dp~~R~~ 282 (350)
T 1rdq_E 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI----YEKIVSG--KVRFPSHFSSDLKDLLRNLLQVDLTKRFG 282 (350)
T ss_dssp HHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHC--CCCCCTTCCHHHHHHHHHHSCSCTTTCTT
T ss_pred HhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHH----HHHHHcC--CCCCCCCCCHHHHHHHHHHhhcCHHhccC
Confidence 99988999999999999999999999999876432211 1112111 22355667889999999999999999998
Q ss_pred -----HHHHHHHHH
Q 014484 235 -----AKSLVISLM 243 (423)
Q Consensus 235 -----~~~vl~~l~ 243 (423)
++++++|..
T Consensus 283 ~~~~~~~ei~~h~~ 296 (350)
T 1rdq_E 283 NLKNGVNDIKNHKW 296 (350)
T ss_dssp SSTTTTHHHHTSGG
T ss_pred CccCCHHHHHhCcC
Confidence 999998754
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-43 Score=332.08 Aligned_cols=243 Identities=21% Similarity=0.297 Sum_probs=197.8
Q ss_pred CCCCccceeeee-------cceeeeeecCCCh--hhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCCC
Q 014484 2 GGRCSKFSICWF-------HCHLKSSVLESSD--LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNET 71 (423)
Q Consensus 2 G~~g~v~~~~~~-------~~~~~~~~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 71 (423)
|+||.||.+.+. +..+++|++.... .....+.+|+.++.++ +||||+++++++..++..++||||+++|+
T Consensus 56 G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~g~ 135 (344)
T 1rjb_A 56 GAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGD 135 (344)
T ss_dssp CSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCB
T ss_pred CCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEEEEecCCCCc
Confidence 899999999873 3457778775432 3456789999999999 89999999999999999999999999999
Q ss_pred HHhhhccCCC---------------------CCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEc
Q 014484 72 LAKHLFHWET---------------------QPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLS 130 (423)
Q Consensus 72 L~~~i~~~~~---------------------~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~ 130 (423)
|.+++..... ..+++..++.++.||+.||.|||+++ |+||||||+||+++.++.++|+
T Consensus 136 L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIll~~~~~~kL~ 214 (344)
T 1rjb_A 136 LLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS-CVHRDLAARNVLVTHGKVVKIC 214 (344)
T ss_dssp HHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT-EEETTCSGGGEEEETTTEEEEC
T ss_pred HHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChhhEEEcCCCcEEeC
Confidence 9999965322 24899999999999999999999999 9999999999999999999999
Q ss_pred cccccccCCCCC------ccccCcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccc
Q 014484 131 SFGLMKNSRDGK------SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDS 203 (423)
Q Consensus 131 Dfg~~~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~ 203 (423)
|||++....... ...+|+.|+|||.+.+..++.++|||||||++|+|+| |..||...... ......+..
T Consensus 215 Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~----~~~~~~~~~ 290 (344)
T 1rjb_A 215 DFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVD----ANFYKLIQN 290 (344)
T ss_dssp CCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS----HHHHHHHHT
T ss_pred CCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcH----HHHHHHHhc
Confidence 999997654332 2345788999999998899999999999999999998 88887654211 112222223
Q ss_pred cccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhhhc
Q 014484 204 ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEA 249 (423)
Q Consensus 204 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~~~~~ 249 (423)
......+..+++++.+++.+||+.||.+|||+.+++++|..+....
T Consensus 291 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 336 (344)
T 1rjb_A 291 GFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADA 336 (344)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred CCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHH
Confidence 3334455567889999999999999999999999999999876653
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-43 Score=331.53 Aligned_cols=237 Identities=18% Similarity=0.181 Sum_probs=196.9
Q ss_pred CCCCccceeee--ecceeeeeecCCCh----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICW--FHCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~--~~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.. .+..+++|++.... .....+.+|++++..++||||+++++++..++..++||||+.| +|.++
T Consensus 65 G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~g-~l~~~ 143 (348)
T 1u5q_A 65 GSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLG-SASDL 143 (348)
T ss_dssp CSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSE-EHHHH
T ss_pred CCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEecCCC-CHHHH
Confidence 89999999986 36778888775432 2345788999999999999999999999999999999999975 88887
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCCccccCcccCCccc
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEY 155 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~t~~y~aPE~ 155 (423)
+.. ....+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++.........||+.|+|||+
T Consensus 144 l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~gt~~y~aPE~ 221 (348)
T 1u5q_A 144 LEV-HKKPLQEVEIAAVTHGALQGLAYLHSHN-MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVGTPYWMAPEV 221 (348)
T ss_dssp HHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCCSCGGGCCHHH
T ss_pred HHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEECCCCCEEEeeccCceecCCCCcccCCcceeCHhh
Confidence 753 3457999999999999999999999999 99999999999999999999999999988877777889999999998
Q ss_pred cc---cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCC
Q 014484 156 MR---TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (423)
Q Consensus 156 ~~---~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (423)
+. +..++.++|||||||++|||++|..||........ .............+..+++.+.++|.+||+.||.+|
T Consensus 222 ~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R 297 (348)
T 1u5q_A 222 ILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA----LYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDR 297 (348)
T ss_dssp HHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH----HHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred hccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH----HHHHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhC
Confidence 85 46689999999999999999999988865422111 111111122222344567889999999999999999
Q ss_pred CCHHHHHHHHHhh
Q 014484 233 PNAKSLVISLMSL 245 (423)
Q Consensus 233 ps~~~vl~~l~~~ 245 (423)
||++++++|..-.
T Consensus 298 ps~~~ll~h~~~~ 310 (348)
T 1u5q_A 298 PTSEVLLKHRFVL 310 (348)
T ss_dssp CCHHHHTTCHHHH
T ss_pred cCHHHHhhChhhh
Confidence 9999999886643
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-43 Score=328.90 Aligned_cols=242 Identities=17% Similarity=0.235 Sum_probs=189.3
Q ss_pred CCCCccceeeeecc-----eeeeeecCCC---hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCce------eEEEecC
Q 014484 2 GGRCSKFSICWFHC-----HLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEADER------LLVAEFM 67 (423)
Q Consensus 2 G~~g~v~~~~~~~~-----~~~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~------~lv~e~~ 67 (423)
|+||.||.+.+... .+++|++... ......+.+|+++++.++||||+++++++...... ++||||+
T Consensus 34 G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~ 113 (323)
T 3qup_A 34 GEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFM 113 (323)
T ss_dssp ETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-------CEEEEEECC
T ss_pred cCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCCCccEEEEEec
Confidence 89999999987532 5788877653 33467889999999999999999999999887665 9999999
Q ss_pred CCCCHHhhhccC----CCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC-
Q 014484 68 PNETLAKHLFHW----ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK- 142 (423)
Q Consensus 68 ~~~~L~~~i~~~----~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~- 142 (423)
.+++|.+++... ....+++..++.++.|++.||.|||+++ |+||||||+||+++.++.+||+|||+++......
T Consensus 114 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~-ivH~Dikp~NIli~~~~~~kl~Dfg~a~~~~~~~~ 192 (323)
T 3qup_A 114 KHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN-FIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDY 192 (323)
T ss_dssp TTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTSCEEECCCCC---------
T ss_pred cCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC-cccCCCCcceEEEcCCCCEEEeecccccccccccc
Confidence 999999998532 1225999999999999999999999999 9999999999999999999999999997654332
Q ss_pred -----ccccCcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHH
Q 014484 143 -----SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTE 216 (423)
Q Consensus 143 -----~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (423)
...+++.|+|||.+.+..++.++|||||||++|+|++ |..||..... ......+........+..++++
T Consensus 193 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 267 (323)
T 3qup_A 193 YRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIEN-----AEIYNYLIGGNRLKQPPECMEE 267 (323)
T ss_dssp --------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG-----GGHHHHHHTTCCCCCCTTCCHH
T ss_pred ccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccCh-----HHHHHHHhcCCCCCCCCccCHH
Confidence 2345778999999999899999999999999999999 7877765321 1122222222233445567789
Q ss_pred HHHHHHHhcccCcCCCCCHHHHHHHHHhhhhhc
Q 014484 217 LVRLASRCLQSEARERPNAKSLVISLMSLQKEA 249 (423)
Q Consensus 217 l~~li~~cl~~dp~~Rps~~~vl~~l~~~~~~~ 249 (423)
+.+++.+||+.||.+|||+.++++.|+.+...+
T Consensus 268 l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~ 300 (323)
T 3qup_A 268 VYDLMYQCWSADPKQRPSFTCLRMELENILGHL 300 (323)
T ss_dssp HHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999988774
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-43 Score=333.81 Aligned_cols=233 Identities=17% Similarity=0.222 Sum_probs=194.8
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||.+.+. +..+++|++.... .....+.+|+.++..+ +||||+++++++.+.+..|+||||++||+|..
T Consensus 34 G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~ 113 (353)
T 3txo_A 34 GSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMF 113 (353)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCCSCBHHH
T ss_pred CCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEeCCCCCcHHH
Confidence 899999999885 6778888876532 2355678999999988 79999999999999999999999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCC----CCccccCccc
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNLAF 150 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~~t~~y 150 (423)
++.+ .+.+++..+..++.||+.||.|||+++ |+||||||+|||++.+|++||+|||+++.... .....||+.|
T Consensus 114 ~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~gt~~y 190 (353)
T 3txo_A 114 HIQK--SRRFDEARARFYAAEIISALMFLHDKG-IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDY 190 (353)
T ss_dssp HHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCSCC---------CCGGG
T ss_pred HHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CcccCCCHHHEEECCCCCEEEccccceeecccCCccccccCCCcCe
Confidence 9964 456999999999999999999999999 99999999999999999999999999986432 2345789999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcC
Q 014484 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (423)
Q Consensus 151 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (423)
+|||++.+..++.++|||||||++|||++|..||......... ..+... ...++..+++++.++|.+||+.||.
T Consensus 191 ~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~----~~i~~~--~~~~p~~~~~~~~~li~~lL~~dP~ 264 (353)
T 3txo_A 191 IAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLF----EAILND--EVVYPTWLHEDATGILKSFMTKNPT 264 (353)
T ss_dssp CCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHHC--CCCCCTTSCHHHHHHHHHHTCSSGG
T ss_pred EChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHH----HHHHcC--CCCCCCCCCHHHHHHHHHHhhhCHH
Confidence 9999999888999999999999999999999998765332221 112111 2234556778899999999999999
Q ss_pred CCCCH------HHHHHHHH
Q 014484 231 ERPNA------KSLVISLM 243 (423)
Q Consensus 231 ~Rps~------~~vl~~l~ 243 (423)
+||++ +++++|..
T Consensus 265 ~R~~~~~~~~~~~il~hp~ 283 (353)
T 3txo_A 265 MRLGSLTQGGEHAILRHPF 283 (353)
T ss_dssp GSTTSGGGTCTHHHHTSGG
T ss_pred HccCCcccCCHHHHhhCCc
Confidence 99998 88888753
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-42 Score=325.76 Aligned_cols=242 Identities=20% Similarity=0.315 Sum_probs=201.7
Q ss_pred CCCCccceeeee-------cceeeeeecCCCh--hhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCCC
Q 014484 2 GGRCSKFSICWF-------HCHLKSSVLESSD--LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNET 71 (423)
Q Consensus 2 G~~g~v~~~~~~-------~~~~~~~~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 71 (423)
|+||.||.+.+. +..+++|++.... ...+.+.+|+.++.++ +||||+++++++..++..++||||+++|+
T Consensus 34 G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 113 (313)
T 1t46_A 34 GAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGD 113 (313)
T ss_dssp CSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEE
T ss_pred cCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEEEEecCCCCC
Confidence 899999999863 3567888776543 3457889999999999 99999999999999999999999999999
Q ss_pred HHhhhccCCC----------------CCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEcccccc
Q 014484 72 LAKHLFHWET----------------QPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLM 135 (423)
Q Consensus 72 L~~~i~~~~~----------------~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~ 135 (423)
|.+++..... ..+++..++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||++
T Consensus 114 L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 192 (313)
T 1t46_A 114 LLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN-CIHRDLAARNILLTHGRITKICDFGLA 192 (313)
T ss_dssp HHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEETTTEEEECCCGGG
T ss_pred HHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCccceEEEcCCCCEEEcccccc
Confidence 9999975332 25899999999999999999999999 999999999999999999999999999
Q ss_pred ccCCCCC------ccccCcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCC
Q 014484 136 KNSRDGK------SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGH 208 (423)
Q Consensus 136 ~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (423)
+...... ...+|+.|+|||.+.+..++.++|||||||++|+|++ |..||...... ..............
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~----~~~~~~~~~~~~~~ 268 (313)
T 1t46_A 193 RDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD----SKFYKMIKEGFRML 268 (313)
T ss_dssp SCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSS----HHHHHHHHHTCCCC
T ss_pred ccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccch----hHHHHHhccCCCCC
Confidence 8765432 2345778999999998899999999999999999999 88877654211 11222222233334
Q ss_pred CChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhhh
Q 014484 209 FSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 209 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~~~~ 248 (423)
.+..++.++.+++.+||+.||.+|||+.+++++|+.+...
T Consensus 269 ~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 308 (313)
T 1t46_A 269 SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 308 (313)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 4556778899999999999999999999999999987755
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-42 Score=320.47 Aligned_cols=242 Identities=18% Similarity=0.223 Sum_probs=199.2
Q ss_pred CCCCccceeeeec-----ceeeeeecCCCh--hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCce-eEEEecCCCCCHH
Q 014484 2 GGRCSKFSICWFH-----CHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADER-LLVAEFMPNETLA 73 (423)
Q Consensus 2 G~~g~v~~~~~~~-----~~~~~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-~lv~e~~~~~~L~ 73 (423)
|+||.||.+.+.. ..+++|.+.... ...+.+.+|+.+++.++||||+++++++...+.. ++||||+.+++|.
T Consensus 32 G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~ 111 (298)
T 3pls_A 32 GHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLL 111 (298)
T ss_dssp ETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECCCTTCBHH
T ss_pred CCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEecccCCCHH
Confidence 8999999998742 246777765433 3457889999999999999999999999877665 8999999999999
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCC--------CCccc
Q 014484 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD--------GKSYS 145 (423)
Q Consensus 74 ~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~--------~~~~~ 145 (423)
+++.. ....+++..++.++.|++.||.|||+++ ++||||||+||+++.++.++|+|||+++.... .....
T Consensus 112 ~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~ 189 (298)
T 3pls_A 112 QFIRS-PQRNPTVKDLISFGLQVARGMEYLAEQK-FVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHAR 189 (298)
T ss_dssp HHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGCSCCSSCTT
T ss_pred HHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCcceEEEcCCCcEEeCcCCCcccccCCcccccccCcCCC
Confidence 99964 4567899999999999999999999999 99999999999999999999999999975432 23345
Q ss_pred cCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhc
Q 014484 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCL 225 (423)
Q Consensus 146 ~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 225 (423)
+|+.|+|||.+.+..++.++|||||||++|+|++|..||.... .................+..+++++.+++.+||
T Consensus 190 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 265 (298)
T 3pls_A 190 LPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHI----DPFDLTHFLAQGRRLPQPEYCPDSLYQVMQQCW 265 (298)
T ss_dssp CGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS----CGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHT
T ss_pred CCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccC----CHHHHHHHhhcCCCCCCCccchHHHHHHHHHHc
Confidence 6889999999998899999999999999999999766654431 112222222223333445566788999999999
Q ss_pred ccCcCCCCCHHHHHHHHHhhhhhc
Q 014484 226 QSEARERPNAKSLVISLMSLQKEA 249 (423)
Q Consensus 226 ~~dp~~Rps~~~vl~~l~~~~~~~ 249 (423)
+.||.+|||+.++++.|+.+....
T Consensus 266 ~~~p~~Rps~~~ll~~l~~~~~~l 289 (298)
T 3pls_A 266 EADPAVRPTFRVLVGEVEQIVSAL 289 (298)
T ss_dssp CSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred cCChhhCcCHHHHHHHHHHHHHHH
Confidence 999999999999999999987764
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-42 Score=334.42 Aligned_cols=240 Identities=15% Similarity=0.115 Sum_probs=191.7
Q ss_pred CCCccceeeee--cceeeeeecCCCh---hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhc
Q 014484 3 GRCSKFSICWF--HCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (423)
Q Consensus 3 ~~g~v~~~~~~--~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~ 77 (423)
+||.||.+.+. +..+++|++.... .....+.+|+.+++.++||||+++++++..++..++||||+++++|.+++.
T Consensus 39 ~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~ 118 (389)
T 3gni_B 39 DLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLIC 118 (389)
T ss_dssp TTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHH
T ss_pred CceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEEEccCCCCHHHHHh
Confidence 89999999985 7778888875443 345677889999999999999999999999999999999999999999997
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCC-----------CCcccc
Q 014484 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD-----------GKSYST 146 (423)
Q Consensus 78 ~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~-----------~~~~~~ 146 (423)
......+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||.+..... .....|
T Consensus 119 ~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~g 197 (389)
T 3gni_B 119 THFMDGMNELAIAYILQGVLKALDYIHHMG-YVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVK 197 (389)
T ss_dssp HTCTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCGGGCEECEETTEECSCBCCCCTTCTT
T ss_pred hhcccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEcccccceeeccccccccccccccccccc
Confidence 655567999999999999999999999999 99999999999999999999999998754321 122467
Q ss_pred CcccCCcccccc--CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhcc----------------------
Q 014484 147 NLAFTPPEYMRT--GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD---------------------- 202 (423)
Q Consensus 147 t~~y~aPE~~~~--~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~---------------------- 202 (423)
|+.|+|||++.+ ..++.++|||||||++|+|++|..||..................
T Consensus 198 t~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (389)
T 3gni_B 198 VLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVA 277 (389)
T ss_dssp TGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC----------------------------
T ss_pred cccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCcccccccccccccccccccccc
Confidence 899999999987 57999999999999999999999998653211111100000000
Q ss_pred ------------------ccccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 203 ------------------SALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 203 ------------------~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
.......+..+++++.+||.+||+.||.+|||++++++|..
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~ 336 (389)
T 3gni_B 278 NSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSF 336 (389)
T ss_dssp ----------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGG
T ss_pred ccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHH
Confidence 00001123345678999999999999999999999998843
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-42 Score=325.28 Aligned_cols=244 Identities=21% Similarity=0.305 Sum_probs=202.7
Q ss_pred CCCCccceeee------ecceeeeeecCCCh--hhHHHHHHHHHHHhcCCCCCccceEeEEEeC--CceeEEEecCCCCC
Q 014484 2 GGRCSKFSICW------FHCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEA--DERLLVAEFMPNET 71 (423)
Q Consensus 2 G~~g~v~~~~~------~~~~~~~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e~~~~~~ 71 (423)
|+||.||.+++ .+..+++|++.... .....+.+|+++++.++||||+++++++.+. ...++||||+++++
T Consensus 42 G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~ 121 (318)
T 3lxp_A 42 GHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGS 121 (318)
T ss_dssp CSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEEECCCTTCB
T ss_pred CCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEEEecccCCc
Confidence 89999988876 35668888876543 4466789999999999999999999999985 56789999999999
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC-------cc
Q 014484 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-------SY 144 (423)
Q Consensus 72 L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-------~~ 144 (423)
|.+++.. ..+++..++.++.|++.||.|||+++ |+||||||+||+++.++.++|+|||+++...... ..
T Consensus 122 L~~~l~~---~~~~~~~~~~i~~~l~~~l~~LH~~~-ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~ 197 (318)
T 3lxp_A 122 LRDYLPR---HSIGLAQLLLFAQQICEGMAYLHAQH-YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDG 197 (318)
T ss_dssp HHHHGGG---SCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCGGGCEECCTTCSEEEC---C
T ss_pred HHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCchheEEEcCCCCEEECCccccccccccccccccccCC
Confidence 9999954 35999999999999999999999999 9999999999999999999999999998765432 33
Q ss_pred ccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHH----------hhhchhhhhccccccCCCChhHH
Q 014484 145 STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDL----------IRSKNFLLLMDSALEGHFSNDEG 214 (423)
Q Consensus 145 ~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~ 214 (423)
.+|..|+|||.+.+..++.++|||||||++|+|++|..||....... .........+........+..++
T Consensus 198 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (318)
T 3lxp_A 198 DSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCP 277 (318)
T ss_dssp CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCCCCCTTCC
T ss_pred CCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccCCCCCcccc
Confidence 56788999999998889999999999999999999998876542211 11112223333334445566778
Q ss_pred HHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhhhc
Q 014484 215 TELVRLASRCLQSEARERPNAKSLVISLMSLQKEA 249 (423)
Q Consensus 215 ~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~~~~~ 249 (423)
+++.++|.+||+.||.+|||+.++++.|+.+.+..
T Consensus 278 ~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 312 (318)
T 3lxp_A 278 AEVYHLMKNCWETEASFRPTFENLIPILKTVHEKY 312 (318)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhh
Confidence 89999999999999999999999999999887653
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-43 Score=322.12 Aligned_cols=240 Identities=21% Similarity=0.311 Sum_probs=195.1
Q ss_pred CCCCccceeeeecceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeC-CceeEEEecCCCCCHHhhhccCC
Q 014484 2 GGRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEA-DERLLVAEFMPNETLAKHLFHWE 80 (423)
Q Consensus 2 G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-~~~~lv~e~~~~~~L~~~i~~~~ 80 (423)
|+||.||.+.+.+..+++|++.... ..+.+.+|++++..++||||+++++++... +..++||||+++++|.+++....
T Consensus 32 G~~g~V~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~ 110 (278)
T 1byg_A 32 GEFGDVMLGDYRGNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRG 110 (278)
T ss_dssp CSSCEEEEEEETTEEEEEEECCCCC---HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHH
T ss_pred CCCceEEEEEEcCCEEEEEEecchh-HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCCCCHHHHHHhcc
Confidence 8999999999988889999887654 456789999999999999999999997654 46899999999999999996533
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-CccccCcccCCccccccC
Q 014484 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSYSTNLAFTPPEYMRTG 159 (423)
Q Consensus 81 ~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~~t~~y~aPE~~~~~ 159 (423)
...+++..++.++.|++.||.|||+++ ++||||||+||+++.++.++|+|||++...... ....+++.|+|||.+.+.
T Consensus 111 ~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~ 189 (278)
T 1byg_A 111 RSVLGGDCLLKFSLDVCEAMEYLEGNN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREK 189 (278)
T ss_dssp HHHCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTSCEEECCCCC------------CCTTTSCHHHHHHC
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHhCC-ccccCCCcceEEEeCCCcEEEeeccccccccccccCCCccccccCHHHhCCC
Confidence 334899999999999999999999999 999999999999999999999999998765543 334578899999999988
Q ss_pred CCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHH
Q 014484 160 RVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238 (423)
Q Consensus 160 ~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v 238 (423)
.++.++||||||+++|+|++ |..||..... ......+........+..+++.+.+++.+||+.||.+|||+.++
T Consensus 190 ~~~~~~Di~slG~il~~l~t~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l 264 (278)
T 1byg_A 190 KFSTKSDVWSFGILLWEIYSFGRVPYPRIPL-----KDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQL 264 (278)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTSCCSCTTSCG-----GGHHHHHTTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CCCchhcHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHhcCCCCCCcccCCHHHHHHHHHHhcCChhhCCCHHHH
Confidence 99999999999999999998 8888765321 12222222233344556678899999999999999999999999
Q ss_pred HHHHHhhhhh
Q 014484 239 VISLMSLQKE 248 (423)
Q Consensus 239 l~~l~~~~~~ 248 (423)
++.|+.+...
T Consensus 265 ~~~L~~i~~~ 274 (278)
T 1byg_A 265 REQLEHIKTH 274 (278)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 9999988654
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-42 Score=330.11 Aligned_cols=237 Identities=16% Similarity=0.138 Sum_probs=194.3
Q ss_pred CCCCccceeeee--cceeeeeecCCCh------hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHH
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD------LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLA 73 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 73 (423)
|+||.||++.+. +..+++|++.... ...+.+.+|+.++..++||||+++++++..++..|+||||++|++|.
T Consensus 35 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~ 114 (351)
T 3c0i_A 35 GPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLC 114 (351)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSSCBHH
T ss_pred CCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEeCCCCCCHH
Confidence 899999999874 6778888764322 23567899999999999999999999999999999999999999998
Q ss_pred hhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCC---eEEccccccccCCCC----Ccc
Q 014484 74 KHLFHW--ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGN---PRLSSFGLMKNSRDG----KSY 144 (423)
Q Consensus 74 ~~i~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~---~kl~Dfg~~~~~~~~----~~~ 144 (423)
+++... .+..+++..+..++.||+.||.|||+++ |+||||||+|||++.++. +||+|||+++..... ...
T Consensus 115 ~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~ 193 (351)
T 3c0i_A 115 FEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN-IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGR 193 (351)
T ss_dssp HHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECSSSTTCCEEECCCTTCEECCTTSCBCCCC
T ss_pred HHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCChHHeEEecCCCCCcEEEecCcceeEecCCCeeecCC
Confidence 877532 3446899999999999999999999999 999999999999986654 999999999876543 235
Q ss_pred ccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCC--CChhHHHHHHHHHH
Q 014484 145 STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGH--FSNDEGTELVRLAS 222 (423)
Q Consensus 145 ~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~ 222 (423)
.||+.|+|||++.+..++.++|||||||++|+|++|..||........ ........... ....+++++.++|.
T Consensus 194 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-----~~i~~~~~~~~~~~~~~~s~~~~~li~ 268 (351)
T 3c0i_A 194 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLF-----EGIIKGKYKMNPRQWSHISESAKDLVR 268 (351)
T ss_dssp CSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHHH-----HHHHHTCCCCCHHHHTTSCHHHHHHHH
T ss_pred cCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHHH-----HHHHcCCCCCCccccccCCHHHHHHHH
Confidence 689999999999988999999999999999999999999876422111 11111111000 01235678999999
Q ss_pred HhcccCcCCCCCHHHHHHHHHh
Q 014484 223 RCLQSEARERPNAKSLVISLMS 244 (423)
Q Consensus 223 ~cl~~dp~~Rps~~~vl~~l~~ 244 (423)
+||+.||.+|||+.++++|.+-
T Consensus 269 ~~L~~dP~~R~s~~e~l~hp~~ 290 (351)
T 3c0i_A 269 RMLMLDPAERITVYEALNHPWL 290 (351)
T ss_dssp HHTCSSTTTSCCHHHHHTSHHH
T ss_pred HHCCCChhHCcCHHHHhcChhh
Confidence 9999999999999999988654
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-42 Score=325.96 Aligned_cols=242 Identities=18% Similarity=0.282 Sum_probs=200.9
Q ss_pred CCCCccceeeee---------cceeeeeecCCCh--hhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCC
Q 014484 2 GGRCSKFSICWF---------HCHLKSSVLESSD--LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPN 69 (423)
Q Consensus 2 G~~g~v~~~~~~---------~~~~~~~~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 69 (423)
|+||.||.+.+. +..+++|++.... .....+.+|++++..+ +||||+++++++...+..++||||+++
T Consensus 46 G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 125 (334)
T 2pvf_A 46 GAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 125 (334)
T ss_dssp CSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCCEEEEECCTT
T ss_pred cCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCceEEEEECCCC
Confidence 899999999864 3457888776533 3456789999999999 899999999999999999999999999
Q ss_pred CCHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEcccccc
Q 014484 70 ETLAKHLFHWE--------------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLM 135 (423)
Q Consensus 70 ~~L~~~i~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~ 135 (423)
++|.+++.... ...+++..++.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||++
T Consensus 126 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~Dfg~~ 204 (334)
T 2pvf_A 126 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK-CIHRDLAARNVLVTENNVMKIADFGLA 204 (334)
T ss_dssp CBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred CcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCccceEEEcCCCCEEEcccccc
Confidence 99999996432 124899999999999999999999999 999999999999999999999999999
Q ss_pred ccCCCC------CccccCcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCC
Q 014484 136 KNSRDG------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGH 208 (423)
Q Consensus 136 ~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (423)
+..... ....+|+.|+|||++.+..++.++|||||||++|+|++ |..||....... ....+.......
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-----~~~~~~~~~~~~ 279 (334)
T 2pvf_A 205 RDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE-----LFKLLKEGHRMD 279 (334)
T ss_dssp EECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH-----HHHHHHHTCCCC
T ss_pred ccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHH-----HHHHHhcCCCCC
Confidence 866543 22345788999999998889999999999999999999 888876542221 122222222334
Q ss_pred CChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhhhc
Q 014484 209 FSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEA 249 (423)
Q Consensus 209 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~~~~~ 249 (423)
.+..++.++.+++.+||+.||.+|||+.+++++|+.+....
T Consensus 280 ~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~ 320 (334)
T 2pvf_A 280 KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT 320 (334)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence 55667889999999999999999999999999999987654
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-43 Score=329.23 Aligned_cols=237 Identities=15% Similarity=0.109 Sum_probs=192.7
Q ss_pred CCCCccceeeee--cceeeeeecCCCh--hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~ 77 (423)
|+||.||.+.+. +..+++|++.... ...+.+.+|+.+++.++||||+++++++.+++..++||||++|++|.+++.
T Consensus 18 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~ 97 (323)
T 3tki_A 18 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE 97 (323)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCTTEEGGGGSB
T ss_pred CCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcCCCCcHHHHHh
Confidence 899999999875 6778888775443 234678899999999999999999999999999999999999999999995
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC------CccccCcccC
Q 014484 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------KSYSTNLAFT 151 (423)
Q Consensus 78 ~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~------~~~~~t~~y~ 151 (423)
. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....||+.|+
T Consensus 98 ~--~~~~~~~~~~~i~~qi~~aL~~LH~~g-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~ 174 (323)
T 3tki_A 98 P--DIGMPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174 (323)
T ss_dssp T--TTBCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCSCCSCGGGS
T ss_pred h--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccccchHHEEEeCCCCEEEEEeeccceeccCCcccccCCCccCcCcc
Confidence 3 456999999999999999999999999 999999999999999999999999999754321 3457899999
Q ss_pred CccccccCCC-CCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcC
Q 014484 152 PPEYMRTGRV-TPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (423)
Q Consensus 152 aPE~~~~~~~-~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (423)
|||++.+..+ +.++|||||||++|+|++|..||......... ................+++++.++|.+||+.||.
T Consensus 175 aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 251 (323)
T 3tki_A 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE---YSDWKEKKTYLNPWKKIDSAPLALLHKILVENPS 251 (323)
T ss_dssp CHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHH---HHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTT
T ss_pred CcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHH---HHHHhcccccCCccccCCHHHHHHHHHHccCChh
Confidence 9999987775 77999999999999999999998654221111 1111111111112245678899999999999999
Q ss_pred CCCCHHHHHHHHHh
Q 014484 231 ERPNAKSLVISLMS 244 (423)
Q Consensus 231 ~Rps~~~vl~~l~~ 244 (423)
+|||++++++|.+-
T Consensus 252 ~R~t~~eil~h~~~ 265 (323)
T 3tki_A 252 ARITIPDIKKDRWY 265 (323)
T ss_dssp TSCCHHHHTTCTTT
T ss_pred hCcCHHHHhhChhh
Confidence 99999999988543
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-42 Score=330.85 Aligned_cols=235 Identities=14% Similarity=0.161 Sum_probs=194.4
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.+. +..+++|++.... .....+.+|++++..++||||++++++|.+.+..|+||||+.||+|..+
T Consensus 26 G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e~~~gg~L~~~ 105 (384)
T 4fr4_A 26 GSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYH 105 (384)
T ss_dssp CTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHH
T ss_pred CCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCCCcHHHH
Confidence 999999999875 5668888775433 2346788999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC---CccccCcccCC
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTP 152 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~~t~~y~a 152 (423)
+.. .+.+++..+..++.||+.||.|||++| |+||||||+|||++.+|.++|+|||+++..... ....||+.|+|
T Consensus 106 l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~gt~~Y~a 182 (384)
T 4fr4_A 106 LQQ--NVHFKEETVKLFICELVMALDYLQNQR-IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMA 182 (384)
T ss_dssp HHT--TCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCTTCCBCCCCSCGGGCC
T ss_pred HHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCcHHHeEECCCCCEEEeccceeeeccCCCceeccCCCccccC
Confidence 964 557999999999999999999999999 999999999999999999999999999866433 45678999999
Q ss_pred cccccc---CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCc
Q 014484 153 PEYMRT---GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEA 229 (423)
Q Consensus 153 PE~~~~---~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 229 (423)
||++.+ ..++.++|||||||++|+|++|..||........ ........ .....++..+++++.++|.+||+.||
T Consensus 183 PE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~--~~~~~~~~-~~~~~~p~~~s~~~~~li~~lL~~dP 259 (384)
T 4fr4_A 183 PEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS--KEIVHTFE-TTVVTYPSAWSQEMVSLLKKLLEPNP 259 (384)
T ss_dssp GGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCH--HHHHHHHH-HCCCCCCTTSCHHHHHHHHHHSCSSG
T ss_pred CeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccH--HHHHHHHh-hcccCCCCcCCHHHHHHHHHHhcCCH
Confidence 999874 4589999999999999999999999864321111 11111111 12234556678899999999999999
Q ss_pred CCCCC-HHHHHHHH
Q 014484 230 RERPN-AKSLVISL 242 (423)
Q Consensus 230 ~~Rps-~~~vl~~l 242 (423)
.+||+ ++++++|.
T Consensus 260 ~~R~s~~~~l~~hp 273 (384)
T 4fr4_A 260 DQRFSQLSDVQNFP 273 (384)
T ss_dssp GGSCCSHHHHHTSG
T ss_pred hHhcccHHHHHcCh
Confidence 99998 78877654
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-42 Score=325.84 Aligned_cols=242 Identities=15% Similarity=0.197 Sum_probs=191.8
Q ss_pred CCCCccceeeeecceeeeeecCCChhhHHHHHHHHHHHhcC--CCCCccceEeEEEeC----CceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNL--RSERLANLIGCCYEA----DERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~~~~~~~~~----~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.+.+..+++|++..... ..+.+|.+++..+ +||||+++++++... ...++||||+++|+|.++
T Consensus 48 G~~g~V~~~~~~~~~vavK~~~~~~~--~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~ 125 (337)
T 3mdy_A 48 GRYGEVWMGKWRGEKVAVKVFFTTEE--ASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDY 125 (337)
T ss_dssp ETTEEEEEEEETTEEEEEEEEEGGGH--HHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECCCTTCBHHHH
T ss_pred CCCeEEEEEEECCceEEEEEEecccc--chhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEeccCCCcHHHH
Confidence 89999999999999999998865543 3444555555554 999999999999988 678999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcC--------CCeeeccCCCCCeeecCCCCeEEccccccccCCCC------
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSK--------GRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------ 141 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--------~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~------ 141 (423)
+.. ..+++..++.++.|++.||.|||++ + |+||||||+|||++.++.+||+|||+++.....
T Consensus 126 l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~-ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 201 (337)
T 3mdy_A 126 LKS---TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDI 201 (337)
T ss_dssp HHH---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCC-EECSCCCGGGEEECTTSCEEECCCTTCEECC--------
T ss_pred hhc---cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCC-EEecccchHHEEECCCCCEEEEeCCCceeeccccccccC
Confidence 953 4699999999999999999999998 8 999999999999999999999999999765432
Q ss_pred --CccccCcccCCccccccCCCCCC------cceehhHHHHHHHhhC----------CCCCCchhhHHhhhchhhhh-cc
Q 014484 142 --KSYSTNLAFTPPEYMRTGRVTPE------SVVYSFGTMLLDLLSG----------KHIPPSHALDLIRSKNFLLL-MD 202 (423)
Q Consensus 142 --~~~~~t~~y~aPE~~~~~~~~~~------~Di~slG~~l~el~~g----------~~~~~~~~~~~~~~~~~~~~-~~ 202 (423)
....||+.|+|||++.+...+.. +|||||||++|||++| ..||................ ..
T Consensus 202 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 281 (337)
T 3mdy_A 202 PPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCI 281 (337)
T ss_dssp -CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTT
T ss_pred CCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhh
Confidence 23468999999999987776665 9999999999999999 55544321111111111111 11
Q ss_pred ccccCCCC-----hhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhhhc
Q 014484 203 SALEGHFS-----NDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEA 249 (423)
Q Consensus 203 ~~~~~~~~-----~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~~~~~ 249 (423)
......++ ..+++++.+++.+||+.||.+|||+.+++++|+.+.+..
T Consensus 282 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 333 (337)
T 3mdy_A 282 KKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ 333 (337)
T ss_dssp SCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred hccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence 12222233 267888999999999999999999999999999988764
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-42 Score=319.36 Aligned_cols=239 Identities=16% Similarity=0.161 Sum_probs=189.4
Q ss_pred CCCCccceeeee--cceeeeeecCCCh---hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
|+||.||.+.+. +..+++|++.... .....+.+|+.++++++||||+++++++.+++..++||||+.+ +|.+.+
T Consensus 13 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~ 91 (292)
T 3o0g_A 13 GTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYF 91 (292)
T ss_dssp CSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSE-EHHHHH
T ss_pred CCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecCCC-CHHHHH
Confidence 899999999984 6678888775432 2346788999999999999999999999999999999999987 666655
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccCC
Q 014484 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTP 152 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~a 152 (423)
.. ..+.+++..+..++.|++.||.|||++| |+||||||+||+++.++.+||+|||+++..... ....+|+.|+|
T Consensus 92 ~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~~-ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~a 169 (292)
T 3o0g_A 92 DS-CNGDLDPEIVKSFLFQLLKGLGFCHSRN-VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRP 169 (292)
T ss_dssp HH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCCCSCCSCGGGCC
T ss_pred Hh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEeecccceecCCccccccCCccccCCcC
Confidence 43 3567999999999999999999999999 999999999999999999999999999865432 34567999999
Q ss_pred ccccccCC-CCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccc------------------------cccC
Q 014484 153 PEYMRTGR-VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS------------------------ALEG 207 (423)
Q Consensus 153 PE~~~~~~-~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~ 207 (423)
||.+.+.. ++.++|||||||++|+|++|..|+............+...... ....
T Consensus 170 PE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (292)
T 3o0g_A 170 PDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLV 249 (292)
T ss_dssp HHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCT
T ss_pred hHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccccccccCCcchh
Confidence 99998766 8999999999999999999887754321111111111110000 0001
Q ss_pred CCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 208 HFSNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 208 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
...+.+++++.+||.+||+.||++|||++++++|-+
T Consensus 250 ~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 285 (292)
T 3o0g_A 250 NVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPY 285 (292)
T ss_dssp TTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred hcccccChHHHHHHHHHhccChhhCCCHHHHhcCcc
Confidence 122346788999999999999999999999998743
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-42 Score=333.99 Aligned_cols=238 Identities=13% Similarity=0.198 Sum_probs=193.6
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||.+.+. +..+++|++.+.. .....+.+|..++.++ +||||++++++|.+.+..|+||||++||+|..
T Consensus 63 G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~ 142 (396)
T 4dc2_A 63 GSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMF 142 (396)
T ss_dssp CSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHH
T ss_pred CCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEEcCCCCcHHH
Confidence 899999999885 5668888775432 2334578899999887 89999999999999999999999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCC----CCccccCccc
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNLAF 150 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~~t~~y 150 (423)
++.+ .+.+++..+..++.||+.||.|||+++ |+||||||+|||++.+|++||+|||+++.... .....||+.|
T Consensus 143 ~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~g-ivHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~~~~~~gt~~Y 219 (396)
T 4dc2_A 143 HMQR--QRKLPEEHARFYSAEISLALNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNY 219 (396)
T ss_dssp HHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCBCGGG
T ss_pred HHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EEeccCCHHHEEECCCCCEEEeecceeeecccCCCccccccCCccc
Confidence 9864 457999999999999999999999999 99999999999999999999999999985322 2446789999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhh----chhhhhccccccCCCChhHHHHHHHHHHHhcc
Q 014484 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRS----KNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (423)
Q Consensus 151 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (423)
+|||++.+..++.++|||||||++|||++|..||.......... ......+. .....++..+++++.+||.+||+
T Consensus 220 ~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~-~~~~~~p~~~s~~~~~li~~lL~ 298 (396)
T 4dc2_A 220 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVIL-EKQIRIPRSLSVKAASVLKSFLN 298 (396)
T ss_dssp CCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHH-HCCCCCCTTSCHHHHHHHHHHTC
T ss_pred CCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHh-ccccCCCCcCCHHHHHHHHHHhc
Confidence 99999999999999999999999999999999986432111110 00111111 12234566678899999999999
Q ss_pred cCcCCCCCH------HHHHHHHH
Q 014484 227 SEARERPNA------KSLVISLM 243 (423)
Q Consensus 227 ~dp~~Rps~------~~vl~~l~ 243 (423)
.||.+||++ +++++|..
T Consensus 299 ~dP~~R~~~~~~~~~~ei~~Hpf 321 (396)
T 4dc2_A 299 KDPKERLGCHPQTGFADIQGHPF 321 (396)
T ss_dssp SCTTTSTTCSTTTHHHHHHHSTT
T ss_pred CCHhHcCCCCCCCCHHHHhcCcc
Confidence 999999985 78887743
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-42 Score=319.68 Aligned_cols=240 Identities=20% Similarity=0.291 Sum_probs=200.6
Q ss_pred CCCCccceeeee-cceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccCC
Q 014484 2 GGRCSKFSICWF-HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80 (423)
Q Consensus 2 G~~g~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~ 80 (423)
|+||.||.+.+. +..+++|.+.......+.+.+|+++++.++||||+++++++.. +..++||||+++++|.+++....
T Consensus 24 G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~l~~~~ 102 (279)
T 1qpc_A 24 GQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPS 102 (279)
T ss_dssp ETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECCTTCBHHHHTTSHH
T ss_pred CCCeEEEEEEEcCCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEecCCCCCHHHHHhcCC
Confidence 899999999875 4568888887766667889999999999999999999999874 55899999999999999996433
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-----CccccCcccCCccc
Q 014484 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYSTNLAFTPPEY 155 (423)
Q Consensus 81 ~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~~t~~y~aPE~ 155 (423)
+..+++..++.++.|++.||.|||+++ ++||||||+||+++.++.++|+|||++...... ....++..|+|||.
T Consensus 103 ~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~ 181 (279)
T 1qpc_A 103 GIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEA 181 (279)
T ss_dssp HHTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHhhEEEcCCCCEEECCCcccccccCcccccccCCCCccCccChhh
Confidence 336999999999999999999999999 999999999999999999999999999866543 22345778999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCC
Q 014484 156 MRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (423)
Q Consensus 156 ~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (423)
+.+..++.++|||||||++|+|++ |..||....... ....+........+..+++++.+++.+||+.||.+|||
T Consensus 182 ~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps 256 (279)
T 1qpc_A 182 INYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE-----VIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 256 (279)
T ss_dssp HHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH-----HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred hccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHH-----HHHHHhcccCCCCcccccHHHHHHHHHHhccChhhCCC
Confidence 998889999999999999999999 887776542211 11122222233445567789999999999999999999
Q ss_pred HHHHHHHHHhhhhh
Q 014484 235 AKSLVISLMSLQKE 248 (423)
Q Consensus 235 ~~~vl~~l~~~~~~ 248 (423)
+.++++.|+.+...
T Consensus 257 ~~~l~~~l~~~~~~ 270 (279)
T 1qpc_A 257 FDYLRSVLEDFFTA 270 (279)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999987655
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-43 Score=329.87 Aligned_cols=233 Identities=17% Similarity=0.197 Sum_probs=195.0
Q ss_pred CCCCccceeeee--cceeeeeecCCChh----hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDL----GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.+. +..+++|++..... ....+.+|+.+++.++||||+++++++...+..++||||+ +|+|.++
T Consensus 20 G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~-~g~l~~~ 98 (336)
T 3h4j_B 20 GSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-GGELFDY 98 (336)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCC-CEEHHHH
T ss_pred CCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEECC-CCcHHHH
Confidence 899999999983 67788887754321 2357889999999999999999999999999999999999 6799998
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC---CccccCcccCC
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTP 152 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~~t~~y~a 152 (423)
+.. .+.+++..+..++.|++.||.|||++| |+||||||+|||++.++.+||+|||++...... ....||+.|+|
T Consensus 99 l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~~~~~~gt~~y~a 175 (336)
T 3h4j_B 99 IVE--KKRMTEDEGRRFFQQIICAIEYCHRHK-IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAA 175 (336)
T ss_dssp HHH--HCSCCHHHHHHHHHHHHHHHHHHHHHT-CCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBTTCCCTTSTTTSC
T ss_pred HHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCchhhEEEcCCCCEEEEEeccceeccCCcccccccCCcCcCC
Confidence 864 456999999999999999999999999 999999999999999999999999999866543 34568999999
Q ss_pred ccccccCCC-CCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCC
Q 014484 153 PEYMRTGRV-TPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARE 231 (423)
Q Consensus 153 PE~~~~~~~-~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (423)
||.+.+..+ +.++|||||||++|+|++|..||...... .....+. ......+..+++++.++|.+||+.||.+
T Consensus 176 PE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~-----~~~~~i~-~~~~~~p~~~s~~~~~li~~~L~~dP~~ 249 (336)
T 3h4j_B 176 PEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIP-----NLFKKVN-SCVYVMPDFLSPGAQSLIRRMIVADPMQ 249 (336)
T ss_dssp GGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSST-----TCBCCCC-SSCCCCCTTSCHHHHHHHHTTSCSSGGG
T ss_pred HHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHH-----HHHHHHH-cCCCCCcccCCHHHHHHHHHHcCCChhH
Confidence 999988776 78999999999999999999998754211 1111111 1122345567889999999999999999
Q ss_pred CCCHHHHHHHHHh
Q 014484 232 RPNAKSLVISLMS 244 (423)
Q Consensus 232 Rps~~~vl~~l~~ 244 (423)
|||++++++|.+-
T Consensus 250 Rpt~~eil~hp~~ 262 (336)
T 3h4j_B 250 RITIQEIRRDPWF 262 (336)
T ss_dssp SCCHHHHTTCHHH
T ss_pred CcCHHHHHhChhh
Confidence 9999999998664
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-42 Score=332.08 Aligned_cols=238 Identities=16% Similarity=0.130 Sum_probs=196.2
Q ss_pred CCCCccceeeee--cceeeeeecCCCh-hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
|+||.||.+.+. +..+++|++.... .....+.+|+.++..++||||+++++++.+.+..++||||+.|++|.+++..
T Consensus 62 G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~ 141 (387)
T 1kob_A 62 GAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAA 141 (387)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCCBHHHHTTC
T ss_pred CCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCCCCcHHHHHHh
Confidence 899999999885 6677888775543 3456788999999999999999999999999999999999999999999964
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecC--CCCeEEccccccccCCCCC---ccccCcccCCc
Q 014484 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK--DGNPRLSSFGLMKNSRDGK---SYSTNLAFTPP 153 (423)
Q Consensus 79 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~--~~~~kl~Dfg~~~~~~~~~---~~~~t~~y~aP 153 (423)
.+..+++..++.++.||+.||.|||+++ |+||||||+|||++. .+.+||+|||+++...... ...||+.|+||
T Consensus 142 -~~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aP 219 (387)
T 1kob_A 142 -EDYKMSEAEVINYMRQACEGLKHMHEHS-IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAP 219 (387)
T ss_dssp -TTCCBCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEEEECSSGGGCCH
T ss_pred -hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccchHHeEEecCCCCceEEEecccceecCCCcceeeeccCCCccCc
Confidence 3457999999999999999999999999 999999999999974 4679999999998765442 34689999999
Q ss_pred cccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCC
Q 014484 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERP 233 (423)
Q Consensus 154 E~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 233 (423)
|++.+..++.++|||||||++|+|++|..||........... + ..............+++++.++|.+||+.||.+||
T Consensus 220 E~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~-i-~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rp 297 (387)
T 1kob_A 220 EIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQN-V-KRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRL 297 (387)
T ss_dssp HHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHH-H-HHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSC
T ss_pred hhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHH-H-HhCCCCCCccccccCCHHHHHHHHHHcCCChhHCc
Confidence 999988899999999999999999999999876422211111 1 01111112223345678899999999999999999
Q ss_pred CHHHHHHHHH
Q 014484 234 NAKSLVISLM 243 (423)
Q Consensus 234 s~~~vl~~l~ 243 (423)
|+.++++|..
T Consensus 298 t~~ell~hp~ 307 (387)
T 1kob_A 298 TVHDALEHPW 307 (387)
T ss_dssp CHHHHHTSTT
T ss_pred CHHHHhhCcc
Confidence 9999998743
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-42 Score=319.57 Aligned_cols=242 Identities=18% Similarity=0.271 Sum_probs=185.9
Q ss_pred CCCCccceeeeecceeeeeecCCC---hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICWFHCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
|+||.||++.+.+ .+++|++... ......+.+|+.++++++||||+++++++ .....++||||++|++|.+++..
T Consensus 35 G~~g~Vy~~~~~~-~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~ 112 (289)
T 3og7_A 35 GSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGSSLYHHLHA 112 (289)
T ss_dssp CSSEEEEEEESSS-EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEECCCEEEHHHHHTT
T ss_pred CCCeEEEEEEEcC-ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEecCCCcHHHHHhh
Confidence 8999999998754 4677666432 34456789999999999999999999965 45568999999999999999954
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC------CccccCcccCC
Q 014484 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------KSYSTNLAFTP 152 (423)
Q Consensus 79 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~------~~~~~t~~y~a 152 (423)
....+++..++.++.|++.||.|||+++ |+||||||+||+++.++.++|+|||+++..... ....||+.|+|
T Consensus 113 -~~~~~~~~~~~~i~~qi~~~L~~lH~~~-i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~a 190 (289)
T 3og7_A 113 -SETKFEMKKLIDIARQTARGMDYLHAKS-IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMA 190 (289)
T ss_dssp -C---CCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEETTTEEEECCCC------------------CCCTTCC
T ss_pred -ccCCCCHHHHHHHHHHHHHHHHHHHhCC-cccccCccceEEECCCCCEEEccceeccccccccccccccccCCCccccC
Confidence 3557999999999999999999999999 999999999999999999999999998754421 23468999999
Q ss_pred ccccc---cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCc
Q 014484 153 PEYMR---TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEA 229 (423)
Q Consensus 153 PE~~~---~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 229 (423)
||.+. +..++.++|||||||++|+|++|..||............................+++++.+++.+||+.||
T Consensus 191 PE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p 270 (289)
T 3og7_A 191 PEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKR 270 (289)
T ss_dssp HHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSG
T ss_pred chhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhccccCCHHHHHHHHHHccCCh
Confidence 99986 556888999999999999999999998754222111111111111111222344677899999999999999
Q ss_pred CCCCCHHHHHHHHHhhhh
Q 014484 230 RERPNAKSLVISLMSLQK 247 (423)
Q Consensus 230 ~~Rps~~~vl~~l~~~~~ 247 (423)
.+|||+.++++.|+.+.+
T Consensus 271 ~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 271 DERPSFPRILAEIEELAR 288 (289)
T ss_dssp GGSCCHHHHHHHHHHTTC
T ss_pred hhCCCHHHHHHHHHHHhh
Confidence 999999999999988754
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-42 Score=317.93 Aligned_cols=239 Identities=20% Similarity=0.236 Sum_probs=195.6
Q ss_pred CCCCccceeeeec-----ceeeeeecCCC--hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWFH-----CHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~~-----~~~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||.+.+.. ..+++|.+... ......+.+|+.++..++||||+++++++.++ ..++||||+++++|.+
T Consensus 23 G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~v~e~~~~~~L~~ 101 (281)
T 3cc6_A 23 GFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTWIIMELYPYGELGH 101 (281)
T ss_dssp CSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCEEEEECCTTCBHHH
T ss_pred cCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCEEEEecCCCCCHHH
Confidence 8999999998753 23777777553 34567889999999999999999999998754 5789999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-----CccccCcc
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYSTNLA 149 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~~t~~ 149 (423)
++.. ....+++..++.++.|++.||.|||+++ ++||||||+||+++.++.++|+|||++...... ....+|+.
T Consensus 102 ~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~ 179 (281)
T 3cc6_A 102 YLER-NKNSLKVLTLVLYSLQICKAMAYLESIN-CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIK 179 (281)
T ss_dssp HHHH-HTTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEEEETTEEEECCCCGGGCC---------CCCCCGG
T ss_pred HHHh-ccccCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCccceEEECCCCcEEeCccCCCcccccccccccccCCCCcc
Confidence 9964 3456999999999999999999999999 999999999999999999999999998865543 23346788
Q ss_pred cCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccC
Q 014484 150 FTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSE 228 (423)
Q Consensus 150 y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 228 (423)
|+|||.+.+..++.++|||||||++|+|++ |..||...... .....+........+..+++.+.+++.+||+.|
T Consensus 180 y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~ 254 (281)
T 3cc6_A 180 WMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK-----DVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYD 254 (281)
T ss_dssp GCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGG-----GHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred eeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChH-----HHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCC
Confidence 999999998899999999999999999998 99887643211 111222222223345556788999999999999
Q ss_pred cCCCCCHHHHHHHHHhhhhh
Q 014484 229 ARERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 229 p~~Rps~~~vl~~l~~~~~~ 248 (423)
|.+|||+.+++++|..+...
T Consensus 255 p~~Rps~~ell~~L~~~~~~ 274 (281)
T 3cc6_A 255 PSDRPRFTELVCSLSDVYQM 274 (281)
T ss_dssp GGGSCCHHHHHHHHHHHHHH
T ss_pred chhCcCHHHHHHHHHHHHHh
Confidence 99999999999999887643
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-43 Score=330.06 Aligned_cols=232 Identities=16% Similarity=0.217 Sum_probs=195.4
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||.+.+. +..+++|++.... .....+..|..++..+ +||||+++++++.+.+..|+||||++||+|.+
T Consensus 28 G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~ 107 (345)
T 1xjd_A 28 GSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMY 107 (345)
T ss_dssp CSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHH
T ss_pred CCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEeCCCCCcHHH
Confidence 899999999985 6778888876542 2345678899999887 99999999999999999999999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCC----CCccccCccc
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNLAF 150 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~~t~~y 150 (423)
++.. .+.+++..+..++.||+.||.|||++| |+||||||+|||++.+|++||+|||+++.... .....||+.|
T Consensus 108 ~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y 184 (345)
T 1xjd_A 108 HIQS--CHKFDLSRATFYAAEIILGLQFLHSKG-IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDY 184 (345)
T ss_dssp HHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCSCGGG
T ss_pred HHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCChhhEEECCCCCEEEeEChhhhhcccCCCcccCCCCCccc
Confidence 9964 356999999999999999999999999 99999999999999999999999999986432 2346789999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcC
Q 014484 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (423)
Q Consensus 151 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (423)
+|||++.+..++.++|||||||++|||++|..||......... ..+.. ....++..+++++.++|.+||+.||.
T Consensus 185 ~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~----~~i~~--~~~~~p~~~s~~~~~li~~lL~~dp~ 258 (345)
T 1xjd_A 185 IAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELF----HSIRM--DNPFYPRWLEKEAKDLLVKLFVREPE 258 (345)
T ss_dssp CCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHH--CCCCCCTTSCHHHHHHHHHHSCSSGG
T ss_pred CChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHH----HHHHh--CCCCCCcccCHHHHHHHHHHhcCCHh
Confidence 9999999989999999999999999999999998765322211 11111 12234556788999999999999999
Q ss_pred CCCCHH-HHHHHH
Q 014484 231 ERPNAK-SLVISL 242 (423)
Q Consensus 231 ~Rps~~-~vl~~l 242 (423)
+||++. ++++|.
T Consensus 259 ~R~~~~~~i~~hp 271 (345)
T 1xjd_A 259 KRLGVRGDIRQHP 271 (345)
T ss_dssp GSBTTBSCGGGSG
T ss_pred HcCCChHHHHcCc
Confidence 999997 777664
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-42 Score=331.61 Aligned_cols=237 Identities=16% Similarity=0.121 Sum_probs=193.3
Q ss_pred CCCCccceeeee--cceeeeeecCCCh-hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
|+||.||++.+. +..+++|++.... ...+.+.+|++++..++||||+++++++...+..++||||++|++|.+++..
T Consensus 100 G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~ 179 (373)
T 2x4f_A 100 GRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIID 179 (373)
T ss_dssp ----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEEHHHHHH
T ss_pred CcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcHHHHHHh
Confidence 899999999874 6778888876544 4567889999999999999999999999999999999999999999998864
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeee--cCCCCeEEccccccccCCCC---CccccCcccCCc
Q 014484 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILF--DKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTPP 153 (423)
Q Consensus 79 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill--~~~~~~kl~Dfg~~~~~~~~---~~~~~t~~y~aP 153 (423)
....+++..++.++.||+.||.|||+++ |+||||||+|||+ +.++.+||+|||+++..... ....||+.|+||
T Consensus 180 -~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aP 257 (373)
T 2x4f_A 180 -ESYNLTELDTILFMKQICEGIRHMHQMY-ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAP 257 (373)
T ss_dssp -TGGGCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCCCCSSCTTCCH
T ss_pred -cCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCCHHHEEEecCCCCcEEEEeCCCceecCCccccccccCCCcEeCh
Confidence 3446999999999999999999999999 9999999999999 56778999999999876543 234689999999
Q ss_pred cccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhcccc--ccCCCChhHHHHHHHHHHHhcccCcCC
Q 014484 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSA--LEGHFSNDEGTELVRLASRCLQSEARE 231 (423)
Q Consensus 154 E~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (423)
|++.+..++.++|||||||++|+|++|..||......... ..+.... ........+++++.+||.+||+.||.+
T Consensus 258 E~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~ 333 (373)
T 2x4f_A 258 EVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETL----NNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSW 333 (373)
T ss_dssp HHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH----HHHHHTCCCSCSGGGTTSCHHHHHHHHTTSCSSGGG
T ss_pred hhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHH----HHHHhccCCCChhhhccCCHHHHHHHHHHcCCChhh
Confidence 9999888999999999999999999999998765322111 1111111 111112345788999999999999999
Q ss_pred CCCHHHHHHHHHh
Q 014484 232 RPNAKSLVISLMS 244 (423)
Q Consensus 232 Rps~~~vl~~l~~ 244 (423)
|||+.++++|..-
T Consensus 334 Rps~~e~l~hp~~ 346 (373)
T 2x4f_A 334 RISASEALKHPWL 346 (373)
T ss_dssp SCCHHHHHHSHHH
T ss_pred CCCHHHHhcCcCc
Confidence 9999999998553
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-42 Score=336.02 Aligned_cols=239 Identities=13% Similarity=0.125 Sum_probs=186.3
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHHhc-CCCCCccceEeEEEe----CCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGN-LRSERLANLIGCCYE----ADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~----~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||.+.+. +..+++|++... ..+.+|+.++.+ .+||||+++++++.. +..+|+||||++||+|.+
T Consensus 73 G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~gg~L~~ 148 (400)
T 1nxk_A 73 GINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFS 148 (400)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHH
T ss_pred ccCeEEEEEEECCCCCEEEEEEeCcc----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCCCCcHHH
Confidence 899999999885 677888887543 456788888754 489999999999976 556899999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecC---CCCeEEccccccccCCCC---CccccCc
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK---DGNPRLSSFGLMKNSRDG---KSYSTNL 148 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~---~~~~kl~Dfg~~~~~~~~---~~~~~t~ 148 (423)
++.......+++..+..++.||+.||.|||+++ |+||||||+|||++. ++.+||+|||+++..... ....||+
T Consensus 149 ~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~ 227 (400)
T 1nxk_A 149 RIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN-IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTP 227 (400)
T ss_dssp HHHCC---CCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSTTCCEEECCCTTCEECC-----------C
T ss_pred HHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCcCcceEEEecCCCCccEEEEecccccccCCCCccccCCCCC
Confidence 997644557999999999999999999999999 999999999999987 788999999999866543 3456899
Q ss_pred ccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccc--cCCCChhHHHHHHHHHHHhcc
Q 014484 149 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSAL--EGHFSNDEGTELVRLASRCLQ 226 (423)
Q Consensus 149 ~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~cl~ 226 (423)
.|+|||++.+..++.++|||||||++|+|++|..||...............+..... .......++.++.+||.+||+
T Consensus 228 ~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~ 307 (400)
T 1nxk_A 228 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLK 307 (400)
T ss_dssp TTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTTSCHHHHHHHHTTSC
T ss_pred CccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCcccccCCHHHHHHHHHHCC
Confidence 999999999889999999999999999999999998654211110001111111111 111123567889999999999
Q ss_pred cCcCCCCCHHHHHHHHHhh
Q 014484 227 SEARERPNAKSLVISLMSL 245 (423)
Q Consensus 227 ~dp~~Rps~~~vl~~l~~~ 245 (423)
.||.+|||+.++++|.+-.
T Consensus 308 ~dP~~Rpt~~eil~hp~~~ 326 (400)
T 1nxk_A 308 TEPTQRMTITEFMNHPWIM 326 (400)
T ss_dssp SSGGGSCCHHHHHHSHHHH
T ss_pred CChhHCcCHHHHhcCcccc
Confidence 9999999999999986643
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-42 Score=319.50 Aligned_cols=241 Identities=19% Similarity=0.254 Sum_probs=193.5
Q ss_pred CCCCccceeeeec-----ceeeeeecCCC--hhhHHHHHHHHHHHhcCCCCCccceEeEEEe-CCceeEEEecCCCCCHH
Q 014484 2 GGRCSKFSICWFH-----CHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYE-ADERLLVAEFMPNETLA 73 (423)
Q Consensus 2 G~~g~v~~~~~~~-----~~~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~~~~~~L~ 73 (423)
|+||.||++.+.. ..+++|.+... ......+.+|+.++++++||||+++++++.. ++..++||||+++++|.
T Consensus 36 G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~ 115 (298)
T 3f66_A 36 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 115 (298)
T ss_dssp ETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEECCTTCBHH
T ss_pred cCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEEeCCCCCCHH
Confidence 8999999998742 23666666542 3345678999999999999999999999654 55689999999999999
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC--------Cccc
Q 014484 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--------KSYS 145 (423)
Q Consensus 74 ~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--------~~~~ 145 (423)
+++.. ....+++..++.++.|++.||.|||+++ ++||||||+||+++.++.++|+|||+++..... ....
T Consensus 116 ~~l~~-~~~~~~~~~~~~i~~ql~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~ 193 (298)
T 3f66_A 116 NFIRN-ETHNPTVKDLIGFGLQVAKGMKYLASKK-FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 193 (298)
T ss_dssp HHHHC-TTCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGGCBC-----CC
T ss_pred HHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCchheEEECCCCCEEECcccccccccccchhccccccCCC
Confidence 99964 4556899999999999999999999999 999999999999999999999999999765432 2344
Q ss_pred cCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhc
Q 014484 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCL 225 (423)
Q Consensus 146 ~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 225 (423)
+|+.|+|||.+.+..++.++|||||||++|+|++|..|+.... .................+..++.++.+++.+||
T Consensus 194 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 269 (298)
T 3f66_A 194 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV----NTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCW 269 (298)
T ss_dssp BCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTS----CTTTHHHHHHTTCCCCCCTTCCHHHHHHHHHHT
T ss_pred CCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccC----CHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHc
Confidence 6788999999998899999999999999999999654443321 111111122222233345556788999999999
Q ss_pred ccCcCCCCCHHHHHHHHHhhhhh
Q 014484 226 QSEARERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 226 ~~dp~~Rps~~~vl~~l~~~~~~ 248 (423)
+.||.+|||+.++++.|..+...
T Consensus 270 ~~~p~~Rps~~ell~~L~~~~~~ 292 (298)
T 3f66_A 270 HPKAEMRPSFSELVSRISAIFST 292 (298)
T ss_dssp CSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CCChhhCcCHHHHHHHHHHHHHh
Confidence 99999999999999999988765
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-42 Score=325.81 Aligned_cols=232 Identities=17% Similarity=0.257 Sum_probs=185.7
Q ss_pred CCCCccceeeee--cceeeeeecCC--ChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCc------------------
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLES--SDLGETLNLEEAKAVGNLRSERLANLIGCCYEADE------------------ 59 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~------------------ 59 (423)
|+||.||++.+. +..+++|++.. .....+.+.+|++++++++||||++++++|.+...
T Consensus 17 G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (332)
T 3qd2_B 17 GGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTD 96 (332)
T ss_dssp C-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC---------
T ss_pred CCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhhhhhcccccc
Confidence 899999999985 67788888753 33356789999999999999999999999876543
Q ss_pred ---------------------------------------eeEEEecCCCCCHHhhhccCCC-CCCCHHHHHHHHHHHHHH
Q 014484 60 ---------------------------------------RLLVAEFMPNETLAKHLFHWET-QPMKWAMRLRVALYLAQA 99 (423)
Q Consensus 60 ---------------------------------------~~lv~e~~~~~~L~~~i~~~~~-~~~~~~~~~~i~~qi~~~ 99 (423)
.++|||||+|++|.+++.+... ...++..++.++.||+.|
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~qi~~a 176 (332)
T 3qd2_B 97 WPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEA 176 (332)
T ss_dssp -----------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHHHHHHHHHHHHH
T ss_pred ccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHHHHHHHHHHHHH
Confidence 7899999999999999964322 235677899999999999
Q ss_pred HHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----------------CccccCcccCCccccccCCCCC
Q 014484 100 LEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----------------KSYSTNLAFTPPEYMRTGRVTP 163 (423)
Q Consensus 100 l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----------------~~~~~t~~y~aPE~~~~~~~~~ 163 (423)
|.|||+++ |+||||||+||+++.++.+||+|||+++..... ....||+.|+|||.+.+..++.
T Consensus 177 L~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ 255 (332)
T 3qd2_B 177 VEFLHSKG-LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSH 255 (332)
T ss_dssp HHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSCHHHHHCCCCCT
T ss_pred HHHHHhCC-eeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccChHHhcCCCCcc
Confidence 99999999 999999999999999999999999999866543 2346899999999999989999
Q ss_pred CcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014484 164 ESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (423)
Q Consensus 164 ~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~ 241 (423)
++|||||||++|+|++|..|+.... ..................++++.++|.+||+.||.+|||++++++|
T Consensus 256 ~~Di~slG~il~el~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 256 KVDIFSLGLILFELLYSFSTQMERV-------RIITDVRNLKFPLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHHHHHHHHHHHHHSCCCCHHHHH-------HHHHHHHTTCCCHHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHS
T ss_pred hhhHHHHHHHHHHHHHcCCChhHHH-------HHHHHhhccCCCcccccCChhHHHHHHHHccCCCCcCCCHHHHhhc
Confidence 9999999999999999975532211 0111111111111123456778999999999999999999999976
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-43 Score=338.11 Aligned_cols=235 Identities=17% Similarity=0.187 Sum_probs=195.6
Q ss_pred CCCCccceeeee--cceeeeeecCCChh----hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDL----GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.+. +..+++|++.+... ....+.+|+.++..++||||++++++|.+++..|+||||++||+|.++
T Consensus 80 G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~ 159 (410)
T 3v8s_A 80 GAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNL 159 (410)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHH
T ss_pred CCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcHHHH
Confidence 899999999885 66788888754322 234578999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-----CccccCccc
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYSTNLAF 150 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~~t~~y 150 (423)
+.+ ..+++..+..++.||+.||.|||+++ |+||||||+|||++.+|++||+|||+++..... .+..||+.|
T Consensus 160 l~~---~~~~e~~~~~~~~qi~~aL~~LH~~g-ivHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~gt~~Y 235 (410)
T 3v8s_A 160 MSN---YDVPEKWARFYTAEVVLALDAIHSMG-FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDY 235 (410)
T ss_dssp HHH---CCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCTTSEEECCSCCSCGGG
T ss_pred HHc---CCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCCHHHeeECCCCCEEEeccceeEeeccCCcccccCCcCCccc
Confidence 953 46999999999999999999999999 999999999999999999999999999876543 256799999
Q ss_pred CCccccccCC----CCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCC--hhHHHHHHHHHHHh
Q 014484 151 TPPEYMRTGR----VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFS--NDEGTELVRLASRC 224 (423)
Q Consensus 151 ~aPE~~~~~~----~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~c 224 (423)
+|||++.+.. ++.++|||||||++|||++|..||........ ...+........++ ..+++++.+||.+|
T Consensus 236 ~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~----~~~i~~~~~~~~~p~~~~~s~~~~~li~~l 311 (410)
T 3v8s_A 236 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT----YSKIMNHKNSLTFPDDNDISKEAKNLICAF 311 (410)
T ss_dssp CCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHH----HHHHHTHHHHCCCCTTCCCCHHHHHHHHHH
T ss_pred cCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhH----HHHHHhccccccCCCcccccHHHHHHHHHH
Confidence 9999998665 78999999999999999999999876532222 12222211111222 34678899999999
Q ss_pred cccCcCC--CCCHHHHHHHHHh
Q 014484 225 LQSEARE--RPNAKSLVISLMS 244 (423)
Q Consensus 225 l~~dp~~--Rps~~~vl~~l~~ 244 (423)
|+.+|.+ ||+++++++|..-
T Consensus 312 L~~~~~rlgR~~~~ei~~Hp~f 333 (410)
T 3v8s_A 312 LTDREVRLGRNGVEEIKRHLFF 333 (410)
T ss_dssp SSCGGGCTTSSCHHHHHTSGGG
T ss_pred ccChhhhCCCCCHHHHhcCccc
Confidence 9999988 9999999998654
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-42 Score=320.94 Aligned_cols=238 Identities=17% Similarity=0.172 Sum_probs=188.9
Q ss_pred CCCCccceeeee-cceeeeeecCCChh---hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhc
Q 014484 2 GGRCSKFSICWF-HCHLKSSVLESSDL---GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (423)
Q Consensus 2 G~~g~v~~~~~~-~~~~~~~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~ 77 (423)
|+||.||.+.+. +..+++|++..... ....+.+|+++++.++||||+++++++.+++..++||||+++ +|.+++.
T Consensus 32 G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~ 110 (311)
T 3niz_A 32 GTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLD 110 (311)
T ss_dssp CSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECCSE-EHHHHHH
T ss_pred CCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCCCC-CHHHHHH
Confidence 899999999984 67788887754332 246788999999999999999999999999999999999986 8888875
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccCCc
Q 014484 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPP 153 (423)
Q Consensus 78 ~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~aP 153 (423)
. ....+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....+|+.|+||
T Consensus 111 ~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aP 188 (311)
T 3niz_A 111 E-NKTGLQDSQIKIYLYQLLRGVAHCHQHR-ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAP 188 (311)
T ss_dssp T-CTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC---CCCCCCTTCCH
T ss_pred h-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCchHhEEECCCCCEEEccCcCceecCCCcccccCCcccCCcCCH
Confidence 4 3456999999999999999999999999 999999999999999999999999999865432 334679999999
Q ss_pred ccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhcccccc--------------------C-----
Q 014484 154 EYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALE--------------------G----- 207 (423)
Q Consensus 154 E~~~~-~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~----- 207 (423)
|++.+ ..++.++|||||||++|+|++|..||............ ......... .
T Consensus 189 E~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (311)
T 3niz_A 189 DVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKI-FSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWS 267 (311)
T ss_dssp HHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHH-HHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHH
T ss_pred HHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHH-HHHHCCCChHHhhhhhccchhhhcccccccCCcHH
Confidence 99876 45899999999999999999999998754222111110 000000000 0
Q ss_pred CCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 208 HFSNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 208 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
...+.+++++.+||.+||+.||.+|||++++++|..
T Consensus 268 ~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 303 (311)
T 3niz_A 268 SIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPY 303 (311)
T ss_dssp HHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGG
T ss_pred HhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCcc
Confidence 011234578999999999999999999999998743
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-41 Score=316.72 Aligned_cols=242 Identities=24% Similarity=0.375 Sum_probs=199.7
Q ss_pred CCCCccceeeeecceeeeeecCCC-----hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWFHCHLKSSVLESS-----DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~~~~~~~~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
|+||.||++.+.+..+++|.+... ......+.+|+.++..++||||+++++++...+..++||||+++++|.+++
T Consensus 42 G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l 121 (307)
T 2nru_A 42 GGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL 121 (307)
T ss_dssp CSSEEEEEEESSSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHH
T ss_pred CCCeEEEEEEECCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEEecCCCcHHHHH
Confidence 899999999998888888877542 234667899999999999999999999999999999999999999999998
Q ss_pred ccC-CCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC------CccccCcc
Q 014484 77 FHW-ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------KSYSTNLA 149 (423)
Q Consensus 77 ~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~------~~~~~t~~ 149 (423)
... ....+++..++.++.|++.||.|||+++ ++||||||+||+++.++.++|+|||+++..... ....||+.
T Consensus 122 ~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~ 200 (307)
T 2nru_A 122 SCLDGTPPLSWHMRCKIAQGAANGINFLHENH-HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTA 200 (307)
T ss_dssp HTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGG
T ss_pred HhccCCCCCCHHHHHHHHHHHHHHHHHHhcCC-eecCCCCHHHEEEcCCCcEEEeecccccccccccccccccccCCCcC
Confidence 632 2456999999999999999999999999 999999999999999999999999998765432 23468999
Q ss_pred cCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhh----------hchhhhhccccccCCCChhHHHHHHH
Q 014484 150 FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIR----------SKNFLLLMDSALEGHFSNDEGTELVR 219 (423)
Q Consensus 150 y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~l~~ 219 (423)
|+|||.+.+ .++.++|||||||++|+|++|..||......... ...+...+.. .....+...+..+.+
T Consensus 201 y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~ 278 (307)
T 2nru_A 201 YMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDK-KMNDADSTSVEAMYS 278 (307)
T ss_dssp GCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCS-SCSCCCHHHHHHHHH
T ss_pred cCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccc-cccccchHHHHHHHH
Confidence 999998874 5889999999999999999999887653211000 0001111111 123345677889999
Q ss_pred HHHHhcccCcCCCCCHHHHHHHHHhhh
Q 014484 220 LASRCLQSEARERPNAKSLVISLMSLQ 246 (423)
Q Consensus 220 li~~cl~~dp~~Rps~~~vl~~l~~~~ 246 (423)
++.+||+.||.+|||+.+++++|+.+.
T Consensus 279 li~~cl~~~p~~Rps~~~l~~~L~~l~ 305 (307)
T 2nru_A 279 VASQCLHEKKNKRPDIKKVQQLLQEMT 305 (307)
T ss_dssp HHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred HHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 999999999999999999999998864
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-42 Score=320.44 Aligned_cols=245 Identities=12% Similarity=0.056 Sum_probs=198.5
Q ss_pred CCCCccceeee--ecceeeeeecCCChhhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~--~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
|+||.||.+.+ .+..+++|++.... ....+.+|+.++..+ +|+|++++++++..+...++||||+ +++|.+++..
T Consensus 21 G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~ 98 (298)
T 1csn_A 21 GSFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDL 98 (298)
T ss_dssp CSSCEEEEEEETTTTEEEEEEEEECCT-TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHH
T ss_pred cCCEEEEEEEECCCCcEEEEEEeccCC-ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-CCCHHHHHHH
Confidence 89999999995 47788888875443 345688999999999 8999999999999999999999999 8999999965
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCC-----eEEccccccccCCCC-----------C
Q 014484 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGN-----PRLSSFGLMKNSRDG-----------K 142 (423)
Q Consensus 79 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~-----~kl~Dfg~~~~~~~~-----------~ 142 (423)
.+..+++..++.++.||+.||.|||+++ |+||||||+||+++.++. ++|+|||+++..... .
T Consensus 99 -~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~ 176 (298)
T 1csn_A 99 -CGRKFSVKTVAMAAKQMLARVQSIHEKS-LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKK 176 (298)
T ss_dssp -TTTCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCC
T ss_pred -hccCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEeccCCCCCCCeEEEEECccccccccccccccccccCcc
Confidence 3456999999999999999999999999 999999999999987765 999999999765432 3
Q ss_pred ccccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhH--HhhhchhhhhccccccCCCChhHHHHHHHH
Q 014484 143 SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALD--LIRSKNFLLLMDSALEGHFSNDEGTELVRL 220 (423)
Q Consensus 143 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 220 (423)
...||+.|+|||.+.+..++.++|||||||++|+|++|..||...... ......+...............+++++.++
T Consensus 177 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 256 (298)
T 1csn_A 177 NLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKY 256 (298)
T ss_dssp CCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHH
T ss_pred CCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccHHHHHhhCcHHHHHH
Confidence 346899999999999888999999999999999999999998763110 000001111100011111223457789999
Q ss_pred HHHhcccCcCCCCCHHHHHHHHHhhhhhcc
Q 014484 221 ASRCLQSEARERPNAKSLVISLMSLQKEAE 250 (423)
Q Consensus 221 i~~cl~~dp~~Rps~~~vl~~l~~~~~~~~ 250 (423)
+.+||+.||.+|||++++++.|..+.+...
T Consensus 257 i~~~l~~dp~~RP~~~~l~~~l~~~~~~~~ 286 (298)
T 1csn_A 257 MHYARNLAFDATPDYDYLQGLFSKVLERLN 286 (298)
T ss_dssp HHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred HHHHhcCCcccCCCHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999887643
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-42 Score=330.33 Aligned_cols=241 Identities=18% Similarity=0.244 Sum_probs=188.5
Q ss_pred CCCCccceeeeec-----ceeeeeecCCC--hhhHHHHHHHHHHHhcCCCCCccceEeEEEe-CCceeEEEecCCCCCHH
Q 014484 2 GGRCSKFSICWFH-----CHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYE-ADERLLVAEFMPNETLA 73 (423)
Q Consensus 2 G~~g~v~~~~~~~-----~~~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~~~~~~L~ 73 (423)
|+||.||++.+.. ..+++|.+... ......+.+|+.++++++||||+++++++.. ++..++||||+++|+|.
T Consensus 100 G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e~~~~g~L~ 179 (373)
T 3c1x_A 100 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 179 (373)
T ss_dssp CSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEECCTTCBHH
T ss_pred CCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEECCCCCCHH
Confidence 8999999998752 34677766442 2456789999999999999999999999765 45789999999999999
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC--------Cccc
Q 014484 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--------KSYS 145 (423)
Q Consensus 74 ~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--------~~~~ 145 (423)
+++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....
T Consensus 180 ~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~ 257 (373)
T 3c1x_A 180 NFIRN-ETHNPTVKDLIGFGLQVAKGMKFLASKK-FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAK 257 (373)
T ss_dssp HHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCC---------------------
T ss_pred HHHhh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-EecCccchheEEECCCCCEEEeeccccccccccccccccccCCCC
Confidence 99964 4456899999999999999999999999 999999999999999999999999999755332 2234
Q ss_pred cCcccCCccccccCCCCCCcceehhHHHHHHHhhC-CCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHh
Q 014484 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSG-KHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRC 224 (423)
Q Consensus 146 ~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 224 (423)
+|+.|+|||.+.+..++.++|||||||++|||++| .+||.... .......+........+..++.++.+++.+|
T Consensus 258 ~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~-----~~~~~~~~~~~~~~~~p~~~~~~l~~li~~c 332 (373)
T 3c1x_A 258 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN-----TFDITVYLLQGRRLLQPEYCPDPLYEVMLKC 332 (373)
T ss_dssp CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSC-----SSCHHHHHHTTCCCCCCTTCCHHHHHHHHHH
T ss_pred CcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCC-----HHHHHHHHHcCCCCCCCCCCCHHHHHHHHHH
Confidence 57789999999999999999999999999999994 55554321 1111111112222334556778899999999
Q ss_pred cccCcCCCCCHHHHHHHHHhhhhhc
Q 014484 225 LQSEARERPNAKSLVISLMSLQKEA 249 (423)
Q Consensus 225 l~~dp~~Rps~~~vl~~l~~~~~~~ 249 (423)
|+.||.+|||+.+++++|..+....
T Consensus 333 l~~dp~~RPs~~ell~~L~~i~~~~ 357 (373)
T 3c1x_A 333 WHPKAEMRPSFSELVSRISAIFSTF 357 (373)
T ss_dssp TCSSGGGSCCHHHHHHHHHHHHHTC
T ss_pred cCCChhhCcCHHHHHHHHHHHHHhc
Confidence 9999999999999999999887653
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-42 Score=325.90 Aligned_cols=245 Identities=20% Similarity=0.245 Sum_probs=200.4
Q ss_pred CCCCccceeee------ecceeeeeecCCCh-hhHHHHHHHHHHHhcCCCCCccceEeEEEe--CCceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICW------FHCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYE--ADERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~------~~~~~~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~~~~~L 72 (423)
|+||.||.+.+ .+..+++|++.... .....+.+|++++.+++||||+++++++.. ....++||||+++++|
T Consensus 34 G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L 113 (327)
T 3lxl_A 34 GNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCL 113 (327)
T ss_dssp ETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEEEECCTTCBH
T ss_pred CCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEEEeecCCCCH
Confidence 89999999985 36678888876554 345678999999999999999999999874 4558899999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-------Cccc
Q 014484 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-------KSYS 145 (423)
Q Consensus 73 ~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-------~~~~ 145 (423)
.+++... ...+++..++.++.|++.||.|||+++ |+||||||+||+++.++.++|+|||+++..... ....
T Consensus 114 ~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~ 191 (327)
T 3lxl_A 114 RDFLQRH-RARLDASRLLLYSSQICKGMEYLGSRR-CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQ 191 (327)
T ss_dssp HHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCGGGCEECCTTCSEEECSSCCC
T ss_pred HHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCChhhEEECCCCCEEEcccccceecccCCccceeeccCC
Confidence 9999642 346999999999999999999999999 999999999999999999999999999866533 2234
Q ss_pred cCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhh----------chhhhhccccccCCCChhHHH
Q 014484 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRS----------KNFLLLMDSALEGHFSNDEGT 215 (423)
Q Consensus 146 ~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~ 215 (423)
+|+.|+|||.+.+..++.++|||||||++|+|++|..||.......... ...............+..+++
T Consensus 192 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (327)
T 3lxl_A 192 SPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPPACPA 271 (327)
T ss_dssp SCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTCCCCCCTTCCH
T ss_pred ccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhcccCCCCCCcccH
Confidence 6788999999998889999999999999999999998876543221111 112222333334445667788
Q ss_pred HHHHHHHHhcccCcCCCCCHHHHHHHHHhhhhh
Q 014484 216 ELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 216 ~l~~li~~cl~~dp~~Rps~~~vl~~l~~~~~~ 248 (423)
++.++|.+||+.||.+|||+.+++++|+.+...
T Consensus 272 ~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 304 (327)
T 3lxl_A 272 EVHELMKLCWAPSPQDRPSFSALGPQLDMLWSG 304 (327)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHC---
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence 999999999999999999999999999987654
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-42 Score=326.24 Aligned_cols=238 Identities=13% Similarity=0.211 Sum_probs=194.6
Q ss_pred CCCCccceeeee--cceeeeeecCCC----hhhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS----DLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||.+.+. +..+++|++... ......+.+|+.++..+ +||||+++++++.+.+..|+||||++||+|.+
T Consensus 20 G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~~gg~L~~ 99 (345)
T 3a8x_A 20 GSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMF 99 (345)
T ss_dssp CSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHHH
T ss_pred cCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCCCCCcHHH
Confidence 899999999885 667888877543 23456688999999988 89999999999999999999999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCC----CCccccCccc
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNLAF 150 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~~t~~y 150 (423)
++.+ .+.+++..+..++.||+.||.|||+++ |+||||||+|||++.+|++||+|||+++.... .....||+.|
T Consensus 100 ~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~~~~~~~gt~~y 176 (345)
T 3a8x_A 100 HMQR--QRKLPEEHARFYSAEISLALNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNY 176 (345)
T ss_dssp HHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTCCBCCCCSCGGG
T ss_pred HHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCHHHEEECCCCCEEEEeccccccccCCCCcccccCCCccc
Confidence 9964 356999999999999999999999999 99999999999999999999999999986432 2345789999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhh----hchhhhhccccccCCCChhHHHHHHHHHHHhcc
Q 014484 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIR----SKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (423)
Q Consensus 151 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (423)
+|||++.+..++.++|||||||++|||++|..||......... .......+. .....++..++.++.++|.+||+
T Consensus 177 ~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~-~~~~~~p~~~s~~~~~li~~lL~ 255 (345)
T 3a8x_A 177 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVIL-EKQIRIPRSLSVKAASVLKSFLN 255 (345)
T ss_dssp CCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHH-HCCCCCCTTSCHHHHHHHHHHTC
T ss_pred cCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHH-cCCCCCCCCCCHHHHHHHHHHhc
Confidence 9999999989999999999999999999999998642111000 001111111 11223566678899999999999
Q ss_pred cCcCCCCCH------HHHHHHHH
Q 014484 227 SEARERPNA------KSLVISLM 243 (423)
Q Consensus 227 ~dp~~Rps~------~~vl~~l~ 243 (423)
.||.+||++ +++++|..
T Consensus 256 ~dP~~R~~~~~~~~~~~i~~hp~ 278 (345)
T 3a8x_A 256 KDPKERLGCHPQTGFADIQGHPF 278 (345)
T ss_dssp SSTTTSTTCCTTTHHHHHHTSGG
T ss_pred CCHhHCCCCCCcCCHHHHhcCCc
Confidence 999999995 78877743
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-42 Score=347.84 Aligned_cols=240 Identities=23% Similarity=0.301 Sum_probs=203.1
Q ss_pred CCCCccceeeeec-ceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccCC
Q 014484 2 GGRCSKFSICWFH-CHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80 (423)
Q Consensus 2 G~~g~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~ 80 (423)
|+||.||.+.+.+ ..+++|++.......+.|.+|+++|++++||||+++++++.+ +..++||||+.+|+|.+++....
T Consensus 278 G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~gsL~~~l~~~~ 356 (535)
T 2h8h_A 278 GCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGET 356 (535)
T ss_dssp CSSEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTEEHHHHHSHHH
T ss_pred CCCeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcCCcHHHHHhhcC
Confidence 8999999999864 568888887766667889999999999999999999999876 66899999999999999996534
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-----CccccCcccCCccc
Q 014484 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYSTNLAFTPPEY 155 (423)
Q Consensus 81 ~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~~t~~y~aPE~ 155 (423)
+..+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....++..|+|||+
T Consensus 357 ~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~ 435 (535)
T 2h8h_A 357 GKYLRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 435 (535)
T ss_dssp HTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCSTTSCGGGSCHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecccCCcCcccccCHHH
Confidence 456999999999999999999999999 999999999999999999999999999866532 23346788999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCC
Q 014484 156 MRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (423)
Q Consensus 156 ~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (423)
+.+..++.++|||||||++|||++ |..||...... .+...+........+..++.++.+||.+||+.||++|||
T Consensus 436 ~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~-----~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt 510 (535)
T 2h8h_A 436 ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-----EVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPT 510 (535)
T ss_dssp HHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH-----HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred hccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcC
Confidence 998899999999999999999999 88887654221 122222223334456677889999999999999999999
Q ss_pred HHHHHHHHHhhhhh
Q 014484 235 AKSLVISLMSLQKE 248 (423)
Q Consensus 235 ~~~vl~~l~~~~~~ 248 (423)
+++|++.|+.+...
T Consensus 511 ~~~l~~~L~~~~~~ 524 (535)
T 2h8h_A 511 FEYLQAFLEDYFTS 524 (535)
T ss_dssp HHHHHHHHHTSSCC
T ss_pred HHHHHHHHHHHhhc
Confidence 99999999886543
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-42 Score=321.09 Aligned_cols=243 Identities=18% Similarity=0.259 Sum_probs=198.1
Q ss_pred CCCCccceeee------ecceeeeeecCCCh--hhHHHHHHHHHHHhcCCCCCccceEeEEEeC--CceeEEEecCCCCC
Q 014484 2 GGRCSKFSICW------FHCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEA--DERLLVAEFMPNET 71 (423)
Q Consensus 2 G~~g~v~~~~~------~~~~~~~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e~~~~~~ 71 (423)
|+||.||.+.+ .+..+++|++.... .....+.+|++++..++||||+++++++... ...++||||+++++
T Consensus 32 G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~ 111 (302)
T 4e5w_A 32 GHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGS 111 (302)
T ss_dssp CSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEEEEECCTTCB
T ss_pred CCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEEEEEeCCCCc
Confidence 89999999985 36778888876443 2357789999999999999999999999877 56899999999999
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-------Ccc
Q 014484 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-------KSY 144 (423)
Q Consensus 72 L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-------~~~ 144 (423)
|.+++.. ....+++..++.++.|++.||.|||+++ |+||||||+||+++.++.++|+|||++...... ...
T Consensus 112 L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~ 189 (302)
T 4e5w_A 112 LKEYLPK-NKNKINLKQQLKYAVQICKGMDYLGSRQ-YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDR 189 (302)
T ss_dssp HHHHHHH-HTTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCCEEECCCCT
T ss_pred HHHHHHh-ccccCCHHHHHHHHHHHHHHHHHhhcCC-cccCCCchheEEEcCCCCEEECcccccccccCCCcceeccCCC
Confidence 9999954 3456999999999999999999999999 999999999999999999999999999866543 234
Q ss_pred ccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHH----------hhhchhhhhccccccCCCChhHH
Q 014484 145 STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDL----------IRSKNFLLLMDSALEGHFSNDEG 214 (423)
Q Consensus 145 ~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~ 214 (423)
.+|..|+|||.+.+..++.++|||||||++|+|++|..|+....... ..................+..++
T Consensus 190 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (302)
T 4e5w_A 190 DSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCP 269 (302)
T ss_dssp TCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTCCCCCCTTCC
T ss_pred CCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhccCCCCCCCCCC
Confidence 56788999999998889999999999999999999987654321110 11112222223333444566778
Q ss_pred HHHHHHHHHhcccCcCCCCCHHHHHHHHHhhh
Q 014484 215 TELVRLASRCLQSEARERPNAKSLVISLMSLQ 246 (423)
Q Consensus 215 ~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~~ 246 (423)
+++.+++.+||+.||.+|||+.++++.|+.+.
T Consensus 270 ~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 270 DEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 89999999999999999999999999998764
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-41 Score=325.16 Aligned_cols=238 Identities=16% Similarity=0.119 Sum_probs=194.9
Q ss_pred CCCCccceeee--ecceeeeeecCCChhhHHHHHHHHHHHhcCC-----CCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNLR-----SERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~--~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||.+.+ .+..+++|++.........+..|+.++..+. ||||+++++++...+..++||||+ +++|.+
T Consensus 46 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~ 124 (360)
T 3llt_A 46 GTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPL-GPSLYE 124 (360)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEEECCC-CCBHHH
T ss_pred cCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEEEEcCC-CCCHHH
Confidence 89999999998 4677999998877777778889999999996 999999999999999999999999 889999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecC-------------------------CCCeEE
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK-------------------------DGNPRL 129 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~-------------------------~~~~kl 129 (423)
++.......+++..+..++.||+.||.|||+++ |+||||||+|||++. ++.+||
T Consensus 125 ~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl 203 (360)
T 3llt_A 125 IITRNNYNGFHIEDIKLYCIEILKALNYLRKMS-LTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKL 203 (360)
T ss_dssp HHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEE
T ss_pred HHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEE
Confidence 998655567999999999999999999999999 999999999999975 788999
Q ss_pred ccccccccCCCC-CccccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhcc------
Q 014484 130 SSFGLMKNSRDG-KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD------ 202 (423)
Q Consensus 130 ~Dfg~~~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~------ 202 (423)
+|||+++..... ....||+.|+|||++.+..++.++|||||||++|+|++|..||........... ......
T Consensus 204 ~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~-~~~~~~~~p~~~ 282 (360)
T 3llt_A 204 IDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAM-MESIIQPIPKNM 282 (360)
T ss_dssp CCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH-HHHHTCCCCHHH
T ss_pred EeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHH-HHHhcCCCCHHH
Confidence 999999865543 456789999999999999999999999999999999999998865421111000 000000
Q ss_pred ---------------ccccCCCC--------------------hhHHHHHHHHHHHhcccCcCCCCCHHHHHHHH
Q 014484 203 ---------------SALEGHFS--------------------NDEGTELVRLASRCLQSEARERPNAKSLVISL 242 (423)
Q Consensus 203 ---------------~~~~~~~~--------------------~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l 242 (423)
......++ ...++.+.+||.+||+.||.+|||++++++|.
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~hp 357 (360)
T 3llt_A 283 LYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHK 357 (360)
T ss_dssp HHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSG
T ss_pred HhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhcCc
Confidence 00000000 00126788999999999999999999999763
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-41 Score=315.08 Aligned_cols=239 Identities=21% Similarity=0.332 Sum_probs=195.1
Q ss_pred CCCCccceeeee--cceeeeeecCCChhh--------HHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLG--------ETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNET 71 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~--------~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 71 (423)
|+||.||.+.+. +..+++|++...... ...+.+|+.++..++||||+++++++.+.. ++||||+++++
T Consensus 30 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~lv~e~~~~~~ 107 (287)
T 4f0f_A 30 GGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--RMVMEFVPCGD 107 (287)
T ss_dssp CSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--EEEEECCTTCB
T ss_pred CCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--eEEEEecCCCC
Confidence 899999999984 677888877543321 167889999999999999999999986654 79999999999
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCC-eeeccCCCCCeeecCCCC-----eEEccccccccCCCC-Ccc
Q 014484 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGR-ALYHDLNAYRILFDKDGN-----PRLSSFGLMKNSRDG-KSY 144 (423)
Q Consensus 72 L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~-iiH~dlkp~Nill~~~~~-----~kl~Dfg~~~~~~~~-~~~ 144 (423)
|.+++.+ ....+++..++.++.|++.||.|||++++ ++||||||+||+++.++. ++|+|||+++..... ...
T Consensus 108 L~~~l~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~ 186 (287)
T 4f0f_A 108 LYHRLLD-KAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGL 186 (287)
T ss_dssp HHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCCSSCEECC
T ss_pred HHHHHhc-ccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCcccccccccccc
Confidence 9998864 44579999999999999999999999864 999999999999988776 999999999865544 345
Q ss_pred ccCcccCCccccc--cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHH
Q 014484 145 STNLAFTPPEYMR--TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLAS 222 (423)
Q Consensus 145 ~~t~~y~aPE~~~--~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 222 (423)
.||+.|+|||.+. ...++.++|||||||++|+|++|..||......... ..............+..+++++.+++.
T Consensus 187 ~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~li~ 264 (287)
T 4f0f_A 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIK--FINMIREEGLRPTIPEDCPPRLRNVIE 264 (287)
T ss_dssp CCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHH--HHHHHHHSCCCCCCCTTSCHHHHHHHH
T ss_pred CCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHH--HHHHHhccCCCCCCCcccCHHHHHHHH
Confidence 7899999999984 445788999999999999999999988654221111 112222233444566677889999999
Q ss_pred HhcccCcCCCCCHHHHHHHHHhh
Q 014484 223 RCLQSEARERPNAKSLVISLMSL 245 (423)
Q Consensus 223 ~cl~~dp~~Rps~~~vl~~l~~~ 245 (423)
+||+.||.+|||++++++.|+.+
T Consensus 265 ~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 265 LCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHTC
T ss_pred HHhcCChhhCcCHHHHHHHHHhC
Confidence 99999999999999999998753
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-42 Score=322.32 Aligned_cols=242 Identities=19% Similarity=0.227 Sum_probs=196.4
Q ss_pred CCCCccceeeeec--c--eeeeeecCC--ChhhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWFH--C--HLKSSVLES--SDLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~~--~--~~~~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||.+.+.. . .+++|.+.. .......+.+|++++.++ +||||+++++++.+.+..++||||+++++|.+
T Consensus 36 G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~ 115 (327)
T 1fvr_A 36 GNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD 115 (327)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHH
T ss_pred CCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEEecCCCCCHHH
Confidence 8999999998853 3 336666543 223455788999999999 99999999999999999999999999999999
Q ss_pred hhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCC
Q 014484 75 HLFHWE--------------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD 140 (423)
Q Consensus 75 ~i~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 140 (423)
++.... ...+++..++.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++....
T Consensus 116 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIl~~~~~~~kL~Dfg~~~~~~~ 194 (327)
T 1fvr_A 116 FLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNILVGENYVAKIADFGLSRGQEV 194 (327)
T ss_dssp HHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECGGGCEEECCTTCEESSCE
T ss_pred HHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCccceEEEcCCCeEEEcccCcCccccc
Confidence 996432 246999999999999999999999999 99999999999999999999999999875432
Q ss_pred ---CCccccCcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHH
Q 014484 141 ---GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTE 216 (423)
Q Consensus 141 ---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (423)
.....+++.|+|||.+.+..++.++|||||||++|+|++ |..||....... ....+........+..++++
T Consensus 195 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 269 (327)
T 1fvr_A 195 YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE-----LYEKLPQGYRLEKPLNCDDE 269 (327)
T ss_dssp ECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-----HHHHGGGTCCCCCCTTBCHH
T ss_pred cccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHH-----HHHHhhcCCCCCCCCCCCHH
Confidence 233456789999999998889999999999999999998 988886542221 22222222333455567889
Q ss_pred HHHHHHHhcccCcCCCCCHHHHHHHHHhhhhhc
Q 014484 217 LVRLASRCLQSEARERPNAKSLVISLMSLQKEA 249 (423)
Q Consensus 217 l~~li~~cl~~dp~~Rps~~~vl~~l~~~~~~~ 249 (423)
+.++|.+||+.||.+|||+++++++|..+....
T Consensus 270 l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 302 (327)
T 1fvr_A 270 VYDLMRQCWREKPYERPSFAQILVSLNRMLEER 302 (327)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999987653
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-42 Score=326.72 Aligned_cols=233 Identities=17% Similarity=0.253 Sum_probs=196.1
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||.+.+. +..+++|++.... .....+..|..++..+ +||||+++++++.+.+..|+||||++||+|.+
T Consensus 31 G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~ 110 (353)
T 2i0e_A 31 GSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMY 110 (353)
T ss_dssp ETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEECCCSCBHHH
T ss_pred CCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEeCCCCCcHHH
Confidence 899999999985 5678888876532 2355678999999988 89999999999999999999999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCC----CCccccCccc
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNLAF 150 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~~t~~y 150 (423)
++.. .+.+++..++.++.||+.||.|||++| |+||||||+|||++.+|++||+|||+++.... .....||+.|
T Consensus 111 ~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y 187 (353)
T 2i0e_A 111 HIQQ--VGRFKEPHAVFYAAEIAIGLFFLQSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTPDY 187 (353)
T ss_dssp HHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCSCGGG
T ss_pred HHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EEeccCCHHHEEEcCCCcEEEEeCCcccccccCCcccccccCCccc
Confidence 9964 356999999999999999999999999 99999999999999999999999999986432 2346789999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcC
Q 014484 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (423)
Q Consensus 151 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (423)
+|||++.+..++.++|||||||++|||++|..||........ ...+... ...++..+++++.++|.+||+.||.
T Consensus 188 ~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~----~~~i~~~--~~~~p~~~s~~~~~li~~lL~~dP~ 261 (353)
T 2i0e_A 188 IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL----FQSIMEH--NVAYPKSMSKEAVAICKGLMTKHPG 261 (353)
T ss_dssp CCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHC--CCCCCTTSCHHHHHHHHHHTCSCTT
T ss_pred cChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHH----HHHHHhC--CCCCCCCCCHHHHHHHHHHhhcCHH
Confidence 999999999999999999999999999999999876532221 1122221 2235567788999999999999999
Q ss_pred CCCC-----HHHHHHHHH
Q 014484 231 ERPN-----AKSLVISLM 243 (423)
Q Consensus 231 ~Rps-----~~~vl~~l~ 243 (423)
+||+ ++++++|..
T Consensus 262 ~R~~~~~~~~~~i~~h~~ 279 (353)
T 2i0e_A 262 KRLGCGPEGERDIKEHAF 279 (353)
T ss_dssp SCTTCSTTHHHHHHTSGG
T ss_pred HcCCCCCCCHHHHhcCcc
Confidence 9995 588887743
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-42 Score=323.25 Aligned_cols=234 Identities=17% Similarity=0.213 Sum_probs=188.8
Q ss_pred CCCCccceeee-----ecceeeeeecCCCh-----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCC
Q 014484 2 GGRCSKFSICW-----FHCHLKSSVLESSD-----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNET 71 (423)
Q Consensus 2 G~~g~v~~~~~-----~~~~~~~~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 71 (423)
|+||.||.+.. .+..+++|++.... .....+.+|+.+++.++||||+++++++..++..|+||||++|++
T Consensus 28 G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~ 107 (327)
T 3a62_A 28 GGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGE 107 (327)
T ss_dssp ETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCEEEEEECCTTEE
T ss_pred CCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEEEEEEeCCCCCc
Confidence 89999999886 36778888876542 234567889999999999999999999999999999999999999
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccC
Q 014484 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTN 147 (423)
Q Consensus 72 L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t 147 (423)
|.+++.. .+.+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++..... ....||
T Consensus 108 L~~~l~~--~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt 184 (327)
T 3a62_A 108 LFMQLER--EGIFMEDTACFYLAEISMALGHLHQKG-IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGT 184 (327)
T ss_dssp HHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCTTTEEECTTSCEEECCCSCC----------CTTSSC
T ss_pred HHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhCC-EEcccCCHHHeEECCCCcEEEEeCCcccccccCCccccccCCC
Confidence 9999964 456899999999999999999999999 999999999999999999999999998754322 345689
Q ss_pred cccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhccc
Q 014484 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQS 227 (423)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 227 (423)
+.|+|||.+.+..++.++|||||||++|+|++|..||......... ..+... ...++..++.++.++|.+||+.
T Consensus 185 ~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~----~~i~~~--~~~~p~~~~~~~~~li~~~L~~ 258 (327)
T 3a62_A 185 IEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTI----DKILKC--KLNLPPYLTQEARDLLKKLLKR 258 (327)
T ss_dssp CTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH----HHHHHT--CCCCCTTSCHHHHHHHHHHSCS
T ss_pred cCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHH----HHHHhC--CCCCCCCCCHHHHHHHHHHHhc
Confidence 9999999999888999999999999999999999998765322211 111111 1234556778999999999999
Q ss_pred CcCCCC-----CHHHHHHHHHh
Q 014484 228 EARERP-----NAKSLVISLMS 244 (423)
Q Consensus 228 dp~~Rp-----s~~~vl~~l~~ 244 (423)
||.+|| +++++++|..-
T Consensus 259 dp~~R~~~~~~~~~e~l~hp~f 280 (327)
T 3a62_A 259 NAASRLGAGPGDAGEVQAHPFF 280 (327)
T ss_dssp CGGGSTTSSTTTHHHHHHSGGG
T ss_pred CHhhccCCCCCCHHHHHcCCcc
Confidence 999999 88899988543
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-42 Score=325.41 Aligned_cols=239 Identities=16% Similarity=0.273 Sum_probs=193.1
Q ss_pred CCCCccceeeee--cce----eeeeecCC--ChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHH
Q 014484 2 GGRCSKFSICWF--HCH----LKSSVLES--SDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLA 73 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~----~~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 73 (423)
|+||.||++.+. +.. +++|.+.. .......+.+|+.++..++||||+++++++..+. .++||||+.+|+|.
T Consensus 26 G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~v~~~~~~g~L~ 104 (327)
T 3lzb_A 26 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLL 104 (327)
T ss_dssp CSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEEEECCCSSCBHH
T ss_pred CCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceEEEEecCCCcHH
Confidence 899999999874 333 34444432 2335678899999999999999999999998765 78999999999999
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC------ccccC
Q 014484 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK------SYSTN 147 (423)
Q Consensus 74 ~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~------~~~~t 147 (423)
+++.. ....+++..++.++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++...... ...+|
T Consensus 105 ~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~t 182 (327)
T 3lzb_A 105 DYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDRR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182 (327)
T ss_dssp HHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEETTEEEECCTTC----------------CCC
T ss_pred HHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhCC-CcCCCCCHHHEEEcCCCCEEEccCcceeEccCccccccccCCCcc
Confidence 99965 3456999999999999999999999999 9999999999999999999999999998654322 23457
Q ss_pred cccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcc
Q 014484 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (423)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (423)
+.|+|||.+.+..++.++|||||||++|+|++ |..||.... .......+........+..++.++.+++.+||+
T Consensus 183 ~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~ 257 (327)
T 3lzb_A 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP-----ASEISSILEKGERLPQPPICTIDVYMIMRKCWM 257 (327)
T ss_dssp GGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-----GGGHHHHHHTTCCCCCCTTBCHHHHHHHHHHTC
T ss_pred ccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCC-----HHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcC
Confidence 78999999999999999999999999999999 888876542 222233333333444566678899999999999
Q ss_pred cCcCCCCCHHHHHHHHHhhhhh
Q 014484 227 SEARERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 227 ~dp~~Rps~~~vl~~l~~~~~~ 248 (423)
.||.+|||+.++++.|..+...
T Consensus 258 ~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 258 IDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp SSGGGSCCHHHHHHHHHHHHTS
T ss_pred CChhHCcCHHHHHHHHHHHHhC
Confidence 9999999999999999998765
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-42 Score=326.99 Aligned_cols=236 Identities=16% Similarity=0.159 Sum_probs=181.2
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW 79 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~ 79 (423)
|+||.||.+.+. +..+++|++.... ..+.+.+|+.++..++||||+++++++...+..++||||++|++|.+++..
T Consensus 64 G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~- 141 (349)
T 2w4o_A 64 GATSIVYRCKQKGTQKPYALKVLKKTV-DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVE- 141 (349)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEEEC-----------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHTT-
T ss_pred CCCEEEEEEEECCCCcEEEEEEeccch-hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCCCCHHHHHHh-
Confidence 899999999985 5668888876543 446788999999999999999999999999999999999999999999954
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecC---CCCeEEccccccccCCCC---CccccCcccCCc
Q 014484 80 ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK---DGNPRLSSFGLMKNSRDG---KSYSTNLAFTPP 153 (423)
Q Consensus 80 ~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~---~~~~kl~Dfg~~~~~~~~---~~~~~t~~y~aP 153 (423)
.+.+++..++.++.|++.||.|||+++ |+||||||+|||++. ++.+||+|||+++..... ....||+.|+||
T Consensus 142 -~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aP 219 (349)
T 2w4o_A 142 -KGYYSERDAADAVKQILEAVAYLHENG-IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAP 219 (349)
T ss_dssp -CSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEESSSSTTCCEEECCCC----------------CGGGSCH
T ss_pred -cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCcccEEEecCCCCCCEEEccCccccccCcccccccccCCCCccCH
Confidence 456999999999999999999999999 999999999999975 789999999998865543 345689999999
Q ss_pred cccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCC
Q 014484 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERP 233 (423)
Q Consensus 154 E~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 233 (423)
|++.+..++.++|||||||++|+|++|..||............+... ...........++.++.++|.+||+.||++||
T Consensus 220 E~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp 298 (349)
T 2w4o_A 220 EILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNC-EYYFISPWWDEVSLNAKDLVRKLIVLDPKKRL 298 (349)
T ss_dssp HHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTT-CCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSC
T ss_pred HHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhC-CCccCCchhhhCCHHHHHHHHHHccCChhhCc
Confidence 99998899999999999999999999999986543221111111111 11111223345678899999999999999999
Q ss_pred CHHHHHHHH
Q 014484 234 NAKSLVISL 242 (423)
Q Consensus 234 s~~~vl~~l 242 (423)
|+.++++|.
T Consensus 299 t~~e~l~hp 307 (349)
T 2w4o_A 299 TTFQALQHP 307 (349)
T ss_dssp CHHHHHHST
T ss_pred CHHHHhcCc
Confidence 999999873
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-42 Score=347.18 Aligned_cols=239 Identities=18% Similarity=0.244 Sum_probs=199.5
Q ss_pred CCCCccceeeee----cceeeeeecCCC--hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF----HCHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~----~~~~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||++.+. +..+++|++... ....+.+.+|++++.+++|||||+++++|.. +..++||||+.+|+|.++
T Consensus 347 G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~L~~~ 425 (613)
T 2ozo_A 347 GNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKF 425 (613)
T ss_dssp CSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCBHHHH
T ss_pred CCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCcHHHH
Confidence 899999999874 455888887653 2356789999999999999999999999976 568999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC-------ccccCc
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-------SYSTNL 148 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-------~~~~t~ 148 (423)
+.. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++...... ...+|+
T Consensus 426 l~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~-iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~ 503 (613)
T 2ozo_A 426 LVG-KREEIPVSNVAELLHQVSMGMKYLEEKN-FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPL 503 (613)
T ss_dssp HTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCCSTTTTCC--------------CC
T ss_pred Hhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-EEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccCCCCcc
Confidence 964 3556999999999999999999999999 9999999999999999999999999998764322 123467
Q ss_pred ccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhccc
Q 014484 149 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQS 227 (423)
Q Consensus 149 ~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 227 (423)
.|+|||++.+..++.++|||||||++|||++ |..||..... ..+...+........+..+++++.+++.+||+.
T Consensus 504 ~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~-----~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~ 578 (613)
T 2ozo_A 504 KWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG-----PEVMAFIEQGKRMECPPECPPELYALMSDCWIY 578 (613)
T ss_dssp TTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCS-----HHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCS
T ss_pred ceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCH-----HHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCC
Confidence 8999999998999999999999999999998 9988876422 222233333334456667889999999999999
Q ss_pred CcCCCCCHHHHHHHHHhhhhh
Q 014484 228 EARERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 228 dp~~Rps~~~vl~~l~~~~~~ 248 (423)
||.+|||+.++++.|..+...
T Consensus 579 dP~~RPs~~~l~~~L~~~~~~ 599 (613)
T 2ozo_A 579 KWEDRPDFLTVEQRMRACYYS 599 (613)
T ss_dssp STTTSCCHHHHHHHHHHHHHH
T ss_pred ChhHCcCHHHHHHHHHHHHHH
Confidence 999999999999999887655
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-42 Score=331.07 Aligned_cols=252 Identities=15% Similarity=0.130 Sum_probs=195.2
Q ss_pred CCCCccceeeee-------cceeeeeecCCChhh------------HHHHHHHHHHHhcCCCCCccceEeEEEeC----C
Q 014484 2 GGRCSKFSICWF-------HCHLKSSVLESSDLG------------ETLNLEEAKAVGNLRSERLANLIGCCYEA----D 58 (423)
Q Consensus 2 G~~g~v~~~~~~-------~~~~~~~~~~~~~~~------------~~~~~~E~~~l~~l~h~niv~~~~~~~~~----~ 58 (423)
|+||.||++.+. +..+++|++...... ...+..|+..+..++||||+++++++... .
T Consensus 46 G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~ 125 (364)
T 3op5_A 46 GGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHDKNGKS 125 (364)
T ss_dssp C-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEEEEEEETTEE
T ss_pred CCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEeeeeeccCCcc
Confidence 899999999874 256777876554321 11234566677788899999999999875 3
Q ss_pred ceeEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeec--CCCCeEEccccccc
Q 014484 59 ERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFD--KDGNPRLSSFGLMK 136 (423)
Q Consensus 59 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~--~~~~~kl~Dfg~~~ 136 (423)
..++||||+ |++|.+++.. .++.+++..++.++.||+.||.|||+++ |+||||||+|||++ .++.+||+|||+++
T Consensus 126 ~~~lv~e~~-g~~L~~~~~~-~~~~l~~~~~~~i~~qi~~~l~~lH~~~-iiHrDlkp~Nill~~~~~~~~kl~DFG~a~ 202 (364)
T 3op5_A 126 YRFMIMDRF-GSDLQKIYEA-NAKRFSRKTVLQLSLRILDILEYIHEHE-YVHGDIKASNLLLNYKNPDQVYLVDYGLAY 202 (364)
T ss_dssp EEEEEEECE-EEEHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEESSCTTCEEECCCTTCE
T ss_pred eEEEEEeCC-CCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eEEecCCHHHEEEecCCCCeEEEEECCcce
Confidence 479999999 9999999965 3467999999999999999999999999 99999999999998 88999999999997
Q ss_pred cCCCC-----------CccccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhh--------chh
Q 014484 137 NSRDG-----------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRS--------KNF 197 (423)
Q Consensus 137 ~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~--------~~~ 197 (423)
..... ....||+.|+|||++.+..++.++|||||||++|||+||..||.......... ...
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~ 282 (364)
T 3op5_A 203 RYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENI 282 (364)
T ss_dssp ESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHCH
T ss_pred ecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHHHHHHHHhhhhH
Confidence 54322 23348999999999998899999999999999999999999987532111110 011
Q ss_pred hhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhhhccCChhhhhcC
Q 014484 198 LLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEVPSYVLLGI 259 (423)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~~~~~~~~~~~~~~~ 259 (423)
....+..+ ....+++++.+++.+||+.||.+|||+.++++.|..+............++
T Consensus 283 ~~~~~~~~---~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~~~~~~~dw 341 (364)
T 3op5_A 283 ASLMDKCF---PAANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSKDDGKLDL 341 (364)
T ss_dssp HHHHHHHS---CTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCCCCCCCC
T ss_pred HHHHHHhc---ccccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCcCCccce
Confidence 11111111 113446789999999999999999999999999999887655544444444
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-42 Score=317.00 Aligned_cols=238 Identities=16% Similarity=0.212 Sum_probs=189.4
Q ss_pred CCCCccceeeee-cceeeeeecCCChhh---HHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhc
Q 014484 2 GGRCSKFSICWF-HCHLKSSVLESSDLG---ETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (423)
Q Consensus 2 G~~g~v~~~~~~-~~~~~~~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~ 77 (423)
|+||.||.+.+. +..+++|.+...... ...+.+|+++++.++||||+++++++...+..++||||+.+ +|.+++.
T Consensus 13 G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~ 91 (288)
T 1ob3_A 13 GTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLD 91 (288)
T ss_dssp ETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSE-EHHHHHH
T ss_pred CCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecCC-CHHHHHH
Confidence 899999999874 677888877544322 46788999999999999999999999999999999999986 9999886
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccCCc
Q 014484 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPP 153 (423)
Q Consensus 78 ~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~aP 153 (423)
. ..+.+++..+..++.|++.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....+|+.|+||
T Consensus 92 ~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aP 169 (288)
T 1ob3_A 92 V-CEGGLESVTAKSFLLQLLNGIAYCHDRR-VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAP 169 (288)
T ss_dssp T-STTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---------CCCTTCCH
T ss_pred h-cccCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCCEEEeECccccccCccccccccccccccccCc
Confidence 4 3457999999999999999999999999 999999999999999999999999998765432 334679999999
Q ss_pred cccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhcc----------------ccc-------cCCC
Q 014484 154 EYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD----------------SAL-------EGHF 209 (423)
Q Consensus 154 E~~~~~-~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~----------------~~~-------~~~~ 209 (423)
|++.+. .++.++|||||||++|+|++|..||.................. ... ....
T Consensus 170 E~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (288)
T 1ob3_A 170 DVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESF 249 (288)
T ss_dssp HHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGT
T ss_pred hheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccccccccccCccHHHH
Confidence 998764 5899999999999999999999988764322111111100000 000 0011
Q ss_pred ChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHH
Q 014484 210 SNDEGTELVRLASRCLQSEARERPNAKSLVISL 242 (423)
Q Consensus 210 ~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l 242 (423)
...+++++.++|.+||+.||++|||++++++|.
T Consensus 250 ~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp 282 (288)
T 1ob3_A 250 LKGLDESGIDLLSKMLKLDPNQRITAKQALEHA 282 (288)
T ss_dssp CCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSG
T ss_pred hhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCc
Confidence 234578899999999999999999999999874
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-42 Score=317.35 Aligned_cols=238 Identities=18% Similarity=0.252 Sum_probs=197.2
Q ss_pred CCCCccceeeee----cceeeeeecCCCh---hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF----HCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~----~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||.+.+. +..+++|++.... .....+.+|++++..++||||+++++++ ..+..++||||+++++|.+
T Consensus 28 G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~~L~~ 106 (291)
T 1xbb_A 28 GNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNK 106 (291)
T ss_dssp CSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEEEECCTTEEHHH
T ss_pred ccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEEEEeCCCCCHHH
Confidence 899999999763 4667778776543 2356789999999999999999999999 5667899999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCCc-------cccC
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS-------YSTN 147 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-------~~~t 147 (423)
++.. .+.+++..++.++.|++.||.|||+++ ++||||||+||+++.++.++|+|||++........ ..++
T Consensus 107 ~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~ 183 (291)
T 1xbb_A 107 YLQQ--NRHVKDKNIIELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 183 (291)
T ss_dssp HHHH--CTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----CCC
T ss_pred HHHh--CcCCCHHHHHHHHHHHHHHHHHHHhCC-eEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCcccccccCCCC
Confidence 9964 456999999999999999999999999 99999999999999999999999999986654322 2356
Q ss_pred cccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcc
Q 014484 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (423)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (423)
+.|+|||.+.+..++.++||||||+++|+|++ |..||...... .....+........+..+++++.+++.+||+
T Consensus 184 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~ 258 (291)
T 1xbb_A 184 VKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS-----EVTAMLEKGERMGCPAGCPREMYDLMNLCWT 258 (291)
T ss_dssp GGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-----HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTC
T ss_pred ceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH-----HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcC
Confidence 88999999998889999999999999999999 98887654222 1222222223344556678899999999999
Q ss_pred cCcCCCCCHHHHHHHHHhhhhh
Q 014484 227 SEARERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 227 ~dp~~Rps~~~vl~~l~~~~~~ 248 (423)
.||.+|||+.++++.|+.+...
T Consensus 259 ~dp~~Rps~~~l~~~L~~~~~~ 280 (291)
T 1xbb_A 259 YDVENRPGFAAVELRLRNYYYD 280 (291)
T ss_dssp SSTTTSCCHHHHHHHHHHHHHH
T ss_pred CChhhCcCHHHHHHHHHHHHHH
Confidence 9999999999999999987654
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-41 Score=317.85 Aligned_cols=241 Identities=19% Similarity=0.244 Sum_probs=189.6
Q ss_pred CCCCccceeeeec-----ceeeeeecCCC---hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCc-----eeEEEecCC
Q 014484 2 GGRCSKFSICWFH-----CHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEADE-----RLLVAEFMP 68 (423)
Q Consensus 2 G~~g~v~~~~~~~-----~~~~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-----~~lv~e~~~ 68 (423)
|+||.||.+.+.. ..+++|.+... ......+.+|+.++..++||||+++++++...+. .++||||++
T Consensus 45 G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~v~e~~~ 124 (313)
T 3brb_A 45 GEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMK 124 (313)
T ss_dssp -CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------CEEEEEECCT
T ss_pred cCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcccEEEEeccc
Confidence 8999999998752 35777877543 3345678999999999999999999999987653 499999999
Q ss_pred CCCHHhhhcc----CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC---
Q 014484 69 NETLAKHLFH----WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--- 141 (423)
Q Consensus 69 ~~~L~~~i~~----~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--- 141 (423)
+++|.+++.. .....+++..++.++.|++.||.|||+++ |+||||||+||+++.++.+||+|||+++.....
T Consensus 125 ~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~ 203 (313)
T 3brb_A 125 YGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN-FLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYY 203 (313)
T ss_dssp TCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT-CCCCCCSGGGEEECTTSCEEECSCSCC---------
T ss_pred CCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCcceEEEcCCCcEEEeecCcceeccccccc
Confidence 9999999842 23457999999999999999999999999 999999999999999999999999998765432
Q ss_pred ---CccccCcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHH
Q 014484 142 ---KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTEL 217 (423)
Q Consensus 142 ---~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 217 (423)
....+++.|+|||.+.+..++.++|||||||++|+|++ |..||...... ..............+..+++++
T Consensus 204 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l 278 (313)
T 3brb_A 204 RQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH-----EMYDYLLHGHRLKQPEDCLDEL 278 (313)
T ss_dssp -------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-----GHHHHHHTTCCCCCBTTCCHHH
T ss_pred CcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH-----HHHHHHHcCCCCCCCccccHHH
Confidence 23346788999999998899999999999999999999 77776653211 1111122222334455677899
Q ss_pred HHHHHHhcccCcCCCCCHHHHHHHHHhhhhh
Q 014484 218 VRLASRCLQSEARERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 218 ~~li~~cl~~dp~~Rps~~~vl~~l~~~~~~ 248 (423)
.+++.+||+.||.+|||+.+++++|..+...
T Consensus 279 ~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~ 309 (313)
T 3brb_A 279 YEIMYSCWRTDPLDRPTFSVLRLQLEKLLES 309 (313)
T ss_dssp HHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 9999999999999999999999999998765
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-42 Score=323.77 Aligned_cols=240 Identities=16% Similarity=0.217 Sum_probs=197.6
Q ss_pred CCCCccceeeee-------cceeeeeecCCCh--hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICWF-------HCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~~-------~~~~~~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 72 (423)
|+||.||.+.+. +..+++|.+.... .....+.+|+++++.++||||+++++++.+++..++||||+++++|
T Consensus 36 G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 115 (322)
T 1p4o_A 36 GSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDL 115 (322)
T ss_dssp CSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEEECCTTCBH
T ss_pred CCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccEEEEEeCCCCcH
Confidence 899999999875 4567778775433 3455788999999999999999999999999999999999999999
Q ss_pred HhhhccCC--------CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC---
Q 014484 73 AKHLFHWE--------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--- 141 (423)
Q Consensus 73 ~~~i~~~~--------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--- 141 (423)
.+++.... ...+++..++.++.|++.||.|||+++ |+||||||+||+++.++.+||+|||+++.....
T Consensus 116 ~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~ 194 (322)
T 1p4o_A 116 KSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 194 (322)
T ss_dssp HHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGCE
T ss_pred HHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC-CccCCCccceEEEcCCCeEEECcCcccccccccccc
Confidence 99986321 145799999999999999999999999 999999999999999999999999998755432
Q ss_pred ---CccccCcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHH
Q 014484 142 ---KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTEL 217 (423)
Q Consensus 142 ---~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 217 (423)
....+|+.|+|||.+.+..++.++|||||||++|+|++ |..||....... ....+........+..++.++
T Consensus 195 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l 269 (322)
T 1p4o_A 195 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ-----VLRFVMEGGLLDKPDNCPDML 269 (322)
T ss_dssp EGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHH-----HHHHHHTTCCCCCCTTCCHHH
T ss_pred ccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHH-----HHHHHHcCCcCCCCCCCCHHH
Confidence 22345788999999998899999999999999999999 777765532221 111111122233455677889
Q ss_pred HHHHHHhcccCcCCCCCHHHHHHHHHhhhh
Q 014484 218 VRLASRCLQSEARERPNAKSLVISLMSLQK 247 (423)
Q Consensus 218 ~~li~~cl~~dp~~Rps~~~vl~~l~~~~~ 247 (423)
.+++.+||+.||.+|||+.+++++|.....
T Consensus 270 ~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 270 FELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred HHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 999999999999999999999999988654
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-42 Score=335.36 Aligned_cols=234 Identities=16% Similarity=0.196 Sum_probs=197.9
Q ss_pred CCCCccceeeee--cceeeeeecCCChh----hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDL----GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.+. +..+++|++..... ....+.+|+.+++.++||||+++++++...+..++||||++||+|.++
T Consensus 27 G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~ 106 (476)
T 2y94_A 27 GTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDY 106 (476)
T ss_dssp CSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSSEEHHHH
T ss_pred CCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHH
Confidence 899999999875 77888888765432 245788999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC---CccccCcccCC
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTP 152 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~~t~~y~a 152 (423)
+.. .+.+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....||+.|+|
T Consensus 107 l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~a 183 (476)
T 2y94_A 107 ICK--NGRLDEKESRRLFQQILSGVDYCHRHM-VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAA 183 (476)
T ss_dssp TTS--SSSCCHHHHHHHHHHHHHHHHHHHTTT-EECSCCSGGGEEECTTCCEEECCCSSCEECCTTCCBCCCCSCSTTCC
T ss_pred HHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CCcccccHHHEEEecCCCeEEEeccchhhccccccccccCCCcCeEC
Confidence 953 567999999999999999999999999 999999999999999999999999999876543 34578999999
Q ss_pred ccccccCCC-CCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCC
Q 014484 153 PEYMRTGRV-TPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARE 231 (423)
Q Consensus 153 PE~~~~~~~-~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (423)
||++.+..+ +.++|||||||++|+|++|..||........ ...+... ....+..+++++.++|.+||+.||.+
T Consensus 184 PE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~----~~~i~~~--~~~~p~~~s~~~~~Li~~~L~~dP~~ 257 (476)
T 2y94_A 184 PEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTL----FKKICDG--IFYTPQYLNPSVISLLKHMLQVDPMK 257 (476)
T ss_dssp HHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHH----HHHHHTT--CCCCCTTCCHHHHHHHHHHTCSSTTT
T ss_pred hhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHH----HHHHhcC--CcCCCccCCHHHHHHHHHHcCCCchh
Confidence 999988765 6899999999999999999999876432211 1111111 11234456788999999999999999
Q ss_pred CCCHHHHHHHHHh
Q 014484 232 RPNAKSLVISLMS 244 (423)
Q Consensus 232 Rps~~~vl~~l~~ 244 (423)
|||++++++|.+-
T Consensus 258 Rpt~~eil~hp~~ 270 (476)
T 2y94_A 258 RATIKDIREHEWF 270 (476)
T ss_dssp SCCHHHHHTCHHH
T ss_pred CcCHHHHHhCHHh
Confidence 9999999988554
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-42 Score=326.84 Aligned_cols=242 Identities=19% Similarity=0.287 Sum_probs=198.5
Q ss_pred CCCCccceeeeec-------ceeeeeecCCCh--hhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCCC
Q 014484 2 GGRCSKFSICWFH-------CHLKSSVLESSD--LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNET 71 (423)
Q Consensus 2 G~~g~v~~~~~~~-------~~~~~~~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 71 (423)
|+||.||.+.+.+ ..+++|.+.... .....+.+|+.++..+ +||||+++++++..++..++||||+++|+
T Consensus 57 G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~ 136 (333)
T 2i1m_A 57 GAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 136 (333)
T ss_dssp CSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEE
T ss_pred CCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEEEecCCCCc
Confidence 8999999998742 257777765543 3466789999999999 89999999999999999999999999999
Q ss_pred HHhhhccCC------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCC
Q 014484 72 LAKHLFHWE------------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSR 139 (423)
Q Consensus 72 L~~~i~~~~------------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 139 (423)
|.+++.... ...+++..++.++.|++.||.|||+++ |+||||||+||+++.++.++|+|||+++...
T Consensus 137 L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 215 (333)
T 2i1m_A 137 LLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN-CIHRDVAARNVLLTNGHVAKIGDFGLARDIM 215 (333)
T ss_dssp HHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGCEEEGGGEEEBCCCGGGCCGG
T ss_pred HHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC-cccCCcccceEEECCCCeEEECccccccccc
Confidence 999986421 346899999999999999999999999 9999999999999999999999999997554
Q ss_pred CC------CccccCcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChh
Q 014484 140 DG------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 212 (423)
Q Consensus 140 ~~------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (423)
.. ....+|+.|+|||.+.+..++.++|||||||++|+|+| |..||...... ...............+..
T Consensus 216 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~ 291 (333)
T 2i1m_A 216 NDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVN----SKFYKLVKDGYQMAQPAF 291 (333)
T ss_dssp GCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSS----HHHHHHHHHTCCCCCCTT
T ss_pred cccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchh----HHHHHHHhcCCCCCCCCC
Confidence 32 22345778999999998899999999999999999998 77777653211 112222222233334555
Q ss_pred HHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhhh
Q 014484 213 EGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 213 ~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~~~~ 248 (423)
+++++.+++.+||+.||.+|||+.+++++|+.+...
T Consensus 292 ~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 327 (333)
T 2i1m_A 292 APKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE 327 (333)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHh
Confidence 678899999999999999999999999999887643
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-42 Score=336.16 Aligned_cols=240 Identities=16% Similarity=0.121 Sum_probs=195.4
Q ss_pred CCCCccceeeee--cceeeeeecCCChh----hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDL----GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.+. +..+++|++.+... ....+.+|+.++..++||||++++++|.+++..|+||||++||+|.++
T Consensus 85 G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey~~gg~L~~~ 164 (437)
T 4aw2_A 85 GAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTL 164 (437)
T ss_dssp CSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCTTCBHHHH
T ss_pred CCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEecCCCCcHHHH
Confidence 899999999985 56788888754322 223488999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-----CccccCccc
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYSTNLAF 150 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~~t~~y 150 (423)
+.+ ..+.+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++..... ....||+.|
T Consensus 165 l~~-~~~~l~e~~~~~~~~qi~~aL~~LH~~g-iiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~~~~~~~~GT~~Y 242 (437)
T 4aw2_A 165 LSK-FEDRLPEEMARFYLAEMVIAIDSVHQLH-YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDY 242 (437)
T ss_dssp HHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEECCSCCSCGGG
T ss_pred HHH-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-eEecccCHHHeeEcCCCCEEEcchhhhhhcccCCCcccccccCCcCe
Confidence 964 3457999999999999999999999999 999999999999999999999999999765443 235789999
Q ss_pred CCccccc-----cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhc
Q 014484 151 TPPEYMR-----TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCL 225 (423)
Q Consensus 151 ~aPE~~~-----~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 225 (423)
+|||++. ...++.++|||||||++|||++|..||................. ....+.....+++++.+||.+||
T Consensus 243 ~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~-~~~~p~~~~~~s~~~~dLi~~lL 321 (437)
T 4aw2_A 243 ISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKE-RFQFPTQVTDVSENAKDLIRRLI 321 (437)
T ss_dssp CCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHH-HCCCCSSCCCSCHHHHHHHHTTS
T ss_pred eChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccc-cccCCcccccCCHHHHHHHHHHh
Confidence 9999987 45689999999999999999999999876532222111111100 01111122346789999999999
Q ss_pred ccCcCC--CCCHHHHHHHHHh
Q 014484 226 QSEARE--RPNAKSLVISLMS 244 (423)
Q Consensus 226 ~~dp~~--Rps~~~vl~~l~~ 244 (423)
..+|++ ||+++++++|..-
T Consensus 322 ~~~~~r~~r~~~~eil~Hpff 342 (437)
T 4aw2_A 322 CSREHRLGQNGIEDFKKHPFF 342 (437)
T ss_dssp SCGGGCTTTTTTHHHHTSGGG
T ss_pred cccccccCCCCHHHHhCCCcc
Confidence 998888 9999999988644
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-42 Score=320.94 Aligned_cols=230 Identities=17% Similarity=0.158 Sum_probs=186.0
Q ss_pred CCCCccceeeee--cceeeeeecCCCh---hhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD---LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||++.+. +..+++|++.... .....+..|+..+..+ +||||++++++|.+++..++||||+ +++|.++
T Consensus 68 G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e~~-~~~L~~~ 146 (311)
T 3p1a_A 68 GSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC-GPSLQQH 146 (311)
T ss_dssp ETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC-CCBHHHH
T ss_pred CCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEecc-CCCHHHH
Confidence 899999999985 7788888765432 3344556677666666 8999999999999999999999999 6699998
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC---CccccCcccCC
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTP 152 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~~t~~y~a 152 (423)
+.. .+..+++..++.++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....||+.|+|
T Consensus 147 ~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~a 224 (311)
T 3p1a_A 147 CEA-WGASLPEAQVWGYLRDTLLALAHLHSQG-LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMA 224 (311)
T ss_dssp HHH-HCSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECGGGCEEECCCTTCEECC------CCCCCGGGCC
T ss_pred HHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEECCCCCEEEccceeeeecccCCCCcccCCCccccC
Confidence 865 3456999999999999999999999999 999999999999999999999999998766543 33468999999
Q ss_pred ccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCC
Q 014484 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (423)
Q Consensus 153 PE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (423)
||++.+ .++.++|||||||++|||++|..+|..... ............++..+++++.++|.+||+.||++|
T Consensus 225 PE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R 296 (311)
T 3p1a_A 225 PELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG-------WQQLRQGYLPPEFTAGLSSELRSVLVMMLEPDPKLR 296 (311)
T ss_dssp GGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH-------HHHHTTTCCCHHHHTTSCHHHHHHHHHHSCSSTTTS
T ss_pred HhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH-------HHHHhccCCCcccccCCCHHHHHHHHHHcCCChhhC
Confidence 999875 799999999999999999999876654311 111111111112223456789999999999999999
Q ss_pred CCHHHHHHHH
Q 014484 233 PNAKSLVISL 242 (423)
Q Consensus 233 ps~~~vl~~l 242 (423)
||++++++|.
T Consensus 297 pt~~ell~hp 306 (311)
T 3p1a_A 297 ATAEALLALP 306 (311)
T ss_dssp CCHHHHHTSG
T ss_pred cCHHHHHhCc
Confidence 9999999874
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-42 Score=316.87 Aligned_cols=232 Identities=15% Similarity=0.175 Sum_probs=194.5
Q ss_pred CCCCccceeeee--cceeeeeecCCC---hhhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS---DLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.+. +..+++|++... ......+.+|+..+..+ +||||+++++++.+++..++||||++|++|.++
T Consensus 22 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 101 (289)
T 1x8b_A 22 GEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADA 101 (289)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEECCTTCBHHHH
T ss_pred CCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEecCCCcHHHH
Confidence 899999999985 778888887643 33466788999999999 999999999999999999999999999999999
Q ss_pred hccCC--CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCC-------------------CCeEEccccc
Q 014484 76 LFHWE--TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKD-------------------GNPRLSSFGL 134 (423)
Q Consensus 76 i~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~-------------------~~~kl~Dfg~ 134 (423)
+.... ...+++..++.++.||+.||.|||+++ |+||||||+||+++.+ +.++|+|||+
T Consensus 102 l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~ 180 (289)
T 1x8b_A 102 ISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS-LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGH 180 (289)
T ss_dssp HHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEC--------------------CCCEEECCCTT
T ss_pred HHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCC-EeecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEccccc
Confidence 96421 256999999999999999999999999 9999999999999844 4799999999
Q ss_pred cccCCCCCccccCcccCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhH
Q 014484 135 MKNSRDGKSYSTNLAFTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDE 213 (423)
Q Consensus 135 ~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (423)
+..........+|+.|+|||.+.+. .++.++|||||||++|+|++|.+++..... .... ........+..+
T Consensus 181 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~-------~~~~-~~~~~~~~~~~~ 252 (289)
T 1x8b_A 181 VTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ-------WHEI-RQGRLPRIPQVL 252 (289)
T ss_dssp CEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHH-------HHHH-HTTCCCCCSSCC
T ss_pred ccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhH-------HHHH-HcCCCCCCCccc
Confidence 9988877777899999999999866 567899999999999999999876544311 1111 112223455567
Q ss_pred HHHHHHHHHHhcccCcCCCCCHHHHHHHH
Q 014484 214 GTELVRLASRCLQSEARERPNAKSLVISL 242 (423)
Q Consensus 214 ~~~l~~li~~cl~~dp~~Rps~~~vl~~l 242 (423)
++++.++|.+||+.||.+|||+.++++|.
T Consensus 253 ~~~~~~li~~~l~~dp~~Rps~~~ll~h~ 281 (289)
T 1x8b_A 253 SQEFTELLKVMIHPDPERRPSAMALVKHS 281 (289)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHTCT
T ss_pred CHHHHHHHHHHhCCCcccCCCHHHHhhCh
Confidence 78999999999999999999999999874
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-41 Score=317.04 Aligned_cols=239 Identities=14% Similarity=0.130 Sum_probs=190.1
Q ss_pred CCCCccceeee--ecceeeeeecCCCh------hhHHHHHHHHHHHhcCC---CCCccceEeEEEeCC-----ceeEEEe
Q 014484 2 GGRCSKFSICW--FHCHLKSSVLESSD------LGETLNLEEAKAVGNLR---SERLANLIGCCYEAD-----ERLLVAE 65 (423)
Q Consensus 2 G~~g~v~~~~~--~~~~~~~~~~~~~~------~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~-----~~~lv~e 65 (423)
|+||.||++.+ .+..+++|++.... .....+.+|+.+++.++ ||||+++++++.... ..++|||
T Consensus 20 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~~~~lv~e 99 (308)
T 3g33_A 20 GAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFE 99 (308)
T ss_dssp SSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEEEEEEEEE
T ss_pred CCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCceeEEEEeh
Confidence 89999999996 36778888775322 12346677888777774 999999999998865 4789999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC---C
Q 014484 66 FMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---K 142 (423)
Q Consensus 66 ~~~~~~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~ 142 (423)
|+.+ +|.+++.......+++..+..++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++..... .
T Consensus 100 ~~~~-~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~ 177 (308)
T 3g33_A 100 HVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC-IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALT 177 (308)
T ss_dssp CCCC-BHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCTTTEEECTTSCEEECSCSCTTTSTTCCCSG
T ss_pred hhhc-CHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEcCCCCEEEeeCccccccCCCcccC
Confidence 9975 9999997655556999999999999999999999999 999999999999999999999999999866543 3
Q ss_pred ccccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCC--------------
Q 014484 143 SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGH-------------- 208 (423)
Q Consensus 143 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 208 (423)
...||+.|+|||++.+..++.++|||||||++|+|++|..||.............. .........
T Consensus 178 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~ 256 (308)
T 3g33_A 178 PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFD-LIGLPPEDDWPRDVSLPRGAFPP 256 (308)
T ss_dssp GGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHH-HHCCCCTTTSCSSCSSCGGGSCC
T ss_pred CccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH-HhCCCChhhccchhhccccccCC
Confidence 35689999999999989999999999999999999999999876533222111111 100000000
Q ss_pred --------CChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 209 --------FSNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 209 --------~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
..+.+++++.++|.+||+.||.+|||+.++++|-+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~ 299 (308)
T 3g33_A 257 RGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSY 299 (308)
T ss_dssp CCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTT
T ss_pred CCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCcc
Confidence 11235678999999999999999999999998743
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-42 Score=337.60 Aligned_cols=234 Identities=20% Similarity=0.242 Sum_probs=189.4
Q ss_pred CCCCccceeeee--cceeeeeecCCC----hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS----DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+... +..+++|++... ......+.+|+.++..++||||++++++|...+..++||||++||+|.++
T Consensus 159 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~~~L~~~ 238 (446)
T 4ejn_A 159 GTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFH 238 (446)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEECCCSSCBHHHH
T ss_pred CcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEeeCCCCcHHHH
Confidence 899999999874 677888887543 23345678899999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHc-CCCeeeccCCCCCeeecCCCCeEEccccccccCCC----CCccccCccc
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSS-KGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNLAF 150 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~~t~~y 150 (423)
+.. .+.+++..+..++.||+.||.|||+ +| |+||||||+|||++.++.+||+|||+++.... .....||+.|
T Consensus 239 l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~g-iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y 315 (446)
T 4ejn_A 239 LSR--ERVFSEDRARFYGAEIVSALDYLHSEKN-VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEY 315 (446)
T ss_dssp HHH--HSCCCHHHHHHHHHHHHHHHHHHHHHTC-CCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-----CCSSSCGGG
T ss_pred HHh--cCCCCHHHHHHHHHHHHHHHHHHhhcCC-EEECCCCHHHEEECCCCCEEEccCCCceeccCCCcccccccCCccc
Confidence 864 4579999999999999999999998 88 99999999999999999999999999976432 2346789999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcC
Q 014484 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (423)
Q Consensus 151 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (423)
+|||++.+..++.++|||||||++|||++|..||.......... .+.. ....++..+++++.+||.+||+.||.
T Consensus 316 ~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~----~i~~--~~~~~p~~~~~~~~~li~~~L~~dP~ 389 (446)
T 4ejn_A 316 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE----LILM--EEIRFPRTLGPEAKSLLSGLLKKDPK 389 (446)
T ss_dssp CCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH----HHHH--CCCCCCTTSCHHHHHHHHHHTCSSTT
T ss_pred cCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHH----HHHh--CCCCCCccCCHHHHHHHHHHcccCHH
Confidence 99999999999999999999999999999999987653222211 1111 12235566788999999999999999
Q ss_pred CCC-----CHHHHHHHHHh
Q 014484 231 ERP-----NAKSLVISLMS 244 (423)
Q Consensus 231 ~Rp-----s~~~vl~~l~~ 244 (423)
+|| |++++++|..-
T Consensus 390 ~R~~~~~~t~~ell~hp~f 408 (446)
T 4ejn_A 390 QRLGGGSEDAKEIMQHRFF 408 (446)
T ss_dssp TSTTCSTTTHHHHHTSGGG
T ss_pred HhCCCCCCCHHHHHhCccc
Confidence 999 99999988543
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-42 Score=322.82 Aligned_cols=237 Identities=16% Similarity=0.182 Sum_probs=186.1
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCce----eEEEecCCCCC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADER----LLVAEFMPNET 71 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~----~lv~e~~~~~~ 71 (423)
|+||.||.+.+. +..+++|++.... .....+.+|+.++..++||||+++++++...... |+||||++|++
T Consensus 23 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e~~~g~~ 102 (311)
T 3ork_A 23 GGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVT 102 (311)
T ss_dssp CSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEEECCCEEE
T ss_pred CCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEEEEecCCCCC
Confidence 899999999973 6778888875532 2345788999999999999999999999876554 99999999999
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-------Ccc
Q 014484 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-------KSY 144 (423)
Q Consensus 72 L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-------~~~ 144 (423)
|.+++.. .+.+++..++.++.|++.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ...
T Consensus 103 L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~ 179 (311)
T 3ork_A 103 LRDIVHT--EGPMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAV 179 (311)
T ss_dssp HHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEETTSCEEECCCSCC----------------
T ss_pred HHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CCcCCCCHHHEEEcCCCCEEEeeccCccccccccccccccccc
Confidence 9999964 456999999999999999999999999 999999999999999999999999999765432 234
Q ss_pred ccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHh
Q 014484 145 STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRC 224 (423)
Q Consensus 145 ~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 224 (423)
.||+.|+|||++.+..++.++|||||||++|+|++|..||................. .........+++++.++|.+|
T Consensus 180 ~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~ 257 (311)
T 3ork_A 180 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDP--IPPSARHEGLSADLDAVVLKA 257 (311)
T ss_dssp --CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCC--CCHHHHSTTCCHHHHHHHHHH
T ss_pred CcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCC--CCcccccCCCCHHHHHHHHHH
Confidence 589999999999988999999999999999999999999876532222111111100 000001223577899999999
Q ss_pred cccCcCCCCCHHHHHHHHH
Q 014484 225 LQSEARERPNAKSLVISLM 243 (423)
Q Consensus 225 l~~dp~~Rps~~~vl~~l~ 243 (423)
|+.||.+||+..+++.+..
T Consensus 258 l~~dP~~R~~~~~~l~~~l 276 (311)
T 3ork_A 258 LAKNPENRYQTAAEMRADL 276 (311)
T ss_dssp TCSSGGGSCSSHHHHHHHH
T ss_pred HhcCHhhChhhHHHHHHHH
Confidence 9999999998777776543
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-41 Score=313.16 Aligned_cols=234 Identities=20% Similarity=0.257 Sum_probs=194.1
Q ss_pred CCCCccceeeee--cceeeeeecCCChh----hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDL----GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.+. +..+++|++..... ....+.+|+.+++.++||||+++++++.+.+..++||||+++++|.++
T Consensus 20 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~ 99 (279)
T 3fdn_A 20 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRE 99 (279)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHH
T ss_pred CCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEecCCCCcHHHH
Confidence 899999999885 45677787644322 245688999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC--CccccCcccCCc
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTNLAFTPP 153 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--~~~~~t~~y~aP 153 (423)
+.. ...+++..++.++.|++.||.|||+++ |+||||||+||+++.++.++|+|||++...... ....+|+.|+||
T Consensus 100 l~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~-i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~y~aP 176 (279)
T 3fdn_A 100 LQK--LSKFDEQRTATYITELANALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPP 176 (279)
T ss_dssp HHH--HSSCCHHHHHHHHHHHHHHHHHHHTTT-CEECCCCGGGEEECTTSCEEECSCCEESCC--------CCCCTTCCH
T ss_pred HHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-EecccCChHhEEEcCCCCEEEEeccccccCCcccccccCCCCCccCH
Confidence 864 356999999999999999999999999 999999999999999999999999998655433 345689999999
Q ss_pred cccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCC
Q 014484 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERP 233 (423)
Q Consensus 154 E~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 233 (423)
|.+.+..++.++||||||+++|+|++|..||........... .. .....++..+++++.++|.+||+.||.+||
T Consensus 177 E~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 250 (279)
T 3fdn_A 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR----IS--RVEFTFPDFVTEGARDLISRLLKHNPSQRP 250 (279)
T ss_dssp HHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH----HH--HTCCCCCTTSCHHHHHHHHHHCCSSGGGSC
T ss_pred hHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHH----HH--hCCCCCCCcCCHHHHHHHHHHhccChhhCC
Confidence 999988899999999999999999999999876432221111 11 122234555678899999999999999999
Q ss_pred CHHHHHHHHHh
Q 014484 234 NAKSLVISLMS 244 (423)
Q Consensus 234 s~~~vl~~l~~ 244 (423)
|++++++|..-
T Consensus 251 s~~e~l~h~~~ 261 (279)
T 3fdn_A 251 MLREVLEHPWI 261 (279)
T ss_dssp CHHHHHHCHHH
T ss_pred CHHHHhhCccc
Confidence 99999998654
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-42 Score=315.91 Aligned_cols=234 Identities=19% Similarity=0.269 Sum_probs=196.0
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEe----------------CCceeEE
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYE----------------ADERLLV 63 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----------------~~~~~lv 63 (423)
|+||.||.+.+. +..+++|.+.... ..+.+|++++..++||||+++++++.. ....++|
T Consensus 22 G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv 98 (284)
T 2a19_B 22 GGFGQVFKAKHRIDGKTYVIKRVKYNN---EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQ 98 (284)
T ss_dssp SSSCCEEEEEETTTCCEEEEEEEECCS---GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------CCEEEEEEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEecccc---HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccccccCcceEEEE
Confidence 899999999985 7778888876543 457789999999999999999999865 3457999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC--
Q 014484 64 AEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-- 141 (423)
Q Consensus 64 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-- 141 (423)
|||+++++|.+++....+..+++..++.++.|++.||.|||+++ |+||||||+||+++.++.++|+|||++......
T Consensus 99 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 177 (284)
T 2a19_B 99 MEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK-LINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK 177 (284)
T ss_dssp ECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCCTTCEESSCCSC
T ss_pred EeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCCHHHEEEcCCCCEEECcchhheecccccc
Confidence 99999999999997545567999999999999999999999999 999999999999999999999999998866543
Q ss_pred -CccccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHH
Q 014484 142 -KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRL 220 (423)
Q Consensus 142 -~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 220 (423)
....+|+.|+|||.+.+..++.++|||||||++|+|++|..|+.... ....... ....+..++.++.++
T Consensus 178 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~------~~~~~~~----~~~~~~~~~~~~~~l 247 (284)
T 2a19_B 178 RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS------KFFTDLR----DGIISDIFDKKEKTL 247 (284)
T ss_dssp CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH------HHHHHHH----TTCCCTTSCHHHHHH
T ss_pred ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH------HHHHHhh----cccccccCCHHHHHH
Confidence 34568999999999998889999999999999999999997654321 1111111 122344556789999
Q ss_pred HHHhcccCcCCCCCHHHHHHHHHhhhhhc
Q 014484 221 ASRCLQSEARERPNAKSLVISLMSLQKEA 249 (423)
Q Consensus 221 i~~cl~~dp~~Rps~~~vl~~l~~~~~~~ 249 (423)
|.+||+.||.+|||+.+++++|+.+....
T Consensus 248 i~~~l~~dp~~Rps~~e~l~~l~~~~~~~ 276 (284)
T 2a19_B 248 LQKLLSKKPEDRPNTSEILRTLTVWKKSP 276 (284)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHTC--
T ss_pred HHHHccCChhhCcCHHHHHHHHHHHhhCC
Confidence 99999999999999999999999887653
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-42 Score=320.71 Aligned_cols=242 Identities=20% Similarity=0.286 Sum_probs=197.8
Q ss_pred CCCCccceeeee-------cceeeeeecCCCh--hhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCc-eeEEEecCCCC
Q 014484 2 GGRCSKFSICWF-------HCHLKSSVLESSD--LGETLNLEEAKAVGNL-RSERLANLIGCCYEADE-RLLVAEFMPNE 70 (423)
Q Consensus 2 G~~g~v~~~~~~-------~~~~~~~~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~-~~lv~e~~~~~ 70 (423)
|+||.||.+.+. +..+++|++.... .....+.+|++++..+ +||||+++++++...+. .++||||++|+
T Consensus 38 G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~lv~e~~~~~ 117 (316)
T 2xir_A 38 GAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117 (316)
T ss_dssp CSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEEECCTTE
T ss_pred CCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceEEEEEcCCCC
Confidence 899999999864 3567888775533 3456788999999999 79999999999987654 89999999999
Q ss_pred CHHhhhccCCC--------------CCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccc
Q 014484 71 TLAKHLFHWET--------------QPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK 136 (423)
Q Consensus 71 ~L~~~i~~~~~--------------~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~ 136 (423)
+|.+++..... ..+++..++.++.|++.||.|||+++ |+||||||+||+++.++.++|+|||+++
T Consensus 118 ~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 196 (316)
T 2xir_A 118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSEKNVVKICDFGLAR 196 (316)
T ss_dssp EHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCGGGS
T ss_pred cHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC-cccccCccceEEECCCCCEEECCCcccc
Confidence 99999965322 12899999999999999999999999 9999999999999999999999999998
Q ss_pred cCCCCC------ccccCcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCC
Q 014484 137 NSRDGK------SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHF 209 (423)
Q Consensus 137 ~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (423)
...... ...+|+.|+|||++.+..++.++|||||||++|+|++ |..||....... .....+........
T Consensus 197 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~----~~~~~~~~~~~~~~ 272 (316)
T 2xir_A 197 DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE----EFCRRLKEGTRMRA 272 (316)
T ss_dssp CTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSH----HHHHHHHHTCCCCC
T ss_pred ccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhH----HHHHHhccCccCCC
Confidence 654332 2346788999999998899999999999999999998 888876532111 11122222222334
Q ss_pred ChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhhh
Q 014484 210 SNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 210 ~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~~~~ 248 (423)
+..+++++.+++.+||+.||.+|||+.+++++|..+...
T Consensus 273 ~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 311 (316)
T 2xir_A 273 PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 311 (316)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence 555678899999999999999999999999999988755
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-42 Score=342.73 Aligned_cols=239 Identities=21% Similarity=0.272 Sum_probs=200.0
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+... +..+++|++.... .....+.+|+++|..++||||+++++++.+.+..|+||||++||+|.++
T Consensus 195 G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy~~gg~L~~~ 274 (576)
T 2acx_A 195 GGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFH 274 (576)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHH
T ss_pred CCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEcCCCCcHHHH
Confidence 899999999884 7778888875432 2345678999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC---CccccCcccCC
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTP 152 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~~t~~y~a 152 (423)
+.......+++..++.++.||+.||.|||+++ |+||||||+|||++.+|++||+|||+++..... ....||+.|+|
T Consensus 275 l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~g-IvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~~~~~~GT~~Y~A 353 (576)
T 2acx_A 275 IYHMGQAGFPEARAVFYAAEICCGLEDLHRER-IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMA 353 (576)
T ss_dssp HHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCEECCCSCGGGCC
T ss_pred HHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeccCCchheEEEeCCCCeEEEecccceecccCccccccCCCccccC
Confidence 97655556999999999999999999999999 999999999999999999999999999876543 33578999999
Q ss_pred ccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCC
Q 014484 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (423)
Q Consensus 153 PE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (423)
||++.+..++.++|||||||++|||++|..||......... ..+...+. .....++..+++++.+||.+||+.||.+|
T Consensus 354 PEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~-~~i~~~i~-~~~~~~p~~~s~~~~dLI~~lL~~dP~~R 431 (576)
T 2acx_A 354 PEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR-EEVERLVK-EVPEEYSERFSPQARSLCSQLLCKDPAER 431 (576)
T ss_dssp HHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCH-HHHHHHHH-HCCCCCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred HHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhH-HHHHHHhh-cccccCCccCCHHHHHHHHHhccCCHHHc
Confidence 99999888999999999999999999999998764211000 11111111 12234556678899999999999999999
Q ss_pred C-----CHHHHHHHHH
Q 014484 233 P-----NAKSLVISLM 243 (423)
Q Consensus 233 p-----s~~~vl~~l~ 243 (423)
| +++++++|..
T Consensus 432 ~g~~~~sa~eil~Hpf 447 (576)
T 2acx_A 432 LGCRGGSAREVKEHPL 447 (576)
T ss_dssp TTCSSSHHHHHHTSGG
T ss_pred CCCCCCCHHHHHhChh
Confidence 9 7899998854
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-41 Score=315.59 Aligned_cols=247 Identities=14% Similarity=0.175 Sum_probs=191.5
Q ss_pred CCCCccceeeee--cceeeeeecCC----ChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLES----SDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.+. +..+++|++.. .......+.+|+.++..++||||+++++++..++..++||||+++++|.++
T Consensus 43 G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 122 (310)
T 2wqm_A 43 GQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRM 122 (310)
T ss_dssp C--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCSCBHHHH
T ss_pred CCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEecCCCCCHHHH
Confidence 899999999874 67788887754 234466788999999999999999999999999999999999999999998
Q ss_pred hcc--CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcc
Q 014484 76 LFH--WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLA 149 (423)
Q Consensus 76 i~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~ 149 (423)
+.. .....+++..++.++.|++.||.|||+++ ++||||||+||+++.++.++|+|||++...... ....+++.
T Consensus 123 l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~ 201 (310)
T 2wqm_A 123 IKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR-VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPY 201 (310)
T ss_dssp HHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCC------------------CCS
T ss_pred HHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCC-eeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCccccccCCCee
Confidence 853 13567999999999999999999999999 999999999999999999999999998765433 23468899
Q ss_pred cCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCc
Q 014484 150 FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEA 229 (423)
Q Consensus 150 y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 229 (423)
|+|||.+.+..++.++|||||||++|+|++|..||.......... .............+..+++++.+++.+||+.||
T Consensus 202 y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp 279 (310)
T 2wqm_A 202 YMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSL--CKKIEQCDYPPLPSDHYSEELRQLVNMCINPDP 279 (310)
T ss_dssp SCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHH--HHHHHTTCSCCCCTTTSCHHHHHHHHHHTCSSG
T ss_pred EeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHH--HHHhhcccCCCCcccccCHHHHHHHHHHcCCCh
Confidence 999999998889999999999999999999999886542111110 111111111122234567889999999999999
Q ss_pred CCCCCHHHHHHHHHhhhhhccC
Q 014484 230 RERPNAKSLVISLMSLQKEAEV 251 (423)
Q Consensus 230 ~~Rps~~~vl~~l~~~~~~~~~ 251 (423)
.+|||+.++++.|.++......
T Consensus 280 ~~Rps~~~il~~l~~l~~~~~~ 301 (310)
T 2wqm_A 280 EKRPDVTYVYDVAKRMHACTAS 301 (310)
T ss_dssp GGSCCHHHHHHHHHHHHHHHC-
T ss_pred hhCCCHHHHHHHHHHHHHhhhh
Confidence 9999999999999999876543
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-42 Score=324.75 Aligned_cols=236 Identities=16% Similarity=0.182 Sum_probs=175.4
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHHhcCC-CCCccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNLR-SERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
|+||.||.+.+. +..+++|++... ....+.+|+.++..+. ||||+++++++.++...|+||||++|++|.+++..
T Consensus 22 G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 99 (325)
T 3kn6_A 22 GSFSICRKCVHKKSNQAFAVKIISKR--MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKK 99 (325)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEEGG--GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHH
T ss_pred CCCeEEEEEEECCCCCEEEEEEEChh--hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcHHHHHHh
Confidence 899999999985 677888887543 3467789999999996 99999999999999999999999999999999965
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCC---CeEEccccccccCCCC----CccccCcccC
Q 014484 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG---NPRLSSFGLMKNSRDG----KSYSTNLAFT 151 (423)
Q Consensus 79 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~---~~kl~Dfg~~~~~~~~----~~~~~t~~y~ 151 (423)
.+.+++..+..++.|++.||.|||+++ |+||||||+|||++.++ .+||+|||+++..... ....+|+.|+
T Consensus 100 --~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~ 176 (325)
T 3kn6_A 100 --KKHFSETEASYIMRKLVSAVSHMHDVG-VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYA 176 (325)
T ss_dssp --CSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEEC----CEEEECCCTTCEECCC---------------
T ss_pred --cCCCCHHHHHHHHHHHHHHHHHHHHCC-CeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcccccCCCcCcc
Confidence 457999999999999999999999999 99999999999997765 7999999999865433 3356789999
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhh--chhhhhccccccCCCC----hhHHHHHHHHHHHhc
Q 014484 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRS--KNFLLLMDSALEGHFS----NDEGTELVRLASRCL 225 (423)
Q Consensus 152 aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~----~~~~~~l~~li~~cl 225 (423)
|||.+.+..++.++|||||||++|+|++|..||.......... ......+.... ..++ ..+++++.++|.+||
T Consensus 177 aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~s~~~~~li~~~L 255 (325)
T 3kn6_A 177 APELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGD-FSFEGEAWKNVSQEAKDLIQGLL 255 (325)
T ss_dssp -------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTC-CCCCSHHHHTSCHHHHHHHHHHH
T ss_pred CHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCC-CCCCcccccCCCHHHHHHHHHHC
Confidence 9999998899999999999999999999999987542211000 01111111111 1111 235788999999999
Q ss_pred ccCcCCCCCHHHHHHHHH
Q 014484 226 QSEARERPNAKSLVISLM 243 (423)
Q Consensus 226 ~~dp~~Rps~~~vl~~l~ 243 (423)
+.||.+|||++++++|.+
T Consensus 256 ~~dP~~Rpt~~ell~h~w 273 (325)
T 3kn6_A 256 TVDPNKRLKMSGLRYNEW 273 (325)
T ss_dssp CCCTTTCCCTTTSTTCGG
T ss_pred CCChhHCCCHHHHhcChh
Confidence 999999999999987743
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-41 Score=320.38 Aligned_cols=241 Identities=19% Similarity=0.263 Sum_probs=197.3
Q ss_pred CCCCccceeeee-------cceeeeeecCC--ChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICWF-------HCHLKSSVLES--SDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~~-------~~~~~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 72 (423)
|+||.||.+.+. +..+++|.+.. .......+.+|+.++..++||||+++++++......++||||++|++|
T Consensus 41 G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 120 (327)
T 2yfx_A 41 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDL 120 (327)
T ss_dssp -CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEH
T ss_pred CCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcEEEEecCCCCcH
Confidence 899999999853 44688888754 334566789999999999999999999999999999999999999999
Q ss_pred HhhhccCCC-----CCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCC---CCeEEccccccccCCC----
Q 014484 73 AKHLFHWET-----QPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKD---GNPRLSSFGLMKNSRD---- 140 (423)
Q Consensus 73 ~~~i~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~---~~~kl~Dfg~~~~~~~---- 140 (423)
.+++..... ..+++..++.++.|++.||.|||+++ |+||||||+||+++.+ +.++|+|||+++....
T Consensus 121 ~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~-i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~~ 199 (327)
T 2yfx_A 121 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH-FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 199 (327)
T ss_dssp HHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHC----
T ss_pred HHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC-eecCcCCHhHEEEecCCCcceEEECcccccccccccccc
Confidence 999975322 45899999999999999999999999 9999999999999844 4699999999874322
Q ss_pred --CCccccCcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHH
Q 014484 141 --GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTEL 217 (423)
Q Consensus 141 --~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 217 (423)
.....+|+.|+|||.+.+..++.++|||||||++|+|++ |..||...... .....+........+..++..+
T Consensus 200 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l 274 (327)
T 2yfx_A 200 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ-----EVLEFVTSGGRMDPPKNCPGPV 274 (327)
T ss_dssp --CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-----HHHHHHHTTCCCCCCTTCCHHH
T ss_pred ccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH-----HHHHHHhcCCCCCCCCCCCHHH
Confidence 233457889999999998899999999999999999998 87777654221 1122222222334455677889
Q ss_pred HHHHHHhcccCcCCCCCHHHHHHHHHhhhhh
Q 014484 218 VRLASRCLQSEARERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 218 ~~li~~cl~~dp~~Rps~~~vl~~l~~~~~~ 248 (423)
.++|.+||+.||.+|||+.+++++|+.+...
T Consensus 275 ~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~ 305 (327)
T 2yfx_A 275 YRIMTQCWQHQPEDRPNFAIILERIEYCTQD 305 (327)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHhcCChhhCcCHHHHHHHHHHHhcC
Confidence 9999999999999999999999999988765
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-42 Score=322.95 Aligned_cols=227 Identities=16% Similarity=0.141 Sum_probs=192.2
Q ss_pred CCCCccceeeee--cceeeeeecCCChh---------hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDL---------GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNE 70 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~---------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~ 70 (423)
|+||.||.+.+. +..+++|++..... ....+.+|+.++..++||||+++++++.+.+..++||||+.+|
T Consensus 35 G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~g 114 (335)
T 3dls_A 35 GAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSG 114 (335)
T ss_dssp SSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTS
T ss_pred cCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCEEEEEEEeCCCC
Confidence 899999999864 67788887765432 2346778999999999999999999999999999999999776
Q ss_pred -CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC---cccc
Q 014484 71 -TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK---SYST 146 (423)
Q Consensus 71 -~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---~~~~ 146 (423)
+|.+++.. ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++...... ...|
T Consensus 115 ~~l~~~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~g 191 (335)
T 3dls_A 115 LDLFAFIDR--HPRLDEPLASYIFRQLVSAVGYLRLKD-IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCG 191 (335)
T ss_dssp CBHHHHHHT--CCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECCTTCCBCEECS
T ss_pred ccHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEEeccCHHHEEEcCCCcEEEeecccceECCCCCceeccCC
Confidence 99999964 457999999999999999999999999 9999999999999999999999999998765443 3568
Q ss_pred CcccCCccccccCCC-CCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhc
Q 014484 147 NLAFTPPEYMRTGRV-TPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCL 225 (423)
Q Consensus 147 t~~y~aPE~~~~~~~-~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 225 (423)
|+.|+|||++.+..+ +.++|||||||++|+|++|..||..... .... ....+..+++++.++|.+||
T Consensus 192 t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~----------~~~~--~~~~~~~~~~~l~~li~~~L 259 (335)
T 3dls_A 192 TIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE----------TVEA--AIHPPYLVSKELMSLVSGLL 259 (335)
T ss_dssp CGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG----------GTTT--CCCCSSCCCHHHHHHHHHHT
T ss_pred CccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH----------HHhh--ccCCCcccCHHHHHHHHHHc
Confidence 999999999988776 7899999999999999999998865211 1111 11223346778999999999
Q ss_pred ccCcCCCCCHHHHHHHHH
Q 014484 226 QSEARERPNAKSLVISLM 243 (423)
Q Consensus 226 ~~dp~~Rps~~~vl~~l~ 243 (423)
+.||.+|||++++++|.+
T Consensus 260 ~~dP~~Rps~~ell~hp~ 277 (335)
T 3dls_A 260 QPVPERRTTLEKLVTDPW 277 (335)
T ss_dssp CSSGGGSCCHHHHHHCTT
T ss_pred cCChhhCcCHHHHhcCcc
Confidence 999999999999999854
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-41 Score=315.40 Aligned_cols=235 Identities=16% Similarity=0.236 Sum_probs=198.4
Q ss_pred CCCCccceeeee--cceeeeeecCCC--hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~ 77 (423)
|+||.||.+.+. +..+++|++... ......+.+|+.++..++||||+++++++..++..++||||+++++|.+++.
T Consensus 33 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~ 112 (303)
T 3a7i_A 33 GSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE 112 (303)
T ss_dssp CSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHT
T ss_pred cCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCCCCcHHHHHh
Confidence 899999999874 667888877544 2346788999999999999999999999999999999999999999999994
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccCCc
Q 014484 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPP 153 (423)
Q Consensus 78 ~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~aP 153 (423)
.+.+++..++.++.|++.||.|||+++ ++||||||+||+++.++.++|+|||++...... ....+|+.|+||
T Consensus 113 ---~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aP 188 (303)
T 3a7i_A 113 ---PGPLDETQIATILREILKGLDYLHSEK-KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAP 188 (303)
T ss_dssp ---TSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCBCCCCSCGGGCCH
T ss_pred ---cCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCChheEEECCCCCEEEeecccceecCccccccCccCCCcCccCH
Confidence 457999999999999999999999999 999999999999999999999999998765433 345689999999
Q ss_pred cccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCC
Q 014484 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERP 233 (423)
Q Consensus 154 E~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 233 (423)
|.+.+..++.++|||||||++|+|++|..||....... ....+........+..++..+.+++.+||+.||.+||
T Consensus 189 E~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp 263 (303)
T 3a7i_A 189 EVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMK-----VLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRP 263 (303)
T ss_dssp HHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-----HHHHHHHSCCCCCCSSCCHHHHHHHHHHCCSSGGGSC
T ss_pred HHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHH-----HHHHhhcCCCCCCccccCHHHHHHHHHHcCCChhhCc
Confidence 99998899999999999999999999998886532111 1111112222334556678899999999999999999
Q ss_pred CHHHHHHHHHhh
Q 014484 234 NAKSLVISLMSL 245 (423)
Q Consensus 234 s~~~vl~~l~~~ 245 (423)
|+.+++++..-.
T Consensus 264 s~~~ll~~~~~~ 275 (303)
T 3a7i_A 264 TAKELLKHKFIL 275 (303)
T ss_dssp CHHHHTTCHHHH
T ss_pred CHHHHhhChhhh
Confidence 999999886643
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-42 Score=332.15 Aligned_cols=238 Identities=16% Similarity=0.125 Sum_probs=193.2
Q ss_pred CCCCccceeeee--cceeeeeecCCChh----hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDL----GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+... +..+++|++.+... ....+.+|+.++..++||||++++++|.+.+..|+||||++||+|.++
T Consensus 72 G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE~~~gg~L~~~ 151 (412)
T 2vd5_A 72 GAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTL 151 (412)
T ss_dssp CSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCCSCBHHHH
T ss_pred CCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEcCCCCCcHHHH
Confidence 899999999984 77888888765332 234578999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC-----ccccCccc
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-----SYSTNLAF 150 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-----~~~~t~~y 150 (423)
+.+ .+..+++..+..++.||+.||.|||+++ |+||||||+|||++.+|++||+|||+++...... ...||+.|
T Consensus 152 l~~-~~~~l~~~~~~~~~~qi~~aL~~LH~~g-iiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~~~~~~~~Gt~~Y 229 (412)
T 2vd5_A 152 LSK-FGERIPAEMARFYLAEIVMAIDSVHRLG-YVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDY 229 (412)
T ss_dssp HHH-HSSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEECSSCCSCGGG
T ss_pred HHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecccCHHHeeecCCCCEEEeechhheeccCCCccccceeccccCc
Confidence 964 2347999999999999999999999999 9999999999999999999999999998765432 35789999
Q ss_pred CCccccc-------cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHH
Q 014484 151 TPPEYMR-------TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASR 223 (423)
Q Consensus 151 ~aPE~~~-------~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 223 (423)
+|||++. +..++.++|||||||++|||++|..||.............. .......+..+..+++++.+||.+
T Consensus 230 ~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~-~~~~~~~p~~~~~~s~~~~dli~~ 308 (412)
T 2vd5_A 230 LSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVH-YKEHLSLPLVDEGVPEEARDFIQR 308 (412)
T ss_dssp CCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT-HHHHCCCC----CCCHHHHHHHHT
T ss_pred CCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHh-cccCcCCCccccCCCHHHHHHHHH
Confidence 9999987 35689999999999999999999999876532222111111 000011111234567899999999
Q ss_pred hcccCcCCC---CCHHHHHHHHH
Q 014484 224 CLQSEARER---PNAKSLVISLM 243 (423)
Q Consensus 224 cl~~dp~~R---ps~~~vl~~l~ 243 (423)
||. +|.+| |+++++++|-.
T Consensus 309 lL~-~p~~Rlgr~~~~ei~~Hpf 330 (412)
T 2vd5_A 309 LLC-PPETRLGRGGAGDFRTHPF 330 (412)
T ss_dssp TSS-CGGGCTTTTTHHHHHTSGG
T ss_pred HcC-ChhhcCCCCCHHHHhcCCC
Confidence 999 99998 69999998854
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-41 Score=319.16 Aligned_cols=240 Identities=18% Similarity=0.226 Sum_probs=188.7
Q ss_pred CCCCccceeeee--cceeeeeecCCCh--hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~ 77 (423)
|+||.||.+.+. +..+++|++.... .....+.+|+++++.++||||+++++++..++..++||||++| +|.+++.
T Consensus 16 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~-~L~~~l~ 94 (317)
T 2pmi_A 16 GTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMD 94 (317)
T ss_dssp ---CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECCCC-BHHHHHH
T ss_pred CCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEecCC-CHHHHHH
Confidence 899999999875 6778888765432 2356788999999999999999999999999999999999985 9999885
Q ss_pred cC----CCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcc
Q 014484 78 HW----ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLA 149 (423)
Q Consensus 78 ~~----~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~ 149 (423)
.. ....+++..+..++.||+.||.|||++| |+||||||+|||++.++.+||+|||+++..... ....+|+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~ 173 (317)
T 2pmi_A 95 SRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK-ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLW 173 (317)
T ss_dssp HHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCSSCEETTSCCCCCCCCCSCCT
T ss_pred hccccccccCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCChHHeEEcCCCCEEECcCccceecCCCcccCCCCccccc
Confidence 32 2246999999999999999999999999 999999999999999999999999999865432 34568999
Q ss_pred cCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhcc----------------ccc-------
Q 014484 150 FTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD----------------SAL------- 205 (423)
Q Consensus 150 y~aPE~~~~~-~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~----------------~~~------- 205 (423)
|+|||++.+. .++.++|||||||++|+|++|..||.................. ...
T Consensus 174 y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (317)
T 2pmi_A 174 YRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRD 253 (317)
T ss_dssp TCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCC
T ss_pred ccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhcccccccccchh
Confidence 9999998764 5899999999999999999999998764322111111000000 000
Q ss_pred -----cCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 206 -----EGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 206 -----~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
....+..++.++.+||.+||+.||++|||++++++|..
T Consensus 254 ~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~ 296 (317)
T 2pmi_A 254 LRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPW 296 (317)
T ss_dssp SHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGG
T ss_pred HHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChh
Confidence 00111235678999999999999999999999998744
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-41 Score=320.63 Aligned_cols=239 Identities=12% Similarity=0.105 Sum_probs=195.8
Q ss_pred CCCCccceeeee--cceeeeeecCCCh---hhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD---LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.+. +..+++|++.... .....+.+|+.++..+ .||||+++++++...+..++||||+.|++|.++
T Consensus 40 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 119 (327)
T 3lm5_A 40 GKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSL 119 (327)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTTEEGGGG
T ss_pred CCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCCCcHHHH
Confidence 899999999885 6788888775533 2356888999999999 569999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecC---CCCeEEccccccccCCCC---CccccCcc
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK---DGNPRLSSFGLMKNSRDG---KSYSTNLA 149 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~---~~~~kl~Dfg~~~~~~~~---~~~~~t~~ 149 (423)
+.......+++..++.++.|++.||.|||+++ |+||||||+||+++. ++.++|+|||+++..... ....||+.
T Consensus 120 ~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~g-ivH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~ 198 (327)
T 3lm5_A 120 CLPELAEMVSENDVIRLIKQILEGVYYLHQNN-IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPE 198 (327)
T ss_dssp GSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEESCBTTBCCEEECCGGGCEEC---------CCCGG
T ss_pred HHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC-eecCcCChHHEEEecCCCCCcEEEeeCccccccCCccccccccCCcC
Confidence 87655678999999999999999999999999 999999999999987 789999999999876543 33568999
Q ss_pred cCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCc
Q 014484 150 FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEA 229 (423)
Q Consensus 150 y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 229 (423)
|+|||++.+..++.++|||||||++|+|++|..||........... . ..............+++.+.++|.+||+.||
T Consensus 199 y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~-i-~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP 276 (327)
T 3lm5_A 199 YLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLN-I-SQVNVDYSEETFSSVSQLATDFIQSLLVKNP 276 (327)
T ss_dssp GCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH-H-HHTCCCCCTTTTTTSCHHHHHHHHHHSCSSG
T ss_pred ccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHH-H-HhcccccCchhhcccCHHHHHHHHHHcCCCh
Confidence 9999999988999999999999999999999999876432221111 1 1111122223334567889999999999999
Q ss_pred CCCCCHHHHHHHHH
Q 014484 230 RERPNAKSLVISLM 243 (423)
Q Consensus 230 ~~Rps~~~vl~~l~ 243 (423)
.+|||++++++|..
T Consensus 277 ~~Rpt~~~ll~h~~ 290 (327)
T 3lm5_A 277 EKRPTAEICLSHSW 290 (327)
T ss_dssp GGSCCHHHHTTCGG
T ss_pred hhCcCHHHHhCCHh
Confidence 99999999998754
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-41 Score=320.21 Aligned_cols=232 Identities=15% Similarity=0.141 Sum_probs=194.2
Q ss_pred CCCCccceeeee--cceeeeeecCCChh-------hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDL-------GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~-------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 72 (423)
|+||.||.+.+. +..+++|++..... ....+.+|+.++..++||||+++++++.+.+..++||||++|++|
T Consensus 23 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 102 (321)
T 2a2a_A 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGEL 102 (321)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred cCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEEcCCCCcH
Confidence 899999999885 67788887754322 356789999999999999999999999999999999999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCC----CeEEccccccccCCCC---Cccc
Q 014484 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG----NPRLSSFGLMKNSRDG---KSYS 145 (423)
Q Consensus 73 ~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~----~~kl~Dfg~~~~~~~~---~~~~ 145 (423)
.+++.. ...+++..++.++.|++.||.|||+++ |+||||||+||+++.++ .++|+|||+++..... ....
T Consensus 103 ~~~l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~-ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 179 (321)
T 2a2a_A 103 FDFLAQ--KESLSEEEATSFIKQILDGVNYLHTKK-IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF 179 (321)
T ss_dssp HHHHHT--CSCEEHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCTTCCCCCCC
T ss_pred HHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCChHHEEEecCCCCcCCEEEccCccceecCccccccccC
Confidence 999964 457999999999999999999999999 99999999999999888 7999999999876543 3456
Q ss_pred cCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCC----hhHHHHHHHHH
Q 014484 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFS----NDEGTELVRLA 221 (423)
Q Consensus 146 ~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li 221 (423)
||+.|+|||.+.+..++.++|||||||++|+|++|..||.......... ..... ...++ ...++.+.++|
T Consensus 180 gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~----~i~~~--~~~~~~~~~~~~~~~~~~li 253 (321)
T 2a2a_A 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA----NITSV--SYDFDEEFFSHTSELAKDFI 253 (321)
T ss_dssp SCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHH----HHHTT--CCCCCHHHHTTCCHHHHHHH
T ss_pred CCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHH----HHHhc--ccccChhhhcccCHHHHHHH
Confidence 8999999999998899999999999999999999999987643221111 11111 11112 23567899999
Q ss_pred HHhcccCcCCCCCHHHHHHHH
Q 014484 222 SRCLQSEARERPNAKSLVISL 242 (423)
Q Consensus 222 ~~cl~~dp~~Rps~~~vl~~l 242 (423)
.+||+.||.+|||+.++++|.
T Consensus 254 ~~~l~~dp~~Rps~~e~l~hp 274 (321)
T 2a2a_A 254 RKLLVKETRKRLTIQEALRHP 274 (321)
T ss_dssp HTTSCSSTTTSCCHHHHHHST
T ss_pred HHHcCCChhhCcCHHHHhcCc
Confidence 999999999999999999873
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-42 Score=327.92 Aligned_cols=246 Identities=15% Similarity=0.089 Sum_probs=196.1
Q ss_pred CCCCccceeeee----------cceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccc---------------eEeEEEe
Q 014484 2 GGRCSKFSICWF----------HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLAN---------------LIGCCYE 56 (423)
Q Consensus 2 G~~g~v~~~~~~----------~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~---------------~~~~~~~ 56 (423)
|+||.||.+.+. +..+++|++... ..+.+|++++..++||||++ +++++..
T Consensus 53 G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~~~~~~~~ 128 (352)
T 2jii_A 53 DNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPTCMGFGVH 128 (352)
T ss_dssp ETTEEEEEEEECC-----------CEEEEEEETT----STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCCCCCEEEEE
T ss_pred CCCeEEEEEeecCCccccccccCceEEEEEeccc----chHHHHHHHHHHhcccchhhhhhhhccCCccCccchhhcccc
Confidence 899999999884 467888876544 46889999999999999887 6778877
Q ss_pred -CCceeEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCC--CeEEcccc
Q 014484 57 -ADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG--NPRLSSFG 133 (423)
Q Consensus 57 -~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~--~~kl~Dfg 133 (423)
+...++||||+ +++|.+++.......+++..++.++.||+.||.|||+++ |+||||||+|||++.++ .++|+|||
T Consensus 129 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dikp~NIl~~~~~~~~~kl~Dfg 206 (352)
T 2jii_A 129 QDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENE-YVHGNVTAENIFVDPEDQSQVTLAGYG 206 (352)
T ss_dssp TTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCCGGGEEEETTEEEEEEECCGG
T ss_pred CCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCCHHHEEEcCCCCceEEEecCc
Confidence 66789999999 999999997644467999999999999999999999999 99999999999999998 89999999
Q ss_pred ccccCCCC-----------CccccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhcc
Q 014484 134 LMKNSRDG-----------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD 202 (423)
Q Consensus 134 ~~~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~ 202 (423)
+++..... ....||+.|+|||.+.+..++.++|||||||++|+|++|..||..................
T Consensus 207 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 286 (352)
T 2jii_A 207 FAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFV 286 (352)
T ss_dssp GCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHH
T ss_pred ceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhcc
Confidence 99765422 2346899999999999889999999999999999999999988764211111111111000
Q ss_pred ---ccccCC--CChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhhhccCCh
Q 014484 203 ---SALEGH--FSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEVPS 253 (423)
Q Consensus 203 ---~~~~~~--~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~~~~~~~~~ 253 (423)
...... ....+++++.+++.+||+.||.+|||++++++.|..+........
T Consensus 287 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~~ 342 (352)
T 2jii_A 287 DKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRVSP 342 (352)
T ss_dssp HSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCT
T ss_pred CChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcCCCc
Confidence 011100 012346889999999999999999999999999999887754433
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-42 Score=325.81 Aligned_cols=243 Identities=16% Similarity=0.235 Sum_probs=196.3
Q ss_pred CCCCccceeeee--cceeeeeecCCC--hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~ 77 (423)
|+||.||.+.+. +..+++|++... ......+.+|+.++..++||||+++++++..++..++||||++|++|.+++.
T Consensus 44 G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~ 123 (360)
T 3eqc_A 44 GNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK 123 (360)
T ss_dssp CSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHH
T ss_pred CCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECCCCCCHHHHHH
Confidence 899999999986 677888877543 3446788999999999999999999999999999999999999999999996
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHcC-CCeeeccCCCCCeeecCCCCeEEccccccccCC--CCCccccCcccCCcc
Q 014484 78 HWETQPMKWAMRLRVALYLAQALEYCSSK-GRALYHDLNAYRILFDKDGNPRLSSFGLMKNSR--DGKSYSTNLAFTPPE 154 (423)
Q Consensus 78 ~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~--~~~~~~~t~~y~aPE 154 (423)
. .+.+++..+..++.|++.||.|||++ + |+||||||+||+++.++.++|+|||++.... ......||+.|+|||
T Consensus 124 ~--~~~~~~~~~~~i~~~i~~~l~~lh~~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~gt~~y~aPE 200 (360)
T 3eqc_A 124 K--AGRIPEQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPE 200 (360)
T ss_dssp H--HSSCCHHHHHHHHHHHHHHHHHHHHHHC-CCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC----CCCCTTCCHH
T ss_pred H--cCCCCHHHHHHHHHHHHHHHHHHHHhCC-EEcCCccHHHEEECCCCCEEEEECCCCcccccccccCCCCCCCeECHH
Confidence 4 34699999999999999999999996 8 9999999999999999999999999986443 234457899999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhc--------------------------------------h
Q 014484 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSK--------------------------------------N 196 (423)
Q Consensus 155 ~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~--------------------------------------~ 196 (423)
++.+..++.++|||||||++|+|++|..||........... .
T Consensus 201 ~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (360)
T 3eqc_A 201 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFEL 280 (360)
T ss_dssp HHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------------------CCCHHHH
T ss_pred HHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccCCCCcccchhh
Confidence 99998999999999999999999999998865422211100 0
Q ss_pred hhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhh
Q 014484 197 FLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQK 247 (423)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~~~ 247 (423)
.............+..++.++.+||.+||+.||.+|||++++++|..--..
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 331 (360)
T 3eqc_A 281 LDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 331 (360)
T ss_dssp HHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHH
T ss_pred hhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhcc
Confidence 000111111111223357789999999999999999999999998765443
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-42 Score=326.51 Aligned_cols=242 Identities=16% Similarity=0.109 Sum_probs=187.3
Q ss_pred CCCCccceeeee-----cceeeeeecCCChh------------hHHHHHHHHHHHhcCCCCCccceEeEEEe----CCce
Q 014484 2 GGRCSKFSICWF-----HCHLKSSVLESSDL------------GETLNLEEAKAVGNLRSERLANLIGCCYE----ADER 60 (423)
Q Consensus 2 G~~g~v~~~~~~-----~~~~~~~~~~~~~~------------~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~ 60 (423)
|+||.||++.+. +..+++|+...... ....+.+|+..+..++||||+++++++.. ....
T Consensus 48 G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~~~~~~~~~~ 127 (345)
T 2v62_A 48 GGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYR 127 (345)
T ss_dssp ----CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEEEESSSCEEE
T ss_pred cCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecccccccCCCcEE
Confidence 899999999984 45667776654431 12246678899999999999999999988 6778
Q ss_pred eEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCC--CeEEccccccccC
Q 014484 61 LLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG--NPRLSSFGLMKNS 138 (423)
Q Consensus 61 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~--~~kl~Dfg~~~~~ 138 (423)
++||||+ |++|.+++.. .+.+++..++.++.||+.||.|||+++ |+||||||+|||++.++ .+||+|||+++..
T Consensus 128 ~lv~e~~-~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~~~kL~Dfg~a~~~ 203 (345)
T 2v62_A 128 FMVMERL-GIDLQKISGQ--NGTFKKSTVLQLGIRMLDVLEYIHENE-YVHGDIKAANLLLGYKNPDQVYLADYGLSYRY 203 (345)
T ss_dssp EEEEECE-EEEHHHHCBG--GGBCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEESSSTTSEEECCCTTCEES
T ss_pred EEEEecc-CCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCcCHHHEEEccCCCCcEEEEeCCCceec
Confidence 9999999 9999999964 337999999999999999999999999 99999999999998877 9999999999765
Q ss_pred CCC-----------CccccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhc----cc
Q 014484 139 RDG-----------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLM----DS 203 (423)
Q Consensus 139 ~~~-----------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~----~~ 203 (423)
... ....||+.|+|||++.+..++.++|||||||++|+|++|..||................. ..
T Consensus 204 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 283 (345)
T 2v62_A 204 CPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQ 283 (345)
T ss_dssp SGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHHHHHHHHTTTH
T ss_pred ccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHHHHhhcccccH
Confidence 321 234689999999999988899999999999999999999999865321111111111111 11
Q ss_pred cccCC-CChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhh
Q 014484 204 ALEGH-FSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQK 247 (423)
Q Consensus 204 ~~~~~-~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~~~ 247 (423)
..... ....+++++.+++.+||+.||.+|||++++++.|+.+..
T Consensus 284 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 284 SVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp HHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred HHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 00000 011456789999999999999999999999999987543
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-42 Score=347.50 Aligned_cols=238 Identities=18% Similarity=0.235 Sum_probs=198.3
Q ss_pred CCCCccceeeee----cceeeeeecCCChh---hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF----HCHLKSSVLESSDL---GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~----~~~~~~~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||++.+. +..+++|++..... ....+.+|++++..++|||||++++++.. +..++||||+++|+|.+
T Consensus 380 G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~g~L~~ 458 (635)
T 4fl3_A 380 GNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNK 458 (635)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTTEEHHH
T ss_pred CCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCCCCHHH
Confidence 899999999773 45688888765432 35789999999999999999999999964 55889999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC-------ccccC
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-------SYSTN 147 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-------~~~~t 147 (423)
++.. .+.+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++...... ...+|
T Consensus 459 ~l~~--~~~l~~~~~~~i~~qi~~~L~yLH~~~-iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~t 535 (635)
T 4fl3_A 459 YLQQ--NRHVKDKNIIELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 535 (635)
T ss_dssp HHHH--CTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------------C
T ss_pred HHhh--CCCCCHHHHHHHHHHHHHHHHHHHHCC-EeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccccCCCCc
Confidence 9964 457999999999999999999999999 9999999999999999999999999998654332 22356
Q ss_pred cccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcc
Q 014484 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (423)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (423)
+.|+|||++.+..++.++|||||||++|||++ |..||..... ..+...+........+..+++++.++|.+||+
T Consensus 536 ~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~-----~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~ 610 (635)
T 4fl3_A 536 VKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG-----SEVTAMLEKGERMGCPAGCPREMYDLMNLCWT 610 (635)
T ss_dssp GGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH-----HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTC
T ss_pred eeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcC
Confidence 78999999998899999999999999999998 9988876422 22233333334445666788999999999999
Q ss_pred cCcCCCCCHHHHHHHHHhhhhh
Q 014484 227 SEARERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 227 ~dp~~Rps~~~vl~~l~~~~~~ 248 (423)
.||++|||++++++.|..+...
T Consensus 611 ~dP~~RPs~~~l~~~L~~~~~~ 632 (635)
T 4fl3_A 611 YDVENRPGFAAVELRLRNYYYD 632 (635)
T ss_dssp SSTTTSCCHHHHHHHHHHHHHH
T ss_pred CCHhHCcCHHHHHHHHHHHHHH
Confidence 9999999999999999876543
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-41 Score=312.61 Aligned_cols=233 Identities=16% Similarity=0.180 Sum_probs=175.3
Q ss_pred CCCCccceeee--ecceeeeeecCCChh----hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICW--FHCHLKSSVLESSDL----GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~--~~~~~~~~~~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.+ .+..+++|++..... ....+.+|+.++..++||||+++++++.+.+..++||||+++++|.++
T Consensus 22 G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 101 (278)
T 3cok_A 22 GSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRY 101 (278)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEECCTTEEHHHH
T ss_pred CCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEecCCCCcHHHH
Confidence 89999999987 467788888754332 236788999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccC
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFT 151 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~ 151 (423)
+.. ....+++..++.++.|++.||.|||+++ ++||||||+||+++.++.++|+|||++...... ....+|+.|+
T Consensus 102 l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~ 179 (278)
T 3cok_A 102 LKN-RVKPFSENEARHFMHQIITGMLYLHSHG-ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYI 179 (278)
T ss_dssp HHT-CSSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSSCCGGGEEECTTCCEEECCCTTCEECC----------------
T ss_pred Hhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCCEEEEeecceeeccCCCCcceeccCCCCcC
Confidence 964 3457999999999999999999999999 999999999999999999999999998865532 2356899999
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCC
Q 014484 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARE 231 (423)
Q Consensus 152 aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (423)
|||.+.+..++.++|||||||++|+|++|..||........ ...... .....+..++.++.++|.+||+.||.+
T Consensus 180 aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~----~~~~~~--~~~~~~~~~~~~~~~li~~~l~~dp~~ 253 (278)
T 3cok_A 180 SPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT----LNKVVL--ADYEMPSFLSIEAKDLIHQLLRRNPAD 253 (278)
T ss_dssp ------------CTHHHHHHHHHHHHHHSSCSSCCCSCC---------CCS--SCCCCCTTSCHHHHHHHHHHSCSSGGG
T ss_pred CcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH----HHHHhh--cccCCccccCHHHHHHHHHHcccCHhh
Confidence 99999988899999999999999999999988865421111 111111 111244556788999999999999999
Q ss_pred CCCHHHHHHHH
Q 014484 232 RPNAKSLVISL 242 (423)
Q Consensus 232 Rps~~~vl~~l 242 (423)
|||++++++|.
T Consensus 254 Rps~~~~l~h~ 264 (278)
T 3cok_A 254 RLSLSSVLDHP 264 (278)
T ss_dssp SCCHHHHTTST
T ss_pred CCCHHHHhcCc
Confidence 99999999774
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-41 Score=310.22 Aligned_cols=233 Identities=16% Similarity=0.174 Sum_probs=192.3
Q ss_pred CCCCccceeeee--cceeeeeecCCCh-hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
|+||.||.+.+. +..+++|.+.... ...+.+.+|++++..++||||+++++++.+++..++||||+++++|.+++..
T Consensus 20 G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~ 99 (277)
T 3f3z_A 20 GSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVH 99 (277)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHH
T ss_pred cCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccCCCcHHHHHHH
Confidence 899999999885 4456776664432 3467889999999999999999999999999999999999999999998864
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeee---cCCCCeEEccccccccCCCC---CccccCcccCC
Q 014484 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILF---DKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTP 152 (423)
Q Consensus 79 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~---~~~~~t~~y~a 152 (423)
.+.+++..++.++.|++.||.|||+++ ++||||||+||++ +.++.++|+|||++...... ....+|+.|+|
T Consensus 100 --~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~t~~y~a 176 (277)
T 3f3z_A 100 --KRVFRESDAARIMKDVLSAVAYCHKLN-VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVS 176 (277)
T ss_dssp --HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSCBCCCCSCTTTCC
T ss_pred --cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccchhccCCCCCccC
Confidence 456999999999999999999999999 9999999999999 78889999999999765543 34568999999
Q ss_pred ccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCCh----hHHHHHHHHHHHhcccC
Q 014484 153 PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSN----DEGTELVRLASRCLQSE 228 (423)
Q Consensus 153 PE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~li~~cl~~d 228 (423)
||.+.+ .++.++|||||||++|+|++|..||......... ....... ..++. .+++++.++|.+||+.|
T Consensus 177 PE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~----~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~d 249 (277)
T 3f3z_A 177 PQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVM----LKIREGT--FTFPEKDWLNVSPQAESLIRRLLTKS 249 (277)
T ss_dssp HHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHHCC--CCCCHHHHTTSCHHHHHHHHHHTCSS
T ss_pred hHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHH----HHHHhCC--CCCCchhhhcCCHHHHHHHHHHccCC
Confidence 999875 4899999999999999999999998764322111 1111111 11222 35778999999999999
Q ss_pred cCCCCCHHHHHHHHHh
Q 014484 229 ARERPNAKSLVISLMS 244 (423)
Q Consensus 229 p~~Rps~~~vl~~l~~ 244 (423)
|.+|||+.++++|..-
T Consensus 250 p~~R~s~~~~l~h~~~ 265 (277)
T 3f3z_A 250 PKQRITSLQALEHEWF 265 (277)
T ss_dssp TTTSCCHHHHTTSHHH
T ss_pred hhhCcCHHHHhcCHHH
Confidence 9999999999988554
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-41 Score=310.73 Aligned_cols=238 Identities=14% Similarity=0.151 Sum_probs=195.9
Q ss_pred CCCCccceeeee--cceeeeeecCCCh---hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
|+||.||.+.+. +..+++|++.... .....+.+|+.+++.++||||+++++++..++..++||||++|++|.+++
T Consensus 17 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~ 96 (284)
T 3kk8_A 17 GAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI 96 (284)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHH
T ss_pred cCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEecCCCCCHHHHH
Confidence 899999999875 6778888775433 34567889999999999999999999999999999999999999999888
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCC---eEEccccccccCCCCC---ccccCccc
Q 014484 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGN---PRLSSFGLMKNSRDGK---SYSTNLAF 150 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~---~kl~Dfg~~~~~~~~~---~~~~t~~y 150 (423)
.. ...+++..+..++.|++.||.|||+++ ++||||||+||+++.++. ++|+|||++....... ...||+.|
T Consensus 97 ~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y 173 (284)
T 3kk8_A 97 VA--REFYSEADASHCIQQILESIAYCHSNG-IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGY 173 (284)
T ss_dssp HH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSCBCCCSCSCGGG
T ss_pred Hh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCccccCCCCCcCC
Confidence 64 456999999999999999999999999 999999999999976655 9999999997665443 35689999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcC
Q 014484 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (423)
Q Consensus 151 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (423)
+|||.+.+..++.++||||||+++|+|++|..||................ ..........+++++.+++.+||+.||.
T Consensus 174 ~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~dp~ 251 (284)
T 3kk8_A 174 LSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGA--YDYPSPEWDTVTPEAKSLIDSMLTVNPK 251 (284)
T ss_dssp CCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC--CCCCTTTTTTSCHHHHHHHHHHSCSSTT
T ss_pred cCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhcc--ccCCchhhcccCHHHHHHHHHHcccChh
Confidence 99999999899999999999999999999999987653222211111111 1111112235678899999999999999
Q ss_pred CCCCHHHHHHHHHh
Q 014484 231 ERPNAKSLVISLMS 244 (423)
Q Consensus 231 ~Rps~~~vl~~l~~ 244 (423)
+|||++++++|..-
T Consensus 252 ~Rps~~~~l~h~~~ 265 (284)
T 3kk8_A 252 KRITADQALKVPWI 265 (284)
T ss_dssp TSCCHHHHTTSHHH
T ss_pred hCCCHHHHhcCccc
Confidence 99999999988654
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-41 Score=338.06 Aligned_cols=238 Identities=16% Similarity=0.222 Sum_probs=197.2
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.+. +..+++|++.... .....+.+|+.++..++||||+++++++.+.+..|+||||++||+|.++
T Consensus 196 G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~gg~L~~~ 275 (543)
T 3c4z_A 196 GGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYH 275 (543)
T ss_dssp CSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHH
T ss_pred CCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEeccCCCHHHH
Confidence 899999999884 6778888875543 2345788999999999999999999999999999999999999999999
Q ss_pred hccCC--CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcc
Q 014484 76 LFHWE--TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLA 149 (423)
Q Consensus 76 i~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~ 149 (423)
+.... ...+++..+..++.||+.||.|||+++ |+||||||+|||++.+|++||+|||+++..... ....||+.
T Consensus 276 l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g-IvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~~~~~~~GT~~ 354 (543)
T 3c4z_A 276 IYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN-IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPG 354 (543)
T ss_dssp HHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCCBCCCCSCTT
T ss_pred HHHhhcccccccHHHHHHHHHHHHHHHHHHHHcC-CcccCCChHHEEEeCCCCEEEeecceeeeccCCCcccccccCCcc
Confidence 86432 446999999999999999999999999 999999999999999999999999999876543 23478999
Q ss_pred cCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCc
Q 014484 150 FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEA 229 (423)
Q Consensus 150 y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 229 (423)
|+|||++.+..++.++|||||||++|||++|..||...............+.. ....++..+++++.++|.+||+.||
T Consensus 355 Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~--~~~~~p~~~s~~~~~li~~lL~~dP 432 (543)
T 3c4z_A 355 FMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLE--QAVTYPDKFSPASKDFCEALLQKDP 432 (543)
T ss_dssp TSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHH--CCCCCCTTSCHHHHHHHHHHSCSSG
T ss_pred ccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhh--cccCCCcccCHHHHHHHHHhccCCH
Confidence 99999999989999999999999999999999998764211001111111111 1223556678899999999999999
Q ss_pred CCCCCH-----HHHHHHH
Q 014484 230 RERPNA-----KSLVISL 242 (423)
Q Consensus 230 ~~Rps~-----~~vl~~l 242 (423)
.+||++ +++++|.
T Consensus 433 ~~R~~~~~~~a~ei~~Hp 450 (543)
T 3c4z_A 433 EKRLGFRDGSCDGLRTHP 450 (543)
T ss_dssp GGSCCCBTTBSHHHHTSG
T ss_pred hHCCCCcccCHHHHHcCc
Confidence 999964 7888764
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-41 Score=332.96 Aligned_cols=236 Identities=14% Similarity=0.144 Sum_probs=183.8
Q ss_pred CCCCccceeeee--cceeeeeecCCC---hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCC------ceeEEEecCCCC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEAD------ERLLVAEFMPNE 70 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------~~~lv~e~~~~~ 70 (423)
|+||.||.+.+. +..+++|++... ......+.+|+.+++.++||||+++++++.... ..|+||||+.+
T Consensus 73 G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~E~~~~- 151 (464)
T 3ttj_A 73 GAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA- 151 (464)
T ss_dssp CSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEEECCSE-
T ss_pred CCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEEEEEeCCCC-
Confidence 899999999874 677888887653 334667889999999999999999999997654 46999999976
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC---CccccC
Q 014484 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTN 147 (423)
Q Consensus 71 ~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~~t 147 (423)
+|.+.+. ..+++..+..++.||+.||.|||++| |+||||||+|||++.++.+||+|||+++..... ....||
T Consensus 152 ~l~~~~~----~~l~~~~~~~~~~qil~aL~~lH~~~-iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~gt 226 (464)
T 3ttj_A 152 NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVT 226 (464)
T ss_dssp EHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCCCC-----CCCC----CC
T ss_pred CHHHHHh----hcCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChHhEEEeCCCCEEEEEEEeeeecCCCcccCCCccc
Confidence 5777773 34999999999999999999999999 999999999999999999999999999876543 345789
Q ss_pred cccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhh----------------------------
Q 014484 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLL---------------------------- 199 (423)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~---------------------------- 199 (423)
+.|+|||++.+..++.++|||||||++|||++|..||.+.............
T Consensus 227 ~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~ 306 (464)
T 3ttj_A 227 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAG 306 (464)
T ss_dssp CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCC
T ss_pred ccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCC
Confidence 9999999999999999999999999999999999998764321111100000
Q ss_pred -----hccccccCCC---ChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 200 -----LMDSALEGHF---SNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 200 -----~~~~~~~~~~---~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
.......... ....++++.+||.+||+.||.+|||++++++|..
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~ 358 (464)
T 3ttj_A 307 LTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 358 (464)
T ss_dssp CCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTT
T ss_pred CChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChh
Confidence 0000000000 0112678999999999999999999999998854
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-41 Score=323.16 Aligned_cols=237 Identities=18% Similarity=0.117 Sum_probs=188.6
Q ss_pred CCCCccceeeee--cceeeeeecCCC------hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHH
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS------DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLA 73 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 73 (423)
|+||.||.+.+. +..+++|++... ......+.+|++++..++||||+++++++.+.+..++||||++||+|.
T Consensus 37 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~ 116 (345)
T 3hko_A 37 GSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLL 116 (345)
T ss_dssp CSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHH
T ss_pred cCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEEEEeCCCCCcHH
Confidence 899999999874 556777776443 234568899999999999999999999999999999999999999999
Q ss_pred hhhccC--------------------------------------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCC
Q 014484 74 KHLFHW--------------------------------------ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLN 115 (423)
Q Consensus 74 ~~i~~~--------------------------------------~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlk 115 (423)
+++... ....+++..++.++.||+.||.|||+++ |+|||||
T Consensus 117 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlk 195 (345)
T 3hko_A 117 DKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQG-ICHRDIK 195 (345)
T ss_dssp HHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHTT-EECCCCC
T ss_pred HHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC-ccccCCC
Confidence 998410 0112467788999999999999999999 9999999
Q ss_pred CCCeeecCCC--CeEEccccccccCCC--------CCccccCcccCCcccccc--CCCCCCcceehhHHHHHHHhhCCCC
Q 014484 116 AYRILFDKDG--NPRLSSFGLMKNSRD--------GKSYSTNLAFTPPEYMRT--GRVTPESVVYSFGTMLLDLLSGKHI 183 (423)
Q Consensus 116 p~Nill~~~~--~~kl~Dfg~~~~~~~--------~~~~~~t~~y~aPE~~~~--~~~~~~~Di~slG~~l~el~~g~~~ 183 (423)
|+||+++.++ .+||+|||+++.... .....||+.|+|||.+.+ ..++.++|||||||++|+|++|..|
T Consensus 196 p~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~p 275 (345)
T 3hko_A 196 PENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVP 275 (345)
T ss_dssp GGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred hhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence 9999998776 899999999975432 234568999999999875 5689999999999999999999999
Q ss_pred CCchhhHHhhhchhhhhccccccCC--CChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 184 PPSHALDLIRSKNFLLLMDSALEGH--FSNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
|........ ............ ....+++++.++|.+||+.||.+|||+.++++|..
T Consensus 276 f~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~ 333 (345)
T 3hko_A 276 FPGVNDADT----ISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPW 333 (345)
T ss_dssp SCCSSHHHH----HHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHH
T ss_pred CCCCChHHH----HHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhcChh
Confidence 876432221 112222111111 11235788999999999999999999999998854
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-41 Score=322.12 Aligned_cols=231 Identities=19% Similarity=0.202 Sum_probs=184.4
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHH-HhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKA-VGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~-l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||.+.+. +..+++|++.+.. .....+.+|..+ ++.++||||+++++++.+.+..|+||||++||+|.+
T Consensus 49 G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~ 128 (373)
T 2r5t_A 49 GSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFY 128 (373)
T ss_dssp CTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHH
T ss_pred CCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEEeCCCCCcHHH
Confidence 899999999985 5667888775543 234456677776 567899999999999999999999999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCC----CCCccccCccc
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSR----DGKSYSTNLAF 150 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~----~~~~~~~t~~y 150 (423)
++.+ .+.+++..+..++.||+.||.|||+++ |+||||||+|||++.+|++||+|||+++... ......||+.|
T Consensus 129 ~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~~~~~~~~gt~~y 205 (373)
T 2r5t_A 129 HLQR--ERCFLEPRARFYAAEIASALGYLHSLN-IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEY 205 (373)
T ss_dssp HHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCCCCCCSBSCCCCC
T ss_pred HHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCHHHEEECCCCCEEEeeCccccccccCCCccccccCCccc
Confidence 9964 456999999999999999999999999 9999999999999999999999999998532 23456789999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcC
Q 014484 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (423)
Q Consensus 151 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (423)
+|||++.+..++.++|||||||++|||++|..||......... ..+... ...++..++.++.++|.+||+.||.
T Consensus 206 ~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~----~~i~~~--~~~~~~~~~~~~~~li~~lL~~dp~ 279 (373)
T 2r5t_A 206 LAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMY----DNILNK--PLQLKPNITNSARHLLEGLLQKDRT 279 (373)
T ss_dssp CCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHH----HHHHHS--CCCCCSSSCHHHHHHHHHHTCSSGG
T ss_pred cCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHH----HHHHhc--ccCCCCCCCHHHHHHHHHHcccCHH
Confidence 9999999989999999999999999999999998765322221 112211 1234556778899999999999999
Q ss_pred CCCCHH----HHHHH
Q 014484 231 ERPNAK----SLVIS 241 (423)
Q Consensus 231 ~Rps~~----~vl~~ 241 (423)
+||++. ++++|
T Consensus 280 ~R~~~~~~~~~i~~h 294 (373)
T 2r5t_A 280 KRLGAKDDFMEIKSH 294 (373)
T ss_dssp GSTTTTTTHHHHHTS
T ss_pred hCCCCCCCHHHHhCC
Confidence 999974 55544
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-41 Score=313.86 Aligned_cols=242 Identities=15% Similarity=0.174 Sum_probs=190.9
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.+. +..+++|++.... .....+.+|+.++..++||||+++++++..++..++||||++|++|.++
T Consensus 45 G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 124 (309)
T 2h34_A 45 GGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMRLINGVDLAAM 124 (309)
T ss_dssp CSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCCCEEHHHH
T ss_pred CCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEEecCCCCHHHH
Confidence 899999999874 6778888875543 2346788999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-----CccccCccc
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYSTNLAF 150 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~~t~~y 150 (423)
+.. .+.+++..++.++.|++.||.|||+++ |+||||||+||+++.++.++|+|||++...... ....+++.|
T Consensus 125 l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y 201 (309)
T 2h34_A 125 LRR--QGPLAPPRAVAIVRQIGSALDAAHAAG-ATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYY 201 (309)
T ss_dssp HHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECSCCC----------------CCGGG
T ss_pred HHh--cCCCCHHHHHHHHHHHHHHHHHHHHCc-CCcCCCChHHEEEcCCCCEEEecCccCccccccccccccccCCCcCc
Confidence 964 356999999999999999999999999 999999999999999999999999998765433 234688999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcC
Q 014484 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (423)
Q Consensus 151 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (423)
+|||.+.+..++.++||||||+++|+|++|..||.......... ...... ......+..+++++.++|.+||+.||.
T Consensus 202 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~l~~li~~~l~~dP~ 278 (309)
T 2h34_A 202 MAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGA-HINQAI--PRPSTVRPGIPVAFDAVIARGMAKNPE 278 (309)
T ss_dssp CCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHH-HHHSCC--CCGGGTSTTCCTHHHHHHHHHTCSSGG
T ss_pred cCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHH-HhccCC--CCccccCCCCCHHHHHHHHHhccCCHH
Confidence 99999998889999999999999999999999987653321111 111111 111123445677899999999999999
Q ss_pred CCC-CHHHHHHHHHhhhhhc
Q 014484 231 ERP-NAKSLVISLMSLQKEA 249 (423)
Q Consensus 231 ~Rp-s~~~vl~~l~~~~~~~ 249 (423)
+|| |++++++.|+......
T Consensus 279 ~Rp~s~~~l~~~l~~~l~~~ 298 (309)
T 2h34_A 279 DRYVTCGDLSAAAHAALATA 298 (309)
T ss_dssp GSCSSHHHHHHHHHHTCC--
T ss_pred HHHHhHHHHHHHHHHHHHhh
Confidence 999 9999999998876553
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-41 Score=319.12 Aligned_cols=237 Identities=13% Similarity=0.164 Sum_probs=191.2
Q ss_pred CCCCccceeee--ecceeeeeecCCChhhHHHHHHHHHHHhcC-CCCCccceEeEEEe------CCceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNL-RSERLANLIGCCYE------ADERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~--~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~------~~~~~lv~e~~~~~~L 72 (423)
|+||.||.+.+ .+..+++|++.........+.+|+.++..+ +||||+++++++.. .+..++||||+++++|
T Consensus 35 G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L 114 (326)
T 2x7f_A 35 GTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSV 114 (326)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEEECCTTEEH
T ss_pred CCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEEEcCCCCcH
Confidence 89999999998 477888888876666678899999999999 89999999999987 4578999999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCc
Q 014484 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNL 148 (423)
Q Consensus 73 ~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~ 148 (423)
.+++....+..+++..++.++.||+.||.|||+++ ++||||||+||+++.++.++|+|||++...... ....+|+
T Consensus 115 ~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~ 193 (326)
T 2x7f_A 115 TDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK-VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTP 193 (326)
T ss_dssp HHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEECTTCCEEECCCTTTC-------------CCG
T ss_pred HHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCcHHHEEEcCCCCEEEeeCcCceecCcCccccccccCCc
Confidence 99997655567999999999999999999999999 999999999999999999999999998765432 3456899
Q ss_pred ccCCccccc-----cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHH
Q 014484 149 AFTPPEYMR-----TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASR 223 (423)
Q Consensus 149 ~y~aPE~~~-----~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 223 (423)
.|+|||.+. +..++.++|||||||++|+|++|..||........ .............+..++..+.++|.+
T Consensus 194 ~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~li~~ 269 (326)
T 2x7f_A 194 YWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRA----LFLIPRNPAPRLKSKKWSKKFQSFIES 269 (326)
T ss_dssp GGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH----HHHHHHSCCCCCSCSCSCHHHHHHHHH
T ss_pred cccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHH----HHHhhcCccccCCccccCHHHHHHHHH
Confidence 999999987 45689999999999999999999988865321111 111111111222234567889999999
Q ss_pred hcccCcCCCCCHHHHHHHHH
Q 014484 224 CLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 224 cl~~dp~~Rps~~~vl~~l~ 243 (423)
||..||.+|||++++++|..
T Consensus 270 ~l~~dp~~Rps~~~ll~hp~ 289 (326)
T 2x7f_A 270 CLVKNHSQRPATEQLMKHPF 289 (326)
T ss_dssp HCCSSGGGSCCHHHHHTSHH
T ss_pred HhccChhhCCCHHHHhhChH
Confidence 99999999999999998743
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-41 Score=317.89 Aligned_cols=245 Identities=18% Similarity=0.292 Sum_probs=199.1
Q ss_pred CCCCccceeee------ecceeeeeecCCCh-hhHHHHHHHHHHHhcCCCCCccceEeEEEeCC--ceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICW------FHCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEAD--ERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~------~~~~~~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv~e~~~~~~L 72 (423)
|+||.||.+.+ .+..+++|++.... .....+.+|+++++.++||||+++++++...+ ..++||||+++++|
T Consensus 52 G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L 131 (326)
T 2w1i_A 52 GNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 131 (326)
T ss_dssp CSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEEECCCTTCBH
T ss_pred CCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEEEECCCCCCH
Confidence 89999999985 36678888776543 34568899999999999999999999987654 68999999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC-------ccc
Q 014484 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-------SYS 145 (423)
Q Consensus 73 ~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-------~~~ 145 (423)
.+++.. ....+++..++.++.|++.||.|||+++ |+||||||+||+++.++.++|+|||+++...... ...
T Consensus 132 ~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~ 209 (326)
T 2w1i_A 132 RDYLQK-HKERIDHIKLLQYTSQICKGMEYLGTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGE 209 (326)
T ss_dssp HHHHHH-STTSSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEEEETTEEEECCCTTCEECCSSCSEEECSSCCS
T ss_pred HHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC-EeccCCCcceEEEcCCCcEEEecCcchhhccccccccccccCCC
Confidence 999965 3356999999999999999999999999 9999999999999999999999999998765432 234
Q ss_pred cCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhh-----------hchhhhhccccccCCCChhHH
Q 014484 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIR-----------SKNFLLLMDSALEGHFSNDEG 214 (423)
Q Consensus 146 ~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~ 214 (423)
++..|+|||.+.+..++.++|||||||++|+|+||..|+......... ...+...+........+..++
T Consensus 210 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (326)
T 2w1i_A 210 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCP 289 (326)
T ss_dssp CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCC
T ss_pred CceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcCCCCCCCCccc
Confidence 677899999999888999999999999999999999776543211110 011122222222334456678
Q ss_pred HHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhhh
Q 014484 215 TELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 215 ~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~~~~ 248 (423)
.++.++|.+||+.||.+|||+.++++.|+.+...
T Consensus 290 ~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~ 323 (326)
T 2w1i_A 290 DEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323 (326)
T ss_dssp HHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999988764
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-41 Score=310.28 Aligned_cols=234 Identities=18% Similarity=0.203 Sum_probs=196.4
Q ss_pred CCCCccceeeee--cceeeeeecCCChh----hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDL----GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.+. +..+++|++..... ....+.+|++++..++||||+++++++.+++..++||||+++++|.++
T Consensus 25 G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 104 (284)
T 2vgo_A 25 GKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKE 104 (284)
T ss_dssp CSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHH
T ss_pred CCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEEeCCCCcHHHH
Confidence 899999999885 55677777644321 245788999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC--CccccCcccCCc
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTNLAFTPP 153 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--~~~~~t~~y~aP 153 (423)
+.. .+.+++..++.++.|++.||.|||+++ ++||||||+||+++.++.++|+|||++...... ....|++.|+||
T Consensus 105 l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aP 181 (284)
T 2vgo_A 105 LQK--HGRFDEQRSATFMEELADALHYCHERK-VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRTMCGTLDYLPP 181 (284)
T ss_dssp HHH--HSSCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCSGGGEEECTTCCEEECCCTTCEECSSSCBCCCCSCGGGCCH
T ss_pred HHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCHHHEEEcCCCCEEEecccccccCcccccccccCCCCcCCH
Confidence 964 346999999999999999999999999 999999999999999999999999998765432 345689999999
Q ss_pred cccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCC
Q 014484 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERP 233 (423)
Q Consensus 154 E~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 233 (423)
|.+.+..++.++||||||+++|+|++|..||.......... .... ....++..++.++.++|.+||+.||.+||
T Consensus 182 E~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~----~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 255 (284)
T 2vgo_A 182 EMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHR----RIVN--VDLKFPPFLSDGSKDLISKLLRYHPPQRL 255 (284)
T ss_dssp HHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH----HHHT--TCCCCCTTSCHHHHHHHHHHSCSSGGGSC
T ss_pred HHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHH----HHhc--cccCCCCcCCHHHHHHHHHHhhcCHhhCC
Confidence 99998889999999999999999999999887543222111 1111 12234556678899999999999999999
Q ss_pred CHHHHHHHHHh
Q 014484 234 NAKSLVISLMS 244 (423)
Q Consensus 234 s~~~vl~~l~~ 244 (423)
|++++++|..-
T Consensus 256 s~~~ll~h~~~ 266 (284)
T 2vgo_A 256 PLKGVMEHPWV 266 (284)
T ss_dssp CHHHHHTCHHH
T ss_pred CHHHHhhCHHH
Confidence 99999988543
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-41 Score=322.68 Aligned_cols=236 Identities=17% Similarity=0.233 Sum_probs=191.5
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
|+||.||.+.+. +..+++|++..... ...+|++++.++ +||||+++++++.+++..|+||||++||+|.+++.+
T Consensus 33 G~~g~V~~~~~~~~~~~~avK~~~~~~~---~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~i~~ 109 (342)
T 2qr7_A 33 GSYSVCKRCIHKATNMEFAVKIIDKSKR---DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILR 109 (342)
T ss_dssp CSSEEEEEEEETTTTEEEEEEEEETTTC---CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHT
T ss_pred CCCEEEEEEEECCCCCEEEEEEEEcccC---ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCCCcHHHHHHH
Confidence 899999999985 67788888766543 345788999888 799999999999999999999999999999999864
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCC-C---CeEEccccccccCCCC----CccccCccc
Q 014484 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKD-G---NPRLSSFGLMKNSRDG----KSYSTNLAF 150 (423)
Q Consensus 79 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~-~---~~kl~Dfg~~~~~~~~----~~~~~t~~y 150 (423)
.+.+++..+..++.||+.||.|||++| |+||||||+|||+.+. + .+||+|||+++..... ....+|+.|
T Consensus 110 --~~~~~~~~~~~~~~qi~~al~~lH~~g-ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y 186 (342)
T 2qr7_A 110 --QKFFSEREASAVLFTITKTVEYLHAQG-VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANF 186 (342)
T ss_dssp --CTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTCCBCCSSCCSSC
T ss_pred --cCCCCHHHHHHHHHHHHHHHHHHHHCC-cEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCCceeccCCCccc
Confidence 457999999999999999999999999 9999999999998443 3 4999999999865433 345689999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccc--cccCCCChhHHHHHHHHHHHhcccC
Q 014484 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS--ALEGHFSNDEGTELVRLASRCLQSE 228 (423)
Q Consensus 151 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~cl~~d 228 (423)
+|||++.+..++.++|||||||++|+|++|..||...... ........+... .........+++++.+||.+||+.|
T Consensus 187 ~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~d 265 (342)
T 2qr7_A 187 VAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDD-TPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVD 265 (342)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTS-CHHHHHHHHHHCCCCCCSTTTTTSCHHHHHHHHHHTCSS
T ss_pred cCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcC-CHHHHHHHHccCCcccCccccccCCHHHHHHHHHHCCCC
Confidence 9999998888999999999999999999999988652111 000111111111 1122233457889999999999999
Q ss_pred cCCCCCHHHHHHHHHh
Q 014484 229 ARERPNAKSLVISLMS 244 (423)
Q Consensus 229 p~~Rps~~~vl~~l~~ 244 (423)
|.+|||+.++++|.+-
T Consensus 266 P~~R~t~~~il~hp~~ 281 (342)
T 2qr7_A 266 PHQRLTAALVLRHPWI 281 (342)
T ss_dssp TTTSCCHHHHTTSHHH
T ss_pred hhHCcCHHHHhcCCee
Confidence 9999999999998665
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-41 Score=329.90 Aligned_cols=241 Identities=14% Similarity=0.151 Sum_probs=196.2
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHHhcC------CCCCccceEeEEEeCCceeEEEecCCCCCHH
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNL------RSERLANLIGCCYEADERLLVAEFMPNETLA 73 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 73 (423)
|+||.||++.+. +..+++|++.........+.+|++++..+ +|+||+++++++...+..++||||+. ++|.
T Consensus 108 G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~-~~L~ 186 (429)
T 3kvw_A 108 GSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLS-MNLY 186 (429)
T ss_dssp SSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEECCCC-CBHH
T ss_pred CccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEEEeccC-CCHH
Confidence 899999999875 67899999888777777888899998887 56799999999999999999999996 5999
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCC--eEEccccccccCCCC-CccccCccc
Q 014484 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGN--PRLSSFGLMKNSRDG-KSYSTNLAF 150 (423)
Q Consensus 74 ~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~--~kl~Dfg~~~~~~~~-~~~~~t~~y 150 (423)
+++.......+++..+..++.||+.||.|||+++ |+||||||+|||++.++. +||+|||+++..... ....+|+.|
T Consensus 187 ~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~~~~~~~gt~~y 265 (429)
T 3kvw_A 187 ELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR-IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTYIQSRFY 265 (429)
T ss_dssp HHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHT-EECSCCSGGGEEESSTTSCCEEECCCTTCEETTCCCCSSCSCGGG
T ss_pred HHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEEccCCCcceEEeecccceecCCcccccCCCCCc
Confidence 9997655567999999999999999999999999 999999999999999887 999999999765543 446789999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhh-----------------hhccccc--------
Q 014484 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFL-----------------LLMDSAL-------- 205 (423)
Q Consensus 151 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~-----------------~~~~~~~-------- 205 (423)
+|||++.+..++.++|||||||++|||++|.+||.............. .......
T Consensus 266 ~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (429)
T 3kvw_A 266 RAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVT 345 (429)
T ss_dssp CCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEE
T ss_pred cChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCccccccc
Confidence 999999999999999999999999999999988876432211110000 0000000
Q ss_pred -------------------c-CC--------CChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHh
Q 014484 206 -------------------E-GH--------FSNDEGTELVRLASRCLQSEARERPNAKSLVISLMS 244 (423)
Q Consensus 206 -------------------~-~~--------~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~ 244 (423)
. .. ++...++++.+||.+||++||++|||++++++|.+-
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~ 412 (429)
T 3kvw_A 346 TLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWL 412 (429)
T ss_dssp CCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTT
T ss_pred ccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhCChhh
Confidence 0 00 011225779999999999999999999999988543
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-41 Score=317.88 Aligned_cols=239 Identities=15% Similarity=0.222 Sum_probs=186.4
Q ss_pred CCCCccceeeee--cceeeeeecCCChhh--HHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLG--ETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~ 77 (423)
|+||.||.+.+. +..+++|++...... ...+.+|+++++.++||||+++++++..++..++||||+.| +|.+++.
T Consensus 13 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~ 91 (324)
T 3mtl_A 13 GTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLD 91 (324)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCSE-EHHHHHH
T ss_pred CCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEeccccc-CHHHHHH
Confidence 899999999985 677888877544322 22456899999999999999999999999999999999975 9999886
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccCCc
Q 014484 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPP 153 (423)
Q Consensus 78 ~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~aP 153 (423)
. .+..+++..+..++.||+.||.|||++| |+||||||+||+++.++.+||+|||+++..... ....+|+.|+||
T Consensus 92 ~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aP 169 (324)
T 3mtl_A 92 D-CGNIINMHNVKLFLFQLLRGLAYCHRQK-VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPP 169 (324)
T ss_dssp H-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EEESSCCGGGEEECTTCCEEECSSSEEECC------------CGGGCCH
T ss_pred h-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCcCHHHEEECCCCCEEEccCcccccccCCccccccccCcccccCh
Confidence 5 3456999999999999999999999999 999999999999999999999999998765432 234679999999
Q ss_pred ccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCC------------------------
Q 014484 154 EYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGH------------------------ 208 (423)
Q Consensus 154 E~~~~-~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------ 208 (423)
|++.+ ..++.++|||||||++|+|++|..||............. ..........
T Consensus 170 E~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (324)
T 3mtl_A 170 DILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIF-RILGTPTEETWPGILSNEEFKTYNYPKYRAEALL 248 (324)
T ss_dssp HHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH-HHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHH
T ss_pred hhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-HHhCCCChHhchhhhcchhhcccccccccchhhh
Confidence 99876 468999999999999999999999987653222111111 1000000000
Q ss_pred -CChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHh
Q 014484 209 -FSNDEGTELVRLASRCLQSEARERPNAKSLVISLMS 244 (423)
Q Consensus 209 -~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~ 244 (423)
....+++++.+||.+||+.||.+|||++++++|.+-
T Consensus 249 ~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f 285 (324)
T 3mtl_A 249 SHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFF 285 (324)
T ss_dssp HHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGG
T ss_pred hhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhh
Confidence 012346789999999999999999999999988544
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-41 Score=320.79 Aligned_cols=236 Identities=18% Similarity=0.231 Sum_probs=191.2
Q ss_pred CCCCccceeeee-cceeeeeecCCC---hhhHHHHHHHHHHHhcCCC--CCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF-HCHLKSSVLESS---DLGETLNLEEAKAVGNLRS--ERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~-~~~~~~~~~~~~---~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.+. +..+++|++... ......+.+|+.++..++| |||+++++++..++..++|||+ .+++|.++
T Consensus 20 G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e~-~~~~L~~~ 98 (343)
T 3dbq_A 20 GGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMEC-GNIDLNSW 98 (343)
T ss_dssp CSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECC-CSEEHHHH
T ss_pred CCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEeC-CCCCHHHH
Confidence 899999999874 566788876543 3345678899999999976 9999999999999999999994 57799999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC------CccccCcc
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------KSYSTNLA 149 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~------~~~~~t~~ 149 (423)
+.. .+.+++..+..++.||+.||.|||+++ |+||||||+|||++ ++.+||+|||+++..... ....||+.
T Consensus 99 l~~--~~~~~~~~~~~i~~qi~~al~~lH~~~-iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~ 174 (343)
T 3dbq_A 99 LKK--KKSIDPWERKSYWKNMLEAVHTIHQHG-IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVN 174 (343)
T ss_dssp HHH--SCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEE-TTEEEECCCSSSCCC------------CCCCS
T ss_pred HHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCcceEEEE-CCcEEEeecccccccCcccccccCCCCcCCcC
Confidence 965 457999999999999999999999999 99999999999997 678999999999866433 23568999
Q ss_pred cCCcccccc-----------CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHH
Q 014484 150 FTPPEYMRT-----------GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELV 218 (423)
Q Consensus 150 y~aPE~~~~-----------~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 218 (423)
|+|||++.+ ..++.++|||||||++|+|++|..||...... ...............++...+.++.
T Consensus 175 y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~ 251 (343)
T 3dbq_A 175 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ---ISKLHAIIDPNHEIEFPDIPEKDLQ 251 (343)
T ss_dssp SCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSH---HHHHHHHHCTTSCCCCCCCSCHHHH
T ss_pred cCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhH---HHHHHHHhcCCcccCCcccCCHHHH
Confidence 999999865 56888999999999999999999988653211 1122333333444455556677899
Q ss_pred HHHHHhcccCcCCCCCHHHHHHHHHhh
Q 014484 219 RLASRCLQSEARERPNAKSLVISLMSL 245 (423)
Q Consensus 219 ~li~~cl~~dp~~Rps~~~vl~~l~~~ 245 (423)
+++.+||+.||.+|||+.++++|.+-.
T Consensus 252 ~li~~~L~~dp~~Rpt~~e~l~hp~~~ 278 (343)
T 3dbq_A 252 DVLKCCLKRDPKQRISIPELLAHPYVQ 278 (343)
T ss_dssp HHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred HHHHHHcCCChhHCCCHHHHHhCcccc
Confidence 999999999999999999999987653
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-41 Score=324.73 Aligned_cols=235 Identities=18% Similarity=0.236 Sum_probs=191.0
Q ss_pred CCCCccceeeee-cceeeeeecCCC---hhhHHHHHHHHHHHhcCC--CCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF-HCHLKSSVLESS---DLGETLNLEEAKAVGNLR--SERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~-~~~~~~~~~~~~---~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.+. +..+++|++... ......+.+|+.++..++ ||||+++++++..++..++||| +.+++|.++
T Consensus 67 G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E-~~~~~L~~~ 145 (390)
T 2zmd_A 67 GGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSW 145 (390)
T ss_dssp CSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-CCSEEHHHH
T ss_pred CCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-cCCCCHHHH
Confidence 899999999874 666788877443 334678899999999996 5999999999999999999999 567899999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC------CccccCcc
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------KSYSTNLA 149 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~------~~~~~t~~ 149 (423)
+.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++ ++.+||+|||+++..... ....||+.
T Consensus 146 l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~-ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~ 221 (390)
T 2zmd_A 146 LKK--KKSIDPWERKSYWKNMLEAVHTIHQHG-IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVN 221 (390)
T ss_dssp HHH--CSSCCHHHHHHHHHHHHHHHHHHHTTT-CCCCCCCGGGEEES-SSCEEECCCSSSCCC---------CCSCCCGG
T ss_pred HHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHEEEE-CCeEEEEecCccccccCCCccccCCCCCcCCC
Confidence 965 447899999999999999999999999 99999999999996 589999999999866432 24568999
Q ss_pred cCCcccccc-----------CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHH
Q 014484 150 FTPPEYMRT-----------GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELV 218 (423)
Q Consensus 150 y~aPE~~~~-----------~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 218 (423)
|+|||++.+ ..++.++|||||||++|+|++|..||...... ...+...........++...+.++.
T Consensus 222 y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (390)
T 2zmd_A 222 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ---ISKLHAIIDPNHEIEFPDIPEKDLQ 298 (390)
T ss_dssp GCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCH---HHHHHHHHCTTSCCCCCCCSCHHHH
T ss_pred ccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHH---HHHHHHHhCccccCCCCccchHHHH
Confidence 999999865 36888999999999999999999988653211 1122233333333344555577899
Q ss_pred HHHHHhcccCcCCCCCHHHHHHHHHh
Q 014484 219 RLASRCLQSEARERPNAKSLVISLMS 244 (423)
Q Consensus 219 ~li~~cl~~dp~~Rps~~~vl~~l~~ 244 (423)
+||.+||+.||.+|||+.++++|.+-
T Consensus 299 ~li~~~L~~dP~~Rps~~ell~hp~~ 324 (390)
T 2zmd_A 299 DVLKCCLKRDPKQRISIPELLAHPYV 324 (390)
T ss_dssp HHHHHHTCSSTTTSCCHHHHHTSHHH
T ss_pred HHHHHHcccChhhCCCHHHHhhCcCc
Confidence 99999999999999999999998654
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-41 Score=316.35 Aligned_cols=234 Identities=17% Similarity=0.180 Sum_probs=196.4
Q ss_pred CCCCccceeeee--cceeeeeecCCC----hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS----DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.+. +..+++|++... ......+.+|+.+++.++||||+++++++.+.+..++||||+.+++|.++
T Consensus 52 G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 131 (335)
T 2owb_A 52 GGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL 131 (335)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHH
T ss_pred CCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEecCCCCCHHHH
Confidence 899999999885 556777776443 34567788999999999999999999999999999999999999999998
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccC
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFT 151 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~ 151 (423)
+.. ...+++..++.++.||+.||.|||+++ |+||||||+||+++.++.++|+|||+++..... ....||+.|+
T Consensus 132 ~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~ 208 (335)
T 2owb_A 132 HKR--RKALTEPEARYYLRQIVLGCQYLHRNR-VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYI 208 (335)
T ss_dssp HHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCCSSC
T ss_pred Hhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CEecCCCchhEEEcCCCCEEEeeccCceecccCcccccccCCCcccc
Confidence 864 357999999999999999999999999 999999999999999999999999999865422 3356899999
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCC
Q 014484 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARE 231 (423)
Q Consensus 152 aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (423)
|||++.+..++.++|||||||++|+|++|..||......... ..... ....++..+++++.++|.+||+.||.+
T Consensus 209 aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~----~~~~~--~~~~~~~~~~~~~~~li~~~l~~dp~~ 282 (335)
T 2owb_A 209 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY----LRIKK--NEYSIPKHINPVAASLIQKMLQTDPTA 282 (335)
T ss_dssp CHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH----HHHHH--TCCCCCTTSCHHHHHHHHHHTCSSGGG
T ss_pred CHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHH----HHHhc--CCCCCCccCCHHHHHHHHHHccCChhH
Confidence 999999888999999999999999999999988764222111 11111 112344556788999999999999999
Q ss_pred CCCHHHHHHHHHh
Q 014484 232 RPNAKSLVISLMS 244 (423)
Q Consensus 232 Rps~~~vl~~l~~ 244 (423)
|||+++++++..-
T Consensus 283 Rps~~ell~~~~~ 295 (335)
T 2owb_A 283 RPTINELLNDEFF 295 (335)
T ss_dssp SCCGGGGGGSHHH
T ss_pred CcCHHHHhcCccc
Confidence 9999999988654
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-41 Score=315.45 Aligned_cols=239 Identities=17% Similarity=0.173 Sum_probs=188.6
Q ss_pred CCCCccceeeee--cceeeeeecCCChh---hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDL---GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
|+||.||.+.+. +..+++|++..... ....+.+|++++.+++||||+++++++...+..++||||+++++|.+++
T Consensus 14 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~ 93 (311)
T 4agu_A 14 GSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELD 93 (311)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHH
T ss_pred cCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEeCCCchHHHHH
Confidence 899999999985 67788887654432 3567789999999999999999999999999999999999999999988
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccCC
Q 014484 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTP 152 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~a 152 (423)
.. .+.+++..+..++.|++.||.|||++| |+||||||+||+++.++.++|+|||++...... ....+|+.|+|
T Consensus 94 ~~--~~~~~~~~~~~i~~~l~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~a 170 (311)
T 4agu_A 94 RY--QRGVPEHLVKSITWQTLQAVNFCHKHN-CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRS 170 (311)
T ss_dssp HT--SSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECC------------GGGCC
T ss_pred hh--hcCCCHHHHHHHHHHHHHHHHHHHHCC-CcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccccCCCcCCccccC
Confidence 53 456999999999999999999999999 999999999999999999999999999865533 33468899999
Q ss_pred cccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhc----------------cc-ccc--CCC---
Q 014484 153 PEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLM----------------DS-ALE--GHF--- 209 (423)
Q Consensus 153 PE~~~~-~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~----------------~~-~~~--~~~--- 209 (423)
||.+.+ ..++.++|||||||++|+|++|..||................. .. ... ...
T Consensus 171 PE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (311)
T 4agu_A 171 PELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPL 250 (311)
T ss_dssp HHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCH
T ss_pred hHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCcCCCccccchh
Confidence 999876 5689999999999999999999999876432211110000000 00 000 000
Q ss_pred ---ChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 210 ---SNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 210 ---~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
.+.+++++.+++.+||+.||.+|||++++++|..
T Consensus 251 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 287 (311)
T 4agu_A 251 ELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPY 287 (311)
T ss_dssp HHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGG
T ss_pred hhhcccccHHHHHHHHHHccCChhhcCCHHHHhcChH
Confidence 0235678999999999999999999999998743
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-41 Score=320.71 Aligned_cols=237 Identities=16% Similarity=0.191 Sum_probs=188.0
Q ss_pred CCCCccceeeee--cceeeeeecCCC---hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCC------ceeEEEecCCCC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEAD------ERLLVAEFMPNE 70 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------~~~lv~e~~~~~ 70 (423)
|+||.||.+.+. +..+++|.+... ......+.+|+++++.++||||+++++++.... ..|+||||+ ++
T Consensus 36 G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~e~~-~~ 114 (367)
T 1cm8_A 36 GAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GT 114 (367)
T ss_dssp ----CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEEECC-SE
T ss_pred cCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEEEEEecC-CC
Confidence 899999999874 778888887543 234567889999999999999999999998764 359999999 78
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-CccccCcc
Q 014484 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSYSTNLA 149 (423)
Q Consensus 71 ~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~~t~~ 149 (423)
+|.+++.. ..+++..+..++.||+.||.|||++| |+||||||+||+++.++.+||+|||+++..... ....+|+.
T Consensus 115 ~L~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~ 190 (367)
T 1cm8_A 115 DLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAAG-IIHRDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVVTRW 190 (367)
T ss_dssp EHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECCSSCCSSCSCGG
T ss_pred CHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCcCHHHEEEcCCCCEEEEeeecccccccccCcCcCCCC
Confidence 99999954 46999999999999999999999999 999999999999999999999999999876543 34578999
Q ss_pred cCCcccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhh----------------------hhcccc--
Q 014484 150 FTPPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFL----------------------LLMDSA-- 204 (423)
Q Consensus 150 y~aPE~~~~-~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~----------------------~~~~~~-- 204 (423)
|+|||++.+ ..++.++||||+||++++|++|..||.+............ ......
T Consensus 191 y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (367)
T 1cm8_A 191 YRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEK 270 (367)
T ss_dssp GCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCC
T ss_pred cCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCC
Confidence 999999887 6799999999999999999999999876422111110000 000000
Q ss_pred -ccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 205 -LEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 205 -~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
.........++++.+||.+||+.||.+|||++++++|..
T Consensus 271 ~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~ 310 (367)
T 1cm8_A 271 KDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPY 310 (367)
T ss_dssp CCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGG
T ss_pred CCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChH
Confidence 001122345788999999999999999999999998843
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-41 Score=325.83 Aligned_cols=235 Identities=18% Similarity=0.215 Sum_probs=183.0
Q ss_pred CCCCccceeeee--cceeeeeecCCC---hhhHHHHHHHHHHHhcCC-CCCccceEeEEEeCC--ceeEEEecCCCCCHH
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS---DLGETLNLEEAKAVGNLR-SERLANLIGCCYEAD--ERLLVAEFMPNETLA 73 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~--~~~lv~e~~~~~~L~ 73 (423)
|+||.||.+.+. +..+++|.+... ......+.+|+.++..+. ||||+++++++...+ ..|+||||+.+ +|.
T Consensus 20 G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~~~~-~L~ 98 (388)
T 3oz6_A 20 GAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYMET-DLH 98 (388)
T ss_dssp ----CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEECCSE-EHH
T ss_pred CCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEecccCc-CHH
Confidence 899999999874 677888877443 344667889999999996 999999999998654 68999999975 999
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCC-------------
Q 014484 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD------------- 140 (423)
Q Consensus 74 ~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~------------- 140 (423)
+++.. +.+++..+..++.||+.||.|||++| |+||||||+|||++.++.+||+|||+++....
T Consensus 99 ~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~ 174 (388)
T 3oz6_A 99 AVIRA---NILEPVHKQYVVYQLIKVIKYLHSGG-LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSIN 174 (388)
T ss_dssp HHHHH---TCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEESSSCCCCCCCGGGCCC
T ss_pred HHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCC-EEeCCCCHHHeEEcCCCCEEecCCccccccccccccccccccccc
Confidence 99853 46999999999999999999999999 99999999999999999999999999975432
Q ss_pred ------------CCccccCcccCCcccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccc----
Q 014484 141 ------------GKSYSTNLAFTPPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS---- 203 (423)
Q Consensus 141 ------------~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~---- 203 (423)
.....||+.|+|||++.+ ..++.++|||||||++|||++|.+||++........... .....
T Consensus 175 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~-~~~~~p~~~ 253 (388)
T 3oz6_A 175 ENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERII-GVIDFPSNE 253 (388)
T ss_dssp ---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH-HHHCCCCHH
T ss_pred ccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-HhcCCCCHH
Confidence 123468999999999886 568999999999999999999999987643221111110 00000
Q ss_pred --------------------------cccC------------CCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHH
Q 014484 204 --------------------------ALEG------------HFSNDEGTELVRLASRCLQSEARERPNAKSLVISL 242 (423)
Q Consensus 204 --------------------------~~~~------------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l 242 (423)
.... ..+..+++++.+|+.+||+.||.+|||++++++|.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~Hp 330 (388)
T 3oz6_A 254 DVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHP 330 (388)
T ss_dssp HHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTTST
T ss_pred HHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCHHHHhCCH
Confidence 0000 00113467899999999999999999999999884
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-41 Score=310.66 Aligned_cols=236 Identities=15% Similarity=0.162 Sum_probs=187.6
Q ss_pred CCCCccceeeee--cceeeeeecCCCh--hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~ 77 (423)
|+||.||.+.+. +..+++|.+.... .....+.+|+++++.++||||+++++++.+....++||||+++++|.+++.
T Consensus 33 G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~ 112 (285)
T 3is5_A 33 GAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIV 112 (285)
T ss_dssp CSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCSCCBHHHHHH
T ss_pred CCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeCCCCcHHHHHH
Confidence 899999999874 5667777664433 345788999999999999999999999999999999999999999999885
Q ss_pred cC--CCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeee---cCCCCeEEccccccccCCCC---CccccCcc
Q 014484 78 HW--ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILF---DKDGNPRLSSFGLMKNSRDG---KSYSTNLA 149 (423)
Q Consensus 78 ~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~---~~~~~t~~ 149 (423)
.. .+..+++..++.++.|++.||.|||+++ |+||||||+||++ +.++.++|+|||++...... ....+|+.
T Consensus 113 ~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~ 191 (285)
T 3is5_A 113 SAQARGKALSEGYVAELMKQMMNALAYFHSQH-VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTAL 191 (285)
T ss_dssp HHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEESSSSTTCCEEECCCCCCCC----------CTTGG
T ss_pred hhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC-EEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcccCcCcccccC
Confidence 32 2467999999999999999999999999 9999999999999 45678999999999765433 34568999
Q ss_pred cCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCc
Q 014484 150 FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEA 229 (423)
Q Consensus 150 y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 229 (423)
|+|||.+. ..++.++|||||||++|+|++|..||.............. .... ........++++.+++.+||+.||
T Consensus 192 y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~li~~~L~~dP 267 (285)
T 3is5_A 192 YMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATY--KEPN-YAVECRPLTPQAVDLLKQMLTKDP 267 (285)
T ss_dssp GCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH--CCCC-CCC--CCCCHHHHHHHHHHTCSCT
T ss_pred cCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhcc--CCcc-cccccCcCCHHHHHHHHHHccCCh
Confidence 99999886 5688999999999999999999999876533222211111 1111 111112356789999999999999
Q ss_pred CCCCCHHHHHHHH
Q 014484 230 RERPNAKSLVISL 242 (423)
Q Consensus 230 ~~Rps~~~vl~~l 242 (423)
.+|||+.++++|-
T Consensus 268 ~~Rps~~e~l~hp 280 (285)
T 3is5_A 268 ERRPSAAQVLHHE 280 (285)
T ss_dssp TTSCCHHHHHTSG
T ss_pred hhCcCHHHHhcCH
Confidence 9999999999763
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-41 Score=331.22 Aligned_cols=239 Identities=14% Similarity=0.139 Sum_probs=178.5
Q ss_pred CCCCccceeeee--cceeeeeecCCC---hhhHHHHHHHHHHHhcCCCCCccceEeEEEeC-----CceeEEEecCCCCC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEA-----DERLLVAEFMPNET 71 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~~~lv~e~~~~~~ 71 (423)
|+||.||++.+. +..+++|++... ......+.+|+++|..++||||+++++++... ..+|+||||+. ++
T Consensus 64 G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~-~~ 142 (458)
T 3rp9_A 64 GSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIAD-SD 142 (458)
T ss_dssp ----CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEECCCS-EE
T ss_pred cCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEEEEeccc-cc
Confidence 899999999874 677888877543 33456788999999999999999999999544 46899999985 69
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----------
Q 014484 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---------- 141 (423)
Q Consensus 72 L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---------- 141 (423)
|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 143 L~~~~~~--~~~l~~~~~~~~~~qi~~aL~~LH~~~-iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~ 219 (458)
T 3rp9_A 143 FKKLFRT--PVYLTELHIKTLLYNLLVGVKYVHSAG-ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPIS 219 (458)
T ss_dssp HHHHHHS--SCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTCCEEECCCTTCBCTTSCTTCCCCCC--
T ss_pred hhhhccc--CCCCCHHHHHHHHHHHHHHHHHHHhCC-cCCCCCChhhEEECCCCCEeecccccchhccCccccccccccC
Confidence 9999853 467999999999999999999999999 999999999999999999999999999865421
Q ss_pred ---------------------CccccCcccCCcccc-ccCCCCCCcceehhHHHHHHHhh-----------CCCCCCchh
Q 014484 142 ---------------------KSYSTNLAFTPPEYM-RTGRVTPESVVYSFGTMLLDLLS-----------GKHIPPSHA 188 (423)
Q Consensus 142 ---------------------~~~~~t~~y~aPE~~-~~~~~~~~~Di~slG~~l~el~~-----------g~~~~~~~~ 188 (423)
....||+.|+|||++ .+..++.++|||||||++|||++ |.++|++..
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~~~~~p~f~g~~ 299 (458)
T 3rp9_A 220 PREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSS 299 (458)
T ss_dssp -------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGGCCCSCC---
T ss_pred ccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccccccccccccCCCCc
Confidence 224579999999976 45669999999999999999998 566665432
Q ss_pred hHHhh----------------hch---hhh-----------------------hcccccc---CCCChhHHHHHHHHHHH
Q 014484 189 LDLIR----------------SKN---FLL-----------------------LMDSALE---GHFSNDEGTELVRLASR 223 (423)
Q Consensus 189 ~~~~~----------------~~~---~~~-----------------------~~~~~~~---~~~~~~~~~~l~~li~~ 223 (423)
..... ... +.. ....... ....+..++++.+||.+
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~ 379 (458)
T 3rp9_A 300 CFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKR 379 (458)
T ss_dssp -----------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTTSCHHHHHHHHH
T ss_pred cccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCCCCHHHHHHHHH
Confidence 10000 000 000 0000000 00112347889999999
Q ss_pred hcccCcCCCCCHHHHHHHHHh
Q 014484 224 CLQSEARERPNAKSLVISLMS 244 (423)
Q Consensus 224 cl~~dp~~Rps~~~vl~~l~~ 244 (423)
||+.||.+|||++++++|-.-
T Consensus 380 mL~~dP~~R~t~~e~L~Hp~f 400 (458)
T 3rp9_A 380 MLVFNPNKRITINECLAHPFF 400 (458)
T ss_dssp HSCSSTTTSCCHHHHHHSGGG
T ss_pred HhccCccccCCHHHHhcCHhh
Confidence 999999999999999998543
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-41 Score=321.94 Aligned_cols=243 Identities=18% Similarity=0.201 Sum_probs=186.3
Q ss_pred CCCCccceeeeecceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeC-----CceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEA-----DERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~~~lv~e~~~~~~L~~~i 76 (423)
|+||.||++.+.+..+++|++............|+..+..++||||+++++.+... ...++||||+++|+|.+++
T Consensus 24 G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l 103 (336)
T 3g2f_A 24 GRYGAVYKGSLDERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL 103 (336)
T ss_dssp CSSEEEEEEEETTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECCCTTCBHHHHH
T ss_pred CCCeEEEEEEECCeEEEEEEeeccchhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEecCCCCcHHHHH
Confidence 89999999998889999998865544333333444445568999999999866432 2468999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHcC---------CCeeeccCCCCCeeecCCCCeEEccccccccCCCC------
Q 014484 77 FHWETQPMKWAMRLRVALYLAQALEYCSSK---------GRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------ 141 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---------~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~------ 141 (423)
.. ...++..++.++.||+.||.|||++ + |+||||||+|||++.++.+||+|||+++.....
T Consensus 104 ~~---~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~-ivH~Dikp~Nill~~~~~~kL~DFG~a~~~~~~~~~~~~ 179 (336)
T 3g2f_A 104 SL---HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPA-ISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPG 179 (336)
T ss_dssp HH---CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCC-EECSSCSGGGEEECTTSCEEECCCTTCEECSSSSCC---
T ss_pred hh---cccchhHHHHHHHHHHHHHHHHHhhhccccccccc-eeecccccceEEEcCCCcEEEeeccceeecccccccCcc
Confidence 53 3468999999999999999999999 9 999999999999999999999999999765422
Q ss_pred ------CccccCcccCCcccccc-------CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHh---------h----hc
Q 014484 142 ------KSYSTNLAFTPPEYMRT-------GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLI---------R----SK 195 (423)
Q Consensus 142 ------~~~~~t~~y~aPE~~~~-------~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~---------~----~~ 195 (423)
....||+.|+|||++.+ ..++.++|||||||++|||++|..||........ . ..
T Consensus 180 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (336)
T 3g2f_A 180 EEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFE 259 (336)
T ss_dssp ------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHH
T ss_pred ccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHH
Confidence 23468999999999986 3567789999999999999999766533210000 0 00
Q ss_pred hhhh-hccccccCCCC------hhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhhh
Q 014484 196 NFLL-LMDSALEGHFS------NDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 196 ~~~~-~~~~~~~~~~~------~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~~~~ 248 (423)
.... .........++ ..+++++.++|.+||+.||++|||+.++++.|+.+...
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~ 319 (336)
T 3g2f_A 260 DMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMI 319 (336)
T ss_dssp HHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHH
Confidence 0000 01111111222 23677899999999999999999999999999988755
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-41 Score=312.61 Aligned_cols=240 Identities=18% Similarity=0.220 Sum_probs=190.1
Q ss_pred CCCCccceeeeec-----ceeeeeecCCC----hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICWFH-----CHLKSSVLESS----DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~~~-----~~~~~~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 72 (423)
|+||.||.+.+.. ..+++|++... ....+.+.+|++++..++||||+++++++.... .++||||+++++|
T Consensus 29 G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~v~e~~~~~~L 107 (291)
T 1u46_A 29 GSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSL 107 (291)
T ss_dssp ---CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CEEEEECCTTCBH
T ss_pred CCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ceeeEecccCCCH
Confidence 8999999998742 24677776543 234578899999999999999999999998765 8899999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC-------ccc
Q 014484 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-------SYS 145 (423)
Q Consensus 73 ~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-------~~~ 145 (423)
.+++... ...+++..++.++.|++.||.|||+++ ++||||||+||+++.++.++|+|||++....... ...
T Consensus 108 ~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~ 185 (291)
T 1u46_A 108 LDRLRKH-QGHFLLGTLSRYAVQVAEGMGYLESKR-FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 185 (291)
T ss_dssp HHHHHHH-GGGSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEEC-----
T ss_pred HHHHHhc-cCCcCHHHHHHHHHHHHHHHHHHHhCC-cccCCCchheEEEcCCCCEEEccccccccccccccchhhhccCC
Confidence 9999642 356999999999999999999999999 9999999999999999999999999988765432 234
Q ss_pred cCcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHh
Q 014484 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRC 224 (423)
Q Consensus 146 ~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 224 (423)
+|..|+|||.+.+..++.++||||||+++|+|++ |..||....... ..............+..++.++.+++.+|
T Consensus 186 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 261 (291)
T 1u46_A 186 VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ----ILHKIDKEGERLPRPEDCPQDIYNVMVQC 261 (291)
T ss_dssp CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH----HHHHHHTSCCCCCCCTTCCHHHHHHHHHH
T ss_pred CCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHH----HHHHHHccCCCCCCCcCcCHHHHHHHHHH
Confidence 6778999999998889999999999999999999 888876542221 11122222222334556788999999999
Q ss_pred cccCcCCCCCHHHHHHHHHhhhhh
Q 014484 225 LQSEARERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 225 l~~dp~~Rps~~~vl~~l~~~~~~ 248 (423)
|+.||.+|||+.+++++|..+...
T Consensus 262 l~~~p~~Rps~~~l~~~l~~~~~~ 285 (291)
T 1u46_A 262 WAHKPEDRPTFVALRDFLLEAQPT 285 (291)
T ss_dssp TCSSGGGSCCHHHHHHHHHHHC--
T ss_pred ccCCcccCcCHHHHHHHHHHhCcc
Confidence 999999999999999999877643
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-40 Score=308.57 Aligned_cols=234 Identities=17% Similarity=0.189 Sum_probs=196.4
Q ss_pred CCCCccceeeee--cceeeeeecCCC----hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS----DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.+. +..+++|++... ....+.+.+|+.+++.++||||+++++++.+++..++||||+++++|.++
T Consensus 26 G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 105 (294)
T 2rku_A 26 GGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL 105 (294)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHH
T ss_pred cCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEecCCCCCHHHH
Confidence 899999999985 566777776443 34466788999999999999999999999999999999999999999998
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccC
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFT 151 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~ 151 (423)
+.. .+.+++..++.++.|++.||.|||+++ ++||||||+||+++.++.++|+|||++...... ....+|+.|+
T Consensus 106 ~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~ 182 (294)
T 2rku_A 106 HKR--RKALTEPEARYYLRQIVLGCQYLHRNR-VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYI 182 (294)
T ss_dssp HHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCCSSC
T ss_pred HHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChHhEEEcCCCCEEEEeccCceecccCccccccccCCCCcC
Confidence 864 357999999999999999999999999 999999999999999999999999998765422 3346899999
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCC
Q 014484 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARE 231 (423)
Q Consensus 152 aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (423)
|||.+.+..++.++||||||+++|+|++|..||........ ...... .....+..+++.+.+++.+||+.||.+
T Consensus 183 aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~----~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~ 256 (294)
T 2rku_A 183 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET----YLRIKK--NEYSIPKHINPVAASLIQKMLQTDPTA 256 (294)
T ss_dssp CHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH----HHHHHT--TCCCCCTTSCHHHHHHHHHHTCSSGGG
T ss_pred CcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHhh--ccCCCccccCHHHHHHHHHHcccChhh
Confidence 99999988899999999999999999999998876432211 111111 112345566788999999999999999
Q ss_pred CCCHHHHHHHHHh
Q 014484 232 RPNAKSLVISLMS 244 (423)
Q Consensus 232 Rps~~~vl~~l~~ 244 (423)
|||+++++++..-
T Consensus 257 Rps~~~ll~~~~~ 269 (294)
T 2rku_A 257 RPTINELLNDEFF 269 (294)
T ss_dssp SCCGGGGGGSHHH
T ss_pred CcCHHHHhhChhe
Confidence 9999999988654
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-41 Score=314.79 Aligned_cols=243 Identities=18% Similarity=0.214 Sum_probs=193.6
Q ss_pred CCCCccceeee--ecceeeeeecCC-ChhhHHHHHHHHHHHhcCCCCCccceEeEEEe----CCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICW--FHCHLKSSVLES-SDLGETLNLEEAKAVGNLRSERLANLIGCCYE----ADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~--~~~~~~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||.+.. .+..+++|++.. .......+.+|++++..++||||+++++++.. ....++||||+.+++|.+
T Consensus 40 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~ 119 (317)
T 2buj_A 40 GGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWN 119 (317)
T ss_dssp --CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECCTTCBHHH
T ss_pred CCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeCCCCcHHH
Confidence 89999999986 367788887644 33456788999999999999999999999973 346789999999999999
Q ss_pred hhccC--CCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-----------
Q 014484 75 HLFHW--ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----------- 141 (423)
Q Consensus 75 ~i~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----------- 141 (423)
++... .+..+++..++.++.|++.||.|||+++ |+||||||+||+++.++.++|+|||++......
T Consensus 120 ~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~ 198 (317)
T 2buj_A 120 EIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG-YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQ 198 (317)
T ss_dssp HHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCSSCEESCEEEESHHHHHHHH
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEcCCCCEEEEecCcchhccccccccccccccc
Confidence 88642 3567999999999999999999999999 999999999999999999999999988765421
Q ss_pred --CccccCcccCCccccccCC---CCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHH
Q 014484 142 --KSYSTNLAFTPPEYMRTGR---VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTE 216 (423)
Q Consensus 142 --~~~~~t~~y~aPE~~~~~~---~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (423)
....||+.|+|||.+.+.. ++.++|||||||++|+|++|..||...... ................+..++++
T Consensus 199 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 275 (317)
T 2buj_A 199 DWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQK---GDSVALAVQNQLSIPQSPRHSSA 275 (317)
T ss_dssp HHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHT---TSCHHHHHHCC--CCCCTTSCHH
T ss_pred ccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcc---cchhhHHhhccCCCCccccCCHH
Confidence 1234689999999987554 688999999999999999999887542111 11111111122222334456788
Q ss_pred HHHHHHHhcccCcCCCCCHHHHHHHHHhhhhh
Q 014484 217 LVRLASRCLQSEARERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 217 l~~li~~cl~~dp~~Rps~~~vl~~l~~~~~~ 248 (423)
+.++|.+||+.||.+|||+.+++++|+.+...
T Consensus 276 l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~ 307 (317)
T 2buj_A 276 LWQLLNSMMTVDPHQRPHIPLLLSQLEALQPP 307 (317)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCC
T ss_pred HHHHHHHHhhcChhhCCCHHHHHHHhhhcCCC
Confidence 99999999999999999999999999887644
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-41 Score=334.23 Aligned_cols=235 Identities=16% Similarity=0.110 Sum_probs=195.8
Q ss_pred CCCCccceeeee--cceeeeeecCCC----hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS----DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+... +..+++|++... ......+.+|+.++++++||||+++++++.+.+..++||||+.|++|.++
T Consensus 37 G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 116 (484)
T 3nyv_A 37 GSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDE 116 (484)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHH
T ss_pred CCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCCCCHHHH
Confidence 899999999884 677888887443 23467889999999999999999999999999999999999999999998
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeee---cCCCCeEEccccccccCCCCC---ccccCcc
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILF---DKDGNPRLSSFGLMKNSRDGK---SYSTNLA 149 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~~---~~~~t~~ 149 (423)
+.. .+.+++..++.++.||+.||.|||+++ |+||||||+|||+ +.++.+||+|||+++...... ...||+.
T Consensus 117 ~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~ 193 (484)
T 3nyv_A 117 IIS--RKRFSEVDAARIIRQVLSGITYMHKNK-IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAY 193 (484)
T ss_dssp HHT--CSCCBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCCSHHHHTTGGG
T ss_pred HHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcccccccccCCCCcc
Confidence 854 457999999999999999999999999 9999999999999 567899999999998765443 3468999
Q ss_pred cCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCC--CChhHHHHHHHHHHHhccc
Q 014484 150 FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGH--FSNDEGTELVRLASRCLQS 227 (423)
Q Consensus 150 y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~ 227 (423)
|+|||++.+ .++.++|||||||++|+|++|.+||........ ...+........ ....+++++.++|.+||+.
T Consensus 194 y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~ 268 (484)
T 3nyv_A 194 YIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDI----LKKVEKGKYTFELPQWKKVSESAKDLIRKMLTY 268 (484)
T ss_dssp TCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHCCCCCCSGGGGGSCHHHHHHHHHHTCS
T ss_pred ccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHH----HHHHHcCCCCCCCcccccCCHHHHHHHHHHCCC
Confidence 999999875 699999999999999999999999876432211 111111111111 1235678899999999999
Q ss_pred CcCCCCCHHHHHHHHHh
Q 014484 228 EARERPNAKSLVISLMS 244 (423)
Q Consensus 228 dp~~Rps~~~vl~~l~~ 244 (423)
||.+|||+.++++|.+-
T Consensus 269 dp~~R~s~~e~l~h~~~ 285 (484)
T 3nyv_A 269 VPSMRISARDALDHEWI 285 (484)
T ss_dssp SGGGSCCHHHHHTSHHH
T ss_pred ChhHCcCHHHHhhChhh
Confidence 99999999999998654
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-41 Score=318.18 Aligned_cols=242 Identities=15% Similarity=0.191 Sum_probs=194.7
Q ss_pred CCCCccceeeeecceeeeeecCCChhhHHHHHHHHHHHhc--CCCCCccceEeEEEeCC----ceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGN--LRSERLANLIGCCYEAD----ERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~~----~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||++.+.+..+++|++... ....+.+|++++.. ++||||+++++++.... ..++||||+++|+|.++
T Consensus 53 G~~g~Vy~~~~~~~~vavK~~~~~--~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~ 130 (342)
T 1b6c_B 53 GRFGEVWRGKWRGEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDY 130 (342)
T ss_dssp ETTEEEEEEEETTEEEEEEEECGG--GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECCCTTCBHHHH
T ss_pred CCCcEEEEEEEcCccEEEEEeCch--hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEeecCCCcHHHH
Confidence 899999999998888999987654 34567788888887 79999999999999876 78999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHH--------cCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC------
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCS--------SKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------ 141 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH--------~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~------ 141 (423)
+.+ ..+++..++.++.|++.||.||| +++ |+||||||+||+++.++.+||+|||+++.....
T Consensus 131 l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~-ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~ 206 (342)
T 1b6c_B 131 LNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDI 206 (342)
T ss_dssp HHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE-EECSCCSGGGEEECTTSCEEECCCTTCEEEETTTTEEEE
T ss_pred Hhc---cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC-eeeCCCCHHHEEECCCCCEEEEECCCceecccccccccc
Confidence 953 46999999999999999999999 888 999999999999999999999999998755432
Q ss_pred --CccccCcccCCccccccCC------CCCCcceehhHHHHHHHhhC----------CCCCCchhhHHhhhchhhh-hcc
Q 014484 142 --KSYSTNLAFTPPEYMRTGR------VTPESVVYSFGTMLLDLLSG----------KHIPPSHALDLIRSKNFLL-LMD 202 (423)
Q Consensus 142 --~~~~~t~~y~aPE~~~~~~------~~~~~Di~slG~~l~el~~g----------~~~~~~~~~~~~~~~~~~~-~~~ 202 (423)
....||+.|+|||++.+.. ++.++|||||||++|+|++| ..||............+.. ...
T Consensus 207 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 286 (342)
T 1b6c_B 207 APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCE 286 (342)
T ss_dssp CCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTT
T ss_pred ccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHH
Confidence 3346899999999988652 34689999999999999999 5565432111001111111 112
Q ss_pred ccccCCCC-----hhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhhhc
Q 014484 203 SALEGHFS-----NDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEA 249 (423)
Q Consensus 203 ~~~~~~~~-----~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~~~~~ 249 (423)
.......+ ..++..+.+++.+||+.||.+|||+.+++++|..+.+..
T Consensus 287 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 287 QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 338 (342)
T ss_dssp SCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred HHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence 22222333 356788999999999999999999999999999987653
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-41 Score=311.90 Aligned_cols=235 Identities=14% Similarity=0.182 Sum_probs=194.1
Q ss_pred CCCCccceeeee--cceeeeeecCCChh-hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDL-GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
|+||.||.+.+. +..+++|++..... ....+.+|+.++..++||||+++++++...+..++||||++|++|.+++..
T Consensus 20 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 99 (304)
T 2jam_A 20 GAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILE 99 (304)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHH
T ss_pred CCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcCCCccHHHHHHH
Confidence 899999999874 77788888765432 345688999999999999999999999999999999999999999999864
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeee---cCCCCeEEccccccccCCCC--CccccCcccCCc
Q 014484 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILF---DKDGNPRLSSFGLMKNSRDG--KSYSTNLAFTPP 153 (423)
Q Consensus 79 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~--~~~~~t~~y~aP 153 (423)
.+.+++..++.++.|++.||.|||+++ ++||||||+||++ +.++.++|+|||+++..... ....||+.|+||
T Consensus 100 --~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aP 176 (304)
T 2jam_A 100 --RGVYTEKDASLVIQQVLSAVKYLHENG-IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGYVAP 176 (304)
T ss_dssp --HSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTTHHHHSCCCBCCT
T ss_pred --cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCccccccCCCCccCh
Confidence 356999999999999999999999999 9999999999999 77889999999998765433 234589999999
Q ss_pred cccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccc--cccCCCChhHHHHHHHHHHHhcccCcCC
Q 014484 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS--ALEGHFSNDEGTELVRLASRCLQSEARE 231 (423)
Q Consensus 154 E~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (423)
|.+.+..++.++|||||||++|+|++|..||......... ...... .........+++++.++|.+||+.||.+
T Consensus 177 E~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~ 252 (304)
T 2jam_A 177 EVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLF----EKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNE 252 (304)
T ss_dssp TTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH----HHHHHCCCCCCTTTTTTSCHHHHHHHHHHHCSSTTT
T ss_pred HHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHH----HHHHcCCCCCCccccccCCHHHHHHHHHHcCCChhH
Confidence 9999888999999999999999999999988764322111 111111 1122233456788999999999999999
Q ss_pred CCCHHHHHHHHH
Q 014484 232 RPNAKSLVISLM 243 (423)
Q Consensus 232 Rps~~~vl~~l~ 243 (423)
|||++++++|..
T Consensus 253 Rps~~~~l~h~~ 264 (304)
T 2jam_A 253 RYTCEKALSHPW 264 (304)
T ss_dssp SCCHHHHHTSHH
T ss_pred CcCHHHHhcCcc
Confidence 999999998754
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-41 Score=317.59 Aligned_cols=238 Identities=17% Similarity=0.171 Sum_probs=187.9
Q ss_pred CCCCccceeeee--cceeeeeecCCCh-hhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCCCHHhhhc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD-LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~ 77 (423)
|+||.||.+.+. +..+++|++.... .....+.+|++++.++ +||||+++++++.+++..++||||++|++|.+++.
T Consensus 24 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~ 103 (316)
T 2ac3_A 24 GAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIH 103 (316)
T ss_dssp CSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHH
T ss_pred CceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCcHHHHHh
Confidence 899999999874 6778888875543 3367889999999985 79999999999999999999999999999999996
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCC---eEEccccccccCCCC-----------Cc
Q 014484 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGN---PRLSSFGLMKNSRDG-----------KS 143 (423)
Q Consensus 78 ~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~---~kl~Dfg~~~~~~~~-----------~~ 143 (423)
. ...+++..+..++.||+.||.|||+++ |+||||||+||+++.++. +||+|||++...... ..
T Consensus 104 ~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~ 180 (316)
T 2ac3_A 104 K--RRHFNELEASVVVQDVASALDFLHNKG-IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLT 180 (316)
T ss_dssp H--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEESCSSSSCSEEECCTTCCC------------------
T ss_pred c--cCCCCHHHHHHHHHHHHHHHHHHHhCC-ceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCcccccccccccc
Confidence 4 356999999999999999999999999 999999999999988775 999999998754321 12
Q ss_pred cccCcccCCcccccc-----CCCCCCcceehhHHHHHHHhhCCCCCCchhhHH----------hhhchhhhhccccccCC
Q 014484 144 YSTNLAFTPPEYMRT-----GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDL----------IRSKNFLLLMDSALEGH 208 (423)
Q Consensus 144 ~~~t~~y~aPE~~~~-----~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~ 208 (423)
..||+.|+|||++.+ ..++.++|||||||++|+|++|..||....... .........+... ...
T Consensus 181 ~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~ 259 (316)
T 2ac3_A 181 PCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEG-KYE 259 (316)
T ss_dssp -CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHC-CCC
T ss_pred ccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhcc-Ccc
Confidence 358999999999875 458999999999999999999999986532100 0000011111111 112
Q ss_pred CCh----hHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 209 FSN----DEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 209 ~~~----~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
++. .+++++.++|.+||+.||.+|||++++++|..
T Consensus 260 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~ 298 (316)
T 2ac3_A 260 FPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPW 298 (316)
T ss_dssp CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTT
T ss_pred cCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChh
Confidence 222 35678999999999999999999999998743
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-41 Score=331.77 Aligned_cols=235 Identities=16% Similarity=0.128 Sum_probs=193.8
Q ss_pred CCCCccceeeee--cceeeeeecCCCh---hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
|+||.||.+.+. +..+++|++.... .....+.+|++++++++||||+++++++.+....++||||+.|++|.+++
T Consensus 33 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~ 112 (486)
T 3mwu_A 33 GSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEI 112 (486)
T ss_dssp CSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHH
T ss_pred cCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEEcCCCCcHHHHH
Confidence 899999999985 6778888874322 23567889999999999999999999999999999999999999999988
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeec---CCCCeEEccccccccCCCC---CccccCccc
Q 014484 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFD---KDGNPRLSSFGLMKNSRDG---KSYSTNLAF 150 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~---~~~~~kl~Dfg~~~~~~~~---~~~~~t~~y 150 (423)
.. .+.+++..+..++.||+.||.|||+++ |+||||||+|||++ .++.+||+|||+++..... ....||+.|
T Consensus 113 ~~--~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y 189 (486)
T 3mwu_A 113 IK--RKRFSEHDAARIIKQVFSGITYMHKHN-IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYY 189 (486)
T ss_dssp HH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC----CCTTGGGG
T ss_pred Hh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCCccCCCcCCCCC
Confidence 64 357999999999999999999999999 99999999999995 4567999999999865543 345689999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccC--CCChhHHHHHHHHHHHhcccC
Q 014484 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEG--HFSNDEGTELVRLASRCLQSE 228 (423)
Q Consensus 151 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~d 228 (423)
+|||++.+ .++.++|||||||++|+|++|..||......... ..+....... .....+++++.++|.+||+.|
T Consensus 190 ~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~----~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~d 264 (486)
T 3mwu_A 190 IAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDIL----KRVETGKYAFDLPQWRTISDDAKDLIRKMLTFH 264 (486)
T ss_dssp CCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHHTCCCSCSGGGGGSCHHHHHHHHHHTCSS
T ss_pred CCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH----HHHHhCCCCCCCcccCCCCHHHHHHHHHHcCCC
Confidence 99999875 5899999999999999999999998765322211 1111111111 112346788999999999999
Q ss_pred cCCCCCHHHHHHHHHh
Q 014484 229 ARERPNAKSLVISLMS 244 (423)
Q Consensus 229 p~~Rps~~~vl~~l~~ 244 (423)
|.+|||+.++++|.+-
T Consensus 265 p~~R~t~~~~l~hp~~ 280 (486)
T 3mwu_A 265 PSLRITATQCLEHPWI 280 (486)
T ss_dssp TTTSCCHHHHHHCHHH
T ss_pred hhhCcCHHHHhcCHhh
Confidence 9999999999998654
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-41 Score=310.43 Aligned_cols=237 Identities=14% Similarity=0.174 Sum_probs=193.3
Q ss_pred CCCCccceeeee--cceeeeeecCCCh-hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
|+||.||.+.+. +..+++|.+.... .....+.+|+.++..++||||+++++++...+..++||||+++++|.+++..
T Consensus 33 G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 112 (295)
T 2clq_A 33 GTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRS 112 (295)
T ss_dssp CSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEHHHHHHH
T ss_pred cCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHHHHHHh
Confidence 899999999984 5677888765543 3456788999999999999999999999999999999999999999999975
Q ss_pred CC-CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecC-CCCeEEccccccccCCCC----CccccCcccCC
Q 014484 79 WE-TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK-DGNPRLSSFGLMKNSRDG----KSYSTNLAFTP 152 (423)
Q Consensus 79 ~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~-~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~a 152 (423)
.. ...+++..+..++.|++.||.|||+++ ++||||||+||+++. ++.++|+|||++...... ....||+.|+|
T Consensus 113 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~a 191 (295)
T 2clq_A 113 KWGPLKDNEQTIGFYTKQILEGLKYLHDNQ-IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMA 191 (295)
T ss_dssp TTCCCTTCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----CCCCCCGGGCC
T ss_pred hccCCCccHHHHHHHHHHHHHHHHHHHhCC-EEccCCChhhEEEECCCCCEEEeecccccccCCCCCcccccCCCccccC
Confidence 32 235779999999999999999999999 999999999999987 889999999999865532 34568999999
Q ss_pred ccccccCC--CCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcC
Q 014484 153 PEYMRTGR--VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (423)
Q Consensus 153 PE~~~~~~--~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (423)
||.+.+.. ++.++|||||||++|+|++|..||......... .............+..+++++.++|.+||+.||+
T Consensus 192 PE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~ 268 (295)
T 2clq_A 192 PEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAA---MFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPD 268 (295)
T ss_dssp HHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHH---HHHHHHHCCCCCCCTTSCHHHHHHHHHTTCSSTT
T ss_pred hhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHH---HHhhccccccccccccCCHHHHHHHHHHccCChh
Confidence 99987654 788999999999999999999888643211111 1111111223345666788999999999999999
Q ss_pred CCCCHHHHHHHH
Q 014484 231 ERPNAKSLVISL 242 (423)
Q Consensus 231 ~Rps~~~vl~~l 242 (423)
+|||+.++++|-
T Consensus 269 ~Rps~~~ll~~~ 280 (295)
T 2clq_A 269 KRACANDLLVDE 280 (295)
T ss_dssp TSCCHHHHHTSG
T ss_pred hCCCHHHHhcCh
Confidence 999999999774
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-41 Score=325.29 Aligned_cols=246 Identities=12% Similarity=0.126 Sum_probs=197.8
Q ss_pred CCCCccceeeee--cceeeeeecCCCh--hhHHHHHHHHHHHhcCCCCCccceEeEEEeCC--ceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEAD--ERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.+. +..+++|++.... .....+.+|+++++.++||||+++++++...+ ..++||||++||+|.++
T Consensus 20 G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~~g~L~~~ 99 (396)
T 4eut_A 20 GATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTV 99 (396)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECCCTTEEHHHH
T ss_pred CCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEecCCCCCHHHH
Confidence 899999999986 7788888876543 23567889999999999999999999998765 67999999999999999
Q ss_pred hccCC-CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeee----cCCCCeEEccccccccCCCC---CccccC
Q 014484 76 LFHWE-TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILF----DKDGNPRLSSFGLMKNSRDG---KSYSTN 147 (423)
Q Consensus 76 i~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill----~~~~~~kl~Dfg~~~~~~~~---~~~~~t 147 (423)
+.... ...+++..++.++.||+.||.|||+++ |+||||||+|||+ +.++.+||+|||+++..... ....||
T Consensus 100 l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~gt 178 (396)
T 4eut_A 100 LEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG-IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGT 178 (396)
T ss_dssp TTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCGGGSSCSSSC
T ss_pred HHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCC-EEECCcCHHHEEEeecCCCceeEEEecCCCceEccCCCccccccCC
Confidence 96432 233999999999999999999999999 9999999999999 77778999999999876543 345689
Q ss_pred cccCCcccccc--------CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccc----------------
Q 014484 148 LAFTPPEYMRT--------GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS---------------- 203 (423)
Q Consensus 148 ~~y~aPE~~~~--------~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~---------------- 203 (423)
+.|+|||++.+ ..++.++|||||||++|+|++|..||...................
T Consensus 179 ~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 258 (396)
T 4eut_A 179 EEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGP 258 (396)
T ss_dssp CTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTCC
T ss_pred ccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccchhheeccCCC
Confidence 99999999865 467889999999999999999998875321111111111111110
Q ss_pred -------cccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhhh
Q 014484 204 -------ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 204 -------~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~~~~ 248 (423)
.....++..++..+.+++.+||+.||++|||+.++++.+..+...
T Consensus 259 ~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 259 IDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp EEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred cccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 111123466788999999999999999999999999999887654
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-40 Score=305.64 Aligned_cols=235 Identities=15% Similarity=0.107 Sum_probs=192.7
Q ss_pred CCCCccceeeee--cceeeeeecCCCh--hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~ 77 (423)
|+||.||.+.+. +..+++|++.... ...+.+.+|+.+++.++||||+++++++.+++..++||||+++++|.+++.
T Consensus 18 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~ 97 (276)
T 2yex_A 18 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE 97 (276)
T ss_dssp CSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEGGGGSB
T ss_pred CCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEecCCCcHHHHHh
Confidence 899999999885 6778888764432 345788999999999999999999999999999999999999999999985
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCC------CCccccCcccC
Q 014484 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD------GKSYSTNLAFT 151 (423)
Q Consensus 78 ~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~------~~~~~~t~~y~ 151 (423)
. ...+++..++.++.|++.||.|||+++ ++||||||+||+++.++.++|+|||++..... .....+|+.|+
T Consensus 98 ~--~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~ 174 (276)
T 2yex_A 98 P--DIGMPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174 (276)
T ss_dssp T--TTBCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGC
T ss_pred h--ccCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhcccCCccccCcc
Confidence 3 457999999999999999999999999 99999999999999999999999999875432 23456899999
Q ss_pred CccccccCCC-CCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcC
Q 014484 152 PPEYMRTGRV-TPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (423)
Q Consensus 152 aPE~~~~~~~-~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (423)
|||.+.+..+ +.++|||||||++|+|++|..||......... ................+++++.++|.+||+.||.
T Consensus 175 aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~ 251 (276)
T 2yex_A 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE---YSDWKEKKTYLNPWKKIDSAPLALLHKILVENPS 251 (276)
T ss_dssp CGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHH---HHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTT
T ss_pred ChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHH---HHHhhhcccccCchhhcCHHHHHHHHHHCCCCch
Confidence 9999987665 77999999999999999999988654221111 1111111111112235678899999999999999
Q ss_pred CCCCHHHHHHHH
Q 014484 231 ERPNAKSLVISL 242 (423)
Q Consensus 231 ~Rps~~~vl~~l 242 (423)
+|||++++++|.
T Consensus 252 ~Rps~~~il~~~ 263 (276)
T 2yex_A 252 ARITIPDIKKDR 263 (276)
T ss_dssp TSCCHHHHTTCT
T ss_pred hCCCHHHHhcCc
Confidence 999999998763
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-40 Score=308.97 Aligned_cols=236 Identities=17% Similarity=0.181 Sum_probs=190.9
Q ss_pred CCCCccceeeee--cceeeeeecCCCh-----hhHHHHHHHHHHHhcCCCCCccceEeEEE--eCCceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD-----LGETLNLEEAKAVGNLRSERLANLIGCCY--EADERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~~~~~~~--~~~~~~lv~e~~~~~~L 72 (423)
|+||.||.+.+. +..+++|++.... .....+.+|+++++.++||||+++++++. +....++||||+.++ |
T Consensus 16 G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~-l 94 (305)
T 2wtk_C 16 GSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-M 94 (305)
T ss_dssp CSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEEEECCSEE-H
T ss_pred CCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEehhccCC-H
Confidence 899999999884 5677888775543 23567899999999999999999999984 455789999999875 7
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC------Ccccc
Q 014484 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------KSYST 146 (423)
Q Consensus 73 ~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~------~~~~~ 146 (423)
.+++.......+++..+..++.||+.||.|||+++ ++||||||+||+++.++.++|+|||++...... ....+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~-i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~ 173 (305)
T 2wtk_C 95 QEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQG-IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQG 173 (305)
T ss_dssp HHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECCTTCSSCEECCCCS
T ss_pred HHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCcccEEEcCCCcEEeeccccccccCccccccccccCCC
Confidence 77776555678999999999999999999999999 999999999999999999999999999765432 23458
Q ss_pred CcccCCccccccCC--CCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHh
Q 014484 147 NLAFTPPEYMRTGR--VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRC 224 (423)
Q Consensus 147 t~~y~aPE~~~~~~--~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 224 (423)
|+.|+|||++.+.. ++.++|||||||++|+|++|..||......... ..+.. ....++..+++++.++|.+|
T Consensus 174 ~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~----~~i~~--~~~~~~~~~~~~l~~li~~~ 247 (305)
T 2wtk_C 174 SPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLF----ENIGK--GSYAIPGDCGPPLSDLLKGM 247 (305)
T ss_dssp CGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH----HHHHH--CCCCCCSSSCHHHHHHHHHH
T ss_pred CCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHH----HHHhc--CCCCCCCccCHHHHHHHHHH
Confidence 99999999987644 477999999999999999999988764222111 11111 11234556778899999999
Q ss_pred cccCcCCCCCHHHHHHHHHhh
Q 014484 225 LQSEARERPNAKSLVISLMSL 245 (423)
Q Consensus 225 l~~dp~~Rps~~~vl~~l~~~ 245 (423)
|+.||.+|||++++++|..-.
T Consensus 248 l~~dp~~Rps~~~ll~~~~~~ 268 (305)
T 2wtk_C 248 LEYEPAKRFSIRQIRQHSWFR 268 (305)
T ss_dssp TCSSTTTSCCHHHHHHSHHHH
T ss_pred ccCChhhCCCHHHHhcCcccc
Confidence 999999999999999986543
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-41 Score=333.79 Aligned_cols=235 Identities=15% Similarity=0.137 Sum_probs=191.5
Q ss_pred CCCCccceeeee--cceeeeeecCCCh--------------hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEe
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD--------------LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAE 65 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~--------------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 65 (423)
|+||.||.+.+. +..+++|++.... .....+.+|+.+++.++||||+++++++.++...++|||
T Consensus 47 G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 126 (504)
T 3q5i_A 47 GAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTE 126 (504)
T ss_dssp --CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred cCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEe
Confidence 899999999975 5678888775543 234678899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCC---CeEEccccccccCCCC-
Q 014484 66 FMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG---NPRLSSFGLMKNSRDG- 141 (423)
Q Consensus 66 ~~~~~~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~---~~kl~Dfg~~~~~~~~- 141 (423)
||+||+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++ .+||+|||+++.....
T Consensus 127 ~~~gg~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 203 (504)
T 3q5i_A 127 FYEGGELFEQIIN--RHKFDECDAANIMKQILSGICYLHKHN-IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDY 203 (504)
T ss_dssp CCTTCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESSTTCCSSEEECCCTTCEECCTTS
T ss_pred cCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCcHHHEEEecCCCCccEEEEECCCCEEcCCCC
Confidence 9999999998864 456999999999999999999999999 99999999999998776 6999999999866543
Q ss_pred --CccccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCC--ChhHHHHH
Q 014484 142 --KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHF--SNDEGTEL 217 (423)
Q Consensus 142 --~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l 217 (423)
....||+.|+|||++. ..++.++|||||||++|+|++|..||......... ..+......... ...+++++
T Consensus 204 ~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~----~~i~~~~~~~~~~~~~~~s~~~ 278 (504)
T 3q5i_A 204 KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDII----KKVEKGKYYFDFNDWKNISDEA 278 (504)
T ss_dssp CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHHCCCCCCHHHHTTSCHHH
T ss_pred ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHH----HHHHcCCCCCCccccCCCCHHH
Confidence 3456899999999987 56999999999999999999999998765322211 111111111010 12357889
Q ss_pred HHHHHHhcccCcCCCCCHHHHHHHHHh
Q 014484 218 VRLASRCLQSEARERPNAKSLVISLMS 244 (423)
Q Consensus 218 ~~li~~cl~~dp~~Rps~~~vl~~l~~ 244 (423)
.++|.+||+.||.+|||++++++|.+-
T Consensus 279 ~~li~~~L~~dp~~R~t~~e~l~h~~~ 305 (504)
T 3q5i_A 279 KELIKLMLTYDYNKRCTAEEALNSRWI 305 (504)
T ss_dssp HHHHHHHTCSSTTTSCCHHHHHTSHHH
T ss_pred HHHHHHHcCCChhHCCCHHHHhcCHhh
Confidence 999999999999999999999988654
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-41 Score=332.19 Aligned_cols=235 Identities=15% Similarity=0.145 Sum_probs=189.5
Q ss_pred CCCCccceeeee--cceeeeeecCCCh---hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
|+||.||.+.+. +..+++|++.... .....+.+|+.+++.++||||++++++|.+....++|||||+||+|.+++
T Consensus 48 G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~~ 127 (494)
T 3lij_A 48 GAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEI 127 (494)
T ss_dssp C---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHH
T ss_pred CCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCcHHHHH
Confidence 899999999985 6677888775432 23567889999999999999999999999999999999999999999988
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCC---CCeEEccccccccCCCC---CccccCccc
Q 014484 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKD---GNPRLSSFGLMKNSRDG---KSYSTNLAF 150 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~---~~~kl~Dfg~~~~~~~~---~~~~~t~~y 150 (423)
.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.. +.+||+|||+++..... ....||+.|
T Consensus 128 ~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y 204 (494)
T 3lij_A 128 IH--RMKFNEVDAAVIIKQVLSGVTYLHKHN-IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYY 204 (494)
T ss_dssp HH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBCBCCCCSCTTT
T ss_pred HH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCccccccCCCcCe
Confidence 64 356999999999999999999999999 9999999999999764 45999999999866543 345689999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhcccccc--CCCChhHHHHHHHHHHHhcccC
Q 014484 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALE--GHFSNDEGTELVRLASRCLQSE 228 (423)
Q Consensus 151 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~d 228 (423)
+|||++. ..++.++|||||||++|+|++|..||......... ..+...... ......+++++.++|.+||+.|
T Consensus 205 ~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~----~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~d 279 (494)
T 3lij_A 205 IAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEIL----RKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFD 279 (494)
T ss_dssp CCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHHTCCCCCSGGGTTSCHHHHHHHHHHTCSS
T ss_pred eCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHH----HHHHhCCCCCCchhcccCCHHHHHHHHHHCCCC
Confidence 9999886 56999999999999999999999998765322211 111111111 1111345788999999999999
Q ss_pred cCCCCCHHHHHHHHHh
Q 014484 229 ARERPNAKSLVISLMS 244 (423)
Q Consensus 229 p~~Rps~~~vl~~l~~ 244 (423)
|.+|||+.++++|.+-
T Consensus 280 p~~R~s~~e~l~hp~~ 295 (494)
T 3lij_A 280 SQRRISAQQALEHPWI 295 (494)
T ss_dssp TTTSCCHHHHHTCHHH
T ss_pred hhhCccHHHHhcCccc
Confidence 9999999999988553
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-40 Score=308.33 Aligned_cols=235 Identities=17% Similarity=0.197 Sum_probs=188.8
Q ss_pred CCCCccceeeee--cceeeeeecCCC---hhhHHHHHHHHHHHhcCCCCCccceEeEEEe----CCceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYE----ADERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~~lv~e~~~~~~L 72 (423)
|+||.||.+.+. +..+++|.+... ......+.+|+.+++.++||||+++++++.. +...++||||+++++|
T Consensus 37 G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L 116 (290)
T 1t4h_A 37 GSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTL 116 (290)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBH
T ss_pred CCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEEecCCCCH
Confidence 899999999885 556676666432 3446678999999999999999999999876 3457999999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCC-CeeeccCCCCCeeec-CCCCeEEccccccccCCCC--CccccCc
Q 014484 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKG-RALYHDLNAYRILFD-KDGNPRLSSFGLMKNSRDG--KSYSTNL 148 (423)
Q Consensus 73 ~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-~iiH~dlkp~Nill~-~~~~~kl~Dfg~~~~~~~~--~~~~~t~ 148 (423)
.+++.. .+.+++..++.++.|++.||.|||+++ +++||||||+||+++ .++.++|+|||++...... ....||+
T Consensus 117 ~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~t~ 194 (290)
T 1t4h_A 117 KTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTP 194 (290)
T ss_dssp HHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBEESCSSC
T ss_pred HHHHHH--ccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccccccccccccCCc
Confidence 999964 356999999999999999999999985 499999999999997 7889999999999765544 2356899
Q ss_pred ccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccC
Q 014484 149 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSE 228 (423)
Q Consensus 149 ~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 228 (423)
.|+|||.+. +.++.++|||||||++|+|++|..||........... ..........++...++++.++|.+||+.|
T Consensus 195 ~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~li~~~l~~d 270 (290)
T 1t4h_A 195 EFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYR---RVTSGVKPASFDKVAIPEVKEIIEGCIRQN 270 (290)
T ss_dssp CCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHH---HHTTTCCCGGGGGCCCHHHHHHHHHHSCSS
T ss_pred CcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHH---HHhccCCccccCCCCCHHHHHHHHHHccCC
Confidence 999999887 4699999999999999999999998865321111111 111111111223344578999999999999
Q ss_pred cCCCCCHHHHHHHH
Q 014484 229 ARERPNAKSLVISL 242 (423)
Q Consensus 229 p~~Rps~~~vl~~l 242 (423)
|.+|||++++++|.
T Consensus 271 p~~Rps~~ell~h~ 284 (290)
T 1t4h_A 271 KDERYSIKDLLNHA 284 (290)
T ss_dssp GGGSCCHHHHHTSG
T ss_pred hhhCCCHHHHhhCc
Confidence 99999999999874
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-41 Score=311.06 Aligned_cols=240 Identities=18% Similarity=0.214 Sum_probs=194.0
Q ss_pred CCCCccceeeee--cceeeeeecCCC---hhhHHHHHHHHHHHhcCCCCCccceEeEEEe--CCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYE--ADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||.+.+. +..+++|.+... ......+.+|+.++++++||||+++++++.. +...++||||+++++|.+
T Consensus 17 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~ 96 (279)
T 2w5a_A 17 GSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS 96 (279)
T ss_dssp CSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEECCTTEEHHH
T ss_pred CCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeCCCCCCHHH
Confidence 899999999885 667777777543 3446678999999999999999999998864 567899999999999999
Q ss_pred hhccC--CCCCCCHHHHHHHHHHHHHHHHHHHcCCC----eeeccCCCCCeeecCCCCeEEccccccccCCCCC----cc
Q 014484 75 HLFHW--ETQPMKWAMRLRVALYLAQALEYCSSKGR----ALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK----SY 144 (423)
Q Consensus 75 ~i~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~~----iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~----~~ 144 (423)
++... ....+++..++.++.|++.||.|||+++. ++||||||+||+++.++.++|+|||+++...... ..
T Consensus 97 ~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 176 (279)
T 2w5a_A 97 VITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTF 176 (279)
T ss_dssp HHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHHHC---CHHHHHH
T ss_pred HHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeecccccccccc
Confidence 98642 23459999999999999999999999763 9999999999999999999999999988765443 24
Q ss_pred ccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHh
Q 014484 145 STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRC 224 (423)
Q Consensus 145 ~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 224 (423)
.+|+.|+|||.+.+..++.++|||||||++|+|++|..||........ ...+........+..++.++.++|.+|
T Consensus 177 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-----~~~i~~~~~~~~~~~~~~~l~~li~~~ 251 (279)
T 2w5a_A 177 VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL-----AGKIREGKFRRIPYRYSDELNEIITRM 251 (279)
T ss_dssp HSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-----HHHHHHTCCCCCCTTSCHHHHHHHHHH
T ss_pred CCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHH-----HHHHhhcccccCCcccCHHHHHHHHHH
Confidence 678999999999988899999999999999999999988876432211 111111222345556788999999999
Q ss_pred cccCcCCCCCHHHHHHHHHhhh
Q 014484 225 LQSEARERPNAKSLVISLMSLQ 246 (423)
Q Consensus 225 l~~dp~~Rps~~~vl~~l~~~~ 246 (423)
|+.||.+|||+.+++++++...
T Consensus 252 l~~~p~~Rps~~~ll~~~~~~~ 273 (279)
T 2w5a_A 252 LNLKDYHRPSVEEILENPLILE 273 (279)
T ss_dssp TCSSGGGSCCHHHHHTSTTCCG
T ss_pred cCCCcccCCCHHHHHhChhhhh
Confidence 9999999999999998865443
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-41 Score=316.02 Aligned_cols=238 Identities=15% Similarity=0.159 Sum_probs=183.1
Q ss_pred CCCCccceeeee--cceeeeeecCCChhh---HHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLG---ETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
|+||.||.+.+. +..+++|++...... ...+.+|+.+++.++||||+++++++..++..++||||+.| +|.+++
T Consensus 45 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~L~~~~ 123 (329)
T 3gbz_A 45 GTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYM 123 (329)
T ss_dssp CSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEECCSE-EHHHHH
T ss_pred cCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEecCCC-CHHHHH
Confidence 899999999864 677888887654322 44677999999999999999999999999999999999986 999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeec-----CCCCeEEccccccccCCCC----CccccC
Q 014484 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFD-----KDGNPRLSSFGLMKNSRDG----KSYSTN 147 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~-----~~~~~kl~Dfg~~~~~~~~----~~~~~t 147 (423)
.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++ .++.+||+|||+++..... ....+|
T Consensus 124 ~~--~~~~~~~~~~~i~~ql~~~l~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t 200 (329)
T 3gbz_A 124 DK--NPDVSMRVIKSFLYQLINGVNFCHSRR-CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIIT 200 (329)
T ss_dssp HH--CTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC-----------C
T ss_pred hh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-EECCCCCHHHEEEecCCCCccceEEECcCCCccccCCcccccCCCcCC
Confidence 64 446999999999999999999999999 99999999999994 4455999999999765432 334679
Q ss_pred cccCCccccccCC-CCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhcccc------------ccCC------
Q 014484 148 LAFTPPEYMRTGR-VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSA------------LEGH------ 208 (423)
Q Consensus 148 ~~y~aPE~~~~~~-~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~------ 208 (423)
+.|+|||++.+.. ++.++|||||||++|+|++|..||..................+. ....
T Consensus 201 ~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (329)
T 3gbz_A 201 LWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRG 280 (329)
T ss_dssp CTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCC
T ss_pred ccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhcc
Confidence 9999999998754 89999999999999999999999876532221111111000000 0000
Q ss_pred ------CChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 209 ------FSNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 209 ------~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
.+..+++++.+||.+||+.||.+|||++++++|-.
T Consensus 281 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 321 (329)
T 3gbz_A 281 KTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPY 321 (329)
T ss_dssp CCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGG
T ss_pred ccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCcc
Confidence 01124678999999999999999999999998743
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-41 Score=309.38 Aligned_cols=237 Identities=14% Similarity=0.147 Sum_probs=192.0
Q ss_pred CCCCccceeeee--cceeeeeecCCChh-------hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDL-------GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~-------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 72 (423)
|+||.||.+.+. +..+++|++..... ..+.+.+|+.+++.++||||+++++++...+..++||||+++++|
T Consensus 16 G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 95 (283)
T 3bhy_A 16 GQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGEL 95 (283)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBH
T ss_pred cCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEEEEeecCCCcH
Confidence 899999999985 67778877644321 357789999999999999999999999999999999999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCC----CeEEccccccccCCCC---Cccc
Q 014484 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG----NPRLSSFGLMKNSRDG---KSYS 145 (423)
Q Consensus 73 ~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~----~~kl~Dfg~~~~~~~~---~~~~ 145 (423)
.+++.. ...+++..++.++.|++.||.|||+++ ++||||||+||+++.++ .++|+|||++...... ....
T Consensus 96 ~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 172 (283)
T 3bhy_A 96 FDFLAE--KESLTEDEATQFLKQILDGVHYLHSKR-IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF 172 (283)
T ss_dssp HHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC--------C
T ss_pred HHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCChHHEEEecCCCCCCceEEEecccceeccCCCcccccC
Confidence 999964 456999999999999999999999999 99999999999998877 7999999999866543 3346
Q ss_pred cCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhc
Q 014484 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCL 225 (423)
Q Consensus 146 ~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 225 (423)
+|+.|+|||.+.+..++.++||||||+++|+|++|..||........... .. ..............++.+.+++.+||
T Consensus 173 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~li~~~l 250 (283)
T 3bhy_A 173 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTN-IS-AVNYDFDEEYFSNTSELAKDFIRRLL 250 (283)
T ss_dssp CCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH-HH-TTCCCCCHHHHTTCCHHHHHHHHTTS
T ss_pred CCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHH-hH-hcccCCcchhcccCCHHHHHHHHHHc
Confidence 89999999999988999999999999999999999998876432211111 00 00000000111234678999999999
Q ss_pred ccCcCCCCCHHHHHHHHH
Q 014484 226 QSEARERPNAKSLVISLM 243 (423)
Q Consensus 226 ~~dp~~Rps~~~vl~~l~ 243 (423)
+.||.+|||+.++++|..
T Consensus 251 ~~dp~~Rps~~~~l~h~~ 268 (283)
T 3bhy_A 251 VKDPKRRMTIAQSLEHSW 268 (283)
T ss_dssp CSSGGGSCCHHHHHHCHH
T ss_pred cCCHhHCcCHHHHHhCHH
Confidence 999999999999998754
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-41 Score=319.15 Aligned_cols=234 Identities=18% Similarity=0.203 Sum_probs=191.4
Q ss_pred CCCCccceeeee--cceeeeeecCCCh---------hhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD---------LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPN 69 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~---------~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 69 (423)
|+||.||++.+. +..+++|++.... .....+.+|+.++..+ +||||+++++++......++||||++|
T Consensus 105 G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~g 184 (365)
T 2y7j_A 105 GVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRK 184 (365)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEEEEEECCCTT
T ss_pred CCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEEEEEEEeCCC
Confidence 899999999985 7788888775432 1145678999999999 899999999999999999999999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC---Ccccc
Q 014484 70 ETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYST 146 (423)
Q Consensus 70 ~~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~~ 146 (423)
++|.+++.. ...+++..+..++.||+.||.|||++| ++||||||+||+++.+|.++|+|||++...... ....|
T Consensus 185 ~~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~~LH~~g-i~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~~~~~~~~~g 261 (365)
T 2y7j_A 185 GELFDYLTE--KVALSEKETRSIMRSLLEAVSFLHANN-IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCG 261 (365)
T ss_dssp CBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECCTTCCBCCCCS
T ss_pred CcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEEEecCcccccCCCcccccCCC
Confidence 999999964 456999999999999999999999999 999999999999999999999999998866543 34568
Q ss_pred CcccCCccccccC------CCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCC--ChhHHHHHH
Q 014484 147 NLAFTPPEYMRTG------RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHF--SNDEGTELV 218 (423)
Q Consensus 147 t~~y~aPE~~~~~------~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~ 218 (423)
|+.|+|||++.+. .++.++|||||||++|+|++|..||......... ............ ....+.++.
T Consensus 262 t~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~~~~ 337 (365)
T 2y7j_A 262 TPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILML----RMIMEGQYQFSSPEWDDRSSTVK 337 (365)
T ss_dssp CGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHHTCCCCCHHHHSSSCHHHH
T ss_pred CCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHH----HHHHhCCCCCCCcccccCCHHHH
Confidence 9999999988633 5888999999999999999999988654222111 111111111000 013467799
Q ss_pred HHHHHhcccCcCCCCCHHHHHHHH
Q 014484 219 RLASRCLQSEARERPNAKSLVISL 242 (423)
Q Consensus 219 ~li~~cl~~dp~~Rps~~~vl~~l 242 (423)
++|.+||+.||.+|||++++++|.
T Consensus 338 ~li~~~L~~dP~~Rps~~ell~hp 361 (365)
T 2y7j_A 338 DLISRLLQVDPEARLTAEQALQHP 361 (365)
T ss_dssp HHHHHHSCSSTTTSCCHHHHHHSG
T ss_pred HHHHHHcCCChhHCcCHHHHhcCc
Confidence 999999999999999999999874
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-41 Score=318.50 Aligned_cols=237 Identities=18% Similarity=0.153 Sum_probs=194.7
Q ss_pred CCCCccceeeeecceeeeeecCCChhhH------------------HHHHHHHHHHhcCCCCCccceEeEEEeCCceeEE
Q 014484 2 GGRCSKFSICWFHCHLKSSVLESSDLGE------------------TLNLEEAKAVGNLRSERLANLIGCCYEADERLLV 63 (423)
Q Consensus 2 G~~g~v~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 63 (423)
|+||.||.+.+.+..+++|++....... ..+.+|+.++..++||||+++++++.+.+..++|
T Consensus 42 G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 121 (348)
T 2pml_X 42 GKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYII 121 (348)
T ss_dssp CSSCCEEEEEETTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEEEESSSEEEEE
T ss_pred CCCeEEEEEEcCCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEE
Confidence 8999999999988888888875543221 7899999999999999999999999999999999
Q ss_pred EecCCCCCHHhh------hccCCCCCCCHHHHHHHHHHHHHHHHHHHc-CCCeeeccCCCCCeeecCCCCeEEccccccc
Q 014484 64 AEFMPNETLAKH------LFHWETQPMKWAMRLRVALYLAQALEYCSS-KGRALYHDLNAYRILFDKDGNPRLSSFGLMK 136 (423)
Q Consensus 64 ~e~~~~~~L~~~------i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~ 136 (423)
|||+++++|.++ +.......+++..++.++.|++.||.|||+ +| ++||||||+||+++.++.++|+|||++.
T Consensus 122 ~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 200 (348)
T 2pml_X 122 YEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN-ICHRDVKPSNILMDKNGRVKLSDFGESE 200 (348)
T ss_dssp EECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSC-EECCCCCGGGEEECTTSCEEECCCTTCE
T ss_pred EeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCC-EeecCCChHhEEEcCCCcEEEecccccc
Confidence 999999999998 654346789999999999999999999999 99 9999999999999999999999999998
Q ss_pred cCCCC--CccccCcccCCccccccC-CCCC-CcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCC----
Q 014484 137 NSRDG--KSYSTNLAFTPPEYMRTG-RVTP-ESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGH---- 208 (423)
Q Consensus 137 ~~~~~--~~~~~t~~y~aPE~~~~~-~~~~-~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 208 (423)
..... ....+|..|+|||.+.+. .++. ++|||||||++|+|++|..||....... ..............
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~~~~i~~~~~~~~~~~~ 277 (348)
T 2pml_X 201 YMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLV---ELFNNIRTKNIEYPLDRN 277 (348)
T ss_dssp ECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSH---HHHHHHTSCCCCCCCSSS
T ss_pred ccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHH---HHHHHHhccCcCCccchh
Confidence 65433 345689999999999877 5666 9999999999999999999887542200 01111111111000
Q ss_pred -------------CChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHH
Q 014484 209 -------------FSNDEGTELVRLASRCLQSEARERPNAKSLVISL 242 (423)
Q Consensus 209 -------------~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l 242 (423)
....+++++.++|.+||+.||.+|||+.++++|.
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp 324 (348)
T 2pml_X 278 HFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHE 324 (348)
T ss_dssp SSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSG
T ss_pred hhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCc
Confidence 0144678899999999999999999999999874
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-41 Score=317.22 Aligned_cols=240 Identities=17% Similarity=0.143 Sum_probs=189.7
Q ss_pred CCCCccceeeee--cceeeeeecCCChhh------HHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHH
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLG------ETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLA 73 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~------~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 73 (423)
|+||.||.+.+. +..+++|++...... ...+.+|++++..++||||+++++++...+..++||||+.+ +|.
T Consensus 21 G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~ 99 (346)
T 1ua2_A 21 GQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMET-DLE 99 (346)
T ss_dssp ETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECCSE-EHH
T ss_pred cCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEEEEEcCCC-CHH
Confidence 899999999885 677888887643221 24678999999999999999999999999999999999987 899
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcc
Q 014484 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLA 149 (423)
Q Consensus 74 ~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~ 149 (423)
+++.. ....+++..+..++.|++.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....+|+.
T Consensus 100 ~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~ 177 (346)
T 1ua2_A 100 VIIKD-NSLVLTPSHIKAYMLMTLQGLEYLHQHW-ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRW 177 (346)
T ss_dssp HHHTT-CCSSCCSSHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCCCSCCCCT
T ss_pred HHHHh-cCcCCCHHHHHHHHHHHHHHHHHHHHCC-EECCCCCHHHEEEcCCCCEEEEecccceeccCCcccCCccccccc
Confidence 88854 3456899999999999999999999999 999999999999999999999999999865432 33568999
Q ss_pred cCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccc-----------------cCCC--
Q 014484 150 FTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSAL-----------------EGHF-- 209 (423)
Q Consensus 150 y~aPE~~~~~-~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~-- 209 (423)
|+|||.+.+. .++.++|||||||++|+|++|.+||............+.....+.. ....
T Consensus 178 y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (346)
T 1ua2_A 178 YRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPL 257 (346)
T ss_dssp TCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCH
T ss_pred ccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcccccccccCCCCh
Confidence 9999998754 4889999999999999999999887764322111111111000000 0000
Q ss_pred ---ChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHh
Q 014484 210 ---SNDEGTELVRLASRCLQSEARERPNAKSLVISLMS 244 (423)
Q Consensus 210 ---~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~ 244 (423)
...++.++.++|.+||+.||.+|||++++++|..-
T Consensus 258 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f 295 (346)
T 1ua2_A 258 HHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYF 295 (346)
T ss_dssp HHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGG
T ss_pred HHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChhh
Confidence 13346789999999999999999999999988554
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-40 Score=310.26 Aligned_cols=236 Identities=13% Similarity=0.146 Sum_probs=193.6
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW 79 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~ 79 (423)
|+||.||.+.+. +..+++|.+.... ....+.+|+.++..++||||+++++++..++..++||||+++++|.+++..
T Consensus 40 G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~- 117 (314)
T 3com_A 40 GSYGSVYKAIHKETGQIVAIKQVPVES-DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRL- 117 (314)
T ss_dssp ---CEEEEEEETTTCCEEEEEEEETTS-CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHH-
T ss_pred CCCeEEEEEEECCCCCEEEEEecCchH-HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecCCCCCHHHHHHh-
Confidence 899999999885 6778888876543 456788999999999999999999999999999999999999999999853
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccCCccc
Q 014484 80 ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPPEY 155 (423)
Q Consensus 80 ~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~aPE~ 155 (423)
....+++..++.++.|++.||.|||+++ ++||||||+||+++.++.++|+|||++...... ....+|+.|+|||.
T Consensus 118 ~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~ 196 (314)
T 3com_A 118 RNKTLTEDEIATILQSTLKGLEYLHFMR-KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEV 196 (314)
T ss_dssp HTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCBCCCCSCGGGCCHHH
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcCCCcCHHHEEECCCCCEEEeecccchhhhhhccccCccCCCCCccChhh
Confidence 3457999999999999999999999999 999999999999999999999999998765433 33568899999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCCH
Q 014484 156 MRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNA 235 (423)
Q Consensus 156 ~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~ 235 (423)
+.+..++.++|||||||++|+|++|..||.......... .. ..........+..++.++.++|.+||+.||.+|||+
T Consensus 197 ~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~ 273 (314)
T 3com_A 197 IQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIF-MI--PTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATA 273 (314)
T ss_dssp HSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-HH--HHSCCCCCSSGGGSCHHHHHHHHHHTCSCTTTSCCH
T ss_pred cCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHH-HH--hcCCCcccCCcccCCHHHHHHHHHHccCChhhCcCH
Confidence 998889999999999999999999998886532111100 00 001111112244567889999999999999999999
Q ss_pred HHHHHHHH
Q 014484 236 KSLVISLM 243 (423)
Q Consensus 236 ~~vl~~l~ 243 (423)
.++++|..
T Consensus 274 ~~ll~~~~ 281 (314)
T 3com_A 274 TQLLQHPF 281 (314)
T ss_dssp HHHTTSHH
T ss_pred HHHHhCHH
Confidence 99998754
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-40 Score=313.13 Aligned_cols=238 Identities=13% Similarity=0.136 Sum_probs=196.2
Q ss_pred CCCCccceeee---ecceeeeeecCCChhhHHHHHHHHHHHhcCCCCC------ccceEeEEEeCCceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICW---FHCHLKSSVLESSDLGETLNLEEAKAVGNLRSER------LANLIGCCYEADERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~---~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~~~~~~~~~~~~~lv~e~~~~~~L 72 (423)
|+||.||.+.+ .+..+++|++.........+.+|++++..++|+| ++++++++...+..++||||+ +++|
T Consensus 25 G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~l 103 (339)
T 1z57_A 25 GAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELL-GLST 103 (339)
T ss_dssp ETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred CCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEEEEEcCC-CCCH
Confidence 89999999987 3677999998877777788899999999997654 999999999999999999999 8899
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecC-------------------CCCeEEcccc
Q 014484 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK-------------------DGNPRLSSFG 133 (423)
Q Consensus 73 ~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~-------------------~~~~kl~Dfg 133 (423)
.+++.......+++..+..++.||+.||.|||+++ |+||||||+||+++. ++.++|+|||
T Consensus 104 ~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg 182 (339)
T 1z57_A 104 YDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNK-LTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFG 182 (339)
T ss_dssp HHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCS
T ss_pred HHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCC-CcCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCc
Confidence 99997655567999999999999999999999999 999999999999987 6689999999
Q ss_pred ccccCCCC-CccccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhcc----------
Q 014484 134 LMKNSRDG-KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD---------- 202 (423)
Q Consensus 134 ~~~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~---------- 202 (423)
+++..... ....||+.|+|||++.+..++.++|||||||++|+|++|..||........... ......
T Consensus 183 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~-~~~~~~~~p~~~~~~~ 261 (339)
T 1z57_A 183 SATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAM-MERILGPLPKHMIQKT 261 (339)
T ss_dssp SCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHH-HHHHHCSCCHHHHHHC
T ss_pred ccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHH-HHHHhCCCCHHHHhhc
Confidence 99865543 446789999999999988999999999999999999999999876422211100 000000
Q ss_pred -----------------------------ccccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHH
Q 014484 203 -----------------------------SALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISL 242 (423)
Q Consensus 203 -----------------------------~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l 242 (423)
.......+...++++.++|.+||+.||.+|||++++++|-
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp 330 (339)
T 1z57_A 262 RKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHP 330 (339)
T ss_dssp SCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSG
T ss_pred cchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcCH
Confidence 0000112334578899999999999999999999999874
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-41 Score=324.78 Aligned_cols=234 Identities=13% Similarity=0.139 Sum_probs=181.8
Q ss_pred CCCCccceeeee--cceeeeeecCCChh---------hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDL---------GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNE 70 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~---------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~ 70 (423)
|+||.||++.+. +..+++|++..... ....+.+|+.++++++||||+++++++.. +..++||||++++
T Consensus 146 G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~~~lv~e~~~~g 224 (419)
T 3i6u_A 146 GACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-EDYYIVLELMEGG 224 (419)
T ss_dssp CSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-SEEEEEEECCTTC
T ss_pred CCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-CceEEEEEcCCCC
Confidence 899999999885 56788887754321 12357899999999999999999999854 5589999999999
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCC---CeEEccccccccCCCC---Ccc
Q 014484 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG---NPRLSSFGLMKNSRDG---KSY 144 (423)
Q Consensus 71 ~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~---~~kl~Dfg~~~~~~~~---~~~ 144 (423)
+|.+++.. .+.+++..+..++.|++.||.|||+++ |+||||||+|||++.++ .+||+|||+++..... ...
T Consensus 225 ~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~~~~~~~~ 301 (419)
T 3i6u_A 225 ELFDKVVG--NKRLKEATCKLYFYQMLLAVQYLHENG-IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL 301 (419)
T ss_dssp BGGGGTSS--SCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC--------
T ss_pred cHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChHhEEEecCCCcceEEEeecccceecCCCcccccc
Confidence 99998853 567999999999999999999999999 99999999999997544 5999999999876543 345
Q ss_pred ccCcccCCcccccc---CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCC---hhHHHHHH
Q 014484 145 STNLAFTPPEYMRT---GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFS---NDEGTELV 218 (423)
Q Consensus 145 ~~t~~y~aPE~~~~---~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~ 218 (423)
.||+.|+|||++.+ ..++.++|||||||++|+|++|..||...... ......+........+ ..+++++.
T Consensus 302 ~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~~~~ 377 (419)
T 3i6u_A 302 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ----VSLKDQITSGKYNFIPEVWAEVSEKAL 377 (419)
T ss_dssp ---CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSS----CCHHHHHHTTCCCCCHHHHTTSCHHHH
T ss_pred CCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcch----HHHHHHHhcCCCCCCchhhcccCHHHH
Confidence 68999999999863 56888999999999999999999998653111 1111111111111111 23567899
Q ss_pred HHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 219 RLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 219 ~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
++|.+||+.||.+|||++++++|.+
T Consensus 378 ~li~~~L~~dP~~Rps~~e~l~hp~ 402 (419)
T 3i6u_A 378 DLVKKLLVVDPKARFTTEEALRHPW 402 (419)
T ss_dssp HHHHHHSCSSTTTSCCHHHHHHSGG
T ss_pred HHHHHHccCChhHCcCHHHHhCCcc
Confidence 9999999999999999999998854
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-41 Score=310.74 Aligned_cols=246 Identities=14% Similarity=0.119 Sum_probs=193.7
Q ss_pred CCCCccceeee--ecceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEE-EeCCceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCC-YEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~--~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
|+||.||.+.+ .+..+++|++..... ...+.+|+.++..++|++++..+..+ ..++..++||||+ +++|.+++..
T Consensus 20 G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~ 97 (296)
T 3uzp_A 20 GSFGDIYLGTDIAAGEEVAIKLECVKTK-HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNF 97 (296)
T ss_dssp ETTEEEEEEEETTTTEEEEEEEEESCSS-CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHH
T ss_pred CCCeEEEEEEEcCCCcEEEEEEecCCcc-hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec-CCCHHHHHHh
Confidence 89999999996 477788887655442 34688999999999988865555554 5667789999999 8899999964
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeee---cCCCCeEEccccccccCCCC-----------Ccc
Q 014484 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILF---DKDGNPRLSSFGLMKNSRDG-----------KSY 144 (423)
Q Consensus 79 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~-----------~~~ 144 (423)
....+++..++.++.|++.||.|||+++ |+||||||+||++ +.++.+||+|||+++..... ...
T Consensus 98 -~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~ 175 (296)
T 3uzp_A 98 -CSRKFSLKTVLLLADQMISRIEYIHSKN-FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNL 175 (296)
T ss_dssp -TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCC
T ss_pred -hccCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccccccccccccccccc
Confidence 3457999999999999999999999999 9999999999999 47889999999998765432 344
Q ss_pred ccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhcccccc---CCCChhHHHHHHHHH
Q 014484 145 STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALE---GHFSNDEGTELVRLA 221 (423)
Q Consensus 145 ~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li 221 (423)
.||+.|+|||.+.+..++.++|||||||++|+|++|..||....... .............. ...+..+++++.+++
T Consensus 176 ~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 254 (296)
T 3uzp_A 176 TGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAT-KRQKYERISEKKMSTPIEVLCKGYPSEFATYL 254 (296)
T ss_dssp CSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSS-SSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHH
T ss_pred ccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchh-hhhhhhhhcccccCCchHHHHhhCCHHHHHHH
Confidence 68999999999999899999999999999999999999987521100 00011111111111 011234567899999
Q ss_pred HHhcccCcCCCCCHHHHHHHHHhhhhhccCC
Q 014484 222 SRCLQSEARERPNAKSLVISLMSLQKEAEVP 252 (423)
Q Consensus 222 ~~cl~~dp~~Rps~~~vl~~l~~~~~~~~~~ 252 (423)
.+||+.||.+|||++++++.|..+......+
T Consensus 255 ~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~ 285 (296)
T 3uzp_A 255 NFCRSLRFDDKPDYSYLRQLFRNLFHRQGFS 285 (296)
T ss_dssp HHHHTSCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred HHHHhcCcCcCCCHHHHHHHHHHHHHhcCCc
Confidence 9999999999999999999999987765443
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-41 Score=315.98 Aligned_cols=240 Identities=16% Similarity=0.259 Sum_probs=189.3
Q ss_pred CCCCccceeeee--cceeeeeecCCCh---hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
|+||.||.+.+. +..+++|++.... .....+.+|+.++..++||||+++++++..++..++||||+++++|.+++
T Consensus 36 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~ 115 (331)
T 4aaa_A 36 GSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLE 115 (331)
T ss_dssp GTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHH
T ss_pred cCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEecCCcchHHHHH
Confidence 899999999985 6778888764433 33556789999999999999999999999999999999999999998887
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccCC
Q 014484 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTP 152 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~a 152 (423)
.. ...+++..+..++.|++.||.|||+++ |+||||||+||+++.++.++|+|||+++..... ....+|+.|+|
T Consensus 116 ~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~a 192 (331)
T 4aaa_A 116 LF--PNGLDYQVVQKYLFQIINGIGFCHSHN-IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRA 192 (331)
T ss_dssp HS--TTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCTTC------------CCCCCTTCC
T ss_pred hh--ccCCCHHHHHHHHHHHHHHHHHHHHCC-EEccCcChheEEEcCCCcEEEEeCCCceeecCCccccCCCcCCccccC
Confidence 43 456999999999999999999999999 999999999999999999999999999765432 34568999999
Q ss_pred ccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhh--------------------hccccccCCC--
Q 014484 153 PEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLL--------------------LMDSALEGHF-- 209 (423)
Q Consensus 153 PE~~~~~-~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~-- 209 (423)
||.+.+. .++.++|||||||++|+|++|..||............... ...+......
T Consensus 193 PE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (331)
T 4aaa_A 193 PELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPL 272 (331)
T ss_dssp HHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCH
T ss_pred cccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCccccccchh
Confidence 9998875 6899999999999999999999988764322111100000 0000000000
Q ss_pred ---ChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHh
Q 014484 210 ---SNDEGTELVRLASRCLQSEARERPNAKSLVISLMS 244 (423)
Q Consensus 210 ---~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~ 244 (423)
.+.+++++.+||.+||+.||.+|||++++++|-.-
T Consensus 273 ~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f 310 (331)
T 4aaa_A 273 ERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFF 310 (331)
T ss_dssp HHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHH
T ss_pred hhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCchh
Confidence 12357889999999999999999999999988543
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-40 Score=307.76 Aligned_cols=235 Identities=16% Similarity=0.206 Sum_probs=187.2
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEe-------------CCceeEEEec
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYE-------------ADERLLVAEF 66 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-------------~~~~~lv~e~ 66 (423)
|+||.||.+.+. +..+++|++.........+.+|+.++..++||||+++++++.+ .+..++||||
T Consensus 17 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~ 96 (303)
T 1zy4_A 17 GAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEY 96 (303)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------CEEEEEEEEEC
T ss_pred CCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccccCCceEEEEec
Confidence 899999999874 7788888887666667889999999999999999999999865 3457899999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-----
Q 014484 67 MPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----- 141 (423)
Q Consensus 67 ~~~~~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----- 141 (423)
++|++|.+++.. .+..+++..++.++.|++.||.|||+++ ++||||||+||+++.++.++|+|||+++.....
T Consensus 97 ~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 174 (303)
T 1zy4_A 97 CENGTLYDLIHS-ENLNQQRDEYWRLFRQILEALSYIHSQG-IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILK 174 (303)
T ss_dssp CCSCBHHHHHHH-SCGGGCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCCCCCSCTTC------
T ss_pred CCCCCHHHhhhc-cccccchHHHHHHHHHHHHHHHHHHhCC-eecccCCHHhEEEcCCCCEEEeeCcchhhcccccchhc
Confidence 999999999964 3456889999999999999999999999 999999999999999999999999998765421
Q ss_pred -------------CccccCcccCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccC
Q 014484 142 -------------KSYSTNLAFTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEG 207 (423)
Q Consensus 142 -------------~~~~~t~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (423)
....||+.|+|||.+.+. .++.++|||||||++|+|++ |+............+ .........
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~~~~~~-~~~~~~~~~ 250 (303)
T 1zy4_A 175 LDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKL-RSVSIEFPP 250 (303)
T ss_dssp -------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHH-HSTTCCCCT
T ss_pred cccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHHHHHhc-cccccccCc
Confidence 234578999999998865 68999999999999999998 333221111000111 111122333
Q ss_pred CCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHH
Q 014484 208 HFSNDEGTELVRLASRCLQSEARERPNAKSLVISL 242 (423)
Q Consensus 208 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l 242 (423)
.++...+..+.++|.+||+.||.+|||+.++++|.
T Consensus 251 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~ 285 (303)
T 1zy4_A 251 DFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSG 285 (303)
T ss_dssp TCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSS
T ss_pred cccccchHHHHHHHHHHHhcCcccCcCHHHHhCCC
Confidence 45556678899999999999999999999999874
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-41 Score=321.55 Aligned_cols=238 Identities=18% Similarity=0.214 Sum_probs=193.5
Q ss_pred CCCCccceeee-----ecceeeeeecCCCh-----hhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCC
Q 014484 2 GGRCSKFSICW-----FHCHLKSSVLESSD-----LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNE 70 (423)
Q Consensus 2 G~~g~v~~~~~-----~~~~~~~~~~~~~~-----~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~ 70 (423)
|+||.||.+.+ .+..+++|++.... .....+.+|++++..+ +||||+++++++...+..++||||++++
T Consensus 65 G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 144 (355)
T 1vzo_A 65 GAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGG 144 (355)
T ss_dssp TTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEECCCCSC
T ss_pred CCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEEEEeecCCCC
Confidence 89999999987 46778888875432 2345677899999999 7999999999999999999999999999
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-----Cccc
Q 014484 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYS 145 (423)
Q Consensus 71 ~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~ 145 (423)
+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....
T Consensus 145 ~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~ 221 (355)
T 1vzo_A 145 ELFTHLSQ--RERFTEHEVQIYVGEIVLALEHLHKLG-IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFC 221 (355)
T ss_dssp BHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGGGGGCGGG
T ss_pred CHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCcEEEeeCCCCeecccCCCCcccCcc
Confidence 99999964 346999999999999999999999999 999999999999999999999999999765432 2346
Q ss_pred cCcccCCccccccC--CCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHH
Q 014484 146 TNLAFTPPEYMRTG--RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASR 223 (423)
Q Consensus 146 ~t~~y~aPE~~~~~--~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 223 (423)
||+.|+|||++.+. .++.++|||||||++|+|++|..||................. .....++..++..+.++|.+
T Consensus 222 gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~ 299 (355)
T 1vzo_A 222 GTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRIL--KSEPPYPQEMSALAKDLIQR 299 (355)
T ss_dssp SCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHH--HCCCCCCTTSCHHHHHHHHH
T ss_pred cCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHh--ccCCCCCcccCHHHHHHHHH
Confidence 89999999999863 478899999999999999999998864321111111111111 12234556677889999999
Q ss_pred hcccCcCCCC-----CHHHHHHHHHh
Q 014484 224 CLQSEARERP-----NAKSLVISLMS 244 (423)
Q Consensus 224 cl~~dp~~Rp-----s~~~vl~~l~~ 244 (423)
||+.||.+|| |++++++|..-
T Consensus 300 ~L~~dP~~R~~~~~~s~~ell~h~~f 325 (355)
T 1vzo_A 300 LLMKDPKKRLGCGPRDADEIKEHLFF 325 (355)
T ss_dssp HTCSSGGGSTTSSTTTHHHHHTSGGG
T ss_pred HhhhCHHHhcCCCCCCHHHHHcCcch
Confidence 9999999999 99999988654
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-41 Score=325.17 Aligned_cols=239 Identities=13% Similarity=0.021 Sum_probs=175.7
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcC--CCCCccceE-------eEEEeCC--------
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNL--RSERLANLI-------GCCYEAD-------- 58 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l--~h~niv~~~-------~~~~~~~-------- 58 (423)
|+||.||.+.+. +..+++|++.... .....+.+|+.++..| +||||++++ +++...+
T Consensus 73 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~~~~~~~~~~ 152 (371)
T 3q60_A 73 GDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQSQPPFAQLS 152 (371)
T ss_dssp CSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEETTSCSSSBCS
T ss_pred CCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecCCCCCeeecc
Confidence 899999999975 6778888887643 3455677885444444 699977755 5554433
Q ss_pred ---------ceeEEEecCCCCCHHhhhccCCCCCCCHHHH------HHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecC
Q 014484 59 ---------ERLLVAEFMPNETLAKHLFHWETQPMKWAMR------LRVALYLAQALEYCSSKGRALYHDLNAYRILFDK 123 (423)
Q Consensus 59 ---------~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~------~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~ 123 (423)
..|+||||++ ++|.+++... +..+++..+ +.++.||+.||.|||+++ |+||||||+|||++.
T Consensus 153 ~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~-ivHrDikp~NIll~~ 229 (371)
T 3q60_A 153 PGQDDYAVANYLLLMPAAS-VDLELLFSTL-DFVYVFRGDEGILALHILTAQLIRLAANLQSKG-LVHGHFTPDNLFIMP 229 (371)
T ss_dssp CC---CCEEEEEEEECCCS-EEHHHHHHHH-HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT-EEETTCSGGGEEECT
T ss_pred CCcccceeeeEEEEecCCC-CCHHHHHHHh-ccccchhhhhhhhhHHHHHHHHHHHHHHHHHCC-CccCcCCHHHEEECC
Confidence 3799999998 7999999642 233455555 677899999999999999 999999999999999
Q ss_pred CCCeEEccccccccCCCCC-ccccCcccCCcccccc--CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhch---h
Q 014484 124 DGNPRLSSFGLMKNSRDGK-SYSTNLAFTPPEYMRT--GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKN---F 197 (423)
Q Consensus 124 ~~~~kl~Dfg~~~~~~~~~-~~~~t~~y~aPE~~~~--~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~---~ 197 (423)
+|.+||+|||+++...... ...+|+.|+|||++.+ ..++.++|||||||++|+|++|..||............ .
T Consensus 230 ~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~ 309 (371)
T 3q60_A 230 DGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSL 309 (371)
T ss_dssp TSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTCCCBCCT
T ss_pred CCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccchhhhhh
Confidence 9999999999998776655 5667899999999987 67999999999999999999999998764221111000 0
Q ss_pred hhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 198 LLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
...............+++++.++|.+||+.||++|||+.++++|.+
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~ 355 (371)
T 3q60_A 310 RVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPE 355 (371)
T ss_dssp TSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHH
T ss_pred hhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHH
Confidence 0011111111222356889999999999999999999999998754
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-41 Score=324.17 Aligned_cols=239 Identities=14% Similarity=0.159 Sum_probs=193.2
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHHhcCC--------CCCccceEeEEE----eCCceeEEEecC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNLR--------SERLANLIGCCY----EADERLLVAEFM 67 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~~~~~~~----~~~~~~lv~e~~ 67 (423)
|+||.||++.+. +..+++|++.........+.+|+.++..++ |+||+++++++. .+...++||||+
T Consensus 48 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~lv~e~~ 127 (397)
T 1wak_A 48 GHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVL 127 (397)
T ss_dssp CSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEEEEEECCC
T ss_pred cCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceEEEEEecc
Confidence 899999999874 677999998877777788999999999995 788999999998 455789999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcC-CCeeeccCCCCCeeecCCC---------------------
Q 014484 68 PNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSK-GRALYHDLNAYRILFDKDG--------------------- 125 (423)
Q Consensus 68 ~~~~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~~iiH~dlkp~Nill~~~~--------------------- 125 (423)
+++|.+++.....+.+++..+..++.||+.||.|||++ | |+||||||+|||++.++
T Consensus 128 -~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~g-ivHrDikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (397)
T 1wak_A 128 -GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCR-IIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPP 205 (397)
T ss_dssp -CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC-EECCCCSGGGEEECCCHHHHHHHHHHHC----------
T ss_pred -CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHeeEeccchhhhhhhhhhHHHhhcCCCCC
Confidence 55777776654556799999999999999999999998 8 99999999999998775
Q ss_pred ----------------------------CeEEccccccccCCCC-CccccCcccCCccccccCCCCCCcceehhHHHHHH
Q 014484 126 ----------------------------NPRLSSFGLMKNSRDG-KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLD 176 (423)
Q Consensus 126 ----------------------------~~kl~Dfg~~~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~e 176 (423)
.++|+|||+++..... ....||+.|+|||++.+..++.++|||||||++|+
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 285 (397)
T 1wak_A 206 SGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFE 285 (397)
T ss_dssp -----------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHH
T ss_pred CCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHH
Confidence 7999999999866543 34578999999999999899999999999999999
Q ss_pred HhhCCCCCCchhhHHh-----hhchhhhhccc-------------------------------------cccCCCChhHH
Q 014484 177 LLSGKHIPPSHALDLI-----RSKNFLLLMDS-------------------------------------ALEGHFSNDEG 214 (423)
Q Consensus 177 l~~g~~~~~~~~~~~~-----~~~~~~~~~~~-------------------------------------~~~~~~~~~~~ 214 (423)
|++|..||........ ........... .....++...+
T Consensus 286 lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (397)
T 1wak_A 286 LATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEA 365 (397)
T ss_dssp HHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHH
T ss_pred HhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhhhhhcccchhhH
Confidence 9999998864321000 00000000000 00112356678
Q ss_pred HHHHHHHHHhcccCcCCCCCHHHHHHHH
Q 014484 215 TELVRLASRCLQSEARERPNAKSLVISL 242 (423)
Q Consensus 215 ~~l~~li~~cl~~dp~~Rps~~~vl~~l 242 (423)
.++.+||.+||+.||.+|||++++++|-
T Consensus 366 ~~~~~li~~~L~~dP~~Rpt~~e~l~hp 393 (397)
T 1wak_A 366 AGFTDFLLPMLELIPEKRATAAECLRHP 393 (397)
T ss_dssp HHHHHHHGGGGCSSGGGSCCHHHHHTSG
T ss_pred HHHHHHHHHHhccChhhcCCHHHHhhCc
Confidence 8999999999999999999999999874
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-40 Score=325.77 Aligned_cols=238 Identities=14% Similarity=0.141 Sum_probs=183.9
Q ss_pred CCCCccceeeee--cceeeeeecCCC---hhhHHHHHHHHHHHhcCCCCCccceEeEEEeC-----CceeEEEecCCCCC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEA-----DERLLVAEFMPNET 71 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~~~lv~e~~~~~~ 71 (423)
|+||.||++.+. +..+++|++... ......+.+|+++|+.++||||+++++++... ...|+||||+.+ +
T Consensus 37 G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e~~~~-~ 115 (432)
T 3n9x_A 37 GSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADS-D 115 (432)
T ss_dssp ETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEEECCSE-E
T ss_pred cCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEEEEecCCc-C
Confidence 899999999885 567888887543 33456889999999999999999999999876 568999999965 9
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----------
Q 014484 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---------- 141 (423)
Q Consensus 72 L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---------- 141 (423)
|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 116 L~~~~~~--~~~l~~~~~~~i~~qil~aL~~LH~~g-ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~ 192 (432)
T 3n9x_A 116 LKKLFKT--PIFLTEEHIKTILYNLLLGENFIHESG-IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLE 192 (432)
T ss_dssp HHHHHHS--SCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEEC-------------
T ss_pred HHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCHHHeEECCCCCEEEccCCCccccccccccccccccc
Confidence 9999964 457999999999999999999999999 999999999999999999999999999865432
Q ss_pred ----------------CccccCcccCCcccc-ccCCCCCCcceehhHHHHHHHhhCCCC-----------CCchhh----
Q 014484 142 ----------------KSYSTNLAFTPPEYM-RTGRVTPESVVYSFGTMLLDLLSGKHI-----------PPSHAL---- 189 (423)
Q Consensus 142 ----------------~~~~~t~~y~aPE~~-~~~~~~~~~Di~slG~~l~el~~g~~~-----------~~~~~~---- 189 (423)
....||+.|+|||++ .+..++.++|||||||++|||++|..| |++...
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p~f~g~~~~~~~ 272 (432)
T 3n9x_A 193 ENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLS 272 (432)
T ss_dssp ------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCCSCCCSCSCC--
T ss_pred ccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccccccccccCCCccccccC
Confidence 345689999999986 456699999999999999999985433 322110
Q ss_pred --------------HHh------------------hhchhhhhccc-cccCCC-----ChhHHHHHHHHHHHhcccCcCC
Q 014484 190 --------------DLI------------------RSKNFLLLMDS-ALEGHF-----SNDEGTELVRLASRCLQSEARE 231 (423)
Q Consensus 190 --------------~~~------------------~~~~~~~~~~~-~~~~~~-----~~~~~~~l~~li~~cl~~dp~~ 231 (423)
... ........+.. ...... .+..++++.+||.+||+.||.+
T Consensus 273 ~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~ 352 (432)
T 3n9x_A 273 PDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNK 352 (432)
T ss_dssp --------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSTTT
T ss_pred cccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHhcCCccc
Confidence 000 00000000000 000000 1235788999999999999999
Q ss_pred CCCHHHHHHHHH
Q 014484 232 RPNAKSLVISLM 243 (423)
Q Consensus 232 Rps~~~vl~~l~ 243 (423)
|||++++++|..
T Consensus 353 R~ta~e~L~Hp~ 364 (432)
T 3n9x_A 353 RITIDQALDHPY 364 (432)
T ss_dssp SCCHHHHHTCGG
T ss_pred CCCHHHHhcChh
Confidence 999999998854
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-40 Score=316.76 Aligned_cols=237 Identities=14% Similarity=0.149 Sum_probs=182.1
Q ss_pred CCCCccceeeee--cceeeeeecCCC---hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCC------ceeEEEecCCCC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEAD------ERLLVAEFMPNE 70 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------~~~lv~e~~~~~ 70 (423)
|+||.||.+.+. +..+++|++... ......+.+|+.+++.++||||+++++++...+ ..++||||+.+
T Consensus 36 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~lv~e~~~~- 114 (371)
T 2xrw_A 36 GAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA- 114 (371)
T ss_dssp CSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEEEEEECCSE-
T ss_pred cCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceEEEEEcCCC-
Confidence 899999999874 677888877543 334567889999999999999999999998765 67999999976
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC---CccccC
Q 014484 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTN 147 (423)
Q Consensus 71 ~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~~t 147 (423)
+|.+++. ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....||
T Consensus 115 ~l~~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt 189 (371)
T 2xrw_A 115 NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVT 189 (371)
T ss_dssp EHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCCCC----------------
T ss_pred CHHHHHh----hccCHHHHHHHHHHHHHHHHHHHHCC-eecccCCHHHEEEcCCCCEEEEEeecccccccccccCCceec
Confidence 8888884 35899999999999999999999999 999999999999999999999999999866543 345689
Q ss_pred cccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhh----------------------------
Q 014484 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLL---------------------------- 199 (423)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~---------------------------- 199 (423)
+.|+|||++.+..++.++|||||||++|+|++|..||...............
T Consensus 190 ~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (371)
T 2xrw_A 190 RYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAG 269 (371)
T ss_dssp CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCC
T ss_pred CCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccc
Confidence 9999999999889999999999999999999999998764221111000000
Q ss_pred -----hccccccCC---CChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHh
Q 014484 200 -----LMDSALEGH---FSNDEGTELVRLASRCLQSEARERPNAKSLVISLMS 244 (423)
Q Consensus 200 -----~~~~~~~~~---~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~ 244 (423)
.......+. .+...+.++.+||.+||+.||.+|||++++++|..-
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~ 322 (371)
T 2xrw_A 270 YSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 322 (371)
T ss_dssp CCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHH
T ss_pred cchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcch
Confidence 000000000 011236789999999999999999999999998654
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-40 Score=339.67 Aligned_cols=232 Identities=17% Similarity=0.252 Sum_probs=196.8
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||.+.+. +..+++|++.... .....+..|..++..+ +||||+.+++++.+.+.+|+||||++||+|.+
T Consensus 352 G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E~~~gg~L~~ 431 (674)
T 3pfq_A 352 GSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMY 431 (674)
T ss_dssp TTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEECCCSCBHHH
T ss_pred CCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEeCcCCCcHHH
Confidence 899999999985 5568888875432 2356778899999998 79999999999999999999999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCC----CCccccCccc
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNLAF 150 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~~t~~y 150 (423)
++.. .+.+++..+..++.||+.||.|||+++ |+||||||+|||++.+|++||+|||+++.... .....||+.|
T Consensus 432 ~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g-IiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~~~~~~GT~~Y 508 (674)
T 3pfq_A 432 HIQQ--VGRFKEPHAVFYAAEIAIGLFFLQSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTPDY 508 (674)
T ss_dssp HHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTS-EECCCCCSTTEEECSSSCEEECCCTTCEECCCTTCCBCCCCSCSSS
T ss_pred HHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEeccCChhhEEEcCCCcEEEeecceeeccccCCcccccccCCCcc
Confidence 9964 356999999999999999999999999 99999999999999999999999999985432 2346789999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcC
Q 014484 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (423)
Q Consensus 151 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (423)
+|||++.+..++.++|||||||++|||++|..||........ ...+... ...++..+++++.+||.+||+.||.
T Consensus 509 ~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~----~~~i~~~--~~~~p~~~s~~~~~li~~lL~~dP~ 582 (674)
T 3pfq_A 509 IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL----FQSIMEH--NVAYPKSMSKEAVAICKGLMTKHPG 582 (674)
T ss_dssp CCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHSS--CCCCCTTSCHHHHHHHHHHSCSSST
T ss_pred cCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHH----HHHHHhC--CCCCCccCCHHHHHHHHHHccCCHH
Confidence 999999999999999999999999999999999977532222 2222221 2345667888999999999999999
Q ss_pred CCCCH-----HHHHHHH
Q 014484 231 ERPNA-----KSLVISL 242 (423)
Q Consensus 231 ~Rps~-----~~vl~~l 242 (423)
+||++ ++|++|.
T Consensus 583 ~R~~~~~~~~~ei~~h~ 599 (674)
T 3pfq_A 583 KRLGCGPEGERDIKEHA 599 (674)
T ss_dssp TCTTCSTTHHHHHHSSG
T ss_pred HCCCCCCCcHHHHhcCc
Confidence 99997 8887764
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-40 Score=309.61 Aligned_cols=246 Identities=14% Similarity=0.113 Sum_probs=192.8
Q ss_pred CCCCccceeee--ecceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEE-EeCCceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCC-YEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~--~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
|+||.||.+.+ .+..+++|++.... ....+.+|++++..++|++++..+..+ ..++..++||||+ +++|.+++..
T Consensus 20 G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~ 97 (296)
T 4hgt_A 20 GSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNF 97 (296)
T ss_dssp CSSSEEEEEEETTTTEEEEEEEEEC----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHH
T ss_pred CCCeEEEEEEEcCCCceEEEEeecccc-cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc-CCCHHHHHHH
Confidence 89999999996 46778888754443 234688999999999988866666555 6667789999999 8899999864
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeee---cCCCCeEEccccccccCCCC-----------Ccc
Q 014484 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILF---DKDGNPRLSSFGLMKNSRDG-----------KSY 144 (423)
Q Consensus 79 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~-----------~~~ 144 (423)
....+++..++.++.|++.||.|||+++ |+||||||+||++ +.++.+||+|||+++..... ...
T Consensus 98 -~~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~ 175 (296)
T 4hgt_A 98 -CSRKFSLKTVLLLADQMISRIEYIHSKN-FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNL 175 (296)
T ss_dssp -TTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCC
T ss_pred -hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccCccCCCCccccc
Confidence 3456999999999999999999999999 9999999999999 78899999999999865432 234
Q ss_pred ccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccC---CCChhHHHHHHHHH
Q 014484 145 STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEG---HFSNDEGTELVRLA 221 (423)
Q Consensus 145 ~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li 221 (423)
.||+.|+|||.+.+..++.++|||||||++|+|++|..||........ .............. .....+++++.+++
T Consensus 176 ~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 254 (296)
T 4hgt_A 176 TGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATK-RQKYERISEKKMSTPIEVLCKGYPSEFATYL 254 (296)
T ss_dssp CSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSS-SSHHHHHHHHHHHSCHHHHTTTSCHHHHHHH
T ss_pred CCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhh-hhhhhhhhcccccchhhhhhccCCHHHHHHH
Confidence 689999999999998999999999999999999999999865311100 01111111111111 11133467899999
Q ss_pred HHhcccCcCCCCCHHHHHHHHHhhhhhccCC
Q 014484 222 SRCLQSEARERPNAKSLVISLMSLQKEAEVP 252 (423)
Q Consensus 222 ~~cl~~dp~~Rps~~~vl~~l~~~~~~~~~~ 252 (423)
.+||+.||++|||++++++.|..+.......
T Consensus 255 ~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~~ 285 (296)
T 4hgt_A 255 NFCRSLRFDDKPDYSYLRQLFRNLFHRQGFS 285 (296)
T ss_dssp HHHHTSCTTCCCCHHHHHHHHHHHHHHHTCC
T ss_pred HHHHhcCCCCCCCHHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999988765443
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-41 Score=311.67 Aligned_cols=240 Identities=17% Similarity=0.227 Sum_probs=177.9
Q ss_pred CCCCccceeee--ecceeeeeecCCCh--hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhc
Q 014484 2 GGRCSKFSICW--FHCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (423)
Q Consensus 2 G~~g~v~~~~~--~~~~~~~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~ 77 (423)
|+||.||.+.+ .+..+++|++.... .....+.+|+.++..++||||+++++++...+..++||||++|++|.+++.
T Consensus 26 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~ 105 (303)
T 2vwi_A 26 GATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIK 105 (303)
T ss_dssp --CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEECCTTCBHHHHHH
T ss_pred ccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhccCCchHHHHH
Confidence 89999999987 47778888875543 335678899999999999999999999999999999999999999999986
Q ss_pred c------CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC---------C
Q 014484 78 H------WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---------K 142 (423)
Q Consensus 78 ~------~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---------~ 142 (423)
. .....+++..++.++.|++.||.|||+++ ++||||||+||+++.++.++|+|||++...... .
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 184 (303)
T 2vwi_A 106 HIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG-QIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRK 184 (303)
T ss_dssp HHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEECTTCCEEECCCHHHHHCC------------
T ss_pred HHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC-CCCCCCChhhEEEcCCCCEEEEeccchheeccCCCccchhhhc
Confidence 3 13456999999999999999999999999 999999999999999999999999998755432 2
Q ss_pred ccccCcccCCcccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhc----cccccCCCChhHHHHH
Q 014484 143 SYSTNLAFTPPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLM----DSALEGHFSNDEGTEL 217 (423)
Q Consensus 143 ~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l 217 (423)
...+|+.|+|||.+.+ ..++.++|||||||++|+|++|..||................. ...........+++++
T Consensus 185 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (303)
T 2vwi_A 185 TFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSF 264 (303)
T ss_dssp ---CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC-----CCCCCCCHHH
T ss_pred ccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCccccccccchhhhhhhHHH
Confidence 3468999999999875 5689999999999999999999998865421111110000000 0001112223456789
Q ss_pred HHHHHHhcccCcCCCCCHHHHHHHH
Q 014484 218 VRLASRCLQSEARERPNAKSLVISL 242 (423)
Q Consensus 218 ~~li~~cl~~dp~~Rps~~~vl~~l 242 (423)
.+++.+||+.||.+|||+.++++|.
T Consensus 265 ~~li~~~l~~dp~~Rps~~~ll~h~ 289 (303)
T 2vwi_A 265 RKMISLCLQKDPEKRPTAAELLRHK 289 (303)
T ss_dssp HHHHHHHCCSSGGGSCCHHHHHTST
T ss_pred HHHHHHHccCChhhCcCHHHHhhCh
Confidence 9999999999999999999999874
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-41 Score=315.63 Aligned_cols=240 Identities=18% Similarity=0.237 Sum_probs=188.2
Q ss_pred CCCCccceeeeecceeeeeecCCCh---hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICWFHCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
|+||.||.+.+.+ .+++|++.... .....+.+|+.++..++||||+++++++...+..++||||++|++|.+++..
T Consensus 44 G~~g~V~~~~~~~-~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~ 122 (319)
T 2y4i_B 44 GRFGQVYHGRWHG-EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRD 122 (319)
T ss_dssp SSSSEEEEEEESS-SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCCSEEHHHHTTS
T ss_pred CCceEEEEEEEcC-eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeecccCCcHHHHHHh
Confidence 8999999998865 46677665432 2345678899999999999999999999999999999999999999999964
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCC---------CCccccCcc
Q 014484 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD---------GKSYSTNLA 149 (423)
Q Consensus 79 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~---------~~~~~~t~~ 149 (423)
.+..+++..++.++.||+.||.|||+++ ++||||||+||+++ ++.++|+|||+++.... .....||+.
T Consensus 123 -~~~~~~~~~~~~i~~qi~~al~~lH~~~-i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~ 199 (319)
T 2y4i_B 123 -AKIVLDVNKTRQIAQEIVKGMGYLHAKG-ILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLC 199 (319)
T ss_dssp -SCCCCCSHHHHHHHHHHHHHHHHHHHTT-CCCCCCCSTTEEEC---CCEECCCSCCC----------CCSCBCCSGGGG
T ss_pred -cCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccCCChhhEEEe-CCCEEEeecCCccccccccccccccccccCCCccc
Confidence 3456999999999999999999999999 99999999999998 67999999999765431 122357899
Q ss_pred cCCcccccc---------CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHH
Q 014484 150 FTPPEYMRT---------GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRL 220 (423)
Q Consensus 150 y~aPE~~~~---------~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 220 (423)
|+|||.+.+ ..++.++|||||||++|+|++|..||.......... ...........+..++.++.++
T Consensus 200 y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~l 275 (319)
T 2y4i_B 200 HLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIW----QMGTGMKPNLSQIGMGKEISDI 275 (319)
T ss_dssp TSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHH----HHHTTCCCCCCCSSCCTTHHHH
T ss_pred ccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH----HhccCCCCCCCcCCCCHHHHHH
Confidence 999999874 347889999999999999999999887643222111 1111111111222456779999
Q ss_pred HHHhcccCcCCCCCHHHHHHHHHhhhhhc
Q 014484 221 ASRCLQSEARERPNAKSLVISLMSLQKEA 249 (423)
Q Consensus 221 i~~cl~~dp~~Rps~~~vl~~l~~~~~~~ 249 (423)
+.+||+.||.+|||+.++++.|+.+....
T Consensus 276 i~~~l~~~p~~Rpt~~~l~~~l~~l~~~~ 304 (319)
T 2y4i_B 276 LLFCWAFEQEERPTFTKLMDMLEKLPKRN 304 (319)
T ss_dssp HHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred HHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence 99999999999999999999999887663
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-40 Score=311.22 Aligned_cols=238 Identities=19% Similarity=0.201 Sum_probs=186.9
Q ss_pred CCCCccceeeee--cceeeeeecCCChh---hHHHHHHHHHHHhcCCCCCccceEeEEEeC--------CceeEEEecCC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDL---GETLNLEEAKAVGNLRSERLANLIGCCYEA--------DERLLVAEFMP 68 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--------~~~~lv~e~~~ 68 (423)
|+||.||.+.+. +..+++|++..... ....+.+|++++..++||||+++++++... +..++||||+.
T Consensus 28 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~ 107 (351)
T 3mi9_A 28 GTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCE 107 (351)
T ss_dssp CSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------CEEEEEEECCS
T ss_pred CCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCceEEEEEeccC
Confidence 899999999984 67788887744332 245778999999999999999999999874 45899999998
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-------
Q 014484 69 NETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------- 141 (423)
Q Consensus 69 ~~~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~------- 141 (423)
+ +|.+.+.. ....+++..+..++.||+.||.|||++| |+||||||+|||++.++.+||+|||+++.....
T Consensus 108 ~-~l~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 184 (351)
T 3mi9_A 108 H-DLAGLLSN-VLVKFTLSEIKRVMQMLLNGLYYIHRNK-ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR 184 (351)
T ss_dssp E-EHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCCCSSSSCCC
T ss_pred C-CHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCHHHEEEcCCCCEEEccchhcccccccccccccc
Confidence 6 77777754 3456999999999999999999999999 999999999999999999999999999765421
Q ss_pred -CccccCcccCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCCh--------
Q 014484 142 -KSYSTNLAFTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSN-------- 211 (423)
Q Consensus 142 -~~~~~t~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 211 (423)
....||+.|+|||++.+. .++.++|||||||++|+|++|..||........... +...........++.
T Consensus 185 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~ 263 (351)
T 3mi9_A 185 YTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLAL-ISQLCGSITPEVWPNVDNYELYE 263 (351)
T ss_dssp CCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH-HHHHHCCCCTTTSTTGGGCGGGT
T ss_pred cCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHH-HHHHhCCCChhhccccccchhhc
Confidence 234579999999998764 589999999999999999999998876432211111 111100000000000
Q ss_pred -------------------hHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 212 -------------------DEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 212 -------------------~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
..++++.+||.+||+.||.+|||++++++|-.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 314 (351)
T 3mi9_A 264 KLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDF 314 (351)
T ss_dssp SSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred ccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCC
Confidence 01467899999999999999999999998854
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-40 Score=303.79 Aligned_cols=233 Identities=16% Similarity=0.162 Sum_probs=188.1
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.+. +..+++|++.... .....+.+|+.+++.++||||+++++++...+..++||||+++++|.++
T Consensus 22 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 101 (276)
T 2h6d_A 22 GTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDY 101 (276)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHH
T ss_pred CCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEeccCCCcHHHH
Confidence 899999999885 6778888875433 2245788999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC---CccccCcccCC
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTP 152 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~~t~~y~a 152 (423)
+.. .+.+++..++.++.|++.||.|||+++ ++||||||+||+++.++.++|+|||++...... ....+|+.|+|
T Consensus 102 l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~y~a 178 (276)
T 2h6d_A 102 ICK--HGRVEEMEARRLFQQILSAVDYCHRHM-VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAA 178 (276)
T ss_dssp HHH--HCSCCHHHHHHHHHHHHHHHHHHHHHC-SSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-------------CC
T ss_pred Hhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCChhhEEECCCCCEEEeecccccccCCCcceecccCCccccC
Confidence 964 356999999999999999999999999 999999999999999999999999999876543 23467899999
Q ss_pred ccccccCCC-CCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCC
Q 014484 153 PEYMRTGRV-TPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARE 231 (423)
Q Consensus 153 PE~~~~~~~-~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (423)
||.+.+..+ +.++||||||+++|+|++|..||......... ..... .....+..++.++.++|.+||+.||.+
T Consensus 179 PE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~----~~~~~--~~~~~~~~~~~~l~~li~~~l~~~p~~ 252 (276)
T 2h6d_A 179 PEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLF----KKIRG--GVFYIPEYLNRSVATLLMHMLQVDPLK 252 (276)
T ss_dssp TGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHH--CCCCCCTTSCHHHHHHHHHHTCSSGGG
T ss_pred HHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHH----HHhhc--CcccCchhcCHHHHHHHHHHccCChhh
Confidence 999987765 68999999999999999999888654222111 11111 112244556788999999999999999
Q ss_pred CCCHHHHHHHHH
Q 014484 232 RPNAKSLVISLM 243 (423)
Q Consensus 232 Rps~~~vl~~l~ 243 (423)
|||++++++|..
T Consensus 253 Rps~~~~l~h~~ 264 (276)
T 2h6d_A 253 RATIKDIREHEW 264 (276)
T ss_dssp SCCHHHHHHSHH
T ss_pred CCCHHHHHhChh
Confidence 999999999854
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-40 Score=315.04 Aligned_cols=239 Identities=16% Similarity=0.157 Sum_probs=178.3
Q ss_pred CCCCccceeee--ecceeeeeecCCCh-hhHHHHHHHHHHHhcCC-CCCccceEeEEEe--------CCceeEEEecCCC
Q 014484 2 GGRCSKFSICW--FHCHLKSSVLESSD-LGETLNLEEAKAVGNLR-SERLANLIGCCYE--------ADERLLVAEFMPN 69 (423)
Q Consensus 2 G~~g~v~~~~~--~~~~~~~~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~--------~~~~~lv~e~~~~ 69 (423)
|+||.||++.+ .+..+++|++.... .....+.+|+.++.++. ||||+++++++.. ....++||||+.
T Consensus 39 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~- 117 (337)
T 3ll6_A 39 GGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCK- 117 (337)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEEEECCS-
T ss_pred CCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceEEEEEEecC-
Confidence 89999999998 46778888764433 44667889999999995 9999999999953 334789999996
Q ss_pred CCHHhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHHcCC-CeeeccCCCCCeeecCCCCeEEccccccccCCCCC-----
Q 014484 70 ETLAKHLFH-WETQPMKWAMRLRVALYLAQALEYCSSKG-RALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK----- 142 (423)
Q Consensus 70 ~~L~~~i~~-~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~----- 142 (423)
|+|.+++.. ...+.+++..++.++.||+.||.|||+++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 118 g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 197 (337)
T 3ll6_A 118 GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWS 197 (337)
T ss_dssp EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBCCSSCC-----
T ss_pred CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCccceeccccCccccc
Confidence 599888853 23456999999999999999999999975 49999999999999999999999999998655321
Q ss_pred -----------ccccCcccCCcccc---ccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCC
Q 014484 143 -----------SYSTNLAFTPPEYM---RTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGH 208 (423)
Q Consensus 143 -----------~~~~t~~y~aPE~~---~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (423)
...+|+.|+|||++ .+..++.++|||||||++|+|++|..||...... ..........
T Consensus 198 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--------~~~~~~~~~~ 269 (337)
T 3ll6_A 198 AQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL--------RIVNGKYSIP 269 (337)
T ss_dssp --------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--------------------CCCC
T ss_pred ccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH--------HhhcCcccCC
Confidence 33478999999998 5566889999999999999999999988653211 1111122222
Q ss_pred CChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhhhc
Q 014484 209 FSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEA 249 (423)
Q Consensus 209 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~~~~~ 249 (423)
.+...+..+.+++.+||+.||.+|||+.+++++|..+....
T Consensus 270 ~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~ 310 (337)
T 3ll6_A 270 PHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAAR 310 (337)
T ss_dssp TTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred cccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence 23334567999999999999999999999999999987653
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-40 Score=309.16 Aligned_cols=234 Identities=16% Similarity=0.201 Sum_probs=188.1
Q ss_pred CCCCccceeeee--cceeeeeecCCCh-hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
|+||.||.+.+. +..+++|++.... .....+.+|++++..++||||+++++++..++..++||||+++++|.+++..
T Consensus 30 G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~ 109 (302)
T 2j7t_A 30 GAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLE 109 (302)
T ss_dssp STTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCTTEEHHHHHHH
T ss_pred CCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCCCCcHHHHHHh
Confidence 899999999985 6678888775543 3467889999999999999999999999999999999999999999998864
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCC----CCCccccCcccCCcc
Q 014484 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSR----DGKSYSTNLAFTPPE 154 (423)
Q Consensus 79 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~----~~~~~~~t~~y~aPE 154 (423)
....+++..++.++.|++.||.|||+++ ++||||||+||+++.++.++|+|||++.... ......||+.|+|||
T Consensus 110 -~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE 187 (302)
T 2j7t_A 110 -LDRGLTEPQIQVVCRQMLEALNFLHSKR-IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPE 187 (302)
T ss_dssp -HTSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC-----CCGGGCCHH
T ss_pred -hccCCCHHHHHHHHHHHHHHHHHHhcCC-cccCCCCHHHEEECCCCCEEEEECCCCccccccccccccccCChhhcCCe
Confidence 2456999999999999999999999999 9999999999999999999999999875322 234457899999999
Q ss_pred ccc-----cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhcccc-ccCCCChhHHHHHHHHHHHhcccC
Q 014484 155 YMR-----TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSA-LEGHFSNDEGTELVRLASRCLQSE 228 (423)
Q Consensus 155 ~~~-----~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~d 228 (423)
.+. +..++.++|||||||++|+|++|..|+........ ........ .....+..++.++.++|.+||+.|
T Consensus 188 ~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d 263 (302)
T 2j7t_A 188 VVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV----LLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKN 263 (302)
T ss_dssp HHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH----HHHHHHSCCCCCSSGGGSCHHHHHHHHHHSCSC
T ss_pred eeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHH----HHHHhccCCcccCCccccCHHHHHHHHHHcccC
Confidence 883 56789999999999999999999988865422111 11111111 111234456788999999999999
Q ss_pred cCCCCCHHHHHHH
Q 014484 229 ARERPNAKSLVIS 241 (423)
Q Consensus 229 p~~Rps~~~vl~~ 241 (423)
|.+|||+.++++|
T Consensus 264 p~~Rps~~~ll~h 276 (302)
T 2j7t_A 264 PETRPSAAQLLEH 276 (302)
T ss_dssp TTTSCCHHHHTTS
T ss_pred hhhCCCHHHHhcC
Confidence 9999999999876
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-41 Score=326.79 Aligned_cols=229 Identities=13% Similarity=0.077 Sum_probs=180.2
Q ss_pred CCCCccceeeee--cceeeeeecCC----ChhhHHHHHHHH---HHHhcCCCCCccceE-------eEEEeCCc------
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLES----SDLGETLNLEEA---KAVGNLRSERLANLI-------GCCYEADE------ 59 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~----~~~~~~~~~~E~---~~l~~l~h~niv~~~-------~~~~~~~~------ 59 (423)
|+||.||++.+. +..+++|++.. .....+.+.+|+ +++..++||||++++ +++...+.
T Consensus 84 G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~ 163 (377)
T 3byv_A 84 EDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRV 163 (377)
T ss_dssp ETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTSCSEEEC
T ss_pred CCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCCcccccc
Confidence 899999999974 78899998753 333467888999 555566899999998 77665542
Q ss_pred -----------eeEEEecCCCCCHHhhhccCC-----CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecC
Q 014484 60 -----------RLLVAEFMPNETLAKHLFHWE-----TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK 123 (423)
Q Consensus 60 -----------~~lv~e~~~~~~L~~~i~~~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~ 123 (423)
.|+||||+ +|+|.+++.... ...+++..++.++.||+.||.|||+++ |+||||||+|||++.
T Consensus 164 ~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivHrDikp~NIll~~ 241 (377)
T 3byv_A 164 RLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG-LVHTYLRPVDIVLDQ 241 (377)
T ss_dssp ------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECT
T ss_pred ccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcC
Confidence 78999999 679999996421 112335888899999999999999999 999999999999999
Q ss_pred CCCeEEccccccccCCCC-CccccCcccCCccccccC-----------CCCCCcceehhHHHHHHHhhCCCCCCchhhHH
Q 014484 124 DGNPRLSSFGLMKNSRDG-KSYSTNLAFTPPEYMRTG-----------RVTPESVVYSFGTMLLDLLSGKHIPPSHALDL 191 (423)
Q Consensus 124 ~~~~kl~Dfg~~~~~~~~-~~~~~t~~y~aPE~~~~~-----------~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~ 191 (423)
++.+||+|||+++..... ....| +.|+|||++.+. .++.++|||||||++|||++|..||......
T Consensus 242 ~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~- 319 (377)
T 3byv_A 242 RGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAAL- 319 (377)
T ss_dssp TCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC-------
T ss_pred CCCEEEEechhheecCCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccc-
Confidence 999999999999875543 23456 999999999887 7999999999999999999999988653211
Q ss_pred hhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 192 IRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
........ ....+++++.++|.+||+.||.+|||+.++++|..
T Consensus 320 ---~~~~~~~~------~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~ 362 (377)
T 3byv_A 320 ---GGSEWIFR------SCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPE 362 (377)
T ss_dssp ---CCSGGGGS------SCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHH
T ss_pred ---cchhhhhh------hccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChH
Confidence 11111111 12345678999999999999999999999998743
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-40 Score=318.62 Aligned_cols=237 Identities=16% Similarity=0.184 Sum_probs=174.2
Q ss_pred CCCCccceeeee--cceeeeeecCCC---hhhHHHHHHHHHHHhcCCCCCccceEeEEEeC------CceeEEEecCCCC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEA------DERLLVAEFMPNE 70 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~~~~lv~e~~~~~ 70 (423)
|+||.||.+.+. +..+++|++... ......+.+|+++++.++||||+++++++... ...++|||++ ++
T Consensus 40 G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~lv~e~~-~~ 118 (367)
T 2fst_X 40 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GA 118 (367)
T ss_dssp ---CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEECC-CE
T ss_pred cCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEEEEeccc-CC
Confidence 899999999864 777888887543 23456788999999999999999999999764 4579999999 67
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-CccccCcc
Q 014484 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSYSTNLA 149 (423)
Q Consensus 71 ~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~~t~~ 149 (423)
+|.+++. .+.+++..+..++.||+.||.|||++| |+||||||+|||++.++.+||+|||+++..... ....+|+.
T Consensus 119 ~L~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~ 194 (367)
T 2fst_X 119 DLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRW 194 (367)
T ss_dssp ECC--------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECC---------------CCCT
T ss_pred CHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHhhEEECCCCCEEEeeccccccccccCCCcCcCcC
Confidence 9999884 357999999999999999999999999 999999999999999999999999999876543 34578999
Q ss_pred cCCcccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhh----------------------hhcccccc
Q 014484 150 FTPPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFL----------------------LLMDSALE 206 (423)
Q Consensus 150 y~aPE~~~~-~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~ 206 (423)
|+|||++.+ ..++.++|||||||++|+|++|..||.+............ ........
T Consensus 195 y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (367)
T 2fst_X 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 274 (367)
T ss_dssp TCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCC
T ss_pred ccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCC
Confidence 999999886 5789999999999999999999999876432111110000 00000000
Q ss_pred CC---CChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 207 GH---FSNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 207 ~~---~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
.. .....++++.+||.+||+.||.+|||++++++|..
T Consensus 275 ~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~ 314 (367)
T 2fst_X 275 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 314 (367)
T ss_dssp CCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred CCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChh
Confidence 00 01134678999999999999999999999998854
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-40 Score=312.13 Aligned_cols=233 Identities=14% Similarity=0.138 Sum_probs=185.5
Q ss_pred CCCCccceeeee--cceeeeeecCCChh---------hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDL---------GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNE 70 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~---------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~ 70 (423)
|+||.||.+.+. +..+++|++..... ....+.+|++++..++||||+++++++..+. .++||||++++
T Consensus 21 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~~lv~e~~~~~ 99 (322)
T 2ycf_A 21 GACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGG 99 (322)
T ss_dssp CSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-EEEEEECCTTE
T ss_pred CCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-eEEEEecCCCC
Confidence 899999999885 56788888755331 2345789999999999999999999987665 89999999999
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCC---eEEccccccccCCCCC---cc
Q 014484 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGN---PRLSSFGLMKNSRDGK---SY 144 (423)
Q Consensus 71 ~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~---~kl~Dfg~~~~~~~~~---~~ 144 (423)
+|.+++.. ...+++..++.++.||+.||.|||+++ |+||||||+||+++.++. +||+|||+++...... ..
T Consensus 100 ~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 176 (322)
T 2ycf_A 100 ELFDKVVG--NKRLKEATCKLYFYQMLLAVQYLHENG-IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL 176 (322)
T ss_dssp ETHHHHST--TCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESSSSSSCCEEECCCTTCEECCCCHHHHHH
T ss_pred cHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEEecCCCCCeEEEccCccceecccccccccc
Confidence 99999853 567999999999999999999999999 999999999999987654 9999999998765542 34
Q ss_pred ccCcccCCccccc---cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCC---ChhHHHHHH
Q 014484 145 STNLAFTPPEYMR---TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHF---SNDEGTELV 218 (423)
Q Consensus 145 ~~t~~y~aPE~~~---~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~ 218 (423)
.||+.|+|||++. ...++.++|||||||++|+|++|..||...... ......+........ ...+++++.
T Consensus 177 ~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (322)
T 2ycf_A 177 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ----VSLKDQITSGKYNFIPEVWAEVSEKAL 252 (322)
T ss_dssp HSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCS----SCHHHHHHHTCCCCCHHHHTTSCHHHH
T ss_pred cCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchH----HHHHHHHHhCccccCchhhhhcCHHHH
Confidence 5899999999874 456899999999999999999999988653211 011111111111111 123567899
Q ss_pred HHHHHhcccCcCCCCCHHHHHHHH
Q 014484 219 RLASRCLQSEARERPNAKSLVISL 242 (423)
Q Consensus 219 ~li~~cl~~dp~~Rps~~~vl~~l 242 (423)
++|.+||+.||.+|||+.++++|.
T Consensus 253 ~li~~~l~~dP~~Rps~~~~l~h~ 276 (322)
T 2ycf_A 253 DLVKKLLVVDPKARFTTEEALRHP 276 (322)
T ss_dssp HHHHHHSCSSTTTSCCHHHHHTSG
T ss_pred HHHHHHcccCHhhCCCHHHHhhCc
Confidence 999999999999999999999874
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-40 Score=336.55 Aligned_cols=239 Identities=19% Similarity=0.235 Sum_probs=195.6
Q ss_pred CCCCccceeeee-----cceeeeeecCCC--hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF-----HCHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~-----~~~~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||.+.+. +..+++|.+... ....+.+.+|+.++..++||||+++++++. ++..++||||+++|+|.+
T Consensus 401 G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~lv~E~~~~g~L~~ 479 (656)
T 2j0j_A 401 GQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRS 479 (656)
T ss_dssp CSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTTCBHHH
T ss_pred CCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEEEEEcCCCCcHHH
Confidence 899999999884 244677766543 334578899999999999999999999985 456899999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC-----ccccCcc
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-----SYSTNLA 149 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-----~~~~t~~ 149 (423)
++.. .+..+++..++.++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++...... ...+|+.
T Consensus 480 ~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~t~~ 557 (656)
T 2j0j_A 480 FLQV-RKFSLDLASLILYAYQLSTALAYLESKR-FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 557 (656)
T ss_dssp HHHH-TTTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCCCCCCSCCC----------CCGG
T ss_pred HHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccccchHhEEEeCCCCEEEEecCCCeecCCCcceeccCCCCCcc
Confidence 9964 3446999999999999999999999999 9999999999999999999999999998765432 2345788
Q ss_pred cCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccC
Q 014484 150 FTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSE 228 (423)
Q Consensus 150 y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 228 (423)
|+|||.+.+..++.++|||||||++|||++ |..||....... ....+........+..+++++.+++.+||+.|
T Consensus 558 y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~-----~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~d 632 (656)
T 2j0j_A 558 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND-----VIGRIENGERLPMPPNCPPTLYSLMTKCWAYD 632 (656)
T ss_dssp GCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-----HHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred eeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHH-----HHHHHHcCCCCCCCccccHHHHHHHHHHcCCC
Confidence 999999998899999999999999999997 887876542221 11112222233455667889999999999999
Q ss_pred cCCCCCHHHHHHHHHhhhhh
Q 014484 229 ARERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 229 p~~Rps~~~vl~~l~~~~~~ 248 (423)
|.+|||+.++++.|..+...
T Consensus 633 P~~RPs~~el~~~L~~il~~ 652 (656)
T 2j0j_A 633 PSRRPRFTELKAQLSTILEE 652 (656)
T ss_dssp GGGSCCHHHHHHHHHHHHHH
T ss_pred hhHCcCHHHHHHHHHHHHHH
Confidence 99999999999999987643
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-40 Score=314.92 Aligned_cols=234 Identities=9% Similarity=0.065 Sum_probs=192.5
Q ss_pred CCCCccceeee-------ecceeeeeecCCChhhHHHHHHHHHHHhcCC---CCCccceEeEEEeCCceeEEEecCCCCC
Q 014484 2 GGRCSKFSICW-------FHCHLKSSVLESSDLGETLNLEEAKAVGNLR---SERLANLIGCCYEADERLLVAEFMPNET 71 (423)
Q Consensus 2 G~~g~v~~~~~-------~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e~~~~~~ 71 (423)
|+||.||++.+ .+..+++|++.... ...+..|++++..++ |+||+.+++++..++..++||||++||+
T Consensus 76 G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~g~ 153 (365)
T 3e7e_A 76 GAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN--PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGT 153 (365)
T ss_dssp CSSEEEEEEEC-------CCCCEEEEEESSCC--HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEEECCCCSCB
T ss_pred cCCEEEEEEEecCCcccccCcEEEEEEeCCCC--hhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEEEEeccCCCc
Confidence 89999999942 36778888876543 456778888888886 8999999999999999999999999999
Q ss_pred HHhhhccC---CCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecC-----------CCCeEEcccccccc
Q 014484 72 LAKHLFHW---ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK-----------DGNPRLSSFGLMKN 137 (423)
Q Consensus 72 L~~~i~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~-----------~~~~kl~Dfg~~~~ 137 (423)
|.+++... ....+++..++.++.||+.||.|||+++ |+||||||+|||++. ++.+||+|||+++.
T Consensus 154 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~-ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~ 232 (365)
T 3e7e_A 154 LLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE-IIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSID 232 (365)
T ss_dssp HHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCSGGGEEECGGGTCC------CTTEEECCCTTCEE
T ss_pred HHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC-eecCCCCHHHEEecccccCccccccccCCEEEeeCchhhh
Confidence 99999631 3567999999999999999999999999 999999999999988 89999999999965
Q ss_pred CC---C---CCccccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCCh
Q 014484 138 SR---D---GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSN 211 (423)
Q Consensus 138 ~~---~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (423)
.. . .....||+.|+|||++.+..++.++|||||||++|||+||..||....... ....... ...
T Consensus 233 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~-------~~~~~~~-~~~-- 302 (365)
T 3e7e_A 233 MKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE-------CKPEGLF-RRL-- 302 (365)
T ss_dssp GGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE-------EEECSCC-TTC--
T ss_pred hhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc-------eeechhc-ccc--
Confidence 43 1 134568999999999999899999999999999999999998876531110 0011111 111
Q ss_pred hHHHHHHHHHHHhcccCcCCC-CCHHHHHHHHHhhhhh
Q 014484 212 DEGTELVRLASRCLQSEARER-PNAKSLVISLMSLQKE 248 (423)
Q Consensus 212 ~~~~~l~~li~~cl~~dp~~R-ps~~~vl~~l~~~~~~ 248 (423)
..++.+.+++.+||..+|.+| |+++++.+.|..+...
T Consensus 303 ~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~ 340 (365)
T 3e7e_A 303 PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ 340 (365)
T ss_dssp SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence 236789999999999999999 7888888888877654
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-40 Score=305.04 Aligned_cols=234 Identities=16% Similarity=0.159 Sum_probs=192.4
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----------hhHHHHHHHHHHHhcCC-CCCccceEeEEEeCCceeEEEecCC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----------LGETLNLEEAKAVGNLR-SERLANLIGCCYEADERLLVAEFMP 68 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----------~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~ 68 (423)
|+||.||.+.+. +..+++|++.... .....+.+|++++.++. ||||+++++++..++..++||||++
T Consensus 28 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~ 107 (298)
T 1phk_A 28 GVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMK 107 (298)
T ss_dssp CSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred CCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCeEEEEEeccC
Confidence 899999999984 5678888775432 23457789999999995 9999999999999999999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC---Cccc
Q 014484 69 NETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYS 145 (423)
Q Consensus 69 ~~~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~ 145 (423)
+++|.+++.. ...+++..++.++.||+.||.|||+++ ++||||||+||+++.++.++|+|||++...... ....
T Consensus 108 ~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 184 (298)
T 1phk_A 108 KGELFDYLTE--KVTLSEKETRKIMRALLEVICALHKLN-IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVC 184 (298)
T ss_dssp TCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECCTTCCBCCCC
T ss_pred CCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCcceEEEcCCCcEEEecccchhhcCCCccccccc
Confidence 9999999964 457999999999999999999999999 999999999999999999999999999866543 3346
Q ss_pred cCcccCCccccc------cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhcccc--ccCCCChhHHHHH
Q 014484 146 TNLAFTPPEYMR------TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSA--LEGHFSNDEGTEL 217 (423)
Q Consensus 146 ~t~~y~aPE~~~------~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l 217 (423)
+++.|+|||.+. ...++.++|||||||++|+|++|..||.......... ...... ........++.++
T Consensus 185 ~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l 260 (298)
T 1phk_A 185 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLR----MIMSGNYQFGSPEWDDYSDTV 260 (298)
T ss_dssp SCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH----HHHHTCCCCCTTTGGGSCHHH
T ss_pred CCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHH----HHhcCCcccCcccccccCHHH
Confidence 899999999885 4468899999999999999999998886543221111 111111 1111223567889
Q ss_pred HHHHHHhcccCcCCCCCHHHHHHHH
Q 014484 218 VRLASRCLQSEARERPNAKSLVISL 242 (423)
Q Consensus 218 ~~li~~cl~~dp~~Rps~~~vl~~l 242 (423)
.+++.+||+.||.+|||+.++++|-
T Consensus 261 ~~li~~~l~~dp~~Rps~~~ll~h~ 285 (298)
T 1phk_A 261 KDLVSRFLVVQPQKRYTAEEALAHP 285 (298)
T ss_dssp HHHHHHHCCSSGGGSCCHHHHTTSG
T ss_pred HHHHHHHccCCcccCCCHHHHHhCh
Confidence 9999999999999999999999764
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-40 Score=309.13 Aligned_cols=234 Identities=16% Similarity=0.184 Sum_probs=188.0
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHHhcCC-CCCccceEeEEEe--CCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNLR-SERLANLIGCCYE--ADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~--~~~~~lv~e~~~~~~L~~~i 76 (423)
|+||.||.+.+. +..+++|++.... ...+.+|++++..++ ||||+++++++.. ....++||||+.+++|.+++
T Consensus 47 G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~ 124 (330)
T 3nsz_A 47 GKYSEVFEAINITNNEKVVVKILKPVK--KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY 124 (330)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEECSCC--HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCCCCCHHHHG
T ss_pred cCCeEEEEEEECCCCcEEEEEEecccc--hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccCchhHHHHH
Confidence 899999999873 6788888876543 467889999999996 9999999999998 56689999999999999988
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCC-CeEEccccccccCCCC---CccccCcccCC
Q 014484 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG-NPRLSSFGLMKNSRDG---KSYSTNLAFTP 152 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~-~~kl~Dfg~~~~~~~~---~~~~~t~~y~a 152 (423)
. .+++..+..++.||+.||.|||+++ |+||||||+|||++.++ .++|+|||+++..... ....+|..|+|
T Consensus 125 ~-----~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~y~a 198 (330)
T 3nsz_A 125 Q-----TLTDYDIRFYMYEILKALDYCHSMG-IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG 198 (330)
T ss_dssp G-----GCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSCCSCGGGCC
T ss_pred H-----hCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCccccccccccccC
Confidence 4 3899999999999999999999999 99999999999999777 7999999999865433 34568899999
Q ss_pred cccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhh---------chhhhhc---------------------
Q 014484 153 PEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRS---------KNFLLLM--------------------- 201 (423)
Q Consensus 153 PE~~~~-~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~---------~~~~~~~--------------------- 201 (423)
||.+.+ ..++.++|||||||++|+|++|..||.......... ......+
T Consensus 199 PE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (330)
T 3nsz_A 199 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRK 278 (330)
T ss_dssp HHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCC
T ss_pred hhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhhhhcccc
Confidence 999877 568999999999999999999998884321110000 0000000
Q ss_pred --cccccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 202 --DSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 202 --~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
........+..+++++.+||.+||+.||.+|||++++++|..
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~ 322 (330)
T 3nsz_A 279 RWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 322 (330)
T ss_dssp CGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGG
T ss_pred chhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCcc
Confidence 000111122336788999999999999999999999998743
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-40 Score=305.90 Aligned_cols=239 Identities=15% Similarity=0.207 Sum_probs=180.6
Q ss_pred CCCCccceeee--ecceeeeeecCCCh--hh-HHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICW--FHCHLKSSVLESSD--LG-ETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~--~~~~~~~~~~~~~~--~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
|+||.||.+.+ .+..+++|++.... .. ...+.++...++.++||||+++++++..++..++||||++| +|.+++
T Consensus 18 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l 96 (290)
T 3fme_A 18 GAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDT-SLDKFY 96 (290)
T ss_dssp CSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECCSE-EHHHHH
T ss_pred CCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehhcc-chHHHH
Confidence 89999999998 47778888876542 22 23344555568888999999999999999999999999975 887776
Q ss_pred cc--CCCCCCCHHHHHHHHHHHHHHHHHHHcC-CCeeeccCCCCCeeecCCCCeEEccccccccCCCC---CccccCccc
Q 014484 77 FH--WETQPMKWAMRLRVALYLAQALEYCSSK-GRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAF 150 (423)
Q Consensus 77 ~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~~t~~y 150 (423)
.. ..+..+++..++.++.|++.||.|||++ + ++||||||+||+++.++.++|+|||+++..... ....||+.|
T Consensus 97 ~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y 175 (290)
T 3fme_A 97 KQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS-VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPY 175 (290)
T ss_dssp HHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSC-CCCCCCSGGGCEECTTCCEEBCCC---------------CCCCCC
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC-eecCCCCHHHEEECCCCCEEEeecCCcccccccccccccCCCccc
Confidence 42 2456799999999999999999999998 9 999999999999999999999999998765543 234689999
Q ss_pred CCcccc----ccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcc
Q 014484 151 TPPEYM----RTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (423)
Q Consensus 151 ~aPE~~----~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (423)
+|||.+ .+..++.++|||||||++|+|++|..||....... ...............+..+++++.+++.+||+
T Consensus 176 ~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 252 (290)
T 3fme_A 176 MAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPF---QQLKQVVEEPSPQLPADKFSAEFVDFTSQCLK 252 (290)
T ss_dssp SCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHH---HHHHHHHHSCCCCCCTTTSCHHHHHHHHHHTC
T ss_pred cChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchH---HHHHHHhccCCCCcccccCCHHHHHHHHHHhh
Confidence 999996 45568899999999999999999999886432111 11222222222222334567889999999999
Q ss_pred cCcCCCCCHHHHHHHHHhh
Q 014484 227 SEARERPNAKSLVISLMSL 245 (423)
Q Consensus 227 ~dp~~Rps~~~vl~~l~~~ 245 (423)
.||.+|||+.++++|..-.
T Consensus 253 ~~p~~Rpt~~e~l~hp~f~ 271 (290)
T 3fme_A 253 KNSKERPTYPELMQHPFFT 271 (290)
T ss_dssp SSGGGSCCHHHHTTSHHHH
T ss_pred cChhhCcCHHHHHhCcccc
Confidence 9999999999999876543
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-40 Score=313.62 Aligned_cols=243 Identities=16% Similarity=0.214 Sum_probs=174.0
Q ss_pred CCCCccceeeee--cceeeeeecCCC--hhhHHHHHHHHH-HHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS--DLGETLNLEEAK-AVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~--~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
|+||.||.+.+. +..+++|++... ......+..|+. +++.++||||+++++++..++..++||||+.+ +|.+++
T Consensus 33 G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~~-~l~~~~ 111 (327)
T 3aln_A 33 GAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMST-SFDKFY 111 (327)
T ss_dssp CSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCSE-EHHHHH
T ss_pred CCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecCC-ChHHHH
Confidence 899999999985 777888877553 233455666666 77778999999999999999999999999986 887777
Q ss_pred cc---CCCCCCCHHHHHHHHHHHHHHHHHHHcC-CCeeeccCCCCCeeecCCCCeEEccccccccCCCC---CccccCcc
Q 014484 77 FH---WETQPMKWAMRLRVALYLAQALEYCSSK-GRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLA 149 (423)
Q Consensus 77 ~~---~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~~t~~ 149 (423)
.. .....+++..+..++.|++.||.|||++ + ++||||||+||+++.++.+||+|||+++..... ....||+.
T Consensus 112 ~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~-ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~ 190 (327)
T 3aln_A 112 KYVYSVLDDVIPEEILGKITLATVKALNHLKENLK-IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRP 190 (327)
T ss_dssp HHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS-CCCSCCCGGGEEEETTTEEEECCCSSSCC---------------
T ss_pred HHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC-EeECCCCHHHEEEcCCCCEEEccCCCceecccccccccCCCCcc
Confidence 42 2356799999999999999999999999 9 999999999999999999999999999766543 22368999
Q ss_pred cCCcccc----ccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhc
Q 014484 150 FTPPEYM----RTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCL 225 (423)
Q Consensus 150 y~aPE~~----~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 225 (423)
|+|||.+ .+..++.++|||||||++|+|++|..||............................+++++.+++.+||
T Consensus 191 y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 270 (327)
T 3aln_A 191 YMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCL 270 (327)
T ss_dssp ---------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHT
T ss_pred ccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHh
Confidence 9999998 456689999999999999999999998875321111001111111111111222346788999999999
Q ss_pred ccCcCCCCCHHHHHHHHHhhh
Q 014484 226 QSEARERPNAKSLVISLMSLQ 246 (423)
Q Consensus 226 ~~dp~~Rps~~~vl~~l~~~~ 246 (423)
+.||.+|||+.+++++..-..
T Consensus 271 ~~dp~~Rps~~ell~hp~~~~ 291 (327)
T 3aln_A 271 TKDESKRPKYKELLKHPFILM 291 (327)
T ss_dssp CSSGGGSCCHHHHTTSHHHHH
T ss_pred hCChhhCcCHHHHHhChHHHH
Confidence 999999999999998865443
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-40 Score=312.67 Aligned_cols=239 Identities=13% Similarity=0.106 Sum_probs=168.7
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEe----CCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYE----ADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.+. +..+++|++......... ....+..+.||||+++++++.. +...++||||++||+|.++
T Consensus 40 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~e---~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~ 116 (336)
T 3fhr_A 40 GVNGKVLECFHRRTGQKCALKLLYDSPKARQE---VDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSR 116 (336)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEESSHHHHHH---HHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCTTEEHHHH
T ss_pred CCCeEEEEEEECCCCCEEEEEEecCcHHHHHH---HHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEeccCCCCHHHH
Confidence 899999999986 778899988665433222 2334566699999999999987 4458999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecC---CCCeEEccccccccCCCC--CccccCccc
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK---DGNPRLSSFGLMKNSRDG--KSYSTNLAF 150 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~---~~~~kl~Dfg~~~~~~~~--~~~~~t~~y 150 (423)
+.+.....+++..++.++.||+.||.|||+++ |+||||||+||+++. ++.++|+|||+++..... ....+|+.|
T Consensus 117 l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~-ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~t~~y 195 (336)
T 3fhr_A 117 IQERGDQAFTEREAAEIMRDIGTAIQFLHSHN-IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYY 195 (336)
T ss_dssp HHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCSSTTCCEEECCCTTCEEC--------------
T ss_pred HHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEEecCCCceEEEeccccceeccccccccCCCCcCc
Confidence 97655567999999999999999999999999 999999999999976 455999999999865543 345679999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhcc--ccccCCCChhHHHHHHHHHHHhcccC
Q 014484 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD--SALEGHFSNDEGTELVRLASRCLQSE 228 (423)
Q Consensus 151 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~cl~~d 228 (423)
+|||.+.+..++.++|||||||++|+|++|..||.................. ..........+++++.++|.+||+.|
T Consensus 196 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 275 (336)
T 3fhr_A 196 VAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTD 275 (336)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTTTSTTCCHHHHHHHHHHSCSS
T ss_pred cChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCchhhccCCHHHHHHHHHHCCCC
Confidence 9999998888999999999999999999999988654322211111111111 11111122356788999999999999
Q ss_pred cCCCCCHHHHHHHHHh
Q 014484 229 ARERPNAKSLVISLMS 244 (423)
Q Consensus 229 p~~Rps~~~vl~~l~~ 244 (423)
|.+|||++++++|.+-
T Consensus 276 P~~Rpt~~ell~hp~~ 291 (336)
T 3fhr_A 276 PTERLTITQFMNHPWI 291 (336)
T ss_dssp GGGSCCHHHHHHSHHH
T ss_pred hhHCcCHHHHhcCccc
Confidence 9999999999998654
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-40 Score=326.13 Aligned_cols=243 Identities=15% Similarity=0.142 Sum_probs=193.8
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHHhcCCC-CCccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNLRS-ERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
|+||.||++.+. +..+++|++..... ...+.+|++++..|+| ++|+.+..++...+..++||||+ +++|.+++..
T Consensus 18 G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~-g~sL~~ll~~ 95 (483)
T 3sv0_A 18 GSFGEIYLGTNIQTNEEVAIKLENVKTK-HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL-GPSLEDLFNF 95 (483)
T ss_dssp CSSCEEEEEEETTTCCEEEEEEEETTCS-SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHH
T ss_pred CCCEEEEEEEECCCCcEEEEEEeccccc-cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-CCCHHHHHHh
Confidence 899999999975 77788887654432 3468899999999976 56777777778888899999999 8899999964
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeee---cCCCCeEEccccccccCCCCC-----------cc
Q 014484 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILF---DKDGNPRLSSFGLMKNSRDGK-----------SY 144 (423)
Q Consensus 79 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~~-----------~~ 144 (423)
..+.+++..++.|+.||+.||.|||+++ |+||||||+|||| +.++.+||+|||+++...... ..
T Consensus 96 -~~~~l~~~~~~~i~~qi~~aL~yLH~~g-IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~ 173 (483)
T 3sv0_A 96 -CSRKLSLKTVLMLADQMINRVEFVHSKS-FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNL 173 (483)
T ss_dssp -TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCCCCC
T ss_pred -hcCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccCcceEEEecCCCCCeEEEEeCCcceeccCCcccccccccccccc
Confidence 3457999999999999999999999999 9999999999999 578899999999998654332 45
Q ss_pred ccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhcccccc---CCCChhHHHHHHHHH
Q 014484 145 STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALE---GHFSNDEGTELVRLA 221 (423)
Q Consensus 145 ~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li 221 (423)
.||+.|+|||.+.+..++.++|||||||++|||++|..||........ ...+..+...... ..+...++.++.+++
T Consensus 174 ~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li 252 (483)
T 3sv0_A 174 TGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK-KQKYEKISEKKVATSIEALCRGYPTEFASYF 252 (483)
T ss_dssp CSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSH-HHHHHHHHHHHHHSCHHHHHTTSCHHHHHHH
T ss_pred CCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhH-HHHHHHHhhccccccHHHHhcCCcHHHHHHH
Confidence 689999999999999999999999999999999999999875321100 0001111111110 011123467899999
Q ss_pred HHhcccCcCCCCCHHHHHHHHHhhhhhc
Q 014484 222 SRCLQSEARERPNAKSLVISLMSLQKEA 249 (423)
Q Consensus 222 ~~cl~~dp~~Rps~~~vl~~l~~~~~~~ 249 (423)
.+||+.||.+||++.+|++.|..+....
T Consensus 253 ~~cl~~dP~~RPs~~el~~~L~~l~~~~ 280 (483)
T 3sv0_A 253 HYCRSLRFDDKPDYSYLKRLFRDLFIRE 280 (483)
T ss_dssp HHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred HHHhcCChhhCcCHHHHHHHHHHHHHHc
Confidence 9999999999999999999998876543
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-40 Score=316.06 Aligned_cols=237 Identities=16% Similarity=0.187 Sum_probs=188.1
Q ss_pred CCCCccceeeee--cceeeeeecCCCh--hhHHHHHHHHHHHhcCCCCCccceEeEEEeCC-----ceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEAD-----ERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-----~~~lv~e~~~~~~L 72 (423)
|+||.||.+.+. +..+++|++.... .....+.+|++++..++||||+++++++.... ..++||||+.+ +|
T Consensus 38 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv~e~~~~-~L 116 (364)
T 3qyz_A 38 GAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DL 116 (364)
T ss_dssp CSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEECCSE-EH
T ss_pred CCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEEEEcccCc-CH
Confidence 899999999874 6678888876433 34577899999999999999999999997653 57999999975 99
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-------Cccc
Q 014484 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-------KSYS 145 (423)
Q Consensus 73 ~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-------~~~~ 145 (423)
.+++.. +.+++..+..++.||+.||.|||++| |+||||||+||+++.++.++|+|||+++..... ....
T Consensus 117 ~~~l~~---~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~ 192 (364)
T 3qyz_A 117 YKLLKT---QHLSNDHICYFLYQILRGLKYIHSAN-VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192 (364)
T ss_dssp HHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCC
T ss_pred HHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCChHhEEECCCCCEEEEeCcceEecCCCCCccccccccc
Confidence 999853 46999999999999999999999999 999999999999999999999999999865432 3346
Q ss_pred cCcccCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhc--------------------ccc
Q 014484 146 TNLAFTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLM--------------------DSA 204 (423)
Q Consensus 146 ~t~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~--------------------~~~ 204 (423)
||+.|+|||++.+. .++.++|||||||++|+|++|..||................. ...
T Consensus 193 gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (364)
T 3qyz_A 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLP 272 (364)
T ss_dssp SCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSC
T ss_pred cccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcC
Confidence 89999999987644 489999999999999999999998875422111111000000 000
Q ss_pred ccCC-----CChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 205 LEGH-----FSNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 205 ~~~~-----~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
.... ....+++++.+||.+||+.||.+|||++++++|..
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 316 (364)
T 3qyz_A 273 HKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 316 (364)
T ss_dssp CCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGG
T ss_pred CccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcc
Confidence 0000 11235678999999999999999999999998854
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-40 Score=314.62 Aligned_cols=236 Identities=15% Similarity=0.187 Sum_probs=186.8
Q ss_pred CCCCccceeeee--cceeeeeecCCC---hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCce------eEEEecCCCC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEADER------LLVAEFMPNE 70 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~------~lv~e~~~~~ 70 (423)
|+||.||.+.+. +..+++|++... ......+.+|+.+++.++||||+++++++...+.. ++||||+.+
T Consensus 53 G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~- 131 (371)
T 4exu_A 53 GAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQT- 131 (371)
T ss_dssp CSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCEEEEECCCE-
T ss_pred CCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEEEEEccccc-
Confidence 899999999875 778888887653 23356788999999999999999999999887765 999999974
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-CccccCcc
Q 014484 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSYSTNLA 149 (423)
Q Consensus 71 ~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~~t~~ 149 (423)
+|.+++ +..+++..+..++.|++.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....+|+.
T Consensus 132 ~l~~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~t~~ 206 (371)
T 4exu_A 132 DLQKIM----GMEFSEEKIQYLVYQMLKGLKYIHSAG-VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRW 206 (371)
T ss_dssp EHHHHT----TSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECSTTCC--------CTTCCCT
T ss_pred cHHHHh----hcCCCHHHHHHHHHHHHHHHHHHHHCC-CcCCCcCHHHeEECCCCCEEEEecCcccccccCcCCcccCcc
Confidence 898887 345999999999999999999999999 999999999999999999999999999866544 34578999
Q ss_pred cCCcccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhh----------------------hhcccccc
Q 014484 150 FTPPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFL----------------------LLMDSALE 206 (423)
Q Consensus 150 y~aPE~~~~-~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~ 206 (423)
|+|||.+.+ ..++.++|||||||++|+|++|..||.............. ........
T Consensus 207 y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (371)
T 4exu_A 207 YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPR 286 (371)
T ss_dssp TSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCC
T ss_pred ccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcc
Confidence 999999887 6789999999999999999999999876432211111000 00000000
Q ss_pred CC---CChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 207 GH---FSNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 207 ~~---~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
.. ....+++++.+||.+||+.||.+|||++++++|..
T Consensus 287 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 326 (371)
T 4exu_A 287 KDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPF 326 (371)
T ss_dssp CCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGG
T ss_pred hhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcc
Confidence 00 11234678999999999999999999999998854
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-40 Score=318.57 Aligned_cols=237 Identities=16% Similarity=0.177 Sum_probs=185.5
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeC----------------------
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEA---------------------- 57 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~---------------------- 57 (423)
|+||.||.+.+. +..+++|.+..... ...+|+++++.++||||+++++++...
T Consensus 18 G~fg~V~~a~~~~~~~~vAiK~~~~~~~---~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (383)
T 3eb0_A 18 GSFGIVCEVFDIESGKRFALKKVLQDPR---YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNN 94 (383)
T ss_dssp C-CEEEEEEEETTTCCEEEEEEEECCTT---SCCHHHHHHTTCCCTTBCCEEEEEEEC----------------------
T ss_pred ccCEEEEEEEECCCCCEEEEEEEecCcc---hHHHHHHHHHHcCCCCccchhheeeecCccccccccccccccccccccc
Confidence 999999999874 67888887755432 234799999999999999999999543
Q ss_pred ----------------CceeEEEecCCCCCHHhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCe
Q 014484 58 ----------------DERLLVAEFMPNETLAKHLFH--WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRI 119 (423)
Q Consensus 58 ----------------~~~~lv~e~~~~~~L~~~i~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Ni 119 (423)
...++||||+++ +|.+.+.. ..+..+++..+..++.||+.||.|||++| |+||||||+||
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g-i~H~Dikp~Ni 172 (383)
T 3eb0_A 95 GVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLG-ICHRDIKPQNL 172 (383)
T ss_dssp ---------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT-EECSCCCGGGE
T ss_pred ccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCc-CccCccCHHHE
Confidence 237899999985 87777652 24567999999999999999999999999 99999999999
Q ss_pred eec-CCCCeEEccccccccCCCC---CccccCcccCCccccccCC-CCCCcceehhHHHHHHHhhCCCCCCchhhHHhhh
Q 014484 120 LFD-KDGNPRLSSFGLMKNSRDG---KSYSTNLAFTPPEYMRTGR-VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRS 194 (423)
Q Consensus 120 ll~-~~~~~kl~Dfg~~~~~~~~---~~~~~t~~y~aPE~~~~~~-~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~ 194 (423)
+++ .++.+||+|||+++..... ....+|+.|+|||.+.+.. ++.++||||+||++|+|++|..||..........
T Consensus 173 l~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~ 252 (383)
T 3eb0_A 173 LVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLV 252 (383)
T ss_dssp EEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred EEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHH
Confidence 997 6889999999999865433 3456799999999987654 8999999999999999999999987643221111
Q ss_pred chhhhhc-----------------------cccccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 195 KNFLLLM-----------------------DSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 195 ~~~~~~~-----------------------~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
....... .......++...++++.+||.+||+.||.+|||+.++++|-.
T Consensus 253 ~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 324 (383)
T 3eb0_A 253 RIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPF 324 (383)
T ss_dssp HHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGG
T ss_pred HHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCHH
Confidence 1110000 000011133446788999999999999999999999998754
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-40 Score=315.77 Aligned_cols=241 Identities=15% Similarity=0.205 Sum_probs=194.6
Q ss_pred CCCCccceeee--ecceeeeeecCCChhhHHHHHHHHHHHhcCC-----------CCCccceEeEEEeCC----ceeEEE
Q 014484 2 GGRCSKFSICW--FHCHLKSSVLESSDLGETLNLEEAKAVGNLR-----------SERLANLIGCCYEAD----ERLLVA 64 (423)
Q Consensus 2 G~~g~v~~~~~--~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~~~~~~~~~~----~~~lv~ 64 (423)
|+||.||.+.+ .+..+++|++.........+.+|++++..++ ||||+++++++...+ ..++||
T Consensus 30 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~lv~ 109 (373)
T 1q8y_A 30 GHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVF 109 (373)
T ss_dssp CSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEEEEEEEE
T ss_pred cCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCCceEEEEE
Confidence 89999999987 3778999998877777788899999999986 899999999998754 688999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcC-CCeeeccCCCCCeeec------CCCCeEEcccccccc
Q 014484 65 EFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSK-GRALYHDLNAYRILFD------KDGNPRLSSFGLMKN 137 (423)
Q Consensus 65 e~~~~~~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~~iiH~dlkp~Nill~------~~~~~kl~Dfg~~~~ 137 (423)
|++ +++|.+++.......+++..+..++.||+.||.|||++ + |+||||||+|||++ ..+.+||+|||+++.
T Consensus 110 e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~-ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~ 187 (373)
T 1q8y_A 110 EVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG-IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACW 187 (373)
T ss_dssp CCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC-EECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEE
T ss_pred ecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCC-EEecCCChHHeEEeccCCCcCcceEEEcccccccc
Confidence 999 88999999765566799999999999999999999998 9 99999999999994 344799999999986
Q ss_pred CCCC-CccccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhh-----hchhhhhcc---------
Q 014484 138 SRDG-KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIR-----SKNFLLLMD--------- 202 (423)
Q Consensus 138 ~~~~-~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~-----~~~~~~~~~--------- 202 (423)
.... ....+|+.|+|||++.+..++.++|||||||++|+|++|..||......... ...+.....
T Consensus 188 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 267 (373)
T 1q8y_A 188 YDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRN 267 (373)
T ss_dssp TTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHH
T ss_pred cCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhc
Confidence 6543 4457899999999999989999999999999999999999988753211000 000000000
Q ss_pred ----------------------------ccccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHh
Q 014484 203 ----------------------------SALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMS 244 (423)
Q Consensus 203 ----------------------------~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~ 244 (423)
......++...+.++.+||.+||+.||.+|||++++++|..-
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f 337 (373)
T 1q8y_A 268 GKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWL 337 (373)
T ss_dssp CTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGG
T ss_pred cchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhChhh
Confidence 001113456778999999999999999999999999988543
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-40 Score=320.31 Aligned_cols=238 Identities=20% Similarity=0.183 Sum_probs=184.6
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCC------ceeEEEecCCCCCHH
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEAD------ERLLVAEFMPNETLA 73 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------~~~lv~e~~~~~~L~ 73 (423)
|+||.||++.+. +..+++|.+.... ..+.+|+++++.++||||++++++|.... .+++||||+++ +|.
T Consensus 65 G~fg~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~~-~l~ 140 (420)
T 1j1b_A 65 GSFGVVYQAKLCDSGELVAIKKVLQDK---RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVY 140 (420)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEEECCT---TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEECCCE-EHH
T ss_pred CCCEEEEEEEECCCCcEEEEEEecccc---hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehhcccc-cHH
Confidence 899999999984 6778888775543 23457999999999999999999986532 26799999986 676
Q ss_pred hhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCC-CCeEEccccccccCCCC---CccccC
Q 014484 74 KHLFH--WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKD-GNPRLSSFGLMKNSRDG---KSYSTN 147 (423)
Q Consensus 74 ~~i~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~-~~~kl~Dfg~~~~~~~~---~~~~~t 147 (423)
+.+.. .....+++..+..++.||+.||.|||+++ |+||||||+|||++.+ +.+||+|||+++..... ....+|
T Consensus 141 ~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~~~~~~~~~t 219 (420)
T 1j1b_A 141 RVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 219 (420)
T ss_dssp HHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT-EECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSCCSC
T ss_pred HHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChhhEEEeCCCCeEEeccchhhhhcccCCCceeeeeC
Confidence 66542 23567999999999999999999999999 9999999999999965 56899999999865433 345789
Q ss_pred cccCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhh-----------hhcccccc---------
Q 014484 148 LAFTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFL-----------LLMDSALE--------- 206 (423)
Q Consensus 148 ~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~-----------~~~~~~~~--------- 206 (423)
+.|+|||++.+. .++.++|||||||++|||++|..||.+..........+. ........
T Consensus 220 ~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~ 299 (420)
T 1j1b_A 220 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAH 299 (420)
T ss_dssp TTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCC
T ss_pred CCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCC
Confidence 999999998765 689999999999999999999999876432111111100 00000000
Q ss_pred ---CCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHh
Q 014484 207 ---GHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMS 244 (423)
Q Consensus 207 ---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~ 244 (423)
..++...++++.+||.+||+.||.+|||+.++++|..-
T Consensus 300 ~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f 340 (420)
T 1j1b_A 300 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 340 (420)
T ss_dssp CHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGG
T ss_pred CHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhh
Confidence 00233457889999999999999999999999988543
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-39 Score=308.58 Aligned_cols=236 Identities=15% Similarity=0.177 Sum_probs=187.1
Q ss_pred CCCCccceeeee--cceeeeeecCCCh---hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCc------eeEEEecCCCC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADE------RLLVAEFMPNE 70 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~------~~lv~e~~~~~ 70 (423)
|+||.||.+.+. +..+++|++.... .....+.+|+.+++.++||||+++++++..... .++||||+.+
T Consensus 35 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~- 113 (353)
T 3coi_A 35 GAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQT- 113 (353)
T ss_dssp CSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEECCSE-
T ss_pred CCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEEEEeccccC-
Confidence 899999999874 7788888875533 335678899999999999999999999987764 4999999974
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-CccccCcc
Q 014484 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSYSTNLA 149 (423)
Q Consensus 71 ~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~~t~~ 149 (423)
+|.+++. ..+++..+..++.||+.||.|||++| |+||||||+||+++.++.+||+|||+++..... ....+|+.
T Consensus 114 ~l~~~~~----~~~~~~~~~~i~~qi~~al~~LH~~~-ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~t~~ 188 (353)
T 3coi_A 114 DLQKIMG----LKFSEEKIQYLVYQMLKGLKYIHSAG-VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRW 188 (353)
T ss_dssp EGGGTTT----SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCCGGGEEECTTCCEEECSTTCTTC--------CCSBC
T ss_pred CHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEeECCCCcEEEeecccccCCCCCccccccCcC
Confidence 9988873 35999999999999999999999999 999999999999999999999999999865543 33568999
Q ss_pred cCCcccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchh----------------------hhhcccccc
Q 014484 150 FTPPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNF----------------------LLLMDSALE 206 (423)
Q Consensus 150 y~aPE~~~~-~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~ 206 (423)
|+|||.+.+ ..++.++|||||||++|+|++|..||............. .........
T Consensus 189 y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (353)
T 3coi_A 189 YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPR 268 (353)
T ss_dssp CSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSS
T ss_pred cCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCC
Confidence 999999886 678999999999999999999999887543211110000 000011111
Q ss_pred ---CCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 207 ---GHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 207 ---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
......+++++.++|.+||+.||.+|||++++++|..
T Consensus 269 ~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~ 308 (353)
T 3coi_A 269 KDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPF 308 (353)
T ss_dssp CCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGG
T ss_pred ccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcc
Confidence 1223456789999999999999999999999998754
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-40 Score=317.95 Aligned_cols=241 Identities=12% Similarity=0.168 Sum_probs=176.6
Q ss_pred CCCCccceeeee----cceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEe--CCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF----HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYE--ADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~----~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||++.+. +..+++|++..... ...+.+|+.+|+.++||||+++++++.. +...++||||+.+ +|.++
T Consensus 32 G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~ 109 (405)
T 3rgf_A 32 GTYGHVYKAKRKDGKDDKDYALKQIEGTGI-SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHI 109 (405)
T ss_dssp ----EEEEEEESSSSCCCCEEEEECSSSSC-CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCSE-EHHHH
T ss_pred cCCeEEEEEEEccCCCCeEEEEEEECCCCC-CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCCC-CHHHH
Confidence 899999999964 56788888865543 3568899999999999999999999965 5678999999975 88887
Q ss_pred hccC-------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeee----cCCCCeEEccccccccCCCC---
Q 014484 76 LFHW-------ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILF----DKDGNPRLSSFGLMKNSRDG--- 141 (423)
Q Consensus 76 i~~~-------~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill----~~~~~~kl~Dfg~~~~~~~~--- 141 (423)
+... ....+++..++.++.||+.||.|||+++ |+||||||+|||+ +.++.+||+|||+++.....
T Consensus 110 ~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~ 188 (405)
T 3rgf_A 110 IKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW-VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP 188 (405)
T ss_dssp HHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECCSSTTTTCEEECCTTCCC--------
T ss_pred HHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC-EeCCCcCHHHeEEecCCCCCCcEEEEECCCceecCCCCcc
Confidence 7521 1235999999999999999999999999 9999999999999 67789999999999865432
Q ss_pred ----CccccCcccCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhh-----c---hhhhhccc-----
Q 014484 142 ----KSYSTNLAFTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRS-----K---NFLLLMDS----- 203 (423)
Q Consensus 142 ----~~~~~t~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~-----~---~~~~~~~~----- 203 (423)
....||+.|+|||++.+. .++.++|||||||++|+|++|..||.......... . .+...+..
T Consensus 189 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~ 268 (405)
T 3rgf_A 189 LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKD 268 (405)
T ss_dssp --------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTT
T ss_pred cccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhh
Confidence 335689999999999874 48999999999999999999999886432110000 0 00000000
Q ss_pred -------------------cccCC---------CChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhh
Q 014484 204 -------------------ALEGH---------FSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 245 (423)
Q Consensus 204 -------------------~~~~~---------~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~ 245 (423)
..... .....++++.+||.+||+.||.+|||++++++|-+-.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~ 338 (405)
T 3rgf_A 269 WEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFL 338 (405)
T ss_dssp CGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGT
T ss_pred cchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhc
Confidence 00000 0001156789999999999999999999999986543
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-39 Score=307.73 Aligned_cols=239 Identities=14% Similarity=0.128 Sum_probs=194.0
Q ss_pred CCCCccceeeee--c-ceeeeeecCCChhhHHHHHHHHHHHhcCCCCC------ccceEeEEEeCCceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICWF--H-CHLKSSVLESSDLGETLNLEEAKAVGNLRSER------LANLIGCCYEADERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~~--~-~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~~~~~~~~~~~~~lv~e~~~~~~L 72 (423)
|+||.||.+.+. + ..+++|++.........+.+|+.+++.++|++ ++.+++++...+..++||||+ +++|
T Consensus 30 G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l 108 (355)
T 2eu9_A 30 GTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELL-GKNT 108 (355)
T ss_dssp ETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred cCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEEEEEecc-CCCh
Confidence 899999999874 3 57899998877777788899999999997665 899999999999999999999 5577
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeee-------------------cCCCCeEEcccc
Q 014484 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILF-------------------DKDGNPRLSSFG 133 (423)
Q Consensus 73 ~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill-------------------~~~~~~kl~Dfg 133 (423)
.+++.......+++..++.++.||+.||.|||+++ |+||||||+|||+ +.++.+||+|||
T Consensus 109 ~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~-ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg 187 (355)
T 2eu9_A 109 FEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQ-LTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFG 187 (355)
T ss_dssp HHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCT
T ss_pred HHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecC
Confidence 77776655567999999999999999999999999 9999999999999 567899999999
Q ss_pred ccccCCCC-CccccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccc---------
Q 014484 134 LMKNSRDG-KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS--------- 203 (423)
Q Consensus 134 ~~~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~--------- 203 (423)
+++..... ....||+.|+|||++.+..++.++|||||||++|+|++|..||.......... ........
T Consensus 188 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~-~~~~~~~~~p~~~~~~~ 266 (355)
T 2eu9_A 188 SATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLV-MMEKILGPIPSHMIHRT 266 (355)
T ss_dssp TCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH-HHHHHHCCCCHHHHHHC
T ss_pred ccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHHHcCCCcHHHhhhc
Confidence 99865543 44678999999999998899999999999999999999999987542221100 00000000
Q ss_pred ------------------------------cccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 204 ------------------------------ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 204 ------------------------------~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
..........+.++.+||.+||+.||.+|||+.++++|-.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~ 336 (355)
T 2eu9_A 267 RKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPF 336 (355)
T ss_dssp SCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGG
T ss_pred cchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcChh
Confidence 0000112345678999999999999999999999998744
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-39 Score=310.58 Aligned_cols=240 Identities=13% Similarity=0.100 Sum_probs=192.3
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHHhcCC-CC-----CccceEeEEEeCCceeEEEecCCCCCHH
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNLR-SE-----RLANLIGCCYEADERLLVAEFMPNETLA 73 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~~~~~~~~~~~~~lv~e~~~~~~L~ 73 (423)
|+||.||++.+. +..+++|++.........+..|+.++..++ |+ +|+++++++...+..++||||+.+ +|.
T Consensus 65 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~-~L~ 143 (382)
T 2vx3_A 65 GSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSY-NLY 143 (382)
T ss_dssp ETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEEEEECCCC-BHH
T ss_pred cCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEEEEecCCC-CHH
Confidence 899999999875 677999998877766778888999998884 55 499999999999999999999965 999
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHHHc--CCCeeeccCCCCCeeec--CCCCeEEccccccccCCCC-CccccCc
Q 014484 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSS--KGRALYHDLNAYRILFD--KDGNPRLSSFGLMKNSRDG-KSYSTNL 148 (423)
Q Consensus 74 ~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~--~~~iiH~dlkp~Nill~--~~~~~kl~Dfg~~~~~~~~-~~~~~t~ 148 (423)
+++.....+.+++..+..++.|++.||.|||+ .+ |+||||||+|||++ .++.+||+|||+++..... ....+|+
T Consensus 144 ~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~-ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~~~~~~~~t~ 222 (382)
T 2vx3_A 144 DLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELS-IIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSR 222 (382)
T ss_dssp HHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTC-EECCCCSGGGEEESSTTSCCEEECCCTTCEETTCCCCSSCSCG
T ss_pred HHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCC-EEcCCCCcccEEEecCCCCcEEEEeccCceecccccccccCCc
Confidence 99976555679999999999999999999994 67 99999999999994 4778999999999876544 4567899
Q ss_pred ccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhh-----------------hcccccc-----
Q 014484 149 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLL-----------------LMDSALE----- 206 (423)
Q Consensus 149 ~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~----- 206 (423)
.|+|||++.+..++.++|||||||++|||++|..||............... .......
T Consensus 223 ~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (382)
T 2vx3_A 223 FYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNL 302 (382)
T ss_dssp GGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTCTTHHHHEEECTTSCEEE
T ss_pred cccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhHHHHHHHHhcccccccc
Confidence 999999999989999999999999999999999998754222111100000 0000000
Q ss_pred ------------------------------------CCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 207 ------------------------------------GHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 207 ------------------------------------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
........+++.+||.+||+.||++|||++++++|..
T Consensus 303 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e~L~hp~ 375 (382)
T 2vx3_A 303 KKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSF 375 (382)
T ss_dssp CCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHHHTTSGG
T ss_pred ccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhhCCCHHHHhcCcc
Confidence 0001123457999999999999999999999998743
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-39 Score=310.17 Aligned_cols=241 Identities=16% Similarity=0.140 Sum_probs=184.7
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCc-------eeEEEecCCCCCH
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADE-------RLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-------~~lv~e~~~~~~L 72 (423)
|+||.||.+.+. +..+++|++.........+.+|++.+..++||||+++++++...+. .++||||+.+ +|
T Consensus 34 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l 112 (360)
T 3e3p_A 34 GTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TL 112 (360)
T ss_dssp -----CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEEEEECCSC-BH
T ss_pred CCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEEEeecccc-cH
Confidence 899999999985 6788888876666556677888999999999999999999976544 7899999987 55
Q ss_pred Hhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHH--cCCCeeeccCCCCCeeecC-CCCeEEccccccccCCCC---Ccc
Q 014484 73 AKHLFH--WETQPMKWAMRLRVALYLAQALEYCS--SKGRALYHDLNAYRILFDK-DGNPRLSSFGLMKNSRDG---KSY 144 (423)
Q Consensus 73 ~~~i~~--~~~~~~~~~~~~~i~~qi~~~l~~lH--~~~~iiH~dlkp~Nill~~-~~~~kl~Dfg~~~~~~~~---~~~ 144 (423)
...+.. .....+++..+..++.|++.||.||| +++ |+||||||+|||++. ++.+||+|||+++..... ...
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~-ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~~~~~~~~ 191 (360)
T 3e3p_A 113 HRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVN-VCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAY 191 (360)
T ss_dssp HHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTC-CBCSCCCGGGEEEETTTTEEEECCCTTCBCCCTTSCCCST
T ss_pred HHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCC-eecCcCCHHHEEEeCCCCcEEEeeCCCceecCCCCCcccc
Confidence 544431 24567899999999999999999999 999 999999999999996 889999999999876543 345
Q ss_pred ccCcccCCccccccCC-CCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhh----------cc-----------
Q 014484 145 STNLAFTPPEYMRTGR-VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLL----------MD----------- 202 (423)
Q Consensus 145 ~~t~~y~aPE~~~~~~-~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~----------~~----------- 202 (423)
.||+.|+|||++.+.. ++.++|||||||++|+|++|..||................ ..
T Consensus 192 ~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (360)
T 3e3p_A 192 ICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNS 271 (360)
T ss_dssp TSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCC
T ss_pred cCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhcccccc
Confidence 6899999999987654 8999999999999999999999987643221111111000 00
Q ss_pred -----ccccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHh
Q 014484 203 -----SALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMS 244 (423)
Q Consensus 203 -----~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~ 244 (423)
.......+...++++.+||.+||+.||.+|||+.++++|.+-
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f 318 (360)
T 3e3p_A 272 KGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYF 318 (360)
T ss_dssp CCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGG
T ss_pred ccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccc
Confidence 000111222357899999999999999999999999988543
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-40 Score=318.40 Aligned_cols=237 Identities=18% Similarity=0.202 Sum_probs=181.5
Q ss_pred CCCCccceeeee-cceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCc------eeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF-HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADE------RLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~------~~lv~e~~~~~~L~~ 74 (423)
|+||.||.+.+. +..+++|.+..... ...+|+++++.++||||+++++++...+. .++||||++++ +.+
T Consensus 51 G~~g~V~~a~~~~~~~~aikk~~~~~~---~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~~~~-l~~ 126 (394)
T 4e7w_A 51 GSFGVVFQAKLVESDEVAIKKVLQDKR---FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPET-VYR 126 (394)
T ss_dssp ETTEEEEEEEETTTEEEEEEEEECCTT---SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEECCSEE-HHH
T ss_pred CCCeEEEEEEECCCCeEEEEEEecCcc---hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeeccCcc-HHH
Confidence 899999999884 34466665543332 23479999999999999999999976543 78999999874 443
Q ss_pred hhc--cCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeec-CCCCeEEccccccccCCCC---CccccCc
Q 014484 75 HLF--HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFD-KDGNPRLSSFGLMKNSRDG---KSYSTNL 148 (423)
Q Consensus 75 ~i~--~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~-~~~~~kl~Dfg~~~~~~~~---~~~~~t~ 148 (423)
.+. ......+++..+..++.||+.||.|||+++ |+||||||+|||++ .++.+||+|||+++..... ....+|+
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~~~~~~~~t~ 205 (394)
T 4e7w_A 127 ASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG-ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSYICSR 205 (394)
T ss_dssp HHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSSCSCG
T ss_pred HHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCCCCcccccCc
Confidence 332 113567999999999999999999999999 99999999999998 7899999999999865433 3457899
Q ss_pred ccCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhh-----------hcc----c--------c
Q 014484 149 AFTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLL-----------LMD----S--------A 204 (423)
Q Consensus 149 ~y~aPE~~~~~-~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~-----------~~~----~--------~ 204 (423)
.|+|||.+.+. .++.++|||||||++|+|++|..||.+............. ... . .
T Consensus 206 ~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~ 285 (394)
T 4e7w_A 206 YYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHP 285 (394)
T ss_dssp GGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCC
T ss_pred CccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCc
Confidence 99999998765 4899999999999999999999998765322111111000 000 0 0
Q ss_pred ccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 205 LEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 205 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
....++...++++.+||.+||+.||.+|||+.++++|-.
T Consensus 286 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 324 (394)
T 4e7w_A 286 FSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPF 324 (394)
T ss_dssp HHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGG
T ss_pred HHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChh
Confidence 000122345778999999999999999999999998843
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-39 Score=309.86 Aligned_cols=237 Identities=16% Similarity=0.158 Sum_probs=188.0
Q ss_pred CCCCccceeeee--cceeeeeecCCC--hhhHHHHHHHHHHHhcCCCCCccceEeEEEeC-----CceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEA-----DERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~~~lv~e~~~~~~L 72 (423)
|+||.||.+.+. +..+++|++... ......+.+|++++..++||||+++++++... ...++||||+.+ +|
T Consensus 22 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~-~L 100 (353)
T 2b9h_A 22 GAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQT-DL 100 (353)
T ss_dssp CSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEEECCCSE-EH
T ss_pred CCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEEEeccCc-cH
Confidence 899999999985 777888887543 23456788999999999999999999998765 568999999975 99
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-----------
Q 014484 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----------- 141 (423)
Q Consensus 73 ~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----------- 141 (423)
.+++.. +.+++..+..++.|++.||.|||+++ |+||||||+||+++.++.++|+|||+++.....
T Consensus 101 ~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~-ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~ 176 (353)
T 2b9h_A 101 HRVIST---QMLSDDHIQYFIYQTLRAVKVLHGSN-VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176 (353)
T ss_dssp HHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCCTTCEECC-------------
T ss_pred HHHHhh---cCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEEcCCCcEEEEecccccccccccccccCccccc
Confidence 999853 46999999999999999999999999 999999999999999999999999999865422
Q ss_pred ---CccccCcccCCcccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhh-------------------
Q 014484 142 ---KSYSTNLAFTPPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFL------------------- 198 (423)
Q Consensus 142 ---~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~------------------- 198 (423)
....||+.|+|||++.+ ..++.++|||||||++|+|++|..||..............
T Consensus 177 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (353)
T 2b9h_A 177 SGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRA 256 (353)
T ss_dssp ---CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHH
T ss_pred cchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhccccccccchh
Confidence 12457899999998764 6689999999999999999999999876432111100000
Q ss_pred -hhcccccc-C-----CCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 199 -LLMDSALE-G-----HFSNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 199 -~~~~~~~~-~-----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
........ . .....+++++.++|.+||+.||.+|||++++++|..
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 308 (353)
T 2b9h_A 257 REYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPY 308 (353)
T ss_dssp HHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred hHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCcc
Confidence 00000000 0 011245778999999999999999999999998754
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=306.71 Aligned_cols=240 Identities=16% Similarity=0.154 Sum_probs=189.6
Q ss_pred CCCCccceeeee---cceeeeeecCCCh---hhHHHHHHHHHHHhcC---CCCCccceEeEEE-----eCCceeEEEecC
Q 014484 2 GGRCSKFSICWF---HCHLKSSVLESSD---LGETLNLEEAKAVGNL---RSERLANLIGCCY-----EADERLLVAEFM 67 (423)
Q Consensus 2 G~~g~v~~~~~~---~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l---~h~niv~~~~~~~-----~~~~~~lv~e~~ 67 (423)
|+||.||.+.+. +..+++|++.... .....+.+|+.+++.+ +||||+++++++. .....++||||+
T Consensus 22 G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~ 101 (326)
T 1blx_A 22 GAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV 101 (326)
T ss_dssp ETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEEEEECC
T ss_pred cccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCceEEEEEecC
Confidence 899999999873 5667777764322 1233567788877776 8999999999997 455689999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC---Ccc
Q 014484 68 PNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSY 144 (423)
Q Consensus 68 ~~~~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~ 144 (423)
.| +|.+++.......+++..++.++.|++.||.|||++| |+||||||+||+++.++.++|+|||+++..... ...
T Consensus 102 ~~-~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~g-i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~ 179 (326)
T 1blx_A 102 DQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR-VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSV 179 (326)
T ss_dssp SC-BHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECSCCSCCCCCGGGGGCCC
T ss_pred CC-CHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCCHHHeEEcCCCCEEEecCcccccccCCCCcccc
Confidence 84 9999997655567999999999999999999999999 999999999999999999999999998765532 345
Q ss_pred ccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhc---------------------cc
Q 014484 145 STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLM---------------------DS 203 (423)
Q Consensus 145 ~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~---------------------~~ 203 (423)
.+|+.|+|||.+.+..++.++|||||||++|+|++|..||................. ..
T Consensus 180 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (326)
T 1blx_A 180 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSA 259 (326)
T ss_dssp CCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCC
T ss_pred ccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccccchhhhcccCc
Confidence 679999999999988999999999999999999999998876432211111110000 00
Q ss_pred cccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 204 ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 204 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
.....+...++..+.++|.+||+.||.+|||+.++++|-.
T Consensus 260 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~ 299 (326)
T 1blx_A 260 QPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY 299 (326)
T ss_dssp CCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGG
T ss_pred chhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCcc
Confidence 0011123446788999999999999999999999998744
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-39 Score=299.34 Aligned_cols=234 Identities=15% Similarity=0.130 Sum_probs=190.7
Q ss_pred CCCCccceeeee--cceeeeeecCCCh---hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
|+||.||.+.+. +..+++|++.... .....+.+|++++++++||||+++++++...+..++||||+++++|.+++
T Consensus 33 G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l 112 (287)
T 2wei_A 33 GSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEI 112 (287)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHH
T ss_pred CCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEEccCCCCHHHHH
Confidence 899999999884 6778888764432 34668899999999999999999999999999999999999999999988
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCC---CCeEEccccccccCCCCC---ccccCccc
Q 014484 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKD---GNPRLSSFGLMKNSRDGK---SYSTNLAF 150 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~---~~~kl~Dfg~~~~~~~~~---~~~~t~~y 150 (423)
.. ...+++..++.++.|++.||.|||+++ ++||||||+||+++.+ +.++|+|||++....... ...+|+.|
T Consensus 113 ~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y 189 (287)
T 2wei_A 113 IK--RKRFSEHDAARIIKQVFSGITYMHKHN-IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYY 189 (287)
T ss_dssp HH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCSSCSCHHHHHTT
T ss_pred Hh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCChhhEEEecCCCcccEEEeccCcceeecCCCccccccCcccc
Confidence 64 346999999999999999999999999 9999999999999754 469999999988665432 33578899
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCC--hhHHHHHHHHHHHhcccC
Q 014484 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFS--NDEGTELVRLASRCLQSE 228 (423)
Q Consensus 151 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~cl~~d 228 (423)
+|||.+.+ .++.++||||||+++|+|++|..||......... ............+ ..+++++.++|.+||+.|
T Consensus 190 ~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d 264 (287)
T 2wei_A 190 IAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDIL----KRVETGKYAFDLPQWRTISDDAKDLIRKMLTFH 264 (287)
T ss_dssp CCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHHCCCCCCSGGGTTSCHHHHHHHHHHTCSS
T ss_pred cChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHH----HHHHcCCCCCCchhhhhcCHHHHHHHHHHcccC
Confidence 99999875 5899999999999999999999988764322111 1111111111111 345788999999999999
Q ss_pred cCCCCCHHHHHHHHH
Q 014484 229 ARERPNAKSLVISLM 243 (423)
Q Consensus 229 p~~Rps~~~vl~~l~ 243 (423)
|.+|||+.+++++..
T Consensus 265 p~~Rps~~ell~hp~ 279 (287)
T 2wei_A 265 PSLRITATQCLEHPW 279 (287)
T ss_dssp GGGSCCHHHHHHSHH
T ss_pred hhhCcCHHHHhcCHH
Confidence 999999999998754
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-40 Score=313.08 Aligned_cols=239 Identities=13% Similarity=0.122 Sum_probs=181.2
Q ss_pred CCCCccceeeee-cceeeeeecCCCh------------hhHHHHHHHHHHHhcCCCCCccceEeEEEeCC-----ceeEE
Q 014484 2 GGRCSKFSICWF-HCHLKSSVLESSD------------LGETLNLEEAKAVGNLRSERLANLIGCCYEAD-----ERLLV 63 (423)
Q Consensus 2 G~~g~v~~~~~~-~~~~~~~~~~~~~------------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-----~~~lv 63 (423)
|+||.||.+... +..+++|++.... .....+.+|++++..++||||+++++++...+ ..++|
T Consensus 33 G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv 112 (362)
T 3pg1_A 33 GSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLV 112 (362)
T ss_dssp ETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECCTTTCCEEEEE
T ss_pred CCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEeccCCCcceEEEE
Confidence 899999999764 6778888764321 12367899999999999999999999996533 47999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC--
Q 014484 64 AEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-- 141 (423)
Q Consensus 64 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-- 141 (423)
|||+.| +|.+++.. ....+++..+..++.||+.||.|||+++ |+||||||+||+++.++.++|+|||+++.....
T Consensus 113 ~e~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 189 (362)
T 3pg1_A 113 TELMRT-DLAQVIHD-QRIVISPQHIQYFMYHILLGLHVLHEAG-VVHRDLHPGNILLADNNDITICDFNLAREDTADAN 189 (362)
T ss_dssp EECCSE-EHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCTTC---------
T ss_pred EccCCC-CHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCc-CEecCCChHHEEEcCCCCEEEEecCcccccccccc
Confidence 999985 88888864 4457999999999999999999999999 999999999999999999999999999754432
Q ss_pred -CccccCcccCCcccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhh-------------------hh
Q 014484 142 -KSYSTNLAFTPPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFL-------------------LL 200 (423)
Q Consensus 142 -~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~-------------------~~ 200 (423)
....+|+.|+|||.+.+ ..++.++|||||||++|+|++|..||.............. ..
T Consensus 190 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 269 (362)
T 3pg1_A 190 KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDY 269 (362)
T ss_dssp ------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHH
T ss_pred cceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHH
Confidence 33568899999999876 6689999999999999999999999876432211111100 00
Q ss_pred ccccccC-------CCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 201 MDSALEG-------HFSNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 201 ~~~~~~~-------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
....... ......++.+.++|.+||+.||.+|||+.++++|..
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 319 (362)
T 3pg1_A 270 LRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPY 319 (362)
T ss_dssp TTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGG
T ss_pred HHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCch
Confidence 0000000 012234678999999999999999999999998744
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-39 Score=303.57 Aligned_cols=238 Identities=16% Similarity=0.177 Sum_probs=182.6
Q ss_pred CCCCccceeeee--cceeeeeecCCCh-hhHHHHHHHHHHHhcCCCCCccceEeEEE--------------eCCceeEEE
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCY--------------EADERLLVA 64 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~--------------~~~~~~lv~ 64 (423)
|+||.||.+.+. +..+++|++.... .....+.+|+++++.++||||+++++++. .....++||
T Consensus 22 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~ 101 (320)
T 2i6l_A 22 GGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQ 101 (320)
T ss_dssp ----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CCSCSEEEEEE
T ss_pred CCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccccccCceeEEe
Confidence 899999999985 6778888765443 44678899999999999999999999874 345689999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeec-CCCCeEEccccccccCCCC--
Q 014484 65 EFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFD-KDGNPRLSSFGLMKNSRDG-- 141 (423)
Q Consensus 65 e~~~~~~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~-~~~~~kl~Dfg~~~~~~~~-- 141 (423)
||+.| +|.+++. .+.+++..++.++.|++.||.|||+++ |+||||||+||+++ .++.+||+|||+++.....
T Consensus 102 e~~~~-~L~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~ 176 (320)
T 2i6l_A 102 EYMET-DLANVLE---QGPLLEEHARLFMYQLLRGLKYIHSAN-VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYS 176 (320)
T ss_dssp ECCSE-EHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEEETTTTEEEECCCTTCBCC-----
T ss_pred eccCC-CHHHHhh---cCCccHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEcCCCCeEEEccCccccccCCCcc
Confidence 99974 9999994 457999999999999999999999999 99999999999997 5678999999999865432
Q ss_pred -----CccccCcccCCcccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhh---------------
Q 014484 142 -----KSYSTNLAFTPPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLL--------------- 200 (423)
Q Consensus 142 -----~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~--------------- 200 (423)
....+|..|+|||.+.+ ..++.++|||||||++|+|++|..||................
T Consensus 177 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (320)
T 2i6l_A 177 HKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVI 256 (320)
T ss_dssp ---CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTS
T ss_pred cccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcC
Confidence 23356889999998865 668999999999999999999999887643211111000000
Q ss_pred ---cccccc-C-----CCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHh
Q 014484 201 ---MDSALE-G-----HFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMS 244 (423)
Q Consensus 201 ---~~~~~~-~-----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~ 244 (423)
...... . .....++.++.++|.+||+.||.+|||++++++|..-
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 309 (320)
T 2i6l_A 257 PVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYM 309 (320)
T ss_dssp CHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHH
T ss_pred cccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCccc
Confidence 000000 0 0112357789999999999999999999999988543
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-39 Score=302.00 Aligned_cols=235 Identities=18% Similarity=0.237 Sum_probs=188.6
Q ss_pred CCCCccceeeee-cceeeeeecCCC---hhhHHHHHHHHHHHhcCC--CCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF-HCHLKSSVLESS---DLGETLNLEEAKAVGNLR--SERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~-~~~~~~~~~~~~---~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.+. +..+++|++... ......+.+|++++..++ ||||+++++++..++..++||| +.+++|.++
T Consensus 39 G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~~~L~~~ 117 (313)
T 3cek_A 39 GGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSW 117 (313)
T ss_dssp CSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEEC-CCSEEHHHH
T ss_pred CCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEe-cCCCcHHHH
Confidence 899999999874 566788877433 344678899999999997 5999999999999999999999 557899999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC------CccccCcc
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------KSYSTNLA 149 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~------~~~~~t~~ 149 (423)
+.. .+.+++..++.++.|++.||.|||+++ ++||||||+||++++ +.+||+|||+++..... ....||+.
T Consensus 118 l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~ 193 (313)
T 3cek_A 118 LKK--KKSIDPWERKSYWKNMLEAVHTIHQHG-IVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVN 193 (313)
T ss_dssp HHH--CSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEET-TEEEECCCSSSCC--------------CCGG
T ss_pred HHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCcccEEEEC-CeEEEeeccccccccCccccccccCCCCCCC
Confidence 964 457999999999999999999999999 999999999999964 88999999999865433 23468999
Q ss_pred cCCcccccc-----------CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHH
Q 014484 150 FTPPEYMRT-----------GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELV 218 (423)
Q Consensus 150 y~aPE~~~~-----------~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 218 (423)
|+|||.+.+ ..++.++|||||||++|+|++|..||....... ..............++...+.++.
T Consensus 194 y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~ 270 (313)
T 3cek_A 194 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI---SKLHAIIDPNHEIEFPDIPEKDLQ 270 (313)
T ss_dssp GCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHH---HHHHHHHCTTSCCCCCCCSCHHHH
T ss_pred cCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHH---HHHHHHHhcccccCCcccchHHHH
Confidence 999999875 468889999999999999999999886532111 112223333333445555578899
Q ss_pred HHHHHhcccCcCCCCCHHHHHHHHHh
Q 014484 219 RLASRCLQSEARERPNAKSLVISLMS 244 (423)
Q Consensus 219 ~li~~cl~~dp~~Rps~~~vl~~l~~ 244 (423)
++|.+||+.||.+|||+.+++++..-
T Consensus 271 ~li~~~l~~dp~~Rps~~ell~h~~~ 296 (313)
T 3cek_A 271 DVLKCCLKRDPKQRISIPELLAHPYV 296 (313)
T ss_dssp HHHHHHTCSSTTTSCCHHHHHTSHHH
T ss_pred HHHHHHccCCcccCcCHHHHhcCccc
Confidence 99999999999999999999988654
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-39 Score=314.00 Aligned_cols=236 Identities=16% Similarity=0.122 Sum_probs=178.6
Q ss_pred CCCCcccee-eeecceeeeeecCCChhhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccC
Q 014484 2 GGRCSKFSI-CWFHCHLKSSVLESSDLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW 79 (423)
Q Consensus 2 G~~g~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~ 79 (423)
|+||.||.+ .+.+..+++|++.... .+.+.+|++++..+ +||||+++++++.+++..++|||||. |+|.+++...
T Consensus 26 G~~g~V~~~~~~~g~~vAvK~~~~~~--~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL~~~l~~~ 102 (434)
T 2rio_A 26 GSSGTVVFQGSFQGRPVAVKRMLIDF--CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNLQDLVESK 102 (434)
T ss_dssp CSTTCEEEEEESSSSEEEEEEEEGGG--HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEHHHHHHTC
T ss_pred CCCeEEEEEEEECCeEEEEEEEcHHH--HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCHHHHHhcc
Confidence 899999654 3458889999875543 45678999999987 89999999999999999999999996 5999999642
Q ss_pred CCCC-----CCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCC-------------CCeEEccccccccCCCC
Q 014484 80 ETQP-----MKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKD-------------GNPRLSSFGLMKNSRDG 141 (423)
Q Consensus 80 ~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~-------------~~~kl~Dfg~~~~~~~~ 141 (423)
.... .++..++.++.||+.||.|||+++ |+||||||+|||++.+ +.+||+|||+++.....
T Consensus 103 ~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~ 181 (434)
T 2rio_A 103 NVSDENLKLQKEYNPISLLRQIASGVAHLHSLK-IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 181 (434)
T ss_dssp ------------CCHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC-
T ss_pred CCCchhhhhccchhHHHHHHHHHHHHHHHHHCC-ccccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCC
Confidence 2111 123346789999999999999999 9999999999999754 47999999999876543
Q ss_pred C--------ccccCcccCCcccccc-------CCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhcc-cc
Q 014484 142 K--------SYSTNLAFTPPEYMRT-------GRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMD-SA 204 (423)
Q Consensus 142 ~--------~~~~t~~y~aPE~~~~-------~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~-~~ 204 (423)
. ...||+.|+|||++.+ ..++.++|||||||++|||++ |..||........ ........ ..
T Consensus 182 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~--~i~~~~~~~~~ 259 (434)
T 2rio_A 182 QSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES--NIIRGIFSLDE 259 (434)
T ss_dssp -------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHH--HHHHTCCCCCC
T ss_pred CccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHH--HHhcCCCCccc
Confidence 2 3468999999999875 568999999999999999999 7877765322111 01111111 11
Q ss_pred ccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 205 LEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 205 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
.....+..+++++.++|.+||+.||.+|||+.++++|..
T Consensus 260 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~ 298 (434)
T 2rio_A 260 MKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPL 298 (434)
T ss_dssp CTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGG
T ss_pred ccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCCc
Confidence 111224467899999999999999999999999998754
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-40 Score=306.90 Aligned_cols=227 Identities=19% Similarity=0.257 Sum_probs=189.8
Q ss_pred CCCCccceeeee--cceeeeeecCCChh-------hHHHHHHHHHHHhcCC--CCCccceEeEEEeCCceeEEEecCCC-
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDL-------GETLNLEEAKAVGNLR--SERLANLIGCCYEADERLLVAEFMPN- 69 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~-------~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~lv~e~~~~- 69 (423)
|+||.||.+.+. +..+++|++..... ....+.+|+.++..++ |+||+++++++...+..++|||++.+
T Consensus 54 G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 133 (320)
T 3a99_A 54 GGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPV 133 (320)
T ss_dssp SSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEEECCSSE
T ss_pred CCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCcEEEEEEcCCCC
Confidence 899999999874 67788887755432 2246678999999996 59999999999999999999999976
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeec-CCCCeEEccccccccCCCC--Ccccc
Q 014484 70 ETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFD-KDGNPRLSSFGLMKNSRDG--KSYST 146 (423)
Q Consensus 70 ~~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~-~~~~~kl~Dfg~~~~~~~~--~~~~~ 146 (423)
++|.+++.. .+.+++..++.++.||+.||.|||+++ |+||||||+||+++ .++.+||+|||+++..... ....|
T Consensus 134 ~~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~~~~~~~~~g 210 (320)
T 3a99_A 134 QDLFDFITE--RGALQEELARSFFWQVLEAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDG 210 (320)
T ss_dssp EEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTTEEEECCCTTCEECCSSCBCCCCS
T ss_pred ccHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cEeCCCCHHHEEEeCCCCCEEEeeCccccccccccccCCCC
Confidence 899999964 457999999999999999999999999 99999999999998 7789999999999876543 33568
Q ss_pred CcccCCccccccCCC-CCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhc
Q 014484 147 NLAFTPPEYMRTGRV-TPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCL 225 (423)
Q Consensus 147 t~~y~aPE~~~~~~~-~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 225 (423)
|+.|+|||++.+..+ +.++|||||||++|+|++|..||...... .. ....++..+++++.++|.+||
T Consensus 211 t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~----------~~--~~~~~~~~~~~~~~~li~~~l 278 (320)
T 3a99_A 211 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI----------IR--GQVFFRQRVSSECQHLIRWCL 278 (320)
T ss_dssp CGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH----------HH--CCCCCSSCCCHHHHHHHHHHT
T ss_pred CccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhh----------hc--ccccccccCCHHHHHHHHHHc
Confidence 999999999887765 77899999999999999999888654211 00 011234456778999999999
Q ss_pred ccCcCCCCCHHHHHHHHH
Q 014484 226 QSEARERPNAKSLVISLM 243 (423)
Q Consensus 226 ~~dp~~Rps~~~vl~~l~ 243 (423)
+.||.+|||+++++++..
T Consensus 279 ~~dp~~Rps~~~ll~hp~ 296 (320)
T 3a99_A 279 ALRPSDRPTFEEIQNHPW 296 (320)
T ss_dssp CSSGGGSCCHHHHHTSGG
T ss_pred cCChhhCcCHHHHhcCHh
Confidence 999999999999998754
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-39 Score=302.89 Aligned_cols=227 Identities=19% Similarity=0.310 Sum_probs=185.5
Q ss_pred CCCCccceeeee--cceeeeeecCCChh-------hHHHHHHHHHHHhcC----CCCCccceEeEEEeCCceeEEEec-C
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDL-------GETLNLEEAKAVGNL----RSERLANLIGCCYEADERLLVAEF-M 67 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~-------~~~~~~~E~~~l~~l----~h~niv~~~~~~~~~~~~~lv~e~-~ 67 (423)
|+||.||.+.+. +..+++|++..... ....+.+|+.++.++ +||||+++++++...+..++|||+ +
T Consensus 42 G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~ 121 (312)
T 2iwi_A 42 GGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPL 121 (312)
T ss_dssp ETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----CEEEEECCS
T ss_pred CCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCCeEEEEEEecC
Confidence 899999999874 67788888865432 233456799999999 899999999999999999999999 7
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeec-CCCCeEEccccccccCCCC--Ccc
Q 014484 68 PNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFD-KDGNPRLSSFGLMKNSRDG--KSY 144 (423)
Q Consensus 68 ~~~~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~-~~~~~kl~Dfg~~~~~~~~--~~~ 144 (423)
.+++|.+++.. .+.+++..++.++.||+.||.|||+++ |+||||||+||+++ .++.++|+|||+++..... ...
T Consensus 122 ~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~kl~dfg~~~~~~~~~~~~~ 198 (312)
T 2iwi_A 122 PAQDLFDYITE--KGPLGEGPSRCFFGQVVAAIQHCHSRG-VVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDF 198 (312)
T ss_dssp SEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHHT-EECCCCSGGGEEEETTTTEEEECCCSSCEECCSSCBCCC
T ss_pred CCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCChhhEEEeCCCCeEEEEEcchhhhcccCccccc
Confidence 89999999964 446999999999999999999999999 99999999999998 7889999999998866543 345
Q ss_pred ccCcccCCccccccCCC-CCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHH
Q 014484 145 STNLAFTPPEYMRTGRV-TPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASR 223 (423)
Q Consensus 145 ~~t~~y~aPE~~~~~~~-~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 223 (423)
.+|..|+|||++.+..+ +.++|||||||++|+|++|..||...... .. ....++..++.++.++|.+
T Consensus 199 ~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----------~~--~~~~~~~~~~~~~~~li~~ 266 (312)
T 2iwi_A 199 DGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEI----------LE--AELHFPAHVSPDCCALIRR 266 (312)
T ss_dssp CSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH----------HH--TCCCCCTTSCHHHHHHHHH
T ss_pred CCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHH----------hh--hccCCcccCCHHHHHHHHH
Confidence 68999999999887665 45899999999999999999888653111 00 1123445667889999999
Q ss_pred hcccCcCCCCCHHHHHHHHH
Q 014484 224 CLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 224 cl~~dp~~Rps~~~vl~~l~ 243 (423)
||+.||.+|||++++++|..
T Consensus 267 ~l~~~p~~Rps~~e~l~~~~ 286 (312)
T 2iwi_A 267 CLAPKPSSRPSLEEILLDPW 286 (312)
T ss_dssp HTCSSTTTSCCHHHHHHSTT
T ss_pred HccCChhhCcCHHHHhcChh
Confidence 99999999999999998754
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-38 Score=310.41 Aligned_cols=231 Identities=15% Similarity=0.139 Sum_probs=177.6
Q ss_pred CCCCccc-eeeeecceeeeeecCCChhhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccC
Q 014484 2 GGRCSKF-SICWFHCHLKSSVLESSDLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW 79 (423)
Q Consensus 2 G~~g~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~ 79 (423)
|+||.|| .+.+.+..+++|++..... ..+.+|+++++.+ +|||||++++++.+....|+|||||.| +|.+++...
T Consensus 35 G~~G~V~~~~~~~~~~vAvK~~~~~~~--~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~g-~L~~~l~~~ 111 (432)
T 3p23_A 35 GAEGTIVYRGMFDNRDVAVKRILPECF--SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCAA-TLQEYVEQK 111 (432)
T ss_dssp CGGGCEEEEEESSSSEEEEEEECTTTE--EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCSE-EHHHHHHSS
T ss_pred CcCEEEEEEEEeCCeEEEEEEECHHHH--HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCCC-CHHHHHHhc
Confidence 8999854 4455688899998865432 3467899999999 899999999999999999999999965 999999643
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecC---C--CCeEEccccccccCCCC-------CccccC
Q 014484 80 ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK---D--GNPRLSSFGLMKNSRDG-------KSYSTN 147 (423)
Q Consensus 80 ~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~---~--~~~kl~Dfg~~~~~~~~-------~~~~~t 147 (423)
...+++..++.++.||+.||.|||+++ |+||||||+|||++. + ..++|+|||+++..... ....||
T Consensus 112 -~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt 189 (432)
T 3p23_A 112 -DFAHLGLEPITLLQQTTSGLAHLHSLN-IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGT 189 (432)
T ss_dssp -SCCCCSSCHHHHHHHHHHHHHHHHHTT-CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC------------CCSC
T ss_pred -CCCccchhHHHHHHHHHHHHHHHHHCc-CEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcceeeccccCCC
Confidence 334566677899999999999999999 999999999999953 2 35789999999866532 235689
Q ss_pred cccCCccccc---cCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccc-cc-cCCCChhHHHHHHHHH
Q 014484 148 LAFTPPEYMR---TGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDS-AL-EGHFSNDEGTELVRLA 221 (423)
Q Consensus 148 ~~y~aPE~~~---~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~l~~li 221 (423)
+.|+|||++. +..++.++|||||||++|||++ |..||......... ..... .. ........+..+.++|
T Consensus 190 ~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~li 264 (432)
T 3p23_A 190 EGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQAN-----ILLGACSLDCLHPEKHEDVIARELI 264 (432)
T ss_dssp TTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHH-----HHTTCCCCTTSCTTCHHHHHHHHHH
T ss_pred cCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHH-----HHhccCCccccCccccccHHHHHHH
Confidence 9999999987 3567889999999999999999 77776543211111 11111 11 1112234577799999
Q ss_pred HHhcccCcCCCCCHHHHHHHH
Q 014484 222 SRCLQSEARERPNAKSLVISL 242 (423)
Q Consensus 222 ~~cl~~dp~~Rps~~~vl~~l 242 (423)
.+||+.||.+|||++++++|.
T Consensus 265 ~~~L~~dP~~Rps~~evl~hp 285 (432)
T 3p23_A 265 EKMIAMDPQKRPSAKHVLKHP 285 (432)
T ss_dssp HHHSCSSGGGSCCHHHHHTST
T ss_pred HHHHhCCHhhCCCHHHHHhCc
Confidence 999999999999999999874
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-38 Score=320.49 Aligned_cols=237 Identities=16% Similarity=0.127 Sum_probs=187.8
Q ss_pred CCCCccceeeee--cceeeeeecCCC--hhhHHHHHHHHHHHhcCCCCCccceEeEEEe------CCceeEEEecCCCCC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYE------ADERLLVAEFMPNET 71 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~------~~~~~lv~e~~~~~~ 71 (423)
|+||.||.+.+. +..+++|++... ......+.+|++++..++||||+++++++.. ++..++||||++||+
T Consensus 25 G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~LVmEy~~ggs 104 (676)
T 3qa8_A 25 GGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGD 104 (676)
T ss_dssp CSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCCCEEECCSSCB
T ss_pred CCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeEEEEEEeCCCCC
Confidence 899999999874 677888887543 3446778999999999999999999999866 667899999999999
Q ss_pred HHhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCC---eEEccccccccCCCC---Ccc
Q 014484 72 LAKHLFHWE-TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGN---PRLSSFGLMKNSRDG---KSY 144 (423)
Q Consensus 72 L~~~i~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~---~kl~Dfg~~~~~~~~---~~~ 144 (423)
|.+++.... ...+++..++.++.|++.||.|||++| |+||||||+||+++.++. ++|+|||++...... ...
T Consensus 105 L~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~g-IVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~~~~~~~ 183 (676)
T 3qa8_A 105 LRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR-IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEF 183 (676)
T ss_dssp HHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTT-BCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTSCCCCCCC
T ss_pred HHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCCHHHeEeecCCCceeEEEcccccccccccccccccc
Confidence 999997532 236999999999999999999999999 999999999999987765 899999999876543 335
Q ss_pred ccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhc----------hhhhhc--------ccccc
Q 014484 145 STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSK----------NFLLLM--------DSALE 206 (423)
Q Consensus 145 ~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~----------~~~~~~--------~~~~~ 206 (423)
.||+.|+|||.+.+..++.++|||||||++|+|++|..||........-.. ...... .....
T Consensus 184 ~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p 263 (676)
T 3qa8_A 184 VGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTP 263 (676)
T ss_dssp CSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCSSSCCCCSSSCCS
T ss_pred cCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhccccccccccCCc
Confidence 689999999999999999999999999999999999998865311110000 000000 00111
Q ss_pred CCCChhHHHHHHHHHHHhcccCcCCCCCHHHHH
Q 014484 207 GHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239 (423)
Q Consensus 207 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl 239 (423)
...+..+++.+.++|.+||..||.+|||+.+++
T Consensus 264 ~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL 296 (676)
T 3qa8_A 264 NHLSGILAGKLERWLQCMLMWHQRQRGTDPQNP 296 (676)
T ss_dssp CCCCGGGHHHHHHHHHHHSCSSCC---CCTTCC
T ss_pred hhhchhhhHHHHHHHHHHccCCHhhCcCHHHHh
Confidence 224456789999999999999999999998854
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-38 Score=294.95 Aligned_cols=236 Identities=16% Similarity=0.221 Sum_probs=173.4
Q ss_pred CCCCccceeeee--cceeeeeecCCChh--h-HHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDL--G-ETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~--~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
|+||.||.+.+. +..+++|++..... . ...+.++..++..++||||+++++++..++..++||||+ ++.+..+.
T Consensus 36 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~~~~l~ 114 (318)
T 2dyl_A 36 GTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM-GTCAEKLK 114 (318)
T ss_dssp ----CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC-SEEHHHHH
T ss_pred cCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEecc-CCcHHHHH
Confidence 899999999985 77888888755432 2 233444555788889999999999999999999999999 55666555
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHcC-CCeeeccCCCCCeeecCCCCeEEccccccccCCCC---CccccCcccCC
Q 014484 77 FHWETQPMKWAMRLRVALYLAQALEYCSSK-GRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTP 152 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~~t~~y~a 152 (423)
.. ....+++..++.++.|++.||.|||++ + ++||||||+||+++.++.++|+|||++...... ....+|+.|+|
T Consensus 115 ~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~a 192 (318)
T 2dyl_A 115 KR-MQGPIPERILGKMTVAIVKALYYLKEKHG-VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMA 192 (318)
T ss_dssp HH-HTSCCCHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCGGGEEECTTSCEEECCCTTC--------------CCTTCC
T ss_pred HH-hccCCCHHHHHHHHHHHHHHHHHHHhhCC-EEeCCCCHHHEEECCCCCEEEEECCCchhccCCccccccCCCccccC
Confidence 32 346799999999999999999999995 8 999999999999999999999999998765433 23468999999
Q ss_pred ccccc-----cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccc-cCCCChhHHHHHHHHHHHhcc
Q 014484 153 PEYMR-----TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSAL-EGHFSNDEGTELVRLASRCLQ 226 (423)
Q Consensus 153 PE~~~-----~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~ 226 (423)
||.+. +..++.++|||||||++|+|++|..||......... ......... .......+++++.++|.+||+
T Consensus 193 PE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~ 269 (318)
T 2dyl_A 193 PERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEV---LTKVLQEEPPLLPGHMGFSGDFQSFVKDCLT 269 (318)
T ss_dssp HHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHH---HHHHHHSCCCCCCSSSCCCHHHHHHHHHHTC
T ss_pred hhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHH---HHHHhccCCCCCCccCCCCHHHHHHHHHHcc
Confidence 99984 456889999999999999999999888653211111 111111110 111122457889999999999
Q ss_pred cCcCCCCCHHHHHHHHH
Q 014484 227 SEARERPNAKSLVISLM 243 (423)
Q Consensus 227 ~dp~~Rps~~~vl~~l~ 243 (423)
.||.+|||++++++|..
T Consensus 270 ~dp~~Rps~~~ll~h~~ 286 (318)
T 2dyl_A 270 KDHRKRPKYNKLLEHSF 286 (318)
T ss_dssp SCTTTSCCHHHHTTSHH
T ss_pred CChhHCcCHHHHhhCHH
Confidence 99999999999998754
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-38 Score=290.39 Aligned_cols=217 Identities=14% Similarity=0.091 Sum_probs=174.2
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||.+.+. +..+++|++.... .....+.+|+.++..++||||+++++++..++..|+||||++|++|.++
T Consensus 42 G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~ 121 (286)
T 3uqc_A 42 VPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAEWIRGGSLQEV 121 (286)
T ss_dssp STTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCEEEHHHH
T ss_pred cCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEEEecCCCCHHHH
Confidence 899999999986 7888999886653 2347889999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCCccccCcccCCccc
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEY 155 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~t~~y~aPE~ 155 (423)
+.+ + ....++.+++.|++.||.|||++| |+||||||+|||++.+|.++|+++| |++
T Consensus 122 l~~---~-~~~~~~~~i~~ql~~aL~~lH~~g-ivH~Dikp~NIll~~~g~~kl~~~~----------------~~~--- 177 (286)
T 3uqc_A 122 ADT---S-PSPVGAIRAMQSLAAAADAAHRAG-VALSIDHPSRVRVSIDGDVVLAYPA----------------TMP--- 177 (286)
T ss_dssp HTT---C-CCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEEETTSCEEECSCC----------------CCT---
T ss_pred Hhc---C-CChHHHHHHHHHHHHHHHHHHHCC-CccCCCCcccEEEcCCCCEEEEecc----------------ccC---
Confidence 942 2 466678999999999999999999 9999999999999999999998554 333
Q ss_pred cccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccc--cCCCChhHHHHHHHHHHHhcccCcCCCC
Q 014484 156 MRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSAL--EGHFSNDEGTELVRLASRCLQSEARERP 233 (423)
Q Consensus 156 ~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~cl~~dp~~Rp 233 (423)
.++.++|||||||++|+|+||..||.......... .......... .......+++++.++|.+||+.||.+|
T Consensus 178 ----~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R- 251 (286)
T 3uqc_A 178 ----DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLA-PAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR- 251 (286)
T ss_dssp ----TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSE-ECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-
T ss_pred ----CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhH-HHHHHhccCCCChhhcccCCCHHHHHHHHHHcccCCccC-
Confidence 36889999999999999999999987642110000 0000000000 001223467889999999999999999
Q ss_pred CHHHHHHHHHhhhhh
Q 014484 234 NAKSLVISLMSLQKE 248 (423)
Q Consensus 234 s~~~vl~~l~~~~~~ 248 (423)
|+.++++.|..+...
T Consensus 252 s~~el~~~L~~~~~~ 266 (286)
T 3uqc_A 252 SASTLLNLMQQATAV 266 (286)
T ss_dssp CHHHHHHHHHHHHC-
T ss_pred CHHHHHHHHHHHhcc
Confidence 999999999987654
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-38 Score=290.66 Aligned_cols=218 Identities=14% Similarity=0.135 Sum_probs=173.7
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHH-hcCCCCCccceEeEEEe----CCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAV-GNLRSERLANLIGCCYE----ADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~~~~~~~~----~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||.+.+. +..+++|++... ..+.+|+.++ +.++||||+++++++.. +...++||||++|++|.+
T Consensus 29 G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~ 104 (299)
T 3m2w_A 29 GINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFS 104 (299)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCCSCBHHH
T ss_pred CCCeEEEEEEEcCCCcEEEEEEeccc----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecCCCcHHH
Confidence 899999999884 677888887543 4567888888 55599999999999987 667899999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecC---CCCeEEccccccccCCCCCccccCcccC
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK---DGNPRLSSFGLMKNSRDGKSYSTNLAFT 151 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~---~~~~kl~Dfg~~~~~~~~~~~~~t~~y~ 151 (423)
++....+..+++..++.++.|++.||.|||+++ |+||||||+||+++. ++.++|+|||++....
T Consensus 105 ~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~------------ 171 (299)
T 3m2w_A 105 RIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN-IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT------------ 171 (299)
T ss_dssp HHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESSSSTTCCEEECCCTTCEECT------------
T ss_pred HHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEecCCCCCcEEEeccccccccc------------
Confidence 998755667999999999999999999999999 999999999999988 7889999999876432
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCC----hhHHHHHHHHHHHhccc
Q 014484 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFS----NDEGTELVRLASRCLQS 227 (423)
Q Consensus 152 aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~ 227 (423)
+..++.++|||||||++|+|++|..||.................. ....++ ..+++++.+++.+||+.
T Consensus 172 ------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~li~~~l~~ 243 (299)
T 3m2w_A 172 ------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM--GQYEFPNPEWSEVSEEVKMLIRNLLKT 243 (299)
T ss_dssp ------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCT--TCCSSCHHHHTTSCHHHHHHHHHHTCS
T ss_pred ------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhh--ccccCCchhcccCCHHHHHHHHHHccc
Confidence 245788999999999999999999988654221111111100000 011122 23578899999999999
Q ss_pred CcCCCCCHHHHHHHHHh
Q 014484 228 EARERPNAKSLVISLMS 244 (423)
Q Consensus 228 dp~~Rps~~~vl~~l~~ 244 (423)
||.+|||+.++++|..-
T Consensus 244 dP~~Rps~~e~l~hp~~ 260 (299)
T 3m2w_A 244 EPTQRMTITEFMNHPWI 260 (299)
T ss_dssp STTTSCCHHHHHTSHHH
T ss_pred ChhhCCCHHHHhcChhh
Confidence 99999999999988654
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-38 Score=305.08 Aligned_cols=227 Identities=14% Similarity=0.075 Sum_probs=172.7
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcCCC-CCccc---------------------eEeE
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRS-ERLAN---------------------LIGC 53 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h-~niv~---------------------~~~~ 53 (423)
|+||.||++.+. +..+++|++.... ...+.+.+|+.++..+.| +|+.. +..+
T Consensus 89 G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (413)
T 3dzo_A 89 EDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRV 168 (413)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC-------
T ss_pred CCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCCCCccccc
Confidence 899999999986 8889999876322 235678999999999977 32211 1111
Q ss_pred EEe-----CCceeEEEecCCCCCHHhhhc-----cCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecC
Q 014484 54 CYE-----ADERLLVAEFMPNETLAKHLF-----HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK 123 (423)
Q Consensus 54 ~~~-----~~~~~lv~e~~~~~~L~~~i~-----~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~ 123 (423)
+.. ....+++|+++ +++|.+++. ...+..+++..++.++.||+.||.|||+++ |+||||||+|||++.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-iiHrDiKp~NILl~~ 246 (413)
T 3dzo_A 169 RLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG-LVHTYLRPVDIVLDQ 246 (413)
T ss_dssp --------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECT
T ss_pred cCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCcccceEEEec
Confidence 121 12356777776 569999884 223456888899999999999999999999 999999999999999
Q ss_pred CCCeEEccccccccCCCC-CccccCcccCCcccc----------ccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHh
Q 014484 124 DGNPRLSSFGLMKNSRDG-KSYSTNLAFTPPEYM----------RTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLI 192 (423)
Q Consensus 124 ~~~~kl~Dfg~~~~~~~~-~~~~~t~~y~aPE~~----------~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~ 192 (423)
++.+||+|||+++..... ....| +.|+|||++ .+..++.++|||||||++|+|++|..||......
T Consensus 247 ~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~-- 323 (413)
T 3dzo_A 247 RGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAAL-- 323 (413)
T ss_dssp TCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGG--
T ss_pred CCeEEEEeccceeecCCccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchh--
Confidence 999999999998866544 33456 999999998 5555888999999999999999999998764211
Q ss_pred hhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014484 193 RSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (423)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~ 241 (423)
........ ....+++++.++|.+||+.||.+|||+.+++++
T Consensus 324 --~~~~~~~~------~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~ 364 (413)
T 3dzo_A 324 --GGSEWIFR------SCKNIPQPVRALLEGFLRYPKEDRLLPLQAMET 364 (413)
T ss_dssp --SCSGGGGS------SCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred --hhHHHHHh------hcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 11111111 112346789999999999999999999998876
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-38 Score=296.89 Aligned_cols=230 Identities=14% Similarity=0.041 Sum_probs=176.4
Q ss_pred CCCCccceeeeecceeeeeecCCCh---------hhHHHHHHHHHHHhcCC---------CCCccceEeEE---------
Q 014484 2 GGRCSKFSICWFHCHLKSSVLESSD---------LGETLNLEEAKAVGNLR---------SERLANLIGCC--------- 54 (423)
Q Consensus 2 G~~g~v~~~~~~~~~~~~~~~~~~~---------~~~~~~~~E~~~l~~l~---------h~niv~~~~~~--------- 54 (423)
|+||.||++.+.+..+++|++.... .....+.+|+.+++.++ ||||+++.+++
T Consensus 31 G~~g~V~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~~~~~~~hp~ 110 (336)
T 2vuw_A 31 GVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPL 110 (336)
T ss_dssp ETTEEEEEEEETTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEEEEESSCCHH
T ss_pred cCceEEEEEEeCCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcceeEecCCCcHH
Confidence 8999999999988889999886542 12367889999998886 66666666654
Q ss_pred --------Ee-------------CCceeEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHH-cCCCeeec
Q 014484 55 --------YE-------------ADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCS-SKGRALYH 112 (423)
Q Consensus 55 --------~~-------------~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH-~~~~iiH~ 112 (423)
.+ .+..|+||||+++|++.+.+. .+.+++..+..++.||+.||.||| +++ |+||
T Consensus 111 iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~---~~~~~~~~~~~i~~qi~~aL~~lH~~~~-ivHr 186 (336)
T 2vuw_A 111 LLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMR---TKLSSLATAKSILHQLTASLAVAEASLR-FEHR 186 (336)
T ss_dssp HHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGT---TTCCCHHHHHHHHHHHHHHHHHHHHHHC-CBCS
T ss_pred HHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHhCC-EeEC
Confidence 32 677999999999997666663 356899999999999999999999 899 9999
Q ss_pred cCCCCCeeecCCC--------------------CeEEccccccccCCCCCccccCcccCCccccccCCCCCCcceehhHH
Q 014484 113 DLNAYRILFDKDG--------------------NPRLSSFGLMKNSRDGKSYSTNLAFTPPEYMRTGRVTPESVVYSFGT 172 (423)
Q Consensus 113 dlkp~Nill~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~ 172 (423)
||||+|||++.++ .+||+|||+++..... ...||+.|+|||++.+.. +.++||||+|+
T Consensus 187 DlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~ 264 (336)
T 2vuw_A 187 DLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-IVVFCDVSMDEDLFTGDG-DYQFDIYRLMK 264 (336)
T ss_dssp CCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-EEECCCCTTCSGGGCCCS-SHHHHHHHHHH
T ss_pred CCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-cEEEeecccChhhhcCCC-ccceehhhhhC
Confidence 9999999999887 8999999999876543 457899999999998766 88999999877
Q ss_pred H-HHHHhhCCCCCCchhhHHhhhchhhhhcc--ccccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHH-HHH
Q 014484 173 M-LLDLLSGKHIPPSHALDLIRSKNFLLLMD--SALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV-ISL 242 (423)
Q Consensus 173 ~-l~el~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl-~~l 242 (423)
+ .+++++|..||.................. .......+..+++++.+||.+||++| |+++++ +|-
T Consensus 265 ~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l~~Hp 333 (336)
T 2vuw_A 265 KENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLLCQHS 333 (336)
T ss_dssp HHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHHHHCG
T ss_pred CCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC-----CHHHHHhcCC
Confidence 7 77788898776542110011111111111 11111123457899999999999977 999999 763
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=4.9e-33 Score=279.25 Aligned_cols=162 Identities=14% Similarity=0.106 Sum_probs=124.3
Q ss_pred ecceeeeeecCCC-----------hhhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccCC
Q 014484 13 FHCHLKSSVLESS-----------DLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80 (423)
Q Consensus 13 ~~~~~~~~~~~~~-----------~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~ 80 (423)
.+..+++|++... ....+.|.+|+++|+++ .|+||+++++++++++..||||||++|++|.++|.+
T Consensus 258 fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i~~-- 335 (569)
T 4azs_A 258 FGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLAA-- 335 (569)
T ss_dssp ECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEEECCCSEEHHHHHHT--
T ss_pred ccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEEecCCCCcHHHHHHh--
Confidence 5777888877543 23455789999999999 799999999999999999999999999999999964
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC----ccccCcccCCcccc
Q 014484 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK----SYSTNLAFTPPEYM 156 (423)
Q Consensus 81 ~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~----~~~~t~~y~aPE~~ 156 (423)
+++++.. +|+.||+.||.|+|++| ||||||||+|||++.+|++||+|||+++...... +..||+.|||||++
T Consensus 336 ~~~l~~~---~I~~QIl~AL~ylH~~G-IIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~~~~t~vGTp~YmAPE~l 411 (569)
T 4azs_A 336 GEEIDRE---KILGSLLRSLAALEKQG-FWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSWPTNLVQSFFVFVNELF 411 (569)
T ss_dssp TCCCCHH---HHHHHHHHHHHHHHHTT-CEESCCCGGGEEECTTSCEEECCCTTEESCC---CCSHHHHHHHHHHHHHHC
T ss_pred CCCCCHH---HHHHHHHHHHHHHHHCC-ceeccCchHhEEECCCCCEEEeecccCeeCCCCCccccCceechhhccHHHh
Confidence 5567765 58899999999999999 9999999999999999999999999998765432 34689999999999
Q ss_pred ccCCCCCCcceehhHHHHHHHhhCC
Q 014484 157 RTGRVTPESVVYSFGTMLLDLLSGK 181 (423)
Q Consensus 157 ~~~~~~~~~Di~slG~~l~el~~g~ 181 (423)
.+ .+..++|+||+|++++++.++.
T Consensus 412 ~g-~~~~~~d~~s~g~~~~~l~~~~ 435 (569)
T 4azs_A 412 AE-NKSWNGFWRSAPVHPFNLPQPW 435 (569)
T ss_dssp ------------------CCCCTTH
T ss_pred CC-CCCCcccccccccchhhhcccc
Confidence 75 4677899999999998887664
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.1e-27 Score=235.89 Aligned_cols=169 Identities=11% Similarity=0.088 Sum_probs=142.1
Q ss_pred CCCCccceeeeecceeeeeecCCChh---------hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICWFHCHLKSSVLESSDL---------GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~~~~~~~~~~~~~~~~---------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 72 (423)
|+||.||++.+.+..+++|....... ..+.+.+|++++++++||||+++..++...+..|+||||++|++|
T Consensus 347 G~fg~Vy~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE~~~ggsL 426 (540)
T 3en9_A 347 GAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMSYINGKLA 426 (540)
T ss_dssp -CCEEEEEEECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEECCCSEEH
T ss_pred CCCEEEEEEEECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEECCCCCCH
Confidence 89999999988777777766433221 134578999999999999999777777788888999999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-----------
Q 014484 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----------- 141 (423)
Q Consensus 73 ~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----------- 141 (423)
.+++.. +..++.|++.||.|||+++ |+||||||+|||++. .+||+|||+++.....
T Consensus 427 ~~~l~~----------~~~i~~qi~~aL~~LH~~g-IiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~~~~~~~ 493 (540)
T 3en9_A 427 KDVIED----------NLDIAYKIGEIVGKLHKND-VIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAVDLIVFK 493 (540)
T ss_dssp HHHSTT----------CTHHHHHHHHHHHHHHHTT-EECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHHHHHHHHH
T ss_pred HHHHHH----------HHHHHHHHHHHHHHHHHCc-CccCCCCHHHEEECC--eEEEEECccCEECCCccccccchhhhh
Confidence 999943 5689999999999999999 999999999999998 9999999999987653
Q ss_pred CccccCcccCCcccccc--CCCCCCcceehhHHHHHHHhhCCCC
Q 014484 142 KSYSTNLAFTPPEYMRT--GRVTPESVVYSFGTMLLDLLSGKHI 183 (423)
Q Consensus 142 ~~~~~t~~y~aPE~~~~--~~~~~~~Di~slG~~l~el~~g~~~ 183 (423)
....||+.|||||++.. ..|+..+|+||..+-..+.+.++.+
T Consensus 494 ~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~r 537 (540)
T 3en9_A 494 KAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRAR 537 (540)
T ss_dssp HHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSC
T ss_pred hhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccc
Confidence 24568999999999986 5688889999999888887766644
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=4.3e-22 Score=182.55 Aligned_cols=132 Identities=12% Similarity=0.063 Sum_probs=107.2
Q ss_pred CCCCccceeeee-cceeeeeecCCCh-------------------hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCcee
Q 014484 2 GGRCSKFSICWF-HCHLKSSVLESSD-------------------LGETLNLEEAKAVGNLRSERLANLIGCCYEADERL 61 (423)
Q Consensus 2 G~~g~v~~~~~~-~~~~~~~~~~~~~-------------------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 61 (423)
|+||.||.+.+. +..+++|++.... .....+.+|+.++..++ | +++.+++.. +..+
T Consensus 101 G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~~~-~~~~ 176 (282)
T 1zar_A 101 GKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVYAW-EGNA 176 (282)
T ss_dssp CSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEEEE-ETTE
T ss_pred CCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEEec-cceE
Confidence 899999999984 6778888875432 13457889999999998 5 666665544 5579
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC
Q 014484 62 LVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG 141 (423)
Q Consensus 62 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 141 (423)
+||||++|++|.+ +.. .....++.|++.||.|||++| |+||||||+|||++ ++.++|+|||+++.
T Consensus 177 lvmE~~~g~~L~~-l~~--------~~~~~i~~qi~~~l~~lH~~g-iiHrDlkp~NILl~-~~~vkl~DFG~a~~---- 241 (282)
T 1zar_A 177 VLMELIDAKELYR-VRV--------ENPDEVLDMILEEVAKFYHRG-IVHGDLSQYNVLVS-EEGIWIIDFPQSVE---- 241 (282)
T ss_dssp EEEECCCCEEGGG-CCC--------SCHHHHHHHHHHHHHHHHHTT-EECSCCSTTSEEEE-TTEEEECCCTTCEE----
T ss_pred EEEEecCCCcHHH-cch--------hhHHHHHHHHHHHHHHHHHCC-CEeCCCCHHHEEEE-CCcEEEEECCCCeE----
Confidence 9999999999988 521 234579999999999999999 99999999999999 99999999999864
Q ss_pred CccccCcccCCccccc
Q 014484 142 KSYSTNLAFTPPEYMR 157 (423)
Q Consensus 142 ~~~~~t~~y~aPE~~~ 157 (423)
+..++|||.+.
T Consensus 242 -----~~~~~a~e~l~ 252 (282)
T 1zar_A 242 -----VGEEGWREILE 252 (282)
T ss_dssp -----TTSTTHHHHHH
T ss_pred -----CCCCCHHHHHH
Confidence 34578899875
|
| >4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.84 E-value=2.4e-20 Score=149.58 Aligned_cols=103 Identities=18% Similarity=0.289 Sum_probs=99.9
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHH
Q 014484 317 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 396 (423)
Q Consensus 317 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~ 396 (423)
.+..++.+|+.+++.|+|++|++.|++||+++|. +..+|+++|.||.++|++++|+.++++|++++|+++.+|+++|.+
T Consensus 12 ~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~ 90 (126)
T 4gco_A 12 LAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPE-NAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRKAAC 90 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHHHHH
Confidence 4567888999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhcccccc
Q 014484 397 LFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 397 ~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
+..+|++++|+++|++|++++|.+
T Consensus 91 ~~~~~~~~~A~~~~~~al~l~P~~ 114 (126)
T 4gco_A 91 LVAMREWSKAQRAYEDALQVDPSN 114 (126)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHCCCHHHHHHHHHHHHHHCcCC
Confidence 999999999999999999999975
|
| >2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8 | Back alignment and structure |
|---|
Probab=99.83 E-value=3e-20 Score=152.23 Aligned_cols=109 Identities=15% Similarity=0.074 Sum_probs=101.3
Q ss_pred hhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCC------c-----HHHHhhHHHHHHhcCChHHHHHHHHHhHh
Q 014484 313 SQMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMV------S-----PTVYARRCLSYLMNDMPQEALGDAMQAQV 381 (423)
Q Consensus 313 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~------~-----~~~~~~~~~~~~~~~~~~~A~~~~~~a~~ 381 (423)
.....+..++..|+.+++.|+|++|+..|++||+++|+. + ..+|+|+|.|+.++|+|++|+.+|++||+
T Consensus 6 ~~~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~ 85 (159)
T 2hr2_A 6 KEVVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALH 85 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 345577889999999999999999999999999999982 1 23999999999999999999999999999
Q ss_pred c-------CCCchHHH----HHHHHHHHhCCChHHHHHHHHHhhccccccC
Q 014484 382 V-------SPDWPTAL----YLQAACLFSLGMENDARETLKDGTNLEAKKN 421 (423)
Q Consensus 382 l-------~p~~~~a~----~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 421 (423)
+ +|+++++| |++|.+|..+|++++|+++|++|++++|++.
T Consensus 86 l~n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~ 136 (159)
T 2hr2_A 86 YFNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERK 136 (159)
T ss_dssp HHHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred hhhccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcH
Confidence 9 99999999 9999999999999999999999999999864
|
| >4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.77 E-value=2.2e-18 Score=138.23 Aligned_cols=104 Identities=16% Similarity=0.145 Sum_probs=97.4
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCc-------h
Q 014484 315 MQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW-------P 387 (423)
Q Consensus 315 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~-------~ 387 (423)
.+.+..+++.|+.++++|+|++|+..|++||+++|+ +..+|+++|.||.++|+|++|+.++++|++++|++ +
T Consensus 5 ~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~-~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a 83 (127)
T 4gcn_A 5 TDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPS-NITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIA 83 (127)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHH
Confidence 345668889999999999999999999999999999 99999999999999999999999999999999876 4
Q ss_pred HHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 014484 388 TALYLQAACLFSLGMENDARETLKDGTNLEAK 419 (423)
Q Consensus 388 ~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 419 (423)
.+|+++|.++..+|++++|++.|++|++++|.
T Consensus 84 ~~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~ 115 (127)
T 4gcn_A 84 KAMSRAGNAFQKQNDLSLAVQWFHRSLSEFRD 115 (127)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcC
Confidence 68999999999999999999999999988765
|
| >3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A | Back alignment and structure |
|---|
Probab=99.76 E-value=3.8e-18 Score=140.89 Aligned_cols=103 Identities=10% Similarity=-0.021 Sum_probs=98.7
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHH
Q 014484 317 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 396 (423)
Q Consensus 317 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~ 396 (423)
....+...|..+++.|+|++|+..|+++++++|. ++.+|+++|.||..+|+|++|+..|++|++++|+++.+|+++|.+
T Consensus 35 ~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~-~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~~~~~lg~~ 113 (151)
T 3gyz_A 35 MMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFY-NVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQC 113 (151)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcHHHHHHHHH
Confidence 4456788999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhcccccc
Q 014484 397 LFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 397 ~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
|..+|++++|+..|++|++++|..
T Consensus 114 ~~~lg~~~eA~~~~~~al~l~~~~ 137 (151)
T 3gyz_A 114 QLRLKAPLKAKECFELVIQHSNDE 137 (151)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCCCH
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCH
Confidence 999999999999999999998863
|
| >3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.74 E-value=6.1e-18 Score=141.54 Aligned_cols=105 Identities=20% Similarity=0.199 Sum_probs=100.4
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhcC------------------CCCCcHHHHhhHHHHHHhcCChHHHHHHH
Q 014484 315 MQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDG------------------GTMVSPTVYARRCLSYLMNDMPQEALGDA 376 (423)
Q Consensus 315 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~------------------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~ 376 (423)
+..+..++..|+.+++.|+|++|+..|++||++ +|. +..+|+++|.||.++|+|++|+.+|
T Consensus 8 ~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~nla~~~~~~~~~~~A~~~~ 86 (162)
T 3rkv_A 8 LKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRK-NIPLYANMSQCYLNIGDLHEAEETS 86 (162)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHT-HHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHH-HHHHHHHHHHHHHhcCcHHHHHHHH
Confidence 456778999999999999999999999999999 777 7899999999999999999999999
Q ss_pred HHhHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 014484 377 MQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 377 ~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
++|++++|+++.+|+++|.+|..+|+|++|+.+|++|++++|.+
T Consensus 87 ~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~ 130 (162)
T 3rkv_A 87 SEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAA 130 (162)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGG
T ss_pred HHHHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCC
Confidence 99999999999999999999999999999999999999999975
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=2.1e-18 Score=156.09 Aligned_cols=125 Identities=12% Similarity=0.055 Sum_probs=97.7
Q ss_pred CCCCccceeee--ecce--eeeeecCCChh-------------------------hHHHHHHHHHHHhcCCCCCc--cce
Q 014484 2 GGRCSKFSICW--FHCH--LKSSVLESSDL-------------------------GETLNLEEAKAVGNLRSERL--ANL 50 (423)
Q Consensus 2 G~~g~v~~~~~--~~~~--~~~~~~~~~~~-------------------------~~~~~~~E~~~l~~l~h~ni--v~~ 50 (423)
|+||.||.+.+ .+.. +++|++..... ....+.+|+.++..+.|+++ +.+
T Consensus 58 G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~ 137 (258)
T 1zth_A 58 GKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEAGVSVPQP 137 (258)
T ss_dssp CSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHTTCCCCCE
T ss_pred cceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhCCCCCCeE
Confidence 89999999998 4777 88887543211 12367899999999988764 444
Q ss_pred EeEEEeCCceeEEEecCCC-C----CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHH-cCCCeeeccCCCCCeeecCC
Q 014484 51 IGCCYEADERLLVAEFMPN-E----TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCS-SKGRALYHDLNAYRILFDKD 124 (423)
Q Consensus 51 ~~~~~~~~~~~lv~e~~~~-~----~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH-~~~~iiH~dlkp~Nill~~~ 124 (423)
+++ +..++||||+.+ | +|.+.... .++..+..++.|++.+|.+|| +.| |+||||||+|||++.
T Consensus 138 ~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~g-ivHrDlkp~NILl~~- 206 (258)
T 1zth_A 138 YTY----MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQEAE-LVHADLSEYNIMYID- 206 (258)
T ss_dssp EEE----ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTSC-EECSSCSTTSEEESS-
T ss_pred EEc----CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHCC-EEeCCCCHHHEEEcC-
Confidence 443 357899999942 3 77776532 235567899999999999999 999 999999999999998
Q ss_pred CCeEEccccccccC
Q 014484 125 GNPRLSSFGLMKNS 138 (423)
Q Consensus 125 ~~~kl~Dfg~~~~~ 138 (423)
.++|+|||++...
T Consensus 207 -~~~liDFG~a~~~ 219 (258)
T 1zth_A 207 -KVYFIDMGQAVTL 219 (258)
T ss_dssp -SEEECCCTTCEET
T ss_pred -cEEEEECcccccC
Confidence 8999999998764
|
| >3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.74 E-value=2.4e-17 Score=131.58 Aligned_cols=100 Identities=20% Similarity=0.262 Sum_probs=97.5
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHH
Q 014484 317 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 396 (423)
Q Consensus 317 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~ 396 (423)
.+..+...|..++..|+|++|+..|+++++++|. +..+|.++|.++.++|++++|+.+++++++++|+++.+|+++|.+
T Consensus 3 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~ 81 (126)
T 3upv_A 3 KAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPE-DARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATA 81 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 4567889999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhccc
Q 014484 397 LFSLGMENDARETLKDGTNLE 417 (423)
Q Consensus 397 ~~~~~~~~~A~~~~~~al~l~ 417 (423)
+..+|++++|+..|+++++++
T Consensus 82 ~~~~~~~~~A~~~~~~al~~~ 102 (126)
T 3upv_A 82 QIAVKEYASALETLDAARTKD 102 (126)
T ss_dssp HHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHhCHHHHHHHHHHHHHhC
Confidence 999999999999999999999
|
| >3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.8e-16 Score=132.86 Aligned_cols=105 Identities=27% Similarity=0.365 Sum_probs=100.9
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHH
Q 014484 316 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAA 395 (423)
Q Consensus 316 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~ 395 (423)
..+..+...|..++..|+|++|+..|+++++++|. +..+|+++|.+|..+|+|++|+.+++++++++|+++.+|+++|.
T Consensus 9 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~ 87 (164)
T 3sz7_A 9 PESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPA-NPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLGL 87 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 45667888999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhccccccC
Q 014484 396 CLFSLGMENDARETLKDGTNLEAKKN 421 (423)
Q Consensus 396 ~~~~~~~~~~A~~~~~~al~l~~~~~ 421 (423)
+|..+|++++|++.|+++++++|...
T Consensus 88 ~~~~~g~~~~A~~~~~~al~~~p~~~ 113 (164)
T 3sz7_A 88 ARFDMADYKGAKEAYEKGIEAEGNGG 113 (164)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHSSSC
T ss_pred HHHHccCHHHHHHHHHHHHHhCCCch
Confidence 99999999999999999999999764
|
| >2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=1.7e-16 Score=130.74 Aligned_cols=103 Identities=12% Similarity=0.054 Sum_probs=98.4
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHH
Q 014484 317 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 396 (423)
Q Consensus 317 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~ 396 (423)
....+...|..++..|+|++|+..|+++++++|. +..+|+++|.++..+|++++|+..|++|++++|+++.+|+++|.+
T Consensus 20 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~ 98 (148)
T 2vgx_A 20 TLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHY-DSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRFPFHAAEC 98 (148)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHHHH
Confidence 4456778999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhcccccc
Q 014484 397 LFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 397 ~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
|..+|++++|++.|+++++++|.+
T Consensus 99 ~~~~g~~~~A~~~~~~al~~~p~~ 122 (148)
T 2vgx_A 99 LLQXGELAEAESGLFLAQELIANX 122 (148)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHTTC
T ss_pred HHHcCCHHHHHHHHHHHHHHCcCC
Confidence 999999999999999999998863
|
| >4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=1.6e-16 Score=131.31 Aligned_cols=103 Identities=12% Similarity=0.120 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHH
Q 014484 317 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 396 (423)
Q Consensus 317 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~ 396 (423)
....++..|..+++.|+|++|++.|+++|+++|+ ++.+|+++|.+|..+|++++|+..|++|++++|+++.+|+++|.+
T Consensus 30 ~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~ 108 (150)
T 4ga2_A 30 KSIKGFYFAKLYYEAKEYDLAKKYICTYINVQER-DPKAHRFLGLLYELEENTDKAVECYRRSVELNPTQKDLVLKIAEL 108 (150)
T ss_dssp HHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 3445677899999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHH-HHhhcccccc
Q 014484 397 LFSLGMENDARETL-KDGTNLEAKK 420 (423)
Q Consensus 397 ~~~~~~~~~A~~~~-~~al~l~~~~ 420 (423)
|..+|++++|++.| ++|++++|.+
T Consensus 109 ~~~~~~~~~aa~~~~~~al~l~P~~ 133 (150)
T 4ga2_A 109 LCKNDVTDGRAKYWVERAAKLFPGS 133 (150)
T ss_dssp HHHHCSSSSHHHHHHHHHHHHSTTC
T ss_pred HHHcCChHHHHHHHHHHHHHhCcCC
Confidence 99999999888765 9999999975
|
| >1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.68 E-value=1.6e-16 Score=126.13 Aligned_cols=101 Identities=12% Similarity=0.040 Sum_probs=92.9
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHh
Q 014484 320 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFS 399 (423)
Q Consensus 320 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~ 399 (423)
.+...|..+++.|++++|+..|+++++.+|+ +..+|+++|.++..+|++++|+..+++|++++|+++.+++.+|.++..
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~ 97 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQKEPE-REEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTN 97 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 4677899999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHhhccccccC
Q 014484 400 LGMENDARETLKDGTNLEAKKN 421 (423)
Q Consensus 400 ~~~~~~A~~~~~~al~l~~~~~ 421 (423)
+|++++|+..|+++++++|...
T Consensus 98 ~g~~~~A~~~~~~al~~~P~~~ 119 (121)
T 1hxi_A 98 EHNANAALASLRAWLLSQPQYE 119 (121)
T ss_dssp HHHHHHHHHHHHHHHC------
T ss_pred cCCHHHHHHHHHHHHHhCcCCC
Confidence 9999999999999999999753
|
| >2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A | Back alignment and structure |
|---|
Probab=99.68 E-value=3.7e-16 Score=127.62 Aligned_cols=103 Identities=13% Similarity=0.107 Sum_probs=98.3
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHH
Q 014484 317 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 396 (423)
Q Consensus 317 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~ 396 (423)
....+...|..++..|+|++|+..|+++++.+|. +..+|+++|.++..+|++++|+..|++|+.++|+++.+++++|.+
T Consensus 17 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~ 95 (142)
T 2xcb_A 17 TLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHY-DARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHAAEC 95 (142)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHH
Confidence 3456778899999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhcccccc
Q 014484 397 LFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 397 ~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
|..+|++++|++.|+++++++|.+
T Consensus 96 ~~~~g~~~~A~~~~~~al~~~p~~ 119 (142)
T 2xcb_A 96 HLQLGDLDGAESGFYSARALAAAQ 119 (142)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHTC
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999998854
|
| >3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B* | Back alignment and structure |
|---|
Probab=99.63 E-value=2.4e-15 Score=121.44 Aligned_cols=102 Identities=22% Similarity=0.406 Sum_probs=98.5
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHH
Q 014484 317 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 396 (423)
Q Consensus 317 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~ 396 (423)
.+..+...|..++..|+|++|+..|+++++.+|. +..+++++|.++..+|++++|+..++++++++|+++.+|+++|.+
T Consensus 8 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 86 (137)
T 3q49_B 8 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQC 86 (137)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcC-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHHH
Confidence 3557788999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhccccc
Q 014484 397 LFSLGMENDARETLKDGTNLEAK 419 (423)
Q Consensus 397 ~~~~~~~~~A~~~~~~al~l~~~ 419 (423)
+..+|++++|+..|+++++++|.
T Consensus 87 ~~~~~~~~~A~~~~~~a~~~~p~ 109 (137)
T 3q49_B 87 QLEMESYDEAIANLQRAYSLAKE 109 (137)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHHHHHHHHChh
Confidence 99999999999999999999987
|
| >3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.61 E-value=2e-15 Score=131.82 Aligned_cols=102 Identities=20% Similarity=0.090 Sum_probs=95.7
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhh----------------HHHHHHhcCChHHHHHHHHHhHh
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYAR----------------RCLSYLMNDMPQEALGDAMQAQV 381 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~----------------~~~~~~~~~~~~~A~~~~~~a~~ 381 (423)
+..+..+|..++..|+|++|+..|+++++++|+ +..+|+. +|.+|.++|++++|+..|+++++
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 82 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIALNID-RTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQ 82 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHH-HHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-ChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 456778999999999999999999999999999 9999999 99999999999999999999999
Q ss_pred cCCCchHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 014484 382 VSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 382 l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
++|+++.+|+++|.++..+|++++|+..|+++++++|.+
T Consensus 83 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~ 121 (208)
T 3urz_A 83 KAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADN 121 (208)
T ss_dssp HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC
T ss_pred HCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC
Confidence 999999999999999999999999999999999999874
|
| >1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.60 E-value=4.6e-16 Score=127.06 Aligned_cols=90 Identities=13% Similarity=0.064 Sum_probs=84.7
Q ss_pred hcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCCh----------HHHHHHHHHhHhcCCCchHHHHHHHHHHHh
Q 014484 330 RAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMP----------QEALGDAMQAQVVSPDWPTALYLQAACLFS 399 (423)
Q Consensus 330 ~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~----------~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~ 399 (423)
+.+.|++|++.|+++++++|+ ++.+|+++|.++..++++ ++|+..|++||+++|+++.+|+++|.+|..
T Consensus 14 r~~~feeA~~~~~~Ai~l~P~-~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~ 92 (158)
T 1zu2_A 14 RILLFEQIRQDAENTYKSNPL-DADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTS 92 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHH
Confidence 446789999999999999999 999999999999999876 499999999999999999999999999999
Q ss_pred CC-----------ChHHHHHHHHHhhcccccc
Q 014484 400 LG-----------MENDARETLKDGTNLEAKK 420 (423)
Q Consensus 400 ~~-----------~~~~A~~~~~~al~l~~~~ 420 (423)
+| ++++|+++|++|++++|.+
T Consensus 93 lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~ 124 (158)
T 1zu2_A 93 FAFLTPDETEAKHNFDLATQFFQQAVDEQPDN 124 (158)
T ss_dssp HHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred hcccCcchhhhhccHHHHHHHHHHHHHhCCCC
Confidence 85 8999999999999999974
|
| >1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.59 E-value=1.3e-14 Score=113.15 Aligned_cols=103 Identities=24% Similarity=0.390 Sum_probs=98.7
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHH
Q 014484 317 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 396 (423)
Q Consensus 317 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~ 396 (423)
.+..+...|..++..|++++|+..|+++++.+|. +..++.++|.++...|++++|+..++++++++|+++.+++.+|.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~ 81 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPH-NHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAA 81 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHH
Confidence 4556788999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhcccccc
Q 014484 397 LFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 397 ~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
+..+|++++|++.|+++++++|..
T Consensus 82 ~~~~~~~~~A~~~~~~~~~~~~~~ 105 (118)
T 1elw_A 82 LEFLNRFEEAKRTYEEGLKHEANN 105 (118)
T ss_dssp HHHTTCHHHHHHHHHHHHTTCTTC
T ss_pred HHHHhhHHHHHHHHHHHHHcCCCC
Confidence 999999999999999999998864
|
| >2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.59 E-value=1e-14 Score=125.97 Aligned_cols=106 Identities=19% Similarity=0.261 Sum_probs=100.0
Q ss_pred hHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcH----------------HHHhhHHHHHHhcCChHHHHHHHH
Q 014484 314 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSP----------------TVYARRCLSYLMNDMPQEALGDAM 377 (423)
Q Consensus 314 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~----------------~~~~~~~~~~~~~~~~~~A~~~~~ 377 (423)
....+..+...|..++..|+|++|+..|.+++++.|. +. .++.++|.+|..+|+|++|+.+++
T Consensus 34 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~ 112 (198)
T 2fbn_A 34 KVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIH-TEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHAS 112 (198)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTT-CTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhc-ccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 3456668889999999999999999999999999998 66 899999999999999999999999
Q ss_pred HhHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 014484 378 QAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 378 ~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
++++++|+++.+++++|.+|..+|++++|++.|+++++++|..
T Consensus 113 ~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~ 155 (198)
T 2fbn_A 113 KVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNN 155 (198)
T ss_dssp HHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCc
Confidence 9999999999999999999999999999999999999999864
|
| >1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A | Back alignment and structure |
|---|
Probab=99.58 E-value=1e-14 Score=143.03 Aligned_cols=106 Identities=12% Similarity=0.174 Sum_probs=98.0
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCc---------------HHHHhhHHHHHHhcCChHHHHHHHHHh
Q 014484 315 MQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVS---------------PTVYARRCLSYLMNDMPQEALGDAMQA 379 (423)
Q Consensus 315 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---------------~~~~~~~~~~~~~~~~~~~A~~~~~~a 379 (423)
...+..++.+|+.+++.|+|++|+..|++|++++|. + ..+|+|+|.||.++|+|++|+.+|++|
T Consensus 265 ~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~a 343 (457)
T 1kt0_A 265 LEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEM-EYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKA 343 (457)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTT-CCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcc-cccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 345668889999999999999999999999999999 6 699999999999999999999999999
Q ss_pred HhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHhhccccccC
Q 014484 380 QVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKKN 421 (423)
Q Consensus 380 ~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 421 (423)
++++|+++.+|+++|.+|..+|+|++|+.+|++|++++|.+.
T Consensus 344 l~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~ 385 (457)
T 1kt0_A 344 LGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNK 385 (457)
T ss_dssp HHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----
T ss_pred HhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCH
Confidence 999999999999999999999999999999999999999753
|
| >1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A | Back alignment and structure |
|---|
Probab=99.58 E-value=1.3e-14 Score=136.30 Aligned_cols=105 Identities=11% Similarity=0.101 Sum_probs=99.9
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCc---------------HHHHhhHHHHHHhcCChHHHHHHHHHh
Q 014484 315 MQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVS---------------PTVYARRCLSYLMNDMPQEALGDAMQA 379 (423)
Q Consensus 315 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---------------~~~~~~~~~~~~~~~~~~~A~~~~~~a 379 (423)
...+..+...|+.+++.|+|++|+..|++|++++|. + ..+|+++|.||.++|+|++|+.+|++|
T Consensus 144 p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~a 222 (336)
T 1p5q_A 144 LEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEY-ESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKA 222 (336)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTT-CCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhc-cccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 345667889999999999999999999999999999 7 699999999999999999999999999
Q ss_pred HhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 014484 380 QVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 380 ~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
++++|+++.+|+++|.+|..+|++++|+.+|++|++++|..
T Consensus 223 l~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~ 263 (336)
T 1p5q_A 223 LELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNN 263 (336)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSC
T ss_pred HHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
Confidence 99999999999999999999999999999999999999874
|
| >2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.58 E-value=2.1e-14 Score=114.69 Aligned_cols=102 Identities=22% Similarity=0.290 Sum_probs=98.0
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHH
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 397 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 397 (423)
...+...|..++..|++++|+..|+++++.+|. +..++.++|.++...|++++|+..++++++++|+++.+++++|.++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~ 94 (133)
T 2lni_A 16 ALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPK-DAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAAL 94 (133)
T ss_dssp HHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTT-CHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHHHH
Confidence 456778899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHhhcccccc
Q 014484 398 FSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 398 ~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
..+|++++|++.|+++++++|..
T Consensus 95 ~~~~~~~~A~~~~~~~~~~~p~~ 117 (133)
T 2lni_A 95 EAMKDYTKAMDVYQKALDLDSSC 117 (133)
T ss_dssp HHTTCHHHHHHHHHHHHHHCGGG
T ss_pred HHHhhHHHHHHHHHHHHHhCCCc
Confidence 99999999999999999998874
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=1.1e-14 Score=149.76 Aligned_cols=102 Identities=14% Similarity=0.047 Sum_probs=85.4
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHH
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 397 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 397 (423)
+..+...|..+.+.|++++|+..|++||+++|+ +..+|+++|.+|.++|++++|++.|++|++++|+++.+|+++|.+|
T Consensus 43 ~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~-~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~ 121 (723)
T 4gyw_A 43 AAAHSNLASVLQQQGKLQEALMHYKEAIRISPT-FADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIH 121 (723)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 446667888888888888888888888888888 8888888888888888888888888888888888888888888888
Q ss_pred HhCCChHHHHHHHHHhhcccccc
Q 014484 398 FSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 398 ~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
..+|++++|++.|++|++++|..
T Consensus 122 ~~~g~~~eAi~~~~~Al~l~P~~ 144 (723)
T 4gyw_A 122 KDSGNIPEAIASYRTALKLKPDF 144 (723)
T ss_dssp HHTTCHHHHHHHHHHHHHHCSCC
T ss_pred HHcCCHHHHHHHHHHHHHhCCCC
Confidence 88888888888888888888763
|
| >4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=1.4e-15 Score=125.60 Aligned_cols=96 Identities=11% Similarity=-0.083 Sum_probs=89.7
Q ss_pred HHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHhCCCh
Q 014484 324 HGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGME 403 (423)
Q Consensus 324 ~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~ 403 (423)
.|..+..+|++++|+..|.+++..+|+ ++.+++++|.+|.++|+|++|+..+++|++++|+++.+|+++|.+|..+|++
T Consensus 3 LG~~~~~~~~~e~ai~~~~~a~~~~p~-~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~ 81 (150)
T 4ga2_A 3 LGSMRRSKADVERYIASVQGSTPSPRQ-KSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENT 81 (150)
T ss_dssp ----CCCHHHHHHHHHHHHHHSCSHHH-HHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred hHHHHHHcChHHHHHHHHHHhcccCcc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCch
Confidence 467778889999999999999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccccc
Q 014484 404 NDARETLKDGTNLEAKK 420 (423)
Q Consensus 404 ~~A~~~~~~al~l~~~~ 420 (423)
++|+..|++|++++|..
T Consensus 82 ~~A~~~~~~al~~~p~~ 98 (150)
T 4ga2_A 82 DKAVECYRRSVELNPTQ 98 (150)
T ss_dssp HHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHhCCCC
Confidence 99999999999999974
|
| >2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2 | Back alignment and structure |
|---|
Probab=99.57 E-value=1.3e-14 Score=132.72 Aligned_cols=102 Identities=22% Similarity=0.411 Sum_probs=98.5
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHH
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 397 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 397 (423)
+..+...|+.++..|+|++|+..|++|++.+|. +..+|+++|.+|..+|++++|+.++++|++++|+++.+++++|.+|
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~ 82 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQ 82 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 456788999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHhhcccccc
Q 014484 398 FSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 398 ~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
..+|++++|+..|++|++++|..
T Consensus 83 ~~~g~~~~A~~~~~~al~l~p~~ 105 (281)
T 2c2l_A 83 LEMESYDEAIANLQRAYSLAKEQ 105 (281)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHcCCHHHHHHHHHHHHHhCccc
Confidence 99999999999999999999865
|
| >2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ... | Back alignment and structure |
|---|
Probab=99.56 E-value=1.5e-14 Score=138.06 Aligned_cols=98 Identities=14% Similarity=-0.023 Sum_probs=56.1
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCC-hHHHHHHHHHhHhcCCCchHHHHHHHHHHHh
Q 014484 321 SKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDM-PQEALGDAMQAQVVSPDWPTALYLQAACLFS 399 (423)
Q Consensus 321 ~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~-~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~ 399 (423)
+...|..+...|++++|+..|+++|+++|+ +..+|+++|.++..+|+ +++|+.++++|++++|+++.+|+++|.++..
T Consensus 100 ~~~lg~~~~~~g~~~~Al~~~~~al~l~P~-~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~ 178 (382)
T 2h6f_A 100 YDYFRAVLQRDERSERAFKLTRDAIELNAA-NYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEW 178 (382)
T ss_dssp HHHHHHHHHHTCCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCChHHHHHHHHHHHHhCcc-CHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Confidence 344555555555555555555555555555 55555555555555554 5555555555555555555555555555555
Q ss_pred CCChHHHHHHHHHhhccccc
Q 014484 400 LGMENDARETLKDGTNLEAK 419 (423)
Q Consensus 400 ~~~~~~A~~~~~~al~l~~~ 419 (423)
+|++++|+..|++|++++|.
T Consensus 179 ~g~~~eAl~~~~kal~ldP~ 198 (382)
T 2h6f_A 179 LRDPSQELEFIADILNQDAK 198 (382)
T ss_dssp HTCCTTHHHHHHHHHHHCTT
T ss_pred ccCHHHHHHHHHHHHHhCcc
Confidence 55555555555555555554
|
| >3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A | Back alignment and structure |
|---|
Probab=99.55 E-value=3.1e-14 Score=121.13 Aligned_cols=101 Identities=19% Similarity=0.170 Sum_probs=96.5
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHH
Q 014484 319 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLF 398 (423)
Q Consensus 319 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~ 398 (423)
..+...|..+...+++++|+..+.++++++|. +..++..+|.+|.++|++++|+..++++++++|+++.+|+++|.+|.
T Consensus 74 ~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~-~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~ 152 (184)
T 3vtx_A 74 EAYYILGSANFMIDEKQAAIDALQRAIALNTV-YADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYE 152 (184)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-chHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHH
Confidence 34556789999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred hCCChHHHHHHHHHhhcccccc
Q 014484 399 SLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 399 ~~~~~~~A~~~~~~al~l~~~~ 420 (423)
.+|++++|++.|++|++++|++
T Consensus 153 ~~g~~~~A~~~~~~al~~~p~~ 174 (184)
T 3vtx_A 153 GKGLRDEAVKYFKKALEKEEKK 174 (184)
T ss_dssp HTTCHHHHHHHHHHHHHTTHHH
T ss_pred HCCCHHHHHHHHHHHHhCCccC
Confidence 9999999999999999999974
|
| >2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.55 E-value=3.5e-14 Score=115.73 Aligned_cols=102 Identities=24% Similarity=0.241 Sum_probs=97.4
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCc---HHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHH
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVS---PTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQA 394 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g 394 (423)
+..+...|..++..|+|++|+..|+++++.+|+ + ..++.++|.+|..+|++++|+..++++++++|+++.+++++|
T Consensus 28 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a 106 (148)
T 2dba_A 28 VEQLRKEGNELFKCGDYGGALAAYTQALGLDAT-PQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRRS 106 (148)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCC-HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHccc-chHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHHHH
Confidence 456678899999999999999999999999998 7 899999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHHHHHHHHHhhcccccc
Q 014484 395 ACLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 395 ~~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
.++..+|++++|+..|+++++++|.+
T Consensus 107 ~~~~~~~~~~~A~~~~~~al~~~p~~ 132 (148)
T 2dba_A 107 QALEKLGRLDQAVLDLQRCVSLEPKN 132 (148)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHCSSC
T ss_pred HHHHHcCCHHHHHHHHHHHHHcCCCc
Confidence 99999999999999999999999864
|
| >1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A | Back alignment and structure |
|---|
Probab=99.55 E-value=1.5e-14 Score=137.71 Aligned_cols=109 Identities=19% Similarity=0.200 Sum_probs=102.1
Q ss_pred hhhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhc----------------CCCCCcHHHHhhHHHHHHhcCChHHHHH
Q 014484 311 WTSQMQETLNSKKHGDTAFRAKDFSTAIDCYTQFID----------------GGTMVSPTVYARRCLSYLMNDMPQEALG 374 (423)
Q Consensus 311 ~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~----------------~~p~~~~~~~~~~~~~~~~~~~~~~A~~ 374 (423)
.......+..++..|+.+++.|+|++|+..|++|++ ++|. +..+|+++|.||.++|+|++|+.
T Consensus 216 ~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~-~~~~~~nla~~~~~~g~~~~A~~ 294 (370)
T 1ihg_A 216 VDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPV-ALSCVLNIGACKLKMSDWQGAVD 294 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHH-HHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHH-HHHHHHHHHHHHHhccCHHHHHH
Confidence 344456677889999999999999999999999998 7888 89999999999999999999999
Q ss_pred HHHHhHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 014484 375 DAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 375 ~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
++++|++++|+++.+|+++|.+|..+|++++|+++|++|++++|.+
T Consensus 295 ~~~~al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~ 340 (370)
T 1ihg_A 295 SCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPED 340 (370)
T ss_dssp HHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHhCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999999999999999999999864
|
| >1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A | Back alignment and structure |
|---|
Probab=99.55 E-value=5.3e-14 Score=117.05 Aligned_cols=106 Identities=25% Similarity=0.370 Sum_probs=100.7
Q ss_pred hHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHH
Q 014484 314 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQ 393 (423)
Q Consensus 314 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~ 393 (423)
....+..+...|..++..|+|++|+..|.++++.+|. +..++.++|.++..+|++++|+..++++++++|+++.+|+++
T Consensus 9 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~ 87 (166)
T 1a17_A 9 ALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRR 87 (166)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHH
Confidence 3456778889999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHHHHHHHHHhhcccccc
Q 014484 394 AACLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 394 g~~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
|.++..+|++++|+..|+++++++|..
T Consensus 88 a~~~~~~~~~~~A~~~~~~a~~~~p~~ 114 (166)
T 1a17_A 88 AASNMALGKFRAALRDYETVVKVKPHD 114 (166)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHhccHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999998864
|
| >2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=99.55 E-value=4.4e-14 Score=112.57 Aligned_cols=100 Identities=13% Similarity=0.063 Sum_probs=94.6
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcH---HHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCc---hHHHHHH
Q 014484 320 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSP---TVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW---PTALYLQ 393 (423)
Q Consensus 320 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~---~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~---~~a~~~~ 393 (423)
.+...|..++..|+|++|+..|+++++.+|+ +. .+++++|.++...|++++|+..++++++.+|++ +.+++.+
T Consensus 4 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~l 82 (129)
T 2xev_A 4 TAYNVAFDALKNGKYDDASQLFLSFLELYPN-GVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKL 82 (129)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHCSS-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHCCC-CcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHH
Confidence 3567899999999999999999999999998 77 799999999999999999999999999999999 8999999
Q ss_pred HHHHHhCCChHHHHHHHHHhhcccccc
Q 014484 394 AACLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 394 g~~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
|.++..+|++++|+..|+++++.+|..
T Consensus 83 a~~~~~~g~~~~A~~~~~~~~~~~p~~ 109 (129)
T 2xev_A 83 GLSQYGEGKNTEAQQTLQQVATQYPGS 109 (129)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTS
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHCCCC
Confidence 999999999999999999999998863
|
| >2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.54 E-value=1.6e-14 Score=135.94 Aligned_cols=107 Identities=15% Similarity=0.184 Sum_probs=96.5
Q ss_pred hhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcH-----------------HHHhhHHHHHHhcCChHHHHHH
Q 014484 313 SQMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSP-----------------TVYARRCLSYLMNDMPQEALGD 375 (423)
Q Consensus 313 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~-----------------~~~~~~~~~~~~~~~~~~A~~~ 375 (423)
.....+..++..|+.+++.|+|++|+..|++|++++|. +. .+|+++|.||.++|+|++|+.+
T Consensus 174 ~~~~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~ 252 (338)
T 2if4_A 174 ERIGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGD-DFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGH 252 (338)
T ss_dssp HHHHHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCH-HHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcc-chhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 34456678899999999999999999999999999998 66 4999999999999999999999
Q ss_pred HHHhHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 014484 376 AMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 376 ~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
|++|++++|+++.+|+++|.+|..+|+|++|+.+|++|++++|.+
T Consensus 253 ~~~al~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~ 297 (338)
T 2if4_A 253 CNIVLTEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDD 297 (338)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC-----
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCC
Confidence 999999999999999999999999999999999999999999875
|
| >2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=99.54 E-value=5.1e-14 Score=108.69 Aligned_cols=100 Identities=14% Similarity=0.064 Sum_probs=95.8
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCC--chHHHHHHHHHH
Q 014484 320 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPD--WPTALYLQAACL 397 (423)
Q Consensus 320 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~--~~~a~~~~g~~~ 397 (423)
.+...|..++..|++++|+..|+++++++|. +..++.++|.++..+|++++|+..++++++++|+ +..+++.+|.++
T Consensus 8 ~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~~~ 86 (112)
T 2kck_A 8 EYYLEGVLQYDAGNYTESIDLFEKAIQLDPE-ESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKADAL 86 (112)
T ss_dssp GGGGHHHHHHSSCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhCcC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHHHHHHH
Confidence 4566899999999999999999999999999 9999999999999999999999999999999999 999999999999
Q ss_pred HhC-CChHHHHHHHHHhhcccccc
Q 014484 398 FSL-GMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 398 ~~~-~~~~~A~~~~~~al~l~~~~ 420 (423)
..+ |++++|++.|+++++.+|..
T Consensus 87 ~~~~~~~~~A~~~~~~~~~~~p~~ 110 (112)
T 2kck_A 87 RYIEGKEVEAEIAEARAKLEHHHH 110 (112)
T ss_dssp TTCSSCSHHHHHHHHHHGGGCCCC
T ss_pred HHHhCCHHHHHHHHHHHhhcccCC
Confidence 999 99999999999999998864
|
| >2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.54 E-value=2.6e-14 Score=125.58 Aligned_cols=101 Identities=14% Similarity=0.213 Sum_probs=97.4
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHH
Q 014484 319 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLF 398 (423)
Q Consensus 319 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~ 398 (423)
..+...|..+++.|++++|+..|+++++.+|+ +..+++++|.++..+|++++|+..++++++++|+++.+++++|.++.
T Consensus 6 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~ 84 (217)
T 2pl2_A 6 QNPLRLGVQLYALGRYDAALTLFERALKENPQ-DPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAYV 84 (217)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSS-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 45677899999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred hC-----------CChHHHHHHHHHhhcccccc
Q 014484 399 SL-----------GMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 399 ~~-----------~~~~~A~~~~~~al~l~~~~ 420 (423)
.+ |++++|+..|+++++++|..
T Consensus 85 ~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~ 117 (217)
T 2pl2_A 85 ALYRQAEDRERGKGYLEQALSVLKDAERVNPRY 117 (217)
T ss_dssp HHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred HhhhhhhhhcccccCHHHHHHHHHHHHHhCccc
Confidence 99 99999999999999999964
|
| >3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.53 E-value=5.6e-15 Score=116.25 Aligned_cols=90 Identities=14% Similarity=0.057 Sum_probs=82.2
Q ss_pred hcCCHHHHHHHHHHHhcC---CCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHhCCChHHH
Q 014484 330 RAKDFSTAIDCYTQFIDG---GTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDA 406 (423)
Q Consensus 330 ~~~~~~~A~~~~~~ai~~---~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A 406 (423)
..|++++|+..|++++++ +|. +..++.++|.+|..+|+|++|+..++++++++|+++.+++++|.++..+|++++|
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A 80 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKD-LAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQG 80 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCcc-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHH
Confidence 468999999999999999 688 8999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccccc
Q 014484 407 RETLKDGTNLEAKK 420 (423)
Q Consensus 407 ~~~~~~al~l~~~~ 420 (423)
+..|+++++++|..
T Consensus 81 ~~~~~~al~~~p~~ 94 (117)
T 3k9i_A 81 VELLLKIIAETSDD 94 (117)
T ss_dssp HHHHHHHHHHHCCC
T ss_pred HHHHHHHHHhCCCc
Confidence 99999999998764
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=99.53 E-value=9e-15 Score=137.66 Aligned_cols=127 Identities=11% Similarity=0.072 Sum_probs=89.7
Q ss_pred CCCCccceeeee-cceeeeeecCCChh---------------h--------HHHHHHHHHHHhcCCCCCccceEeEEEeC
Q 014484 2 GGRCSKFSICWF-HCHLKSSVLESSDL---------------G--------ETLNLEEAKAVGNLRSERLANLIGCCYEA 57 (423)
Q Consensus 2 G~~g~v~~~~~~-~~~~~~~~~~~~~~---------------~--------~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 57 (423)
|++|.||.+... +..+++|++..... . .-...+|...|.++.+.++....-+...
T Consensus 106 Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~vp~p~~~~- 184 (397)
T 4gyi_A 106 GKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFPVPEPIAQS- 184 (397)
T ss_dssp CSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCCEEEEE-
T ss_pred CCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeecc-
Confidence 999999999874 77888887532110 0 0112457777777754443222112122
Q ss_pred CceeEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCC----------e
Q 014484 58 DERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGN----------P 127 (423)
Q Consensus 58 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~----------~ 127 (423)
..++||||++|++|.++.. .+....++.|++.+|.+||++| ||||||||.|||++++|. +
T Consensus 185 -~~~LVME~i~G~~L~~l~~--------~~~~~~l~~qll~~l~~lH~~g-IVHrDLKp~NILl~~dgd~~d~~~~~~~~ 254 (397)
T 4gyi_A 185 -RHTIVMSLVDALPMRQVSS--------VPDPASLYADLIALILRLAKHG-LIHGDFNEFNILIREEKDAEDPSSITLTP 254 (397)
T ss_dssp -TTEEEEECCSCEEGGGCCC--------CSCHHHHHHHHHHHHHHHHHTT-EECSCCSTTSEEEEEEECSSCTTSEEEEE
T ss_pred -CceEEEEecCCccHhhhcc--------cHHHHHHHHHHHHHHHHHHHCC-CcCCCCCHHHEEEeCCCCcccccccccce
Confidence 2479999999999876542 1234578899999999999999 999999999999987763 8
Q ss_pred EEccccccccCC
Q 014484 128 RLSSFGLMKNSR 139 (423)
Q Consensus 128 kl~Dfg~~~~~~ 139 (423)
.|+||+.+....
T Consensus 255 ~iID~~Q~V~~~ 266 (397)
T 4gyi_A 255 IIIXFPQMVSMD 266 (397)
T ss_dssp EECCCTTCEETT
T ss_pred EEEEeCCcccCC
Confidence 899999876543
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=3.7e-14 Score=145.78 Aligned_cols=101 Identities=22% Similarity=0.196 Sum_probs=74.3
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHH
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 397 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 397 (423)
+..+...|+.+...|++++|++.|++||+++|+ +..+|+++|.+|.++|++++|+..|++|++++|+++.+|+++|.+|
T Consensus 77 ~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~-~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~~l 155 (723)
T 4gyw_A 77 ADAYSNMGNTLKEMQDVQGALQCYTRAIQINPA-FADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCL 155 (723)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHhhhhhHH
Confidence 345666777777777777777777777777777 7777777777777777777777777777777777777777777777
Q ss_pred HhCCChHHHHHHHHHhhccccc
Q 014484 398 FSLGMENDARETLKDGTNLEAK 419 (423)
Q Consensus 398 ~~~~~~~~A~~~~~~al~l~~~ 419 (423)
..+|++++|++.|++++++.+.
T Consensus 156 ~~~g~~~~A~~~~~kal~l~~~ 177 (723)
T 4gyw_A 156 QIVCDWTDYDERMKKLVSIVAD 177 (723)
T ss_dssp HHTTCCTTHHHHHHHHHHHHHH
T ss_pred HhcccHHHHHHHHHHHHHhChh
Confidence 7777777777777777766654
|
| >4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.53 E-value=5.9e-14 Score=123.82 Aligned_cols=102 Identities=15% Similarity=0.099 Sum_probs=97.7
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCC-CCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHH
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGT-MVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 396 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p-~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~ 396 (423)
...+...|..++..|+|++|+..|+++++++| . +..+++++|.++..+|++++|+..++++++++|+++.+|+.+|.+
T Consensus 7 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 85 (228)
T 4i17_A 7 PNQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQ-DSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAA 85 (228)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhccCCC-CcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHHH
Confidence 35778899999999999999999999999999 7 889999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhcccccc
Q 014484 397 LFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 397 ~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
+..+|++++|++.|+++++++|.+
T Consensus 86 ~~~~~~~~~A~~~~~~al~~~p~~ 109 (228)
T 4i17_A 86 YRDMKNNQEYIATLTEGIKAVPGN 109 (228)
T ss_dssp HHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHcccHHHHHHHHHHHHHHCCCc
Confidence 999999999999999999999874
|
| >2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.52 E-value=1.5e-13 Score=109.04 Aligned_cols=104 Identities=19% Similarity=0.269 Sum_probs=99.0
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHH
Q 014484 316 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAA 395 (423)
Q Consensus 316 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~ 395 (423)
.....+...|..++..|++++|+..|+++++.+|. +..++.++|.++...|++++|+..++++++++|+++.+++.+|.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~ 88 (131)
T 2vyi_A 10 AEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPA-NAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGL 88 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHHH
Confidence 34567788999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhcccccc
Q 014484 396 CLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 396 ~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
++..+|++++|+..|+++++++|..
T Consensus 89 ~~~~~~~~~~A~~~~~~~~~~~p~~ 113 (131)
T 2vyi_A 89 ALSSLNKHVEAVAYYKKALELDPDN 113 (131)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHhCCHHHHHHHHHHHHhcCccc
Confidence 9999999999999999999998864
|
| >3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.52 E-value=8.7e-14 Score=121.31 Aligned_cols=96 Identities=9% Similarity=0.020 Sum_probs=90.0
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHhC--
Q 014484 323 KHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSL-- 400 (423)
Q Consensus 323 ~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~-- 400 (423)
..|..++..|++++|+..|+++++++|+ +..+++++|.++..+|++++|+..|+++++++|+++.+|+++|.+|+.+
T Consensus 59 ~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~ 137 (208)
T 3urz_A 59 ELALAYKKNRNYDKAYLFYKELLQKAPN-NVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAE 137 (208)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhH
Confidence 3899999999999999999999999999 9999999999999999999999999999999999999999988877543
Q ss_pred ---------------------------------CChHHHHHHHHHhhccccc
Q 014484 401 ---------------------------------GMENDARETLKDGTNLEAK 419 (423)
Q Consensus 401 ---------------------------------~~~~~A~~~~~~al~l~~~ 419 (423)
|+|++|+.+|++|++++|.
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P~ 189 (208)
T 3urz_A 138 QEKKKLETDYKKLSSPTKMQYARYRDGLSKLFTTRYEKARNSLQKVILRFPS 189 (208)
T ss_dssp HHHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSCC
T ss_pred HHHHHHHHHHHHHhCCCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC
Confidence 4688999999999999996
|
| >2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ... | Back alignment and structure |
|---|
Probab=99.52 E-value=2.7e-14 Score=136.17 Aligned_cols=102 Identities=7% Similarity=-0.051 Sum_probs=91.4
Q ss_pred HHHHHHHHHHHHhcCC-HHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHH
Q 014484 318 TLNSKKHGDTAFRAKD-FSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 396 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~-~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~ 396 (423)
...+..+|..+...|+ +++|+..|+++|+++|+ +..+|+++|.++..+|++++|+.+|++||+++|+++.+|+++|.+
T Consensus 131 ~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~-~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~ 209 (382)
T 2h6f_A 131 YTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPK-NYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWV 209 (382)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHH
Confidence 3466778899999996 99999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhcccccc
Q 014484 397 LFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 397 ~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
+..+|++++|+++|+++++++|.+
T Consensus 210 ~~~~g~~~eAl~~~~~al~l~P~~ 233 (382)
T 2h6f_A 210 IQEFKLWDNELQYVDQLLKEDVRN 233 (382)
T ss_dssp HHHHTCCTTHHHHHHHHHHHCTTC
T ss_pred HHHcCChHHHHHHHHHHHHhCCCC
Confidence 999999999999999999998864
|
| >1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A | Back alignment and structure |
|---|
Probab=99.50 E-value=1.3e-13 Score=109.50 Aligned_cols=102 Identities=18% Similarity=0.162 Sum_probs=96.6
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCc-------hHH
Q 014484 317 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW-------PTA 389 (423)
Q Consensus 317 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~-------~~a 389 (423)
.+..+...|..++..|++++|+..|+++++.+|. +..++.++|.++...|++++|+..+++++.++|++ +.+
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~ 81 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKELDPT-NMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKA 81 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCc-cHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHH
Confidence 3456778999999999999999999999999999 99999999999999999999999999999999887 999
Q ss_pred HHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 014484 390 LYLQAACLFSLGMENDARETLKDGTNLEAK 419 (423)
Q Consensus 390 ~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 419 (423)
++++|.++..+|++++|++.|+++++++|.
T Consensus 82 ~~~la~~~~~~~~~~~A~~~~~~~~~~~~~ 111 (131)
T 1elr_A 82 YARIGNSYFKEEKYKDAIHFYNKSLAEHRT 111 (131)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHhCCC
Confidence 999999999999999999999999998774
|
| >2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.49 E-value=1.2e-13 Score=121.22 Aligned_cols=98 Identities=14% Similarity=0.071 Sum_probs=68.3
Q ss_pred HHHHHHHHHHhc-----------CCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchH
Q 014484 320 NSKKHGDTAFRA-----------KDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPT 388 (423)
Q Consensus 320 ~~~~~g~~~~~~-----------~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~ 388 (423)
.+...|..+... |++++|+..|+++++++|+ +..++.++|.++..+|++++|+..+++|++++ +++.
T Consensus 75 a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~ 152 (217)
T 2pl2_A 75 GYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPR-YAPLHLQRGLVYALLGERDKAEASLKQALALE-DTPE 152 (217)
T ss_dssp HHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHH
T ss_pred HHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-cchH
Confidence 445566666666 7777777777777777776 66777777777777777777777777777777 6677
Q ss_pred HHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 014484 389 ALYLQAACLFSLGMENDARETLKDGTNLEAK 419 (423)
Q Consensus 389 a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 419 (423)
+++++|.+|..+|++++|+..|+++++++|.
T Consensus 153 ~~~~la~~~~~~g~~~~A~~~~~~al~~~P~ 183 (217)
T 2pl2_A 153 IRSALAELYLSMGRLDEALAQYAKALEQAPK 183 (217)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 7777777777777777777777777766665
|
| >2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.47 E-value=2e-14 Score=111.25 Aligned_cols=96 Identities=15% Similarity=0.218 Sum_probs=90.1
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCc------hHHH
Q 014484 317 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW------PTAL 390 (423)
Q Consensus 317 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~------~~a~ 390 (423)
.+..+...|..++..|+|++|+..|+++++++|. +..+++++|.++..+|++++|+..++++++++|++ ..++
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~ 81 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQ-NPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQ 81 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHH
Confidence 3556788999999999999999999999999999 99999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHhCCChHHHHHHHHHh
Q 014484 391 YLQAACLFSLGMENDARETLKDG 413 (423)
Q Consensus 391 ~~~g~~~~~~~~~~~A~~~~~~a 413 (423)
+++|.++..+|++++|++.|++.
T Consensus 82 ~~~~~~~~~~~~~~~a~~~~~~~ 104 (111)
T 2l6j_A 82 YRLELAQGAVGSVQIPVVEVDEL 104 (111)
T ss_dssp HHHHHHHHHHHCCCCCSSSSSSC
T ss_pred HHHHHHHHHHHhHhhhHhHHHHh
Confidence 99999999999999998877653
|
| >3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A | Back alignment and structure |
|---|
Probab=99.46 E-value=4.5e-13 Score=113.87 Aligned_cols=100 Identities=16% Similarity=0.225 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhH------------------
Q 014484 319 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQ------------------ 380 (423)
Q Consensus 319 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~------------------ 380 (423)
..+...|..++.+|+|++|++.|+++++++|+ +..++.++|.+|.++|++++|+..+++++
T Consensus 6 ~iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (184)
T 3vtx_A 6 TIYMDIGDKKRTKGDFDGAIRAYKKVLKADPN-NVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSANF 84 (184)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHH
Confidence 34455666666666666666666666666666 66666666666666666665555555554
Q ss_pred ----------------hcCCCchHHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 014484 381 ----------------VVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAK 419 (423)
Q Consensus 381 ----------------~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 419 (423)
+++|++..+++.+|.++..+|++++|++.|+++++++|.
T Consensus 85 ~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~ 139 (184)
T 3vtx_A 85 MIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPG 139 (184)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcch
Confidence 555556666666666666666666666666666666654
|
| >4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.46 E-value=4.4e-13 Score=118.18 Aligned_cols=100 Identities=17% Similarity=0.159 Sum_probs=95.4
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCch-------HHHH
Q 014484 319 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWP-------TALY 391 (423)
Q Consensus 319 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~-------~a~~ 391 (423)
..+...|..++..|+|++|+..|+++++.+|. +..++.++|.+|..+|++++|+..++++++++|+++ .+|+
T Consensus 43 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~ 121 (228)
T 4i17_A 43 VTAYNCGVCADNIKKYKEAADYFDIAIKKNYN-LANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYL 121 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCS-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcc-hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHH
Confidence 34455899999999999999999999999999 999999999999999999999999999999999999 7799
Q ss_pred HHHHHHHhCCChHHHHHHHHHhhccccc
Q 014484 392 LQAACLFSLGMENDARETLKDGTNLEAK 419 (423)
Q Consensus 392 ~~g~~~~~~~~~~~A~~~~~~al~l~~~ 419 (423)
++|.++..+|++++|++.|++|++++|.
T Consensus 122 ~~g~~~~~~~~~~~A~~~~~~al~~~p~ 149 (228)
T 4i17_A 122 KEGQKFQQAGNIEKAEENYKHATDVTSK 149 (228)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHTTSSCH
T ss_pred HHhHHHHHhccHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999986
|
| >1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B* | Back alignment and structure |
|---|
Probab=99.46 E-value=6e-13 Score=115.79 Aligned_cols=102 Identities=18% Similarity=0.112 Sum_probs=96.4
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCch----------
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWP---------- 387 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~---------- 387 (423)
...+...|..++..|++++|+..|+++++++|. +..+++++|.+|..+|++++|+..+++++++.|++.
T Consensus 37 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 115 (213)
T 1hh8_A 37 SRICFNIGCMYTILKNMTEAEKAFTRSINRDKH-LAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQ 115 (213)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBC
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-chHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccc
Confidence 346778999999999999999999999999999 999999999999999999999999999999888776
Q ss_pred ------HHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 014484 388 ------TALYLQAACLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 388 ------~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
.+++++|.++..+|++++|++.|+++++++|..
T Consensus 116 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~ 154 (213)
T 1hh8_A 116 FKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEP 154 (213)
T ss_dssp CEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSG
T ss_pred cCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCccc
Confidence 999999999999999999999999999999864
|
| >1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A | Back alignment and structure |
|---|
Probab=99.45 E-value=9.7e-13 Score=103.33 Aligned_cols=102 Identities=16% Similarity=0.222 Sum_probs=96.8
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHH
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 397 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 397 (423)
...+...|..++..|++++|++.|.++++.+|. +..++.++|.++...|++++|+..++++++++|+++.+++.+|.++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~ 87 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN-NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAY 87 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcC-cHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHH
Confidence 345677899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHhhcccccc
Q 014484 398 FSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 398 ~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
..+|++++|+..|+++++++|..
T Consensus 88 ~~~~~~~~A~~~~~~~~~~~~~~ 110 (125)
T 1na0_A 88 YKQGDYDEAIEYYQKALELDPNN 110 (125)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHhcCHHHHHHHHHHHHHhCCCc
Confidence 99999999999999999998864
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=99.44 E-value=1e-13 Score=136.54 Aligned_cols=105 Identities=26% Similarity=0.368 Sum_probs=99.1
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHH
Q 014484 316 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAA 395 (423)
Q Consensus 316 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~ 395 (423)
..+..+...|..+++.|+|++|++.|++|++++|. +..+|+++|.+|.++|++++|+.++++|++++|+++.+|+++|.
T Consensus 4 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~ 82 (477)
T 1wao_1 4 KRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAA 82 (477)
T ss_dssp HHHTTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 34556677899999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhccccccC
Q 014484 396 CLFSLGMENDARETLKDGTNLEAKKN 421 (423)
Q Consensus 396 ~~~~~~~~~~A~~~~~~al~l~~~~~ 421 (423)
+|..+|++++|++.|++|++++|...
T Consensus 83 ~~~~~g~~~eA~~~~~~al~~~p~~~ 108 (477)
T 1wao_1 83 SNMALGKFRAALRDYETVVKVKPHDK 108 (477)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHSTTCT
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 99999999999999999999998753
|
| >2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.44 E-value=7.6e-13 Score=111.81 Aligned_cols=102 Identities=18% Similarity=0.139 Sum_probs=97.3
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHH-HHhcCCh--HHHHHHHHHhHhcCCCchHHHHHHH
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLS-YLMNDMP--QEALGDAMQAQVVSPDWPTALYLQA 394 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~-~~~~~~~--~~A~~~~~~a~~l~p~~~~a~~~~g 394 (423)
...+...|..++..|++++|+..|.++++++|. +..++.++|.+ +...|++ ++|+..++++++++|+++.+++.+|
T Consensus 44 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la 122 (177)
T 2e2e_A 44 SEQWALLGEYYLWQNDYSNSLLAYRQALQLRGE-NAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALMLLA 122 (177)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCS-CHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHHHHHHH
Confidence 346678899999999999999999999999999 99999999999 8899999 9999999999999999999999999
Q ss_pred HHHHhCCChHHHHHHHHHhhcccccc
Q 014484 395 ACLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 395 ~~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
.++..+|++++|+..|+++++++|..
T Consensus 123 ~~~~~~g~~~~A~~~~~~al~~~p~~ 148 (177)
T 2e2e_A 123 SDAFMQANYAQAIELWQKVMDLNSPR 148 (177)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHTCCTT
T ss_pred HHHHHcccHHHHHHHHHHHHhhCCCC
Confidence 99999999999999999999999875
|
| >2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis} | Back alignment and structure |
|---|
Probab=99.42 E-value=3.4e-13 Score=105.45 Aligned_cols=85 Identities=15% Similarity=0.134 Sum_probs=81.9
Q ss_pred HHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHhh
Q 014484 335 STAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGT 414 (423)
Q Consensus 335 ~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al 414 (423)
++|+..|+++++.+|+ +..+++++|.+|...|++++|+..++++++++|+++.+|+++|.++..+|++++|+..|++++
T Consensus 2 ~~a~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al 80 (115)
T 2kat_A 2 QAITERLEAMLAQGTD-NMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGL 80 (115)
T ss_dssp CCHHHHHHHHHTTTCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 4689999999999999 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccc
Q 014484 415 NLEAKK 420 (423)
Q Consensus 415 ~l~~~~ 420 (423)
+++|..
T Consensus 81 ~~~~~~ 86 (115)
T 2kat_A 81 AAAQSR 86 (115)
T ss_dssp HHHHHH
T ss_pred Hhcccc
Confidence 998864
|
| >3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A | Back alignment and structure |
|---|
Probab=99.42 E-value=7.6e-14 Score=114.99 Aligned_cols=83 Identities=7% Similarity=-0.232 Sum_probs=79.3
Q ss_pred HHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHhhcc
Q 014484 337 AIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNL 416 (423)
Q Consensus 337 A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l 416 (423)
+-..|.++++++|+ +..+++++|.++.+.|+|++|+..|+++++++|+++.+|+++|.+|..+|+|++|+..|++|+++
T Consensus 21 ~~~~l~~al~l~p~-~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l 99 (151)
T 3gyz_A 21 SGATLKDINAIPDD-MMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFAL 99 (151)
T ss_dssp TSCCTGGGCCSCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHhCCCHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhh
Confidence 33668899999999 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccc
Q 014484 417 EAKK 420 (423)
Q Consensus 417 ~~~~ 420 (423)
+|..
T Consensus 100 ~P~~ 103 (151)
T 3gyz_A 100 GKND 103 (151)
T ss_dssp SSSC
T ss_pred CCCC
Confidence 9974
|
| >1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B* | Back alignment and structure |
|---|
Probab=99.41 E-value=1.8e-12 Score=112.70 Aligned_cols=101 Identities=14% Similarity=0.085 Sum_probs=94.1
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHH
Q 014484 316 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAA 395 (423)
Q Consensus 316 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~ 395 (423)
.++..+...|..++..|+|++|+..|++++ +| +..+++++|.+|..+|++++|+..++++++++|+++.+|+++|.
T Consensus 4 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~--~~--~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~ 79 (213)
T 1hh8_A 4 VEAISLWNEGVLAADKKDWKGALDAFSAVQ--DP--HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGM 79 (213)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHTSS--SC--CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHc--CC--ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHH
Confidence 355677889999999999999999999996 33 67899999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhcccccc
Q 014484 396 CLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 396 ~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
++..+|++++|++.|++++++.|.+
T Consensus 80 ~~~~~~~~~~A~~~~~~al~~~~~~ 104 (213)
T 1hh8_A 80 LYYQTEKYDLAIKDLKEALIQLRGN 104 (213)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTTTTC
T ss_pred HHHHcccHHHHHHHHHHHHHhCCCc
Confidence 9999999999999999999988764
|
| >1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.39 E-value=2.8e-12 Score=115.76 Aligned_cols=103 Identities=12% Similarity=-0.017 Sum_probs=98.5
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHH
Q 014484 317 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 396 (423)
Q Consensus 317 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~ 396 (423)
....+...|..++..|++++|+..|+++++++|. +..++.++|.++...|++++|+..++++++++|+++.+++.+|.+
T Consensus 42 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~ 120 (275)
T 1xnf_A 42 RAQLLYERGVLYDSLGLRALARNDFSQALAIRPD-MPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIA 120 (275)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHHHHHH
Confidence 4556778999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhcccccc
Q 014484 397 LFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 397 ~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
+..+|++++|++.|+++++++|..
T Consensus 121 ~~~~g~~~~A~~~~~~a~~~~~~~ 144 (275)
T 1xnf_A 121 LYYGGRDKLAQDDLLAFYQDDPND 144 (275)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHhccHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999998864
|
| >3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus} | Back alignment and structure |
|---|
Probab=99.36 E-value=3.3e-12 Score=115.07 Aligned_cols=102 Identities=13% Similarity=0.095 Sum_probs=95.8
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCc---HHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCC---chHHHH
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVS---PTVYARRCLSYLMNDMPQEALGDAMQAQVVSPD---WPTALY 391 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~---~~~a~~ 391 (423)
+..+...|..++..|+|++|+..|+++++.+|. + ..+++++|.+|.++|+|++|+..++++++++|+ .+.+++
T Consensus 15 ~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~ 93 (261)
T 3qky_A 15 PQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRT-HEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEY 93 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSC-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHH
Confidence 456788999999999999999999999999998 7 899999999999999999999999999999884 477999
Q ss_pred HHHHHHHh--------CCChHHHHHHHHHhhcccccc
Q 014484 392 LQAACLFS--------LGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 392 ~~g~~~~~--------~~~~~~A~~~~~~al~l~~~~ 420 (423)
.+|.++.. +|++++|+..|+++++++|..
T Consensus 94 ~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~ 130 (261)
T 3qky_A 94 ERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNH 130 (261)
T ss_dssp HHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCc
Confidence 99999999 999999999999999999864
|
| >4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.36 E-value=1.1e-12 Score=104.56 Aligned_cols=78 Identities=15% Similarity=0.048 Sum_probs=72.1
Q ss_pred HHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 014484 342 TQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 342 ~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
.++..++|+ .+.++.++|.+|++.|+|++|+..|++|++++|+++.+|+++|.+|..+|++++|+.+|++|++++|..
T Consensus 3 ar~a~inP~-~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~ 80 (126)
T 4gco_A 3 ARLAYINPE-LAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKF 80 (126)
T ss_dssp ----CCCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred hHHHHHCHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhh
Confidence 355678999 999999999999999999999999999999999999999999999999999999999999999999874
|
| >3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.36 E-value=5.2e-12 Score=112.63 Aligned_cols=101 Identities=21% Similarity=0.267 Sum_probs=96.6
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHH
Q 014484 317 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 396 (423)
Q Consensus 317 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~ 396 (423)
....+...|..++..|++++|+..|+++++.+|. +..++.++|.++...|++++|+..++++++++|+++.+|+.+|.+
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~ 216 (258)
T 3uq3_A 138 KAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPE-DARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATA 216 (258)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcc-cHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 3456778899999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhcccc
Q 014484 397 LFSLGMENDARETLKDGTNLEA 418 (423)
Q Consensus 397 ~~~~~~~~~A~~~~~~al~l~~ 418 (423)
+..+|++++|++.|+++++++|
T Consensus 217 ~~~~g~~~~A~~~~~~a~~~~~ 238 (258)
T 3uq3_A 217 QIAVKEYASALETLDAARTKDA 238 (258)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHHHHHHHhCh
Confidence 9999999999999999999993
|
| >2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.34 E-value=1.9e-12 Score=98.03 Aligned_cols=92 Identities=16% Similarity=0.120 Sum_probs=85.3
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHH-HHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHh
Q 014484 321 SKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPT-VYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFS 399 (423)
Q Consensus 321 ~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~-~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~ 399 (423)
...+|..++..|+|++|+..|+++++.+|+ +.. +++++|.+|..+|++++|+..++++++++|+++.++++
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~------- 74 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPV-GKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR------- 74 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSS-THHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH-------
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH-------
Confidence 356899999999999999999999999999 999 99999999999999999999999999999999999866
Q ss_pred CCChHHHHHHHHHhhccccccC
Q 014484 400 LGMENDARETLKDGTNLEAKKN 421 (423)
Q Consensus 400 ~~~~~~A~~~~~~al~l~~~~~ 421 (423)
+.+.+|+..|+++++++|...
T Consensus 75 -~~~~~a~~~~~~~~~~~p~~~ 95 (99)
T 2kc7_A 75 -KMVMDILNFYNKDMYNQLEHH 95 (99)
T ss_dssp -HHHHHHHHHHCCTTHHHHCCS
T ss_pred -HHHHHHHHHHHHHhccCcccc
Confidence 778899999999999888753
|
| >4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.33 E-value=5.2e-12 Score=119.37 Aligned_cols=102 Identities=17% Similarity=0.090 Sum_probs=97.7
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHH
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 397 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 397 (423)
+..+...|..+++.|+|++|+..|+++++.+|. +..+++++|.+|..+|++++|+..++++++++|+++.+|+.+|.+|
T Consensus 65 ~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 143 (365)
T 4eqf_A 65 WPGAFEEGLKRLKEGDLPVTILFMEAAILQDPG-DAEAWQFLGITQAENENEQAAIVALQRCLELQPNNLKALMALAVSY 143 (365)
T ss_dssp CTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 345778899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHhhcccccc
Q 014484 398 FSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 398 ~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
..+|++++|++.|+++++++|..
T Consensus 144 ~~~g~~~~A~~~~~~al~~~p~~ 166 (365)
T 4eqf_A 144 TNTSHQQDACEALKNWIKQNPKY 166 (365)
T ss_dssp HHTTCHHHHHHHHHHHHHHCHHH
T ss_pred HccccHHHHHHHHHHHHHhCccc
Confidence 99999999999999999998863
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.33 E-value=1.5e-12 Score=133.83 Aligned_cols=97 Identities=9% Similarity=-0.069 Sum_probs=49.5
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHh
Q 014484 320 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFS 399 (423)
Q Consensus 320 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~ 399 (423)
.+...|..++..|+|++|+..|+++++++|+ +..+|+++|.+|..+|++++|+..|++|++++|+++.+|+++|.++..
T Consensus 435 ~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~ 513 (681)
T 2pzi_A 435 LPLMEVRALLDLGDVAKATRKLDDLAERVGW-RWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAEL 513 (681)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhccCcc-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH
Confidence 3444455555555555555555555555555 555555555555555555555555555555555544444444444444
Q ss_pred CCChHHHHHHHHHhhcccc
Q 014484 400 LGMENDARETLKDGTNLEA 418 (423)
Q Consensus 400 ~~~~~~A~~~~~~al~l~~ 418 (423)
+|++++ ++.|++|++++|
T Consensus 514 ~g~~~~-~~~~~~al~~~P 531 (681)
T 2pzi_A 514 AGNTDE-HKFYQTVWSTND 531 (681)
T ss_dssp HTCCCT-TCHHHHHHHHCT
T ss_pred cCChHH-HHHHHHHHHhCC
Confidence 444444 444444444444
|
| >2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A | Back alignment and structure |
|---|
Probab=99.33 E-value=1.6e-11 Score=97.51 Aligned_cols=99 Identities=17% Similarity=0.238 Sum_probs=94.0
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHh
Q 014484 320 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFS 399 (423)
Q Consensus 320 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~ 399 (423)
.+...|..+...|++++|+..|+++++.+|. +..++.++|.++...|++++|+..++++++..|++..+++.+|.++..
T Consensus 37 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~ 115 (136)
T 2fo7_A 37 AWYNLGNAYYKQGDYDEAIEYYQKALELDPR-SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYK 115 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHCCC-chHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH
Confidence 4556788999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHhhccccc
Q 014484 400 LGMENDARETLKDGTNLEAK 419 (423)
Q Consensus 400 ~~~~~~A~~~~~~al~l~~~ 419 (423)
+|++++|+..|+++++++|.
T Consensus 116 ~~~~~~A~~~~~~~~~~~~~ 135 (136)
T 2fo7_A 116 QGDYDEAIEYYQKALELDPR 135 (136)
T ss_dssp TTCHHHHHHHHHHHHHHSTT
T ss_pred HccHHHHHHHHHHHHccCCC
Confidence 99999999999999998875
|
| >3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A | Back alignment and structure |
|---|
Probab=99.32 E-value=3.8e-12 Score=96.93 Aligned_cols=73 Identities=18% Similarity=0.162 Sum_probs=66.0
Q ss_pred CCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 014484 347 GGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 347 ~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
.+|+ ++.+++++|.+|..+|++++|+..++++++++|+++.+|+++|.+|..+|++++|++.|++|+++.+..
T Consensus 2 ~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~ 74 (100)
T 3ma5_A 2 EDPE-DPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREE 74 (100)
T ss_dssp ---C-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred CCcc-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcC
Confidence 4788 899999999999999999999999999999999999999999999999999999999999999988764
|
| >2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A | Back alignment and structure |
|---|
Probab=99.32 E-value=1.5e-11 Score=97.58 Aligned_cols=99 Identities=17% Similarity=0.238 Sum_probs=94.2
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHh
Q 014484 320 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFS 399 (423)
Q Consensus 320 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~ 399 (423)
.+...|..++..|++++|+..|.++++.+|. +..++.++|.++...|++++|+..+++++..+|+++.+++.+|.++..
T Consensus 3 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~ 81 (136)
T 2fo7_A 3 AWYNLGNAYYKQGDYDEAIEYYQKALELDPR-SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYK 81 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCcHHHHHHHHHHHHHcCCc-chhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHH
Confidence 3456789999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHhhccccc
Q 014484 400 LGMENDARETLKDGTNLEAK 419 (423)
Q Consensus 400 ~~~~~~A~~~~~~al~l~~~ 419 (423)
+|++++|++.|+++++.+|.
T Consensus 82 ~~~~~~A~~~~~~~~~~~~~ 101 (136)
T 2fo7_A 82 QGDYDEAIEYYQKALELDPR 101 (136)
T ss_dssp TTCHHHHHHHHHHHHHHCTT
T ss_pred hcCHHHHHHHHHHHHHhCCC
Confidence 99999999999999988775
|
| >2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A | Back alignment and structure |
|---|
Probab=99.32 E-value=7.6e-12 Score=110.25 Aligned_cols=102 Identities=10% Similarity=0.048 Sum_probs=93.7
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCc---HHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchH---HHH
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVS---PTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPT---ALY 391 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~---a~~ 391 (423)
+..+...|..++..|+|++|+..|+++++..|. + ..+++++|.+|.++|+|++|+..++++++++|+++. +++
T Consensus 4 ~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~-~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~ 82 (225)
T 2yhc_A 4 PNEIYATAQQKLQDGNWRQAITQLEALDNRYPF-GPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMY 82 (225)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHH
Confidence 345778899999999999999999999999987 5 479999999999999999999999999999999875 899
Q ss_pred HHHHHHHh------------------CCChHHHHHHHHHhhcccccc
Q 014484 392 LQAACLFS------------------LGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 392 ~~g~~~~~------------------~~~~~~A~~~~~~al~l~~~~ 420 (423)
.+|.++.. +|++++|+..|+++++.+|..
T Consensus 83 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~ 129 (225)
T 2yhc_A 83 MRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNS 129 (225)
T ss_dssp HHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTC
T ss_pred HHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCC
Confidence 99999986 679999999999999999875
|
| >2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=1.4e-12 Score=107.05 Aligned_cols=83 Identities=8% Similarity=-0.043 Sum_probs=79.3
Q ss_pred HHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHhhcc
Q 014484 337 AIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNL 416 (423)
Q Consensus 337 A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l 416 (423)
+-..|+++++++|+ +..+++++|.++...|+|++|+..+++++.++|+++.+|+++|.++..+|++++|+..|++|+++
T Consensus 6 ~~~~~~~al~~~p~-~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l 84 (148)
T 2vgx_A 6 GGGTIAMLNEISSD-TLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVM 84 (148)
T ss_dssp CCCSHHHHTTCCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHcCCHh-hHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 34578999999999 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccc
Q 014484 417 EAKK 420 (423)
Q Consensus 417 ~~~~ 420 (423)
+|..
T Consensus 85 ~p~~ 88 (148)
T 2vgx_A 85 DIXE 88 (148)
T ss_dssp STTC
T ss_pred CCCC
Confidence 9874
|
| >4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.31 E-value=7.5e-12 Score=118.31 Aligned_cols=102 Identities=17% Similarity=0.183 Sum_probs=97.3
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHH
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 397 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 397 (423)
...+...|..+...|++++|+..|+++++++|. +..+|.++|.+|...|++++|+..++++++++|+++.+|+++|.+|
T Consensus 213 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 291 (365)
T 4eqf_A 213 PDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPE-DYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGISC 291 (365)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHH
Confidence 345667899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHhhcccccc
Q 014484 398 FSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 398 ~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
..+|++++|+..|++|++++|..
T Consensus 292 ~~~g~~~~A~~~~~~al~~~~~~ 314 (365)
T 4eqf_A 292 INLGAYREAVSNFLTALSLQRKS 314 (365)
T ss_dssp HHHTCCHHHHHHHHHHHHHHHCC
T ss_pred HHCCCHHHHHHHHHHHHHhCccc
Confidence 99999999999999999999873
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=7.9e-12 Score=125.89 Aligned_cols=99 Identities=15% Similarity=0.030 Sum_probs=66.4
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHh
Q 014484 320 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFS 399 (423)
Q Consensus 320 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~ 399 (423)
.+...|..++..|++++|++.|+++++++|+ +..++.++|.+|..+|++++|+..++++++++|+++.+++++|.+|..
T Consensus 25 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~ 103 (568)
T 2vsy_A 25 AWLMLADAELGMGDTTAGEMAVQRGLALHPG-HPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHALED 103 (568)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHTTSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 4455666666666666666666666666666 666666666666666666666666666666666666666666666666
Q ss_pred CCChHHHHHHHHHhhccccc
Q 014484 400 LGMENDARETLKDGTNLEAK 419 (423)
Q Consensus 400 ~~~~~~A~~~~~~al~l~~~ 419 (423)
+|++++|++.|+++++++|.
T Consensus 104 ~g~~~~A~~~~~~al~~~p~ 123 (568)
T 2vsy_A 104 AGQAEAAAAAYTRAHQLLPE 123 (568)
T ss_dssp TTCHHHHHHHHHHHHHHCTT
T ss_pred cCCHHHHHHHHHHHHHhCCC
Confidence 66666666666666666654
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.31 E-value=1.2e-11 Score=115.71 Aligned_cols=100 Identities=18% Similarity=0.251 Sum_probs=97.1
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHH
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 397 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 397 (423)
+..+...|..++..|+|++|+..|+++++.+|. +..++.++|.++..+|++++|+..++++++++|+++.+++.+|.++
T Consensus 3 ~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 81 (359)
T 3ieg_A 3 VEKHLELGKKLLAAGQLADALSQFHAAVDGDPD-NYIAYYRRATVFLAMGKSKAALPDLTKVIALKMDFTAARLQRGHLL 81 (359)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcc-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcchHHHHHHHHH
Confidence 456788999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHhhcccc
Q 014484 398 FSLGMENDARETLKDGTNLEA 418 (423)
Q Consensus 398 ~~~~~~~~A~~~~~~al~l~~ 418 (423)
..+|++++|+..|+++++++|
T Consensus 82 ~~~~~~~~A~~~~~~~~~~~~ 102 (359)
T 3ieg_A 82 LKQGKLDEAEDDFKKVLKSNP 102 (359)
T ss_dssp HHHTCHHHHHHHHHHHHTSCC
T ss_pred HHcCChHHHHHHHHHHHhcCC
Confidence 999999999999999999988
|
| >2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.31 E-value=8e-12 Score=105.58 Aligned_cols=100 Identities=13% Similarity=-0.018 Sum_probs=68.2
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHH-HhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHH
Q 014484 319 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSY-LMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 397 (423)
Q Consensus 319 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~-~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 397 (423)
..+...|..+...|++++|+..|+++++.+| ++.++..++.+. ...++..+|+..++++++++|+++.+++.+|.++
T Consensus 41 ~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p--~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~la~~~ 118 (176)
T 2r5s_A 41 DVKLAKADCLLETKQFELAQELLATIPLEYQ--DNSYKSLIAKLELHQQAAESPELKRLEQELAANPDNFELACELAVQY 118 (176)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC--CHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHhhhccC--ChHHHHHHHHHHHHhhcccchHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 3455566666666666666666666666655 233333333222 2222333456667777788899999999999999
Q ss_pred HhCCChHHHHHHHHHhhcccccc
Q 014484 398 FSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 398 ~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
..+|++++|+..|+++++++|..
T Consensus 119 ~~~g~~~~A~~~~~~~l~~~p~~ 141 (176)
T 2r5s_A 119 NQVGRDEEALELLWNILKVNLGA 141 (176)
T ss_dssp HHTTCHHHHHHHHHHHHTTCTTT
T ss_pred HHcccHHHHHHHHHHHHHhCccc
Confidence 99999999999999999998863
|
| >3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A | Back alignment and structure |
|---|
Probab=99.30 E-value=2e-11 Score=102.82 Aligned_cols=102 Identities=14% Similarity=0.074 Sum_probs=96.6
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHH
Q 014484 319 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLF 398 (423)
Q Consensus 319 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~ 398 (423)
..+...|..++..|++++|+..|+++++.+|. +..++.++|.++...|++++|+..++++++.+|+++.+++.+|.++.
T Consensus 77 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~ 155 (186)
T 3as5_A 77 KVATVLGLTYVQVQKYDLAVPLLIKVAEANPI-NFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAFSYE 155 (186)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcH-hHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccchHHHHHHHHHHH
Confidence 34567899999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred hCCChHHHHHHHHHhhccccccC
Q 014484 399 SLGMENDARETLKDGTNLEAKKN 421 (423)
Q Consensus 399 ~~~~~~~A~~~~~~al~l~~~~~ 421 (423)
.+|++++|++.|+++++++|...
T Consensus 156 ~~~~~~~A~~~~~~~~~~~~~~~ 178 (186)
T 3as5_A 156 QMGRHEEALPHFKKANELDEGAS 178 (186)
T ss_dssp HTTCHHHHHHHHHHHHHHHHCCC
T ss_pred HcCCHHHHHHHHHHHHHcCCCch
Confidence 99999999999999999988753
|
| >3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A* | Back alignment and structure |
|---|
Probab=99.29 E-value=1.5e-11 Score=112.66 Aligned_cols=101 Identities=10% Similarity=0.015 Sum_probs=89.6
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHH----------------------
Q 014484 319 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDA---------------------- 376 (423)
Q Consensus 319 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~---------------------- 376 (423)
..+...|..+...|++++|+..|+++++.+|+ +..+++++|.++..+|++++|+..+
T Consensus 118 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~ 196 (287)
T 3qou_A 118 ELXAQQAMQLMQESNYTDALPLLXDAWQLSNQ-NGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIELL 196 (287)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTS-CHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCc-chhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHHHHHH
Confidence 45667899999999999999999999999999 8999999999999999988876554
Q ss_pred ------------HHhHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 014484 377 ------------MQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 377 ------------~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
++++.++|+++.+++++|.+|..+|++++|+..|+++++++|..
T Consensus 197 ~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~ 252 (287)
T 3qou_A 197 XQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTA 252 (287)
T ss_dssp HHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTG
T ss_pred hhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhccccc
Confidence 44567799999999999999999999999999999999999875
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A | Back alignment and structure |
|---|
Probab=99.29 E-value=2e-11 Score=118.60 Aligned_cols=104 Identities=17% Similarity=0.248 Sum_probs=99.3
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHH
Q 014484 316 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAA 395 (423)
Q Consensus 316 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~ 395 (423)
..+..+...|..+++.|+|++|+..|+++++.+|. +..+++++|.++..+|++++|+..++++++++|+++.+++.+|.
T Consensus 24 ~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~ 102 (450)
T 2y4t_A 24 ADVEKHLELGKKLLAAGQLADALSQFHAAVDGDPD-NYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQRGH 102 (450)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence 35567788999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhcccccc
Q 014484 396 CLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 396 ~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
+|..+|++++|++.|+++++++|..
T Consensus 103 ~~~~~g~~~~A~~~~~~~~~~~~~~ 127 (450)
T 2y4t_A 103 LLLKQGKLDEAEDDFKKVLKSNPSE 127 (450)
T ss_dssp HHHHTTCHHHHHHHHHHHHTSCCCH
T ss_pred HHHHcCCHHHHHHHHHHHHhcCCCC
Confidence 9999999999999999999998864
|
| >2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.28 E-value=2e-11 Score=107.89 Aligned_cols=98 Identities=15% Similarity=0.158 Sum_probs=58.7
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHh
Q 014484 320 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFS 399 (423)
Q Consensus 320 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~ 399 (423)
.+...|..++..|++++|+..|.++++.+|. +..++.++|.++...|++++|+..++++++++|+++.+++.+|.++..
T Consensus 59 ~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~ 137 (243)
T 2q7f_A 59 PYINFANLLSSVNELERALAFYDKALELDSS-AATAYYGAGNVYVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVK 137 (243)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHcCCc-chHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 3444555556666666666666666666665 556666666666666666666666666666666666666666666666
Q ss_pred CCChHHHHHHHHHhhcccc
Q 014484 400 LGMENDARETLKDGTNLEA 418 (423)
Q Consensus 400 ~~~~~~A~~~~~~al~l~~ 418 (423)
+|++++|+..|+++++++|
T Consensus 138 ~~~~~~A~~~~~~~~~~~~ 156 (243)
T 2q7f_A 138 LEQPKLALPYLQRAVELNE 156 (243)
T ss_dssp TSCHHHHHHHHHHHHHHCT
T ss_pred hccHHHHHHHHHHHHHhCC
Confidence 6666666666666655544
|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.28 E-value=2.2e-11 Score=120.12 Aligned_cols=103 Identities=21% Similarity=0.228 Sum_probs=98.0
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHH
Q 014484 315 MQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQA 394 (423)
Q Consensus 315 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g 394 (423)
...+..++.+|+.+++.|+|++|+..|+++++.+| +..++.++|.++.++|++++|+..++++++++|+++.+|+.+|
T Consensus 3 ~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p--~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~ 80 (514)
T 2gw1_A 3 DKYALALKDKGNQFFRNKKYDDAIKYYNWALELKE--DPVFYSNLSACYVSVGDLKKVVEMSTKALELKPDYSKVLLRRA 80 (514)
T ss_dssp HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSCCHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCc--cHHHHHhHHHHHHHHhhHHHHHHHHHHHhccChHHHHHHHHHH
Confidence 35677889999999999999999999999999998 4889999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHHHHHHHHHhhccccc
Q 014484 395 ACLFSLGMENDARETLKDGTNLEAK 419 (423)
Q Consensus 395 ~~~~~~~~~~~A~~~~~~al~l~~~ 419 (423)
.++..+|++++|+..|+++++++|.
T Consensus 81 ~~~~~~g~~~~A~~~~~~~~~~~~~ 105 (514)
T 2gw1_A 81 SANEGLGKFADAMFDLSVLSLNGDF 105 (514)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHSSSC
T ss_pred HHHHHHhhHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999874
|
| >3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A | Back alignment and structure |
|---|
Probab=99.28 E-value=3.6e-11 Score=101.18 Aligned_cols=101 Identities=12% Similarity=0.055 Sum_probs=95.4
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHH
Q 014484 319 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLF 398 (423)
Q Consensus 319 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~ 398 (423)
..+...|..++..|++++|+..|+++++.+|. +..++.++|.++...|++++|+..++++++.+|+++.+++.+|.++.
T Consensus 43 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~ 121 (186)
T 3as5_A 43 DVALHLGIAYVKTGAVDRGTELLERSLADAPD-NVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALD 121 (186)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHH
Confidence 45667899999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred hCCChHHHHHHHHHhhcccccc
Q 014484 399 SLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 399 ~~~~~~~A~~~~~~al~l~~~~ 420 (423)
.+|++++|++.|+++++++|..
T Consensus 122 ~~~~~~~A~~~~~~~~~~~~~~ 143 (186)
T 3as5_A 122 NLGRFDEAIDSFKIALGLRPNE 143 (186)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTC
T ss_pred HcCcHHHHHHHHHHHHhcCccc
Confidence 9999999999999999988753
|
| >1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A | Back alignment and structure |
|---|
Probab=99.28 E-value=3.2e-11 Score=89.32 Aligned_cols=83 Identities=14% Similarity=0.143 Sum_probs=78.0
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHH
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 397 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 397 (423)
+..+...|..++..|++++|+..|+++++.+|. +..++.++|.++...|++++|+..++++++++|+++.+++++|.++
T Consensus 9 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~ 87 (91)
T 1na3_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN-NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAK 87 (91)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 445677899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCC
Q 014484 398 FSLG 401 (423)
Q Consensus 398 ~~~~ 401 (423)
..+|
T Consensus 88 ~~~g 91 (91)
T 1na3_A 88 QKQG 91 (91)
T ss_dssp HHHC
T ss_pred HhcC
Confidence 8765
|
| >1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A | Back alignment and structure |
|---|
Probab=99.28 E-value=2.8e-11 Score=114.18 Aligned_cols=101 Identities=15% Similarity=0.119 Sum_probs=96.8
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHH
Q 014484 319 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLF 398 (423)
Q Consensus 319 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~ 398 (423)
..+...|..++..|++++|+..|+++++.+|. +..++.++|.++...|++++|+..++++++++|+++.+++.+|.++.
T Consensus 65 ~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~ 143 (368)
T 1fch_A 65 PQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPK-HMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSFT 143 (368)
T ss_dssp SSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 34567899999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred hCCChHHHHHHHHHhhcccccc
Q 014484 399 SLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 399 ~~~~~~~A~~~~~~al~l~~~~ 420 (423)
.+|++++|++.|+++++++|..
T Consensus 144 ~~g~~~~A~~~~~~~~~~~~~~ 165 (368)
T 1fch_A 144 NESLQRQACEILRDWLRYTPAY 165 (368)
T ss_dssp HTTCHHHHHHHHHHHHHTSTTT
T ss_pred HcCCHHHHHHHHHHHHHhCcCc
Confidence 9999999999999999998864
|
| >4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.27 E-value=5.7e-12 Score=124.01 Aligned_cols=101 Identities=13% Similarity=0.043 Sum_probs=95.3
Q ss_pred HHHHHHHHHHHhc---------CCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhc--------CChHHHHHHHHHhHh
Q 014484 319 LNSKKHGDTAFRA---------KDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMN--------DMPQEALGDAMQAQV 381 (423)
Q Consensus 319 ~~~~~~g~~~~~~---------~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~--------~~~~~A~~~~~~a~~ 381 (423)
..+...|..+... |++++|+..|++|++++|+ +..+|+++|.+|..+ |++++|+..|++|++
T Consensus 171 ~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~ 249 (474)
T 4abn_A 171 VSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVL-DGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEK 249 (474)
T ss_dssp HHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHH
Confidence 4566778888888 9999999999999999999 999999999999999 999999999999999
Q ss_pred cCC---CchHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 014484 382 VSP---DWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 382 l~p---~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
++| +++.+|+++|.+|..+|++++|++.|++|++++|..
T Consensus 250 ~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~ 291 (474)
T 4abn_A 250 VDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAW 291 (474)
T ss_dssp HCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred hCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 999 999999999999999999999999999999999874
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=7.9e-12 Score=112.98 Aligned_cols=125 Identities=9% Similarity=-0.067 Sum_probs=96.3
Q ss_pred CCCccceeeeecceeeeeecCCCh-hhHHHHHHHHHHHhcCC-CCCccceEeEEEeCCceeEEEecCCCCCHHhhhccCC
Q 014484 3 GRCSKFSICWFHCHLKSSVLESSD-LGETLNLEEAKAVGNLR-SERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80 (423)
Q Consensus 3 ~~g~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~ 80 (423)
+.+.||+....+..+.+|+..... .....+.+|++++..+. +.+++++++++...+..|+|||+++|.+|.+.+.
T Consensus 26 s~~~v~~~~~~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~~~--- 102 (263)
T 3tm0_A 26 SPAKVYKLVGENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEYE--- 102 (263)
T ss_dssp SSSEEEEEECSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHHHCC---
T ss_pred CCCeEEEEECCCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCeehhhccC---
Confidence 345577776556677777765421 22346889999999994 6778999999999888999999999999987641
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHc-------------------------------------------------------
Q 014484 81 TQPMKWAMRLRVALYLAQALEYCSS------------------------------------------------------- 105 (423)
Q Consensus 81 ~~~~~~~~~~~i~~qi~~~l~~lH~------------------------------------------------------- 105 (423)
+......++.++..+|..||+
T Consensus 103 ----~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 178 (263)
T 3tm0_A 103 ----DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEK 178 (263)
T ss_dssp ----TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHHHHHHHHHHCC
T ss_pred ----CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHHHHHHHHHhcC
Confidence 112234778899999999998
Q ss_pred ----CCCeeeccCCCCCeeecCCCCeEEcccccc
Q 014484 106 ----KGRALYHDLNAYRILFDKDGNPRLSSFGLM 135 (423)
Q Consensus 106 ----~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~ 135 (423)
.. ++|+|++|.||++++++.+.|+||+.+
T Consensus 179 ~~~~~~-l~HgDl~~~Nil~~~~~~~~lIDwe~a 211 (263)
T 3tm0_A 179 PEEELV-FSHGDLGDSNIFVKDGKVSGFIDLGRS 211 (263)
T ss_dssp CCCCEE-EECSSCCTTSEEEETTEEEEECCCTTC
T ss_pred CCCCce-EECCCCCcCcEEEECCcEEEEEEchhc
Confidence 34 899999999999987655679999865
|
| >2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.27 E-value=6e-13 Score=112.46 Aligned_cols=98 Identities=10% Similarity=0.068 Sum_probs=87.1
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHH-HHhC
Q 014484 322 KKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC-LFSL 400 (423)
Q Consensus 322 ~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~-~~~~ 400 (423)
...+..++..|++++|+..|+++++.+|. +..++..+|.+|...|++++|+..++++++++|+++.+++.+|.+ +...
T Consensus 14 ~~~~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~ 92 (177)
T 2e2e_A 14 RDPLHQFASQQNPEAQLQALQDKIRANPQ-NSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQA 92 (177)
T ss_dssp STTTCCCC-----CCCCHHHHHHHHHCCS-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHT
T ss_pred hhhhhhhhhccCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhc
Confidence 34455667889999999999999999999 999999999999999999999999999999999999999999999 8899
Q ss_pred CCh--HHHHHHHHHhhcccccc
Q 014484 401 GME--NDARETLKDGTNLEAKK 420 (423)
Q Consensus 401 ~~~--~~A~~~~~~al~l~~~~ 420 (423)
|++ ++|+..|+++++++|..
T Consensus 93 ~~~~~~~A~~~~~~al~~~p~~ 114 (177)
T 2e2e_A 93 SQHMTAQTRAMIDKALALDSNE 114 (177)
T ss_dssp TTCCCHHHHHHHHHHHHHCTTC
T ss_pred CCcchHHHHHHHHHHHHhCCCc
Confidence 999 99999999999998864
|
| >3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.27 E-value=1.8e-11 Score=109.07 Aligned_cols=102 Identities=14% Similarity=0.124 Sum_probs=95.9
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCc-------hH
Q 014484 316 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW-------PT 388 (423)
Q Consensus 316 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~-------~~ 388 (423)
..+..+...|..++..|+|++|+..|+++++.+ . +..++.++|.++..+|++++|+..++++++++|++ +.
T Consensus 3 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~-~-~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~ 80 (258)
T 3uq3_A 3 SMADKEKAEGNKFYKARQFDEAIEHYNKAWELH-K-DITYLNNRAAAEYEKGEYETAISTLNDAVEQGREMRADYKVISK 80 (258)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-C-CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred hHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhh-c-cHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccccchHHHHH
Confidence 356778899999999999999999999999999 7 89999999999999999999999999999999987 79
Q ss_pred HHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 014484 389 ALYLQAACLFSLGMENDARETLKDGTNLEAK 419 (423)
Q Consensus 389 a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 419 (423)
+++.+|.++..+|++++|++.|+++++++|.
T Consensus 81 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~ 111 (258)
T 3uq3_A 81 SFARIGNAYHKLGDLKKTIEYYQKSLTEHRT 111 (258)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHhcCch
Confidence 9999999999999999999999999996653
|
| >4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.27 E-value=9.2e-12 Score=122.54 Aligned_cols=102 Identities=12% Similarity=-0.019 Sum_probs=97.5
Q ss_pred HHHHHHHHHHHHHhcCCH-HHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHH
Q 014484 317 ETLNSKKHGDTAFRAKDF-STAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAA 395 (423)
Q Consensus 317 ~~~~~~~~g~~~~~~~~~-~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~ 395 (423)
.+..+...|..++..|+| ++|++.|++|++++|. +..+|+++|.+|..+|++++|+..|++|++++|+ +.+++++|.
T Consensus 101 ~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~lg~ 178 (474)
T 4abn_A 101 EAQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPE-LVEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKN-KVSLQNLSM 178 (474)
T ss_dssp CHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCC-HHHHHHHHH
T ss_pred hHHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-HHHHHHHHH
Confidence 455778899999999999 9999999999999999 9999999999999999999999999999999999 799999999
Q ss_pred HHHhC---------CChHHHHHHHHHhhcccccc
Q 014484 396 CLFSL---------GMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 396 ~~~~~---------~~~~~A~~~~~~al~l~~~~ 420 (423)
+|..+ |++++|++.|++|++++|..
T Consensus 179 ~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~ 212 (474)
T 4abn_A 179 VLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLD 212 (474)
T ss_dssp HHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred HHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCC
Confidence 99999 99999999999999999874
|
| >1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A | Back alignment and structure |
|---|
Probab=99.26 E-value=2.3e-11 Score=114.72 Aligned_cols=102 Identities=16% Similarity=0.210 Sum_probs=97.6
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHH
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 397 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 397 (423)
...+...|..+...|++++|+..|+++++++|. +..++.++|.++...|++++|+..++++++++|+++.+++++|.++
T Consensus 217 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~ 295 (368)
T 1fch_A 217 PDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPN-DYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISC 295 (368)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 446677899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHhhcccccc
Q 014484 398 FSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 398 ~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
..+|++++|+..|+++++++|..
T Consensus 296 ~~~g~~~~A~~~~~~al~~~~~~ 318 (368)
T 1fch_A 296 INLGAHREAVEHFLEALNMQRKS 318 (368)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHTC
T ss_pred HHCCCHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999998865
|
| >3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A | Back alignment and structure |
|---|
Probab=99.26 E-value=1.6e-11 Score=122.11 Aligned_cols=103 Identities=25% Similarity=0.295 Sum_probs=93.6
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHH
Q 014484 316 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAA 395 (423)
Q Consensus 316 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~ 395 (423)
..+..+...|..+++.|+|++|+..|+++++.+|+ +..+++++|.||..+|++++|+..++++++++|+++.+++.+|.
T Consensus 23 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~ 101 (537)
T 3fp2_A 23 AYAVQLKNRGNHFFTAKNFNEAIKYYQYAIELDPN-EPVFYSNISACYISTGDLEKVIEFTTKALEIKPDHSKALLRRAS 101 (537)
T ss_dssp HHHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCCC-CcHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCchHHHHHHHHH
Confidence 45678899999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhcccccc
Q 014484 396 CLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 396 ~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
++..+|++++|+..|+ ++.++|..
T Consensus 102 ~~~~~g~~~~A~~~~~-~~~~~~~~ 125 (537)
T 3fp2_A 102 ANESLGNFTDAMFDLS-VLSLNGDF 125 (537)
T ss_dssp HHHHHTCHHHHHHHHH-HHC-----
T ss_pred HHHHcCCHHHHHHHHH-HHhcCCCC
Confidence 9999999999999996 88877763
|
| >2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.26 E-value=2.9e-11 Score=106.85 Aligned_cols=100 Identities=12% Similarity=0.076 Sum_probs=96.0
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHh
Q 014484 320 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFS 399 (423)
Q Consensus 320 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~ 399 (423)
.+...|..++..|++++|+..|+++++.+|. +..++.++|.++...|++++|+..++++++.+|+++.+++.+|.++..
T Consensus 127 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~ 205 (243)
T 2q7f_A 127 LFYMLGTVLVKLEQPKLALPYLQRAVELNEN-DTEARFQFGMCLANEGMLDEALSQFAAVTEQDPGHADAFYNAGVTYAY 205 (243)
T ss_dssp HHHHHHHHHHHTSCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHH
Confidence 4667899999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHhhcccccc
Q 014484 400 LGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 400 ~~~~~~A~~~~~~al~l~~~~ 420 (423)
+|++++|++.|+++++++|..
T Consensus 206 ~~~~~~A~~~~~~~~~~~p~~ 226 (243)
T 2q7f_A 206 KENREKALEMLDKAIDIQPDH 226 (243)
T ss_dssp TTCTTHHHHHHHHHHHHCTTC
T ss_pred ccCHHHHHHHHHHHHccCcch
Confidence 999999999999999998874
|
| >2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A | Back alignment and structure |
|---|
Probab=99.25 E-value=4.6e-11 Score=106.43 Aligned_cols=100 Identities=10% Similarity=0.024 Sum_probs=69.1
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHh--cCCCchHHHHHHHHH
Q 014484 319 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQV--VSPDWPTALYLQAAC 396 (423)
Q Consensus 319 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~--l~p~~~~a~~~~g~~ 396 (423)
..+...|..++..|++++|++.|.++++.+|. +..++.++|.++...|++++|+..++++++ .+|+++.+++.+|.+
T Consensus 72 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~ 150 (252)
T 2ho1_A 72 DAHAALAVVFQTEMEPKLADEEYRKALASDSR-NARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLV 150 (252)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcC-cHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHH
Confidence 34555666677777777777777777777776 666777777777777777777777777776 666666777777777
Q ss_pred HHhCCChHHHHHHHHHhhccccc
Q 014484 397 LFSLGMENDARETLKDGTNLEAK 419 (423)
Q Consensus 397 ~~~~~~~~~A~~~~~~al~l~~~ 419 (423)
+..+|++++|++.|+++++++|.
T Consensus 151 ~~~~g~~~~A~~~~~~~~~~~~~ 173 (252)
T 2ho1_A 151 SLQMKKPAQAKEYFEKSLRLNRN 173 (252)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCSC
T ss_pred HHHcCCHHHHHHHHHHHHhcCcc
Confidence 77777777777777777666554
|
| >3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.24 E-value=2.4e-11 Score=109.56 Aligned_cols=101 Identities=5% Similarity=-0.044 Sum_probs=88.4
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCC---CcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHH
Q 014484 319 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTM---VSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAA 395 (423)
Q Consensus 319 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~---~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~ 395 (423)
..+...|..++..|+|++|+..|+++++ .|. ....+|.++|.++..+|++++|+..++++++++|+++.+|+.+|.
T Consensus 38 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~-~~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~ 116 (272)
T 3u4t_A 38 YIYNRRAVCYYELAKYDLAQKDIETYFS-KVNATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGS 116 (272)
T ss_dssp TTHHHHHHHHHHTTCHHHHHHHHHHHHT-TSCTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHh-ccCchhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccHHHHHHHHH
Confidence 3667788999999999999999999998 443 124458999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhcccccc
Q 014484 396 CLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 396 ~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
++..+|++++|++.|+++++++|..
T Consensus 117 ~~~~~~~~~~A~~~~~~al~~~~~~ 141 (272)
T 3u4t_A 117 YFYNKGNFPLAIQYMEKQIRPTTTD 141 (272)
T ss_dssp HHHHTTCHHHHHHHHGGGCCSSCCC
T ss_pred HHHHccCHHHHHHHHHHHhhcCCCc
Confidence 9999999999999999999987754
|
| >3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.24 E-value=3.6e-11 Score=108.39 Aligned_cols=98 Identities=13% Similarity=0.065 Sum_probs=67.0
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHhC
Q 014484 321 SKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSL 400 (423)
Q Consensus 321 ~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~ 400 (423)
+...|..+...|++++|+..|+++++.+|. +..++.++|.+|..+|++++|+..++++++++|+++.+|+++|...+..
T Consensus 77 ~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~ 155 (272)
T 3u4t_A 77 FEYYGKILMKKGQDSLAIQQYQAAVDRDTT-RLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYYYN 155 (272)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHhcCcc-cHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHH
Confidence 455666677777777777777777777776 6677777777777777777777777777777777777777777333344
Q ss_pred CChHHHHHHHHHhhccccc
Q 014484 401 GMENDARETLKDGTNLEAK 419 (423)
Q Consensus 401 ~~~~~A~~~~~~al~l~~~ 419 (423)
+++++|++.|+++++++|.
T Consensus 156 ~~~~~A~~~~~~a~~~~p~ 174 (272)
T 3u4t_A 156 KEYVKADSSFVKVLELKPN 174 (272)
T ss_dssp TCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHHHHHhCcc
Confidence 5777777777777766664
|
| >3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.24 E-value=2.9e-11 Score=111.03 Aligned_cols=92 Identities=12% Similarity=0.062 Sum_probs=86.5
Q ss_pred HHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHhCCChHH-H
Q 014484 328 AFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMEND-A 406 (423)
Q Consensus 328 ~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~-A 406 (423)
+...|++++|+..|+++++.+|. +..+++++|.++.++|++++|+..+++|++++|+++.+++++|.++..+|++++ |
T Consensus 176 ~~~~~~~~eA~~~~~~~l~~~p~-~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa 254 (291)
T 3mkr_A 176 AAGGEKLQDAYYIFQEMADKCSP-TLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPEVT 254 (291)
T ss_dssp HHCTTHHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHH
T ss_pred HhCchHHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHH
Confidence 34568999999999999999999 999999999999999999999999999999999999999999999999999987 5
Q ss_pred HHHHHHhhcccccc
Q 014484 407 RETLKDGTNLEAKK 420 (423)
Q Consensus 407 ~~~~~~al~l~~~~ 420 (423)
.+.++++++++|.+
T Consensus 255 ~~~~~~~~~~~P~~ 268 (291)
T 3mkr_A 255 NRYLSQLKDAHRSH 268 (291)
T ss_dssp HHHHHHHHHHCTTC
T ss_pred HHHHHHHHHhCCCC
Confidence 68889999999975
|
| >2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis} | Back alignment and structure |
|---|
Probab=99.24 E-value=9.1e-11 Score=102.12 Aligned_cols=100 Identities=15% Similarity=0.011 Sum_probs=77.6
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhc-CChHHHHHHHHHhHh--cCCCchHHHHHHHH
Q 014484 319 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMN-DMPQEALGDAMQAQV--VSPDWPTALYLQAA 395 (423)
Q Consensus 319 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~-~~~~~A~~~~~~a~~--l~p~~~~a~~~~g~ 395 (423)
..+...|..+...|++++|+..|.++++.+|. +..++.++|.++... |++++|+..++++++ .+|++..+++.+|.
T Consensus 43 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~ 121 (225)
T 2vq2_A 43 LAWLVRAEIYQYLKVNDKAQESFRQALSIKPD-SAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGI 121 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHH
Confidence 35556777777788888888888888888887 777788888888888 888888888888877 66666777888888
Q ss_pred HHHhCCChHHHHHHHHHhhccccc
Q 014484 396 CLFSLGMENDARETLKDGTNLEAK 419 (423)
Q Consensus 396 ~~~~~~~~~~A~~~~~~al~l~~~ 419 (423)
++..+|++++|+..|+++++.+|.
T Consensus 122 ~~~~~~~~~~A~~~~~~~~~~~~~ 145 (225)
T 2vq2_A 122 CSAKQGQFGLAEAYLKRSLAAQPQ 145 (225)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCC
Confidence 888888888888888888777664
|
| >1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.23 E-value=2.9e-11 Score=111.04 Aligned_cols=102 Identities=15% Similarity=0.084 Sum_probs=89.7
Q ss_pred HHHHHHHHHHHHhc-CCHHHHHHHHHHHhcCCCCCc------HHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchH--
Q 014484 318 TLNSKKHGDTAFRA-KDFSTAIDCYTQFIDGGTMVS------PTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPT-- 388 (423)
Q Consensus 318 ~~~~~~~g~~~~~~-~~~~~A~~~~~~ai~~~p~~~------~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~-- 388 (423)
+..+...|..+... |++++|+..|++|+++.|. . ..++.++|.++..+|+|++|+..+++++++.|++..
T Consensus 117 a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~-~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 195 (292)
T 1qqe_A 117 ANFKFELGEILENDLHDYAKAIDCYELAGEWYAQ-DQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQ 195 (292)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTG
T ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHh-CCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCccc
Confidence 45677889999996 9999999999999999875 3 568999999999999999999999999999998654
Q ss_pred -----HHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 014484 389 -----ALYLQAACLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 389 -----a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
+|+++|.++..+|++++|+..|+++++++|..
T Consensus 196 ~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~ 232 (292)
T 1qqe_A 196 WSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNF 232 (292)
T ss_dssp GGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC----
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 68999999999999999999999999999963
|
| >3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus} | Back alignment and structure |
|---|
Probab=99.23 E-value=3e-11 Score=108.78 Aligned_cols=103 Identities=14% Similarity=0.059 Sum_probs=94.1
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCC--cHHHHhhHHHHHHh--------cCChHHHHHHHHHhHhcCCCch
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMV--SPTVYARRCLSYLM--------NDMPQEALGDAMQAQVVSPDWP 387 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~--~~~~~~~~~~~~~~--------~~~~~~A~~~~~~a~~l~p~~~ 387 (423)
...+...|..++..|+|++|+..|+++++..|++ ...+++++|.++.. +|++++|+..++++++.+|++.
T Consensus 52 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~ 131 (261)
T 3qky_A 52 ADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHE 131 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCT
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCch
Confidence 3456778999999999999999999999998851 46789999999999 9999999999999999999987
Q ss_pred HHH-----------------HHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 014484 388 TAL-----------------YLQAACLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 388 ~a~-----------------~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
.++ +.+|.+|..+|+|++|+..|+++++.+|..
T Consensus 132 ~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~ 181 (261)
T 3qky_A 132 LVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDT 181 (261)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCC
Confidence 777 999999999999999999999999998863
|
| >1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.23 E-value=4.8e-11 Score=113.79 Aligned_cols=100 Identities=15% Similarity=0.058 Sum_probs=90.3
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHh
Q 014484 320 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFS 399 (423)
Q Consensus 320 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~ 399 (423)
.+...|..+.+.|++++|+..|+++++++|. +..++.++|.++.+.|++++|+..++++++++|+++.+++++|.++..
T Consensus 273 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 351 (388)
T 1w3b_A 273 AYCNLANALKEKGSVAEAEDCYNTALRLCPT-HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQ 351 (388)
T ss_dssp HHHHHHHHHHHHSCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCcc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Confidence 4567788888999999999999999999998 899999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHhhcccccc
Q 014484 400 LGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 400 ~~~~~~A~~~~~~al~l~~~~ 420 (423)
+|++++|+..|+++++++|..
T Consensus 352 ~g~~~~A~~~~~~a~~~~p~~ 372 (388)
T 1w3b_A 352 QGKLQEALMHYKEAIRISPTF 372 (388)
T ss_dssp TTCCHHHHHHHHHHHTTCTTC
T ss_pred cCCHHHHHHHHHHHHhhCCCC
Confidence 999999999999999988863
|
| >1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A | Back alignment and structure |
|---|
Probab=99.23 E-value=3.3e-11 Score=113.02 Aligned_cols=97 Identities=13% Similarity=0.074 Sum_probs=90.9
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHH
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 397 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 397 (423)
+..+...|..+++.|+|++|+..|++|++++|+ +..+|+++|.+|..+|++++|+.+|++|++++|++..+++.+|.++
T Consensus 196 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~ 274 (336)
T 1p5q_A 196 LASHLNLAMCHLKLQAFSAAIESCNKALELDSN-NEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQ 274 (336)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Confidence 456778999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHH-HHHHHHhhc
Q 014484 398 FSLGMENDA-RETLKDGTN 415 (423)
Q Consensus 398 ~~~~~~~~A-~~~~~~al~ 415 (423)
..+|++++| ...|++++.
T Consensus 275 ~~~~~~~~a~~~~~~~~~~ 293 (336)
T 1p5q_A 275 QRIRRQLAREKKLYANMFE 293 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 999999999 556777664
|
| >2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A | Back alignment and structure |
|---|
Probab=99.23 E-value=5.8e-11 Score=105.79 Aligned_cols=100 Identities=12% Similarity=0.009 Sum_probs=95.4
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHH
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 397 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 397 (423)
+..+...|..++..|++++|+..|+++++.+|. +..++..+|.++...|++++|+..++++++++|+++.+++.+|.++
T Consensus 37 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~ 115 (252)
T 2ho1_A 37 RDAYIQLGLGYLQRGNTEQAKVPLRKALEIDPS-SADAHAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGFL 115 (252)
T ss_dssp HHHHHHHHHHHHHTTCTGGGHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHH
Confidence 556778999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHhhc--ccc
Q 014484 398 FSLGMENDARETLKDGTN--LEA 418 (423)
Q Consensus 398 ~~~~~~~~A~~~~~~al~--l~~ 418 (423)
..+|++++|++.|+++++ .+|
T Consensus 116 ~~~g~~~~A~~~~~~~~~~~~~~ 138 (252)
T 2ho1_A 116 YEQKRYEEAYQRLLEASQDTLYP 138 (252)
T ss_dssp HHTTCHHHHHHHHHHHTTCTTCT
T ss_pred HHHhHHHHHHHHHHHHHhCccCc
Confidence 999999999999999998 444
|
| >4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.23 E-value=2.5e-11 Score=96.78 Aligned_cols=70 Identities=10% Similarity=-0.064 Sum_probs=66.7
Q ss_pred cHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHhhccccccC
Q 014484 352 SPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKKN 421 (423)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 421 (423)
.+.++.++|.++++.|+|++|+..|++|++++|+++.+|+++|.+|..+|+|++|+++|++|++++|...
T Consensus 7 ~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~ 76 (127)
T 4gcn_A 7 AAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETR 76 (127)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccc
Confidence 4678999999999999999999999999999999999999999999999999999999999999998753
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.23 E-value=1e-10 Score=109.43 Aligned_cols=100 Identities=15% Similarity=0.201 Sum_probs=93.7
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcH----HHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHH
Q 014484 320 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSP----TVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAA 395 (423)
Q Consensus 320 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~----~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~ 395 (423)
.....|..++..|++++|+..|+++++.+|+ +. .++.++|.++...|++++|+..++++++++|+++.+++.+|.
T Consensus 236 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~ 314 (359)
T 3ieg_A 236 KLIESAEELIRDGRYTDATSKYESVMKTEPS-VAEYTVRSKERICHCFSKDEKPVEAIRICSEVLQMEPDNVNALKDRAE 314 (359)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-SHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-chHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccHHHHHHHHH
Confidence 4456799999999999999999999999999 76 457789999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhcccccc
Q 014484 396 CLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 396 ~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
++..+|++++|++.|+++++++|..
T Consensus 315 ~~~~~g~~~~A~~~~~~a~~~~p~~ 339 (359)
T 3ieg_A 315 AYLIEEMYDEAIQDYEAAQEHNEND 339 (359)
T ss_dssp HHHHTTCHHHHHHHHHHHHTTCTTC
T ss_pred HHHHcCCHHHHHHHHHHHHhcCCCC
Confidence 9999999999999999999999974
|
| >1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.22 E-value=9.1e-11 Score=111.82 Aligned_cols=102 Identities=15% Similarity=0.052 Sum_probs=95.9
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHH
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 397 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 397 (423)
...+...|..+...|++++|+..|+++++++|+ +..++.++|.++.+.|++++|+..++++++++|+++.+++.+|.++
T Consensus 237 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 315 (388)
T 1w3b_A 237 AVVHGNLACVYYEQGLIDLAIDTYRRAIELQPH-FPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIK 315 (388)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSS-CHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHH
Confidence 345667899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHhhcccccc
Q 014484 398 FSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 398 ~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
..+|++++|++.|+++++++|..
T Consensus 316 ~~~g~~~~A~~~~~~al~~~p~~ 338 (388)
T 1w3b_A 316 REQGNIEEAVRLYRKALEVFPEF 338 (388)
T ss_dssp HTTTCHHHHHHHHHHHTTSCTTC
T ss_pred HHcCCHHHHHHHHHHHHhcCCCc
Confidence 99999999999999999998863
|
| >2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A | Back alignment and structure |
|---|
Probab=99.21 E-value=1.4e-11 Score=100.12 Aligned_cols=81 Identities=10% Similarity=-0.026 Sum_probs=75.2
Q ss_pred HHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHhhcccc
Q 014484 339 DCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEA 418 (423)
Q Consensus 339 ~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 418 (423)
..|.++++++|+ +..+++++|.++...|+|++|+..+++++.++|+++.+|+.+|.++..+|+|++|+..|++|++++|
T Consensus 5 ~~l~~al~~~p~-~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p 83 (142)
T 2xcb_A 5 GTLAMLRGLSED-TLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDI 83 (142)
T ss_dssp ----CCTTCCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred hhHHHHHcCCHH-HHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCC
Confidence 578899999999 9999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cc
Q 014484 419 KK 420 (423)
Q Consensus 419 ~~ 420 (423)
..
T Consensus 84 ~~ 85 (142)
T 2xcb_A 84 NE 85 (142)
T ss_dssp TC
T ss_pred CC
Confidence 74
|
| >3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A | Back alignment and structure |
|---|
Probab=99.21 E-value=9.8e-11 Score=108.16 Aligned_cols=102 Identities=12% Similarity=0.036 Sum_probs=97.4
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHH
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 397 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 397 (423)
...+..+|..++..|++++|+..|+++++.+|+ +..++..+|.++...|++++|+..++++++++|+++.+++.+|.++
T Consensus 21 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~ 99 (327)
T 3cv0_A 21 HENPMEEGLSMLKLANLAEAALAFEAVCQAAPE-REEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSH 99 (327)
T ss_dssp SSCHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCCHHHHHHHHHHH
Confidence 345678899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHhhcccccc
Q 014484 398 FSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 398 ~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
..+|++++|++.|+++++++|..
T Consensus 100 ~~~~~~~~A~~~~~~~~~~~~~~ 122 (327)
T 3cv0_A 100 TNEHNANAALASLRAWLLSQPQY 122 (327)
T ss_dssp HHTTCHHHHHHHHHHHHHTSTTT
T ss_pred HHcCCHHHHHHHHHHHHHhCCcc
Confidence 99999999999999999998864
|
| >3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.21 E-value=3.3e-10 Score=104.70 Aligned_cols=101 Identities=14% Similarity=-0.007 Sum_probs=92.7
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHH
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 397 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 397 (423)
...+...|..+...|++++|+..|+++++.+|. +..++.++|.++...|++++|+..++++++++|+++.+++.+|.++
T Consensus 125 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~ 203 (330)
T 3hym_B 125 GPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKG-CHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVA 203 (330)
T ss_dssp THHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTT-CSHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhccc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCChHHHHHHHHHH
Confidence 346778899999999999999999999999999 8889999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHhhccccc
Q 014484 398 FSLGMENDARETLKDGTNLEAK 419 (423)
Q Consensus 398 ~~~~~~~~A~~~~~~al~l~~~ 419 (423)
..+|++++|+..|++++++.+.
T Consensus 204 ~~~~~~~~A~~~~~~a~~~~~~ 225 (330)
T 3hym_B 204 FQNGEWKTAEKWFLDALEKIKA 225 (330)
T ss_dssp HHTTCHHHHHHHHHHHHHHHTT
T ss_pred HHcccHHHHHHHHHHHHHHhhh
Confidence 9999999999999999987765
|
| >3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A | Back alignment and structure |
|---|
Probab=99.20 E-value=1.1e-10 Score=107.77 Aligned_cols=101 Identities=13% Similarity=0.132 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHH
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 397 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 397 (423)
...+...|..+...|++++|+..|+++++.+|. +..++.++|.++...|++++|+..++++++++|+++.+++.+|.++
T Consensus 172 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~ 250 (327)
T 3cv0_A 172 AQLHASLGVLYNLSNNYDSAAANLRRAVELRPD-DAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAVSY 250 (327)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 345677899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHhhccccc
Q 014484 398 FSLGMENDARETLKDGTNLEAK 419 (423)
Q Consensus 398 ~~~~~~~~A~~~~~~al~l~~~ 419 (423)
..+|++++|++.|+++++++|.
T Consensus 251 ~~~g~~~~A~~~~~~a~~~~~~ 272 (327)
T 3cv0_A 251 SNMSQYDLAAKQLVRAIYMQVG 272 (327)
T ss_dssp HHTTCHHHHHHHHHHHHHHHTT
T ss_pred HHhccHHHHHHHHHHHHHhCCc
Confidence 9999999999999999999887
|
| >1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A | Back alignment and structure |
|---|
Probab=99.19 E-value=9.7e-11 Score=96.99 Aligned_cols=99 Identities=15% Similarity=0.015 Sum_probs=89.8
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHH--
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAA-- 395 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~-- 395 (423)
...+...|..++..|+|++|+..|.++++++|. +..+++++|.++..+|++++|+..++++++++|++..++..++.
T Consensus 47 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~ 125 (166)
T 1a17_A 47 AIYYGNRSLAYLRTECYGYALGDATRAIELDKK-YIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECN 125 (166)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 345677899999999999999999999999999 99999999999999999999999999999999999999955555
Q ss_pred HHHhCCChHHHHHHHHHhhccc
Q 014484 396 CLFSLGMENDARETLKDGTNLE 417 (423)
Q Consensus 396 ~~~~~~~~~~A~~~~~~al~l~ 417 (423)
.+..+|++++|++.++++..+-
T Consensus 126 ~~~~~~~~~~A~~~~~~~~~~~ 147 (166)
T 1a17_A 126 KIVKQKAFERAIAGDEHKRSVV 147 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccchHHHh
Confidence 4889999999999999886543
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A | Back alignment and structure |
|---|
Probab=99.19 E-value=1.7e-10 Score=111.89 Aligned_cols=100 Identities=15% Similarity=0.202 Sum_probs=94.3
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcH----HHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHH
Q 014484 320 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSP----TVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAA 395 (423)
Q Consensus 320 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~----~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~ 395 (423)
.....|..++..|++++|+..|+++++.+|. +. .++.++|.++.+.|++++|+..++++++++|+++.+|+.+|.
T Consensus 259 ~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~ 337 (450)
T 2y4t_A 259 KLIESAEELIRDGRYTDATSKYESVMKTEPS-IAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRAE 337 (450)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCCS-SHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-chHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccHHHHHHHHH
Confidence 4456699999999999999999999999998 74 589999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhcccccc
Q 014484 396 CLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 396 ~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
++..+|++++|+..|+++++++|..
T Consensus 338 ~~~~~~~~~~A~~~~~~al~~~p~~ 362 (450)
T 2y4t_A 338 AYLIEEMYDEAIQDYETAQEHNEND 362 (450)
T ss_dssp HHHHTTCHHHHHHHHHHHHTTSSSC
T ss_pred HHHHhcCHHHHHHHHHHHHHhCcch
Confidence 9999999999999999999999874
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.18 E-value=1.1e-10 Score=117.51 Aligned_cols=102 Identities=10% Similarity=-0.006 Sum_probs=97.5
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHH
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 397 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 397 (423)
...+...|..+...|++++|++.|+++++++|+ +..+++++|.+|.++|++++|++.++++++++|+++.+++++|.++
T Consensus 57 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 135 (568)
T 2vsy_A 57 PEAVARLGRVRWTQQRHAEAAVLLQQASDAAPE-HPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWR 135 (568)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 345677899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhC---CChHHHHHHHHHhhcccccc
Q 014484 398 FSL---GMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 398 ~~~---~~~~~A~~~~~~al~l~~~~ 420 (423)
..+ |++++|++.|+++++.+|..
T Consensus 136 ~~~~~~g~~~~A~~~~~~al~~~p~~ 161 (568)
T 2vsy_A 136 RRLCDWRALDVLSAQVRAAVAQGVGA 161 (568)
T ss_dssp HHTTCCTTHHHHHHHHHHHHHHTCCC
T ss_pred HHhhccccHHHHHHHHHHHHhcCCcc
Confidence 999 99999999999999999874
|
| >3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.18 E-value=7.5e-11 Score=109.10 Aligned_cols=102 Identities=15% Similarity=0.065 Sum_probs=95.5
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCC---------CCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchH
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGG---------TMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPT 388 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~---------p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~ 388 (423)
...+...|..++..|++++|+..|+++++.. |. ...++.++|.++...|++++|+..++++++++|+++.
T Consensus 193 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~ 271 (330)
T 3hym_B 193 PFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDK-WEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQNAS 271 (330)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTT-CCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCSH
T ss_pred hHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccH-HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCccchH
Confidence 3456778999999999999999999999876 55 6789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 014484 389 ALYLQAACLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 389 a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
+++.+|.++..+|++++|++.|+++++++|..
T Consensus 272 ~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~ 303 (330)
T 3hym_B 272 TYSAIGYIHSLMGNFENAVDYFHTALGLRRDD 303 (330)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHTTTTTCSCC
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHccCCCc
Confidence 99999999999999999999999999999864
|
| >2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis} | Back alignment and structure |
|---|
Probab=99.18 E-value=1.7e-10 Score=100.41 Aligned_cols=100 Identities=10% Similarity=-0.019 Sum_probs=94.6
Q ss_pred HHHHHHHHHHHHhc-CCHHHHHHHHHHHhc--CCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHH
Q 014484 318 TLNSKKHGDTAFRA-KDFSTAIDCYTQFID--GGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQA 394 (423)
Q Consensus 318 ~~~~~~~g~~~~~~-~~~~~A~~~~~~ai~--~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g 394 (423)
...+...|..++.. |++++|+..|+++++ .+|. +..++.++|.++...|++++|+..++++++.+|+++.+++.+|
T Consensus 76 ~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la 154 (225)
T 2vq2_A 76 AEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPT-PYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELA 154 (225)
T ss_dssp HHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSC-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcc-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHH
Confidence 44667889999999 999999999999999 6677 7899999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHHHHHHHHHhhcccc
Q 014484 395 ACLFSLGMENDARETLKDGTNLEA 418 (423)
Q Consensus 395 ~~~~~~~~~~~A~~~~~~al~l~~ 418 (423)
.++..+|++++|++.|+++++++|
T Consensus 155 ~~~~~~~~~~~A~~~~~~~~~~~~ 178 (225)
T 2vq2_A 155 RTKMLAGQLGDADYYFKKYQSRVE 178 (225)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHC
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCC
Confidence 999999999999999999999887
|
| >1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.18 E-value=5.7e-11 Score=109.04 Aligned_cols=104 Identities=9% Similarity=-0.188 Sum_probs=93.1
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCC-----cHHHHhhHHHHHHhc-CChHHHHHHHHHhHhcCCCc----
Q 014484 317 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMV-----SPTVYARRCLSYLMN-DMPQEALGDAMQAQVVSPDW---- 386 (423)
Q Consensus 317 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-----~~~~~~~~~~~~~~~-~~~~~A~~~~~~a~~l~p~~---- 386 (423)
.+..+...|..+...|++++|+..|++|+++.|.. ...++.++|.+|... |++++|+..|++|+++.|+.
T Consensus 76 ~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~ 155 (292)
T 1qqe_A 76 AGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVA 155 (292)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChH
Confidence 35577889999999999999999999999987751 156899999999996 99999999999999998865
Q ss_pred --hHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 014484 387 --PTALYLQAACLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 387 --~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
+.++.++|.++..+|+|++|+..|+++++++|..
T Consensus 156 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 191 (292)
T 1qqe_A 156 LSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGN 191 (292)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcC
Confidence 5789999999999999999999999999998764
|
| >1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.16 E-value=2.7e-10 Score=102.53 Aligned_cols=99 Identities=14% Similarity=0.115 Sum_probs=83.8
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCch------------
Q 014484 320 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWP------------ 387 (423)
Q Consensus 320 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~------------ 387 (423)
.+...|..++..|++++|+..|+++++++|. +..++.++|.+|..+|++++|+..++++++++|++.
T Consensus 79 ~~~~la~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~ 157 (275)
T 1xnf_A 79 VFNYLGIYLTQAGNFDAAYEAFDSVLELDPT-YNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLAEQK 157 (275)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHhcCcc-ccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCChHHHHHHHHHHHh
Confidence 4566788888889999999999999999988 888899999999999999999999999888888764
Q ss_pred ----------------------------------------------------------HHHHHHHHHHHhCCChHHHHHH
Q 014484 388 ----------------------------------------------------------TALYLQAACLFSLGMENDARET 409 (423)
Q Consensus 388 ----------------------------------------------------------~a~~~~g~~~~~~~~~~~A~~~ 409 (423)
.+++.+|.++..+|++++|+..
T Consensus 158 ~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~ 237 (275)
T 1xnf_A 158 LDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMERLKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSATAL 237 (275)
T ss_dssp HCHHHHHHHHHHHHHHSCCCSTHHHHHHHHTTSSCHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred cCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHhcCHHHHHHHHHHHhcccccccccccHHHHHHHHHHHHcCCHHHHHHH
Confidence 6677788888888888888888
Q ss_pred HHHhhccccc
Q 014484 410 LKDGTNLEAK 419 (423)
Q Consensus 410 ~~~al~l~~~ 419 (423)
|+++++++|.
T Consensus 238 ~~~al~~~p~ 247 (275)
T 1xnf_A 238 FKLAVANNVH 247 (275)
T ss_dssp HHHHHTTCCT
T ss_pred HHHHHhCCch
Confidence 8888888775
|
| >2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A | Back alignment and structure |
|---|
Probab=99.16 E-value=9.7e-11 Score=103.09 Aligned_cols=101 Identities=14% Similarity=0.045 Sum_probs=90.6
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcH---HHHhhHHHHHHh------------------cCChHHHHHHHH
Q 014484 319 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSP---TVYARRCLSYLM------------------NDMPQEALGDAM 377 (423)
Q Consensus 319 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~---~~~~~~~~~~~~------------------~~~~~~A~~~~~ 377 (423)
..+...|..+++.|+|++|+..|+++++.+|+ +. .+++++|.++.. .|++++|+..++
T Consensus 42 ~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~-~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~ 120 (225)
T 2yhc_A 42 QVQLDLIYAYYKNADLPLAQAAIDRFIRLNPT-HPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFS 120 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcC-CCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHH
Confidence 35667899999999999999999999999998 65 389999999986 578999999999
Q ss_pred HhHhcCCCchHHH-----------------HHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 014484 378 QAQVVSPDWPTAL-----------------YLQAACLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 378 ~a~~l~p~~~~a~-----------------~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
++++.+|++..++ +.+|.+|...|++++|+..|+++++..|..
T Consensus 121 ~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~ 180 (225)
T 2yhc_A 121 KLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDT 180 (225)
T ss_dssp HHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTS
T ss_pred HHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCC
Confidence 9999999988665 688999999999999999999999988763
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=99.15 E-value=3.5e-11 Score=118.33 Aligned_cols=101 Identities=17% Similarity=0.096 Sum_probs=90.6
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHH-
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC- 396 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~- 396 (423)
+..+...|..+++.|+|++|++.|++|++++|+ +..+++++|.+|..+|++++|++.+++|++++|+++.++..+|.+
T Consensus 40 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~-~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~ 118 (477)
T 1wao_1 40 AIYYGNRSLAYLRTECYGYALGDATRAIELDKK-YIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECN 118 (477)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 456778999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred -HHhCCChHHHHHHHH-----------Hhhccccc
Q 014484 397 -LFSLGMENDARETLK-----------DGTNLEAK 419 (423)
Q Consensus 397 -~~~~~~~~~A~~~~~-----------~al~l~~~ 419 (423)
+..+|++++|++.++ ++++++|.
T Consensus 119 ~~~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~ 153 (477)
T 1wao_1 119 KIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDE 153 (477)
T ss_dssp HHHHHHHHCCC------CCSTTTCCTTSSCCCCTT
T ss_pred HHHHHHHHHHHhccccccchhHhhhhhhhcccccc
Confidence 899999999999999 77777765
|
| >2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.13 E-value=3.1e-10 Score=90.00 Aligned_cols=84 Identities=11% Similarity=-0.003 Sum_probs=79.6
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHH
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 397 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 397 (423)
...+...|..++..|++++|+..|+++++.+|. +..++.++|.++..+|++++|+..++++++++|++..+++.+|.++
T Consensus 50 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~ 128 (133)
T 2lni_A 50 AKLYSNRAACYTKLLEFQLALKDCEECIQLEPT-FIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQRCM 128 (133)
T ss_dssp HHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-chHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHH
Confidence 456778899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCC
Q 014484 398 FSLGM 402 (423)
Q Consensus 398 ~~~~~ 402 (423)
..+|+
T Consensus 129 ~~~~~ 133 (133)
T 2lni_A 129 MAQYN 133 (133)
T ss_dssp HHHTC
T ss_pred HHhcC
Confidence 88774
|
| >3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans} | Back alignment and structure |
|---|
Probab=99.12 E-value=8.1e-10 Score=101.47 Aligned_cols=101 Identities=8% Similarity=-0.027 Sum_probs=94.7
Q ss_pred HHHHHHHHHHHhcC--CHHHHHHHHHHHhcCCCCCcHHHHhhHHHHH----Hhc---CChHHHHHHHHHhHhcCCCchHH
Q 014484 319 LNSKKHGDTAFRAK--DFSTAIDCYTQFIDGGTMVSPTVYARRCLSY----LMN---DMPQEALGDAMQAQVVSPDWPTA 389 (423)
Q Consensus 319 ~~~~~~g~~~~~~~--~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~----~~~---~~~~~A~~~~~~a~~l~p~~~~a 389 (423)
..+..+|......| ++++|+++++++|..+|+ +..+|+.|+.++ ..+ +++++++..++++++.+|.+..+
T Consensus 68 taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk-~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pkny~a 146 (306)
T 3dra_A 68 TIWIYRFNILKNLPNRNLYDELDWCEEIALDNEK-NYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPKNHHV 146 (306)
T ss_dssp HHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTT-CCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcc-cHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCCCHHH
Confidence 36677888888888 999999999999999999 999999999999 777 88999999999999999999999
Q ss_pred HHHHHHHHHhCCChH--HHHHHHHHhhcccccc
Q 014484 390 LYLQAACLFSLGMEN--DARETLKDGTNLEAKK 420 (423)
Q Consensus 390 ~~~~g~~~~~~~~~~--~A~~~~~~al~l~~~~ 420 (423)
|+.++.++..+|+++ ++++.++++++.||.+
T Consensus 147 W~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N 179 (306)
T 3dra_A 147 WSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKN 179 (306)
T ss_dssp HHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHhcccChHHHHHHHHHHHHhCCCC
Confidence 999999999999999 9999999999999875
|
| >3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.11 E-value=3.6e-10 Score=103.68 Aligned_cols=100 Identities=12% Similarity=-0.015 Sum_probs=87.2
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHH--HHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHH
Q 014484 320 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRC--LSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 397 (423)
Q Consensus 320 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~--~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 397 (423)
.+...|..+.+.|++++|++.|+++++.+|+ +.......+ ..+...|++++|+..++++++.+|+++.+|+++|.++
T Consensus 132 ~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~-~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~ 210 (291)
T 3mkr_A 132 CMAMTVQILLKLDRLDLARKELKKMQDQDED-ATLTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSPTLLLLNGQAACH 210 (291)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhhCcC-cHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 4556789999999999999999999999998 654433333 2333558999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHhhcccccc
Q 014484 398 FSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 398 ~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
..+|++++|++.|++|++++|.+
T Consensus 211 ~~~g~~~eA~~~l~~al~~~p~~ 233 (291)
T 3mkr_A 211 MAQGRWEAAEGVLQEALDKDSGH 233 (291)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHcCCHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999874
|
| >2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.10 E-value=7.4e-11 Score=110.72 Aligned_cols=100 Identities=15% Similarity=0.027 Sum_probs=59.2
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHH-HH
Q 014484 320 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC-LF 398 (423)
Q Consensus 320 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~-~~ 398 (423)
.+...|..+++.|+|++|+..|+++|+++|+ +..+|+++|.+|..+|++++|+.++++|++++|++..++..++.+ ..
T Consensus 232 ~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~ 310 (338)
T 2if4_A 232 CHLNIAACLIKLKRYDEAIGHCNIVLTEEEK-NPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQ 310 (338)
T ss_dssp HHHHHHHHHHTTTCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHTTC------------------
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Confidence 5678899999999999999999999999999 999999999999999999999999999999999999999999998 55
Q ss_pred hCCChHHHHHHHHHhhcccccc
Q 014484 399 SLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 399 ~~~~~~~A~~~~~~al~l~~~~ 420 (423)
..+.+++|.+.|+++++.+|.+
T Consensus 311 ~~~~~~~a~~~~~~~l~~~p~~ 332 (338)
T 2if4_A 311 EKALYQKQKEMYKGIFKGKDEG 332 (338)
T ss_dssp ----------------------
T ss_pred HHHHHHHHHHHHHHhhCCCCCC
Confidence 5677889999999999998874
|
| >2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.10 E-value=2.9e-10 Score=87.40 Aligned_cols=69 Identities=17% Similarity=0.121 Sum_probs=66.6
Q ss_pred cHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 014484 352 SPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
+..++.++|.++...|+|++|+..+++|++++|+++.+|+++|.++..+|++++|++.|+++++++|..
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 71 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTA 71 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSST
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc
Confidence 567899999999999999999999999999999999999999999999999999999999999999875
|
| >3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A | Back alignment and structure |
|---|
Probab=99.08 E-value=2.4e-10 Score=104.79 Aligned_cols=102 Identities=14% Similarity=0.144 Sum_probs=88.3
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHhcC-------CCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCc---
Q 014484 317 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDG-------GTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW--- 386 (423)
Q Consensus 317 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~-------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~--- 386 (423)
.+..+...|..++..|+|++|+..|++|++. .+. ...+++|+|.+|.++|+|++|+..+++|+++.+..
T Consensus 154 ~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~-~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~ 232 (293)
T 3u3w_A 154 NLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEF-DVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSM 232 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBC
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhH-HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcH
Confidence 3445778999999999999999999999942 223 45799999999999999999999999999886544
Q ss_pred ---hHHHHHHHHHHHhCCC-hHHHHHHHHHhhccccc
Q 014484 387 ---PTALYLQAACLFSLGM-ENDARETLKDGTNLEAK 419 (423)
Q Consensus 387 ---~~a~~~~g~~~~~~~~-~~~A~~~~~~al~l~~~ 419 (423)
+.+|+++|.++..+|+ +++|++.|++|+++...
T Consensus 233 ~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~~~ 269 (293)
T 3u3w_A 233 ALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDI 269 (293)
T ss_dssp TTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHH
Confidence 8899999999999995 69999999999977544
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=99.07 E-value=5.2e-10 Score=105.83 Aligned_cols=131 Identities=12% Similarity=0.108 Sum_probs=97.0
Q ss_pred CCCCccceeeeecceeeeeecC--CCh--hhHHHHHHHHHHHhcCC--CCCccceEeEEEeC---CceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICWFHCHLKSSVLE--SSD--LGETLNLEEAKAVGNLR--SERLANLIGCCYEA---DERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~~~~~~~~~~~~--~~~--~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~---~~~~lv~e~~~~~~L 72 (423)
|.++.||.....+..+.+++.. ... .....+.+|+.+++.|. +..+++++.++.+. +..|+||||++|.++
T Consensus 49 G~sn~~y~v~~~~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~v~G~~l 128 (359)
T 3dxp_A 49 GQSNPTFKLVTPGQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEFVSGRVL 128 (359)
T ss_dssp -CCSCEEEEECSSCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEECCCCBCC
T ss_pred cccceEEEEEECCceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEecCCeec
Confidence 5567778776655555555544 222 12347788999999996 45689999998876 347899999999887
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHc-----------------------------------------------
Q 014484 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSS----------------------------------------------- 105 (423)
Q Consensus 73 ~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~----------------------------------------------- 105 (423)
.+.. -..++......++.+++..|..||+
T Consensus 129 ~~~~----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 204 (359)
T 3dxp_A 129 WDQS----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDSLMDWL 204 (359)
T ss_dssp CCTT----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHHHHHHHG
T ss_pred CCCc----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHHHHHHHH
Confidence 5422 2247888889999999999999997
Q ss_pred -----------CCCeeeccCCCCCeeecCCCC--eEEcccccccc
Q 014484 106 -----------KGRALYHDLNAYRILFDKDGN--PRLSSFGLMKN 137 (423)
Q Consensus 106 -----------~~~iiH~dlkp~Nill~~~~~--~kl~Dfg~~~~ 137 (423)
.+ ++|||++|.||+++.++. +.|+||+.+..
T Consensus 205 ~~~~~~~~~~~~~-lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 205 PQHIPQEDADLTS-IVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp GGCCCSTTSSCCE-EECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HhcCCCccCCCce-EEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 24 999999999999987753 58999998753
|
| >1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A | Back alignment and structure |
|---|
Probab=99.06 E-value=4.2e-10 Score=110.09 Aligned_cols=91 Identities=14% Similarity=0.154 Sum_probs=82.9
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHH
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 397 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 397 (423)
...+...|..+++.|+|++|+..|++||+++|+ +..+|+++|.+|..+|+|++|+.+|++|++++|++..++..+|.++
T Consensus 317 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~ 395 (457)
T 1kt0_A 317 LAAFLNLAMCYLKLREYTKAVECCDKALGLDSA-NEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQ 395 (457)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCc-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 456778999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHH
Q 014484 398 FSLGMENDARET 409 (423)
Q Consensus 398 ~~~~~~~~A~~~ 409 (423)
..++++++|.+.
T Consensus 396 ~~~~~~~~a~~~ 407 (457)
T 1kt0_A 396 KKAKEHNERDRR 407 (457)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999988754
|
| >3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A | Back alignment and structure |
|---|
Probab=99.06 E-value=6.4e-10 Score=110.39 Aligned_cols=102 Identities=14% Similarity=0.064 Sum_probs=96.5
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHH
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 397 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 397 (423)
...+...|..++..|++++|+..|+++++.+|. +..++.++|.++...|++++|+..++++++++|+++.+++.+|.++
T Consensus 310 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 388 (537)
T 3fp2_A 310 PPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPE-NVYPYIQLACLLYKQGKFTESEAFFNETKLKFPTLPEVPTFFAEIL 388 (537)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHH
Confidence 345778899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHhhcccccc
Q 014484 398 FSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 398 ~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
..+|++++|++.|+++++++|..
T Consensus 389 ~~~g~~~~A~~~~~~a~~~~~~~ 411 (537)
T 3fp2_A 389 TDRGDFDTAIKQYDIAKRLEEVQ 411 (537)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHC
T ss_pred HHhCCHHHHHHHHHHHHHcCCcc
Confidence 99999999999999999988764
|
| >1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A | Back alignment and structure |
|---|
Probab=99.06 E-value=4.4e-10 Score=83.00 Aligned_cols=73 Identities=16% Similarity=0.155 Sum_probs=67.2
Q ss_pred CCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 014484 348 GTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 348 ~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
+|..+..+++++|.++...|++++|+..++++++++|+++.+++++|.++..+|++++|+..|+++++++|..
T Consensus 4 ~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~ 76 (91)
T 1na3_A 4 DPGNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN 76 (91)
T ss_dssp --CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred cccccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCC
Confidence 4443678999999999999999999999999999999999999999999999999999999999999998864
|
| >2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.06 E-value=3.5e-10 Score=97.24 Aligned_cols=97 Identities=12% Similarity=0.076 Sum_probs=83.4
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHH
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 397 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 397 (423)
...+...|..++..|+|++|+..|+++++++|. +..+++++|.+|..+|++++|+..++++++++|++..++..++.++
T Consensus 88 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 166 (198)
T 2fbn_A 88 ISCNLNLATCYNKNKDYPKAIDHASKVLKIDKN-NVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCV 166 (198)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHH
Confidence 345677899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHH-HHHHHhhc
Q 014484 398 FSLGMENDAR-ETLKDGTN 415 (423)
Q Consensus 398 ~~~~~~~~A~-~~~~~al~ 415 (423)
..+++++++. ..|.+.+.
T Consensus 167 ~~~~~~~~~~~~~~~~~f~ 185 (198)
T 2fbn_A 167 NKLKEARKKDKLTFGGMFD 185 (198)
T ss_dssp HHHHHHHC-----------
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 9999999888 55555543
|
| >2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.05 E-value=9.4e-10 Score=86.64 Aligned_cols=86 Identities=14% Similarity=0.025 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHH
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 397 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 397 (423)
...+...|..++..|++++|+..|.++++.+|. +..++.++|.++..+|++++|+..++++++++|+++.+++.+|.++
T Consensus 46 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~ 124 (131)
T 2vyi_A 46 AVYFCNRAAAYSKLGNYAGAVQDCERAICIDPA-YSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIAE 124 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhchHHHHHHHHHHHhcCcc-CHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCccchHHHHHHHHHH
Confidence 345677899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChH
Q 014484 398 FSLGMEN 404 (423)
Q Consensus 398 ~~~~~~~ 404 (423)
..+|+++
T Consensus 125 ~~~~~~~ 131 (131)
T 2vyi_A 125 LKLREAP 131 (131)
T ss_dssp HHHTTCC
T ss_pred HHHhcCC
Confidence 9999874
|
| >4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.05 E-value=6.4e-10 Score=108.72 Aligned_cols=97 Identities=8% Similarity=-0.003 Sum_probs=50.2
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHhcC---------CCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhc--------CC
Q 014484 322 KKHGDTAFRAKDFSTAIDCYTQFIDG---------GTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVV--------SP 384 (423)
Q Consensus 322 ~~~g~~~~~~~~~~~A~~~~~~ai~~---------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l--------~p 384 (423)
...|..++.+|+|++|++.|++|+++ +|. ....|.|+|.+|..+|++++|+.++++++++ .+
T Consensus 55 n~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~-~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~~ 133 (472)
T 4g1t_A 55 NLLAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIR-SLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPYRI 133 (472)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTT-THHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchH-HHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccccch
Confidence 34455555555555555555555543 343 4455555555555555555555555555544 22
Q ss_pred CchHHHHHHHHHHHhC--CChHHHHHHHHHhhccccc
Q 014484 385 DWPTALYLQAACLFSL--GMENDARETLKDGTNLEAK 419 (423)
Q Consensus 385 ~~~~a~~~~g~~~~~~--~~~~~A~~~~~~al~l~~~ 419 (423)
+.+..+.++|.++..+ ++|++|++.|++|++++|.
T Consensus 134 ~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~ 170 (472)
T 4g1t_A 134 ESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPK 170 (472)
T ss_dssp CCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTT
T ss_pred hhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCC
Confidence 3444555555544433 2455555555555555554
|
| >3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.04 E-value=9.7e-10 Score=85.86 Aligned_cols=85 Identities=9% Similarity=-0.060 Sum_probs=73.8
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHH
Q 014484 316 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAA 395 (423)
Q Consensus 316 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~ 395 (423)
.....+...|..++..|+|++|+..|+++++++|+ +..+++++|.++..+|++++|+..++++++++|+++........
T Consensus 25 ~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~a 103 (117)
T 3k9i_A 25 DLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPN-HQALRVFYAMVLYNLGRYEQGVELLLKIIAETSDDETIQSYKQA 103 (117)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHTHHH
T ss_pred cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-chHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 34556778999999999999999999999999999 99999999999999999999999999999999999887654443
Q ss_pred HHHhCC
Q 014484 396 CLFSLG 401 (423)
Q Consensus 396 ~~~~~~ 401 (423)
+....+
T Consensus 104 i~~~~~ 109 (117)
T 3k9i_A 104 ILFYAD 109 (117)
T ss_dssp HHHHTT
T ss_pred HHHHHH
Confidence 333333
|
| >3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A | Back alignment and structure |
|---|
Probab=99.04 E-value=4.1e-10 Score=101.41 Aligned_cols=102 Identities=11% Similarity=-0.007 Sum_probs=93.9
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHhcC--------CCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhc------
Q 014484 317 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDG--------GTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVV------ 382 (423)
Q Consensus 317 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~--------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l------ 382 (423)
....+...|..+...|++++|+..|.+++++ +|. ...++.++|.+|..+|++++|+..+++++++
T Consensus 84 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 162 (283)
T 3edt_B 84 VAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPD-VAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLG 162 (283)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHH-HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcC
Confidence 3456778899999999999999999999988 466 7899999999999999999999999999999
Q ss_pred --CCCchHHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 014484 383 --SPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAK 419 (423)
Q Consensus 383 --~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 419 (423)
.|....+++.+|.++..+|++++|+..|++++++.+.
T Consensus 163 ~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~~ 201 (283)
T 3edt_B 163 PDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRAHE 201 (283)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 8888999999999999999999999999999987543
|
| >2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646} | Back alignment and structure |
|---|
Probab=99.03 E-value=8.6e-10 Score=101.09 Aligned_cols=102 Identities=14% Similarity=0.131 Sum_probs=88.5
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHh---cCCCCCcH----HHHhhHHHHHHhcCChHHHHHHHHHhHhcCCC----
Q 014484 317 ETLNSKKHGDTAFRAKDFSTAIDCYTQFI---DGGTMVSP----TVYARRCLSYLMNDMPQEALGDAMQAQVVSPD---- 385 (423)
Q Consensus 317 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai---~~~p~~~~----~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~---- 385 (423)
.+..+...|..++..|+|++|+..|++|+ +..|. +. .+++|+|.+|..+|+|++|+..+++|+++.++
T Consensus 154 ~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~-~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~ 232 (293)
T 2qfc_A 154 NLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHD-NEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSM 232 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBC
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCc-cccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcH
Confidence 35567789999999999999999999999 44554 32 69999999999999999999999999988643
Q ss_pred --chHHHHHHHHHHHhCCChHHH-HHHHHHhhccccc
Q 014484 386 --WPTALYLQAACLFSLGMENDA-RETLKDGTNLEAK 419 (423)
Q Consensus 386 --~~~a~~~~g~~~~~~~~~~~A-~~~~~~al~l~~~ 419 (423)
.+.+|+++|.+|..+|++++| ...|++|+++...
T Consensus 233 ~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~~~ 269 (293)
T 2qfc_A 233 ALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDI 269 (293)
T ss_dssp SSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHH
Confidence 378999999999999999999 7789999976543
|
| >2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.03 E-value=1.1e-09 Score=110.35 Aligned_cols=100 Identities=16% Similarity=0.127 Sum_probs=85.9
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhcC------CCCCc-HHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHH
Q 014484 320 NSKKHGDTAFRAKDFSTAIDCYTQFIDG------GTMVS-PTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYL 392 (423)
Q Consensus 320 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~------~p~~~-~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~ 392 (423)
.+...|..+.+.|++++|++.|+++++. +|+ + ..+|.++|.+|.+.|++++|+..++++++++|+++.+|+.
T Consensus 477 ~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~-~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~ 555 (597)
T 2xpi_A 477 LLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEK-PWAATWANLGHAYRKLKMYDAAIDALNQGLLLSTNDANVHTA 555 (597)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSG-GGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSCCHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchh-hHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHH
Confidence 4667788888888899999999888887 565 3 6788889999999999999999999999999988899999
Q ss_pred HHHHHHhCCChHHHHHHHHHhhcccccc
Q 014484 393 QAACLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 393 ~g~~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
+|.+|..+|++++|++.|+++++++|.+
T Consensus 556 l~~~~~~~g~~~~A~~~~~~~l~~~p~~ 583 (597)
T 2xpi_A 556 IALVYLHKKIPGLAITHLHESLAISPNE 583 (597)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHhCCHHHHHHHHHHHHhcCCCC
Confidence 9999999999999999999999888864
|
| >3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A | Back alignment and structure |
|---|
Probab=99.02 E-value=7.4e-10 Score=99.73 Aligned_cols=99 Identities=10% Similarity=-0.022 Sum_probs=91.5
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHhcC--------CCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhc------
Q 014484 317 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDG--------GTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVV------ 382 (423)
Q Consensus 317 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~--------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l------ 382 (423)
.+..+...|..++..|++++|+..|++++++ +|. ...++.++|.+|..+|++++|+..+++++++
T Consensus 42 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~ 120 (283)
T 3edt_B 42 VATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPA-VAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLG 120 (283)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHH-HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchH-HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcC
Confidence 4556778999999999999999999999977 355 6789999999999999999999999999998
Q ss_pred --CCCchHHHHHHHHHHHhCCChHHHHHHHHHhhcc
Q 014484 383 --SPDWPTALYLQAACLFSLGMENDARETLKDGTNL 416 (423)
Q Consensus 383 --~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l 416 (423)
+|....+++++|.++..+|++++|+..|++++++
T Consensus 121 ~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 156 (283)
T 3edt_B 121 KFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEI 156 (283)
T ss_dssp TTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 6888999999999999999999999999999987
|
| >2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646} | Back alignment and structure |
|---|
Probab=99.02 E-value=2.6e-09 Score=97.87 Aligned_cols=100 Identities=9% Similarity=0.013 Sum_probs=86.3
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCC-----cHHHHhhHHHHHHhcCChHHHHHHHHHhH---hcCCCch----
Q 014484 320 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMV-----SPTVYARRCLSYLMNDMPQEALGDAMQAQ---VVSPDWP---- 387 (423)
Q Consensus 320 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-----~~~~~~~~~~~~~~~~~~~~A~~~~~~a~---~l~p~~~---- 387 (423)
.....|..+...|++++|+..|.+|++..+.. ...+++++|.+|..+|+|++|+..+++|+ +..|++.
T Consensus 117 ~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~ 196 (293)
T 2qfc_A 117 WQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDV 196 (293)
T ss_dssp HHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHH
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchH
Confidence 34557888889999999999999999876541 15699999999999999999999999999 5566633
Q ss_pred HHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 014484 388 TALYLQAACLFSLGMENDARETLKDGTNLEAK 419 (423)
Q Consensus 388 ~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 419 (423)
.+++++|.+|..+|+|++|++.|++|+++.+.
T Consensus 197 ~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~ 228 (293)
T 2qfc_A 197 KVRYNHAKALYLDSRYEESLYQVNKAIEISCR 228 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHh
Confidence 69999999999999999999999999988654
|
| >3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.02 E-value=5.2e-10 Score=92.84 Aligned_cols=87 Identities=9% Similarity=-0.057 Sum_probs=78.0
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCch-HHHHHHHHH
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWP-TALYLQAAC 396 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~-~a~~~~g~~ 396 (423)
...+...|..++..|+|++|+..|+++|+++|. +..+|+++|.+|..+|++++|+.++++|++++|+++ .+...++.+
T Consensus 63 ~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~-~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~ 141 (162)
T 3rkv_A 63 IPLYANMSQCYLNIGDLHEAEETSSEVLKREET-NEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIV 141 (162)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHhcCCc-chHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 346778999999999999999999999999999 999999999999999999999999999999999999 667778877
Q ss_pred HHhCCChHH
Q 014484 397 LFSLGMEND 405 (423)
Q Consensus 397 ~~~~~~~~~ 405 (423)
...++++.+
T Consensus 142 ~~~~~~~~~ 150 (162)
T 3rkv_A 142 TERRAEKKA 150 (162)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHHH
Confidence 766655443
|
| >3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus} | Back alignment and structure |
|---|
Probab=99.02 E-value=9.5e-10 Score=91.43 Aligned_cols=81 Identities=5% Similarity=-0.147 Sum_probs=76.1
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHH
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 397 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 397 (423)
...+...|..++..|+|++|+..|+++++++|+ +..+|+++|.+|..+|++++|+..++++++++|++..+|+++|.+.
T Consensus 45 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~ 123 (164)
T 3sz7_A 45 PIYLSNRAAAYSASGQHEKAAEDAELATVVDPK-YSKAWSRLGLARFDMADYKGAKEAYEKGIEAEGNGGSDAMKRGLET 123 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSSSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHHHHH
Confidence 456778999999999999999999999999999 9999999999999999999999999999999999999999998876
Q ss_pred Hh
Q 014484 398 FS 399 (423)
Q Consensus 398 ~~ 399 (423)
..
T Consensus 124 ~~ 125 (164)
T 3sz7_A 124 TK 125 (164)
T ss_dssp HH
T ss_pred HH
Confidence 54
|
| >2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=99.01 E-value=1.7e-09 Score=99.83 Aligned_cols=96 Identities=10% Similarity=-0.026 Sum_probs=45.9
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHH-HHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHH-h
Q 014484 322 KKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPT-VYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLF-S 399 (423)
Q Consensus 322 ~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~-~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~-~ 399 (423)
...|..+...|++++|...|+++++++|. +.. +|.++|.++.+.|++++|+..|++|++++|....+|...|.... .
T Consensus 103 ~~~~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~a~~~~~~ 181 (308)
T 2ond_A 103 FAYADYEESRMKYEKVHSIYNRLLAIEDI-DPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYC 181 (308)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTSSSS-CTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHhcccc-CccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 34444444445555555555555555554 443 45555555555555555555555555555544444443333322 1
Q ss_pred CCChHHHHHHHHHhhcccc
Q 014484 400 LGMENDARETLKDGTNLEA 418 (423)
Q Consensus 400 ~~~~~~A~~~~~~al~l~~ 418 (423)
+|++++|++.|++|++++|
T Consensus 182 ~~~~~~A~~~~~~al~~~p 200 (308)
T 2ond_A 182 SKDKSVAFKIFELGLKKYG 200 (308)
T ss_dssp SCCHHHHHHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHHHHhCC
Confidence 4555555555555554444
|
| >2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.01 E-value=3.8e-09 Score=106.39 Aligned_cols=100 Identities=11% Similarity=-0.103 Sum_probs=89.6
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHH
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 397 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 397 (423)
...+...|..+.+.|++++|++.|+++++.+|. +..++..++.+|.+.|++++|++.++++++++|+++.+|+.+|.+|
T Consensus 407 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 485 (597)
T 2xpi_A 407 GPAWIGFAHSFAIEGEHDQAISAYTTAARLFQG-THLPYLFLGMQHMQLGNILLANEYLQSSYALFQYDPLLLNELGVVA 485 (597)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTT-CSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-chHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHH
Confidence 346667888899999999999999999999998 8899999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHhhcccc
Q 014484 398 FSLGMENDARETLKDGTNLEA 418 (423)
Q Consensus 398 ~~~~~~~~A~~~~~~al~l~~ 418 (423)
...|++++|++.|++++++.|
T Consensus 486 ~~~g~~~~A~~~~~~~~~~~~ 506 (597)
T 2xpi_A 486 FNKSDMQTAINHFQNALLLVK 506 (597)
T ss_dssp HHTTCHHHHHHHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHHHhhh
Confidence 999999999999999998854
|
| >1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A | Back alignment and structure |
|---|
Probab=99.01 E-value=1.3e-09 Score=103.34 Aligned_cols=92 Identities=14% Similarity=0.127 Sum_probs=87.1
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHH
Q 014484 317 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 396 (423)
Q Consensus 317 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~ 396 (423)
....+...|..+++.|+|++|+..|++|++++|+ +..+|+++|.+|..+|++++|+.++++|++++|++..++..++.+
T Consensus 272 ~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~ 350 (370)
T 1ihg_A 272 ALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPS-NTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKV 350 (370)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCch-hHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 4457788999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHH
Q 014484 397 LFSLGMENDARET 409 (423)
Q Consensus 397 ~~~~~~~~~A~~~ 409 (423)
+..++++++|.+.
T Consensus 351 ~~~~~~~~~a~k~ 363 (370)
T 1ihg_A 351 KQKIKAQKDKEKA 363 (370)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988764
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.00 E-value=1.3e-09 Score=109.14 Aligned_cols=100 Identities=4% Similarity=-0.131 Sum_probs=93.9
Q ss_pred HHHHHHHHHHhcCC----------HHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcC--ChHHHHHHHHHhHhcCCCch
Q 014484 320 NSKKHGDTAFRAKD----------FSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMND--MPQEALGDAMQAQVVSPDWP 387 (423)
Q Consensus 320 ~~~~~g~~~~~~~~----------~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~--~~~~A~~~~~~a~~l~p~~~ 387 (423)
.+..+|......|+ +++|+++++++++.+|+ ++.+|++|+.++.+++ ++++|+++++++++++|+|.
T Consensus 65 aW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK-~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~N~ 143 (567)
T 1dce_A 65 LWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPK-SYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNF 143 (567)
T ss_dssp HHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhccccc
Confidence 56667777777777 99999999999999999 9999999999999999 67999999999999999999
Q ss_pred HHHHHHHHHHHhCC-ChHHHHHHHHHhhcccccc
Q 014484 388 TALYLQAACLFSLG-MENDARETLKDGTNLEAKK 420 (423)
Q Consensus 388 ~a~~~~g~~~~~~~-~~~~A~~~~~~al~l~~~~ 420 (423)
.||+.+|.++..+| .+++|+++++++++++|.+
T Consensus 144 ~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n 177 (567)
T 1dce_A 144 HCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSN 177 (567)
T ss_dssp HHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCC
T ss_pred cHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCC
Confidence 99999999999999 9999999999999999975
|
| >2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio} | Back alignment and structure |
|---|
Probab=99.00 E-value=5.9e-10 Score=103.02 Aligned_cols=102 Identities=10% Similarity=0.004 Sum_probs=89.5
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCC-----cHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCc-----
Q 014484 317 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMV-----SPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW----- 386 (423)
Q Consensus 317 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-----~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~----- 386 (423)
.+..+...|..+.. |+|++|+..|++|+++.|.. ...++.++|.+|..+|+|++|+..+++++++.|++
T Consensus 115 ~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 193 (307)
T 2ifu_A 115 AAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYPT 193 (307)
T ss_dssp HHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChhH
Confidence 34567778999988 99999999999999987651 15789999999999999999999999999987654
Q ss_pred -hHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 014484 387 -PTALYLQAACLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 387 -~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
..+++++|.++..+|++++|+..|++++ ++|..
T Consensus 194 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~ 227 (307)
T 2ifu_A 194 CYKKCIAQVLVQLHRADYVAAQKCVRESY-SIPGF 227 (307)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTS
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCC
Confidence 3589999999999999999999999999 98863
|
| >2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.00 E-value=8.1e-10 Score=93.08 Aligned_cols=82 Identities=13% Similarity=-0.015 Sum_probs=77.0
Q ss_pred CHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCc--hHHHHHHHHHHHhCCChHHHHHHH
Q 014484 333 DFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW--PTALYLQAACLFSLGMENDARETL 410 (423)
Q Consensus 333 ~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~--~~a~~~~g~~~~~~~~~~~A~~~~ 410 (423)
+..+|+..|+++++.+|+ +..+++++|.++...|++++|+..++++++++|++ +.+++++|.++..+|++++|+..|
T Consensus 89 ~~~~a~~~~~~al~~~P~-~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~~~y 167 (176)
T 2r5s_A 89 AESPELKRLEQELAANPD-NFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIASKY 167 (176)
T ss_dssp TSCHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHHHHH
T ss_pred ccchHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHHHHH
Confidence 345689999999999999 99999999999999999999999999999999986 569999999999999999999999
Q ss_pred HHhhc
Q 014484 411 KDGTN 415 (423)
Q Consensus 411 ~~al~ 415 (423)
++++.
T Consensus 168 ~~al~ 172 (176)
T 2r5s_A 168 RRQLY 172 (176)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99984
|
| >2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=99.00 E-value=1.1e-09 Score=83.86 Aligned_cols=72 Identities=13% Similarity=0.063 Sum_probs=69.3
Q ss_pred CCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 014484 347 GGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAK 419 (423)
Q Consensus 347 ~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 419 (423)
++|+ +..++.++|.++...|++++|+..++++++++|+++.+++++|.++..+|++++|++.|+++++++|.
T Consensus 1 l~p~-~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~ 72 (112)
T 2kck_A 1 MVDQ-NPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIED 72 (112)
T ss_dssp CCCS-STTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCC
T ss_pred CCCC-cHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcc
Confidence 4688 89999999999999999999999999999999999999999999999999999999999999999886
|
| >3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.00 E-value=9.1e-10 Score=90.14 Aligned_cols=99 Identities=11% Similarity=0.113 Sum_probs=61.6
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCC-----cHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCc------hH
Q 014484 320 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMV-----SPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW------PT 388 (423)
Q Consensus 320 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-----~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~------~~ 388 (423)
.+...|..++..|++++|+..|++++++.+.. ...++.++|.++...|++++|+..+++++++.+.. +.
T Consensus 51 ~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~ 130 (164)
T 3ro3_A 51 AYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGR 130 (164)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHH
Confidence 44556666666667777777776666654320 13466666666666777777777776666654332 34
Q ss_pred HHHHHHHHHHhCCChHHHHHHHHHhhcccc
Q 014484 389 ALYLQAACLFSLGMENDARETLKDGTNLEA 418 (423)
Q Consensus 389 a~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 418 (423)
+++.+|.++..+|++++|++.+++++++..
T Consensus 131 ~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 160 (164)
T 3ro3_A 131 ACWSLGNAYTALGNHDQAMHFAEKHLEISR 160 (164)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHHHH
Confidence 566666667777777777777766666544
|
| >3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.99 E-value=8.3e-10 Score=101.07 Aligned_cols=102 Identities=11% Similarity=-0.034 Sum_probs=92.8
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHhcC--------CCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhc------
Q 014484 317 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDG--------GTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVV------ 382 (423)
Q Consensus 317 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~--------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l------ 382 (423)
....+...|..++..|++++|+..|++++++ .|. ...++.++|.+|..+|++++|+..+++++++
T Consensus 152 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 230 (311)
T 3nf1_A 152 VAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPN-VAKTKNNLASCYLKQGKFKQAETLYKEILTRAHEREF 230 (311)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHH-HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcC
Confidence 4456778899999999999999999999988 666 7889999999999999999999999999974
Q ss_pred -------------------------------------------CCCchHHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 014484 383 -------------------------------------------SPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAK 419 (423)
Q Consensus 383 -------------------------------------------~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 419 (423)
+|..+.+++.+|.+|..+|++++|++.|++|+++.|+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~l~~~ 310 (311)
T 3nf1_A 231 GSVDDENKPIWMHAEEREECKGKQKDGTSFGEYGGWYKACKVDSPTVTTTLKNLGALYRRQGKFEAAETLEEAAMRSRKQ 310 (311)
T ss_dssp C------CCHHHHHHHHHHC-------CCSCCCC---------CHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHC-
T ss_pred CCCCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhc
Confidence 5778899999999999999999999999999998775
|
| >3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.99 E-value=2.2e-09 Score=84.79 Aligned_cols=82 Identities=12% Similarity=0.003 Sum_probs=76.8
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcC------CCchHHHH
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVS------PDWPTALY 391 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~------p~~~~a~~ 391 (423)
...+...|..++..|+|++|+..|+++++++|+ +..+|+++|.++..+|++++|+..++++++++ |++..++.
T Consensus 38 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~~ 116 (126)
T 3upv_A 38 ARGYSNRAAALAKLMSFPEAIADCNKAIEKDPN-FVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQ 116 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHH
T ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhCcccCCchhHHHHHH
Confidence 456778999999999999999999999999999 99999999999999999999999999999999 99999999
Q ss_pred HHHHHHHhC
Q 014484 392 LQAACLFSL 400 (423)
Q Consensus 392 ~~g~~~~~~ 400 (423)
.++.+...+
T Consensus 117 ~l~~~~~~l 125 (126)
T 3upv_A 117 LYYKASQQR 125 (126)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhh
Confidence 999887654
|
| >3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A | Back alignment and structure |
|---|
Probab=98.98 E-value=1.1e-09 Score=100.32 Aligned_cols=101 Identities=8% Similarity=-0.033 Sum_probs=86.3
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCC-c----HHHHhhHHHHHHhcCChHHHHHHHHHhHh-------cCCCch
Q 014484 320 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMV-S----PTVYARRCLSYLMNDMPQEALGDAMQAQV-------VSPDWP 387 (423)
Q Consensus 320 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-~----~~~~~~~~~~~~~~~~~~~A~~~~~~a~~-------l~p~~~ 387 (423)
.+...|..+...|++++|+..|++|+++.+.. + ..+++++|.+|..+|+|++|+..+++|++ ..+..+
T Consensus 117 ~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 196 (293)
T 3u3w_A 117 WQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDV 196 (293)
T ss_dssp HHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHH
T ss_pred HHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHH
Confidence 44457888889999999999999999865441 1 34799999999999999999999999994 334556
Q ss_pred HHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 014484 388 TALYLQAACLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 388 ~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
.+++++|.+|..+|+|++|++.+++|+++.++.
T Consensus 197 ~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~ 229 (293)
T 3u3w_A 197 KVRYNHAKALYLDSRYEESLYQVNKAIEISCRI 229 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHc
Confidence 799999999999999999999999999887654
|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.98 E-value=9.3e-10 Score=108.38 Aligned_cols=100 Identities=13% Similarity=0.021 Sum_probs=91.5
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHH------HHhhHHHHHHh---cCChHHHHHHHHHhHhcCCCchHHH
Q 014484 320 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPT------VYARRCLSYLM---NDMPQEALGDAMQAQVVSPDWPTAL 390 (423)
Q Consensus 320 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~------~~~~~~~~~~~---~~~~~~A~~~~~~a~~l~p~~~~a~ 390 (423)
.+...|..++..|++++|+..|+++++.+|. +.. ++.++|.++.. .|++++|+..++++++++|+++.++
T Consensus 374 ~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~ 452 (514)
T 2gw1_A 374 VPNFFAEILTDKNDFDKALKQYDLAIELENK-LDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKASKLDPRSEQAK 452 (514)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHT-SSSCSSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhhhc-cchHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHhCcccHHHH
Confidence 5667889999999999999999999999888 644 99999999999 9999999999999999999999999
Q ss_pred HHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 014484 391 YLQAACLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 391 ~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
+.+|.++..+|++++|++.|+++++++|..
T Consensus 453 ~~la~~~~~~g~~~~A~~~~~~a~~~~~~~ 482 (514)
T 2gw1_A 453 IGLAQMKLQQEDIDEAITLFEESADLARTM 482 (514)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCSSH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHhcccc
Confidence 999999999999999999999999998864
|
| >3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.98 E-value=1.9e-09 Score=99.37 Aligned_cols=102 Identities=14% Similarity=0.111 Sum_probs=93.4
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCc----HHHHhhHHHHHHhcCChHHHHHHHHHhHhc------CCCch
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVS----PTVYARRCLSYLMNDMPQEALGDAMQAQVV------SPDWP 387 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~----~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l------~p~~~ 387 (423)
...+...|..++..|++++|+..|+++++.+|. + ..++.++|.++...|++++|+..+++++++ .|..+
T Consensus 5 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 83 (338)
T 3ro2_A 5 CLELALEGERLCKSGDCRAGVSFFEAAVQVGTE-DLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEA 83 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhhCcc-cHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHHH
Confidence 446778899999999999999999999999998 6 478999999999999999999999999988 66778
Q ss_pred HHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 014484 388 TALYLQAACLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 388 ~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
.+++.+|.++..+|++++|++.|++++++.+..
T Consensus 84 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 116 (338)
T 3ro2_A 84 KASGNLGNTLKVLGNFDEAIVCCQRHLDISREL 116 (338)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHh
Confidence 899999999999999999999999999887653
|
| >3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.98 E-value=1.4e-09 Score=103.48 Aligned_cols=103 Identities=16% Similarity=0.120 Sum_probs=92.0
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCC-----cHHHHhhHHHHHHhcCChHHHHHHHHHhHh-----cC-CC
Q 014484 317 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMV-----SPTVYARRCLSYLMNDMPQEALGDAMQAQV-----VS-PD 385 (423)
Q Consensus 317 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-----~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~-----l~-p~ 385 (423)
.+..+...|..+...|+|++|+..|.+|+++.+.. ...++.++|.+|..+|++++|+..+++|++ .+ |.
T Consensus 183 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~ 262 (383)
T 3ulq_A 183 LLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPS 262 (383)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGG
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchh
Confidence 45567788999999999999999999999876541 236899999999999999999999999999 56 88
Q ss_pred chHHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 014484 386 WPTALYLQAACLFSLGMENDARETLKDGTNLEAK 419 (423)
Q Consensus 386 ~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 419 (423)
.+.+++++|.++..+|++++|++.|++|+++.+.
T Consensus 263 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 296 (383)
T 3ulq_A 263 LPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQK 296 (383)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999988544
|
| >4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=98.98 E-value=1.7e-09 Score=103.59 Aligned_cols=102 Identities=14% Similarity=0.098 Sum_probs=94.5
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcH----HHHhhHHHHHHhcCChHHHHHHHHHhHhc------CCC
Q 014484 316 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSP----TVYARRCLSYLMNDMPQEALGDAMQAQVV------SPD 385 (423)
Q Consensus 316 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~----~~~~~~~~~~~~~~~~~~A~~~~~~a~~l------~p~ 385 (423)
..+..+...|..++..|+|++|+..|+++++++|+ +. .++.++|.+|..+|++++|+..+++++++ +|.
T Consensus 46 ~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 124 (411)
T 4a1s_A 46 SMCLELALEGERLCNAGDCRAGVAFFQAAIQAGTE-DLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLG 124 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccc-ChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchH
Confidence 45567778999999999999999999999999998 65 68999999999999999999999999998 688
Q ss_pred chHHHHHHHHHHHhCCChHHHHHHHHHhhcccc
Q 014484 386 WPTALYLQAACLFSLGMENDARETLKDGTNLEA 418 (423)
Q Consensus 386 ~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 418 (423)
.+.+++.+|.+|..+|++++|+..|++++++.+
T Consensus 125 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 157 (411)
T 4a1s_A 125 EAKSSGNLGNTLKVMGRFDEAAICCERHLTLAR 157 (411)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999998743
|
| >2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8 | Back alignment and structure |
|---|
Probab=98.97 E-value=6.5e-10 Score=90.82 Aligned_cols=80 Identities=8% Similarity=0.017 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHhcC-------CCCCcHHHH----hhHHHHHHhcCChHHHHHHHHHhHhcCCC
Q 014484 317 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDG-------GTMVSPTVY----ARRCLSYLMNDMPQEALGDAMQAQVVSPD 385 (423)
Q Consensus 317 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~-------~p~~~~~~~----~~~~~~~~~~~~~~~A~~~~~~a~~l~p~ 385 (423)
.+..+.++|..+...|+|++|+..|++||++ +|+ +..+| +++|.++..+|++++|+.+|++|++++|+
T Consensus 56 ~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~~e~~pd-~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~ 134 (159)
T 2hr2_A 56 DAFCHAGLAEALAGLRSFDEALHSADKALHYFNRRGELNQD-EGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEE 134 (159)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCTTST-HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccccCCCc-hHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCC
Confidence 3457888999999999999999999999999 999 99999 99999999999999999999999999999
Q ss_pred chHHHHHHHHHH
Q 014484 386 WPTALYLQAACL 397 (423)
Q Consensus 386 ~~~a~~~~g~~~ 397 (423)
+....-.+..+.
T Consensus 135 d~~~~~~~~~~~ 146 (159)
T 2hr2_A 135 RKGETPGKERMM 146 (159)
T ss_dssp CCSCCTTHHHHH
T ss_pred cHHHHHHHHHHH
Confidence 876555544443
|
| >3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A* | Back alignment and structure |
|---|
Probab=98.97 E-value=4.3e-09 Score=97.73 Aligned_cols=100 Identities=7% Similarity=-0.054 Sum_probs=91.3
Q ss_pred HHHHHHHHHHhcC-CHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhc-C-ChHHHHHHHHHhHhcCCCchHHHHHHHHH
Q 014484 320 NSKKHGDTAFRAK-DFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMN-D-MPQEALGDAMQAQVVSPDWPTALYLQAAC 396 (423)
Q Consensus 320 ~~~~~g~~~~~~~-~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~-~-~~~~A~~~~~~a~~l~p~~~~a~~~~g~~ 396 (423)
.+..++......| ++++++.+++++|..+|+ +..+|+.|+.++..+ + +++++++.++++++++|.|..||+.++.+
T Consensus 90 aWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPK-ny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy~AW~~R~wv 168 (349)
T 3q7a_A 90 VWQYRFSLLTSLNKSLEDELRLMNEFAVQNLK-SYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPKNYHTWAYLHWL 168 (349)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCC-CHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 5667788888888 599999999999999999 999999999999988 7 89999999999999999999999999999
Q ss_pred HHhCCChH--------HHHHHHHHhhcccccc
Q 014484 397 LFSLGMEN--------DARETLKDGTNLEAKK 420 (423)
Q Consensus 397 ~~~~~~~~--------~A~~~~~~al~l~~~~ 420 (423)
+..+|.++ ++++.++++++.+|.+
T Consensus 169 l~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N 200 (349)
T 3q7a_A 169 YSHFSTLGRISEAQWGSELDWCNEMLRVDGRN 200 (349)
T ss_dssp HHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTC
T ss_pred HHHhccccccchhhHHHHHHHHHHHHHhCCCC
Confidence 99999988 9999999999998875
|
| >3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A* | Back alignment and structure |
|---|
Probab=98.96 E-value=2.1e-09 Score=98.32 Aligned_cols=94 Identities=10% Similarity=-0.052 Sum_probs=88.2
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCc--hHHHHHHHHHHH
Q 014484 321 SKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW--PTALYLQAACLF 398 (423)
Q Consensus 321 ~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~--~~a~~~~g~~~~ 398 (423)
....+..+...+++++|+..|+++++.+|+ +..+++++|.++...|++++|+..++++++.+|++ +.++.++|.++.
T Consensus 188 ~~~~~~~l~~~~~~~~a~~~l~~al~~~P~-~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~ 266 (287)
T 3qou_A 188 GLVAQIELLXQAADTPEIQQLQQQVAENPE-DAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILA 266 (287)
T ss_dssp HHHHHHHHHHHHTSCHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcccCccHHHHHHHHhcCCc-cHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHH
Confidence 445566677888999999999999999999 99999999999999999999999999999999999 999999999999
Q ss_pred hCCChHHHHHHHHHhhc
Q 014484 399 SLGMENDARETLKDGTN 415 (423)
Q Consensus 399 ~~~~~~~A~~~~~~al~ 415 (423)
.+|+.++|+..|++++.
T Consensus 267 ~~g~~~~a~~~~r~al~ 283 (287)
T 3qou_A 267 ALGTGDALASXYRRQLY 283 (287)
T ss_dssp HHCTTCHHHHHHHHHHH
T ss_pred HcCCCCcHHHHHHHHHH
Confidence 99999999999999985
|
| >3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.96 E-value=1.7e-09 Score=105.89 Aligned_cols=109 Identities=7% Similarity=-0.043 Sum_probs=92.1
Q ss_pred hhhhhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhcC-----CCCC--cHHHHhhHHHHHHhcCChHHHHHHHHHhHh
Q 014484 309 QMWTSQMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDG-----GTMV--SPTVYARRCLSYLMNDMPQEALGDAMQAQV 381 (423)
Q Consensus 309 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~-----~p~~--~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~ 381 (423)
+.+....+.+....+++..+..+|+|++|+..|++++++ .|++ -...++|+|.+|..+|+|++|+..++++++
T Consensus 300 e~v~~~l~~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~ 379 (490)
T 3n71_A 300 EVVKEMIQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVD 379 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 444455556667778888899999999999999999964 3331 457899999999999999999999999996
Q ss_pred c--------CCCchHHHHHHHHHHHhCCChHHHHHHHHHhhccc
Q 014484 382 V--------SPDWPTALYLQAACLFSLGMENDARETLKDGTNLE 417 (423)
Q Consensus 382 l--------~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~ 417 (423)
+ .|+-+..++++|.+|..+|+|++|+..|++|+++-
T Consensus 380 i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~ 423 (490)
T 3n71_A 380 GYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAIL 423 (490)
T ss_dssp HHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 6 35567799999999999999999999999999764
|
| >2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio} | Back alignment and structure |
|---|
Probab=98.96 E-value=8.4e-10 Score=101.96 Aligned_cols=103 Identities=10% Similarity=-0.076 Sum_probs=90.1
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCC-----CcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCc-----
Q 014484 317 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTM-----VSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW----- 386 (423)
Q Consensus 317 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~-----~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~----- 386 (423)
.+..+...|..+...|+|++|+..|++|+++.+. ....++.++|.+|.. |++++|+..|++|+++.|..
T Consensus 75 ~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~ 153 (307)
T 2ifu_A 75 AAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQ 153 (307)
T ss_dssp HHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhH
Confidence 3456778899999999999999999999988542 125789999999999 99999999999999998754
Q ss_pred -hHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 014484 387 -PTALYLQAACLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 387 -~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
+.++.++|.+|..+|+|++|+..|++++++.+..
T Consensus 154 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 188 (307)
T 2ifu_A 154 AAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEM 188 (307)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc
Confidence 6799999999999999999999999999987653
|
| >1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=98.96 E-value=8.3e-10 Score=90.01 Aligned_cols=72 Identities=15% Similarity=-0.014 Sum_probs=63.4
Q ss_pred HHHHHHHHHHHHHhcCCH----------HHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcC-----------ChHHHHHH
Q 014484 317 ETLNSKKHGDTAFRAKDF----------STAIDCYTQFIDGGTMVSPTVYARRCLSYLMND-----------MPQEALGD 375 (423)
Q Consensus 317 ~~~~~~~~g~~~~~~~~~----------~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~-----------~~~~A~~~ 375 (423)
.+..+...|..+...+++ ++|+..|++||+++|+ +..+|+++|.+|..+| ++++|+.+
T Consensus 35 ~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~-~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~ 113 (158)
T 1zu2_A 35 DADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPK-KDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQF 113 (158)
T ss_dssp CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcC-cHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHH
Confidence 444667788888887765 5999999999999999 9999999999999885 89999999
Q ss_pred HHHhHhcCCCchHH
Q 014484 376 AMQAQVVSPDWPTA 389 (423)
Q Consensus 376 ~~~a~~l~p~~~~a 389 (423)
|++|++++|++...
T Consensus 114 ~~kAl~l~P~~~~y 127 (158)
T 1zu2_A 114 FQQAVDEQPDNTHY 127 (158)
T ss_dssp HHHHHHHCTTCHHH
T ss_pred HHHHHHhCCCCHHH
Confidence 99999999998643
|
| >1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=98.96 E-value=1.6e-09 Score=85.32 Aligned_cols=67 Identities=16% Similarity=-0.053 Sum_probs=64.1
Q ss_pred HHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 014484 354 TVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
..++.+|.++.+.|++++|+..++++++++|+++.+|+.+|.++..+|++++|+..|++|++++|..
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~ 84 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKD 84 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 4578899999999999999999999999999999999999999999999999999999999999964
|
| >1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=98.96 E-value=5.6e-09 Score=94.27 Aligned_cols=95 Identities=13% Similarity=0.033 Sum_probs=77.9
Q ss_pred HHHHHHHHHHHh----cCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHh----cCChHHHHHHHHHhHhcCCCchHHH
Q 014484 319 LNSKKHGDTAFR----AKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLM----NDMPQEALGDAMQAQVVSPDWPTAL 390 (423)
Q Consensus 319 ~~~~~~g~~~~~----~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~a~~l~p~~~~a~ 390 (423)
..+...|..+.. .+++++|+..|+++++.+ +..+++++|.+|.. .+++++|+..+++|++.+ ++.++
T Consensus 39 ~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~---~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~ 113 (273)
T 1ouv_A 39 SGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN---YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK--YAEGC 113 (273)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHH
T ss_pred HHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC--CccHH
Confidence 456667888888 888888888888888774 67888888888888 888888888888888874 78888
Q ss_pred HHHHHHHHh----CCChHHHHHHHHHhhcccc
Q 014484 391 YLQAACLFS----LGMENDARETLKDGTNLEA 418 (423)
Q Consensus 391 ~~~g~~~~~----~~~~~~A~~~~~~al~l~~ 418 (423)
+++|.+|.. .+++++|++.|++|+++++
T Consensus 114 ~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~~ 145 (273)
T 1ouv_A 114 ASLGGIYHDGKVVTRDFKKAVEYFTKACDLND 145 (273)
T ss_dssp HHHHHHHHHCSSSCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCcccCHHHHHHHHHHHHhcCc
Confidence 888888888 8888888888888887654
|
| >3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans} | Back alignment and structure |
|---|
Probab=98.96 E-value=4.8e-09 Score=96.27 Aligned_cols=91 Identities=9% Similarity=-0.076 Sum_probs=85.0
Q ss_pred HhcCCH-HHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcC--ChHHHHHHHHHhHhcCCCchHHHHHHHHHH----HhC-
Q 014484 329 FRAKDF-STAIDCYTQFIDGGTMVSPTVYARRCLSYLMND--MPQEALGDAMQAQVVSPDWPTALYLQAACL----FSL- 400 (423)
Q Consensus 329 ~~~~~~-~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~--~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~----~~~- 400 (423)
.++|.+ ++|+..++++|.++|+ +..+|+.|+.++..++ ++++|+..+++++.++|++..+|+.++.++ ..+
T Consensus 43 ~~~~e~s~~aL~~t~~~L~~nP~-~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~y~aW~~R~~iL~~~~~~l~ 121 (306)
T 3dra_A 43 MKAEEYSERALHITELGINELAS-HYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQIWNYRQLIIGQIMELNN 121 (306)
T ss_dssp HHTTCCSHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHTT
T ss_pred HHcCCCCHHHHHHHHHHHHHCcH-HHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHHhcc
Confidence 344555 6999999999999999 9999999999999999 999999999999999999999999999999 777
Q ss_pred --CChHHHHHHHHHhhcccccc
Q 014484 401 --GMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 401 --~~~~~A~~~~~~al~l~~~~ 420 (423)
++++++++.++++++++|++
T Consensus 122 ~~~~~~~EL~~~~~~l~~~pkn 143 (306)
T 3dra_A 122 NDFDPYREFDILEAMLSSDPKN 143 (306)
T ss_dssp TCCCTHHHHHHHHHHHHHCTTC
T ss_pred ccCCHHHHHHHHHHHHHhCCCC
Confidence 89999999999999999975
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=1.7e-09 Score=108.42 Aligned_cols=101 Identities=9% Similarity=0.039 Sum_probs=94.4
Q ss_pred HHHHHHHHHHhcC--CHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcC-ChHHHHHHHHHhHhcCCCchHHHHHHHHH
Q 014484 320 NSKKHGDTAFRAK--DFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMND-MPQEALGDAMQAQVVSPDWPTALYLQAAC 396 (423)
Q Consensus 320 ~~~~~g~~~~~~~--~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~-~~~~A~~~~~~a~~l~p~~~~a~~~~g~~ 396 (423)
.+..++-...+.+ ++++|++.++++++++|. +..+|++|+.+...+| .+++|+++++++|+.+|++..||+.+|.+
T Consensus 109 aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~-N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW~~r~~l 187 (567)
T 1dce_A 109 TWHHRCWLLSRLPEPNWARELELCARFLEADER-NFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCL 187 (567)
T ss_dssp HHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccccHHHHHHHHHHHHhhccc-cccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHHHHHHHH
Confidence 5677888888888 779999999999999999 9999999999999999 89999999999999999999999999999
Q ss_pred HHhC--------------CChHHHHHHHHHhhccccccC
Q 014484 397 LFSL--------------GMENDARETLKDGTNLEAKKN 421 (423)
Q Consensus 397 ~~~~--------------~~~~~A~~~~~~al~l~~~~~ 421 (423)
+..+ +.+++|++.+++|++++|.++
T Consensus 188 l~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai~~~P~~~ 226 (567)
T 1dce_A 188 LPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQ 226 (567)
T ss_dssp HHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHHHCSSCS
T ss_pred HHhhcccccccccccccHHHHHHHHHHHHHHHhhCCCCc
Confidence 9986 568999999999999999864
|
| >3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=98.95 E-value=1.7e-09 Score=92.64 Aligned_cols=101 Identities=10% Similarity=-0.084 Sum_probs=63.4
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcC---CCC---CcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCC--c---
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDG---GTM---VSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPD--W--- 386 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~---~p~---~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~--~--- 386 (423)
+..+...|..+...|++++|+..|.+++++ .++ ....++.++|.++..+|++++|+..+++++++.+. +
T Consensus 66 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 145 (203)
T 3gw4_A 66 HRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVA 145 (203)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHH
Confidence 345556667777777777777777777665 221 13455667777777777777777777777655321 1
Q ss_pred -hHHHHHHHHHHHhCCChHHHHHHHHHhhcccc
Q 014484 387 -PTALYLQAACLFSLGMENDARETLKDGTNLEA 418 (423)
Q Consensus 387 -~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 418 (423)
+.++.++|.++..+|++++|++.|++|+++-.
T Consensus 146 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 178 (203)
T 3gw4_A 146 IACAFRGLGDLAQQEKNLLEAQQHWLRARDIFA 178 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHH
Confidence 22456677777777777777777777766543
|
| >3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.94 E-value=2.3e-09 Score=102.06 Aligned_cols=102 Identities=14% Similarity=0.111 Sum_probs=93.4
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCc----HHHHhhHHHHHHhcCChHHHHHHHHHhHhc------CCCch
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVS----PTVYARRCLSYLMNDMPQEALGDAMQAQVV------SPDWP 387 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~----~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l------~p~~~ 387 (423)
+..+...|..++..|+|++|+..|+++++.+|. + ..++.++|.++...|++++|+..+++|+.+ .|..+
T Consensus 9 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 87 (406)
T 3sf4_A 9 CLELALEGERLCKSGDCRAGVSFFEAAVQVGTE-DLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEA 87 (406)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcc-cHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHHHH
Confidence 446778999999999999999999999999998 6 468999999999999999999999999988 56678
Q ss_pred HHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 014484 388 TALYLQAACLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 388 ~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
.+++.+|.++..+|++++|+..|++++++.+..
T Consensus 88 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 120 (406)
T 3sf4_A 88 KASGNLGNTLKVLGNFDEAIVCCQRHLDISREL 120 (406)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc
Confidence 899999999999999999999999999887653
|
| >3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B* | Back alignment and structure |
|---|
Probab=98.94 E-value=2.9e-09 Score=85.13 Aligned_cols=74 Identities=12% Similarity=0.051 Sum_probs=68.6
Q ss_pred cCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 014484 346 DGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 346 ~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
..+|. ++..+.++|.++...|+|++|+..++++++++|+++.+|+++|.++..+|++++|+..|+++++++|..
T Consensus 3 ~~~~~-~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~ 76 (137)
T 3q49_B 3 HMKSP-SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQS 76 (137)
T ss_dssp ---CC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred CCccc-cHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchh
Confidence 45677 899999999999999999999999999999999999999999999999999999999999999999863
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=98.94 E-value=1.6e-09 Score=97.47 Aligned_cols=121 Identities=15% Similarity=0.062 Sum_probs=86.9
Q ss_pred CCccceeeee-cceeeeeecCCChhhHHHHHHHHHHHhcCCCCC--ccceEeEEEeCCceeEEEecCCCCCHHhhhccCC
Q 014484 4 RCSKFSICWF-HCHLKSSVLESSDLGETLNLEEAKAVGNLRSER--LANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80 (423)
Q Consensus 4 ~g~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~ 80 (423)
.+.||+.... +..+.+|+.... ....+.+|+.++..+.+.+ ++++++++..++..++||||++|.+|. ...
T Consensus 33 ~~~v~~~~~~~g~~~vlK~~~~~--~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~--~~~-- 106 (264)
T 1nd4_A 33 DAAVFRLSAQGRPVLFVKTDLSG--ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL--SSH-- 106 (264)
T ss_dssp SCEEEEEECTTSCCEEEEEECSC--TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--TSC--
T ss_pred CceEEEEecCCCCeEEEEeCCcc--cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--cCc--
Confidence 3677776543 345666665443 2346788999999985434 677899988888889999999998884 211
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHcCC-----------------------------------------------------
Q 014484 81 TQPMKWAMRLRVALYLAQALEYCSSKG----------------------------------------------------- 107 (423)
Q Consensus 81 ~~~~~~~~~~~i~~qi~~~l~~lH~~~----------------------------------------------------- 107 (423)
.+. ..++.+++..|..||+..
T Consensus 107 ---~~~---~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 180 (264)
T 1nd4_A 107 ---LAP---AEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMPD 180 (264)
T ss_dssp ---CCH---HHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHHTCCS
T ss_pred ---CCH---hHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHHHhcCC
Confidence 122 256677777777777632
Q ss_pred ----CeeeccCCCCCeeecCCCCeEEccccccc
Q 014484 108 ----RALYHDLNAYRILFDKDGNPRLSSFGLMK 136 (423)
Q Consensus 108 ----~iiH~dlkp~Nill~~~~~~kl~Dfg~~~ 136 (423)
.++|+|++|.||++++++.+.|+||+.+.
T Consensus 181 ~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 181 GEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp SCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred CCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 18999999999999876666799999753
|
| >2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=98.93 E-value=4.6e-09 Score=96.95 Aligned_cols=96 Identities=14% Similarity=0.013 Sum_probs=88.5
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHH-hcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHH
Q 014484 320 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYL-MNDMPQEALGDAMQAQVVSPDWPTALYLQAACLF 398 (423)
Q Consensus 320 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~ 398 (423)
.+...|..+.+.|++++|+..|++|++.+|. ...+|...+.... ..|++++|+..|++|++++|+++.+|..+|..+.
T Consensus 136 ~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~-~~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~ 214 (308)
T 2ond_A 136 VYIQYMKFARRAEGIKSGRMIFKKAREDART-RHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLS 214 (308)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHTSTTC-CTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 5778899999999999999999999999998 8888887766644 3799999999999999999999999999999999
Q ss_pred hCCChHHHHHHHHHhhcc
Q 014484 399 SLGMENDARETLKDGTNL 416 (423)
Q Consensus 399 ~~~~~~~A~~~~~~al~l 416 (423)
.+|++++|+..|++|++.
T Consensus 215 ~~g~~~~A~~~~~~al~~ 232 (308)
T 2ond_A 215 HLNEDNNTRVLFERVLTS 232 (308)
T ss_dssp TTCCHHHHHHHHHHHHHS
T ss_pred HCCCHHHHHHHHHHHHhc
Confidence 999999999999999985
|
| >3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A | Back alignment and structure |
|---|
Probab=98.93 E-value=2.9e-09 Score=80.69 Aligned_cols=84 Identities=11% Similarity=0.054 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCch--HHHHHHHH
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWP--TALYLQAA 395 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~--~a~~~~g~ 395 (423)
...+...|..++..|+|++|+..|+++++++|+ +..+|+++|.+|..+|++++|+..+++++++.|++. .+...+..
T Consensus 7 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~l~~ 85 (100)
T 3ma5_A 7 PFTRYALAQEHLKHDNASRALALFEELVETDPD-YVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQKDLSELQD 85 (100)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchhHHHHHHH
Confidence 345678899999999999999999999999999 999999999999999999999999999999987544 34444555
Q ss_pred HHHhCCC
Q 014484 396 CLFSLGM 402 (423)
Q Consensus 396 ~~~~~~~ 402 (423)
.+...+.
T Consensus 86 ~l~~~~~ 92 (100)
T 3ma5_A 86 AKLKAEG 92 (100)
T ss_dssp HHHHHHT
T ss_pred HHHHccc
Confidence 5544433
|
| >3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.93 E-value=2.9e-09 Score=101.25 Aligned_cols=104 Identities=13% Similarity=0.039 Sum_probs=92.8
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCC-----CCcHHHHhhHHHHHHhcCChHHHHHHHHHhHh-----cCCC
Q 014484 316 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGT-----MVSPTVYARRCLSYLMNDMPQEALGDAMQAQV-----VSPD 385 (423)
Q Consensus 316 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p-----~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~-----l~p~ 385 (423)
..+..+...|..+...|+|++|++.|.+|+++.+ .....++.++|.+|..+|++++|+..+++|++ .+|.
T Consensus 180 ~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~ 259 (378)
T 3q15_A 180 RTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDL 259 (378)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGG
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChh
Confidence 3455677899999999999999999999998633 11357899999999999999999999999999 8899
Q ss_pred chHHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 014484 386 WPTALYLQAACLFSLGMENDARETLKDGTNLEAK 419 (423)
Q Consensus 386 ~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 419 (423)
.+.+++++|.++..+|++++|+..|++|+++.+.
T Consensus 260 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 293 (378)
T 3q15_A 260 LPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITA 293 (378)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999987554
|
| >3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.93 E-value=2e-09 Score=102.52 Aligned_cols=98 Identities=14% Similarity=0.009 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCC------cHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCch-----
Q 014484 319 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMV------SPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWP----- 387 (423)
Q Consensus 319 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~------~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~----- 387 (423)
..+...|..++..|++++|+..|.+|+++.+.. ...++.++|.+|..+|++++|+..+++|+++.+...
T Consensus 144 ~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 223 (383)
T 3ulq_A 144 EFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLM 223 (383)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHH
Confidence 344444555555555555555555555442220 123455555555555555555555555554433221
Q ss_pred -HHHHHHHHHHHhCCChHHHHHHHHHhhcc
Q 014484 388 -TALYLQAACLFSLGMENDARETLKDGTNL 416 (423)
Q Consensus 388 -~a~~~~g~~~~~~~~~~~A~~~~~~al~l 416 (423)
.+++++|.+|..+|++++|++.|++|+++
T Consensus 224 ~~~~~~lg~~y~~~g~~~~A~~~~~~al~~ 253 (383)
T 3ulq_A 224 GRTLYNIGLCKNSQSQYEDAIPYFKRAIAV 253 (383)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 35555555555555555555555555544
|
| >3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.93 E-value=2.3e-09 Score=87.66 Aligned_cols=105 Identities=10% Similarity=0.020 Sum_probs=91.0
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCC-----cHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCc---
Q 014484 315 MQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMV-----SPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW--- 386 (423)
Q Consensus 315 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-----~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~--- 386 (423)
...+..+...|..++..|++++|+..|.+++++.+.. ...++.++|.++..+|++++|+..+++++++.+..
T Consensus 6 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~ 85 (164)
T 3ro3_A 6 AAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDR 85 (164)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCc
Confidence 3456677889999999999999999999999875431 23689999999999999999999999999886553
Q ss_pred ---hHHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 014484 387 ---PTALYLQAACLFSLGMENDARETLKDGTNLEAK 419 (423)
Q Consensus 387 ---~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 419 (423)
+.+++++|.++..+|++++|++.|++++++.+.
T Consensus 86 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~ 121 (164)
T 3ro3_A 86 AVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQE 121 (164)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 678999999999999999999999999987543
|
| >3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.93 E-value=5.1e-09 Score=78.03 Aligned_cols=71 Identities=18% Similarity=-0.020 Sum_probs=66.3
Q ss_pred CCCCcHHHHhhHHHHHHhcCC---hHHHHHHHHHhHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 014484 348 GTMVSPTVYARRCLSYLMNDM---PQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAK 419 (423)
Q Consensus 348 ~p~~~~~~~~~~~~~~~~~~~---~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 419 (423)
+|+ ++.++..+|.+++..++ .++|...+++|++++|+++.+++.+|.+++..|+|++|+..|+++++.+|.
T Consensus 2 ~p~-~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~ 75 (93)
T 3bee_A 2 NAV-TATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDP 75 (93)
T ss_dssp CCC-CHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCT
T ss_pred CCC-CHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Confidence 577 89999999999986665 799999999999999999999999999999999999999999999999987
|
| >2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.92 E-value=1.9e-09 Score=81.13 Aligned_cols=65 Identities=15% Similarity=0.100 Sum_probs=62.1
Q ss_pred HhhHHHHHHhcCChHHHHHHHHHhHhcCCCchH-HHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 014484 356 YARRCLSYLMNDMPQEALGDAMQAQVVSPDWPT-ALYLQAACLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 356 ~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~-a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
.+++|.++...|++++|+..++++++++|+++. +|+++|.++..+|++++|++.|+++++++|..
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~ 68 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDS 68 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTS
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCc
Confidence 367899999999999999999999999999999 99999999999999999999999999999875
|
| >4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=98.90 E-value=4.9e-09 Score=94.31 Aligned_cols=100 Identities=12% Similarity=-0.087 Sum_probs=88.4
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhcCCCC-CcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcC--CC-chHHHHHHHH
Q 014484 320 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTM-VSPTVYARRCLSYLMNDMPQEALGDAMQAQVVS--PD-WPTALYLQAA 395 (423)
Q Consensus 320 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~-~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~--p~-~~~a~~~~g~ 395 (423)
..+..|..+++.|+|++|+..|++++...+. ....+++++|.++..+|++++|+..|++++.-. |. .+++++++|.
T Consensus 137 ~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~gl 216 (282)
T 4f3v_A 137 VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAWYLAM 216 (282)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHH
Confidence 5567899999999999999999988876422 014689999999999999999999999998654 66 7789999999
Q ss_pred HHHhCCChHHHHHHHHHhhccccc
Q 014484 396 CLFSLGMENDARETLKDGTNLEAK 419 (423)
Q Consensus 396 ~~~~~~~~~~A~~~~~~al~l~~~ 419 (423)
++..+|+.++|...|++++..+|.
T Consensus 217 aL~~lGr~deA~~~l~~a~a~~P~ 240 (282)
T 4f3v_A 217 ARRSQGNESAAVALLEWLQTTHPE 240 (282)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHSCC
T ss_pred HHHHcCCHHHHHHHHHHHHhcCCc
Confidence 999999999999999999999986
|
| >4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.89 E-value=3.6e-09 Score=103.31 Aligned_cols=100 Identities=9% Similarity=-0.023 Sum_probs=87.6
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhc-------------------CChHHHHHHHHHh
Q 014484 319 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMN-------------------DMPQEALGDAMQA 379 (423)
Q Consensus 319 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~-------------------~~~~~A~~~~~~a 379 (423)
..+...|..+...|++++|+..|.+|++.+|+ +..++.++|.+|... +.+++|+..++++
T Consensus 248 ~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a 326 (472)
T 4g1t_A 248 DVLRSAAKFYRRKDEPDKAIELLKKALEYIPN-NAYLHCQIGCCYRAKVFQVMNLRENGMYGKRKLLELIGHAVAHLKKA 326 (472)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCchHHHHHHHHHHHHhCCC-hHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 35667899999999999999999999999999 999999999988643 3467888999999
Q ss_pred HhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 014484 380 QVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAK 419 (423)
Q Consensus 380 ~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 419 (423)
++++|+++.+++.+|.++..+|++++|++.|++|+++++.
T Consensus 327 ~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~kaL~~~~~ 366 (472)
T 4g1t_A 327 DEANDNLFRVCSILASLHALADQYEEAEYYFQKEFSKELT 366 (472)
T ss_dssp HHHCTTTCCCHHHHHHHHHHTTCHHHHHHHHHHHHHSCCC
T ss_pred hhcCCchhhhhhhHHHHHHHhccHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999999999999887764
|
| >3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* | Back alignment and structure |
|---|
Probab=98.89 E-value=4.5e-09 Score=101.31 Aligned_cols=100 Identities=11% Similarity=-0.069 Sum_probs=83.6
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhcC-----CCCC--cHHHHhhHHHHHHhcCChHHHHHHHHHhHhc--------C
Q 014484 319 LNSKKHGDTAFRAKDFSTAIDCYTQFIDG-----GTMV--SPTVYARRCLSYLMNDMPQEALGDAMQAQVV--------S 383 (423)
Q Consensus 319 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~-----~p~~--~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l--------~ 383 (423)
......+......|+|++|+..|++++++ .|++ -...++|+|.+|..+|+|++|+..+++++++ .
T Consensus 299 ~~~le~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~H 378 (433)
T 3qww_A 299 RNVIEEFRRAKHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYS 378 (433)
T ss_dssp HHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSC
T ss_pred HHHHHHHHHhhhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCC
Confidence 34445555556679999999999999974 4441 3478999999999999999999999999966 4
Q ss_pred CCchHHHHHHHHHHHhCCChHHHHHHHHHhhcccc
Q 014484 384 PDWPTALYLQAACLFSLGMENDARETLKDGTNLEA 418 (423)
Q Consensus 384 p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 418 (423)
|+-+..++++|.+|..+|+|++|+..|++|+++-.
T Consensus 379 p~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~ 413 (433)
T 3qww_A 379 LNVASMWLKLGRLYMGLENKAAGEKALKKAIAIME 413 (433)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHH
Confidence 56677999999999999999999999999997643
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=98.88 E-value=8.2e-10 Score=101.94 Aligned_cols=166 Identities=13% Similarity=0.079 Sum_probs=107.9
Q ss_pred ceeeeeecCCChhhHHHHHHHHHHHhcCC-CCC--ccceEeEEEeCC---ceeEEEecCCCCCHHhhhccCCCCCCCHHH
Q 014484 15 CHLKSSVLESSDLGETLNLEEAKAVGNLR-SER--LANLIGCCYEAD---ERLLVAEFMPNETLAKHLFHWETQPMKWAM 88 (423)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~n--iv~~~~~~~~~~---~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~ 88 (423)
..+.+++. ........+.+|++++..+. +.. +++++..+..++ ..|+||++++|.+|..... ..++.++
T Consensus 41 ~~~vlR~~-~~~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G~~l~~~~~----~~l~~~~ 115 (304)
T 3sg8_A 41 RDFIFKFP-KHSRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKGVPLTPLLL----NNLPKQS 115 (304)
T ss_dssp TSEEEEEE-SSHHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCCEECCHHHH----HTSCHHH
T ss_pred CEEEEEec-CCcchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCCeECCcccc----ccCCHHH
Confidence 44444443 23334567889999998883 333 556666554433 2489999999988875432 2467778
Q ss_pred HHHHHHHHHHHHHHHHc----------------------------------------------------------CCCee
Q 014484 89 RLRVALYLAQALEYCSS----------------------------------------------------------KGRAL 110 (423)
Q Consensus 89 ~~~i~~qi~~~l~~lH~----------------------------------------------------------~~~ii 110 (423)
...++.+++..+..||+ .. ++
T Consensus 116 ~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~-~~ 194 (304)
T 3sg8_A 116 QNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDFYRDILENEIYFKYYPC-LI 194 (304)
T ss_dssp HHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTCGGGTCCCCE-EE
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHHHHHHHHhccccccCCce-eE
Confidence 88888888888888885 12 79
Q ss_pred eccCCCCCeeecC--CCCeEEccccccccCCCCCccccCccc---CCcccccc--CCC------------CCCcceehhH
Q 014484 111 YHDLNAYRILFDK--DGNPRLSSFGLMKNSRDGKSYSTNLAF---TPPEYMRT--GRV------------TPESVVYSFG 171 (423)
Q Consensus 111 H~dlkp~Nill~~--~~~~kl~Dfg~~~~~~~~~~~~~t~~y---~aPE~~~~--~~~------------~~~~Di~slG 171 (423)
|+|++|.||+++. .+.+.|+||+.+............... ..|+.... ..| ....+.|++|
T Consensus 195 HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~~~~~~~~~r~~~~~~~~~l~ 274 (304)
T 3sg8_A 195 HNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHKDIPTVLEKYRMKEKYWSFE 274 (304)
T ss_dssp CSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHH
T ss_pred eCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHH
Confidence 9999999999988 456789999987654432221111111 22322110 001 1125789999
Q ss_pred HHHHHHhhCCCCCCc
Q 014484 172 TMLLDLLSGKHIPPS 186 (423)
Q Consensus 172 ~~l~el~~g~~~~~~ 186 (423)
.+++.+.+|..++..
T Consensus 275 ~~~~~~~~g~~~~~~ 289 (304)
T 3sg8_A 275 KIIYGKEYGYMDWYE 289 (304)
T ss_dssp HHHHHHHTTCHHHHH
T ss_pred HHHHHHHcCCHHHHH
Confidence 999999999865443
|
| >1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A | Back alignment and structure |
|---|
Probab=98.88 E-value=1.3e-08 Score=79.30 Aligned_cols=82 Identities=15% Similarity=0.142 Sum_probs=76.8
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHH
Q 014484 319 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLF 398 (423)
Q Consensus 319 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~ 398 (423)
..+...|..++..|++++|+..|+++++.+|. +..++.++|.++...|++++|+..++++++++|+++.++..+|.++.
T Consensus 44 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 122 (125)
T 1na0_A 44 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPN-NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQ 122 (125)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 34567899999999999999999999999999 99999999999999999999999999999999999999999999987
Q ss_pred hCC
Q 014484 399 SLG 401 (423)
Q Consensus 399 ~~~ 401 (423)
.+|
T Consensus 123 ~~g 125 (125)
T 1na0_A 123 KQG 125 (125)
T ss_dssp HHC
T ss_pred hcc
Confidence 654
|
| >2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2 | Back alignment and structure |
|---|
Probab=98.88 E-value=2e-09 Score=98.14 Aligned_cols=100 Identities=7% Similarity=-0.056 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchH-----HH--
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPT-----AL-- 390 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~-----a~-- 390 (423)
...+...|..++..|+|++|+..|+++++++|+ +..+++++|.+|..+|++++|+..++++++++|+++. .+
T Consensus 38 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~~~~~ 116 (281)
T 2c2l_A 38 AVYYTNRALCYLKMQQPEQALADCRRALELDGQ-SVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSA 116 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCCSHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchhhHHHHHHHH
Confidence 446778999999999999999999999999999 9999999999999999999999999999999987531 11
Q ss_pred ------------------------HHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 014484 391 ------------------------YLQAACLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 391 ------------------------~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
..+|. +..|++++|++.|++|++++|.+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~--l~~~~~~~A~~~~~~al~~~p~~ 168 (281)
T 2c2l_A 117 LRIAKKKRWNSIEERRIHQESELHSYLTR--LIAAERERELEECQRNHEGHEDD 168 (281)
T ss_dssp HHHHHHHHHHHHHHTCCCCCCHHHHHHHH--HHHHHHHHHHTTTSGGGTTTSCH
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHH--HHHHHHHHHHHHHHhhhccccch
Confidence 11122 23689999999999999998863
|
| >1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=98.87 E-value=7.2e-09 Score=83.50 Aligned_cols=88 Identities=9% Similarity=0.013 Sum_probs=79.6
Q ss_pred CHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcC---ChHHHHHHHHHhHhcC-C-CchHHHHHHHHHHHhCCChHHHH
Q 014484 333 DFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMND---MPQEALGDAMQAQVVS-P-DWPTALYLQAACLFSLGMENDAR 407 (423)
Q Consensus 333 ~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~---~~~~A~~~~~~a~~l~-p-~~~~a~~~~g~~~~~~~~~~~A~ 407 (423)
..+.+.+.|.+.++.++. +..+.++.|.|+.+.+ +.++++..++..++.+ | ++.+++|++|.+++++|+|++|+
T Consensus 13 ~l~~~~~~y~~e~~~~~~-~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~ 91 (152)
T 1pc2_A 13 DLLKFEKKFQSEKAAGSV-SKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKAL 91 (152)
T ss_dssp HHHHHHHHHHHHHHTTCC-CHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHH
T ss_pred HHHHHHHHHHHHHccCCC-cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHH
Confidence 346678888989888888 9999999999999988 6779999999999999 7 67999999999999999999999
Q ss_pred HHHHHhhccccccC
Q 014484 408 ETLKDGTNLEAKKN 421 (423)
Q Consensus 408 ~~~~~al~l~~~~~ 421 (423)
+.++++|+++|.+.
T Consensus 92 ~y~~~lL~ieP~n~ 105 (152)
T 1pc2_A 92 KYVRGLLQTEPQNN 105 (152)
T ss_dssp HHHHHHHHHCTTCH
T ss_pred HHHHHHHhcCCCCH
Confidence 99999999999763
|
| >3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.87 E-value=7.2e-09 Score=94.72 Aligned_cols=100 Identities=13% Similarity=0.026 Sum_probs=91.5
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHhcC--------CCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhc------
Q 014484 317 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDG--------GTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVV------ 382 (423)
Q Consensus 317 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~--------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l------ 382 (423)
.+..+...|..++..|++++|+..|++++++ .|. ...++.++|.+|...|++++|+..+++++++
T Consensus 26 ~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 104 (311)
T 3nf1_A 26 RLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPD-VATMLNILALVYRDQNKYKDAANLLNDALAIREKTLG 104 (311)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHH-HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhC
Confidence 4456778899999999999999999999985 566 7899999999999999999999999999988
Q ss_pred --CCCchHHHHHHHHHHHhCCChHHHHHHHHHhhccc
Q 014484 383 --SPDWPTALYLQAACLFSLGMENDARETLKDGTNLE 417 (423)
Q Consensus 383 --~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~ 417 (423)
+|....+++.+|.++..+|++++|++.|++++++.
T Consensus 105 ~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~ 141 (311)
T 3nf1_A 105 KDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIR 141 (311)
T ss_dssp TTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 57788999999999999999999999999999874
|
| >1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=98.86 E-value=1.7e-08 Score=77.66 Aligned_cols=80 Identities=10% Similarity=-0.049 Sum_probs=74.8
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHH
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 397 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 397 (423)
...+...|..++..|++++|+..|+++++.+|. +..++.++|.++..+|++++|+..++++++++|+++.++..++.+.
T Consensus 38 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 116 (118)
T 1elw_A 38 HVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPD-WGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNME 116 (118)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhh
Confidence 345677899999999999999999999999999 9999999999999999999999999999999999999999999875
Q ss_pred H
Q 014484 398 F 398 (423)
Q Consensus 398 ~ 398 (423)
.
T Consensus 117 ~ 117 (118)
T 1elw_A 117 A 117 (118)
T ss_dssp H
T ss_pred c
Confidence 3
|
| >3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A* | Back alignment and structure |
|---|
Probab=98.85 E-value=9.2e-09 Score=95.06 Aligned_cols=101 Identities=9% Similarity=0.047 Sum_probs=92.7
Q ss_pred HHHHHHHHHHhcC--CHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCC-hHHHHHHHHHhHhcCCCchHHHHHHHHH
Q 014484 320 NSKKHGDTAFRAK--DFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDM-PQEALGDAMQAQVVSPDWPTALYLQAAC 396 (423)
Q Consensus 320 ~~~~~g~~~~~~~--~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~-~~~A~~~~~~a~~l~p~~~~a~~~~g~~ 396 (423)
.+..++......+ ++++++.+++++++.+|. |..+|++|+.+....|. +++++++++++|+.+|+|..||+.++.+
T Consensus 110 aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dpr-Ny~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~~R~~l 188 (331)
T 3dss_A 110 TWHHRCWLLSRLPEPNWARELELCARFLEADER-NFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCL 188 (331)
T ss_dssp HHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHHHHHHH
T ss_pred HHHHHHHHHhccCcccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 5566777777777 599999999999999999 99999999999999999 6999999999999999999999999999
Q ss_pred HHhC--------------CChHHHHHHHHHhhccccccC
Q 014484 397 LFSL--------------GMENDARETLKDGTNLEAKKN 421 (423)
Q Consensus 397 ~~~~--------------~~~~~A~~~~~~al~l~~~~~ 421 (423)
+..+ +.++++++.+.+|+.++|.++
T Consensus 189 l~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P~d~ 227 (331)
T 3dss_A 189 LPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQ 227 (331)
T ss_dssp HHHHSCCC------CCCHHHHHHHHHHHHHHHHHSTTCH
T ss_pred HHHhhhccccccccccchHHHHHHHHHHHHHHHhCCCCH
Confidence 9988 568999999999999999864
|
| >3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A* | Back alignment and structure |
|---|
Probab=98.83 E-value=2e-08 Score=93.21 Aligned_cols=90 Identities=10% Similarity=-0.044 Sum_probs=84.9
Q ss_pred hcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcC-ChHHHHHHHHHhHhcCCCchHHHHHHHHHHHhC-C-ChHHH
Q 014484 330 RAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMND-MPQEALGDAMQAQVVSPDWPTALYLQAACLFSL-G-MENDA 406 (423)
Q Consensus 330 ~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~-~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~-~-~~~~A 406 (423)
+.+..++|++.++++|.++|+ +..+|+.|+.++..++ .+++++..+++++..+|++..+|+.++.++..+ + +++++
T Consensus 66 ~~e~se~AL~lt~~~L~~nP~-~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~~~E 144 (349)
T 3q7a_A 66 KEEKSERALELTEIIVRMNPA-HYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDPVSE 144 (349)
T ss_dssp TTCCSHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCCHHH
T ss_pred hCCCCHHHHHHHHHHHHhCch-hHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCChHHH
Confidence 345567999999999999999 9999999999999999 599999999999999999999999999999998 8 99999
Q ss_pred HHHHHHhhcccccc
Q 014484 407 RETLKDGTNLEAKK 420 (423)
Q Consensus 407 ~~~~~~al~l~~~~ 420 (423)
++.++++++++|++
T Consensus 145 L~~~~k~L~~dpkN 158 (349)
T 3q7a_A 145 IEYIHGSLLPDPKN 158 (349)
T ss_dssp HHHHHHHTSSCTTC
T ss_pred HHHHHHHHHhCCCC
Confidence 99999999999975
|
| >2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.83 E-value=4.2e-08 Score=79.10 Aligned_cols=82 Identities=10% Similarity=-0.005 Sum_probs=76.1
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHH
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 397 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 397 (423)
...+...|..++..|+|++|+..|+++++.+|. +..+++++|.++..+|++++|+..++++++++|++..++..++.+.
T Consensus 65 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 143 (148)
T 2dba_A 65 AVLHRNRAACHLKLEDYDKAETEASKAIEKDGG-DVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNIS 143 (148)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSC-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHhhCcc-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 456778899999999999999999999999999 9999999999999999999999999999999999999999888876
Q ss_pred HhC
Q 014484 398 FSL 400 (423)
Q Consensus 398 ~~~ 400 (423)
...
T Consensus 144 ~~~ 146 (148)
T 2dba_A 144 GPS 146 (148)
T ss_dssp CSC
T ss_pred hhc
Confidence 443
|
| >3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A* | Back alignment and structure |
|---|
Probab=98.83 E-value=2.3e-08 Score=92.39 Aligned_cols=100 Identities=4% Similarity=-0.123 Sum_probs=83.9
Q ss_pred HHHHHHHHHHhcCC----------HHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCC--hHHHHHHHHHhHhcCCCch
Q 014484 320 NSKKHGDTAFRAKD----------FSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDM--PQEALGDAMQAQVVSPDWP 387 (423)
Q Consensus 320 ~~~~~g~~~~~~~~----------~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~--~~~A~~~~~~a~~l~p~~~ 387 (423)
.+..++......+. +++++.++++++..+|. ++.+|+.|+.++..+++ +++++..++++++++|.|.
T Consensus 66 aWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PK-ny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprNy 144 (331)
T 3dss_A 66 LWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPK-SYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNF 144 (331)
T ss_dssp HHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCCH
Confidence 44556666655444 78899999999999998 89999999999988884 8899999999999999999
Q ss_pred HHHHHHHHHHHhCCC-hHHHHHHHHHhhcccccc
Q 014484 388 TALYLQAACLFSLGM-ENDARETLKDGTNLEAKK 420 (423)
Q Consensus 388 ~a~~~~g~~~~~~~~-~~~A~~~~~~al~l~~~~ 420 (423)
.||..++.++..+|. ++++++.+.++++.+|.+
T Consensus 145 ~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N 178 (331)
T 3dss_A 145 HCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSN 178 (331)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCC
T ss_pred HHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCC
Confidence 999999999999988 589999999999888875
|
| >1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=98.82 E-value=2.3e-08 Score=90.20 Aligned_cols=97 Identities=21% Similarity=0.127 Sum_probs=85.8
Q ss_pred HHHHHHHHHHHh----cCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHh----cCChHHHHHHHHHhHhcCCCchHHH
Q 014484 319 LNSKKHGDTAFR----AKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLM----NDMPQEALGDAMQAQVVSPDWPTAL 390 (423)
Q Consensus 319 ~~~~~~g~~~~~----~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~a~~l~p~~~~a~ 390 (423)
..+...|..+.. .+++++|+..|+++++. . +..+++++|.+|.. .+++++|+..++++++.+| +.++
T Consensus 147 ~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~--~-~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~--~~a~ 221 (273)
T 1ouv_A 147 DGCTILGSLYDAGRGTPKDLKKALASYDKACDL--K-DSPGCFNAGNMYHHGEGATKNFKEALARYSKACELEN--GGGC 221 (273)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHTTC--HHHH
T ss_pred HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--C-CHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHhCCC--HHHH
Confidence 345567888887 89999999999999987 3 67889999999999 9999999999999999876 8899
Q ss_pred HHHHHHHHh----CCChHHHHHHHHHhhcccccc
Q 014484 391 YLQAACLFS----LGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 391 ~~~g~~~~~----~~~~~~A~~~~~~al~l~~~~ 420 (423)
+++|.+|.. .+++++|++.|++|++++|..
T Consensus 222 ~~l~~~~~~g~~~~~~~~~A~~~~~~a~~~~~~~ 255 (273)
T 1ouv_A 222 FNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKG 255 (273)
T ss_dssp HHHHHHHHTTSSSSCCSTTHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHcCCCcccCHHHHHHHHHHHHHcCCHH
Confidence 999999999 999999999999999988763
|
| >3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.79 E-value=1.4e-08 Score=96.50 Aligned_cols=97 Identities=13% Similarity=-0.048 Sum_probs=43.5
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCC------cHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCC------Cch
Q 014484 320 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMV------SPTVYARRCLSYLMNDMPQEALGDAMQAQVVSP------DWP 387 (423)
Q Consensus 320 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~------~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p------~~~ 387 (423)
.+...|..++..|++++|+..|.+|+++.+.. ...++.++|.+|..+|++++|+..+++|+++.+ ..+
T Consensus 143 ~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~ 222 (378)
T 3q15_A 143 FHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIA 222 (378)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 33444444444445555555554444432210 123444445555555555555555554444321 122
Q ss_pred HHHHHHHHHHHhCCChHHHHHHHHHhhcc
Q 014484 388 TALYLQAACLFSLGMENDARETLKDGTNL 416 (423)
Q Consensus 388 ~a~~~~g~~~~~~~~~~~A~~~~~~al~l 416 (423)
.+++++|.+|..+|++++|++.|++|+++
T Consensus 223 ~~~~~lg~~y~~~~~~~~A~~~~~~al~~ 251 (378)
T 3q15_A 223 ISLLNIANSYDRSGDDQMAVEHFQKAAKV 251 (378)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 34444455555555555555555544443
|
| >3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.78 E-value=9e-09 Score=97.92 Aligned_cols=100 Identities=11% Similarity=0.011 Sum_probs=66.1
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcH------HHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCc------
Q 014484 319 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSP------TVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW------ 386 (423)
Q Consensus 319 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~------~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~------ 386 (423)
..+...|..++..|++++|+..|++++++.+. .. .++.++|.+|..+|++++|+..+++++++.|+.
T Consensus 188 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 266 (406)
T 3sf4_A 188 RAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKE-FGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVE 266 (406)
T ss_dssp HHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHHHh-cCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcCchHH
Confidence 34556667777777777777777777765443 22 366677777777777777777777777665554
Q ss_pred hHHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 014484 387 PTALYLQAACLFSLGMENDARETLKDGTNLEAK 419 (423)
Q Consensus 387 ~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 419 (423)
+.+++.+|.++..+|++++|+..|++++++.+.
T Consensus 267 ~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 299 (406)
T 3sf4_A 267 AQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQE 299 (406)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHh
Confidence 566677777777777777777777777665443
|
| >3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=98.78 E-value=1.4e-08 Score=86.92 Aligned_cols=102 Identities=12% Similarity=0.031 Sum_probs=92.5
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHhc------CCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhc---CC---
Q 014484 317 ETLNSKKHGDTAFRAKDFSTAIDCYTQFID------GGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVV---SP--- 384 (423)
Q Consensus 317 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~------~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l---~p--- 384 (423)
.+..+...|..++..|++++|+..|.++++ ..+. ...++.++|.++..+|++++|+..+++++++ .+
T Consensus 25 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 103 (203)
T 3gw4_A 25 ASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTA-EHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDP 103 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCH
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccH
Confidence 455667789999999999999999999999 8999 9999999999999999999999999999998 33
Q ss_pred -CchHHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 014484 385 -DWPTALYLQAACLFSLGMENDARETLKDGTNLEAK 419 (423)
Q Consensus 385 -~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 419 (423)
..+.+++++|.++..+|++++|+..|++++++.+.
T Consensus 104 ~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~ 139 (203)
T 3gw4_A 104 LAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQ 139 (203)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 44678999999999999999999999999976543
|
| >3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.78 E-value=2.9e-08 Score=86.31 Aligned_cols=93 Identities=15% Similarity=-0.008 Sum_probs=61.8
Q ss_pred HHHHHHHHHHhcC----CHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHh----cCChHHHHHHHHHhHhcCC--CchHH
Q 014484 320 NSKKHGDTAFRAK----DFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLM----NDMPQEALGDAMQAQVVSP--DWPTA 389 (423)
Q Consensus 320 ~~~~~g~~~~~~~----~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~a~~l~p--~~~~a 389 (423)
.+...|..+.. + ++++|+..|++|++ +. ++.+++++|.+|.. .+++++|+..+++|++..| +++.+
T Consensus 52 a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~--~g-~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a 127 (212)
T 3rjv_A 52 ALALLAQLKIR-NPQQADYPQARQLAEKAVE--AG-SKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDA 127 (212)
T ss_dssp HHHHHHHHTTS-STTSCCHHHHHHHHHHHHH--TT-CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHH
T ss_pred HHHHHHHHHHc-CCCCCCHHHHHHHHHHHHH--CC-CHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHH
Confidence 34445555555 4 67777777777743 34 56677777777766 6677777777777777766 35777
Q ss_pred HHHHHHHHHh----CCChHHHHHHHHHhhcc
Q 014484 390 LYLQAACLFS----LGMENDARETLKDGTNL 416 (423)
Q Consensus 390 ~~~~g~~~~~----~~~~~~A~~~~~~al~l 416 (423)
++++|.+|.. .+++++|+..|++|+++
T Consensus 128 ~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~ 158 (212)
T 3rjv_A 128 QMLLGLIYASGVHGPEDDVKASEYFKGSSSL 158 (212)
T ss_dssp HHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc
Confidence 7777777777 66777777777777665
|
| >2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=98.78 E-value=5e-08 Score=76.90 Aligned_cols=83 Identities=13% Similarity=-0.021 Sum_probs=73.3
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCc---HHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHH
Q 014484 319 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVS---PTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAA 395 (423)
Q Consensus 319 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~ 395 (423)
..+...|..++..|+|++|+..|+++++.+|+ + ..+++++|.++..+|++++|+..++++++.+|+++.+...+..
T Consensus 40 ~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~ 118 (129)
T 2xev_A 40 NALYWLGESYYATRNFQLAEAQFRDLVSRYPT-HDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQER 118 (129)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHCCC-CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHHH
Confidence 35567899999999999999999999999999 8 8899999999999999999999999999999999988877776
Q ss_pred HHHhCCC
Q 014484 396 CLFSLGM 402 (423)
Q Consensus 396 ~~~~~~~ 402 (423)
+-...++
T Consensus 119 l~~l~~~ 125 (129)
T 2xev_A 119 LQSIRLG 125 (129)
T ss_dssp HHHHC--
T ss_pred HHHHHhh
Confidence 6555444
|
| >2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis} | Back alignment and structure |
|---|
Probab=98.77 E-value=1.9e-08 Score=78.03 Aligned_cols=82 Identities=11% Similarity=-0.038 Sum_probs=70.2
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCch--HHHHHHHHH
Q 014484 319 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWP--TALYLQAAC 396 (423)
Q Consensus 319 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~--~a~~~~g~~ 396 (423)
..+...|..++..|++++|+..|+++++++|. +..+|+++|.+|..+|++++|+..++++++++|+.. .+...+...
T Consensus 20 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~l~~~ 98 (115)
T 2kat_A 20 LLRFTLGKTYAEHEQFDAALPHLRAALDFDPT-YSVAWKWLGKTLQGQGDRAGARQAWESGLAAAQSRGDQQVVKELQVF 98 (115)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccccccHHHHHHHHHH
Confidence 45677899999999999999999999999999 999999999999999999999999999999998644 444455544
Q ss_pred HHhCC
Q 014484 397 LFSLG 401 (423)
Q Consensus 397 ~~~~~ 401 (423)
+..++
T Consensus 99 l~~l~ 103 (115)
T 2kat_A 99 LRRLA 103 (115)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 44433
|
| >4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=98.76 E-value=8.7e-09 Score=98.58 Aligned_cols=100 Identities=13% Similarity=0.033 Sum_probs=68.7
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcH------HHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCc------
Q 014484 319 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSP------TVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW------ 386 (423)
Q Consensus 319 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~------~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~------ 386 (423)
..+...|..++..|++++|+..|++++++.+. .. .++.++|.+|..+|++++|+..+++++++.|+.
T Consensus 224 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 302 (411)
T 4a1s_A 224 RACGNLGNTYYLLGDFQAAIEHHQERLRIARE-FGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGEREVE 302 (411)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHHHHh-cCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 35556677777777777777777777766554 22 267777777777777777777777777766643
Q ss_pred hHHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 014484 387 PTALYLQAACLFSLGMENDARETLKDGTNLEAK 419 (423)
Q Consensus 387 ~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 419 (423)
+.+++.+|.++..+|++++|++.|++++++.+.
T Consensus 303 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 335 (411)
T 4a1s_A 303 AQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQE 335 (411)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 566777777777777777777777777765443
|
| >2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A | Back alignment and structure |
|---|
Probab=98.76 E-value=5.2e-08 Score=74.28 Aligned_cols=77 Identities=12% Similarity=-0.026 Sum_probs=69.7
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCC-------CCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHH
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGG-------TMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTAL 390 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~-------p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~ 390 (423)
+......|..++..|+|..|+..|.+|++.. +. ...++.++|.|+.++|++++|+..+++|++++|++..+.
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~-~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~ 83 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTID-KVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRAN 83 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSC-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCccc-HHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHH
Confidence 4567789999999999999999999999853 23 678999999999999999999999999999999999998
Q ss_pred HHHHH
Q 014484 391 YLQAA 395 (423)
Q Consensus 391 ~~~g~ 395 (423)
.+++.
T Consensus 84 ~n~~~ 88 (104)
T 2v5f_A 84 GNLKY 88 (104)
T ss_dssp HHHHH
T ss_pred hhHHH
Confidence 88873
|
| >3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A | Back alignment and structure |
|---|
Probab=98.75 E-value=6.8e-08 Score=89.63 Aligned_cols=61 Identities=15% Similarity=0.099 Sum_probs=54.4
Q ss_pred HHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 014484 359 RCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 359 ~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
++.++...|++++|+..+++|+.++|+ +.+|..+|.++...|++++|++.|++|+.++|..
T Consensus 283 lal~~l~~gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~ 343 (372)
T 3ly7_A 283 KAVSALVKGKTDESYQAINTGIDLEMS-WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGA 343 (372)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSH
T ss_pred HHHHHHhCCCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCc
Confidence 444455579999999999999999986 6789999999999999999999999999999974
|
| >3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.74 E-value=5.2e-08 Score=84.68 Aligned_cols=99 Identities=11% Similarity=-0.083 Sum_probs=87.2
Q ss_pred HHHHHHHHHHHh----cCCHHHHHHHHHHHhcCCCC-CcHHHHhhHHHHHHh----cCChHHHHHHHHHhHhcCCCchHH
Q 014484 319 LNSKKHGDTAFR----AKDFSTAIDCYTQFIDGGTM-VSPTVYARRCLSYLM----NDMPQEALGDAMQAQVVSPDWPTA 389 (423)
Q Consensus 319 ~~~~~~g~~~~~----~~~~~~A~~~~~~ai~~~p~-~~~~~~~~~~~~~~~----~~~~~~A~~~~~~a~~l~p~~~~a 389 (423)
......|..+.. .+++++|+..|++|++..|. .++.+++++|.+|.. .+++++|+..+++|+++ |.++.+
T Consensus 86 ~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~~~a 164 (212)
T 3rjv_A 86 SGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRTGYA 164 (212)
T ss_dssp HHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCTTHH
T ss_pred HHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCCHHH
Confidence 345567888877 89999999999999999983 158999999999999 89999999999999999 788899
Q ss_pred HHHHHHHHHhC-C-----ChHHHHHHHHHhhcccc
Q 014484 390 LYLQAACLFSL-G-----MENDARETLKDGTNLEA 418 (423)
Q Consensus 390 ~~~~g~~~~~~-~-----~~~~A~~~~~~al~l~~ 418 (423)
++++|.+|... | ++++|+.+|++|++...
T Consensus 165 ~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~~~g~ 199 (212)
T 3rjv_A 165 EYWAGMMFQQGEKGFIEPNKQKALHWLNVSCLEGF 199 (212)
T ss_dssp HHHHHHHHHHCBTTTBCCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHcCC
Confidence 99999999864 3 99999999999998754
|
| >3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* | Back alignment and structure |
|---|
Probab=98.74 E-value=3.3e-08 Score=95.34 Aligned_cols=100 Identities=12% Similarity=0.018 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcC-----CCCC--cHHHHhhHHHHHHhcCChHHHHHHHHHhHhc--------
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDG-----GTMV--SPTVYARRCLSYLMNDMPQEALGDAMQAQVV-------- 382 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~-----~p~~--~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l-------- 382 (423)
+..+......+..+|+|++|+..|++++++ .|++ -...+.|+|.+|..+|+|++|+..+++++.+
T Consensus 287 ~~~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~ 366 (429)
T 3qwp_A 287 VQESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGS 366 (429)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSS
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCC
Confidence 335555566778899999999999999975 3331 3478999999999999999999999999965
Q ss_pred CCCchHHHHHHHHHHHhCCChHHHHHHHHHhhccc
Q 014484 383 SPDWPTALYLQAACLFSLGMENDARETLKDGTNLE 417 (423)
Q Consensus 383 ~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~ 417 (423)
.|+-+..++++|.+|..+|+|++|+..|++|+++-
T Consensus 367 Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~ 401 (429)
T 3qwp_A 367 HPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIM 401 (429)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 35566799999999999999999999999999764
|
| >3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.72 E-value=1.6e-08 Score=93.16 Aligned_cols=98 Identities=11% Similarity=0.028 Sum_probs=48.9
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCC-----cHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCc------hH
Q 014484 320 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMV-----SPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW------PT 388 (423)
Q Consensus 320 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-----~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~------~~ 388 (423)
.+...|..++..|++++|+..|++++++.+.. ...++.++|.++...|++++|+..+++++++.++. ..
T Consensus 185 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 264 (338)
T 3ro2_A 185 AFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQ 264 (338)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhcchhHHHH
Confidence 34444555555555555555555555443320 11245555555555555555555555555444433 44
Q ss_pred HHHHHHHHHHhCCChHHHHHHHHHhhccc
Q 014484 389 ALYLQAACLFSLGMENDARETLKDGTNLE 417 (423)
Q Consensus 389 a~~~~g~~~~~~~~~~~A~~~~~~al~l~ 417 (423)
+++.+|.++..+|++++|+..|++++++.
T Consensus 265 ~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 293 (338)
T 3ro2_A 265 SCYSLGNTYTLLQDYEKAIDYHLKHLAIA 293 (338)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 55555555555555555555555555443
|
| >1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=98.68 E-value=1.5e-07 Score=75.84 Aligned_cols=90 Identities=9% Similarity=-0.085 Sum_probs=83.1
Q ss_pred HHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHh----cCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHh
Q 014484 324 HGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLM----NDMPQEALGDAMQAQVVSPDWPTALYLQAACLFS 399 (423)
Q Consensus 324 ~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~ 399 (423)
.|..+...+..++|++.|++|.+. . ++.+++++|.+|.. .+++++|+..+++|.+. .++.+++++|.+|..
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~--g-~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~ 105 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACEL--N-SGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYA 105 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcC--C-CHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--CCHHHHHHHHHHHHC
Confidence 677777888899999999999987 5 88999999999999 89999999999999987 789999999999999
Q ss_pred ----CCChHHHHHHHHHhhcccc
Q 014484 400 ----LGMENDARETLKDGTNLEA 418 (423)
Q Consensus 400 ----~~~~~~A~~~~~~al~l~~ 418 (423)
.+++++|+++|++|.+...
T Consensus 106 G~g~~~d~~~A~~~~~~Aa~~g~ 128 (138)
T 1klx_A 106 GKGVVKNEKQAVKTFEKACRLGS 128 (138)
T ss_dssp TSSSCCCHHHHHHHHHHHHHTTC
T ss_pred CCCCCcCHHHHHHHHHHHHHCCC
Confidence 9999999999999998754
|
| >4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=98.65 E-value=5.8e-08 Score=87.31 Aligned_cols=96 Identities=9% Similarity=0.058 Sum_probs=85.1
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCC-c-hHHHHHHHHHH
Q 014484 320 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPD-W-PTALYLQAACL 397 (423)
Q Consensus 320 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~-~-~~a~~~~g~~~ 397 (423)
-....|..+...|+|++|.+.|+.++...|. +. +++.+|.++.+.++|++|+..+++++...+. . ..+++++|.++
T Consensus 104 l~LayA~~L~~~g~y~eA~~~l~~~~~~~p~-~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al 181 (282)
T 4f3v_A 104 ITMGFAACEAAQGNYADAMEALEAAPVAGSE-HL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAA 181 (282)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHTSSCCTTCH-HH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhcCCc-hH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHH
Confidence 3445688899999999999999999999998 77 9999999999999999999999999886422 2 45999999999
Q ss_pred HhCCChHHHHHHHHHhhccc
Q 014484 398 FSLGMENDARETLKDGTNLE 417 (423)
Q Consensus 398 ~~~~~~~~A~~~~~~al~l~ 417 (423)
..+|++++|+..|++++.-.
T Consensus 182 ~~LG~~~eAl~~l~~a~~g~ 201 (282)
T 4f3v_A 182 ANLALFTEAERRLTEANDSP 201 (282)
T ss_dssp HHTTCHHHHHHHHHHHHTST
T ss_pred HHCCCHHHHHHHHHHHhcCC
Confidence 99999999999999998543
|
| >1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A | Back alignment and structure |
|---|
Probab=98.62 E-value=5.4e-08 Score=76.38 Aligned_cols=69 Identities=19% Similarity=0.073 Sum_probs=65.7
Q ss_pred cHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 014484 352 SPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
.+..++.+|.++...|++++|+..++++++++|+++.+++++|.++..+|++++|+..|+++++++|..
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 71 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGREN 71 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcccc
Confidence 567899999999999999999999999999999999999999999999999999999999999998754
|
| >2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=98.56 E-value=2.7e-07 Score=91.82 Aligned_cols=100 Identities=8% Similarity=-0.144 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHh-------cCCHH-------HHHHHHHHHhc-CCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcC
Q 014484 319 LNSKKHGDTAFR-------AKDFS-------TAIDCYTQFID-GGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVS 383 (423)
Q Consensus 319 ~~~~~~g~~~~~-------~~~~~-------~A~~~~~~ai~-~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~ 383 (423)
..+...|..+.+ .|+++ +|+..|++|++ ..|+ +..+|.+++..+.+.|++++|...|+++++++
T Consensus 273 ~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~-~~~l~~~~~~~~~~~g~~~~A~~~~~~al~~~ 351 (530)
T 2ooe_A 273 DIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKK-NMLLYFAYADYEESRMKYEKVHSIYNRLLAIE 351 (530)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSS-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHhcCCHHHHHHHHHHHhCcc
Confidence 355566666664 68876 88999999997 7888 88999999999999999999999999999998
Q ss_pred CCch-HHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 014484 384 PDWP-TALYLQAACLFSLGMENDARETLKDGTNLEAK 419 (423)
Q Consensus 384 p~~~-~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 419 (423)
|+++ .+|..+|.++..+|++++|++.|++|++..|.
T Consensus 352 p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~ 388 (530)
T 2ooe_A 352 DIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDART 388 (530)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTC
T ss_pred ccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCC
Confidence 8875 68888888888888888888888888876653
|
| >1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2 | Back alignment and structure |
|---|
Probab=98.51 E-value=4.3e-07 Score=85.69 Aligned_cols=100 Identities=17% Similarity=0.067 Sum_probs=87.7
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCC--------CCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCC----
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGG--------TMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPD---- 385 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~--------p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~---- 385 (423)
+..+...|..++..|++++|+..|++++++. |. ...++.++|.++...|++++|+..+++++.+.|.
T Consensus 93 ~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 171 (373)
T 1hz4_A 93 LWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPM-HEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQ 171 (373)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGG
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcH-HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcH
Confidence 3456678999999999999999999999864 33 4578889999999999999999999999998775
Q ss_pred -chHHHHHHHHHHHhCCChHHHHHHHHHhhcccc
Q 014484 386 -WPTALYLQAACLFSLGMENDARETLKDGTNLEA 418 (423)
Q Consensus 386 -~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 418 (423)
...++..+|.++...|++++|+..+++++++.+
T Consensus 172 ~~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~ 205 (373)
T 1hz4_A 172 QQLQCLAMLIQCSLARGDLDNARSQLNRLENLLG 205 (373)
T ss_dssp GGHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHh
Confidence 356899999999999999999999999987743
|
| >1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2 | Back alignment and structure |
|---|
Probab=98.51 E-value=2e-07 Score=88.03 Aligned_cols=101 Identities=10% Similarity=0.081 Sum_probs=87.0
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCC-c----HHHHhhHHHHHHhcCChHHHHHHHHHhHhcC--------CC
Q 014484 319 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMV-S----PTVYARRCLSYLMNDMPQEALGDAMQAQVVS--------PD 385 (423)
Q Consensus 319 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-~----~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~--------p~ 385 (423)
..+...|..++..|++++|+..+.+++++.|.. + ..++.++|.++...|++++|+..+++++++. |.
T Consensus 54 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~ 133 (373)
T 1hz4_A 54 VATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPM 133 (373)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTH
T ss_pred HHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcH
Confidence 345678899999999999999999999876541 1 2457899999999999999999999999875 45
Q ss_pred chHHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 014484 386 WPTALYLQAACLFSLGMENDARETLKDGTNLEAK 419 (423)
Q Consensus 386 ~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 419 (423)
...++.++|.++..+|++++|+..+++++++.+.
T Consensus 134 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 167 (373)
T 1hz4_A 134 HEFLVRIRAQLLWAWARLDEAEASARSGIEVLSS 167 (373)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhc
Confidence 6778899999999999999999999999987664
|
| >2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=98.45 E-value=6.4e-07 Score=89.05 Aligned_cols=98 Identities=14% Similarity=0.050 Sum_probs=69.8
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHH-HHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHH
Q 014484 320 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLS-YLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLF 398 (423)
Q Consensus 320 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~-~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~ 398 (423)
.+...|....+.|++++|.+.|.+|++..|. ....+...+.. +...|++++|...|+++++.+|+++.+|..+|..+.
T Consensus 358 ~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~-~~~~~~~~a~~~~~~~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~~ 436 (530)
T 2ooe_A 358 VYIQYMKFARRAEGIKSGRMIFKKAREDART-RHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLS 436 (530)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCTTC-CTHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhccCC-chHHHHHHHHHHHHHcCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Confidence 4455555556666677777777777766665 55555544433 345788888888888888888888888888888888
Q ss_pred hCCChHHHHHHHHHhhcccc
Q 014484 399 SLGMENDARETLKDGTNLEA 418 (423)
Q Consensus 399 ~~~~~~~A~~~~~~al~l~~ 418 (423)
.+|++++|...|++|++..|
T Consensus 437 ~~g~~~~Ar~~~~~al~~~~ 456 (530)
T 2ooe_A 437 HLNEDNNTRVLFERVLTSGS 456 (530)
T ss_dssp TTTCHHHHHHHHHHHHHSCC
T ss_pred hCCCHhhHHHHHHHHHhccC
Confidence 88888888888888887643
|
| >3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A* | Back alignment and structure |
|---|
Probab=98.43 E-value=6.7e-07 Score=79.67 Aligned_cols=86 Identities=13% Similarity=0.016 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHhcCCCC-CcHHHHhhHHHHHHhc-----CChHHHHHHHHHhHhcCCCc-hHHHHHHHHHHHh-CCChHH
Q 014484 334 FSTAIDCYTQFIDGGTM-VSPTVYARRCLSYLMN-----DMPQEALGDAMQAQVVSPDW-PTALYLQAACLFS-LGMEND 405 (423)
Q Consensus 334 ~~~A~~~~~~ai~~~p~-~~~~~~~~~~~~~~~~-----~~~~~A~~~~~~a~~l~p~~-~~a~~~~g~~~~~-~~~~~~ 405 (423)
..+|...+++||++||+ .+..+|..+|..|.+. |+.++|..+|++|++++|+. ..+++..|..+.. +|++++
T Consensus 179 l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd~~~ 258 (301)
T 3u64_A 179 VHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNNRAG 258 (301)
T ss_dssp HHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTCHHH
T ss_pred HHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCCHHH
Confidence 57899999999999998 1345999999999995 99999999999999999975 9999999999988 499999
Q ss_pred HHHHHHHhhccccc
Q 014484 406 ARETLKDGTNLEAK 419 (423)
Q Consensus 406 A~~~~~~al~l~~~ 419 (423)
|.+.+++|+..+|.
T Consensus 259 a~~~L~kAL~a~p~ 272 (301)
T 3u64_A 259 FDEALDRALAIDPE 272 (301)
T ss_dssp HHHHHHHHHHCCGG
T ss_pred HHHHHHHHHcCCCC
Confidence 99999999999887
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=98.38 E-value=2.1e-06 Score=79.00 Aligned_cols=118 Identities=14% Similarity=0.040 Sum_probs=79.1
Q ss_pred cceeeeeecCCChhhHHHHHHHHHHHhcCCCC---CccceEeEEE-eCCceeEEEecCCCCCHHhhhccCCCCCCCHHHH
Q 014484 14 HCHLKSSVLESSDLGETLNLEEAKAVGNLRSE---RLANLIGCCY-EADERLLVAEFMPNETLAKHLFHWETQPMKWAMR 89 (423)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~-~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~ 89 (423)
+..+.+++ .........+.+|.++|..|.+. .+++++.++. ..+..++|||+++|.+|.+... ..++....
T Consensus 39 g~~~VlR~-~~~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~l~~~~~----~~l~~~~~ 113 (306)
T 3tdw_A 39 NGDWVFRF-PKSQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQILGEDGM----AVLPDDAK 113 (306)
T ss_dssp TTTEEEEE-ESSHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEECHHHHH----TTSCHHHH
T ss_pred CCEEEEEe-cCCchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeECchhhh----hhCCHHHH
Confidence 55555555 23333456788999999999642 3677777775 3455789999999988876321 12344444
Q ss_pred HHHHHHHHHHHHHHHcC------------------------------------------------------------CCe
Q 014484 90 LRVALYLAQALEYCSSK------------------------------------------------------------GRA 109 (423)
Q Consensus 90 ~~i~~qi~~~l~~lH~~------------------------------------------------------------~~i 109 (423)
..++.++...|..||+. . +
T Consensus 114 ~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~~~~~~~~~~-~ 192 (306)
T 3tdw_A 114 DRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLRFQSYMTHPVYTRYTPR-L 192 (306)
T ss_dssp HHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHCHHHHCCCCE-E
T ss_pred HHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHhCcccccCCCe-e
Confidence 45555555555444431 2 6
Q ss_pred eeccCCCCCeeecC---CCCe-EEcccccccc
Q 014484 110 LYHDLNAYRILFDK---DGNP-RLSSFGLMKN 137 (423)
Q Consensus 110 iH~dlkp~Nill~~---~~~~-kl~Dfg~~~~ 137 (423)
+|+|++|.||+++. ++.+ .|+||+.+..
T Consensus 193 ~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 193 IHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp ECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred EeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 99999999999987 4554 7999997643
|
| >3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.37 E-value=5e-07 Score=88.43 Aligned_cols=99 Identities=10% Similarity=0.002 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHhcC-----CCCC--cHHHHhhHHHHHHhcCChHHHHHHHHHhHhc-----CC
Q 014484 317 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDG-----GTMV--SPTVYARRCLSYLMNDMPQEALGDAMQAQVV-----SP 384 (423)
Q Consensus 317 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~-----~p~~--~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l-----~p 384 (423)
.+..+...|..+..+|+|++|+.+|++++++ .|++ -...++|+|.+|..+|+|++|+..+++|+++ -|
T Consensus 350 ~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~ 429 (490)
T 3n71_A 350 VLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGP 429 (490)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCT
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCC
Confidence 3446778899999999999999999999964 3331 4578999999999999999999999999965 45
Q ss_pred Cc---hHHHHHHHHHHHhCCChHHHHHHHHHhhc
Q 014484 385 DW---PTALYLQAACLFSLGMENDARETLKDGTN 415 (423)
Q Consensus 385 ~~---~~a~~~~g~~~~~~~~~~~A~~~~~~al~ 415 (423)
++ ++..-+++.++..+++|++|...|++|.+
T Consensus 430 ~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~ 463 (490)
T 3n71_A 430 SHPITKDLEAMRMQTEMELRMFRQNEFMYHKMRE 463 (490)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 54 55778899999999999999999999864
|
| >3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens} | Back alignment and structure |
|---|
Probab=98.37 E-value=1.2e-06 Score=85.26 Aligned_cols=92 Identities=11% Similarity=0.032 Sum_probs=57.4
Q ss_pred HHHHHHHHHhcC---CHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhc----CChHHHHHHHHHhHhcCCCchHHHHHH
Q 014484 321 SKKHGDTAFRAK---DFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMN----DMPQEALGDAMQAQVVSPDWPTALYLQ 393 (423)
Q Consensus 321 ~~~~g~~~~~~~---~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~----~~~~~A~~~~~~a~~l~p~~~~a~~~~ 393 (423)
+...|..+...| ++++|+..|.++.+..|. ....++++|.+|... +++++|+..|+++. |+++.+++++
T Consensus 179 ~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~-~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~~a~~~L 254 (452)
T 3e4b_A 179 YVELATVYQKKQQPEQQAELLKQMEAGVSRGTV-TAQRVDSVARVLGDATLGTPDEKTAQALLEKIA---PGYPASWVSL 254 (452)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCS-CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGSTHHHHHH
T ss_pred HHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCHHHHHHH
Confidence 344556666666 666666666666666666 666666666666554 56666666666666 6666666666
Q ss_pred HHH-H--HhCCChHHHHHHHHHhhcc
Q 014484 394 AAC-L--FSLGMENDARETLKDGTNL 416 (423)
Q Consensus 394 g~~-~--~~~~~~~~A~~~~~~al~l 416 (423)
|.+ + ...+++++|++.|++|++.
T Consensus 255 g~~~~~~~~~~d~~~A~~~~~~Aa~~ 280 (452)
T 3e4b_A 255 AQLLYDFPELGDVEQMMKYLDNGRAA 280 (452)
T ss_dssp HHHHHHSGGGCCHHHHHHHHHHHHHT
T ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHC
Confidence 666 3 3556666666666666644
|
| >4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A* | Back alignment and structure |
|---|
Probab=98.36 E-value=9.7e-07 Score=79.61 Aligned_cols=122 Identities=15% Similarity=-0.002 Sum_probs=83.0
Q ss_pred cceeeee--cceeeeeecCCChhhHHHHHHHHHHHhcCC-CCCccceEeEEEeCCceeEEEecCCCCCHHhhhccCCCCC
Q 014484 7 KFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNLR-SERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQP 83 (423)
Q Consensus 7 v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~ 83 (423)
||+.... +..+.+|+-... ....+.+|...|..|. +--+.+++.++.+++..++|||+++|.++.+....
T Consensus 41 v~rl~~~~~~~~~~lk~~~~~--~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~~~~~----- 113 (272)
T 4gkh_A 41 IYRLYGKPNAPELFLKHGKGS--VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQVLEE----- 113 (272)
T ss_dssp EEEEECCTTCCCEEEEEEETH--HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHHHHHH-----
T ss_pred EEEEEecCCCeEEEEEECCCC--CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccccccccC-----
Confidence 5654432 334455543322 3456788999998884 33488999999999999999999999888775521
Q ss_pred CCHHHHHHHHHHHHHHHHHHHcC-------------------------------------------------------C-
Q 014484 84 MKWAMRLRVALYLAQALEYCSSK-------------------------------------------------------G- 107 (423)
Q Consensus 84 ~~~~~~~~i~~qi~~~l~~lH~~-------------------------------------------------------~- 107 (423)
.......+..++...|..||.. .
T Consensus 114 -~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 192 (272)
T 4gkh_A 114 -YPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKLLPFSPD 192 (272)
T ss_dssp -CGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHHHTTCCCCCC
T ss_pred -CHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHHHhcccccCC
Confidence 1122234555555555555531 0
Q ss_pred -CeeeccCCCCCeeecCCCCeEEccccccc
Q 014484 108 -RALYHDLNAYRILFDKDGNPRLSSFGLMK 136 (423)
Q Consensus 108 -~iiH~dlkp~Nill~~~~~~kl~Dfg~~~ 136 (423)
.++|+|+.+.||+++.++.+-|+||+.+.
T Consensus 193 ~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 193 SVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp EEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred cEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 16899999999999987767799998753
|
| >2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A | Back alignment and structure |
|---|
Probab=98.33 E-value=1.9e-06 Score=65.40 Aligned_cols=69 Identities=12% Similarity=-0.133 Sum_probs=62.3
Q ss_pred cHHHHhhHHHHHHhcCChHHHHHHHHHhHhcC-------CCchHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 014484 352 SPTVYARRCLSYLMNDMPQEALGDAMQAQVVS-------PDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~-------p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
++.-.+.+|..++..++|..|+.-+++|++.. +..+..+..+|.+++++|++++|+..+++|++++|.+
T Consensus 4 sa~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~ 79 (104)
T 2v5f_A 4 TAEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEH 79 (104)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred CHHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCC
Confidence 34566789999999999999999999999863 4678899999999999999999999999999999975
|
| >2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.32 E-value=3.1e-06 Score=83.20 Aligned_cols=94 Identities=11% Similarity=-0.016 Sum_probs=81.4
Q ss_pred HHHHHHHHHHhcC---CHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHh----cCChHHHHHHHHHhHhcCCCchHHHHH
Q 014484 320 NSKKHGDTAFRAK---DFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLM----NDMPQEALGDAMQAQVVSPDWPTALYL 392 (423)
Q Consensus 320 ~~~~~g~~~~~~~---~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~a~~l~p~~~~a~~~ 392 (423)
.+...|..+...| ++++|+..|++|++. . +..+++++|.+|.. .+++++|+..+++|++. +++.++++
T Consensus 330 a~~~lg~~y~~~g~~~~~~~A~~~~~~a~~~--~-~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~ 404 (490)
T 2xm6_A 330 AQANLGAIYFRLGSEEEHKKAVEWFRKAAAK--G-EKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQ--GLSAAQVQ 404 (490)
T ss_dssp HHHHHHHHHHHSCCHHHHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHH
T ss_pred HHHHHHHHHHhCCCcccHHHHHHHHHHHHHC--C-CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhC--CCHHHHHH
Confidence 4455677777655 899999999999987 4 78899999999999 89999999999999986 46899999
Q ss_pred HHHHHHh----CCChHHHHHHHHHhhcccc
Q 014484 393 QAACLFS----LGMENDARETLKDGTNLEA 418 (423)
Q Consensus 393 ~g~~~~~----~~~~~~A~~~~~~al~l~~ 418 (423)
+|.+|.. .+++++|+.+|++|++.++
T Consensus 405 Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~ 434 (490)
T 2xm6_A 405 LGEIYYYGLGVERDYVQAWAWFDTASTNDM 434 (490)
T ss_dssp HHHHHHHTSSSCCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHcCCCCCCCHHHHHHHHHHHHHCCC
Confidence 9999998 8999999999999998873
|
| >1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=98.30 E-value=1.8e-06 Score=69.38 Aligned_cols=79 Identities=14% Similarity=0.004 Sum_probs=71.3
Q ss_pred CCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHh----CCChHHHH
Q 014484 332 KDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFS----LGMENDAR 407 (423)
Q Consensus 332 ~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~----~~~~~~A~ 407 (423)
+|+++|+..|+++.+.... ... +|.+|...+.+++|+..+++|.+. .++.+++++|.+|.. .+++++|+
T Consensus 9 ~d~~~A~~~~~~aa~~g~~-~a~----lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~ 81 (138)
T 1klx_A 9 KDLKKAIQYYVKACELNEM-FGC----LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKAA 81 (138)
T ss_dssp HHHHHHHHHHHHHHHTTCT-THH----HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHH
T ss_pred cCHHHHHHHHHHHHcCCCH-hhh----HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHHH
Confidence 5789999999999998754 333 999999999999999999999998 789999999999999 89999999
Q ss_pred HHHHHhhccc
Q 014484 408 ETLKDGTNLE 417 (423)
Q Consensus 408 ~~~~~al~l~ 417 (423)
+.|++|.+..
T Consensus 82 ~~~~~Aa~~g 91 (138)
T 1klx_A 82 QYYSKACGLN 91 (138)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHcCC
Confidence 9999998763
|
| >3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.30 E-value=2.3e-06 Score=63.49 Aligned_cols=68 Identities=7% Similarity=-0.103 Sum_probs=60.8
Q ss_pred HHHHHHHHHHHHhcCC---HHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCc
Q 014484 318 TLNSKKHGDTAFRAKD---FSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW 386 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~---~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~ 386 (423)
+..+...|..++..++ .++|...+++|++++|+ +..++..+|..+++.|+|++|+..++++++.+|..
T Consensus 6 ~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~-~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~ 76 (93)
T 3bee_A 6 ATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPY-NEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPN 76 (93)
T ss_dssp HHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTT
T ss_pred HHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 3455667888865555 79999999999999999 99999999999999999999999999999999984
|
| >2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.24 E-value=8e-06 Score=80.20 Aligned_cols=96 Identities=14% Similarity=-0.025 Sum_probs=81.9
Q ss_pred HHHHHHHHHHHHHh----cCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHh----cCChHHHHHHHHHhHhcCCCchH
Q 014484 317 ETLNSKKHGDTAFR----AKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLM----NDMPQEALGDAMQAQVVSPDWPT 388 (423)
Q Consensus 317 ~~~~~~~~g~~~~~----~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~a~~l~p~~~~ 388 (423)
.+..+...|..+.. .+++++|+..|.+|++. . +..+++++|.+|.. .+++++|+..+++|++. +++.
T Consensus 74 ~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~-~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~~~~ 148 (490)
T 2xm6_A 74 YTPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALK--G-LPQAQQNLGVMYHEGNGVKVDKAESVKWFRLAAEQ--GRDS 148 (490)
T ss_dssp CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHH
T ss_pred CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--C-CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCHH
Confidence 34456678888888 89999999999999875 4 67888999999988 88999999999999875 5789
Q ss_pred HHHHHHHHHHh----CCChHHHHHHHHHhhccc
Q 014484 389 ALYLQAACLFS----LGMENDARETLKDGTNLE 417 (423)
Q Consensus 389 a~~~~g~~~~~----~~~~~~A~~~~~~al~l~ 417 (423)
+++++|.+|.. .+++++|++.|++|++.+
T Consensus 149 a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~~ 181 (490)
T 2xm6_A 149 GQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQG 181 (490)
T ss_dssp HHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC
Confidence 99999999988 889999999999998754
|
| >1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=98.23 E-value=2.7e-06 Score=68.45 Aligned_cols=79 Identities=13% Similarity=-0.031 Sum_probs=68.8
Q ss_pred HHHHHHHHHHHhcC---CHHHHHHHHHHHhcCC-CCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHH
Q 014484 319 LNSKKHGDTAFRAK---DFSTAIDCYTQFIDGG-TMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQA 394 (423)
Q Consensus 319 ~~~~~~g~~~~~~~---~~~~A~~~~~~ai~~~-p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g 394 (423)
...++.|..+.+.+ +.++|+..+++.++.+ |....++++++|..|+++|+|++|.++++++++++|+|..|..-+-
T Consensus 33 ~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n~QA~~Lk~ 112 (152)
T 1pc2_A 33 STQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELER 112 (152)
T ss_dssp HHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 34566788888877 7889999999999999 7327899999999999999999999999999999999999887765
Q ss_pred HHH
Q 014484 395 ACL 397 (423)
Q Consensus 395 ~~~ 397 (423)
.+-
T Consensus 113 ~ie 115 (152)
T 1pc2_A 113 LID 115 (152)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
|
| >1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A | Back alignment and structure |
|---|
Probab=98.17 E-value=5.2e-06 Score=64.36 Aligned_cols=88 Identities=9% Similarity=0.029 Sum_probs=75.3
Q ss_pred CHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHH---HHHHHHHhHhcC-C-CchHHHHHHHHHHHhCCChHHHH
Q 014484 333 DFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQE---ALGDAMQAQVVS-P-DWPTALYLQAACLFSLGMENDAR 407 (423)
Q Consensus 333 ~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~---A~~~~~~a~~l~-p-~~~~a~~~~g~~~~~~~~~~~A~ 407 (423)
....+.+.|.++++.++. +..+.++.|.++.+..+..+ ++..++..+.-+ | +.-+.+|.+|.+++++|+|++|+
T Consensus 16 ~l~~~~~~y~~e~~~~~~-s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~ 94 (126)
T 1nzn_A 16 DLLKFEKKFQSEKAAGSV-SKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKAL 94 (126)
T ss_dssp HHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHhccCCC-cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHH
Confidence 345677778888877777 89999999999999888777 999999988887 5 67789999999999999999999
Q ss_pred HHHHHhhccccccC
Q 014484 408 ETLKDGTNLEAKKN 421 (423)
Q Consensus 408 ~~~~~al~l~~~~~ 421 (423)
+.++..|+.+|.+.
T Consensus 95 ~~~~~lL~~eP~n~ 108 (126)
T 1nzn_A 95 KYVRGLLQTEPQNN 108 (126)
T ss_dssp HHHHHHHHHCTTCH
T ss_pred HHHHHHHHhCCCCH
Confidence 99999999999763
|
| >2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A | Back alignment and structure |
|---|
Probab=98.14 E-value=8.8e-06 Score=69.24 Aligned_cols=139 Identities=12% Similarity=0.059 Sum_probs=92.5
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHc-CCCeeeccCCCCCeeecCCCCeEEccccccccCCCCCccccCcc
Q 014484 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSS-KGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLA 149 (423)
Q Consensus 71 ~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~t~~ 149 (423)
||.+.++- .+++++++++|.++.|.+.+|.-+-. +. -..+=+.|..|++..+|++.+.+ +. .......
T Consensus 34 SL~eIL~~-~~~PlsEEqaWALc~Qc~~~L~~~~~~~~-~~~~i~~~~~i~l~~dG~V~f~~-~~--------s~~~~~~ 102 (229)
T 2yle_A 34 SLEEILRL-YNQPINEEQAWAVCYQCCGSLRAAARRRQ-PRHRVRSAAQIRVWRDGAVTLAP-AA--------DDAGEPP 102 (229)
T ss_dssp EHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTTC-CCCCCCSGGGEEEETTSCEEECC-C----------------
T ss_pred cHHHHHHH-cCCCcCHHHHHHHHHHHHHHHHhhhhccc-CCceecCCcceEEecCCceeccc-cc--------ccccccC
Confidence 78888863 57899999999999999999887722 11 12334567899999999987663 11 1112335
Q ss_pred cCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhccc--
Q 014484 150 FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQS-- 227 (423)
Q Consensus 150 y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~-- 227 (423)
+.|||... ...+.+.-|||||+++|.-+.-..+.. -...+|++|.+||..|..-
T Consensus 103 ~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e~-----------------------eE~eLS~~LE~LL~~Mt~~~~ 158 (229)
T 2yle_A 103 PVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKEN-----------------------EERELSPPLEQLIDHMANTVE 158 (229)
T ss_dssp ----CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCTT-----------------------EEECCCHHHHHHHHHHTTCCC
T ss_pred CCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCcc-----------------------cchhhCHHHHHHHHHHHhccc
Confidence 66888764 344567789999999999886653322 1234567899999999765
Q ss_pred -----------------------CcCCCCCHHHHHHHHHh
Q 014484 228 -----------------------EARERPNAKSLVISLMS 244 (423)
Q Consensus 228 -----------------------dp~~Rps~~~vl~~l~~ 244 (423)
.+..|+++++|++.-..
T Consensus 159 d~~~~DeG~~~~~eg~~d~~~~~~~~~~~sl~~Vi~~C~~ 198 (229)
T 2yle_A 159 ADGSNDEGYEAAEEGLGDEDEKRKISAIRSYRDVMKLCAA 198 (229)
T ss_dssp --------------------CCSCCCCCCSHHHHHHHHHT
T ss_pred ccccccccccccccccccccccccccCcCCHHHHHHHHHh
Confidence 24578899998876544
|
| >4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.12 E-value=3e-06 Score=81.48 Aligned_cols=99 Identities=8% Similarity=0.013 Sum_probs=80.2
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcH-----------------HHHhhHHHHHHhcCChHHHHHHHHHhHhc
Q 014484 320 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSP-----------------TVYARRCLSYLMNDMPQEALGDAMQAQVV 382 (423)
Q Consensus 320 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~-----------------~~~~~~~~~~~~~~~~~~A~~~~~~a~~l 382 (423)
...++|..+++.|+|++|++.|.++++.+|. .. .++.++|.+|...|++++|++.+.+++.+
T Consensus 6 ~~l~~a~~l~~~~~y~eA~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~ 84 (434)
T 4b4t_Q 6 SKLEEARRLVNEKQYNEAEQVYLSLLDKDSS-QSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEY 84 (434)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHSCCC-SSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhhCcc-cchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 4567888999999999999999999998886 32 46889999999999999999999999987
Q ss_pred CCCchH------HHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 014484 383 SPDWPT------ALYLQAACLFSLGMENDARETLKDGTNLEAK 419 (423)
Q Consensus 383 ~p~~~~------a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 419 (423)
.+...+ ....+|.++...|++++|++.++++++..+.
T Consensus 85 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~ 127 (434)
T 4b4t_Q 85 MMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKR 127 (434)
T ss_dssp HHTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 665444 3445677777788888888888888766544
|
| >1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A | Back alignment and structure |
|---|
Probab=98.11 E-value=1.4e-05 Score=85.30 Aligned_cols=90 Identities=17% Similarity=0.190 Sum_probs=76.1
Q ss_pred HHHHHHhcCCHHHHHHHHHHHh--------------------cC--CCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHh
Q 014484 324 HGDTAFRAKDFSTAIDCYTQFI--------------------DG--GTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQV 381 (423)
Q Consensus 324 ~g~~~~~~~~~~~A~~~~~~ai--------------------~~--~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~ 381 (423)
.|..+...|.|++|...|+++- +. ..+ .+.+|+++|.++...|++++|+..|.+|
T Consensus 1055 IA~Iai~lglyEEAf~IYkKa~~~~~A~~VLie~i~nldrAiE~Aervn-~p~vWsqLAKAql~~G~~kEAIdsYiKA-- 1131 (1630)
T 1xi4_A 1055 IANIAISNELFEEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAERCN-EPAVWSQLAKAQLQKGMVKEAIDSYIKA-- 1131 (1630)
T ss_pred HHHHHHhCCCHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHHHhcC-CHHHHHHHHHHHHhCCCHHHHHHHHHhc--
Confidence 3777777777777777776653 11 234 6789999999999999999999999887
Q ss_pred cCCCchHHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 014484 382 VSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAK 419 (423)
Q Consensus 382 l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 419 (423)
+++.+|++.|.++.++|+|++|++.|+.|.+.++.
T Consensus 1132 ---dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e 1166 (1630)
T 1xi4_A 1132 ---DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARE 1166 (1630)
T ss_pred ---CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhccc
Confidence 88999999999999999999999999999987743
|
| >3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens} | Back alignment and structure |
|---|
Probab=98.09 E-value=1.6e-05 Score=77.29 Aligned_cols=80 Identities=11% Similarity=-0.057 Sum_probs=48.5
Q ss_pred hcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcC-----ChHHHHHHHHHhHhcCCCchHHHHHHHHHHHh----C
Q 014484 330 RAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMND-----MPQEALGDAMQAQVVSPDWPTALYLQAACLFS----L 400 (423)
Q Consensus 330 ~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~-----~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~----~ 400 (423)
..+++++|+..|++|++. . ++.+++++|.+|. .| ++++|+..|++|+ |+++.+++++|.+|.. .
T Consensus 263 ~~~d~~~A~~~~~~Aa~~--g-~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa---~g~~~A~~~Lg~~y~~G~g~~ 335 (452)
T 3e4b_A 263 ELGDVEQMMKYLDNGRAA--D-QPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV---GREVAADYYLGQIYRRGYLGK 335 (452)
T ss_dssp GGCCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT---TTCHHHHHHHHHHHHTTTTSS
T ss_pred CCCCHHHHHHHHHHHHHC--C-CHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh---CCCHHHHHHHHHHHHCCCCCC
Confidence 456666666666666543 3 5566666666665 33 6666666666666 6666666666666555 3
Q ss_pred CChHHHHHHHHHhhcc
Q 014484 401 GMENDARETLKDGTNL 416 (423)
Q Consensus 401 ~~~~~A~~~~~~al~l 416 (423)
.++++|+.+|++|.+.
T Consensus 336 ~d~~~A~~~~~~Aa~~ 351 (452)
T 3e4b_A 336 VYPQKALDHLLTAARN 351 (452)
T ss_dssp CCHHHHHHHHHHHHTT
T ss_pred cCHHHHHHHHHHHHhh
Confidence 3666666666666553
|
| >3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B | Back alignment and structure |
|---|
Probab=98.00 E-value=2.6e-05 Score=70.93 Aligned_cols=93 Identities=14% Similarity=0.032 Sum_probs=77.5
Q ss_pred HHHHHHHhcC--CHHHHHHHHHHHhcCCCC-CcHHHHhhHHHHHHhcCChHHHHHHHHHhHhc----------CCCchHH
Q 014484 323 KHGDTAFRAK--DFSTAIDCYTQFIDGGTM-VSPTVYARRCLSYLMNDMPQEALGDAMQAQVV----------SPDWPTA 389 (423)
Q Consensus 323 ~~g~~~~~~~--~~~~A~~~~~~ai~~~p~-~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l----------~p~~~~a 389 (423)
..|...+..| ++++|...|+++.+..|+ .....+++ |+.++|++++|.+++++++++ +|+++.+
T Consensus 181 aea~v~l~~g~~~~q~A~~~f~El~~~~p~~~~~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~ 257 (310)
T 3mv2_B 181 AESYIKFATNKETATSNFYYYEELSQTFPTWKTQLGLLN---LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKPTF 257 (310)
T ss_dssp HHHHHHHHHTCSTTTHHHHHHHHHHTTSCSHHHHHHHHH---HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHHH
T ss_pred HHHHHHHHhCCccHHHHHHHHHHHHHhCCCcccHHHHHH---HHHHcCCHHHHHHHHHHHHHhcccccccccCCCCCHHH
Confidence 3454455555 999999999999888885 12335555 899999999999999988877 5999999
Q ss_pred HHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 014484 390 LYLQAACLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 390 ~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
+.++..+.+.+|+ +|.+.++++.+++|++
T Consensus 258 LaN~i~l~~~lgk--~a~~l~~qL~~~~P~h 286 (310)
T 3mv2_B 258 LANQITLALMQGL--DTEDLTNQLVKLDHEH 286 (310)
T ss_dssp HHHHHHHHHHTTC--TTHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHhCh--HHHHHHHHHHHhCCCC
Confidence 9999999999998 8999999999999874
|
| >3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A* | Back alignment and structure |
|---|
Probab=98.00 E-value=1.3e-05 Score=75.22 Aligned_cols=45 Identities=0% Similarity=-0.091 Sum_probs=34.1
Q ss_pred HHHHHHHHHHhcCC-C--CCccceEeEEEeC---CceeEEEecCCCCCHHh
Q 014484 30 TLNLEEAKAVGNLR-S--ERLANLIGCCYEA---DERLLVAEFMPNETLAK 74 (423)
Q Consensus 30 ~~~~~E~~~l~~l~-h--~niv~~~~~~~~~---~~~~lv~e~~~~~~L~~ 74 (423)
..+.+|+.++..|. + -.+++++.++.+. +..++|||+++|.++.+
T Consensus 72 ~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 72 YRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVLGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp CCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTTSSCEEEEECCCCBCCCB
T ss_pred hHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCccCCceEEEEecCCCChhh
Confidence 46778999998883 2 3578888888765 34689999999977653
|
| >3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B | Back alignment and structure |
|---|
Probab=98.00 E-value=4.3e-05 Score=69.52 Aligned_cols=96 Identities=9% Similarity=-0.068 Sum_probs=73.5
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHhcCCC--CCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCC----chHHHHHHHH
Q 014484 322 KKHGDTAFRAKDFSTAIDCYTQFIDGGT--MVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPD----WPTALYLQAA 395 (423)
Q Consensus 322 ~~~g~~~~~~~~~~~A~~~~~~ai~~~p--~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~----~~~a~~~~g~ 395 (423)
...|..+...|++++|++.+.++|..+| . +..++...+.+++++|+.+.|.+.+++..+.+|+ +-.....++.
T Consensus 104 ~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~-~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~Lae 182 (310)
T 3mv2_B 104 YLLATAQAILGDLDKSLETCVEGIDNDEAEG-TTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMILNLAE 182 (310)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHTSSCSTT-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHhccCCCcC-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHHHHHHH
Confidence 4578888888999999999999888887 6 7888888888888888888888888888888883 2233444443
Q ss_pred --HHHhCC--ChHHHHHHHHHhhcccc
Q 014484 396 --CLFSLG--MENDARETLKDGTNLEA 418 (423)
Q Consensus 396 --~~~~~~--~~~~A~~~~~~al~l~~ 418 (423)
+.+..| ++++|...|+++.+..|
T Consensus 183 a~v~l~~g~~~~q~A~~~f~El~~~~p 209 (310)
T 3mv2_B 183 SYIKFATNKETATSNFYYYEELSQTFP 209 (310)
T ss_dssp HHHHHHHTCSTTTHHHHHHHHHHTTSC
T ss_pred HHHHHHhCCccHHHHHHHHHHHHHhCC
Confidence 355555 88888888888776555
|
| >1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A | Back alignment and structure |
|---|
Probab=97.98 E-value=3e-05 Score=82.87 Aligned_cols=90 Identities=11% Similarity=0.031 Sum_probs=72.1
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCC------------
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPD------------ 385 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~------------ 385 (423)
...+.+.|.++...|++++|+..|.+| + ++..|.+.+.++.++|+|++|++++.+|.+..++
T Consensus 1105 p~vWsqLAKAql~~G~~kEAIdsYiKA-----d-D~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e~~Idt~LafaYA 1178 (1630)
T 1xi4_A 1105 PAVWSQLAKAQLQKGMVKEAIDSYIKA-----D-DPSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETELIFALA 1178 (1630)
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHhc-----C-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccccccHHHHHHHH
Confidence 347778999999999999999999887 6 8899999999999999999999999888766533
Q ss_pred ---------------chHHHHHHHHHHHhCCChHHHHHHHHHh
Q 014484 386 ---------------WPTALYLQAACLFSLGMENDARETLKDG 413 (423)
Q Consensus 386 ---------------~~~a~~~~g~~~~~~~~~~~A~~~~~~a 413 (423)
+...|++.|..+...|+|++|+..|.+|
T Consensus 1179 Kl~rleele~fI~~~n~ad~~~iGd~le~eg~YeeA~~~Y~kA 1221 (1630)
T 1xi4_A 1179 KTNRLAELEEFINGPNNAHIQQVGDRCYDEKMYDAAKLLYNNV 1221 (1630)
T ss_pred hhcCHHHHHHHHhCCCHHHHHHHHHHHHhcCCHHHHHHHHHhh
Confidence 2234566677777777777777776665
|
| >3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.95 E-value=4.6e-05 Score=61.69 Aligned_cols=95 Identities=16% Similarity=0.053 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCC--------CcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcC------
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTM--------VSPTVYARRCLSYLMNDMPQEALGDAMQAQVVS------ 383 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~--------~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~------ 383 (423)
...++++...++..|.|+.|+-....++.+..+ ..+.++...|.+++..++|..|...|++||++.
T Consensus 20 ~~~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~ 99 (167)
T 3ffl_A 20 HMNVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKT 99 (167)
T ss_dssp -CCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC---
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcC
Confidence 346778889999999999999999998765432 113588899999999999999999999987441
Q ss_pred -------------------CCchHHHHHHHHHHHhCCChHHHHHHHHH
Q 014484 384 -------------------PDWPTALYLQAACLFSLGMENDARETLKD 412 (423)
Q Consensus 384 -------------------p~~~~a~~~~g~~~~~~~~~~~A~~~~~~ 412 (423)
+.+.+.-|..|.||..+|++++|+..++.
T Consensus 100 ~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~ 147 (167)
T 3ffl_A 100 SKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDG 147 (167)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred CCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 12236889999999999999999998765
|
| >4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.89 E-value=2.8e-05 Score=74.52 Aligned_cols=99 Identities=7% Similarity=-0.006 Sum_probs=83.4
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHhcCCCC-----CcHHHHhhHHHHHHhcCChHHHHHHHHHhHhc------CCCchHH
Q 014484 321 SKKHGDTAFRAKDFSTAIDCYTQFIDGGTM-----VSPTVYARRCLSYLMNDMPQEALGDAMQAQVV------SPDWPTA 389 (423)
Q Consensus 321 ~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~-----~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l------~p~~~~a 389 (423)
....|..+...|++++|+..|++++...+. ....++.++|.+|...|+|++|+..+++++.. .+....+
T Consensus 98 ~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~ 177 (434)
T 4b4t_Q 98 KTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDV 177 (434)
T ss_dssp HHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHH
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHH
Confidence 344566667789999999999999865322 14678999999999999999999999999865 4566789
Q ss_pred HHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 014484 390 LYLQAACLFSLGMENDARETLKDGTNLEAK 419 (423)
Q Consensus 390 ~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 419 (423)
+...|.+|..+|+|++|...|++++.+.+.
T Consensus 178 ~~~~~~~~~~~~~~~~A~~~~~~al~~~~~ 207 (434)
T 4b4t_Q 178 HLLESKVYHKLRNLAKSKASLTAARTAANS 207 (434)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999977554
|
| >1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3 | Back alignment and structure |
|---|
Probab=97.88 E-value=2.9e-05 Score=74.02 Aligned_cols=92 Identities=16% Similarity=0.111 Sum_probs=73.6
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHH
Q 014484 319 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLF 398 (423)
Q Consensus 319 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~ 398 (423)
..+...|..+.+.|+|++|++.|.+| . ++..|...+.++...|+++.|...... |..+|++ ...+...|.
T Consensus 149 ~n~~~LA~~L~~Lg~yq~AVea~~KA-----~-~~~~Wk~v~~aCv~~~ef~lA~~~~l~-L~~~ad~---l~~lv~~Ye 218 (449)
T 1b89_A 149 SNFGRLASTLVHLGEYQAAVDGARKA-----N-STRTWKEVCFACVDGKEFRLAQMCGLH-IVVHADE---LEELINYYQ 218 (449)
T ss_dssp TCHHHHHHHHHTTTCHHHHHHHHHHH-----T-CHHHHHHHHHHHHHTTCHHHHHHTTTT-TTTCHHH---HHHHHHHHH
T ss_pred hhHHHHHHHHHHhccHHHHHHHHHHc-----C-CchhHHHHHHHHHHcCcHHHHHHHHHH-HHhCHhh---HHHHHHHHH
Confidence 57778888999999999999999998 4 677888888888888888888665554 4456655 345778899
Q ss_pred hCCChHHHHHHHHHhhcccccc
Q 014484 399 SLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 399 ~~~~~~~A~~~~~~al~l~~~~ 420 (423)
+.|++++|+..+++++.+|+..
T Consensus 219 k~G~~eEai~lLe~aL~le~ah 240 (449)
T 1b89_A 219 DRGYFEELITMLEAALGLERAH 240 (449)
T ss_dssp HTTCHHHHHHHHHHHTTSTTCC
T ss_pred HCCCHHHHHHHHHHHhCCcHHH
Confidence 9999999999999999988653
|
| >2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.73 E-value=0.00017 Score=67.05 Aligned_cols=30 Identities=7% Similarity=0.066 Sum_probs=26.5
Q ss_pred CCCeeeccCCCCCeeecCCCCeEEccccccc
Q 014484 106 KGRALYHDLNAYRILFDKDGNPRLSSFGLMK 136 (423)
Q Consensus 106 ~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~ 136 (423)
.+ ++|||+++.||+++.++.+.|+||+.+.
T Consensus 222 ~~-l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 222 PN-LCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp CC-EECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred Cc-eecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 45 9999999999999878889999999653
|
| >3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A* | Back alignment and structure |
|---|
Probab=97.72 E-value=6.8e-05 Score=66.81 Aligned_cols=78 Identities=9% Similarity=-0.050 Sum_probs=64.2
Q ss_pred HHHh-cCCCCCcHHHHhhHHHHHHh---c--C------ChHHHHHHHHHhHhcCCC--chHHHHHHHHHHHhC-----CC
Q 014484 342 TQFI-DGGTMVSPTVYARRCLSYLM---N--D------MPQEALGDAMQAQVVSPD--WPTALYLQAACLFSL-----GM 402 (423)
Q Consensus 342 ~~ai-~~~p~~~~~~~~~~~~~~~~---~--~------~~~~A~~~~~~a~~l~p~--~~~a~~~~g~~~~~~-----~~ 402 (423)
.+++ +.+|+ +..+++-.|..... . | ...+|...+++|+++||+ ++.+|..+|..|... |+
T Consensus 141 ~~~l~~~~~~-dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd 219 (301)
T 3u64_A 141 HKVLSRCTRV-DVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGG 219 (301)
T ss_dssp HHHHTTCCGG-GHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCC
T ss_pred HHHHHHcCcc-ccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCC
Confidence 4444 45677 88888877777643 2 3 246799999999999999 677999999999996 99
Q ss_pred hHHHHHHHHHhhcccccc
Q 014484 403 ENDARETLKDGTNLEAKK 420 (423)
Q Consensus 403 ~~~A~~~~~~al~l~~~~ 420 (423)
.++|.+.|++|++++|.+
T Consensus 220 ~ekA~~~ferAL~LnP~~ 237 (301)
T 3u64_A 220 MEKAHTAFEHLTRYCSAH 237 (301)
T ss_dssp HHHHHHHHHHHHHHCCTT
T ss_pred HHHHHHHHHHHHHhCCCC
Confidence 999999999999999964
|
| >3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00012 Score=67.82 Aligned_cols=74 Identities=18% Similarity=0.095 Sum_probs=62.8
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHH
Q 014484 319 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQA 394 (423)
Q Consensus 319 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g 394 (423)
..+...|..++..|++++|+..+++|++++| +..+|..+|.++...|++++|++.+++|+.++|....-++..+
T Consensus 278 ~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~--s~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~t~~~~~~ 351 (372)
T 3ly7_A 278 IIYQIKAVSALVKGKTDESYQAINTGIDLEM--SWLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGANTLYWIEN 351 (372)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcChHHHHhC
Confidence 3444566677778999999999999999996 4778899999999999999999999999999999875444433
|
| >1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3 | Back alignment and structure |
|---|
Probab=97.57 E-value=8.6e-05 Score=70.74 Aligned_cols=79 Identities=14% Similarity=0.040 Sum_probs=60.0
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHh
Q 014484 320 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFS 399 (423)
Q Consensus 320 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~ 399 (423)
.+...|+.++..|+|++|..+|+++ + .|..+|.|+.++|+|++|++.+++| +++..|...+.++..
T Consensus 124 a~~~IGd~~~~~g~yeeA~~~Y~~a----~-----n~~~LA~~L~~Lg~yq~AVea~~KA-----~~~~~Wk~v~~aCv~ 189 (449)
T 1b89_A 124 HIQQVGDRCYDEKMYDAAKLLYNNV----S-----NFGRLASTLVHLGEYQAAVDGARKA-----NSTRTWKEVCFACVD 189 (449)
T ss_dssp -------------CTTTHHHHHHHT----T-----CHHHHHHHHHTTTCHHHHHHHHHHH-----TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHh----h-----hHHHHHHHHHHhccHHHHHHHHHHc-----CCchhHHHHHHHHHH
Confidence 7788999999999999999999988 3 4899999999999999999999999 578999999999999
Q ss_pred CCChHHHHHHHHH
Q 014484 400 LGMENDARETLKD 412 (423)
Q Consensus 400 ~~~~~~A~~~~~~ 412 (423)
.|+++.|..+..+
T Consensus 190 ~~ef~lA~~~~l~ 202 (449)
T 1b89_A 190 GKEFRLAQMCGLH 202 (449)
T ss_dssp TTCHHHHHHTTTT
T ss_pred cCcHHHHHHHHHH
Confidence 9999999766543
|
| >3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* | Back alignment and structure |
|---|
Probab=97.54 E-value=9.7e-05 Score=71.06 Aligned_cols=81 Identities=11% Similarity=-0.008 Sum_probs=64.9
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcC--------CCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhc-----CC
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDG--------GTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVV-----SP 384 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~--------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l-----~p 384 (423)
+..+...|..+..+|+|++|+.+|.+++++ .|. -...++|+|.+|..+|++++|+..+++|+++ -|
T Consensus 329 ~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~-~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~ 407 (429)
T 3qwp_A 329 LKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPV-RGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGR 407 (429)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCT
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCC
Confidence 446677899999999999999999999964 333 4578999999999999999999999999865 45
Q ss_pred Cch---HHHHHHHHHHHh
Q 014484 385 DWP---TALYLQAACLFS 399 (423)
Q Consensus 385 ~~~---~a~~~~g~~~~~ 399 (423)
+++ +.+.+++.+...
T Consensus 408 ~Hp~~~~~~~~l~~~~~e 425 (429)
T 3qwp_A 408 EHSLIEDLILLLEECDAN 425 (429)
T ss_dssp TSHHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHH
Confidence 554 455666666544
|
| >3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00014 Score=70.01 Aligned_cols=70 Identities=10% Similarity=0.061 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcC--------CCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhc-----CC
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDG--------GTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVV-----SP 384 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~--------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l-----~p 384 (423)
+..+...|..+..+|+|++|+.+|++++++ .|+ -+..++|+|.+|..+|+|++|+..+++|+++ -|
T Consensus 340 a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~-~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG~ 418 (433)
T 3qww_A 340 LHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLN-VASMWLKLGRLYMGLENKAAGEKALKKAIAIMEVAHGK 418 (433)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCT
T ss_pred HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChH-HHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHcCC
Confidence 446678899999999999999999999964 344 5678999999999999999999999999865 56
Q ss_pred CchH
Q 014484 385 DWPT 388 (423)
Q Consensus 385 ~~~~ 388 (423)
+++.
T Consensus 419 ~Hp~ 422 (433)
T 3qww_A 419 DHPY 422 (433)
T ss_dssp TCHH
T ss_pred CChH
Confidence 6654
|
| >2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00031 Score=66.89 Aligned_cols=67 Identities=13% Similarity=-0.014 Sum_probs=40.5
Q ss_pred CCCCccceeee--ecceeeeeecCCCh--------hhHHHHHHHHHHHhcCCC--C-CccceEeEEEeCCceeEEEecCC
Q 014484 2 GGRCSKFSICW--FHCHLKSSVLESSD--------LGETLNLEEAKAVGNLRS--E-RLANLIGCCYEADERLLVAEFMP 68 (423)
Q Consensus 2 G~~g~v~~~~~--~~~~~~~~~~~~~~--------~~~~~~~~E~~~l~~l~h--~-niv~~~~~~~~~~~~~lv~e~~~ 68 (423)
|+++.||++.. .+..+.+|...... .....+..|.+++..+.. + .+++++.+ +.+..++|||+++
T Consensus 41 G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~lvmE~l~ 118 (397)
T 2olc_A 41 GNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTVMEDLS 118 (397)
T ss_dssp SSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEEECCCT
T ss_pred CceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEEEEEeCC
Confidence 55678888754 24556665433211 123456789999888732 3 45566654 3455689999998
Q ss_pred CC
Q 014484 69 NE 70 (423)
Q Consensus 69 ~~ 70 (423)
|.
T Consensus 119 g~ 120 (397)
T 2olc_A 119 HL 120 (397)
T ss_dssp TS
T ss_pred Cc
Confidence 74
|
| >1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00057 Score=52.86 Aligned_cols=77 Identities=10% Similarity=-0.077 Sum_probs=63.6
Q ss_pred HHHHHHHHHhcCCHHH---HHHHHHHHhcCC-CCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHH
Q 014484 321 SKKHGDTAFRAKDFST---AIDCYTQFIDGG-TMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 396 (423)
Q Consensus 321 ~~~~g~~~~~~~~~~~---A~~~~~~ai~~~-p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~ 396 (423)
.++.|-.+....+..+ +|.+++..+..+ |......++.+|..++++|+|.+|..+++..++.+|+|..|.--+..+
T Consensus 38 ~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~Lk~~i 117 (126)
T 1nzn_A 38 QFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLI 117 (126)
T ss_dssp HHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 3455666666666555 999999999887 633789999999999999999999999999999999999987766554
Q ss_pred H
Q 014484 397 L 397 (423)
Q Consensus 397 ~ 397 (423)
-
T Consensus 118 ~ 118 (126)
T 1nzn_A 118 D 118 (126)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT} | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00066 Score=62.21 Aligned_cols=69 Identities=16% Similarity=0.043 Sum_probs=49.6
Q ss_pred CCCCccceeeeecceeeeeecCCChhhHHHHHHHHHHHhcCC---CCCccceEeEEEeCCceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNLR---SERLANLIGCCYEADERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e~~~~~~L 72 (423)
|.+..+|.....+..+.+|+.... ....+..|...|+.|. ...+++++.++...+..++|||+++|.++
T Consensus 47 G~~n~~y~v~~~~~~~vlK~~~~~--~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~~ 118 (312)
T 3jr1_A 47 GEMNEIWLINDEVQTVFVKINERS--YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKN 118 (312)
T ss_dssp SSSSEEEEEESSSCEEEEEEEEGG--GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCCC
T ss_pred ccceeeeEEEECCCeEEEEeCCcc--cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCCC
Confidence 344556666544555555554332 3567889999999883 35689999999888889999999999764
|
| >1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00095 Score=52.49 Aligned_cols=69 Identities=9% Similarity=-0.018 Sum_probs=33.7
Q ss_pred cHHHHhhHHHHHHhcCCh---HHHHHHHHHhHhcCC-CchHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 014484 352 SPTVYARRCLSYLMNDMP---QEALGDAMQAQVVSP-DWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~---~~A~~~~~~a~~l~p-~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
.....++.|.|+.+..+. .+++..++..+.-+| +.-+.+|.+|.+++++|+|++|++..+..|+.+|.+
T Consensus 38 s~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n 110 (144)
T 1y8m_A 38 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNN 110 (144)
T ss_dssp CHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCC
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCc
Confidence 344444555555444332 234555555554444 334455555555555555555555555555555543
|
| >3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00057 Score=53.05 Aligned_cols=62 Identities=5% Similarity=-0.189 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHH
Q 014484 334 FSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAA 395 (423)
Q Consensus 334 ~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~ 395 (423)
..++|..++..++.+|....+.++.+|..+.++|+|.+|.++++..++.+|+|..|.--+..
T Consensus 59 ~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk~~ 120 (134)
T 3o48_A 59 ERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSM 120 (134)
T ss_dssp HHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHHHH
Confidence 34566666666665553245566666666666666666666666666666666655444433
|
| >3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A | Back alignment and structure |
|---|
Probab=97.19 E-value=0.00077 Score=52.30 Aligned_cols=83 Identities=8% Similarity=-0.044 Sum_probs=67.9
Q ss_pred HHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCCh---HHHHHHHHHhHhcCC-CchHHHHHHHHHHHhCCChHHHHHHHHH
Q 014484 337 AIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMP---QEALGDAMQAQVVSP-DWPTALYLQAACLFSLGMENDARETLKD 412 (423)
Q Consensus 337 A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~---~~A~~~~~~a~~l~p-~~~~a~~~~g~~~~~~~~~~~A~~~~~~ 412 (423)
..+-|.+=+ .+......-++.|.|+.+..+. .+++..++..++.+| ..-+.+|.+|.+++++|+|++|++..+.
T Consensus 26 l~~qy~~E~--~~~vs~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~ 103 (134)
T 3o48_A 26 LRQQVVSEG--GPTATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDT 103 (134)
T ss_dssp HHHHHHHTT--GGGSCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHh--CCCCChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 344454433 2333678889999999887664 579999999999998 5688999999999999999999999999
Q ss_pred hhccccccC
Q 014484 413 GTNLEAKKN 421 (423)
Q Consensus 413 al~l~~~~~ 421 (423)
.|+++|.+.
T Consensus 104 lL~~eP~N~ 112 (134)
T 3o48_A 104 LFEHERNNK 112 (134)
T ss_dssp HHTTCTTCH
T ss_pred HHhhCCCCH
Confidence 999999864
|
| >1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0015 Score=51.28 Aligned_cols=75 Identities=5% Similarity=-0.163 Sum_probs=61.1
Q ss_pred HHHHHHHhcC---CHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHH
Q 014484 323 KHGDTAFRAK---DFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 397 (423)
Q Consensus 323 ~~g~~~~~~~---~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 397 (423)
+.|-.+.+.. +-.++|.+++..+..+|....+.++.+|..++++|+|.+|.++++..++.+|+|..|.--+..+-
T Consensus 44 ~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk~~Ie 121 (144)
T 1y8m_A 44 NYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSMVE 121 (144)
T ss_dssp HHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 3444454443 34679999999999888647789999999999999999999999999999999988876655443
|
| >2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.14 E-value=0.0022 Score=61.52 Aligned_cols=31 Identities=10% Similarity=0.159 Sum_probs=26.6
Q ss_pred HcCCCeeeccCCCCCeeecCCCCeEEccccccc
Q 014484 104 SSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK 136 (423)
Q Consensus 104 H~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~ 136 (423)
+... ++|||++|.||+++.++ +.|+||+.+.
T Consensus 230 ~~~~-liHGDl~~~Nil~~~~~-~~lID~e~a~ 260 (420)
T 2pyw_A 230 RAQA-LIHGDLHTGSVMVTQDS-TQVIDPEFSF 260 (420)
T ss_dssp BCCE-EECSCCSGGGEEECSSC-EEECCCTTCE
T ss_pred CCCe-EEecCCCCCcEEEeCCC-CEEEeCcccc
Confidence 3456 99999999999998776 9999998764
|
| >2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A* | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0064 Score=57.50 Aligned_cols=97 Identities=9% Similarity=-0.016 Sum_probs=81.0
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCC-------c--------------HHHHhhHHHHHHhcCChHHHHHHH
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMV-------S--------------PTVYARRCLSYLMNDMPQEALGDA 376 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-------~--------------~~~~~~~~~~~~~~~~~~~A~~~~ 376 (423)
...+...|......|+.++|+..+.+|+.+-... . ..+...++.++...|++.+|+..+
T Consensus 115 f~~l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l 194 (388)
T 2ff4_A 115 FVAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAEL 194 (388)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
Confidence 3455667777778899999999999999874220 0 134456777888999999999999
Q ss_pred HHhHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHhh
Q 014484 377 MQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGT 414 (423)
Q Consensus 377 ~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al 414 (423)
.+++..+|-+-.+|..+-.+|+..|+..+|++.|+++-
T Consensus 195 ~~~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r 232 (388)
T 2ff4_A 195 EALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVK 232 (388)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998864
|
| >3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0026 Score=57.94 Aligned_cols=27 Identities=15% Similarity=0.038 Sum_probs=23.2
Q ss_pred eeeccCCCCCeeecCCCCeEEccccccc
Q 014484 109 ALYHDLNAYRILFDKDGNPRLSSFGLMK 136 (423)
Q Consensus 109 iiH~dlkp~Nill~~~~~~kl~Dfg~~~ 136 (423)
++|+|+.|.||+ ..++.+.++||..+.
T Consensus 175 l~HgDl~~~Nil-~~~~~~~lID~e~a~ 201 (301)
T 3dxq_A 175 ACHCDPLCENFL-DTGERMWIVDWEYSG 201 (301)
T ss_dssp EECSCCCGGGEE-ECSSCEEECCCTTCE
T ss_pred eeccCCCcCCEE-ECCCCEEEEeccccc
Confidence 899999999999 556778999998654
|
| >3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP} | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0024 Score=59.03 Aligned_cols=29 Identities=17% Similarity=0.178 Sum_probs=25.3
Q ss_pred eeeccCCCCCeeecCC----CCeEEcccccccc
Q 014484 109 ALYHDLNAYRILFDKD----GNPRLSSFGLMKN 137 (423)
Q Consensus 109 iiH~dlkp~Nill~~~----~~~kl~Dfg~~~~ 137 (423)
++|||+.+.||+++.+ +.+.|+||+.+..
T Consensus 185 lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 185 FVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp EECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred eEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 9999999999999874 6789999997654
|
| >3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.71 E-value=0.0091 Score=48.29 Aligned_cols=112 Identities=14% Similarity=0.086 Sum_probs=74.1
Q ss_pred hHHHHHHhhcCccCCcchhhh-hhhh----hhhhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCC---CC------
Q 014484 285 TAIHEILEGMGYKDDEGIANE-LSFQ----MWTSQMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGG---TM------ 350 (423)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~---p~------ 350 (423)
+++.+.++..-|.+....+.. .+.. .......++..+.-.|+.+|..|+|..|+..|++||+.. +.
T Consensus 25 dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~ 104 (167)
T 3ffl_A 25 DHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRP 104 (167)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--------
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccc
Confidence 455555555555554433332 1111 122334556677788999999999999999999997431 11
Q ss_pred ---------------CcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHH
Q 014484 351 ---------------VSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 397 (423)
Q Consensus 351 ---------------~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 397 (423)
.+.++.+..+.||.+++++++|+...+..-.. -..++....+|..|
T Consensus 105 ~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~Ip~k-~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 105 STGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDGIPSR-QRTPKINMLLANLY 165 (167)
T ss_dssp ------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHTSCGG-GCCHHHHHHHHHHC
T ss_pred cccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhcCCch-hcCHHHHHHHHHHh
Confidence 02378899999999999999999998764322 24566666666654
|
| >4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0052 Score=62.45 Aligned_cols=82 Identities=7% Similarity=-0.053 Sum_probs=76.7
Q ss_pred HHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHH-HHHHHhHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHH
Q 014484 334 FSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEAL-GDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKD 412 (423)
Q Consensus 334 ~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~-~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~ 412 (423)
.+.....|++||...|. ++.+|...+..+...|+.++|. ..+++|+...|.+...|+..+......|++++|.+.|++
T Consensus 325 ~~Rv~~~Ye~aL~~~p~-~~~lW~~ya~~~~~~~~~~~a~r~il~rAi~~~P~s~~Lwl~~a~~ee~~~~~e~aR~iyek 403 (679)
T 4e6h_A 325 KARMTYVYMQAAQHVCF-APEIWFNMANYQGEKNTDSTVITKYLKLGQQCIPNSAVLAFSLSEQYELNTKIPEIETTILS 403 (679)
T ss_dssp HHHHHHHHHHHHHHTTT-CHHHHHHHHHHHHHHSCCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCC-CHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 34567899999999999 9999999999999999999997 999999999999999999999999999999999999999
Q ss_pred hhcc
Q 014484 413 GTNL 416 (423)
Q Consensus 413 al~l 416 (423)
+++.
T Consensus 404 ~l~~ 407 (679)
T 4e6h_A 404 CIDR 407 (679)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9974
|
| >4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0098 Score=60.42 Aligned_cols=99 Identities=8% Similarity=-0.027 Sum_probs=76.8
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcC-ChHHHHHHHHHhHhcCCCchHHHHHHHHHHH
Q 014484 320 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMND-MPQEALGDAMQAQVVSPDWPTALYLQAACLF 398 (423)
Q Consensus 320 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~-~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~ 398 (423)
.+...+....+.|+.+.|...|.+|++..|.....+|...|..-.+.+ +++.|...|+++++..|+++..|...+....
T Consensus 436 vWi~y~~~erR~~~l~~AR~vf~~A~~~~~~~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~fe~ 515 (679)
T 4e6h_A 436 VYCVYMNTMKRIQGLAASRKIFGKCRRLKKLVTPDIYLENAYIEYHISKDTKTACKVLELGLKYFATDGEYINKYLDFLI 515 (679)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHTGGGSCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCchHHHHHHHHHHH
Confidence 455555666677888899999999988733215667776666666654 4889999999999999988888888888888
Q ss_pred hCCChHHHHHHHHHhhcccc
Q 014484 399 SLGMENDARETLKDGTNLEA 418 (423)
Q Consensus 399 ~~~~~~~A~~~~~~al~l~~ 418 (423)
..|+.+.|...|++|++..+
T Consensus 516 ~~~~~~~AR~lferal~~~~ 535 (679)
T 4e6h_A 516 YVNEESQVKSLFESSIDKIS 535 (679)
T ss_dssp HHTCHHHHHHHHHHHTTTSS
T ss_pred hCCCHHHHHHHHHHHHHhcC
Confidence 88999999999999988766
|
| >3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A* | Back alignment and structure |
|---|
Probab=96.47 E-value=0.005 Score=57.95 Aligned_cols=103 Identities=17% Similarity=0.104 Sum_probs=64.5
Q ss_pred HHHHHHHHHHHhcCC-CCCccceEeEEEeCCceeEEEecCCCCCHHhh-h-------------c--cCC----CCCC--C
Q 014484 29 ETLNLEEAKAVGNLR-SERLANLIGCCYEADERLLVAEFMPNETLAKH-L-------------F--HWE----TQPM--K 85 (423)
Q Consensus 29 ~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~-i-------------~--~~~----~~~~--~ 85 (423)
...+.+|.++++.|. +.-.+++++.+.+ .+||||++|.+|..- + . +.. ++.. -
T Consensus 97 ~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l 172 (379)
T 3feg_A 97 VDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWL 172 (379)
T ss_dssp HHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccH
Confidence 455668999998883 3334677776653 399999998665321 0 0 000 1112 2
Q ss_pred HHHHHHHHHHHHH-------------------HHHHHH----cC----CCeeeccCCCCCeeecCC----CCeEEccccc
Q 014484 86 WAMRLRVALYLAQ-------------------ALEYCS----SK----GRALYHDLNAYRILFDKD----GNPRLSSFGL 134 (423)
Q Consensus 86 ~~~~~~i~~qi~~-------------------~l~~lH----~~----~~iiH~dlkp~Nill~~~----~~~kl~Dfg~ 134 (423)
+.++.++..++-. .+..|. .. . ++|+|+.+.||+++.+ +.+.++||..
T Consensus 173 ~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~L~~~~~~~~-~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~ 251 (379)
T 3feg_A 173 FGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRKLLESTPSPVV-FCHNDIQEGNILLLSEPENADSLMLVDFEY 251 (379)
T ss_dssp HHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHHHHHHTSCCCEE-EECSCCCGGGEEEESCC---CCEEECCCTT
T ss_pred HHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHHHHHhhcCCCcE-EEcCCCCCCeEEEcCCCCccCcEEEEeccc
Confidence 4566666655422 123332 21 3 8999999999999876 6899999986
Q ss_pred cc
Q 014484 135 MK 136 (423)
Q Consensus 135 ~~ 136 (423)
+.
T Consensus 252 a~ 253 (379)
T 3feg_A 252 SS 253 (379)
T ss_dssp CE
T ss_pred CC
Confidence 53
|
| >4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.40 E-value=0.0059 Score=62.21 Aligned_cols=59 Identities=15% Similarity=0.019 Sum_probs=53.0
Q ss_pred HHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHh
Q 014484 355 VYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDG 413 (423)
Q Consensus 355 ~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a 413 (423)
.+..-+..+...|+|+-|+..+++|+...|+....|+.++.+|..+|+|+.|+-.++.+
T Consensus 339 LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 339 LLNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 44445666677899999999999999999999999999999999999999999998876
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 423 | ||||
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 5e-33 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 8e-33 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 1e-32 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 5e-32 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 1e-30 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 4e-30 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 4e-29 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 9e-29 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 9e-29 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 2e-28 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 4e-28 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 1e-27 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 2e-27 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 4e-27 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 1e-26 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 1e-26 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 3e-26 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 3e-26 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 6e-26 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 9e-26 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 1e-25 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 2e-25 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 3e-25 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 4e-25 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 6e-25 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 8e-25 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 1e-24 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 3e-24 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 1e-23 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 2e-23 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 9e-23 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 1e-22 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 3e-22 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 6e-22 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 7e-22 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 8e-22 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 4e-21 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 5e-21 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 8e-21 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 5e-20 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 1e-19 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 2e-19 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 8e-19 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 2e-18 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 2e-17 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 3e-17 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 8e-17 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 2e-15 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 3e-15 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 4e-15 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 4e-15 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 5e-15 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 7e-15 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 7e-15 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 7e-14 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 2e-13 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 4e-13 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 9e-13 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 3e-09 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 4e-09 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 4e-09 | |
| d2c2la1 | 201 | a.118.8.1 (A:24-224) STIP1 homology and U box-cont | 2e-05 |
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 123 bits (310), Expect = 5e-33
Identities = 45/228 (19%), Positives = 94/228 (41%), Gaps = 10/228 (4%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EA + ++ L L+G C ++ EFM L +L Q + + L +
Sbjct: 61 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYM 120
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYST-----N 147
A ++ A+EY K ++ DL A L ++ +++ FGL + +
Sbjct: 121 ATQISSAMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 179
Query: 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEG 207
+ +T PE + + + +S V++FG +L ++ + P +DL L++
Sbjct: 180 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM-SPYPGIDL---SQVYELLEKDYRM 235
Query: 208 HFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEVPSYV 255
++ L C Q +RP+ + + ++ +E+ + V
Sbjct: 236 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEV 283
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 122 bits (307), Expect = 8e-33
Identities = 51/228 (22%), Positives = 102/228 (44%), Gaps = 11/228 (4%)
Query: 21 VLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80
+++ + E +EEAK + NL E+L L G C + ++ E+M N L +L
Sbjct: 35 MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL-REM 93
Query: 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD 140
+ L + + +A+EY SK L+ DL A L + G ++S FGL + D
Sbjct: 94 RHRFQTQQLLEMCKDVCEAMEYLESKQF-LHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 152
Query: 141 GKSYSTN-----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSK 195
+ S+ + ++PPE + + + +S +++FG ++ ++ S +P +
Sbjct: 153 DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER----FTNS 208
Query: 196 NFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243
+ L + + ++ + C +A ERP K L+ +++
Sbjct: 209 ETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNIL 256
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 122 bits (306), Expect = 1e-32
Identities = 45/232 (19%), Positives = 93/232 (40%), Gaps = 11/232 (4%)
Query: 21 VLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80
+ + E +EEA+ + L +L L G C E LV EFM + L+ + +
Sbjct: 36 TIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY-LRTQ 94
Query: 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD 140
L + L + + + Y ++ DL A L ++ ++S FG+ + D
Sbjct: 95 RGLFAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD 153
Query: 141 GKSYSTN-----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSK 195
+ S+ + + PE R + +S V+SFG ++ ++ S IP + +
Sbjct: 154 DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN----RSNS 209
Query: 196 NFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQK 247
+ + + + T + ++ + C + +RP L+ L + +
Sbjct: 210 EVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAE 261
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 120 bits (302), Expect = 5e-32
Identities = 51/217 (23%), Positives = 93/217 (42%), Gaps = 7/217 (3%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERL-LVAEFMPNETLAKHLFHWETQPMKWAMRLR 91
L EA + LR L L+G E L +V E+M +L +L + L+
Sbjct: 48 LAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLK 107
Query: 92 VALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKN-SRDGKSYSTNLAF 150
+L + +A+EY ++ DL A +L +D ++S FGL K S + + +
Sbjct: 108 FSLDVCEAMEYLEGNNF-VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKW 166
Query: 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFS 210
T PE +R + + +S V+SFG +L ++ S +P I K+ + ++ +
Sbjct: 167 TAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPR----IPLKDVVPRVEKGYKMDAP 222
Query: 211 NDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQK 247
+ + + C +A RP+ L L ++
Sbjct: 223 DGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 259
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 116 bits (293), Expect = 1e-30
Identities = 47/229 (20%), Positives = 95/229 (41%), Gaps = 20/229 (8%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
E + R + +G + +V ++ +L HL ET + + +
Sbjct: 52 KNEVGVLRKTRHVNILLFMGYSTA-PQLAIVTQWCEGSSLYHHLHIIET-KFEMIKLIDI 109
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL--MKNSRDGKSYSTNLAF 150
A AQ ++Y +K ++ DL + I +D ++ FGL +K+ G L+
Sbjct: 110 ARQTAQGMDYLHAKSI-IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG 168
Query: 151 TP----PEYMRT---GRVTPESVVYSFGTMLLDLLSGK----HIPPSHALDLIRSKNFLL 199
+ PE +R + +S VY+FG +L +L++G+ +I + + + +L
Sbjct: 169 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS 228
Query: 200 LMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248
S + + + RL + CL+ + ERP ++ S+ L +
Sbjct: 229 PDLSKVRSNCPK----AMKRLMAECLKKKRDERPLFPQILASIELLARS 273
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 115 bits (289), Expect = 4e-30
Identities = 53/239 (22%), Positives = 97/239 (40%), Gaps = 12/239 (5%)
Query: 21 VLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80
L+ + L+EA+ + LR E+L L + +V E+M +L L
Sbjct: 48 TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGET 106
Query: 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD 140
+ ++ + +A +A + Y ++ DL A IL ++ +++ FGL + D
Sbjct: 107 GKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRAANILVGENLVCKVADFGLARLIED 165
Query: 141 GKSYSTN-----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSK 195
+ + + +T PE GR T +S V+SFG +L +L + +P ++ +
Sbjct: 166 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN----R 221
Query: 196 NFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEVPSY 254
L ++ + L L +C + E ERP + L L E P Y
Sbjct: 222 EVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE-PQY 279
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 112 bits (282), Expect = 4e-29
Identities = 46/227 (20%), Positives = 93/227 (40%), Gaps = 11/227 (4%)
Query: 21 VLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80
L+ + L EA + L+ +RL L + + ++ E+M N +L L
Sbjct: 44 SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPS 102
Query: 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD 140
+ L +A +A+ + + + ++ DL A IL + +++ FGL + D
Sbjct: 103 GIKLTINKLLDMAAQIAEGMAFIEERNY-IHRDLRAANILVSDTLSCKIADFGLARLIED 161
Query: 141 GKSYSTN-----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSK 195
+ + + +T PE + G T +S V+SFG +L ++++ IP + +
Sbjct: 162 NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG----MTNP 217
Query: 196 NFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISL 242
+ ++ ++ EL +L C + +RP L L
Sbjct: 218 EVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVL 264
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 111 bits (279), Expect = 9e-29
Identities = 49/225 (21%), Positives = 86/225 (38%), Gaps = 12/225 (5%)
Query: 17 LKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76
L + LE + + L E + +LR + L G ++A L+ E+ P T+ + L
Sbjct: 39 LFKAQLEKAGVEHQL-RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 97
Query: 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK 136
LA AL YC SK ++ D+ +L G +++ FG
Sbjct: 98 QKL--SKFDEQRTATYITELANALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSV 154
Query: 137 NSRDGKSYSTN--LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRS 194
++ + + L + PPE + + ++S G + + L GK PP A
Sbjct: 155 HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK--PPFEANTYQE- 211
Query: 195 KNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239
S +E F + L SR L+ +RP + ++
Sbjct: 212 ---TYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 253
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 112 bits (280), Expect = 9e-29
Identities = 44/224 (19%), Positives = 92/224 (41%), Gaps = 15/224 (6%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L EA +G + +L G ++ +++ EFM N +L + +
Sbjct: 75 LSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSL-DSFLRQNDGQFTVIQLVGM 133
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN----- 147
+A ++Y + ++ DL A IL + + ++S FGL + D S T
Sbjct: 134 LRGIAAGMKYLADMNY-VHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALG 192
Query: 148 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 203
+ +T PE ++ + T S V+S+G ++ +++S P + +++ + ++
Sbjct: 193 GKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWD----MTNQDVINAIEQ 248
Query: 204 ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQK 247
D + L +L C Q + RP +V +L + +
Sbjct: 249 DYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIR 292
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 110 bits (276), Expect = 2e-28
Identities = 45/223 (20%), Positives = 77/223 (34%), Gaps = 25/223 (11%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLL--VAEFMPNETLAKHLFHW--ETQPMKWAM 88
+ E + L+ + + L V E+ LA + E Q +
Sbjct: 51 VSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEF 110
Query: 89 RLRVALYLAQALEYCSSKGRALYH----DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY 144
LRV L AL+ C + + DL + D N +L FGL + S+
Sbjct: 111 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSF 170
Query: 145 STNLAFTP----PEYMRTGRVTPESVVYSFGTMLLDLLSGKH----IPPSHALDLIRSKN 196
+ TP PE M +S ++S G +L +L + IR
Sbjct: 171 AKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK 230
Query: 197 FLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239
F + +S+ EL + +R L + RP+ + ++
Sbjct: 231 FR-----RIPYRYSD----ELNEIITRMLNLKDYHRPSVEEIL 264
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 110 bits (275), Expect = 4e-28
Identities = 46/233 (19%), Positives = 93/233 (39%), Gaps = 17/233 (7%)
Query: 17 LKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76
LK+ + + E L EA + L + + +IG C EA+ +LV E L K+L
Sbjct: 42 LKNEANDPALKDELLA--EANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL 98
Query: 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK 136
+ + +K + + ++ ++Y ++ DL A +L ++S FGL K
Sbjct: 99 --QQNRHVKDKNIIELVHQVSMGMKYLEESNF-VHRDLAARNVLLVTQHYAKISDFGLSK 155
Query: 137 NSRDGKSYSTN-------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHAL 189
R ++Y + + PE + + + +S V+SFG ++ + S P
Sbjct: 156 ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG-- 213
Query: 190 DLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISL 242
++ +++ E+ L + C + RP ++ + L
Sbjct: 214 --MKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL 264
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 109 bits (274), Expect = 1e-27
Identities = 44/246 (17%), Positives = 86/246 (34%), Gaps = 42/246 (17%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
+ E + + S + G Y E + E M +L + L + + + +V
Sbjct: 52 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKV 109
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYST--NLAF 150
++ + + L Y K + ++ D+ IL + G +L FG+ D + S ++
Sbjct: 110 SIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSY 169
Query: 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKH-IPPSHALDLIRSKNFLLLMDSALEGHF 209
PE ++ + +S ++S G L+++ G++ IPP A +L + D+A
Sbjct: 170 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPR 229
Query: 210 SNDEGT-------------------------------------ELVRLASRCLQSEARER 232
G E ++CL ER
Sbjct: 230 PRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAER 289
Query: 233 PNAKSL 238
+ K L
Sbjct: 290 ADLKQL 295
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 108 bits (272), Expect = 2e-27
Identities = 42/210 (20%), Positives = 70/210 (33%), Gaps = 10/210 (4%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
++E + + LR GC LV E+ H +P++ V
Sbjct: 63 IKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVH--KKPLQEVEIAAV 120
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP 152
Q L Y S ++ D+ A IL + G +L FG S+ +
Sbjct: 121 THGALQGLAYLHSHNM-IHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVGTPYWMA 179
Query: 153 PEY---MRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHF 209
PE M G+ + V+S G ++L K + + GH+
Sbjct: 180 PEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHW 239
Query: 210 SNDEGTELVRLASRCLQSEARERPNAKSLV 239
S CLQ ++RP ++ L+
Sbjct: 240 SE----YFRNFVDSCLQKIPQDRPTSEVLL 265
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 107 bits (269), Expect = 4e-27
Identities = 49/234 (20%), Positives = 103/234 (44%), Gaps = 15/234 (6%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADER-LLVAEFMPNETLAKHLFHWETQPMKWAMRLR 91
L E + + + +L+G C ++ L+V +M + L ++ ET +
Sbjct: 76 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIG 134
Query: 92 VALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN---- 147
L +A+ +++ +SK ++ DL A + D+ +++ FGL ++ D + S +
Sbjct: 135 FGLQVAKGMKFLASKKF-VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTG 193
Query: 148 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 203
+ + E ++T + T +S V+SFG +L +L++ PP ++ +LL
Sbjct: 194 AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFDITVYLLQGRR 252
Query: 204 ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEVPSYVLL 257
L+ + D L + +C +A RP+ LV + ++ YV +
Sbjct: 253 LLQPEYCPD---PLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVHV 303
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 106 bits (266), Expect = 1e-26
Identities = 44/245 (17%), Positives = 89/245 (36%), Gaps = 29/245 (11%)
Query: 17 LKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76
+K+ +S L EA + + L+G + L++ E M L +L
Sbjct: 55 IKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 114
Query: 77 FHW--------ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPR 128
P + +++A +A + Y ++ ++ DL A + +D +
Sbjct: 115 RSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKF-VHRDLAARNCMVAEDFTVK 173
Query: 129 LSSFGLMKNSRDGKSYSTN------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKH 182
+ FG+ ++ + Y + + PE ++ G T S V+SFG +L ++ +
Sbjct: 174 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 233
Query: 183 IP-----PSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKS 237
P L + L D+ + L L C Q + RP+
Sbjct: 234 QPYQGLSNEQVLRFVMEGGLLDKPDNCPD---------MLFELMRMCWQYNPKMRPSFLE 284
Query: 238 LVISL 242
++ S+
Sbjct: 285 IISSI 289
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 105 bits (264), Expect = 1e-26
Identities = 48/233 (20%), Positives = 91/233 (39%), Gaps = 18/233 (7%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
+ EA+ + L + + LIG C +A+ +LV E L K L + + + +
Sbjct: 57 MREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKR-EEIPVSNVAEL 114
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN----- 147
++ ++Y K ++ DL A +L ++S FGL K SY T
Sbjct: 115 LHQVSMGMKYLEEKNF-VHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGK 173
Query: 148 --LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSAL 205
L + PE + + + S V+S+G + + LS P ++ + ++
Sbjct: 174 WPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKK----MKGPEVMAFIEQGK 229
Query: 206 EGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISL----MSLQKEAEVPSY 254
+ EL L S C + +RP+ ++ + SL + E +
Sbjct: 230 RMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKVEGHHH 282
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 105 bits (263), Expect = 3e-26
Identities = 37/224 (16%), Positives = 88/224 (39%), Gaps = 13/224 (5%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EA + ++ + + L+G C + +L+ + MP L + + L
Sbjct: 59 LDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDY-VREHKDNIGSQYLLNW 116
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN----- 147
+ +A+ + Y + ++ DL A +L + +++ FGL K +
Sbjct: 117 CVQIAKGMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 175
Query: 148 -LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALE 206
+ + E + T +S V+S+G + +L++ P D I + +++
Sbjct: 176 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY----DGIPASEISSILEKGER 231
Query: 207 GHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAE 250
++ + +C +A RP + L+I + ++ +
Sbjct: 232 LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQ 275
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 105 bits (263), Expect = 3e-26
Identities = 48/239 (20%), Positives = 89/239 (37%), Gaps = 34/239 (14%)
Query: 33 LEEAKAVGNLRS-ERLANLIGCCYEADERLLVAEFMPNETLAKHLF-------------- 77
+ E K + L S E + NL+G C + L+ E+ L +L
Sbjct: 88 MSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYE 147
Query: 78 -------HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRL 129
+ + + L A +A+ +E+ K H DL A +L ++
Sbjct: 148 NQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS--CVHRDLAARNVLVTHGKVVKI 205
Query: 130 SSFGLMKNSRDGKSYSTN------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHI 183
FGL ++ +Y + + PE + G T +S V+S+G +L ++ S
Sbjct: 206 CDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVN 265
Query: 184 PPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISL 242
P + NF L+ + + E+ + C ++R+RP+ +L L
Sbjct: 266 PYP---GIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFL 321
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 104 bits (260), Expect = 6e-26
Identities = 36/272 (13%), Positives = 83/272 (30%), Gaps = 44/272 (16%)
Query: 21 VLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEAD----ERLLVAEFMPNETLAKHL 76
+ S + E LR E + I + + + LV+++ + +L +L
Sbjct: 33 IFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL 92
Query: 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYH-------DLNAYRILFDKDGNPRL 129
+ +++AL A L + + DL + IL K+G +
Sbjct: 93 NR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCI 149
Query: 130 SSFGLMKNSRDGKSY----STNLAFTP----PEYMRT------GRVTPESVVYSFGTMLL 175
+ GL + T PE + + +Y+ G +
Sbjct: 150 ADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFW 209
Query: 176 DLLSGKHIPPSH---------------ALDLIRSKNFLLLMDSALEGHFSNDEGT-ELVR 219
++ I H +++ +R + + + + E + +
Sbjct: 210 EIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAK 269
Query: 220 LASRCLQSEARERPNAKSLVISLMSLQKEAEV 251
+ C + R A + +L L ++ +
Sbjct: 270 IMRECWYANGAARLTALRIKKTLSQLSQQEGI 301
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 104 bits (259), Expect = 9e-26
Identities = 48/248 (19%), Positives = 88/248 (35%), Gaps = 43/248 (17%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW------------- 79
EA + + + L+G C L+ E+M L + L
Sbjct: 64 QREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDL 123
Query: 80 ---------ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLS 130
P+ A +L +A +A + Y S + ++ DL L ++ +++
Sbjct: 124 STRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKF-VHRDLATRNCLVGENMVVKIA 182
Query: 131 SFGLMKNSRDGKSYSTN------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
FGL +N Y + + + PPE + R T ES V+++G +L ++ S P
Sbjct: 183 DFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQP 242
Query: 185 -----PSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239
+ +R N L ++ EL L C +RP+ S+
Sbjct: 243 YYGMAHEEVIYYVRDGNILACPENCPL---------ELYNLMRLCWSKLPADRPSFCSIH 293
Query: 240 ISLMSLQK 247
L + +
Sbjct: 294 RILQRMCE 301
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 103 bits (257), Expect = 1e-25
Identities = 42/241 (17%), Positives = 91/241 (37%), Gaps = 13/241 (5%)
Query: 17 LKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76
+K+ ++ L EA +G + L G + +++ E+M N
Sbjct: 41 IKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGA-LDKF 99
Query: 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK 136
+ + + +A ++Y ++ + DL A IL + + ++S FGL +
Sbjct: 100 LREKDGEFSVLQLVGMLRGIAAGMKYLANMNYV-HRDLAARNILVNSNLVCKVSDFGLSR 158
Query: 137 NSRDGKSYSTN-------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHAL 189
D + + +T PE + + T S V+SFG ++ ++++ P
Sbjct: 159 VLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWE-- 216
Query: 190 DLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEA 249
+ + + ++ D + + +L +C Q E RP +V L L +
Sbjct: 217 --LSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAP 274
Query: 250 E 250
+
Sbjct: 275 D 275
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 102 bits (256), Expect = 2e-25
Identities = 39/215 (18%), Positives = 80/215 (37%), Gaps = 14/215 (6%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADER----LLVAEFMPNETLAKHLFHWETQPMKWAM 88
EEA+ + L+ + + +LV E M + TL +L + MK +
Sbjct: 56 KEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLK--RFKVMKIKV 113
Query: 89 RLRVALYLAQALEYCSSKGRALYH-DLNAYRILF-DKDGNPRLSSFGLMKNSRDGKSYST 146
+ + L++ ++ + H DL I G+ ++ GL R + +
Sbjct: 114 LRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAV 173
Query: 147 --NLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSA 204
F PE + VY+FG +L++ + ++ P S + ++ + +
Sbjct: 174 IGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEY-PYSECQN--AAQIYRRVTSGV 229
Query: 205 LEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239
F E+ + C++ ER + K L+
Sbjct: 230 KPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLL 264
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 102 bits (256), Expect = 3e-25
Identities = 45/239 (18%), Positives = 84/239 (35%), Gaps = 27/239 (11%)
Query: 33 LEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW------------ 79
+ E K + L + NL+G C L++ E+ L L
Sbjct: 74 MSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPA 133
Query: 80 ----ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLM 135
+ + L + +A+ + + +SK ++ DL A IL ++ FGL
Sbjct: 134 IMEDDELALDLEDLLSFSYQVAKGMAFLASKNC-IHRDLAARNILLTHGRITKICDFGLA 192
Query: 136 KNSRDGKSY-STNLAFTPPEYM-----RTGRVTPESVVYSFGTMLLDLLSGKHIPPSHAL 189
++ ++ +Y A P ++M T ES V+S+G L +L S P
Sbjct: 193 RDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPG-- 250
Query: 190 DLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248
+ F ++ E+ + C ++ +RP K +V + E
Sbjct: 251 -MPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 308
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 102 bits (254), Expect = 4e-25
Identities = 43/236 (18%), Positives = 87/236 (36%), Gaps = 23/236 (9%)
Query: 33 LEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAKHL--------------F 77
E + + L + NL+G C L E+ P+ L L
Sbjct: 58 AGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIA 117
Query: 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKN 137
+ + L A +A+ ++Y S K ++ DL A IL ++ +++ FGL +
Sbjct: 118 NSTASTLSSQQLLHFAADVARGMDYLSQKQF-IHRDLAARNILVGENYVAKIADFGLSRG 176
Query: 138 SRDGKSYSTN---LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRS 194
+ + + E + T S V+S+G +L +++S P +
Sbjct: 177 QEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG----MTC 232
Query: 195 KNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAE 250
+ + E+ L +C + + ERP+ +++SL + +E +
Sbjct: 233 AELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 288
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 101 bits (253), Expect = 6e-25
Identities = 37/215 (17%), Positives = 73/215 (33%), Gaps = 14/215 (6%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
+ E + + + L+ Y + ++ EF + + E +P+ + V
Sbjct: 57 MVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE-RPLTESQIQVV 115
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYST----NL 148
AL Y ++ DL A ILF DG+ +L+ FG+ +
Sbjct: 116 CKQTLDALNYLHDNK-IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTP 174
Query: 149 AFTPPEYMRT-----GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 203
+ PE + ++ V+S G L+++ + PP H L+ +R +
Sbjct: 175 YWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIE--PPHHELNPMRVL-LKIAKSE 231
Query: 204 ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
+ + +CL+ R L
Sbjct: 232 PPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQL 266
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 101 bits (252), Expect = 8e-25
Identities = 44/210 (20%), Positives = 85/210 (40%), Gaps = 11/210 (5%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
+ E + ++ + N + DE +V E++ +L + M V
Sbjct: 65 INEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAV 121
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP 152
QALE+ S ++ D+ + IL DG+ +L+ FG +S + + TP
Sbjct: 122 CRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTP 180
Query: 153 ----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGH 208
PE + P+ ++S G M ++++ G+ PP + +R+ +L+ + E
Sbjct: 181 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE--PPYLNENPLRAL-YLIATNGTPELQ 237
Query: 209 FSNDEGTELVRLASRCLQSEARERPNAKSL 238
+RCL + +R +AK L
Sbjct: 238 NPEKLSAIFRDFLNRCLDMDVEKRGSAKEL 267
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 100 bits (249), Expect = 1e-24
Identities = 49/242 (20%), Positives = 87/242 (35%), Gaps = 22/242 (9%)
Query: 17 LKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76
+K+ +SD L+EA + + LIG E + ++ E L +
Sbjct: 40 IKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGEL-RSF 97
Query: 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK 136
+ A + A L+ AL Y SK ++ D+ A +L + +L FGL +
Sbjct: 98 LQVRKYSLDLASLILYAYQLSTALAYLESKRF-VHRDIAARNVLVSSNDCVKLGDFGLSR 156
Query: 137 NSRDGKSYSTNLAFTPPEYM-----RTGRVTPESVVYSFGTMLLDLLSGKHIP-----PS 186
D Y + P ++M R T S V+ FG + ++L P +
Sbjct: 157 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 216
Query: 187 HALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQ 246
+ I + L + + L L ++C + RP L L ++
Sbjct: 217 DVIGRIENGERLPMPPNCPP---------TLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 267
Query: 247 KE 248
+E
Sbjct: 268 EE 269
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 100 bits (250), Expect = 3e-24
Identities = 40/213 (18%), Positives = 75/213 (35%), Gaps = 13/213 (6%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
+E + + LR L NL + +E +++ EFM L + + E M +
Sbjct: 71 RKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVAD-EHNKMSEDEAVEY 129
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILF--DKDGNPRLSSFGLMKNSRDGKSYST---N 147
+ + L + ++ DL I+F + +L FGL + +S
Sbjct: 130 MRQVCKGLCHMHENN-YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGT 188
Query: 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKH-IPPSHALDLIRS-KNFLLLMDSAL 205
F PE V + ++S G + LLSG + + +R+ K+ MD +
Sbjct: 189 AEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSA 248
Query: 206 EGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
S + + L ++ R
Sbjct: 249 FSGISE----DGKDFIRKLLLADPNTRMTIHQA 277
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 97.1 bits (241), Expect = 1e-23
Identities = 48/242 (19%), Positives = 83/242 (34%), Gaps = 24/242 (9%)
Query: 17 LKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76
LK VL + + + E A+ +L L L G +V E P +L
Sbjct: 44 LKPDVLSQPEAMDDF-IREVNAMHSLDHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDR- 100
Query: 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK 136
R A+ +A+ + Y SK ++ DL A +L ++ FGLM+
Sbjct: 101 LRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF-IHRDLAARNLLLATRDLVKIGDFGLMR 159
Query: 137 NSRDGKSYSTN-------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP----- 184
+ A+ PE ++T + S + FG L ++ + P
Sbjct: 160 ALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLN 219
Query: 185 PSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMS 244
S L I + L D ++ + +C + +RP +L L+
Sbjct: 220 GSQILHKIDKEGERL--------PRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLE 271
Query: 245 LQ 246
Q
Sbjct: 272 AQ 273
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 98.2 bits (244), Expect = 2e-23
Identities = 35/225 (15%), Positives = 79/225 (35%), Gaps = 13/225 (5%)
Query: 21 VLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80
++ + L +E + R + +L +E +++ EF+ + + + +
Sbjct: 37 FVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERI-NTS 95
Query: 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPR--LSSFGLMKNS 138
+ + + +AL++ S + D+ I++ + + FG +
Sbjct: 96 AFELNEREIVSYVHQVCEALQFLHSHNIG-HFDIRPENIIYQTRRSSTIKIIEFGQARQL 154
Query: 139 RDGKSYSTN---LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSK 195
+ G ++ + PE + V+ + ++S GT++ LLSG + + I
Sbjct: 155 KPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIEN 214
Query: 196 --NFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
N D S E + R L E + R A
Sbjct: 215 IMNAEYTFDEEAFKEISI----EAMDFVDRLLVKERKSRMTASEA 255
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 96.7 bits (240), Expect = 9e-23
Identities = 38/211 (18%), Positives = 71/211 (33%), Gaps = 9/211 (4%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
E + L +L NL + E +L+ EF+ L + E M A +
Sbjct: 74 KNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRI-AAEDYKMSEAEVINY 132
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFD--KDGNPRLSSFGLMKNSRDGKS---YSTN 147
+ L++ ++ D+ I+ + K + ++ FGL + +
Sbjct: 133 MRQACEGLKHMHEHSI-VHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTAT 191
Query: 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEG 207
F PE + V + +++ G + LLSG P D + + + D +
Sbjct: 192 AEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGL--SPFAGEDDLETLQNVKRCDWEFDE 249
Query: 208 HFSNDEGTELVRLASRCLQSEARERPNAKSL 238
+ E LQ E R+R
Sbjct: 250 DAFSSVSPEAKDFIKNLLQKEPRKRLTVHDA 280
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 94.3 bits (234), Expect = 1e-22
Identities = 36/213 (16%), Positives = 65/213 (30%), Gaps = 13/213 (6%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
+E L E + G E + + L E+ L + M R
Sbjct: 51 KKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRF 108
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN----- 147
L + Y G + D+ +L D+ N ++S FGL R
Sbjct: 109 FHQLMAGVVYLHGIGI-THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 167
Query: 148 -LAFTPPEYMRTGRVTPESV-VYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSAL 205
L + PE ++ E V V+S G +L +L+G+ + + +
Sbjct: 168 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ---EYSDWKEKKT 224
Query: 206 EGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
+ + + L + L R +
Sbjct: 225 YLNPWKKIDSAPLALLHKILVENPSARITIPDI 257
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 94.4 bits (234), Expect = 3e-22
Identities = 45/225 (20%), Positives = 81/225 (36%), Gaps = 13/225 (5%)
Query: 17 LKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76
LK V+ D E +E+ L ++ + V E++ L H+
Sbjct: 35 LKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI 94
Query: 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK 136
+ A + L++ SKG +Y DL IL DKDG+ +++ FG+ K
Sbjct: 95 Q--SCHKFDLSRATFYAAEIILGLQFLHSKGI-VYRDLKLDNILLDKDGHIKIADFGMCK 151
Query: 137 NSRDGKSYSTNLAFT----PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLI 192
+ G + + T PE + + +SFG +L ++L G+ P H D
Sbjct: 152 ENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ--SPFHGQDEE 209
Query: 193 RSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKS 237
+ + + + E L + E +R +
Sbjct: 210 ELFHSIRMDNPFYPRWLEK----EAKDLLVKLFVREPEKRLGVRG 250
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 93.2 bits (231), Expect = 6e-22
Identities = 32/211 (15%), Positives = 64/211 (30%), Gaps = 9/211 (4%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
E + ++ + L L+ + + L + E R+
Sbjct: 55 ENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIV--EKGFYTERDASRL 112
Query: 93 ALYLAQALEYCSSKGRA--LYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYST---N 147
+ A++Y G N D+D +S FGL K G ST
Sbjct: 113 IFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGT 172
Query: 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEG 207
+ PE + + +S G + LL G PP + + + +L + +
Sbjct: 173 PGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGY--PPFYDENDAKLFEQILKAEYEFDS 230
Query: 208 HFSNDEGTELVRLASRCLQSEARERPNAKSL 238
+ +D ++ + +R +
Sbjct: 231 PYWDDISDSAKDFIRHLMEKDPEKRFTCEQA 261
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 92.8 bits (230), Expect = 7e-22
Identities = 36/222 (16%), Positives = 73/222 (32%), Gaps = 19/222 (8%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
E + L L + ++ + N L K++
Sbjct: 56 TRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFY 113
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------KSYST 146
+ ALEY K ++ DL IL ++D + +++ FG K S+
Sbjct: 114 TAEIVSALEYLHGK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 172
Query: 147 NLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALE 206
+ PE + S +++ G ++ L++G PP R+ N L+ ++
Sbjct: 173 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGL--PP------FRAGNEYLIFQKIIK 224
Query: 207 GHFSNDEGT--ELVRLASRCLQSEARERPNAKSLVISLMSLQ 246
+ E + L + L +A +R + +
Sbjct: 225 LEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKA 266
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 93.0 bits (230), Expect = 8e-22
Identities = 44/233 (18%), Positives = 83/233 (35%), Gaps = 25/233 (10%)
Query: 34 EEAKAVGNLRSERLANLIGCCYEADERL-LVAEFMPNETLAKHLFH-------------- 78
E + + NL+G C + L ++ EF L+ +L
Sbjct: 66 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPED 125
Query: 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNS 138
+ + + +A+ +E+ +S+ ++ DL A IL + ++ FGL ++
Sbjct: 126 LYKDFLTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSEKNVVKICDFGLARDI 184
Query: 139 RDGKSY-STNLAFTPPEYM-----RTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLI 192
Y A P ++M T +S V+SFG +L ++ S P +
Sbjct: 185 YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP---GVK 241
Query: 193 RSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 245
+ F + + E+ + C E +RP LV L +L
Sbjct: 242 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 294
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 90.1 bits (223), Expect = 4e-21
Identities = 38/216 (17%), Positives = 70/216 (32%), Gaps = 15/216 (6%)
Query: 33 LEEAKAVGNLRSERLA-NLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLR 91
L+E + + L LV + M L +L E + +
Sbjct: 57 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLT--EKVTLSEKETRK 114
Query: 92 VALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYST---NL 148
+ L + + + DL IL D D N +L+ FG G+
Sbjct: 115 IMRALLEVICALHKLNIV-HRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTP 173
Query: 149 AFTPPEYMRTGRV------TPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD 202
++ PE + E ++S G ++ LL+G PP + ++ +
Sbjct: 174 SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGS--PPFWHRKQMLMLRMIMSGN 231
Query: 203 SALEGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
+D + L SR L + ++R A+
Sbjct: 232 YQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEA 267
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 90.2 bits (223), Expect = 5e-21
Identities = 40/226 (17%), Positives = 72/226 (31%), Gaps = 17/226 (7%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERL----LVAEFMPNETLAKHLFHWETQPMKWAM 88
EA+ L + + +V E++ TL + PM
Sbjct: 55 RREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE--GPMTPKR 112
Query: 89 RLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNL 148
+ V QAL + G ++ D+ I+ ++ FG+ + D + T
Sbjct: 113 AIEVIADACQALNFSHQNG-IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 171
Query: 149 -------AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLM 201
+ PE R V S VYS G +L ++L+G+ PP + +
Sbjct: 172 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE--PPFTGDSPVSVAYQHVRE 229
Query: 202 DSALEGHFSNDEGTELVRLASRCLQSEARERP-NAKSLVISLMSLQ 246
D +L + + L R A + L+ +
Sbjct: 230 DPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH 275
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 90.9 bits (225), Expect = 8e-21
Identities = 41/203 (20%), Positives = 70/203 (34%), Gaps = 9/203 (4%)
Query: 34 EEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVA 93
V + + + D+ + + M L HL A A
Sbjct: 56 IMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH--GVFSEADMRFYA 113
Query: 94 LYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN--LAFT 151
+ LE+ ++ +Y DL IL D+ G+ R+S GL + K +++ +
Sbjct: 114 AEIILGLEHMHNRFV-VYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYM 172
Query: 152 PPEYMRTGR-VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFS 210
PE ++ G + +S G ML LL G H + K+ + M +
Sbjct: 173 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT---KDKHEIDRMTLTMAVELP 229
Query: 211 NDEGTELVRLASRCLQSEARERP 233
+ EL L LQ + R
Sbjct: 230 DSFSPELRSLLEGLLQRDVNRRL 252
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 87.5 bits (216), Expect = 5e-20
Identities = 31/213 (14%), Positives = 65/213 (30%), Gaps = 12/213 (5%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
E + ++ + L + +L+ E + L E + +
Sbjct: 61 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDF--LAEKESLTEEEATEF 118
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPR----LSSFGLMKNSRDGKSYSTNL 148
+ + Y S A + DL I+ P+ + FGL G +
Sbjct: 119 LKQILNGVYYLHSLQIA-HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF 177
Query: 149 ---AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSAL 205
F PE + + E+ ++S G + LLSG + + ++
Sbjct: 178 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN--VSAVNYEF 235
Query: 206 EGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
E + ++ R L + ++R +
Sbjct: 236 EDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDS 268
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 87.1 bits (215), Expect = 1e-19
Identities = 39/204 (19%), Positives = 83/204 (40%), Gaps = 10/204 (4%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
+E + + + + G +A + ++ +++ L ++Q +
Sbjct: 52 NDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGEL--FSLLRKSQRFPNPVAKFY 109
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD-GKSYSTNLAFT 151
A + ALEY SK +Y DL IL DK+G+ +++ FG K D + +
Sbjct: 110 AAEVCLALEYLHSKD-IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYI 168
Query: 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSN 211
PE + T +SFG ++ ++L+G P + + +++ +L + F+
Sbjct: 169 APEVVSTKPYNKSIDWWSFGILIYEMLAGY--TPFYDSNTMKTYEKILNAELRFPPFFNE 226
Query: 212 DEGTELVRLASRCLQSEARERPNA 235
++ L SR + + +R
Sbjct: 227 ----DVKDLLSRLITRDLSQRLGN 246
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 85.7 bits (211), Expect = 2e-19
Identities = 44/231 (19%), Positives = 90/231 (38%), Gaps = 26/231 (11%)
Query: 33 LEEAKAVGNLRSER-LANLIGCCYEADERLLVAEFMPNETLAKHLFHW------------ 79
+ E + + + + + NL+G C + ++ E+ L ++L
Sbjct: 66 ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPS 125
Query: 80 --ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKN 137
+ + + A +A+ +EY +SK ++ DL A +L +D +++ FGL ++
Sbjct: 126 HNPEEQLSSKDLVSCAYQVARGMEYLASKKC-IHRDLAARNVLVTEDNVMKIADFGLARD 184
Query: 138 SRDGKSY-STNLAFTPPEYM-----RTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDL 191
Y T P ++M T +S V+SFG +L ++ + P + +
Sbjct: 185 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG-SPYPGVPV 243
Query: 192 IRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISL 242
+ L+ ++ EL + C + +RP K LV L
Sbjct: 244 ---EELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 291
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 83.6 bits (206), Expect = 8e-19
Identities = 44/212 (20%), Positives = 79/212 (37%), Gaps = 20/212 (9%)
Query: 33 LEEAKAVGNLRS--ERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRL 90
E + + S + L+ D +L+ E E ++ +
Sbjct: 55 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT-ERGALQEELAR 113
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKD-GNPRLSSFGLMKNSRDG--KSYSTN 147
+ +A+ +C + G L+ D+ IL D + G +L FG +D +
Sbjct: 114 SFFWQVLEAVRHCHNCGV-LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGT 172
Query: 148 LAFTPPEYMRTGRVTPESV-VYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALE 206
++PPE++R R S V+S G +L D++ G P H ++IR + F
Sbjct: 173 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI-PFEHDEEIIRGQVF--------- 222
Query: 207 GHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
F +E L CL +RP + +
Sbjct: 223 --FRQRVSSECQHLIRWCLALRPSDRPTFEEI 252
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 83.4 bits (205), Expect = 2e-18
Identities = 42/248 (16%), Positives = 70/248 (28%), Gaps = 30/248 (12%)
Query: 18 KSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77
E+ D L E K + L + L+ LV +FM + +
Sbjct: 33 LGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLE--VII 90
Query: 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKN 137
+ + + L Q LEY + DL +L D++G +L+ FGL K+
Sbjct: 91 KDNSLVLTPSHIKAYMLMTLQGLEYLHQHWIL-HRDLKPNNLLLDENGVLKLADFGLAKS 149
Query: 138 SRDGKSYSTNLAFT-----PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHI--------- 183
T+ T P +++ G +L +LL
Sbjct: 150 FGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQ 209
Query: 184 ----------PPSHALDLIRSKNFLLLMDSALE---GHFSNDEGTELVRLASRCLQSEAR 230
P + S + S H + G +L+ L
Sbjct: 210 LTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPC 269
Query: 231 ERPNAKSL 238
R A
Sbjct: 270 ARITATQA 277
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 80.5 bits (198), Expect = 2e-17
Identities = 34/211 (16%), Positives = 72/211 (34%), Gaps = 17/211 (8%)
Query: 42 LRSERLANLIGCCYEADER----LLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLA 97
+ + ++ L+V E + L + Q + +
Sbjct: 62 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 121
Query: 98 QALEYCSSKGRALYHDLNAYRILFDK---DGNPRLSSFGLMKNSRDGKSYSTN---LAFT 151
+A++Y S A + D+ +L+ + +L+ FG K + S +T +
Sbjct: 122 EAIQYLHSINIA-HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYV 180
Query: 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSN 211
PE + + ++S G ++ LL G PP ++ + + + F N
Sbjct: 181 APEVLGPEKYDKSCDMWSLGVIMYILLCGY--PPFYSNHGLAISPGMKTRIRMGQYEFPN 238
Query: 212 DEGT----ELVRLASRCLQSEARERPNAKSL 238
E + E+ L L++E +R
Sbjct: 239 PEWSEVSEEVKMLIRNLLKTEPTQRMTITEF 269
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 80.3 bits (197), Expect = 3e-17
Identities = 34/240 (14%), Positives = 77/240 (32%), Gaps = 35/240 (14%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW-ETQPMKWAMRLR 91
L E K + R E + + + ++ + L+ +TQ +
Sbjct: 54 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICY 113
Query: 92 VALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYST----- 146
+ + L+Y S L+ DL +L + + ++ FGL + + ++
Sbjct: 114 FLYQILRGLKYIHSANV-LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 172
Query: 147 --NLAFTPPEYMRTGRVTPESV-VYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 203
+ PE M + +S+ ++S G +L ++LS + I P + +L
Sbjct: 173 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 232
Query: 204 ALE-------------------------GHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
+ E + ++ + L + L +R +
Sbjct: 233 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 292
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 78.3 bits (192), Expect = 8e-17
Identities = 34/226 (15%), Positives = 66/226 (29%), Gaps = 28/226 (12%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADERL-LVAEFMPNETLAKHLFHWETQPMKWAMRLRVA 93
E+K ++ I C + +V E + LF++ ++ L +A
Sbjct: 52 ESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLE--DLFNFCSRKFSLKTVLLLA 109
Query: 94 LYLAQALEYCSSKGRALYHDLNAYRILF---DKDGNPRLSSFGLMKNSRDGKSYSTN--- 147
+ +EY SK ++ D+ L K + FGL K RD +++
Sbjct: 110 DQMISRIEYIHSKNF-IHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYR 168
Query: 148 --------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSK---- 195
+ + + S G +L+ G R K
Sbjct: 169 ENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERI 228
Query: 196 --NFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239
+ L + + E + C ++P+ L
Sbjct: 229 SEKKMSTPIEVLCKGYPS----EFATYLNFCRSLRFDDKPDYSYLR 270
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 74.5 bits (182), Expect = 2e-15
Identities = 31/234 (13%), Positives = 66/234 (28%), Gaps = 29/234 (12%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLA----KHLFHWETQPMKWAM 88
+ + + + L C + + E + +L +
Sbjct: 58 VAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTET 117
Query: 89 RLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN- 147
+ L + L++ S ++ DL IL G +L+ FGL + + ++
Sbjct: 118 IKDMMFQLLRGLDFLHSHR-VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVV 176
Query: 148 --LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHI---------------------P 184
L + PE + ++S G + ++ K +
Sbjct: 177 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGE 236
Query: 185 PSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
D+ + + F D L +CL +R +A S
Sbjct: 237 EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSA 290
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 73.4 bits (179), Expect = 3e-15
Identities = 34/234 (14%), Positives = 77/234 (32%), Gaps = 31/234 (13%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
+ E + L+ + L + +LV E + + L ++
Sbjct: 48 IREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLK--KLLDVCEGGLESVTAKSF 105
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP 152
L L + YC + L+ DL +L +++G +++ FGL + T+ T
Sbjct: 106 LLQLLNGIAYCHDRR-VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTL 164
Query: 153 -----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPS--------------------- 186
M + + + ++S G + ++++G + P
Sbjct: 165 WYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKN 224
Query: 187 --HALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
+ +L + + + F + L S+ L+ + +R AK
Sbjct: 225 WPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQA 278
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 73.7 bits (180), Expect = 4e-15
Identities = 42/209 (20%), Positives = 76/209 (36%), Gaps = 13/209 (6%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
+ E++ + N R L L D V E+ L HL + A
Sbjct: 53 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY-- 110
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP 152
+ ALEY S+ +Y D+ ++ DKDG+ +++ FGL K + TP
Sbjct: 111 GAEIVSALEYLHSRDV-VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTP 169
Query: 153 ----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGH 208
PE + + G ++ +++ G+ P + D R +L+ +
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHERLFELILMEEIRFPRT 227
Query: 209 FSNDEGTELVRLASRCLQSEARERPNAKS 237
S E L + L+ + ++R
Sbjct: 228 LSP----EAKSLLAGLLKKDPKQRLGGGP 252
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 73.4 bits (179), Expect = 4e-15
Identities = 39/234 (16%), Positives = 83/234 (35%), Gaps = 30/234 (12%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
+ E + L + L+ + ++ LV EF+ ++ L K + + +
Sbjct: 49 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 107
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFT- 151
L Q L +C S R L+ DL +L + +G +L+ FGL + T+ T
Sbjct: 108 LFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL 166
Query: 152 ----PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHI-PPSHALDLIRS--KNFLLLMDSA 204
P + + ++S G + ++++ + + P +D + + +
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 226
Query: 205 LEGHFSNDE--------------------GTELVRLASRCLQSEARERPNAKSL 238
G S + + L S+ L + +R +AK+
Sbjct: 227 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 280
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 72.9 bits (178), Expect = 5e-15
Identities = 21/234 (8%), Positives = 53/234 (22%), Gaps = 20/234 (8%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
+E + L + + ++ + + + L +
Sbjct: 48 RDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLLGPS-LEDLLDLCGRKFSVKTVAMA 106
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDK-----DGNPRLSSFGLMKNSRDGKSYSTN 147
A + ++ K +Y D+ L + + FG++K RD +
Sbjct: 107 AKQMLARVQSIHEKS-LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHI 165
Query: 148 -----------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKN 196
+ + + + G + + L G + K
Sbjct: 166 PYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKY 225
Query: 197 FLLLMDSALEGHFSNDEGT--ELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248
+ G E + P+ L + +
Sbjct: 226 ERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLER 279
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 73.3 bits (179), Expect = 7e-15
Identities = 32/235 (13%), Positives = 75/235 (31%), Gaps = 30/235 (12%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH--WETQPMKWAMRL 90
E + + ++R E + L+ + +F + + +
Sbjct: 65 YRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQ 124
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAF 150
+ + + L Y + G + DL + ++D ++ FGL + + + +
Sbjct: 125 FLVYQMLKGLRYIHAAGII-HRDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVVTRW 183
Query: 151 --TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHI-------------------PPSHAL 189
P + R T ++S G ++ ++++GK + PP+ +
Sbjct: 184 YRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFV 243
Query: 190 DLIRSKNFLLLMDSALE------GHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
++S M E + V L + L +A +R A
Sbjct: 244 QRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEA 298
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 73.3 bits (179), Expect = 7e-15
Identities = 44/240 (18%), Positives = 70/240 (29%), Gaps = 38/240 (15%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADER------LLVAEFMPNETLAKHLFHWET-QPMKWA 87
E + + L + L Y + E+ LV +++P + Q +
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 88 MRLRVALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNP-RLSSFGLMKNSRDGKSYS 145
L ++L Y S G + H D+ +L D D +L FG K G+
Sbjct: 123 YVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 180
Query: 146 TNLAFT----PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHI----PPSHALDLI----- 192
+ + P T V+S G +L +LL G+ I L I
Sbjct: 181 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLG 240
Query: 193 --------------RSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
F + F E + L SR L+ R
Sbjct: 241 TPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEA 300
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 69.6 bits (169), Expect = 7e-14
Identities = 33/235 (14%), Positives = 69/235 (29%), Gaps = 32/235 (13%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L E + L+ + + L + + LV EF + F + +
Sbjct: 49 LREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLK--KYFDSCNGDLDPEIVKSF 106
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFT- 151
L + L +C S+ L+ DL +L +++G +L++FGL + + T
Sbjct: 107 LFQLLKGLGFCHSRNV-LHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTL 165
Query: 152 ----PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP----------------------- 184
P + ++S G + +L +
Sbjct: 166 WYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEE 225
Query: 185 -PSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
L K + + + + L L+ +R +A+
Sbjct: 226 QWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEA 280
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 68.7 bits (167), Expect = 2e-13
Identities = 41/218 (18%), Positives = 77/218 (35%), Gaps = 12/218 (5%)
Query: 18 KSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77
K V++ + TLN E + + + L L + +V E++ + HL
Sbjct: 76 KQKVVKLKQIEHTLN--EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL- 132
Query: 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKN 137
A + EY S +Y DL +L D+ G +++ FG K
Sbjct: 133 -RRIGRFSEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 138 SRD-GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKN 196
+ + PE + + ++ G ++ ++ +G PP A I+
Sbjct: 191 VKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGY--PPFFADQPIQIYE 248
Query: 197 FLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234
++ HFS+ +L L LQ + +R
Sbjct: 249 KIVSGKVRFPSHFSS----DLKDLLRNLLQVDLTKRFG 282
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.6 bits (164), Expect = 4e-13
Identities = 44/249 (17%), Positives = 77/249 (30%), Gaps = 46/249 (18%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADER--------LLVAEFMPNETLAKHLFHWETQPM 84
L E K + L+ E + NLI C LV +F ++ L
Sbjct: 57 LREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLA--GLLSNVLVKF 114
Query: 85 KWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY 144
+ RV L L Y L+ D+ A +L +DG +L+ FGL + K+
Sbjct: 115 TLSEIKRVMQMLLNGLYYIHRNK-ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNS 173
Query: 145 STN--------LAFTPPEYMRTGR-VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSK 195
N L + PPE + R P ++ G ++ ++ + I + +
Sbjct: 174 QPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLAL 233
Query: 196 NFLLLMDSALEGHFSNDEGT--------------------------ELVRLASRCLQSEA 229
L E + D + L + L +
Sbjct: 234 ISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDP 293
Query: 230 RERPNAKSL 238
+R ++
Sbjct: 294 AQRIDSDDA 302
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 66.4 bits (161), Expect = 9e-13
Identities = 41/226 (18%), Positives = 77/226 (34%), Gaps = 14/226 (6%)
Query: 18 KSSVLESSDLGETLNLEEAKAVGNLRSER-LANLIGCCYEADERLLVAEFMPNETLAKHL 76
K+++++ + E E + + ++R L L + L+ +++ L HL
Sbjct: 62 KATIVQKAKTTEHT-RTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHL 120
Query: 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK 136
E + ALE+ G +Y D+ IL D +G+ L+ FGL K
Sbjct: 121 SQRERFTEHEVQI--YVGEIVLALEHLHKLG-IIYRDIKLENILLDSNGHVVLTDFGLSK 177
Query: 137 NSRDGKSYSTNLAFTPPEYMRT-------GRVTPESVVYSFGTMLLDLLSGKHIPPSHAL 189
++ EYM +S G ++ +LL+G P
Sbjct: 178 EFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGA--SPFTVD 235
Query: 190 DLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNA 235
S+ + E + + L R L + ++R
Sbjct: 236 GEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGC 281
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.1 bits (134), Expect = 3e-09
Identities = 34/235 (14%), Positives = 77/235 (32%), Gaps = 30/235 (12%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH--WETQPMKWAMRL 90
E + + +++ E + L+ A + L + + Q +
Sbjct: 65 YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ 124
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL--MKNSRDGKSYSTNL 148
+ + + L+Y S + DL + ++D ++ FGL + +T
Sbjct: 125 FLIYQILRGLKYIHSADII-HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRW 183
Query: 149 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKH-------------------IPPSHAL 189
P + ++S G ++ +LL+G+ P + L
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 243
Query: 190 DLIRS---KNFLLLMDSALEGHFSN---DEGTELVRLASRCLQSEARERPNAKSL 238
I S +N++ + + +F+N V L + L ++ +R A
Sbjct: 244 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQA 298
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 55.6 bits (133), Expect = 4e-09
Identities = 38/246 (15%), Positives = 75/246 (30%), Gaps = 46/246 (18%)
Query: 33 LEEAKAVGNLR-SERLANLIGCCYEADERL--LVAEFMPNETLAKHLFHWETQPMKWAMR 89
E K + NLR + L + R LV E + N + Q +
Sbjct: 77 KREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY-----QTLTDYDI 131
Query: 90 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNP-RLSSFGLMKNSRDGKSYS--- 145
+ +AL+YC S G + D+ + ++ D + RL +GL + G+ Y+
Sbjct: 132 RFYMYEILKALDYCHSMGIM-HRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV 190
Query: 146 -TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKH---------------------- 182
+ P + ++S G ML ++ K
Sbjct: 191 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE 250
Query: 183 ----------IPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232
I + I ++ + + + E + + L+ + + R
Sbjct: 251 DLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSR 310
Query: 233 PNAKSL 238
A+
Sbjct: 311 LTAREA 316
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 55.8 bits (133), Expect = 4e-09
Identities = 33/260 (12%), Positives = 77/260 (29%), Gaps = 52/260 (20%)
Query: 31 LNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW---ETQPMKWA 87
+N + ++ + + L+ + + L E + +
Sbjct: 66 VNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLI 125
Query: 88 MRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNP------RLSSFGLMKNSRDG 141
+++ L L+Y + ++ D+ +L + +P +++ G +
Sbjct: 126 YVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH 185
Query: 142 KSYS-TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHI----------------- 183
+ S + PE + + ++S ++ +L++G +
Sbjct: 186 YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIA 245
Query: 184 --------PPSHALDLIRSKNFLLLMDSALEG-----------------HFSNDEGTELV 218
PS+ L + L FS DE E+
Sbjct: 246 QIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEIS 305
Query: 219 RLASRCLQSEARERPNAKSL 238
S LQ + R+R +A L
Sbjct: 306 DFLSPMLQLDPRKRADAGGL 325
|
| >d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 201 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: STIP1 homology and U box-containing protein 1, STUB1 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 43.0 bits (100), Expect = 2e-05
Identities = 22/96 (22%), Positives = 38/96 (39%), Gaps = 1/96 (1%)
Query: 322 KKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQV 381
K+ G+ F + + A CY + I + Y R L YL P++AL D +A
Sbjct: 8 KEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALE 66
Query: 382 VSPDWPTALYLQAACLFSLGMENDARETLKDGTNLE 417
+ A + C + ++A L+ +L
Sbjct: 67 LDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLA 102
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 423 | |||
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 100.0 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.83 | |
| d1elwa_ | 117 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.83 | |
| d2c2la1 | 201 | STIP1 homology and U box-containing protein 1, STU | 99.81 | |
| d1a17a_ | 159 | Protein phosphatase 5 {Human (Homo sapiens) [TaxId | 99.79 | |
| d2fbna1 | 153 | Putative 70 kda peptidylprolyl isomerase PFL2275c | 99.76 | |
| d1p5qa1 | 170 | FKBP52 (FKBP4), C-terminal domain {Human (Homo sap | 99.74 | |
| d1kt1a1 | 168 | FKBP51, C-terminal domain {Monkey (Saimiri bolivie | 99.72 | |
| d1elra_ | 128 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.72 | |
| d1ihga1 | 169 | Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | 99.71 | |
| d1hxia_ | 112 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.67 | |
| d1hh8a_ | 192 | Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {H | 99.65 | |
| d1xnfa_ | 259 | Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | 99.64 | |
| d2hr2a1 | 156 | Hypothetical protein CT2138 {Chlorobium tepidum [T | 99.59 | |
| d1nzna_ | 122 | Mitochondria fission protein Fis1 {Human (Homo sap | 99.59 | |
| d1hh8a_ | 192 | Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {H | 99.56 | |
| d1zu2a1 | 145 | Mitochondrial import receptor subunit tom20-3 {Tha | 99.51 | |
| d1fcha_ | 323 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.49 | |
| d2h6fa1 | 315 | Protein farnesyltransferase alpha-subunit {Human ( | 99.45 | |
| d2h6fa1 | 315 | Protein farnesyltransferase alpha-subunit {Human ( | 99.44 | |
| d1fcha_ | 323 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.44 | |
| d1tjca_ | 95 | Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human | 99.4 | |
| d1w3ba_ | 388 | O-GlcNAc transferase p110 subunit, OGT {Human (Hom | 99.39 | |
| d1w3ba_ | 388 | O-GlcNAc transferase p110 subunit, OGT {Human (Hom | 99.34 | |
| d2ff4a2 | 179 | Probable regulatory protein EmbR, middle domain {M | 99.26 | |
| d1ihga1 | 169 | Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | 99.25 | |
| d1xnfa_ | 259 | Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | 99.22 | |
| d1elwa_ | 117 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.22 | |
| d1kt1a1 | 168 | FKBP51, C-terminal domain {Monkey (Saimiri bolivie | 99.21 | |
| d1p5qa1 | 170 | FKBP52 (FKBP4), C-terminal domain {Human (Homo sap | 99.2 | |
| d2fbna1 | 153 | Putative 70 kda peptidylprolyl isomerase PFL2275c | 99.15 | |
| d1a17a_ | 159 | Protein phosphatase 5 {Human (Homo sapiens) [TaxId | 99.14 | |
| d1elra_ | 128 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.08 | |
| d2c2la1 | 201 | STIP1 homology and U box-containing protein 1, STU | 99.05 | |
| d1hxia_ | 112 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.04 | |
| d1tjca_ | 95 | Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human | 99.03 | |
| d1zu2a1 | 145 | Mitochondrial import receptor subunit tom20-3 {Tha | 98.93 | |
| d1zbpa1 | 264 | Hypothetical protein VPA1032 {Vibrio parahaemolyti | 98.91 | |
| d1nzna_ | 122 | Mitochondria fission protein Fis1 {Human (Homo sap | 98.91 | |
| d1ya0a1 | 497 | SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | 98.85 | |
| d1qqea_ | 290 | Vesicular transport protein sec17 {Baker's yeast ( | 98.84 | |
| d1dcea1 | 334 | Rab geranylgeranyltransferase alpha-subunit, N-ter | 98.77 | |
| d1dcea1 | 334 | Rab geranylgeranyltransferase alpha-subunit, N-ter | 98.72 | |
| d1qqea_ | 290 | Vesicular transport protein sec17 {Baker's yeast ( | 98.7 | |
| d1hz4a_ | 366 | Transcription factor MalT domain III {Escherichia | 98.68 | |
| d1ya0a1 | 497 | SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | 98.52 | |
| d1hz4a_ | 366 | Transcription factor MalT domain III {Escherichia | 98.46 | |
| d2hr2a1 | 156 | Hypothetical protein CT2138 {Chlorobium tepidum [T | 98.41 | |
| d2pqrb1 | 124 | Mitochondria fission protein Fis1 {Baker's yeast ( | 98.35 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 98.33 | |
| d2pqrb1 | 124 | Mitochondria fission protein Fis1 {Baker's yeast ( | 98.21 | |
| d2onda1 | 308 | Cleavage stimulation factor 77 kDa subunit CSTF3 { | 98.2 | |
| d1zbpa1 | 264 | Hypothetical protein VPA1032 {Vibrio parahaemolyti | 98.08 | |
| d2onda1 | 308 | Cleavage stimulation factor 77 kDa subunit CSTF3 { | 98.0 | |
| d1ouva_ | 265 | Cysteine rich protein C (HcpC) {Helicobacter pylor | 97.94 | |
| d1klxa_ | 133 | Cysteine rich protein B (HcpB) {Helicobacter pylor | 97.91 | |
| d2ff4a2 | 179 | Probable regulatory protein EmbR, middle domain {M | 97.87 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 97.61 | |
| d1ouva_ | 265 | Cysteine rich protein C (HcpC) {Helicobacter pylor | 97.58 | |
| d1klxa_ | 133 | Cysteine rich protein B (HcpB) {Helicobacter pylor | 97.43 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 96.4 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 94.81 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 94.27 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 92.48 | |
| d1wfda_ | 93 | Hypothetical protein 1500032H18Rik {Mouse (Mus mus | 89.75 | |
| d1wr0a1 | 77 | Vacuolar sorting protein 4b (VPS4B, SKD1 protein) | 88.42 | |
| d1wfda_ | 93 | Hypothetical protein 1500032H18Rik {Mouse (Mus mus | 83.32 | |
| d2crba1 | 83 | Nuclear receptor binding factor 2, NRBF2, N-termin | 81.92 |
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.9e-53 Score=390.06 Aligned_cols=242 Identities=19% Similarity=0.282 Sum_probs=210.4
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW 79 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~ 79 (423)
|+||.||++.+. +..+|+|++.......+.|.+|+++|++++|||||+++++|.+++..++|||||++|+|.+++.+.
T Consensus 28 G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~~g~l~~~l~~~ 107 (287)
T d1opja_ 28 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC 107 (287)
T ss_dssp TTTSSEEEEEEGGGTEEEEEEECCTTCSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHS
T ss_pred CCCeEEEEEEECCCCeEEEEEEECCccchHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEeecccCcchHHHhhhc
Confidence 999999999985 677999998877777888999999999999999999999999999999999999999999999766
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCCc-----cccCcccCCcc
Q 014484 80 ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS-----YSTNLAFTPPE 154 (423)
Q Consensus 80 ~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-----~~~t~~y~aPE 154 (423)
....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++....... ..|++.|+|||
T Consensus 108 ~~~~~~~~~~~~i~~qi~~gL~yLH~~~-iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~~~~~~g~~~y~aPE 186 (287)
T d1opja_ 108 NRQEVSAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 186 (287)
T ss_dssp CTTTSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSEEETTEEECGGGCCHH
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHCC-cccCccccCeEEECCCCcEEEccccceeecCCCCceeeccccccccccChH
Confidence 6778999999999999999999999999 99999999999999999999999999987654322 34688999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCC
Q 014484 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (423)
Q Consensus 155 ~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (423)
++.+..++.++|||||||++|||++|..||.... ........+........+..+++++.+|+.+||+.||++|||
T Consensus 187 ~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~----~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps 262 (287)
T d1opja_ 187 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI----DLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPS 262 (287)
T ss_dssp HHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTC----CHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred HHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcc----hHHHHHHHHhcCCCCCCCccchHHHHHHHHHHcCCCHhHCcC
Confidence 9999999999999999999999999876665431 112223333344455667778899999999999999999999
Q ss_pred HHHHHHHHHhhhhh
Q 014484 235 AKSLVISLMSLQKE 248 (423)
Q Consensus 235 ~~~vl~~l~~~~~~ 248 (423)
++++++.|+.+...
T Consensus 263 ~~ei~~~L~~~~~~ 276 (287)
T d1opja_ 263 FAEIHQAFETMFQE 276 (287)
T ss_dssp HHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999877554
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.4e-53 Score=383.29 Aligned_cols=242 Identities=19% Similarity=0.301 Sum_probs=198.6
Q ss_pred CCCCCccceeeee-cceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccC
Q 014484 1 MGGRCSKFSICWF-HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW 79 (423)
Q Consensus 1 ~G~~g~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~ 79 (423)
-|+||.||++.+. +..+++|.+.......+.|.+|++++++++|||||+++++|..++..++||||+++|+|.+++..
T Consensus 15 ~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~~g~L~~~l~~- 93 (263)
T d1sm2a_ 15 SGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRT- 93 (263)
T ss_dssp CCSSCCEEEEEETTTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHT-
T ss_pred eCCCeEEEEEEECCCCEEEEEEECCCcCcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecCCCcHHHHhhc-
Confidence 3999999999985 56699999887777778899999999999999999999999999999999999999999999864
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-----CccccCcccCCcc
Q 014484 80 ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYSTNLAFTPPE 154 (423)
Q Consensus 80 ~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~~t~~y~aPE 154 (423)
....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....||+.|+|||
T Consensus 94 ~~~~~~~~~~~~i~~qia~gl~~lH~~~-iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE 172 (263)
T d1sm2a_ 94 QRGLFAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE 172 (263)
T ss_dssp TTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCTTCSGGGEEECGGGCEEECSCC------------------CTTSCCHH
T ss_pred cccCCCHHHHHHHHHHHHHHHHhhhccc-eeecccchhheeecCCCCeEecccchheeccCCCceeecceecCcccCChH
Confidence 4467899999999999999999999999 999999999999999999999999999865433 2345789999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCC
Q 014484 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (423)
Q Consensus 155 ~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (423)
++.+..++.++|||||||++|||+|+..|+.... ....+...+........|..+++++.+++.+||+.||++|||
T Consensus 173 ~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~----~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~p~~Rps 248 (263)
T d1sm2a_ 173 VFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR----SNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPA 248 (263)
T ss_dssp HHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSC----CHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred HhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCC----CHHHHHHHHHhcCCCCCccccCHHHHHHHHHHccCCHhHCcC
Confidence 9999999999999999999999999655544321 111122222233344456667889999999999999999999
Q ss_pred HHHHHHHHHhhhhh
Q 014484 235 AKSLVISLMSLQKE 248 (423)
Q Consensus 235 ~~~vl~~l~~~~~~ 248 (423)
+++++++|+++.+.
T Consensus 249 ~~~il~~L~~i~es 262 (263)
T d1sm2a_ 249 FSRLLRQLAEIAES 262 (263)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC
Confidence 99999999988654
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7e-53 Score=383.86 Aligned_cols=243 Identities=18% Similarity=0.234 Sum_probs=196.1
Q ss_pred CCCCccceeeeecceeeeeecCCC---hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICWFHCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
|+||.||++.+.+ .+++|++... ....+.|.+|++++.+++|||||++++++.+ +..++|||||+||+|.+++..
T Consensus 19 G~fg~Vy~~~~~~-~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~-~~~~lv~Ey~~~g~L~~~l~~ 96 (276)
T d1uwha_ 19 GSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLAIVTQWCEGSSLYHHLHI 96 (276)
T ss_dssp CSSCEEEEEESSS-EEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECCCEEEHHHHHHT
T ss_pred CCCcEEEEEEECC-EEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec-cEEEEEEecCCCCCHHHHHhh
Confidence 9999999998754 5788877432 3456789999999999999999999998764 568999999999999999964
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC------CccccCcccCC
Q 014484 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------KSYSTNLAFTP 152 (423)
Q Consensus 79 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~------~~~~~t~~y~a 152 (423)
.+..+++..+..++.||+.||.|||+++ ||||||||+|||++.++++||+|||+++..... ....||+.|||
T Consensus 97 -~~~~~~~~~~~~i~~qi~~gl~yLH~~~-ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~A 174 (276)
T d1uwha_ 97 -IETKFEMIKLIDIARQTAQGMDYLHAKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 174 (276)
T ss_dssp -SCCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEETTSSEEECCCCCSCC------------CCCCGGGCC
T ss_pred -ccCCCCHHHHHHHHHHHHHHHHHHhcCC-EeccccCHHHEEEcCCCCEEEccccceeeccccCCcccccccccCcccCC
Confidence 3456999999999999999999999999 999999999999999999999999999765432 23568999999
Q ss_pred ccccccC---CCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCc
Q 014484 153 PEYMRTG---RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEA 229 (423)
Q Consensus 153 PE~~~~~---~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 229 (423)
||++.+. .++.++|||||||++|||+||..||.........................+..+++++.+++.+||+.||
T Consensus 175 PE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dp 254 (276)
T d1uwha_ 175 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKR 254 (276)
T ss_dssp HHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCGGGSCTTCCHHHHHHHHHHTCSSG
T ss_pred HHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCcchhccccchHHHHHHHHHHcCCCH
Confidence 9998643 4889999999999999999999998753221111111111111111223455678899999999999999
Q ss_pred CCCCCHHHHHHHHHhhhhh
Q 014484 230 RERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 230 ~~Rps~~~vl~~l~~~~~~ 248 (423)
++|||+++++++|+.+.+.
T Consensus 255 ~~RPt~~~il~~Le~l~~~ 273 (276)
T d1uwha_ 255 DERPLFPQILASIELLARS 273 (276)
T ss_dssp GGSCCHHHHHHHHHHHHHT
T ss_pred hHCcCHHHHHHHHHHHHHc
Confidence 9999999999999988765
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=2.3e-52 Score=385.15 Aligned_cols=240 Identities=20% Similarity=0.251 Sum_probs=194.5
Q ss_pred CCCCccceeeee--c---ceeeeeecCC--ChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF--H---CHLKSSVLES--SDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~--~---~~~~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||++.+. + ..+++|.+.. .....+.|.+|+++|++++|||||+++++|..++..++|||||+||+|.+
T Consensus 37 G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~iv~Ey~~~g~L~~ 116 (299)
T d1jpaa_ 37 GEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDS 116 (299)
T ss_dssp CSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHH
T ss_pred CCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEecCCCccee
Confidence 999999999874 2 2467776644 33446689999999999999999999999999999999999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC---------ccc
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK---------SYS 145 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---------~~~ 145 (423)
++.. ..+.+++.++..++.||+.||.|||+++ |+||||||+|||++.++++||+|||+++...... ...
T Consensus 117 ~~~~-~~~~l~~~~~~~i~~qia~gl~yLH~~~-iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~ 194 (299)
T d1jpaa_ 117 FLRQ-NDGQFTVIQLVGMLRGIAAGMKYLADMN-YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGK 194 (299)
T ss_dssp HHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCC----------------------
T ss_pred eecc-ccCCCCHHHHHHHHHHHHHHHHHHhhCC-CccCccccceEEECCCCcEEECCcccceEccCCCCcceeeeccccc
Confidence 8864 3457999999999999999999999999 9999999999999999999999999998654321 134
Q ss_pred cCcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHh
Q 014484 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRC 224 (423)
Q Consensus 146 ~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 224 (423)
+|+.|||||.+.++.++.++|||||||++|||+| |..||...... .+...+........+..+++++.+++.+|
T Consensus 195 ~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~-----~~~~~i~~~~~~~~~~~~~~~l~~li~~c 269 (299)
T d1jpaa_ 195 IPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQ-----DVINAIEQDYRLPPPMDCPSALHQLMLDC 269 (299)
T ss_dssp -CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHHHHHTTCCCCCCTTCCHHHHHHHHHH
T ss_pred CCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHH-----HHHHHHHcCCCCCCCccchHHHHHHHHHH
Confidence 6889999999999999999999999999999998 78777654222 22222333344455667888999999999
Q ss_pred cccCcCCCCCHHHHHHHHHhhhhh
Q 014484 225 LQSEARERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 225 l~~dp~~Rps~~~vl~~l~~~~~~ 248 (423)
|+.||.+|||+.+|++.|+++.+.
T Consensus 270 l~~~P~~RPs~~ei~~~L~~~l~~ 293 (299)
T d1jpaa_ 270 WQKDRNHRPKFGQIVNTLDKMIRN 293 (299)
T ss_dssp TCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred cCCCHhHCcCHHHHHHHHHHHhcC
Confidence 999999999999999999988765
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-52 Score=378.05 Aligned_cols=233 Identities=20% Similarity=0.241 Sum_probs=199.9
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||++.+. +..+++|++.... .....+.+|+++++.++|||||++++++.+++..|+|||||+||+|.++
T Consensus 17 G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivmEy~~~g~L~~~ 96 (263)
T d2j4za1 17 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRE 96 (263)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHH
T ss_pred CCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEEeecCCCcHHHH
Confidence 899999999985 6778888875432 2356788999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC--CccccCcccCCc
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTNLAFTPP 153 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--~~~~~t~~y~aP 153 (423)
+.+ .+.+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++..... ....||+.|+||
T Consensus 97 l~~--~~~l~e~~~~~i~~qi~~al~~lH~~~-ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~Gt~~Y~AP 173 (263)
T d2j4za1 97 LQK--LSKFDEQRTATYITELANALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPP 173 (263)
T ss_dssp HHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCCSCSCCCCCCCEETTEEGGGCCH
T ss_pred Hhh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeeeeccccceecCCCCEeecccceeeecCCCcccccCCCCcccCH
Confidence 964 457999999999999999999999999 999999999999999999999999999876544 345789999999
Q ss_pred cccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCC
Q 014484 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERP 233 (423)
Q Consensus 154 E~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 233 (423)
|++.+..++.++|||||||++|+|++|..||......... ..+.. ....+|..+++++.+||.+||+.||++||
T Consensus 174 E~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~----~~i~~--~~~~~p~~~s~~~~~li~~~L~~dp~~R~ 247 (263)
T d2j4za1 174 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY----KRISR--VEFTFPDFVTEGARDLISRLLKHNPSQRP 247 (263)
T ss_dssp HHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHH----HHHHT--TCCCCCTTSCHHHHHHHHHHTCSSGGGSC
T ss_pred HHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHH----HHHHc--CCCCCCccCCHHHHHHHHHHccCCHhHCc
Confidence 9999999999999999999999999999998764322211 11111 12235566788999999999999999999
Q ss_pred CHHHHHHHHH
Q 014484 234 NAKSLVISLM 243 (423)
Q Consensus 234 s~~~vl~~l~ 243 (423)
|++++++|-+
T Consensus 248 t~~eil~hp~ 257 (263)
T d2j4za1 248 MLREVLEHPW 257 (263)
T ss_dssp CHHHHHTCHH
T ss_pred CHHHHHcCcC
Confidence 9999998754
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.5e-52 Score=381.77 Aligned_cols=234 Identities=17% Similarity=0.215 Sum_probs=199.1
Q ss_pred CCCCccceeeee--cceeeeeecCCCh-hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
|+||.||++.+. +..+++|++.... ...+.+.+|+++++.++|||||++++++.+++..|+|||||+||+|.+++.+
T Consensus 31 G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~~gg~L~~~~~~ 110 (293)
T d1yhwa1 31 GASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE 110 (293)
T ss_dssp SSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHH
T ss_pred CcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEecCCCcHHHHhhc
Confidence 999999999875 7889998876443 3456789999999999999999999999999999999999999999998853
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccCCcc
Q 014484 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPPE 154 (423)
Q Consensus 79 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~aPE 154 (423)
+.+++.++..++.||+.||.|||++| |+||||||+|||++.+|++||+|||+++..... ....||+.|+|||
T Consensus 111 ---~~l~~~~~~~i~~qi~~aL~yLH~~~-iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~aPE 186 (293)
T d1yhwa1 111 ---TCMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPE 186 (293)
T ss_dssp ---SCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCGGGCCHH
T ss_pred ---cCCCHHHHHHHHHHHHHHHHHHHHCC-CcccCCcHHHeEECCCCcEeeccchhheeeccccccccccccCCCccChh
Confidence 46999999999999999999999999 999999999999999999999999999876433 3456899999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCC
Q 014484 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (423)
Q Consensus 155 ~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (423)
++.+..++.++|||||||++|+|+||..||............. .........+..+++++.+||.+||+.||.+|||
T Consensus 187 ~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~---~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s 263 (293)
T d1yhwa1 187 VVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA---TNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGS 263 (293)
T ss_dssp HHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH---HHCSCCCSSGGGSCHHHHHHHHHHTCSSTTTSCC
T ss_pred hhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHH---hCCCCCCCCcccCCHHHHHHHHHHccCChhHCcC
Confidence 9999999999999999999999999999987643221111111 1111222345667889999999999999999999
Q ss_pred HHHHHHHH
Q 014484 235 AKSLVISL 242 (423)
Q Consensus 235 ~~~vl~~l 242 (423)
++|+++|-
T Consensus 264 ~~eil~Hp 271 (293)
T d1yhwa1 264 AKELLQHQ 271 (293)
T ss_dssp HHHHTTCG
T ss_pred HHHHhcCH
Confidence 99999874
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.4e-52 Score=380.14 Aligned_cols=239 Identities=20% Similarity=0.296 Sum_probs=202.4
Q ss_pred CCCCccceeeee-cceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccCC
Q 014484 2 GGRCSKFSICWF-HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80 (423)
Q Consensus 2 G~~g~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~ 80 (423)
|+||.||++.+. +..|++|++.......+.|.+|++++.+++|||||++++++.+ +..++||||+++|+|.+++....
T Consensus 24 G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-~~~~iv~Ey~~~g~L~~~~~~~~ 102 (272)
T d1qpca_ 24 GQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPS 102 (272)
T ss_dssp ETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECCTTCBHHHHTTSHH
T ss_pred CCCcEEEEEEECCCCEEEEEEEccCcCCHHHHHHHHHHHHhCCCCCEeEEEeeecc-CCeEEEEEeCCCCcHHHHHhhcC
Confidence 899999999986 4679999988777777889999999999999999999998865 56799999999999999886544
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-----CccccCcccCCccc
Q 014484 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYSTNLAFTPPEY 155 (423)
Q Consensus 81 ~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~~t~~y~aPE~ 155 (423)
+..+++..++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++..... ....||+.|+|||+
T Consensus 103 ~~~l~~~~~~~i~~qi~~gl~~lH~~~-ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~APE~ 181 (272)
T d1qpca_ 103 GIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEA 181 (272)
T ss_dssp HHTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCccchhheeeecccceeeccccceEEccCCccccccccCCcccccChHH
Confidence 456999999999999999999999999 999999999999999999999999999876543 23467899999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCCH
Q 014484 156 MRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNA 235 (423)
Q Consensus 156 ~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~ 235 (423)
+.++.++.++|||||||++|||+||..|+..... .......+........+..+++++.+|+.+||+.||++|||+
T Consensus 182 ~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~----~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~P~~Rpt~ 257 (272)
T d1qpca_ 182 INYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT----NPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTF 257 (272)
T ss_dssp HHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCC----HHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred HhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCC----HHHHHHHHHhcCCCCCcccChHHHHHHHHHHcCCCHhHCcCH
Confidence 9988999999999999999999997666544311 112222233334445566778899999999999999999999
Q ss_pred HHHHHHHHhhh
Q 014484 236 KSLVISLMSLQ 246 (423)
Q Consensus 236 ~~vl~~l~~~~ 246 (423)
++|++.|+.+-
T Consensus 258 ~ei~~~L~~~f 268 (272)
T d1qpca_ 258 DYLRSVLEDFF 268 (272)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHhhhhh
Confidence 99999887653
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-52 Score=379.48 Aligned_cols=235 Identities=15% Similarity=0.108 Sum_probs=194.0
Q ss_pred CCCCccceeeee--cceeeeeecCCCh--hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~ 77 (423)
|+||.||++.+. +..+++|++.... ...+.+.+|++++++++|||||++++++.+++..|+|||||+||+|.+++.
T Consensus 16 G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy~~gg~L~~~l~ 95 (271)
T d1nvra_ 16 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE 95 (271)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEGGGGSB
T ss_pred CcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEeccCCCcHHHHHh
Confidence 899999999985 6788888875543 235678999999999999999999999999999999999999999999996
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCC------CCccccCcccC
Q 014484 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD------GKSYSTNLAFT 151 (423)
Q Consensus 78 ~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~------~~~~~~t~~y~ 151 (423)
. .+.+++..+..++.||+.||.|||++| |+||||||+|||++.++.+||+|||+++.... .....||+.||
T Consensus 96 ~--~~~l~e~~~~~i~~qi~~al~ylH~~~-IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~~~~~~~GT~~Y~ 172 (271)
T d1nvra_ 96 P--DIGMPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 172 (271)
T ss_dssp T--TTBCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGS
T ss_pred c--CCCCCHHHHHHHHHHHHHHHHHHHHcC-CccCcccHHHEEECCCCCEEEccchhheeeccCCccccccceeeCcCcc
Confidence 3 557999999999999999999999999 99999999999999999999999999986532 23457999999
Q ss_pred CccccccCCC-CCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcC
Q 014484 152 PPEYMRTGRV-TPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (423)
Q Consensus 152 aPE~~~~~~~-~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (423)
|||++.+..+ +.++||||+||++|||+||..||........ .................+++++.+||.+||+.||+
T Consensus 173 APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~ 249 (271)
T d1nvra_ 173 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ---EYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPS 249 (271)
T ss_dssp CTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSH---HHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTT
T ss_pred CHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHH---HHHHHhcCCCCCCccccCCHHHHHHHHHHcCCChh
Confidence 9999988776 6789999999999999999999865421111 11111111222222345678899999999999999
Q ss_pred CCCCHHHHHHHH
Q 014484 231 ERPNAKSLVISL 242 (423)
Q Consensus 231 ~Rps~~~vl~~l 242 (423)
+|||++++++|-
T Consensus 250 ~R~t~~eil~hp 261 (271)
T d1nvra_ 250 ARITIPDIKKDR 261 (271)
T ss_dssp TSCCHHHHTTCT
T ss_pred HCcCHHHHhcCH
Confidence 999999998773
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=6.4e-52 Score=383.15 Aligned_cols=235 Identities=17% Similarity=0.186 Sum_probs=199.9
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||++.+. +..+|+|++.... ...+.+.+|+++|++++|||||++++++.+++..|+|||||.||+|..+
T Consensus 26 G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~~g~l~~~ 105 (309)
T d1u5ra_ 26 GSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLL 105 (309)
T ss_dssp CSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHH
T ss_pred CCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEEEecCCCchHHH
Confidence 999999999875 6778888875432 2345788999999999999999999999999999999999999999877
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCCccccCcccCCccc
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEY 155 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~t~~y~aPE~ 155 (423)
+.. ++.+++..+..++.||+.||.|||++| |+||||||+|||++.+|++||+|||+++.........||+.|||||+
T Consensus 106 ~~~--~~~l~e~~~~~i~~qi~~aL~yLH~~~-iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~GT~~Y~APE~ 182 (309)
T d1u5ra_ 106 EVH--KKPLQEVEIAAVTHGALQGLAYLHSHN-MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVGTPYWMAPEV 182 (309)
T ss_dssp HHH--TSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCCSCGGGCCHHH
T ss_pred HHh--CCCCCHHHHHHHHHHHHHHHHHHHhCC-EeccCCCcceEEECCCCCEEEeecccccccCCCCccccCccccCHHH
Confidence 653 467999999999999999999999999 99999999999999999999999999998888888899999999999
Q ss_pred ccc---CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCC
Q 014484 156 MRT---GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232 (423)
Q Consensus 156 ~~~---~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 232 (423)
+.+ +.|+.++|||||||++|||++|..||...... ..+............+..+++++.+||.+||+.||.+|
T Consensus 183 ~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~----~~~~~i~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R 258 (309)
T d1u5ra_ 183 ILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM----SALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDR 258 (309)
T ss_dssp HTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH----HHHHHHHHSCCCCCSCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred HhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHH----HHHHHHHhCCCCCCCCCCCCHHHHHHHHHHCcCChhHC
Confidence 864 45899999999999999999999998764222 11222222222223344568899999999999999999
Q ss_pred CCHHHHHHHHH
Q 014484 233 PNAKSLVISLM 243 (423)
Q Consensus 233 ps~~~vl~~l~ 243 (423)
||++++++|-.
T Consensus 259 pt~~ell~Hp~ 269 (309)
T d1u5ra_ 259 PTSEVLLKHRF 269 (309)
T ss_dssp CCHHHHTTCHH
T ss_pred cCHHHHHhCHH
Confidence 99999998754
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-51 Score=377.66 Aligned_cols=237 Identities=19% Similarity=0.252 Sum_probs=200.0
Q ss_pred CCCCccceeeee----cceeeeeecCCC--hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF----HCHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~----~~~~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||++.+. +..||+|++... ....+.|.+|+++|++++|||||++++++.. +..|+|||||+||+|.++
T Consensus 20 G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~lvmE~~~~g~L~~~ 98 (285)
T d1u59a_ 20 GNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKF 98 (285)
T ss_dssp CTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTTEEHHHH
T ss_pred ccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEEEEEeCCCCcHHHH
Confidence 999999999874 345888887543 3456789999999999999999999999865 468999999999999998
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-------CccccCc
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-------KSYSTNL 148 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-------~~~~~t~ 148 (423)
+.. ....+++.++..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....||+
T Consensus 99 l~~-~~~~l~~~~~~~i~~qi~~gL~ylH~~~-iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~ 176 (285)
T d1u59a_ 99 LVG-KREEIPVSNVAELLHQVSMGMKYLEEKN-FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPL 176 (285)
T ss_dssp HTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCG
T ss_pred hhc-cccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCcCchhheeeccCCceeeccchhhhcccccccccccccccccCc
Confidence 753 3457999999999999999999999999 999999999999999999999999999866533 2345789
Q ss_pred ccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhccc
Q 014484 149 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQS 227 (423)
Q Consensus 149 ~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 227 (423)
.|+|||++.++.++.++|||||||++|||+| |..||..... ..+...+........|..+|+++.+||.+||+.
T Consensus 177 ~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~-----~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~ 251 (285)
T d1u59a_ 177 KWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG-----PEVMAFIEQGKRMECPPECPPELYALMSDCWIY 251 (285)
T ss_dssp GGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT-----HHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCS
T ss_pred cccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCH-----HHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCC
Confidence 9999999999999999999999999999998 8888865422 122233333444556777889999999999999
Q ss_pred CcCCCCCHHHHHHHHHhhh
Q 014484 228 EARERPNAKSLVISLMSLQ 246 (423)
Q Consensus 228 dp~~Rps~~~vl~~l~~~~ 246 (423)
||++|||+.+|++.|+...
T Consensus 252 ~p~~RPs~~~i~~~L~~~~ 270 (285)
T d1u59a_ 252 KWEDRPDFLTVEQRMRACY 270 (285)
T ss_dssp SGGGSCCHHHHHHHHHHHH
T ss_pred CHhHCcCHHHHHHHHHHHH
Confidence 9999999999998887654
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.3e-52 Score=377.16 Aligned_cols=235 Identities=18% Similarity=0.213 Sum_probs=187.8
Q ss_pred CCCCccceeeee--cceeeeeecCCCh---hhHHHHHHHHHHHhcCCCCCccceEeEEEe--CCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYE--ADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||++.+. +..+++|++.... ...+.+.+|++++++++|||||++++++.+ ++.+|+|||||+||+|.+
T Consensus 15 G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~ivmEy~~~g~L~~ 94 (269)
T d2java1 15 GSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS 94 (269)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEEEECCTTEEHHH
T ss_pred CCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEEEecCCCCcHHH
Confidence 999999999885 6788898875543 345678899999999999999999999965 456899999999999999
Q ss_pred hhccC--CCCCCCHHHHHHHHHHHHHHHHHHHcCC----CeeeccCCCCCeeecCCCCeEEccccccccCCCC----Ccc
Q 014484 75 HLFHW--ETQPMKWAMRLRVALYLAQALEYCSSKG----RALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSY 144 (423)
Q Consensus 75 ~i~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~----~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~ 144 (423)
++.+. .++.+++..++.++.||+.||.|||+++ +|+||||||+|||++.++.+||+|||+++..... ...
T Consensus 95 ~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~~~~~ 174 (269)
T d2java1 95 VITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAF 174 (269)
T ss_dssp HHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHHC----------
T ss_pred HHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceeecccCCCccccC
Confidence 98632 3567999999999999999999999854 3999999999999999999999999999876543 345
Q ss_pred ccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHh
Q 014484 145 STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRC 224 (423)
Q Consensus 145 ~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 224 (423)
.||+.|||||++.+..++.++|||||||++|||+||..||........ ...+........+..+++++.+||.+|
T Consensus 175 ~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~-----~~~i~~~~~~~~~~~~s~~l~~li~~~ 249 (269)
T d2java1 175 VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL-----AGKIREGKFRRIPYRYSDELNEIITRM 249 (269)
T ss_dssp -CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-----HHHHHHTCCCCCCTTSCHHHHHHHHHH
T ss_pred CCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHH-----HHHHHcCCCCCCCcccCHHHHHHHHHH
Confidence 789999999999999999999999999999999999999876432221 111222222345667788999999999
Q ss_pred cccCcCCCCCHHHHHHH
Q 014484 225 LQSEARERPNAKSLVIS 241 (423)
Q Consensus 225 l~~dp~~Rps~~~vl~~ 241 (423)
|+.||.+|||++++++|
T Consensus 250 L~~dp~~Rps~~ell~h 266 (269)
T d2java1 250 LNLKDYHRPSVEEILEN 266 (269)
T ss_dssp TCSSGGGSCCHHHHHTS
T ss_pred cCCChhHCcCHHHHHhC
Confidence 99999999999999876
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-51 Score=374.82 Aligned_cols=235 Identities=18% Similarity=0.240 Sum_probs=196.0
Q ss_pred CCCCccceeeee----cceeeeeecCCCh---hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF----HCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~----~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||++.+. +..+++|++.... ...+.|.+|+++|++++|||||+++++|.. +..++||||+++|+|.+
T Consensus 18 G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~g~L~~ 96 (277)
T d1xbba_ 18 GNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNK 96 (277)
T ss_dssp CSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCTTEEHHH
T ss_pred CCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCCCCcHHH
Confidence 999999999875 3457888875432 235679999999999999999999999965 45789999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-------CccccC
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-------KSYSTN 147 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-------~~~~~t 147 (423)
++.. ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....||
T Consensus 97 ~l~~--~~~l~~~~~~~i~~qi~~gl~ylH~~~-iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt 173 (277)
T d1xbba_ 97 YLQQ--NRHVKDKNIIELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 173 (277)
T ss_dssp HHHH--CTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----CCC
T ss_pred HHhh--ccCCCHHHHHHHHHHHHHHHhhHHhCC-cccCCCcchhhcccccCcccccchhhhhhccccccccccccccCCC
Confidence 9964 457999999999999999999999999 999999999999999999999999999865533 224578
Q ss_pred cccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcc
Q 014484 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (423)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (423)
+.|+|||.+.+..++.++|||||||++|||+| |..||..... ..+...+........|..+|+++.+|+.+||+
T Consensus 174 ~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~-----~~~~~~i~~~~~~~~p~~~~~~~~~li~~cl~ 248 (277)
T d1xbba_ 174 VKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG-----SEVTAMLEKGERMGCPAGCPREMYDLMNLCWT 248 (277)
T ss_dssp GGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCH-----HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTC
T ss_pred ceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCH-----HHHHHHHHcCCCCCCCcccCHHHHHHHHHHcC
Confidence 99999999999999999999999999999998 7888775422 22223333334455667788999999999999
Q ss_pred cCcCCCCCHHHHHHHHHhh
Q 014484 227 SEARERPNAKSLVISLMSL 245 (423)
Q Consensus 227 ~dp~~Rps~~~vl~~l~~~ 245 (423)
.||++|||+++|+..|+..
T Consensus 249 ~dp~~RPs~~~i~~~L~~~ 267 (277)
T d1xbba_ 249 YDVENRPGFAAVELRLRNY 267 (277)
T ss_dssp SSTTTSCCHHHHHHHHHHH
T ss_pred CCHhHCcCHHHHHHHhhCH
Confidence 9999999999998877654
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.7e-52 Score=379.05 Aligned_cols=235 Identities=15% Similarity=0.194 Sum_probs=197.1
Q ss_pred CCCCccceeeee--cceeeeeecCCC-hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS-DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
|+||.||++.+. +..+++|++... ....+.+.+|+++|++++|||||++++++.+++..++|||||+||+|.+++.+
T Consensus 23 G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~~~g~L~~~~~~ 102 (288)
T d2jfla1 23 GAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE 102 (288)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHH
T ss_pred CCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecCCCCcHHHHHHh
Confidence 899999999985 677888887554 34567889999999999999999999999999999999999999999998754
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCC----CCccccCcccCCcc
Q 014484 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD----GKSYSTNLAFTPPE 154 (423)
Q Consensus 79 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~----~~~~~~t~~y~aPE 154 (423)
.++.+++.++..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++.... .....||+.|+|||
T Consensus 103 -~~~~l~e~~~~~i~~qi~~gL~ylH~~~-ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~~~~~~~Gt~~y~APE 180 (288)
T d2jfla1 103 -LERPLTESQIQVVCKQTLDALNYLHDNK-IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPE 180 (288)
T ss_dssp -HTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECHHHHHHHTCCCSCCTTCCHH
T ss_pred -cCCCCCHHHHHHHHHHHHHHHHHHHHCC-EEEeecChhheeECCCCCEEEEechhhhccCCCcccccccccccccCCHH
Confidence 3457999999999999999999999999 99999999999999999999999999875543 24567999999999
Q ss_pred ccc-----cCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccc-cccCCCChhHHHHHHHHHHHhcccC
Q 014484 155 YMR-----TGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS-ALEGHFSNDEGTELVRLASRCLQSE 228 (423)
Q Consensus 155 ~~~-----~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~d 228 (423)
++. +..++.++|||||||++|||+||..||....... .+...... ......+..+++++.+||.+||+.|
T Consensus 181 ~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~----~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~d 256 (288)
T d2jfla1 181 VVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMR----VLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKN 256 (288)
T ss_dssp HHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGG----HHHHHHHSCCCCCSSGGGSCHHHHHHHHHHSCSS
T ss_pred HHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHH----HHHHHHcCCCCCCCccccCCHHHHHHHHHHccCC
Confidence 984 4558999999999999999999999987642211 11122211 1122334567889999999999999
Q ss_pred cCCCCCHHHHHHHH
Q 014484 229 ARERPNAKSLVISL 242 (423)
Q Consensus 229 p~~Rps~~~vl~~l 242 (423)
|++|||++|+++|-
T Consensus 257 p~~R~t~~ell~hp 270 (288)
T d2jfla1 257 VDARWTTSQLLQHP 270 (288)
T ss_dssp TTTSCCHHHHTTSG
T ss_pred hhHCcCHHHHhcCc
Confidence 99999999998873
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.7e-51 Score=373.89 Aligned_cols=241 Identities=19% Similarity=0.254 Sum_probs=199.0
Q ss_pred CCCCccceeeeec------ceeeeeecCCC--hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHH
Q 014484 2 GGRCSKFSICWFH------CHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLA 73 (423)
Q Consensus 2 G~~g~v~~~~~~~------~~~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 73 (423)
||||.||++.+.. ..+++|.+... ......|.+|++++++++|||||++++++.+.+..++||||+.+++|.
T Consensus 18 G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~v~e~~~~~~l~ 97 (283)
T d1mqba_ 18 GEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALD 97 (283)
T ss_dssp CSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTEEHH
T ss_pred CCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEEEEEecccCcch
Confidence 9999999999863 35777776443 334567899999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-------Ccccc
Q 014484 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-------KSYST 146 (423)
Q Consensus 74 ~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-------~~~~~ 146 (423)
+++.. ....+++.++..++.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++..... ....|
T Consensus 98 ~~~~~-~~~~~~~~~~~~i~~~i~~gl~~lH~~~-iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~g 175 (283)
T d1mqba_ 98 KFLRE-KDGEFSVLQLVGMLRGIAAGMKYLANMN-YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKI 175 (283)
T ss_dssp HHHHH-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCCCC-----------------CC
T ss_pred hhhhc-ccccccHHHHHHHHHHHHHhhhhccccc-cccCccccceEEECCCCeEEEcccchhhcccCCCccceEeccCCC
Confidence 98864 4467999999999999999999999999 999999999999999999999999999865432 12357
Q ss_pred CcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcc
Q 014484 147 NLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (423)
Q Consensus 147 t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (423)
|+.|+|||++.++.++.++|||||||++|||++|..|+.... ....+...+........+..++.++.+++.+||+
T Consensus 176 t~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~----~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~ 251 (283)
T d1mqba_ 176 PIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWEL----SNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQ 251 (283)
T ss_dssp CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC----CHHHHHHHHHTTCCCCCCTTCBHHHHHHHHHHTC
T ss_pred CccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccC----CHHHHHHHHhccCCCCCchhhHHHHHHHHHHHCc
Confidence 899999999999999999999999999999999776665432 1122333334444556667788999999999999
Q ss_pred cCcCCCCCHHHHHHHHHhhhhh
Q 014484 227 SEARERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 227 ~dp~~Rps~~~vl~~l~~~~~~ 248 (423)
.||++|||+.+|++.|+.+.+.
T Consensus 252 ~~p~~RPt~~eil~~L~~l~~~ 273 (283)
T d1mqba_ 252 QERARRPKFADIVSILDKLIRA 273 (283)
T ss_dssp SSTTTSCCHHHHHHHHHHHHHS
T ss_pred CCHhHCcCHHHHHHHHHHHhhC
Confidence 9999999999999999988765
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3e-51 Score=369.31 Aligned_cols=236 Identities=22% Similarity=0.328 Sum_probs=203.7
Q ss_pred CCCCccceeeee-cceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccCC
Q 014484 2 GGRCSKFSICWF-HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80 (423)
Q Consensus 2 G~~g~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~ 80 (423)
|+||.||++.+. +..+++|.+.......+.|.+|++++.+++||||++++++|.+++..++||||+++|+|.+++.. .
T Consensus 15 G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~~g~l~~~~~~-~ 93 (258)
T d1k2pa_ 15 GQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE-M 93 (258)
T ss_dssp ETTEEEEEEEETTTEEEEEEEEESSSSCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCTTEEHHHHHHS-G
T ss_pred CCCeEEEEEEECCCCEEEEEEECcCcCCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccCCCcHHHhhhc-c
Confidence 899999999986 55789999887777778999999999999999999999999999999999999999999999754 3
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-----CccccCcccCCccc
Q 014484 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYSTNLAFTPPEY 155 (423)
Q Consensus 81 ~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~~t~~y~aPE~ 155 (423)
...+++..+.+++.|++.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....+|+.|+|||.
T Consensus 94 ~~~~~~~~~~~i~~qi~~gl~~LH~~~-iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~t~~y~aPE~ 172 (258)
T d1k2pa_ 94 RHRFQTQQLLEMCKDVCEAMEYLESKQ-FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEV 172 (258)
T ss_dssp GGCCCHHHHHHHHHHHHHHHHHHHHTT-BCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCCCCCSCCCGGGCCHHH
T ss_pred ccCCcHHHHHHHHHHHHHHHHHHhhcC-cccccccceeEEEcCCCcEEECcchhheeccCCCceeecccCCCCCcCCcHH
Confidence 456899999999999999999999999 999999999999999999999999999755432 23457899999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCC
Q 014484 156 MRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234 (423)
Q Consensus 156 ~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 234 (423)
+.+..++.++|||||||++|||+| |..||....... +...+........|..+++++.+||.+||+.||++|||
T Consensus 173 ~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~-----~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt 247 (258)
T d1k2pa_ 173 LMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE-----TAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPT 247 (258)
T ss_dssp HHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH-----HHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCC
T ss_pred hcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHH-----HHHHHHhCCCCCCcccccHHHHHHHHHHccCCHhHCcC
Confidence 999999999999999999999998 777776543222 22222233344566677889999999999999999999
Q ss_pred HHHHHHHHHh
Q 014484 235 AKSLVISLMS 244 (423)
Q Consensus 235 ~~~vl~~l~~ 244 (423)
+++++++|..
T Consensus 248 ~~eil~~L~d 257 (258)
T d1k2pa_ 248 FKILLSNILD 257 (258)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHhhC
Confidence 9999999864
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.8e-51 Score=370.26 Aligned_cols=235 Identities=17% Similarity=0.191 Sum_probs=191.0
Q ss_pred CCCCccceeeee--cceeeeeecCCC---hhhHHHHHHHHHHHhcCCCCCccceEeEEEe----CCceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS---DLGETLNLEEAKAVGNLRSERLANLIGCCYE----ADERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~~lv~e~~~~~~L 72 (423)
|+||.||++.+. +..+++|.+... ....+.+.+|+++|++++|||||+++++|.+ +..+|+|||||+||+|
T Consensus 20 G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivmE~~~~g~L 99 (270)
T d1t4ha_ 20 GSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTL 99 (270)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBH
T ss_pred CcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEEeCCCCCcH
Confidence 999999999985 567888876543 3345678999999999999999999999976 3457899999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCC-eeeccCCCCCeeec-CCCCeEEccccccccCCCC--CccccCc
Q 014484 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGR-ALYHDLNAYRILFD-KDGNPRLSSFGLMKNSRDG--KSYSTNL 148 (423)
Q Consensus 73 ~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~-iiH~dlkp~Nill~-~~~~~kl~Dfg~~~~~~~~--~~~~~t~ 148 (423)
.+++.+ .+.+++..+..++.||+.||.|||++++ |+||||||+|||++ .++.+||+|||+++..... .+..||+
T Consensus 100 ~~~l~~--~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~~~~~~~~GT~ 177 (270)
T d1t4ha_ 100 KTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTP 177 (270)
T ss_dssp HHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBEESCSSC
T ss_pred HHHHhc--cccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEEeecCcceeccCCccCCcccCc
Confidence 999964 4579999999999999999999999753 99999999999996 5789999999999865543 3467999
Q ss_pred ccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccC
Q 014484 149 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSE 228 (423)
Q Consensus 149 ~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 228 (423)
.|||||++.+ +++.++|||||||++|||++|..||.......... ..+........++...++++.++|.+||+.|
T Consensus 178 ~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~---~~i~~~~~~~~~~~~~~~~~~~li~~~l~~d 253 (270)
T d1t4ha_ 178 EFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIY---RRVTSGVKPASFDKVAIPEVKEIIEGCIRQN 253 (270)
T ss_dssp CCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHH---HHHTTTCCCGGGGGCCCHHHHHHHHHHSCSS
T ss_pred cccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHH---HHHHcCCCCcccCccCCHHHHHHHHHHccCC
Confidence 9999999874 69999999999999999999999986532111111 1111111112233445778999999999999
Q ss_pred cCCCCCHHHHHHHH
Q 014484 229 ARERPNAKSLVISL 242 (423)
Q Consensus 229 p~~Rps~~~vl~~l 242 (423)
|++|||++|+++|-
T Consensus 254 p~~R~s~~ell~Hp 267 (270)
T d1t4ha_ 254 KDERYSIKDLLNHA 267 (270)
T ss_dssp GGGSCCHHHHHTSG
T ss_pred HhHCcCHHHHhCCc
Confidence 99999999999873
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.2e-51 Score=382.35 Aligned_cols=237 Identities=20% Similarity=0.294 Sum_probs=197.0
Q ss_pred CCCCccceeeeec-------ceeeeeecCCC--hhhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCCC
Q 014484 2 GGRCSKFSICWFH-------CHLKSSVLESS--DLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNET 71 (423)
Q Consensus 2 G~~g~v~~~~~~~-------~~~~~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 71 (423)
|+||.||++.+.+ ..+++|.+... ......+.+|+.++.++ +|||||+++++|.+.+..++|||||+||+
T Consensus 48 G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~ 127 (325)
T d1rjba_ 48 GAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGD 127 (325)
T ss_dssp CSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCB
T ss_pred CCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCeEEEEEEcCCCCc
Confidence 9999999999863 24677766433 33456789999999998 89999999999999999999999999999
Q ss_pred HHhhhccCC---------------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEc
Q 014484 72 LAKHLFHWE---------------------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLS 130 (423)
Q Consensus 72 L~~~i~~~~---------------------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~ 130 (423)
|.+++.... ...+++..++.++.||+.||.|||+++ ||||||||+|||++.++++||+
T Consensus 128 L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~-IiHRDlKp~Nill~~~~~~Kl~ 206 (325)
T d1rjba_ 128 LLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS-CVHRDLAARNVLVTHGKVVKIC 206 (325)
T ss_dssp HHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT-EEETTCSGGGEEEETTTEEEEC
T ss_pred HHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCchhccccccCCeEEEe
Confidence 999996432 135899999999999999999999999 9999999999999999999999
Q ss_pred cccccccCCCCC------ccccCcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccc
Q 014484 131 SFGLMKNSRDGK------SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDS 203 (423)
Q Consensus 131 Dfg~~~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~ 203 (423)
|||+++...... ...||+.|||||++.++.++.++|||||||++|||+| |..||.+... ...+...+..
T Consensus 207 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~----~~~~~~~~~~ 282 (325)
T d1rjba_ 207 DFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPV----DANFYKLIQN 282 (325)
T ss_dssp CCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC----SHHHHHHHHT
T ss_pred eccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCH----HHHHHHHHhc
Confidence 999998654332 3446899999999999999999999999999999998 7888765321 1223333444
Q ss_pred cccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 204 ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 204 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
......|..+++++.+||.+||+.||++|||+++|+++|.
T Consensus 283 ~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~ 322 (325)
T d1rjba_ 283 GFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 322 (325)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence 4455566778899999999999999999999999999985
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=5.7e-51 Score=376.67 Aligned_cols=235 Identities=12% Similarity=0.133 Sum_probs=183.9
Q ss_pred CCCCccceeeee--cceeeeeecCCCh--hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~ 77 (423)
|+||.||++.+. +..+++|++.... .....+.+|+++|+.++|||||++++++.+++..|+|||||+||+|.+++.
T Consensus 20 G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE~~~gg~L~~~l~ 99 (307)
T d1a06a_ 20 GAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIV 99 (307)
T ss_dssp GGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHH
T ss_pred ccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcHHHhhh
Confidence 899999999885 6778998876543 234567899999999999999999999999999999999999999999996
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeec---CCCCeEEccccccccCCCC---CccccCcccC
Q 014484 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFD---KDGNPRLSSFGLMKNSRDG---KSYSTNLAFT 151 (423)
Q Consensus 78 ~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~---~~~~~kl~Dfg~~~~~~~~---~~~~~t~~y~ 151 (423)
+ .+.+++..+..++.||+.||.|||+++ |+||||||+||++. .++.+||+|||+++..... .+..||+.||
T Consensus 100 ~--~~~l~e~~~~~~~~qi~~al~ylH~~~-iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~GT~~y~ 176 (307)
T d1a06a_ 100 E--KGFYTERDASRLIFQVLDAVKYLHDLG-IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYV 176 (307)
T ss_dssp T--CSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESSSSTTCCEEECCC------------------CTTS
T ss_pred c--ccCCCHHHHHHHHHHHHHHHHhhhhce-eeeEEecccceeecccCCCceEEEeccceeEEccCCCeeeeeeeCcccc
Confidence 4 567999999999999999999999999 99999999999994 5789999999999866543 3457999999
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCC
Q 014484 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARE 231 (423)
Q Consensus 152 aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (423)
|||++.+..++.++|||||||++|+|++|..||............. ..........+..+|+++.+||.+||++||++
T Consensus 177 APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~--~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~ 254 (307)
T d1a06a_ 177 APEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQIL--KAEYEFDSPYWDDISDSAKDFIRHLMEKDPEK 254 (307)
T ss_dssp CHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH--TTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGG
T ss_pred CcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHh--ccCCCCCCccccCCCHHHHHHHHHHccCCHhH
Confidence 9999999999999999999999999999999987653222211111 11112222334567889999999999999999
Q ss_pred CCCHHHHHHH
Q 014484 232 RPNAKSLVIS 241 (423)
Q Consensus 232 Rps~~~vl~~ 241 (423)
|||++|+++|
T Consensus 255 R~s~~eil~h 264 (307)
T d1a06a_ 255 RFTCEQALQH 264 (307)
T ss_dssp SCCHHHHHHS
T ss_pred CcCHHHHhcC
Confidence 9999999987
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.2e-51 Score=374.69 Aligned_cols=233 Identities=17% Similarity=0.166 Sum_probs=197.5
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||++.+. +..+++|++.... .....+.+|++++++++|||||++++++.+++..|+|||||+||+|.++
T Consensus 19 G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy~~gg~L~~~ 98 (288)
T d1uu3a_ 19 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKY 98 (288)
T ss_dssp CSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEECCCTTEEHHHH
T ss_pred CCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEEEccCCCCHHHh
Confidence 999999999985 7788999875432 2346789999999999999999999999999999999999999999998
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC------CccccCcc
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG------KSYSTNLA 149 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~------~~~~~t~~ 149 (423)
+.. .+.+++..+..++.|++.||.|||+++ |+||||||+|||++.+|.+||+|||+++..... .+..||+.
T Consensus 99 ~~~--~~~l~e~~~~~~~~qi~~al~ylH~~~-iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~GT~~ 175 (288)
T d1uu3a_ 99 IRK--IGSFDETCTRFYTAEIVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 175 (288)
T ss_dssp HHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECC----------CCCCGG
T ss_pred hhc--cCCCCHHHHHHHHHHHHHHHHhhcccc-EEcCcCCccccccCCCceEEecccccceecccCCcccccccccCCcc
Confidence 864 457999999999999999999999999 999999999999999999999999999866432 23569999
Q ss_pred cCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCc
Q 014484 150 FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEA 229 (423)
Q Consensus 150 y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 229 (423)
|+|||++.+..++.++|||||||++|+|++|..||......... ..+.. ....++..+++++.+||.+||+.||
T Consensus 176 Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~----~~i~~--~~~~~p~~~s~~~~~li~~~L~~dP 249 (288)
T d1uu3a_ 176 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF----QKIIK--LEYDFPEKFFPKARDLVEKLLVLDA 249 (288)
T ss_dssp GCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHT--TCCCCCTTCCHHHHHHHHTTSCSSG
T ss_pred ccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHH----HHHHc--CCCCCCccCCHHHHHHHHHHccCCH
Confidence 99999999999999999999999999999999998764322211 11111 1223566778899999999999999
Q ss_pred CCCCCHHHHHHHHH
Q 014484 230 RERPNAKSLVISLM 243 (423)
Q Consensus 230 ~~Rps~~~vl~~l~ 243 (423)
.+|||++|++.+.+
T Consensus 250 ~~R~t~~e~~~~~~ 263 (288)
T d1uu3a_ 250 TKRLGCEEMEGYGP 263 (288)
T ss_dssp GGSTTSGGGTCHHH
T ss_pred hHCcCHHHHcCCHH
Confidence 99999999876643
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.4e-51 Score=380.86 Aligned_cols=239 Identities=16% Similarity=0.248 Sum_probs=194.1
Q ss_pred CCCCccceeeee--cceeeeeecCCC--hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~ 77 (423)
|+||.||++.+. +..+++|++... ......+.+|+.+|+.++|||||+++++|.+.+..|+||||++||+|.+++.
T Consensus 17 G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmEy~~gg~L~~~l~ 96 (322)
T d1s9ja_ 17 GNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK 96 (322)
T ss_dssp CSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEECCTTEEHHHHHH
T ss_pred CCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCCcHHHHHh
Confidence 999999999985 677888887543 3345688999999999999999999999999999999999999999999996
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHc-CCCeeeccCCCCCeeecCCCCeEEccccccccCCC--CCccccCcccCCcc
Q 014484 78 HWETQPMKWAMRLRVALYLAQALEYCSS-KGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD--GKSYSTNLAFTPPE 154 (423)
Q Consensus 78 ~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~--~~~~~~t~~y~aPE 154 (423)
+ .+.+++..+..++.|++.||.|||+ ++ |+||||||+|||++.+|++||+|||+|+.... ..+..||+.|+|||
T Consensus 97 ~--~~~l~~~~~~~~~~qil~aL~yLH~~~~-IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~~~GT~~Y~APE 173 (322)
T d1s9ja_ 97 K--AGRIPEQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPE 173 (322)
T ss_dssp H--HSSCCHHHHHHHHHHHHHHHHHHHHHHC-CCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHTC---CCSSCCCCHH
T ss_pred h--cCCCCHHHHHHHHHHHHHHHHHHHHhCC-EEccccCHHHeeECCCCCEEEeeCCCccccCCCccccccCCccccCch
Confidence 4 4569999999999999999999997 48 99999999999999999999999999985532 34568999999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchh----------------------------------hhh
Q 014484 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNF----------------------------------LLL 200 (423)
Q Consensus 155 ~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~----------------------------------~~~ 200 (423)
++.+..|+.++||||+||++|||++|+.||............. ...
T Consensus 174 vl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (322)
T d1s9ja_ 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFEL 253 (322)
T ss_dssp HHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC------------------------------CCCCHHHH
T ss_pred HHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccccccccccccccccchhHHHH
Confidence 9999999999999999999999999999986532111100000 000
Q ss_pred c---cccccCCCC-hhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 201 M---DSALEGHFS-NDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 201 ~---~~~~~~~~~-~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
. ........+ ...+.++.+||.+||+.||.+|||++|+++|-.
T Consensus 254 ~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf 300 (322)
T d1s9ja_ 254 LDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAF 300 (322)
T ss_dssp HHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred HhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCHh
Confidence 0 000001111 234678999999999999999999999999844
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4e-51 Score=369.09 Aligned_cols=240 Identities=21% Similarity=0.300 Sum_probs=197.6
Q ss_pred CCCCccceeeeecceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEe-CCceeEEEecCCCCCHHhhhccCC
Q 014484 2 GGRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYE-ADERLLVAEFMPNETLAKHLFHWE 80 (423)
Q Consensus 2 G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~~~~~~L~~~i~~~~ 80 (423)
|+||.||++.+.+..+++|++..+. ..+.|.+|++++++++||||++++++|.+ .+.+++||||+++|+|.+++....
T Consensus 18 G~fg~Vy~~~~~~~~vAvK~i~~~~-~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~~~g~L~~~l~~~~ 96 (262)
T d1byga_ 18 GEFGDVMLGDYRGNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRG 96 (262)
T ss_dssp CSSCEEEEEEETTEEEEEEECCCCC---HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHH
T ss_pred CCCeEEEEEEECCeEEEEEEECcHH-HHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEeccCCCCHHHHHHhcC
Confidence 9999999999999999999986654 45789999999999999999999999965 456899999999999999996543
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-CccccCcccCCccccccC
Q 014484 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSYSTNLAFTPPEYMRTG 159 (423)
Q Consensus 81 ~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~~t~~y~aPE~~~~~ 159 (423)
...+++..++.|+.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++..... ....+|..|+|||++.+.
T Consensus 97 ~~~l~~~~~~~i~~~i~~al~ylH~~~-ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~~~~~~~~~y~aPE~l~~~ 175 (262)
T d1byga_ 97 RSVLGGDCLLKFSLDVCEAMEYLEGNN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREK 175 (262)
T ss_dssp HHHCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTSCEEECCCCC------------CCTTTSCHHHHHHC
T ss_pred CCCCCHHHHHHHHHHHHhhccccccCc-eeccccchHhheecCCCCEeecccccceecCCCCccccccccCCChHHHhCC
Confidence 446899999999999999999999999 999999999999999999999999999875543 345678899999999999
Q ss_pred CCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHH
Q 014484 160 RVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238 (423)
Q Consensus 160 ~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v 238 (423)
.++.++|||||||++|||+| |.+|+... ....+...+......+++..+++++.++|.+||+.||.+|||+.++
T Consensus 176 ~~t~~sDIwSfG~il~el~t~~~~p~~~~-----~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l 250 (262)
T d1byga_ 176 KFSTKSDVWSFGILLWEIYSFGRVPYPRI-----PLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQL 250 (262)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTSCCSCTTS-----CGGGHHHHHTTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CCChHHHHHhHHHHHHHHHHCCCCCCCCC-----CHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcccCHhHCcCHHHH
Confidence 99999999999999999998 56555442 2223333334445556777788999999999999999999999999
Q ss_pred HHHHHhhhhh
Q 014484 239 VISLMSLQKE 248 (423)
Q Consensus 239 l~~l~~~~~~ 248 (423)
+++|+.++..
T Consensus 251 ~~~L~~i~~~ 260 (262)
T d1byga_ 251 REQLEHIKTH 260 (262)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhC
Confidence 9999987643
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.1e-51 Score=371.08 Aligned_cols=240 Identities=22% Similarity=0.310 Sum_probs=199.6
Q ss_pred CCCCccceeeee-cceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccCC
Q 014484 2 GGRCSKFSICWF-HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80 (423)
Q Consensus 2 G~~g~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~ 80 (423)
|+||.||++.+. +..+++|++.......+.|.+|+.++.+++|||||+++++|.+ +..++||||+++|+|..++....
T Consensus 28 G~fg~Vy~~~~~~~~~vAiK~l~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~-~~~~lv~Ey~~~g~l~~~~~~~~ 106 (285)
T d1fmka3 28 GCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGET 106 (285)
T ss_dssp CSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTCBHHHHHSHHH
T ss_pred CCCeEEEEEEECCCCEEEEEEECcccCCHHHHHHHHHHHHhcccCCEeEEEEEEec-CCeEEEEEecCCCchhhhhhhcc
Confidence 999999999885 4568999988777778899999999999999999999999854 56899999999999999987545
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-----CccccCcccCCccc
Q 014484 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYSTNLAFTPPEY 155 (423)
Q Consensus 81 ~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~~t~~y~aPE~ 155 (423)
.+.+++.+++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....||+.|+|||+
T Consensus 107 ~~~l~~~~~~~i~~~i~~gl~~LH~~~-ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~ 185 (285)
T d1fmka3 107 GKYLRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 185 (285)
T ss_dssp HTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCCTTC--------------CCGGGSCHHH
T ss_pred cccchHHHHHHHHHHHHHHHHHHhhhh-eecccccceEEEECCCCcEEEcccchhhhccCCCceeeccccccccccChHH
Confidence 567999999999999999999999999 999999999999999999999999999865432 23467899999999
Q ss_pred cccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCCCH
Q 014484 156 MRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNA 235 (423)
Q Consensus 156 ~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~ 235 (423)
+.++.++.++|||||||++|||++|..|+...... ......+........+..+++++.++|.+||+.||++|||+
T Consensus 186 ~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~----~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~ 261 (285)
T d1fmka3 186 ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN----REVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTF 261 (285)
T ss_dssp HHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH----HHHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCH
T ss_pred HhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCH----HHHHHHHHhcCCCCCCcccCHHHHHHHHHHcccCHhHCcCH
Confidence 99999999999999999999999977665543211 11222222333445667788899999999999999999999
Q ss_pred HHHHHHHHhhhh
Q 014484 236 KSLVISLMSLQK 247 (423)
Q Consensus 236 ~~vl~~l~~~~~ 247 (423)
++|+..|+....
T Consensus 262 ~~i~~~L~~~~~ 273 (285)
T d1fmka3 262 EYLQAFLEDYFT 273 (285)
T ss_dssp HHHHHHHHTTTS
T ss_pred HHHHHHHhhhhc
Confidence 999988876543
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=3.9e-50 Score=377.65 Aligned_cols=237 Identities=16% Similarity=0.133 Sum_probs=199.8
Q ss_pred CCCCccceeeee--cceeeeeecCCCh-hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
|+||.||++.+. +..+++|++.... .....+.+|+++|++++|||||+++++|.+++.+|+|||||+||+|.+++..
T Consensus 40 G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~L~~~~~~ 119 (352)
T d1koba_ 40 GAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAA 119 (352)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCCBHHHHTTC
T ss_pred CCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCChHHHHHHh
Confidence 899999999984 7888999876544 4466788999999999999999999999999999999999999999988754
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeec--CCCCeEEccccccccCCCCC---ccccCcccCCc
Q 014484 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFD--KDGNPRLSSFGLMKNSRDGK---SYSTNLAFTPP 153 (423)
Q Consensus 79 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~--~~~~~kl~Dfg~~~~~~~~~---~~~~t~~y~aP 153 (423)
.+.++++.+++.|+.||+.||.|||++| |+||||||+|||++ .++.+||+|||+++...... ...||+.|+||
T Consensus 120 -~~~~l~e~~~~~i~~qi~~aL~ylH~~~-iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~~~~~~gt~~y~aP 197 (352)
T d1koba_ 120 -EDYKMSEAEVINYMRQACEGLKHMHEHS-IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAP 197 (352)
T ss_dssp -TTCCBCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEEEECSSGGGCCH
T ss_pred -cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecccccccccccccCCCeEEEeecccceecCCCCceeeccCcccccCH
Confidence 3457999999999999999999999999 99999999999997 57899999999998776543 35789999999
Q ss_pred cccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCC
Q 014484 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERP 233 (423)
Q Consensus 154 E~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 233 (423)
|++.+..++.++|||||||++|+|+||..||.+.......... ..............+++++.+||.+||++||.+||
T Consensus 198 E~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i--~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~ 275 (352)
T d1koba_ 198 EIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNV--KRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRL 275 (352)
T ss_dssp HHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHH--HHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSC
T ss_pred HHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHH--HhCCCCCCcccccCCCHHHHHHHHHHccCChhHCc
Confidence 9999999999999999999999999999998765322211111 11111222333456788999999999999999999
Q ss_pred CHHHHHHHH
Q 014484 234 NAKSLVISL 242 (423)
Q Consensus 234 s~~~vl~~l 242 (423)
|++++++|-
T Consensus 276 s~~eil~Hp 284 (352)
T d1koba_ 276 TVHDALEHP 284 (352)
T ss_dssp CHHHHHTST
T ss_pred CHHHHhcCH
Confidence 999999873
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=5e-50 Score=376.59 Aligned_cols=235 Identities=15% Similarity=0.148 Sum_probs=198.4
Q ss_pred CCCCccceeeee--cceeeeeecCCCh-hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
|+||.||++.+. +..+++|++.... ...+.+.+|+++|++++|||||++++++.+++.+|+|||||+||+|.+++.+
T Consensus 37 G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~L~~~l~~ 116 (350)
T d1koaa2 37 GAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVAD 116 (350)
T ss_dssp ETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTC
T ss_pred CcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCCCHHHHHHh
Confidence 899999999985 7788998876554 3467788999999999999999999999999999999999999999999854
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeec--CCCCeEEccccccccCCCCC---ccccCcccCCc
Q 014484 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFD--KDGNPRLSSFGLMKNSRDGK---SYSTNLAFTPP 153 (423)
Q Consensus 79 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~--~~~~~kl~Dfg~~~~~~~~~---~~~~t~~y~aP 153 (423)
..+.+++..+..++.||+.||.|||++| |+||||||+|||++ .++.+||+|||+++...... ...||+.||||
T Consensus 117 -~~~~l~e~~~~~i~~qi~~aL~ylH~~~-iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~~~~gT~~Y~aP 194 (350)
T d1koaa2 117 -EHNKMSEDEAVEYMRQVCKGLCHMHENN-YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAP 194 (350)
T ss_dssp -TTSCBCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSCEEEECSCTTTCCH
T ss_pred -hcCCCCHHHHHHHHHHHHHHHHHHHhcC-CeeeeechhHeeeccCCCCeEEEeecchheecccccccceecCcccccCH
Confidence 3456999999999999999999999999 99999999999995 45789999999998766543 35789999999
Q ss_pred cccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccc--cccCCCChhHHHHHHHHHHHhcccCcCC
Q 014484 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS--ALEGHFSNDEGTELVRLASRCLQSEARE 231 (423)
Q Consensus 154 E~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (423)
|++.+..++.++|||||||++|+|++|..||.+...... +..+... .........+++++.+||.+||+.||++
T Consensus 195 Ev~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~ 270 (350)
T d1koaa2 195 EVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDET----LRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNT 270 (350)
T ss_dssp HHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHTCCCSCCGGGGGCCHHHHHHHHHHCCSSGGG
T ss_pred HHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHH----HHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhH
Confidence 999999999999999999999999999999876432211 1111111 1112223456789999999999999999
Q ss_pred CCCHHHHHHHH
Q 014484 232 RPNAKSLVISL 242 (423)
Q Consensus 232 Rps~~~vl~~l 242 (423)
|||++++++|-
T Consensus 271 R~t~~eil~hp 281 (350)
T d1koaa2 271 RMTIHQALEHP 281 (350)
T ss_dssp SCCHHHHHHST
T ss_pred CcCHHHHhcCc
Confidence 99999999883
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-49 Score=362.74 Aligned_cols=239 Identities=19% Similarity=0.242 Sum_probs=190.4
Q ss_pred CCCCccceeeee-----cceeeeeecCCC--hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF-----HCHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~-----~~~~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||++.+. +..+|+|.+... ....+.|.+|++++++++|||||++++++. ++..++||||+++|+|.+
T Consensus 18 G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~iv~E~~~~g~l~~ 96 (273)
T d1mp8a_ 18 GQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRS 96 (273)
T ss_dssp CSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEEEECCTTEEHHH
T ss_pred CCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeEEEEEEeccCCcHHh
Confidence 999999999874 244677766443 344678999999999999999999999996 467899999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-----CccccCcc
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYSTNLA 149 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~~t~~ 149 (423)
++.. ....+++..++.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++..... ....||+.
T Consensus 97 ~~~~-~~~~l~~~~~~~~~~qi~~gl~ylH~~~-iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~~~~~~~~~gt~~ 174 (273)
T d1mp8a_ 97 FLQV-RKYSLDLASLILYAYQLSTALAYLESKR-FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 174 (273)
T ss_dssp HHHH-TTTTSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECC-------------------CCGG
T ss_pred hhhc-cCCCCCHHHHHHHHHHHHHHhhhhcccC-eeccccchhheeecCCCcEEEccchhheeccCCcceeccceecCcc
Confidence 8754 3557999999999999999999999999 999999999999999999999999999865432 23457899
Q ss_pred cCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccC
Q 014484 150 FTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSE 228 (423)
Q Consensus 150 y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 228 (423)
|+|||.+.+..++.++|||||||++|||+| |.+||..... ..+...+........+..+|+++.+||.+||+.|
T Consensus 175 y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~-----~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~d 249 (273)
T d1mp8a_ 175 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN-----NDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYD 249 (273)
T ss_dssp GCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCG-----GGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred cchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCH-----HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCC
Confidence 999999999999999999999999999998 7777655321 2222222223334566778899999999999999
Q ss_pred cCCCCCHHHHHHHHHhhhhh
Q 014484 229 ARERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 229 p~~Rps~~~vl~~l~~~~~~ 248 (423)
|++|||+++|+++|..+.+.
T Consensus 250 p~~Rps~~ei~~~L~~i~~~ 269 (273)
T d1mp8a_ 250 PSRRPRFTELKAQLSTILEE 269 (273)
T ss_dssp GGGSCCHHHHHHHHHHHHHH
T ss_pred HhHCcCHHHHHHHHHHHHHH
Confidence 99999999999999887644
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-49 Score=369.29 Aligned_cols=233 Identities=18% Similarity=0.230 Sum_probs=200.5
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||++.+. +..+++|++.+.. .....+.+|+.+|+.++||||+++++++.+++.+|+|||||+||+|.++
T Consensus 16 G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv~ey~~gg~L~~~ 95 (337)
T d1o6la_ 16 GTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFH 95 (337)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHH
T ss_pred CcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccceeccCCCchhhh
Confidence 999999999874 7888999876532 2356788999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccC
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFT 151 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~ 151 (423)
+.+ .+.+++..+..++.||+.||.|||++| |+||||||+|||++.+|.+||+|||+++..... ....||+.|+
T Consensus 96 ~~~--~~~~~e~~~~~~~~qil~al~ylH~~~-iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~~~~~~~~GT~~Y~ 172 (337)
T d1o6la_ 96 LSR--ERVFTEERARFYGAEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYL 172 (337)
T ss_dssp HHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCBCCCEECGGGC
T ss_pred hhc--ccCCcHHHHHHHHHHHhhhhhhhhhcC-ccccccCHHHeEecCCCCEEEeecccccccccCCcccccceeCHHHh
Confidence 964 567999999999999999999999999 999999999999999999999999999865432 3467899999
Q ss_pred CccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCC
Q 014484 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARE 231 (423)
Q Consensus 152 aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 231 (423)
|||++.+..++.++|||||||++|||++|.+||.......... .... ....+|..+++++.+||.+||++||.+
T Consensus 173 aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~----~i~~--~~~~~p~~~s~~~~dli~~~L~~dP~~ 246 (337)
T d1o6la_ 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFE----LILM--EEIRFPRTLSPEAKSLLAGLLKKDPKQ 246 (337)
T ss_dssp CGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH----HHHH--CCCCCCTTSCHHHHHHHHHHTCSSTTT
T ss_pred hhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHH----HHhc--CCCCCCccCCHHHHHHHHhhccCCchh
Confidence 9999999999999999999999999999999988754332221 1111 123456678889999999999999999
Q ss_pred CCC-----HHHHHHHHH
Q 014484 232 RPN-----AKSLVISLM 243 (423)
Q Consensus 232 Rps-----~~~vl~~l~ 243 (423)
|++ ++++++|-.
T Consensus 247 R~~~~~~~~~eil~Hp~ 263 (337)
T d1o6la_ 247 RLGGGPSDAKEVMEHRF 263 (337)
T ss_dssp STTCSTTTHHHHHTSGG
T ss_pred hcccccccHHHHHcCcc
Confidence 995 899998743
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=4.5e-49 Score=365.37 Aligned_cols=233 Identities=18% Similarity=0.199 Sum_probs=200.2
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||++.+. +..+++|++.... ...+.+.+|+.+++.++|||||++++++.+++..|+|||||+||+|..+
T Consensus 15 G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~l~~~ 94 (316)
T d1fota_ 15 GSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSL 94 (316)
T ss_dssp CSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCCSCBHHHH
T ss_pred CcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEeeecCCcccccc
Confidence 999999999975 7889999875432 2356788999999999999999999999999999999999999999998
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-CccccCcccCCcc
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSYSTNLAFTPPE 154 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~~t~~y~aPE 154 (423)
+.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++..... .+..||+.|+|||
T Consensus 95 ~~~--~~~~~~~~~~~~~~qi~~al~~lH~~~-iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~Gt~~Y~APE 171 (316)
T d1fota_ 95 LRK--SQRFPNPVAKFYAAEVCLALEYLHSKD-IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPE 171 (316)
T ss_dssp HHH--TSSCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCCCCSCTTTCCHH
T ss_pred ccc--cccccccHHHHHHHHHHHhhhhhccCc-EEccccCchheeEcCCCCEEEecCccceEeccccccccCcccccCHH
Confidence 864 557899999999999999999999999 999999999999999999999999999876544 4567999999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCCC-
Q 014484 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERP- 233 (423)
Q Consensus 155 ~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp- 233 (423)
++.+..++.++|||||||++|+|++|..||......... ..+... ...++..+++++.+++.+||++||.+|+
T Consensus 172 ~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~----~~i~~~--~~~~p~~~s~~~~~li~~~L~~dp~~R~~ 245 (316)
T d1fota_ 172 VVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTY----EKILNA--ELRFPPFFNEDVKDLLSRLITRDLSQRLG 245 (316)
T ss_dssp HHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHH----HHHHHC--CCCCCTTSCHHHHHHHHHHTCSCTTTCTT
T ss_pred HHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHHH----HHHHcC--CCCCCCCCCHHHHHHHHHHhhhCHHhccc
Confidence 999999999999999999999999999998765322221 111111 2245566788999999999999999995
Q ss_pred ----CHHHHHHHHH
Q 014484 234 ----NAKSLVISLM 243 (423)
Q Consensus 234 ----s~~~vl~~l~ 243 (423)
|++++++|-.
T Consensus 246 ~~r~t~~~il~Hp~ 259 (316)
T d1fota_ 246 NLQNGTEDVKNHPW 259 (316)
T ss_dssp SSTTTTHHHHTSGG
T ss_pred cchhhHHHHHcCcc
Confidence 9999998843
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-49 Score=365.47 Aligned_cols=234 Identities=13% Similarity=0.119 Sum_probs=195.9
Q ss_pred CCCCccceeeee--cceeeeeecCCCh-------hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD-------LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~-------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 72 (423)
|+||.||++.+. +..+|+|++.... ...+.+.+|+++|++++|||||+++++|.+++..|+|||||+||+|
T Consensus 21 G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~gg~L 100 (293)
T d1jksa_ 21 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL 100 (293)
T ss_dssp CSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBH
T ss_pred CCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCccc
Confidence 999999999985 7788888874322 2356889999999999999999999999999999999999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCC----CeEEccccccccCCCC---Cccc
Q 014484 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG----NPRLSSFGLMKNSRDG---KSYS 145 (423)
Q Consensus 73 ~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~----~~kl~Dfg~~~~~~~~---~~~~ 145 (423)
.+++.+ .+.+++..+..++.|++.||.|||+++ |+||||||+||+++.++ .+|++|||+++..... ....
T Consensus 101 ~~~i~~--~~~l~~~~~~~~~~qi~~al~yLH~~~-ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~~~~~~~~~ 177 (293)
T d1jksa_ 101 FDFLAE--KESLTEEEATEFLKQILNGVYYLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF 177 (293)
T ss_dssp HHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESCSSSSSCCEEECCCTTCEECTTSCBCSCCC
T ss_pred cchhcc--ccccchhHHHHHHHHHHHHHHhhhhcc-eeecccccceEEEecCCCcccceEecchhhhhhcCCCccccccC
Confidence 999964 457999999999999999999999999 99999999999998776 4999999999876543 3457
Q ss_pred cCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhcccc--ccCCCChhHHHHHHHHHHH
Q 014484 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSA--LEGHFSNDEGTELVRLASR 223 (423)
Q Consensus 146 ~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~ 223 (423)
||+.|+|||++.+..++.++||||+||++|||++|..||.+....... ..+.... .....+..+++++.+||.+
T Consensus 178 ~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~----~~i~~~~~~~~~~~~~~~s~~~~~li~~ 253 (293)
T d1jksa_ 178 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL----ANVSAVNYEFEDEYFSNTSALAKDFIRR 253 (293)
T ss_dssp CCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHTTCCCCCHHHHTTSCHHHHHHHHT
T ss_pred CCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHH----HHHHhcCCCCCchhcCCCCHHHHHHHHH
Confidence 899999999999989999999999999999999999998765322211 1111111 1111123457789999999
Q ss_pred hcccCcCCCCCHHHHHHHH
Q 014484 224 CLQSEARERPNAKSLVISL 242 (423)
Q Consensus 224 cl~~dp~~Rps~~~vl~~l 242 (423)
||+.||.+|||++++++|-
T Consensus 254 ~L~~dP~~R~s~~eil~hp 272 (293)
T d1jksa_ 254 LLVKDPKKRMTIQDSLQHP 272 (293)
T ss_dssp TSCSSGGGSCCHHHHHHST
T ss_pred HccCChhHCcCHHHHhcCc
Confidence 9999999999999999874
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-49 Score=370.62 Aligned_cols=239 Identities=16% Similarity=0.270 Sum_probs=196.9
Q ss_pred CCCCccceeeee--c----ceeeeeecCCC--hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHH
Q 014484 2 GGRCSKFSICWF--H----CHLKSSVLESS--DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLA 73 (423)
Q Consensus 2 G~~g~v~~~~~~--~----~~~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 73 (423)
|+||.||++.+. + ..+++|.+... ....+.|.+|++++++++|||||+++++|.++ ..+++||++.+|+|.
T Consensus 20 G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~v~e~~~~~~l~ 98 (317)
T d1xkka_ 20 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLL 98 (317)
T ss_dssp CSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEEEEECCTTCBHH
T ss_pred CCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CeeEEEEeccCCccc
Confidence 999999999874 2 24666665432 23467899999999999999999999999865 578889999999999
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC------ccccC
Q 014484 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK------SYSTN 147 (423)
Q Consensus 74 ~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~------~~~~t 147 (423)
+++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++++||+|||+++...... ...||
T Consensus 99 ~~~~~-~~~~~~~~~~~~i~~qi~~gl~yLH~~~-iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt 176 (317)
T d1xkka_ 99 DYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDRR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 176 (317)
T ss_dssp HHHHH-TSSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTCC--------CC
T ss_pred ccccc-cccCCCHHHHHHHHHHHHHHHHHHHHcC-cccCcchhhcceeCCCCCeEeeccccceecccccccccccccccC
Confidence 98865 4567999999999999999999999999 9999999999999999999999999998654322 23578
Q ss_pred cccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcc
Q 014484 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQ 226 (423)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 226 (423)
+.|+|||++.++.++.++|||||||++|||+| |.+||.... ...+...+........+..+++++.+++.+||+
T Consensus 177 ~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~-----~~~~~~~i~~~~~~~~p~~~~~~~~~li~~cl~ 251 (317)
T d1xkka_ 177 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP-----ASEISSILEKGERLPQPPICTIDVYMIMVKCWM 251 (317)
T ss_dssp TTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSC-----GGGHHHHHHHTCCCCCCTTBCHHHHHHHHHHTC
T ss_pred ccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCC-----HHHHHHHHHcCCCCCCCcccCHHHHHHHHHhCC
Confidence 99999999999999999999999999999999 566665432 222333333344445667788999999999999
Q ss_pred cCcCCCCCHHHHHHHHHhhhhh
Q 014484 227 SEARERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 227 ~dp~~Rps~~~vl~~l~~~~~~ 248 (423)
.||.+|||+.+++.+|..+.+.
T Consensus 252 ~dP~~RPs~~eil~~l~~~~~~ 273 (317)
T d1xkka_ 252 IDADSRPKFRELIIEFSKMARD 273 (317)
T ss_dssp SSGGGSCCHHHHHHHHHHHHHS
T ss_pred CChhhCcCHHHHHHHHHHHHhC
Confidence 9999999999999999887654
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.5e-49 Score=364.19 Aligned_cols=241 Identities=18% Similarity=0.218 Sum_probs=198.0
Q ss_pred CCCCccceeeeec----ceeeeeecCC--ChhhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWFH----CHLKSSVLES--SDLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~~----~~~~~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||++.+.. ..+|+|.+.. .....+.|.+|+++|+++ +|||||+++++|.+++..++||||++||+|.+
T Consensus 21 G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV~ey~~~g~L~~ 100 (309)
T d1fvra_ 21 GNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD 100 (309)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHH
T ss_pred CCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEEEEecCCCcHHH
Confidence 8999999999863 2466666533 233456799999999999 79999999999999999999999999999999
Q ss_pred hhccC--------------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCC
Q 014484 75 HLFHW--------------ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD 140 (423)
Q Consensus 75 ~i~~~--------------~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 140 (423)
++... ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 101 ~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~-iiHrDlkp~NIL~~~~~~~kl~DfG~a~~~~~ 179 (309)
T d1fvra_ 101 FLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNILVGENYVAKIADFGLSRGQEV 179 (309)
T ss_dssp HHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECGGGCEEECCTTCEESSCE
T ss_pred HHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCC-ccccccccceEEEcCCCceEEccccccccccc
Confidence 99643 2467999999999999999999999999 99999999999999999999999999976553
Q ss_pred C---CccccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCC-CCchhhHHhhhchhhhhccccccCCCChhHHHH
Q 014484 141 G---KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHI-PPSHALDLIRSKNFLLLMDSALEGHFSNDEGTE 216 (423)
Q Consensus 141 ~---~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (423)
. ....||..|+|||.+.+..++.++|||||||++|||++|..| |.... ...+...+........+..++++
T Consensus 180 ~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~-----~~~~~~~i~~~~~~~~~~~~~~~ 254 (309)
T d1fvra_ 180 YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT-----CAELYEKLPQGYRLEKPLNCDDE 254 (309)
T ss_dssp ECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC-----HHHHHHHGGGTCCCCCCTTBCHH
T ss_pred cccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCC-----HHHHHHHHHhcCCCCCCccCCHH
Confidence 3 344689999999999999999999999999999999998754 43321 12222223333445566778899
Q ss_pred HHHHHHHhcccCcCCCCCHHHHHHHHHhhhhh
Q 014484 217 LVRLASRCLQSEARERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 217 l~~li~~cl~~dp~~Rps~~~vl~~l~~~~~~ 248 (423)
+.+||.+||+.||++|||+++|+++|+++.+.
T Consensus 255 ~~~li~~cl~~dP~~RPs~~eil~~L~~i~~~ 286 (309)
T d1fvra_ 255 VYDLMRQCWREKPYERPSFAQILVSLNRMLEE 286 (309)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 99999999999999999999999999998764
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-48 Score=361.25 Aligned_cols=241 Identities=18% Similarity=0.249 Sum_probs=199.3
Q ss_pred CCCCccceeeeec-----ceeeeeecCC--ChhhHHHHHHHHHHHhcCCCCCccceEeEEEeC-CceeEEEecCCCCCHH
Q 014484 2 GGRCSKFSICWFH-----CHLKSSVLES--SDLGETLNLEEAKAVGNLRSERLANLIGCCYEA-DERLLVAEFMPNETLA 73 (423)
Q Consensus 2 G~~g~v~~~~~~~-----~~~~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-~~~~lv~e~~~~~~L~ 73 (423)
|+||.||++.+.. ..+|+|.+.. .....+.|.+|+++|++++||||+++++++... +..++|||||++|+|.
T Consensus 38 G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~~~g~l~ 117 (311)
T d1r0pa_ 38 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 117 (311)
T ss_dssp ETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECCTTCBHH
T ss_pred cCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEeecCchh
Confidence 8999999999842 2477777753 444567899999999999999999999998764 5789999999999999
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC--------Cccc
Q 014484 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--------KSYS 145 (423)
Q Consensus 74 ~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--------~~~~ 145 (423)
+++.. ....+++..+++++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++..... ....
T Consensus 118 ~~~~~-~~~~~~~~~~~~i~~qia~gL~~lH~~~-iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~~~~~~~~ 195 (311)
T d1r0pa_ 118 NFIRN-ETHNPTVKDLIGFGLQVAKGMKFLASKK-FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAK 195 (311)
T ss_dssp HHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCCTTCTTCSS
T ss_pred hhhcc-ccccchHHHHHHHHHHHHHhhhhhcccC-cccCCccHHhEeECCCCCEEEecccchhhccccccccceeccccc
Confidence 98864 4556889999999999999999999999 999999999999999999999999999865432 2245
Q ss_pred cCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhc
Q 014484 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCL 225 (423)
Q Consensus 146 ~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 225 (423)
||+.|+|||.+.++.++.++|||||||++|||+||+.||...... ..+...+........+..+++++.+++.+||
T Consensus 196 gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~----~~~~~~i~~g~~~~~p~~~~~~l~~li~~cl 271 (311)
T d1r0pa_ 196 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT----FDITVYLLQGRRLLQPEYCPDPLYEVMLKCW 271 (311)
T ss_dssp CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC----------CHHHHHTTCCCCCCTTCCHHHHHHHHHHT
T ss_pred ccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCH----HHHHHHHHcCCCCCCcccCcHHHHHHHHHHc
Confidence 789999999999999999999999999999999988777654211 1122222222334455667889999999999
Q ss_pred ccCcCCCCCHHHHHHHHHhhhhh
Q 014484 226 QSEARERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 226 ~~dp~~Rps~~~vl~~l~~~~~~ 248 (423)
+.||++|||+.||+++|+.+...
T Consensus 272 ~~dP~~RPs~~ei~~~L~~i~~~ 294 (311)
T d1r0pa_ 272 HPKAEMRPSFSELVSRISAIFST 294 (311)
T ss_dssp CSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CCCHhHCcCHHHHHHHHHHHHHh
Confidence 99999999999999999988754
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.1e-48 Score=361.36 Aligned_cols=239 Identities=20% Similarity=0.238 Sum_probs=198.7
Q ss_pred CCCCccceeeeec-------ceeeeeecCCCh--hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICWFH-------CHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~~~-------~~~~~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 72 (423)
||||.||++.+.+ ..+++|++.... ...+.|.+|++++++++||||++++++|...+..++||||+++|+|
T Consensus 24 G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~v~e~~~~g~L 103 (301)
T d1lufa_ 24 GAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDL 103 (301)
T ss_dssp CSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEECCTTCBH
T ss_pred CCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccCCceEEEEEecCCCcH
Confidence 9999999999864 567888775433 3456799999999999999999999999999999999999999999
Q ss_pred HhhhccCC----------------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEc
Q 014484 73 AKHLFHWE----------------------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLS 130 (423)
Q Consensus 73 ~~~i~~~~----------------------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~ 130 (423)
.+++.... ...+++..++.++.|++.||.|||+++ +|||||||+|||++.++.+||+
T Consensus 104 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~-ivHrDlKp~NILld~~~~~Kl~ 182 (301)
T d1lufa_ 104 NEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK-FVHRDLATRNCLVGENMVVKIA 182 (301)
T ss_dssp HHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEEC
T ss_pred HHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCC-eEeeEEcccceEECCCCcEEEc
Confidence 99985321 234889999999999999999999999 9999999999999999999999
Q ss_pred cccccccCCCC------CccccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCC-CCCchhhHHhhhchhhhhccc
Q 014484 131 SFGLMKNSRDG------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKH-IPPSHALDLIRSKNFLLLMDS 203 (423)
Q Consensus 131 Dfg~~~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~-~~~~~~~~~~~~~~~~~~~~~ 203 (423)
|||+++..... .+..+|+.|+|||.+.+..++.++|||||||++|||++|.. ||...... .....+..
T Consensus 183 DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~-----e~~~~v~~ 257 (301)
T d1lufa_ 183 DFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHE-----EVIYYVRD 257 (301)
T ss_dssp CCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-----HHHHHHHT
T ss_pred cchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCCHH-----HHHHHHHc
Confidence 99998754322 23467889999999999999999999999999999999975 44443211 11222222
Q ss_pred cccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhh
Q 014484 204 ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQ 246 (423)
Q Consensus 204 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~~ 246 (423)
......+..+++++.+|+.+||+.||++|||+.+|++.|+++.
T Consensus 258 ~~~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~ 300 (301)
T d1lufa_ 258 GNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC 300 (301)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred CCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence 3334556678889999999999999999999999999998865
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.3e-49 Score=364.63 Aligned_cols=234 Identities=15% Similarity=0.191 Sum_probs=200.0
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhccC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW 79 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~ 79 (423)
|+||.||++.+. +..+++|++.........+.+|+++|..++|||||++++++.+++.+|+|||||+||+|.+++..
T Consensus 16 G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~~~gg~L~~~i~~- 94 (321)
T d1tkia_ 16 GEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINT- 94 (321)
T ss_dssp CSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCBHHHHHTS-
T ss_pred CCCeEEEEEEECCCCcEEEEEEEcCCcccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEecCCCCcHHHHHHh-
Confidence 999999999985 77899999888877777889999999999999999999999999999999999999999999964
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCC--CCeEEccccccccCCCCC---ccccCcccCCcc
Q 014484 80 ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKD--GNPRLSSFGLMKNSRDGK---SYSTNLAFTPPE 154 (423)
Q Consensus 80 ~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~--~~~kl~Dfg~~~~~~~~~---~~~~t~~y~aPE 154 (423)
.+..+++.++..++.||+.||.|||++| |+||||||+|||++.+ +.+||+|||+++...... ...+|+.|+|||
T Consensus 95 ~~~~l~e~~~~~i~~qi~~al~yLH~~~-iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~~~~~~~t~~y~ape 173 (321)
T d1tkia_ 95 SAFELNEREIVSYVHQVCEALQFLHSHN-IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPE 173 (321)
T ss_dssp SSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEEEEESCGGGSCHH
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCcccccccceeecCCCceEEEEcccchhhccccCCcccccccccccccch
Confidence 3447999999999999999999999999 9999999999999854 479999999998766543 346899999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCC----hhHHHHHHHHHHHhcccCcC
Q 014484 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFS----NDEGTELVRLASRCLQSEAR 230 (423)
Q Consensus 155 ~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dp~ 230 (423)
.+.+..++.++||||+||++|+|++|..||........ ...+..... .++ ..+++++.+||.+||+.||.
T Consensus 174 ~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~----~~~i~~~~~--~~~~~~~~~~s~~~~~li~~~L~~dp~ 247 (321)
T d1tkia_ 174 VHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQI----IENIMNAEY--TFDEEAFKEISIEAMDFVDRLLVKERK 247 (321)
T ss_dssp HHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHH----HHHHHHTCC--CCCHHHHTTSCHHHHHHHHTTSCSSGG
T ss_pred hccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHH----HHHHHhCCC--CCChhhccCCCHHHHHHHHHHccCChh
Confidence 99999999999999999999999999999877533221 111111111 122 23577899999999999999
Q ss_pred CCCCHHHHHHHHH
Q 014484 231 ERPNAKSLVISLM 243 (423)
Q Consensus 231 ~Rps~~~vl~~l~ 243 (423)
+|||++|+++|-+
T Consensus 248 ~R~s~~eil~hp~ 260 (321)
T d1tkia_ 248 SRMTASEALQHPW 260 (321)
T ss_dssp GSCCHHHHHHSHH
T ss_pred HCcCHHHHhcCHh
Confidence 9999999999854
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-48 Score=365.55 Aligned_cols=237 Identities=14% Similarity=0.124 Sum_probs=191.0
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHHhcC-CCCCccceEeEEEe----CCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNL-RSERLANLIGCCYE----ADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~----~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||++.+. +..+|+|++... ..+.+|+.++.++ +|||||+++++|.+ +..+|+|||||+||+|.+
T Consensus 23 G~fg~Vy~a~~~~~~~~vAiK~i~~~----~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~ivmEy~~gg~L~~ 98 (335)
T d2ozaa1 23 GINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFS 98 (335)
T ss_dssp CSSCEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHH
T ss_pred ccCeEEEEEEECCCCCEEEEEEECCc----HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEEEEEECCCCCcHHH
Confidence 999999999974 678899987544 4577899987655 89999999999976 356899999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecC---CCCeEEccccccccCCCC---CccccCc
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK---DGNPRLSSFGLMKNSRDG---KSYSTNL 148 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~---~~~~kl~Dfg~~~~~~~~---~~~~~t~ 148 (423)
++.+.....+++.++..++.||+.||.|||++| |+||||||+|||++. .+.+||+|||+++..... ....||+
T Consensus 99 ~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~-iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~~~~~~~~gt~ 177 (335)
T d2ozaa1 99 RIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN-IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTP 177 (335)
T ss_dssp HHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESCSSTTCCEEECCCTTCEECCCCCCCCCCSCCC
T ss_pred HHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcC-CccccccccccccccccccccccccccceeeeccCCCccccccCCc
Confidence 997655567999999999999999999999999 999999999999975 457999999999865543 4467999
Q ss_pred ccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccC--CCChhHHHHHHHHHHHhcc
Q 014484 149 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEG--HFSNDEGTELVRLASRCLQ 226 (423)
Q Consensus 149 ~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~ 226 (423)
.|+|||++.+..++.++|||||||++|+|+||..||.+..................... .....+++++.+||.+||+
T Consensus 178 ~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~ 257 (335)
T d2ozaa1 178 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLK 257 (335)
T ss_dssp SSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSSSCCTTHHHHSCHHHHHHHHHHSC
T ss_pred ccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCcccccCCHHHHHHHHHHcc
Confidence 99999999999999999999999999999999999876421111111111111111111 1112467889999999999
Q ss_pred cCcCCCCCHHHHHHHHH
Q 014484 227 SEARERPNAKSLVISLM 243 (423)
Q Consensus 227 ~dp~~Rps~~~vl~~l~ 243 (423)
.||++|||+.++++|-+
T Consensus 258 ~dP~~R~s~~eil~hp~ 274 (335)
T d2ozaa1 258 TEPTQRMTITEFMNHPW 274 (335)
T ss_dssp SSTTTSCCHHHHHHSHH
T ss_pred CChhHCcCHHHHHcCHH
Confidence 99999999999998854
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-48 Score=361.18 Aligned_cols=242 Identities=19% Similarity=0.268 Sum_probs=190.5
Q ss_pred CCCCccceeeeec-------ceeeeeecCCC--hhhHHHHHHHHHHHhcC-CCCCccceEeEEEeCC-ceeEEEecCCCC
Q 014484 2 GGRCSKFSICWFH-------CHLKSSVLESS--DLGETLNLEEAKAVGNL-RSERLANLIGCCYEAD-ERLLVAEFMPNE 70 (423)
Q Consensus 2 G~~g~v~~~~~~~-------~~~~~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~-~~~lv~e~~~~~ 70 (423)
|+||.||++.+.+ ..+++|++... ......+.+|+..+.++ +|+||+.+++++...+ ..++|||||++|
T Consensus 24 G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~~iv~E~~~~g 103 (299)
T d1ywna1 24 GAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 103 (299)
T ss_dssp CSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEEECCTTC
T ss_pred cCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCCeEEEEEEecCCC
Confidence 9999999999853 45788877543 33456788888888888 6889999999987654 589999999999
Q ss_pred CHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccc
Q 014484 71 TLAKHLFHWE--------------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK 136 (423)
Q Consensus 71 ~L~~~i~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~ 136 (423)
+|.+++.... ...+++.+++.++.||+.||.|||+++ |+||||||+|||++.++++||+|||+++
T Consensus 104 ~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~-ivHrDlKp~NILl~~~~~~Kl~DFGla~ 182 (299)
T d1ywna1 104 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSEKNVVKICDFGLAR 182 (299)
T ss_dssp BHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECGGGCEEECC-----
T ss_pred cHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCC-CcCCcCCccceeECCCCcEEEccCcchh
Confidence 9999996421 235899999999999999999999999 9999999999999999999999999998
Q ss_pred cCCCC------CccccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCC-CCCchhhHHhhhchhhhhccccccCCC
Q 014484 137 NSRDG------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKH-IPPSHALDLIRSKNFLLLMDSALEGHF 209 (423)
Q Consensus 137 ~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (423)
..... ....||+.|+|||.+.++.++.++|||||||++|||+||.. ||..... ...+...+........
T Consensus 183 ~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~----~~~~~~~~~~~~~~~~ 258 (299)
T d1ywna1 183 DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI----DEEFCRRLKEGTRMRA 258 (299)
T ss_dssp -CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCC----SHHHHHHHHHTCCCCC
T ss_pred hccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCH----HHHHHHHHhcCCCCCC
Confidence 65432 23468999999999999999999999999999999999865 4443211 1122233333344456
Q ss_pred ChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhhh
Q 014484 210 SNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 210 ~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~~~~ 248 (423)
+..+++++.+++.+||+.||++|||++++++||+.+.+.
T Consensus 259 ~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~ilq~ 297 (299)
T d1ywna1 259 PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 297 (299)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 667788999999999999999999999999999987654
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.7e-48 Score=366.45 Aligned_cols=233 Identities=15% Similarity=0.180 Sum_probs=199.8
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (423)
|+||.||++.+. +..+|+|++.... ...+.+.+|+++|+.++|||||++++++.+....++||||+.||+|..+
T Consensus 52 G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~e~~~~g~l~~~ 131 (350)
T d1rdqe_ 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSH 131 (350)
T ss_dssp CSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHH
T ss_pred CcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeecccccccccccccccccccccchhhh
Confidence 999999999985 7888999875432 2345788999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-CccccCcccCCcc
Q 014484 76 LFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSYSTNLAFTPPE 154 (423)
Q Consensus 76 i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~~t~~y~aPE 154 (423)
+.+ .+.+++..+..++.||+.||.|||+++ ||||||||+|||++.+|++||+|||+++..... ....||+.|||||
T Consensus 132 l~~--~~~l~e~~~~~i~~qi~~aL~yLH~~~-iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~~~~~~Gt~~Y~APE 208 (350)
T d1rdqe_ 132 LRR--IGRFSEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPE 208 (350)
T ss_dssp HHH--HCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCCCEECGGGCCHH
T ss_pred Hhh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCcCCHHHcccCCCCCEEeeeceeeeecccccccccCccccCCHH
Confidence 864 457999999999999999999999999 999999999999999999999999999877644 4567999999999
Q ss_pred ccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcCCC--
Q 014484 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARER-- 232 (423)
Q Consensus 155 ~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R-- 232 (423)
++.+..++.++|||||||++|||+||..||........ ...+... ...++..+++++.++|.+||+.||.+|
T Consensus 209 ~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~----~~~i~~~--~~~~p~~~s~~~~~li~~~L~~dP~kR~~ 282 (350)
T d1rdqe_ 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI----YEKIVSG--KVRFPSHFSSDLKDLLRNLLQVDLTKRFG 282 (350)
T ss_dssp HHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHC--CCCCCTTCCHHHHHHHHHHSCSCTTTCTT
T ss_pred HHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHH----HHHHhcC--CCCCCccCCHHHHHHHHHHhhhCHHhccc
Confidence 99999999999999999999999999999876532221 1111111 223456678899999999999999999
Q ss_pred ---CCHHHHHHHHH
Q 014484 233 ---PNAKSLVISLM 243 (423)
Q Consensus 233 ---ps~~~vl~~l~ 243 (423)
||++++++|-.
T Consensus 283 ~~r~t~~ell~Hp~ 296 (350)
T d1rdqe_ 283 NLKNGVNDIKNHKW 296 (350)
T ss_dssp SSTTTTHHHHTSGG
T ss_pred cccccHHHHHcCcc
Confidence 48999998743
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-48 Score=355.69 Aligned_cols=237 Identities=18% Similarity=0.221 Sum_probs=191.1
Q ss_pred CCCCccceeeeec-----ceeeeeecCCC----hhhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICWFH-----CHLKSSVLESS----DLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~~~-----~~~~~~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 72 (423)
||||.||++.+.. ..+|+|++... ....+.|.+|+++|.+++||||++++++|.+ +..++||||+++|+|
T Consensus 19 G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~~lv~e~~~~~~l 97 (273)
T d1u46a_ 19 GSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMKMVTELAPLGSL 97 (273)
T ss_dssp ---CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECCTTCBH
T ss_pred CCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cchheeeeeecCcch
Confidence 8999999998753 35777777543 3345688999999999999999999999976 467899999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC-------ccc
Q 014484 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK-------SYS 145 (423)
Q Consensus 73 ~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-------~~~ 145 (423)
.+++.. ..+.+++..++.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++...... ...
T Consensus 98 ~~~~~~-~~~~l~~~~~~~~~~qi~~gl~ylH~~~-iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~~~~~~~~~~~~~ 175 (273)
T d1u46a_ 98 LDRLRK-HQGHFLLGTLSRYAVQVAEGMGYLESKR-FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 175 (273)
T ss_dssp HHHHHH-HGGGSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEEC-----
T ss_pred hhhhhc-ccCCCCHHHHHHHHHHHHHHHHHhhhCC-EeeeeecHHHhccccccceeeccchhhhhcccCCCcceecCccc
Confidence 988764 3456999999999999999999999999 9999999999999999999999999998765432 234
Q ss_pred cCcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHh
Q 014484 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRC 224 (423)
Q Consensus 146 ~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 224 (423)
++..|+|||.+.+..++.++|||||||++|||+| |..||....... ....+.......+.+..+|+++.++|.+|
T Consensus 176 ~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~----~~~~i~~~~~~~~~~~~~~~~l~~li~~c 251 (273)
T d1u46a_ 176 VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ----ILHKIDKEGERLPRPEDCPQDIYNVMVQC 251 (273)
T ss_dssp CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH----HHHHHHTSCCCCCCCTTCCHHHHHHHHHH
T ss_pred cCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHH----HHHHHHhCCCCCCCcccccHHHHHHHHHH
Confidence 6789999999999999999999999999999998 788876542222 12223333344455667788999999999
Q ss_pred cccCcCCCCCHHHHHHHHHhh
Q 014484 225 LQSEARERPNAKSLVISLMSL 245 (423)
Q Consensus 225 l~~dp~~Rps~~~vl~~l~~~ 245 (423)
|+.||.+|||+.+|++.|.+.
T Consensus 252 l~~dp~~RPt~~ei~~~L~~~ 272 (273)
T d1u46a_ 252 WAHKPEDRPTFVALRDFLLEA 272 (273)
T ss_dssp TCSSGGGSCCHHHHHHHHHHH
T ss_pred cCCChhHCcCHHHHHHHHHhc
Confidence 999999999999999888754
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=2.8e-48 Score=353.31 Aligned_cols=234 Identities=16% Similarity=0.156 Sum_probs=196.0
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----------hhHHHHHHHHHHHhcCC-CCCccceEeEEEeCCceeEEEecCC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----------LGETLNLEEAKAVGNLR-SERLANLIGCCYEADERLLVAEFMP 68 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----------~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~ 68 (423)
|+||.||++.+. +..+|+|++.... ...+.+.+|+.++++++ ||||+++++++.+++..|+|||||+
T Consensus 14 G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~ivmE~~~ 93 (277)
T d1phka_ 14 GVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMK 93 (277)
T ss_dssp CSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred CcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccCcceEEEEEcCC
Confidence 899999999874 6788888875432 12346889999999996 9999999999999999999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC---Cccc
Q 014484 69 NETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYS 145 (423)
Q Consensus 69 ~~~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~ 145 (423)
||+|.+++.. .+++++.++..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....
T Consensus 94 ~g~L~~~l~~--~~~l~e~~~~~~~~qi~~al~~lH~~~-ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~ 170 (277)
T d1phka_ 94 KGELFDYLTE--KVTLSEKETRKIMRALLEVICALHKLN-IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVC 170 (277)
T ss_dssp TCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECCTTCCBCCCC
T ss_pred CchHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHcC-CcccccccceEEEcCCCCeEEccchheeEccCCCceeeee
Confidence 9999999964 457999999999999999999999999 999999999999999999999999999876543 3456
Q ss_pred cCcccCCcccccc------CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccc--cccCCCChhHHHHH
Q 014484 146 TNLAFTPPEYMRT------GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS--ALEGHFSNDEGTEL 217 (423)
Q Consensus 146 ~t~~y~aPE~~~~------~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l 217 (423)
||+.|+|||.+.+ ..++.++||||+||++|+|++|..||......... ...... .........+|+++
T Consensus 171 gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~----~~i~~~~~~~~~~~~~~~s~~~ 246 (277)
T d1phka_ 171 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLML----RMIMSGNYQFGSPEWDDYSDTV 246 (277)
T ss_dssp SCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHHTCCCCCTTTGGGSCHHH
T ss_pred ccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHH----HHHHhCCCCCCCcccccCCHHH
Confidence 8999999998863 24788999999999999999999999875322221 111211 12223344678999
Q ss_pred HHHHHHhcccCcCCCCCHHHHHHHH
Q 014484 218 VRLASRCLQSEARERPNAKSLVISL 242 (423)
Q Consensus 218 ~~li~~cl~~dp~~Rps~~~vl~~l 242 (423)
.+|+.+||+.||.+|||++++++|-
T Consensus 247 ~~li~~~L~~~p~~R~s~~eil~h~ 271 (277)
T d1phka_ 247 KDLVSRFLVVQPQKRYTAEEALAHP 271 (277)
T ss_dssp HHHHHHHCCSSGGGSCCHHHHTTSG
T ss_pred HHHHHHHccCChhHCcCHHHHHcCH
Confidence 9999999999999999999998873
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=3.1e-48 Score=354.42 Aligned_cols=240 Identities=18% Similarity=0.214 Sum_probs=193.3
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCc----eeEEEecCCCCC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVGNLRSERLANLIGCCYEADE----RLLVAEFMPNET 71 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~----~~lv~e~~~~~~ 71 (423)
|+||.||++.+. +..+++|++.... .....+.+|+++++.++|||||++++++...+. .|+|||||+|++
T Consensus 18 G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~~lvmE~~~g~~ 97 (277)
T d1o6ya_ 18 GGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVT 97 (277)
T ss_dssp CSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEEEEEEECCCEEE
T ss_pred CCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceEEEEEECCCCCE
Confidence 999999999975 7889999885432 335578999999999999999999999987654 789999999999
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-------Ccc
Q 014484 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-------KSY 144 (423)
Q Consensus 72 L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-------~~~ 144 (423)
|.+++.. .+.+++.++..++.||+.||.|||++| |+||||||+|||++.++..+++|||.++..... ...
T Consensus 98 L~~~~~~--~~~l~~~~~~~i~~qi~~al~~lH~~~-iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~ 174 (277)
T d1o6ya_ 98 LRDIVHT--EGPMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAV 174 (277)
T ss_dssp HHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTSCEEECCCTTCEECC------------
T ss_pred ehhhhcc--cCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCccccCcccccCccccceeehhhhhhhhccccccccccccc
Confidence 9998864 457999999999999999999999999 999999999999999999999999988654322 334
Q ss_pred ccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHh
Q 014484 145 STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRC 224 (423)
Q Consensus 145 ~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 224 (423)
.||+.|+|||++.+..++.++|||||||++|+|+||..||............... ...........+|+++.++|.+|
T Consensus 175 ~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~s~~l~~li~~~ 252 (277)
T d1o6ya_ 175 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE--DPIPPSARHEGLSADLDAVVLKA 252 (277)
T ss_dssp ----TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHC--CCCCGGGTSSSCCHHHHHHHHHH
T ss_pred cCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhc--CCCCCchhccCCCHHHHHHHHHH
Confidence 6899999999999989999999999999999999999998765322221111111 11111123345678999999999
Q ss_pred cccCcCCCC-CHHHHHHHHHhhh
Q 014484 225 LQSEARERP-NAKSLVISLMSLQ 246 (423)
Q Consensus 225 l~~dp~~Rp-s~~~vl~~l~~~~ 246 (423)
|++||.+|| |++++++.|.++.
T Consensus 253 L~~dp~~R~~sa~~l~~~l~r~~ 275 (277)
T d1o6ya_ 253 LAKNPENRYQTAAEMRADLVRVH 275 (277)
T ss_dssp TCSSGGGSCSSHHHHHHHHHHHH
T ss_pred ccCCHhHCHhHHHHHHHHHHHHh
Confidence 999999998 8999999888764
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-47 Score=354.23 Aligned_cols=240 Identities=19% Similarity=0.291 Sum_probs=197.5
Q ss_pred CCCCccceeeeec---------ceeeeeecCCCh--hhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCC
Q 014484 2 GGRCSKFSICWFH---------CHLKSSVLESSD--LGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPN 69 (423)
Q Consensus 2 G~~g~v~~~~~~~---------~~~~~~~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 69 (423)
||||.||++.+.+ ..+++|.+.... .....+.+|+..+.++ +|||||+++++|.+++..++|||||++
T Consensus 24 G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~~~~~~v~e~~~~ 103 (299)
T d1fgka_ 24 GAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 103 (299)
T ss_dssp ----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEECCCTT
T ss_pred cCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccCCeEEEEEEccCC
Confidence 9999999998753 247777774433 4457888999999998 899999999999999999999999999
Q ss_pred CCHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEcccccc
Q 014484 70 ETLAKHLFHWE--------------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLM 135 (423)
Q Consensus 70 ~~L~~~i~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~ 135 (423)
|+|.++|.... ...+++.+++.++.||+.||+|||+++ ||||||||+|||++.++.+||+|||++
T Consensus 104 g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~-ivHrDiKp~NiLl~~~~~~kl~dfg~~ 182 (299)
T d1fgka_ 104 GNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK-CIHRDLAARNVLVTEDNVMKIADFGLA 182 (299)
T ss_dssp CBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTCCEEECSTTCC
T ss_pred CcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCC-EEeeeecccceeecCCCCeEeccchhh
Confidence 99999996432 246899999999999999999999999 999999999999999999999999998
Q ss_pred ccCCCC------CccccCcccCCccccccCCCCCCcceehhHHHHHHHhh-CCCCCCchhhHHhhhchhhhhccccccCC
Q 014484 136 KNSRDG------KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGH 208 (423)
Q Consensus 136 ~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (423)
+..... ....+|+.|+|||.+.++.++.++|||||||++|||++ |.+||...... .+...+.......
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~-----~~~~~i~~~~~~~ 257 (299)
T d1fgka_ 183 RDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE-----ELFKLLKEGHRMD 257 (299)
T ss_dssp CCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-----HHHHHHHTTCCCC
T ss_pred ccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHH-----HHHHHHHcCCCCC
Confidence 855432 23467899999999999999999999999999999998 56666543222 2223333344555
Q ss_pred CChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhh
Q 014484 209 FSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQK 247 (423)
Q Consensus 209 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~~~ 247 (423)
.+..+++++.+||.+||+.||.+|||+.+|++.|+++..
T Consensus 258 ~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~a 296 (299)
T d1fgka_ 258 KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 296 (299)
T ss_dssp CCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHhh
Confidence 667788899999999999999999999999999988754
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=9.6e-48 Score=363.19 Aligned_cols=236 Identities=20% Similarity=0.207 Sum_probs=193.6
Q ss_pred CCCCccceeeee--cceeeeeecCCChh----hHHHHHH---HHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDL----GETLNLE---EAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~----~~~~~~~---E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 72 (423)
||||.||++.+. +..+|+|++..... ....+.+ |+++++.++|||||+++++|.+.+.+|+|||||+||+|
T Consensus 15 G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~ivmE~~~gg~L 94 (364)
T d1omwa3 15 GGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDL 94 (364)
T ss_dssp CSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred CCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEEEEEEecCCCcH
Confidence 999999999985 78899998754332 2233444 47778888999999999999999999999999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC--CccccCccc
Q 014484 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTNLAF 150 (423)
Q Consensus 73 ~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--~~~~~t~~y 150 (423)
.+++.+ ...+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++..... ....||+.|
T Consensus 95 ~~~l~~--~~~~~e~~~~~~~~qi~~aL~ylH~~~-iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~~~~~~~~GT~~y 171 (364)
T d1omwa3 95 HYHLSQ--HGVFSEADMRFYAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGY 171 (364)
T ss_dssp HHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECSSSCEEECCCTTCEECSSSCCCSCCSCGGG
T ss_pred HHHHHh--cccccHHHHHHHHHHHHHHHHHHHHCC-ccceeeccceeEEcCCCcEEEeeeceeeecCCCccccccccccc
Confidence 999964 457899999999999999999999999 999999999999999999999999999876543 346799999
Q ss_pred CCcccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCc
Q 014484 151 TPPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEA 229 (423)
Q Consensus 151 ~aPE~~~~-~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 229 (423)
+|||++.. ..++.++|||||||++|||+||..||......... .+.. ........++..+++++.+||.+||+.||
T Consensus 172 ~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~--~~~~-~~~~~~~~~~~~~s~~~~~li~~~L~~dP 248 (364)
T d1omwa3 172 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH--EIDR-MTLTMAVELPDSFSPELRSLLEGLLQRDV 248 (364)
T ss_dssp CCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHH--HHHH-HSSSCCCCCCSSSCHHHHHHHHHHTCSST
T ss_pred chhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHH--HHHH-hcccCCCCCCCCCCHHHHHHHHHHcccCH
Confidence 99999874 56899999999999999999999998754211110 1111 11122334456678899999999999999
Q ss_pred CCCCC-----HHHHHHHHH
Q 014484 230 RERPN-----AKSLVISLM 243 (423)
Q Consensus 230 ~~Rps-----~~~vl~~l~ 243 (423)
.+||| ++++++|-+
T Consensus 249 ~~R~t~~~~~a~eil~Hp~ 267 (364)
T d1omwa3 249 NRRLGCLGRGAQEVKESPF 267 (364)
T ss_dssp TTSTTTSSSTHHHHHTSGG
T ss_pred HHhCCCcccCHHHHHcCcc
Confidence 99999 799998843
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.4e-48 Score=355.92 Aligned_cols=238 Identities=17% Similarity=0.133 Sum_probs=188.8
Q ss_pred CCCCccceeeee--cceeeeeecCCChhh------HHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHH
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLG------ETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLA 73 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~------~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 73 (423)
|+||.||++.+. +..+|+|++...... ...+.+|+.++++++|||||++++++.+++..|+||||+.|+++.
T Consensus 9 G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~~~~~~~~ 88 (299)
T d1ua2a_ 9 GQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEV 88 (299)
T ss_dssp ETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECCSEEHHH
T ss_pred CcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhhhcchHHh
Confidence 899999999874 778999987554322 246889999999999999999999999999999999999998777
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcc
Q 014484 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLA 149 (423)
Q Consensus 74 ~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~ 149 (423)
.++. ....+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++..... ....||+.
T Consensus 89 ~~~~--~~~~l~~~~~~~~~~qil~aL~~lH~~~-iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~~~~~~gt~~ 165 (299)
T d1ua2a_ 89 IIKD--NSLVLTPSHIKAYMLMTLQGLEYLHQHW-ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRW 165 (299)
T ss_dssp HHTT--CCSSCCSSHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCCCSCCCCT
T ss_pred hhhh--cccCCCHHHHHHHHHHHHHHHHHhhccc-eecccCCcceEEecCCCccccccCccccccCCCcccccceecChh
Confidence 6653 3567999999999999999999999999 999999999999999999999999999766543 33568999
Q ss_pred cCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccc--------------cccC---CC--
Q 014484 150 FTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS--------------ALEG---HF-- 209 (423)
Q Consensus 150 y~aPE~~~~~-~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~---~~-- 209 (423)
|+|||++.+. .++.++|||||||++|||+||.+||..................+ .... ..
T Consensus 166 y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (299)
T d1ua2a_ 166 YRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPL 245 (299)
T ss_dssp TCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCH
T ss_pred hccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhhccCCCCCh
Confidence 9999988754 57999999999999999999998887643222111111000000 0000 00
Q ss_pred ---ChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHH
Q 014484 210 ---SNDEGTELVRLASRCLQSEARERPNAKSLVISL 242 (423)
Q Consensus 210 ---~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l 242 (423)
....++++.+||.+||+.||++|||++|+++|-
T Consensus 246 ~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~Hp 281 (299)
T d1ua2a_ 246 HHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMK 281 (299)
T ss_dssp HHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSG
T ss_pred HHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCCH
Confidence 123467899999999999999999999999874
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.8e-48 Score=359.09 Aligned_cols=231 Identities=17% Similarity=0.240 Sum_probs=195.3
Q ss_pred CCCCccceeeee--cceeeeeecCCCh----hhHHHHHHHHHHHh-cCCCCCccceEeEEEeCCceeEEEecCCCCCHHh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD----LGETLNLEEAKAVG-NLRSERLANLIGCCYEADERLLVAEFMPNETLAK 74 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~----~~~~~~~~E~~~l~-~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (423)
|+||.||++.+. +..+++|++.+.. .....+..|+.++. .++|||||++++++.+++..|+||||++||+|.+
T Consensus 13 G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yivmEy~~~g~L~~ 92 (320)
T d1xjda_ 13 GSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMY 92 (320)
T ss_dssp CSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHH
T ss_pred CCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEEEeecCCCcHHH
Confidence 899999999984 7888999886432 23456777887765 6899999999999999999999999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCccc
Q 014484 75 HLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAF 150 (423)
Q Consensus 75 ~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y 150 (423)
++.. .+.+++.++..++.||+.||.|||+++ |+||||||+|||++.+|++||+|||+++..... ....||+.|
T Consensus 93 ~i~~--~~~~~e~~~~~~~~qi~~al~ylH~~~-iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y 169 (320)
T d1xjda_ 93 HIQS--CHKFDLSRATFYAAEIILGLQFLHSKG-IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDY 169 (320)
T ss_dssp HHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCSCGGG
T ss_pred Hhhc--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCcccceeecCCCceeccccchhhhcccccccccccCCCCCc
Confidence 9964 457999999999999999999999999 999999999999999999999999999865432 335789999
Q ss_pred CCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhcccCcC
Q 014484 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230 (423)
Q Consensus 151 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 230 (423)
+|||++.+..++.++|||||||++|+|++|..||.+........ .+.. ....++..+++++.+||.+||+.||.
T Consensus 170 ~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~----~i~~--~~~~~p~~~s~~~~dli~~~L~~dP~ 243 (320)
T d1xjda_ 170 IAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFH----SIRM--DNPFYPRWLEKEAKDLLVKLFVREPE 243 (320)
T ss_dssp CCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH----HHHH--CCCCCCTTSCHHHHHHHHHHSCSSGG
T ss_pred CCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHH----HHHc--CCCCCCccCCHHHHHHHHHhcccCCC
Confidence 99999999999999999999999999999999997653322211 1111 12345666788999999999999999
Q ss_pred CCCCHH-HHHHH
Q 014484 231 ERPNAK-SLVIS 241 (423)
Q Consensus 231 ~Rps~~-~vl~~ 241 (423)
+|||+. ++++|
T Consensus 244 ~R~s~~~~l~~h 255 (320)
T d1xjda_ 244 KRLGVRGDIRQH 255 (320)
T ss_dssp GSBTTBSCGGGS
T ss_pred CCcCHHHHHHhC
Confidence 999995 78766
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.4e-47 Score=351.51 Aligned_cols=240 Identities=16% Similarity=0.212 Sum_probs=198.7
Q ss_pred CCCCccceeeee-------cceeeeeecCCCh--hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCH
Q 014484 2 GGRCSKFSICWF-------HCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72 (423)
Q Consensus 2 G~~g~v~~~~~~-------~~~~~~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 72 (423)
||||.||++.+. +..||+|++.... .....|.+|++++++++|||||+++++|..++..++||||+++|+|
T Consensus 31 G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~~~g~l 110 (308)
T d1p4oa_ 31 GSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDL 110 (308)
T ss_dssp CSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEEECCTTCBH
T ss_pred CCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCceeEEEeecCCCCH
Confidence 999999999885 3568888875433 3455789999999999999999999999999999999999999999
Q ss_pred HhhhccC--------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC---
Q 014484 73 AKHLFHW--------ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--- 141 (423)
Q Consensus 73 ~~~i~~~--------~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--- 141 (423)
.+++... .-..+++..+..++.|++.||.|||+++ |+||||||+|||++.++++||+|||+++.....
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~-ivHrDlk~~NiLld~~~~~Kl~DFGla~~~~~~~~~ 189 (308)
T d1p4oa_ 111 KSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 189 (308)
T ss_dssp HHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGCE
T ss_pred HHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCC-eeeceEcCCceeecCCceEEEeecccceeccCCcce
Confidence 9988532 1235789999999999999999999999 999999999999999999999999999865432
Q ss_pred ---CccccCcccCCccccccCCCCCCcceehhHHHHHHHhhCC-CCCCchhhHHhhhchhhhhccccccCCCChhHHHHH
Q 014484 142 ---KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGK-HIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTEL 217 (423)
Q Consensus 142 ---~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 217 (423)
....+|+.|+|||.+.+..++.++|||||||++|||+||. +|+.... .......+........+..+++++
T Consensus 190 ~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~-----~~~~~~~i~~~~~~~~p~~~~~~l 264 (308)
T d1p4oa_ 190 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS-----NEQVLRFVMEGGLLDKPDNCPDML 264 (308)
T ss_dssp EGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC-----HHHHHHHHHTTCCCCCCTTCCHHH
T ss_pred eeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHHhCCCCCCcccchHHH
Confidence 2235789999999999999999999999999999999996 4444321 112222222233344566778899
Q ss_pred HHHHHHhcccCcCCCCCHHHHHHHHHhhhh
Q 014484 218 VRLASRCLQSEARERPNAKSLVISLMSLQK 247 (423)
Q Consensus 218 ~~li~~cl~~dp~~Rps~~~vl~~l~~~~~ 247 (423)
.+++.+||+.||++|||+++|+++|++..+
T Consensus 265 ~~li~~cl~~~P~~RPs~~~il~~L~~~~~ 294 (308)
T d1p4oa_ 265 FELMRMCWQYNPKMRPSFLEIISSIKEEME 294 (308)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred HHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 999999999999999999999999877644
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.5e-47 Score=352.84 Aligned_cols=243 Identities=19% Similarity=0.276 Sum_probs=201.7
Q ss_pred CCCCccceeeeec-------ceeeeeecCCC--hhhHHHHHHHHHHHhcC-CCCCccceEeEEEeCCceeEEEecCCCCC
Q 014484 2 GGRCSKFSICWFH-------CHLKSSVLESS--DLGETLNLEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNET 71 (423)
Q Consensus 2 G~~g~v~~~~~~~-------~~~~~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 71 (423)
||||.||++.+.+ ..+|+|.+... ......|.+|+.++..+ +|||||+++++|.+++..++|||||++|+
T Consensus 34 G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~~~lvmE~~~~g~ 113 (311)
T d1t46a_ 34 GAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGD 113 (311)
T ss_dssp CSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEE
T ss_pred cCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCEEEEEEEcCCCCC
Confidence 9999999998753 45788877543 34466789999999999 79999999999999999999999999999
Q ss_pred HHhhhccCC----------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEcccccc
Q 014484 72 LAKHLFHWE----------------TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLM 135 (423)
Q Consensus 72 L~~~i~~~~----------------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~ 135 (423)
|.+++.... ...+++..+..++.||+.||.|||+++ ++||||||+||+++.++.++++|||++
T Consensus 114 l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~-ivHrDLKp~NIl~~~~~~~ki~DfG~~ 192 (311)
T d1t46a_ 114 LLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN-CIHRDLAARNILLTHGRITKICDFGLA 192 (311)
T ss_dssp HHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEETTTEEEECCCGGG
T ss_pred HHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccccccccccccCcccccccchh
Confidence 999986432 236899999999999999999999999 999999999999999999999999999
Q ss_pred ccCCCCC------ccccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCC
Q 014484 136 KNSRDGK------SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHF 209 (423)
Q Consensus 136 ~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (423)
+...... ...||+.|+|||.+.+..++.++|||||||++|||+|++.|+.... .....+...+........
T Consensus 193 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~---~~~~~~~~~i~~~~~~~~ 269 (311)
T d1t46a_ 193 RDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM---PVDSKFYKMIKEGFRMLS 269 (311)
T ss_dssp SCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC---CSSHHHHHHHHHTCCCCC
T ss_pred eeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCC---CHHHHHHHHHhcCCCCCC
Confidence 8665432 2457899999999999999999999999999999999554443221 111223334444555556
Q ss_pred ChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhhh
Q 014484 210 SNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248 (423)
Q Consensus 210 ~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~~~~ 248 (423)
+..+++++.+||.+||+.||.+|||+++|++.|++....
T Consensus 270 ~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i~~ 308 (311)
T d1t46a_ 270 PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 308 (311)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhhcc
Confidence 667788999999999999999999999999999876544
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.2e-47 Score=351.38 Aligned_cols=244 Identities=15% Similarity=0.186 Sum_probs=192.2
Q ss_pred CCCCccceeeeecceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCC----ceeEEEecCCCCCHHhhhc
Q 014484 2 GGRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEAD----ERLLVAEFMPNETLAKHLF 77 (423)
Q Consensus 2 G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----~~~lv~e~~~~~~L~~~i~ 77 (423)
||||.||++.+.+..|++|++.........+..|+..+.+++|||||+++++|.+.+ .+|+||||+++|+|.++++
T Consensus 14 G~fg~Vy~~~~~g~~vAvK~~~~~~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~ 93 (303)
T d1vjya_ 14 GRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN 93 (303)
T ss_dssp CSSSEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHH
T ss_pred CCCeEEEEEEECCEEEEEEEECccchhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEEecccCCCHHHHHh
Confidence 999999999999999999998766544444555666677889999999999998765 4789999999999999996
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHc--------CCCeeeccCCCCCeeecCCCCeEEccccccccCCCC--------
Q 014484 78 HWETQPMKWAMRLRVALYLAQALEYCSS--------KGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-------- 141 (423)
Q Consensus 78 ~~~~~~~~~~~~~~i~~qi~~~l~~lH~--------~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-------- 141 (423)
+ ..+++..++.++.|++.||.|||+ ++ |+||||||+||||+.++.+||+|||+++.....
T Consensus 94 ~---~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~-IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~~~~~~~~~~~~ 169 (303)
T d1vjya_ 94 R---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAP 169 (303)
T ss_dssp H---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE-EECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEECC--
T ss_pred c---CCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCC-eeccccCccceEEcCCCCeEEEecCccccccCCCcceeccc
Confidence 4 369999999999999999999996 57 999999999999999999999999998865432
Q ss_pred CccccCcccCCccccccCC------CCCCcceehhHHHHHHHhhCCCCCCchhhHHh----------h-hchhhhhcccc
Q 014484 142 KSYSTNLAFTPPEYMRTGR------VTPESVVYSFGTMLLDLLSGKHIPPSHALDLI----------R-SKNFLLLMDSA 204 (423)
Q Consensus 142 ~~~~~t~~y~aPE~~~~~~------~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~----------~-~~~~~~~~~~~ 204 (423)
....||+.|+|||++.+.. ++.++|||||||++|||+||..|+........ . ...........
T Consensus 170 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (303)
T d1vjya_ 170 NHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQK 249 (303)
T ss_dssp --CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSC
T ss_pred cceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccchHHHHHHHHhccc
Confidence 2356899999999987542 67789999999999999999876532210000 0 00011111222
Q ss_pred ccCCCC-----hhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHHhhhhhc
Q 014484 205 LEGHFS-----NDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEA 249 (423)
Q Consensus 205 ~~~~~~-----~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~~~~~~~ 249 (423)
..+.++ ...+..+.+++.+||+.||++|||+.+|+++|.++.++.
T Consensus 250 ~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~~ 299 (303)
T d1vjya_ 250 LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp CCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred cCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHhc
Confidence 222222 234567999999999999999999999999999987653
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.2e-46 Score=344.49 Aligned_cols=238 Identities=16% Similarity=0.202 Sum_probs=188.9
Q ss_pred CCCCccceeeee--cceeeeeecCCChh---hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDL---GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
|+||.||++.+. +..+|+|++..... ....+.+|++++++++|||||++++++.+++..|+||||+.+ ++..++
T Consensus 13 G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e~~~~-~~~~~~ 91 (298)
T d1gz8a_ 13 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM 91 (298)
T ss_dssp CSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSE-EHHHHH
T ss_pred CcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEeecCC-chhhhh
Confidence 999999999985 77899998855432 356789999999999999999999999999999999999976 555555
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccCC
Q 014484 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTP 152 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~a 152 (423)
.......+++..+..++.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++..... ....||+.|+|
T Consensus 92 ~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~-IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~a 170 (298)
T d1gz8a_ 92 DASALTGIPLPLIKSYLFQLLQGLAFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 170 (298)
T ss_dssp HHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSBCTTCCBCCCTTCC
T ss_pred hhhcccCCCHHHHHHHHHHHHHHHHHhhcCC-EEccccCchheeecccCcceeccCCcceeccCCcccceeecccceeee
Confidence 4445667999999999999999999999999 999999999999999999999999999765433 33578999999
Q ss_pred ccccccCC-CCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhcc------------ccccCCC----------
Q 014484 153 PEYMRTGR-VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD------------SALEGHF---------- 209 (423)
Q Consensus 153 PE~~~~~~-~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~---------- 209 (423)
||.+.... ++.++||||+||++|+|++|..||.................. ......+
T Consensus 171 pE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (298)
T d1gz8a_ 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSK 250 (298)
T ss_dssp HHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHH
T ss_pred hhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccccccccccccccccccccchhh
Confidence 99877665 578999999999999999999998754322111110000000 0000000
Q ss_pred -ChhHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014484 210 -SNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (423)
Q Consensus 210 -~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~ 241 (423)
...+++++.+|+.+||+.||++|||++|+++|
T Consensus 251 ~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H 283 (298)
T d1gz8a_ 251 VVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 283 (298)
T ss_dssp HSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hccCCCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 12346789999999999999999999999987
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.4e-47 Score=346.32 Aligned_cols=226 Identities=19% Similarity=0.262 Sum_probs=189.1
Q ss_pred CCCCccceeeee--cceeeeeecCCChh-------hHHHHHHHHHHHhcCC--CCCccceEeEEEeCCceeEEEecCCC-
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDL-------GETLNLEEAKAVGNLR--SERLANLIGCCYEADERLLVAEFMPN- 69 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~-------~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~lv~e~~~~- 69 (423)
|+||.||++.+. +..+++|++..... ....+.+|+.++++++ |||||++++++.+.+..++||||+.+
T Consensus 15 G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~~~lv~e~~~~~ 94 (273)
T d1xwsa_ 15 GGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPV 94 (273)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEEECCSSE
T ss_pred CCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCeEEEEEEeccCc
Confidence 899999999985 67888888754321 1234678999999996 89999999999999999999999976
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecC-CCCeEEccccccccCCCC--Ccccc
Q 014484 70 ETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK-DGNPRLSSFGLMKNSRDG--KSYST 146 (423)
Q Consensus 70 ~~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~-~~~~kl~Dfg~~~~~~~~--~~~~~ 146 (423)
+++.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++. ++.+||+|||+++..... .+..|
T Consensus 95 ~~l~~~~~~--~~~l~e~~~~~~~~qi~~al~~lH~~~-iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~~~~~~~~~~G 171 (273)
T d1xwsa_ 95 QDLFDFITE--RGALQEELARSFFWQVLEAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDG 171 (273)
T ss_dssp EEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEETTTTEEEECCCTTCEECCSSCBCCCCS
T ss_pred chHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CccccCcccceEEecCCCeEEECccccceeccccccccccc
Confidence 688888754 457999999999999999999999999 999999999999985 478999999999865543 45679
Q ss_pred CcccCCccccccCCC-CCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHHhc
Q 014484 147 NLAFTPPEYMRTGRV-TPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCL 225 (423)
Q Consensus 147 t~~y~aPE~~~~~~~-~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 225 (423)
|+.|+|||++.+..+ +.++|||||||++|+|++|..||..... . .. ....++..+|+++.+||.+||
T Consensus 172 T~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~-------i---~~--~~~~~~~~~s~~~~~li~~~L 239 (273)
T d1xwsa_ 172 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-------I---IR--GQVFFRQRVSSECQHLIRWCL 239 (273)
T ss_dssp CGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-------H---HH--CCCCCSSCCCHHHHHHHHHHT
T ss_pred CCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCchH-------H---hh--cccCCCCCCCHHHHHHHHHHc
Confidence 999999999987765 6779999999999999999999876421 1 00 112344556788999999999
Q ss_pred ccCcCCCCCHHHHHHHH
Q 014484 226 QSEARERPNAKSLVISL 242 (423)
Q Consensus 226 ~~dp~~Rps~~~vl~~l 242 (423)
+.||++|||++|+++|-
T Consensus 240 ~~dp~~R~s~~eil~hp 256 (273)
T d1xwsa_ 240 ALRPSDRPTFEEIQNHP 256 (273)
T ss_dssp CSSGGGSCCHHHHHTSG
T ss_pred cCCHhHCcCHHHHhcCH
Confidence 99999999999999874
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=2.4e-45 Score=336.94 Aligned_cols=237 Identities=14% Similarity=0.189 Sum_probs=189.6
Q ss_pred CCCCccceeeee-cceeeeeecCCChh---hHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhhc
Q 014484 2 GGRCSKFSICWF-HCHLKSSVLESSDL---GETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77 (423)
Q Consensus 2 G~~g~v~~~~~~-~~~~~~~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~ 77 (423)
|+||.||++.+. +..+|+|++..... ....+.+|+.+|++++|||||++++++..++..+++||++.++.+..+..
T Consensus 13 G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~~~~~~~~~~~~ 92 (286)
T d1ob3a_ 13 GTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDV 92 (286)
T ss_dssp ETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSEEHHHHHHT
T ss_pred CCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEeehhhhHHHHHh
Confidence 899999999875 67899998865432 25688999999999999999999999999999999999998877776664
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC----CccccCcccCCc
Q 014484 78 HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KSYSTNLAFTPP 153 (423)
Q Consensus 78 ~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----~~~~~t~~y~aP 153 (423)
..+.+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||.+...... ....+++.|+||
T Consensus 93 --~~~~l~~~~~~~i~~qi~~~L~~LH~~~-IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~y~~p 169 (286)
T d1ob3a_ 93 --CEGGLESVTAKSFLLQLLNGIAYCHDRR-VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAP 169 (286)
T ss_dssp --STTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---------CCCTTCCH
T ss_pred --hcCCcchhhhHHHHHHHHHHHHHhccCc-EEecCCCCceeeEcCCCCEEecccccceecccCccccceecccchhhhH
Confidence 3567999999999999999999999999 999999999999999999999999998765432 334688999999
Q ss_pred cccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhc-----------------------cccccCCC
Q 014484 154 EYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLM-----------------------DSALEGHF 209 (423)
Q Consensus 154 E~~~~~-~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~ 209 (423)
|.+.+. .++.++|||||||++|||++|+.||................. ........
T Consensus 170 E~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (286)
T d1ob3a_ 170 DVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESF 249 (286)
T ss_dssp HHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGT
T ss_pred HHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhcccccccccCcchhhh
Confidence 998754 479999999999999999999999865422211111000000 00000112
Q ss_pred ChhHHHHHHHHHHHhcccCcCCCCCHHHHHHH
Q 014484 210 SNDEGTELVRLASRCLQSEARERPNAKSLVIS 241 (423)
Q Consensus 210 ~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~ 241 (423)
....++++.+||.+||+.||++|||++|+++|
T Consensus 250 ~~~~s~~~~dli~~~L~~dP~~R~s~~ell~H 281 (286)
T d1ob3a_ 250 LKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (286)
T ss_dssp CCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 23456889999999999999999999999977
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-45 Score=340.87 Aligned_cols=239 Identities=15% Similarity=0.140 Sum_probs=186.6
Q ss_pred CCCCccceeeee---cceeeeeecCCCh---hhHHHHHHHHHHHhcC---CCCCccceEeEEEeC-----CceeEEEecC
Q 014484 2 GGRCSKFSICWF---HCHLKSSVLESSD---LGETLNLEEAKAVGNL---RSERLANLIGCCYEA-----DERLLVAEFM 67 (423)
Q Consensus 2 G~~g~v~~~~~~---~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~-----~~~~lv~e~~ 67 (423)
|+||.||++.+. +..+|+|++.... .....+.+|+.+++.| +||||++++++|... ...+++|||+
T Consensus 18 G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~~~~~~~~~~e~~ 97 (305)
T d1blxa_ 18 GAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV 97 (305)
T ss_dssp ETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEEEEECC
T ss_pred ccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccccCceEEEEEEec
Confidence 899999999874 4457888764322 2234567888887766 799999999999642 3578999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC---Ccc
Q 014484 68 PNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSY 144 (423)
Q Consensus 68 ~~~~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~ 144 (423)
.++++.... ......+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++..... ...
T Consensus 98 ~~~~~~~~~-~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~-ivHrDiKp~NILi~~~~~~kl~dfg~~~~~~~~~~~~~~ 175 (305)
T d1blxa_ 98 DQDLTTYLD-KVPEPGVPTETIKDMMFQLLRGLDFLHSHR-VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSV 175 (305)
T ss_dssp SCBHHHHHH-HSCTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECSCCSCCCCCGGGGGCCC
T ss_pred cCCchhhhh-hccCCCCCHHHHHHHHHHHHHHHHHHHhCC-EEecCCCccEEEEcCCCCeeecchhhhhhhcccccCCCc
Confidence 987665444 335667999999999999999999999999 999999999999999999999999998765433 456
Q ss_pred ccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhc---------------------cc
Q 014484 145 STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLM---------------------DS 203 (423)
Q Consensus 145 ~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~---------------------~~ 203 (423)
.||+.|+|||++.+.+++.++||||+||++|||++|..||................. ..
T Consensus 176 ~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (305)
T d1blxa_ 176 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSA 255 (305)
T ss_dssp CCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCC
T ss_pred ccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcccccccchhhhhccccc
Confidence 789999999999999999999999999999999999999876432211111100000 00
Q ss_pred cccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHH
Q 014484 204 ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISL 242 (423)
Q Consensus 204 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l 242 (423)
.....+....++++.+||.+||++||++|||++|+++|.
T Consensus 256 ~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~Hp 294 (305)
T d1blxa_ 256 QPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHP 294 (305)
T ss_dssp CCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSG
T ss_pred cchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCh
Confidence 001112334578899999999999999999999999873
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.2e-44 Score=338.32 Aligned_cols=236 Identities=16% Similarity=0.186 Sum_probs=186.9
Q ss_pred CCCCccceeeee--cceeeeeecCCCh---hhHHHHHHHHHHHhcCCCCCccceEeEEEeCC------ceeEEEecCCCC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEAD------ERLLVAEFMPNE 70 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------~~~lv~e~~~~~ 70 (423)
|+||.||++.+. +..+|+|++.... ...+.+.+|+++|+.++|||||+++++|...+ .+|+||||+ +.
T Consensus 29 G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~-~~ 107 (346)
T d1cm8a_ 29 GAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GT 107 (346)
T ss_dssp ----CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEEECC-SE
T ss_pred CCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccceEEEEEecc-cc
Confidence 999999999985 7889999886533 33567889999999999999999999998765 469999999 66
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-CccccCcc
Q 014484 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSYSTNLA 149 (423)
Q Consensus 71 ~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~~t~~ 149 (423)
+|..+++ .+.+++..+..++.||+.||.|||++| |+||||||+|||++.++.+|++|||+++..... ....||+.
T Consensus 108 ~l~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~~-IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~ 183 (346)
T d1cm8a_ 108 DLGKLMK---HEKLGEDRIQFLVYQMLKGLRYIHAAG-IIHRDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVVTRW 183 (346)
T ss_dssp EHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECCSSCCSSCSCGG
T ss_pred cHHHHHH---hccccHHHHHHHHHHHHHHHHHHHhCC-CcccccCcchhhcccccccccccccceeccCCcccccccccc
Confidence 8888774 356999999999999999999999999 999999999999999999999999999877654 44678999
Q ss_pred cCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhch----------------------hhhhccccc-
Q 014484 150 FTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKN----------------------FLLLMDSAL- 205 (423)
Q Consensus 150 y~aPE~~~~~-~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~----------------------~~~~~~~~~- 205 (423)
|+|||.+.+. .++.++||||+||++|+|++|..||............ .........
T Consensus 184 y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (346)
T d1cm8a_ 184 YRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEK 263 (346)
T ss_dssp GCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCC
T ss_pred ccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhhhhhccCCcccc
Confidence 9999998764 4789999999999999999999988654211110000 000000000
Q ss_pred --cCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHH
Q 014484 206 --EGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISL 242 (423)
Q Consensus 206 --~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l 242 (423)
........++++.+||.+||+.||.+|||++++++|-
T Consensus 264 ~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp 302 (346)
T d1cm8a_ 264 KDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHP 302 (346)
T ss_dssp CCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSG
T ss_pred cchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcCh
Confidence 0112234567899999999999999999999999984
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.6e-44 Score=336.75 Aligned_cols=237 Identities=16% Similarity=0.165 Sum_probs=184.7
Q ss_pred CCCCccceeeee--cceeeeeecCCCh--hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCc----eeEEEecCCCCCHH
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADE----RLLVAEFMPNETLA 73 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~----~~lv~e~~~~~~L~ 73 (423)
|+||.||++... +..+|+|++.... ...+.+.+|+.+|++++||||+++++++..... .+++++++.||+|.
T Consensus 19 G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~l~~~~~~g~L~ 98 (345)
T d1pmea_ 19 GAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLY 98 (345)
T ss_dssp --CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEECCCEEHH
T ss_pred ccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEEEEEeecCCchh
Confidence 899999999875 7889999886543 345678999999999999999999999976542 34555667789999
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-------Ccccc
Q 014484 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-------KSYST 146 (423)
Q Consensus 74 ~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-------~~~~~ 146 (423)
+++.. +.+++..+..++.||+.||+|||++| ||||||||+|||++.++.+||+|||+++..... ....|
T Consensus 99 ~~l~~---~~l~~~~i~~i~~qil~al~yLH~~~-iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~g 174 (345)
T d1pmea_ 99 KLLKT---QHLSNDHICYFLYQILRGLKYIHSAN-VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 174 (345)
T ss_dssp HHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCS
T ss_pred hhhhc---CCCCHHHHHHHHHHHHHHHHHHHHCC-CcCCCCCcceEEECCCCCEEEcccCceeeccCCCccceeeccccc
Confidence 99953 46999999999999999999999999 999999999999999999999999998755432 33468
Q ss_pred CcccCCcccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhcc--------------------ccc
Q 014484 147 NLAFTPPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD--------------------SAL 205 (423)
Q Consensus 147 t~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~--------------------~~~ 205 (423)
|+.|+|||.+.. ..++.++||||+||++|+|++|..||.................. ...
T Consensus 175 t~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (345)
T d1pmea_ 175 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPH 254 (345)
T ss_dssp CGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCC
T ss_pred cceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhhhhcccccCCc
Confidence 999999999854 45789999999999999999999998654221111111000000 000
Q ss_pred cCC-----CChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHH
Q 014484 206 EGH-----FSNDEGTELVRLASRCLQSEARERPNAKSLVISL 242 (423)
Q Consensus 206 ~~~-----~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l 242 (423)
... .....++++.+|+.+||+.||.+|||++++++|-
T Consensus 255 ~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hp 296 (345)
T d1pmea_ 255 KNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 296 (345)
T ss_dssp CCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSG
T ss_pred cCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcCH
Confidence 000 1123457899999999999999999999999874
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=6.8e-44 Score=327.76 Aligned_cols=244 Identities=12% Similarity=0.061 Sum_probs=195.5
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHHhcCCC-CCccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNLRS-ERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
||||.||++.+. +..+|+|++.... ....+.+|++.+..|+| +|++.+++++..+...++||||+ +++|.+++..
T Consensus 16 G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~-~~~l~~~~~~ 93 (293)
T d1csna_ 16 GSFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDL 93 (293)
T ss_dssp CSSCEEEEEEETTTTEEEEEEEEECCT-TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHH
T ss_pred CCCeEEEEEEECCCCCEEEEEEEcccc-CcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEec-CCCHHHHHHh
Confidence 999999999975 6788888765443 33467889999999965 89999999999999999999999 6799998864
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecC-----CCCeEEccccccccCCC-----------CC
Q 014484 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK-----DGNPRLSSFGLMKNSRD-----------GK 142 (423)
Q Consensus 79 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~-----~~~~kl~Dfg~~~~~~~-----------~~ 142 (423)
.+..++..++..++.|++.||.|||++| |+||||||+|||++. ++.++|+|||+++.... ..
T Consensus 94 -~~~~~~~~~~~~i~~q~~~~l~~lH~~g-iiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~ 171 (293)
T d1csna_ 94 -CGRKFSVKTVAMAAKQMLARVQSIHEKS-LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKK 171 (293)
T ss_dssp -TTTCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCC
T ss_pred -hccchhhHHHHHHHHHHHHHHHHHHHCC-ceeccCCccceeecCcccccCCceEEcccceeEEcccCccccceeecccC
Confidence 4557999999999999999999999999 999999999999964 56899999999986432 23
Q ss_pred ccccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHH--hhhchhhhhccccccCCCChhHHHHHHHH
Q 014484 143 SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDL--IRSKNFLLLMDSALEGHFSNDEGTELVRL 220 (423)
Q Consensus 143 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 220 (423)
...||+.|||||++.+..++.++|||||||++|||+||..||....... .....+............+..+|+++.++
T Consensus 172 ~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~i 251 (293)
T d1csna_ 172 NLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKY 251 (293)
T ss_dssp CCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHH
T ss_pred ceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCChHHhcCCCCHHHHHH
Confidence 4568999999999999999999999999999999999999986432110 00111111111111112234456789999
Q ss_pred HHHhcccCcCCCCCHHHHHHHHHhhhhhc
Q 014484 221 ASRCLQSEARERPNAKSLVISLMSLQKEA 249 (423)
Q Consensus 221 i~~cl~~dp~~Rps~~~vl~~l~~~~~~~ 249 (423)
+..|+..+|++||+++.+.+.|..+.+..
T Consensus 252 i~~~~~~~~~~rP~y~~l~~~l~~~~~~~ 280 (293)
T d1csna_ 252 MHYARNLAFDATPDYDYLQGLFSKVLERL 280 (293)
T ss_dssp HHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred HHHHhcCCcccCcCHHHHHHHHHHHHHHc
Confidence 99999999999999999998888876553
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.8e-44 Score=337.97 Aligned_cols=237 Identities=19% Similarity=0.163 Sum_probs=183.5
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHHhcCCCCCccceEeEEEeCC------ceeEEEecCCCCCHH
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEAD------ERLLVAEFMPNETLA 73 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------~~~lv~e~~~~~~L~ 73 (423)
|+||.||++.+. +..+|+|++..... ...+|+++|++++||||++++++|.... .+++|||||+++.+.
T Consensus 31 G~fg~Vy~a~~~~~~~~vAiK~i~~~~~---~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~Ey~~~~~~~ 107 (350)
T d1q5ka_ 31 GSFGVVYQAKLCDSGELVAIKKVLQDKR---FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR 107 (350)
T ss_dssp ETTEEEEEEEETTTCCEEEEEEEECCSS---SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEEEEECCSEEHHH
T ss_pred CcCeEEEEEEECCCCCEEEEEEECccch---HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEEEEeccCCccHH
Confidence 899999999985 77789988765542 3347999999999999999999996532 368999999875433
Q ss_pred hhhc-cCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCC-CeEEccccccccCCCC---CccccCc
Q 014484 74 KHLF-HWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG-NPRLSSFGLMKNSRDG---KSYSTNL 148 (423)
Q Consensus 74 ~~i~-~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~-~~kl~Dfg~~~~~~~~---~~~~~t~ 148 (423)
.... ......+++.++..++.||+.||+|||++| |+||||||+|||++.++ .+||+|||+++..... .+..||+
T Consensus 108 ~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~-IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~ 186 (350)
T d1q5ka_ 108 VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 186 (350)
T ss_dssp HHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECTTTCCEEECCCTTCEECCTTSCCCSCCSCT
T ss_pred HHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcC-CcccCCCcceEEEecCCCceeEecccchhhccCCcccccccccc
Confidence 3321 124567999999999999999999999999 99999999999999775 8999999999866543 4457899
Q ss_pred ccCCcccccc-CCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchh-----------hhhccc------------c
Q 014484 149 AFTPPEYMRT-GRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNF-----------LLLMDS------------A 204 (423)
Q Consensus 149 ~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~-----------~~~~~~------------~ 204 (423)
.|+|||.+.+ ..++.++||||+||++|||++|..||............. ...... .
T Consensus 187 ~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (350)
T d1q5ka_ 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHP 266 (350)
T ss_dssp TSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---CCCCCCCCCCC
T ss_pred cccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchhhccccccccCc
Confidence 9999998765 468999999999999999999999987543221111100 000000 0
Q ss_pred ccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHH
Q 014484 205 LEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISL 242 (423)
Q Consensus 205 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l 242 (423)
.........++++.+||.+||++||++|||+.|+++|-
T Consensus 267 ~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp 304 (350)
T d1q5ka_ 267 WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 304 (350)
T ss_dssp GGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred hhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCH
Confidence 01112234578899999999999999999999999884
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.5e-43 Score=327.42 Aligned_cols=239 Identities=17% Similarity=0.143 Sum_probs=183.9
Q ss_pred CCCCccceeeee--cceeeeeecCCCh---hhHHHHHHHHHHHhcCCCCCccceEeEEEe--------CCceeEEEecCC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYE--------ADERLLVAEFMP 68 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--------~~~~~lv~e~~~ 68 (423)
|+||.||++.+. +..+|+|++.... .....+.+|+++|+.++||||+++++++.. .+..|+||||+.
T Consensus 21 G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~~~~~iv~e~~~ 100 (318)
T d3blha1 21 GTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCE 100 (318)
T ss_dssp CSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC----------CEEEEEECCC
T ss_pred CcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccccCceEEEEEeccC
Confidence 999999999985 7788999875443 235678899999999999999999999865 345799999998
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCC--------
Q 014484 69 NETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD-------- 140 (423)
Q Consensus 69 ~~~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~-------- 140 (423)
++++..... ....+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 101 ~~~~~~~~~--~~~~~~~~~~~~i~~qil~~l~~lH~~~-ivHrDlKp~NILl~~~~~~kl~dfg~~~~~~~~~~~~~~~ 177 (318)
T d3blha1 101 HDLAGLLSN--VLVKFTLSEIKRVMQMLLNGLYYIHRNK-ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR 177 (318)
T ss_dssp EEHHHHHTC--TTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCTTCEECCC-----CCC
T ss_pred CCccchhhh--cccccccHHHHHHHHHHHHHHHHhccCC-EEecCcCchheeecCCCcEEeeecceeeeccccccccccc
Confidence 876665543 4567999999999999999999999999 99999999999999999999999999975542
Q ss_pred CCccccCcccCCccccccC-CCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhc--cccccC----------
Q 014484 141 GKSYSTNLAFTPPEYMRTG-RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLM--DSALEG---------- 207 (423)
Q Consensus 141 ~~~~~~t~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~---------- 207 (423)
.....||+.|+|||++.+. .++.++||||+||++|||++|..||.+............... ......
T Consensus 178 ~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 257 (318)
T d3blha1 178 YTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEK 257 (318)
T ss_dssp CCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTCCCC-----
T ss_pred ccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChhhccccchhhhhhh
Confidence 2234689999999998765 589999999999999999999988865322111111000000 000000
Q ss_pred -------CCC-------hhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 208 -------HFS-------NDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 208 -------~~~-------~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
..+ ...++++.+||.+||+.||++|||++|+++|-.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hpf 307 (318)
T d3blha1 258 LELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDF 307 (318)
T ss_dssp --CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGG
T ss_pred hcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcChh
Confidence 000 012457889999999999999999999998854
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.6e-43 Score=326.86 Aligned_cols=241 Identities=15% Similarity=0.113 Sum_probs=186.9
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHHhcCCCCC-ccceEeEEEeCCceeEEEecCCCCCHHhhhcc
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNLRSER-LANLIGCCYEADERLLVAEFMPNETLAKHLFH 78 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 78 (423)
|+||.||++.+. +..+|+|++.... ....+..|+++++.++|+| |+.+..++.+++..++||||+. ++|...+..
T Consensus 18 G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~~-~~l~~~~~~ 95 (299)
T d1ckia_ 18 GSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLG-PSLEDLFNF 95 (299)
T ss_dssp CSSSEEEEEEETTTTEEEEEEEEESCT-TSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECCC-CBHHHHHHH
T ss_pred CCCcEEEEEEECCCCCEEEEEEEchhc-cCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEEcC-Cchhhhhhh
Confidence 999999999985 6788888766544 3346789999999998766 5555666677788899999994 577776643
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecC---CCCeEEccccccccCCCC-----------Ccc
Q 014484 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDK---DGNPRLSSFGLMKNSRDG-----------KSY 144 (423)
Q Consensus 79 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~---~~~~kl~Dfg~~~~~~~~-----------~~~ 144 (423)
..+.+++..+..++.|++.||+|||+++ |+||||||+|||++. +..++|+|||+++..... ...
T Consensus 96 -~~~~~~~~~~~~~~~qi~~~l~~lH~~~-iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~ 173 (299)
T d1ckia_ 96 -CSRKFSLKTVLLLADQMISRIEYIHSKN-FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNL 173 (299)
T ss_dssp -TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTCCBCCCCBCCSC
T ss_pred -ccCCCcHHHHHHHHHHHHHHHHHHHHCC-eeeccCCHhhccccccCCCceeeeeccCcceeccccccccceeccccCCc
Confidence 4567999999999999999999999999 999999999999853 457999999999865432 234
Q ss_pred ccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccc---cccCCCChhHHHHHHHHH
Q 014484 145 STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS---ALEGHFSNDEGTELVRLA 221 (423)
Q Consensus 145 ~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~li 221 (423)
.||+.|||||.+.+..++.++|||||||++|||+||..||........... ....... .........+|+++.+++
T Consensus 174 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~li 252 (299)
T d1ckia_ 174 TGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQK-YERISEKKMSTPIEVLCKGYPSEFATYL 252 (299)
T ss_dssp CCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC--------HHHHHHHHHHSCHHHHTTTSCHHHHHHH
T ss_pred CCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHH-HHHhhcccCCCChhHhccCCCHHHHHHH
Confidence 689999999999999999999999999999999999999875422211111 1011110 111112334678899999
Q ss_pred HHhcccCcCCCCCHHHHHHHHHhhhh
Q 014484 222 SRCLQSEARERPNAKSLVISLMSLQK 247 (423)
Q Consensus 222 ~~cl~~dp~~Rps~~~vl~~l~~~~~ 247 (423)
.+||+.||.+||+++++.+.|+.+..
T Consensus 253 ~~cl~~~p~~RP~~~~i~~~l~~~~~ 278 (299)
T d1ckia_ 253 NFCRSLRFDDKPDYSYLRQLFRNLFH 278 (299)
T ss_dssp HHHHHSCTTCCCCHHHHHHHHHHHHH
T ss_pred HHHccCChhHCcCHHHHHHHHHHHHH
Confidence 99999999999999999888776543
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=3.7e-43 Score=328.68 Aligned_cols=233 Identities=17% Similarity=0.180 Sum_probs=186.0
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHHhcCC-CCCccceEeEEEeC--CceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNLR-SERLANLIGCCYEA--DERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~--~~~~lv~e~~~~~~L~~~i 76 (423)
|+||.||++.+. +..+|+|++.... .+.+.+|+++|+.++ ||||++++++|... ...++|||||.+++|....
T Consensus 46 G~fg~V~~a~~~~~~~~vAiK~i~~~~--~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~ 123 (328)
T d3bqca1 46 GKYSEVFEAINITNNEKVVVKILKPVK--KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY 123 (328)
T ss_dssp CSSEEEEEEEETTTTEEEEEEEECSSC--HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEEECCCSCBGGGTT
T ss_pred CcCeEEEEEEECCCCCEEEEEEECHHH--HHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEEeecCCCcHHHHh
Confidence 899999999985 7889999886543 457889999999995 99999999999854 4589999999999997764
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCC-CeEEccccccccCCCC---CccccCcccCC
Q 014484 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDG-NPRLSSFGLMKNSRDG---KSYSTNLAFTP 152 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~-~~kl~Dfg~~~~~~~~---~~~~~t~~y~a 152 (423)
+.+++..+..++.||+.||.|||++| |+||||||+|||++.++ .++|+|||+++..... ....+|+.|+|
T Consensus 124 -----~~l~e~~i~~i~~qil~aL~~LH~~g-IvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~~~~~~~~t~~y~a 197 (328)
T d3bqca1 124 -----QTLTDYDIRFYMYEILKALDYCHSMG-IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG 197 (328)
T ss_dssp -----TSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTTEEEECCGGGCEECCTTCCCCSCCSCGGGCC
T ss_pred -----cCCCHHHHHHHHHHHHHHHHHHhhcc-cccccccccceEEcCCCCeeeecccccceeccCCCcccccccCccccC
Confidence 35999999999999999999999999 99999999999998765 5899999999866543 44568999999
Q ss_pred ccccccCC-CCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchh------------------------hhhcc-----
Q 014484 153 PEYMRTGR-VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNF------------------------LLLMD----- 202 (423)
Q Consensus 153 PE~~~~~~-~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~------------------------~~~~~----- 202 (423)
||.+.+.. ++.++||||+||++++|++|..||............. .....
T Consensus 198 PE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (328)
T d3bqca1 198 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRK 277 (328)
T ss_dssp HHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGTCCCCCCC
T ss_pred cccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCcccchhccccccc
Confidence 99987654 7999999999999999999998876432110000000 00000
Q ss_pred ---ccccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHH
Q 014484 203 ---SALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISL 242 (423)
Q Consensus 203 ---~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l 242 (423)
..........+++++.+||++||+.||.+|||++|+++|-
T Consensus 278 ~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp 320 (328)
T d3bqca1 278 RWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 320 (328)
T ss_dssp CGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred chhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcCc
Confidence 0011112234578899999999999999999999999874
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.8e-44 Score=333.23 Aligned_cols=237 Identities=18% Similarity=0.225 Sum_probs=193.0
Q ss_pred CCCCccceeeee-----cceeeeeecCCCh-----hhHHHHHHHHHHHhcCCC-CCccceEeEEEeCCceeEEEecCCCC
Q 014484 2 GGRCSKFSICWF-----HCHLKSSVLESSD-----LGETLNLEEAKAVGNLRS-ERLANLIGCCYEADERLLVAEFMPNE 70 (423)
Q Consensus 2 G~~g~v~~~~~~-----~~~~~~~~~~~~~-----~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~lv~e~~~~~ 70 (423)
|+||.||++... +..+|+|++.... ...+.+.+|++++++++| |||+++++++.+....++||||+.||
T Consensus 35 G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~~~~v~e~~~~~ 114 (322)
T d1vzoa_ 35 GAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGG 114 (322)
T ss_dssp TTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEECCCCSC
T ss_pred CCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCceeeeeeccccc
Confidence 999999999762 5678888875432 235678899999999976 89999999999999999999999999
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-----Cccc
Q 014484 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-----KSYS 145 (423)
Q Consensus 71 ~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-----~~~~ 145 (423)
+|.+++.. .+.+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.++|+|||+++..... ....
T Consensus 115 ~L~~~i~~--~~~~~e~~~~~~~~Qi~~al~~lH~~~-ivHrDiKp~Nill~~~~~vkL~DFG~a~~~~~~~~~~~~~~~ 191 (322)
T d1vzoa_ 115 ELFTHLSQ--RERFTEHEVQIYVGEIVLALEHLHKLG-IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFC 191 (322)
T ss_dssp BHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGGGGGCGGG
T ss_pred HHHHHHHh--cccccHHHHHHHHHHHHHHHHHhhcCC-EEeccCCccceeecCCCCEEEeeccchhhhcccccccccccc
Confidence 99999964 456889999999999999999999999 999999999999999999999999999765432 3456
Q ss_pred cCcccCCccccccC--CCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhccccccCCCChhHHHHHHHHHHH
Q 014484 146 TNLAFTPPEYMRTG--RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASR 223 (423)
Q Consensus 146 ~t~~y~aPE~~~~~--~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 223 (423)
|++.|++||.+.+. .++.++|||||||++|+|++|..||................. .....++..+++++.+|+.+
T Consensus 192 g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~--~~~~~~~~~~s~~~~~li~~ 269 (322)
T d1vzoa_ 192 GTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRIL--KSEPPYPQEMSALAKDLIQR 269 (322)
T ss_dssp SCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHH--HCCCCCCTTSCHHHHHHHHH
T ss_pred cccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcc--cCCCCCcccCCHHHHHHHHH
Confidence 89999999998765 478899999999999999999999876432211111111111 12234556788999999999
Q ss_pred hcccCcCCCC-----CHHHHHHHHH
Q 014484 224 CLQSEARERP-----NAKSLVISLM 243 (423)
Q Consensus 224 cl~~dp~~Rp-----s~~~vl~~l~ 243 (423)
||+.||.+|| |++|+++|-.
T Consensus 270 ~l~~dP~~R~s~~~~t~~eil~Hpf 294 (322)
T d1vzoa_ 270 LLMKDPKKRLGCGPRDADEIKEHLF 294 (322)
T ss_dssp HTCSSGGGSTTSSTTTHHHHHTSGG
T ss_pred HcccCHHHcCCCCcccHHHHHcCHh
Confidence 9999999999 4899988743
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.1e-43 Score=320.84 Aligned_cols=238 Identities=16% Similarity=0.143 Sum_probs=191.6
Q ss_pred CCCCccceeeee--cceeeeeecCCCh---hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCceeEEEecCCCCCHHhhh
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i 76 (423)
|+||.||++.+. +..+|+|++.... .....+.+|+.+++.++||||+++++++.+....++||+++.|++|..++
T Consensus 13 G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~~~~~~~l~~~~ 92 (292)
T d1unla_ 13 GTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFD 92 (292)
T ss_dssp CSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSEEHHHHHH
T ss_pred CcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEeeecccccccccc
Confidence 999999999985 6678888874332 34678899999999999999999999999999999999999999998877
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCCC----ccccCcccCC
Q 014484 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK----SYSTNLAFTP 152 (423)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~----~~~~t~~y~a 152 (423)
. ..+.+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||.++...... ...++..|+|
T Consensus 93 ~--~~~~~~~~~~~~~~~q~~~aL~~lH~~~-IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~ 169 (292)
T d1unla_ 93 S--CNGDLDPEIVKSFLFQLLKGLGFCHSRN-VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRP 169 (292)
T ss_dssp H--TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSCCCSCCSCGGGCC
T ss_pred c--cccccchhHHHHHHHHHHHHHHHhhcCC-EeeecccCcccccccCCceeeeecchhhcccCCCccceeeccccchhh
Confidence 5 3567999999999999999999999999 9999999999999999999999999998765432 3456788999
Q ss_pred ccccccCC-CCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhcc------------------------ccccC
Q 014484 153 PEYMRTGR-VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD------------------------SALEG 207 (423)
Q Consensus 153 PE~~~~~~-~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~ 207 (423)
||.+.+.. ++.++||||+||++|||++|..||............+..... .....
T Consensus 170 pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (292)
T d1unla_ 170 PDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLV 249 (292)
T ss_dssp HHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCT
T ss_pred hhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcccccccccccccchhh
Confidence 99887665 689999999999999999999886432111100000100000 00111
Q ss_pred CCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHH
Q 014484 208 HFSNDEGTELVRLASRCLQSEARERPNAKSLVISL 242 (423)
Q Consensus 208 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l 242 (423)
......++++.+|+.+||+.||.+|||++|+++|-
T Consensus 250 ~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~Hp 284 (292)
T d1unla_ 250 NVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHP 284 (292)
T ss_dssp TTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTSG
T ss_pred hccccCCHHHHHHHHHHccCChhHCcCHHHHhcCh
Confidence 12334578899999999999999999999999873
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.2e-43 Score=329.43 Aligned_cols=236 Identities=13% Similarity=0.137 Sum_probs=180.0
Q ss_pred CCCCccceeeee--cceeeeeecCCCh---hhHHHHHHHHHHHhcCCCCCccceEeEEEeC------CceeEEEecCCCC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEA------DERLLVAEFMPNE 70 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~~~~lv~e~~~~~ 70 (423)
|+||.||++.+. +..+|+|++.... .....+.+|+.++++++|||||+++++|... ..+|+|||||.++
T Consensus 28 G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~~~iv~Ey~~~~ 107 (355)
T d2b1pa1 28 GAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN 107 (355)
T ss_dssp C--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEEECCSEE
T ss_pred CcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCceeEEEEeccchH
Confidence 999999999985 7889999886543 3455788999999999999999999999643 5689999999775
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC---CccccC
Q 014484 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTN 147 (423)
Q Consensus 71 ~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~~t 147 (423)
.+ +.+ .+.+++..+..++.||+.||.|||++| |+||||||+|||++.++.++++|||+++..... ....+|
T Consensus 108 l~-~~~----~~~~~~~~i~~~~~qil~gl~~LH~~g-iiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~t 181 (355)
T d2b1pa1 108 LC-QVI----QMELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVT 181 (355)
T ss_dssp HH-HHH----TSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCCCC---------------C
T ss_pred HH-Hhh----hcCCCHHHHHHHHHHHHHHHHHhhhcc-cccccCCccccccccccceeeechhhhhcccccccccccccc
Confidence 44 444 245899999999999999999999999 999999999999999999999999998766543 345689
Q ss_pred cccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchh------------------------------
Q 014484 148 LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNF------------------------------ 197 (423)
Q Consensus 148 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~------------------------------ 197 (423)
+.|+|||++.+..++.++||||+||++++|++|..||.............
T Consensus 182 ~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (355)
T d2b1pa1 182 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAG 261 (355)
T ss_dssp CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCC
T ss_pred ccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHHhhcCccccc
Confidence 99999999999999999999999999999999999886542221111000
Q ss_pred ---hhhccccccCC---CChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHHH
Q 014484 198 ---LLLMDSALEGH---FSNDEGTELVRLASRCLQSEARERPNAKSLVISLM 243 (423)
Q Consensus 198 ---~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l~ 243 (423)
........... .....++++.+||++||++||++|||++|+++|-+
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw 313 (355)
T d2b1pa1 262 LTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 313 (355)
T ss_dssp CCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTT
T ss_pred cccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcc
Confidence 00000000000 11235788999999999999999999999998843
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-42 Score=327.97 Aligned_cols=237 Identities=15% Similarity=0.160 Sum_probs=185.0
Q ss_pred CCCCccceeeee--cceeeeeecCCCh---hhHHHHHHHHHHHhcCCCCCccceEeEEEeC-----CceeEEEecCCCCC
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSD---LGETLNLEEAKAVGNLRSERLANLIGCCYEA-----DERLLVAEFMPNET 71 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~~~lv~e~~~~~~ 71 (423)
|+||.||++.+. +..+|+|++.... ...+.+.+|+++|+.++|||||++++++... ...+++|+|+.||+
T Consensus 29 G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~~~~i~~~~~gg~ 108 (348)
T d2gfsa1 29 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 108 (348)
T ss_dssp GTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCCCCEEEEECCSEE
T ss_pred CCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCceEEEEEeecCCc
Confidence 999999999874 7889999886543 3355788999999999999999999999643 23467778888999
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC-CccccCccc
Q 014484 72 LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG-KSYSTNLAF 150 (423)
Q Consensus 72 L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~~t~~y 150 (423)
|.+++. .+.+++..+..++.||+.||.|||++| |+||||||+|||++.+|.+|++|||++...... ....||+.|
T Consensus 109 L~~~~~---~~~l~e~~~~~i~~qil~aL~~LH~~g-iiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~~~~~~~g~~~y 184 (348)
T d2gfsa1 109 LNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 184 (348)
T ss_dssp HHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCC----CCTGGGSSSCHHHHT
T ss_pred hhhhcc---cccccHHHHHHHHHHHHHHHHHHHhCC-CcccccCCccccccccccccccccchhcccCcccccccccccc
Confidence 999994 457999999999999999999999999 999999999999999999999999998765533 446689999
Q ss_pred CCccccccCC-CCCCcceehhHHHHHHHhhCCCCCCchhhHHhhhchhhhhc----------------------cccccC
Q 014484 151 TPPEYMRTGR-VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLM----------------------DSALEG 207 (423)
Q Consensus 151 ~aPE~~~~~~-~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~ 207 (423)
+|||.+.+.. ++.++|||||||++|+|++|..||.+............... ......
T Consensus 185 ~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (348)
T d2gfsa1 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKM 264 (348)
T ss_dssp SCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSCCCCCC
T ss_pred cCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhhhhhhcccCCCc
Confidence 9999877654 68899999999999999999999875422211111100000 000000
Q ss_pred C---CChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHH
Q 014484 208 H---FSNDEGTELVRLASRCLQSEARERPNAKSLVISL 242 (423)
Q Consensus 208 ~---~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l 242 (423)
. .....++++.+||.+||+.||.+|||++|+++|-
T Consensus 265 ~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp 302 (348)
T d2gfsa1 265 NFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 302 (348)
T ss_dssp CHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred chhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCH
Confidence 0 0123467899999999999999999999999884
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=2e-37 Score=293.72 Aligned_cols=240 Identities=14% Similarity=0.187 Sum_probs=183.4
Q ss_pred CCCCccceeeee--cceeeeeecCCChhhHHHHHHHHHHHhcCC-----------CCCccceEeEEEeCC--ceeEEEec
Q 014484 2 GGRCSKFSICWF--HCHLKSSVLESSDLGETLNLEEAKAVGNLR-----------SERLANLIGCCYEAD--ERLLVAEF 66 (423)
Q Consensus 2 G~~g~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~~~~~~~~~~--~~~lv~e~ 66 (423)
|+||.||++.+. +..+|+|++.......+.+.+|+++++.++ |+||+++++++.... ..+++|++
T Consensus 24 G~fg~Vy~~~~~~~g~~vAvKvi~~~~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~~~~ 103 (362)
T d1q8ya_ 24 GHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVF 103 (362)
T ss_dssp CSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEEEEEEEE
T ss_pred CCCeEEEEEEECCCCCEEEEEEEeccccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeeccccceeeeeee
Confidence 899999999874 788999999887777778889999998885 578999999987543 45566666
Q ss_pred CCCC-CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHc-CCCeeeccCCCCCeeecCCCC------eEEccccccccC
Q 014484 67 MPNE-TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSS-KGRALYHDLNAYRILFDKDGN------PRLSSFGLMKNS 138 (423)
Q Consensus 67 ~~~~-~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~~iiH~dlkp~Nill~~~~~------~kl~Dfg~~~~~ 138 (423)
+.++ +............+++..+..++.||+.||.|||+ .| |+||||||+|||++.++. ++++|||.+...
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~-IvHrDlKp~NIll~~~~~~~~~~~~kl~dfg~s~~~ 182 (362)
T d1q8ya_ 104 EVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG-IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWY 182 (362)
T ss_dssp CCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC-EECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEET
T ss_pred cccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcC-cccccCChhHeeeeccCcccccceeeEeeccccccc
Confidence 5443 33333434456679999999999999999999998 78 999999999999976654 899999998755
Q ss_pred CCC-CccccCcccCCccccccCCCCCCcceehhHHHHHHHhhCCCCCCchhhHHhhh------chh--------------
Q 014484 139 RDG-KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRS------KNF-------------- 197 (423)
Q Consensus 139 ~~~-~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~------~~~-------------- 197 (423)
... ....||+.|+|||.+.+..++.++||||+||++++|++|..||.......... ...
T Consensus 183 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~ 262 (362)
T d1q8ya_ 183 DEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNG 262 (362)
T ss_dssp TBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHC
T ss_pred ccccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHhCCCCHHHhhcc
Confidence 533 45678999999999999999999999999999999999999876431110000 000
Q ss_pred ---hhhcc---------c----------cccCCCChhHHHHHHHHHHHhcccCcCCCCCHHHHHHHH
Q 014484 198 ---LLLMD---------S----------ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISL 242 (423)
Q Consensus 198 ---~~~~~---------~----------~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~vl~~l 242 (423)
..... . ......+...++++.+||.+||+.||.+|||++|+++|-
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~Hp 329 (362)
T d1q8ya_ 263 KYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHP 329 (362)
T ss_dssp TTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCG
T ss_pred cccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 00000 0 011223456788999999999999999999999999874
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.83 E-value=1.4e-21 Score=166.59 Aligned_cols=153 Identities=12% Similarity=0.118 Sum_probs=112.8
Q ss_pred CCCCccceeee-ecceeeeeecCCCh-------------------hhHHHHHHHHHHHhcCCCCCccceEeEEEeCCcee
Q 014484 2 GGRCSKFSICW-FHCHLKSSVLESSD-------------------LGETLNLEEAKAVGNLRSERLANLIGCCYEADERL 61 (423)
Q Consensus 2 G~~g~v~~~~~-~~~~~~~~~~~~~~-------------------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 61 (423)
|+||.||.+.. .+..+++|++.... .......+|...+.++.|.+++..+++. ..+
T Consensus 11 G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~~----~~~ 86 (191)
T d1zara2 11 GKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAWE----GNA 86 (191)
T ss_dssp CSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEEE----TTE
T ss_pred CcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEec----CCE
Confidence 99999999986 47788888753211 1123445789999999999999988663 247
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCeeeccCCCCCeeecCCCCeEEccccccccCCCC
Q 014484 62 LVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG 141 (423)
Q Consensus 62 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 141 (423)
++|||+++..+.+ ++...+..++.|++.+|.+||++| |+||||||+|||+++++ ++|+|||+++.....
T Consensus 87 lvme~~~~~~~~~---------l~~~~~~~i~~ql~~~l~~lH~~g-iiHrDiKP~NILv~~~~-~~liDFG~a~~~~~~ 155 (191)
T d1zara2 87 VLMELIDAKELYR---------VRVENPDEVLDMILEEVAKFYHRG-IVHGDLSQYNVLVSEEG-IWIIDFPQSVEVGEE 155 (191)
T ss_dssp EEEECCCCEEGGG---------CCCSCHHHHHHHHHHHHHHHHHTT-EECSCCSTTSEEEETTE-EEECCCTTCEETTST
T ss_pred EEEEeeccccccc---------hhhHHHHHHHHHHHHHHHHHhhCC-EEEccCChhheeeeCCC-EEEEECCCcccCCCC
Confidence 9999998866543 334456789999999999999999 99999999999999665 899999998776533
Q ss_pred CccccCcccCC------ccccccCCCCCCcceehhHHHH
Q 014484 142 KSYSTNLAFTP------PEYMRTGRVTPESVVYSFGTML 174 (423)
Q Consensus 142 ~~~~~t~~y~a------PE~~~~~~~~~~~Di~slG~~l 174 (423)
... .|.. .+.+ ...|+.++|+||+.--+
T Consensus 156 ~~~----~~l~rd~~~~~~~f-~r~y~~~~d~~s~~~~~ 189 (191)
T d1zara2 156 GWR----EILERDVRNIITYF-SRTYRTEKDINSAIDRI 189 (191)
T ss_dssp THH----HHHHHHHHHHHHHH-HHHHCCCCCHHHHHHHH
T ss_pred CcH----HHHHHHHHHHHHHH-cCCCCCcccHHHHHHHH
Confidence 221 1111 1111 35688999999986443
|
| >d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.83 E-value=2.4e-20 Score=145.46 Aligned_cols=102 Identities=25% Similarity=0.388 Sum_probs=99.2
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHH
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 397 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 397 (423)
+..++.+|+.++..|+|++|+..|+++|+.+|. ++.+|+++|.||.++|++++|+.+++++++++|+++.+|+++|.++
T Consensus 3 ~~~l~~~g~~~~~~g~~~eAi~~~~~al~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 81 (117)
T d1elwa_ 3 VNELKEKGNKALSVGNIDDALQCYSEAIKLDPH-NHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAAL 81 (117)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-chhhhhcccccccccccccccchhhhhHHHhccchhhHHHHHHHHH
Confidence 456889999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHhhcccccc
Q 014484 398 FSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 398 ~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
..+|++++|+..|++|++++|.+
T Consensus 82 ~~~~~~~~A~~~~~~a~~~~p~~ 104 (117)
T d1elwa_ 82 EFLNRFEEAKRTYEEGLKHEANN 104 (117)
T ss_dssp HHTTCHHHHHHHHHHHHTTCTTC
T ss_pred HHccCHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999975
|
| >d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: STIP1 homology and U box-containing protein 1, STUB1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.81 E-value=7.3e-20 Score=156.74 Aligned_cols=103 Identities=21% Similarity=0.408 Sum_probs=99.6
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHH
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 397 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 397 (423)
+..++++|+.+++.|+|++|+..|++||+++|. ++.+|+++|.||.++|+|++|+.+|++|++++|+++.+|+++|.+|
T Consensus 4 a~~l~~~Gn~~~~~g~~~~Ai~~~~kal~~~p~-~~~~~~~lg~~y~~~~~~~~Ai~~~~~al~l~p~~~~a~~~lg~~~ 82 (201)
T d2c2la1 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQ 82 (201)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHhHHHHHhhhhhhhhhhHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 567889999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHhhccccccC
Q 014484 398 FSLGMENDARETLKDGTNLEAKKN 421 (423)
Q Consensus 398 ~~~~~~~~A~~~~~~al~l~~~~~ 421 (423)
..+|+|++|+.+|++|++++|...
T Consensus 83 ~~l~~~~~A~~~~~~al~l~p~~~ 106 (201)
T d2c2la1 83 LEMESYDEAIANLQRAYSLAKEQR 106 (201)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHCCCHHHHHHHHHHHHHhCcccH
Confidence 999999999999999999998643
|
| >d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Protein phosphatase 5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.79 E-value=4.8e-19 Score=146.06 Aligned_cols=105 Identities=26% Similarity=0.374 Sum_probs=101.8
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHH
Q 014484 315 MQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQA 394 (423)
Q Consensus 315 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g 394 (423)
.+.+..++.+|+.+++.|+|++|+..|+++|+++|+ +..+|+++|.|+..+|++++|+.+|++|++++|+++.+|+++|
T Consensus 7 l~~a~~l~~~gn~~~~~~~y~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~kal~~~p~~~~a~~~~g 85 (159)
T d1a17a_ 7 LKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRA 85 (159)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHhhhccccchh-hhhhhhhhHHHHHhccccchHHHHHHHHHHHcccchHHHHHHH
Confidence 467788999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHHHHHHHHHhhcccccc
Q 014484 395 ACLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 395 ~~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
.++..+|++++|+.+|+++++++|.+
T Consensus 86 ~~~~~~g~~~eA~~~~~~a~~~~p~~ 111 (159)
T d1a17a_ 86 ASNMALGKFRAALRDYETVVKVKPHD 111 (159)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHcCCHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999864
|
| >d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Putative 70 kda peptidylprolyl isomerase PFL2275c species: Plasmodium falciparum [TaxId: 5833]
Probab=99.76 E-value=3.1e-18 Score=140.01 Aligned_cols=108 Identities=19% Similarity=0.246 Sum_probs=98.8
Q ss_pred hhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCc---------------HHHHhhHHHHHHhcCChHHHHHHHH
Q 014484 313 SQMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVS---------------PTVYARRCLSYLMNDMPQEALGDAM 377 (423)
Q Consensus 313 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---------------~~~~~~~~~~~~~~~~~~~A~~~~~ 377 (423)
.....+..++..|+.+|+.|+|++|+..|++||+..+... ..+|+|+|.||.++|+|++|+.+|+
T Consensus 12 e~~~~a~~~~~~G~~~f~~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~Nla~~~~~l~~~~~Al~~~~ 91 (153)
T d2fbna1 12 EKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHAS 91 (153)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcchhhhhhHHHHHhhhhHHHHHHhhHHHHHHHhcccchhhhhhh
Confidence 3446677899999999999999999999999998766411 2578999999999999999999999
Q ss_pred HhHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 014484 378 QAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 378 ~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
+|++++|++.++|+++|.++..+|++++|+.+|++|++++|.+
T Consensus 92 ~al~~~p~~~ka~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n 134 (153)
T d2fbna1 92 KVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNN 134 (153)
T ss_dssp HHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTC
T ss_pred ccccccchhhhhhHHhHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999999999999999999975
|
| >d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP52 (FKBP4), C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.74 E-value=6.3e-18 Score=140.74 Aligned_cols=108 Identities=12% Similarity=0.104 Sum_probs=99.4
Q ss_pred hhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCc--------------HHHHhhHHHHHHhcCChHHHHHHHHH
Q 014484 313 SQMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVS--------------PTVYARRCLSYLMNDMPQEALGDAMQ 378 (423)
Q Consensus 313 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~--------------~~~~~~~~~~~~~~~~~~~A~~~~~~ 378 (423)
..++.+..++.+|+.+|+.|+|++|+..|++||+..|... ..+|.|+|.||.++|+|++|+.++++
T Consensus 8 ek~~~a~~l~~~G~~~~~~~~~~~Ai~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~y~k~~~~~~A~~~~~~ 87 (170)
T d1p5qa1 8 EKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNK 87 (170)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhccccchHHHhhhchhHHHHHHHHHHHHHhhhhcccccchhhh
Confidence 3455677899999999999999999999999999887521 36788999999999999999999999
Q ss_pred hHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 014484 379 AQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 379 a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
||+++|+++.+|+++|.+|..+|+|++|+.+|++|++++|.+
T Consensus 88 al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~P~n 129 (170)
T d1p5qa1 88 ALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNN 129 (170)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSC
T ss_pred hhhccccchhhhHHHHHHHHHhhhHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999999999999999999999974
|
| >d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP51, C-terminal domain species: Monkey (Saimiri boliviensis) [TaxId: 27679]
Probab=99.72 E-value=1.7e-17 Score=137.78 Aligned_cols=106 Identities=12% Similarity=0.160 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCC--------------cHHHHhhHHHHHHhcCChHHHHHHHHHhH
Q 014484 315 MQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMV--------------SPTVYARRCLSYLMNDMPQEALGDAMQAQ 380 (423)
Q Consensus 315 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~--------------~~~~~~~~~~~~~~~~~~~~A~~~~~~a~ 380 (423)
...+..++++|+.+|+.|+|++|+..|++||...|.. ...+|.|+|.||.++|+|++|+.++++|+
T Consensus 12 ~~~a~~~~e~G~~~~~~~~~~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~Nla~~~~~l~~~~~Ai~~~~~al 91 (168)
T d1kt1a1 12 LEQAAIVKEKGTVYFKGGKYVQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKAL 91 (168)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhccchhhhhhcchhHHHHHHhHHHHHHHhhhcccchhhhhhhh
Confidence 3567789999999999999999999999999754431 13678899999999999999999999999
Q ss_pred hcCCCchHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 014484 381 VVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 381 ~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
+++|++..+|+++|.+|..+|+|++|+++|++|++++|.+
T Consensus 92 ~l~p~~~~a~~~~~~~~~~l~~~~~A~~~~~~al~l~P~n 131 (168)
T d1kt1a1 92 GLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQN 131 (168)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTC
T ss_pred hcccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999999999999999975
|
| >d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.72 E-value=1.2e-17 Score=132.00 Aligned_cols=103 Identities=17% Similarity=0.162 Sum_probs=95.7
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCch-------H
Q 014484 316 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWP-------T 388 (423)
Q Consensus 316 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~-------~ 388 (423)
+++..+++.|+.++..|+|++|+.+|+++|+++|+ +..++.++|.||.++|+|++|+.+|++|++++|++. .
T Consensus 2 ~~a~~~k~~G~~~~~~~~y~~Ai~~y~~al~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~~~~~~~~~~~a~ 80 (128)
T d1elra_ 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPT-NMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAK 80 (128)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-cHHHHHhHHHHHHHcCchHHHHHHHHHHHHhCcccHHHHHHHHH
Confidence 46788899999999999999999999999999999 999999999999999999999999999999999875 4
Q ss_pred HHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 014484 389 ALYLQAACLFSLGMENDARETLKDGTNLEAK 419 (423)
Q Consensus 389 a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 419 (423)
+|+++|.++..++++++|++.|++++.+++.
T Consensus 81 ~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~ 111 (128)
T d1elra_ 81 AYARIGNSYFKEEKYKDAIHFYNKSLAEHRT 111 (128)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC
Confidence 7778888999999999999999999987654
|
| >d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Cyclophilin 40 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.71 E-value=3e-17 Score=136.54 Aligned_cols=109 Identities=19% Similarity=0.202 Sum_probs=98.9
Q ss_pred hhhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhcC----------------CCCCcHHHHhhHHHHHHhcCChHHHHH
Q 014484 311 WTSQMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDG----------------GTMVSPTVYARRCLSYLMNDMPQEALG 374 (423)
Q Consensus 311 ~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~----------------~p~~~~~~~~~~~~~~~~~~~~~~A~~ 374 (423)
.......+..++..|+.++..|+|++|+..|++||+. +|. ...++.|+|.||.++|+|++|+.
T Consensus 20 ~~~~~~~a~~~~~~~~~~~~~~~y~~Ai~~y~~al~~~~~~~~~~~~~~~~~~~~~-~~~~~~nla~~~~~~~~~~~Ai~ 98 (169)
T d1ihga1 20 VDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPV-ALSCVLNIGACKLKMSDWQGAVD 98 (169)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHH-HHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhhhhhhhhhHHHHHhChh-hHHHHHHHHHHHHhhcccchhhh
Confidence 3344455667788999999999999999999999853 455 67889999999999999999999
Q ss_pred HHHHhHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 014484 375 DAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 375 ~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
+|++||+++|+++.+|+++|.+|..+|+|++|+++|++|++++|.+
T Consensus 99 ~~~~al~~~p~~~~a~~~~g~~~~~l~~~~~A~~~~~~al~l~p~n 144 (169)
T d1ihga1 99 SCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPED 144 (169)
T ss_dssp HHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred hhhhhhhhhhhhhhHHHhHHHHHHHccCHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999999999999999999999975
|
| >d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.67 E-value=1.4e-16 Score=122.63 Aligned_cols=94 Identities=13% Similarity=0.052 Sum_probs=91.1
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHh
Q 014484 320 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFS 399 (423)
Q Consensus 320 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~ 399 (423)
.....|..+++.|++++|+..|+++++.+|+ ++.+|.++|.++.++|++++|+.++++|++++|+++.+|+.+|.+|..
T Consensus 18 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~la~~y~~ 96 (112)
T d1hxia_ 18 NPMEEGLSMLKLANLAEAALAFEAVCQKEPE-REEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTN 96 (112)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHhhhcccccc-cchhhhhhhhhhhhhhhHHHhhcccccccccccccccchHHHHHHHHH
Confidence 4467899999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHhh
Q 014484 400 LGMENDARETLKDGT 414 (423)
Q Consensus 400 ~~~~~~A~~~~~~al 414 (423)
+|++++|++.|++.|
T Consensus 97 ~g~~~~A~~~l~~~l 111 (112)
T d1hxia_ 97 EHNANAALASLRAWL 111 (112)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHh
Confidence 999999999999986
|
| >d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Neutrophil cytosolic factor 2 (NCF-2, p67-phox) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.65 E-value=6.2e-16 Score=131.10 Aligned_cols=99 Identities=14% Similarity=0.084 Sum_probs=92.0
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHH
Q 014484 317 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 396 (423)
Q Consensus 317 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~ 396 (423)
++..+.++|..++..|+|++|++.|+++ .|. ++.+|+|+|.+|..+|++++|+++|++|++++|+++.+|+++|.+
T Consensus 4 ~~~~l~~~g~~~~~~~d~~~Al~~~~~i---~~~-~~~~~~nlG~~~~~~g~~~~A~~~~~kAl~ldp~~~~a~~~~g~~ 79 (192)
T d1hh8a_ 4 EAISLWNEGVLAADKKDWKGALDAFSAV---QDP-HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGML 79 (192)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHTS---SSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHhc---CCC-CHHHHHHHHHHHHHcCCchhHHHHHHHHHHHhhhhhhhHHHHHHH
Confidence 5667889999999999999999999874 555 788999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhccccc
Q 014484 397 LFSLGMENDARETLKDGTNLEAK 419 (423)
Q Consensus 397 ~~~~~~~~~A~~~~~~al~l~~~ 419 (423)
+..+|+|++|+++|++|++..+.
T Consensus 80 ~~~~g~~~~A~~~~~kAl~~~~~ 102 (192)
T d1hh8a_ 80 YYQTEKYDLAIKDLKEALIQLRG 102 (192)
T ss_dssp HHHTTCHHHHHHHHHHHHHTTTT
T ss_pred HHhhccHHHHHHHHHHHHHhCcc
Confidence 99999999999999999987654
|
| >d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Lipoprotein NlpI species: Escherichia coli [TaxId: 562]
Probab=99.64 E-value=7e-16 Score=136.83 Aligned_cols=104 Identities=12% Similarity=-0.011 Sum_probs=99.8
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHH
Q 014484 316 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAA 395 (423)
Q Consensus 316 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~ 395 (423)
..+..+...|..+++.|+|++|+..|++||+++|+ ++.+|+++|.+|..+|++++|+.+|++|++++|+++.+|+++|.
T Consensus 35 ~~a~~~~~~G~~y~~~g~~~~A~~~~~~al~l~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~ 113 (259)
T d1xnfa_ 35 ERAQLLYERGVLYDSLGLRALARNDFSQALAIRPD-MPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGI 113 (259)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHhhccCCC-CHHHHhhhchHHHHHHHHHHhhhhhhHHHHHHhhhhhhHHHHHH
Confidence 35667788999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhcccccc
Q 014484 396 CLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 396 ~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
++..+|++++|++.|+++++++|..
T Consensus 114 ~~~~~g~~~~A~~~~~~al~~~p~~ 138 (259)
T d1xnfa_ 114 ALYYGGRDKLAQDDLLAFYQDDPND 138 (259)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHhhHHHHHHHHHHHHhhcccc
Confidence 9999999999999999999998864
|
| >d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: CT2138-like domain: Hypothetical protein CT2138 species: Chlorobium tepidum [TaxId: 1097]
Probab=99.59 E-value=1e-15 Score=125.18 Aligned_cols=107 Identities=16% Similarity=0.121 Sum_probs=94.3
Q ss_pred hHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCC-----------cHHHHhhHHHHHHhcCChHHHHHHHHHhHhc
Q 014484 314 QMQETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMV-----------SPTVYARRCLSYLMNDMPQEALGDAMQAQVV 382 (423)
Q Consensus 314 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-----------~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l 382 (423)
.+..+..++..|+..+..|+|++|+..|++||+++|+. ...+|.|+|.||.++|+|++|+.++++++++
T Consensus 5 ~~a~a~~~l~~g~~~~~~g~y~~Ai~~y~~Al~i~~~~~~~~~~~~~~~~a~~~~nlg~~~~~lg~~~~A~~~~~~al~~ 84 (156)
T d2hr2a1 5 EVVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHY 84 (156)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhChhhhhhhhcccchhHHHHHHHHHHHHHHcCccchhhHhhhhhhhc
Confidence 34566777888999999999999999999999988762 1368999999999999999999999999987
Q ss_pred CCC-----------chHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 014484 383 SPD-----------WPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 383 ~p~-----------~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
.|+ +..+|+++|.+|..+|++++|+++|++|+++.|+.
T Consensus 85 ~~~~~~~~~~~~~~~~~a~~~~g~~~~~lg~~eeA~~~~~~Al~l~~~~ 133 (156)
T d2hr2a1 85 FNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEER 133 (156)
T ss_dssp HHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHC
T ss_pred ccccccccccccchhHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhHHh
Confidence 543 45589999999999999999999999999998864
|
| >d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.59 E-value=8.1e-16 Score=119.82 Aligned_cols=98 Identities=7% Similarity=-0.026 Sum_probs=89.4
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcC---ChHHHHHHHHHhHhcCCCc--hHHHHHHHHH
Q 014484 322 KKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMND---MPQEALGDAMQAQVVSPDW--PTALYLQAAC 396 (423)
Q Consensus 322 ~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~---~~~~A~~~~~~a~~l~p~~--~~a~~~~g~~ 396 (423)
...++.+...+++++|++.|++++.++|. +..+++|+|.|+.+.+ ++++|+..+++++..+|.+ ..+|+++|.+
T Consensus 3 ~~l~n~~~~~~~l~~Ae~~Y~~aL~~~p~-~~~~~~n~a~~L~~s~~~~d~~~Ai~~l~~~l~~~~~~~~~~~~~~Lg~~ 81 (122)
T d1nzna_ 3 EAVLNELVSVEDLLKFEKKFQSEKAAGSV-SKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVG 81 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhccCCchHHHHHHHHHHH
Confidence 34678888999999999999999999999 9999999999998754 5567999999999998865 5699999999
Q ss_pred HHhCCChHHHHHHHHHhhcccccc
Q 014484 397 LFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 397 ~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
|..+|+|++|+++|+++++++|.+
T Consensus 82 y~~~g~~~~A~~~~~~aL~~~P~~ 105 (122)
T d1nzna_ 82 NYRLKEYEKALKYVRGLLQTEPQN 105 (122)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHhhhHHHHHHHHHHHHhCcCC
Confidence 999999999999999999999975
|
| >d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Neutrophil cytosolic factor 2 (NCF-2, p67-phox) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.56 E-value=1.3e-14 Score=122.78 Aligned_cols=101 Identities=18% Similarity=0.107 Sum_probs=93.9
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCc-------------
Q 014484 320 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW------------- 386 (423)
Q Consensus 320 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~------------- 386 (423)
.+...|..++..|+|++|++.|++||+++|+ ++.+|+++|.||.++|+|++|+.+|++|+...|.+
T Consensus 38 ~~~nlG~~~~~~g~~~~A~~~~~kAl~ldp~-~~~a~~~~g~~~~~~g~~~~A~~~~~kAl~~~~~n~~~~~~~~~~~~~ 116 (192)
T d1hh8a_ 38 ICFNIGCMYTILKNMTEAEKAFTRSINRDKH-LAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFK 116 (192)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCE
T ss_pred HHHHHHHHHHHcCCchhHHHHHHHHHHHhhh-hhhhHHHHHHHHHhhccHHHHHHHHHHHHHhCccCchHHHHHhhhhcc
Confidence 4678999999999999999999999999999 99999999999999999999999999999876543
Q ss_pred ---hHHHHHHHHHHHhCCChHHHHHHHHHhhccccccC
Q 014484 387 ---PTALYLQAACLFSLGMENDARETLKDGTNLEAKKN 421 (423)
Q Consensus 387 ---~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 421 (423)
.++++++|.++..+|++++|++.|++|+++.|+..
T Consensus 117 ~~~~e~~~n~a~~~~~~~~~~~A~~~l~~A~~~~~~~~ 154 (192)
T d1hh8a_ 117 LFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPR 154 (192)
T ss_dssp EEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGG
T ss_pred cchHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcc
Confidence 47899999999999999999999999999988753
|
| >d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondrial import receptor subunit tom20-3 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.51 E-value=4e-15 Score=119.90 Aligned_cols=93 Identities=14% Similarity=0.075 Sum_probs=84.3
Q ss_pred HHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhc----------CChHHHHHHHHHhHhcCCCchHHHHHHHHH
Q 014484 327 TAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMN----------DMPQEALGDAMQAQVVSPDWPTALYLQAAC 396 (423)
Q Consensus 327 ~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~----------~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~ 396 (423)
.+-+.+.|++|+..|++|++++|+ ++.+++++|.++..+ +.+++|+..|++|++++|+++.+|+++|.+
T Consensus 6 ~~~r~~~fe~A~~~~e~al~~~P~-~~~~~~~~g~~l~~~~~~~~~~e~~~~~~~Ai~~~~kAl~l~P~~~~a~~~lG~~ 84 (145)
T d1zu2a1 6 EFDRILLFEQIRQDAENTYKSNPL-DADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNA 84 (145)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHccHHHHHHHHHHHHhhCCc-chHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHhcchhhHHHhhHHHH
Confidence 345567799999999999999999 999999999999865 455889999999999999999999999999
Q ss_pred HHhCCC-----------hHHHHHHHHHhhcccccc
Q 014484 397 LFSLGM-----------ENDARETLKDGTNLEAKK 420 (423)
Q Consensus 397 ~~~~~~-----------~~~A~~~~~~al~l~~~~ 420 (423)
|..+|+ |++|++.|++|++++|.+
T Consensus 85 y~~~g~~~~~~~~~~~~~~~A~~~~~kal~l~P~~ 119 (145)
T d1zu2a1 85 YTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDN 119 (145)
T ss_dssp HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred HHHcccchhhHHHHHHhHHHhhhhhhcccccCCCH
Confidence 998764 799999999999999975
|
| >d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.49 E-value=4.5e-14 Score=129.18 Aligned_cols=101 Identities=16% Similarity=0.211 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHH
Q 014484 319 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLF 398 (423)
Q Consensus 319 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~ 398 (423)
..+...|..+...|++++|+..|+++++.+|+ +..+|.++|.+|..+|++++|+..|+++++++|+++.+|+++|.+|.
T Consensus 173 ~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~ 251 (323)
T d1fcha_ 173 DVQCGLGVLFNLSGEYDKAVDCFTAALSVRPN-DYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISCI 251 (323)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred ccchhhHHHHHHHHHHhhhhcccccccccccc-cccchhhhhhcccccccchhHHHHHHHHHHHhhccHHHHHHHHHHHH
Confidence 34567899999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred hCCChHHHHHHHHHhhcccccc
Q 014484 399 SLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 399 ~~~~~~~A~~~~~~al~l~~~~ 420 (423)
.+|++++|++.|++|++++|..
T Consensus 252 ~~g~~~~A~~~~~~al~l~p~~ 273 (323)
T d1fcha_ 252 NLGAHREAVEHFLEALNMQRKS 273 (323)
T ss_dssp HHTCHHHHHHHHHHHHHHHHTC
T ss_pred HCCCHHHHHHHHHHHHHhCCcC
Confidence 9999999999999999999874
|
| >d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Protein farnesyltransferase alpha-subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.45 E-value=1.2e-13 Score=126.17 Aligned_cols=103 Identities=8% Similarity=-0.034 Sum_probs=93.4
Q ss_pred HHHHHHHHHHHHHhcC-CHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHH
Q 014484 317 ETLNSKKHGDTAFRAK-DFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAA 395 (423)
Q Consensus 317 ~~~~~~~~g~~~~~~~-~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~ 395 (423)
....+..+|..+...| ++++|+..|+++|+.+|+ +..+|+++|.++..+|++++|+.++++|++++|++..+|+++|.
T Consensus 76 ~~~a~~~r~~~l~~l~~~~~eal~~~~~al~~~p~-~~~a~~~~~~~~~~l~~~~eAl~~~~kal~~dp~n~~a~~~~~~ 154 (315)
T d2h6fa1 76 NYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPK-NYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQW 154 (315)
T ss_dssp CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHh-hhhHHHHHhHHHHhhccHHHHHHHHhhhhhhhhcchHHHHHHHH
Confidence 3446778888888765 699999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhcccccc
Q 014484 396 CLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 396 ~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
++..+|++++|+++|++|++++|.+
T Consensus 155 ~~~~~~~~~~Al~~~~~al~~~p~n 179 (315)
T d2h6fa1 155 VIQEFKLWDNELQYVDQLLKEDVRN 179 (315)
T ss_dssp HHHHHTCCTTHHHHHHHHHHHCTTC
T ss_pred HHHHHHhhHHHHHHHHHHHHHCCcc
Confidence 9999999999999999999999875
|
| >d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Protein farnesyltransferase alpha-subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.44 E-value=2e-13 Score=124.72 Aligned_cols=94 Identities=15% Similarity=-0.012 Sum_probs=54.8
Q ss_pred HHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCC-hHHHHHHHHHhHhcCCCchHHHHHHHHHHHhCCCh
Q 014484 325 GDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDM-PQEALGDAMQAQVVSPDWPTALYLQAACLFSLGME 403 (423)
Q Consensus 325 g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~-~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~ 403 (423)
|..+.+++.+++|++.|++||+++|+ +..+|++||.++..+|+ +++|+.+++++++++|++..+|+++|.++..+|++
T Consensus 50 ~~~~~~~e~~~~Al~~~~~ai~lnP~-~~~a~~~r~~~l~~l~~~~~eal~~~~~al~~~p~~~~a~~~~~~~~~~l~~~ 128 (315)
T d2h6fa1 50 RAVLQRDERSERAFKLTRDAIELNAA-NYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDP 128 (315)
T ss_dssp HHHHHHTCCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCC
T ss_pred HHHHHhCCchHHHHHHHHHHHHHCCC-ChHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhhhhHHHHHhHHHHhhccH
Confidence 45555555555565566666555555 55555555555555543 55555555555555555555555555555555555
Q ss_pred HHHHHHHHHhhccccc
Q 014484 404 NDARETLKDGTNLEAK 419 (423)
Q Consensus 404 ~~A~~~~~~al~l~~~ 419 (423)
++|++.|++|++++|.
T Consensus 129 ~eAl~~~~kal~~dp~ 144 (315)
T d2h6fa1 129 SQELEFIADILNQDAK 144 (315)
T ss_dssp TTHHHHHHHHHHHCTT
T ss_pred HHHHHHHhhhhhhhhc
Confidence 5566555555555554
|
| >d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.44 E-value=3.6e-13 Score=123.02 Aligned_cols=99 Identities=15% Similarity=0.127 Sum_probs=95.7
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHhC
Q 014484 321 SKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSL 400 (423)
Q Consensus 321 ~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~ 400 (423)
.+++|..+++.|+|++|+..|+++|+.+|+ +..+|.++|.++..+|++++|+..+++|++++|+++.+|+++|.+|..+
T Consensus 22 ~~~~g~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~ 100 (323)
T d1fcha_ 22 PFEEGLRRLQEGDLPNAVLLFEAAVQQDPK-HMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSFTNE 100 (323)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHSCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCChHHHHHHHHhhhcccccccccccccccccccc
Confidence 457899999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHhhcccccc
Q 014484 401 GMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 401 ~~~~~A~~~~~~al~l~~~~ 420 (423)
|++++|++.|+++++++|..
T Consensus 101 ~~~~~A~~~~~~~~~~~~~~ 120 (323)
T d1fcha_ 101 SLQRQACEILRDWLRYTPAY 120 (323)
T ss_dssp TCHHHHHHHHHHHHHTSTTT
T ss_pred ccccccccchhhHHHhccch
Confidence 99999999999999988864
|
| >d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.40 E-value=4.1e-13 Score=99.45 Aligned_cols=83 Identities=12% Similarity=-0.012 Sum_probs=74.3
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCC------cHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHH
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMV------SPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALY 391 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~------~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~ 391 (423)
+...+..|..+++.|+|++|+..|++|+++.|.. ...++.++|.|+.++|++++|+..+++|++++|+++.+++
T Consensus 5 addc~~lG~~~~~~g~y~~A~~~~~~Al~~~~~~~~~~~~~~~~l~~Lg~~~~~~g~~~~A~~~y~~aL~l~P~~~~a~~ 84 (95)
T d1tjca_ 5 AEDSFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANG 84 (95)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhhhhccCccHHHHHHHHhhHHHhcCChHHHHHHHHHHHHhCcCCHHHHH
Confidence 4567889999999999999999999999876541 3678999999999999999999999999999999999999
Q ss_pred HHHHHHHhC
Q 014484 392 LQAACLFSL 400 (423)
Q Consensus 392 ~~g~~~~~~ 400 (423)
+++.+...+
T Consensus 85 Nl~~~~~~l 93 (95)
T d1tjca_ 85 NLKYFEYIM 93 (95)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 998876554
|
| >d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: O-GlcNAc transferase p110 subunit, OGT species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.39 E-value=4.3e-13 Score=124.49 Aligned_cols=98 Identities=13% Similarity=0.008 Sum_probs=94.0
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHhCC
Q 014484 322 KKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLG 401 (423)
Q Consensus 322 ~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~ 401 (423)
++.|+.+++.|+|++|++.|+++++.+|+ +..++.++|.+|..+|++++|+..++++++++|+++.+|+.+|.+|..+|
T Consensus 3 l~la~~~~~~G~~~~A~~~~~~~l~~~p~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~l~~~~~~~g 81 (388)
T d1w3ba_ 3 MELAHREYQAGDFEAAERHCMQLWRQEPD-NTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERG 81 (388)
T ss_dssp CTHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHhhhhc
Confidence 46799999999999999999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHhhcccccc
Q 014484 402 MENDARETLKDGTNLEAKK 420 (423)
Q Consensus 402 ~~~~A~~~~~~al~l~~~~ 420 (423)
++++|++.+.++++.++..
T Consensus 82 ~~~~A~~~~~~~~~~~~~~ 100 (388)
T d1w3ba_ 82 QLQEAIEHYRHALRLKPDF 100 (388)
T ss_dssp CHHHHHHHHHHHHHHCTTC
T ss_pred ccccccccccccccccccc
Confidence 9999999999999887753
|
| >d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: O-GlcNAc transferase p110 subunit, OGT species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.34 E-value=2.7e-12 Score=118.92 Aligned_cols=101 Identities=15% Similarity=0.045 Sum_probs=95.8
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHH
Q 014484 319 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLF 398 (423)
Q Consensus 319 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~ 398 (423)
..+...|..+...|++++|++.|++++...|. +...+..++.++...|++++|+..++++++++|+++.+|+++|.+|.
T Consensus 272 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~ 350 (388)
T d1w3ba_ 272 DAYCNLANALKEKGSVAEAEDCYNTALRLCPT-HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQ 350 (388)
T ss_dssp HHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHhhhccCCc-cchhhhHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 35667899999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred hCCChHHHHHHHHHhhcccccc
Q 014484 399 SLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 399 ~~~~~~~A~~~~~~al~l~~~~ 420 (423)
.+|++++|++.|++|++++|..
T Consensus 351 ~~g~~~~A~~~~~~al~l~P~~ 372 (388)
T d1w3ba_ 351 QQGKLQEALMHYKEAIRISPTF 372 (388)
T ss_dssp TTTCCHHHHHHHHHHHTTCTTC
T ss_pred HcCCHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999974
|
| >d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: BTAD-like domain: Probable regulatory protein EmbR, middle domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.26 E-value=4.3e-11 Score=99.23 Aligned_cols=97 Identities=9% Similarity=-0.001 Sum_probs=89.7
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCc----------------------HHHHhhHHHHHHhcCChHHHH
Q 014484 316 QETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVS----------------------PTVYARRCLSYLMNDMPQEAL 373 (423)
Q Consensus 316 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~----------------------~~~~~~~~~~~~~~~~~~~A~ 373 (423)
.....+...|..+...|++++|+..|.+|+++.+. . ..++.+++.++..+|++++|+
T Consensus 9 ~~f~~~~~~g~~~~~~g~~e~A~~~~~~AL~l~rG-~~l~~~~~~~w~~~~r~~l~~~~~~a~~~la~~~~~~g~~~~Al 87 (179)
T d2ff4a2 9 GRFVAEKTAGVHAAAAGRFEQASRHLSAALREWRG-PVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVI 87 (179)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCS-STTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcc-cccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHH
Confidence 34457788999999999999999999999999775 2 167899999999999999999
Q ss_pred HHHHHhHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHh
Q 014484 374 GDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDG 413 (423)
Q Consensus 374 ~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a 413 (423)
.+++++++++|.+..+|..++.+|..+|++.+|++.|+++
T Consensus 88 ~~~~~al~~~P~~e~~~~~l~~al~~~Gr~~eAl~~y~~~ 127 (179)
T d2ff4a2 88 AELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRV 127 (179)
T ss_dssp HHHHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998
|
| >d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Cyclophilin 40 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.25 E-value=1.7e-11 Score=100.93 Aligned_cols=89 Identities=15% Similarity=0.124 Sum_probs=82.6
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHH
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 397 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 397 (423)
+..+...|..+++.|+|++|+..|++||+++|. ++.+|+++|.+|..+|++++|+.+|++|++++|++..++..++.+.
T Consensus 77 ~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~-~~~a~~~~g~~~~~l~~~~~A~~~~~~al~l~p~n~~~~~~l~~~~ 155 (169)
T d1ihga1 77 LSCVLNIGACKLKMSDWQGAVDSCLEALEIDPS-NTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVK 155 (169)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcccchhhhhhhhhhhhhhh-hhhHHHhHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 445667899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHH
Q 014484 398 FSLGMENDAR 407 (423)
Q Consensus 398 ~~~~~~~~A~ 407 (423)
..++.+.++.
T Consensus 156 ~~l~~~~~~~ 165 (169)
T d1ihga1 156 QKIKAQKDKE 165 (169)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8877776654
|
| >d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Lipoprotein NlpI species: Escherichia coli [TaxId: 562]
Probab=99.22 E-value=6.2e-12 Score=110.73 Aligned_cols=90 Identities=17% Similarity=0.157 Sum_probs=80.8
Q ss_pred cCCHHHHHHHHHHHhcCCCC---CcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHhCCChHHHH
Q 014484 331 AKDFSTAIDCYTQFIDGGTM---VSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDAR 407 (423)
Q Consensus 331 ~~~~~~A~~~~~~ai~~~p~---~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~ 407 (423)
..+++.|+..+++++...+. ..+.+|+++|.+|..+|++++|+..|++|++++|+++.+|+++|.++..+|++++|+
T Consensus 12 ~~~~e~al~~~~e~l~~~~~~~~~~a~~~~~~G~~y~~~g~~~~A~~~~~~al~l~p~~~~a~~~lg~~~~~~g~~~~A~ 91 (259)
T d1xnfa_ 12 TLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAY 91 (259)
T ss_dssp CHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHH
T ss_pred cHHHHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHhhccCCCCHHHHhhhchHHHHHHHHHHhh
Confidence 34567888888999875332 156899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccccc
Q 014484 408 ETLKDGTNLEAKK 420 (423)
Q Consensus 408 ~~~~~al~l~~~~ 420 (423)
+.|++|++++|..
T Consensus 92 ~~~~~al~~~p~~ 104 (259)
T d1xnfa_ 92 EAFDSVLELDPTY 104 (259)
T ss_dssp HHHHHHHHHCTTC
T ss_pred hhhhHHHHHHhhh
Confidence 9999999999864
|
| >d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.22 E-value=2.5e-11 Score=93.30 Aligned_cols=81 Identities=10% Similarity=-0.045 Sum_probs=76.1
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHH
Q 014484 317 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 396 (423)
Q Consensus 317 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~ 396 (423)
....+...|..++..|+|++|+..|.++++++|+ +..+|+++|.++..+|++++|+.++++|++++|+++.++..++.+
T Consensus 36 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~l 114 (117)
T d1elwa_ 36 NHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPD-WGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNM 114 (117)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHH
T ss_pred chhhhhcccccccccccccccchhhhhHHHhccc-hhhHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 3456778999999999999999999999999999 999999999999999999999999999999999999999999887
Q ss_pred HH
Q 014484 397 LF 398 (423)
Q Consensus 397 ~~ 398 (423)
..
T Consensus 115 ~~ 116 (117)
T d1elwa_ 115 EA 116 (117)
T ss_dssp HH
T ss_pred hC
Confidence 53
|
| >d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP51, C-terminal domain species: Monkey (Saimiri boliviensis) [TaxId: 27679]
Probab=99.21 E-value=3.5e-11 Score=98.93 Aligned_cols=92 Identities=16% Similarity=0.185 Sum_probs=83.1
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHh
Q 014484 320 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFS 399 (423)
Q Consensus 320 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~ 399 (423)
.+.+.|..+++.|+|.+|+..++++|+++|. +..+|+++|.||..+|+|++|+.+|++|++++|+++.++..++.+...
T Consensus 66 ~~~Nla~~~~~l~~~~~Ai~~~~~al~l~p~-~~~a~~~~~~~~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~ 144 (168)
T d1kt1a1 66 AFLNLAMCYLKLREYTKAVECCDKALGLDSA-NEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQIFMCQKK 144 (168)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHhhhcccchhhhhhhhhcccc-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 4567899999999999999999999999999 999999999999999999999999999999999999999999999988
Q ss_pred CCChHH-HHHHHHH
Q 014484 400 LGMEND-ARETLKD 412 (423)
Q Consensus 400 ~~~~~~-A~~~~~~ 412 (423)
++++.+ ..+.|.+
T Consensus 145 ~~~~~e~~kk~~~~ 158 (168)
T d1kt1a1 145 AKEHNERDRRTYAN 158 (168)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHH
Confidence 887764 3344333
|
| >d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP52 (FKBP4), C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.20 E-value=2.7e-11 Score=99.82 Aligned_cols=88 Identities=15% Similarity=0.098 Sum_probs=81.7
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHh
Q 014484 320 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFS 399 (423)
Q Consensus 320 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~ 399 (423)
.+...|..+++.|+|++|+..++++|+++|+ +..+|+++|.||..+|+|++|+.+|++|++++|+++.+...++.++..
T Consensus 64 ~~~nla~~y~k~~~~~~A~~~~~~al~~~p~-~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~ 142 (170)
T d1p5qa1 64 SHLNLAMCHLKLQAFSAAIESCNKALELDSN-NEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQR 142 (170)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhcccccchhhhhhhcccc-chhhhHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 3456899999999999999999999999999 999999999999999999999999999999999999999999999988
Q ss_pred CCChHHHHH
Q 014484 400 LGMENDARE 408 (423)
Q Consensus 400 ~~~~~~A~~ 408 (423)
++++.+..+
T Consensus 143 ~~~~~~~e~ 151 (170)
T d1p5qa1 143 IRRQLAREK 151 (170)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 887776543
|
| >d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Putative 70 kda peptidylprolyl isomerase PFL2275c species: Plasmodium falciparum [TaxId: 5833]
Probab=99.15 E-value=3.5e-11 Score=97.23 Aligned_cols=82 Identities=13% Similarity=0.111 Sum_probs=76.7
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHh
Q 014484 320 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFS 399 (423)
Q Consensus 320 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~ 399 (423)
.+.+.|..+++.|+|++|+..|++||+++|. +..+|+++|.+|..+|++++|+.+|++|++++|++..+...++.+..+
T Consensus 69 ~~~Nla~~~~~l~~~~~Al~~~~~al~~~p~-~~ka~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~k 147 (153)
T d2fbna1 69 CNLNLATCYNKNKDYPKAIDHASKVLKIDKN-NVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNK 147 (153)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHhcccchhhhhhhccccccch-hhhhhHHhHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 4557899999999999999999999999999 999999999999999999999999999999999999999999988776
Q ss_pred CCC
Q 014484 400 LGM 402 (423)
Q Consensus 400 ~~~ 402 (423)
+++
T Consensus 148 l~~ 150 (153)
T d2fbna1 148 LKE 150 (153)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
|
| >d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Protein phosphatase 5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.14 E-value=1.1e-10 Score=94.80 Aligned_cols=95 Identities=17% Similarity=0.050 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHH
Q 014484 317 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAAC 396 (423)
Q Consensus 317 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~ 396 (423)
....+...|..++..|++++|+..|+++|+++|+ +..+|.++|.++..+|++++|+.+++++++++|+++.++..++.+
T Consensus 43 ~~~~~~~lg~~~~~~~~~~~A~~~~~kal~~~p~-~~~a~~~~g~~~~~~g~~~eA~~~~~~a~~~~p~~~~~~~~l~~~ 121 (159)
T d1a17a_ 43 NAIYYGNRSLAYLRTECYGYALGDATRAIELDKK-YIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQEC 121 (159)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred hhhhhhhhHHHHHhccccchHHHHHHHHHHHccc-chHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 4457788999999999999999999999999999 999999999999999999999999999999999999999888877
Q ss_pred H--HhCCChHHHHHHHHH
Q 014484 397 L--FSLGMENDARETLKD 412 (423)
Q Consensus 397 ~--~~~~~~~~A~~~~~~ 412 (423)
. ...+.+++|+.....
T Consensus 122 ~~~~~~~~~~~a~~~~~~ 139 (159)
T d1a17a_ 122 NKIVKQKAFERAIAGDEH 139 (159)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcHH
Confidence 5 444557777765433
|
| >d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.08 E-value=1.1e-10 Score=91.27 Aligned_cols=69 Identities=19% Similarity=0.073 Sum_probs=65.4
Q ss_pred HHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHhhccccccC
Q 014484 353 PTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKKN 421 (423)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 421 (423)
+..+.++|.+++..|+|++|+.+|++||+++|+++.+++++|.+|..+|+|++|+++|++|++++|...
T Consensus 4 a~~~k~~G~~~~~~~~y~~Ai~~y~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~~~~~ 72 (128)
T d1elra_ 4 ALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENR 72 (128)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHhHHHHHHHcCchHHHHHHHHHHHHhCcccH
Confidence 456778999999999999999999999999999999999999999999999999999999999998753
|
| >d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: STIP1 homology and U box-containing protein 1, STUB1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.05 E-value=2.4e-10 Score=96.25 Aligned_cols=69 Identities=13% Similarity=0.079 Sum_probs=66.0
Q ss_pred cHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 014484 352 SPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
++..+.+.|..+++.|+|++|+..|++||+++|+++.+|+++|.+|..+|+|++|+.+|++|++++|..
T Consensus 3 ~a~~l~~~Gn~~~~~g~~~~Ai~~~~kal~~~p~~~~~~~~lg~~y~~~~~~~~Ai~~~~~al~l~p~~ 71 (201)
T d2c2la1 3 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQS 71 (201)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTC
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHhhhhhhhhhhHHHHHHHHhCCCc
Confidence 467788999999999999999999999999999999999999999999999999999999999999974
|
| >d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.04 E-value=2.4e-10 Score=86.94 Aligned_cols=67 Identities=16% Similarity=-0.053 Sum_probs=64.1
Q ss_pred HHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 014484 354 TVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
..++++|.++.+.|++++|+..++++++++|+++.+|+.+|.++..+|++++|+.+|++|++++|..
T Consensus 17 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~ 83 (112)
T d1hxia_ 17 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKD 83 (112)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHhhhcccccccchhhhhhhhhhhhhhhHHHhhccccccccccccc
Confidence 4567899999999999999999999999999999999999999999999999999999999999974
|
| >d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.03 E-value=2.3e-10 Score=84.15 Aligned_cols=68 Identities=10% Similarity=-0.150 Sum_probs=62.2
Q ss_pred HHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCC-------chHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 014484 353 PTVYARRCLSYLMNDMPQEALGDAMQAQVVSPD-------WPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~-------~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
+.-.+++|.++.+.|+|++|+..+++|+++.|. .+.+++++|.++..+|++++|++.|++||+++|.+
T Consensus 5 addc~~lG~~~~~~g~y~~A~~~~~~Al~~~~~~~~~~~~~~~~l~~Lg~~~~~~g~~~~A~~~y~~aL~l~P~~ 79 (95)
T d1tjca_ 5 AEDSFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEH 79 (95)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhhhhccCccHHHHHHHHhhHHHhcCChHHHHHHHHHHHHhCcCC
Confidence 455789999999999999999999999988654 37899999999999999999999999999999985
|
| >d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondrial import receptor subunit tom20-3 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=98.93 E-value=5.6e-10 Score=89.03 Aligned_cols=86 Identities=14% Similarity=-0.034 Sum_probs=72.4
Q ss_pred HHHHHHHHHH----------hcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCC-----------hHHHHHHHHH
Q 014484 320 NSKKHGDTAF----------RAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDM-----------PQEALGDAMQ 378 (423)
Q Consensus 320 ~~~~~g~~~~----------~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~-----------~~~A~~~~~~ 378 (423)
.+...|..++ ..+.+++|+..|++||+++|+ +..+|+++|.+|..+|+ |++|++.|++
T Consensus 33 ~~~~~g~~l~~~~~~~~~~e~~~~~~~Ai~~~~kAl~l~P~-~~~a~~~lG~~y~~~g~~~~~~~~~~~~~~~A~~~~~k 111 (145)
T d1zu2a1 33 NLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPK-KDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQ 111 (145)
T ss_dssp HHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHhcch-hhHHHhhHHHHHHHcccchhhHHHHHHhHHHhhhhhhc
Confidence 4455666655 345678999999999999999 99999999999988754 7999999999
Q ss_pred hHhcCCCchHHHHHHHHHHHhCCChHHH
Q 014484 379 AQVVSPDWPTALYLQAACLFSLGMENDA 406 (423)
Q Consensus 379 a~~l~p~~~~a~~~~g~~~~~~~~~~~A 406 (423)
|++++|++..++..++.+....+.+.++
T Consensus 112 al~l~P~~~~~~~~L~~~~ka~~~~~e~ 139 (145)
T d1zu2a1 112 AVDEQPDNTHYLKSLEMTAKAPQLHAEA 139 (145)
T ss_dssp HHHHCTTCHHHHHHHHHHHTHHHHHHHH
T ss_pred ccccCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999997666555554
|
| >d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio parahaemolyticus [TaxId: 670]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: ImpE-like superfamily: ImpE-like family: ImpE-like domain: Hypothetical protein VPA1032 species: Vibrio parahaemolyticus [TaxId: 670]
Probab=98.91 E-value=2.3e-09 Score=94.22 Aligned_cols=95 Identities=9% Similarity=0.029 Sum_probs=81.4
Q ss_pred HHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHH------
Q 014484 324 HGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL------ 397 (423)
Q Consensus 324 ~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~------ 397 (423)
++..+++.|++++|+..|+++|+.+|. +..++.+++.+|...|++++|+..++++++++|++..++..++.++
T Consensus 2 q~~~aL~~G~l~eAl~~l~~al~~~P~-d~~ar~~La~lL~~~G~~e~A~~~l~~a~~l~P~~~~~~~~l~~ll~a~~~~ 80 (264)
T d1zbpa1 2 QWKNALSEGQLQQALELLIEAIKASPK-DASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRHLVKAAQAR 80 (264)
T ss_dssp CHHHHTTTTCHHHHHHHHHHHHHTCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHCCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhcccc
Confidence 467889999999999999999999999 9999999999999999999999999999999988776666554444
Q ss_pred -----------------------------HhCCChHHHHHHHHHhhccccc
Q 014484 398 -----------------------------FSLGMENDARETLKDGTNLEAK 419 (423)
Q Consensus 398 -----------------------------~~~~~~~~A~~~~~~al~l~~~ 419 (423)
...|++++|++.++++.++.|.
T Consensus 81 ~~a~~~~~~~~~~~~p~~~~~~l~~a~~~~~~gd~~~A~~~~~~a~e~~p~ 131 (264)
T d1zbpa1 81 KDFAQGAATAKVLGENEELTKSLVSFNLSMVSQDYEQVSELALQIEELRQE 131 (264)
T ss_dssp HHHTTSCCCEECCCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHhhhhhcccCchHHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC
Confidence 4456777777777777777665
|
| >d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.91 E-value=9.1e-10 Score=84.81 Aligned_cols=81 Identities=11% Similarity=-0.025 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHhc---CCHHHHHHHHHHHhcCCCCCc--HHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHH
Q 014484 319 LNSKKHGDTAFRA---KDFSTAIDCYTQFIDGGTMVS--PTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQ 393 (423)
Q Consensus 319 ~~~~~~g~~~~~~---~~~~~A~~~~~~ai~~~p~~~--~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~ 393 (423)
..++..|..+++. +++++|+..|+++++.+|. + ..+++++|.+|.++|+|++|+.+++++++++|++..|...+
T Consensus 34 ~~~~n~a~~L~~s~~~~d~~~Ai~~l~~~l~~~~~-~~~~~~~~~Lg~~y~~~g~~~~A~~~~~~aL~~~P~~~~A~~l~ 112 (122)
T d1nzna_ 34 STQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSK-EEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELE 112 (122)
T ss_dssp HHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCH-HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHhcchHHHHHHHHHHHHHHhccCC-chHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCcCCHHHHHHH
Confidence 3556778888764 4667899999999999986 4 45899999999999999999999999999999999999999
Q ss_pred HHHHHhC
Q 014484 394 AACLFSL 400 (423)
Q Consensus 394 g~~~~~~ 400 (423)
+.+..++
T Consensus 113 ~~I~~~~ 119 (122)
T d1nzna_ 113 RLIDKAM 119 (122)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8877654
|
| >d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: SMG-7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.85 E-value=8.3e-10 Score=106.79 Aligned_cols=99 Identities=9% Similarity=-0.117 Sum_probs=64.5
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHH
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL 397 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 397 (423)
...+...|..+.+.|++++|+..|.+++..+|. .++.++|.++...|+|++|+..|++|++++|+++.+|+++|.++
T Consensus 120 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~---~~~~~LG~l~~~~~~~~~A~~~y~~A~~l~P~~~~~~~~Lg~~~ 196 (497)
T d1ya0a1 120 RVKSSQLGIISNKQTHTSAIVKPQSSSCSYICQ---HCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILA 196 (497)
T ss_dssp -----------------------CCHHHHHHHH---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHH
T ss_pred HHHHHHhHHHHHhCCCHHHHHHHHHHHhCCCHH---HHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCchHHHHHHHHHH
Confidence 345566788888888888888888888877654 57778888888888888888888888888888888888888888
Q ss_pred HhCCChHHHHHHHHHhhccccc
Q 014484 398 FSLGMENDARETLKDGTNLEAK 419 (423)
Q Consensus 398 ~~~~~~~~A~~~~~~al~l~~~ 419 (423)
...|++.+|+..|.+|+.++|.
T Consensus 197 ~~~~~~~~A~~~y~ral~~~~~ 218 (497)
T d1ya0a1 197 SSKGDHLTTIFYYCRSIAVKFP 218 (497)
T ss_dssp HHTTCHHHHHHHHHHHHSSSBC
T ss_pred HHcCCHHHHHHHHHHHHhCCCC
Confidence 8888888888888888887764
|
| >d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Vesicular transport protein sec17 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.84 E-value=2.4e-09 Score=95.87 Aligned_cols=103 Identities=11% Similarity=-0.023 Sum_probs=88.5
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCC-----CCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCc------
Q 014484 318 TLNSKKHGDTAFRAKDFSTAIDCYTQFIDGG-----TMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDW------ 386 (423)
Q Consensus 318 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~-----p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~------ 386 (423)
+..+.+.|+.+...|+|++|++.|.+|+++. +.....+|.++|.||.++|++++|++.+++++++.++.
T Consensus 37 a~~y~~aa~~y~~~~~~~~A~~~y~kA~~~~~~~~~~~~~a~~~~~~g~~y~~~~~~~~A~~~~~~a~~~~~~~~~~~~~ 116 (290)
T d1qqea_ 37 ADLCVQAATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRG 116 (290)
T ss_dssp HHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhCCcHHHHHHHHHhhHHhhhcccchhH
Confidence 4467788899999999999999999999863 22145789999999999999999999999999987665
Q ss_pred hHHHHHHHHHHHh-CCChHHHHHHHHHhhcccccc
Q 014484 387 PTALYLQAACLFS-LGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 387 ~~a~~~~g~~~~~-~~~~~~A~~~~~~al~l~~~~ 420 (423)
..++.++|.++.. +|++++|++.|++|+++.+..
T Consensus 117 ~~~~~~l~~~~~~~~~~~~~A~~~~~~A~~l~~~~ 151 (290)
T d1qqea_ 117 ANFKFELGEILENDLHDYAKAIDCYELAGEWYAQD 151 (290)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHhc
Confidence 6789999998865 699999999999999886653
|
| >d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase alpha-subunit, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Rab geranylgeranyltransferase alpha-subunit, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.77 E-value=1.2e-08 Score=93.03 Aligned_cols=85 Identities=12% Similarity=0.085 Sum_probs=51.2
Q ss_pred CHHHHHHHHHHHhcCCCCCcHHHH-hhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHhCCChHHHHHHHH
Q 014484 333 DFSTAIDCYTQFIDGGTMVSPTVY-ARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLK 411 (423)
Q Consensus 333 ~~~~A~~~~~~ai~~~p~~~~~~~-~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~ 411 (423)
++++|+..++++++++|. +..++ ..+|.++...+++++|+..++++++++|++..+|+++|.++..+|++++|+..++
T Consensus 124 ~~~~a~~~~~~al~~~~~-~~~~~~~~~~~~~~~~~~~~~Al~~~~~~i~~~p~~~~a~~~l~~~~~~~~~~~~A~~~~~ 202 (334)
T d1dcea1 124 NWARELELCARFLEADER-NFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGR 202 (334)
T ss_dssp CHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHHHHHHHHHHHSCCCCSSSCCS
T ss_pred cHHHHHHHHHHHHhhCch-hhhhhhhHHHHHHHhccccHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 456666666666666665 44443 4455566666666666666666666666666666666666666666666666665
Q ss_pred Hhhcccc
Q 014484 412 DGTNLEA 418 (423)
Q Consensus 412 ~al~l~~ 418 (423)
+++++.|
T Consensus 203 ~~~~~~~ 209 (334)
T d1dcea1 203 LPENVLL 209 (334)
T ss_dssp SCHHHHH
T ss_pred HhHHhHH
Confidence 5555544
|
| >d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase alpha-subunit, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Rab geranylgeranyltransferase alpha-subunit, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.72 E-value=3.8e-08 Score=89.52 Aligned_cols=86 Identities=6% Similarity=-0.092 Sum_probs=74.8
Q ss_pred HHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCC--hHHHHHHHHHhHhcCCCchHHH-HHHHHHHHhCCChHHHHHHH
Q 014484 334 FSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDM--PQEALGDAMQAQVVSPDWPTAL-YLQAACLFSLGMENDARETL 410 (423)
Q Consensus 334 ~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~--~~~A~~~~~~a~~l~p~~~~a~-~~~g~~~~~~~~~~~A~~~~ 410 (423)
+++|+.+|+++++.+|+ +..+|+++|.++..+++ +++|+..++++++++|.+..++ +..|.++...+++++|+..+
T Consensus 89 ~~~al~~~~~~l~~~pk-~~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~Al~~~ 167 (334)
T d1dcea1 89 VKAELGFLESCLRVNPK-SYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFT 167 (334)
T ss_dssp HHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCC-cHHHHHHhhHHHHHhccccHHHHHHHHHHHHhhCchhhhhhhhHHHHHHHhccccHHHHHHH
Confidence 78899999999999998 89999999988887765 7899999999999999888886 46788888899999999999
Q ss_pred HHhhcccccc
Q 014484 411 KDGTNLEAKK 420 (423)
Q Consensus 411 ~~al~l~~~~ 420 (423)
+++++++|.+
T Consensus 168 ~~~i~~~p~~ 177 (334)
T d1dcea1 168 DSLITRNFSN 177 (334)
T ss_dssp HTTTTTTCCC
T ss_pred HHHHHcCCCC
Confidence 9999998864
|
| >d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Vesicular transport protein sec17 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.70 E-value=1.9e-08 Score=89.84 Aligned_cols=104 Identities=9% Similarity=-0.199 Sum_probs=88.4
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCC-----cHHHHhhHHHHHHh-cCChHHHHHHHHHhHhcCCC-----
Q 014484 317 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMV-----SPTVYARRCLSYLM-NDMPQEALGDAMQAQVVSPD----- 385 (423)
Q Consensus 317 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-----~~~~~~~~~~~~~~-~~~~~~A~~~~~~a~~l~p~----- 385 (423)
.+..+...|..+.+.|++++|++.|++++++.+.. ...++.++|.+|.. .|++++|+..+++|+++.+.
T Consensus 76 ~a~~~~~~g~~y~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~A~~l~~~~~~~~ 155 (290)
T d1qqea_ 76 AGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVA 155 (290)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHhCCcHHHHHHHHHhhHHhhhcccchhHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHhcCchh
Confidence 34577888999999999999999999999876541 25788899988865 69999999999999987432
Q ss_pred -chHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 014484 386 -WPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 386 -~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
...++.++|.++..+|+|++|+..|+++++..+..
T Consensus 156 ~~~~~~~~la~~~~~~g~y~~A~~~~~~~~~~~~~~ 191 (290)
T d1qqea_ 156 LSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGN 191 (290)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSC
T ss_pred hhhhHHHHHHHHHHHcChHHHHHHHHHHHHHhCccc
Confidence 35679999999999999999999999999887654
|
| >d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Transcription factor MalT domain III domain: Transcription factor MalT domain III species: Escherichia coli [TaxId: 562]
Probab=98.68 E-value=4.7e-08 Score=88.41 Aligned_cols=103 Identities=13% Similarity=-0.037 Sum_probs=88.9
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCc----HHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCC------c
Q 014484 317 ETLNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVS----PTVYARRCLSYLMNDMPQEALGDAMQAQVVSPD------W 386 (423)
Q Consensus 317 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~----~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~------~ 386 (423)
.+....-+|..++..|++++|+..|+++++..|..+ ..++.++|.+|..+|++++|+..+++++++.+. .
T Consensus 11 ~ae~~~lrA~~~~~~g~~~~A~~~~~~aL~~~~~~~~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~ 90 (366)
T d1hz4a_ 11 HAEFNALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYA 90 (366)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred hHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcCCCcHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhcchHHH
Confidence 344445579999999999999999999999999832 358899999999999999999999999987543 3
Q ss_pred hHHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 014484 387 PTALYLQAACLFSLGMENDARETLKDGTNLEAK 419 (423)
Q Consensus 387 ~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 419 (423)
..+++.+|.++...|++..|+..+.+++++.+.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~~~ 123 (366)
T d1hz4a_ 91 LWSLIQQSEILFAQGFLQTAWETQEKAFQLINE 123 (366)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHh
Confidence 567899999999999999999999999977654
|
| >d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: SMG-7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.52 E-value=1.4e-07 Score=90.72 Aligned_cols=82 Identities=13% Similarity=-0.055 Sum_probs=77.4
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHH
Q 014484 319 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLF 398 (423)
Q Consensus 319 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~ 398 (423)
..+...|..+...|+|++|+..|.+|++++|+ +..+|+++|.++...|++.+|+.+|.+|+.++|.++.|+.+++.++.
T Consensus 153 ~~~~~LG~l~~~~~~~~~A~~~y~~A~~l~P~-~~~~~~~Lg~~~~~~~~~~~A~~~y~ral~~~~~~~~a~~nL~~~~~ 231 (497)
T d1ya0a1 153 HCLVHLGDIARYRNQTSQAESYYRHAAQLVPS-NGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALS 231 (497)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-BSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHHCCC-chHHHHHHHHHHHHcCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Confidence 35667899999999999999999999999999 99999999999999999999999999999999999999999999887
Q ss_pred hCC
Q 014484 399 SLG 401 (423)
Q Consensus 399 ~~~ 401 (423)
...
T Consensus 232 ~~~ 234 (497)
T d1ya0a1 232 KAL 234 (497)
T ss_dssp HHT
T ss_pred Hhh
Confidence 654
|
| >d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Transcription factor MalT domain III domain: Transcription factor MalT domain III species: Escherichia coli [TaxId: 562]
Probab=98.46 E-value=2.3e-07 Score=83.71 Aligned_cols=100 Identities=13% Similarity=0.010 Sum_probs=87.9
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCC---cHHHHhhHHHHHHhcCChHHHHHHHHHhH------hcCCCchHHH
Q 014484 320 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMV---SPTVYARRCLSYLMNDMPQEALGDAMQAQ------VVSPDWPTAL 390 (423)
Q Consensus 320 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~---~~~~~~~~~~~~~~~~~~~~A~~~~~~a~------~l~p~~~~a~ 390 (423)
.+...|..+...|++++|...+.++++..|.. ....+.++|.++..+|++++|+..+++++ ...|+.+.++
T Consensus 215 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 294 (366)
T d1hz4a_ 215 ANKVRVIYWQMTGDKAAAANWLRHTAKPEFANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSLRLMSDLNRNL 294 (366)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHSCCCCCTTCGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhcccChHHHHHH
Confidence 45567888899999999999999999988762 24567889999999999999999999998 4467788999
Q ss_pred HHHHHHHHhCCChHHHHHHHHHhhccccc
Q 014484 391 YLQAACLFSLGMENDARETLKDGTNLEAK 419 (423)
Q Consensus 391 ~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 419 (423)
+.+|.+|..+|++++|++.|++|+++.+.
T Consensus 295 ~~la~~~~~~g~~~~A~~~l~~Al~l~~~ 323 (366)
T d1hz4a_ 295 LLLNQLYWQAGRKSDAQRVLLDALKLANR 323 (366)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHhhh
Confidence 99999999999999999999999988654
|
| >d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: CT2138-like domain: Hypothetical protein CT2138 species: Chlorobium tepidum [TaxId: 1097]
Probab=98.41 E-value=1.9e-07 Score=74.85 Aligned_cols=67 Identities=15% Similarity=0.035 Sum_probs=58.6
Q ss_pred HHHHhhH--HHHHHhcCChHHHHHHHHHhHhcCCCc------------hHHHHHHHHHHHhCCChHHHHHHHHHhhcccc
Q 014484 353 PTVYARR--CLSYLMNDMPQEALGDAMQAQVVSPDW------------PTALYLQAACLFSLGMENDARETLKDGTNLEA 418 (423)
Q Consensus 353 ~~~~~~~--~~~~~~~~~~~~A~~~~~~a~~l~p~~------------~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 418 (423)
..+|.++ |..++..|+|++|+..|++|+++.|+. +.+|.++|.+|..+|+|++|++++++++++.+
T Consensus 7 a~a~~~l~~g~~~~~~g~y~~Ai~~y~~Al~i~~~~~~~~~~~~~~~~a~~~~nlg~~~~~lg~~~~A~~~~~~al~~~~ 86 (156)
T d2hr2a1 7 VGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFN 86 (156)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhChhhhhhhhcccchhHHHHHHHHHHHHHHcCccchhhHhhhhhhhccc
Confidence 3455555 778889999999999999999998875 46899999999999999999999999998876
Q ss_pred c
Q 014484 419 K 419 (423)
Q Consensus 419 ~ 419 (423)
.
T Consensus 87 ~ 87 (156)
T d2hr2a1 87 R 87 (156)
T ss_dssp H
T ss_pred c
Confidence 5
|
| >d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.35 E-value=1e-06 Score=66.18 Aligned_cols=67 Identities=9% Similarity=-0.020 Sum_probs=31.8
Q ss_pred HHHHhhHHHHHHhcC---ChHHHHHHHHHhHhcCCCch-HHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 014484 353 PTVYARRCLSYLMND---MPQEALGDAMQAQVVSPDWP-TALYLQAACLFSLGMENDARETLKDGTNLEAK 419 (423)
Q Consensus 353 ~~~~~~~~~~~~~~~---~~~~A~~~~~~a~~l~p~~~-~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 419 (423)
....++.|.|+.+.. +.++|+..++++++.+|.+. +++|++|.+|+++|+|++|++.++++|+++|.
T Consensus 35 ~qt~F~YAw~Lv~S~~~~d~~~gI~lLe~~~~~~p~~~rd~lY~Lav~yyklgdy~~A~~~~~~~L~ieP~ 105 (124)
T d2pqrb1 35 IQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERN 105 (124)
T ss_dssp HHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT
T ss_pred cchHHHHHHHHHcCCcHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHccCCC
Confidence 344444444444332 22345555555555444332 45555555555555555555555555555544
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=98.33 E-value=6e-07 Score=78.38 Aligned_cols=124 Identities=9% Similarity=-0.061 Sum_probs=83.1
Q ss_pred CccceeeeecceeeeeecCCChh-hHHHHHHHHHHHhcCC-CCCccceEeEEEeCCceeEEEecCCCCCHHhhhccCCCC
Q 014484 5 CSKFSICWFHCHLKSSVLESSDL-GETLNLEEAKAVGNLR-SERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQ 82 (423)
Q Consensus 5 g~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~ 82 (423)
..||+....+..+.+|+...... ....+.+|...+..+. +--+++++.++..++..++||++++|.++.+.....
T Consensus 28 ~~v~rv~~~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~l~G~~~~~~~~~~--- 104 (263)
T d1j7la_ 28 AKVYKLVGENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEYEDE--- 104 (263)
T ss_dssp SEEEEEECSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHHHTTTC---
T ss_pred CcEEEEEeCCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEeccccccccccccc---
Confidence 45777665566666666544332 2445778999888774 334788899999888899999999998886654210
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHc---------------------------------------------------------
Q 014484 83 PMKWAMRLRVALYLAQALEYCSS--------------------------------------------------------- 105 (423)
Q Consensus 83 ~~~~~~~~~i~~qi~~~l~~lH~--------------------------------------------------------- 105 (423)
.. ...++.++...+..||+
T Consensus 105 -~~---~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 180 (263)
T d1j7la_ 105 -QS---PEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPE 180 (263)
T ss_dssp -SC---HHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGGSTTCSCSSHHHHHHHHHHSCCC
T ss_pred -cc---HHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhhcccccccchHHHHHHHHHHhcCCc
Confidence 11 12233334444444442
Q ss_pred --CCCeeeccCCCCCeeecCCCCeEEccccccc
Q 014484 106 --KGRALYHDLNAYRILFDKDGNPRLSSFGLMK 136 (423)
Q Consensus 106 --~~~iiH~dlkp~Nill~~~~~~kl~Dfg~~~ 136 (423)
.. ++|+|+.|.||++++++...|+||+.+.
T Consensus 181 ~~~~-l~HgD~~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T d1j7la_ 181 EELV-FSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp CCEE-EECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred CCcE-EEEeeccCcceeecCCceEEEeechhcc
Confidence 12 6899999999999977666799998653
|
| >d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.21 E-value=1.1e-06 Score=65.87 Aligned_cols=77 Identities=5% Similarity=-0.189 Sum_probs=63.4
Q ss_pred HHHHHHHHhc---CCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHH
Q 014484 322 KKHGDTAFRA---KDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLF 398 (423)
Q Consensus 322 ~~~g~~~~~~---~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~ 398 (423)
++-|-.+.+. .+.++||..++++++.+|.....+++++|.+|.++|+|++|.++++++++++|+|..|...+-.+-.
T Consensus 39 F~YAw~Lv~S~~~~d~~~gI~lLe~~~~~~p~~~rd~lY~Lav~yyklgdy~~A~~~~~~~L~ieP~n~qA~~L~~~Ie~ 118 (124)
T d2pqrb1 39 FNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSMVED 118 (124)
T ss_dssp HHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCcHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHccCCCcHHHHHHHHHHHH
Confidence 3345455433 4568999999999999997235899999999999999999999999999999999998877665543
|
| >d2onda1 a.118.8.7 (A:242-549) Cleavage stimulation factor 77 kDa subunit CSTF3 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: HAT/Suf repeat domain: Cleavage stimulation factor 77 kDa subunit CSTF3 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.20 E-value=4.4e-06 Score=74.56 Aligned_cols=98 Identities=13% Similarity=0.014 Sum_probs=86.0
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHH-hcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHh
Q 014484 321 SKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYL-MNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFS 399 (423)
Q Consensus 321 ~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~ 399 (423)
+...++...+.|++++|.+.|.++++..|. +...|...+.... ..|+.+.|...+++++...|+++..|...+..+..
T Consensus 137 w~~~~~~~~~~~~~~~ar~i~~~al~~~~~-~~~~~~~~a~~e~~~~~~~~~a~~i~e~~l~~~p~~~~~w~~y~~~~~~ 215 (308)
T d2onda1 137 YIQYMKFARRAEGIKSGRMIFKKAREDART-RHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSH 215 (308)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHTSTTC-CTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence 455667777889999999999999999999 8888888887644 46889999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHhhccccc
Q 014484 400 LGMENDARETLKDGTNLEAK 419 (423)
Q Consensus 400 ~~~~~~A~~~~~~al~l~~~ 419 (423)
.|+++.|...|++|++..|.
T Consensus 216 ~g~~~~aR~~fe~ai~~~~~ 235 (308)
T d2onda1 216 LNEDNNTRVLFERVLTSGSL 235 (308)
T ss_dssp TCCHHHHHHHHHHHHHSSSS
T ss_pred cCChHHHHHHHHHHHHhCCC
Confidence 99999999999999986653
|
| >d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio parahaemolyticus [TaxId: 670]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: ImpE-like superfamily: ImpE-like family: ImpE-like domain: Hypothetical protein VPA1032 species: Vibrio parahaemolyticus [TaxId: 670]
Probab=98.08 E-value=2.3e-06 Score=74.55 Aligned_cols=60 Identities=22% Similarity=0.038 Sum_probs=56.4
Q ss_pred HHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 014484 361 LSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFSLGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 361 ~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 420 (423)
.-.++.|++++|+..++++++.+|+++.++..+|.+|...|++++|++.|+++++++|..
T Consensus 4 ~~aL~~G~l~eAl~~l~~al~~~P~d~~ar~~La~lL~~~G~~e~A~~~l~~a~~l~P~~ 63 (264)
T d1zbpa1 4 KNALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEY 63 (264)
T ss_dssp HHHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGG
T ss_pred HHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCc
Confidence 345678999999999999999999999999999999999999999999999999999974
|
| >d2onda1 a.118.8.7 (A:242-549) Cleavage stimulation factor 77 kDa subunit CSTF3 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: HAT/Suf repeat domain: Cleavage stimulation factor 77 kDa subunit CSTF3 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.00 E-value=2e-05 Score=70.15 Aligned_cols=100 Identities=8% Similarity=-0.084 Sum_probs=88.0
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHH-Hh
Q 014484 321 SKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACL-FS 399 (423)
Q Consensus 321 ~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~-~~ 399 (423)
+...+......|++++|...|+++++..|.+...+|...+......|++++|.+.+++|++..|.....|...|... ..
T Consensus 102 ~~~ya~~~~~~~~~~~a~~i~~~~l~~~~~~~~~~w~~~~~~~~~~~~~~~ar~i~~~al~~~~~~~~~~~~~a~~e~~~ 181 (308)
T d2onda1 102 YFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYC 181 (308)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcccHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHh
Confidence 44557777889999999999999999999834567899999999999999999999999999999999999999865 45
Q ss_pred CCChHHHHHHHHHhhcccccc
Q 014484 400 LGMENDARETLKDGTNLEAKK 420 (423)
Q Consensus 400 ~~~~~~A~~~~~~al~l~~~~ 420 (423)
.|+.+.|...|+++++..|..
T Consensus 182 ~~~~~~a~~i~e~~l~~~p~~ 202 (308)
T d2onda1 182 SKDKSVAFKIFELGLKKYGDI 202 (308)
T ss_dssp SCCHHHHHHHHHHHHHHHTTC
T ss_pred ccCHHHHHHHHHHHHHhhhhh
Confidence 689999999999999987753
|
| >d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein C (HcpC) species: Helicobacter pylori [TaxId: 210]
Probab=97.94 E-value=4.8e-05 Score=65.76 Aligned_cols=95 Identities=15% Similarity=0.119 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHh----cCChHHHHHHHHHhHhcCCCchHHHHHHH
Q 014484 319 LNSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLM----NDMPQEALGDAMQAQVVSPDWPTALYLQA 394 (423)
Q Consensus 319 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~a~~l~p~~~~a~~~~g 394 (423)
..+...|..++.+|||++|++.|++|.+. . +..+++++|.+|.. ..++..|...++++.... ++.+.+.+|
T Consensus 3 ~~~~~lG~~~~~~~d~~~A~~~~~kAa~~--g-~~~A~~~Lg~~y~~G~~~~~d~~~a~~~~~~a~~~~--~~~a~~~l~ 77 (265)
T d1ouva_ 3 KELVGLGAKSYKEKDFTQAKKYFEKACDL--K-ENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN--YSNGCHLLG 77 (265)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHC--C-CHHHHHHHHHHHHcCCCcchhHHHHHHhhccccccc--ccchhhccc
Confidence 45678899999999999999999999875 4 78899999999998 679999999999988764 788999999
Q ss_pred HHHHh----CCChHHHHHHHHHhhcccc
Q 014484 395 ACLFS----LGMENDARETLKDGTNLEA 418 (423)
Q Consensus 395 ~~~~~----~~~~~~A~~~~~~al~l~~ 418 (423)
..+.. ..+++.|+..|+++.+.++
T Consensus 78 ~~~~~~~~~~~~~~~a~~~~~~a~~~g~ 105 (265)
T d1ouva_ 78 NLYYSGQGVSQNTNKALQYYSKACDLKY 105 (265)
T ss_dssp HHHHHTSSSCCCHHHHHHHHHHHHHTTC
T ss_pred cccccccccchhhHHHHHHHhhhhhhhh
Confidence 98875 5688999999999987654
|
| >d1klxa_ a.118.18.1 (A:) Cysteine rich protein B (HcpB) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein B (HcpB) species: Helicobacter pylori [TaxId: 210]
Probab=97.91 E-value=5.1e-05 Score=58.32 Aligned_cols=85 Identities=9% Similarity=-0.056 Sum_probs=73.7
Q ss_pred hcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHh----cCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHh----CC
Q 014484 330 RAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLM----NDMPQEALGDAMQAQVVSPDWPTALYLQAACLFS----LG 401 (423)
Q Consensus 330 ~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~----~~ 401 (423)
...++++|+..|+++.+. . ++.+.+++|..|.. ..++++|+..+++|.+. .++.+.+++|.+|.. ..
T Consensus 35 ~~~~~~~a~~~~~~aa~~--g-~~~a~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa~~--g~~~a~~~Lg~~y~~G~gv~~ 109 (133)
T d1klxa_ 35 SQINKQKLFQYLSKACEL--N-SGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYAGKGVVK 109 (133)
T ss_dssp TTSCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCC
T ss_pred cccCHHHHHHHHhhhhcc--c-chhhhhhHHHhhhhccccchhhHHHHHHHhhhhcc--CcchHHHHHHHHHHcCCccCC
Confidence 346899999999999876 4 78899999999986 56799999999999886 578999999999987 57
Q ss_pred ChHHHHHHHHHhhccccc
Q 014484 402 MENDARETLKDGTNLEAK 419 (423)
Q Consensus 402 ~~~~A~~~~~~al~l~~~ 419 (423)
++++|+++|++|.++...
T Consensus 110 d~~~A~~~~~~Aa~~G~~ 127 (133)
T d1klxa_ 110 NEKQAVKTFEKACRLGSE 127 (133)
T ss_dssp CHHHHHHHHHHHHHTTCH
T ss_pred CHHHHHHHHHHHHHCCCH
Confidence 999999999999887543
|
| >d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: BTAD-like domain: Probable regulatory protein EmbR, middle domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.87 E-value=3.4e-05 Score=62.69 Aligned_cols=66 Identities=12% Similarity=0.162 Sum_probs=60.6
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHh-------HhcCCCc
Q 014484 320 NSKKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQA-------QVVSPDW 386 (423)
Q Consensus 320 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a-------~~l~p~~ 386 (423)
.+...|..+...|+|++|+..++++++++|. +..+|.+++.+|..+|++.+|++.|+++ +-++|..
T Consensus 69 a~~~la~~~~~~g~~~~Al~~~~~al~~~P~-~e~~~~~l~~al~~~Gr~~eAl~~y~~~~~~L~~eLG~~P~~ 141 (179)
T d2ff4a2 69 AHTAKAEAEIACGRASAVIAELEALTFEHPY-REPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPGP 141 (179)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCCCH
T ss_pred HHHHHHHHHHHCCCchHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCcCH
Confidence 4567899999999999999999999999999 9999999999999999999999999998 4567764
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=97.61 E-value=4.7e-05 Score=65.52 Aligned_cols=67 Identities=18% Similarity=0.081 Sum_probs=45.1
Q ss_pred Cccceeeee-cceeeeeecCCChhhHHHHHHHHHHHhcCCC--CCccceEeEEEeCCceeEEEecCCCCCHH
Q 014484 5 CSKFSICWF-HCHLKSSVLESSDLGETLNLEEAKAVGNLRS--ERLANLIGCCYEADERLLVAEFMPNETLA 73 (423)
Q Consensus 5 g~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 73 (423)
+.||+.... +..+.+|...... ...+..|+..++.+.. -.+++++.++.+++..++||++++|.++.
T Consensus 25 ~~v~r~~~~~~~~~vlK~~~~~~--~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~~ 94 (255)
T d1nd4a_ 25 AAVFRLSAQGRPVLFVKTDLSGA--LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL 94 (255)
T ss_dssp CEEEEEECTTSCCEEEEEECSCT--TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT
T ss_pred CeEEEEEeCCCCEEEEEeCCccC--HhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeeccccc
Confidence 345666553 3345555543332 3356788888887733 33788888888888899999999987653
|
| >d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein C (HcpC) species: Helicobacter pylori [TaxId: 210]
Probab=97.58 E-value=0.00024 Score=61.12 Aligned_cols=94 Identities=21% Similarity=0.158 Sum_probs=78.2
Q ss_pred HHHHHHHHHh----cCCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHh----cCChHHHHHHHHHhHhcCCCchHHHHH
Q 014484 321 SKKHGDTAFR----AKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLM----NDMPQEALGDAMQAQVVSPDWPTALYL 392 (423)
Q Consensus 321 ~~~~g~~~~~----~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~a~~l~p~~~~a~~~ 392 (423)
....|..+.. ..+...+...++.+.+ +. +..+.+++|.+|.. ..++++|+..|++|.+. +++.++++
T Consensus 145 ~~~L~~~~~~~~~~~~~~~~~~~~~~~a~~--~g-~~~A~~~lg~~y~~g~~~~~d~~~A~~~~~~aa~~--g~~~a~~~ 219 (265)
T d1ouva_ 145 CTILGSLYDAGRGTPKDLKKALASYDKACD--LK-DSPGCFNAGNMYHHGEGATKNFKEALARYSKACEL--ENGGGCFN 219 (265)
T ss_dssp HHHHHHHHHHTSSSCCCHHHHHHHHHHHHH--TT-CHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHT--TCHHHHHH
T ss_pred hhhhhhhhccCCCcccccccchhhhhcccc--cc-ccccccchhhhcccCcccccchhhhhhhHhhhhcc--cCHHHHHH
Confidence 3445555554 5678889999999875 45 78999999999987 67899999999999988 57899999
Q ss_pred HHHHHHh----CCChHHHHHHHHHhhccccc
Q 014484 393 QAACLFS----LGMENDARETLKDGTNLEAK 419 (423)
Q Consensus 393 ~g~~~~~----~~~~~~A~~~~~~al~l~~~ 419 (423)
+|.+|.. .+++++|+++|++|.++..+
T Consensus 220 LG~~y~~G~g~~~n~~~A~~~~~kAa~~g~~ 250 (265)
T d1ouva_ 220 LGAMQYNGEGVTRNEKQAIENFKKGCKLGAK 250 (265)
T ss_dssp HHHHHHTTSSSSCCSTTHHHHHHHHHHHTCH
T ss_pred HHHHHHcCCCCccCHHHHHHHHHHHHHCcCH
Confidence 9999986 55899999999999887654
|
| >d1klxa_ a.118.18.1 (A:) Cysteine rich protein B (HcpB) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein B (HcpB) species: Helicobacter pylori [TaxId: 210]
Probab=97.43 E-value=0.00016 Score=55.38 Aligned_cols=80 Identities=11% Similarity=-0.048 Sum_probs=65.7
Q ss_pred CCHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhcCCCchHHHHHHHHHHHh----CCChHHHH
Q 014484 332 KDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPDWPTALYLQAACLFS----LGMENDAR 407 (423)
Q Consensus 332 ~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~----~~~~~~A~ 407 (423)
+|+++|++.|.+|.+.. +..+.++++. ....++++|+..++++.+. +++.+.+.+|..|.. ..++++|+
T Consensus 7 kd~~~A~~~~~kaa~~g---~~~a~~~l~~--~~~~~~~~a~~~~~~aa~~--g~~~a~~~Lg~~y~~g~~~~~d~~~A~ 79 (133)
T d1klxa_ 7 KDLKKAIQYYVKACELN---EMFGCLSLVS--NSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKAA 79 (133)
T ss_dssp HHHHHHHHHHHHHHHTT---CTTHHHHHHT--CTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHH
T ss_pred cCHHHHHHHHHHHHHCC---Chhhhhhhcc--ccccCHHHHHHHHhhhhcc--cchhhhhhHHHhhhhccccchhhHHHH
Confidence 58899999999999875 3445555543 4567899999999999876 689999999999986 56899999
Q ss_pred HHHHHhhcccc
Q 014484 408 ETLKDGTNLEA 418 (423)
Q Consensus 408 ~~~~~al~l~~ 418 (423)
+.|++|.+...
T Consensus 80 ~~~~~aa~~g~ 90 (133)
T d1klxa_ 80 QYYSKACGLND 90 (133)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHhhhhccCc
Confidence 99999987653
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=96.40 E-value=0.0035 Score=57.15 Aligned_cols=27 Identities=11% Similarity=0.076 Sum_probs=23.5
Q ss_pred eeeccCCCCCeeecCCCCeEEccccccc
Q 014484 109 ALYHDLNAYRILFDKDGNPRLSSFGLMK 136 (423)
Q Consensus 109 iiH~dlkp~Nill~~~~~~kl~Dfg~~~ 136 (423)
++|||+.|.|||+++++ ++|+||..+.
T Consensus 225 LiHGDl~~gNIlv~~~~-~~vID~E~a~ 251 (392)
T d2pula1 225 LIHGDLHTGSIFASEHE-TKVIDPEFAF 251 (392)
T ss_dssp EECSCCCGGGEEECSSC-EEECCCTTCE
T ss_pred eeccCCcCCceeEcCCc-eEEechhhcc
Confidence 89999999999998764 8999998653
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=94.81 E-value=0.069 Score=46.76 Aligned_cols=65 Identities=9% Similarity=-0.049 Sum_probs=39.6
Q ss_pred cceeee-ecceeeeeecCCChhhHHHHHHHHHHHhcCCCCCc--c---ce--EeEEEeCCceeEEEecCCCCC
Q 014484 7 KFSICW-FHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERL--A---NL--IGCCYEADERLLVAEFMPNET 71 (423)
Q Consensus 7 v~~~~~-~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni--v---~~--~~~~~~~~~~~lv~e~~~~~~ 71 (423)
||.... .+..+.+|+..........+..|...+..|....| + .. -..+..++..+.+++++.|..
T Consensus 38 vy~v~~~dg~~~VlK~~rp~~~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G~~ 110 (325)
T d1zyla1 38 VYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQ 110 (325)
T ss_dssp EEEECCTTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCEE
T ss_pred eEEEEcCCCCEEEEEEeCCCCCCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCCcC
Confidence 555543 35667777766555556778889998888742221 1 11 122344556789999998743
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=94.27 E-value=0.021 Score=51.78 Aligned_cols=39 Identities=18% Similarity=0.171 Sum_probs=28.0
Q ss_pred HHHHHHHHHHhcCC-CCCccceEeEEEeCCceeEEEecCCCCCH
Q 014484 30 TLNLEEAKAVGNLR-SERLANLIGCCYEADERLLVAEFMPNETL 72 (423)
Q Consensus 30 ~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~~~L 72 (423)
-...+|..+++.+. +.-.+++++++.+ ++||||++|.+|
T Consensus 89 idr~~E~~i~~~ls~~gl~Pkll~~~~~----g~I~efi~g~~l 128 (395)
T d1nw1a_ 89 SHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEEYIPSRPL 128 (395)
T ss_dssp HHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEECCCCEEEC
T ss_pred hHHHHHHHHHHHHHhCCCCCeEEEEcCC----ceEEEEeccccC
Confidence 34568999999884 4335678887753 689999988554
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=92.48 E-value=0.015 Score=50.87 Aligned_cols=28 Identities=25% Similarity=0.284 Sum_probs=25.3
Q ss_pred CCeeeccCCCCCeeecCCCCeEEcccccc
Q 014484 107 GRALYHDLNAYRILFDKDGNPRLSSFGLM 135 (423)
Q Consensus 107 ~~iiH~dlkp~Nill~~~~~~kl~Dfg~~ 135 (423)
| +||+|+.+.||+++.+...-|+||+.+
T Consensus 184 g-iIHgDl~~dNvl~~~~~v~gvIDF~~~ 211 (316)
T d2ppqa1 184 G-VIHADLFQDNVFFLGDELSGLIDFYFA 211 (316)
T ss_dssp E-EECSCCCGGGEEEETTEEEEECCCTTC
T ss_pred c-cccCCcchhhhhcccccceeEeccccc
Confidence 5 999999999999998877789999965
|
| >d1wfda_ a.7.14.1 (A:) Hypothetical protein 1500032H18Rik {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Spectrin repeat-like superfamily: MIT domain family: MIT domain domain: Hypothetical protein 1500032H18Rik species: Mouse (Mus musculus) [TaxId: 10090]
Probab=89.75 E-value=0.17 Score=34.95 Aligned_cols=34 Identities=21% Similarity=0.272 Sum_probs=29.4
Q ss_pred hhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhc
Q 014484 313 SQMQETLNSKKHGDTAFRAKDFSTAIDCYTQFID 346 (423)
Q Consensus 313 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~ 346 (423)
..+..+..+..+|..+-..|+|++|+.+|.+||+
T Consensus 10 ~~~~~A~~l~~~Av~~D~~g~y~eA~~~Y~~aie 43 (93)
T d1wfda_ 10 SDSTAAVAVLKRAVELDAESRYQQALVCYQEGID 43 (93)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4456788889999999999999999999999975
|
| >d1wr0a1 a.7.14.1 (A:5-81) Vacuolar sorting protein 4b (VPS4B, SKD1 protein) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Spectrin repeat-like superfamily: MIT domain family: MIT domain domain: Vacuolar sorting protein 4b (VPS4B, SKD1 protein) species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.42 E-value=0.14 Score=34.04 Aligned_cols=35 Identities=11% Similarity=0.340 Sum_probs=29.6
Q ss_pred hhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhc
Q 014484 312 TSQMQETLNSKKHGDTAFRAKDFSTAIDCYTQFID 346 (423)
Q Consensus 312 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~ 346 (423)
.+.++.+..+..+|..+=..|+|++|+.+|.+|++
T Consensus 5 ~~~l~~A~~l~~~Av~~D~~~~y~~A~~~Y~~a~~ 39 (77)
T d1wr0a1 5 SPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQ 39 (77)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTCCSSHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 45567788888999999999999999999988875
|
| >d1wfda_ a.7.14.1 (A:) Hypothetical protein 1500032H18Rik {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Spectrin repeat-like superfamily: MIT domain family: MIT domain domain: Hypothetical protein 1500032H18Rik species: Mouse (Mus musculus) [TaxId: 10090]
Probab=83.32 E-value=0.27 Score=33.92 Aligned_cols=34 Identities=15% Similarity=0.046 Sum_probs=23.2
Q ss_pred CHHHHHHHHHHHhcCCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHhHhc
Q 014484 333 DFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVV 382 (423)
Q Consensus 333 ~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l 382 (423)
+...|+.+.++|++.|.. |+|++|+..|.+|+++
T Consensus 11 ~~~~A~~l~~~Av~~D~~----------------g~y~eA~~~Y~~aie~ 44 (93)
T d1wfda_ 11 DSTAAVAVLKRAVELDAE----------------SRYQQALVCYQEGIDM 44 (93)
T ss_dssp HHHHHHHHHHHHHHHHHT----------------TCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHc----------------CCHHHHHHHHHHHHHH
Confidence 455677777777766655 7777777777777643
|
| >d2crba1 a.7.16.1 (A:8-90) Nuclear receptor binding factor 2, NRBF2, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Spectrin repeat-like superfamily: MIT domain-like family: MIT domain domain: Nuclear receptor binding factor 2, NRBF2, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=81.92 E-value=0.87 Score=29.84 Aligned_cols=25 Identities=20% Similarity=0.158 Sum_probs=13.7
Q ss_pred HHHHHHHHHhCCChHHHHHHHHHhh
Q 014484 390 LYLQAACLFSLGMENDARETLKDGT 414 (423)
Q Consensus 390 ~~~~g~~~~~~~~~~~A~~~~~~al 414 (423)
+-++|..+...|+|++||++.++|.
T Consensus 11 ~~RrAer~l~~~rydeAIech~kA~ 35 (83)
T d2crba1 11 QSRRADRLLAAGKYEEAISCHRKAT 35 (83)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 4455555555555555555555544
|