Citrus Sinensis ID: 014515
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 423 | 2.2.26 [Sep-21-2011] | |||||||
| Q8S528 | 534 | Aldehyde dehydrogenase fa | yes | no | 1.0 | 0.792 | 0.820 | 0.0 | |
| Q9SU63 | 538 | Aldehyde dehydrogenase fa | no | no | 1.0 | 0.786 | 0.777 | 0.0 | |
| P11884 | 519 | Aldehyde dehydrogenase, m | yes | no | 0.985 | 0.803 | 0.613 | 1e-150 | |
| P81178 | 500 | Aldehyde dehydrogenase, m | N/A | no | 0.976 | 0.826 | 0.619 | 1e-150 | |
| P47738 | 519 | Aldehyde dehydrogenase, m | yes | no | 0.985 | 0.803 | 0.613 | 1e-150 | |
| P20000 | 520 | Aldehyde dehydrogenase, m | yes | no | 0.976 | 0.794 | 0.610 | 1e-149 | |
| Q2XQV4 | 521 | Aldehyde dehydrogenase, m | yes | no | 0.985 | 0.800 | 0.611 | 1e-149 | |
| P05091 | 517 | Aldehyde dehydrogenase, m | yes | no | 0.985 | 0.806 | 0.604 | 1e-148 | |
| O94788 | 518 | Retinal dehydrogenase 2 O | no | no | 0.985 | 0.805 | 0.582 | 1e-148 | |
| Q5RF00 | 517 | Aldehyde dehydrogenase, m | yes | no | 0.985 | 0.806 | 0.601 | 1e-148 |
| >sp|Q8S528|AL2B7_ARATH Aldehyde dehydrogenase family 2 member B7, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B7 PE=2 SV=2 | Back alignment and function desciption |
|---|
Score = 747 bits (1928), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/423 (82%), Positives = 387/423 (91%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
MTAYERSKI+ RFADL+E+HNDEIAALETWDNGKP+EQSAQ EVPM R+FRYYAGWADK
Sbjct: 112 MTAYERSKILFRFADLIEKHNDEIAALETWDNGKPYEQSAQIEVPMLARVFRYYAGWADK 171
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
I G+T P DGP+HVQTLHEPIGVAGQIIPWNFPLLM +WK+GPALACGNT+VLKTAEQTP
Sbjct: 172 IHGMTMPGDGPHHVQTLHEPIGVAGQIIPWNFPLLMLSWKLGPALACGNTVVLKTAEQTP 231
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
LSAL V KLLHEAGLP GV+NIVSG+G TAGAA+ASHM+VDK+AFTGST GKI+L+LA+
Sbjct: 232 LSALLVGKLLHEAGLPDGVVNIVSGFGATAGAAIASHMDVDKVAFTGSTDVGKIILELAS 291
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
KSNLK VTLELGGKSPFIVCEDADVD+A ELAH+ALFFNQGQCCCAGSRTFVHE VYD+F
Sbjct: 292 KSNLKAVTLELGGKSPFIVCEDADVDQAVELAHFALFFNQGQCCCAGSRTFVHERVYDEF 351
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 300
VEKA A A+KR VGDPFK GI+QGPQ+DSEQF KILKYI+ GV+ GA L+ GG+RLG+KG
Sbjct: 352 VEKAKARALKRNVGDPFKSGIEQGPQVDSEQFNKILKYIKHGVEAGATLQAGGDRLGSKG 411
Query: 301 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 360
YYI+PTVF+ VKDDMLIA DEIFGPVQ+ILK+KDLDEVI R+N S+YGLAAGVFT NLDT
Sbjct: 412 YYIQPTVFSDVKDDMLIATDEIFGPVQTILKFKDLDEVIARANNSRYGLAAGVFTQNLDT 471
Query: 361 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKNP 420
A+ LMRALRVG+VWINCFDV DA+IPFGGYK SG GREKG YSL+NYLQVKAVVT+LKNP
Sbjct: 472 AHRLMRALRVGTVWINCFDVLDASIPFGGYKMSGIGREKGIYSLNNYLQVKAVVTSLKNP 531
Query: 421 AWL 423
AWL
Sbjct: 532 AWL 534
|
Possesses activity on acetaldehyde and glycolaldehyde in vitro. Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 3 |
| >sp|Q9SU63|AL2B4_ARATH Aldehyde dehydrogenase family 2 member B4, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B4 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 718 bits (1854), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/423 (77%), Positives = 380/423 (89%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
M+AYERS+++LRFADL+E+H++E+A+LETWDNGKP++QS E+PM RLFRYYAGWADK
Sbjct: 116 MSAYERSRVLLRFADLVEKHSEELASLETWDNGKPYQQSLTAEIPMFARLFRYYAGWADK 175
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
I GLT PADG Y V TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP
Sbjct: 176 IHGLTIPADGNYQVHTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 235
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
L+A Y KL EAGLPPGVLNIVSG+G TAGAALASHM+VDKLAFTGST TGK++L LAA
Sbjct: 236 LTAFYAGKLFLEAGLPPGVLNIVSGFGATAGAALASHMDVDKLAFTGSTDTGKVILGLAA 295
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
SNLKPVTLELGGKSPFIV EDAD+DKA ELAH+ALFFNQGQCCCAGSRTFVHE VYD+F
Sbjct: 296 NSNLKPVTLELGGKSPFIVFEDADIDKAVELAHFALFFNQGQCCCAGSRTFVHEKVYDEF 355
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 300
VEK+ A A+KRVVGDPF+ GI+QGPQID +QFEK++KYI+SG++ A LE GG+++G KG
Sbjct: 356 VEKSKARALKRVVGDPFRKGIEQGPQIDLKQFEKVMKYIKSGIESNATLECGGDQIGDKG 415
Query: 301 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 360
Y+I+PTVF+ VKDDMLIA+DEIFGPVQSILK+ D+DEVI+R+N ++YGLAAGVFT NLDT
Sbjct: 416 YFIQPTVFSNVKDDMLIAQDEIFGPVQSILKFSDVDEVIKRANETKYGLAAGVFTKNLDT 475
Query: 361 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKNP 420
AN + RAL+ G+VW+NCFDVFDAAIPFGGYK SG GREKG YSL+NYLQ+KAVVTAL P
Sbjct: 476 ANRVSRALKAGTVWVNCFDVFDAAIPFGGYKMSGNGREKGIYSLNNYLQIKAVVTALNKP 535
Query: 421 AWL 423
AW+
Sbjct: 536 AWI 538
|
Possesses activity on acetaldehyde and glycolaldehyde in vitro. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|P11884|ALDH2_RAT Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Aldh2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 531 bits (1369), Expect = e-150, Method: Compositional matrix adjust.
Identities = 256/417 (61%), Positives = 309/417 (74%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
M A +R +++ R ADL+ER +AALET DNGKP+ S ++ M + RYYAGWADK
Sbjct: 98 MDASDRGRLLYRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADK 157
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
G T P DG + T HEP+GV GQIIPWNFPLLM AWK+GPALA GN +V+K AEQTP
Sbjct: 158 YHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTP 217
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
L+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH +VDK+AFTGST G ++ A
Sbjct: 218 LTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAG 277
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
SNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQCCCAGSRTFV E VYD+F
Sbjct: 278 SSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDVYDEF 337
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 300
VE++ A A RVVG+PF +QGPQ+D QF+KIL YI+SG GAKL GG +G
Sbjct: 338 VERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKILGYIKSGQQEGAKLLCGGGAAADRG 397
Query: 301 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 360
Y+I+PTVF VKD M IAK+EIFGPV ILK+K ++EV+ R+N S+YGLAA VFT +LD
Sbjct: 398 YFIQPTVFGDVKDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSKYGLAAAVFTKDLDK 457
Query: 361 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 417
AN L +AL+ G+VWINC+DVF A PFGGYK SG GRE G Y L Y +VK V +
Sbjct: 458 ANYLSQALQAGTVWINCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVKV 514
|
Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|P81178|ALDH2_MESAU Aldehyde dehydrogenase, mitochondrial OS=Mesocricetus auratus GN=ALDH2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 531 bits (1367), Expect = e-150, Method: Compositional matrix adjust.
Identities = 256/413 (61%), Positives = 308/413 (74%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
M A +R +++ R ADL+ER +AALET DNGKP+ S ++ M + RYYAGWADK
Sbjct: 79 MDASDRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADK 138
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
G T P DG + T HEP+GV GQIIPWNFPLLM AWK+GPALA GN +V+K AEQTP
Sbjct: 139 YHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTP 198
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
L+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH +VDK+AFTGST G ++ A
Sbjct: 199 LTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAG 258
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
SNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQCCCAGSRTFV E VYD+F
Sbjct: 259 SSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDVYDEF 318
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 300
VE++ A A RVVG+PF +QGPQ+D QF+KIL YI+SG GAKL GG +G
Sbjct: 319 VERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKILGYIKSGQQEGAKLLCGGGAAADRG 378
Query: 301 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 360
Y+I+PTVF VKD M IAK+EIFGPV ILK+K ++EV+ R+N S+YGLAA VFT +LD
Sbjct: 379 YFIQPTVFGDVKDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSKYGLAAAVFTKDLDK 438
Query: 361 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 413
AN L +AL+ G+VWINC+DVF A PFGGYK SG GRE G Y L Y +VK V
Sbjct: 439 ANYLSQALQAGTVWINCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTV 491
|
Mesocricetus auratus (taxid: 10036) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|P47738|ALDH2_MOUSE Aldehyde dehydrogenase, mitochondrial OS=Mus musculus GN=Aldh2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 530 bits (1365), Expect = e-150, Method: Compositional matrix adjust.
Identities = 256/417 (61%), Positives = 309/417 (74%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
M A +R +++ R ADL+ER +AALET DNGKP+ S ++ M + RYYAGWADK
Sbjct: 98 MDASDRGRLLYRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADK 157
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
G T P DG + T HEP+GV GQIIPWNFPLLM AWK+GPALA GN +V+K AEQTP
Sbjct: 158 YHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTP 217
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
L+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH VDK+AFTGST G ++ A
Sbjct: 218 LTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEGVDKVAFTGSTEVGHLIQVAAG 277
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
SNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQCCCAGSRTFV E+VYD+F
Sbjct: 278 SSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQENVYDEF 337
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 300
VE++ A A RVVG+PF +QGPQ+D QF+KIL YI+SG GAKL GG +G
Sbjct: 338 VERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKILGYIKSGQQEGAKLLCGGGAAADRG 397
Query: 301 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 360
Y+I+PTVF VKD M IAK+EIFGPV ILK+K ++EV+ R+N S+YGLAA VFT +LD
Sbjct: 398 YFIQPTVFGDVKDGMTIAKEEIFGPVMQILKFKTIEEVVGRANDSKYGLAAAVFTKDLDK 457
Query: 361 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 417
AN L +AL+ G+VWINC+DVF A PFGGYK SG GRE G Y L Y +VK V +
Sbjct: 458 ANYLSQALQAGTVWINCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVKV 514
|
Is capable of converting retinaldehyde to retinoic acid. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|P20000|ALDH2_BOVIN Aldehyde dehydrogenase, mitochondrial OS=Bos taurus GN=ALDH2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 528 bits (1360), Expect = e-149, Method: Compositional matrix adjust.
Identities = 252/413 (61%), Positives = 309/413 (74%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
M A ER +++ R ADL+ER +AALET DNGKP+ S ++ M + RYYAGWADK
Sbjct: 99 MDASERGRLLNRLADLIERDRTYLAALETLDNGKPYIISYLVDLDMVLKCLRYYAGWADK 158
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
G T P DG Y T HEP+GV GQIIPWNFPLLM AWK+GPALA GN +V+K AEQTP
Sbjct: 159 YHGKTIPIDGDYFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTP 218
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
L+ALYV+ L+ EAG PPGV+N++ G+GPTAGAA+ASH +VDK+AFTGST G ++ A
Sbjct: 219 LTALYVANLIKEAGFPPGVVNVIPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAG 278
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
KSNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQCCCAGSRTFV E +Y +F
Sbjct: 279 KSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYAEF 338
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 300
VE++ A A RVVG+PF +QGPQ+D QF+K+L YI+SG + GAKL GG +G
Sbjct: 339 VERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKVLGYIKSGKEEGAKLLCGGGAAADRG 398
Query: 301 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 360
Y+I+PTVF V+D M IAK+EIFGPV ILK+K ++EV+ R+N S+YGLAA VFT +LD
Sbjct: 399 YFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKSMEEVVGRANNSKYGLAAAVFTKDLDK 458
Query: 361 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 413
AN L +AL+ G+VW+NC+DVF A PFGGYK SG GRE G Y L Y +VK V
Sbjct: 459 ANYLSQALQAGTVWVNCYDVFGAQSPFGGYKLSGSGRELGEYGLQAYTEVKTV 511
|
Bos taurus (taxid: 9913) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|Q2XQV4|ALDH2_PIG Aldehyde dehydrogenase, mitochondrial OS=Sus scrofa GN=ALDH2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 527 bits (1358), Expect = e-149, Method: Compositional matrix adjust.
Identities = 255/417 (61%), Positives = 310/417 (74%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
+ A +R +++ R ADL+ER +AALET DNGKP+ S ++ M + RYYAGWADK
Sbjct: 100 LDASDRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADK 159
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
G T P DG Y T HEP+GV GQIIPWNFPLLM AWK+GPALA GN +V+K +EQTP
Sbjct: 160 YHGKTLPIDGDYFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVSEQTP 219
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
L+ALYV+ L+ EAG PPGV+NIV GYGPTAGAA+ASH +VDK+AFTGST G ++ A
Sbjct: 220 LTALYVANLIKEAGFPPGVVNIVPGYGPTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAG 279
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
KSNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQCCCAGSRTFV E +Y +F
Sbjct: 280 KSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYAEF 339
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 300
VE++ A A RVVG+PF +QGPQID QF+KIL YI+SG + GAKL GG +G
Sbjct: 340 VERSVARARSRVVGNPFDSRTEQGPQIDETQFKKILGYIKSGKEEGAKLLCGGGAAADRG 399
Query: 301 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 360
Y+I+PTVF V+D M IAK+EIFGPV ILK+K ++EVI R+N S+YGLAA VFT +LD
Sbjct: 400 YFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVIGRANNSKYGLAAAVFTKDLDK 459
Query: 361 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 417
AN L +AL+ G+VW+NC+DVF A PFGGYK SG GRE G Y L Y +VK V +
Sbjct: 460 ANYLSQALQAGTVWVNCYDVFGAQSPFGGYKLSGSGRELGEYGLQAYTEVKTVTVKV 516
|
Is capable of converting retinaldehyde to retinoic acid. Sus scrofa (taxid: 9823) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|P05091|ALDH2_HUMAN Aldehyde dehydrogenase, mitochondrial OS=Homo sapiens GN=ALDH2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 526 bits (1354), Expect = e-148, Method: Compositional matrix adjust.
Identities = 252/417 (60%), Positives = 307/417 (73%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
M A R +++ R ADL+ER +AALET DNGKP+ S ++ M + RYYAGWADK
Sbjct: 96 MDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADK 155
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
G T P DG + T HEP+GV GQIIPWNFPLLM AWK+GPALA GN +V+K AEQTP
Sbjct: 156 YHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTP 215
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
L+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH +VDK+AFTGST G+++ A
Sbjct: 216 LTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAG 275
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
SNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQCCCAGSRTFV E +YD+F
Sbjct: 276 SSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEF 335
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 300
VE++ A A RVVG+PF +QGPQ+D QF+KIL YI +G GAKL GG +G
Sbjct: 336 VERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRG 395
Query: 301 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 360
Y+I+PTVF V+D M IAK+EIFGPV ILK+K ++EV+ R+N S YGLAA VFT +LD
Sbjct: 396 YFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDK 455
Query: 361 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 417
AN L +AL+ G+VW+NC+DVF A PFGGYK SG GRE G Y L Y +VK V +
Sbjct: 456 ANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVKV 512
|
Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|O94788|AL1A2_HUMAN Retinal dehydrogenase 2 OS=Homo sapiens GN=ALDH1A2 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 524 bits (1350), Expect = e-148, Method: Compositional matrix adjust.
Identities = 243/417 (58%), Positives = 313/417 (75%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
M A ER +++ + ADL+ER +A +E+ + GKPF Q+ ++ + FRYYAGWADK
Sbjct: 97 MDASERGRLLDKLADLVERDRAVLATMESLNGGKPFLQAFYVDLQGVIKTFRYYAGWADK 156
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
I G+T P DG Y T HEPIGV GQIIPWNFPLLMFAWK+ PAL CGNT+V+K AEQTP
Sbjct: 157 IHGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFAWKIAPALCCGNTVVIKPAEQTP 216
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
LSALY+ L+ EAG PPGV+NI+ GYGPTAGAA+ASH+ +DK+AFTGST GK++ + A
Sbjct: 217 LSALYMGALIKEAGFPPGVINILPGYGPTAGAAIASHIGIDKIAFTGSTEVGKLIQEAAG 276
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
+SNLK VTLELGGKSP I+ DAD+D A E AH +FFNQGQCC AGSR FV ES+Y++F
Sbjct: 277 RSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIFVEESIYEEF 336
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 300
V ++ A +RVVG PF +QGPQID +Q+ KIL+ I+SGV GAKLE GG+ LG KG
Sbjct: 337 VRRSVERAKRRVVGSPFDPTTEQGPQIDKKQYNKILELIQSGVAEGAKLECGGKGLGRKG 396
Query: 301 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 360
++I+PTVF+ V DDM IAK+EIFGPVQ IL++K +DEVI+R+N S +GL A VFT++++
Sbjct: 397 FFIEPTVFSNVTDDMRIAKEEIFGPVQEILRFKTMDEVIERANNSDFGLVAAVFTNDINK 456
Query: 361 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 417
A T+ A++ G+VWINC++ +A PFGG+K SG GRE G + L Y +VK V +
Sbjct: 457 ALTVSSAMQAGTVWINCYNALNAQSPFGGFKMSGNGREMGEFGLREYSEVKTVTVKI 513
|
Recognizes as substrates free retinal and cellular retinol-binding protein-bound retinal. Does metabolize octanal and decanal but does not metabolize citral, benzaldehyde, acetaldehyde and propanal efficiently. Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 EC: 6 |
| >sp|Q5RF00|ALDH2_PONAB Aldehyde dehydrogenase, mitochondrial OS=Pongo abelii GN=ALDH2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 524 bits (1350), Expect = e-148, Method: Compositional matrix adjust.
Identities = 251/417 (60%), Positives = 307/417 (73%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
M A R +++ R ADL+ER +AALET DNGKP+ S ++ M + RYYAGWADK
Sbjct: 96 MDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADK 155
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
G T P DG + T HEP+GV GQIIPWNFPLLM AWK+GPALA GN +V+K AEQTP
Sbjct: 156 YHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTP 215
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
L+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH +VDK+AFTGST G+++ A
Sbjct: 216 LTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAG 275
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
SNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQCCCAGSRTFV E +YD+F
Sbjct: 276 SSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEF 335
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 300
VE++ A A RVVG+PF +QGPQ+D QF+KIL YI +G GAKL GG +G
Sbjct: 336 VERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRG 395
Query: 301 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 360
Y+I+PTVF V+D M IAK+EIFGPV ILK+K ++EV+ R+N S YGLAA VFT +LD
Sbjct: 396 YFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDK 455
Query: 361 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 417
AN L +AL+ G+VW+NC++VF A PFGGYK SG GRE G Y L Y +VK V +
Sbjct: 456 ANYLSQALQAGTVWVNCYNVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVKV 512
|
Is capable of converting retinaldehyde to retinoic acid. Pongo abelii (taxid: 9601) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 423 | ||||||
| 356497822 | 538 | PREDICTED: aldehyde dehydrogenase family | 1.0 | 0.786 | 0.841 | 0.0 | |
| 356501653 | 539 | PREDICTED: aldehyde dehydrogenase family | 1.0 | 0.784 | 0.841 | 0.0 | |
| 356526813 | 536 | PREDICTED: aldehyde dehydrogenase family | 1.0 | 0.789 | 0.841 | 0.0 | |
| 356567618 | 536 | PREDICTED: aldehyde dehydrogenase family | 1.0 | 0.789 | 0.848 | 0.0 | |
| 225424691 | 538 | PREDICTED: aldehyde dehydrogenase family | 1.0 | 0.786 | 0.841 | 0.0 | |
| 224064707 | 540 | predicted protein [Populus trichocarpa] | 1.0 | 0.783 | 0.827 | 0.0 | |
| 223452696 | 534 | mitochondrial benzaldehyde dehydrogenase | 1.0 | 0.792 | 0.834 | 0.0 | |
| 29373073 | 542 | aldehyde dehydrogenase 1 precursor [Lotu | 1.0 | 0.780 | 0.825 | 0.0 | |
| 356548623 | 540 | PREDICTED: aldehyde dehydrogenase family | 1.0 | 0.783 | 0.810 | 0.0 | |
| 449482989 | 540 | PREDICTED: aldehyde dehydrogenase family | 1.0 | 0.783 | 0.822 | 0.0 |
| >gi|356497822|ref|XP_003517756.1| PREDICTED: aldehyde dehydrogenase family 2 member B7, mitochondrial-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 774 bits (1999), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/423 (84%), Positives = 394/423 (93%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
MTAYER +I+LR ADL E+HNDE+AALETWDNGKP+EQSAQ E+PM RLFRYYAGWADK
Sbjct: 116 MTAYERQRILLRAADLFEKHNDELAALETWDNGKPYEQSAQIEIPMLVRLFRYYAGWADK 175
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
I GLT PADGPYHVQTLHEPIGVAGQIIPWNFPL+MFAWKVGPALACGNTIVLKTAEQTP
Sbjct: 176 IHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPLVMFAWKVGPALACGNTIVLKTAEQTP 235
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
LSALY SKLLHEAGLPPGVLN++SG+GPTAGAA+ASHM++DKLAFTGST TGK+VL+LAA
Sbjct: 236 LSALYASKLLHEAGLPPGVLNVISGFGPTAGAAIASHMDIDKLAFTGSTETGKVVLELAA 295
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
+SNLKPVTLELGGKSPFIVCEDADVD+A ELAH+ALFFNQGQCCCAGSRTFVHE VYD+F
Sbjct: 296 RSNLKPVTLELGGKSPFIVCEDADVDEAVELAHFALFFNQGQCCCAGSRTFVHERVYDEF 355
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 300
+EKA A A+KR VGDPFKGGI+QGPQIDSEQF+KILKYIRSGV+ GA LETGG+R G G
Sbjct: 356 IEKAKARALKRAVGDPFKGGIEQGPQIDSEQFQKILKYIRSGVESGATLETGGDRFGNSG 415
Query: 301 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 360
+YI+PTVF+ VKDDMLIAK+EIFGPVQ+ILK+KDLD+VIQR+N + YGLAAGVFT N++T
Sbjct: 416 FYIQPTVFSNVKDDMLIAKEEIFGPVQTILKFKDLDDVIQRANNTHYGLAAGVFTKNINT 475
Query: 361 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKNP 420
ANTL RALRVG+VWINCFD FDAAIPFGGYK SGQGREKG YSL NYLQVKAVVT+LKNP
Sbjct: 476 ANTLTRALRVGTVWINCFDTFDAAIPFGGYKMSGQGREKGEYSLKNYLQVKAVVTSLKNP 535
Query: 421 AWL 423
AWL
Sbjct: 536 AWL 538
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356501653|ref|XP_003519638.1| PREDICTED: aldehyde dehydrogenase family 2 member B7, mitochondrial-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 773 bits (1996), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/423 (84%), Positives = 393/423 (92%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
MTAYER +I+LR ADL E+HND++AALETWDNGKP+EQSAQ E+PM RLFRYYAGWADK
Sbjct: 117 MTAYERQRILLRAADLFEKHNDDLAALETWDNGKPYEQSAQIEIPMLVRLFRYYAGWADK 176
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
I GLT PADGPYHVQTLHEPIGVAGQIIPWNFPL+MFAWKVGPALACGNTIVLKTAEQTP
Sbjct: 177 IHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPLVMFAWKVGPALACGNTIVLKTAEQTP 236
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
LSALY SKLLHEAGLPPGVLNI+SG+GPTAGAA+ASHM++DKLAFTGST TGKIVL+LAA
Sbjct: 237 LSALYASKLLHEAGLPPGVLNIISGFGPTAGAAIASHMDIDKLAFTGSTETGKIVLELAA 296
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
+SNLKPVTLELGGKSPFIVCEDADVD+A ELAH+ALFFNQGQCCCAGSRTFVHE VYD+F
Sbjct: 297 RSNLKPVTLELGGKSPFIVCEDADVDEAVELAHFALFFNQGQCCCAGSRTFVHERVYDEF 356
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 300
+EKA A A+KR VGDPFKGGI+QGPQIDSEQF+KILKYIRSGV+ GA LETGG+R G G
Sbjct: 357 IEKAKARALKRAVGDPFKGGIEQGPQIDSEQFQKILKYIRSGVESGATLETGGDRFGNSG 416
Query: 301 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 360
+YI+PTVF+ VKDDMLIAK+EIFGPVQSILK+KDLD+VIQR+N + YGLAAGVFT N++T
Sbjct: 417 FYIQPTVFSNVKDDMLIAKEEIFGPVQSILKFKDLDDVIQRANNTHYGLAAGVFTKNINT 476
Query: 361 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKNP 420
ANTL RALR G+VW+NCFD FDAAIPFGGYK SGQGREKG YSL NYLQVKAVVT+LKNP
Sbjct: 477 ANTLTRALRAGTVWVNCFDTFDAAIPFGGYKMSGQGREKGEYSLKNYLQVKAVVTSLKNP 536
Query: 421 AWL 423
AWL
Sbjct: 537 AWL 539
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356526813|ref|XP_003532011.1| PREDICTED: aldehyde dehydrogenase family 2 member B4, mitochondrial-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 767 bits (1980), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/423 (84%), Positives = 393/423 (92%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
MTAYER +I+LR ADL+E+HNDE+AALETWDNGKP+EQ+A+ EVPM RL RYYAGWADK
Sbjct: 114 MTAYERQRILLRVADLIEKHNDELAALETWDNGKPYEQAAKIEVPMLVRLIRYYAGWADK 173
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
I GLT PADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP
Sbjct: 174 IHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 233
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
LSALY +KL HEAGLP GVLN+VSG+GPTAGAALASHMEVDKLAFTGST TGK+VL+LAA
Sbjct: 234 LSALYAAKLFHEAGLPAGVLNVVSGFGPTAGAALASHMEVDKLAFTGSTDTGKVVLELAA 293
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
KSNLKPVTLELGGKSPFIVCEDADVD+A ELAH+ALFFNQGQCCCAGSRTFVHE+VY++F
Sbjct: 294 KSNLKPVTLELGGKSPFIVCEDADVDQAVELAHFALFFNQGQCCCAGSRTFVHENVYEEF 353
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 300
V+KA A A++RVVGDPFKGGI+QGPQIDS+QFEKIL+YIRSGV+ GA LETGG++LG KG
Sbjct: 354 VQKAKARALRRVVGDPFKGGIEQGPQIDSDQFEKILRYIRSGVESGATLETGGDKLGNKG 413
Query: 301 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 360
+YI+PTVF+ VKD MLIAKDEIFGPVQSILK+KDL EV+QR+N ++YGLAAGVFT N+DT
Sbjct: 414 FYIQPTVFSNVKDGMLIAKDEIFGPVQSILKFKDLGEVVQRANNTRYGLAAGVFTKNMDT 473
Query: 361 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKNP 420
ANTL RALRVG+VWINCFD FDAAIPFGGYK SGQGREKG YSL NYLQVKAVV LKNP
Sbjct: 474 ANTLTRALRVGTVWINCFDTFDAAIPFGGYKMSGQGREKGEYSLKNYLQVKAVVNPLKNP 533
Query: 421 AWL 423
AWL
Sbjct: 534 AWL 536
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356567618|ref|XP_003552014.1| PREDICTED: aldehyde dehydrogenase family 2 member B4, mitochondrial-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 766 bits (1979), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/423 (84%), Positives = 392/423 (92%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
MTAYER +I+LR ADLLE+HNDE+AALETWDNGKP+EQ+A+ EVPM RL RYYAGWADK
Sbjct: 114 MTAYERQRILLRAADLLEKHNDELAALETWDNGKPYEQAAKIEVPMLVRLIRYYAGWADK 173
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
I GLT PADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP
Sbjct: 174 IHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 233
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
LSALY +KL HEAGLP GVLN+VSG+GPTAGAALASHMEVDKLAFTGST TGK+VL+LAA
Sbjct: 234 LSALYAAKLFHEAGLPAGVLNVVSGFGPTAGAALASHMEVDKLAFTGSTDTGKVVLELAA 293
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
KSNLKPVTLELGGKSPFIVCEDADVD+A ELAH+ALFFNQGQCCCAGSRTFVHESVYD+F
Sbjct: 294 KSNLKPVTLELGGKSPFIVCEDADVDQAVELAHFALFFNQGQCCCAGSRTFVHESVYDEF 353
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 300
VEKA A A+KRVVGDPFKGGI+QGPQIDS+QFEKIL+YIRSGV+ GA LETGG++LG KG
Sbjct: 354 VEKAKARALKRVVGDPFKGGIEQGPQIDSDQFEKILRYIRSGVESGATLETGGDKLGNKG 413
Query: 301 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 360
+YI+PTVF+ VKD MLIA+DEIFGPVQSILK+KDL EV+QR+N ++YGLAAGVFT N+DT
Sbjct: 414 FYIQPTVFSNVKDGMLIARDEIFGPVQSILKFKDLGEVVQRANNTRYGLAAGVFTTNMDT 473
Query: 361 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKNP 420
A TL RALRVG+VWINCFD FDAAIPFGGYK SGQGREKG YSL NYLQVKAVV LKNP
Sbjct: 474 AYTLTRALRVGTVWINCFDTFDAAIPFGGYKMSGQGREKGEYSLKNYLQVKAVVNPLKNP 533
Query: 421 AWL 423
AWL
Sbjct: 534 AWL 536
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225424691|ref|XP_002263479.1| PREDICTED: aldehyde dehydrogenase family 2 member B4, mitochondrial [Vitis vinifera] gi|296086543|emb|CBI32132.3| unnamed protein product [Vitis vinifera] gi|426204222|gb|AFY12671.1| mitochondrial aldehyde dehydrogenase 2B8 [Vitis quinquangularis] | Back alignment and taxonomy information |
|---|
Score = 764 bits (1973), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/423 (84%), Positives = 392/423 (92%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
M+ YERSKI+LRFADLLE+HNDEIAALETWDNGKPFEQ+A+ EVP+ RL RYYAGWADK
Sbjct: 116 MSPYERSKILLRFADLLEKHNDEIAALETWDNGKPFEQAAKAEVPLVIRLMRYYAGWADK 175
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
I GLT PADG + VQTLHEPIGVAGQIIPWNFPLLM+AWK+GPALACGNTIVLKTAEQTP
Sbjct: 176 IHGLTVPADGLHQVQTLHEPIGVAGQIIPWNFPLLMYAWKIGPALACGNTIVLKTAEQTP 235
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
LSALY SKLLHEAGLPPGVLN+VSGYGPTAGAALASHM+VDKLAFTGST TGKIVLQLAA
Sbjct: 236 LSALYASKLLHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLAFTGSTATGKIVLQLAA 295
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
+SNLKPVTLELGGKSPFIVCEDA+VD+A ELAH+ALFFNQGQCCCAGSRTFVHES+YD+F
Sbjct: 296 RSNLKPVTLELGGKSPFIVCEDANVDEAVELAHFALFFNQGQCCCAGSRTFVHESIYDEF 355
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 300
VEKA A A++R VGDPFK GI+QGPQIDS+QFEKIL+YIRSGV+ GA LETGGER G +G
Sbjct: 356 VEKAKARALRRTVGDPFKAGIEQGPQIDSDQFEKILRYIRSGVENGATLETGGERFGKEG 415
Query: 301 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 360
++IKPTVF+ V+D MLIA+DEIFGPVQSILK+KDL EVI+R+NA+ YGLAAGVFT NLDT
Sbjct: 416 FFIKPTVFSNVQDGMLIAQDEIFGPVQSILKFKDLGEVIRRANATSYGLAAGVFTQNLDT 475
Query: 361 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKNP 420
ANTL RAL+VG+VWINCFDVFDAAIPFGGYK SG GREKG YSL NYLQVKAV+T LKNP
Sbjct: 476 ANTLTRALKVGTVWINCFDVFDAAIPFGGYKMSGHGREKGIYSLQNYLQVKAVITPLKNP 535
Query: 421 AWL 423
AWL
Sbjct: 536 AWL 538
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224064707|ref|XP_002301540.1| predicted protein [Populus trichocarpa] gi|222843266|gb|EEE80813.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 759 bits (1959), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/423 (82%), Positives = 391/423 (92%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
MTAYERS+II RFADLLE+H DEIAALETWDNGKP+EQSA+ E+PMT R+FRYYAGWADK
Sbjct: 118 MTAYERSRIIWRFADLLEKHTDEIAALETWDNGKPYEQSAKIEIPMTVRIFRYYAGWADK 177
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
I GLT PADGPYHVQTLHEPIGVAGQIIPWNFP+LMF+WKVGPALACGNT+V+KTAEQTP
Sbjct: 178 IHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPMLMFSWKVGPALACGNTVVIKTAEQTP 237
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
LSA+Y +KL HEAGLP GVLN+VSG+GPTAGAALASHM+VDKLAFTGST TGKIVL+LA+
Sbjct: 238 LSAVYAAKLFHEAGLPDGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLELAS 297
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
KSNLKPVTLELGGKSPFIVCEDADVD+A EL+H A+FFNQGQCCCAGSRTFVHE VYD+F
Sbjct: 298 KSNLKPVTLELGGKSPFIVCEDADVDQAVELSHSAVFFNQGQCCCAGSRTFVHERVYDEF 357
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 300
VEKA A A +R VGDPFK GI+QGPQ+DS+QFEKIL+ IRSGV+ GA L+ GG+R G G
Sbjct: 358 VEKAKARANQRAVGDPFKEGIEQGPQVDSDQFEKILRIIRSGVESGANLKAGGDRFGTTG 417
Query: 301 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 360
YYI+PTVF+ V+DDMLIAK+EIFGPVQSI K+KDLDEVIQRSN S+YGLAAG+FTHNLDT
Sbjct: 418 YYIQPTVFSDVQDDMLIAKEEIFGPVQSIFKFKDLDEVIQRSNNSRYGLAAGIFTHNLDT 477
Query: 361 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKNP 420
ANTL RAL+VG+VWINC+DVFDAAIPFGGYK SG GREKG YSL+NYLQVKAVVT+LKNP
Sbjct: 478 ANTLSRALKVGTVWINCYDVFDAAIPFGGYKMSGNGREKGIYSLNNYLQVKAVVTSLKNP 537
Query: 421 AWL 423
AWL
Sbjct: 538 AWL 540
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|223452696|gb|ACM89738.1| mitochondrial benzaldehyde dehydrogenase [Antirrhinum majus] | Back alignment and taxonomy information |
|---|
Score = 758 bits (1958), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/423 (83%), Positives = 387/423 (91%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
M AYER KI+LRFADL+E+HNDE+AALE WD+GKP+EQ AQ E+PM RLFRYYAGWADK
Sbjct: 112 MPAYERQKIMLRFADLVEKHNDEVAALEAWDSGKPYEQCAQVEIPMFVRLFRYYAGWADK 171
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
I GLT PADGP+HVQTLHEPIGVAGQIIPWNFPL+MF WKVGPALACGN++VLKTAEQTP
Sbjct: 172 IHGLTIPADGPHHVQTLHEPIGVAGQIIPWNFPLVMFGWKVGPALACGNSVVLKTAEQTP 231
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
LSAL VSKL HEAGLP GVLNIVSG+GPTAGAAL HM+VDKLAFTGST TGKIVL+L+A
Sbjct: 232 LSALLVSKLFHEAGLPEGVLNIVSGFGPTAGAALCRHMDVDKLAFTGSTETGKIVLELSA 291
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
KSNLKPVTLELGGKSPFIVCEDADVDKA ELAH+ALFFNQGQCCCAGSRTFVHE VYD+F
Sbjct: 292 KSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHEKVYDEF 351
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 300
VEKA A A+KR VGDPFK G++QGPQ+D++QFEKILKYIRSG + GA LETGG+RLG KG
Sbjct: 352 VEKAKARALKRTVGDPFKAGMEQGPQVDADQFEKILKYIRSGAESGATLETGGDRLGTKG 411
Query: 301 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 360
YYI+PTVF+ VKDDMLIAKDEIFGPVQ+ILK+K+LDEVI+R+N S YGLAAGVFT NLDT
Sbjct: 412 YYIQPTVFSDVKDDMLIAKDEIFGPVQTILKFKELDEVIRRANNSSYGLAAGVFTQNLDT 471
Query: 361 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKNP 420
ANT+MRALR G+VWINCFD FDAAIPFGGYK SG GREKG YSL NYLQVKAVVTALKNP
Sbjct: 472 ANTMMRALRAGTVWINCFDTFDAAIPFGGYKMSGIGREKGEYSLKNYLQVKAVVTALKNP 531
Query: 421 AWL 423
AWL
Sbjct: 532 AWL 534
|
Source: Antirrhinum majus Species: Antirrhinum majus Genus: Antirrhinum Family: Plantaginaceae Order: Lamiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|29373073|gb|AAO72532.1| aldehyde dehydrogenase 1 precursor [Lotus corniculatus] | Back alignment and taxonomy information |
|---|
Score = 752 bits (1941), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/423 (82%), Positives = 392/423 (92%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
MTAYERS+I+LRFADL+E+HNDEIAALETW+NGKP+EQ+A+ EVP RLFRYYAGWADK
Sbjct: 120 MTAYERSRILLRFADLVEKHNDEIAALETWNNGKPYEQAAKAEVPTFVRLFRYYAGWADK 179
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
I GLT PADG YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP
Sbjct: 180 IHGLTVPADGNYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 239
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
L+AL V+KLLHEAGLPPGVLNIVSGYGPTAGA LASHM+VDKLAFTGST TGK+VL LAA
Sbjct: 240 LTALVVAKLLHEAGLPPGVLNIVSGYGPTAGAPLASHMDVDKLAFTGSTDTGKVVLGLAA 299
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
KSNLKPVTLELGGKSPFIVCEDADVDKA ELAH+ALFFNQGQCCCAGSRTFVHE VYD+F
Sbjct: 300 KSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDEF 359
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 300
+EK+ A++RVVGDPFK G++QGPQID+EQFEKIL+YI+SG++ A LE GG+RLG+KG
Sbjct: 360 LEKSKKRALRRVVGDPFKKGVEQGPQIDTEQFEKILRYIKSGIESNATLECGGDRLGSKG 419
Query: 301 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 360
+Y++PTVF+ V+DDMLIA+DEIFGPVQ+I K+K++DEVI+R+N+++YGLAAGVFT NL T
Sbjct: 420 FYVQPTVFSNVQDDMLIAQDEIFGPVQTIFKFKEIDEVIRRANSTRYGLAAGVFTQNLAT 479
Query: 361 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKNP 420
ANTLMRALR G+VWINCFDVFDAAIPFGGYK SG GREKG YSL NYLQVKAVVT LKNP
Sbjct: 480 ANTLMRALRAGTVWINCFDVFDAAIPFGGYKMSGIGREKGIYSLHNYLQVKAVVTPLKNP 539
Query: 421 AWL 423
AWL
Sbjct: 540 AWL 542
|
Source: Lotus corniculatus Species: Lotus corniculatus Genus: Lotus Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356548623|ref|XP_003542700.1| PREDICTED: aldehyde dehydrogenase family 2 member B4, mitochondrial-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 751 bits (1938), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/423 (81%), Positives = 393/423 (92%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
MTAYERS+IILRFADLLE+HNDE+AA+ETWD+GK +EQ+A E+PM RLFRYYAGWADK
Sbjct: 118 MTAYERSRIILRFADLLEKHNDEVAAIETWDSGKTYEQAANVEIPMVVRLFRYYAGWADK 177
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
I GLT PADGPYHVQTLHEPIGVAGQI+PWNFPLL+F+WKV PALACGNT+V+KTAEQTP
Sbjct: 178 IHGLTVPADGPYHVQTLHEPIGVAGQIVPWNFPLLIFSWKVAPALACGNTVVMKTAEQTP 237
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
LSALYVSKL EAGLPPGVLN++SG+GPTAGAAL SHM+VDKLAFTGST+TGK VL+L+A
Sbjct: 238 LSALYVSKLFLEAGLPPGVLNVISGFGPTAGAALCSHMDVDKLAFTGSTSTGKRVLELSA 297
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
SNLKPVTLELGGKSPFIVC+DADVD A E +H+ALFFNQGQCCCAGSRTFVHES+Y +F
Sbjct: 298 HSNLKPVTLELGGKSPFIVCKDADVDAAVEASHFALFFNQGQCCCAGSRTFVHESIYGEF 357
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 300
VEKA A A+KRVVGDPFK G++QGPQIDS QFEKI+KYIRSGV+ GA+LE+GG+R+G+KG
Sbjct: 358 VEKAKARALKRVVGDPFKNGVEQGPQIDSVQFEKIMKYIRSGVESGAQLESGGQRIGSKG 417
Query: 301 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 360
YYI+PTVF+ V+D+MLIAKDEIFGPVQSILK+KDL+EVI+R+NA+ YGLAAGVFT N+DT
Sbjct: 418 YYIQPTVFSNVQDNMLIAKDEIFGPVQSILKFKDLEEVIRRANATSYGLAAGVFTKNMDT 477
Query: 361 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKNP 420
ANTLMRAL+ G+VWINC+DVFDAAIPFGGYK SGQGR +G YSL +YLQVKAVVTALKNP
Sbjct: 478 ANTLMRALQAGTVWINCYDVFDAAIPFGGYKMSGQGRVRGIYSLRSYLQVKAVVTALKNP 537
Query: 421 AWL 423
AWL
Sbjct: 538 AWL 540
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449482989|ref|XP_004156463.1| PREDICTED: aldehyde dehydrogenase family 2 member B4, mitochondrial-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 749 bits (1935), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/423 (82%), Positives = 388/423 (91%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
MTAYERSKI+LRFADL+E+H +E+AALETWDNGK +EQS + E+PM RLFRYY GWADK
Sbjct: 118 MTAYERSKIMLRFADLVEKHAEEVAALETWDNGKTYEQSLKIEIPMFVRLFRYYGGWADK 177
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
I GLT PADG YHVQTLHEPIGVAGQIIPWNFPL+MFAWKVGPALACGNTIVLKTAEQTP
Sbjct: 178 IHGLTVPADGSYHVQTLHEPIGVAGQIIPWNFPLVMFAWKVGPALACGNTIVLKTAEQTP 237
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
LSAL V+KL HEAGLP GVLNIVSGYGPTAGAALASHMEVDKLAFTGST TGK+VL+LA+
Sbjct: 238 LSALLVAKLFHEAGLPEGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTETGKVVLELAS 297
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
KSNLKPVTLELGGKSPFIVCEDADVDKA E+AH+ALFFNQGQCCCAGSRTFVHE V+D+F
Sbjct: 298 KSNLKPVTLELGGKSPFIVCEDADVDKAVEMAHFALFFNQGQCCCAGSRTFVHEKVHDEF 357
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 300
VEKA A RVVGDPF GGI+QGPQ+D+EQF+KILKYI+ G++GGA LE GG+R G+KG
Sbjct: 358 VEKARNRAANRVVGDPFLGGIEQGPQVDAEQFKKILKYIKYGIEGGATLEAGGDRFGSKG 417
Query: 301 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 360
YY++PTVF+ VKDDM IA+DEIFGPVQ+ILKYKD+DEVI+R+NAS+YGLAAGVFT N++T
Sbjct: 418 YYVQPTVFSNVKDDMKIAEDEIFGPVQTILKYKDIDEVIRRANASRYGLAAGVFTQNINT 477
Query: 361 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKNP 420
AN L R+LRVGSVWINCFDVFDAA+PFGGYK SG GREKG YSLSNYLQVKAVVT L+NP
Sbjct: 478 ANRLTRSLRVGSVWINCFDVFDAAVPFGGYKMSGHGREKGIYSLSNYLQVKAVVTPLENP 537
Query: 421 AWL 423
AWL
Sbjct: 538 AWL 540
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 423 | ||||||
| TAIR|locus:2034855 | 534 | ALDH2B7 "AT1G23800" [Arabidops | 1.0 | 0.792 | 0.820 | 4e-193 | |
| TAIR|locus:2097845 | 538 | ALDH2B4 "AT3G48000" [Arabidops | 1.0 | 0.786 | 0.777 | 5e-186 | |
| RGD|69219 | 519 | Aldh2 "aldehyde dehydrogenase | 0.976 | 0.795 | 0.619 | 1.7e-137 | |
| MGI|MGI:99600 | 519 | Aldh2 "aldehyde dehydrogenase | 0.976 | 0.795 | 0.619 | 3.6e-137 | |
| UNIPROTKB|P20000 | 520 | ALDH2 "Aldehyde dehydrogenase, | 0.976 | 0.794 | 0.610 | 9.5e-137 | |
| UNIPROTKB|Q2XQV4 | 521 | ALDH2 "Aldehyde dehydrogenase, | 0.976 | 0.792 | 0.617 | 9.5e-137 | |
| UNIPROTKB|F1PBJ8 | 521 | ALDH2 "Uncharacterized protein | 0.976 | 0.792 | 0.619 | 3.2e-136 | |
| UNIPROTKB|P05091 | 517 | ALDH2 "Aldehyde dehydrogenase, | 0.976 | 0.798 | 0.610 | 8.5e-136 | |
| UNIPROTKB|E1BT93 | 519 | ALDH2 "Uncharacterized protein | 0.976 | 0.795 | 0.593 | 1.4e-135 | |
| ZFIN|ZDB-GENE-030326-5 | 516 | aldh2.2 "aldehyde dehydrogenas | 0.976 | 0.800 | 0.598 | 2.9e-135 |
| TAIR|locus:2034855 ALDH2B7 "AT1G23800" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1871 (663.7 bits), Expect = 4.0e-193, P = 4.0e-193
Identities = 347/423 (82%), Positives = 387/423 (91%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
MTAYERSKI+ RFADL+E+HNDEIAALETWDNGKP+EQSAQ EVPM R+FRYYAGWADK
Sbjct: 112 MTAYERSKILFRFADLIEKHNDEIAALETWDNGKPYEQSAQIEVPMLARVFRYYAGWADK 171
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
I G+T P DGP+HVQTLHEPIGVAGQIIPWNFPLLM +WK+GPALACGNT+VLKTAEQTP
Sbjct: 172 IHGMTMPGDGPHHVQTLHEPIGVAGQIIPWNFPLLMLSWKLGPALACGNTVVLKTAEQTP 231
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
LSAL V KLLHEAGLP GV+NIVSG+G TAGAA+ASHM+VDK+AFTGST GKI+L+LA+
Sbjct: 232 LSALLVGKLLHEAGLPDGVVNIVSGFGATAGAAIASHMDVDKVAFTGSTDVGKIILELAS 291
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
KSNLK VTLELGGKSPFIVCEDADVD+A ELAH+ALFFNQGQCCCAGSRTFVHE VYD+F
Sbjct: 292 KSNLKAVTLELGGKSPFIVCEDADVDQAVELAHFALFFNQGQCCCAGSRTFVHERVYDEF 351
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 300
VEKA A A+KR VGDPFK GI+QGPQ+DSEQF KILKYI+ GV+ GA L+ GG+RLG+KG
Sbjct: 352 VEKAKARALKRNVGDPFKSGIEQGPQVDSEQFNKILKYIKHGVEAGATLQAGGDRLGSKG 411
Query: 301 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 360
YYI+PTVF+ VKDDMLIA DEIFGPVQ+ILK+KDLDEVI R+N S+YGLAAGVFT NLDT
Sbjct: 412 YYIQPTVFSDVKDDMLIATDEIFGPVQTILKFKDLDEVIARANNSRYGLAAGVFTQNLDT 471
Query: 361 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKNP 420
A+ LMRALRVG+VWINCFDV DA+IPFGGYK SG GREKG YSL+NYLQVKAVVT+LKNP
Sbjct: 472 AHRLMRALRVGTVWINCFDVLDASIPFGGYKMSGIGREKGIYSLNNYLQVKAVVTSLKNP 531
Query: 421 AWL 423
AWL
Sbjct: 532 AWL 534
|
|
| TAIR|locus:2097845 ALDH2B4 "AT3G48000" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1804 (640.1 bits), Expect = 5.0e-186, P = 5.0e-186
Identities = 329/423 (77%), Positives = 380/423 (89%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
M+AYERS+++LRFADL+E+H++E+A+LETWDNGKP++QS E+PM RLFRYYAGWADK
Sbjct: 116 MSAYERSRVLLRFADLVEKHSEELASLETWDNGKPYQQSLTAEIPMFARLFRYYAGWADK 175
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
I GLT PADG Y V TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP
Sbjct: 176 IHGLTIPADGNYQVHTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 235
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
L+A Y KL EAGLPPGVLNIVSG+G TAGAALASHM+VDKLAFTGST TGK++L LAA
Sbjct: 236 LTAFYAGKLFLEAGLPPGVLNIVSGFGATAGAALASHMDVDKLAFTGSTDTGKVILGLAA 295
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
SNLKPVTLELGGKSPFIV EDAD+DKA ELAH+ALFFNQGQCCCAGSRTFVHE VYD+F
Sbjct: 296 NSNLKPVTLELGGKSPFIVFEDADIDKAVELAHFALFFNQGQCCCAGSRTFVHEKVYDEF 355
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 300
VEK+ A A+KRVVGDPF+ GI+QGPQID +QFEK++KYI+SG++ A LE GG+++G KG
Sbjct: 356 VEKSKARALKRVVGDPFRKGIEQGPQIDLKQFEKVMKYIKSGIESNATLECGGDQIGDKG 415
Query: 301 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 360
Y+I+PTVF+ VKDDMLIA+DEIFGPVQSILK+ D+DEVI+R+N ++YGLAAGVFT NLDT
Sbjct: 416 YFIQPTVFSNVKDDMLIAQDEIFGPVQSILKFSDVDEVIKRANETKYGLAAGVFTKNLDT 475
Query: 361 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKNP 420
AN + RAL+ G+VW+NCFDVFDAAIPFGGYK SG GREKG YSL+NYLQ+KAVVTAL P
Sbjct: 476 ANRVSRALKAGTVWVNCFDVFDAAIPFGGYKMSGNGREKGIYSLNNYLQIKAVVTALNKP 535
Query: 421 AWL 423
AW+
Sbjct: 536 AWI 538
|
|
| RGD|69219 Aldh2 "aldehyde dehydrogenase 2 family (mitochondrial)" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 1346 (478.9 bits), Expect = 1.7e-137, P = 1.7e-137
Identities = 256/413 (61%), Positives = 308/413 (74%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
M A +R +++ R ADL+ER +AALET DNGKP+ S ++ M + RYYAGWADK
Sbjct: 98 MDASDRGRLLYRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADK 157
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
G T P DG + T HEP+GV GQIIPWNFPLLM AWK+GPALA GN +V+K AEQTP
Sbjct: 158 YHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTP 217
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
L+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH +VDK+AFTGST G ++ A
Sbjct: 218 LTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAG 277
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
SNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQCCCAGSRTFV E VYD+F
Sbjct: 278 SSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDVYDEF 337
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 300
VE++ A A RVVG+PF +QGPQ+D QF+KIL YI+SG GAKL GG +G
Sbjct: 338 VERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKILGYIKSGQQEGAKLLCGGGAAADRG 397
Query: 301 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 360
Y+I+PTVF VKD M IAK+EIFGPV ILK+K ++EV+ R+N S+YGLAA VFT +LD
Sbjct: 398 YFIQPTVFGDVKDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSKYGLAAAVFTKDLDK 457
Query: 361 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 413
AN L +AL+ G+VWINC+DVF A PFGGYK SG GRE G Y L Y +VK V
Sbjct: 458 ANYLSQALQAGTVWINCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTV 510
|
|
| MGI|MGI:99600 Aldh2 "aldehyde dehydrogenase 2, mitochondrial" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 1343 (477.8 bits), Expect = 3.6e-137, P = 3.6e-137
Identities = 256/413 (61%), Positives = 308/413 (74%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
M A +R +++ R ADL+ER +AALET DNGKP+ S ++ M + RYYAGWADK
Sbjct: 98 MDASDRGRLLYRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADK 157
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
G T P DG + T HEP+GV GQIIPWNFPLLM AWK+GPALA GN +V+K AEQTP
Sbjct: 158 YHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTP 217
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
L+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH VDK+AFTGST G ++ A
Sbjct: 218 LTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEGVDKVAFTGSTEVGHLIQVAAG 277
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
SNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQCCCAGSRTFV E+VYD+F
Sbjct: 278 SSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQENVYDEF 337
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 300
VE++ A A RVVG+PF +QGPQ+D QF+KIL YI+SG GAKL GG +G
Sbjct: 338 VERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKILGYIKSGQQEGAKLLCGGGAAADRG 397
Query: 301 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 360
Y+I+PTVF VKD M IAK+EIFGPV ILK+K ++EV+ R+N S+YGLAA VFT +LD
Sbjct: 398 YFIQPTVFGDVKDGMTIAKEEIFGPVMQILKFKTIEEVVGRANDSKYGLAAAVFTKDLDK 457
Query: 361 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 413
AN L +AL+ G+VWINC+DVF A PFGGYK SG GRE G Y L Y +VK V
Sbjct: 458 ANYLSQALQAGTVWINCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTV 510
|
|
| UNIPROTKB|P20000 ALDH2 "Aldehyde dehydrogenase, mitochondrial" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1339 (476.4 bits), Expect = 9.5e-137, P = 9.5e-137
Identities = 252/413 (61%), Positives = 309/413 (74%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
M A ER +++ R ADL+ER +AALET DNGKP+ S ++ M + RYYAGWADK
Sbjct: 99 MDASERGRLLNRLADLIERDRTYLAALETLDNGKPYIISYLVDLDMVLKCLRYYAGWADK 158
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
G T P DG Y T HEP+GV GQIIPWNFPLLM AWK+GPALA GN +V+K AEQTP
Sbjct: 159 YHGKTIPIDGDYFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTP 218
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
L+ALYV+ L+ EAG PPGV+N++ G+GPTAGAA+ASH +VDK+AFTGST G ++ A
Sbjct: 219 LTALYVANLIKEAGFPPGVVNVIPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAG 278
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
KSNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQCCCAGSRTFV E +Y +F
Sbjct: 279 KSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYAEF 338
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 300
VE++ A A RVVG+PF +QGPQ+D QF+K+L YI+SG + GAKL GG +G
Sbjct: 339 VERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKVLGYIKSGKEEGAKLLCGGGAAADRG 398
Query: 301 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 360
Y+I+PTVF V+D M IAK+EIFGPV ILK+K ++EV+ R+N S+YGLAA VFT +LD
Sbjct: 399 YFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKSMEEVVGRANNSKYGLAAAVFTKDLDK 458
Query: 361 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 413
AN L +AL+ G+VW+NC+DVF A PFGGYK SG GRE G Y L Y +VK V
Sbjct: 459 ANYLSQALQAGTVWVNCYDVFGAQSPFGGYKLSGSGRELGEYGLQAYTEVKTV 511
|
|
| UNIPROTKB|Q2XQV4 ALDH2 "Aldehyde dehydrogenase, mitochondrial" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 1339 (476.4 bits), Expect = 9.5e-137, P = 9.5e-137
Identities = 255/413 (61%), Positives = 309/413 (74%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
+ A +R +++ R ADL+ER +AALET DNGKP+ S ++ M + RYYAGWADK
Sbjct: 100 LDASDRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADK 159
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
G T P DG Y T HEP+GV GQIIPWNFPLLM AWK+GPALA GN +V+K +EQTP
Sbjct: 160 YHGKTLPIDGDYFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVSEQTP 219
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
L+ALYV+ L+ EAG PPGV+NIV GYGPTAGAA+ASH +VDK+AFTGST G ++ A
Sbjct: 220 LTALYVANLIKEAGFPPGVVNIVPGYGPTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAG 279
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
KSNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQCCCAGSRTFV E +Y +F
Sbjct: 280 KSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYAEF 339
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 300
VE++ A A RVVG+PF +QGPQID QF+KIL YI+SG + GAKL GG +G
Sbjct: 340 VERSVARARSRVVGNPFDSRTEQGPQIDETQFKKILGYIKSGKEEGAKLLCGGGAAADRG 399
Query: 301 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 360
Y+I+PTVF V+D M IAK+EIFGPV ILK+K ++EVI R+N S+YGLAA VFT +LD
Sbjct: 400 YFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVIGRANNSKYGLAAAVFTKDLDK 459
Query: 361 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 413
AN L +AL+ G+VW+NC+DVF A PFGGYK SG GRE G Y L Y +VK V
Sbjct: 460 ANYLSQALQAGTVWVNCYDVFGAQSPFGGYKLSGSGRELGEYGLQAYTEVKTV 512
|
|
| UNIPROTKB|F1PBJ8 ALDH2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1334 (474.7 bits), Expect = 3.2e-136, P = 3.2e-136
Identities = 256/413 (61%), Positives = 308/413 (74%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
M A +R +++ R ADL+ER +AALET DNGKP+ S ++ M R RYYAGWADK
Sbjct: 100 MDASDRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLRCLRYYAGWADK 159
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
G T P DG + T HEP+GV GQIIPWNFPLLM AWK+GPALA GN IV+K AEQTP
Sbjct: 160 YHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVIVMKVAEQTP 219
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
L+ALYV+ L+ EAG PPGV+NI+ G+GPTAGAA+ASH +VDK+AFTGST G +V A
Sbjct: 220 LTALYVANLIKEAGFPPGVVNIIPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLVQVAAG 279
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
SNLK VTLELGGKSP I+ DAD++ A E AH+ALFFNQGQCCCAGSRTFV E VY +F
Sbjct: 280 NSNLKRVTLELGGKSPNIIMSDADMNWAVEQAHFALFFNQGQCCCAGSRTFVQEDVYAEF 339
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 300
VE++ A A RVVG+PF +QGPQ+D QF+KIL YI+SG + GAKL GG +G
Sbjct: 340 VERSVARAKSRVVGNPFDSQTEQGPQVDETQFKKILGYIKSGKEEGAKLLCGGGAAADRG 399
Query: 301 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 360
Y+I+PTVF V+D M IAK+EIFGPV ILK+K ++EVI R+N S+YGLAA VFT +LD
Sbjct: 400 YFIQPTVFGDVQDTMTIAKEEIFGPVMQILKFKTIEEVIGRANNSKYGLAAAVFTKDLDK 459
Query: 361 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 413
AN L +AL+ G+VWINC+DVF A PFGGYK SG GRE G Y L Y +VK V
Sbjct: 460 ANYLSQALQAGTVWINCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTV 512
|
|
| UNIPROTKB|P05091 ALDH2 "Aldehyde dehydrogenase, mitochondrial" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 1330 (473.2 bits), Expect = 8.5e-136, P = 8.5e-136
Identities = 252/413 (61%), Positives = 306/413 (74%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
M A R +++ R ADL+ER +AALET DNGKP+ S ++ M + RYYAGWADK
Sbjct: 96 MDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADK 155
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
G T P DG + T HEP+GV GQIIPWNFPLLM AWK+GPALA GN +V+K AEQTP
Sbjct: 156 YHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTP 215
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
L+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH +VDK+AFTGST G+++ A
Sbjct: 216 LTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAG 275
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
SNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQCCCAGSRTFV E +YD+F
Sbjct: 276 SSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEF 335
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 300
VE++ A A RVVG+PF +QGPQ+D QF+KIL YI +G GAKL GG +G
Sbjct: 336 VERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRG 395
Query: 301 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 360
Y+I+PTVF V+D M IAK+EIFGPV ILK+K ++EV+ R+N S YGLAA VFT +LD
Sbjct: 396 YFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDK 455
Query: 361 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 413
AN L +AL+ G+VW+NC+DVF A PFGGYK SG GRE G Y L Y +VK V
Sbjct: 456 ANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTV 508
|
|
| UNIPROTKB|E1BT93 ALDH2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 1328 (472.5 bits), Expect = 1.4e-135, P = 1.4e-135
Identities = 245/413 (59%), Positives = 313/413 (75%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
M A R K++ R ADL+ER +AALET DNGKP+ S ++ M + RY+AGW+DK
Sbjct: 98 MDASHRGKLLNRLADLIERDRAYLAALETLDNGKPYSISYLVDLDMVVKCLRYFAGWSDK 157
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
G T P DG + T HEP+GV GQIIPWNFPLLM AWK+GPALA GN +V+K AEQTP
Sbjct: 158 FHGKTIPLDGDFFCYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTP 217
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
LSALYV+ L+ EAG PPGV+NI+ GYGPTAGAA+++HM+VDK+AFTGST G ++ + AA
Sbjct: 218 LSALYVANLIKEAGFPPGVVNIIPGYGPTAGAAISAHMDVDKVAFTGSTEVGHLIKKAAA 277
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
+SNLK VTLELGGKSP I+ DAD+D A + AH+ALFFNQGQCCCAGSRT+V E +Y++F
Sbjct: 278 ESNLKRVTLELGGKSPNIIMSDADMDWAVDQAHFALFFNQGQCCCAGSRTYVQEDIYNEF 337
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 300
VE++ A RVVG+PF +QGPQ+D EQF+KIL YI +G GAKL GG +G
Sbjct: 338 VERSVEKAKSRVVGNPFDFKTEQGPQVDEEQFKKILGYISTGKREGAKLLCGGNPAADRG 397
Query: 301 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 360
Y+++PTVF V+D+M IA++EIFGPV I+K+K ++E+I+R+N S+YGLAA VFT ++D
Sbjct: 398 YFVQPTVFGDVQDNMTIAREEIFGPVMQIMKFKTIEEIIERANNSKYGLAAAVFTKDIDK 457
Query: 361 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 413
AN + +ALR G+VW+NC++VF A PFGGYK SG GRE G Y L YL+VK V
Sbjct: 458 ANYVSQALRAGTVWVNCYNVFGAQAPFGGYKASGNGRELGEYGLEAYLEVKNV 510
|
|
| ZFIN|ZDB-GENE-030326-5 aldh2.2 "aldehyde dehydrogenase 2.2" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 1325 (471.5 bits), Expect = 2.9e-135, P = 2.9e-135
Identities = 247/413 (59%), Positives = 307/413 (74%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
M A +R ++ R AD +ER +A LET DNGKP+ S +VPM + RYYAGWADK
Sbjct: 95 MDASQRGLLLSRLADCIERDAAYLAELETLDNGKPYAVSFSVDVPMVVKCMRYYAGWADK 154
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
+G T P DG Y T HEPIGV GQIIPWNFPLLM AWK+GPALA GNT+V+K AEQTP
Sbjct: 155 WEGKTIPIDGNYFCYTRHEPIGVCGQIIPWNFPLLMQAWKLGPALATGNTVVMKVAEQTP 214
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
L+ALY++ L+ E G P GV+NIV G GPTAGAA+ASHM+VDK+AFTGST G ++ + ++
Sbjct: 215 LTALYIASLIKEVGFPAGVVNIVPGMGPTAGAAIASHMDVDKVAFTGSTDVGHLIQRASS 274
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
SNLK VTLELGGKSP I+ DA++++A E +H ALFFNQGQCCCAG+RTFV ES+YD+F
Sbjct: 275 ASNLKKVTLELGGKSPNIILSDANMEEAVEQSHIALFFNQGQCCCAGTRTFVQESIYDEF 334
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 300
VE++ A R+VGDPF +QGPQ++ +QF+K+L YI SG GAKL GG +G
Sbjct: 335 VERSVERAKNRIVGDPFDLNTEQGPQVNEDQFKKVLGYISSGKREGAKLMCGGAPAAERG 394
Query: 301 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 360
Y+I+PTVF VKDDM IA++EIFGPV ILK+K L+EVI+R+N S+YGLA VFT ++D
Sbjct: 395 YFIQPTVFGDVKDDMTIAREEIFGPVMQILKFKSLEEVIERANDSKYGLAGAVFTQDIDK 454
Query: 361 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 413
AN + LR G+VWINC++VF PFGGYK SG GRE G Y L NY +VK V
Sbjct: 455 ANYISHGLRAGTVWINCYNVFGVQAPFGGYKASGIGREMGEYGLENYTEVKTV 507
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| P42041 | ALDH_ALTAL | 1, ., 2, ., 1, ., 3 | 0.5226 | 0.9763 | 0.8309 | N/A | no |
| Q25417 | ALDH2_LEITA | 1, ., 2, ., 1, ., 3 | 0.5245 | 0.9645 | 0.8192 | N/A | no |
| P41751 | ALDH_ASPNG | 1, ., 2, ., 1, ., 3 | 0.5230 | 0.9739 | 0.8289 | yes | no |
| P40108 | ALDH_DAVTA | 1, ., 2, ., 1, ., 3 | 0.5504 | 0.9810 | 0.8366 | N/A | no |
| O34660 | ALDH4_BACSU | 1, ., 2, ., 1, ., 3 | 0.5298 | 0.9881 | 0.8444 | yes | no |
| P47738 | ALDH2_MOUSE | 1, ., 2, ., 1, ., 3 | 0.6139 | 0.9858 | 0.8034 | yes | no |
| P11884 | ALDH2_RAT | 1, ., 2, ., 1, ., 3 | 0.6139 | 0.9858 | 0.8034 | yes | no |
| Q27640 | ALDH_ENCBU | 1, ., 2, ., 1, ., 3 | 0.5498 | 0.9716 | 0.8269 | N/A | no |
| Q8S528 | AL2B7_ARATH | 1, ., 2, ., 1, ., 3 | 0.8203 | 1.0 | 0.7921 | yes | no |
| P32872 | ALDHY_YEASX | 1, ., 2, ., 1, ., 3 | 0.5465 | 0.9408 | 0.7788 | yes | no |
| Q29490 | ALDH1_MACPR | 1, ., 2, ., 1, ., 3 | 0.5491 | 0.9858 | 0.8323 | N/A | no |
| Q28399 | ALDH1_ELEED | 1, ., 2, ., 1, ., 3 | 0.5491 | 0.9858 | 0.8323 | N/A | no |
| P81178 | ALDH2_MESAU | 1, ., 2, ., 1, ., 3 | 0.6198 | 0.9763 | 0.826 | N/A | no |
| P51977 | AL1A1_SHEEP | 1, ., 2, ., 1, ., 3, 6 | 0.5707 | 0.9858 | 0.8323 | N/A | no |
| Q5RF00 | ALDH2_PONAB | 1, ., 2, ., 1, ., 3 | 0.6019 | 0.9858 | 0.8065 | yes | no |
| P08157 | ALDH_EMENI | 1, ., 2, ., 1, ., 3 | 0.5617 | 0.9739 | 0.8289 | yes | no |
| O14293 | YF19_SCHPO | 1, ., 2, ., 1, ., - | 0.5302 | 0.9739 | 0.8190 | yes | no |
| Q8HYE4 | AL1A1_MACFA | 1, ., 2, ., 1, ., 3, 6 | 0.5635 | 0.9858 | 0.8323 | N/A | no |
| P86886 | AL1A1_MESAU | 1, ., 2, ., 1, ., 3, 6 | 0.5731 | 0.9858 | 0.834 | N/A | no |
| O74187 | ALDH_AGABI | 1, ., 2, ., 1, ., 3 | 0.5134 | 0.9669 | 0.818 | N/A | no |
| P20000 | ALDH2_BOVIN | 1, ., 2, ., 1, ., 3 | 0.6101 | 0.9763 | 0.7942 | yes | no |
| P05091 | ALDH2_HUMAN | 1, ., 2, ., 1, ., 3 | 0.6043 | 0.9858 | 0.8065 | yes | no |
| Q2XQV4 | ALDH2_PIG | 1, ., 2, ., 1, ., 3 | 0.6115 | 0.9858 | 0.8003 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| GSVIVG00028844001 | SubName- Full=Chromosome chr1 scaffold_46, whole genome shotgun sequence; (538 aa) | ||||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| GSVIVG00038001001 | SubName- Full=Chromosome chr14 scaffold_9, whole genome shotgun sequence; (622 aa) | • | • | • | • | 0.951 | |||||
| PDC1 | SubName- Full=Chromosome chr8 scaffold_115, whole genome shotgun sequence; (605 aa) | • | • | 0.911 | |||||||
| GSVIVG00024065001 | SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (607 aa) | • | • | 0.910 | |||||||
| GSVIVG00005787001 | SubName- Full=Chromosome chr3 scaffold_158, whole genome shotgun sequence; (360 aa) | • | • | • | 0.902 | ||||||
| GSVIVG00001276001 | SubName- Full=Chromosome undetermined scaffold_114, whole genome shotgun sequence; (290 aa) | • | 0.901 | ||||||||
| GSVIVG00035907001 | SubName- Full=Chromosome chr10 scaffold_81, whole genome shotgun sequence; (215 aa) | • | 0.899 | ||||||||
| ADH2 | SubName- Full=Putative uncharacterized protein (Chromosome chr4 scaffold_73, whole genome shotg [...] (380 aa) | • | 0.899 | ||||||||
| GSVIVG00034833001 | SubName- Full=Chromosome chr4 scaffold_73, whole genome shotgun sequence; (380 aa) | • | 0.899 | ||||||||
| GSVIVG00034832001 | SubName- Full=Chromosome chr4 scaffold_73, whole genome shotgun sequence; (380 aa) | • | 0.899 | ||||||||
| GSVIVG00034830001 | SubName- Full=Chromosome chr4 scaffold_73, whole genome shotgun sequence; (380 aa) | • | 0.899 | ||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 423 | |||
| PLN02466 | 538 | PLN02466, PLN02466, aldehyde dehydrogenase family | 0.0 | |
| cd07142 | 476 | cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogen | 0.0 | |
| cd07091 | 476 | cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH | 0.0 | |
| cd07141 | 481 | cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retin | 0.0 | |
| pfam00171 | 459 | pfam00171, Aldedh, Aldehyde dehydrogenase family | 0.0 | |
| PLN02766 | 501 | PLN02766, PLN02766, coniferyl-aldehyde dehydrogena | 0.0 | |
| cd07078 | 432 | cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrog | 0.0 | |
| cd07143 | 481 | cd07143, ALDH_AldA_AN0554, Aspergillus nidulans al | 0.0 | |
| cd07144 | 484 | cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisi | 0.0 | |
| cd07112 | 462 | cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+ | 0.0 | |
| COG1012 | 472 | COG1012, PutA, NAD-dependent aldehyde dehydrogenas | 0.0 | |
| cd07115 | 453 | cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens | 0.0 | |
| cd07114 | 457 | cd07114, ALDH_DhaS, Uncharacterized Candidatus pel | 0.0 | |
| cd07093 | 455 | cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogen | 1e-172 | |
| cd07119 | 482 | cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-de | 1e-170 | |
| cd07103 | 451 | cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succina | 1e-169 | |
| cd07559 | 480 | cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophu | 1e-162 | |
| cd07109 | 454 | cd07109, ALDH_AAS00426, Uncharacterized Saccharopo | 1e-162 | |
| PRK13252 | 488 | PRK13252, PRK13252, betaine aldehyde dehydrogenase | 1e-159 | |
| cd06534 | 367 | cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd | 1e-158 | |
| cd07090 | 457 | cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethy | 1e-158 | |
| cd07138 | 466 | cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-ox | 1e-154 | |
| cd07140 | 486 | cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate | 1e-151 | |
| cd07118 | 454 | cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbos | 1e-150 | |
| cd07117 | 475 | cd07117, ALDH_StaphAldA1, Uncharacterized Staphylo | 1e-150 | |
| cd07110 | 456 | cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehy | 1e-149 | |
| TIGR01804 | 467 | TIGR01804, BADH, glycine betaine aldehyde dehydrog | 1e-148 | |
| cd07092 | 450 | cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-d | 1e-147 | |
| cd07089 | 459 | cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6- | 1e-146 | |
| cd07088 | 468 | cd07088, ALDH_LactADH-AldA, Escherichia coli lacta | 1e-144 | |
| cd07097 | 473 | cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+ | 1e-141 | |
| cd07106 | 446 | cd07106, ALDH_AldA-AAD23400, Streptomyces aureofac | 1e-141 | |
| PRK13473 | 475 | PRK13473, PRK13473, gamma-aminobutyraldehyde dehyd | 1e-140 | |
| cd07139 | 471 | cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculo | 1e-140 | |
| cd07116 | 479 | cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD | 1e-137 | |
| cd07111 | 480 | cd07111, ALDH_F16, Aldehyde dehydrogenase family 1 | 1e-137 | |
| PLN02467 | 503 | PLN02467, PLN02467, betaine aldehyde dehydrogenase | 1e-136 | |
| cd07104 | 431 | cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P) | 1e-134 | |
| cd07108 | 457 | cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-d | 1e-131 | |
| cd07149 | 453 | cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) wi | 1e-130 | |
| cd07107 | 456 | cd07107, ALDH_PhdK-like, Nocardioides 2-carboxyben | 1e-128 | |
| cd07113 | 477 | cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dep | 1e-127 | |
| PRK09847 | 494 | PRK09847, PRK09847, gamma-glutamyl-gamma-aminobuty | 1e-126 | |
| TIGR02299 | 488 | TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate | 1e-126 | |
| TIGR01780 | 448 | TIGR01780, SSADH, succinate-semialdehyde dehydroge | 1e-123 | |
| cd07150 | 451 | cd07150, ALDH_VaniDH_like, Pseudomonas putida vani | 1e-122 | |
| PLN02278 | 498 | PLN02278, PLN02278, succinic semialdehyde dehydrog | 1e-122 | |
| cd07145 | 456 | cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcu | 1e-120 | |
| cd07124 | 512 | cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline- | 1e-120 | |
| cd07131 | 478 | cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candi | 1e-119 | |
| cd07100 | 429 | cd07100, ALDH_SSADH1_GabD1, Mycobacterium tubercul | 1e-118 | |
| cd07099 | 453 | cd07099, ALDH_DDALDH, Methylomonas sp | 1e-117 | |
| TIGR03216 | 481 | TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semia | 1e-114 | |
| cd07105 | 432 | cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogena | 1e-112 | |
| cd07146 | 451 | cd07146, ALDH_PhpJ, Streptomyces putative phosphon | 1e-110 | |
| cd07086 | 478 | cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha | 1e-109 | |
| cd07120 | 455 | cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida al | 1e-109 | |
| cd07094 | 453 | cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NA | 1e-109 | |
| cd07151 | 465 | cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxyb | 1e-108 | |
| PRK10090 | 409 | PRK10090, PRK10090, aldehyde dehydrogenase A; Prov | 1e-108 | |
| PRK09407 | 524 | PRK09407, gabD2, succinic semialdehyde dehydrogena | 1e-107 | |
| cd07152 | 443 | cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde | 1e-107 | |
| cd07102 | 452 | cd07102, ALDH_EDX86601, Uncharacterized aldehyde d | 1e-104 | |
| cd07101 | 454 | cd07101, ALDH_SSADH2_GabD2, Mycobacterium tubercul | 1e-103 | |
| cd07082 | 473 | cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-ph | 1e-103 | |
| PRK03137 | 514 | PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehy | 1e-103 | |
| PRK11241 | 482 | PRK11241, gabD, succinate-semialdehyde dehydrogena | 1e-102 | |
| TIGR03374 | 472 | TIGR03374, ABALDH, 1-pyrroline dehydrogenase | 4e-99 | |
| cd07147 | 452 | cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase f | 4e-97 | |
| TIGR04284 | 480 | TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, | 2e-89 | |
| cd07098 | 465 | cd07098, ALDH_F15-22, Aldehyde dehydrogenase famil | 7e-88 | |
| TIGR01237 | 511 | TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carb | 2e-87 | |
| cd07085 | 478 | cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyd | 6e-86 | |
| PRK09406 | 457 | PRK09406, gabD1, succinic semialdehyde dehydrogena | 6e-83 | |
| TIGR03250 | 472 | TIGR03250, PhnAcAld_DH, putative phosphonoacetalde | 9e-81 | |
| cd07083 | 500 | cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent | 3e-77 | |
| cd07087 | 426 | cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: | 2e-76 | |
| cd07130 | 474 | cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-amin | 2e-75 | |
| cd07095 | 431 | cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-sem | 1e-74 | |
| cd07134 | 433 | cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehy | 2e-74 | |
| cd07125 | 518 | cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-car | 8e-70 | |
| cd07148 | 455 | cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL031 | 3e-67 | |
| cd07133 | 434 | cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehyd | 1e-66 | |
| cd07135 | 436 | cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisia | 4e-66 | |
| cd07136 | 449 | cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldeh | 1e-65 | |
| TIGR01238 | 500 | TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carb | 4e-64 | |
| COG4230 | 769 | COG4230, COG4230, Delta 1-pyrroline-5-carboxylate | 2e-59 | |
| PRK13968 | 462 | PRK13968, PRK13968, putative succinate semialdehyd | 3e-58 | |
| PRK11904 | 1038 | PRK11904, PRK11904, bifunctional proline dehydroge | 6e-58 | |
| TIGR01722 | 477 | TIGR01722, MMSDH, methylmalonic acid semialdehyde | 6e-58 | |
| PTZ00381 | 493 | PTZ00381, PTZ00381, aldehyde dehydrogenase family | 3e-57 | |
| PRK11905 | 1208 | PRK11905, PRK11905, bifunctional proline dehydroge | 1e-54 | |
| PRK09457 | 487 | PRK09457, astD, succinylglutamic semialdehyde dehy | 1e-53 | |
| PLN00412 | 496 | PLN00412, PLN00412, NADP-dependent glyceraldehyde- | 7e-53 | |
| cd07132 | 443 | cd07132, ALDH_F3AB, Aldehyde dehydrogenase family | 4e-52 | |
| PLN02315 | 508 | PLN02315, PLN02315, aldehyde dehydrogenase family | 1e-51 | |
| TIGR03240 | 484 | TIGR03240, arg_catab_astD, succinylglutamic semial | 2e-51 | |
| PLN02419 | 604 | PLN02419, PLN02419, methylmalonate-semialdehyde de | 5e-48 | |
| cd07137 | 432 | cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase | 1e-46 | |
| cd07123 | 522 | cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-ca | 1e-46 | |
| TIGR01236 | 532 | TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carb | 2e-45 | |
| PRK11809 | 1318 | PRK11809, putA, trifunctional transcriptional regu | 5e-43 | |
| PLN02174 | 484 | PLN02174, PLN02174, aldehyde dehydrogenase family | 9e-36 | |
| cd07084 | 442 | cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+ | 1e-30 | |
| PLN02203 | 484 | PLN02203, PLN02203, aldehyde dehydrogenase | 1e-30 | |
| cd07128 | 513 | cd07128, ALDH_MaoC-N, N-terminal domain of the mon | 1e-25 | |
| PRK11903 | 521 | PRK11903, PRK11903, aldehyde dehydrogenase; Provis | 1e-22 | |
| TIGR02278 | 663 | TIGR02278, PaaN-DH, phenylacetic acid degradation | 1e-20 | |
| PRK11563 | 675 | PRK11563, PRK11563, bifunctional aldehyde dehydrog | 5e-19 | |
| cd07126 | 489 | cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carb | 4e-16 | |
| cd07129 | 454 | cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdeh | 4e-15 | |
| cd07077 | 397 | cd07077, ALDH-like, NAD(P)+-dependent aldehyde deh | 6e-14 | |
| cd07081 | 439 | cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acyla | 6e-06 | |
| cd07122 | 436 | cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldeh | 1e-04 | |
| TIGR02288 | 551 | TIGR02288, PaaN_2, phenylacetic acid degradation p | 8e-04 | |
| cd07121 | 429 | cd07121, ALDH_EutE, Ethanolamine utilization prote | 0.004 |
| >gnl|CDD|215259 PLN02466, PLN02466, aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Score = 899 bits (2326), Expect = 0.0
Identities = 364/423 (86%), Positives = 399/423 (94%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
MTAYERS+I+LRFADLLE+HNDE+AALETWDNGKP+EQSA+ E+PM RLFRYYAGWADK
Sbjct: 116 MTAYERSRILLRFADLLEKHNDELAALETWDNGKPYEQSAKAELPMFARLFRYYAGWADK 175
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
I GLT PADGP+HVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP
Sbjct: 176 IHGLTVPADGPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 235
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
LSALY +KLLHEAGLPPGVLN+VSG+GPTAGAALASHM+VDKLAFTGST TGKIVL+LAA
Sbjct: 236 LSALYAAKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLELAA 295
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
KSNLKPVTLELGGKSPFIVCEDADVDKA ELAH+ALFFNQGQCCCAGSRTFVHE VYD+F
Sbjct: 296 KSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDEF 355
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 300
VEKA A A+KRVVGDPFK G++QGPQIDSEQFEKIL+YI+SGV+ GA LE GG+R G+KG
Sbjct: 356 VEKAKARALKRVVGDPFKKGVEQGPQIDSEQFEKILRYIKSGVESGATLECGGDRFGSKG 415
Query: 301 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 360
YYI+PTVF+ V+DDMLIA+DEIFGPVQSILK+KDLDEVI+R+N ++YGLAAGVFT NLDT
Sbjct: 416 YYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDLDEVIRRANNTRYGLAAGVFTQNLDT 475
Query: 361 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKNP 420
ANTL RALRVG+VW+NCFDVFDAAIPFGGYK SG GREKG YSL+NYLQVKAVVT LKNP
Sbjct: 476 ANTLSRALRVGTVWVNCFDVFDAAIPFGGYKMSGIGREKGIYSLNNYLQVKAVVTPLKNP 535
Query: 421 AWL 423
AWL
Sbjct: 536 AWL 538
|
Length = 538 |
| >gnl|CDD|143460 cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Score = 809 bits (2090), Expect = 0.0
Identities = 326/415 (78%), Positives = 373/415 (89%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
MT YERS+I+LRFADLLE+H DE+AALETWDNGKP+EQ+ EVP+ RLFRYYAGWADK
Sbjct: 62 MTGYERSRILLRFADLLEKHADELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWADK 121
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
I G+T PADGP+HV TLHEPIGV GQIIPWNFPLLMFAWKVGPALACGNTIVLK AEQTP
Sbjct: 122 IHGMTLPADGPHHVYTLHEPIGVVGQIIPWNFPLLMFAWKVGPALACGNTIVLKPAEQTP 181
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
LSAL +KL EAGLP GVLNIV+G+GPTAGAA+ASHM+VDK+AFTGST GKI++QLAA
Sbjct: 182 LSALLAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQLAA 241
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
KSNLKPVTLELGGKSPFIVCEDADVDKA ELAH+ALFFNQGQCCCAGSRTFVHES+YD+F
Sbjct: 242 KSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDEF 301
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 300
VEKA A A+KRVVGDPF+ G++QGPQ+D EQFEKIL YI G + GA L TGG+R+G+KG
Sbjct: 302 VEKAKARALKRVVGDPFRKGVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGSKG 361
Query: 301 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 360
YYI+PT+F+ VKDDM IA+DEIFGPVQSILK+K +DEVI+R+N S+YGLAAGVF+ N+DT
Sbjct: 362 YYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVDEVIKRANNSKYGLAAGVFSKNIDT 421
Query: 361 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 415
ANTL RAL+ G+VW+NC+DVFDA+IPFGGYK SG GREKG Y+L+NYLQVKAVV
Sbjct: 422 ANTLSRALKAGTVWVNCYDVFDASIPFGGYKMSGIGREKGIYALNNYLQVKAVVM 476
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Length = 476 |
| >gnl|CDD|143410 cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Score = 737 bits (1906), Expect = 0.0
Identities = 268/414 (64%), Positives = 327/414 (78%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
M ER +++ + ADL+ER DE+AALE+ DNGKP E+SA+ +V ++ + RYYAGWADK
Sbjct: 62 MDPRERGRLLNKLADLIERDRDELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADK 121
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
IQG T P DG + T EPIGV GQIIPWNFPLLM AWK+ PALA GNT+VLK AEQTP
Sbjct: 122 IQGKTIPIDGNFLAYTRREPIGVCGQIIPWNFPLLMLAWKLAPALAAGNTVVLKPAEQTP 181
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
LSALY+++L+ EAG PPGV+NIV G+GPTAGAA++SHM+VDK+AFTGST G+ +++ AA
Sbjct: 182 LSALYLAELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIMEAAA 241
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
KSNLK VTLELGGKSP IV +DAD+DKA E A + +FFNQGQCCCAGSR FV ES+YD+F
Sbjct: 242 KSNLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDEF 301
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 300
VEK A A KRVVGDPF QGPQ+ QF+KIL YI SG GA L TGGER G+KG
Sbjct: 302 VEKFKARAEKRVVGDPFDPDTFQGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGSKG 361
Query: 301 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 360
Y+I+PTVFT VKDDM IAK+EIFGPV +ILK+K DEVI+R+N ++YGLAAGVFT +++
Sbjct: 362 YFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTEDEVIERANDTEYGLAAGVFTKDINK 421
Query: 361 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 414
A + RAL+ G+VW+N ++VFDAA+PFGG+KQSG GRE G L Y QVKAV
Sbjct: 422 ALRVSRALKAGTVWVNTYNVFDAAVPFGGFKQSGFGRELGEEGLEEYTQVKAVT 475
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. Also included in this subfamily is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial, homotetramers that oxidize acetaldehyde and glycolaldehyde, as well as, the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Also included is the AldA aldehyde dehydrogenase of Aspergillus nidulans (locus AN0554), the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) of Saccharomyces cerevisiae, and other similar sequences. Length = 476 |
| >gnl|CDD|143459 cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Score = 691 bits (1785), Expect = 0.0
Identities = 259/414 (62%), Positives = 315/414 (76%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
M A ER +++ + ADL+ER +A+LET DNGKPF +S ++P ++ RYYAGWADK
Sbjct: 66 MDASERGRLLNKLADLIERDRAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAGWADK 125
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
I G T P DG + T HEP+GV GQIIPWNFPLLM AWK+ PALACGNT+VLK AEQTP
Sbjct: 126 IHGKTIPMDGDFFTYTRHEPVGVCGQIIPWNFPLLMAAWKLAPALACGNTVVLKPAEQTP 185
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
L+ALY++ L+ EAG PPGV+N+V GYGPTAGAA++SH ++DK+AFTGST GK++ Q A
Sbjct: 186 LTALYLASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQQAAG 245
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
KSNLK VTLELGGKSP IV DAD+D A E AH ALFFN GQCCCAGSRTFV ES+YD+F
Sbjct: 246 KSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESIYDEF 305
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 300
V+++ A KRVVG+PF +QGPQID EQF+KIL+ I SG GAKLE GG+R G KG
Sbjct: 306 VKRSVERAKKRVVGNPFDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRHGDKG 365
Query: 301 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 360
Y+I+PTVF+ V DDM IAK+EIFGPVQ I K+K +DEVI+R+N + YGLAA VFT ++D
Sbjct: 366 YFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTIDEVIERANNTTYGLAAAVFTKDIDK 425
Query: 361 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 414
A T ALR G+VW+NC++V PFGGYK SG GRE G Y L Y +VK V
Sbjct: 426 AITFSNALRAGTVWVNCYNVVSPQAPFGGYKMSGNGRELGEYGLQEYTEVKTVT 479
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. Length = 481 |
| >gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 597 bits (1542), Expect = 0.0
Identities = 215/414 (51%), Positives = 273/414 (65%), Gaps = 3/414 (0%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
ER+ I+L+ ADLLE DE+A LET + GKP + A+ EVP RYYAG A K
Sbjct: 48 TPPSERAAILLKAADLLEERRDELAELETLETGKPLAE-ARGEVPRAIDTLRYYAGLARK 106
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
++G T P+D T EP+GV G I PWNFPLL+ AWK+ PALA GNT+VLK +E TP
Sbjct: 107 LEGETLPSDPGVLAYTRREPLGVVGAITPWNFPLLLAAWKIAPALAAGNTVVLKPSELTP 166
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
L+AL +++L EAGLPPGVLN+V+G G G AL H +VDK++FTGST G+ + + AA
Sbjct: 167 LTALLLAELFEEAGLPPGVLNVVTGSGSEVGDALVEHPDVDKVSFTGSTEVGRRIAKAAA 226
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
K NLK VTLELGGK+P IV +DAD+D A E A + F N GQ C AGSR VHES+YD+F
Sbjct: 227 K-NLKRVTLELGGKNPLIVFDDADLDAAVEGAVFGAFGNAGQVCTAGSRLLVHESIYDEF 285
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 300
VE+ A VGDP GP I +Q E++L YI + GAKL GGE KG
Sbjct: 286 VERLVEAAKSLKVGDPLDPDTDIGPLISKKQRERVLSYIEDAKEEGAKLLCGGEAGLEKG 345
Query: 301 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 360
Y+++PTV V DM IA++EIFGPV S++ +KD DE I+ +N ++YGLAAGVFT++L+
Sbjct: 346 YFVEPTVLADVTPDMRIAQEEIFGPVLSVIPFKDEDEAIELANDTEYGLAAGVFTNDLER 405
Query: 361 ANTLMRALRVGSVWINCFDVFDA-AIPFGGYKQSGQGREKGSYSLSNYLQVKAV 413
A + R L G VWIN + D A+PFGG+KQSG GRE G L Y + K V
Sbjct: 406 ALRVARRLEAGMVWINDYTTGDPEALPFGGFKQSGFGREGGKEGLEEYTETKTV 459
|
This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity. Length = 459 |
| >gnl|CDD|215410 PLN02766, PLN02766, coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 578 bits (1492), Expect = 0.0
Identities = 234/423 (55%), Positives = 306/423 (72%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
M+ +ER +I+++FADL+E H +E+AAL+T D GK F ++P L RYYAG ADK
Sbjct: 79 MSGFERGRIMMKFADLIEEHIEELAALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAADK 138
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
I G T TL EPIGV G IIPWNFP MF KV PALA G T+V+K AEQTP
Sbjct: 139 IHGETLKMSRQLQGYTLKEPIGVVGHIIPWNFPSTMFFMKVAPALAAGCTMVVKPAEQTP 198
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
LSAL+ + L AG+P GV+N+V+G+GPTAGAA+ASHM+VDK++FTGST G+ ++Q AA
Sbjct: 199 LSALFYAHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQAAA 258
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
SNLK V+LELGGKSP ++ +DADVD A +LA +F+N+G+ C A SR +V E +YD+F
Sbjct: 259 TSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYDEF 318
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 300
V+K A VVGDPF +QGPQ+D +QFEKIL YI G GA L TGG+ G KG
Sbjct: 319 VKKLVEKAKDWVVGDPFDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGDKG 378
Query: 301 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 360
YYI+PT+FT V +DM IA+DEIFGPV S++K+K ++E I+++N ++YGLAAG+ T +LD
Sbjct: 379 YYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTVEEAIKKANNTKYGLAAGIVTKDLDV 438
Query: 361 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKNP 420
ANT+ R++R G++W+NC+ FD PFGGYK SG GR++G +L YLQVK+VVT L N
Sbjct: 439 ANTVSRSIRAGTIWVNCYFAFDPDCPFGGYKMSGFGRDQGMDALDKYLQVKSVVTPLYNS 498
Query: 421 AWL 423
WL
Sbjct: 499 PWL 501
|
Length = 501 |
| >gnl|CDD|143397 cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 564 bits (1457), Expect = 0.0
Identities = 211/418 (50%), Positives = 273/418 (65%), Gaps = 5/418 (1%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
+ ER+ I+ + ADLLE +E+AALET + GKP + A EV FRYYAG A +
Sbjct: 17 LPPAERAAILRKLADLLEERREELAALETLETGKP-IEEALGEVARAADTFRYYAGLARR 75
Query: 61 IQGLTAPADGPYHV-QTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 119
+ G P+ P + EP+GV G I PWNFPLL+ AWK+ PALA GNT+VLK +E T
Sbjct: 76 LHGEVIPSPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELT 135
Query: 120 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 179
PL+AL +++LL EAGLPPGVLN+V+G G GAALASH VDK++FTGST GK +++ A
Sbjct: 136 PLTALLLAELLAEAGLPPGVLNVVTGDGDEVGAALASHPRVDKISFTGSTAVGKAIMRAA 195
Query: 180 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239
A+ NLK VTLELGGKSP IV +DAD+D A + A + F N GQ C A SR VHES+YD+
Sbjct: 196 AE-NLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAGQVCTAASRLLVHESIYDE 254
Query: 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL-GA 298
FVE+ VG+P GP I + Q +++L YI GAKL GG+RL G
Sbjct: 255 FVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGAKLLCGGKRLEGG 314
Query: 299 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNL 358
KGY++ PTV T V DM IA++EIFGPV ++ +KD +E I+ +N ++YGLAAGVFT +L
Sbjct: 315 KGYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTEYGLAAGVFTRDL 374
Query: 359 DTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 415
+ A + L G+VWIN + V + + PFGG KQSG GRE G Y L Y + K V
Sbjct: 375 ERALRVAERLEAGTVWINDYSVGAEPSAPFGGVKQSGIGREGGPYGLEEYTEPKTVTI 432
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-like) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. Length = 432 |
| >gnl|CDD|143461 cd07143, ALDH_AldA_AN0554, Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Score = 559 bits (1443), Expect = 0.0
Identities = 229/412 (55%), Positives = 299/412 (72%)
Query: 2 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 61
+ +R + + + ADL+ER+ D +A++E DNGK F + + +V + FRYY GWADKI
Sbjct: 66 SGSKRGRCLSKLADLMERNLDYLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKI 125
Query: 62 QGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 121
G D T HEPIGV GQIIPWNFPLLM AWK+ PALA GNTIVLK +E TPL
Sbjct: 126 HGQVIETDIKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKIAPALAAGNTIVLKPSELTPL 185
Query: 122 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 181
SALY++KL+ EAG PPGV+N+VSGYG T G A++SHM++DK+AFTGST G+ V++ AAK
Sbjct: 186 SALYMTKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAAAK 245
Query: 182 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 241
SNLK VTLELGGKSP IV +DAD++ A Y +FFN GQ CCAGSR +V E +YD+FV
Sbjct: 246 SNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFV 305
Query: 242 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY 301
++ A K VGDPF QGPQ+ Q+E+I+ YI SG GA +ETGG+R G +GY
Sbjct: 306 KRFKEKAKKLKVGDPFAEDTFQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGNEGY 365
Query: 302 YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 361
+I+PT+FT V +DM I K+EIFGPV +++K+K +E I+R+N S YGLAA VFT+N++ A
Sbjct: 366 FIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTEEEAIKRANDSTYGLAAAVFTNNINNA 425
Query: 362 NTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 413
+ AL+ G+VW+NC+++ +PFGGYKQSG GRE G Y+L NY Q+KAV
Sbjct: 426 IRVANALKAGTVWVNCYNLLHHQVPFGGYKQSGIGRELGEYALENYTQIKAV 477
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. Length = 481 |
| >gnl|CDD|143462 cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Score = 543 bits (1402), Expect = 0.0
Identities = 215/416 (51%), Positives = 277/416 (66%), Gaps = 5/416 (1%)
Query: 2 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 61
T ER +++ + ADL+E++ D +AA+E D+GKP+ +A ++ + RYYAGWADKI
Sbjct: 66 TGEERGELLDKLADLVEKNRDLLAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKI 125
Query: 62 QGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 121
QG T P TLHEP GV GQIIPWN+PL M AWK+ PALA GNT+V+K AE TPL
Sbjct: 126 QGKTIPTSPNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKLAPALAAGNTVVIKPAENTPL 185
Query: 122 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 181
S LY + L+ EAG PPGV+NI+ GYG AG+ALA H +VDK+AFTGST TG++V++ AA
Sbjct: 186 SLLYFANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAAA- 244
Query: 182 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 241
NLK VTLE GGKSP +V EDAD+D+A + A + +N GQ C A SR +V ES+YD+FV
Sbjct: 245 QNLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKFV 304
Query: 242 EKANALAMKR-VVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--- 297
EK + VG PF GPQ+ Q++++L YI G GAKL GGE+
Sbjct: 305 EKFVEHVKQNYKVGSPFDDDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPEGL 364
Query: 298 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN 357
KGY+I PT+FT V DM I K+EIFGPV I K+K +E I+++N + YGLAA VFT +
Sbjct: 365 GKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKTYEEAIKKANDTTYGLAAAVFTKD 424
Query: 358 LDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 413
+ A+ + R L G VWIN + D +PFGG+K SG GRE G Y L Y Q KAV
Sbjct: 425 IRRAHRVARELEAGMVWINSSNDSDVGVPFGGFKMSGIGRELGEYGLETYTQTKAV 480
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. Length = 484 |
| >gnl|CDD|143430 cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Score = 535 bits (1381), Expect = 0.0
Identities = 207/414 (50%), Positives = 272/414 (65%), Gaps = 7/414 (1%)
Query: 5 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 64
ER ++LR ADL+E H DE+A LET D GKP + +VP FR+YA DK+ G
Sbjct: 49 ERKAVLLRLADLIEAHRDELALLETLDMGKPISDALAVDVPSAANTFRWYAEAIDKVYGE 108
Query: 65 TAPADGPYHVQTL--HEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 122
AP L EP+GV G ++PWNFPLLM AWK+ PALA GN++VLK AEQ+PL+
Sbjct: 109 VAPT--GPDALALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAEQSPLT 166
Query: 123 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 182
AL +++L EAGLP GVLN+V G+G TAG AL HM+VD LAFTGST G+ L+ + +S
Sbjct: 167 ALRLAELALEAGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQS 226
Query: 183 NLKPVTLELGGKSPFIVCEDA-DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 241
NLK V LE GGKSP IV DA D+D AAE A +F+NQG+ C AGSR VHES+ D+F+
Sbjct: 227 NLKRVWLECGGKSPNIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFL 286
Query: 242 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL--GAK 299
EK A A + GDP + G + F+K+L YI SG GA+L GG+R+
Sbjct: 287 EKVVAAAREWKPGDPLDPATRMGALVSEAHFDKVLGYIESGKAEGARLVAGGKRVLTETG 346
Query: 300 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLD 359
G++++PTVF GV DM IA++EIFGPV S++ + +E + +N S YGLAA V+T +L
Sbjct: 347 GFFVEPTVFDGVTPDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLAASVWTSDLS 406
Query: 360 TANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 413
A+ + R LR G+VW+NCFD D PFGG+KQSG GR+K ++L Y ++K
Sbjct: 407 RAHRVARRLRAGTVWVNCFDEGDITTPFGGFKQSGNGRDKSLHALDKYTELKTT 460
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. Length = 462 |
| >gnl|CDD|223944 COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 518 bits (1335), Expect = 0.0
Identities = 206/415 (49%), Positives = 266/415 (64%), Gaps = 6/415 (1%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
++A ER+ I+ R ADLLE +E+AAL T + GKP + A+ E+ RYYA A +
Sbjct: 55 LSAEERAAILRRIADLLEARAEELAALITLETGKPISE-ARGEIARAADFIRYYAEEARR 113
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
++G T P D EP+GV G I PWNFPL + AWK+ PALA GNT+VLK +EQTP
Sbjct: 114 LEGETIPTDKGSKALVRREPLGVVGAITPWNFPLALAAWKLAPALAAGNTVVLKPSEQTP 173
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
LSAL +++L EAGLP GVLN+V+G G G AL +H +VD ++FTGST G+ + AA
Sbjct: 174 LSALALAELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAA 233
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
NLKPVTLELGGKSP IV EDAD+D A + A + FFN GQ C A SR VHESVYD+F
Sbjct: 234 A-NLKPVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEF 292
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 300
VE+ A A VGDP GP I EQ +++ YI V GA+L GG+R G G
Sbjct: 293 VERLVARAASLKVGDPLDPSTDLGPLISEEQLDRVEGYIEDAVAEGARLLAGGKRPG--G 350
Query: 301 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 360
Y+++PT+ GV DM IA++EIFGPV ++++KD +E I+ +N ++YGLAA +FT +L
Sbjct: 351 YFVEPTILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIELANDTEYGLAAAIFTRDLAR 410
Query: 361 ANTLMRALRVGSVWIN--CFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 413
A + R L G V IN A +PFGG KQSG GRE G Y L + +VK V
Sbjct: 411 AFRVARRLEAGMVGINDYTGGADIAYLPFGGVKQSGLGREGGKYGLEEFTEVKTV 465
|
Length = 472 |
| >gnl|CDD|143433 cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 514 bits (1325), Expect = 0.0
Identities = 212/417 (50%), Positives = 289/417 (69%), Gaps = 1/417 (0%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
M ER +I+ R A+L+ + DE+A LE+ D GKP + + +VP FRYYAGWADK
Sbjct: 38 MDPAERGRILWRLAELILANADELARLESLDTGKPIRAARRLDVPRAADTFRYYAGWADK 97
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
I+G P GP+ T+ EP+GV G I+PWNFPL+ AWKV PALA GNT+VLK AE TP
Sbjct: 98 IEGEVIPVRGPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTP 157
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
LSAL +++L+ EAG P GVLN+V+G+G AGAAL H +VDK+ FTGST G+ ++Q A
Sbjct: 158 LSALRIAELMAEAGFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQ-GA 216
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
NLK V+LELGGKS IV DAD+D A A +F+NQGQ C AGSR VHES+YD+F
Sbjct: 217 AGNLKRVSLELGGKSANIVFADADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEF 276
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 300
+E+ +LA GDP Q GP + QF+++L Y+ G + GA+L TGG+R GA+G
Sbjct: 277 LERFTSLARSLRPGDPLDPKTQMGPLVSQAQFDRVLDYVDVGREEGARLLTGGKRPGARG 336
Query: 301 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 360
++++PT+F V +M IA++EIFGPV S+++++D +E ++ +N ++YGLAAGV+T +L
Sbjct: 337 FFVEPTIFAAVPPEMRIAQEEIFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGR 396
Query: 361 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 417
A+ + AL+ G+VWIN ++ FD PFGGYKQSG GRE G +L Y +VK+V L
Sbjct: 397 AHRVAAALKAGTVWINTYNRFDPGSPFGGYKQSGFGREMGREALDEYTEVKSVWVNL 453
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. Length = 453 |
| >gnl|CDD|143432 cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Score = 514 bits (1325), Expect = 0.0
Identities = 199/420 (47%), Positives = 263/420 (62%), Gaps = 9/420 (2%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPF-EQSAQTEVPMTTRLFRYYAGWAD 59
+T ER K++ R ADL+E + +E+A LET DNGK E AQ V +RYYAG AD
Sbjct: 40 LTPTERGKLLRRLADLIEANAEELAELETRDNGKLIRETRAQ--VRYLAEWYRYYAGLAD 97
Query: 60 KIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 118
KI+G P D G Y T EP+GV I PWN PLL+ A K+ PALA GNT+VLK +E
Sbjct: 98 KIEGAVIPVDKGDYLNFTRREPLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEH 157
Query: 119 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 178
TP S L ++KL EAG PPGV+N+V+G+GP G AL H V K+AFTG T TG+ + +
Sbjct: 158 TPASTLELAKLAEEAGFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARA 217
Query: 179 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 238
AA+ NL PVTLELGGKSP IV +DAD+D A +F GQ C AGSR V S+YD
Sbjct: 218 AAE-NLAPVTLELGGKSPNIVFDDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYD 276
Query: 239 QFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG- 297
+FVE+ A A VGDP Q GP Q EK+ +Y+ + GA++ TGGER
Sbjct: 277 EFVERLVARARAIRVGDPLDPETQMGPLATERQLEKVERYVARAREEGARVLTGGERPSG 336
Query: 298 ---AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVF 354
GY+ +PT+ V +DM IA++E+FGPV S++ + D +E I +N S+YGLAAG++
Sbjct: 337 ADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGIW 396
Query: 355 THNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 414
T +L A+ + RA+ G+VW+N + + PFGG+K SG GRE G ++ Y Q K+V
Sbjct: 397 TRDLARAHRVARAIEAGTVWVNTYRALSPSSPFGGFKDSGIGRENGIEAIREYTQTKSVW 456
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. Length = 457 |
| >gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Score = 490 bits (1264), Expect = e-172
Identities = 191/417 (45%), Positives = 271/417 (64%), Gaps = 5/417 (1%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
M+ ER++I+ + ADL+E DE+A LE+ D GKP + ++P FR++A + +
Sbjct: 38 MSPAERARILHKVADLIEARADELALLESLDTGKPITLARTRDIPRAAANFRFFADYILQ 97
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
+ G + P DG L +P+GVAG I PWN PL++ WK+ PALA GNT+VLK +E TP
Sbjct: 98 LDGESYPQDGGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTP 157
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
L+A +++L +EAGLPPGV+N+V G+GP AGAAL +H +VD ++FTG T TG+ +++ AA
Sbjct: 158 LTAWLLAELANEAGLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAA 217
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
NLKPV+LELGGK+P IV DAD+D+A + A + F N G+ C AGSR V S+YD+F
Sbjct: 218 P-NLKPVSLELGGKNPNIVFADADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEF 276
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--- 297
+E+ A VGDP + GP I E EK+L Y+ GA + TGG R
Sbjct: 277 LERFVERAKALKVGDPLDPDTEVGPLISKEHLEKVLGYVELARAEGATILTGGGRPELPD 336
Query: 298 -AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH 356
GY+++PTV TG+ +D +A++EIFGPV +++ + D +E I+ +N + YGLAA V+T
Sbjct: 337 LEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTR 396
Query: 357 NLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 413
+L A+ + R L G+VW+NC+ V D PFGG K SG GRE G YSL Y ++K V
Sbjct: 397 DLGRAHRVARRLEAGTVWVNCWLVRDLRTPFGGVKASGIGREGGDYSLEFYTELKNV 453
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. Length = 455 |
| >gnl|CDD|143437 cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 486 bits (1252), Expect = e-170
Identities = 182/422 (43%), Positives = 259/422 (61%), Gaps = 6/422 (1%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
+ A ER+ ++ R AD + +E+A LET + GK +S + ++ FRYYAG A K
Sbjct: 56 LPAQERAALLFRIADKIREDAEELARLETLNTGKTLRES-EIDIDDVANCFRYYAGLATK 114
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
G +T+ EP+GV G I PWN+PLL AWK+ PALA GNT+V+K +E TP
Sbjct: 115 ETGEVYDVPPHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPALAAGNTVVIKPSEVTP 174
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
L+ + + +L+ EAGLP GV+N+V+G G T GA LA +VD ++FTG T TG+ +++ AA
Sbjct: 175 LTTIALFELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAA 234
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
N+K V LELGGK+P IV DAD + A + A +FFN GQ C AGSR V ES++D+F
Sbjct: 235 G-NVKKVALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKF 293
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--- 297
V A K +G+ + GP + +E EK+L YI+ G + GA+L GG+R
Sbjct: 294 VAALAERAKKIKLGNGLDADTEMGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDE 353
Query: 298 -AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH 356
AKGY+++PT+F V M I ++EIFGPV ++ ++ +E I+ +N + YGLA V+T
Sbjct: 354 LAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDTEEEAIRLANDTPYGLAGAVWTK 413
Query: 357 NLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 416
++ AN + R LR G+VWIN + + A P+GGYKQSG GRE G L Y + K +
Sbjct: 414 DIARANRVARRLRAGTVWINDYHPYFAEAPWGGYKQSGIGRELGPTGLEEYQETKHININ 473
Query: 417 LK 418
L
Sbjct: 474 LS 475
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. Length = 482 |
| >gnl|CDD|143421 cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Score = 482 bits (1244), Expect = e-169
Identities = 190/414 (45%), Positives = 251/414 (60%), Gaps = 3/414 (0%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
TA ER+ I+ R+ADL+ +++A L T + GKP + A+ EV ++A A +
Sbjct: 38 TTARERAAILRRWADLIRERAEDLARLLTLEQGKPLAE-ARGEVDYAASFLEWFAEEARR 96
Query: 61 IQGLTAPADGPYH-VQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 119
I G T P+ P + + +P+GV I PWNFP M K+ PALA G T+VLK AE+T
Sbjct: 97 IYGRTIPSPAPGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEET 156
Query: 120 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 179
PLSAL +++L EAGLP GVLN+V+G G AL + V K++FTGST GK+++ A
Sbjct: 157 PLSALALAELAEEAGLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQA 216
Query: 180 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239
A +K V+LELGG +PFIV +DAD+DKA + A + F N GQ C +R +VHES+YD+
Sbjct: 217 A-DTVKRVSLELGGNAPFIVFDDADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDE 275
Query: 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAK 299
FVEK K VG+ G GP I+ EK+ + V GAK+ TGG+RLG
Sbjct: 276 FVEKLVERVKKLKVGNGLDEGTDMGPLINERAVEKVEALVEDAVAKGAKVLTGGKRLGLG 335
Query: 300 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLD 359
GY+ +PTV T V DDMLI +E FGPV I+ + DEVI R+N + YGLAA VFT +L
Sbjct: 336 GYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTEDEVIARANDTPYGLAAYVFTRDLA 395
Query: 360 TANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 413
A + AL G V IN + DA PFGG K+SG GRE G L YL+ K V
Sbjct: 396 RAWRVAEALEAGMVGINTGLISDAEAPFGGVKESGLGREGGKEGLEEYLETKYV 449
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. Length = 451 |
| >gnl|CDD|143471 cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Score = 466 bits (1200), Expect = e-162
Identities = 191/419 (45%), Positives = 263/419 (62%), Gaps = 11/419 (2%)
Query: 2 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 61
+ ER+ I+ + AD +E + + +A ET DNGKP ++ ++P+ FRY+AG
Sbjct: 58 SVAERANILNKIADRIEENLELLAVAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQ 117
Query: 62 QGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 121
+G + D HEP+GV GQIIPWNFPLLM AWK+ PALA GNT+VLK A QTPL
Sbjct: 118 EGSLSEIDEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAPALAAGNTVVLKPASQTPL 177
Query: 122 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 181
S L + +L+ + LP GV+N+V+G+G AG LASH + KLAFTGSTT G++++Q AA+
Sbjct: 178 SILVLMELIGDL-LPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAAE 236
Query: 182 SNLKPVTLELGGKSPFIVCEDA-----DVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 236
NL PVTLELGGKSP I +DA D D AE FNQG+ C SR V ES+
Sbjct: 237 -NLIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESI 295
Query: 237 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 296
YD+F+E+A VG+P G Q+ +Q EKIL Y+ G + GA++ TGGERL
Sbjct: 296 YDEFIERAVERFEAIKVGNPLDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERL 355
Query: 297 ----GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAG 352
KGY+ +PT+ G +DM I ++EIFGPV +++ +KD +E I +N ++YGL G
Sbjct: 356 TLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITFKDEEEAIAIANDTEYGLGGG 415
Query: 353 VFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVK 411
V+T +++ A + R ++ G VW+NC+ + A PFGGYK+SG GRE L +Y Q K
Sbjct: 416 VWTRDINRALRVARGIQTGRVWVNCYHQYPAHAPFGGYKKSGIGRETHKMMLDHYQQTK 474
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. Length = 480 |
| >gnl|CDD|143427 cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Score = 464 bits (1197), Expect = e-162
Identities = 184/420 (43%), Positives = 251/420 (59%), Gaps = 11/420 (2%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
++ ER +++LR A L+ H DE+A LE+ D GKP Q A+ +V R F YY G ADK
Sbjct: 39 LSPAERGRLLLRIARLIREHADELARLESLDTGKPLTQ-ARADVEAAARYFEYYGGAADK 97
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
+ G T P Y V T+ EP GV G IIPWN+PL + V PALA GN +V+K AE P
Sbjct: 98 LHGETIPLGPGYFVYTVREPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAP 157
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
L+AL +++L EAGLP G LN+V+G G AGAAL +H VD ++FTGS TG V++ AA
Sbjct: 158 LTALRLAELAEEAGLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAA 217
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
+ N+ PVTLELGGKSP IV DAD++ A + A+ N GQ C AGSR VH S+YD+
Sbjct: 218 E-NVVPVTLELGGKSPQIVFADADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEV 276
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL---G 297
+E+ VG P GP I ++Q +++ ++ GA++ GG
Sbjct: 277 LERLVERFRALRVG-PGLEDPDLGPLISAKQLDRVEGFVARARARGARIVAGGRIAEGAP 335
Query: 298 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN 357
A GY++ PT+ V D +A++EIFGPV +++ + D E I +N + YGL AGV+T +
Sbjct: 336 AGGYFVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRD 395
Query: 358 LDTANTLMRALRVGSVWINCFDVFDAA---IPFGGYKQSGQGREKGSYSLSNYLQVKAVV 414
D A + R LR G V++N + +PFGG K+SG GREKG +L NY Q K V
Sbjct: 396 GDRALRVARRLRAGQVFVNNY--GAGGGIELPFGGVKKSGHGREKGLEALYNYTQTKTVA 453
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. Length = 454 |
| >gnl|CDD|183918 PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 456 bits (1176), Expect = e-159
Identities = 190/417 (45%), Positives = 258/417 (61%), Gaps = 6/417 (1%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
MTA ERS+I+ R D+L NDE+AALET D GKP ++++ ++ + YYAG A
Sbjct: 63 MTAMERSRILRRAVDILRERNDELAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPA 122
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
++G P G V T EP+GV I WN+P+ + WK PALA GN ++ K +E TP
Sbjct: 123 LEGEQIPLRGGSFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTP 182
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
L+AL ++++ EAGLP GV N+V G G GA L H ++ K++FTG TGK V+ AA
Sbjct: 183 LTALKLAEIYTEAGLPDGVFNVVQGDGRV-GAWLTEHPDIAKVSFTGGVPTGKKVMAAAA 241
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
S LK VT+ELGGKSP IV +DAD+D+AA++A A F++ GQ C G+R FV +S+ F
Sbjct: 242 AS-LKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAF 300
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL---- 296
+ + +GDP GP + +K+L YI G GA+L GGERL
Sbjct: 301 EARLLERVERIRIGDPMDPATNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGG 360
Query: 297 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH 356
A G ++ PTVFT DDM I ++EIFGPV S+L + D DEVI R+N ++YGLAAGVFT
Sbjct: 361 FANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDEDEVIARANDTEYGLAAGVFTA 420
Query: 357 NLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 413
+L A+ ++ L G WIN + A +P GGYKQSG GRE G +L +Y Q+K+V
Sbjct: 421 DLSRAHRVIHQLEAGICWINTWGESPAEMPVGGYKQSGIGRENGIATLEHYTQIKSV 477
|
Length = 488 |
| >gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Score = 451 bits (1162), Expect = e-158
Identities = 188/416 (45%), Positives = 236/416 (56%), Gaps = 64/416 (15%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
+ ER+ I+ + ADLLE +E+AALET + GKP + A EV FRY AG ADK
Sbjct: 13 LPPAERAAILRKIADLLEERREELAALETLETGKP-IEEALGEVARAIDTFRYAAGLADK 71
Query: 61 IQGLTAPADGPYHV-QTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 119
+ G P+ P EP+GV G I PWNFPLL+ AWK+ PALA GNT+VLK +E T
Sbjct: 72 LGGPELPSPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELT 131
Query: 120 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 179
PL+AL +++LL EAGLPPGV+N+V G G GAAL SH VDK++FTGST GK +++ A
Sbjct: 132 PLTALALAELLQEAGLPPGVVNVVPGGGDEVGAALLSHPRVDKISFTGSTAVGKAIMKAA 191
Query: 180 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239
A+ NLKPVTLELGGKSP IV EDAD+D A E A + FFN GQ C A SR VHES+Y
Sbjct: 192 AE-NLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICTAASRLLVHESIY-- 248
Query: 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAK 299
D F E+L
Sbjct: 249 ---------------DEFV-----------------------------------EKLV-- 256
Query: 300 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLD 359
TV V DM IA++EIFGPV ++++KD +E I +N ++YGL AGVFT +L+
Sbjct: 257 ------TVLVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLN 310
Query: 360 TANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 414
A + LR G+V+IN + PFGG K SG GRE G Y L Y + K VV
Sbjct: 311 RALRVAERLRAGTVYINDSSIGVGPEAPFGGVKNSGIGREGGPYGLEEYTRTKTVV 366
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367 |
| >gnl|CDD|143409 cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Score = 454 bits (1169), Expect = e-158
Identities = 193/418 (46%), Positives = 256/418 (61%), Gaps = 8/418 (1%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
+ ER +I+ + ADLL NDEIA LET DNGKP E A+ ++ + YYAG A
Sbjct: 38 TSGMERGRILRKAADLLRERNDEIARLETIDNGKPIE-EARVDIDSSADCLEYYAGLAPT 96
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
+ G P G T EP+GV I WN+P+ + +WK PALACGN +V K + TP
Sbjct: 97 LSGEHVPLPGGSFAYTRREPLGVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTP 156
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
L+AL ++++L EAGLP GV N+V G G T G L H +V K++FTGS TGK V+ AA
Sbjct: 157 LTALLLAEILTEAGLPDGVFNVVQGGGET-GQLLCEHPDVAKVSFTGSVPTGKKVMSAAA 215
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
K +K VTLELGGKSP I+ +DAD++ A A A F +QGQ C G+R FV S+ D+F
Sbjct: 216 K-GIKHVTLELGGKSPLIIFDDADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEF 274
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--- 297
E+ K +GDP Q G I E EK+L YI S GAK+ GGER+
Sbjct: 275 TERLVERTKKIRIGDPLDEDTQMGALISEEHLEKVLGYIESAKQEGAKVLCGGERVVPED 334
Query: 298 --AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFT 355
G+Y+ P V T DDM I ++EIFGPV SIL + +EVI+R+N + YGLAAGVFT
Sbjct: 335 GLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFT 394
Query: 356 HNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 413
+L A+ ++ L+ G+ WIN +++ +PFGGYKQSG GRE G+ +L +Y Q+K V
Sbjct: 395 RDLQRAHRVIAQLQAGTCWINTYNISPVEVPFGGYKQSGFGRENGTAALEHYTQLKTV 452
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. Length = 457 |
| >gnl|CDD|143456 cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Score = 443 bits (1141), Expect = e-154
Identities = 180/414 (43%), Positives = 241/414 (58%), Gaps = 11/414 (2%)
Query: 5 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 64
ER+ ++ R A+ E DE+A T + G P + +V + R A +
Sbjct: 59 ERAALLERIAEAYEARADELAQAITLEMGAPITLARAAQVGLGIGHLRAAADALKDFEFE 118
Query: 65 TAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 124
G V + EPIGV G I PWN+PL KV PALA G T+VLK +E PLSA+
Sbjct: 119 ERR--GNSLV--VREPIGVCGLITPWNWPLNQIVLKVAPALAAGCTVVLKPSEVAPLSAI 174
Query: 125 YVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 184
++++L EAGLP GV N+V+G GP G AL++H +VD ++FTGST GK V + AA + +
Sbjct: 175 ILAEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAADT-V 233
Query: 185 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKA 244
K V LELGGKS I+ +DAD++KA A F N GQ C A +R V S Y + E A
Sbjct: 234 KRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEEIA 293
Query: 245 NALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGG----ERLGAKG 300
A A VVGDP GP + QF+++ YI+ G++ GA+L GG E L +G
Sbjct: 294 AAAAEAYVVGDPRDPATTLGPLASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGL-ERG 352
Query: 301 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 360
Y++KPTVF V DM IA++EIFGPV SI+ Y D DE I +N + YGLA V++ + +
Sbjct: 353 YFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDEAIAIANDTPYGLAGYVWSADPER 412
Query: 361 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 414
A + R LR G V IN F+ PFGGYKQSG GRE G Y L +L+VK++
Sbjct: 413 ARAVARRLRAGQVHIN-GAAFNPGAPFGGYKQSGNGREWGRYGLEEFLEVKSIQ 465
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. Length = 466 |
| >gnl|CDD|143458 cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Score = 437 bits (1125), Expect = e-151
Identities = 190/419 (45%), Positives = 272/419 (64%), Gaps = 6/419 (1%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
M A +R +++ R ADL+E H +E+A +E+ D+G + + +T V M+ + FRY+AGW DK
Sbjct: 64 MNARDRGRLMYRLADLMEEHQEELATIESLDSGAVYTLALKTHVGMSIQTFRYFAGWCDK 123
Query: 61 IQGLTAPADG--PYHVQTL--HEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 116
IQG T P + P TL EPIGV G +IPWN+PL+M AWK+ LA GNT+VLK A
Sbjct: 124 IQGKTIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLAWKMAACLAAGNTVVLKPA 183
Query: 117 EQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 176
+ TPL+AL ++L +AG P GV+NI+ G G G L+ H +V KL FTGST GK ++
Sbjct: 184 QVTPLTALKFAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIM 243
Query: 177 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 236
+ A SNLK V+LELGGKSP I+ D D+DKA + ++FFN+G+ C A R FV ES+
Sbjct: 244 KSCAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESI 303
Query: 237 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 296
+D+FV + K +GDP GPQ +K+++Y GV GA L GG+++
Sbjct: 304 HDEFVRRVVEEVKKMKIGDPLDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQV 363
Query: 297 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK--DLDEVIQRSNASQYGLAAGVF 354
G++ +PTVFT V+D M IAK+E FGP+ I K+ D+D V+QR+N ++YGLA+GVF
Sbjct: 364 DRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDGDVDGVLQRANDTEYGLASGVF 423
Query: 355 THNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 413
T +++ A + L G+V++N ++ D A PFGG+KQSG G++ G +L+ YL+ K V
Sbjct: 424 TKDINKALYVSDKLEAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEEALNEYLKTKTV 482
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. Length = 486 |
| >gnl|CDD|143436 cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Score = 434 bits (1117), Expect = e-150
Identities = 189/415 (45%), Positives = 263/415 (63%), Gaps = 4/415 (0%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
M+ ER+ ++L+ ADL+ + +A +ET ++GKP Q A+ E+ L+RY A A
Sbjct: 40 MSGAERAAVLLKVADLIRARRERLALIETLESGKPISQ-ARGEIEGAADLWRYAASLART 98
Query: 61 IQGLTAPADGPYHVQ-TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 119
+ G + G + L EPIGV G I PWNFP L+ + K+ ALA G T+V+K +E T
Sbjct: 99 LHGDSYNNLGDDMLGLVLREPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFT 158
Query: 120 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 179
+ L +++LL EAGLP GV+NIV+GYG T G A+ H +VD ++FTGST GK + A
Sbjct: 159 SGTTLMLAELLIEAGLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAA 218
Query: 180 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239
A+ NLK V+LELGGK+P IV DAD+D AA+ + ++FN G+CC +GSR VHES+ D
Sbjct: 219 AR-NLKKVSLELGGKNPQIVFADADLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADA 277
Query: 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL-GA 298
FV A + K VGDP + G I+ Q KI Y+ +G GA L GGERL A
Sbjct: 278 FVAAVVARSRKVRVGDPLDPETKVGAIINEAQLAKITDYVDAGRAEGATLLLGGERLASA 337
Query: 299 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNL 358
G + +PT+FT V DM IA++EIFGPV S+L + +DE I +N + YGL+AGV++ ++
Sbjct: 338 AGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKDI 397
Query: 359 DTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 413
DTA T+ R +R G+VW+N F +PFGG+KQSG GRE G Y + Y ++K V
Sbjct: 398 DTALTVARRIRAGTVWVNTFLDGSPELPFGGFKQSGIGRELGRYGVEEYTELKTV 452
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. Length = 454 |
| >gnl|CDD|143435 cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 433 bits (1116), Expect = e-150
Identities = 192/420 (45%), Positives = 263/420 (62%), Gaps = 6/420 (1%)
Query: 2 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 61
T ER+ I+ + AD+++ + + +A +ET DNGKP ++ ++P+ FRY+AG
Sbjct: 58 TVAERANILNKIADIIDENKELLAMVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAE 117
Query: 62 QGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 121
+G D L EPIGV GQIIPWNFP LM AWK+ PALA GNT+V+K + T L
Sbjct: 118 EGSANMIDEDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAPALAAGNTVVIKPSSTTSL 177
Query: 122 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 181
S L ++K++ + LP GV+NIV+G G +G L +H +DKLAFTGST G+ V AAK
Sbjct: 178 SLLELAKIIQDV-LPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAAK 236
Query: 182 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 241
L P TLELGGKS I+ +DA+ DKA E A + FNQGQ CCAGSR FV E +YD+FV
Sbjct: 237 -KLIPATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFV 295
Query: 242 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG---- 297
K VG+P Q G Q++ +Q +KIL Y+ + GAK+ TGG RL
Sbjct: 296 AKLKEKFENVKVGNPLDPDTQMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGL 355
Query: 298 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN 357
KG++I+PT+ V +DM +A++EIFGPV +++K+K DEVI +N S+YGL GVFT +
Sbjct: 356 DKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTEDEVIDMANDSEYGLGGGVFTKD 415
Query: 358 LDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 417
++ A + RA+ G VW+N ++ A PFGGYK+SG GRE L Y Q+K + L
Sbjct: 416 INRALRVARAVETGRVWVNTYNQIPAGAPFGGYKKSGIGRETHKSMLDAYTQMKNIYIDL 475
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. Length = 475 |
| >gnl|CDD|143428 cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Score = 431 bits (1111), Expect = e-149
Identities = 193/421 (45%), Positives = 260/421 (61%), Gaps = 8/421 (1%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
T ER+K + A+ + +E+A LE DNGKP ++ A +V F YYA A++
Sbjct: 38 TTGAERAKYLRAIAEGVRERREELAELEARDNGKPLDE-AAWDVDDVAGCFEYYADLAEQ 96
Query: 61 IQGLTAPA----DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 116
+ A + + EP+GV G I PWNFPLLM AWKV PALA G T+VLK +
Sbjct: 97 LDAKAERAVPLPSEDFKARVRREPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPS 156
Query: 117 EQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 176
E T L+ L ++++ EAGLPPGVLN+V+G G AGA LA+H +DK++FTGST TG V+
Sbjct: 157 ELTSLTELELAEIAAEAGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVM 216
Query: 177 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 236
Q AA+ ++KPV+LELGGKSP IV +DAD++KA E A + F+N GQ C A SR VHES+
Sbjct: 217 QAAAQ-DIKPVSLELGGKSPIIVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESI 275
Query: 237 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER- 295
D F+E+ A VGDP + G++ GP + Q+EK+L +I G + GA+L GG R
Sbjct: 276 ADAFLERLATAAEAIRVGDPLEEGVRLGPLVSQAQYEKVLSFIARGKEEGARLLCGGRRP 335
Query: 296 -LGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVF 354
KGY+I PTVF V D I ++EIFGPV + + DE I +N S+YGLAA V
Sbjct: 336 AHLEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVI 395
Query: 355 THNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 414
+ + + + + AL G VWINC P+GGYK+SG GRE G + L NYL+VK +
Sbjct: 396 SRDAERCDRVAEALEAGIVWINCSQPCFPQAPWGGYKRSGIGRELGEWGLDNYLEVKQIT 455
Query: 415 T 415
Sbjct: 456 R 456
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. Length = 456 |
| >gnl|CDD|200131 TIGR01804, BADH, glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 427 bits (1100), Expect = e-148
Identities = 181/415 (43%), Positives = 260/415 (62%), Gaps = 5/415 (1%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
M+ ER +I+ R ADL+ N+E+A LET D GK +++ ++ +F ++AG A
Sbjct: 54 MSPMERGRILRRAADLIRERNEELAKLETLDTGKTLQETIVADMDSGADVFEFFAGLAPA 113
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
+ G P GP T+ EP+GV I WN+PL + +WK+ PALA GN +V K +E TP
Sbjct: 114 LNGEIIPLGGPSFAYTIREPLGVCVGIGAWNYPLQIASWKIAPALAAGNAMVFKPSENTP 173
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
L+AL V++++ EAGLP GV N+V G G G L +H +V K++FTG TGK ++ AA
Sbjct: 174 LTALKVAEIMEEAGLPKGVFNVVQGDGAEVGPLLVNHPDVAKVSFTGGVPTGKKIMA-AA 232
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
+LK VT+ELGGKSP IV +DAD++ A + A FF+ GQ C G+R FVH+ + ++F
Sbjct: 233 AGHLKHVTMELGGKSPLIVFDDADLESAVDGAMLGNFFSAGQVCSNGTRVFVHKKIKERF 292
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--- 297
+ + + +GDPF + GP I + +K+L YI G GA L TGG R
Sbjct: 293 LARLVERTERIKLGDPFDEATEMGPLISAAHRDKVLSYIEKGKAEGATLATGGGRPENVG 352
Query: 298 -AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH 356
G++++PTVF DDM I ++EIFGPV ++L + D DEVI R+N ++YGLA GVFT
Sbjct: 353 LQNGFFVEPTVFADCTDDMTIVREEIFGPVMTVLTFSDEDEVIARANDTEYGLAGGVFTA 412
Query: 357 NLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVK 411
+L A+ + L G+VWIN ++++ A PFGGYKQSG GRE G +L++Y +VK
Sbjct: 413 DLGRAHRVADQLEAGTVWINTYNLYPAEAPFGGYKQSGIGRENGKAALAHYTEVK 467
|
Under osmotic stress, betaine aldehyde dehydrogenase oxidizes glycine betaine aldehyde into the osmoprotectant glycine betaine, via the second of two oxidation steps from exogenously supplied choline or betaine aldehyde. This choline-glycine betaine synthesis pathway can be found in gram-positive and gram-negative bacteria. In Escherichia coli, betaine aldehyde dehydrogenase (betB) is osmotically co-induced with choline dehydrogenase (betA) in the presence of choline. These dehydrogenases are located in a betaine gene cluster with the upstream choline transporter (betT) and transcriptional regulator (betI). Similar to E.coli, betaine synthesis in Staphylococcus xylosus is also influenced by osmotic stress and the presence of choline with genes localized in a functionally equivalent gene cluster. Organization of the betaine gene cluster in Sinorhizobium meliloti and Bacillus subtilis differs from that of E.coli by the absence of upstream choline transporter and transcriptional regulator homologues. Additionally, B.subtilis co-expresses a type II alcohol dehydrogenase with betaine aldehyde dehydrogenase instead of choline dehydrogenase as in E.coli, St.xylosus, and Si.meliloti. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171) [Cellular processes, Adaptations to atypical conditions]. Length = 467 |
| >gnl|CDD|143411 cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Score = 425 bits (1096), Expect = e-147
Identities = 178/415 (42%), Positives = 248/415 (59%), Gaps = 4/415 (0%)
Query: 2 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 61
T ERSK +L+ AD +E + +E+AALE+ + GKP E+P FR++AG A +
Sbjct: 39 TPAERSKALLKLADAIEENAEELAALESRNTGKPLHLVRDDELPGAVDNFRFFAGAARTL 98
Query: 62 QGLTAPADGPYHVQTL-HEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
+G A P H + EPIGV QI PWN+PL+M AWK+ PALA GNT+VLK +E TP
Sbjct: 99 EGPAAGEYLPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTP 158
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
L+ L +++L E LPPGV+N+V G G +AG AL +H V ++ TGS TGK V + AA
Sbjct: 159 LTTLLLAELAAE-VLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAA 217
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
LK V LELGGK+P IV +DAD+D A A ++N GQ C A R +VHESVYD+F
Sbjct: 218 D-TLKRVHLELGGKAPVIVFDDADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEF 276
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 300
V VGDP + GP + Q E++ ++ A++ TGG R G
Sbjct: 277 VAALVEAVSAIRVGDPDDEDTEMGPLNSAAQRERVAGFV-ERAPAHARVLTGGRRAEGPG 335
Query: 301 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 360
Y+ +PTV GV D I ++EIFGPV ++ + D DE I+ +N +YGLA+ V+T ++
Sbjct: 336 YFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELANDVEYGLASSVWTRDVGR 395
Query: 361 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 415
A L L G+VW+N A +P GG+KQSG G++ Y+L +Y ++K V+
Sbjct: 396 AMRLSARLDFGTVWVNTHIPLAAEMPHGGFKQSGYGKDLSIYALEDYTRIKHVMV 450
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. Length = 450 |
| >gnl|CDD|143408 cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Score = 423 bits (1090), Expect = e-146
Identities = 174/423 (41%), Positives = 238/423 (56%), Gaps = 12/423 (2%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKP--FEQSAQTEVPMTTRLFRYYAGWA 58
A ER++ + + + LE +E+ AL + G P ++ Q + P+ RY+A A
Sbjct: 39 TDAEERARCLRQLHEALEARKEELRALLVAEVGAPVMTARAMQVDGPIGH--LRYFADLA 96
Query: 59 DKI---QGLTAPAD--GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVL 113
D L PA GP EP+GV I PWNFP + K+ PALA GNT+VL
Sbjct: 97 DSFPWEFDLPVPALRGGPGRRVVRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVL 156
Query: 114 KTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGK 173
K A TPLSAL + +++ E LP GV+N+V+G G AL + VD ++FTGST G+
Sbjct: 157 KPAPDTPLSALLLGEIIAETDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGR 216
Query: 174 IVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVH 233
++ AA + LK V LELGGKS IV +DAD+ AA A N GQ C +R V
Sbjct: 217 RIMAQAA-ATLKRVLLELGGKSANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVP 275
Query: 234 ESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGG 293
S YD+ VE A VGDP G GP I + Q +++ YI G D GA+L TGG
Sbjct: 276 RSRYDEVVEALAAAFEALPVGDPADPGTVMGPLISAAQRDRVEGYIARGRDEGARLVTGG 335
Query: 294 ERL--GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAA 351
R KG+Y++PT+F V +DM IA++EIFGPV ++ Y D DE ++ +N S YGL+
Sbjct: 336 GRPAGLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSG 395
Query: 352 GVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVK 411
GV++ ++D A + R +R GSV IN + PFGGYKQSG GRE G L +L+ K
Sbjct: 396 GVWSADVDRAYRVARRIRTGSVGINGGGGYGPDAPFGGYKQSGLGRENGIEGLEEFLETK 455
Query: 412 AVV 414
++
Sbjct: 456 SIA 458
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. Length = 459 |
| >gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 419 bits (1080), Expect = e-144
Identities = 175/416 (42%), Positives = 248/416 (59%), Gaps = 6/416 (1%)
Query: 2 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 61
A ER+ + + ADL+ + DE+A L + GK A+ EV T Y A WA +I
Sbjct: 55 PAIERAAYLRKLADLIRENADELAKLIVEEQGKTLSL-ARVEVEFTADYIDYMAEWARRI 113
Query: 62 QGLTAPADGPY-HVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
+G P+D P ++ PIGV I+PWNFP + A K+ PAL GNTIV+K +E+TP
Sbjct: 114 EGEIIPSDRPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPALVTGNTIVIKPSEETP 173
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
L+AL ++L+ EAGLP GVLNIV+G G G AL +H +V ++ TGST G+ +++ AA
Sbjct: 174 LNALEFAELVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAA 233
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
+ N+ V+LELGGK+P IV +DAD+D A + + N GQ C R +VHE +YD+F
Sbjct: 234 E-NITKVSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEF 292
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL-GAK 299
+EK VGDPF GP ++ +K+ + + V+ GA L TGG+R G K
Sbjct: 293 MEKLVEKMKAVKVGDPFDAATDMGPLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEK 352
Query: 300 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLD 359
GY+ +PTV T V+ DM I ++EIFGPV ++K+ LDE I+ +N S+YGL + ++T NL+
Sbjct: 353 GYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIELANDSEYGLTSYIYTENLN 412
Query: 360 TANTLMRALRVGSVWINCFDVFDAAIPF-GGYKQSGQGREKGSYSLSNYLQVKAVV 414
TA L G +IN + F+A F G+K+SG G G + L YLQ K V
Sbjct: 413 TAMRATNELEFGETYINREN-FEAMQGFHAGWKKSGLGGADGKHGLEEYLQTKVVY 467
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. Length = 468 |
| >gnl|CDD|143415 cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Score = 412 bits (1061), Expect = e-141
Identities = 179/418 (42%), Positives = 246/418 (58%), Gaps = 7/418 (1%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
+ R+ I+ + D LE +E+A L T + GK + A+ EV ++FRYYAG A +
Sbjct: 56 TSPEARADILDKAGDELEARKEELARLLTREEGKTLPE-ARGEVTRAGQIFRYYAGEALR 114
Query: 61 IQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 119
+ G T P+ P V+T EP+GV G I PWNFP+ + AWK+ PALA GNT+V K AE T
Sbjct: 115 LSGETLPSTRPGVEVETTREPLGVVGLITPWNFPIAIPAWKIAPALAYGNTVVFKPAELT 174
Query: 120 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 179
P SA + ++L EAGLP GV N+V G G G AL H +VD ++FTGST G+ + A
Sbjct: 175 PASAWALVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAA 234
Query: 180 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239
A + V LE+GGK+P +V +DAD+D A E A FF+ GQ C A SR V E ++D+
Sbjct: 235 A-ARGARVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDR 293
Query: 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL--G 297
FVE VGD G+ GP + Q EK L+YI GAKL GGERL
Sbjct: 294 FVEALVERTKALKVGDALDEGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRP 353
Query: 298 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN 357
+GYY+ P +F GV +DM IA++EIFGPV ++++ +D DE + +N +++GL+AG+ T +
Sbjct: 354 DEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDYDEALAIANDTEFGLSAGIVTTS 413
Query: 358 LDTANTLMRALRVGSVWINCFDV-FDAAIPFGGYKQSGQG-REKGSYSLSNYLQVKAV 413
L A R + G V +N D +PFGG K S G RE+G +L Y +K V
Sbjct: 414 LKHATHFKRRVEAGVVMVNLPTAGVDYHVPFGGRKGSSYGPREQGEAALEFYTTIKTV 471
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. Length = 473 |
| >gnl|CDD|143424 cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Score = 409 bits (1053), Expect = e-141
Identities = 182/412 (44%), Positives = 234/412 (56%), Gaps = 12/412 (2%)
Query: 5 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA--DKIQ 62
ER +L AD +E + +E+A L T + GKP + AQ EV RY A D++
Sbjct: 42 ERRAALLAIADAIEANAEELARLLTLEQGKPLAE-AQFEVGGAVAWLRYTASLDLPDEVI 100
Query: 63 GLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 122
V+ +P+GV I+PWNFPLL+ AWK+ PAL GNT+VLK + TPL
Sbjct: 101 EDDDTR----RVELRRKPLGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLC 156
Query: 123 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 182
L + +L E LPPGVLN+VSG G G AL SH ++ K++FTGST TGK V+ AAK
Sbjct: 157 TLKLGELAQEV-LPPGVLNVVSG-GDELGPALTSHPDIRKISFTGSTATGKKVMASAAK- 213
Query: 183 NLKPVTLELGGKSPFIVCEDADVDKAAE-LAHYALFFNQGQCCCAGSRTFVHESVYDQFV 241
LK VTLELGG IV D D+D A L A F N GQ C A R +VHES+YD+F
Sbjct: 214 TLKRVTLELGGNDAAIVLPDVDIDAVAPKLFWGA-FINSGQVCAAIKRLYVHESIYDEFC 272
Query: 242 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY 301
E ALA VVGD G GP + Q++K+ + + GAK+ GGE L GY
Sbjct: 273 EALVALAKAAVVGDGLDPGTTLGPVQNKMQYDKVKELVEDAKAKGAKVLAGGEPLDGPGY 332
Query: 302 YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 361
+I PT+ + I +E FGPV +LKY D DEVI R+N S+YGL A V++ +L+ A
Sbjct: 333 FIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARANDSEYGLGASVWSSDLERA 392
Query: 362 NTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 413
+ R L G+VWIN D PFGG+KQSG G E G L Y Q + +
Sbjct: 393 EAVARRLEAGTVWINTHGALDPDAPFGGHKQSGIGVEFGIEGLKEYTQTQVI 444
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. Length = 446 |
| >gnl|CDD|237391 PRK13473, PRK13473, gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 409 bits (1053), Expect = e-140
Identities = 166/417 (39%), Positives = 243/417 (58%), Gaps = 10/417 (2%)
Query: 2 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 61
T ER++ +L+ AD +E + DE A LE+ + GKP + E+P +FR++AG A +
Sbjct: 59 TPKERAEALLKLADAIEENADEFARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCL 118
Query: 62 QGLTAPADGPY---HVQTLH-EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAE 117
+G A G Y H + +P+GV I PWN+PL+M AWK+ PALA GNT+VLK +E
Sbjct: 119 EGKAA---GEYLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLAPALAAGNTVVLKPSE 175
Query: 118 QTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 177
TPL+AL +++L + LPPGVLN+V+G G T G AL H +V ++ TGS TGK VL
Sbjct: 176 ITPLTALKLAELAADI-LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLS 234
Query: 178 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 237
AA S +K LELGGK+P IV +DAD+D E ++N GQ C A R + +Y
Sbjct: 235 AAADS-VKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIY 293
Query: 238 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI-RSGVDGGAKLETGGERL 296
D V K A VGDP + GP I + +++ ++ R+ G ++ TGGE
Sbjct: 294 DDLVAKLAAAVATLKVGDPDDEDTELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEAP 353
Query: 297 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH 356
KGYY +PT+ G + D I + E+FGPV S+ + D D+ ++ +N S YGLA+ V+T
Sbjct: 354 DGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVRWANDSDYGLASSVWTR 413
Query: 357 NLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 413
++ A+ + L+ G W+N + + +P GG KQSG G++ Y L +Y V+ V
Sbjct: 414 DVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKQSGYGKDMSLYGLEDYTVVRHV 470
|
Length = 475 |
| >gnl|CDD|143457 cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 408 bits (1050), Expect = e-140
Identities = 171/419 (40%), Positives = 235/419 (56%), Gaps = 10/419 (2%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
++ ER+ ++ R AD LE DE+A L T +NG P S + + P L RYYA A
Sbjct: 57 LSPAERAAVLRRLADALEARADELARLWTAENGMPISWSRRAQGPGPAALLRYYAALARD 116
Query: 61 ---IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAE 117
+ G V EP+GV I+PWN PL + A K+ PALA G T+VLK +
Sbjct: 117 FPFEERRPGSGGGHVLV--RREPVGVVAAIVPWNAPLFLAALKIAPALAAGCTVVLKPSP 174
Query: 118 QTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 177
+TPL A +++ EAGLPPGV+N+V G L H VDK++FTGST G+ +
Sbjct: 175 ETPLDAYLLAEAAEEAGLPPGVVNVVPA-DREVGEYLVRHPGVDKVSFTGSTAAGRRIAA 233
Query: 178 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 237
+ L VTLELGGKS IV +DAD+D A A N GQ C A +R V S Y
Sbjct: 234 VCG-ERLARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRY 292
Query: 238 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 297
D+ VE A VGDP Q GP + Q E++ YI G GA+L TGG R
Sbjct: 293 DEVVEALAAAVAALKVGDPLDPATQIGPLASARQRERVEGYIAKGRAEGARLVTGGGRPA 352
Query: 298 A--KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFT 355
+G++++PT+F V +DM IA++EIFGPV S++ Y D D+ ++ +N S YGL+ V+T
Sbjct: 353 GLDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRIANDSDYGLSGSVWT 412
Query: 356 HNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 414
+++ + R +R G+V +N F + D PFGG+KQSG GRE G L YL+ K++
Sbjct: 413 ADVERGLAVARRIRTGTVGVNGFRL-DFGAPFGGFKQSGIGREGGPEGLDAYLETKSIY 470
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. Length = 471 |
| >gnl|CDD|143434 cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 402 bits (1035), Expect = e-137
Identities = 186/426 (43%), Positives = 258/426 (60%), Gaps = 16/426 (3%)
Query: 2 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 61
+ ER+ I+ + AD +E + + +A ETWDNGKP ++ ++P+ FRY+AG
Sbjct: 58 SVAERANILNKIADRMEANLEMLAVAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQ 117
Query: 62 QGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 121
+G + D HEP+GV GQIIPWNFPLLM WK+ PALA GN +VLK AEQTP
Sbjct: 118 EGSISEIDENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAPALAAGNCVVLKPAEQTPA 177
Query: 122 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 181
S L + +L+ + LPPGV+N+V+G+G AG LAS + K+AFTG TTTG++++Q A++
Sbjct: 178 SILVLMELIGDL-LPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYASE 236
Query: 182 SNLKPVTLELGGKSPFIVCE------DADVDKAAELAHYALF-FNQGQCCCAGSRTFVHE 234
N+ PVTLELGGKSP I DA DKA E + +F NQG+ C SR + E
Sbjct: 237 -NIIPVTLELGGKSPNIFFADVMDADDAFFDKALE--GFVMFALNQGEVCTCPSRALIQE 293
Query: 235 SVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGE 294
S+YD+F+E+A G+P G Q EQ EKIL YI G + GA++ TGGE
Sbjct: 294 SIYDRFMERALERVKAIKQGNPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGE 353
Query: 295 R----LGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLA 350
R G Y PT F G + M I ++EIFGPV ++ +KD +E ++ +N + YGL
Sbjct: 354 RNELGGLLGGGYYVPTTFKG-GNKMRIFQEEIFGPVLAVTTFKDEEEALEIANDTLYGLG 412
Query: 351 AGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQV 410
AGV+T + +TA + R ++ G VW NC+ ++ A FGGYKQSG GRE L +Y Q
Sbjct: 413 AGVWTRDGNTAYRMGRGIQAGRVWTNCYHLYPAHAAFGGYKQSGIGRENHKMMLDHYQQT 472
Query: 411 KAVVTA 416
K ++ +
Sbjct: 473 KNLLVS 478
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. Length = 479 |
| >gnl|CDD|143429 cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Score = 402 bits (1035), Expect = e-137
Identities = 185/408 (45%), Positives = 253/408 (62%), Gaps = 12/408 (2%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
+ + R++ + R A +++H A LE+ DNGKP +S ++P+ R F ++AGWA
Sbjct: 78 LPGHVRARHLYRIARHIQKHQRLFAVLESLDNGKPIRESRDCDIPLVARHFYHHAGWAQL 137
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
+ T A +P+GV GQI+PWNFPLLM AWK+ PALA GNT+VLK AE TP
Sbjct: 138 LD--TELAG--------WKPVGVVGQIVPWNFPLLMLAWKICPALAMGNTVVLKPAEYTP 187
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
L+AL +++ EAGLPPGVLNIV+G G G+ALA+H VDK+AFTGST G+ + + A
Sbjct: 188 LTALLFAEICAEAGLPPGVLNIVTGNGSF-GSALANHPGVDKVAFTGSTEVGRALRRATA 246
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
+ K ++LELGGKSPFIV +DAD+D A E A++FNQGQ CCAGSR V ESV ++
Sbjct: 247 GTG-KKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEEL 305
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 300
+ K VGDP I G +D Q ++I + + G GA + G L +KG
Sbjct: 306 IRKLKERMSHLRVGDPLDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKG 365
Query: 301 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 360
+ PT+FT V IA++EIFGPV +L ++ E + +N + YGLAA V++ NL
Sbjct: 366 PFYPPTLFTNVPPASRIAQEEIFGPVLVVLTFRTAKEAVALANNTPYGLAASVWSENLSL 425
Query: 361 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYL 408
A + +L+ G VWIN ++FDAA FGGY++SG GRE G L YL
Sbjct: 426 ALEVALSLKAGVVWINGHNLFDAAAGFGGYRESGFGREGGKEGLYEYL 473
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. Length = 480 |
| >gnl|CDD|215260 PLN02467, PLN02467, betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 398 bits (1025), Expect = e-136
Identities = 182/427 (42%), Positives = 249/427 (58%), Gaps = 8/427 (1%)
Query: 2 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 61
T R+K + A + E+A LET D GKP +++A + F YYA A+ +
Sbjct: 70 TGAVRAKYLRAIAAKITERKSELAKLETLDCGKPLDEAAWDMDDVAG-CFEYYADLAEAL 128
Query: 62 QGL-TAPADGP---YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAE 117
AP P + L EP+GV G I PWN+PLLM WKV PALA G T VLK +E
Sbjct: 129 DAKQKAPVSLPMETFKGYVLKEPLGVVGLITPWNYPLLMATWKVAPALAAGCTAVLKPSE 188
Query: 118 QTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 177
++ L ++ + E GLPPGVLN+V+G G AGA LASH VDK+AFTGST TG+ ++
Sbjct: 189 LASVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTATGRKIMT 248
Query: 178 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 237
AA+ +KPV+LELGGKSP IV +D D+DKA E A + F+ GQ C A SR VHE +
Sbjct: 249 AAAQ-MVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERIA 307
Query: 238 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 297
+F+EK A + DP + G + GP + Q+EK+LK+I + GA + GG+R
Sbjct: 308 SEFLEKLVKWAKNIKISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPE 367
Query: 298 --AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFT 355
KG++I+PT+ T V M I ++E+FGPV + + DE I+ +N S YGLA V +
Sbjct: 368 HLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTFSTEDEAIELANDSHYGLAGAVIS 427
Query: 356 HNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 415
++L+ + A + G VWINC P+GG K+SG GRE G + L NYL VK V
Sbjct: 428 NDLERCERVSEAFQAGIVWINCSQPCFCQAPWGGIKRSGFGRELGEWGLENYLSVKQVTK 487
Query: 416 ALKNPAW 422
+ + W
Sbjct: 488 YISDEPW 494
|
Length = 503 |
| >gnl|CDD|143422 cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 391 bits (1008), Expect = e-134
Identities = 167/419 (39%), Positives = 232/419 (55%), Gaps = 14/419 (3%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAAL---ETWDNGKPFEQSAQTEVPMTTRLFRYYAGW 57
ER+ I+ + A++LE DEIA E+ G A EV + R AG
Sbjct: 19 TPPQERAAILRKAAEILEERRDEIADWLIRES---GSTR-PKAAFEVGAAIAILREAAGL 74
Query: 58 ADKIQGLTAPADGPYHVQ-TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 116
+ +G P+D P P+GV G I P+NFPL++ V PALA GN +VLK
Sbjct: 75 PRRPEGEILPSDVPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPD 134
Query: 117 EQTPLS-ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 175
+TP++ L ++++ EAGLP GVLN+V G G G AL H V ++FTGST G+ +
Sbjct: 135 SRTPVTGGLLIAEIFEEAGLPKGVLNVVPGGGSEIGDALVEHPRVRMISFTGSTAVGRHI 194
Query: 176 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES 235
+LA + +LK V LELGG +P IV +DAD+D A A + F +QGQ C A R VHES
Sbjct: 195 GELAGR-HLKKVALELGGNNPLIVLDDADLDLAVSAAAFGAFLHQGQICMAAGRILVHES 253
Query: 236 VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER 295
VYD+FVEK A A VGDP GP I+ Q +++ + V GA+L TGG
Sbjct: 254 VYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAVAAGARLLTGGT- 312
Query: 296 LGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFT 355
+G + +PTV + V DM I ++EIFGPV ++ + D +E ++ +N ++YGL+A VFT
Sbjct: 313 --YEGLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTEYGLSAAVFT 370
Query: 356 HNLDTANTLMRALRVGSVWINCFDVFDAA-IPFGGYKQSGQGREKGSYSLSNYLQVKAV 413
+L+ A L G V IN V D +PFGG K SG GR G SL + + + +
Sbjct: 371 RDLERAMAFAERLETGMVHINDQTVNDEPHVPFGGVKASGGGRFGGPASLEEFTEWQWI 429
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. Length = 431 |
| >gnl|CDD|143426 cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Score = 385 bits (990), Expect = e-131
Identities = 188/423 (44%), Positives = 251/423 (59%), Gaps = 17/423 (4%)
Query: 3 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 62
A ER K++ R AD LE ++E+A L + G A+ E + LFRY+ G A +++
Sbjct: 40 ARERGKLLARIADALEARSEELARLLALETGNALRTQARPEAAVLADLFRYFGGLAGELK 99
Query: 63 GLTAPADGPYHVQ-TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 121
G T P GP + T+ EP+GV G I+PWN PL++ A K+ PAL GNT+VLK AE PL
Sbjct: 100 GETLPF-GPDVLTYTVREPLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPL 158
Query: 122 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 181
+ L ++++L + LP GVLN+++GYG GAAL H +VDK+ FTGST GKI+ + AA
Sbjct: 159 AVLLLAEILAQV-LPAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAAD 217
Query: 182 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYAL-FFNQGQCCCAGSRTFVHESVYDQF 240
L PV+LELGGKSP IV DAD+D A + A + F QGQ C AGSR FVHE +YD F
Sbjct: 218 -RLIPVSLELGGKSPMIVFPDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAF 276
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG-GAKLETGG----ER 295
+EK A K +GDP G I +QF K+ YI G+ GA + GG E
Sbjct: 277 LEKLVAKLSKLKIGDPLDEATDIGAIISEKQFAKVCGYIDLGLSTSGATVLRGGPLPGEG 336
Query: 296 LGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFT 355
A G++++PT+F+GV ++ +A++EIFGPV + +KD DEVI +N S YGLAA V+T
Sbjct: 337 PLADGFFVQPTIFSGVDNEWRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVWT 396
Query: 356 HNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYL----QVK 411
+L A AL G V +N +GG+KQSG GRE SL L Q K
Sbjct: 397 RDLGRALRAAHALEAGWVQVNQGGGQQPGQSYGGFKQSGLGRE---ASLEGMLEHFTQKK 453
Query: 412 AVV 414
V
Sbjct: 454 TVN 456
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. Length = 457 |
| >gnl|CDD|143467 cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 383 bits (985), Expect = e-130
Identities = 183/422 (43%), Positives = 243/422 (57%), Gaps = 17/422 (4%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
+ AYER++I+ R A LLE +E A + GKP + A+ EV R A A +
Sbjct: 40 LPAYERAEILERAAQLLEERREEFARTIALEAGKPIKD-ARKEVDRAIETLRLSAEEAKR 98
Query: 61 IQGLTAPADGPYHVQ-----TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKT 115
+ G T P D + T+ EPIGV I P+NFPL + A KVGPA+A GN +VLK
Sbjct: 99 LAGETIPFDASPGGEGRIGFTIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKP 158
Query: 116 AEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 175
A QTPLSAL +++LL EAGLP G LN+V+G G T G AL + V ++FTGS G+
Sbjct: 159 ASQTPLSALKLAELLLEAGLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEA- 217
Query: 176 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES 235
+A K+ LK VTLELG + IV DAD++KA E F N GQ C + R FVHE
Sbjct: 218 --IARKAGLKKVTLELGSNAAVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHED 275
Query: 236 VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER 295
+YD+F+E+ A K VVGDP GP I + E+I +++ V+GGA+L TGG+R
Sbjct: 276 IYDEFLERFVAATKKLVVGDPLDEDTDVGPMISEAEAERIEEWVEEAVEGGARLLTGGKR 335
Query: 296 LGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFT 355
GA ++PTV T V DM + +E+F PV S+ + LDE I +N S YGL AGVFT
Sbjct: 336 DGA---ILEPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVFT 392
Query: 356 HNLDTANTLMRALRVGSVWINCFDVFDA---AIPFGGYKQSGQGREKGSYSLSNYLQVKA 412
++L A R L VG V IN D +P+GG K+SG GRE Y++ ++K
Sbjct: 393 NDLQKALKAARELEVGGVMIN--DSSTFRVDHMPYGGVKESGTGREGPRYAIEEMTEIKL 450
Query: 413 VV 414
V
Sbjct: 451 VC 452
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 453 |
| >gnl|CDD|143425 cd07107, ALDH_PhdK-like, Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Score = 377 bits (971), Expect = e-128
Identities = 166/414 (40%), Positives = 241/414 (58%), Gaps = 8/414 (1%)
Query: 5 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 64
ER++++ A L H +E+A ++ D G P + +V + L Y+AG +++G
Sbjct: 42 ERARMLRELATRLREHAEELALIDALDCGNPV-SAMLGDVMVAAALLDYFAGLVTELKGE 100
Query: 65 TAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 124
T P G TL EP GV +I+ +N PL+ A K+ LA GNT+V+K EQ PLSAL
Sbjct: 101 TIPVGGRNLHYTLREPYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSAL 160
Query: 125 YVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 184
+++L E LPPGV NI+ G G TAGAAL H +V ++A GS TG+ +++ AA+ +
Sbjct: 161 RLAELAREV-LPPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEG-I 218
Query: 185 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFN-QGQCCCAGSRTFVHESVYDQFVEK 243
K VTLELGGK+ IV DAD + AA+ A + F GQ C + SR FVHES+YD+ + +
Sbjct: 219 KHVTLELGGKNALIVFPDADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLAR 278
Query: 244 ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER----LGAK 299
VGDP GP + +Q+++++ YI S GA+L TGG R
Sbjct: 279 VVERVAAIKVGDPTDPATTMGPLVSRQQYDRVMHYIDSAKREGARLVTGGGRPEGPALEG 338
Query: 300 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLD 359
G+Y++PTVF V M IA++EIFGPV S+L+++D E++ ++N +YGL A ++T+++
Sbjct: 339 GFYVEPTVFADVTPGMRIAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTNDIS 398
Query: 360 TANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 413
A+ R + G VWIN PFGG K SG GRE+ L +Y Q K V
Sbjct: 399 QAHRTARRVEAGYVWINGSSRHFLGAPFGGVKNSGIGREECLEELLSYTQEKNV 452
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. Length = 456 |
| >gnl|CDD|143431 cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Score = 375 bits (965), Expect = e-127
Identities = 176/419 (42%), Positives = 246/419 (58%), Gaps = 8/419 (1%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
T ER +I+LR ADL+E+H +E+A LET +GK S EV + RY+AGWA K
Sbjct: 57 TTPAERGRILLRLADLIEQHGEELAQLETLCSGKSIHLSRAFEVGQSANFLRYFAGWATK 116
Query: 61 IQGLT------APADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLK 114
I G T + Y T EP+GV I+PWNF +++ WK+G ALA G TIV+K
Sbjct: 117 INGETLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAVWKIGAALATGCTIVIK 176
Query: 115 TAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKI 174
+E TPL+ L V++L EAG+P GVLN+V+G G GA L SH +V K++FTGS TGK
Sbjct: 177 PSEFTPLTLLRVAELAKEAGIPDGVLNVVNGKGAV-GAQLISHPDVAKVSFTGSVATGKK 235
Query: 175 VLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHE 234
+ + AA S+L VTLELGGK+ +DAD+D E A F +QGQ C A R +VH
Sbjct: 236 IGRQAA-SDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHR 294
Query: 235 SVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGE 294
S +D+ V K VG P + GP + F+K+ Y+ G ++ GGE
Sbjct: 295 SKFDELVTKLKQALSSFQVGSPMDESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGE 354
Query: 295 RLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVF 354
L +GY+++PT+ D + ++E FGPV S + Y+D +E+IQ N + +GL A V+
Sbjct: 355 ALAGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEEELIQLINDTPFGLTASVW 414
Query: 355 THNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 413
T+NL A + + G+VW+N D A+PFGG KQSG GRE GS + +Y ++K+V
Sbjct: 415 TNNLSKALRYIPRIEAGTVWVNMHTFLDPAVPFGGMKQSGIGREFGSAFIDDYTELKSV 473
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. Length = 477 |
| >gnl|CDD|182108 PRK09847, PRK09847, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 375 bits (963), Expect = e-126
Identities = 170/415 (40%), Positives = 250/415 (60%), Gaps = 3/415 (0%)
Query: 5 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 64
+R ++ + ADL+E H +E+A LET D GKP S + ++P R R+YA DK+ G
Sbjct: 82 KRKAVLNKLADLMEAHAEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGE 141
Query: 65 TAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 124
A + EP+GV I+PWNFPLL+ WK+GPALA GN+++LK +E++PLSA+
Sbjct: 142 VATTSSHELAMIVREPVGVIAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLSAI 201
Query: 125 YVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 184
++ L EAGLP GVLN+V+G+G AG AL+ H ++D +AFTGST TGK +L+ A SN+
Sbjct: 202 RLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDSNM 261
Query: 185 KPVTLELGGKSPFIVCEDA-DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 243
K V LE GGKS IV D D+ +AA +F+NQGQ C AG+R + ES+ D+F+
Sbjct: 262 KRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLAL 321
Query: 244 ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYI 303
A G P G ID + + +IR G G L G R I
Sbjct: 322 LKQQAQNWQPGHPLDPATTMGTLIDCAHADSVHSFIREGESKGQLLLDG--RNAGLAAAI 379
Query: 304 KPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANT 363
PT+F V + ++++EIFGPV + ++ ++ +Q +N SQYGL A V+T +L A+
Sbjct: 380 GPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQALQLANDSQYGLGAAVWTRDLSRAHR 439
Query: 364 LMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 418
+ R L+ GSV++N ++ D +PFGGYKQSG GR+K ++L + ++K + +L+
Sbjct: 440 MSRRLKAGSVFVNNYNDGDMTVPFGGYKQSGNGRDKSLHALEKFTELKTIWISLE 494
|
Length = 494 |
| >gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 374 bits (962), Expect = e-126
Identities = 175/428 (40%), Positives = 254/428 (59%), Gaps = 11/428 (2%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA-D 59
+ A ER + + + ADL+E+H DEIA LE D G+P Q+ Q +V FR++A +
Sbjct: 57 LKAAERKRYLHKIADLIEQHADEIAVLECLDCGQPLRQTRQ-QVIRAAENFRFFADKCEE 115
Query: 60 KIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 119
+ G T P D + T+ P+G G I PWN P ++ WK+ PALA GNT+VLK AE +
Sbjct: 116 AMDGRTYPVDTHLNY-TVRVPVGPVGLITPWNAPFMLSTWKIAPALAFGNTVVLKPAEWS 174
Query: 120 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 179
PL+A ++++ EAGLP GV N+V G+G AG AL +H +V ++FTG T TG I+++
Sbjct: 175 PLTAARLAEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNG 234
Query: 180 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239
A + LK ++ELGGKSP IV +DAD+++A + + +F G+ C A SR V ES+ +
Sbjct: 235 ADT-LKRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAED 293
Query: 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA- 298
FVEK VG P + GP I E K+L Y+ + GA + GGER
Sbjct: 294 FVEKLVERVRAIRVGHPLDPETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTF 353
Query: 299 ------KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAG 352
+G Y+ PTVFTG + M IA++EIFGPV +++ +KD +E I+++N ++YGLA
Sbjct: 354 RGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFKDEEEAIEKANDTRYGLAGY 413
Query: 353 VFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKA 412
V+T+++ A+ + AL G +W+N +V PFGG K SG GRE G+YS Y + K
Sbjct: 414 VWTNDVGRAHRVALALEAGMIWVNSQNVRHLPTPFGGVKASGIGREGGTYSFDFYTETKN 473
Query: 413 VVTALKNP 420
V AL
Sbjct: 474 VALALGPH 481
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. Length = 488 |
| >gnl|CDD|188167 TIGR01780, SSADH, succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 365 bits (938), Expect = e-123
Identities = 166/412 (40%), Positives = 250/412 (60%), Gaps = 4/412 (0%)
Query: 2 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 61
TA ERS ++ ++ +L+ + D++A L T +NGKP ++ A+ E+ ++A A ++
Sbjct: 39 TAKERSSLLRKWYNLMMENKDDLARLITLENGKPLKE-AKGEILYAASFLEWFAEEAKRV 97
Query: 62 QGLTAPADGPYH-VQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
G T P+ + + +P+GV I PWNFP M K G ALA G T+V+K AEQTP
Sbjct: 98 YGDTIPSPQSDKRLIVIKQPVGVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTP 157
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSG-YGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 179
LSAL +++L +AG+P GVLN+++G G L + V K++FTGST GKI+++ +
Sbjct: 158 LSALALARLAEQAGIPKGVLNVITGSRAKEVGNVLTTSPLVRKISFTGSTNVGKILMKQS 217
Query: 180 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239
A + +K V++ELGG +PFIV +DAD+D+A E A + F N GQ C +R +VH+ +YD+
Sbjct: 218 AST-VKKVSMELGGNAPFIVFDDADLDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDE 276
Query: 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAK 299
F +K K VG+ G+ QGP I+ + EK+ K+I V+ GAK+ TGG+R
Sbjct: 277 FAKKLAEAVKKLKVGNGLDEGVTQGPLINEKAVEKVEKHIADAVEKGAKVVTGGKRHELG 336
Query: 300 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLD 359
G + +PTV + V DML++K+E FGP+ + K+ D +EVI +N ++ GLAA F+ +L
Sbjct: 337 GNFFEPTVLSNVTADMLVSKEETFGPLAPVFKFDDEEEVIAIANDTEVGLAAYFFSRDLS 396
Query: 360 TANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVK 411
+ AL G V IN + + PFGG KQSG GRE Y + YL+ K
Sbjct: 397 RIWRVAEALEYGMVGINTGLISNVVAPFGGVKQSGLGREGSKYGIEEYLETK 448
|
Succinic semialdehyde dehydrogenase is one of three enzymes constituting 4-aminobutyrate (GABA) degradation in both prokaryotes and eukaryotes, catalyzing the (NAD(P)+)-dependent catabolism reaction of succinic semialdehyde to succinate for metabolism by the citric acid cycle. The EC number depends on the cofactor: 1.2.1.24 for NAD only, 1.2.1.79 for NADP only, and 1.2.1.16 if both can be used. In Escherichia coli, succinic semialdehyde dehydrogenase is located in an unidirectionally transcribed gene cluster encoding enzymes for GABA degradation and is suggested to be cotranscribed with succinic semialdehyde transaminase from a common promoter upstream of SSADH. Similar gene arrangements can be found in characterized Ralstonia eutropha and the genome analysis of Bacillus subtilis. Prokaryotic succinic semialdehyde dehydrogenases (1.2.1.16) share high sequence homology to characterized succinic semialdehyde dehydrogenases from rat and human (1.2.1.24), exhibiting conservation of proposed cofactor binding residues, and putative active sites (G-237 & G-242, C-293 & G-259 respectively of rat SSADH). Eukaryotic SSADH enzymes exclusively utilize NAD+ as a cofactor, exhibiting little to no NADP+ activity. While a NADP+ preference has been detected in prokaryotes in addition to both NADP+- and NAD+-dependencies as in E.coli, Pseudomonas, and Klebsiella pneumoniae. The function of this alternative SSADH currently is unknown, but has been suggested to play a possible role in 4-hydroxyphenylacetic degradation. Just outside the scope of this model, are several sequences belonging to clades scoring between trusted and noise. These sequences may be actual SSADH enzymes, but lack sufficiently close characterized homologs to make a definitive assignment at this time. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070) [Central intermediary metabolism, Other]. Length = 448 |
| >gnl|CDD|143468 cd07150, ALDH_VaniDH_like, Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Score = 362 bits (932), Expect = e-122
Identities = 169/414 (40%), Positives = 243/414 (58%), Gaps = 7/414 (1%)
Query: 2 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 61
T ER +I+L+ A+++ER D++ L + G + A E T L R AG ++
Sbjct: 41 TPSERERILLKAAEIMERRADDLIDLLIDEGGSTY-GKAWFETTFTPELLRAAAGECRRV 99
Query: 62 QGLTAPADGPYHVQ-TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
+G T P+D P V ++ P+GV I P+N+PL++ KV ALA GNT+VLK +E+TP
Sbjct: 100 RGETLPSDSPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETP 159
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
+ L +++++ EAGLP GV N+V+G G G L V + FTGST G+ + + A
Sbjct: 160 VIGLKIAEIMEEAGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAG 219
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
+ +LK +TLELGGK+P IV DAD+D A A + F +QGQ C + SR V E VYD+F
Sbjct: 220 R-HLKKITLELGGKNPLIVLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEF 278
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 300
V+K A A K VGDP GP I Q E+I + + V GAKL TGG+ G
Sbjct: 279 VKKFVARASKLKVGDPRDPDTVIGPLISPRQVERIKRQVEDAVAKGAKLLTGGKYDGN-- 336
Query: 301 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 360
+ +PTV T V DM I ++E FGPV S++ KD +E ++ +N ++YGL+A + T++L
Sbjct: 337 -FYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDLQR 395
Query: 361 ANTLMRALRVGSVWINCFDVFDAA-IPFGGYKQSGQGREKGSYSLSNYLQVKAV 413
A L L G V IN + D A +PFGG K SG GRE G +S+ + ++K +
Sbjct: 396 AFKLAERLESGMVHINDPTILDEAHVPFGGVKASGFGREGGEWSMEEFTELKWI 449
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. Length = 451 |
| >gnl|CDD|215157 PLN02278, PLN02278, succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 364 bits (936), Expect = e-122
Identities = 174/413 (42%), Positives = 247/413 (59%), Gaps = 3/413 (0%)
Query: 2 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 61
TA ERSKI+ R+ DL+ + +++A L T + GKP + A EV Y+A A ++
Sbjct: 82 TASERSKILRRWYDLIIANKEDLAQLMTLEQGKPL-KEAIGEVAYGASFLEYFAEEAKRV 140
Query: 62 QG-LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
G + + L +P+GV G I PWNFPL M KVGPALA G T+V+K +E TP
Sbjct: 141 YGDIIPSPFPDRRLLVLKQPVGVVGAITPWNFPLAMITRKVGPALAAGCTVVVKPSELTP 200
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
L+AL ++L +AG+PPGVLN+V G P G AL + +V K+ FTGST GK ++ AA
Sbjct: 201 LTALAAAELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLMAGAA 260
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
+ +K V+LELGG +PFIV +DAD+D A + A + F N GQ C +R V E +YD+F
Sbjct: 261 AT-VKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKF 319
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 300
E + K VVGD F+ G+ QGP I+ +K+ +++ V GAK+ GG+R G
Sbjct: 320 AEAFSKAVQKLVVGDGFEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSLGG 379
Query: 301 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 360
+ +PTV V +DMLI ++E+FGPV + ++K +E I +N ++ GLAA +FT +L
Sbjct: 380 TFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFKTEEEAIAIANDTEAGLAAYIFTRDLQR 439
Query: 361 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 413
A + AL G V +N + PFGG KQSG GRE Y + YL++K V
Sbjct: 440 AWRVSEALEYGIVGVNEGLISTEVAPFGGVKQSGLGREGSKYGIDEYLEIKYV 492
|
Length = 498 |
| >gnl|CDD|143463 cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 357 bits (918), Expect = e-120
Identities = 173/422 (40%), Positives = 253/422 (59%), Gaps = 14/422 (3%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
+ AY+R KI+++ A+L+ER +E+A L T + GKP +QS + EV T RLF+ A A
Sbjct: 40 LPAYKRYKILMKVAELIERRKEELAKLLTIEVGKPIKQS-RVEVERTIRLFKLAAEEAKV 98
Query: 61 IQGLTAPADG-PYH----VQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKT 115
++G T P D Y+ T+ EPIGV G I P+NFP +FA K+ PA+A GN++V+K
Sbjct: 99 LRGETIPVDAYEYNERRIAFTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKP 158
Query: 116 AEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 175
+ TPL+A+ ++K+L EAGLPPGV+N+V+GYG G + ++ +V+ ++FTGST G
Sbjct: 159 SSNTPLTAIELAKILEEAGLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVG--- 215
Query: 176 LQLAAK--SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVH 233
L +A+K K V LELGG P IV +DAD+++A +A F N GQ C A R V
Sbjct: 216 LLIASKAGGTGKKVALELGGSDPMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVE 275
Query: 234 ESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGG 293
E VYD+F++ K VGDP GP I E E++ + V+ G K+ GG
Sbjct: 276 EEVYDKFLKLLVEKVKKLKVGDPLDESTDLGPLISPEAVERMENLVNDAVEKGGKILYGG 335
Query: 294 ERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGV 353
+R G + PTV DM++ K+E+FGPV I K KD +E ++ +N+++YGL A V
Sbjct: 336 KRDE--GSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASV 393
Query: 354 FTHNLDTANTLMRALRVGSVWINCFDVFDA-AIPFGGYKQSGQGREKGSYSLSNYLQVKA 412
FT++++ A + R L G V IN F +PFGG+K+SG GRE Y++ + K
Sbjct: 394 FTNDINRALKVARELEAGGVVINDSTRFRWDNLPFGGFKKSGIGREGVRYTMLEMTEEKT 453
Query: 413 VV 414
+V
Sbjct: 454 IV 455
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. Length = 456 |
| >gnl|CDD|143442 cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Score = 358 bits (922), Expect = e-120
Identities = 164/419 (39%), Positives = 231/419 (55%), Gaps = 12/419 (2%)
Query: 5 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 64
ER++++LR A LL R E+AA + GK + + A +V YYA +++G
Sbjct: 92 ERARLLLRAAALLRRRRFELAAWMVLEVGKNWAE-ADADVAEAIDFLEYYAREMLRLRGF 150
Query: 65 TAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 124
+ ++ P+GV I PWNFPL + A AL GNT+VLK AE TP+ A
Sbjct: 151 PVEMVPGEDNRYVYRPLGVGAVISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIAA 210
Query: 125 YVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK--- 181
+ ++L EAGLPPGV+N + G G G L H +V +AFTGS G + + AAK
Sbjct: 211 KLVEILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAKVQP 270
Query: 182 --SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239
LK V E+GGK+ IV EDAD+D+AAE + F QGQ C A SR VHESVYD+
Sbjct: 271 GQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHESVYDE 330
Query: 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-- 297
F+E+ VGDP + GP ID ++I +YI G G +L GGE L
Sbjct: 331 FLERLVERTKALKVGDPEDPEVYMGPVIDKGARDRIRRYIEIGKSEG-RLLLGGEVLELA 389
Query: 298 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN 357
A+GY+++PT+F V D +A++EIFGPV +++K KD DE ++ +N ++YGL GVF+ +
Sbjct: 390 AEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAKDFDEALEIANDTEYGLTGGVFSRS 449
Query: 358 LDTANTLMRALRVGSVWIN--CFDVFDAAIPFGGYKQSGQG-REKGSYSLSNYLQVKAV 413
+ R VG+++ N PFGG+K SG G + G L ++Q K V
Sbjct: 450 PEHLERARREFEVGNLYANRKITGALVGRQPFGGFKMSGTGSKAGGPDYLLQFMQPKTV 508
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. Length = 512 |
| >gnl|CDD|143449 cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Score = 355 bits (914), Expect = e-119
Identities = 176/420 (41%), Positives = 257/420 (61%), Gaps = 9/420 (2%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
+ A R++ + R A+LL++ +E+A L T + GKP + + +V + +Y AG +
Sbjct: 56 VPAPRRAEYLFRAAELLKKRKEELARLVTREMGKPLAE-GRGDVQEAIDMAQYAAGEGRR 114
Query: 61 IQGLTAPADGPYHVQ-TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 119
+ G T P++ P T +PIGV I PWNFP+ + +WK+ PAL CGNT+V K AE T
Sbjct: 115 LFGETVPSELPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIFPALVCGNTVVFKPAEDT 174
Query: 120 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 179
P AL + +L EAGLPPGV+N+V G G G AL H +VD ++FTGST G+ + +
Sbjct: 175 PACALKLVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETC 234
Query: 180 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239
A+ N K V LE+GGK+P IV +DAD+D A E A ++ F GQ C A SR VHESVYD+
Sbjct: 235 ARPN-KRVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDE 293
Query: 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL--- 296
F+++ A + VGD GP I+ Q EK+L Y G + GA L GGERL
Sbjct: 294 FLKRFVERAKRLRVGDGLDEETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGG 353
Query: 297 -GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFT 355
KGY+++PTVFT V DM IA++EIFGPV ++++ L+E I+ +N ++YGL++ ++T
Sbjct: 354 GYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSLEEAIEIANDTEYGLSSAIYT 413
Query: 356 HNLDTANTLMRALRVGSVWINCFDV-FDAAIPFGGYKQSGQG-REKGSYSLSNYLQVKAV 413
+++ A R L G ++N + + +PFGG K+SG G RE G+ +L + + KAV
Sbjct: 414 EDVNKAFRARRDLEAGITYVNAPTIGAEVHLPFGGVKKSGNGHREAGTTALDAFTEWKAV 473
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. Length = 478 |
| >gnl|CDD|143418 cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Score = 352 bits (905), Expect = e-118
Identities = 156/420 (37%), Positives = 213/420 (50%), Gaps = 21/420 (5%)
Query: 5 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 64
ER+ ++ + ADLL DE+A L T + GKP + A+ EV + RYYA + +
Sbjct: 22 ERAALLRKLADLLRERKDELARLITLEMGKPIAE-ARAEVEKCAWICRYYA---ENAEAF 77
Query: 65 TAP----ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV----GPALACGNTIVLKTA 116
A D +EP+GV I+PWNFP W+V P L GNT++LK A
Sbjct: 78 LADEPIETDAG-KAYVRYEPLGVVLGIMPWNFPF----WQVFRFAAPNLMAGNTVLLKHA 132
Query: 117 EQTPLSALYVSKLLHEAGLPPGVL-NIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 175
P AL + +L EAG P GV N++ A+ + V + TGS G+ V
Sbjct: 133 SNVPGCALAIEELFREAGFPEGVFQNLLIDSDQVE--AIIADPRVRGVTLTGSERAGRAV 190
Query: 176 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES 235
A K NLK LELGG PFIV +DAD+DKA + A N GQ C A R VHE
Sbjct: 191 AAEAGK-NLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRLQNAGQSCIAAKRFIVHED 249
Query: 236 VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER 295
VYD+F+EK VGDP GP + +++ + + V GA L GG+R
Sbjct: 250 VYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVAAGATLLLGGKR 309
Query: 296 LGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFT 355
G + PTV T V M +E+FGPV +++K KD +E I +N S +GL VFT
Sbjct: 310 PDGPGAFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEEAIALANDSPFGLGGSVFT 369
Query: 356 HNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 415
+L+ A + R L G V+IN D +PFGG K+SG GRE G + + ++ +K V
Sbjct: 370 TDLERAERVARRLEAGMVFINGMVKSDPRLPFGGVKRSGYGRELGRFGIREFVNIKTVWV 429
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. Length = 429 |
| >gnl|CDD|143417 cd07099, ALDH_DDALDH, Methylomonas sp | Back alignment and domain information |
|---|
Score = 349 bits (898), Expect = e-117
Identities = 164/417 (39%), Positives = 225/417 (53%), Gaps = 10/417 (2%)
Query: 5 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI--- 61
R++ +LR+ L H DE+A L + GKP A EV + + A A ++
Sbjct: 41 GRAQRLLRWKRALADHADELAELLHAETGKPRA-DAGLEVLLALEAIDWAARNAPRVLAP 99
Query: 62 QGLTAPADGPYHVQTL-HEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
+ + P T+ + P GV G I PWN+PLL + PALA GN +VLK +E TP
Sbjct: 100 RKVPTGLLMPNKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTP 159
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
L +++ AG P GVL +V+G G T GAAL VDK+AFTGS TG+ V+ AA
Sbjct: 160 LVGELLAEAWAAAGPPQGVLQVVTGDGAT-GAALIDA-GVDKVAFTGSVATGRKVMAAAA 217
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
+ L PV LELGGK P IV DAD+++AA A + N GQ C + R +VHESVYD+F
Sbjct: 218 E-RLIPVVLELGGKDPMIVLADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEF 276
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 300
V + A A G G GP + Q + + +++ V GAK TGG R G
Sbjct: 277 VARLVAKARALRPGADDIGDADIGPMTTARQLDIVRRHVDDAVAKGAKALTGGARSNGGG 336
Query: 301 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 360
+ +PTV T V DM + ++E FGPV ++ D DE I +N S+YGL+A VF+ +L
Sbjct: 337 PFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIALANDSRYGLSASVFSRDLAR 396
Query: 361 ANTLMRALRVGSVWINCFDVFDA--AIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 415
A + R L G+V IN + A+PFGG K SG GR G+ L + + KA+
Sbjct: 397 AEAIARRLEAGAVSINDVLLTAGIPALPFGGVKDSGGGRRHGAEGLREFCRPKAIAR 453
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. Length = 453 |
| >gnl|CDD|132260 TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 343 bits (881), Expect = e-114
Identities = 161/425 (37%), Positives = 231/425 (54%), Gaps = 15/425 (3%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
MT ER+ ++ AD +ER D+ A E D GKP ++ ++P FR +A
Sbjct: 56 MTVAERADLLYAVADEIERRFDDFLAAEVADTGKPRSLASHLDIPRGAANFRVFADVVKN 115
Query: 61 IQG----LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 116
+ P + +P+GV G I PWN PLL+ WKVGPALACGNT+V+K +
Sbjct: 116 APTECFEMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMTWKVGPALACGNTVVVKPS 175
Query: 117 EQTPLSALYVSKLLHEAGLPPGVLNIVSGYGP-TAGAALASHMEVDKLAFTGSTTTGKIV 175
E+TP +A + ++++ G+P GV N+V G+GP +AG L H VD + FTG T TG +
Sbjct: 176 EETPGTATLLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAI 235
Query: 176 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES 235
++ AA +KPV+ ELGGK+ IV D D D A + F N GQ C R +V
Sbjct: 236 MKAAADG-VKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERP 294
Query: 236 VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGG-- 293
++D+FV A A +G P GP I +E +K+L Y V+ GA + TGG
Sbjct: 295 IFDRFVAALKARAESLKIGVPDDPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGV 354
Query: 294 -----ERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYG 348
A G +++PT++TG+ D + +EIFGP I + +EVI +N + YG
Sbjct: 355 PDFGDAL--AGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPFDSEEEVIALANDTPYG 412
Query: 349 LAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYL 408
LAA V+T +L A+ + R + VG VW+N + + D PFGG K SG GRE G +SL Y
Sbjct: 413 LAASVWTEDLSRAHRVARQMEVGIVWVNSWFLRDLRTPFGGSKLSGIGREGGVHSLEFYT 472
Query: 409 QVKAV 413
++ V
Sbjct: 473 ELTNV 477
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation [Energy metabolism, Other]. Length = 481 |
| >gnl|CDD|143423 cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Score = 335 bits (862), Expect = e-112
Identities = 157/419 (37%), Positives = 225/419 (53%), Gaps = 13/419 (3%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
ER I+L+ ADLLE DE + G A V + + R A +
Sbjct: 19 TPPSERRDILLKAADLLESRRDEFIEAMMEETGAT-AAWAGFNVDLAAGMLREAASLITQ 77
Query: 61 IQGLTAPADGPYHVQ-TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 119
I G + P+D P + + EP+GV I PWN P+++ + LA GNT+VLK +E +
Sbjct: 78 IIGGSIPSDKPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELS 137
Query: 120 PLSALYVSKLLHEAGLPPGVLNIVSGY---GPTAGAALASHMEVDKLAFTGSTTTGKIVL 176
P + + ++ HEAGLP GVLN+V+ P AL +H V K+ FTGST G+I+
Sbjct: 138 PRTHWLIGRVFHEAGLPKGVLNVVTHSPEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIA 197
Query: 177 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 236
+ AAK +LKPV LELGGK+P IV EDAD+D AA A + F N GQ C + R VHES+
Sbjct: 198 ETAAK-HLKPVLLELGGKAPAIVLEDADLDAAANAALFGAFLNSGQICMSTERIIVHESI 256
Query: 237 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGG-ER 295
D+FVEK +K F G + G + + +++ + + + GAKL GG
Sbjct: 257 ADEFVEK-----LKAAAEKLFAGPVVLGSLVSAAAADRVKELVDDALSKGAKLVVGGLAD 311
Query: 296 LGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFT 355
G + PT+ V DM I +E FGPV SI++ KD +E ++ +N S+YGL+A VFT
Sbjct: 312 ESPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFT 371
Query: 356 HNLDTANTLMRALRVGSVWINCFDVFD-AAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 413
+L A + + + G+V IN V D +P GG K SG GR G + + + + K +
Sbjct: 372 RDLARALAVAKRIESGAVHINGMTVHDEPTLPHGGVKSSGYGRFNGKWGIDEFTETKWI 430
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. Length = 432 |
| >gnl|CDD|143464 cd07146, ALDH_PhpJ, Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Score = 330 bits (849), Expect = e-110
Identities = 163/421 (38%), Positives = 228/421 (54%), Gaps = 14/421 (3%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
+T Y+RS I+ + A LLE +E A L T ++G + + EV + R+ A A +
Sbjct: 37 LTRYQRSAILNKAAALLEARREEFARLITLESGLCL-KDTRYEVGRAADVLRFAAAEALR 95
Query: 61 IQGLTAPAD-----GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKT 115
G + D + TL EP+GV I P+N PL A K+ PA+A N IVLK
Sbjct: 96 DDGESFSCDLTANGKARKIFTLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKP 155
Query: 116 AEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 175
+E+TPLSA+Y++ LL+EAGLPP +L++V+G G L +H +VD + FTG GK +
Sbjct: 156 SEKTPLSAIYLADLLYEAGLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAI 215
Query: 176 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES 235
AA + K LELGG P IV +DAD+++AA LA + N GQ C A R VHES
Sbjct: 216 ---AATAGYKRQLLELGGNDPLIVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHES 272
Query: 236 VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER 295
V D+FV+ + VVGDP G ID E +I + + GA++ G +R
Sbjct: 273 VADEFVDLLVEKSAALVVGDPMDPATDMGTVIDEEAAIQIENRVEEAIAQGARVLLGNQR 332
Query: 296 LGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFT 355
GA PTV V D + +E FGPV +++ KDLDE I SN++ YGL++GV T
Sbjct: 333 QGA---LYAPTVLDHVPPDAELVTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCT 389
Query: 356 HNLDTANTLMRALRVGSVWINCFDVFDAA-IPFGGYKQSGQG-REKGSYSLSNYLQVKAV 413
++LDT L+ L VG+V +N F + PFGG K SG G +E ++ VK
Sbjct: 390 NDLDTIKRLVERLDVGTVNVNEVPGFRSELSPFGGVKDSGLGGKEGVREAMKEMTNVKTY 449
Query: 414 V 414
Sbjct: 450 S 450
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. Length = 451 |
| >gnl|CDD|143405 cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 329 bits (847), Expect = e-109
Identities = 148/424 (34%), Positives = 216/424 (50%), Gaps = 15/424 (3%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
+ A R +I+ + + L + + + L + + GK EV + Y G +
Sbjct: 54 VPAPRRGEIVRQIGEALRKKKEALGRLVSLEMGKIL-PEGLGEVQEMIDICDYAVGLSRM 112
Query: 61 IQGLTAPADGPYHVQ-TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 119
+ GLT P++ P H P+GV G I +NFP+ + W AL CGNT+V K +E T
Sbjct: 113 LYGLTIPSERPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAIALVCGNTVVWKPSETT 172
Query: 120 PLSALYVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 175
PL+A+ V+K+L E GLPPGV+N+V+G G G L V ++FTGST G+ V
Sbjct: 173 PLTAIAVTKILAEVLEKNGLPPGVVNLVTGGGD-GGELLVHDPRVPLVSFTGSTEVGRRV 231
Query: 176 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES 235
+ A+ V LELGG + IV +DAD+D A +A GQ C R VHES
Sbjct: 232 GETVARRF-GRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHES 290
Query: 236 VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER 295
VYD+F+E+ + +GDP G GP I+ EK L I G + TGG+R
Sbjct: 291 VYDEFLERLVKAYKQVRIGDPLDEGTLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKR 350
Query: 296 L--GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGV 353
+ G G Y++PT+ TGV DD I ++E F P+ ++K+ L+E I +N GL++ +
Sbjct: 351 IDGGEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEAIAINNDVPQGLSSSI 410
Query: 354 FTHNLDTANTLMRALRV--GSVWINCFDVFDAAI--PFGGYKQSGQGREKGSYSLSNYLQ 409
FT +L A + G V +N A I FGG K++G GRE GS + Y++
Sbjct: 411 FTEDLREAFRWLGPKGSDCGIVNVN-IPTSGAEIGGAFGGEKETGGGRESGSDAWKQYMR 469
Query: 410 VKAV 413
Sbjct: 470 RSTC 473
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). Length = 478 |
| >gnl|CDD|143438 cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Score = 328 bits (842), Expect = e-109
Identities = 150/415 (36%), Positives = 227/415 (54%), Gaps = 10/415 (2%)
Query: 6 RSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT 65
R++++L AD E + + +A L +NGK + A+ E+ RYYAG A G
Sbjct: 44 RARVLLELADAFEANAERLARLLALENGKILGE-ARFEISGAISELRYYAGLARTEAGRM 102
Query: 66 A-PADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 124
P G + + L EP+GVAG I+PWN P+++ + PALA G T+V+K A QT
Sbjct: 103 IEPEPGSFSL-VLREPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQINA 161
Query: 125 YVSKLLHEA-GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 183
+ ++L E LP GV+N+ + G A L + +VD ++FTGST TG+ + AA
Sbjct: 162 AIIRILAEIPSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGR-AIMAAAAPT 220
Query: 184 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 243
LK + LELGGK+P IV +DAD+D A AL GQ C AGSR V S+ D+ ++
Sbjct: 221 LKRLGLELGGKTPCIVFDDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDR 280
Query: 244 -ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG---AK 299
A LA +V G GP ID +++ + + + GA++ G + AK
Sbjct: 281 LAARLAAVKV-GPGLDPASDMGPLIDRANVDRVDRMVERAIAAGAEVVLRGGPVTEGLAK 339
Query: 300 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLD 359
G +++PT+ D I ++EIFGPV ++ + D E + +N + YGLAA V+T +L
Sbjct: 340 GAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDEAEAVALANDTDYGLAASVWTRDLA 399
Query: 360 TANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 414
A + RA+R G+VWIN ++ A GGY+QSG GR G +L ++++ K +
Sbjct: 400 RAMRVARAIRAGTVWINDWNKLFAEAEEGGYRQSGLGRLHGVAALEDFIEYKHIY 454
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. Length = 455 |
| >gnl|CDD|143413 cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Score = 327 bits (841), Expect = e-109
Identities = 167/420 (39%), Positives = 234/420 (55%), Gaps = 13/420 (3%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
+ +ER I+ R ADLL++ +E A + + GKP + A+ EV R A A++
Sbjct: 40 LPPHERMAILERAADLLKKRAEEFAKIIACEGGKPIKD-ARVEVDRAIDTLRLAAEEAER 98
Query: 61 IQGLTAPADGPYHVQ-----TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKT 115
I+G P D T+ EP+GV I P+NFPL + A K+ PA+A G +VLK
Sbjct: 99 IRGEEIPLDATQGSDNRLAWTIREPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKP 158
Query: 116 AEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 175
A +TPLSAL ++K+L EAG+P GVL +V+G G A A+ V L+FTGS G+
Sbjct: 159 ASKTPLSALELAKILVEAGVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGE-- 216
Query: 176 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES 235
L A + K + LELGG +P IV DAD+D A E F++ GQ C + R +VHE
Sbjct: 217 -ALRANAGGKRIALELGGNAPVIVDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEE 275
Query: 236 VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER 295
+YD+F+E A K VGDP GP I E E++ +++ V+ GA+L GGER
Sbjct: 276 LYDEFIEAFVAAVKKLKVGDPLDEDTDVGPLISEEAAERVERWVEEAVEAGARLLCGGER 335
Query: 296 LGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFT 355
GA KPTV V D ++ +E FGPV I++Y D +E I+ +N++ YGL AG+FT
Sbjct: 336 DGA---LFKPTVLEDVPRDTKLSTEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIFT 392
Query: 356 HNLDTANTLMRALRVGSVWINCFDVFDA-AIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 414
+L+ A L VG V +N F +PFGG K+SG GRE Y++ + K VV
Sbjct: 393 RDLNVAFKAAEKLEVGGVMVNDSSAFRTDWMPFGGVKESGVGREGVPYAMEEMTEEKTVV 452
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. Length = 453 |
| >gnl|CDD|143469 cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 325 bits (836), Expect = e-108
Identities = 166/418 (39%), Positives = 230/418 (55%), Gaps = 12/418 (2%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
ER++I+ + A +LE DEI ++G + A E + R A + +
Sbjct: 51 TLPQERAEILEKAAQILEERRDEIVEWLIRESGSTRIK-ANIEWGAAMAITREAATFPLR 109
Query: 61 IQGLTAPADGP---YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAE 117
++G P+D P V EP+GV G I PWNFPL + V PALA GN +VLK A
Sbjct: 110 MEGRILPSDVPGKENRV--YREPLGVVGVISPWNFPLHLSMRSVAPALALGNAVVLKPAS 167
Query: 118 QTPLSA-LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 176
TP++ L ++K+ EAGLP GVLN+V G G G A H ++FTGST G+ +
Sbjct: 168 DTPITGGLLLAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIG 227
Query: 177 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 236
+LA + +LK V LELGG +PF+V EDAD+D A A + F +QGQ C A +R VHE V
Sbjct: 228 ELAGR-HLKKVALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDV 286
Query: 237 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 296
YD+FVEK GDP GP I+ Q + +L I V+ GA L GGE
Sbjct: 287 YDEFVEKFVERVKALPYGDPSDPDTVVGPLINESQVDGLLDKIEQAVEEGATLLVGGE-- 344
Query: 297 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH 356
A+G ++PTV + V +DM IA++EIFGPV I+K D +E ++ +N ++YGL+ VFT
Sbjct: 345 -AEGNVLEPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTEYGLSGAVFTS 403
Query: 357 NLDTANTLMRALRVGSVWINCFDVFDAA-IPFGGYKQSGQGREKGSYSLSNYLQVKAV 413
+L+ R + G IN V D +PFGG K SG GR G ++L + K +
Sbjct: 404 DLERGVQFARRIDAGMTHINDQPVNDEPHVPFGGEKNSGLGRFNGEWALEEFTTDKWI 461
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. Length = 465 |
| >gnl|CDD|182233 PRK10090, PRK10090, aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Score = 323 bits (831), Expect = e-108
Identities = 149/396 (37%), Positives = 226/396 (57%), Gaps = 8/396 (2%)
Query: 22 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGP-YHVQTLHEP 80
EI+AL + GK +Q A+ EV T Y A WA + +G +D P ++
Sbjct: 13 SEISALIVEEGGKI-QQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRA 71
Query: 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVL 140
+GV I+PWNFP + A K+ PAL GNTIV+K +E TP +A+ +K++ E GLP GV
Sbjct: 72 LGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPKGVF 131
Query: 141 NIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC 200
N+V G G T G LA + +V ++ TGS + G+ ++ AAK N+ V LELGGK+P IV
Sbjct: 132 NLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMAAAAK-NITKVCLELGGKAPAIVM 190
Query: 201 EDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV-VGDPFKG 259
+DAD+D A + + N GQ C R +V + +YDQFV + AM+ V G+P +
Sbjct: 191 DDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGE-AMQAVQFGNPAER 249
Query: 260 G-IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIA 318
I GP I++ E++ + + V+ GA++ GG+ + KGYY PT+ V+ +M I
Sbjct: 250 NDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEMSIM 309
Query: 319 KDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCF 378
+E FGPV ++ + L+E I +N S YGL + ++T NL+ A ++ L+ G +IN
Sbjct: 310 HEETFGPVLPVVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYIN-R 368
Query: 379 DVFDAAIPF-GGYKQSGQGREKGSYSLSNYLQVKAV 413
+ F+A F G+++SG G G + L YLQ + V
Sbjct: 369 ENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVV 404
|
Length = 409 |
| >gnl|CDD|236501 PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 325 bits (836), Expect = e-107
Identities = 168/430 (39%), Positives = 232/430 (53%), Gaps = 35/430 (8%)
Query: 5 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTE---VPMTTRLFRYYAGWADKI 61
ER+ ++LRF DL+ + +E+ L + GK + A E V +T R YYA A K
Sbjct: 77 ERAAVLLRFHDLVLENREELLDLVQLETGKA-RRHAFEEVLDVALTAR---YYARRAPK- 131
Query: 62 QGLTAPAD--GPYHVQT----LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKT 115
L AP G V T L +P GV G I PWN+PL + PAL GN +VLK
Sbjct: 132 --LLAPRRRAGALPVLTKTTELRQPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKP 189
Query: 116 AEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 175
QTPL+AL +LL+EAGLP + +V+G GP G AL + D L FTGST TG+++
Sbjct: 190 DSQTPLTALAAVELLYEAGLPRDLWQVVTGPGPVVGTALVDN--ADYLMFTGSTATGRVL 247
Query: 176 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES 235
+ A L +LELGGK+P IV +DAD+DKAA A A F N GQ C + R +VHES
Sbjct: 248 AEQAG-RRLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHES 306
Query: 236 VYDQFVEK--ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGG 293
+YD+FV A AM+ +G + G I Q E + ++ V GA + GG
Sbjct: 307 IYDEFVRAFVAAVRAMR--LGAGYDYSADMGSLISEAQLETVSAHVDDAVAKGATVLAGG 364
Query: 294 ER---LGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLA 350
+ LG + +PTV TGV DM +A++E FGPV S+ D+DE ++R+N + YGL
Sbjct: 365 KARPDLGP--LFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDEAVERANDTPYGLN 422
Query: 351 AGVFTHNLDTANTLMRALRVGSVWINCFDVFDAA-----IPFGGYKQSGQGREKGSYSLS 405
A V+T + + +R G+V +N + + AA P GG K SG GR G+ L
Sbjct: 423 ASVWTGDTARGRAIAARIRAGTVNVN--EGYAAAWGSVDAPMGGMKDSGLGRRHGAEGLL 480
Query: 406 NYLQVKAVVT 415
Y + + + T
Sbjct: 481 KYTESQTIAT 490
|
Length = 524 |
| >gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 322 bits (827), Expect = e-107
Identities = 156/398 (39%), Positives = 213/398 (53%), Gaps = 8/398 (2%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
ER+ ++ R ADLLE H DEIA ++G A EV AG +
Sbjct: 32 TPPRERAAVLRRAADLLEEHADEIADWIVRESGS-IRPKAGFEVGAAIGELHEAAGLPTQ 90
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
QG P+ P+GV G I P+NFPL++ V PALA GN +VLK +TP
Sbjct: 91 PQGEILPSAPGRLSLARRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTP 150
Query: 121 LSALYV-SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 179
+S V ++L EAGLP GVL+++ G G AG AL V ++FTGST G+ V + A
Sbjct: 151 VSGGVVIARLFEEAGLPAGVLHVLPG-GADAGEALVEDPNVAMISFTGSTAVGRKVGEAA 209
Query: 180 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239
+ +LK V+LELGGK+ IV +DAD+D AA + F +QGQ C A R VHESV D
Sbjct: 210 GR-HLKKVSLELGGKNALIVLDDADLDLAASNGAWGAFLHQGQICMAAGRHLVHESVADA 268
Query: 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAK 299
+ K A A VGDP G + GP I++ Q +++ + V GA+LE GG
Sbjct: 269 YTAKLAAKAKHLPVGDPATGQVALGPLINARQLDRVHAIVDDSVAAGARLEAGGTY---D 325
Query: 300 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLD 359
G + +PTV +GVK M +EIFGPV + + +E + +N ++YGL+AG+ + ++
Sbjct: 326 GLFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSDEEAVALANDTEYGLSAGIISRDVG 385
Query: 360 TANTLMRALRVGSVWINCFDVFDAAI-PFGGYKQSGQG 396
A L LR G + IN V D PFGG SG G
Sbjct: 386 RAMALADRLRTGMLHINDQTVNDEPHNPFGGMGASGNG 423
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. Length = 443 |
| >gnl|CDD|143420 cd07102, ALDH_EDX86601, Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Score = 315 bits (809), Expect = e-104
Identities = 149/414 (35%), Positives = 203/414 (49%), Gaps = 9/414 (2%)
Query: 5 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK-IQG 63
ER I+ R +LL + DEIA TW G+P Q+ E+ RY A++ +
Sbjct: 41 ERKAIVTRAVELLAANTDEIAEELTWQMGRPIAQAGG-EIRGMLERARYMISIAEEALAD 99
Query: 64 LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 123
+ P + EP+GV I PWN+P L V PAL GN ++LK + QTPL
Sbjct: 100 IRVPEKDGFERYIRREPLGVVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPLCG 159
Query: 124 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 183
+ EAGLP GV ++ T AAL + +D ++FTGS G+ + Q AA
Sbjct: 160 ERFAAAFAEAGLPEGVFQVLHLSHET-SAALIADPRIDHVSFTGSVAGGRAI-QRAAAGR 217
Query: 184 LKPVTLELGGKSPFIVCEDADVDKAAE-LAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 242
V LELGGK P V DAD+D AAE L A FFN GQ CC+ R +VHES+YD FVE
Sbjct: 218 FIKVGLELGGKDPAYVRPDADLDAAAESLVDGA-FFNSGQSCCSIERIYVHESIYDAFVE 276
Query: 243 KANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL---GAK 299
A+ +GDP GP + + + + I + GA+ G A
Sbjct: 277 AFVAVVKGYKLGDPLDPSTTLGPVVSARAADFVRAQIADAIAKGARALIDGALFPEDKAG 336
Query: 300 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLD 359
G Y+ PTV T V M + ++E FGPV I+K K E I N S+YGL A V+T ++
Sbjct: 337 GAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKSDAEAIALMNDSEYGLTASVWTKDIA 396
Query: 360 TANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 413
A L L G+V++N D D A+ + G K SG+G + K+
Sbjct: 397 RAEALGEQLETGTVFMNRCDYLDPALAWTGVKDSGRGVTLSRLGYDQLTRPKSY 450
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. Length = 452 |
| >gnl|CDD|143419 cd07101, ALDH_SSADH2_GabD2, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Score = 314 bits (807), Expect = e-103
Identities = 163/435 (37%), Positives = 222/435 (51%), Gaps = 45/435 (10%)
Query: 5 ERSKIILRFADLLERHNDEIAALETWDNGK----PFEQSAQTEVPMTTRLFRYYAGWADK 60
ER+ + LRF DL+ DE+ L + GK FE+ V + R YYA A++
Sbjct: 41 ERAAVFLRFHDLVLERRDELLDLIQLETGKARRHAFEEVLD--VAIVAR---YYARRAER 95
Query: 61 ----------IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNT 110
I LT P GV G I PWN+PL + PAL GN
Sbjct: 96 LLKPRRRRGAIPVLT-------RTTVNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNA 148
Query: 111 IVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTT 170
+VLK QT L+AL+ +LL EAGLP + +V+G G G A+ + D + FTGST
Sbjct: 149 VVLKPDSQTALTALWAVELLIEAGLPRDLWQVVTGPGSEVGGAIVDN--ADYVMFTGSTA 206
Query: 171 TGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRT 230
TG++V + A L +LELGGK+P IV EDAD+DKAA A A F N GQ C + R
Sbjct: 207 TGRVVAERAG-RRLIGCSLELGGKNPMIVLEDADLDKAAAGAVRACFSNAGQLCVSIERI 265
Query: 231 FVHESVYDQFVEK--ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAK 288
+VHESVYD+FV + A A++ +G G G I Q +++ ++ V GA
Sbjct: 266 YVHESVYDEFVRRFVARTRALR--LGAALDYGPDMGSLISQAQLDRVTAHVDDAVAKGAT 323
Query: 289 LETGGER---LGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS 345
+ GG LG Y+ +PTV TGV +DM + +E FGPV SI + D DE I+ +N +
Sbjct: 324 VLAGGRARPDLGP--YFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIELANDT 381
Query: 346 QYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAA-----IPFGGYKQSGQGREKG 400
YGL A V+T + + LR G+V +N + + AA P GG K SG GR G
Sbjct: 382 DYGLNASVWTRDGARGRRIAARLRAGTVNVN--EGYAAAWASIDAPMGGMKDSGLGRRHG 439
Query: 401 SYSLSNYLQVKAVVT 415
+ L Y + + V
Sbjct: 440 AEGLLKYTETQTVAV 454
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). Length = 454 |
| >gnl|CDD|143401 cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Score = 314 bits (808), Expect = e-103
Identities = 156/426 (36%), Positives = 220/426 (51%), Gaps = 22/426 (5%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
M ER + +FADLL+ + +E+A L W+ GK + A EV T R +
Sbjct: 58 MPLEERIDCLHKFADLLKENKEEVANLLMWEIGKTL-KDALKEVDRTIDYIRDTIEELKR 116
Query: 61 IQGLTAPADGPYHVQTL-----HEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKT 115
+ G + P D + EP+GV I P+N+PL + K+ PAL GNT+V K
Sbjct: 117 LDGDSLPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNLTVSKLIPALIMGNTVVFKP 176
Query: 116 AEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 175
A Q L + +++ H+AG P GV+N+V+G G G L +H +D ++FTGST G +
Sbjct: 177 ATQGVLLGIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRL 236
Query: 176 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAA-ELAHYALFFNQGQCCCAGSRTFVHE 234
+ K + LELGGK P IV DAD++ AA E+ AL ++ GQ C A R VHE
Sbjct: 237 KKQHPM---KRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYS-GQRCTAIKRVLVHE 292
Query: 235 SVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGE 294
SV D+ VE K VG P+ G+ P ID + + + I V GA + GG
Sbjct: 293 SVADELVELLKEEVAKLKVGMPWDNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGG 352
Query: 295 RLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVF 354
R G G I PT+ V DM +A +E FGPV I++ D++E I+ +N S YGL A +F
Sbjct: 353 REG--GNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEAIELANKSNYGLQASIF 410
Query: 355 THNLDTANTLMRALRVGSVWINCF-----DVFDAAIPFGGYKQSGQGREKGSYSLSNYLQ 409
T +++ A L AL VG+V IN D F PF G K SG G + +L + +
Sbjct: 411 TKDINKARKLADALEVGTVNINSKCQRGPDHF----PFLGRKDSGIGTQGIGDALRSMTR 466
Query: 410 VKAVVT 415
K +V
Sbjct: 467 RKGIVI 472
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. Length = 473 |
| >gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 316 bits (811), Expect = e-103
Identities = 154/422 (36%), Positives = 217/422 (51%), Gaps = 20/422 (4%)
Query: 5 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYA----GWADK 60
+R++I+LR A ++ R E +A + GKP+ + A + YYA AD
Sbjct: 96 DRARILLRAAAIIRRRKHEFSAWLVKEAGKPWAE-ADADTAEAIDFLEYYARQMLKLADG 154
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
+ P + H + + P+GV I PWNFP + A A+ GNT++LK A TP
Sbjct: 155 KPVESRPGE---HNRYFYIPLGVGVVISPWNFPFAIMAGMTLAAIVAGNTVLLKPASDTP 211
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
+ A ++L EAGLP GV+N V G G G L H + + FTGS G + + AA
Sbjct: 212 VIAAKFVEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYERAA 271
Query: 181 KSN-----LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES 235
K LK V E+GGK +V EDAD+D AAE + F GQ C A SR VHE
Sbjct: 272 KVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHED 331
Query: 236 VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER 295
VYD+ +EK L + VG+P GP I+ F+KI+ YI G + G +L GGE
Sbjct: 332 VYDEVLEKVVELTKELTVGNPEDNA-YMGPVINQASFDKIMSYIEIGKEEG-RLVLGGEG 389
Query: 296 LGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFT 355
+KGY+I+PT+F V I ++EIFGPV + +K KD D ++ +N ++YGL V +
Sbjct: 390 DDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIKAKDFDHALEIANNTEYGLTGAVIS 449
Query: 356 HNLDTANTLMRALRVGSVWIN--CFDVFDAAIPFGGYKQSGQGREKGS--YSLSNYLQVK 411
+N + R VG+++ N C PFGG+ SG + G Y L +LQ K
Sbjct: 450 NNREHLEKARREFHVGNLYFNRGCTGAIVGYHPFGGFNMSGTDSKAGGPDY-LLLFLQAK 508
Query: 412 AV 413
V
Sbjct: 509 TV 510
|
Length = 514 |
| >gnl|CDD|183050 PRK11241, gabD, succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Score = 311 bits (797), Expect = e-102
Identities = 160/412 (38%), Positives = 239/412 (58%), Gaps = 3/412 (0%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
+TA ER+ I+ R+ +L+ H D++A L T + GKP + A+ E+ ++A +
Sbjct: 67 LTAKERANILRRWFNLMMEHQDDLARLMTLEQGKPLAE-AKGEISYAASFIEWFAEEGKR 125
Query: 61 IQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 119
I G T P + + +PIGV I PWNFP M K GPALA G T+VLK A QT
Sbjct: 126 IYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQT 185
Query: 120 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 179
P SAL +++L AG+P GV N+V+G G L S+ V KL+FTGST G+ +++
Sbjct: 186 PFSALALAELAIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQC 245
Query: 180 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239
AK ++K V+LELGG +PFIV +DAD+DKA E A + F N GQ C +R +V + VYD+
Sbjct: 246 AK-DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDR 304
Query: 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAK 299
F EK K +GD + G+ GP ID + K+ ++I ++ GA++ GG+
Sbjct: 305 FAEKLQQAVSKLHIGDGLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHELG 364
Query: 300 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLD 359
G + +PT+ V + +AK+E FGP+ + ++KD +VI ++N +++GLAA + +L
Sbjct: 365 GNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLS 424
Query: 360 TANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVK 411
+ AL G V IN + + PFGG K SG GRE Y + +YL++K
Sbjct: 425 RVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIK 476
|
Length = 482 |
| >gnl|CDD|132417 TIGR03374, ABALDH, 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Score = 303 bits (778), Expect = 4e-99
Identities = 157/418 (37%), Positives = 231/418 (55%), Gaps = 10/418 (2%)
Query: 2 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 61
T R++ +L+ AD++E + A LE+ + GKP E+P +FR++AG A +
Sbjct: 58 TPKARAECLLKLADVIEENAQVFAELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCL 117
Query: 62 QGLTAPADGPY---HVQTLH-EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAE 117
GL A G Y H + +P+GV I PWN+PL+M AWK+ PALA GN +VLK +E
Sbjct: 118 SGLAA---GEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSE 174
Query: 118 QTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 177
TPL+AL +++L + P GV+NI+ G G T G L H +V ++ TGS TG+ +L
Sbjct: 175 ITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILS 233
Query: 178 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 237
A S +K +ELGGK+P IV +DAD+D E F+N GQ C A R + +Y
Sbjct: 234 HTAPS-IKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIY 292
Query: 238 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI-RSGVDGGAKLETGGERL 296
D VEK A G P + GP E+++K + + G K+ TGGE+
Sbjct: 293 DTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKR 352
Query: 297 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH 356
GYY PT+ G K D I + E+FGPV SI + D ++V+ +N SQYGLA+ V+T
Sbjct: 353 KGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVNWANDSQYGLASSVWTK 412
Query: 357 NLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 414
++ A+ L L+ G W+N + + +P GG K SG G++ Y L +Y V+ ++
Sbjct: 413 DVGRAHRLSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHIM 470
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. Length = 472 |
| >gnl|CDD|143465 cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Score = 297 bits (763), Expect = 4e-97
Identities = 153/421 (36%), Positives = 211/421 (50%), Gaps = 16/421 (3%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
+ A+ R+ I+L LE +E+A + GKP + A+ EV FR A A +
Sbjct: 40 LPAHRRAAILLHCVARLEERFEELAETIVLEAGKPIKD-ARGEVARAIDTFRIAAEEATR 98
Query: 61 IQGLTAPADGP-----YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKT 115
I G P D PIG I P+NFPL + A KV PA+A G VLK
Sbjct: 99 IYGEVLPLDISARGEGRQGLVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLKP 158
Query: 116 AEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAA-LASHMEVDKLAFTGSTTTGKI 174
A +TPLSAL + ++L E GLP G +++ A L + + L+FTGS G
Sbjct: 159 ASRTPLSALILGEVLAETGLPKGAFSVLPC--SRDDADLLVTDERIKLLSFTGSPAVGWD 216
Query: 175 VLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHE 234
+ A K K V LELGG + IV DAD+D AA+ + F+ GQ C + R VH
Sbjct: 217 LKARAGK---KKVVLELGGNAAVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHR 273
Query: 235 SVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGE 294
SVYD+F + A GDP GP I + E++ ++ VD GAKL TGG+
Sbjct: 274 SVYDEFKSRLVARVKALKTGDPKDDATDVGPMISESEAERVEGWVNEAVDAGAKLLTGGK 333
Query: 295 RLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVF 354
R G ++PT+ V DM + +E+FGPV ++ Y D DE + N S++GL AGVF
Sbjct: 334 R---DGALLEPTILEDVPPDMEVNCEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVF 390
Query: 355 THNLDTANTLMRALRVGSVWINCFDVFDA-AIPFGGYKQSGQGREKGSYSLSNYLQVKAV 413
T +L+ A L VG V IN F +P+GG K SG GRE Y++ + + +
Sbjct: 391 TRDLEKALRAWDELEVGGVVINDVPTFRVDHMPYGGVKDSGIGREGVRYAIEEMTEPRLL 450
Query: 414 V 414
V
Sbjct: 451 V 451
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. Length = 452 |
| >gnl|CDD|212007 TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, Rv0768 family | Back alignment and domain information |
|---|
Score = 278 bits (714), Expect = 2e-89
Identities = 154/422 (36%), Positives = 223/422 (52%), Gaps = 13/422 (3%)
Query: 6 RSKIILRFADLLERHNDEIAALETWDNGKP--FEQSAQTEVPMTTRLFRYYAGWADKIQ- 62
R + + + D L H +E+ L + G P AQ E P+ + A A+
Sbjct: 62 RVRCLRQLRDALRAHVEELRELTIAEVGAPRMLTAGAQLEGPVDD--LGFAADLAESYAW 119
Query: 63 ----GLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 118
G+ +P P E +GV G I PWNFP + K+GPALA GNT+VLK A
Sbjct: 120 TTDLGVASPMGIPTRRTLRREAVGVVGAITPWNFPHQINLAKLGPALAAGNTVVLKPAPD 179
Query: 119 TPLSALYVSKLLHE-AGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 177
TP A + +L+ E PPGV+NIV+ GA LA VD ++FTGST TG+ V+
Sbjct: 180 TPWCAAVLGELIAEHTDFPPGVVNIVTSSDHRLGALLAKDPRVDMVSFTGSTATGRAVMA 239
Query: 178 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 237
AA + LK V LELGGKS FIV +DAD+ A +A + + + GQ C +R V + Y
Sbjct: 240 DAAAT-LKKVFLELGGKSAFIVLDDADLAAACSMAAFTVCMHAGQGCAITTRLVVPRARY 298
Query: 238 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 297
D+ V A A GDP G GP I + Q +++ Y+ V G + GG R
Sbjct: 299 DEAVAAAAATMGSIKPGDPADPGTVCGPVISARQRDRVQSYLDLAVAEGGRFACGGGRPA 358
Query: 298 --AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFT 355
+G++++PTV G+ ++ +A++EIFGPV +++ + D+ ++ +N S YGL+ VF
Sbjct: 359 DRDRGFFVEPTVIAGLDNNARVAREEIFGPVLTVIAHDGDDDAVRIANDSPYGLSGTVFG 418
Query: 356 HNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 415
+ + A + +R G+V +N + A PFGGYKQSG GRE G YL+ K + T
Sbjct: 419 ADPERAAAVAARVRTGTVNVNGGVWYSADAPFGGYKQSGIGREMGVAGFEEYLETKLIAT 478
Query: 416 AL 417
A
Sbjct: 479 AA 480
|
This family describes a branch of the aldehyde dehydrogenase (NAD) family (see pfam00171) that includes Rv0768 from Mycobacterium tuberculosis. All members of this family belong to species predicted to synthesize mycofactocin, suggesting that this enzyme or another upstream or downstream in the same pathway might be mycofactocin-dependent. However, the taxonomic range of this family is not nearly broad enough to make that relationship conclusive [Unknown function, Enzymes of unknown specificity]. Length = 480 |
| >gnl|CDD|143416 cd07098, ALDH_F15-22, Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Score = 274 bits (702), Expect = 7e-88
Identities = 140/438 (31%), Positives = 211/438 (48%), Gaps = 42/438 (9%)
Query: 5 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 64
ER K++ + + +EI + D GK ++ E+ + T +KI+
Sbjct: 41 ERRKVLRSLLKYILENQEEICRVACRDTGKTMVDASLGEI-LVT---------CEKIRWT 90
Query: 65 TA-------PADGPYHVQTLH-------EPIGVAGQIIPWNFPLLMFAWKVGPALACGNT 110
P P + + EP+GV G I+ WN+P + AL GN
Sbjct: 91 LKHGEKALRPESRPGGLLMFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNA 150
Query: 111 IVLKTAEQTPLSALY----VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFT 166
IV+K +EQ S+ + + + L G P ++ +V+ T AL SH +D + F
Sbjct: 151 IVVKVSEQVAWSSGFFLSIIRECLAACGHDPDLVQLVTCLPET-AEALTSHPVIDHITFI 209
Query: 167 GSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCA 226
GS GK V+ AA+S L PV LELGGK P IV +DAD+D+ A + F + GQ C
Sbjct: 210 GSPPVGKKVMAAAAES-LTPVVLELGGKDPAIVLDDADLDQIASIIMRGTFQSSGQNCIG 268
Query: 227 GSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG 286
R VHE +YD+ +E G P G + G I +F+++ + + V+ G
Sbjct: 269 IERVIVHEKIYDKLLEILTDRVQALRQGPPLDGDVDVGAMISPARFDRLEELVADAVEKG 328
Query: 287 AKLETGGER----LGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRS 342
A+L GG+R +G+Y PT+ V DM IA++E+FGPV ++K D +E ++ +
Sbjct: 329 ARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIA 388
Query: 343 NASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF--DAAIPFGGYKQSGQGR--- 397
N+++YGL A VF ++ A + L G V IN F V +PFGG K SG GR
Sbjct: 389 NSTEYGLGASVFGKDIKRARRIASQLETGMVAINDFGVNYYVQQLPFGGVKGSGFGRFAG 448
Query: 398 EKGSYSLSNYLQVKAVVT 415
E+G L N K+V
Sbjct: 449 EEGLRGLCN---PKSVTE 463
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. Length = 465 |
| >gnl|CDD|200087 TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Score = 274 bits (703), Expect = 2e-87
Identities = 150/419 (35%), Positives = 215/419 (51%), Gaps = 13/419 (3%)
Query: 5 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI--Q 62
ER+ I+ + A ++ R E +AL + GKP+ + A EV YYA ++
Sbjct: 92 ERAAILFKAAAIVRRRRHEFSALLVKEVGKPWNE-ADAEVAEAIDFMEYYARQMIELAKG 150
Query: 63 GLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 122
+G + Q ++ P GV I PWNFP + + GN +VLK AE P+
Sbjct: 151 KPVNSREGETN-QYVYTPTGVTVVISPWNFPFAIMVGMTVAPIVTGNCVVLKPAEAAPVI 209
Query: 123 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK- 181
A ++L EAGLP GV+ V G G G L H + + FTGS G + + AAK
Sbjct: 210 AAKFVEILEEAGLPKGVVQFVPGSGSEVGDYLVDHPKTSLITFTGSREVGTRIFERAAKV 269
Query: 182 ----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 237
+LK V E+GGK IV EDAD++ AA+ A + F GQ C AGSR VHE VY
Sbjct: 270 QPGQKHLKRVIAEMGGKDTVIVDEDADIELAAQSAFTSAFGFAGQKCSAGSRAVVHEKVY 329
Query: 238 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 297
D+ VE+ + VG P + GP ID + F KI++YI G G +L +GG
Sbjct: 330 DEVVERFVEITESLKVGPPDSADVYVGPVIDQKSFNKIMEYIEIGKAEG-RLVSGGCGDD 388
Query: 298 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN 357
+KGY+I PT+F V +A++EIFGPV + ++ D DE ++ +N ++YGL GV ++N
Sbjct: 389 SKGYFIGPTIFADVDRKARLAQEEIFGPVVAFIRASDFDEALEIANNTEYGLTGGVISNN 448
Query: 358 LDTANTLMRALRVGSVWIN--CFDVFDAAIPFGGYKQSGQGREKGSYS-LSNYLQVKAV 413
D N VG+++ N PFGG+K SG + G L+ ++Q K V
Sbjct: 449 RDHINRAKAEFEVGNLYFNRNITGAIVGYQPFGGFKMSGTDSKAGGPDYLALFMQAKTV 507
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs [Energy metabolism, Amino acids and amines]. Length = 511 |
| >gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Score = 269 bits (691), Expect = 6e-86
Identities = 141/409 (34%), Positives = 201/409 (49%), Gaps = 23/409 (5%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
+R +++ +F LLE + DE+A L T ++GK A+ +V + +
Sbjct: 57 TPVLKRQQVMFKFRQLLEENLDELARLITLEHGKTLAD-ARGDVLRGLEVVEFACSIPHL 115
Query: 61 IQGLTAP--ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 118
++G A G + +P+GV I P+NFP ++ W A+ACGNT VLK +E+
Sbjct: 116 LKGEYLENVARG-IDTYSYRQPLGVVAGITPFNFPAMIPLWMFPMAIACGNTFVLKPSER 174
Query: 119 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 178
P +A+ +++LL EAGLP GVLN+V G G A AL H ++ ++F GST G+ + +
Sbjct: 175 VPGAAMRLAELLQEAGLPDGVLNVVHG-GKEAVNALLDHPDIKAVSFVGSTPVGEYIYER 233
Query: 179 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 238
AA + K V G K+ +V DAD+++ A A F GQ C A S D
Sbjct: 234 AAANG-KRVQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEAD 292
Query: 239 QFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL-- 296
+++ K A K VG G GP I E+I I SGV+ GAKL G +
Sbjct: 293 EWIPKLVERAKKLKVGAGDDPGADMGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKV 352
Query: 297 --GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVF 354
G ++ PT+ V DM I K+EIFGPV SI++ LDE I NA+ YG A +F
Sbjct: 353 PGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDEAIAIINANPYGNGAAIF 412
Query: 355 THNLDTANTLMRALRVGSVWINCFDVFDAAIP-------FGGYKQSGQG 396
T + A R + G V IN IP FGG+K S G
Sbjct: 413 TRSGAAARKFQREVDAGMVGIN------VPIPVPLAFFSFGGWKGSFFG 455
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. Length = 478 |
| >gnl|CDD|181826 PRK09406, gabD1, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 261 bits (669), Expect = 6e-83
Identities = 152/422 (36%), Positives = 211/422 (50%), Gaps = 20/422 (4%)
Query: 2 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 61
T +R++ ADLLE D++AAL T + GK SA+ E + FRYYA +
Sbjct: 43 TFAQRARWANAAADLLEAEADQVAALMTLEMGKTL-ASAKAEALKCAKGFRYYA---EHA 98
Query: 62 QGLTA--PAD----GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV----GPALACGNTI 111
+ L A PAD G ++P+GV ++PWNFPL W+V PAL GN
Sbjct: 99 EALLADEPADAAAVGASRAYVRYQPLGVVLAVMPWNFPL----WQVVRFAAPALMAGNVG 154
Query: 112 VLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTT 171
+LK A P +ALY++ L AG P G + G A A+ V TGS
Sbjct: 155 LLKHASNVPQTALYLADLFRRAGFPDGCFQTLL-VGSGAVEAILRDPRVAAATLTGSEPA 213
Query: 172 GKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTF 231
G+ V +A +K LELGG PFIV AD+D+AAE A A N GQ C A R
Sbjct: 214 GRAVAAIAGDE-IKKTVLELGGSDPFIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFI 272
Query: 232 VHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLET 291
VH VYD F EK A VGDP GP + +++ K + V GA +
Sbjct: 273 VHADVYDAFAEKFVARMAALRVGDPTDPDTDVGPLATEQGRDEVEKQVDDAVAAGATILC 332
Query: 292 GGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAA 351
GG+R G++ PTV T + DM + +E+FGPV S+ + D+DE I+ +NA+ +GL +
Sbjct: 333 GGKRPDGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGS 392
Query: 352 GVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVK 411
+T + + L G V+IN V +PFGG K+SG GRE ++ + + +K
Sbjct: 393 NAWTRDEAEQERFIDDLEAGQVFINGMTVSYPELPFGGVKRSGYGRELSAHGIREFCNIK 452
Query: 412 AV 413
V
Sbjct: 453 TV 454
|
Length = 457 |
| >gnl|CDD|132294 TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 256 bits (655), Expect = 9e-81
Identities = 148/409 (36%), Positives = 215/409 (52%), Gaps = 18/409 (4%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
+T YERS I+ R A LL +EI+ L T ++G ++ + EV + + A A +
Sbjct: 55 LTRYERSAILDRAAALLAARKEEISDLITLESGLS-KKDSLYEVGRVADVLTFAAAEALR 113
Query: 61 IQGLT-----APADGPYHVQTLHEPI-GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLK 114
G P V T EP+ GV I P+N P+ A K+ PA+A N +V+K
Sbjct: 114 DDGQIFSCDLTPHGKARKVFTQREPLLGVISAITPFNHPMNQVAHKIAPAIATNNRMVVK 173
Query: 115 TAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKI 174
+E+TPLSALY++ +L+EAGLPP +L +V+G L ++ VD + FTG GK
Sbjct: 174 PSEKTPLSALYLADILYEAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKY 233
Query: 175 VLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHE 234
+ AA++ + LELGG P IV EDAD+D+AA+LA + N GQ C A R V E
Sbjct: 234 I---AARAGYRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQE 290
Query: 235 SVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGE 294
SV D+F E GDP + G ID + + GA+L G
Sbjct: 291 SVADRFTELLVEKTRAWRYGDPMDPSVDMGTVIDEAAAILFEARVNEAIAQGARLLLGNV 350
Query: 295 RLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVF 354
R GA PTV V M + ++E FGPV ++++ D+D+ I+ SN++ YGL++GV
Sbjct: 351 RDGA---LYAPTVLDRVDPSMTLVREETFGPVSPVIRFCDIDDAIRISNSTAYGLSSGVC 407
Query: 355 THNLDTANTLMRALRVGSVWINCFDVFDAAI---PFGGYKQSGQGREKG 400
T+ LD + L+VG+V N ++V + PFGG K SG G ++G
Sbjct: 408 TNRLDYITRFIAELQVGTV--NVWEVPGYRLELTPFGGIKDSGLGYKEG 454
|
This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. Length = 472 |
| >gnl|CDD|143402 cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Score = 248 bits (634), Expect = 3e-77
Identities = 146/423 (34%), Positives = 226/423 (53%), Gaps = 18/423 (4%)
Query: 5 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG- 63
+R++++L+ ADLL R E+ A T++ GK + + A +V RYYA A +++
Sbjct: 78 DRARLLLKAADLLRRRRRELIATLTYEVGKNWVE-AIDDVAEAIDFIRYYARAALRLRYP 136
Query: 64 -LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 122
+ ++ + +G I PWNFP+ +F + +A GNT++ K AE +
Sbjct: 137 AVEVVPYPGEDNESFYVGLGAGVVISPWNFPVAIFTGMIVAPVAVGNTVIAKPAEDAVVV 196
Query: 123 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK- 181
V ++ HEAG PPGV+ + G G GA L H + + FTGS TGK + + AA+
Sbjct: 197 GYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIYEAAARL 256
Query: 182 ----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 237
+ K + +E GGK+ IV E AD + E + F QGQ C A SR + + Y
Sbjct: 257 APGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGAY 316
Query: 238 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 297
+ +E+ A + VG P + G GP ID+EQ K+L YI G + G +L GG+RL
Sbjct: 317 EPVLERLLKRAERLSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEG-QLVLGGKRLE 375
Query: 298 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD--EVIQRSNASQYGLAAGVFT 355
+GY++ PTV V IA++EIFGPV S+++YKD D E ++ +N++ YGL GV++
Sbjct: 376 GEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIRYKDDDFAEALEVANSTPYGLTGGVYS 435
Query: 356 HNLDTANTLMRALRVGSVWINCFDVFDAAI----PFGGYKQSGQGREKGS-YSLSNYLQV 410
+ R VG+++IN A+ PFGG+K SG + G + L +L++
Sbjct: 436 RKREHLEEARREFHVGNLYIN--RKITGALVGVQPFGGFKLSGTNAKTGGPHYLRRFLEM 493
Query: 411 KAV 413
KAV
Sbjct: 494 KAV 496
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. Length = 500 |
| >gnl|CDD|143406 cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Score = 243 bits (622), Expect = 2e-76
Identities = 132/422 (31%), Positives = 202/422 (47%), Gaps = 29/422 (6%)
Query: 6 RSKIILRFADLLERHNDEI-AALETWDNGKPFEQSAQTEVPMTTRLFRYY----AGWADK 60
R + +L + +EI AAL D GKP ++ TE+ + + W
Sbjct: 22 RKAQLKALKRMLTENEEEIAAALYA-DLGKPPAEAYLTEIAVVLGEIDHALKHLKKWMKP 80
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPL-LMFAWKVGPALACGNTIVLKTAEQT 119
+ P + EP+GV I PWN+PL L A +G A+A GNT+VLK +E
Sbjct: 81 RRVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAPLIG-AIAAGNTVVLKPSELA 139
Query: 120 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 179
P ++ ++KL+ + P + +V G A A LA D + FTGS GKIV++ A
Sbjct: 140 PATSALLAKLIPKY-FDPEAVAVVEGGVEVATALLAEPF--DHIFFTGSPAVGKIVMEAA 196
Query: 180 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239
AK +L PVTLELGGKSP IV +DA+++ AA + F N GQ C A VHES+ D+
Sbjct: 197 AK-HLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFLNAGQTCIAPDYVLVHESIKDE 255
Query: 240 FVEKANALAMKRVVGDPFKGGIQQGPQ----IDSEQFEKILKYIRSGVDGGAKLETGGER 295
+E +K+ + + + ++ P I+ F+++ + K+ GG+
Sbjct: 256 LIE-----ELKKAIKEFYGEDPKESPDYGRIINERHFDRLASLL-----DDGKVVIGGQV 305
Query: 296 LGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFT 355
+ YI PT+ V D + ++EIFGP+ IL Y DLDE I+ N+ LA +F+
Sbjct: 306 -DKEERYIAPTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLFS 364
Query: 356 HNLDTANTLMRALRVGSVWIN--CFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 413
+ ++ G V +N +PFGG SG G G + +K+V
Sbjct: 365 EDKAVQERVLAETSSGGVCVNDVLLHAAIPNLPFGGVGNSGMGAYHGKAGFDTFSHLKSV 424
Query: 414 VT 415
+
Sbjct: 425 LK 426
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. Length = 426 |
| >gnl|CDD|143448 cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Score = 242 bits (620), Expect = 2e-75
Identities = 138/428 (32%), Positives = 206/428 (48%), Gaps = 38/428 (8%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
+ A +R +I+ + D L + + + L + + GK EV + + G + +
Sbjct: 53 VPAPKRGEIVRQIGDALRKKKEALGKLVSLEMGKIL-PEGLGEVQEMIDICDFAVGLSRQ 111
Query: 61 IQGLTAPADGPYHVQTLHE---PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAE 117
+ GLT P++ P H + E P+GV G I +NFP+ ++ W AL CGN +V K +
Sbjct: 112 LYGLTIPSERPGHR--MMEQWNPLGVVGVITAFNFPVAVWGWNAAIALVCGNVVVWKPSP 169
Query: 118 QTPLSALYVSKL----LHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGK 173
TPL+A+ V+K+ L + GLP + ++V G G G AL V ++FTGST G+
Sbjct: 170 TTPLTAIAVTKIVARVLEKNGLPGAIASLVCG-GADVGEALVKDPRVPLVSFTGSTAVGR 228
Query: 174 IVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVH 233
V Q A LELGG + IV EDAD+D A +A GQ C R VH
Sbjct: 229 QVGQAVAA-RFGRSLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVH 287
Query: 234 ESVYDQFVEKANALAMKRV-VGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETG 292
ES+YD+ +E+ A K+V +GDP G GP + L I G + G
Sbjct: 288 ESIYDEVLERLKK-AYKQVRIGDPLDDGTLVGPLHTKAAVDNYLAAIEEAKSQGGTVLFG 346
Query: 293 GERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAG 352
G+ + G Y++PT+ G+ D I K+E F P+ +LK+ L+E I +N GL++
Sbjct: 347 GKVIDGPGNYVEPTIVEGLS-DAPIVKEETFAPILYVLKFDTLEEAIAWNNEVPQGLSSS 405
Query: 353 VFTHNLDTANTLMRALRVGS----VWINCFDVFDAAIP---------FGGYKQSGQGREK 399
+FT +L A + GS V +N I FGG K++G GRE
Sbjct: 406 IFTTDLRNAFRWLGPK--GSDCGIVNVN--------IGTSGAEIGGAFGGEKETGGGRES 455
Query: 400 GSYSLSNY 407
GS + Y
Sbjct: 456 GSDAWKQY 463
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. Length = 474 |
| >gnl|CDD|143414 cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Score = 239 bits (611), Expect = 1e-74
Identities = 137/409 (33%), Positives = 203/409 (49%), Gaps = 23/409 (5%)
Query: 5 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVP-------MTTRLFRYYAGW 57
ER+ I+ RFA+LL+ + +E+A L + + GKP + AQTEV ++ + + G
Sbjct: 23 ERAAILRRFAELLKANKEELARLISRETGKPLWE-AQTEVAAMAGKIDISIKAYHERTG- 80
Query: 58 ADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAE 117
+ T A G ++ H P GV P+NFP + + PAL GNT+V K +E
Sbjct: 81 ----ERATPMAQGRAVLR--HRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSE 134
Query: 118 QTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 177
TP A + +L EAGLPPGVLN+V G G G ALA+H +D L FTGS TG ++ +
Sbjct: 135 LTPAVAELMVELWEEAGLPPGVLNLVQG-GRETGEALAAHEGIDGLLFTGSAATGLLLHR 193
Query: 178 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES-V 236
A K + LE+GG +P +V + AD+D AA L + F GQ C R V + V
Sbjct: 194 QFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQSAFLTAGQRCTCARRLIVPDGAV 253
Query: 237 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 296
D F+E+ A + +G P GP I + + L + + G + ERL
Sbjct: 254 GDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLALGGEPLLAMERL 313
Query: 297 GAKGYYIKPTVF--TGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVF 354
A ++ P + T D + +EIFGP+ + +Y D DE I +NA+++GL+AG+
Sbjct: 314 VAGTAFLSPGIIDVTDAAD---VPDEEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLL 370
Query: 355 THNLDTANTLMRALRVGSVWINCFDVFDA-AIPFGGYKQSGQGREKGSY 402
+ + + +R G V N + PFGG SG R Y
Sbjct: 371 SDDEALFERFLARIRAGIVNWNRPTTGASSTAPFGGVGLSGNHRPSAYY 419
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. Length = 431 |
| >gnl|CDD|143452 cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Score = 238 bits (610), Expect = 2e-74
Identities = 150/417 (35%), Positives = 207/417 (49%), Gaps = 30/417 (7%)
Query: 2 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEV-PMTTRL---FRYYAGW 57
TA ER + R + +EI A D KP + TE+ P+ + + ++ W
Sbjct: 18 TAAERIAKLKRLKKAILARREEIIAALAADFRKPAAEVDLTEILPVLSEINHAIKHLKKW 77
Query: 58 ADKIQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGP---ALACGNTIVL 113
K + + P + +EP GV I PWN+P F GP A+A GNT +L
Sbjct: 78 M-KPKRVRTPLLLFGTKSKIRYEPKGVCLIISPWNYP---FNLAFGPLVSAIAAGNTAIL 133
Query: 114 KTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGK 173
K +E TP ++ ++K++ EA + + G A A L + D + FTGS GK
Sbjct: 134 KPSELTPHTSAVIAKIIREA-FDEDEVAVFEGDAEVAQALLE--LPFDHIFFTGSPAVGK 190
Query: 174 IVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVH 233
IV+ AAK +L VTLELGGKSP IV E AD+ KAA+ + F N GQ C A FVH
Sbjct: 191 IVMAAAAK-HLASVTLELGGKSPTIVDETADLKKAAKKIAWGKFLNAGQTCIAPDYVFVH 249
Query: 234 ESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQ----IDSEQFEKILKYIRSGVDGGAKL 289
ESV D FVE A +++ G + P ++ F+++ + V GAK+
Sbjct: 250 ESVKDAFVEHLKA-EIEKFYGK--DAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKV 306
Query: 290 ETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGL 349
E GG+ A YI PTV T V DM I ++EIFGPV I+ Y+DLDEVI+ NA L
Sbjct: 307 EFGGQ-FDAAQRYIAPTVLTNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPL 365
Query: 350 AAGVFTHNLDTANTLMRALRVGSVWINCFDVF----DAAIPFGGYKQSGQGREKGSY 402
A VF+ + N ++ G V +N DV + +PFGG SG G G Y
Sbjct: 366 ALYVFSKDKANVNKVLARTSSGGVVVN--DVVLHFLNPNLPFGGVNNSGIGSYHGVY 420
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. Length = 433 |
| >gnl|CDD|143443 cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Score = 229 bits (585), Expect = 8e-70
Identities = 140/428 (32%), Positives = 206/428 (48%), Gaps = 38/428 (8%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
ER++I+ + ADLLE + E+ AL + GK A EV RYYA A +
Sbjct: 88 TPVEERAEILEKAADLLEANRGELIALAAAEAGKTLAD-ADAEVREAIDFCRYYAAQARE 146
Query: 61 IQGLTAPADGPYHVQTLH-EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 119
+ + L GV I PWNFPL +F ++ ALA GNT++ K AEQT
Sbjct: 147 LFSDPELPGPTGELNGLELHGRGVFVCISPWNFPLAIFTGQIAAALAAGNTVIAKPAEQT 206
Query: 120 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ-L 178
PL A +LLHEAG+P VL +V G G G AL +H +D + FTGST T K++ + L
Sbjct: 207 PLIAARAVELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRAL 266
Query: 179 AAKSN-LKPVTLELGGKSPFIVCEDADVDKA-AELAHYALFFNQGQCCCAGSRTFVHESV 236
A + + P+ E GGK+ IV A ++A ++ A F + GQ C A ++ E +
Sbjct: 267 AERDGPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSA-FGSAGQRCSALRLLYLQEEI 325
Query: 237 YDQFVE--KANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGE 294
++F+E K ++K VGDP+ GP ID + + + +L G
Sbjct: 326 AERFIEMLKGAMASLK--VGDPWDLSTDVGPLIDKPAGKLLRAHT--------ELMRGEA 375
Query: 295 RL-------GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK--DLDEVIQRSNAS 345
L GY++ P + V L E+FGP+ ++++K DLDE I+ NA+
Sbjct: 376 WLIAPAPLDDGNGYFVAPGIIEIVGIFDL--TTEVFGPILHVIRFKAEDLDEAIEDINAT 433
Query: 346 QYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAI----PFGGYKQSGQGREKGS 401
YGL G+ + + + G+++IN AI PFGG+ SG G + G
Sbjct: 434 GYGLTLGIHSRDEREIEYWRERVEAGNLYINRNIT--GAIVGRQPFGGWGLSGTGPKAGG 491
Query: 402 YSLSNYLQ 409
NYL
Sbjct: 492 P---NYLL 496
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Length = 518 |
| >gnl|CDD|143466 cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 220 bits (563), Expect = 3e-67
Identities = 146/437 (33%), Positives = 198/437 (45%), Gaps = 50/437 (11%)
Query: 3 AYERSKIILRFADLLERHNDEIAALETWDNGKPF---------------------EQSAQ 41
A+ER I+ R ADL+E DE+A L + GKP Q
Sbjct: 43 AHERIAILERLADLMEERADELALLIAREGGKPLVDAKVEVTRAIDGVELAADELGQLGG 102
Query: 42 TEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 101
E+PM GLT + G T EPIGV I +N PL + +V
Sbjct: 103 REIPM----------------GLTPASAGRI-AFTTREPIGVVVAISAFNHPLNLIVHQV 145
Query: 102 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVD 161
PA+A G +++K A TPLS L LLHEAGLP G V A L + V
Sbjct: 146 APAIAAGCPVIVKPALATPLSCLAFVDLLHEAGLPEGWCQAVPCENAVA-EKLVTDPRVA 204
Query: 162 KLAFTGSTTTGKIVLQLAAKSNLKPVT---LELGGKSPFIVCEDADVDKAAELAHYALFF 218
+F GS G ++ +S L P T LE GG +P IV AD+D F+
Sbjct: 205 FFSFIGSARVGWML-----RSKLAPGTRCALEHGGAAPVIVDRSADLDAMIPPLVKGGFY 259
Query: 219 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 278
+ GQ C + R FV + D F ++ A A K VVGDP + GP I + +++ ++
Sbjct: 260 HAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKLVVGDPTDPDTEVGPLIRPREVDRVEEW 319
Query: 279 IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEV 338
+ V GA+L GG+RL Y PTV D ++ EIFGPV + Y DLDE
Sbjct: 320 VNEAVAAGARLLCGGKRLSDTTY--APTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEA 377
Query: 339 IQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAA-IPFGGYKQSGQGR 397
I ++N+ A VFT +LD A +R L +V +N F +PF G +QSG G
Sbjct: 378 IAQANSLPVAFQAAVFTKDLDVALKAVRRLDATAVMVNDHTAFRVDWMPFAGRRQSGYGT 437
Query: 398 EKGSYSLSNYLQVKAVV 414
Y++ + Q K V
Sbjct: 438 GGIPYTMHDMTQEKMAV 454
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 455 |
| >gnl|CDD|143451 cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 218 bits (557), Expect = 1e-66
Identities = 133/419 (31%), Positives = 196/419 (46%), Gaps = 37/419 (8%)
Query: 2 TAYERSKIILRFADLLERHNDEIA-ALETWDNGKPFEQSAQTEVPMTTRLFRYY----AG 56
+ ER + R LL + D +A A+ + ++ E+ + ++
Sbjct: 18 SLEERRDRLDRLKALLLDNQDALAEAISADFGHRSRHETLLAEILPSIAGIKHARKHLKK 77
Query: 57 WADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGP---ALACGNTIVL 113
W + P + ++P+GV G I+PWN+PL + +GP ALA GN +++
Sbjct: 78 WMKPSRRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYL---ALGPLIAALAAGNRVMI 134
Query: 114 KTAEQTP-LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTG 172
K +E TP SAL +++LL E + +V+G G AA S + D L FTGST G
Sbjct: 135 KPSEFTPRTSAL-LAELLAEY-FDEDEVAVVTG-GADVAAAF-SSLPFDHLLFTGSTAVG 190
Query: 173 KIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFV 232
+ V++ AA+ NL PVTLELGGKSP I+ DAD+ KAAE + N GQ C A V
Sbjct: 191 RHVMRAAAE-NLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLLNAGQTCVAPDYVLV 249
Query: 233 HESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQ----IDSEQFEKILKYIRSGVDGGAK 288
E ++FV A A A+ ++ + P I+ + ++ + GA+
Sbjct: 250 PEDKLEEFVAAAKA-AVAKMYPT-----LADNPDYTSIINERHYARLQGLLEDARAKGAR 303
Query: 289 LET---GGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS 345
+ GE A + PT+ V DDM + ++EIFGP+ IL Y LDE I NA
Sbjct: 304 VIELNPAGEDFAATR-KLPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINAR 362
Query: 346 QYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV-FDAA---IPFGGYKQSGQGREKG 400
LA F + + ++R G V IN D A +PFGG SG G G
Sbjct: 363 PRPLALYYFGEDKAEQDRVLRRTHSGGVTIN--DTLLHVAQDDLPFGGVGASGMGAYHG 419
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. Length = 434 |
| >gnl|CDD|143453 cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Score = 217 bits (554), Expect = 4e-66
Identities = 122/349 (34%), Positives = 178/349 (51%), Gaps = 29/349 (8%)
Query: 78 HEPIGVAGQIIPWNFPLLMFAWKVGP---ALACGNTIVLKTAEQTPLSALYVSKLLHEAG 134
EP+GV I PWN+P+L+ + P A+A G T+VLK +E TP +A +++L+ +
Sbjct: 106 KEPLGVVLIIGPWNYPVLL---ALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVPKY- 161
Query: 135 LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGK 194
L P +V G P A L DK+ +TGS G+I+ + AAK +L PVTLELGGK
Sbjct: 162 LDPDAFQVVQGGVPETTALLEQKF--DKIFYTGSGRVGRIIAEAAAK-HLTPVTLELGGK 218
Query: 195 SPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 254
SP IV ++AD++ AA+ + F N GQ C A V SVYD+FVE +K+V+
Sbjct: 219 SPVIVTKNADLELAAKRILWGKFGNAGQICVAPDYVLVDPSVYDEFVE-----ELKKVLD 273
Query: 255 DPFKGGIQQGPQ----IDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTG 310
+ + GG P ++ F ++ + + K+ GGE A +I PT+ +
Sbjct: 274 EFYPGGANASPDYTRIVNPRHFNRLKSLLDT---TKGKVVIGGEMDEAT-RFIPPTIVSD 329
Query: 311 VKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRV 370
V D + +E+FGPV I+K DLDE I+ N+ LA +FT + + ++ R
Sbjct: 330 VSWDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTRS 389
Query: 371 GSVWINCFDVFDAA----IPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 415
G V IN D PFGG SG G G Y + + VV
Sbjct: 390 GGVVIN--DTLIHVGVDNAPFGGVGDSGYGAYHGKYGFDTFTHERTVVK 436
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. Length = 436 |
| >gnl|CDD|143454 cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Score = 216 bits (552), Expect = 1e-65
Identities = 118/357 (33%), Positives = 175/357 (49%), Gaps = 36/357 (10%)
Query: 79 EPIGVAGQIIPWNFPL-LMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPP 137
EP GV I PWN+P L A +G A+A GNT VLK +E TP ++ ++K++ E
Sbjct: 99 EPYGVVLIIAPWNYPFQLALAPLIG-AIAAGNTAVLKPSELTPNTSKVIAKIIEET-FDE 156
Query: 138 GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPF 197
+ +V G L D + FTGS GKIV++ AAK +L PVTLELGGKSP
Sbjct: 157 EYVAVVEGGVEENQELLDQKF--DYIFFTGSVRVGKIVMEAAAK-HLTPVTLELGGKSPC 213
Query: 198 IVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 257
IV EDA++ AA+ + F N GQ C A VHESV ++F++ +K + +
Sbjct: 214 IVDEDANLKLAAKRIVWGKFLNAGQTCVAPDYVLVHESVKEKFIK-----ELKEEIKKFY 268
Query: 258 KGGIQQGP---QIDSEQ-FEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKD 313
+ P +I +E+ F+++ + +G K+ GG + YI+PT+ V
Sbjct: 269 GEDPLESPDYGRIINEKHFDRLAGLLDNG-----KIVFGGNT-DRETLYIEPTILDNVTW 322
Query: 314 DMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSV 373
D + ++EIFGP+ +L Y LDE I+ + LA +F+ + ++ L G
Sbjct: 323 DDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEKKVLENLSFGGG 382
Query: 374 WINCFDVFDAAI-------PFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKNPAWL 423
IN D + PFGG SG G G YS + K+++ K W
Sbjct: 383 CIN-----DTIMHLANPYLPFGGVGNSGMGSYHGKYSFDTFSHKKSIL---KKSTWF 431
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. Length = 449 |
| >gnl|CDD|233325 TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Score = 213 bits (544), Expect = 4e-64
Identities = 137/420 (32%), Positives = 200/420 (47%), Gaps = 26/420 (6%)
Query: 3 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 62
A ER+ + R ADLLE H E+ AL + GK +A EV RYYA +
Sbjct: 95 AKERAAKLDRLADLLELHMPELMALCVREAGKTI-HNAIAEVREAVDFCRYYAKQVRDVL 153
Query: 63 GLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 122
G + E GV I PWNFPL +F ++ ALA GNT++ K AEQT L
Sbjct: 154 G-----------EFSVESRGVFVCISPWNFPLAIFTGQISAALAAGNTVIAKPAEQTSLI 202
Query: 123 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 182
A +L+ EAG P G + ++ G G GAAL S + +AFTGST +++ Q A+
Sbjct: 203 AYRAVELMQEAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTLAQR 262
Query: 183 NLKPVTL--ELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
PV L E GG++ IV A ++ + F + GQ C A V E V D+
Sbjct: 263 EDAPVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVADRV 322
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG---AKLETGGERLG 297
+ + VG P GP ID+E + +L +I A+L R
Sbjct: 323 LTMIQGAMQELKVGVPHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSRAC 382
Query: 298 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK--DLDEVIQRSNASQYGLAAGVFT 355
G ++ PT+F DD+ +E+FGPV +++YK +LD+++ + N + YGL GV +
Sbjct: 383 QHGTFVAPTLFE--LDDIAELSEEVFGPVLHVVRYKARELDQIVDQINQTGYGLTMGVHS 440
Query: 356 HNLDTANTLMRALRVGSVWINCFDVFDAAI---PFGGYKQSGQG-REKGSYSLSNYLQVK 411
T + + RVG+ ++N + A + PFGG SG G + G + L QV+
Sbjct: 441 RIETTYRWIEKHARVGNCYVN-RNQVGAVVGVQPFGGQGLSGTGPKAGGPHYLYRLTQVQ 499
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase [Energy metabolism, Amino acids and amines]. Length = 500 |
| >gnl|CDD|226683 COG4230, COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 206 bits (526), Expect = 2e-59
Identities = 141/414 (34%), Positives = 203/414 (49%), Gaps = 28/414 (6%)
Query: 5 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA-DKIQG 63
ER+ I+ R ADL+E ++ L + GK +A EV RYYAG A D
Sbjct: 173 ERAAILERAADLMEAQMPQLMGLLVREAGKTL-SNAIAEVREAVDFLRYYAGQARDTFGN 231
Query: 64 LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 123
LT H P+G I PWNFPL +F ++ ALA GN+++ K AEQTPL A
Sbjct: 232 LT------------HRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIA 279
Query: 124 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 183
+LLHEAG+PPGVL ++ G G T GAAL + V + FTGST +++ + AK
Sbjct: 280 AQAVRLLHEAGVPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQ 339
Query: 184 LKPVTL--ELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 241
+P+ L E GG++ IV A ++ + F + GQ C A + E V D+ +
Sbjct: 340 GRPIPLIAETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRVLCLQEDVADRIL 399
Query: 242 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI-RSGVDGGAKLETGGERLGAKG 300
+ VG+P + GP ID+E I K+I G + KG
Sbjct: 400 TMLKGAMAELRVGNPDRLTTDVGPVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKG 459
Query: 301 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK--DLDEVIQRSNASQYGLAAGVFTHNL 358
++ PT+ D L + E+FGPV +++YK +LDEVI + NA+ YGL GV T
Sbjct: 460 TFVAPTLIELENLDEL--QREVFGPVLHVVRYKRDELDEVIDQINATGYGLTLGVHTRID 517
Query: 359 DTANTLMRALRVGSVWINCFDVFDAAI---PFGGYKQSGQGREKGSYSLSNYLQ 409
+T + G++++N ++ A + PFGG SG G + G YL
Sbjct: 518 ETIAHVTERAHAGNLYVN-RNIVGAVVGVQPFGGEGLSGTGPKAGG---PLYLL 567
|
Length = 769 |
| >gnl|CDD|184426 PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 197 bits (502), Expect = 3e-58
Identities = 130/422 (30%), Positives = 199/422 (47%), Gaps = 29/422 (6%)
Query: 5 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 64
R++ + L ++E+A + T + GKP Q A+ EV + L +YA G
Sbjct: 52 YRAQKLRDIGKALRARSEEMAQMITREMGKPINQ-ARAEVAKSANLCDWYAE-----HGP 105
Query: 65 TAPADGPYHVQT-----LHEPIGVAGQIIPWNFPLLMFAWKV----GPALACGNTIVLKT 115
P V+ + P+G I+PWNFPL W+V P L GN +LK
Sbjct: 106 AMLKAEPTLVENQQAVIEYRPLGTILAIMPWNFPL----WQVMRGAVPILLAGNGYLLKH 161
Query: 116 AEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDK----LAFTGSTTT 171
A A ++++ +AG+P GV ++ A S M D + TGS
Sbjct: 162 APNVMGCAQLIAQVFKDAGIPQGVYGWLN-----ADNDGVSQMINDSRIAAVTVTGSVRA 216
Query: 172 GKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTF 231
G + A + LK LELGG PFIV DAD++ A + A + N GQ C A R
Sbjct: 217 GAAIGAQAGAA-LKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFI 275
Query: 232 VHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLET 291
+ E + F E+ A A +GDP GP + +++ + + + GA+L
Sbjct: 276 IEEGIASAFTERFVAAAAALKMGDPRDEENALGPMARFDLRDELHHQVEATLAEGARLLL 335
Query: 292 GGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAA 351
GGE++ G Y PTV V +M ++E+FGPV +I KD + ++ +N S++GL+A
Sbjct: 336 GGEKIAGAGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKDAEHALELANDSEFGLSA 395
Query: 352 GVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVK 411
+FT + A + L G V+IN + DA + FGG K+SG GRE + L + ++
Sbjct: 396 TIFTTDETQARQMAARLECGGVFINGYCASDARVAFGGVKKSGFGRELSHFGLHEFCNIQ 455
Query: 412 AV 413
V
Sbjct: 456 TV 457
|
Length = 462 |
| >gnl|CDD|237017 PRK11904, PRK11904, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 204 bits (521), Expect = 6e-58
Identities = 154/418 (36%), Positives = 215/418 (51%), Gaps = 42/418 (10%)
Query: 3 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 62
ER+ I+ R ADLLE + E+ AL + GK Q A EV RYYA A ++
Sbjct: 606 VEERAAILERAADLLEANRAELIALCVREAGKTL-QDAIAEVREAVDFCRYYAAQARRLF 664
Query: 63 G----LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 118
G L P G + LH GV I PWNFPL +F +V ALA GNT++ K AEQ
Sbjct: 665 GAPEKLPGP-TGESNELRLH-GRGVFVCISPWNFPLAIFLGQVAAALAAGNTVIAKPAEQ 722
Query: 119 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ- 177
TPL A KLLHEAG+P VL ++ G G T GAAL + + +AFTGST T +I+ +
Sbjct: 723 TPLIAAEAVKLLHEAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRT 782
Query: 178 LAAKSNLKPVTL--ELGGKSPFIVCEDA---------DVDKAAELAHYALFFNQGQCCCA 226
LAA+ V L E GG++ IV D+ DV +A F + GQ C A
Sbjct: 783 LAARDG-PIVPLIAETGGQNAMIV--DSTALPEQVVDDVVTSA-------FRSAGQRCSA 832
Query: 227 GSRTFVHESVYDQFVEK-ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 285
FV E + D+ +E A+A + VGDP GP ID+E + +I +
Sbjct: 833 LRVLFVQEDIADRVIEMLKGAMA-ELKVGDPRLLSTDVGPVIDAEAKANLDAHIER-MKR 890
Query: 286 GAKL--ETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK--DLDEVIQR 341
A+L + G+++ PT F D + + E+FGP+ +++YK DLD+VI
Sbjct: 891 EARLLAQLPLPAGTENGHFVAPTAFE--IDSISQLEREVFGPILHVIRYKASDLDKVIDA 948
Query: 342 SNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAI---PFGGYKQSGQG 396
NA+ YGL G+ + +TA+ + +RVG+V++N + A + PFGG SG G
Sbjct: 949 INATGYGLTLGIHSRIEETADRIADRVRVGNVYVN-RNQIGAVVGVQPFGGQGLSGTG 1005
|
Length = 1038 |
| >gnl|CDD|130783 TIGR01722, MMSDH, methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 196 bits (500), Expect = 6e-58
Identities = 133/425 (31%), Positives = 198/425 (46%), Gaps = 24/425 (5%)
Query: 5 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 64
+R+ ++LR+ LL+ H DEIA L T ++GK A +V + + G ++G
Sbjct: 61 QRTSVLLRYQALLKEHRDEIAELITAEHGKTHS-DALGDVARGLEVVEHACGVNSLLKGE 119
Query: 65 TAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 123
T+ V ++ +P+GV I P+NFP ++ W A+ACGNT VLK +E+ P +A
Sbjct: 120 TSTQVATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFPIAIACGNTFVLKPSEKVPSAA 179
Query: 124 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 183
+ +++L EAG P GVLN+V G A L H +V ++F GST G+ + +
Sbjct: 180 VKLAELFSEAGAPDGVLNVVHG-DKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGSAHG 238
Query: 184 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 243
K V G K+ +V DAD D AA+ A + GQ C A S V D++V +
Sbjct: 239 -KRVQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAIS-AAVLVGAADEWVPE 296
Query: 244 ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY-- 301
A K +G G + GP I + +++ I G GA++ G GY
Sbjct: 297 IRERAEKIRIGPGDDPGAEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEE 356
Query: 302 --YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLD 359
++ PT+ V M ++EIFGPV +L+ L+E I NAS YG +FT +
Sbjct: 357 GNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTLEEAIALINASPYGNGTAIFTRDGA 416
Query: 360 TANTLMRALRVGSVWINCFDVFDAAIP-------FGGYKQS--GQGREKGSYSLSNYLQV 410
A + VG V +N IP F G+K S G G Y +
Sbjct: 417 AARRFQHEIEVGQVGVN------VPIPVPLPYFSFTGWKDSFFGDHHIYGKQGTHFYTRG 470
Query: 411 KAVVT 415
K V T
Sbjct: 471 KTVTT 475
|
Involved in valine catabolism, methylmalonate-semialdehyde dehydrogenase catalyzes the irreversible NAD+- and CoA-dependent oxidative decarboxylation of methylmalonate semialdehyde to propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase has been characterized in both prokaryotes and eukaryotes, functioning as a mammalian tetramer and a bacterial homodimer. Although similar in monomeric molecular mass and enzymatic activity, the N-terminal sequence in P.aeruginosa does not correspond with the N-terminal sequence predicted for rat liver. Sequence homology to a variety of prokaryotic and eukaryotic aldehyde dehydrogenases places MMSDH in the aldehyde dehydrogenase (NAD+) superfamily (pfam00171), making MMSDH's CoA requirement unique among known ALDHs. Methylmalonate semialdehyde dehydrogenase is closely related to betaine aldehyde dehydrogenase, 2-hydroxymuconic semialdehyde dehydrogenase, and class 1 and 2 aldehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus [Energy metabolism, Amino acids and amines]. Length = 477 |
| >gnl|CDD|240392 PTZ00381, PTZ00381, aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Score = 195 bits (498), Expect = 3e-57
Identities = 127/416 (30%), Positives = 201/416 (48%), Gaps = 17/416 (4%)
Query: 6 RSKIILRFADLLERHNDEI-AALETWDNGKPFEQSAQTEVPMTT----RLFRYYAGWADK 60
R + + +LE + E A+ D G+ ++ TEV +T L ++ +
Sbjct: 31 RKQQLRNLLRMLEENKQEFSEAVHK-DLGRHPFETKMTEVLLTVAEIEHLLKHLDEYLKP 89
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
+ T GP + EP+GV I WN+PL + + A+A GNT+VLK +E +P
Sbjct: 90 EKVDTVGVFGPGKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSP 149
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
++ ++KLL + L P + ++ G L D + FTGS GK+V+Q AA
Sbjct: 150 HTSKLMAKLLTKY-LDPSYVRVIEGGVEVTTELLKEPF--DHIFFTGSPRVGKLVMQAAA 206
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
+ NL P TLELGGKSP IV + ++ AA + F N GQ C A VH S+ D+F
Sbjct: 207 E-NLTPCTLELGGKSPVIVDKSCNLKVAARRIAWGKFLNAGQTCVAPDYVLVHRSIKDKF 265
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 300
+E A A+K G+ K ++ +++ + I+ D G K+ GGE + +
Sbjct: 266 IE-ALKEAIKEFFGEDPKKSEDYSRIVNEFHTKRLAELIK---DHGGKVVYGGE-VDIEN 320
Query: 301 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 360
Y+ PT+ D + ++EIFGP+ IL Y+++DEV++ N+ LA F +
Sbjct: 321 KYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDKRH 380
Query: 361 ANTLMRALRVGSVWIN--CFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 414
++ G+V IN F + + +PFGG SG G G Y + K V+
Sbjct: 381 KELVLENTSSGAVVINDCVFHLLNPNLPFGGVGNSGMGAYHGKYGFDTFSHPKPVL 436
|
Length = 493 |
| >gnl|CDD|237018 PRK11905, PRK11905, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 195 bits (498), Expect = 1e-54
Identities = 136/422 (32%), Positives = 199/422 (47%), Gaps = 67/422 (15%)
Query: 5 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 64
ER+ I+ R ADL+E H E+ AL + GK +A EV RYYA Q
Sbjct: 613 ERAAILERAADLMEAHMPELFALAVREAGKTL-ANAIAEVREAVDFLRYYAA-----QAR 666
Query: 65 TAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 124
H+P+G I PWNFPL +F ++ AL GNT++ K AEQTPL A
Sbjct: 667 RLLNGPG------HKPLGPVVCISPWNFPLAIFTGQIAAALVAGNTVLAKPAEQTPLIAA 720
Query: 125 YVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 184
+LLHEAG+P L ++ G G T GAAL + + + FTGST +++ + AK +
Sbjct: 721 RAVRLLHEAGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKRSG 780
Query: 185 KPVTL--ELGGKSPFIVCED---------ADVDKAAELAHYALFFNQGQCCCAGSRTFVH 233
PV L E GG++ IV D ADV +A F + GQ C A +
Sbjct: 781 PPVPLIAETGGQNAMIV--DSSALPEQVVADVIASA-------FDSAGQRCSALRVLCLQ 831
Query: 234 ESVYDQFVEKANAL--AMK-RVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLE 290
E V D+ + L AM +GDP++ GP ID+E I +I +
Sbjct: 832 EDVADRVLT---MLKGAMDELRIGDPWRLSTDVGPVIDAEAQANIEAHI-------EAMR 881
Query: 291 TGGERL--------GAKGYYIKPTVFTGVKD--DMLIAKDEIFGPVQSILKYK--DLDEV 338
G + KG ++ PT+ + D+ + E+FGPV ++++K +LD V
Sbjct: 882 AAGRLVHQLPLPAETEKGTFVAPTLIE-IDSISDL---EREVFGPVLHVVRFKADELDRV 937
Query: 339 IQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAI----PFGGYKQSG 394
I NA+ YGL G+ + +T + +R G++++N + A+ PFGG SG
Sbjct: 938 IDDINATGYGLTFGLHSRIDETIAHVTSRIRAGNIYVNRNII--GAVVGVQPFGGEGLSG 995
Query: 395 QG 396
G
Sbjct: 996 TG 997
|
Length = 1208 |
| >gnl|CDD|181873 PRK09457, astD, succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 185 bits (472), Expect = 1e-53
Identities = 134/419 (31%), Positives = 200/419 (47%), Gaps = 52/419 (12%)
Query: 5 ERSKIILRFADLLERHNDEIA---ALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 61
ER I+ RFA LLE + +E+A A ET GKP ++A TEV +KI
Sbjct: 60 ERQAIVERFAALLEENKEELAEVIARET---GKPLWEAA-TEV----------TAMINKI 105
Query: 62 QGLTAPADGPYHVQT--------------LHEPIGVAGQIIPWNFPLLMFAWKVGPALAC 107
++ A YH +T H P GV P+NFP + + PAL
Sbjct: 106 -AISIQA---YHERTGEKRSEMADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLA 161
Query: 108 GNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTG 167
GNT+V K +E TP A KL +AGLP GVLN+V G G G ALA+H ++D L FTG
Sbjct: 162 GNTVVFKPSELTPWVAELTVKLWQQAGLPAGVLNLVQG-GRETGKALAAHPDIDGLLFTG 220
Query: 168 STTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAG 227
S TG ++ + A K + LE+GG +P ++ E AD+D A L + F + GQ C
Sbjct: 221 SANTGYLLHRQFAGQPEKILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCA 280
Query: 228 SRTFVHESVY-DQFVEKANALAMKRVVGDPFKGGIQQ-----GPQIDSEQFEKILKYIRS 281
R V + D F+ + A+A + VG + G I + + ++
Sbjct: 281 RRLLVPQGAQGDAFLARLVAVAKRLTVGRWD----AEPQPFMGAVISEQAAQGLVAAQAQ 336
Query: 282 GVDGGAKLETGGERLGAKGYYIKPTVF--TGVKDDMLIAKDEIFGPVQSILKYKDLDEVI 339
+ G K +L A + P + TGV + + +E FGP+ +++Y D DE I
Sbjct: 337 LLALGGKSLLEMTQLQAGTGLLTPGIIDVTGVAE---LPDEEYFGPLLQVVRYDDFDEAI 393
Query: 340 QRSNASQYGLAAGVFTHNLDTANTLMRALRVGSV-WINCFDVFDAAIPFGGYKQSGQGR 397
+ +N +++GL+AG+ + + + + + +R G V W +A PFGG SG R
Sbjct: 394 RLANNTRFGLSAGLLSDDREDYDQFLLEIRAGIVNWNKPLTGASSAAPFGGVGASGNHR 452
|
Length = 487 |
| >gnl|CDD|215110 PLN00412, PLN00412, NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 183 bits (467), Expect = 7e-53
Identities = 140/441 (31%), Positives = 209/441 (47%), Gaps = 44/441 (9%)
Query: 4 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 63
++R++++ + A +L+ H IA + KP + A TEV + L Y A +G
Sbjct: 75 WKRAELLHKAAAILKEHKAPIAECLVKEIAKP-AKDAVTEVVRSGDLISYTAE-----EG 128
Query: 64 LTAPADGPYHVQ-------------TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNT 110
+ +G + V T P+GV I P+N+P+ + K+ PAL GN
Sbjct: 129 VRILGEGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNA 188
Query: 111 IVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTT 170
+VLK Q ++AL++ H AG P G+++ V+G G G L H V+ ++FTG T
Sbjct: 189 VVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGGDT 248
Query: 171 TGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRT 230
+ ++ K+ + P+ +ELGGK IV EDAD+D AA F GQ C A
Sbjct: 249 G----IAISKKAGMVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVV 304
Query: 231 FVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG----G 286
V ESV D VEK NA K VG P + I E +I V G
Sbjct: 305 LVMESVADALVEKVNAKVAKLTVGPP-----EDDCDITPVVSESSANFIEGLVMDAKEKG 359
Query: 287 AKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQ 346
A +R +G I P + V+ DM IA +E FGPV +++ ++E I NAS
Sbjct: 360 ATFCQEWKR---EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASN 416
Query: 347 YGLAAGVFTHNLDTANTLMRALRVGSVWINCF-----DVFDAAIPFGGYKQSGQGREKGS 401
+GL VFT +++ A + A+ G+V IN D F PF G K SG G + +
Sbjct: 417 FGLQGCVFTRDINKAILISDAMETGTVQINSAPARGPDHF----PFQGLKDSGIGSQGIT 472
Query: 402 YSLSNYLQVKAVVTALKNPAW 422
S++ +VK+ V L P++
Sbjct: 473 NSINMMTKVKSTVINLPKPSY 493
|
Length = 496 |
| >gnl|CDD|143450 cd07132, ALDH_F3AB, Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Score = 180 bits (459), Expect = 4e-52
Identities = 123/336 (36%), Positives = 166/336 (49%), Gaps = 29/336 (8%)
Query: 78 HEPIGVAGQIIPWNFPL-LMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLP 136
EP+GV I WN+PL L VG A+A GN +V+K +E +P +A KLL E L
Sbjct: 98 KEPLGVVLIIGAWNYPLQLTLVPLVG-AIAAGNCVVIKPSEVSPATA----KLLAE--LI 150
Query: 137 PGVLN-----IVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLEL 191
P L+ +V G G L D + +TGST+ GKIV+Q AAK +L PVTLEL
Sbjct: 151 PKYLDKECYPVVLG-GVEETTELLKQ-RFDYIFYTGSTSVGKIVMQAAAK-HLTPVTLEL 207
Query: 192 GGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR 251
GGKSP V + D+D AA + F N GQ C A V ++FVE +K
Sbjct: 208 GGKSPCYVDKSCDIDVAARRIAWGKFINAGQTCIAPDYVLCTPEVQEKFVEALKK-TLKE 266
Query: 252 VVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGV 311
G+ K G I+ F+++ K + G K+ GG+ K YI PTV T V
Sbjct: 267 FYGEDPKESPDYGRIINDRHFQRLKKLLSGG-----KVAIGGQ-TDEKERYIAPTVLTDV 320
Query: 312 KDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVG 371
K + ++EIFGP+ I+ +LDE I+ N+ + LA VF++N N ++ G
Sbjct: 321 KPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINKILSNTSSG 380
Query: 372 SVWINCFDVFDAAI----PFGGYKQSGQGREKGSYS 403
V +N D PFGG SG G G YS
Sbjct: 381 GVCVN--DTIMHYTLDSLPFGGVGNSGMGAYHGKYS 414
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. Length = 443 |
| >gnl|CDD|177949 PLN02315, PLN02315, aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Score = 180 bits (458), Expect = 1e-51
Identities = 127/425 (29%), Positives = 208/425 (48%), Gaps = 30/425 (7%)
Query: 2 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 61
A +R +I+ + D L D + L + + GK + EV + + G + ++
Sbjct: 76 PAPKRGEIVRQIGDALRAKLDYLGRLVSLEMGKILAEGI-GEVQEIIDMCDFAVGLSRQL 134
Query: 62 QGLTAPADGPYHVQT-LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
G P++ P H+ + P+G+ G I +NFP + W AL CGN +V K A TP
Sbjct: 135 NGSIIPSERPNHMMMEVWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTP 194
Query: 121 LSALYVSKL----LHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 176
L + ++KL L + LP + G G G A+A + ++FTGS+ G +V
Sbjct: 195 LITIAMTKLVAEVLEKNNLPGAIFTSFCG-GAEIGEAIAKDTRIPLVSFTGSSKVGLMV- 252
Query: 177 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 236
Q + LEL G + IV +DAD+ A +A GQ C R +HES+
Sbjct: 253 QQTVNARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESI 312
Query: 237 YDQFVEKANALAMKRVVGDPFKGGIQQGP---QIDSEQFEKILKYIRSGVDGGAKLETGG 293
YD +E+ + + +GDP + G GP + FEK ++ I+S G K+ TGG
Sbjct: 313 YDDVLEQLLTVYKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEIIKS---QGGKILTGG 369
Query: 294 ERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGV 353
+ ++G +++PT+ + D + K+E+FGPV ++K+K L+E I+ +N+ GL++ +
Sbjct: 370 SAIESEGNFVQPTIVE-ISPDADVVKEELFGPVLYVMKFKTLEEAIEINNSVPQGLSSSI 428
Query: 354 FTHNLDTANTLMRALRVGSVWINCFDVFDAAIP---------FGGYKQSGQGREKGSYSL 404
FT N +T +G + +C + + IP FGG K +G GRE GS S
Sbjct: 429 FTRNPETIFKW-----IGPLGSDC-GIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSW 482
Query: 405 SNYLQ 409
Y++
Sbjct: 483 KQYMR 487
|
Length = 508 |
| >gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 179 bits (456), Expect = 2e-51
Identities = 127/410 (30%), Positives = 196/410 (47%), Gaps = 22/410 (5%)
Query: 5 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEV-PMTTRLFRYYAGWADKIQG 63
ER ++ RFA LLE + +A + + GKP ++ TEV M ++ + ++ G
Sbjct: 58 ERIAVVQRFAALLEERKEALARVIARETGKPLWETR-TEVASMIGKVAISIKAYHER-TG 115
Query: 64 LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 123
+ H P GV P+NFP + + PAL GNT+V K +E TP A
Sbjct: 116 ESENPMPDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVA 175
Query: 124 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 183
KL +AGLP GVLN+V G G ALA+H ++D L FTGS+ TG ++ + A
Sbjct: 176 EETVKLWEKAGLPAGVLNLVQG-ARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAGRP 234
Query: 184 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY-DQFVE 242
K + LE+GG +P IV E AD+D A L + F + GQ C R V + D F+
Sbjct: 235 EKILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDAFLA 294
Query: 243 KANALAMKRVVGD------PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 296
+ +A + VG PF G + I + +++L + G K +L
Sbjct: 295 RLVEVAERLTVGAWDAEPQPFMGAV-----ISLQAAQRLLAAQAKLLALGGKSLLAMRQL 349
Query: 297 GAKGYYIKPTVF--TGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVF 354
+ P + TGV + + +E FGP+ +++Y D DE I +N +++GL+AG+
Sbjct: 350 DPGAALLTPGIIDVTGVAE---LPDEEHFGPLLQVIRYDDFDEAIAIANNTRFGLSAGLL 406
Query: 355 THNLDTANTLMRALRVGSV-WINCFDVFDAAIPFGGYKQSGQGREKGSYS 403
+ + + + + +R G V W +A PFGG SG R Y+
Sbjct: 407 SDDRELYDRFLLEIRAGIVNWNKPLTGASSAAPFGGIGASGNHRPSAYYA 456
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484 |
| >gnl|CDD|166060 PLN02419, PLN02419, methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Score = 172 bits (437), Expect = 5e-48
Identities = 135/425 (31%), Positives = 204/425 (48%), Gaps = 18/425 (4%)
Query: 6 RSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT 65
R +++L+F +L+ ++ D++A T + GK + S ++ + + G A G
Sbjct: 175 RQRVMLKFQELIRKNMDKLAMNITTEQGKTLKDS-HGDIFRGLEVVEHACGMATLQMGEY 233
Query: 66 AP-ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 124
P ++ EP+GV I P+NFP ++ W A+ CGNT +LK +E+ P +++
Sbjct: 234 LPNVSNGVDTYSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASV 293
Query: 125 YVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 184
+++L EAGLP GVLNIV G T A+ ++ ++F GS T G + AA
Sbjct: 294 ILAELAMEAGLPDGVLNIVHGTNDTVN-AICDDEDIRAVSFVGSNTAGMHIYARAAAKG- 351
Query: 185 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSR-TFVHE--SVYDQFV 241
K + +G K+ +V DA++D A F GQ C A S FV + S D+ V
Sbjct: 352 KRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGDAKSWEDKLV 411
Query: 242 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY 301
E+A AL K G + GP I + E+I + I+SGVD GAKL G + GY
Sbjct: 412 ERAKAL--KVTCGSEPDADL--GPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGY 467
Query: 302 ----YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN 357
+I PT+ +GV DM K+EIFGPV ++ DE I N ++YG A +FT +
Sbjct: 468 EKGNFIGPTILSGVTPDMECYKEEIFGPVLVCMQANSFDEAISIINKNKYGNGAAIFTSS 527
Query: 358 LDTANTLMRALRVGSVWINC-FDVFDAAIPFGGYKQSGQGREK--GSYSLSNYLQVKAVV 414
A + G + IN V F G K S G G + + Q+K V
Sbjct: 528 GAAARKFQMDIEAGQIGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVDFFTQIKLVT 587
Query: 415 TALKN 419
K+
Sbjct: 588 QKQKD 592
|
Length = 604 |
| >gnl|CDD|143455 cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Score = 166 bits (421), Expect = 1e-46
Identities = 130/422 (30%), Positives = 190/422 (45%), Gaps = 44/422 (10%)
Query: 16 LLERHNDEI-AALETWDNGKPFEQSAQTEVPMTTR--------LFRYYAGWADKIQGLTA 66
L++ + D+I AAL D GKP +S + EV + L ++ A K T
Sbjct: 33 LVDENEDDIFAALRQ-DLGKPSAESFRDEVSVLVSSCKLAIKELKKWMAPEKVKTPLTTF 91
Query: 67 PADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 126
PA + + EP+GV I WNFP L+ V A+A GN +VLK +E P ++ +
Sbjct: 92 PAKA----EIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALL 147
Query: 127 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKP 186
+KL+ L + ++ G G AL + DK+ FTGS G+I++ AAK +L P
Sbjct: 148 AKLI-PEYLDTKAIKVIEG-GVPETTALLEQ-KWDKIFFTGSPRVGRIIMAAAAK-HLTP 203
Query: 187 VTLELGGKSPFIVCEDADVDKAAE---LAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 243
VTLELGGK P IV D+ A + N GQ C A V ES ++
Sbjct: 204 VTLELGGKCPVIVDSTVDLKVAVRRIAGGKWGC--NNGQACIAPDYVLVEESFAPTLID- 260
Query: 244 ANALAMKRVVGDPF-KGGIQQG--PQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 300
A+K + F + + +I + + L + K+ GGER K
Sbjct: 261 ----ALKNTLEKFFGENPKESKDLSRIVNSHHFQRLSRLLDDPSVADKIVHGGER-DEKN 315
Query: 301 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 360
YI+PT+ D I +EIFGP+ I+ K ++E I+ N+ LAA VFT N +
Sbjct: 316 LYIEPTILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKEL 375
Query: 361 ANTLMRALRVGSVWINCFDVFDAAI-------PFGGYKQSGQGREKGSYSLSNYLQVKAV 413
++ G V N D + PFGG +SG G G +S + KAV
Sbjct: 376 KRRIVAETSSGGVTFN-----DTVVQYAIDTLPFGGVGESGFGAYHGKFSFDAFSHKKAV 430
Query: 414 VT 415
+
Sbjct: 431 LY 432
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. Length = 432 |
| >gnl|CDD|143441 cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Score = 167 bits (425), Expect = 1e-46
Identities = 132/453 (29%), Positives = 194/453 (42%), Gaps = 76/453 (16%)
Query: 1 MTAYERSKIILRFADLLE-RHNDEIAALETWDNGK-PFEQSAQTEVPMTTRL---FRYYA 55
M +R+ I L+ ADLL ++ E+ A GK + Q E+ L R+
Sbjct: 88 MPFEDRAAIFLKAADLLSGKYRYELNAATMLGQGKNVW----QAEIDAACELIDFLRFNV 143
Query: 56 GWADKIQGLTAPADGPYHVQTLHEPIGVAGQ------------IIPWNF----------P 93
+A+++ Y Q L P GV + + P+NF P
Sbjct: 144 KYAEEL----------YAQQPLSSPAGVWNRLEYRPLEGFVYAVSPFNFTAIGGNLAGAP 193
Query: 94 LLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAA 153
LM GN ++ K ++ LS V K+L EAGLPPGV+N V G GP G
Sbjct: 194 ALM-----------GNVVLWKPSDTAVLSNYLVYKILEEAGLPPGVINFVPGDGPVVGDT 242
Query: 154 LASHMEVDKLAFTGSTTT-----GKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKA 208
+ + + L FTGST T +I L + E GGK+ +V ADVD
Sbjct: 243 VLASPHLAGLHFTGSTPTFKSLWKQIGENLDRYRTYPRIVGETGGKNFHLVHPSADVDSL 302
Query: 209 AELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQID 268
F QGQ C A SR +V ES++ + E+ + +GDP G ID
Sbjct: 303 VTATVRGAFEYQGQKCSAASRAYVPESLWPEVKERLLEELKEIKMGDPDDFSNFMGAVID 362
Query: 269 SEQFEKILKYI-RSGVDGGAKLETGGERLGAKGYYIKPTVF--TGVKDDMLIAKDEIFGP 325
+ F++I YI + D A++ GG+ + GY+++PTV T K ++ +EIFGP
Sbjct: 363 EKAFDRIKGYIDHAKSDPEAEIIAGGKCDDSVGYFVEPTVIETTDPKHKLM--TEEIFGP 420
Query: 326 VQSILKYKD--LDEVIQR-SNASQYGLAAGVFTHNLDTANTLMRALR--VGSVWINCFDV 380
V ++ Y D +E ++ S Y L +F + ALR G+ +IN D
Sbjct: 421 VLTVYVYPDSDFEETLELVDTTSPYALTGAIFAQDRKAIREATDALRNAAGNFYIN--DK 478
Query: 381 FDAAI----PFGGYKQSGQGREKGSYSLSNYLQ 409
A+ PFGG + SG + GS L
Sbjct: 479 PTGAVVGQQPFGGARASGTNDKAGS---PLNLL 508
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. Length = 522 |
| >gnl|CDD|233324 TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Score = 164 bits (416), Expect = 2e-45
Identities = 128/416 (30%), Positives = 187/416 (44%), Gaps = 21/416 (5%)
Query: 4 YERSKIILRFADLLE---RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
Y+R+ I L+ ADLL R EI A K Q+ V FR+ A +A +
Sbjct: 91 YDRAAIFLKAADLLSGPYRA--EILAATMLGQSKTVYQAEIDAVAELIDFFRFNAKYARE 148
Query: 61 IQGLTAPADGPYHVQTLHEPI-GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 119
+ + +T + P+ G I P+NF + PAL GNT++ K ++
Sbjct: 149 LYEQQPISAPGEWNRTEYRPLEGFVYAISPFNFTAIAGNLAGAPALM-GNTVIWKPSDTA 207
Query: 120 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTT-----GKI 174
LS V ++L EAGLPPGV+N V G GP + + ++ + FTGST T ++
Sbjct: 208 MLSNYLVMRILEEAGLPPGVINFVPGDGPLVSDTVLADPDLAGIHFTGSTPTFKHLWKQV 267
Query: 175 VLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHE 234
L N + E GGK +V ADV+ F QGQ C A SR +V
Sbjct: 268 AQNLDRYHNFPRIVGETGGKDFHVVHPSADVEHVVSGTIRGAFEYQGQKCSACSRLYVPH 327
Query: 235 SVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLET--G 292
S++ +F + A + VGDP G G ID + F KI+KYI + L G
Sbjct: 328 SLWPRFKGRLLAELSRVKVGDPDDFGTFMGAVIDEKSFAKIVKYIEHAKSDPSALTILAG 387
Query: 293 GERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD--LDEVIQR-SNASQYGL 349
G+ + GY+++PTV + K+EIFGPV ++ Y D E++ + + YGL
Sbjct: 388 GKYDDSVGYFVEPTVVESKDPQEPLMKEEIFGPVLTVYVYPDDKYKEILDLVDSTTSYGL 447
Query: 350 AAGVFTHNLDTANTLMRALR--VGSVWIN--CFDVFDAAIPFGGYKQSGQGREKGS 401
VF + D + LR G+ +IN PFGG + SG + G
Sbjct: 448 TGAVFAKDRDAILEADKVLRFAAGNFYINDKPTGAVVGQQPFGGARASGTNDKAGG 503
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate [Energy metabolism, Amino acids and amines]. Length = 532 |
| >gnl|CDD|236989 PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 161 bits (409), Expect = 5e-43
Identities = 138/424 (32%), Positives = 198/424 (46%), Gaps = 58/424 (13%)
Query: 5 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA-DKIQG 63
ER+ I+ R ADL+E + L + GK F +A EV RYYAG D
Sbjct: 705 ERAAILERAADLMEAQMQTLMGLLVREAGKTF-SNAIAEVREAVDFLRYYAGQVRDDFDN 763
Query: 64 LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 123
T H P+G I PWNFPL +F +V ALA GN+++ K AEQTPL A
Sbjct: 764 DT------------HRPLGPVVCISPWNFPLAIFTGQVAAALAAGNSVLAKPAEQTPLIA 811
Query: 124 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ------ 177
++L EAG+P GV+ ++ G G T GAAL + V + FTGST ++ LQ
Sbjct: 812 AQAVRILLEAGVPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARL-LQRNLAGR 870
Query: 178 LAAKSNLKPVTLELGGKSPFIVCEDA-------DVDKAAELAHYALFFNQGQCCCAGSRT 230
L + P+ E GG++ IV A DV +A F + GQ C A
Sbjct: 871 LDPQGRPIPLIAETGGQNAMIVDSSALTEQVVADVLASA-------FDSAGQRCSALRVL 923
Query: 231 FVHESVYDQFVEKANALAMKR------VVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVD 284
+ + V D+ L M R +G+P + GP ID+E I ++I++
Sbjct: 924 CLQDDVADR------TLKMLRGAMAECRMGNPDRLSTDIGPVIDAEAKANIERHIQAMRA 977
Query: 285 GGAK---LETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK--DLDEVI 339
G G ++ PT+ D L K E+FGPV +++Y LDE+I
Sbjct: 978 KGRPVFQAARENSEDWQSGTFVPPTLIELDSFDEL--KREVFGPVLHVVRYNRNQLDELI 1035
Query: 340 QRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAI---PFGGYKQSGQG 396
++ NAS YGL GV T +T + + VG++++N ++ A + PFGG SG G
Sbjct: 1036 EQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVN-RNMVGAVVGVQPFGGEGLSGTG 1094
Query: 397 REKG 400
+ G
Sbjct: 1095 PKAG 1098
|
Length = 1318 |
| >gnl|CDD|177831 PLN02174, PLN02174, aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Score = 137 bits (345), Expect = 9e-36
Identities = 118/402 (29%), Positives = 184/402 (45%), Gaps = 14/402 (3%)
Query: 20 HNDEIAALETWDNGKPFEQSAQTEVPM---TTRL-FRYYAGWADKIQGLTAPADGPYHVQ 75
H EI A D GKP +S+ EV + + +L + W + T+ P +
Sbjct: 48 HEPEIVAALRDDLGKPELESSVYEVSLLRNSIKLALKQLKNWMAPEKAKTSLTTFPASAE 107
Query: 76 TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGL 135
+ EP+GV I WN+P L+ V A++ GN +VLK +E P S+ ++KLL E L
Sbjct: 108 IVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLL-EQYL 166
Query: 136 PPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKS 195
+ +V G A L + DK+ +TGS+ G++++ AAK +L PV LELGGKS
Sbjct: 167 DSSAVRVVEGAVTETTALL--EQKWDKIFYTGSSKIGRVIMAAAAK-HLTPVVLELGGKS 223
Query: 196 PFIVCEDADVDKAAELAHYALF-FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 254
P +V D D+ + N GQ C + + + ++ A ++ G
Sbjct: 224 PVVVDSDTDLKVTVRRIIAGKWGCNNGQACISPDYILTTKEYAPKVID-AMKKELETFYG 282
Query: 255 DPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDD 314
++S F+++ K + + K+ GGE+ + I PT+ V D
Sbjct: 283 KNPMESKDMSRIVNSTHFDRLSKLLDEK-EVSDKIVYGGEK-DRENLKIAPTILLDVPLD 340
Query: 315 MLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVW 374
LI +EIFGP+ IL +L+E + LAA +FTHN + G +
Sbjct: 341 SLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAATVSAGGIV 400
Query: 375 INCFDVFDA--AIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 414
+N V A +PFGG +SG G G +S + KAV+
Sbjct: 401 VNDIAVHLALHTLPFGGVGESGMGAYHGKFSFDAFSHKKAVL 442
|
Length = 484 |
| >gnl|CDD|143403 cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Score = 121 bits (306), Expect = 1e-30
Identities = 88/372 (23%), Positives = 151/372 (40%), Gaps = 29/372 (7%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
+ +R+ + R L + +IAA GK + + R + ++ +
Sbjct: 18 LALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGWMFAENICGDQVQLRARAFVIYSYR 77
Query: 61 IQGLTAPADGPYHVQTLHE---PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAE 117
I G Q H P G I +NFPL + ++ ALA GN +++K
Sbjct: 78 IPHEPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHT 137
Query: 118 QTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 176
+ + +LLH AG LPP + +++G G T AL H + FTGS+ +
Sbjct: 138 AVSIVMQIMVRLLHYAGLLPPEDVTLINGDGKT-MQALLLHPNPKMVLFTGSSRVAE--- 193
Query: 177 QLAAKSNLKPVTLELGGKSPFIVCEDAD-VDKAAELAHYALFFNQGQCCCAGSRTFVHES 235
+LA + + LEL G + ++ DA VD A + GQ C A S FV E+
Sbjct: 194 KLALDAKQARIYLELAGFNWKVLGPDAQAVDYVAWQCVQDMTACSGQKCTAQSMLFVPEN 253
Query: 236 VYDQ-FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGE 294
VEK AL +R + D G +Q + ++ ++ + G+ L G+
Sbjct: 254 WSKTPLVEKLKALLARRKLEDLLLGPVQ------TFTTLAMIAHMEN--LLGSVLLFSGK 305
Query: 295 RLGAK------GYYIKPTVFTGVKDDMLIAK---DEIFGPVQSILKYKDLDE--VIQRSN 343
L G + +F + + + + +EIFGP +++YK V++
Sbjct: 306 ELKNHSIPSIYGACVASALFVPIDEILKTYELVTEEIFGPFAIVVEYKKDQLALVLELLE 365
Query: 344 ASQYGLAAGVFT 355
L A +++
Sbjct: 366 RMHGSLTAAIYS 377
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. Length = 442 |
| >gnl|CDD|165847 PLN02203, PLN02203, aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 122 bits (308), Expect = 1e-30
Identities = 104/367 (28%), Positives = 164/367 (44%), Gaps = 45/367 (12%)
Query: 71 PYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLL 130
P + + EP+GV WNFP+ + + A+A GN +VLK +E P ++ +++ +
Sbjct: 99 PATAEVVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLAANI 158
Query: 131 HEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLE 190
L + ++ G GP G L H + DK+ FTGS G+I++ AAK +L PV LE
Sbjct: 159 -PKYLDSKAVKVIEG-GPAVGEQLLQH-KWDKIFFTGSPRVGRIIMTAAAK-HLTPVALE 214
Query: 191 LGGKSPFIV-CEDADVDK--------AAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 241
LGGK P IV + D + A GQ C A V E +
Sbjct: 215 LGGKCPCIVDSLSSSRDTKVAVNRIVGGKWGSCA-----GQACIAIDYVLVEERFAPILI 269
Query: 242 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR------SGVDGGAKLETGGER 295
E + +K+ G+ + ++ + F+++ ++ S V GG+
Sbjct: 270 ELLKST-IKKFFGENPRESKSMARILNKKHFQRLSNLLKDPRVAASIVHGGS-------- 320
Query: 296 LGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFT 355
+ K +I+PT+ D I +EIFGP+ I+ K +++ I N+ LA FT
Sbjct: 321 IDEKKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFT 380
Query: 356 HNLDTANTLMRALRVGSVWINCFDVFDA-------AIPFGGYKQSGQGREKGSYSLSNYL 408
+N ++ GSV N DA ++PFGG +SG GR G YS +
Sbjct: 381 NNEKLKRRILSETSSGSVTFN-----DAIIQYACDSLPFGGVGESGFGRYHGKYSFDTFS 435
Query: 409 QVKAVVT 415
KAV+
Sbjct: 436 HEKAVLR 442
|
Length = 484 |
| >gnl|CDD|143446 cd07128, ALDH_MaoC-N, N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Score = 108 bits (271), Expect = 1e-25
Identities = 92/315 (29%), Positives = 127/315 (40%), Gaps = 44/315 (13%)
Query: 82 GVAGQIIPWNFPLLMFAW----KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LP 136
GVA I +NFP W K PAL G +++K A T V K + E+G LP
Sbjct: 146 GVAVHINAFNFP----VWGMLEKFAPALLAGVPVIVKPATATAYLTEAVVKDIVESGLLP 201
Query: 137 PGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLK----PVTLELG 192
G L ++ G + G L E D +AFTGS T +L A N+ E
Sbjct: 202 EGALQLICG---SVGDLLDHLGEQDVVAFTGSAATAA---KLRAHPNIVARSIRFNAEAD 255
Query: 193 GKSPFIVCEDADVDKAAELAHYALFFNQ---------GQCCCAGSRTFVHESVYDQFVEK 243
+ I+ DA + LF + GQ C A R FV E+ D +E
Sbjct: 256 SLNAAILGPDATPGTPE----FDLFVKEVAREMTVKAGQKCTAIRRAFVPEARVDAVIEA 311
Query: 244 ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI---RSG---VDGGAKLETGGERLG 297
A K VVGDP G++ GP + EQ E + + + V GG
Sbjct: 312 LKARLAKVVVGDPRLEGVRMGPLVSREQREDVRAAVATLLAEAEVVFGGPDRFEVVGADA 371
Query: 298 AKGYYIKPTVFTGVKDDMLIAKD----EIFGPVQSILKYKDLDEVIQRSNASQYGLAAGV 353
KG + PT+ DD A E FGPV +++ Y L E I+ + + L A V
Sbjct: 372 EKGAFFPPTLLLC--DDPDAATAVHDVEAFGPVATLMPYDSLAEAIELAARGRGSLVASV 429
Query: 354 FTHNLDTANTLMRAL 368
T++ A L+
Sbjct: 430 VTNDPAFARELVLGA 444
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. Length = 513 |
| >gnl|CDD|237016 PRK11903, PRK11903, aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 99.8 bits (249), Expect = 1e-22
Identities = 90/343 (26%), Positives = 139/343 (40%), Gaps = 59/343 (17%)
Query: 53 YYAGWADKIQGLTAPADGP---------YHVQTLHEPI-GVAGQIIPWNFPLLMFAW--- 99
YYA + DG + Q + P GVA I +NFP AW
Sbjct: 111 YYAKLGAALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFNFP----AWGLW 166
Query: 100 -KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASH 157
K PAL G +++K A T + K + AG LP G L++V G + A L H
Sbjct: 167 EKAAPALLAGVPVIVKPATATAWLTQRMVKDVVAAGILPAGALSVVCG----SSAGLLDH 222
Query: 158 M-EVDKLAFTGSTTTGKI------VLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAE 210
+ D ++FTGS T + V+Q + + N++ +L ++ DA A
Sbjct: 223 LQPFDVVSFTGSAETAAVLRSHPAVVQRSVRVNVEADSLNSA-----LLGPDAAPGSEA- 276
Query: 211 LAHYALFFNQ---------GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 261
+ LF + GQ C A R FV E++YD E A K VG+P G+
Sbjct: 277 ---FDLFVKEVVREMTVKSGQKCTAIRRIFVPEALYDAVAEALAARLAKTTVGNPRNDGV 333
Query: 262 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG------AKGYYIKPTVFTGVKDDM 315
+ GP + Q + + + + A++ G A + PT+ G D
Sbjct: 334 RMGPLVSRAQLAAVRAGL-AALRAQAEVLFDGGGFALVDADPAVAACVGPTLL-GASDPD 391
Query: 316 ---LIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFT 355
+ E+FGPV ++L Y+D + + Q L A V++
Sbjct: 392 AATAVHDVEVFGPVATLLPYRDAAHALALARRGQGSLVASVYS 434
|
Length = 521 |
| >gnl|CDD|131331 TIGR02278, PaaN-DH, phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Score = 93.7 bits (233), Expect = 1e-20
Identities = 101/371 (27%), Positives = 156/371 (42%), Gaps = 35/371 (9%)
Query: 69 DGPYHVQTLHEPI-GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVS 127
DG + + + P GVA QI +NFP+ K PA G + K A T A +
Sbjct: 132 DGSFQGRHILTPKGGVAVQINAFNFPVWGLLEKFAPAFLAGVPTLAKPATPTAYVAEALV 191
Query: 128 KLLHEAGL-PPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLK- 185
+ + E+GL P G L ++ G +AG L D +AFTGS T +L A N+
Sbjct: 192 RTMVESGLLPEGSLQLICG---SAGDLLDHLDHRDVVAFTGSAATAD---RLRAHPNVLE 245
Query: 186 ---PVTLELGGKSPFIVCEDADVDKAAELAHYA------LFFNQGQCCCAGSRTFVHESV 236
E + I+ EDA D+ E +A L GQ C A R V +++
Sbjct: 246 RGIRFNAEADSLNAAILGEDATPDEP-EFDLFAQEIVRELTIKAGQKCTAIRRVIVPKAL 304
Query: 237 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGG-ER 295
+ ++ A K V+GDP + G+ GP + EQ + + + + GA++ GG R
Sbjct: 305 LEAVLKALQARLAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGPGR 364
Query: 296 LGAKGYYIKPTVFTGVKDDMLIAKD-EIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVF 354
L G + PT+ E FGPV + Y D E + + L A +
Sbjct: 365 L--DGAFFPPTLLLAEDPWAGAVHATEAFGPVATFFPYGDRAEAARLAARGGGSLVATLA 422
Query: 355 THNLDTANTLMRALRVGSVWINCFDVFDAA--------IP---FGGYKQSGQGREKGSY- 402
T + + A + L ++ + DAA +P GG ++G G E G
Sbjct: 423 TSDPEEARQFILGLAPYHGRLHILNRDDAAESTGHGSPLPRLLHGGPGRAGGGEELGGLR 482
Query: 403 SLSNYLQVKAV 413
S+ +Y+Q A+
Sbjct: 483 SVKHYMQRTAI 493
|
This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has domains which are members of the pfam00171 and pfam01575 families. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. Length = 663 |
| >gnl|CDD|236931 PRK11563, PRK11563, bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 89.2 bits (222), Expect = 5e-19
Identities = 92/316 (29%), Positives = 136/316 (43%), Gaps = 46/316 (14%)
Query: 82 GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LPPGVL 140
GVA I +NFP+ K+ PA G ++K A T V +L+ E+G LP G L
Sbjct: 150 GVAVHINAFNFPVWGMLEKLAPAFLAGVPAIVKPATATAYLTEAVVRLIVESGLLPEGAL 209
Query: 141 NIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC 200
++ G +AG L D + FTGS T + +L A N+ + PF
Sbjct: 210 QLICG---SAGDLLDHLDGQDVVTFTGSAATAQ---KLRAHPNV------VANSVPFTA- 256
Query: 201 EDAD--------VDKAAELAHYALFFNQ---------GQCCCAGSRTFVHESVYDQFVEK 243
+AD D + LF + GQ C A R V ++ D +E
Sbjct: 257 -EADSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRAIVPRALVDAVIEA 315
Query: 244 ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGG----ERLGA- 298
A K VVGDP G++ G EQ E + + + + + A++ GG E +GA
Sbjct: 316 LRARLAKVVVGDPRLEGVRMGALASLEQREDVREKVAALLAA-AEIVFGGPDSFEVVGAD 374
Query: 299 --KGYYIKPTVFTGVKDDMLIAKD----EIFGPVQSILKYKDLDEVIQRSNASQYGLAAG 352
KG + PT+ DD L A E FGPV +++ Y DLDE I+ + + L A
Sbjct: 375 AEKGAFFPPTLLYC--DDPLEAPAVHDVEAFGPVSTLMPYDDLDEAIELAARGKGSLVAS 432
Query: 353 VFTHNLDTANTLMRAL 368
+ T + + A L+
Sbjct: 433 LVTADPEVARELVLGA 448
|
Length = 675 |
| >gnl|CDD|143444 cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Score = 79.5 bits (196), Expect = 4e-16
Identities = 96/343 (27%), Positives = 148/343 (43%), Gaps = 39/343 (11%)
Query: 34 KPFEQSAQTEVPMTTRLFRYYAGWADKIQ----GLTAPADGPYHVQTLHE---PIGVAGQ 86
K Q A EV +T + +AG D+++ P D + Q P G
Sbjct: 94 KSDAQ-ALGEVVVTRKFLENFAG--DQVRFLARSFNVPGD--HQGQQSSGYRWPYGPVAI 148
Query: 87 IIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY 146
I P+NFPL + A ++ AL GN +LK + + +LLH G+P ++++
Sbjct: 149 ITPFNFPLEIPALQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLHLCGMPATDVDLIHSD 208
Query: 147 GPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCED-ADV 205
GPT L FTGS+ K+ +LA + + K V LE G I+ D +DV
Sbjct: 209 GPTMNKIL-LEANPRMTLFTGSS---KVAERLALELHGK-VKLEDAGFDWKILGPDVSDV 263
Query: 206 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ-FVEKANALAMKRVVGDPFKGGIQQG 264
D A + GQ C A S F HE+ ++K ALA +R + D + G
Sbjct: 264 DYVAWQCDQDAYACSGQKCSAQSILFAHENWVQAGILDKLKALAEQRKLED-----LTIG 318
Query: 265 PQIDSEQFEKILKYIRSGVD-GGAKLETGGERLGAK------GYYIKPTVFTGVKDDML- 316
P + + E+IL ++ + GAK+ GG+ L G Y VF +++ +
Sbjct: 319 P-VLTWTTERILDHVDKLLAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIE 377
Query: 317 ----IAKDEIFGPVQSILKYKD--LDEVIQRSNASQYGLAAGV 353
+ E+FGP Q + +YKD L V++ L A V
Sbjct: 378 ENFELVTTEVFGPFQVVTEYKDEQLPLVLEALERMHAHLTAAV 420
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. Length = 489 |
| >gnl|CDD|143447 cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Score = 76.4 bits (189), Expect = 4e-15
Identities = 76/311 (24%), Positives = 112/311 (36%), Gaps = 42/311 (13%)
Query: 91 NFPLLMFAWKVG-----PALACGNTIVLK-------TAEQTPLSALYVSKLLHEAGLPPG 138
NFP A+ V ALA G +V+K T+E L A + L GLP G
Sbjct: 116 NFP---LAFSVAGGDTASALAAGCPVVVKAHPAHPGTSE---LVARAIRAALRATGLPAG 169
Query: 139 VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL-KPVTLELGGKSPF 197
V +++ G G G AL H + + FTGS G+ + AA P ELG +P
Sbjct: 170 VFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNPV 229
Query: 198 IVCEDADVDKAAELA---HYALFFNQGQCCCAGSRTFVHESV-YDQFVEKANALAMKRVV 253
+ A ++ +A +L GQ C V D F+
Sbjct: 230 FILPGALAERGEAIAQGFVGSLTLGAGQFCTNPGLVLVPAGPAGDAFIAALAEALAAAPA 289
Query: 254 GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKD 313
GI + + E + G L G G PT+F V
Sbjct: 290 QTMLTPGIAEAYRQGVEA--------LAAAPGVRVLAGGAAAEGGNQA--APTLFK-VDA 338
Query: 314 DMLIAKD----EIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN--LDTANTLMRA 367
+A E+FGP +++Y D E++ + A + L A + L A L+
Sbjct: 339 AAFLADPALQEEVFGPASLVVRYDDAAELLAVAEALEGQLTATIHGEEDDLALARELLPV 398
Query: 368 L--RVGSVWIN 376
L + G + N
Sbjct: 399 LERKAGRLLFN 409
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. Length = 454 |
| >gnl|CDD|143396 cd07077, ALDH-like, NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Score = 72.6 bits (178), Expect = 6e-14
Identities = 61/257 (23%), Positives = 93/257 (36%), Gaps = 24/257 (9%)
Query: 2 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRL----------F 51
+R II A+ L +A+ + G + M
Sbjct: 14 HDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRSLIANWIAMMGCSESKLYKNIDTE 73
Query: 52 RYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTI 111
R IQ + P +G +V+ PIGV I+P PL +A N
Sbjct: 74 RGITASVGHIQDVLLPDNGETYVRA--FPIGVTMHILPSTNPLSGIT-SALRGIATRNQC 130
Query: 112 VLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA----SHMEVDKLAFTG 167
+ + P + LL +A I+ Y P LA SH ++D + TG
Sbjct: 131 IFRPHPSAPFTN-RALALLFQAADAAHGPKILVLYVPHPSDELAEELLSHPKIDLIVATG 189
Query: 168 STTTGKIVLQLAAK-SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCA 226
G+ + A K S PV G SP +V E AD ++A+ H + FF+Q C +
Sbjct: 190 ----GRDAVDAAVKHSPHIPVIGFGAGNSPVVVDETADEERASGSVHDSKFFDQ-NACAS 244
Query: 227 GSRTFVHESVYDQFVEK 243
+V + V D E+
Sbjct: 245 EQNLYVVDDVLDPLYEE 261
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 397 |
| >gnl|CDD|143400 cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Score = 48.0 bits (114), Expect = 6e-06
Identities = 42/179 (23%), Positives = 69/179 (38%), Gaps = 9/179 (5%)
Query: 69 DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVL----KTAEQTPLSAL 124
D + EPIGV I P P +K +L N+I+ + + T +A
Sbjct: 84 DENGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAAT 143
Query: 125 YVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 184
+ + AG P ++ + L + L TG K AA S+
Sbjct: 144 LLLQAAVAAGAPENLIGWIDNPSIELAQRLMKFPGIGLLLATGGPAVVK-----AAYSSG 198
Query: 185 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 243
KP G +P ++ E AD+ +A + + F+ G C + V +SVYD+ +
Sbjct: 199 KPAIGVGAGNTPVVIDETADIKRAVQSIVKSKTFDNGVICASEQSVIVVDSVYDEVMRL 257
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. Length = 439 |
| >gnl|CDD|143440 cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Score = 44.0 bits (105), Expect = 1e-04
Identities = 69/325 (21%), Positives = 126/325 (38%), Gaps = 56/325 (17%)
Query: 79 EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVL----KTAEQTPLSALYVSKLLHEAG 134
EP+GV +IP P +K AL N I+ + + + +A + + AG
Sbjct: 94 EPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAG 153
Query: 135 LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELG-- 192
P G++ + L H +VD + TG K AA S+ KP +G
Sbjct: 154 APEGLIQWIEEPSIELTQELMKHPDVDLILATGGPGMVK-----AAYSSGKPA---IGVG 205
Query: 193 -GKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR 251
G P + E AD+ +A + + F+ G C + V + +YD+ +KR
Sbjct: 206 PGNVPAYIDETADIKRAVKDIILSKTFDNGTICASEQSVIVDDEIYDEVRA-----ELKR 260
Query: 252 VVGDPFKGGIQQGPQI-DSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYI------- 303
+G + E+ EK+ K + D G L + +G I
Sbjct: 261 -----------RGAYFLNEEEKEKLEKAL---FDDGGTLN--PDIVGKSAQKIAELAGIE 304
Query: 304 --KPTVF-----TGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNA-SQYGLA---AG 352
+ T TGV + +++ E PV + + +D +E ++++ +YG A A
Sbjct: 305 VPEDTKVLVAEETGVGPEEPLSR-EKLSPVLAFYRAEDFEEALEKARELLEYGGAGHTAV 363
Query: 353 VFTHNLDTANTLMRALRVGSVWINC 377
+ +++ + + V + +N
Sbjct: 364 IHSNDEEVIEEFALRMPVSRILVNT 388
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. Length = 436 |
| >gnl|CDD|131341 TIGR02288, PaaN_2, phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Score = 41.4 bits (97), Expect = 8e-04
Identities = 56/194 (28%), Positives = 83/194 (42%), Gaps = 32/194 (16%)
Query: 90 WN-FPLLMFAWKVGPALACGNTIVLKTAEQTPLS-ALYVS---KLLHEAGLPPGVLNIVS 144
WN +P L FA +LA GN +++K L AL V ++L EAG P ++ + +
Sbjct: 208 WNTYPGL-FA-----SLATGNPVLVKPHPGAILPLALTVQVAREVLGEAGFDPNLVTLAA 261
Query: 145 GYGPTAGAA--LASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCED 202
+ P AA LA+ V + FTGS G+ + Q A ++ V E G + I+
Sbjct: 262 -FDPGHEAAQRLATDPAVRIIDFTGSNAFGQWLEQNARQAQ---VYTEKAGVNTVIIEST 317
Query: 203 ADVDKAAELAHYALFFNQGQCCCA---------GSRTFVHESVYDQFVEKANALAMKRVV 253
D ++L GQ C G RT YD+ V A A+ ++
Sbjct: 318 DDYKAMLRNLAFSLSLYSGQMCTTTQAILVPRDGIRTDQGRKSYDE-VAADLATAIDGLL 376
Query: 254 GDPFK-----GGIQ 262
GDP + G IQ
Sbjct: 377 GDPARATAVLGAIQ 390
|
This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has a domain which is a member of the pfam00171 family. This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. Length = 551 |
| >gnl|CDD|143439 cd07121, ALDH_EutE, Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Score = 39.1 bits (92), Expect = 0.004
Identities = 74/318 (23%), Positives = 123/318 (38%), Gaps = 54/318 (16%)
Query: 76 TLHE--PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEA 133
TL E P GV G I P P LA GN +V + Y +L+++A
Sbjct: 91 TLVEYAPFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKA 150
Query: 134 ----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTL 189
G P ++ V L +H +++ L TG G V++ A S K +
Sbjct: 151 IAEAGGPDNLVVTVEEPTIETTNELMAHPDINLLVVTG----GPAVVKAALSSGKKAI-- 204
Query: 190 ELG---GKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANA 246
G G P +V E AD++KAA F+ C A +SV D +
Sbjct: 205 --GAGAGNPPVVVDETADIEKAARDIVQGASFDNNLPCIAEKEVIAVDSVADYLIA---- 258
Query: 247 LAMKRVVGDPFKGGIQQGPQIDSEQFEKIL--------------KYIRSGVDGGAKLETG 292
AM+R ++ EQ E++L K++ G D L+
Sbjct: 259 -AMQR----------NGAYVLNDEQAEQLLEVVLLTNKGATPNKKWV--GKDASKILKAA 305
Query: 293 GERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGL--A 350
G + A I+ + KD + +E P+ +++ K+ DE I+ + ++G
Sbjct: 306 GIEVPAD---IRLIIVETDKDHPFVV-EEQMMPILPVVRVKNFDEAIELAVELEHGNRHT 361
Query: 351 AGVFTHNLDTANTLMRAL 368
A + + N++ + RA+
Sbjct: 362 AIIHSKNVENLTKMARAM 379
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. Length = 429 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 423 | |||
| KOG2450 | 501 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| PLN02766 | 501 | coniferyl-aldehyde dehydrogenase | 100.0 | |
| PRK11241 | 482 | gabD succinate-semialdehyde dehydrogenase I; Provi | 100.0 | |
| PLN02466 | 538 | aldehyde dehydrogenase family 2 member | 100.0 | |
| COG1012 | 472 | PutA NAD-dependent aldehyde dehydrogenases [Energy | 100.0 | |
| PLN02419 | 604 | methylmalonate-semialdehyde dehydrogenase [acylati | 100.0 | |
| KOG2451 | 503 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| cd07140 | 486 | ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydroge | 100.0 | |
| PLN02174 | 484 | aldehyde dehydrogenase family 3 member H1 | 100.0 | |
| TIGR03374 | 472 | ABALDH 1-pyrroline dehydrogenase. Members of this | 100.0 | |
| cd07113 | 477 | ALDH_PADH_NahF Escherichia coli NAD+-dependent phe | 100.0 | |
| cd07142 | 476 | ALDH_F2BC Arabidosis aldehyde dehydrogenase family | 100.0 | |
| PRK10090 | 409 | aldehyde dehydrogenase A; Provisional | 100.0 | |
| PRK13968 | 462 | putative succinate semialdehyde dehydrogenase; Pro | 100.0 | |
| PLN02278 | 498 | succinic semialdehyde dehydrogenase | 100.0 | |
| PRK09406 | 457 | gabD1 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| cd07117 | 475 | ALDH_StaphAldA1 Uncharacterized Staphylococcus aur | 100.0 | |
| cd07141 | 481 | ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydro | 100.0 | |
| PRK13252 | 488 | betaine aldehyde dehydrogenase; Provisional | 100.0 | |
| cd07559 | 480 | ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dep | 100.0 | |
| cd07143 | 481 | ALDH_AldA_AN0554 Aspergillus nidulans aldehyde deh | 100.0 | |
| TIGR01780 | 448 | SSADH succinate-semialdehyde dehydrogenase. SSADH | 100.0 | |
| TIGR03216 | 481 | OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehy | 100.0 | |
| cd07120 | 455 | ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde deh | 100.0 | |
| PLN02467 | 503 | betaine aldehyde dehydrogenase | 100.0 | |
| cd07119 | 482 | ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent be | 100.0 | |
| cd07100 | 429 | ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succi | 100.0 | |
| cd07115 | 453 | ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxy | 100.0 | |
| cd07091 | 476 | ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families | 100.0 | |
| PLN02315 | 508 | aldehyde dehydrogenase family 7 member | 100.0 | |
| cd07144 | 484 | ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyd | 100.0 | |
| cd07107 | 456 | ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde | 100.0 | |
| TIGR02299 | 488 | HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyd | 100.0 | |
| PRK13473 | 475 | gamma-aminobutyraldehyde dehydrogenase; Provisiona | 100.0 | |
| cd07097 | 473 | ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent | 100.0 | |
| cd07118 | 454 | ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydr | 100.0 | |
| cd07089 | 459 | ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric | 100.0 | |
| cd07110 | 456 | ALDH_F10_BADH Arabidopsis betaine aldehyde dehydro | 100.0 | |
| cd07109 | 454 | ALDH_AAS00426 Uncharacterized Saccharopolyspora sp | 100.0 | |
| cd07145 | 456 | ALDH_LactADH_F420-Bios Methanocaldococcus jannasch | 100.0 | |
| cd07085 | 478 | ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrog | 100.0 | |
| cd07151 | 465 | ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyd | 100.0 | |
| cd07086 | 478 | ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadip | 100.0 | |
| cd07090 | 457 | ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobuty | 100.0 | |
| cd07130 | 474 | ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic se | 100.0 | |
| cd07112 | 462 | ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent | 100.0 | |
| PRK09847 | 494 | gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen | 100.0 | |
| cd07116 | 479 | ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependen | 100.0 | |
| cd07124 | 512 | ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxyl | 100.0 | |
| cd07106 | 446 | ALDH_AldA-AAD23400 Streptomyces aureofaciens putat | 100.0 | |
| TIGR01804 | 467 | BADH glycine betaine aldehyde dehydrogenase. Betai | 100.0 | |
| cd07148 | 455 | ALDH_RL0313 Uncharacterized ALDH ( RL0313) with si | 100.0 | |
| TIGR03250 | 472 | PhnAcAld_DH putative phosphonoacetaldehyde dehydro | 100.0 | |
| cd07101 | 454 | ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succi | 100.0 | |
| cd07088 | 468 | ALDH_LactADH-AldA Escherichia coli lactaldehyde de | 100.0 | |
| cd07114 | 457 | ALDH_DhaS Uncharacterized Candidatus pelagibacter | 100.0 | |
| cd07152 | 443 | ALDH_BenzADH NAD-dependent benzaldehyde dehydrogen | 100.0 | |
| cd07123 | 522 | ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate | 100.0 | |
| TIGR01237 | 511 | D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| TIGR01236 | 533 | D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07150 | 451 | ALDH_VaniDH_like Pseudomonas putida vanillin dehyd | 100.0 | |
| cd07139 | 471 | ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehy | 100.0 | |
| cd07131 | 478 | ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuen | 100.0 | |
| cd07138 | 466 | ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric ac | 100.0 | |
| cd07102 | 452 | ALDH_EDX86601 Uncharacterized aldehyde dehydrogena | 100.0 | |
| cd07094 | 453 | ALDH_F21_LactADH-like ALDH subfamily: NAD+-depende | 100.0 | |
| PRK09457 | 487 | astD succinylglutamic semialdehyde dehydrogenase; | 100.0 | |
| PRK09407 | 524 | gabD2 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| cd07083 | 500 | ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)- | 100.0 | |
| cd07095 | 431 | ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde | 100.0 | |
| cd07099 | 453 | ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-di | 100.0 | |
| cd07092 | 450 | ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent g | 100.0 | |
| PTZ00381 | 493 | aldehyde dehydrogenase family protein; Provisional | 100.0 | |
| PRK03137 | 514 | 1-pyrroline-5-carboxylate dehydrogenase; Provision | 100.0 | |
| cd07146 | 451 | ALDH_PhpJ Streptomyces putative phosphonoformaldeh | 100.0 | |
| cd07104 | 431 | ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependen | 100.0 | |
| cd07147 | 452 | ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1 | 100.0 | |
| PF00171 | 462 | Aldedh: Aldehyde dehydrogenase family; InterPro: I | 100.0 | |
| cd07111 | 480 | ALDH_F16 Aldehyde dehydrogenase family 16A1-like. | 100.0 | |
| cd07108 | 457 | ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent a | 100.0 | |
| PLN02203 | 484 | aldehyde dehydrogenase | 100.0 | |
| cd07105 | 432 | ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-l | 100.0 | |
| cd07103 | 451 | ALDH_F5_SSADH_GabD Mitochondrial succinate-semiald | 100.0 | |
| cd07093 | 455 | ALDH_F8_HMSADH Human aldehyde dehydrogenase family | 100.0 | |
| cd07137 | 432 | ALDH_F3FHI Plant aldehyde dehydrogenase family 3 m | 100.0 | |
| TIGR01722 | 477 | MMSDH methylmalonic acid semialdehyde dehydrogenas | 100.0 | |
| cd07136 | 449 | ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydr | 100.0 | |
| cd07135 | 436 | ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde | 100.0 | |
| cd07098 | 465 | ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and | 100.0 | |
| TIGR03240 | 484 | arg_catab_astD succinylglutamic semialdehyde dehyd | 100.0 | |
| PLN00412 | 496 | NADP-dependent glyceraldehyde-3-phosphate dehydrog | 100.0 | |
| cd07133 | 434 | ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-l | 100.0 | |
| cd07125 | 518 | ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate d | 100.0 | |
| cd07128 | 513 | ALDH_MaoC-N N-terminal domain of the monoamine oxi | 100.0 | |
| cd07134 | 433 | ALDH_AlkH-like Pseudomonas putida Aldehyde dehydro | 100.0 | |
| cd07082 | 473 | ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylat | 100.0 | |
| cd07149 | 453 | ALDH_y4uC Uncharacterized ALDH (y4uC) with similar | 100.0 | |
| TIGR02278 | 663 | PaaN-DH phenylacetic acid degradation protein paaN | 100.0 | |
| cd07132 | 443 | ALDH_F3AB Aldehyde dehydrogenase family 3 members | 100.0 | |
| PRK11903 | 521 | aldehyde dehydrogenase; Provisional | 100.0 | |
| TIGR01238 | 500 | D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| PRK11904 | 1038 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| PRK11563 | 675 | bifunctional aldehyde dehydrogenase/enoyl-CoA hydr | 100.0 | |
| cd07087 | 426 | ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl | 100.0 | |
| KOG2456 | 477 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 100.0 | |
| cd07078 | 432 | ALDH NAD(P)+ dependent aldehyde dehydrogenase fami | 100.0 | |
| cd07126 | 489 | ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate de | 100.0 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| cd07129 | 454 | ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydr | 100.0 | |
| cd07084 | 442 | ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent | 100.0 | |
| cd07121 | 429 | ALDH_EutE Ethanolamine utilization protein EutE-li | 100.0 | |
| TIGR02288 | 551 | PaaN_2 phenylacetic acid degradation protein paaN. | 100.0 | |
| PRK15398 | 465 | aldehyde dehydrogenase EutE; Provisional | 100.0 | |
| cd07081 | 439 | ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldeh | 100.0 | |
| KOG2454 | 583 | consensus Betaine aldehyde dehydrogenase [Energy p | 100.0 | |
| cd07127 | 549 | ALDH_PAD-PaaZ Phenylacetic acid degradation protei | 100.0 | |
| cd07079 | 406 | ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate redu | 100.0 | |
| PRK00197 | 417 | proA gamma-glutamyl phosphate reductase; Provision | 100.0 | |
| TIGR02518 | 488 | EutH_ACDH acetaldehyde dehydrogenase (acetylating) | 100.0 | |
| PLN02418 | 718 | delta-1-pyrroline-5-carboxylate synthase | 100.0 | |
| cd07122 | 436 | ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydr | 100.0 | |
| PRK13805 | 862 | bifunctional acetaldehyde-CoA/alcohol dehydrogenas | 100.0 | |
| cd06534 | 367 | ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase s | 100.0 | |
| cd07077 | 397 | ALDH-like NAD(P)+-dependent aldehyde dehydrogenase | 100.0 | |
| COG4230 | 769 | Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene | 100.0 | |
| TIGR00407 | 398 | proA gamma-glutamyl phosphate reductase. The prosi | 100.0 | |
| TIGR01092 | 715 | P5CS delta l-pyrroline-5-carboxylate synthetase. T | 100.0 | |
| KOG2455 | 561 | consensus Delta-1-pyrroline-5-carboxylate dehydrog | 100.0 | |
| KOG2452 | 881 | consensus Formyltetrahydrofolate dehydrogenase [Nu | 100.0 | |
| KOG2453 | 507 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| COG0014 | 417 | ProA Gamma-glutamyl phosphate reductase [Amino aci | 100.0 | |
| cd07080 | 422 | ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Ac | 100.0 | |
| KOG4165 | 433 | consensus Gamma-glutamyl phosphate reductase [Amin | 99.96 | |
| PF05893 | 399 | LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR0086 | 99.85 | |
| KOG2449 | 157 | consensus Methylmalonate semialdehyde dehydrogenas | 99.49 | |
| PF07368 | 215 | DUF1487: Protein of unknown function (DUF1487); In | 99.25 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 98.67 | |
| PF00815 | 412 | Histidinol_dh: Histidinol dehydrogenase; InterPro: | 97.66 | |
| COG0141 | 425 | HisD Histidinol dehydrogenase [Amino acid transpor | 97.48 | |
| PRK00877 | 425 | hisD bifunctional histidinal dehydrogenase/ histid | 97.28 | |
| PLN02926 | 431 | histidinol dehydrogenase | 97.23 | |
| TIGR00069 | 393 | hisD histidinol dehydrogenase. This model describe | 97.18 | |
| PRK13770 | 416 | histidinol dehydrogenase; Provisional | 97.13 | |
| cd06572 | 390 | Histidinol_dh Histidinol dehydrogenase, HisD, E.C | 97.12 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 97.12 | |
| PRK12447 | 426 | histidinol dehydrogenase; Reviewed | 97.04 | |
| PRK13769 | 368 | histidinol dehydrogenase; Provisional | 96.91 | |
| COG4230 | 769 | Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene | 92.78 |
| >KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-97 Score=718.80 Aligned_cols=422 Identities=61% Similarity=1.016 Sum_probs=411.2
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
++..+|.++|+++++++++++++|+...+.+.|||..+++..++..+++.+||++.|++...+...+.+.....++.++|
T Consensus 79 ~~~~~R~~~L~~~Adlie~~~~~lA~~E~~d~GKp~~~a~~~Dl~~~~~~~ry~ag~ad~~~~~~~~~~~~~~~yt~~eP 158 (501)
T KOG2450|consen 79 RDAAERGRLLRKLADLIEQDADVLAALEVLDNGKPYPEALVSDLPPAIDCFRYYAGWADKIHGSTIPTDGEFFAYTRREP 158 (501)
T ss_pred CCHHHHHHHHHHHHHHHHhhhHHHhhhcccccCCcchhhhhcCchhhhhHHHhhccchhhcccccCCCCCceEEEecCCc
Confidence 57899999999999999999999999999999999999996799999999999999999988877777777899999999
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 160 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v 160 (423)
+||++.|.|||||+....|+++|||++||+||+||++.+|+|+..+.++++++|+|+|++|+|+|.+.+.+.+|.+|++|
T Consensus 159 ~GV~G~I~pWN~Pllm~awKlaPALa~GNtvV~Kpae~tplsal~~~~l~~eaG~P~GVvNii~G~G~~aG~al~sH~dv 238 (501)
T KOG2450|consen 159 IGVCGQIIPWNFPLLMQAWKLAPALAAGNTVVLKPAEQTPLTALYLASLCKEAGFPPGVVNIVPGSGTTAGAALASHPDV 238 (501)
T ss_pred ceeeeEeccCchHHHHHHHhhhhHHhhCcEEEecCCCCCCchHHHHHHHhHHhcCCcceEEEccCCCchHHHHHhhCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHHH
Q 014515 161 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240 (423)
Q Consensus 161 ~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~f 240 (423)
+.|+||||+.+|+.|++.+++.++||+++|+|||+|.||++|+|++.|++.+..+.|+|+||.|++.+|+|||+++||+|
T Consensus 239 ~kiaFTGSt~~G~~I~~aaa~~n~K~vtLElGGKsp~Ivf~Dadld~av~~~~~~iF~nqGq~C~a~sR~~Vqe~iydef 318 (501)
T KOG2450|consen 239 DKVAFTGSTPVGKEIMEAAAESNLKPVTLELGGKSPIIVFDDADLDLAVENAAFGIFFNQGQCCTAGSRVFVQESIYDEF 318 (501)
T ss_pred ceEEecCCCcchhHHhhhhhhcCCceeccccCCCCcceEecccchHHHHHHHHHHhhcccccccccCceeEEechHHHHH
Confidence 99999999999999999999867999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhh-cccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCcccccc
Q 014515 241 VEKANALAMK-RVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAK 319 (423)
Q Consensus 241 ~~~l~~~~~~-~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~ 319 (423)
+++++++..+ +++|||+++.+.+||.++..|++|+.+||+.++++|+++.+||.+..+.|+|+.|||+.++.++|.+++
T Consensus 319 v~~~v~~a~~~~kvGdP~~~~~~qG~~i~~~q~ekI~~yi~~~k~eGa~l~~gG~~~g~~Gyfi~Ptv~~~v~~~m~i~~ 398 (501)
T KOG2450|consen 319 VEKFVAAAKKKLKVGDPFDEGTEQGPQISKTQYEKILGYIESGKKEGATLLCGGVRLGDKGYFIKPTVFTNVTDDMRIAK 398 (501)
T ss_pred HHHHHHHHhcccccCCCCCcccccccccCHHHHHHHHHHHHHHHhcCCEEEecCcccCCCceEECCeeccCCChhhhhhH
Confidence 9999999977 999999999999999999999999999999999999999999988777899999999999999999999
Q ss_pred cccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCCCcc
Q 014515 320 DEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREK 399 (423)
Q Consensus 320 ~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~ 399 (423)
||+||||++|++|++.||+|+++|++.|||++.|||+|.++++++++++++|+||||++..+++..||||+|+||+||+.
T Consensus 399 EEIFGPVv~v~~F~t~eE~i~~AN~t~yGLAa~V~t~dl~~a~~va~~l~aGtVwiN~y~~~~~~~PfgG~K~SG~GRE~ 478 (501)
T KOG2450|consen 399 EEIFGPVVVVLKFKTEEEVIERANNTTYGLAAGVFTKDLDKAHRVANALQAGTVWINCYNVFDAQVPFGGFKMSGIGREL 478 (501)
T ss_pred hhccCceEEEEecCcHHHHHHHhcCCcccceeeEeccChHHHHHHHHHhcCceEEEeccccccccCCccccccccCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHhhheeeEEEEecCCCCC
Q 014515 400 GSYSLSNYLQVKAVVTALKNPAW 422 (423)
Q Consensus 400 g~~~l~~~~~~k~v~~~~~~~~~ 422 (423)
|.+++.+||+.|+|+++.+.++|
T Consensus 479 g~~~l~~ytevKtv~v~~~~~~~ 501 (501)
T KOG2450|consen 479 GEYGLEAYTEVKTVTVKLPQKNS 501 (501)
T ss_pred cHHHHhhcceeeEEEEeCCCCCC
Confidence 99999999999999999987776
|
|
| >PLN02766 coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-94 Score=731.84 Aligned_cols=423 Identities=55% Similarity=0.954 Sum_probs=400.1
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
+|.++|+++|+++++.|++++++|++++++|+|||..++...|+..+++.+++++..+++..++..+...+...+..++|
T Consensus 79 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P 158 (501)
T PLN02766 79 MSGFERGRIMMKFADLIEEHIEELAALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAADKIHGETLKMSRQLQGYTLKEP 158 (501)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCCCceEEEEecc
Confidence 47899999999999999999999999999999999988875699999999999998877665543332233456788999
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 160 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v 160 (423)
+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++++.+.+..|+.||++
T Consensus 159 ~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~p~v 238 (501)
T PLN02766 159 IGVVGHIIPWNFPSTMFFMKVAPALAAGCTMVVKPAEQTPLSALFYAHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDV 238 (501)
T ss_pred ceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHhcCCCcCcEEEEecCchHHHHHHhcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999777889999999999
Q ss_pred ceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHHH
Q 014515 161 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240 (423)
Q Consensus 161 ~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~f 240 (423)
|.|+||||+.+|+.|++.+++.+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|
T Consensus 239 ~~V~FTGS~~~G~~i~~~aa~~~l~~~~lElGGknp~iV~~dADl~~Aa~~i~~g~f~n~GQ~C~a~~ri~V~~si~d~f 318 (501)
T PLN02766 239 DKVSFTGSTEVGRKIMQAAATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYDEF 318 (501)
T ss_pred CEEEEECcHHHHHHHHHHhhhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHH
Confidence 99999999999999999888437899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCccccccc
Q 014515 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKD 320 (423)
Q Consensus 241 ~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~ 320 (423)
+++|+++++++++|+|.++++++||+++++++++++++|++++.+|+++++||...+..|+|++|||+.+++++|++++|
T Consensus 319 ~~~l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~e 398 (501)
T PLN02766 319 VKKLVEKAKDWVVGDPFDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGDKGYYIEPTIFTDVTEDMKIAQD 398 (501)
T ss_pred HHHHHHHHHhccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhC
Confidence 99999999999999999999999999999999999999999999999999999765456899999999999999999999
Q ss_pred ccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCCCcch
Q 014515 321 EIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKG 400 (423)
Q Consensus 321 E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g 400 (423)
|+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|.|+||+.....+.+||||+|.||+|+++|
T Consensus 399 E~FGPVl~v~~~~~~deai~~aN~~~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G 478 (501)
T PLN02766 399 EIFGPVMSLMKFKTVEEAIKKANNTKYGLAAGIVTKDLDVANTVSRSIRAGTIWVNCYFAFDPDCPFGGYKMSGFGRDQG 478 (501)
T ss_pred CccCceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCccch
Confidence 99999999999999999999999999999999999999999999999999999999877777889999999999999999
Q ss_pred HHHHHhhheeeEEEEecCCCCCC
Q 014515 401 SYSLSNYLQVKAVVTALKNPAWL 423 (423)
Q Consensus 401 ~~~l~~~~~~k~v~~~~~~~~~~ 423 (423)
.+++++||+.|++++...+.+|+
T Consensus 479 ~~~l~~ft~~k~v~~~~~~~~~~ 501 (501)
T PLN02766 479 MDALDKYLQVKSVVTPLYNSPWL 501 (501)
T ss_pred HHHHHHHhceEEEEEeccccccC
Confidence 99999999999999999999996
|
|
| >PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-93 Score=725.89 Aligned_cols=414 Identities=38% Similarity=0.666 Sum_probs=391.1
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCC-CCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|++++++|++++++|+|||+.++.. |+..+++.+++++.+.++..+...+.. .+...+.+++
T Consensus 67 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~ 145 (482)
T PRK11241 67 LTAKERANILRRWFNLMMEHQDDLARLMTLEQGKPLAEAKG-EISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQ 145 (482)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEe
Confidence 57899999999999999999999999999999999999875 999999999999988876655433321 2345678999
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccC
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 159 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~ 159 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++++++|++.+.++.|+.||+
T Consensus 146 P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gvv~vv~g~~~~~~~~l~~~~~ 225 (482)
T PRK11241 146 PIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGGELTSNPL 225 (482)
T ss_pred eceEEEEECCCcChHHHHHHHHHHHHHhCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCCchhHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999877778999999999
Q ss_pred cceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHH
Q 014515 160 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239 (423)
Q Consensus 160 v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~ 239 (423)
++.|+||||+++|+.|++.++. +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+
T Consensus 226 v~~v~FTGS~~~G~~i~~~aa~-~l~~~~lElGGknp~IV~~dADld~aa~~i~~~~f~~aGQ~C~a~~ri~V~~~i~d~ 304 (482)
T PRK11241 226 VRKLSFTGSTEIGRQLMEQCAK-DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDR 304 (482)
T ss_pred CCEEEEECcHHHHHHHHHHHHh-cCCcEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEeHHHHHH
Confidence 9999999999999999999887 789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCcccccc
Q 014515 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAK 319 (423)
Q Consensus 240 f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~ 319 (423)
|+++|+++++++++|+|.++++++||++++.+++++++++++++++|+++++||...+..|+|++|||+.+++++|.+++
T Consensus 305 f~~~l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~GG~~~~~~g~f~~Ptvl~~v~~~~~i~~ 384 (482)
T PRK11241 305 FAEKLQQAVSKLHIGDGLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHELGGNFFQPTILVDVPANAKVAK 384 (482)
T ss_pred HHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCCCCCeEEeeEEEECCCCCChhhh
Confidence 99999999999999999999999999999999999999999999999999999975434689999999999999999999
Q ss_pred cccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCCCcc
Q 014515 320 DEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREK 399 (423)
Q Consensus 320 ~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~ 399 (423)
||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.||||+.....+.+||||+|.||+|+++
T Consensus 385 eE~FGPVl~v~~~~~~~eai~~aN~s~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~ 464 (482)
T PRK11241 385 EETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREG 464 (482)
T ss_pred CcCcCCEEEEEEeCCHHHHHHHhhCCCCCceEEEEcCCHHHHHHHHHHcCccEEEECCCCCCCCCCCcCCccccccCccc
Confidence 99999999999999999999999999999999999999999999999999999999987666667899999999999999
Q ss_pred hHHHHHhhheeeEEEEe
Q 014515 400 GSYSLSNYLQVKAVVTA 416 (423)
Q Consensus 400 g~~~l~~~~~~k~v~~~ 416 (423)
|.+|+++||+.|++++.
T Consensus 465 g~~g~~~ft~~k~v~~~ 481 (482)
T PRK11241 465 SKYGIEDYLEIKYMCIG 481 (482)
T ss_pred HHHHHHHhhcceEEEEe
Confidence 99999999999998764
|
|
| >PLN02466 aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-93 Score=731.62 Aligned_cols=423 Identities=86% Similarity=1.390 Sum_probs=402.2
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
+|.++|.++|+++++.|++++++|++++++|+|||..++...|+..+++.+++++.+.++..+...+...+...+..++|
T Consensus 116 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~GK~~~~a~~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P 195 (538)
T PLN02466 116 MTAYERSRILLRFADLLEKHNDELAALETWDNGKPYEQSAKAELPMFARLFRYYAGWADKIHGLTVPADGPHHVQTLHEP 195 (538)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEec
Confidence 57899999999999999999999999999999999998866699999999999999887776655443333456889999
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 160 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v 160 (423)
+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|++.+.+..|..||++
T Consensus 196 ~GVV~~I~PwN~P~~l~~~~i~pALaaGN~VVlKPs~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v 275 (538)
T PLN02466 196 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYAAKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDV 275 (538)
T ss_pred ceEEEEECCCchHHHHHHHHHhHHHHcCCEEEeECCCCCcHHHHHHHHHHHhcCCCcccEEEEecCchhHHHHHhcCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999777889999999999
Q ss_pred ceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHHH
Q 014515 161 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240 (423)
Q Consensus 161 ~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~f 240 (423)
|.|+||||+.+|+.|++.+++.+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|
T Consensus 276 d~V~FTGS~~~G~~v~~~aa~~~l~pv~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f 355 (538)
T PLN02466 276 DKLAFTGSTDTGKIVLELAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDEF 355 (538)
T ss_pred CEEEEECCHHHHHHHHHHHHhcCCCcEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCcCcEEEEcHHHHHHH
Confidence 99999999999999999888547899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCccccccc
Q 014515 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKD 320 (423)
Q Consensus 241 ~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~ 320 (423)
+++|++++.++++|+|.|+++++||+++.++++++++++++++++|+++++||...+..|+|++|||+.+++++|++++|
T Consensus 356 ~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~i~Ptvl~~v~~d~~i~~e 435 (538)
T PLN02466 356 VEKAKARALKRVVGDPFKKGVEQGPQIDSEQFEKILRYIKSGVESGATLECGGDRFGSKGYYIQPTVFSNVQDDMLIAQD 435 (538)
T ss_pred HHHHHHHHHhccCCCCccCCCCCccCCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCceEEEEEEEecCCCCCchhcC
Confidence 99999999999999999999999999999999999999999999999999999865556899999999999999999999
Q ss_pred ccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCCCcch
Q 014515 321 EIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKG 400 (423)
Q Consensus 321 E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g 400 (423)
|+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||+.+..++.+||||+|.||+|+++|
T Consensus 436 E~FGPVl~v~~~~d~deAi~~aN~~~~GL~a~VfT~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~PfGG~k~SG~G~~~G 515 (538)
T PLN02466 436 EIFGPVQSILKFKDLDEVIRRANNTRYGLAAGVFTQNLDTANTLSRALRVGTVWVNCFDVFDAAIPFGGYKMSGIGREKG 515 (538)
T ss_pred CccCcEEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCcCCCCcCccCcccH
Confidence 99999999999999999999999999999999999999999999999999999999987777889999999999999999
Q ss_pred HHHHHhhheeeEEEEecCCCCCC
Q 014515 401 SYSLSNYLQVKAVVTALKNPAWL 423 (423)
Q Consensus 401 ~~~l~~~~~~k~v~~~~~~~~~~ 423 (423)
.+|+++|++.|++++.++++.|+
T Consensus 516 ~~gl~~ft~~k~v~~~~~~~~~~ 538 (538)
T PLN02466 516 IYSLNNYLQVKAVVTPLKNPAWL 538 (538)
T ss_pred HHHHHHhcceEEEEEeCCCCCCC
Confidence 99999999999999999999996
|
|
| >COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-93 Score=715.46 Aligned_cols=413 Identities=49% Similarity=0.808 Sum_probs=392.5
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
+|..+|.++|+++++.|+++.++|++++++|+|||+.+++. |+..+++.++|++..+++..+...+...+...+++++|
T Consensus 55 ~~~~eR~~iL~~~a~~l~~~~~ela~~~~~e~Gk~i~ea~~-ei~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P 133 (472)
T COG1012 55 LSAEERAAILRRIADLLEARAEELAALITLETGKPISEARG-EIARAADFIRYYAEEARRLEGETIPTDKGSKALVRREP 133 (472)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccCCCCCcceEEEeec
Confidence 57899999999999999999999999999999999999987 69999999999999998777765443336788999999
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 160 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v 160 (423)
+|||++|+|||||++..++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|.+.+.++.|+.||+|
T Consensus 134 ~GVv~~I~PwNfP~~~~~~k~apALaaGntVV~KPse~tp~sa~~l~~~~~~aglP~Gv~nvv~g~~~~~g~~l~~~p~v 213 (472)
T COG1012 134 LGVVGAITPWNFPLALAAWKLAPALAAGNTVVLKPSEQTPLSALALAELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDV 213 (472)
T ss_pred ceEEEEECCCCCHHHHHHhhHHHHHHcCCEEEEECcccCcHHHHHHHHHHHHhCCCCCeEEEEeCCCchHHHHHhcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999777799999999999
Q ss_pred ceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHHH
Q 014515 161 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240 (423)
Q Consensus 161 ~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~f 240 (423)
++|+||||+.+|+.|++.+++ ++||+++|+|||||+||++|||++.|++.+++++|+|+||.|++++|+|||+++||+|
T Consensus 214 ~~i~FTGSt~~G~~i~~~Aa~-~~k~~~lELGGk~p~IV~~dAdl~~Av~~~~~g~f~n~GQ~C~a~~R~~V~~~v~d~f 292 (472)
T COG1012 214 DAISFTGSTAVGRAIAAAAAA-NLKPVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEF 292 (472)
T ss_pred CEEEEECChHHHHHHHHHHhh-cCCcEEEECCCCCCeEECCCCCHHHHHHHHHHHHHhCCCCCccCCeEEEEehhhHHHH
Confidence 999999999999999999997 8999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhh-cccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCcccccc
Q 014515 241 VEKANALAMK-RVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAK 319 (423)
Q Consensus 241 ~~~l~~~~~~-~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~ 319 (423)
+++|.++ ++ +++||+.|+++++||+++.+++++++++|++++++|++++.||+. .. |+|++|||+.+++++|++++
T Consensus 293 ~~~l~~~-~~~l~~Gd~~d~~t~~Gpli~~~~~~~v~~~i~~a~~~G~~~~~Gg~~-~~-g~~~~PTv~~~v~~~~~i~~ 369 (472)
T COG1012 293 VERLVAR-AASLKVGDPLDPSTDLGPLISEEQLDRVEGYIEDAVAEGARLLAGGKR-PG-GYFVEPTILEGVTPDMRIAR 369 (472)
T ss_pred HHHHHHH-HhcCCCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCcC-CC-CeEECCEEEecCCCCChhhh
Confidence 9999999 66 899999999999999999999999999999999999999999983 33 99999999999999999999
Q ss_pred cccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcC--CCCCCCCCCCCCCCCCCC
Q 014515 320 DEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFD--VFDAAIPFGGYKQSGQGR 397 (423)
Q Consensus 320 ~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~--~~~~~~pfgG~~~SG~g~ 397 (423)
||+||||++|++|+|+||||+++|++.|||+++|||+|..++.++++++++|+|+||++. ...+.+||||+|.||+|+
T Consensus 370 eEiFGPVl~v~~~~~~dEAi~lAN~t~yGL~a~v~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~~~PFGG~k~SG~G~ 449 (472)
T COG1012 370 EEIFGPVLPVIRFKDEEEAIELANDTEYGLAAAIFTRDLARAFRVARRLEAGMVGINDYTGGADIAYLPFGGVKQSGLGR 449 (472)
T ss_pred ccccCCceEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhcCCeeEEEECCCCCCCCCCCCCCCCcccccCCc
Confidence 999999999999999999999999999999999999999999999999999999999875 345679999999999999
Q ss_pred cchHHHHHhhheeeEEEEecC
Q 014515 398 EKGSYSLSNYLQVKAVVTALK 418 (423)
Q Consensus 398 ~~g~~~l~~~~~~k~v~~~~~ 418 (423)
++|.+++++|++.|++.....
T Consensus 450 ~~g~~~~~~~~~~k~v~~~~~ 470 (472)
T COG1012 450 EGGKYGLEEFTEVKTVTIKLG 470 (472)
T ss_pred cchHHHHHHHhcceEEEEecC
Confidence 999999999999999987753
|
|
| >PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-91 Score=717.97 Aligned_cols=415 Identities=31% Similarity=0.442 Sum_probs=389.2
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCC-CCCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 79 (423)
+|.++|+++|+++++.|++++++|++++++|+|||+.++.. |+..+++.+++++.+++...+...+. ..+...+++++
T Consensus 170 ~~~~eR~~iL~k~a~~L~~~~~ela~~~~~E~GKp~~ea~~-EV~~~i~~~~~~a~~a~~~~g~~~~~~~~~~~~~~~re 248 (604)
T PLN02419 170 TPITTRQRVMLKFQELIRKNMDKLAMNITTEQGKTLKDSHG-DIFRGLEVVEHACGMATLQMGEYLPNVSNGVDTYSIRE 248 (604)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhhCCcccccCCCccceEEec
Confidence 57899999999999999999999999999999999999885 99999999999998887666544332 23445678999
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccC
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 159 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~ 159 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|+ .+.++.|+.|++
T Consensus 249 P~GVV~~I~PwNfPl~l~~~~iapALaAGNtVVlKPSe~tp~ta~~l~~l~~eAGlP~GvvnvV~G~-~~~~~~L~~~~~ 327 (604)
T PLN02419 249 PLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVILAELAMEAGLPDGVLNIVHGT-NDTVNAICDDED 327 (604)
T ss_pred CccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHhCcCcceEEEEeCC-hHHHHHHHhCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999985 467888999999
Q ss_pred cceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHH
Q 014515 160 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239 (423)
Q Consensus 160 v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~ 239 (423)
|++|+||||+.+|+.|++.++. +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++ +|+
T Consensus 328 Vd~V~FTGSt~vG~~I~~~Aa~-~lk~v~LELGGknp~IV~~DADld~Aa~~iv~g~f~naGQ~C~A~~Rv~V~~~-~d~ 405 (604)
T PLN02419 328 IRAVSFVGSNTAGMHIYARAAA-KGKRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGD-AKS 405 (604)
T ss_pred CCEEEEeCChHHHHHHHHHHhc-cCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhhCCCCcCCCCEEEEeCc-HHH
Confidence 9999999999999999999887 78999999999999999999999999999999999999999999999999999 899
Q ss_pred HHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccc---C-CCCceeecEEEecCCCcc
Q 014515 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL---G-AKGYYIKPTVFTGVKDDM 315 (423)
Q Consensus 240 f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~---~-~~g~~~~Ptvl~~~~~~~ 315 (423)
|+++|+++++++++|+|.|+++++||++++.+++++.++|++++++|+++++||... + ..|+|++|||+.+++++|
T Consensus 406 f~e~l~~~~~~l~vG~p~d~~t~~GPlis~~~~~~v~~~i~~A~~~GAkvl~GG~~~~~~~~~~G~f~~PTVL~~v~~d~ 485 (604)
T PLN02419 406 WEDKLVERAKALKVTCGSEPDADLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDM 485 (604)
T ss_pred HHHHHHHHHHHhccCCCCCCCCCccCCCCHHHHHHHHHHHHHHHhcCCEEEeCCccccCCCCCCCeEEeeEEEeCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999742 1 358999999999999999
Q ss_pred cccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcC-CCCCCCCCCCCCCCC
Q 014515 316 LIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFD-VFDAAIPFGGYKQSG 394 (423)
Q Consensus 316 ~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~-~~~~~~pfgG~~~SG 394 (423)
.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|.|+||+.. ...+.+||||+|.||
T Consensus 486 ~i~~eEiFGPVl~V~~~~~~dEAI~laN~s~yGLaasVfT~d~~~a~~~a~~l~aG~V~IN~~~~~~~~~~PFGG~k~SG 565 (604)
T PLN02419 486 ECYKEEIFGPVLVCMQANSFDEAISIINKNKYGNGAAIFTSSGAAARKFQMDIEAGQIGINVPIPVPLPFFSFTGNKASF 565 (604)
T ss_pred HHHcCCCcCCEEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCcCCcCcCC
Confidence 9999999999999999999999999999999999999999999999999999999999999863 334679999999999
Q ss_pred CC--CcchHHHHHhhheeeEEEEecCC
Q 014515 395 QG--REKGSYSLSNYLQVKAVVTALKN 419 (423)
Q Consensus 395 ~g--~~~g~~~l~~~~~~k~v~~~~~~ 419 (423)
+| +++|.+|+++|++.|+|+++.++
T Consensus 566 ~G~~~~~G~~gl~~ft~~K~v~~~~~~ 592 (604)
T PLN02419 566 AGDLNFYGKAGVDFFTQIKLVTQKQKD 592 (604)
T ss_pred CCCCcccHHHHHHHhhCeEEEEEccCC
Confidence 99 79999999999999999988754
|
|
| >KOG2451 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-92 Score=653.18 Aligned_cols=414 Identities=40% Similarity=0.671 Sum_probs=396.0
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCC-CCCCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP-ADGPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 79 (423)
++..+|.++|+++.++|.+|.|+|++++++|.|||+.|++. |+.-+..+++||+..+++..+...+ .....+..+.++
T Consensus 80 ~takeRs~lLrkwy~Li~en~ddLa~iiTlE~GKpL~eA~g-Ev~y~a~f~eWyAeEA~RvyGdii~s~~~~rr~i~ikQ 158 (503)
T KOG2451|consen 80 LTAKERSALLRKWYELIMENKDDLATIITLENGKPLGEAKG-EVAYSAAFFEWYAEEARRVYGDIIPSLNPNRRLIVIKQ 158 (503)
T ss_pred CCHHHHHHHHHHHHHHHHhchHHHHHHHhhhcCCchhhccc-eeehhHHHHHHHHHHhhhhhccccCCCCCCceEEEEec
Confidence 46789999999999999999999999999999999999986 9999999999999999999988765 334577889999
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCC---chhHHHHhhc
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY---GPTAGAALAS 156 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~---~~~~~~~l~~ 156 (423)
|+||+++|+|||||...+..+..+||++||+||+|||+.+|+++..++++..++|+|+|++|+++.+ ..++++.|+.
T Consensus 159 PvGV~alItPWNFP~AMItRK~gAALAaGCTvVvkPs~~TPlsaLala~lA~~AGiP~Gv~NVit~~~~~a~eig~~lct 238 (503)
T KOG2451|consen 159 PVGVVALITPWNFPAAMITRKAGAALAAGCTVVVKPSEDTPLSALALAKLAEEAGIPAGVLNVITADASNAAEIGKELCT 238 (503)
T ss_pred cceeEEEecCcCChHHHHHhHHHHHHhcCceEEEccCCCCchHHHHHHHHHHHcCCCCcceEEEecCCCChHHHHHHhhc
Confidence 9999999999999999999999999999999999999999999999999999999999999999963 4589999999
Q ss_pred ccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCcc
Q 014515 157 HMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 236 (423)
Q Consensus 157 ~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~ 236 (423)
+|.|+.|+||||+.+|+.++.+.+. ..|++.+||||+.|+||++|||+|.|++....++|.++||.|.+++|+|||+++
T Consensus 239 sp~VrkisFTGST~VGKiL~~qsas-tvKkvslELGGNAPfIVFddadld~Av~g~mA~KFr~~GQtCVcaNR~yVh~~i 317 (503)
T KOG2451|consen 239 SPDVRKISFTGSTNVGKILMAQSAS-TVKKVSLELGGNAPFIVFDDADLDQAVEGAMACKFRNSGQTCVCANRVYVHDSI 317 (503)
T ss_pred CCceeeEEeeccchHHHHHHHhhhh-hhhheehhhcCCCceEEecCcCHHHHHHHHHHhhhccCCceeEecceeEEehhh
Confidence 9999999999999999999999887 899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccc-CCCCceeecEEEecCCCcc
Q 014515 237 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL-GAKGYYIKPTVFTGVKDDM 315 (423)
Q Consensus 237 ~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~-~~~g~~~~Ptvl~~~~~~~ 315 (423)
||+|+.+|.++++++++||.+|++++.||+++..+.+++..++++|+.+|+++++||+.. +-..+|++|||+.+++.+|
T Consensus 318 yD~Fv~~l~e~vkkl~vGdG~~~~tt~GpLIne~av~Kve~~v~DAvsKga~ii~GGk~~~~lg~~fyePTvl~~V~~~m 397 (503)
T KOG2451|consen 318 YDKFVSKLAEAVKKLKVGDGLDPGTTQGPLINEKAVEKVEKHVEDAVSKGAKIILGGKERSELGPTFYEPTVLSNVTQNM 397 (503)
T ss_pred HHHHHHHHHHHHHheeccCCCCCCCccCCccCHHHHHHHHHHHHHHHhcCCeEEeCCeEccccCCccccceEeecCCccc
Confidence 999999999999999999999999999999999999999999999999999999999944 4455999999999999999
Q ss_pred cccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCC
Q 014515 316 LIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 395 (423)
Q Consensus 316 ~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~ 395 (423)
-+.+||+|||+.+|++|+++||+|+++|+++.||+.|+||+|..+..+++.+|++|.|-+|.--..+...||||+|+||+
T Consensus 398 ~~s~eEtFGPla~v~kFdteeEvi~~ANdt~vGLAgYvfs~~~s~~~rVae~LEvGmVGvNeglis~~~~pFGGVKeSG~ 477 (503)
T KOG2451|consen 398 LVSSEETFGPLASVFKFDTEEEVIEWANDTRVGLAGYVFSNNLSRLFRVAEALEVGMVGVNEGLISDAEAPFGGVKESGF 477 (503)
T ss_pred eeeccccccccceeeeeCCHHHHHHHhccCccceeeEEeccCHHHHHHHHHHHhcceeecccceecccccCcCCcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999998666778899999999999
Q ss_pred CCcchHHHHHhhheeeEEEEe
Q 014515 396 GREKGSYSLSNYLQVKAVVTA 416 (423)
Q Consensus 396 g~~~g~~~l~~~~~~k~v~~~ 416 (423)
||+++.+|+++|+..|++++.
T Consensus 478 GREgskyGidey~~ik~icig 498 (503)
T KOG2451|consen 478 GREGSKYGIDEYLVIKYICIG 498 (503)
T ss_pred Cccccccchhhhhhhheeeec
Confidence 999999999999999998875
|
|
| >cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-91 Score=710.57 Aligned_cols=416 Identities=45% Similarity=0.818 Sum_probs=392.4
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCC----CCCceeE
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD----GPYHVQT 76 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~ 76 (423)
+|.++|+++|+++++.|++++++|++++++|+|||..++...|+..+++.+++++.+.++..+...+.. .+...+.
T Consensus 64 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~ 143 (486)
T cd07140 64 MNARDRGRLMYRLADLMEEHQEELATIESLDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGKTIPINQARPNRNLTLT 143 (486)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEE
Confidence 578999999999999999999999999999999999998656999999999999998877765443321 2224678
Q ss_pred eeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhc
Q 014515 77 LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALAS 156 (423)
Q Consensus 77 ~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~ 156 (423)
+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++++++|++.+.++.|+.
T Consensus 144 ~r~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~ 223 (486)
T cd07140 144 KREPIGVCGIVIPWNYPLMMLAWKMAACLAAGNTVVLKPAQVTPLTALKFAELTVKAGFPKGVINILPGSGSLVGQRLSD 223 (486)
T ss_pred EeeccceEEEEcCCchHHHHHHHHHHHHHHhCCEEEEECCccCcHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999877788999999
Q ss_pred ccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCcc
Q 014515 157 HMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 236 (423)
Q Consensus 157 ~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~ 236 (423)
||+|+.|+||||+.+|+.|++.++..+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++
T Consensus 224 ~~~v~~v~ftGs~~~g~~i~~~aa~~~l~~v~lElGGk~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~i 303 (486)
T cd07140 224 HPDVRKLGFTGSTPIGKHIMKSCAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESI 303 (486)
T ss_pred CCCCCEEEEECcHHHHHHHHHHHHhcCCCeEEEEcCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHH
Confidence 99999999999999999999998854789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCccc
Q 014515 237 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDML 316 (423)
Q Consensus 237 ~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~ 316 (423)
+|+|+++|++++.++++|+|.++++++||+++.++++++.++|++++++|+++++||...+..|+|++|||+.++++++.
T Consensus 304 ~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~ 383 (486)
T cd07140 304 HDEFVRRVVEEVKKMKIGDPLDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQVDRPGFFFEPTVFTDVEDHMF 383 (486)
T ss_pred HHHHHHHHHHHHHhCCccCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeECCEEEeCCCCCCh
Confidence 99999999999999999999999999999999999999999999999999999999976555689999999999999999
Q ss_pred ccccccccCeeEEEecC--CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCC
Q 014515 317 IAKDEIFGPVQSILKYK--DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSG 394 (423)
Q Consensus 317 ~~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG 394 (423)
+++||+||||++|++|+ |++|||+++|+++|||++||||+|.++++++++++++|.|+||+++...+.+||||+|+||
T Consensus 384 i~~eE~FGPvl~v~~~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG 463 (486)
T cd07140 384 IAKEESFGPIMIISKFDDGDVDGVLQRANDTEYGLASGVFTKDINKALYVSDKLEAGTVFVNTYNKTDVAAPFGGFKQSG 463 (486)
T ss_pred hhhCCCCCCeEEEEEcCCCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCc
Confidence 99999999999999998 6999999999999999999999999999999999999999999987777789999999999
Q ss_pred CCCcchHHHHHhhheeeEEEEe
Q 014515 395 QGREKGSYSLSNYLQVKAVVTA 416 (423)
Q Consensus 395 ~g~~~g~~~l~~~~~~k~v~~~ 416 (423)
+|+++|.+|+++||+.|+++++
T Consensus 464 ~G~~~G~~~l~~ft~~k~v~~~ 485 (486)
T cd07140 464 FGKDLGEEALNEYLKTKTVTIE 485 (486)
T ss_pred CCCcchHHHHHHhhcEEEEEEe
Confidence 9999999999999999999875
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. |
| >PLN02174 aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-91 Score=704.14 Aligned_cols=409 Identities=28% Similarity=0.415 Sum_probs=379.4
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcC----ccCCCCCCCceeE
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG----LTAPADGPYHVQT 76 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~ 76 (423)
+|.++|.++|+++++.|++|.++|++++++|+|||..++...|+..+++.++|+++..++..+ .......+...++
T Consensus 29 ~~~~~R~~~L~~~a~~l~~~~~ela~~l~~e~GKp~~~a~~~Ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (484)
T PLN02174 29 RGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPELESSVYEVSLLRNSIKLALKQLKNWMAPEKAKTSLTTFPASAEI 108 (484)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccCCcceEE
Confidence 578999999999999999999999999999999999988766999999999999987766544 2111222345688
Q ss_pred eeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhc
Q 014515 77 LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALAS 156 (423)
Q Consensus 77 ~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~ 156 (423)
.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.+ ++|+|++++++|. .+.+..|+.
T Consensus 109 ~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPse~tp~~~~~l~~l~~~-~lp~gvv~vv~G~-~~~~~~l~~ 186 (484)
T PLN02174 109 VSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLLEQ-YLDSSAVRVVEGA-VTETTALLE 186 (484)
T ss_pred EEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHH-hCCCCEEEEEECC-hHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999 6999999999984 445667776
Q ss_pred ccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHH-hccCCcccCCCeEEEeCc
Q 014515 157 HMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF-FNQGQCCCAGSRTFVHES 235 (423)
Q Consensus 157 ~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~-~~~Gq~C~a~~~v~V~~~ 235 (423)
+++|+|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|+|++.|++.+++++| .|+||.|++++|||||++
T Consensus 187 -~~vd~V~FTGS~~~G~~I~~~aa~-~l~~v~LELGGk~p~iV~~dADl~~Aa~~i~~g~f~~n~GQ~C~a~~rv~V~~~ 264 (484)
T PLN02174 187 -QKWDKIFYTGSSKIGRVIMAAAAK-HLTPVVLELGGKSPVVVDSDTDLKVTVRRIIAGKWGCNNGQACISPDYILTTKE 264 (484)
T ss_pred -ccCCEEEEECChHHHHHHHHHHHh-cCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHhhCCCCCCCCcCcEEEEeHH
Confidence 899999999999999999999987 89999999999999999999999999999999999 699999999999999999
Q ss_pred cHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCcc
Q 014515 236 VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDM 315 (423)
Q Consensus 236 ~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~ 315 (423)
++|+|+++|+++++++++|+|.+ ++++||++++.+++++.++|+++ .+|+++++||.. +..|+|++|||+.+++++|
T Consensus 265 i~d~f~~~l~~~~~~~~~G~p~~-~~~~Gpli~~~~~~~v~~~i~~a-~~ga~~~~GG~~-~~~g~~~~PTvl~~v~~~~ 341 (484)
T PLN02174 265 YAPKVIDAMKKELETFYGKNPME-SKDMSRIVNSTHFDRLSKLLDEK-EVSDKIVYGGEK-DRENLKIAPTILLDVPLDS 341 (484)
T ss_pred HHHHHHHHHHHHHHhhcCCCCcc-cCCcCCCCCHHHHHHHHHHHHHH-HcCCEEEECCCc-CCCCCEEEEEEEecCCCCC
Confidence 99999999999999999999988 78999999999999999999998 779999999975 3468999999999999999
Q ss_pred cccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCC--CCCCCCCCCCC
Q 014515 316 LIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFD--AAIPFGGYKQS 393 (423)
Q Consensus 316 ~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~--~~~pfgG~~~S 393 (423)
.+++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||++.... +.+||||+|+|
T Consensus 342 ~i~~eEiFGPVl~v~~~~~~~eai~~aN~~~~gLaa~vft~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~~PfGG~k~S 421 (484)
T PLN02174 342 LIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAATVSAGGIVVNDIAVHLALHTLPFGGVGES 421 (484)
T ss_pred hhhcCCcCCCeEEEecCCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHcCCcceEEECCCcCCCCCCCCCCCCcCcc
Confidence 9999999999999999999999999999999999999999999999999999999999999875433 67899999999
Q ss_pred CCCCcchHHHHHhhheeeEEEEe
Q 014515 394 GQGREKGSYSLSNYLQVKAVVTA 416 (423)
Q Consensus 394 G~g~~~g~~~l~~~~~~k~v~~~ 416 (423)
|+|+++|.+|+++||+.|+|++.
T Consensus 422 G~Gr~~G~~gl~~ft~~K~v~~~ 444 (484)
T PLN02174 422 GMGAYHGKFSFDAFSHKKAVLYR 444 (484)
T ss_pred ccCccchHHHHHHhcceEEEEEC
Confidence 99999999999999999999876
|
|
| >TIGR03374 ABALDH 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-91 Score=706.20 Aligned_cols=414 Identities=37% Similarity=0.655 Sum_probs=389.1
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCC-CCCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 79 (423)
+|.++|+++|+++++.|++++++|++++++|+|||..++...|+..+++.+++++...+.+.+...+. ..+...++.++
T Consensus 57 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (472)
T TIGR03374 57 TTPKARAECLLKLADVIEENAQVFAELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSGLAAGEYLEGHTSMIRRD 136 (472)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCccCCCceEEEEEe
Confidence 57899999999999999999999999999999999988865699999999999998776655432221 12345688999
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccC
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 159 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~ 159 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++ +|+|++|+++|++.+.++.|+.||+
T Consensus 137 P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~-lP~gv~~~v~g~~~~~~~~L~~~~~ 215 (472)
T TIGR03374 137 PLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHEK 215 (472)
T ss_pred cceEEEEECCCCchHHHHHHHHHHHHhcCCEEEecCCCCCCHHHHHHHHHHHHh-CCcCeEEEEecCchhHHHHHhcCCC
Confidence 999999999999999999999999999999999999999999999999999985 9999999999977788999999999
Q ss_pred cceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHH
Q 014515 160 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239 (423)
Q Consensus 160 v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~ 239 (423)
+|+|+||||+++|+.|++.+++ +++|+++|+|||||+||++|+|++.|++.+++++|+|+||.|+++++||||++++|+
T Consensus 216 v~~V~fTGS~~~G~~i~~~aa~-~~~~~~lElGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~ 294 (472)
T TIGR03374 216 VRMVSLTGSIATGEHILSHTAP-SIKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDT 294 (472)
T ss_pred cCEEEEECCHHHHHHHHHHHhh-cccceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCccccCCEEEEcHHHHHH
Confidence 9999999999999999999887 789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCC-CEEEeCCcccCCCCceeecEEEecCCCccccc
Q 014515 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG-AKLETGGERLGAKGYYIKPTVFTGVKDDMLIA 318 (423)
Q Consensus 240 f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~g-a~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~ 318 (423)
|+++|++++.++++|+|.++++++||+++..++++++++|++++++| +++++||...+..|+|+.|||+.+++++|+++
T Consensus 295 f~~~l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~ 374 (472)
T TIGR03374 295 LVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKGNGYYFAPTLLAGAKQDDAIV 374 (472)
T ss_pred HHHHHHHHHhcCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHcCCeEEEeCCccCCCCCeEEeeEEEeCCCCCChhh
Confidence 99999999999999999999999999999999999999999999999 79999997654468999999999999999999
Q ss_pred ccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCCCc
Q 014515 319 KDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGRE 398 (423)
Q Consensus 319 ~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~ 398 (423)
+||+||||++|++|+|.|||++++|+++|||++||||+|.+++.++++++++|.|+||+.....+.+||||+|.||+|++
T Consensus 375 ~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~ 454 (472)
T TIGR03374 375 QKEVFGPVVSITSFDDEEQVVNWANDSQYGLASSVWTKDVGRAHRLSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKD 454 (472)
T ss_pred hCCccCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCccCcc
Confidence 99999999999999999999999999999999999999999999999999999999998777778899999999999999
Q ss_pred chHHHHHhhheeeEEEEe
Q 014515 399 KGSYSLSNYLQVKAVVTA 416 (423)
Q Consensus 399 ~g~~~l~~~~~~k~v~~~ 416 (423)
+|.+|+++||+.|+++++
T Consensus 455 ~g~~~l~~~t~~k~i~~~ 472 (472)
T TIGR03374 455 MSLYGLEDYTVVRHIMVK 472 (472)
T ss_pred chHHHHHHhhceEEEEEC
Confidence 999999999999998753
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. |
| >cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-90 Score=707.76 Aligned_cols=414 Identities=42% Similarity=0.716 Sum_probs=390.2
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCC------CCCCce
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA------DGPYHV 74 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~------~~~~~~ 74 (423)
+|.++|.++|+++++.|++++++|++++++|+|||..+++..|+..+++.+++++.++....+...+. ..+...
T Consensus 57 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (477)
T cd07113 57 TTPAERGRILLRLADLIEQHGEELAQLETLCSGKSIHLSRAFEVGQSANFLRYFAGWATKINGETLAPSIPSMQGERYTA 136 (477)
T ss_pred CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccCCCceE
Confidence 57899999999999999999999999999999999999875699999999999998887665543211 112356
Q ss_pred eEeeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHh
Q 014515 75 QTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAAL 154 (423)
Q Consensus 75 ~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l 154 (423)
+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++++. .+..|
T Consensus 137 ~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VvlKPs~~tp~~~~~l~~~~~~aglP~gvv~~v~g~~~-~~~~L 215 (477)
T cd07113 137 FTRREPVGVVAGIVPWNFSVMIAVWKIGAALATGCTIVIKPSEFTPLTLLRVAELAKEAGIPDGVLNVVNGKGA-VGAQL 215 (477)
T ss_pred EEEEeecceEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCcCCCcEEEEecCch-HHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999998666 88999
Q ss_pred hcccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeC
Q 014515 155 ASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHE 234 (423)
Q Consensus 155 ~~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~ 234 (423)
+.||++|+|+||||+++|+.|.+.++. +++|+++|+||+||+||++|||++.|++.+++++|.|+||.|+++++||||+
T Consensus 216 ~~~~~v~~V~fTGS~~~G~~i~~~aa~-~~~~~~lElGGkn~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~ 294 (477)
T cd07113 216 ISHPDVAKVSFTGSVATGKKIGRQAAS-DLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHR 294 (477)
T ss_pred hcCCCCCEEEEECcHHHHHHHHHHHHh-hcCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCcCCcEEEECH
Confidence 999999999999999999999999887 7899999999999999999999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCc
Q 014515 235 SVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDD 314 (423)
Q Consensus 235 ~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~ 314 (423)
+++|+|+++|+++++++++|+|.|+++++||++++.+++++.++|++++++|+++++||...+..|+|++|||+.+++++
T Consensus 295 ~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~v~~~ 374 (477)
T cd07113 295 SKFDELVTKLKQALSSFQVGSPMDESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALAGEGYFVQPTLVLARSAD 374 (477)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeEeCEEEecCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999765446899999999999999
Q ss_pred ccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCC
Q 014515 315 MLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSG 394 (423)
Q Consensus 315 ~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG 394 (423)
+.++++|+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++...+.+||||+|.||
T Consensus 375 ~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG 454 (477)
T cd07113 375 SRLMREETFGPVVSFVPYEDEEELIQLINDTPFGLTASVWTNNLSKALRYIPRIEAGTVWVNMHTFLDPAVPFGGMKQSG 454 (477)
T ss_pred ChHHhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999877777889999999999
Q ss_pred CCCcchHHHHHhhheeeEEEEe
Q 014515 395 QGREKGSYSLSNYLQVKAVVTA 416 (423)
Q Consensus 395 ~g~~~g~~~l~~~~~~k~v~~~ 416 (423)
+|+++|.+++++||+.|+|+++
T Consensus 455 ~G~~~g~~~l~~~t~~k~v~~~ 476 (477)
T cd07113 455 IGREFGSAFIDDYTELKSVMIR 476 (477)
T ss_pred CCccchHHHHHHhhceEEEEEe
Confidence 9999999999999999999765
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. |
| >cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-90 Score=707.10 Aligned_cols=414 Identities=79% Similarity=1.309 Sum_probs=392.1
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++...|+..+++.+++++.+.++..+...+...+...+..++|
T Consensus 62 ~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P 141 (476)
T cd07142 62 MTGYERSRILLRFADLLEKHADELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWADKIHGMTLPADGPHHVYTLHEP 141 (476)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEec
Confidence 47899999999999999999999999999999999998865699999999999999887766654443323456788999
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 160 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v 160 (423)
+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++.+.+..|..||++
T Consensus 142 ~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v 221 (476)
T cd07142 142 IGVVGQIIPWNFPLLMFAWKVGPALACGNTIVLKPAEQTPLSALLAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDV 221 (476)
T ss_pred eeeEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcccHHHHHHHHHHHHcCcCcccEEEEeCCchhHHHHHhcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999777789999999999
Q ss_pred ceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHHH
Q 014515 161 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240 (423)
Q Consensus 161 ~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~f 240 (423)
|.|+||||+.+|+.|++.+++.+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|
T Consensus 222 ~~v~fTGs~~~G~~v~~~aa~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f 301 (476)
T cd07142 222 DKVAFTGSTEVGKIIMQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDEF 301 (476)
T ss_pred CEEEEECcHHHHHHHHHHHHHcCCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEEEeHHHHHHH
Confidence 99999999999999999888536899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCccccccc
Q 014515 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKD 320 (423)
Q Consensus 241 ~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~ 320 (423)
+++|.+++.++++|+|.++++++||+++..+++++++++++++++|+++++||...+..|+|+.|||+.++++++++++|
T Consensus 302 ~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~e 381 (476)
T cd07142 302 VEKAKARALKRVVGDPFRKGVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGSKGYYIQPTIFSDVKDDMKIARD 381 (476)
T ss_pred HHHHHHHHHhcCCCCCCCCCCcCCcCcCHHHHHHHHHHHHHHHhCCCEEEecCCcCCCCCeeEccEEeecCCCCChhhhC
Confidence 99999999999999999999999999999999999999999999999999999865557899999999999999999999
Q ss_pred ccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCCCcch
Q 014515 321 EIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKG 400 (423)
Q Consensus 321 E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g 400 (423)
|+||||++|++|+|++|||+++|+++|||++||||+|.+++.++++++++|.|+||+++...+.+||||+|.||+|+++|
T Consensus 382 E~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g 461 (476)
T cd07142 382 EIFGPVQSILKFKTVDEVIKRANNSKYGLAAGVFSKNIDTANTLSRALKAGTVWVNCYDVFDASIPFGGYKMSGIGREKG 461 (476)
T ss_pred CccCceEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCcCCccch
Confidence 99999999999999999999999999999999999999999999999999999999987778889999999999999999
Q ss_pred HHHHHhhheeeEEE
Q 014515 401 SYSLSNYLQVKAVV 414 (423)
Q Consensus 401 ~~~l~~~~~~k~v~ 414 (423)
.+++++||+.|+++
T Consensus 462 ~~~~~~ft~~k~v~ 475 (476)
T cd07142 462 IYALNNYLQVKAVV 475 (476)
T ss_pred HHHHHHhhheeEEe
Confidence 99999999999885
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. |
| >PRK10090 aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-90 Score=688.41 Aligned_cols=406 Identities=35% Similarity=0.608 Sum_probs=383.6
Q ss_pred HHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCC-CCCceeEeeccceeEEEEc
Q 014515 10 ILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQII 88 (423)
Q Consensus 10 L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 88 (423)
|+++++.|++++++|++++++|+|||+.++.. |+..+++.+++++.+++...+...+.. .+...+.+++|+|||++|+
T Consensus 1 L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~-Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~ 79 (409)
T PRK10090 1 LRKIAAGIRERASEISALIVEEGGKIQQLAEV-EVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGIL 79 (409)
T ss_pred CHHHHHHHHHCHHHHHHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccCCCCCCceeEEEEecccEEEEEC
Confidence 57899999999999999999999999999885 999999999999999877665433221 2345788999999999999
Q ss_pred cCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCcceEeeecC
Q 014515 89 PWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGS 168 (423)
Q Consensus 89 p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 168 (423)
|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++.+.+..|..|+++|+|+||||
T Consensus 80 p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~~~v~~V~ftGs 159 (409)
T PRK10090 80 PWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSMTGS 159 (409)
T ss_pred CCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHcCCCcccEEEEeCCChhHHHHHhcCCCcCEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999977788999999999999999999
Q ss_pred chHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHHHHHHHHHHH
Q 014515 169 TTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALA 248 (423)
Q Consensus 169 ~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~ 248 (423)
+.+|+.|++.++. +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++++|+++|++++
T Consensus 160 ~~~g~~v~~~aa~-~~~~~~lElgGk~p~iV~~dADld~aa~~iv~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~ 238 (409)
T PRK10090 160 VSAGEKIMAAAAK-NITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAM 238 (409)
T ss_pred HHHHHHHHHHHHh-cCCeEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEcHHHHHHHHHHHHHHH
Confidence 9999999998887 889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCC-CCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCcccccccccccCee
Q 014515 249 MKRVVGDPFKG-GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQ 327 (423)
Q Consensus 249 ~~~~~g~p~~~-~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl 327 (423)
+++++|+|.++ ++++||++++.+++++++++++++++|+++++||...+..|+|++|||+.++++++++++||+||||+
T Consensus 239 ~~~~~G~p~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl 318 (409)
T PRK10090 239 QAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVL 318 (409)
T ss_pred HhcCCCCCCCcccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEecEEEeCCCCCCHHHhCCCCCceE
Confidence 99999999998 99999999999999999999999999999999997655568999999999999999999999999999
Q ss_pred EEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCCCcchHHHHHhh
Q 014515 328 SILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNY 407 (423)
Q Consensus 328 ~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~ 407 (423)
+|++|+|+||||+++|+++|||++||||+|.+++.++++++++|.|+||+.....+..||||+|+||+|+++|.+|+++|
T Consensus 319 ~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~gl~~f 398 (409)
T PRK10090 319 PVVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEY 398 (409)
T ss_pred EEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccccCCccchHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999776666789999999999999999999999
Q ss_pred heeeEEEEec
Q 014515 408 LQVKAVVTAL 417 (423)
Q Consensus 408 ~~~k~v~~~~ 417 (423)
++.|++++++
T Consensus 399 ~~~k~v~~~~ 408 (409)
T PRK10090 399 LQTQVVYLQS 408 (409)
T ss_pred cceEEEEEec
Confidence 9999997764
|
|
| >PRK13968 putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-90 Score=699.15 Aligned_cols=413 Identities=29% Similarity=0.474 Sum_probs=386.9
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
++.++|+++|+++++.|+++.++|++++++|+|||..++.. |+..+++.+++++...+...........+...++.++|
T Consensus 48 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 126 (462)
T PRK13968 48 TNIDYRAQKLRDIGKALRARSEEMAQMITREMGKPINQARA-EVAKSANLCDWYAEHGPAMLKAEPTLVENQQAVIEYRP 126 (462)
T ss_pred CCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhhCCccccCCCceEEEEEec
Confidence 57899999999999999999999999999999999999875 99999999999998776554332221224556888999
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 160 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v 160 (423)
+|||++|+|||||++..++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++.+ ...|+.||++
T Consensus 127 ~GvV~~I~PwN~P~~~~~~~~~~ALaaGN~vv~KPs~~tp~~~~~l~~~~~~aGlP~gv~~~v~g~~~~-~~~l~~~~~v 205 (462)
T PRK13968 127 LGTILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHAPNVMGCAQLIAQVFKDAGIPQGVYGWLNADNDG-VSQMINDSRI 205 (462)
T ss_pred cceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHcCcCcCcEEEEecCchh-hHHHhcCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999985544 4458899999
Q ss_pred ceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHHH
Q 014515 161 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240 (423)
Q Consensus 161 ~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~f 240 (423)
|.|+||||+++|+.|++.++. .++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|
T Consensus 206 ~~V~fTGs~~~G~~i~~~aa~-~l~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f 284 (462)
T PRK13968 206 AAVTVTGSVRAGAAIGAQAGA-ALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAF 284 (462)
T ss_pred CEEEEECCHHHHHHHHHHHhh-cCCcEEEecCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEECHhHHHHH
Confidence 999999999999999999887 7899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCccccccc
Q 014515 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKD 320 (423)
Q Consensus 241 ~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~ 320 (423)
+++|+++++++++|+|.++++++||+++..+++++.+++++++.+|+++++||......|+|++|||+.++++++.+++|
T Consensus 285 ~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~e 364 (462)
T PRK13968 285 TERFVAAAAALKMGDPRDEENALGPMARFDLRDELHHQVEATLAEGARLLLGGEKIAGAGNYYAPTVLANVTPEMTAFRE 364 (462)
T ss_pred HHHHHHHHhcCCcCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCceEECCEEEeCCCCCChHHhC
Confidence 99999999999999999999999999999999999999999999999999999764445899999999999999999999
Q ss_pred ccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCCCcch
Q 014515 321 EIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKG 400 (423)
Q Consensus 321 E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g 400 (423)
|+||||++|++|+|.|||++++|+++|||++||||+|.+.+.++++++++|+|+||+.+...+.+||||+|.||+|+++|
T Consensus 365 E~FGPVl~v~~~~d~~eai~~~n~~~~gLs~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G 444 (462)
T PRK13968 365 ELFGPVAAITVAKDAEHALELANDSEFGLSATIFTTDETQARQMAARLECGGVFINGYCASDARVAFGGVKKSGFGRELS 444 (462)
T ss_pred CCcCCEEEEEEECCHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCcCch
Confidence 99999999999999999999999999999999999999999999999999999999987777889999999999999999
Q ss_pred HHHHHhhheeeEEEEe
Q 014515 401 SYSLSNYLQVKAVVTA 416 (423)
Q Consensus 401 ~~~l~~~~~~k~v~~~ 416 (423)
.+|+++||+.|+|++.
T Consensus 445 ~~~l~~ft~~k~v~~~ 460 (462)
T PRK13968 445 HFGLHEFCNIQTVWKD 460 (462)
T ss_pred HHHHHHhcceeEEEEe
Confidence 9999999999999764
|
|
| >PLN02278 succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-90 Score=703.89 Aligned_cols=414 Identities=42% Similarity=0.686 Sum_probs=390.5
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCC-CCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++.. |+..+++.+++++...+...+...+.. .+...+.+++
T Consensus 81 ~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-Ev~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 159 (498)
T PLN02278 81 LTASERSKILRRWYDLIIANKEDLAQLMTLEQGKPLKEAIG-EVAYGASFLEYFAEEAKRVYGDIIPSPFPDRRLLVLKQ 159 (498)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEee
Confidence 57899999999999999999999999999999999999875 999999999999988877655443322 2345677899
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccC
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 159 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~ 159 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++.+.++.|+.||+
T Consensus 160 P~GvV~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~l~eaglP~gvv~~v~g~~~~~~~~L~~~~~ 239 (498)
T PLN02278 160 PVGVVGAITPWNFPLAMITRKVGPALAAGCTVVVKPSELTPLTALAAAELALQAGIPPGVLNVVMGDAPEIGDALLASPK 239 (498)
T ss_pred cccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCChhhHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999877778899999999
Q ss_pred cceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHH
Q 014515 160 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239 (423)
Q Consensus 160 v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~ 239 (423)
+|.|+||||+.+|+.|++.+++ .++|+++|+|||||+||++|||++.|++.+++++|.++||.|+++++||||++++++
T Consensus 240 v~~V~fTGS~~~G~~i~~~aa~-~~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~ 318 (498)
T PLN02278 240 VRKITFTGSTAVGKKLMAGAAA-TVKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDK 318 (498)
T ss_pred cCEEEEECcHHHHHHHHHHHhh-cCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHhccCCCCCcCCcEEEEeHHHHHH
Confidence 9999999999999999999887 789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCcccccc
Q 014515 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAK 319 (423)
Q Consensus 240 f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~ 319 (423)
|+++|+++++++++|+|.++++++||++++.+++++.++|++++++|+++++||...+..|+|++|||+.++++++++++
T Consensus 319 f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~ 398 (498)
T PLN02278 319 FAEAFSKAVQKLVVGDGFEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSLGGTFYEPTVLGDVTEDMLIFR 398 (498)
T ss_pred HHHHHHHHHHhcCCCCCCCCCCcCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCceEeeEEEecCCCCChhhh
Confidence 99999999999999999999999999999999999999999999999999999976444689999999999999999999
Q ss_pred cccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCCCcc
Q 014515 320 DEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREK 399 (423)
Q Consensus 320 ~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~ 399 (423)
+|+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.||||+.....+.+||||+|.||+|+++
T Consensus 399 ~E~FGPVl~v~~~~~~deai~~~N~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~ 478 (498)
T PLN02278 399 EEVFGPVAPLTRFKTEEEAIAIANDTEAGLAAYIFTRDLQRAWRVSEALEYGIVGVNEGLISTEVAPFGGVKQSGLGREG 478 (498)
T ss_pred CCCcCCEEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcccCcCCccc
Confidence 99999999999999999999999999999999999999999999999999999999987655677899999999999999
Q ss_pred hHHHHHhhheeeEEEEe
Q 014515 400 GSYSLSNYLQVKAVVTA 416 (423)
Q Consensus 400 g~~~l~~~~~~k~v~~~ 416 (423)
|.+|+++||+.|++.++
T Consensus 479 G~~~l~~ft~~k~i~~~ 495 (498)
T PLN02278 479 SKYGIDEYLEIKYVCLG 495 (498)
T ss_pred hHHHHHHhheeEEEEEe
Confidence 99999999999998764
|
|
| >PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-90 Score=697.30 Aligned_cols=412 Identities=35% Similarity=0.560 Sum_probs=387.8
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCC---CCCCceeEe
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA---DGPYHVQTL 77 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~ 77 (423)
+|.++|.++|+++++.|++++++|++++++|+|||+.++.. |+..+++.+++++..+++........ ..+...+.+
T Consensus 42 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (457)
T PRK09406 42 TTFAQRARWANAAADLLEAEADQVAALMTLEMGKTLASAKA-EALKCAKGFRYYAEHAEALLADEPADAAAVGASRAYVR 120 (457)
T ss_pred CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEE
Confidence 57899999999999999999999999999999999999875 99999999999998877665433211 123456888
Q ss_pred eccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcc
Q 014515 78 HEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH 157 (423)
Q Consensus 78 ~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~ 157 (423)
++|+|||++|+|||||++..++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++ +.+.+..|+.|
T Consensus 121 ~~P~GvV~~I~PwN~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~l~~~aGlP~gvv~~v~~-g~~~~~~l~~~ 199 (457)
T PRK09406 121 YQPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHASNVPQTALYLADLFRRAGFPDGCFQTLLV-GSGAVEAILRD 199 (457)
T ss_pred EecceeEEEECCccchHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHhCCCcCcEEEEcC-CchhHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999986 34467889999
Q ss_pred cCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccH
Q 014515 158 MEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 237 (423)
Q Consensus 158 ~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~ 237 (423)
++++.|+||||+.+|+.|.+.+++ +++|+++|+|||||+||++|+|++.|++.+++++|.|+||.|+++++||||++++
T Consensus 200 ~~i~~V~fTGs~~~G~~i~~~a~~-~~~~~~lElGG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~ 278 (457)
T PRK09406 200 PRVAAATLTGSEPAGRAVAAIAGD-EIKKTVLELGGSDPFIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVY 278 (457)
T ss_pred CCcCEEEEECcHHHHHHHHHHHHh-cCCceeeecCCCCeeEECCCCCHHHHHHHHHHHHhhCCCCcccCCeEEEEcHHHH
Confidence 999999999999999999998887 7899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCcccc
Q 014515 238 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLI 317 (423)
Q Consensus 238 ~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~ 317 (423)
|+|+++|+++++++++|+|.|+++++||++++.+++++++++++++++|+++++||...+..|+|++|||+.+++++|.+
T Consensus 279 d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~~ 358 (457)
T PRK09406 279 DAFAEKFVARMAALRVGDPTDPDTDVGPLATEQGRDEVEKQVDDAVAAGATILCGGKRPDGPGWFYPPTVITDITPDMRL 358 (457)
T ss_pred HHHHHHHHHHHhhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCceEccEEeecCCCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999875556899999999999999999
Q ss_pred cccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCCC
Q 014515 318 AKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGR 397 (423)
Q Consensus 318 ~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~ 397 (423)
++||+||||++|++|+|++||++++|+++|||++||||+|.+++.++++++++|.|+||+.+...+.+||||+|.||+|+
T Consensus 359 ~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~ 438 (457)
T PRK09406 359 YTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAWTRDEAEQERFIDDLEAGQVFINGMTVSYPELPFGGVKRSGYGR 438 (457)
T ss_pred hhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCc
Confidence 99999999999999999999999999999999999999999999999999999999999988778889999999999999
Q ss_pred cchHHHHHhhheeeEEEE
Q 014515 398 EKGSYSLSNYLQVKAVVT 415 (423)
Q Consensus 398 ~~g~~~l~~~~~~k~v~~ 415 (423)
++|.+++++||+.|+|.+
T Consensus 439 ~~g~~~l~~~t~~k~v~~ 456 (457)
T PRK09406 439 ELSAHGIREFCNIKTVWI 456 (457)
T ss_pred cchHHHHHHhhceEEEEe
Confidence 999999999999999864
|
|
| >cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-89 Score=698.81 Aligned_cols=414 Identities=46% Similarity=0.798 Sum_probs=390.7
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
+|.++|.++|+++++.|++++++|++++++|+|||+.+++..|+..+++.+++++.++....+...+...+...+.+++|
T Consensus 57 ~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P 136 (475)
T cd07117 57 TTVAERANILNKIADIIDENKELLAMVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEGSANMIDEDTLSIVLREP 136 (475)
T ss_pred CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCceeEEEEee
Confidence 57899999999999999999999999999999999999876699999999999998776665543332233456889999
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 160 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v 160 (423)
+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++ +|+|++|+++|++.+.+..|+.|+++
T Consensus 137 ~GVV~~I~PwN~Pl~~~~~~i~~AL~aGN~VvlKPs~~~p~~~~~l~~~~~~~-lP~g~~~~v~g~~~~~~~~l~~~~~v 215 (475)
T cd07117 137 IGVVGQIIPWNFPFLMAAWKLAPALAAGNTVVIKPSSTTSLSLLELAKIIQDV-LPKGVVNIVTGKGSKSGEYLLNHPGL 215 (475)
T ss_pred cceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHh-CCcCcEEEEecCcHHHHHHHhcCCCC
Confidence 99999999999999999999999999999999999999999999999999985 99999999998777889999999999
Q ss_pred ceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHHH
Q 014515 161 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240 (423)
Q Consensus 161 ~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~f 240 (423)
|.|+||||+.+|+.|.+.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|
T Consensus 216 ~~v~fTGs~~~g~~i~~~aa~-~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f 294 (475)
T cd07117 216 DKLAFTGSTEVGRDVAIAAAK-KLIPATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEF 294 (475)
T ss_pred CEEEEECcHHHHHHHHHHHhc-cCCcEEEeCCCCCeEEECCCCChHHHHHHHHHHHhhccCCCCCCCeEEEEeHHHHHHH
Confidence 999999999999999998887 7899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC----CCCceeecEEEecCCCccc
Q 014515 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDML 316 (423)
Q Consensus 241 ~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~ 316 (423)
+++|++++.++++|+|.++++++||+++..+++++.+++++++++|+++++||.... ..|+|++|||+.+++++++
T Consensus 295 ~~~l~~~~~~l~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~ 374 (475)
T cd07117 295 VAKLKEKFENVKVGNPLDPDTQMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDKGFFIEPTLIVNVTNDMR 374 (475)
T ss_pred HHHHHHHHHhccCCCCCCCCCcccCcCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCeEEeeEEeecCCCCCh
Confidence 999999999999999999999999999999999999999999999999999997532 3589999999999999999
Q ss_pred ccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCC
Q 014515 317 IAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQG 396 (423)
Q Consensus 317 ~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g 396 (423)
+++||+||||++|++|+|.||||+++|+++|||++||||+|.+++.++++++++|.|+||+++...+.+||||+|+||+|
T Consensus 375 i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G 454 (475)
T cd07117 375 VAQEEIFGPVATVIKFKTEDEVIDMANDSEYGLGGGVFTKDINRALRVARAVETGRVWVNTYNQIPAGAPFGGYKKSGIG 454 (475)
T ss_pred hhhCCCcCCeEEEEEECCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999998777788999999999999
Q ss_pred CcchHHHHHhhheeeEEEEe
Q 014515 397 REKGSYSLSNYLQVKAVVTA 416 (423)
Q Consensus 397 ~~~g~~~l~~~~~~k~v~~~ 416 (423)
+++|.+|+++||+.|+++++
T Consensus 455 ~~~g~~~~~~ft~~k~v~~~ 474 (475)
T cd07117 455 RETHKSMLDAYTQMKNIYID 474 (475)
T ss_pred CCchHHHHHHHhCeEEEEEe
Confidence 99999999999999999765
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. |
| >cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-90 Score=701.64 Aligned_cols=416 Identities=62% Similarity=1.060 Sum_probs=392.7
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++...|+..+++.+++++.+.++..+...+...+...+.+++|
T Consensus 66 ~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P 145 (481)
T cd07141 66 MDASERGRLLNKLADLIERDRAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAGWADKIHGKTIPMDGDFFTYTRHEP 145 (481)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCCCCceEEEEEec
Confidence 47899999999999999999999999999999999977655699999999999999887776654433333456789999
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 160 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v 160 (423)
+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++.+.+..|+.||++
T Consensus 146 ~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v 225 (481)
T cd07141 146 VGVCGQIIPWNFPLLMAAWKLAPALACGNTVVLKPAEQTPLTALYLASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDI 225 (481)
T ss_pred eeEEEEEccChhHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999777788999999999
Q ss_pred ceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHHH
Q 014515 161 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240 (423)
Q Consensus 161 ~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~f 240 (423)
|.|+||||+.+|+.|++.++..+++|+++|+|||||+||++|||++.|++.+++++|.++||.|+++++||||++++|+|
T Consensus 226 d~V~ftGs~~~g~~i~~~aa~~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f 305 (481)
T cd07141 226 DKVAFTGSTEVGKLIQQAAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESIYDEF 305 (481)
T ss_pred CEEEEECcHHHHHHHHHHhhhhcCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCeEEEEcHHHHHHH
Confidence 99999999999999999887546899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCccccccc
Q 014515 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKD 320 (423)
Q Consensus 241 ~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~ 320 (423)
+++|+++++++++|+|.|+++++||++++.+++++.+++++++++|+++++||+..+..|+|++|||+.++++++++++|
T Consensus 306 ~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~e 385 (481)
T cd07141 306 VKRSVERAKKRVVGNPFDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRHGDKGYFIQPTVFSDVTDDMRIAKE 385 (481)
T ss_pred HHHHHHHHHhCCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhc
Confidence 99999999999999999999999999999999999999999999999999999875557899999999999999999999
Q ss_pred ccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCCCcch
Q 014515 321 EIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKG 400 (423)
Q Consensus 321 E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g 400 (423)
|+||||++|++|+|++|||+++|+++|||++||||+|.+++.++++++++|+|+||+.+...+.+||||+|.||+|+++|
T Consensus 386 E~FgPvl~v~~~~~~~eai~~~n~~~~gLs~~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g 465 (481)
T cd07141 386 EIFGPVQQIFKFKTIDEVIERANNTTYGLAAAVFTKDIDKAITFSNALRAGTVWVNCYNVVSPQAPFGGYKMSGNGRELG 465 (481)
T ss_pred cccCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCcccCcCCccch
Confidence 99999999999999999999999999999999999999999999999999999999987777889999999999999999
Q ss_pred HHHHHhhheeeEEEEe
Q 014515 401 SYSLSNYLQVKAVVTA 416 (423)
Q Consensus 401 ~~~l~~~~~~k~v~~~ 416 (423)
.+++++||+.|+++++
T Consensus 466 ~~~~~~ft~~k~v~~~ 481 (481)
T cd07141 466 EYGLQEYTEVKTVTIK 481 (481)
T ss_pred HHHHHHHhheEEEEEC
Confidence 9999999999998753
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. |
| >PRK13252 betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-89 Score=702.05 Aligned_cols=416 Identities=45% Similarity=0.779 Sum_probs=391.9
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
+|.++|.++|++++++|++++++|++++++|+|||..+++..|+..+++.+++++.+.+...+...+...+...+.+++|
T Consensus 63 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P 142 (488)
T PRK13252 63 MTAMERSRILRRAVDILRERNDELAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALEGEQIPLRGGSFVYTRREP 142 (488)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCCCceEEEEEee
Confidence 57899999999999999999999999999999999999876699999999999998887665544332234456889999
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 160 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v 160 (423)
+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++++. .++.|+.||++
T Consensus 143 lGVv~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~t~~~l~~~~~~aglP~g~v~~v~g~~~-~~~~L~~~~~v 221 (488)
T PRK13252 143 LGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGLPDGVFNVVQGDGR-VGAWLTEHPDI 221 (488)
T ss_pred eeEEEEECCCchHHHHHHHHHHHHHhcCCeEEEeCCccCcHHHHHHHHHHHHcCcCcccEEEEecCcH-HHHHHhcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999998665 88999999999
Q ss_pred ceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHHH
Q 014515 161 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240 (423)
Q Consensus 161 ~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~f 240 (423)
|.|+||||+.+|+.|.+.++. +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|
T Consensus 222 d~V~fTGS~~~g~~i~~~aa~-~l~~~~lElgG~~p~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f 300 (488)
T PRK13252 222 AKVSFTGGVPTGKKVMAAAAA-SLKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAF 300 (488)
T ss_pred CEEEEECcHHHHHHHHHHHhh-cCCcEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHH
Confidence 999999999999999998887 6899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC----CCCceeecEEEecCCCccc
Q 014515 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDML 316 (423)
Q Consensus 241 ~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~ 316 (423)
+++|+++++++++|+|.++++++||++++.+++++++++++++++|+++++||...+ ..|+|++|||+.+++++++
T Consensus 301 ~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~v~~~~~ 380 (488)
T PRK13252 301 EARLLERVERIRIGDPMDPATNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFANGAFVAPTVFTDCTDDMT 380 (488)
T ss_pred HHHHHHHHHhcCCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCeEEccEEeccCCCCCh
Confidence 999999999999999999999999999999999999999999999999999996432 3589999999999999999
Q ss_pred ccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCC
Q 014515 317 IAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQG 396 (423)
Q Consensus 317 ~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g 396 (423)
+++||+||||++|++|+|.+|||+++|+++|||++||||+|.++++++++++++|.|+||+.+...+.+||||+|.||+|
T Consensus 381 i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~I~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G 460 (488)
T PRK13252 381 IVREEIFGPVMSVLTFDDEDEVIARANDTEYGLAAGVFTADLSRAHRVIHQLEAGICWINTWGESPAEMPVGGYKQSGIG 460 (488)
T ss_pred HhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCccCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999987666778999999999999
Q ss_pred CcchHHHHHhhheeeEEEEecC
Q 014515 397 REKGSYSLSNYLQVKAVVTALK 418 (423)
Q Consensus 397 ~~~g~~~l~~~~~~k~v~~~~~ 418 (423)
+++|.+|+++||+.|+|++...
T Consensus 461 ~~~g~~~~~~ft~~k~i~~~~~ 482 (488)
T PRK13252 461 RENGIATLEHYTQIKSVQVEMG 482 (488)
T ss_pred cCChHHHHHHhcceEEEEEeCC
Confidence 9999999999999999988753
|
|
| >cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-89 Score=699.94 Aligned_cols=415 Identities=46% Similarity=0.810 Sum_probs=392.7
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||+.++...|+..+++.+++++.+.+...+...+...+...+..++|
T Consensus 57 ~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P 136 (480)
T cd07559 57 TSVAERANILNKIADRIEENLELLAVAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEGSLSEIDEDTLSYHFHEP 136 (480)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEEec
Confidence 57899999999999999999999999999999999999876699999999999998887665544333334567889999
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 160 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v 160 (423)
+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++ +|+|++|++++++.+.++.|+.||++
T Consensus 137 ~GVV~~I~PwN~P~~~~~~~i~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~-lP~gvv~~v~g~~~~~~~~L~~~~~v 215 (480)
T cd07559 137 LGVVGQIIPWNFPLLMAAWKLAPALAAGNTVVLKPASQTPLSILVLMELIGDL-LPKGVVNVVTGFGSEAGKPLASHPRI 215 (480)
T ss_pred cceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECchhhhHHHHHHHHHHHHh-CCcCeEEEEecCchHHHHHHhcCCCC
Confidence 99999999999999999999999999999999999999999999999999996 99999999999777889999999999
Q ss_pred ceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCC-----CHHHHHHHHHHHHHhccCCcccCCCeEEEeCc
Q 014515 161 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDA-----DVDKAAELAHYALFFNQGQCCCAGSRTFVHES 235 (423)
Q Consensus 161 ~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~a-----d~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~ 235 (423)
+.|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|| |++.|++.+++++|.|+||.|+++++||||++
T Consensus 216 ~~V~fTGs~~~g~~i~~~aa~-~~~p~~lElGGk~p~iV~~dA~~~~~Dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~ 294 (480)
T cd07559 216 AKLAFTGSTTVGRLIMQYAAE-NLIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQES 294 (480)
T ss_pred CEEEEECcHHHHHHHHHHHhc-cCCcEEeccCCCCeEEEcCCccccccCHHHHHHHHHHHHHhhCCCCCCCCeEEEEcHH
Confidence 999999999999999999887 789999999999999999999 99999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC----CCCceeecEEEecC
Q 014515 236 VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGV 311 (423)
Q Consensus 236 ~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~----~~g~~~~Ptvl~~~ 311 (423)
++|+|+++|+++++++++|+|.|+++++||++++.++++++++|++++++|+++++||...+ ..|+|++|||+.++
T Consensus 295 i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~ 374 (480)
T cd07559 295 IYDEFIERAVERFEAIKVGNPLDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPTLIKGG 374 (480)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCcEECeEEEeCC
Confidence 99999999999999999999999999999999999999999999999999999999997643 36899999999999
Q ss_pred CCcccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCC
Q 014515 312 KDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYK 391 (423)
Q Consensus 312 ~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~ 391 (423)
++++.++++|+||||++|++|+|++|||+++|+++|||++||||+|.+++.++++++++|.|+||+.+...+.+||||+|
T Consensus 375 ~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~a~~l~~G~v~iN~~~~~~~~~PfGG~k 454 (480)
T cd07559 375 NNDMRIFQEEIFGPVLAVITFKDEEEAIAIANDTEYGLGGGVWTRDINRALRVARGIQTGRVWVNCYHQYPAHAPFGGYK 454 (480)
T ss_pred CCCCcHHhcCCcCceEEEEeeCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999877777889999999
Q ss_pred CCCCCCcchHHHHHhhheeeEEEEec
Q 014515 392 QSGQGREKGSYSLSNYLQVKAVVTAL 417 (423)
Q Consensus 392 ~SG~g~~~g~~~l~~~~~~k~v~~~~ 417 (423)
+||+|+++|.+|+++||+.|++++++
T Consensus 455 ~SG~G~~~g~~~~~~~~~~k~v~~~~ 480 (480)
T cd07559 455 KSGIGRETHKMMLDHYQQTKNILVSY 480 (480)
T ss_pred cCcCCccChHHHHHHhhceEEEEEeC
Confidence 99999999999999999999998763
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. |
| >cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-89 Score=697.55 Aligned_cols=416 Identities=55% Similarity=0.965 Sum_probs=392.5
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
+|.++|.++|+++++.|++++++|++++++|+|||..+....|+..+++.+++++.++++..+...+...+...+..++|
T Consensus 65 ~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~a~~~~g~~~~~~~~~~~~~~~~P 144 (481)
T cd07143 65 VSGSKRGRCLSKLADLMERNLDYLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKIHGQVIETDIKKLTYTRHEP 144 (481)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceEEEEEec
Confidence 47899999999999999999999999999999999976655699999999999999987765544332234456789999
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 160 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v 160 (423)
+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++++++|++.+.++.|+.||++
T Consensus 145 ~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~L~~~~~v 224 (481)
T cd07143 145 IGVCGQIIPWNFPLLMCAWKIAPALAAGNTIVLKPSELTPLSALYMTKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDI 224 (481)
T ss_pred ceeEEEECCCcChHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHhcCcCcccEEEEeCCchhHHHHHhcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999777889999999999
Q ss_pred ceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHHH
Q 014515 161 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240 (423)
Q Consensus 161 ~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~f 240 (423)
|.|+||||+.+|+.|++.++..+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|
T Consensus 225 d~V~fTGs~~~G~~i~~~aa~~~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~naGQ~C~a~~rv~V~~~i~d~f 304 (481)
T cd07143 225 DKVAFTGSTLVGRKVMEAAAKSNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKF 304 (481)
T ss_pred CEEEEECchHHHHHHHHHHHHhcCCEEEeecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEeHhHHHHH
Confidence 99999999999999999887546899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCccccccc
Q 014515 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKD 320 (423)
Q Consensus 241 ~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~ 320 (423)
+++|+++++++++|+|.++++++||++++.+++++.++|++++.+|+++++||......|+|+.|||+.++++++.+++|
T Consensus 305 ~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~e 384 (481)
T cd07143 305 VKRFKEKAKKLKVGDPFAEDTFQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGNEGYFIEPTIFTDVTEDMKIVKE 384 (481)
T ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCceEEeeEEEecCCCCChhhhc
Confidence 99999999999999999999999999999999999999999999999999999865456899999999999999999999
Q ss_pred ccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCCCcch
Q 014515 321 EIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKG 400 (423)
Q Consensus 321 E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g 400 (423)
|+||||++|++|+|.+||++++|+++|||++||||+|.+++.++++++++|+|+||+.+...+.+||||+|.||+|+++|
T Consensus 385 E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G 464 (481)
T cd07143 385 EIFGPVVAVIKFKTEEEAIKRANDSTYGLAAAVFTNNINNAIRVANALKAGTVWVNCYNLLHHQVPFGGYKQSGIGRELG 464 (481)
T ss_pred CCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCccccccCcccH
Confidence 99999999999999999999999999999999999999999999999999999999987777889999999999999999
Q ss_pred HHHHHhhheeeEEEEe
Q 014515 401 SYSLSNYLQVKAVVTA 416 (423)
Q Consensus 401 ~~~l~~~~~~k~v~~~ 416 (423)
.+++++||+.|+++++
T Consensus 465 ~~~l~~~t~~k~i~~~ 480 (481)
T cd07143 465 EYALENYTQIKAVHIN 480 (481)
T ss_pred HHHHHHHhCeEEEEEe
Confidence 9999999999999765
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. |
| >TIGR01780 SSADH succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-89 Score=695.09 Aligned_cols=409 Identities=41% Similarity=0.694 Sum_probs=386.3
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCC-CCCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..+++. |+..+++.+++++...++..+...+. ..+...+..++
T Consensus 38 ~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (448)
T TIGR01780 38 TTAKERSSLLRKWYNLMMENKDDLARLITLENGKPLKEAKG-EILYAASFLEWFAEEAKRVYGDTIPSPQSDKRLLVIKQ 116 (448)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEe
Confidence 57899999999999999999999999999999999999875 99999999999998776665544332 23445577899
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCC-chhHHHHhhccc
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY-GPTAGAALASHM 158 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~-~~~~~~~l~~~~ 158 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++++ +.+.++.|+.||
T Consensus 117 P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~~l~~~~ 196 (448)
T TIGR01780 117 PVGVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSALALARLAEQAGIPKGVLNVITGSRAKEVGKVLCTSP 196 (448)
T ss_pred eeeEEEEEcCCChHHHHHHHHHHHHHHcCCeEeeECCccchHHHHHHHHHHHHcCCCccceEEEeCCCchHHHHHHhcCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999986 677889999999
Q ss_pred CcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHH
Q 014515 159 EVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 238 (423)
Q Consensus 159 ~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~ 238 (423)
+++.|+||||+.+|+.|++.++. +++|+++|+|||||+||++|+|++.|++.+++++|.|+||.|+++++||||++++|
T Consensus 197 ~i~~v~ftGs~~~g~~v~~~aa~-~~~~~~lElGGk~~~iV~~dadl~~aa~~iv~~~f~~sGQ~C~a~~rv~V~~~i~d 275 (448)
T TIGR01780 197 LVRKISFTGSTNVGKILMKQSAS-TVKKVSMELGGNAPFIVFDDADIDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYD 275 (448)
T ss_pred CCCEEEEECcHHHHHHHHHHHhh-cCCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCcccCCceeechHHHHH
Confidence 99999999999999999999887 78999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCccccc
Q 014515 239 QFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIA 318 (423)
Q Consensus 239 ~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~ 318 (423)
+|+++|+++++++++|+|.++++++||++++.++++++++|++++++|+++++||...+..|+|++|||+.+++++|+++
T Consensus 276 ~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~il~gg~~~~~~g~~~~Ptvl~~~~~~~~i~ 355 (448)
T TIGR01780 276 EFAKKLAEAVKKLKVGNGLDEGVTQGPLINEKAVEKVEKHIADAVEKGAKVVTGGKRHELGGNFFEPTVLSNVTQDMLVA 355 (448)
T ss_pred HHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeeEcCEEEecCCCCChHh
Confidence 99999999999999999999999999999999999999999999999999999997654468999999999999999999
Q ss_pred ccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCCCc
Q 014515 319 KDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGRE 398 (423)
Q Consensus 319 ~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~ 398 (423)
+||+||||++|++|+|++||++++|+++|||++||||+|.++++++++++++|.||||+....++.+||||+|.||+|++
T Consensus 356 ~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~~~vfs~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~ 435 (448)
T TIGR01780 356 KEETFGPLAPVFKFDDEEEVIAIANDTEVGLAAYFFSRDLATIWRVAEALEYGMVGINTGLISNVVAPFGGVKQSGLGRE 435 (448)
T ss_pred hCCCCCceEEEEEECCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCcccccCCcc
Confidence 99999999999999999999999999999999999999999999999999999999998776677899999999999999
Q ss_pred chHHHHHhhheee
Q 014515 399 KGSYSLSNYLQVK 411 (423)
Q Consensus 399 ~g~~~l~~~~~~k 411 (423)
+|.+++++|++.|
T Consensus 436 ~g~~~~~~~~~~k 448 (448)
T TIGR01780 436 GSKYGIEEYLETK 448 (448)
T ss_pred chHHHHHHHhccC
Confidence 9999999999875
|
SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070). |
| >TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-89 Score=698.15 Aligned_cols=415 Identities=39% Similarity=0.661 Sum_probs=388.8
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCC----CCCCceeE
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA----DGPYHVQT 76 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~ 76 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++...|+..+++.+++++...+...+...+. ..+...+.
T Consensus 56 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (481)
T TIGR03216 56 MTVAERADLLYAVADEIERRFDDFLAAEVADTGKPRSLASHLDIPRGAANFRVFADVVKNAPTECFEMATPDGKGALNYA 135 (481)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEE
Confidence 57899999999999999999999999999999999998865699999999999998876654443221 11234678
Q ss_pred eeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCch-hHHHHhh
Q 014515 77 LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGP-TAGAALA 155 (423)
Q Consensus 77 ~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~-~~~~~l~ 155 (423)
+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.++.+++.++|+|+|++++++|++. +.++.|.
T Consensus 136 ~~~P~Gvv~~I~p~N~Pl~~~~~~~~~ALaaGN~vvlKPs~~tp~t~~~l~~l~~~aglP~g~~~~v~g~~~~~~~~~l~ 215 (481)
T TIGR03216 136 VRKPLGVVGVISPWNLPLLLMTWKVGPALACGNTVVVKPSEETPGTATLLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLT 215 (481)
T ss_pred EEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHcCCCcCceEEEecCChhHHHHHHh
Confidence 899999999999999999999999999999999999999999999999999999999999999999998654 5788899
Q ss_pred cccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCc
Q 014515 156 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES 235 (423)
Q Consensus 156 ~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~ 235 (423)
.||++|.|+||||+.+|+.|++.+++ +++|+++|+||+||+||++|||++.|++.+++++|.|+||.|+++++||||++
T Consensus 216 ~~~~vd~v~fTGS~~~G~~i~~~aa~-~~~~~~lElgG~n~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~ 294 (481)
T TIGR03216 216 RHPGVDAITFTGETRTGSAIMKAAAD-GVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERP 294 (481)
T ss_pred cCCCCCEEEEECCHHHHHHHHHHHhc-CCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHH
Confidence 99999999999999999999999887 78999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC-----CCCceeecEEEec
Q 014515 236 VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-----AKGYYIKPTVFTG 310 (423)
Q Consensus 236 ~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~-----~~g~~~~Ptvl~~ 310 (423)
++|+|+++|.++++++++|+|.|+++++||+++..+++++++++++++++|+++++||...+ ..|+|++|||+.+
T Consensus 295 i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~PTvl~~ 374 (481)
T TIGR03216 295 IFDRFVAALKARAESLKIGVPDDPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDALAGGAWVQPTIWTG 374 (481)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcccccccCCCCceEccEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999997532 3589999999999
Q ss_pred CCCcccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCC
Q 014515 311 VKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGY 390 (423)
Q Consensus 311 ~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~ 390 (423)
+++++++++||+||||++|++|+|.||||+++|+++|||++||||+|.++++++++++++|.|+||+.....+.+||||+
T Consensus 375 v~~~~~i~~eE~FgPvl~V~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~ 454 (481)
T TIGR03216 375 LPDSARVVTEEIFGPCCHIAPFDSEEEVIALANDTPYGLAASVWTEDLSRAHRVARQMEVGIVWVNSWFLRDLRTPFGGS 454 (481)
T ss_pred CCCCCHHHhCCCCCceEEEEEeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCccEEEECCCCCCCCCCCcCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999987766778999999
Q ss_pred CCCCCCCcchHHHHHhhheeeEEEEe
Q 014515 391 KQSGQGREKGSYSLSNYLQVKAVVTA 416 (423)
Q Consensus 391 ~~SG~g~~~g~~~l~~~~~~k~v~~~ 416 (423)
|.||+|+++|.+|+++||+.|+++++
T Consensus 455 k~SG~G~~~g~~~l~~f~~~k~v~~~ 480 (481)
T TIGR03216 455 KLSGIGREGGVHSLEFYTELTNVCIK 480 (481)
T ss_pred ccCcCCcCchHHHHHHhhceEEEEEe
Confidence 99999999999999999999999764
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation. |
| >cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-89 Score=691.80 Aligned_cols=412 Identities=35% Similarity=0.579 Sum_probs=389.4
Q ss_pred CHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeeccc
Q 014515 2 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPI 81 (423)
Q Consensus 2 ~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 81 (423)
+.++|+++|+++++.|++++++|++++++|+|||..++.. |+..+++.++++++.+++..+...+...+...+..++|+
T Consensus 40 ~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-Ev~~~i~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~ 118 (455)
T cd07120 40 DPRLRARVLLELADAFEANAERLARLLALENGKILGEARF-EISGAISELRYYAGLARTEAGRMIEPEPGSFSLVLREPM 118 (455)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEecc
Confidence 5689999999999999999999999999999999999875 999999999999988877665443322345678999999
Q ss_pred eeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHH-cCCCCCcEEEEeCCchhHHHHhhcccCc
Q 014515 82 GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHE-AGLPPGVLNIVSGYGPTAGAALASHMEV 160 (423)
Q Consensus 82 Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~-ag~P~g~v~~v~~~~~~~~~~l~~~~~v 160 (423)
|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.+ +|+|+|+++++++++.+.++.|+.||++
T Consensus 119 Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~~~~~~~~~l~~~~~~aag~P~g~~~~v~g~~~~~~~~l~~~~~v 198 (455)
T cd07120 119 GVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQINAAIIRILAEIPSLPAGVVNLFTESGSEGAAHLVASPDV 198 (455)
T ss_pred eeEEEECCCchHHHHHHHHHHHHHHcCCEEEeECCCCChHHHHHHHHHHHHhcCCCccceEEEecCchhHHHHHhcCCCC
Confidence 999999999999999999999999999999999999999999999999999 7999999999998777889999999999
Q ss_pred ceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHHH
Q 014515 161 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240 (423)
Q Consensus 161 ~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~f 240 (423)
+.|.||||+.+|+.|++.+++ +++|+++|+||+||+||++|+|++.|++.+++++|.++||.|+++++||||++++++|
T Consensus 199 ~~v~fTGs~~~g~~i~~~aa~-~~~~~~lElGG~~~~IV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f 277 (455)
T cd07120 199 DVISFTGSTATGRAIMAAAAP-TLKRLGLELGGKTPCIVFDDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEV 277 (455)
T ss_pred CEEEEECCHHHHHHHHHHHHh-cCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEEcHHHHHHH
Confidence 999999999999999999887 7899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCC---CCceeecEEEecCCCcccc
Q 014515 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA---KGYYIKPTVFTGVKDDMLI 317 (423)
Q Consensus 241 ~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~---~g~~~~Ptvl~~~~~~~~~ 317 (423)
+++|+++++++++|+|.|+++++||++++.+++++++++++++++|+++++||...+. .|+|++|||+.+++++|.+
T Consensus 278 ~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~~~~~g~~~~~~~~~g~~~~Ptvl~~~~~d~~i 357 (455)
T cd07120 278 RDRLAARLAAVKVGPGLDPASDMGPLIDRANVDRVDRMVERAIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDDPDADI 357 (455)
T ss_pred HHHHHHHHHhcCcCCCCCCCCCcCCccCHHHHHHHHHHHHHHHHCCCEEEeCCccCcccCCCCceECCEEEecCCCCChh
Confidence 9999999999999999999999999999999999999999999999999998864332 5899999999999999999
Q ss_pred cccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCCC
Q 014515 318 AKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGR 397 (423)
Q Consensus 318 ~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~ 397 (423)
+++|+||||++|++|+|.||||+++|+++|||++||||+|.++++++++++++|.|+||++....+.+||||+|+||+|+
T Consensus 358 ~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLs~~ift~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~ 437 (455)
T cd07120 358 VQEEIFGPVLTLETFDDEAEAVALANDTDYGLAASVWTRDLARAMRVARAIRAGTVWINDWNKLFAEAEEGGYRQSGLGR 437 (455)
T ss_pred hhCcCcCceEEEeecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCccccccCc
Confidence 99999999999999999999999999999999999999999999999999999999999987777889999999999999
Q ss_pred cchHHHHHhhheeeEEEE
Q 014515 398 EKGSYSLSNYLQVKAVVT 415 (423)
Q Consensus 398 ~~g~~~l~~~~~~k~v~~ 415 (423)
++|++++++||+.|++++
T Consensus 438 ~~g~~~l~~ft~~k~v~~ 455 (455)
T cd07120 438 LHGVAALEDFIEYKHIYL 455 (455)
T ss_pred cchHHHHHHHhceeEEeC
Confidence 999999999999999853
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. |
| >PLN02467 betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-89 Score=695.54 Aligned_cols=415 Identities=43% Similarity=0.741 Sum_probs=391.5
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccC---CCC-CCCceeE
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA---PAD-GPYHVQT 76 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~---~~~-~~~~~~~ 76 (423)
+|.++|.++|+++++.|++++++|++++++|+|||+.++.. |+..+++.+++++.+++++.+... ... .+...+.
T Consensus 69 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (503)
T PLN02467 69 TTGAVRAKYLRAIAAKITERKSELAKLETLDCGKPLDEAAW-DMDDVAGCFEYYADLAEALDAKQKAPVSLPMETFKGYV 147 (503)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEE
Confidence 47899999999999999999999999999999999999885 999999999999988877755431 111 1335688
Q ss_pred eeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhc
Q 014515 77 LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALAS 156 (423)
Q Consensus 77 ~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~ 156 (423)
+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|++.+.++.|+.
T Consensus 148 ~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~Vv~Kps~~tp~~~~~l~~~~~eag~P~gvv~~v~g~~~~~~~~L~~ 227 (503)
T PLN02467 148 LKEPLGVVGLITPWNYPLLMATWKVAPALAAGCTAVLKPSELASVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLAS 227 (503)
T ss_pred EEecCceEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHcCcCcCeEEEEeCCchhHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999977788999999
Q ss_pred ccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCcc
Q 014515 157 HMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 236 (423)
Q Consensus 157 ~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~ 236 (423)
||+++.|+||||+.+|+.|++.++. +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++
T Consensus 228 ~~~v~~v~fTGs~~~g~~v~~~aa~-~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~rv~V~~~i 306 (503)
T PLN02467 228 HPGVDKIAFTGSTATGRKIMTAAAQ-MVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERI 306 (503)
T ss_pred CCCCCEEEEECCHHHHHHHHHHHhc-cCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhhcCCCCCCCcEEEEcHHH
Confidence 9999999999999999999999887 789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC--CCCceeecEEEecCCCc
Q 014515 237 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDD 314 (423)
Q Consensus 237 ~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~--~~g~~~~Ptvl~~~~~~ 314 (423)
+|+|+++|+++++++++|+|.|+++++||+++..+++++.+++++++.+|+++++||...+ ..|+|++|||+.+++++
T Consensus 307 ~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~ 386 (503)
T PLN02467 307 ASEFLEKLVKWAKNIKISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKGFFIEPTIITDVTTS 386 (503)
T ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCeEEeeEEEeCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999997532 35899999999999999
Q ss_pred ccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCC
Q 014515 315 MLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSG 394 (423)
Q Consensus 315 ~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG 394 (423)
+.+++||+||||++|++|+|.||||+++|+++|||+++|||+|.++++++++++++|.|+||+.+...+.+||||+|.||
T Consensus 387 ~~i~~eE~FgPvl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG 466 (503)
T PLN02467 387 MQIWREEVFGPVLCVKTFSTEDEAIELANDSHYGLAGAVISNDLERCERVSEAFQAGIVWINCSQPCFCQAPWGGIKRSG 466 (503)
T ss_pred ChHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999877666789999999999
Q ss_pred CCCcchHHHHHhhheeeEEEEec
Q 014515 395 QGREKGSYSLSNYLQVKAVVTAL 417 (423)
Q Consensus 395 ~g~~~g~~~l~~~~~~k~v~~~~ 417 (423)
+|+++|.+|+++||+.|+++...
T Consensus 467 ~G~~~G~~~l~~ft~~k~i~~~~ 489 (503)
T PLN02467 467 FGRELGEWGLENYLSVKQVTKYI 489 (503)
T ss_pred CCCcchHHHHHHhhCeEEEEEec
Confidence 99999999999999999998864
|
|
| >cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-89 Score=696.49 Aligned_cols=415 Identities=44% Similarity=0.755 Sum_probs=393.4
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
+|.++|.++|+++++.|++++++|++++++|+|||..++.. |+..+++.+++++.+.++..+...+...+...+.+++|
T Consensus 56 ~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 134 (482)
T cd07119 56 LPAQERAALLFRIADKIREDAEELARLETLNTGKTLRESEI-DIDDVANCFRYYAGLATKETGEVYDVPPHVISRTVREP 134 (482)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccCCCCceEEEEEee
Confidence 57899999999999999999999999999999999999885 99999999999998887665544333345567899999
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 160 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v 160 (423)
+|||++|+|||||+...++++++||++||+||+|||+.+|.++.++.+++.++|+|+|+++++++++.+.++.|+.||++
T Consensus 135 ~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~l~~~~~v 214 (482)
T cd07119 135 VGVCGLITPWNYPLLQAAWKLAPALAAGNTVVIKPSEVTPLTTIALFELIEEAGLPAGVVNLVTGSGATVGAELAESPDV 214 (482)
T ss_pred eeeEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCccccHHHHHHHHHHHHcCCCcCcEEEEecCcHHHHHHHhcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999998777789999999999
Q ss_pred ceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHHH
Q 014515 161 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240 (423)
Q Consensus 161 ~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~f 240 (423)
|+|+||||+.+|+.|.+.++. +++|+++|+||+||+||++|||++.|++.+++++|.++||.|+++++||||++++|+|
T Consensus 215 ~~V~fTGs~~~g~~i~~~aa~-~~~~~~lElGGkn~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f 293 (482)
T cd07119 215 DLVSFTGGTATGRSIMRAAAG-NVKKVALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKF 293 (482)
T ss_pred CEEEEECcHHHHHHHHHHHHh-cCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHH
Confidence 999999999999999999887 7899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC----CCCceeecEEEecCCCccc
Q 014515 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDML 316 (423)
Q Consensus 241 ~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~ 316 (423)
+++|++++.++++|+|.++++++||+++..+++++++++++++++|+++++||.... ..|+|++|||+.++++++.
T Consensus 294 ~~~l~~~~~~~~~G~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~ 373 (482)
T cd07119 294 VAALAERAKKIKLGNGLDADTEMGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYFVEPTIFDDVDRTMR 373 (482)
T ss_pred HHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceECCEEEecCCCCCh
Confidence 999999999999999999999999999999999999999999999999999997532 2589999999999999999
Q ss_pred ccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCC
Q 014515 317 IAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQG 396 (423)
Q Consensus 317 ~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g 396 (423)
++++|+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.|+||+.+...+.+||||+|+||+|
T Consensus 374 i~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G 453 (482)
T cd07119 374 IVQEEIFGPVLTVERFDTEEEAIRLANDTPYGLAGAVWTKDIARANRVARRLRAGTVWINDYHPYFAEAPWGGYKQSGIG 453 (482)
T ss_pred HhhCCCCCceEEEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999997777788999999999999
Q ss_pred CcchHHHHHhhheeeEEEEec
Q 014515 397 REKGSYSLSNYLQVKAVVTAL 417 (423)
Q Consensus 397 ~~~g~~~l~~~~~~k~v~~~~ 417 (423)
+++|++|+++||+.|++++++
T Consensus 454 ~~~G~~~l~~~t~~k~v~~~~ 474 (482)
T cd07119 454 RELGPTGLEEYQETKHININL 474 (482)
T ss_pred ccchHHHHHHHhceEEEEEec
Confidence 999999999999999998886
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. |
| >cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-89 Score=687.32 Aligned_cols=410 Identities=37% Similarity=0.583 Sum_probs=387.5
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCcc-CCCCCCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT-APADGPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++.. |+..+++.+++++..+++..... .+.. +...+.+++
T Consensus 18 ~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 95 (429)
T cd07100 18 TSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEARA-EVEKCAWICRYYAENAEAFLADEPIETD-AGKAYVRYE 95 (429)
T ss_pred CCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCeeccCC-CceEEEEEE
Confidence 57899999999999999999999999999999999999975 99999999999998887764322 2222 345678999
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccC
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 159 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~ 159 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..|.+++.++|+|+|+++++++++ +.+..|+.|++
T Consensus 96 P~GvV~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~l~~aglP~gvv~~v~g~~-~~~~~l~~~~~ 174 (429)
T cd07100 96 PLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGVFQNLLIDS-DQVEAIIADPR 174 (429)
T ss_pred eeeEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcCcEEEEeCCc-hhHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999854 56788999999
Q ss_pred cceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHH
Q 014515 160 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239 (423)
Q Consensus 160 v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~ 239 (423)
++.|.||||+.+|+.|++.++. ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+
T Consensus 175 i~~v~fTGs~~~g~~i~~~aa~-~~~~~~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~i~~~ 253 (429)
T cd07100 175 VRGVTLTGSERAGRAVAAEAGK-NLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRLQNAGQSCIAAKRFIVHEDVYDE 253 (429)
T ss_pred CCEEEEECcHHHHHHHHHHHhh-cCcceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCeEEEEcHHHHHH
Confidence 9999999999999999999887 789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCcccccc
Q 014515 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAK 319 (423)
Q Consensus 240 f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~ 319 (423)
|+++|++++.++++|+|+|+++++||++++.+++++++++++++++|+++++||...+..|+|++|||+.++++++++++
T Consensus 254 f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptv~~~~~~~~~~~~ 333 (429)
T cd07100 254 FLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVAAGATLLLGGKRPDGPGAFYPPTVLTDVTPGMPAYD 333 (429)
T ss_pred HHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEcCEEeecCCCCCHHHh
Confidence 99999999999999999999999999999999999999999999999999999976544689999999999999999999
Q ss_pred cccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCCCcc
Q 014515 320 DEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREK 399 (423)
Q Consensus 320 ~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~ 399 (423)
||+||||++|++|+|.||||+++|+++|||++||||+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++
T Consensus 334 eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfGG~~~SG~G~~~ 413 (429)
T cd07100 334 EELFGPVAAVIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVARRLEAGMVFINGMVKSDPRLPFGGVKRSGYGREL 413 (429)
T ss_pred CCCCCCeEEEeeeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCccccccCCcc
Confidence 99999999999999999999999999999999999999999999999999999999998777788999999999999999
Q ss_pred hHHHHHhhheeeEEE
Q 014515 400 GSYSLSNYLQVKAVV 414 (423)
Q Consensus 400 g~~~l~~~~~~k~v~ 414 (423)
|.+++++||+.|+++
T Consensus 414 g~~~l~~~~~~k~v~ 428 (429)
T cd07100 414 GRFGIREFVNIKTVW 428 (429)
T ss_pred hHHHHHHhcceeEEe
Confidence 999999999999875
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. |
| >cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-89 Score=691.60 Aligned_cols=415 Identities=51% Similarity=0.910 Sum_probs=394.2
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
+|.++|.++|+++++.|++++++|++++++|+|||..++...|+..+++.+++++.+.++..+...+...+...+.+++|
T Consensus 38 ~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~i~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P 117 (453)
T cd07115 38 MDPAERGRILWRLAELILANADELARLESLDTGKPIRAARRLDVPRAADTFRYYAGWADKIEGEVIPVRGPFLNYTVREP 117 (453)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCCCCceEEEEecc
Confidence 57899999999999999999999999999999999999876699999999999999887766554443345567899999
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 160 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v 160 (423)
+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+++++++++++.+.++.|+.||++
T Consensus 118 ~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~~~~~~aGlP~~~~~~v~g~~~~~~~~l~~~~~i 197 (453)
T cd07115 118 VGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSALRIAELMAEAGFPAGVLNVVTGFGEVAGAALVEHPDV 197 (453)
T ss_pred eeEEEEEcCCCCHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHHHHHHHHHhcCcCchheEEEecCchhHHHHHhcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999777788999999999
Q ss_pred ceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHHH
Q 014515 161 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240 (423)
Q Consensus 161 ~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~f 240 (423)
|.|+||||+.+|+.|.+.++. +++|+++|+||+||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|
T Consensus 198 d~v~fTGs~~~g~~v~~~aa~-~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f 276 (453)
T cd07115 198 DKITFTGSTAVGRKIMQGAAG-NLKRVSLELGGKSANIVFADADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEF 276 (453)
T ss_pred CEEEEECcHHHHHHHHHHHhh-cCCeEEEecCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCeEEEEcHHHHHHH
Confidence 999999999999999998887 7899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCccccccc
Q 014515 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKD 320 (423)
Q Consensus 241 ~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~ 320 (423)
+++|++++.++++|+|.++++++||++++.+++++.++|++++++|+++++||......|+|++|||+.++++++++++|
T Consensus 277 ~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~e 356 (453)
T cd07115 277 LERFTSLARSLRPGDPLDPKTQMGPLVSQAQFDRVLDYVDVGREEGARLLTGGKRPGARGFFVEPTIFAAVPPEMRIAQE 356 (453)
T ss_pred HHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceECCEEEecCCCCChHhhC
Confidence 99999999999999999999999999999999999999999999999999999764446889999999999999999999
Q ss_pred ccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCCCcch
Q 014515 321 EIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKG 400 (423)
Q Consensus 321 E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g 400 (423)
|+||||++|++|+|.||||+++|+++|||++||||+|.+.++++++++++|+|+||+.+...+.+||||+|.||+|+++|
T Consensus 357 E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~ifs~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~G~~~g 436 (453)
T cd07115 357 EIFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGRAHRVAAALKAGTVWINTYNRFDPGSPFGGYKQSGFGREMG 436 (453)
T ss_pred CCcCceEEEEeeCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCcccccCCcCch
Confidence 99999999999999999999999999999999999999999999999999999999987788889999999999999999
Q ss_pred HHHHHhhheeeEEEEe
Q 014515 401 SYSLSNYLQVKAVVTA 416 (423)
Q Consensus 401 ~~~l~~~~~~k~v~~~ 416 (423)
.+|+++|++.|+++++
T Consensus 437 ~~~~~~f~~~k~~~~~ 452 (453)
T cd07115 437 REALDEYTEVKSVWVN 452 (453)
T ss_pred HHHHHHhhceEEEEEe
Confidence 9999999999999765
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. |
| >cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-89 Score=695.48 Aligned_cols=415 Identities=65% Similarity=1.078 Sum_probs=392.9
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++...|+..+++.+++++.+.++..+...+...+...+..++|
T Consensus 62 ~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P 141 (476)
T cd07091 62 MDPRERGRLLNKLADLIERDRDELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQGKTIPIDGNFLAYTRREP 141 (476)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceEEEEEec
Confidence 47899999999999999999999999999999999877665699999999999998887766554443345567889999
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 160 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v 160 (423)
+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++.+.+..|..|+++
T Consensus 142 ~GVv~~I~p~N~P~~~~~~~~~~AL~aGN~VvlKps~~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~L~~~~~v 221 (476)
T cd07091 142 IGVCGQIIPWNFPLLMLAWKLAPALAAGNTVVLKPAEQTPLSALYLAELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDV 221 (476)
T ss_pred eeEEEEECCCcCHHHHHHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCCCcEEEEeCCChhHHHHHhcCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999998777888999999999
Q ss_pred ceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHHH
Q 014515 161 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240 (423)
Q Consensus 161 ~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~f 240 (423)
|.|+||||+.+|+.|++.++..+++|+++|+|||||+||++|||++.|++.+++++|.++||.|+++++||||++++|+|
T Consensus 222 d~V~fTGs~~~g~~v~~~aa~~~~~~~~lElgG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f 301 (476)
T cd07091 222 DKIAFTGSTAVGRTIMEAAAKSNLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDEF 301 (476)
T ss_pred CEEEEECcHHHHHHHHHHHHhcCCceEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHHHHHHH
Confidence 99999999999999999887657899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCccccccc
Q 014515 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKD 320 (423)
Q Consensus 241 ~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~ 320 (423)
+++|+++++++++|+|.++++++||+++..+++++.+++++++.+|+++++||......|+|++|||+.++++++.+++|
T Consensus 302 ~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~vl~gg~~~~~~~~~~~Ptvl~~v~~~~~~~~e 381 (476)
T cd07091 302 VEKFKARAEKRVVGDPFDPDTFQGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGSKGYFIQPTVFTDVKDDMKIAKE 381 (476)
T ss_pred HHHHHHHHhhCCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceECcEEecCCCCCChhhhC
Confidence 99999999999999999999999999999999999999999999999999999865557899999999999999999999
Q ss_pred ccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCCCcch
Q 014515 321 EIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKG 400 (423)
Q Consensus 321 E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g 400 (423)
|+||||++|++|+|++||++++|++++||++||||+|.++++++++++++|+|+||+.+...+.+||||+|.||+|+++|
T Consensus 382 E~FgPvl~v~~~~~~~eai~~~n~~~~gLsa~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~k~SG~G~~~g 461 (476)
T cd07091 382 EIFGPVVTILKFKTEDEVIERANDTEYGLAAGVFTKDINKALRVSRALKAGTVWVNTYNVFDAAVPFGGFKQSGFGRELG 461 (476)
T ss_pred CCCCCeEEEeecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCccch
Confidence 99999999999999999999999999999999999999999999999999999999987778889999999999999999
Q ss_pred HHHHHhhheeeEEEE
Q 014515 401 SYSLSNYLQVKAVVT 415 (423)
Q Consensus 401 ~~~l~~~~~~k~v~~ 415 (423)
.+|+++||+.|++++
T Consensus 462 ~~~~~~f~~~k~~~~ 476 (476)
T cd07091 462 EEGLEEYTQVKAVTI 476 (476)
T ss_pred HHHHHHhhceeEEeC
Confidence 999999999998853
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co |
| >PLN02315 aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-89 Score=694.58 Aligned_cols=413 Identities=29% Similarity=0.501 Sum_probs=385.4
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCC-CCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||+.++. .|+..+++.++|++..++++.+...+.. .+...+..++
T Consensus 75 ~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~GK~~~~a~-~ev~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 153 (508)
T PLN02315 75 VPAPKRGEIVRQIGDALRAKLDYLGRLVSLEMGKILAEGI-GEVQEIIDMCDFAVGLSRQLNGSIIPSERPNHMMMEVWN 153 (508)
T ss_pred CCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEe
Confidence 5789999999999999999999999999999999999986 4999999999999988877665443322 2344567899
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHH----HHHHHHHcCCCCCcEEEEeCCchhHHHHhh
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY----VSKLLHEAGLPPGVLNIVSGYGPTAGAALA 155 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~----l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~ 155 (423)
|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++.. +.+++.++|+|+|++|++++ +.+.+..|.
T Consensus 154 P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~~~~l~~~~~~~aGlP~gvv~~v~g-~~~~~~~l~ 232 (508)
T PLN02315 154 PLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTSFCG-GAEIGEAIA 232 (508)
T ss_pred cceEEEEECCCcchHHHHHHHHhHHHHcCCEEEeeCCCcChHHHHHHHHHHHHHHHHcCCCcccEEEecC-ChHHHHHHh
Confidence 9999999999999999999999999999999999999999999887 67888999999999999998 777899999
Q ss_pred cccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCc
Q 014515 156 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES 235 (423)
Q Consensus 156 ~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~ 235 (423)
.||+++.|+||||+++|+.|++.++. +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++
T Consensus 233 ~~~~v~~v~fTGS~~~G~~v~~~aa~-~~~~~~lElgGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~ 311 (508)
T PLN02315 233 KDTRIPLVSFTGSSKVGLMVQQTVNA-RFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHES 311 (508)
T ss_pred cCCCCCEEEEECCHHHHHHHHHHHHh-cCCCEEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeHH
Confidence 99999999999999999999998886 78999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCcc
Q 014515 236 VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDM 315 (423)
Q Consensus 236 ~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~ 315 (423)
++|+|+++|+++++++++|+|.++++++||+++..+++++.+++++++++|+++++||...+..|+|++|||+ +++++|
T Consensus 312 i~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl-~v~~~~ 390 (508)
T PLN02315 312 IYDDVLEQLLTVYKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAIESEGNFVQPTIV-EISPDA 390 (508)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEecEEE-ecCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999865556899999999 589999
Q ss_pred cccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHH--hcceeEEEEcCcCC-CCCCCCCCCCCC
Q 014515 316 LIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMR--ALRVGSVWINCFDV-FDAAIPFGGYKQ 392 (423)
Q Consensus 316 ~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~--~l~~g~v~iN~~~~-~~~~~pfgG~~~ 392 (423)
.+++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++ ++++|.||||+.+. ..+.+||||+|.
T Consensus 391 ~i~~eE~FGPVl~V~~~~~~deai~~aN~~~~gL~a~Vft~d~~~a~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~ 470 (508)
T PLN02315 391 DVVKEELFGPVLYVMKFKTLEEAIEINNSVPQGLSSSIFTRNPETIFKWIGPLGSDCGIVNVNIPTNGAEIGGAFGGEKA 470 (508)
T ss_pred hHHhCCCcCCEEEEEEeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHhhhcccceeEEEEcCCCCCCCCCCCCCcccc
Confidence 999999999999999999999999999999999999999999999999985 79999999998544 346789999999
Q ss_pred CCCCCcchHHHHHhhheeeEEEEec
Q 014515 393 SGQGREKGSYSLSNYLQVKAVVTAL 417 (423)
Q Consensus 393 SG~g~~~g~~~l~~~~~~k~v~~~~ 417 (423)
||+|+++|.+++++||+.|+|++++
T Consensus 471 SG~G~~~G~~~l~~ft~~k~v~~~~ 495 (508)
T PLN02315 471 TGGGREAGSDSWKQYMRRSTCTINY 495 (508)
T ss_pred ccCCccchHHHHHHHhhEEEEEEec
Confidence 9999999999999999999998875
|
|
| >cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-88 Score=694.22 Aligned_cols=415 Identities=52% Similarity=0.882 Sum_probs=390.8
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
+|.++|.++|+++++.|++++++|++++++|+|||..+....|+..+++.+++++.+.++..+...+...+...+..++|
T Consensus 65 ~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P 144 (484)
T cd07144 65 VTGEERGELLDKLADLVEKNRDLLAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKIQGKTIPTSPNKLAYTLHEP 144 (484)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCCCCceEEEEEec
Confidence 57899999999999999999999999999999999877644599999999999999887775544433334456888999
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 160 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v 160 (423)
+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++++.+.++.|..||++
T Consensus 145 ~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v 224 (484)
T cd07144 145 YGVCGQIIPWNYPLAMAAWKLAPALAAGNTVVIKPAENTPLSLLYFANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDV 224 (484)
T ss_pred ceEEEEECcCCCHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCcCCCcEEEEecCCchHHHHHhcCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999777889999999999
Q ss_pred ceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHHH
Q 014515 161 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240 (423)
Q Consensus 161 ~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~f 240 (423)
|.|+||||+.+|+.|.+.++. +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|
T Consensus 225 d~V~fTGS~~~g~~i~~~a~~-~~~~~~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f 303 (484)
T cd07144 225 DKIAFTGSTATGRLVMKAAAQ-NLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKF 303 (484)
T ss_pred CEEEEECcHHHHHHHHHHHHh-cCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHH
Confidence 999999999999999998887 7899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhh-cccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC---CCCceeecEEEecCCCccc
Q 014515 241 VEKANALAMK-RVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG---AKGYYIKPTVFTGVKDDML 316 (423)
Q Consensus 241 ~~~l~~~~~~-~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~---~~g~~~~Ptvl~~~~~~~~ 316 (423)
+++|++++.+ +++|+|.++++++||+++..+++++.+++++++++|+++++||.... ..|+|++|||+.++++++.
T Consensus 304 ~~~l~~~~~~~~~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~ 383 (484)
T cd07144 304 VEKFVEHVKQNYKVGSPFDDDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPEGLGKGYFIPPTIFTDVPQDMR 383 (484)
T ss_pred HHHHHHHHHhhCCcCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCcccCCCCceECCEEEeCCCCCCc
Confidence 9999999985 89999999999999999999999999999999999999999997643 3689999999999999999
Q ss_pred ccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCC
Q 014515 317 IAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQG 396 (423)
Q Consensus 317 ~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g 396 (423)
+++||+||||++|++|+|++|||+++|+++|||++||||+|.+++.++++++++|.|+||+.+...+.+||||+|.||+|
T Consensus 384 ~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLsa~i~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G 463 (484)
T cd07144 384 IVKEEIFGPVVVISKFKTYEEAIKKANDTTYGLAAAVFTKDIRRAHRVARELEAGMVWINSSNDSDVGVPFGGFKMSGIG 463 (484)
T ss_pred hhhCCCCCceEEEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999998777778999999999999
Q ss_pred CcchHHHHHhhheeeEEEEe
Q 014515 397 REKGSYSLSNYLQVKAVVTA 416 (423)
Q Consensus 397 ~~~g~~~l~~~~~~k~v~~~ 416 (423)
+++|.+|+++||+.|+++++
T Consensus 464 ~~~g~~~l~~~t~~k~v~~~ 483 (484)
T cd07144 464 RELGEYGLETYTQTKAVHIN 483 (484)
T ss_pred CCchHHHHHHhhceEEEEEe
Confidence 99999999999999999765
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. |
| >cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-88 Score=689.45 Aligned_cols=413 Identities=40% Similarity=0.680 Sum_probs=389.6
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++. .|+..+++.+++++.+.+...+...+...+...+..++|
T Consensus 38 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P 116 (456)
T cd07107 38 TTPLERARMLRELATRLREHAEELALIDALDCGNPVSAML-GDVMVAAALLDYFAGLVTELKGETIPVGGRNLHYTLREP 116 (456)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhCCccccCCCCceEEEEEec
Confidence 5789999999999999999999999999999999999986 499999999999998776666654443334567889999
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 160 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v 160 (423)
+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++ +|+|++|++++++.+.++.|+.||++
T Consensus 117 ~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~~-lP~gvv~~v~g~~~~~~~~l~~~~~i 195 (456)
T cd07107 117 YGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSALRLAELAREV-LPPGVFNILPGDGATAGAALVRHPDV 195 (456)
T ss_pred ceEEEEECCcccHHHHHHHHHhHHHHcCCEEEEeCCCCChHHHHHHHHHHHHh-CCcCcEEEEeCCCchHHHHHhcCCCC
Confidence 99999999999999999999999999999999999999999999999999995 99999999998777788999999999
Q ss_pred ceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHH-HhccCCcccCCCeEEEeCccHHH
Q 014515 161 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYAL-FFNQGQCCCAGSRTFVHESVYDQ 239 (423)
Q Consensus 161 ~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~-~~~~Gq~C~a~~~v~V~~~~~~~ 239 (423)
+.|+||||+++|+.|++.++. +++|+++|+|||||+||++|||++.|++.+++++ |.++||.|+++++||||++++|+
T Consensus 196 ~~v~fTGs~~~g~~i~~~aa~-~~~~~~lElgG~~p~iV~~dadl~~Aa~~i~~~~~f~~~GQ~C~a~~rv~V~~~i~d~ 274 (456)
T cd07107 196 KRIALIGSVPTGRAIMRAAAE-GIKHVTLELGGKNALIVFPDADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDE 274 (456)
T ss_pred CEEEEECcHHHHHHHHHHHhc-CCCeEEEECCCCCeEEECCCCCHHHHHHHHHHhchhhcCCCCCcCCcEEEEcHHHHHH
Confidence 999999999999999999887 7899999999999999999999999999999995 89999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC----CCCceeecEEEecCCCcc
Q 014515 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDM 315 (423)
Q Consensus 240 f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~ 315 (423)
|+++|+++++++++|+|.++++++||+++..++++++++|++++.+|+++++||.... ..|+|++|||+.+++++|
T Consensus 275 f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~ 354 (456)
T cd07107 275 VLARVVERVAAIKVGDPTDPATTMGPLVSRQQYDRVMHYIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGM 354 (456)
T ss_pred HHHHHHHHHHhCCCCCCCCCCCCcCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEECCCCCC
Confidence 9999999999999999999999999999999999999999999999999999997532 358999999999999999
Q ss_pred cccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCC
Q 014515 316 LIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 395 (423)
Q Consensus 316 ~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~ 395 (423)
++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||+.....+.+||||+|+||+
T Consensus 355 ~i~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfgG~k~SG~ 434 (456)
T cd07107 355 RIAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTNDISQAHRTARRVEAGYVWINGSSRHFLGAPFGGVKNSGI 434 (456)
T ss_pred hhhhCCCCCceEEEEeeCCHHHHHHHHhCCCCcceEEEECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999877778899999999999
Q ss_pred CCcchHHHHHhhheeeEEEEe
Q 014515 396 GREKGSYSLSNYLQVKAVVTA 416 (423)
Q Consensus 396 g~~~g~~~l~~~~~~k~v~~~ 416 (423)
|+++|.+|+++||+.|+++++
T Consensus 435 G~~~g~~~~~~~~~~k~v~~~ 455 (456)
T cd07107 435 GREECLEELLSYTQEKNVNVR 455 (456)
T ss_pred CcCchHHHHHHhhceEEEEEe
Confidence 999999999999999999875
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. |
| >TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-88 Score=694.92 Aligned_cols=414 Identities=42% Similarity=0.739 Sum_probs=389.6
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhh-hcCccCCCCCCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK-IQGLTAPADGPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|++++++|++++++|+|||+.+++ .|+..+++.+++++...++ ..+...+.. ....+.+++
T Consensus 57 ~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 134 (488)
T TIGR02299 57 LKAAERKRYLHKIADLIEQHADEIAVLECLDCGQPLRQTR-QQVIRAAENFRFFADKCEEAMDGRTYPVD-THLNYTVRV 134 (488)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHH-HHHHHHHHHHHHHHHhHHHhcCCccccCC-CceEEEEEE
Confidence 5789999999999999999999999999999999999988 5999999999999887763 333333322 345678899
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccC
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 159 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~ 159 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++.+.++.|..|++
T Consensus 135 P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~ 214 (488)
T TIGR02299 135 PVGPVGLITPWNAPFMLSTWKIAPALAFGNTVVLKPAEWSPLTAARLAEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPD 214 (488)
T ss_pred ecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECchhchHHHHHHHHHHHHcCcChhheeEEeCCchHHHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999877778889999999
Q ss_pred cceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHH
Q 014515 160 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239 (423)
Q Consensus 160 v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~ 239 (423)
+|.|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+
T Consensus 215 v~~V~fTGS~~~G~~i~~~aa~-~l~~~~lElGGknp~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~ 293 (488)
T TIGR02299 215 VKAVSFTGETATGSIIMRNGAD-TLKRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAED 293 (488)
T ss_pred cCEEEEECcHHHHHHHHHHHHh-cCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHH
Confidence 9999999999999999999887 899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC-------CCCceeecEEEecCC
Q 014515 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-------AKGYYIKPTVFTGVK 312 (423)
Q Consensus 240 f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~-------~~g~~~~Ptvl~~~~ 312 (423)
|+++|+++++++++|+|.++++++||++++.+++++.+++++++++|+++++||...+ .+|+|++|||+.+++
T Consensus 294 f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~~~g~~~~Ptvl~~~~ 373 (488)
T TIGR02299 294 FVEKLVERVRAIRVGHPLDPETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTGAD 373 (488)
T ss_pred HHHHHHHHHhhCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCcccccccCCCCeEEccEEEecCC
Confidence 9999999999999999999999999999999999999999999999999999997532 248899999999999
Q ss_pred CcccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCC
Q 014515 313 DDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQ 392 (423)
Q Consensus 313 ~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~ 392 (423)
+++.+++||+||||++|++|+|++|||+++|+++|||++||||+|.++++++++++++|.|+||+.....+.+||||+|.
T Consensus 374 ~~~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~ 453 (488)
T TIGR02299 374 NHMRIAQEEIFGPVLTVIPFKDEEEAIEKANDTRYGLAGYVWTNDVGRAHRVALALEAGMIWVNSQNVRHLPTPFGGVKA 453 (488)
T ss_pred CCCchhhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999998776677899999999
Q ss_pred CCCCCcchHHHHHhhheeeEEEEec
Q 014515 393 SGQGREKGSYSLSNYLQVKAVVTAL 417 (423)
Q Consensus 393 SG~g~~~g~~~l~~~~~~k~v~~~~ 417 (423)
||+|+++|.+|+++||+.|++++++
T Consensus 454 SG~G~~~g~~~~~~~~~~k~i~~~~ 478 (488)
T TIGR02299 454 SGIGREGGTYSFDFYTETKNVALAL 478 (488)
T ss_pred CcCCccchHHHHHHHhceEEEEEec
Confidence 9999999999999999999998875
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. |
| >PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-88 Score=692.26 Aligned_cols=415 Identities=39% Similarity=0.678 Sum_probs=391.1
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCC-CCCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|++++++|++++++|+|||..++...|+..+++.+++++...+.+.+...+. ..+...+.+++
T Consensus 58 ~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~r~ 137 (475)
T PRK13473 58 TTPKERAEALLKLADAIEENADEFARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLEGKAAGEYLEGHTSMIRRD 137 (475)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEe
Confidence 57899999999999999999999999999999999988865699999999999998777665543221 12335678899
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccC
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 159 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~ 159 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++ +|+|++|++++++.+.+..|+.|++
T Consensus 138 P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~a-lP~gv~~~v~g~~~~~~~~l~~~~~ 216 (475)
T PRK13473 138 PVGVVASIAPWNYPLMMAAWKLAPALAAGNTVVLKPSEITPLTALKLAELAADI-LPPGVLNVVTGRGATVGDALVGHPK 216 (475)
T ss_pred cceeEEEEccCChHHHHHHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHh-CCcCcEEEEecCchHHHHHHhcCCC
Confidence 999999999999999999999999999999999999999999999999999999 9999999999877789999999999
Q ss_pred cceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHH
Q 014515 160 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239 (423)
Q Consensus 160 v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~ 239 (423)
+|.|+||||+++|+.|.+.++. +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+
T Consensus 217 vd~V~fTGs~~~g~~i~~~aa~-~~~~~~lElgG~~p~iV~~dADld~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~ 295 (475)
T PRK13473 217 VRMVSLTGSIATGKHVLSAAAD-SVKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIYDD 295 (475)
T ss_pred CCEEEEECcHHHHHHHHHHHhh-cCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHH
Confidence 9999999999999999999887 789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCC-CEEEeCCcccCCCCceeecEEEecCCCccccc
Q 014515 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG-AKLETGGERLGAKGYYIKPTVFTGVKDDMLIA 318 (423)
Q Consensus 240 f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~g-a~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~ 318 (423)
|+++|+++++++++|+|.++++++||++++.+++++.++++++.++| +++++||...+..|+|++|||+.++++++.++
T Consensus 296 f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~ 375 (475)
T PRK13473 296 LVAKLAAAVATLKVGDPDDEDTELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEAPDGKGYYYEPTLLAGARQDDEIV 375 (475)
T ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEECCCcCCCCceeEcCEEEecCCCCChhh
Confidence 99999999999999999999999999999999999999999999999 99999998654468999999999999999999
Q ss_pred ccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCCCc
Q 014515 319 KDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGRE 398 (423)
Q Consensus 319 ~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~ 398 (423)
+||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|.|+||++....+.+||||+|.||+|++
T Consensus 376 ~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~ 455 (475)
T PRK13473 376 QREVFGPVVSVTPFDDEDQAVRWANDSDYGLASSVWTRDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKQSGYGKD 455 (475)
T ss_pred hCCccCCeEEEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCcc
Confidence 99999999999999999999999999999999999999999999999999999999999776677899999999999999
Q ss_pred chHHHHHhhheeeEEEEec
Q 014515 399 KGSYSLSNYLQVKAVVTAL 417 (423)
Q Consensus 399 ~g~~~l~~~~~~k~v~~~~ 417 (423)
+|.+|+++||+.|++++++
T Consensus 456 ~g~~~~~~~t~~k~i~~~~ 474 (475)
T PRK13473 456 MSLYGLEDYTVVRHVMVKH 474 (475)
T ss_pred chHHHHHHHhceEEEEEec
Confidence 9999999999999998764
|
|
| >cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-88 Score=690.57 Aligned_cols=412 Identities=43% Similarity=0.713 Sum_probs=388.2
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCC-CCCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..+++. |+..+++.+++++...++..+...+. ..+...+..++
T Consensus 56 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~ 134 (473)
T cd07097 56 TSPEARADILDKAGDELEARKEELARLLTREEGKTLPEARG-EVTRAGQIFRYYAGEALRLSGETLPSTRPGVEVETTRE 134 (473)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEE
Confidence 57899999999999999999999999999999999999876 99999999999998877665543322 23455789999
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccC
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 159 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~ 159 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++++.+.+..|+.|++
T Consensus 135 P~GVv~~I~P~N~Pl~~~~~~i~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~l~~~~~ 214 (473)
T cd07097 135 PLGVVGLITPWNFPIAIPAWKIAPALAYGNTVVFKPAELTPASAWALVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPD 214 (473)
T ss_pred eeeeEEEEcccChHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCCCCcceEEeccCchHHHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999877778999999999
Q ss_pred cceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHH
Q 014515 160 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239 (423)
Q Consensus 160 v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~ 239 (423)
++.|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+
T Consensus 215 v~~v~fTGs~~~g~~i~~~aa~-~~~~~~lElGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~ 293 (473)
T cd07097 215 VDAVSFTGSTAVGRRIAAAAAA-RGARVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDR 293 (473)
T ss_pred CCEEEEECcHHHHHHHHHHHhc-cCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCeeEEEehhHHHH
Confidence 9999999999999999999887 789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC--CCCceeecEEEecCCCcccc
Q 014515 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLI 317 (423)
Q Consensus 240 f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~ 317 (423)
|+++|+++++++++|+|.|+++++||++++.+++++.+++++++++|+++++||...+ ..|+|++|||+.++++++.+
T Consensus 294 f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~ 373 (473)
T cd07097 294 FVEALVERTKALKVGDALDEGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGYYLAPALFAGVTNDMRI 373 (473)
T ss_pred HHHHHHHHHHhCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEeccCCCCChh
Confidence 9999999999999999999999999999999999999999999999999999997543 35789999999999999999
Q ss_pred cccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC-CCCCCCCCCCCCCCCC
Q 014515 318 AKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV-FDAAIPFGGYKQSGQG 396 (423)
Q Consensus 318 ~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~pfgG~~~SG~g 396 (423)
++||+||||++|++|+|+|||++++|+++|||+++|||+|.++++++++++++|.|+||+.+. ..+.+||||+|.||+|
T Consensus 374 ~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~PfGG~~~SG~G 453 (473)
T cd07097 374 AREEIFGPVAAVIRVRDYDEALAIANDTEFGLSAGIVTTSLKHATHFKRRVEAGVVMVNLPTAGVDYHVPFGGRKGSSYG 453 (473)
T ss_pred hhCCCcCceEEEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCc
Confidence 999999999999999999999999999999999999999999999999999999999998654 3467999999999999
Q ss_pred -CcchHHHHHhhheeeEEE
Q 014515 397 -REKGSYSLSNYLQVKAVV 414 (423)
Q Consensus 397 -~~~g~~~l~~~~~~k~v~ 414 (423)
+++|.+|+++|++.|+|.
T Consensus 454 ~~~~g~~~l~~f~~~k~v~ 472 (473)
T cd07097 454 PREQGEAALEFYTTIKTVY 472 (473)
T ss_pred ccCCcHHHHHHhhceeEEe
Confidence 899999999999999985
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. |
| >cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-88 Score=686.67 Aligned_cols=412 Identities=45% Similarity=0.767 Sum_probs=389.7
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCC-CCCCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP-ADGPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|++++++|++++++|+|||..+++. |+..+++.+++++.+.+...+...+ ...+...+..++
T Consensus 40 ~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (454)
T cd07118 40 MSGAERAAVLLKVADLIRARRERLALIETLESGKPISQARG-EIEGAADLWRYAASLARTLHGDSYNNLGDDMLGLVLRE 118 (454)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceeeEEee
Confidence 57899999999999999999999999999999999999875 9999999999999877666554332 122345678999
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccC
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 159 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~ 159 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++.+.+..|..|++
T Consensus 119 P~GvV~~I~p~N~P~~~~~~~i~~ALaaGN~Vi~Kps~~~p~~~~~l~~~~~~aG~P~g~~~~v~g~~~~~~~~L~~~~~ 198 (454)
T cd07118 119 PIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGTTLMLAELLIEAGLPAGVVNIVTGYGATVGQAMTEHPD 198 (454)
T ss_pred cceEEEEECCCCcHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHHHHHHHHHhcCCCccceEEEecCCchHHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999877778999999999
Q ss_pred cceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHH
Q 014515 160 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239 (423)
Q Consensus 160 v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~ 239 (423)
+|.|.||||+++|+.|.+.+++ +++|+++|+||+||+||++|||++.|++.+++++|+++||.|+++++||||++++|+
T Consensus 199 v~~v~ftGs~~~g~~i~~~aa~-~~~~~~lelgG~n~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~ 277 (454)
T cd07118 199 VDMVSFTGSTRVGKAIAAAAAR-NLKKVSLELGGKNPQIVFADADLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADA 277 (454)
T ss_pred CCEEEEECcHHHHHHHHHHHHh-cCCcEEeccCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHH
Confidence 9999999999999999999887 789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC-CCCceeecEEEecCCCccccc
Q 014515 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-AKGYYIKPTVFTGVKDDMLIA 318 (423)
Q Consensus 240 f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~ 318 (423)
|+++|+++++++++|+|.++++++||+++..+++++.++|++++++|+++++||...+ ..|+|++|||+.++++++.++
T Consensus 278 f~~~L~~~~~~l~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~ 357 (454)
T cd07118 278 FVAAVVARSRKVRVGDPLDPETKVGAIINEAQLAKITDYVDAGRAEGATLLLGGERLASAAGLFYQPTIFTDVTPDMAIA 357 (454)
T ss_pred HHHHHHHHHHhcCcCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCeEEeCEEEeCCCCCCHHH
Confidence 9999999999999999999999999999999999999999999999999999998654 368999999999999999999
Q ss_pred ccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCCCc
Q 014515 319 KDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGRE 398 (423)
Q Consensus 319 ~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~ 398 (423)
+||+||||++|++|+|++||++++|+++|||++||||+|.++++++++++++|.|+||+.....+.+||||+|.||+|++
T Consensus 358 ~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~~~SG~G~~ 437 (454)
T cd07118 358 REEIFGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKDIDTALTVARRIRAGTVWVNTFLDGSPELPFGGFKQSGIGRE 437 (454)
T ss_pred hCCCCCceEEEEEECCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccccCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999877778899999999999999
Q ss_pred chHHHHHhhheeeEEE
Q 014515 399 KGSYSLSNYLQVKAVV 414 (423)
Q Consensus 399 ~g~~~l~~~~~~k~v~ 414 (423)
+|.+++++||+.|+++
T Consensus 438 ~g~~~l~~~t~~k~~~ 453 (454)
T cd07118 438 LGRYGVEEYTELKTVH 453 (454)
T ss_pred chHHHHHHHhceeEEe
Confidence 9999999999999875
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. |
| >cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-88 Score=686.19 Aligned_cols=413 Identities=41% Similarity=0.656 Sum_probs=390.2
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCcc-CCC----CCCCcee
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT-APA----DGPYHVQ 75 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~-~~~----~~~~~~~ 75 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++...|+..+++.+++++..+++..+.. .+. ..+...+
T Consensus 39 ~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (459)
T cd07089 39 TDAEERARCLRQLHEALEARKEELRALLVAEVGAPVMTARAMQVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRV 118 (459)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCcccccCCCceeE
Confidence 58899999999999999999999999999999999977765699999999999998887765443 221 1245678
Q ss_pred EeeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhh
Q 014515 76 TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 155 (423)
Q Consensus 76 ~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~ 155 (423)
++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++.+.+..|+
T Consensus 119 ~~~~P~GVV~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~l~ 198 (459)
T cd07089 119 VRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAPDTPLSALLLGEIIAETDLPAGVVNVVTGSDNAVGEALT 198 (459)
T ss_pred EEEeeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999997777899999
Q ss_pred cccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCc
Q 014515 156 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES 235 (423)
Q Consensus 156 ~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~ 235 (423)
.||+++.|.||||+.+|+.|++.+++ +++|+++|+|||||+||++|+|++.|++.+++++|.|+||.|+++++||||++
T Consensus 199 ~~~~~~~v~ftGs~~~g~~v~~~aa~-~~~~~~lelgG~n~~iV~~dadl~~aa~~i~~~~~~~sGQ~C~a~~~v~V~~~ 277 (459)
T cd07089 199 TDPRVDMVSFTGSTAVGRRIMAQAAA-TLKRVLLELGGKSANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRS 277 (459)
T ss_pred cCCCCCEEEEECcHHHHHHHHHHHHh-cCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCcccCCeEEEEcHH
Confidence 99999999999999999999999887 78999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC--CCCceeecEEEecCCC
Q 014515 236 VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKD 313 (423)
Q Consensus 236 ~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~--~~g~~~~Ptvl~~~~~ 313 (423)
++++|+++|+++++++++|+|.++++++||+++..+++++++++++++++|+++++||.... ..|+|++|||+.++++
T Consensus 278 v~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~g~~~~Ptvl~~~~~ 357 (459)
T cd07089 278 RYDEVVEALAAAFEALPVGDPADPGTVMGPLISAAQRDRVEGYIARGRDEGARLVTGGGRPAGLDKGFYVEPTLFADVDN 357 (459)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEECCEEEEcCCC
Confidence 99999999999999999999999999999999999999999999999999999999997643 3689999999999999
Q ss_pred cccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCC
Q 014515 314 DMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQS 393 (423)
Q Consensus 314 ~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~S 393 (423)
++++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||+....++..||||+|.|
T Consensus 358 ~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~~~~G~v~iN~~~~~~~~~PfgG~k~S 437 (459)
T cd07089 358 DMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGGVWSADVDRAYRVARRIRTGSVGINGGGGYGPDAPFGGYKQS 437 (459)
T ss_pred CCHHHhCCCcCceEEEeccCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCcCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999998777788999999999
Q ss_pred CCCCcchHHHHHhhheeeEEE
Q 014515 394 GQGREKGSYSLSNYLQVKAVV 414 (423)
Q Consensus 394 G~g~~~g~~~l~~~~~~k~v~ 414 (423)
|+|+++|.+|+++||+.|+++
T Consensus 438 G~G~~~g~~~l~~ft~~k~v~ 458 (459)
T cd07089 438 GLGRENGIEGLEEFLETKSIA 458 (459)
T ss_pred cCCCCchHHHHHHhhceeEEe
Confidence 999999999999999999885
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. |
| >cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-88 Score=686.30 Aligned_cols=412 Identities=47% Similarity=0.807 Sum_probs=388.8
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcC---ccCCC-CCCCceeE
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG---LTAPA-DGPYHVQT 76 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~---~~~~~-~~~~~~~~ 76 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++.. |+..+++.+++++...+++.. ...+. ..+...+.
T Consensus 38 ~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (456)
T cd07110 38 TTGAERAKYLRAIAEGVRERREELAELEARDNGKPLDEAAW-DVDDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKARV 116 (456)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhhccCCccccCCCCCceeEE
Confidence 57899999999999999999999999999999999999875 999999999999988876632 11221 12456788
Q ss_pred eeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhc
Q 014515 77 LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALAS 156 (423)
Q Consensus 77 ~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~ 156 (423)
+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++.+.++.|+.
T Consensus 117 ~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~ 196 (456)
T cd07110 117 RREPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTSLTELELAEIAAEAGLPPGVLNVVTGTGDEAGAPLAA 196 (456)
T ss_pred EEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECcccchHHHHHHHHHHHHcCCCCCcEEEEecCchHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999977778999999
Q ss_pred ccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCcc
Q 014515 157 HMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 236 (423)
Q Consensus 157 ~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~ 236 (423)
||+++.|+||||+.+|+.|.+.+++ +++|+++|+|||||+||++|+|++.|++.+++++|+++||.|+++++||||+++
T Consensus 197 ~~~v~~V~fTGs~~~g~~v~~~aa~-~~~~~~lElgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i 275 (456)
T cd07110 197 HPGIDKISFTGSTATGSQVMQAAAQ-DIKPVSLELGGKSPIIVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESI 275 (456)
T ss_pred CCCCCEEEEECCHHHHHHHHHHHhh-cCCeEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHH
Confidence 9999999999999999999999887 789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC--CCCceeecEEEecCCCc
Q 014515 237 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDD 314 (423)
Q Consensus 237 ~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~--~~g~~~~Ptvl~~~~~~ 314 (423)
+|+|+++|+++++++++|+|.++++++||++++.+++++++++++++.+|+++++||.... ..|+|+.|||+.+++++
T Consensus 276 ~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~~v~~a~~~Ga~~~~gg~~~~~~~~~~~~~Ptvl~~v~~~ 355 (456)
T cd07110 276 ADAFLERLATAAEAIRVGDPLEEGVRLGPLVSQAQYEKVLSFIARGKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTD 355 (456)
T ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcccccCCCCcCCCEEEecCCCC
Confidence 9999999999999999999999999999999999999999999999999999999997643 46889999999999999
Q ss_pred ccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCC
Q 014515 315 MLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSG 394 (423)
Q Consensus 315 ~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG 394 (423)
+.++++|+||||++|++|+|.|||++++|+++|||+++|||+|.++++++++++++|.|+||+.+...+.+||||+|.||
T Consensus 356 ~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG 435 (456)
T cd07110 356 SRIWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVISRDAERCDRVAEALEAGIVWINCSQPCFPQAPWGGYKRSG 435 (456)
T ss_pred ChHhhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999877667789999999999
Q ss_pred CCCcchHHHHHhhheeeEEE
Q 014515 395 QGREKGSYSLSNYLQVKAVV 414 (423)
Q Consensus 395 ~g~~~g~~~l~~~~~~k~v~ 414 (423)
+|+++|++|+++||+.|+++
T Consensus 436 ~G~~~g~~~l~~~~~~k~i~ 455 (456)
T cd07110 436 IGRELGEWGLDNYLEVKQIT 455 (456)
T ss_pred CCccchHHHHHHhcceeEEe
Confidence 99999999999999999875
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. |
| >cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-88 Score=685.68 Aligned_cols=411 Identities=44% Similarity=0.746 Sum_probs=387.9
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
+|.++|.++|+++++.|++++++|++++++|+|||..+++. |+..+++.+++++.+.++..+...+...+...+.+++|
T Consensus 39 ~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P 117 (454)
T cd07109 39 LSPAERGRLLLRIARLIREHADELARLESLDTGKPLTQARA-DVEAAARYFEYYGGAADKLHGETIPLGPGYFVYTVREP 117 (454)
T ss_pred CCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEee
Confidence 57899999999999999999999999999999999999875 99999999999998877766554443345567899999
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 160 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v 160 (423)
+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++.+.++.|+.|+++
T Consensus 118 ~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~L~~~~~v 197 (454)
T cd07109 118 HGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLTALRLAELAEEAGLPAGALNVVTGLGAEAGAALVAHPGV 197 (454)
T ss_pred eeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999998777889999999999
Q ss_pred ceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHHH
Q 014515 161 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240 (423)
Q Consensus 161 ~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~f 240 (423)
|.|+||||+.+|+.|.+.+++ +++|+++|+|||||+||++|+|++.|++.+++++|.++||.|+++++||||++++|+|
T Consensus 198 ~~v~ftGs~~~g~~i~~~aa~-~~~p~~lElgG~~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f 276 (454)
T cd07109 198 DHISFTGSVETGIAVMRAAAE-NVVPVTLELGGKSPQIVFADADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEV 276 (454)
T ss_pred CEEEEECCHHHHHHHHHHHhh-cCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCccCcEEEEcHHHHHHH
Confidence 999999999999999999887 7899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC---CCCceeecEEEecCCCcccc
Q 014515 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG---AKGYYIKPTVFTGVKDDMLI 317 (423)
Q Consensus 241 ~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~---~~g~~~~Ptvl~~~~~~~~~ 317 (423)
+++|+++++++++|+|.+ ++++||++++++++++.+++++++++|+++++||.... ..|+|++|||+.++++++.+
T Consensus 277 ~~~l~~~~~~~~~G~p~~-~~~~gpli~~~~~~~~~~~i~~a~~~ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~ 355 (454)
T cd07109 277 LERLVERFRALRVGPGLE-DPDLGPLISAKQLDRVEGFVARARARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRL 355 (454)
T ss_pred HHHHHHHHHhCCCCCCcc-cCcCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCCcCcccCCCCcEECcEEEecCCCCChh
Confidence 999999999999999986 68999999999999999999999999999999987533 36889999999999999999
Q ss_pred cccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcC-CCCCCCCCCCCCCCCCC
Q 014515 318 AKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFD-VFDAAIPFGGYKQSGQG 396 (423)
Q Consensus 318 ~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~-~~~~~~pfgG~~~SG~g 396 (423)
++||+||||++|++|+|.||||+++|+++|||++||||+|.+.++++++++++|.|+||+.. ...+.+||||+|.||+|
T Consensus 356 ~~eE~fgPvl~v~~~~~~deAi~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G 435 (454)
T cd07109 356 AQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRDGDRALRVARRLRAGQVFVNNYGAGGGIELPFGGVKKSGHG 435 (454)
T ss_pred hhCCCCCceEEEEecCCHHHHHHHhhCCCCCceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCcCCcccCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999876 45667899999999999
Q ss_pred CcchHHHHHhhheeeEEE
Q 014515 397 REKGSYSLSNYLQVKAVV 414 (423)
Q Consensus 397 ~~~g~~~l~~~~~~k~v~ 414 (423)
+++|.+++++|++.|+++
T Consensus 436 ~~~g~~~~~~f~~~k~i~ 453 (454)
T cd07109 436 REKGLEALYNYTQTKTVA 453 (454)
T ss_pred ccchHHHHHHHhceeEEe
Confidence 999999999999999885
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. |
| >cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-88 Score=686.64 Aligned_cols=411 Identities=41% Similarity=0.695 Sum_probs=386.9
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCC-----CCCcee
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-----GPYHVQ 75 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~ 75 (423)
+|.++|.++|+++++.|++++++|++++++|+|||..++.. |+..+++.+++++...+...+...+.+ .+...+
T Consensus 40 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (456)
T cd07145 40 LPAYKRYKILMKVAELIERRKEELAKLLTIEVGKPIKQSRV-EVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRIAF 118 (456)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccCccccccCCceeE
Confidence 57899999999999999999999999999999999999886 999999999999987766555433222 134567
Q ss_pred EeeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhh
Q 014515 76 TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 155 (423)
Q Consensus 76 ~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~ 155 (423)
..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++.+.++.|+
T Consensus 119 ~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~ag~p~g~~~~v~g~~~~~~~~l~ 198 (456)
T cd07145 119 TVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSSNTPLTAIELAKILEEAGLPPGVINVVTGYGSEVGDEIV 198 (456)
T ss_pred EEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHcCCCcccEEEEeCCCchHHHHHh
Confidence 88999999999999999999999999999999999999999999999999999999999999999999997778899999
Q ss_pred cccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCc
Q 014515 156 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES 235 (423)
Q Consensus 156 ~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~ 235 (423)
.||+++.|.||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++
T Consensus 199 ~~~~v~~V~fTGs~~~g~~i~~~aa~-~~~~v~lElgG~n~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~ 277 (456)
T cd07145 199 TNPKVNMISFTGSTAVGLLIASKAGG-TGKKVALELGGSDPMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEE 277 (456)
T ss_pred cCCCCCEEEEECCHHHHHHHHHHHhh-cCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCccCeeEEEcHH
Confidence 99999999999999999999999887 78999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCcc
Q 014515 236 VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDM 315 (423)
Q Consensus 236 ~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~ 315 (423)
++|+|+++|+++++++++|+|.++++++||+++..+++++++++++++++|+++++||... .|+|++|||+.++++++
T Consensus 278 i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~vl~gg~~~--~g~~~~Ptvl~~~~~~~ 355 (456)
T cd07145 278 VYDKFLKLLVEKVKKLKVGDPLDESTDLGPLISPEAVERMENLVNDAVEKGGKILYGGKRD--EGSFFPPTVLENDTPDM 355 (456)
T ss_pred HHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCC--CCeEECCEeecCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999753 38999999999999999
Q ss_pred cccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCC-CCCCCCCCCCCC
Q 014515 316 LIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFD-AAIPFGGYKQSG 394 (423)
Q Consensus 316 ~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~-~~~pfgG~~~SG 394 (423)
++++||+||||++|++|+|+||||+++|++++||++||||+|.+++.++++++++|+|+||+.+... +.+||||+|+||
T Consensus 356 ~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~~~~g~v~vN~~~~~~~~~~pfgG~~~SG 435 (456)
T cd07145 356 IVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVFTNDINRALKVARELEAGGVVINDSTRFRWDNLPFGGFKKSG 435 (456)
T ss_pred hHhhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999876543 578999999999
Q ss_pred CCCcchHHHHHhhheeeEEEE
Q 014515 395 QGREKGSYSLSNYLQVKAVVT 415 (423)
Q Consensus 395 ~g~~~g~~~l~~~~~~k~v~~ 415 (423)
+|+++|++|+++|++.|+|.+
T Consensus 436 ~G~~~g~~~l~~f~~~k~v~~ 456 (456)
T cd07145 436 IGREGVRYTMLEMTEEKTIVI 456 (456)
T ss_pred CCcCchHHHHHHhhceeEEeC
Confidence 999999999999999998853
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. |
| >cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-88 Score=687.88 Aligned_cols=413 Identities=35% Similarity=0.494 Sum_probs=385.7
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCC-CCCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..+++. |+..+++.+++++...+...++..+. ..+...+..++
T Consensus 57 ~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 135 (478)
T cd07085 57 TPVLKRQQVMFKFRQLLEENLDELARLITLEHGKTLADARG-DVLRGLEVVEFACSIPHLLKGEYLENVARGIDTYSYRQ 135 (478)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhCCeecccCCCCceeEEEEe
Confidence 57899999999999999999999999999999999999874 99999999999987766555544332 22345789999
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccC
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 159 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~ 159 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++ +.+.+..|+.||+
T Consensus 136 P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VvlKps~~tp~~~~~l~~~l~~aGlP~gvv~~v~g-~~~~~~~L~~~~~ 214 (478)
T cd07085 136 PLGVVAGITPFNFPAMIPLWMFPMAIACGNTFVLKPSERVPGAAMRLAELLQEAGLPDGVLNVVHG-GKEAVNALLDHPD 214 (478)
T ss_pred cceEEEEECCCChHHHHHHHHHHHHHhcCCEEEEECCCcCcHHHHHHHHHHHHhCCCCCcEEEEec-CHHHHHHHhcCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999998 4567899999999
Q ss_pred cceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHH
Q 014515 160 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239 (423)
Q Consensus 160 v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~ 239 (423)
++.|+||||+.+|+.|++.++. +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+
T Consensus 215 v~~V~fTGs~~~g~~i~~~aa~-~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~ 293 (478)
T cd07085 215 IKAVSFVGSTPVGEYIYERAAA-NGKRVQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADE 293 (478)
T ss_pred cCEEEEECCHHHHHHHHHHHhh-cCCcEEecCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEeHHHHHH
Confidence 9999999999999999998887 789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC----CCCceeecEEEecCCCcc
Q 014515 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDM 315 (423)
Q Consensus 240 f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~ 315 (423)
|+++|+++++++++|+|.++++++||++++.+++++.+++++++++|+++++||.... .+|+|++|||+.++++++
T Consensus 294 f~~~L~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~ 373 (478)
T cd07085 294 WIPKLVERAKKLKVGAGDDPGADMGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPGYENGNFVGPTILDNVTPDM 373 (478)
T ss_pred HHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCcCCCCeEEcCEEEecCCCCC
Confidence 9999999999999999999999999999999999999999999999999999997432 358999999999999999
Q ss_pred cccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC-CCCCCCCCCCCCC
Q 014515 316 LIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSG 394 (423)
Q Consensus 316 ~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~pfgG~~~SG 394 (423)
.++++|+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||+.... .+.+||||+|.||
T Consensus 374 ~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfgG~k~SG 453 (478)
T cd07085 374 KIYKEEIFGPVLSIVRVDTLDEAIAIINANPYGNGAAIFTRSGAAARKFQREVDAGMVGINVPIPVPLAFFSFGGWKGSF 453 (478)
T ss_pred hhhhCcCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCccccc
Confidence 999999999999999999999999999999999999999999999999999999999999986443 3678999999999
Q ss_pred CC--CcchHHHHHhhheeeEEEEe
Q 014515 395 QG--REKGSYSLSNYLQVKAVVTA 416 (423)
Q Consensus 395 ~g--~~~g~~~l~~~~~~k~v~~~ 416 (423)
+| +++|.+|+++||+.|+|++.
T Consensus 454 ~G~~~~~g~~~~~~~~~~k~v~~~ 477 (478)
T cd07085 454 FGDLHFYGKDGVRFYTQTKTVTSR 477 (478)
T ss_pred CCCCcCChHHHHHHhcceEEEEEe
Confidence 99 47899999999999999765
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. |
| >cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-88 Score=685.38 Aligned_cols=411 Identities=39% Similarity=0.633 Sum_probs=387.2
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCC-CCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|++++++|++++++|+|||..++.. |+..+++.+++++.+.++..+...+.. .+...+..++
T Consensus 51 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-Ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (465)
T cd07151 51 TLPQERAEILEKAAQILEERRDEIVEWLIRESGSTRIKANI-EWGAAMAITREAATFPLRMEGRILPSDVPGKENRVYRE 129 (465)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHhHHHhcCccccCCCCCceeEEEEe
Confidence 57899999999999999999999999999999999999875 999999999999987766655443321 3455788899
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHH-HHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhccc
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA-LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHM 158 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~-~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~ 158 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++ ..+.+++.++|+|+|+++++++++.+.+..|+.||
T Consensus 130 P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~~~l~~aG~P~gvv~~v~g~~~~~~~~l~~~~ 209 (465)
T cd07151 130 PLGVVGVISPWNFPLHLSMRSVAPALALGNAVVLKPASDTPITGGLLLAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHP 209 (465)
T ss_pred cceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCCCCcHhHHHHHHHHHHHcCcCccceEEEecCchhhHHHHhcCC
Confidence 99999999999999999999999999999999999999999996 68999999999999999999987778899999999
Q ss_pred CcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHH
Q 014515 159 EVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 238 (423)
Q Consensus 159 ~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~ 238 (423)
.++.|.||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|
T Consensus 210 ~v~~v~fTGs~~~g~~i~~~aa~-~~~~~~lElGGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~ 288 (465)
T cd07151 210 VPRLISFTGSTPVGRHIGELAGR-HLKKVALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYD 288 (465)
T ss_pred CCCEEEEECCHHHHHHHHHHHHh-cCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHHHHH
Confidence 99999999999999999999887 88999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCccccc
Q 014515 239 QFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIA 318 (423)
Q Consensus 239 ~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~ 318 (423)
+|+++|+++++++++|+|.++++.+||+++..+++++.+++++++++|+++++||.. .|+|++|||+.+++++++++
T Consensus 289 ~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~ 365 (465)
T cd07151 289 EFVEKFVERVKALPYGDPSDPDTVVGPLINESQVDGLLDKIEQAVEEGATLLVGGEA---EGNVLEPTVLSDVTNDMEIA 365 (465)
T ss_pred HHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhCCCEEEecCCc---CCEEEccEEEeCCCCCCchh
Confidence 999999999999999999999999999999999999999999999999999999964 58899999999999999999
Q ss_pred ccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC-CCCCCCCCCCCCCCCC
Q 014515 319 KDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGR 397 (423)
Q Consensus 319 ~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~pfgG~~~SG~g~ 397 (423)
+||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||+.+.. .+.+||||+|.||+|+
T Consensus 366 ~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~ 445 (465)
T cd07151 366 REEIFGPVAPIIKADDEEEALELANDTEYGLSGAVFTSDLERGVQFARRIDAGMTHINDQPVNDEPHVPFGGEKNSGLGR 445 (465)
T ss_pred hCcCcCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCCc
Confidence 999999999999999999999999999999999999999999999999999999999987654 3679999999999999
Q ss_pred cchHHHHHhhheeeEEEEe
Q 014515 398 EKGSYSLSNYLQVKAVVTA 416 (423)
Q Consensus 398 ~~g~~~l~~~~~~k~v~~~ 416 (423)
++|++++++||+.|+++++
T Consensus 446 ~~g~~~l~~~t~~k~~~~~ 464 (465)
T cd07151 446 FNGEWALEEFTTDKWISVQ 464 (465)
T ss_pred CChHHHHHHhhceEEEEec
Confidence 9999999999999998764
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. |
| >cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-88 Score=686.96 Aligned_cols=414 Identities=35% Similarity=0.582 Sum_probs=388.8
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCC-CCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++.. |+..+++.+++++...+...+...+.. .+...+..++
T Consensus 54 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~ 132 (478)
T cd07086 54 VPAPRRGEIVRQIGEALRKKKEALGRLVSLEMGKILPEGLG-EVQEMIDICDYAVGLSRMLYGLTIPSERPGHRLMEQWN 132 (478)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEe
Confidence 57899999999999999999999999999999999999875 999999999999988877665443321 2345678999
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHc----CCCCCcEEEEeCCchhHHHHhh
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNIVSGYGPTAGAALA 155 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~a----g~P~g~v~~v~~~~~~~~~~l~ 155 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++ |+|+|+++++++++. .+..|.
T Consensus 133 P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~al~~~glP~gvv~~v~g~~~-~~~~L~ 211 (478)
T cd07086 133 PLGVVGVITAFNFPVAVPGWNAAIALVCGNTVVWKPSETTPLTAIAVTKILAEVLEKNGLPPGVVNLVTGGGD-GGELLV 211 (478)
T ss_pred cceeEEEECCCCcHHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhhhccCCCccceEEEecCch-hHHHHh
Confidence 999999999999999999999999999999999999999999999999999999 999999999998655 889999
Q ss_pred cccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCc
Q 014515 156 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES 235 (423)
Q Consensus 156 ~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~ 235 (423)
.||++|.|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.|++++|.|+||.|+++++||||++
T Consensus 212 ~~~~vd~v~fTGs~~~g~~i~~~aa~-~~~~~~lElGG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~ 290 (478)
T cd07086 212 HDPRVPLVSFTGSTEVGRRVGETVAR-RFGRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHES 290 (478)
T ss_pred cCCCCCEEEEECcHHHHHHHHHHHhc-cCCcEEeecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCCCcCCeEEEEcHH
Confidence 99999999999999999999999887 78999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCC--CCceeecEEEecCCC
Q 014515 236 VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA--KGYYIKPTVFTGVKD 313 (423)
Q Consensus 236 ~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~--~g~~~~Ptvl~~~~~ 313 (423)
++|+|+++|+++++++++|+|.++++++||++++.+++++++++++++++|+++++||..... .|+|++|||+.++++
T Consensus 291 i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~ 370 (478)
T cd07086 291 VYDEFLERLVKAYKQVRIGDPLDEGTLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGEPGNYVEPTIVTGVTD 370 (478)
T ss_pred HHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEecCCCC
Confidence 999999999999999999999999999999999999999999999999999999999976543 588999999999999
Q ss_pred cccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHh--cceeEEEEcCcCC-CCCCCCCCCC
Q 014515 314 DMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRA--LRVGSVWINCFDV-FDAAIPFGGY 390 (423)
Q Consensus 314 ~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~--l~~g~v~iN~~~~-~~~~~pfgG~ 390 (423)
++.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++++ +++|+|+||+.+. ..+.+||||+
T Consensus 371 ~~~~~~eE~FgPVl~v~~~~~~deai~~~n~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~v~iN~~~~~~~~~~PfgG~ 450 (478)
T cd07086 371 DARIVQEETFAPILYVIKFDSLEEAIAINNDVPQGLSSSIFTEDLREAFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGE 450 (478)
T ss_pred CChhhcCCCcCCEEEEEEeCCHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHhcCcccceeEEECCCCCCCCCCCCCCCc
Confidence 999999999999999999999999999999999999999999999999999999 9999999998654 3467999999
Q ss_pred CCCCCCCcchHHHHHhhheeeEEEEec
Q 014515 391 KQSGQGREKGSYSLSNYLQVKAVVTAL 417 (423)
Q Consensus 391 ~~SG~g~~~g~~~l~~~~~~k~v~~~~ 417 (423)
|.||+|+++|.+++++|++.|+|++++
T Consensus 451 ~~SG~G~~~g~~~~~~f~~~k~i~~~~ 477 (478)
T cd07086 451 KETGGGRESGSDAWKQYMRRSTCTINY 477 (478)
T ss_pred ccccCCccchHHHHHHhhceEEEEEeC
Confidence 999999999999999999999998763
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). |
| >cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-88 Score=685.40 Aligned_cols=413 Identities=46% Similarity=0.797 Sum_probs=390.6
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++.. |+..+++.+++++.+.+...++..+...+...+.+++|
T Consensus 38 ~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 116 (457)
T cd07090 38 TSGMERGRILRKAADLLRERNDEIARLETIDNGKPIEEARV-DIDSSADCLEYYAGLAPTLSGEHVPLPGGSFAYTRREP 116 (457)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhCCeeeccCCCceEEEEEee
Confidence 57899999999999999999999999999999999988875 99999999999998887765544433345667889999
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 160 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v 160 (423)
+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++ +.++.|+.|+++
T Consensus 117 ~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~~~~~~~l~~~~~~aGlP~g~~~~v~g~~-~~~~~l~~~~~v 195 (457)
T cd07090 117 LGVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTALLLAEILTEAGLPDGVFNVVQGGG-ETGQLLCEHPDV 195 (457)
T ss_pred cceEEEECCCccHHHHHHHHHHHHHhcCCeeeecCCCcCcHHHHHHHHHHHHcCCCcccEEEEeCCh-hhHHHHhcCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999854 588999999999
Q ss_pred ceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHHH
Q 014515 161 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240 (423)
Q Consensus 161 ~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~f 240 (423)
++|+||||+.+|+.|.+.++. +++|+++|+|||||+||++|||++.|++.+++++|.++||.|+++++||||++++|+|
T Consensus 196 ~~v~fTGs~~~g~~i~~~aa~-~~~~~~lelgG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f 274 (457)
T cd07090 196 AKVSFTGSVPTGKKVMSAAAK-GIKHVTLELGGKSPLIIFDDADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEF 274 (457)
T ss_pred CEEEEECcHHHHHHHHHHHhc-cCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHH
Confidence 999999999999999999887 8899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC-----CCCceeecEEEecCCCcc
Q 014515 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-----AKGYYIKPTVFTGVKDDM 315 (423)
Q Consensus 241 ~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~-----~~g~~~~Ptvl~~~~~~~ 315 (423)
+++|+++++++++|+|.++++++||+++.++++++.++|++++.+|+++++||.... ..|+|++|||+.++++++
T Consensus 275 ~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~Ptvl~~~~~~~ 354 (457)
T cd07090 275 TERLVERTKKIRIGDPLDEDTQMGALISEEHLEKVLGYIESAKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDM 354 (457)
T ss_pred HHHHHHHHHhcCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHHCCCEEEECCCcCcccccCCCCeeECCEEEecCCCCC
Confidence 999999999999999999999999999999999999999999999999999997532 258899999999999999
Q ss_pred cccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCC
Q 014515 316 LIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 395 (423)
Q Consensus 316 ~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~ 395 (423)
+++++|+||||++|++|+|.||||+++|+++|||++||||+|.+.++++++++++|.|+||+.+...+.+||||+|.||+
T Consensus 355 ~~~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~ 434 (457)
T cd07090 355 TIVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTRDLQRAHRVIAQLQAGTCWINTYNISPVEVPFGGYKQSGF 434 (457)
T ss_pred hHHhCCCCCCeEEEEEECCHHHHHHHHhCCCcCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCCccCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999877778899999999999
Q ss_pred CCcchHHHHHhhheeeEEEEe
Q 014515 396 GREKGSYSLSNYLQVKAVVTA 416 (423)
Q Consensus 396 g~~~g~~~l~~~~~~k~v~~~ 416 (423)
|+++|.+++++||+.|++++.
T Consensus 435 G~~~g~~~~~~f~~~k~~~~~ 455 (457)
T cd07090 435 GRENGTAALEHYTQLKTVYVE 455 (457)
T ss_pred CccchHHHHHHHhCeEEEEEe
Confidence 999999999999999998764
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. |
| >cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-88 Score=685.44 Aligned_cols=413 Identities=31% Similarity=0.533 Sum_probs=382.3
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCC-CCCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|++++++|++++++|+|||..++.. |+..+++.+++++.+.+...+...+. ..+...+..++
T Consensus 53 ~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (474)
T cd07130 53 VPAPKRGEIVRQIGDALRKKKEALGKLVSLEMGKILPEGLG-EVQEMIDICDFAVGLSRQLYGLTIPSERPGHRMMEQWN 131 (474)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHhHHHhcCccccCCCCCceEEEEEe
Confidence 58899999999999999999999999999999999999874 99999999999988766655443332 12345678899
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHH----HHHcCCCCCcEEEEeCCchhHHHHhh
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKL----LHEAGLPPGVLNIVSGYGPTAGAALA 155 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~----l~~ag~P~g~v~~v~~~~~~~~~~l~ 155 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.++ +.++|+|+|++++++++ .+.++.|+
T Consensus 132 P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~l~~~~~~~aglP~gv~~~v~g~-~~~~~~L~ 210 (474)
T cd07130 132 PLGVVGVITAFNFPVAVWGWNAAIALVCGNVVVWKPSPTTPLTAIAVTKIVARVLEKNGLPGAIASLVCGG-ADVGEALV 210 (474)
T ss_pred cceeEEEEccCCCHHHHHHHHhhHHHHcCCeEEeeCCccCHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCC-hhHHHHHh
Confidence 99999999999999999999999999999999999999999999887766 46889999999999984 45789999
Q ss_pred cccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCc
Q 014515 156 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES 235 (423)
Q Consensus 156 ~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~ 235 (423)
.||++|+|+||||+++|+.|++.+++ +++|+++|+|||||+||++|+|++.|++.+++++|.|+||.|+++++||||++
T Consensus 211 ~~~~vd~V~fTGs~~~g~~i~~~aa~-~~~~~~lElGGk~p~iV~~dadl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~ 289 (474)
T cd07130 211 KDPRVPLVSFTGSTAVGRQVGQAVAA-RFGRSLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHES 289 (474)
T ss_pred cCCCCCEEEEECchHHHHHHHHHHHh-cCCCEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEcHh
Confidence 99999999999999999999998887 78999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCcc
Q 014515 236 VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDM 315 (423)
Q Consensus 236 ~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~ 315 (423)
++|+|+++|+++++++++|+|.++++++||+++..+++++++++++++++|+++++||...+..|+|++|||+.++++ |
T Consensus 290 i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~~~~-~ 368 (474)
T cd07130 290 IYDEVLERLKKAYKQVRIGDPLDDGTLVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVIDGPGNYVEPTIVEGLSD-A 368 (474)
T ss_pred HHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEccEEEecCCC-C
Confidence 999999999999999999999999999999999999999999999999999999999986555689999999987766 9
Q ss_pred cccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHh--cceeEEEEcCcCC-CCCCCCCCCCCC
Q 014515 316 LIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRA--LRVGSVWINCFDV-FDAAIPFGGYKQ 392 (423)
Q Consensus 316 ~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~--l~~g~v~iN~~~~-~~~~~pfgG~~~ 392 (423)
.+++||+||||++|++|+|++||++++|+++|||++||||+|.+++++++++ +++|.|+||+.+. ..+.+||||+|.
T Consensus 369 ~i~~eE~FGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~ 448 (474)
T cd07130 369 PIVKEETFAPILYVLKFDTLEEAIAWNNEVPQGLSSSIFTTDLRNAFRWLGPKGSDCGIVNVNIGTSGAEIGGAFGGEKE 448 (474)
T ss_pred HHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhhcCcceEEEEEcCCCCCCCCCCCcCcccc
Confidence 9999999999999999999999999999999999999999999999999987 8999999998654 457899999999
Q ss_pred CCCCCcchHHHHHhhheeeEEEEec
Q 014515 393 SGQGREKGSYSLSNYLQVKAVVTAL 417 (423)
Q Consensus 393 SG~g~~~g~~~l~~~~~~k~v~~~~ 417 (423)
||+|+++|.+++++|++.|++++.+
T Consensus 449 SG~G~~~g~~~~~~f~~~k~~~~~~ 473 (474)
T cd07130 449 TGGGRESGSDAWKQYMRRSTCTINY 473 (474)
T ss_pred ccCCccchHHHHHHHhheEEEEEec
Confidence 9999999999999999999987763
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. |
| >cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-88 Score=685.13 Aligned_cols=414 Identities=50% Similarity=0.843 Sum_probs=390.5
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++...|+..+++.+++++.+.++..+...+...+...+..++|
T Consensus 45 ~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 124 (462)
T cd07112 45 LSPAERKAVLLRLADLIEAHRDELALLETLDMGKPISDALAVDVPSAANTFRWYAEAIDKVYGEVAPTGPDALALITREP 124 (462)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCCCCeEEEEEEee
Confidence 47899999999999999999999999999999999998865699999999999998887766543333334467789999
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 160 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v 160 (423)
+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++.+.+..|..|+++
T Consensus 125 ~GvV~~i~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v 204 (462)
T cd07112 125 LGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAEQSPLTALRLAELALEAGLPAGVLNVVPGFGHTAGEALGLHMDV 204 (462)
T ss_pred eeeEEEECCCchHHHHHHHHHHHHHHcCCeeeeeCCCCCCHHHHHHHHHHHhcCCCCCcEEEEeCCCchHHHHHhcCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999777889999999999
Q ss_pred ceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCC-CHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHH
Q 014515 161 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDA-DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239 (423)
Q Consensus 161 ~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~a-d~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~ 239 (423)
+.|+||||+.+|+.|++.++..+++|+++|+||+||+||++|+ |++.|++.+++++|.|+||.|+++++||||++++++
T Consensus 205 ~~V~fTGs~~~g~~i~~~aa~~~~~~~~lelgG~n~~iV~~da~dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~ 284 (462)
T cd07112 205 DALAFTGSTEVGRRFLEYSGQSNLKRVWLECGGKSPNIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDE 284 (462)
T ss_pred CEEEEECCHHHHHHHHHHHHHhcCCEEEecCCCCCeEEECCCCcCHHHHHHHHHHHHHhccCCCCCCCeeEEEcHHHHHH
Confidence 9999999999999999988844789999999999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC--CCCceeecEEEecCCCcccc
Q 014515 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLI 317 (423)
Q Consensus 240 f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~ 317 (423)
|+++|+++++++++|+|.++++++||+++.+++++++++|++++++|+++++||.... ..|+|++|||+.++++++++
T Consensus 285 f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~ 364 (462)
T cd07112 285 FLEKVVAAAREWKPGDPLDPATRMGALVSEAHFDKVLGYIESGKAEGARLVAGGKRVLTETGGFFVEPTVFDGVTPDMRI 364 (462)
T ss_pred HHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEecCCCCCChH
Confidence 9999999999999999999999999999999999999999999999999999997532 25889999999999999999
Q ss_pred cccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCCC
Q 014515 318 AKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGR 397 (423)
Q Consensus 318 ~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~ 397 (423)
++||+||||++|++|+|.+|||+++|+++|||++||||+|.+.+.++++++++|.|+||+.+...+.+||||+|.||+|+
T Consensus 365 ~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~k~SG~G~ 444 (462)
T cd07112 365 AREEIFGPVLSVITFDSEEEAVALANDSVYGLAASVWTSDLSRAHRVARRLRAGTVWVNCFDEGDITTPFGGFKQSGNGR 444 (462)
T ss_pred HhCCCCCceEEEEEeCCHHHHHHHHhCCCccceEEEEcCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCCCcccccCCc
Confidence 99999999999999999999999999999999999999999999999999999999999987777889999999999999
Q ss_pred cchHHHHHhhheeeEEE
Q 014515 398 EKGSYSLSNYLQVKAVV 414 (423)
Q Consensus 398 ~~g~~~l~~~~~~k~v~ 414 (423)
++|.+++++|++.|+++
T Consensus 445 ~~g~~~~~~f~~~k~i~ 461 (462)
T cd07112 445 DKSLHALDKYTELKTTW 461 (462)
T ss_pred cchHHHHHHHhceeEEE
Confidence 99999999999999885
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. |
| >PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-87 Score=686.33 Aligned_cols=415 Identities=41% Similarity=0.712 Sum_probs=390.6
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
+|.++|+++|+++++.|+++.++|++++++|+|||+.++...|+..+++.+++++...++..+...+...+...+..++|
T Consensus 78 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P 157 (494)
T PRK09847 78 SSPAKRKAVLNKLADLMEAHAEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEVATTSSHELAMIVREP 157 (494)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEecc
Confidence 57899999999999999999999999999999999988765699999999999998887776654443334456789999
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 160 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v 160 (423)
+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++++.+.+..|+.|+++
T Consensus 158 ~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~L~~~~~v 237 (494)
T PRK09847 158 VGVIAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLSAIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDI 237 (494)
T ss_pred eeEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCcCcEEEEeCCChhHHHHHhcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999998777889999999999
Q ss_pred ceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCC-CHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHH
Q 014515 161 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDA-DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239 (423)
Q Consensus 161 ~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~a-d~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~ 239 (423)
|.|+||||+.+|+.|.+.++..+++|+++|+||+||+||.+|+ |++.|++.+++++|.|+||.|+++++||||++++|+
T Consensus 238 d~v~fTGs~~~g~~v~~~aa~~~~~~~~lElGGk~~~iV~~daaDl~~Aa~~i~~~~~~~aGQ~C~a~~rv~V~~~i~d~ 317 (494)
T PRK09847 238 DAIAFTGSTRTGKQLLKDAGDSNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADE 317 (494)
T ss_pred CEEEEECCHHHHHHHHHHhhhhCCCeEEEecCCCCeeEEcCCccCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHH
Confidence 9999999999999999988743789999999999999999997 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCcccccc
Q 014515 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAK 319 (423)
Q Consensus 240 f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~ 319 (423)
|+++|+++++.+++|+|.++++++||+++..+++++.++|++++++| ++++||... ..+.|++|||+.++++++++++
T Consensus 318 f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~G-~i~~gg~~~-~~~~~~~Ptvl~~v~~~~~~~~ 395 (494)
T PRK09847 318 FLALLKQQAQNWQPGHPLDPATTMGTLIDCAHADSVHSFIREGESKG-QLLLDGRNA-GLAAAIGPTIFVDVDPNASLSR 395 (494)
T ss_pred HHHHHHHHHHhcCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCC-eEEECCccC-CCCceEeeEEEeCCCCCChHHh
Confidence 99999999999999999999999999999999999999999999999 999998753 3578999999999999999999
Q ss_pred cccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCCCcc
Q 014515 320 DEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREK 399 (423)
Q Consensus 320 ~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~ 399 (423)
||+||||++|++|+|++|||+++|+++|||++||||+|.+++.++++++++|+|+||+.+...+.+||||+|.||+|+++
T Consensus 396 eE~FgPvl~v~~~~~~~eai~~~n~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~ 475 (494)
T PRK09847 396 EEIFGPVLVVTRFTSEEQALQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVFVNNYNDGDMTVPFGGYKQSGNGRDK 475 (494)
T ss_pred CcCcCceEEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCcccccCccc
Confidence 99999999999999999999999999999999999999999999999999999999998777778999999999999999
Q ss_pred hHHHHHhhheeeEEEEec
Q 014515 400 GSYSLSNYLQVKAVVTAL 417 (423)
Q Consensus 400 g~~~l~~~~~~k~v~~~~ 417 (423)
|.+|+++||+.|+|++..
T Consensus 476 g~~~l~~ft~~k~v~~~~ 493 (494)
T PRK09847 476 SLHALEKFTELKTIWISL 493 (494)
T ss_pred hHHHHHHhhceEEEEEec
Confidence 999999999999998764
|
|
| >cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-88 Score=686.58 Aligned_cols=413 Identities=45% Similarity=0.756 Sum_probs=385.5
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||+.++...|+..+++.+++++...+...+...+...+...+.+++|
T Consensus 57 ~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P 136 (479)
T cd07116 57 TSVAERANILNKIADRMEANLEMLAVAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGSISEIDENTVAYHFHEP 136 (479)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhHHHcCCeeecCCCCceEEEEEec
Confidence 57899999999999999999999999999999999988875699999999999998876655443333334456789999
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 160 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v 160 (423)
+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++ +|+|++|+++|.+.+.+..|+.||++
T Consensus 137 ~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~a-lP~gvv~~v~g~~~~~~~~L~~~~~v 215 (479)
T cd07116 137 LGVVGQIIPWNFPLLMATWKLAPALAAGNCVVLKPAEQTPASILVLMELIGDL-LPPGVVNVVNGFGLEAGKPLASSKRI 215 (479)
T ss_pred cceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHH-CCcCcEEEEecCchhHHHHHhcCCCc
Confidence 99999999999999999999999999999999999999999999999999998 99999999998777889999999999
Q ss_pred ceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCC------CCHHHHHHHHHHHHHhccCCcccCCCeEEEeC
Q 014515 161 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCED------ADVDKAAELAHYALFFNQGQCCCAGSRTFVHE 234 (423)
Q Consensus 161 ~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~------ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~ 234 (423)
|.|+||||+++|+.|.+.+++ +++|+++|+|||||+||++| +|++.|++.++++. +|+||.|+++++||||+
T Consensus 216 ~~V~fTGS~~~G~~i~~~aa~-~~~p~~lElGGk~p~iV~~da~~~~~adl~~A~~~i~~~~-~~~GQ~C~a~~rv~V~~ 293 (479)
T cd07116 216 AKVAFTGETTTGRLIMQYASE-NIIPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFA-LNQGEVCTCPSRALIQE 293 (479)
T ss_pred CEEEEECCHHHHHHHHHHHHc-CCCeEEEECCCCCeEEEecCcccccccCHHHHHHHHHHHH-hcCCCCCCCCeEEEEcH
Confidence 999999999999999999987 78999999999999999987 79999999999865 69999999999999999
Q ss_pred ccHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC----CCCceeecEEEec
Q 014515 235 SVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTG 310 (423)
Q Consensus 235 ~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~----~~g~~~~Ptvl~~ 310 (423)
+++|+|+++|.++++++++|+|.++++.+||+++.++++++++++++++++|+++++||.... ..|+|+.|||+.+
T Consensus 294 ~i~d~f~~~l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~ 373 (479)
T cd07116 294 SIYDRFMERALERVKAIKQGNPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTTFKG 373 (479)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeeecCeEEcc
Confidence 999999999999999999999999999999999999999999999999999999999997532 2588999999998
Q ss_pred CCCcccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCC
Q 014515 311 VKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGY 390 (423)
Q Consensus 311 ~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~ 390 (423)
++ ++.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|.|+||+.+...+.+||||+
T Consensus 374 ~~-~~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~ 452 (479)
T cd07116 374 GN-KMRIFQEEIFGPVLAVTTFKDEEEALEIANDTLYGLGAGVWTRDGNTAYRMGRGIQAGRVWTNCYHLYPAHAAFGGY 452 (479)
T ss_pred CC-CChhhhcCCcCceEEEEEeCCHHHHHHHHhCCcccceEEEEcCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCcCCC
Confidence 74 99999999999999999999999999999999999999999999999999999999999999988777778999999
Q ss_pred CCCCCCCcchHHHHHhhheeeEEEEec
Q 014515 391 KQSGQGREKGSYSLSNYLQVKAVVTAL 417 (423)
Q Consensus 391 ~~SG~g~~~g~~~l~~~~~~k~v~~~~ 417 (423)
|+||+|+++|.+++++||+.|++++++
T Consensus 453 k~SG~G~~~g~~~l~~~~~~k~~~~~~ 479 (479)
T cd07116 453 KQSGIGRENHKMMLDHYQQTKNLLVSY 479 (479)
T ss_pred ccCcCCccChHHHHHHhhceEEEEEeC
Confidence 999999999999999999999997753
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. |
| >cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-87 Score=690.82 Aligned_cols=415 Identities=39% Similarity=0.611 Sum_probs=390.2
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++.. |+..+++.+++++.++++..+...+...+...+.+++|
T Consensus 88 ~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~-ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 166 (512)
T cd07124 88 TPPEERARLLLRAAALLRRRRFELAAWMVLEVGKNWAEADA-DVAEAIDFLEYYAREMLRLRGFPVEMVPGEDNRYVYRP 166 (512)
T ss_pred CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCcCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEEec
Confidence 57899999999999999999999999999999999999986 99999999999999887775544433334567899999
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 160 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v 160 (423)
+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++.+.+..|..||++
T Consensus 167 ~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v 246 (512)
T cd07124 167 LGVGAVISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIAAKLVEILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDV 246 (512)
T ss_pred ceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccccHHHHHHHHHHHHhCcCCCceEEeccCchHHHHHHhcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999777889999999999
Q ss_pred ceEeeecCchHHHHHHHHHhhC-----CCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCc
Q 014515 161 DKLAFTGSTTTGKIVLQLAAKS-----NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES 235 (423)
Q Consensus 161 ~~v~~tGs~~~~~~v~~~~a~~-----~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~ 235 (423)
|.|+||||+.+|+.|++.++.. +++|+++|+|||||+||++|+|++.|++.+++++|.|+||.|+++++||||++
T Consensus 247 ~~V~fTGs~~~g~~i~~~aa~~~~~~~~l~~~~lElgGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~ 326 (512)
T cd07124 247 RFIAFTGSREVGLRIYERAAKVQPGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHES 326 (512)
T ss_pred CEEEEeCchHHHHHHHHHHhcccccccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCccccceEEEEcHH
Confidence 9999999999999999988863 58999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCC--CCceeecEEEecCCC
Q 014515 236 VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA--KGYYIKPTVFTGVKD 313 (423)
Q Consensus 236 ~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~--~g~~~~Ptvl~~~~~ 313 (423)
++|+|+++|++++.++++|+|.|+++++||++++.+++++.++|++++. |+++++||...+. .|+|++|||+.++++
T Consensus 327 i~~~f~~~l~~~~~~~~~g~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~-g~~vl~gG~~~~~~~~g~~~~Ptvl~~v~~ 405 (512)
T cd07124 327 VYDEFLERLVERTKALKVGDPEDPEVYMGPVIDKGARDRIRRYIEIGKS-EGRLLLGGEVLELAAEGYFVQPTIFADVPP 405 (512)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCcccCCcCHHHHHHHHHHHHHHHh-CCEEEecCccCCCCCCCceEcCEEEecCCC
Confidence 9999999999999999999999999999999999999999999999988 8999999976542 689999999999999
Q ss_pred cccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC--CCCCCCCCCCC
Q 014515 314 DMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYK 391 (423)
Q Consensus 314 ~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~pfgG~~ 391 (423)
++.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+.++++++++|.|+||+.+. ..+.+||||+|
T Consensus 406 ~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~~PfGG~k 485 (512)
T cd07124 406 DHRLAQEEIFGPVLAVIKAKDFDEALEIANDTEYGLTGGVFSRSPEHLERARREFEVGNLYANRKITGALVGRQPFGGFK 485 (512)
T ss_pred CChHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccc
Confidence 9999999999999999999999999999999999999999999999999999999999999998653 33668999999
Q ss_pred CCCCC-CcchHHHHHhhheeeEEEEec
Q 014515 392 QSGQG-REKGSYSLSNYLQVKAVVTAL 417 (423)
Q Consensus 392 ~SG~g-~~~g~~~l~~~~~~k~v~~~~ 417 (423)
+||+| +++|.+|+++||+.|++++++
T Consensus 486 ~SG~G~~~~g~~~~~~~t~~k~v~~~~ 512 (512)
T cd07124 486 MSGTGSKAGGPDYLLQFMQPKTVTENF 512 (512)
T ss_pred cccCCCccCcHHHHHHhccEEEEEEeC
Confidence 99999 788999999999999998764
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. |
| >cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-87 Score=681.10 Aligned_cols=408 Identities=44% Similarity=0.710 Sum_probs=384.4
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++.. |+..+++.+++++.... .....+...+...+.+++|
T Consensus 38 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~P 114 (446)
T cd07106 38 TPLEERRAALLAIADAIEANAEELARLLTLEQGKPLAEAQF-EVGGAVAWLRYTASLDL--PDEVIEDDDTRRVELRRKP 114 (446)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHhhhh--cCccccCCCCceEEEEEEc
Confidence 57899999999999999999999999999999999998875 99999999999987652 2222222234567899999
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 160 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v 160 (423)
+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++ +|+|+++++++ +.+.+..|..|+++
T Consensus 115 ~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~~~~~-lP~g~~~~v~g-~~~~~~~l~~~~~v 192 (446)
T cd07106 115 LGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCTLKLGELAQEV-LPPGVLNVVSG-GDELGPALTSHPDI 192 (446)
T ss_pred ceEEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHh-CCcCeEEEeeC-ChhHHHHHhcCCCC
Confidence 99999999999999999999999999999999999999999999999999996 99999999998 45688999999999
Q ss_pred ceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHHH
Q 014515 161 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240 (423)
Q Consensus 161 ~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~f 240 (423)
|.|+||||+.+|+.|.+.++. +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|
T Consensus 193 d~V~fTGs~~~g~~v~~~aa~-~~~~~~lElGG~~p~iV~~dADl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~v~d~f 271 (446)
T cd07106 193 RKISFTGSTATGKKVMASAAK-TLKRVTLELGGNDAAIVLPDVDIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEF 271 (446)
T ss_pred CEEEEECCHHHHHHHHHHHHh-cCCeeEEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCcEEEEccccHHHH
Confidence 999999999999999999887 7899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCccccccc
Q 014515 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKD 320 (423)
Q Consensus 241 ~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~ 320 (423)
+++|+++++++++|+|.++++++||++++.++++++++++++..+|+++++||...+..|+|++|||+.+++++++++++
T Consensus 272 ~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~ 351 (446)
T cd07106 272 CEALVALAKAAVVGDGLDPGTTLGPVQNKMQYDKVKELVEDAKAKGAKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVDE 351 (446)
T ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeeEcCEEEeCCCCCCHHHhc
Confidence 99999999999999999999999999999999999999999999999999999865446899999999999999999999
Q ss_pred ccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCCCcch
Q 014515 321 EIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKG 400 (423)
Q Consensus 321 E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g 400 (423)
|+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||+.....+.+||||+|+||+|+++|
T Consensus 352 E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~~~~G~v~iN~~~~~~~~~pfGG~~~SG~G~~~g 431 (446)
T cd07106 352 EQFGPVLPVLKYSDEDEVIARANDSEYGLGASVWSSDLERAEAVARRLEAGTVWINTHGALDPDAPFGGHKQSGIGVEFG 431 (446)
T ss_pred CccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCccccccCccch
Confidence 99999999999999999999999999999999999999999999999999999999988778889999999999999999
Q ss_pred HHHHHhhheeeEEE
Q 014515 401 SYSLSNYLQVKAVV 414 (423)
Q Consensus 401 ~~~l~~~~~~k~v~ 414 (423)
.+|+++||+.|+|+
T Consensus 432 ~~~~~~~t~~k~v~ 445 (446)
T cd07106 432 IEGLKEYTQTQVIN 445 (446)
T ss_pred HHHHHHhhceeEEe
Confidence 99999999999885
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. |
| >TIGR01804 BADH glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-87 Score=684.81 Aligned_cols=410 Identities=45% Similarity=0.785 Sum_probs=386.8
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
+|.++|.++|+++++.|++++++|++++++|+|||..++...|+..+++.+++++...++..+...+.......+..++|
T Consensus 54 ~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P 133 (467)
T TIGR01804 54 MTPEERGRILRRIAELIRERNEELAKLETLDTGKTLEETSVADMDDIADVFEFFAGLADKDGGEIIPLPIPSFSYTIREP 133 (467)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCCccccCCCCceEEEEEee
Confidence 57899999999999999999999999999999999999855599999999999998887765544332222456789999
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 160 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v 160 (423)
+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|+++++++++.+.++.|+.|+++
T Consensus 134 ~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v 213 (467)
T TIGR01804 134 LGVCVGIGAWNYPLQIASWKIAPALAAGNAMVFKPSEITPLTALKVAELMEEAGLPDGVFNVVLGKGAEVGEPLVNHKDV 213 (467)
T ss_pred eeEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCccCcHHHHHHHHHHHHcCcCcCcEEEEeCCcHHHHHHHhcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999998767889999999999
Q ss_pred ceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHHH
Q 014515 161 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240 (423)
Q Consensus 161 ~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~f 240 (423)
|.|+||||+++|+.|.+.++. +++|+++|+|||||+||++|+|++.|++.+++++|.++||.|+++++||||++++|+|
T Consensus 214 ~~V~fTGs~~~g~~v~~~a~~-~l~~~~lElGG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f 292 (467)
T TIGR01804 214 AKVSFTGGVPTGKKIMAAAAD-HLKHVTMELGGKSPLIVFDDADLELAVDQAMNGNFFSAGQVCSNGTRVFVHNKIKEKF 292 (467)
T ss_pred CEEEEECcHHHHHHHHHHHHh-cCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCCEEEEcHHHHHHH
Confidence 999999999999999999887 7899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC----CCCceeecEEEecCCCccc
Q 014515 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDML 316 (423)
Q Consensus 241 ~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~ 316 (423)
+++|+++++++++|+|.++++++||+++..+++++.+++++++.+|+++++||...+ ..|+|++|||+.+++++++
T Consensus 293 ~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~ 372 (467)
T TIGR01804 293 EARLVERTKRIKLGDGFDEATEMGPLISAEHRDKVESYIEKGKEEGATLACGGKRPEREGLQNGFFIEPTVFTDCTDDMT 372 (467)
T ss_pred HHHHHHHHHhCCCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCeEEeeEEEeCCCCCCh
Confidence 999999999999999999999999999999999999999999999999999997543 2588999999999999999
Q ss_pred ccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCC
Q 014515 317 IAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQG 396 (423)
Q Consensus 317 ~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g 396 (423)
+++||+||||++|++|+|.||||+++|+++|||++||||+|.+++.++++++++|+|+||+++...+.+||||+|+||+|
T Consensus 373 ~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G 452 (467)
T TIGR01804 373 IVREEIFGPVMTVLTFSSEDEVIARANDTIYGLAAGVFTADLGRAHRVANQLKAGTVWINDFHPYPAEAPWGGYKQSGIG 452 (467)
T ss_pred HHhCCCCCceEEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCccC
Confidence 99999999999999999999999999999999999999999999999999999999999998777778999999999999
Q ss_pred CcchHHHHHhhheee
Q 014515 397 REKGSYSLSNYLQVK 411 (423)
Q Consensus 397 ~~~g~~~l~~~~~~k 411 (423)
+++|.+++++||+.|
T Consensus 453 ~~~g~~~~~~~~~~~ 467 (467)
T TIGR01804 453 RENGKAGLAEYTEVK 467 (467)
T ss_pred CCChHHHHHHHhccC
Confidence 999999999999875
|
Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171). |
| >cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-87 Score=681.68 Aligned_cols=409 Identities=34% Similarity=0.497 Sum_probs=383.1
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCC-----CCCCcee
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-----DGPYHVQ 75 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-----~~~~~~~ 75 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++.. |+..+++.+++++..+++..+...+. ..+...+
T Consensus 41 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (455)
T cd07148 41 LPAHERIAILERLADLMEERADELALLIAREGGKPLVDAKV-EVTRAIDGVELAADELGQLGGREIPMGLTPASAGRIAF 119 (455)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEE
Confidence 57899999999999999999999999999999999999875 99999999999998887765543221 1234568
Q ss_pred EeeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhh
Q 014515 76 TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 155 (423)
Q Consensus 76 ~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~ 155 (423)
..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++++++++ .+.++.|+
T Consensus 120 ~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~-~~~~~~L~ 198 (455)
T cd07148 120 TTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPALATPLSCLAFVDLLHEAGLPEGWCQAVPCE-NAVAEKLV 198 (455)
T ss_pred EEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEeeCCCcccHHHHHHHHHHHHcCCCcCcEEEEeCC-hHHHHHHh
Confidence 89999999999999999999999999999999999999999999999999999999999999999999984 46789999
Q ss_pred cccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCc
Q 014515 156 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES 235 (423)
Q Consensus 156 ~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~ 235 (423)
.||++|.|.||||+++|+.|++.++. .+|+++|+|||||+||++|+|++.|++.+++++|.++||.|+++++||||++
T Consensus 199 ~~~~v~~v~fTGs~~~G~~i~~~aa~--~~~~~lElGG~~p~iV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~ 276 (455)
T cd07148 199 TDPRVAFFSFIGSARVGWMLRSKLAP--GTRCALEHGGAAPVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAE 276 (455)
T ss_pred cCCCCCEEEEECCHHHHHHHHHHhhc--CCcEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCccCCeEEEEcHh
Confidence 99999999999999999999998875 4899999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCcc
Q 014515 236 VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDM 315 (423)
Q Consensus 236 ~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~ 315 (423)
++|+|+++|+++++++++|+|.++++++||++++.+++++++++++++++|+++++||... .++|++|||+.++++++
T Consensus 277 i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~--~~~~~~Ptvl~~~~~~~ 354 (455)
T cd07148 277 IADDFAQRLAAAAEKLVVGDPTDPDTEVGPLIRPREVDRVEEWVNEAVAAGARLLCGGKRL--SDTTYAPTVLLDPPRDA 354 (455)
T ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccC--CCCeEcCEEEeCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999764 47899999999999999
Q ss_pred cccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCC-CCCCCCCCCCCC
Q 014515 316 LIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFD-AAIPFGGYKQSG 394 (423)
Q Consensus 316 ~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~-~~~pfgG~~~SG 394 (423)
++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|.|+||+.+... +.+||||+|.||
T Consensus 355 ~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~a~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG 434 (455)
T cd07148 355 KVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFTKDLDVALKAVRRLDATAVMVNDHTAFRVDWMPFAGRRQSG 434 (455)
T ss_pred HHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHHcCcCeEEECCCCCCCCCCCCCCcchhcc
Confidence 9999999999999999999999999999999999999999999999999999999999999876443 468999999999
Q ss_pred CCCcchHHHHHhhheeeEEEE
Q 014515 395 QGREKGSYSLSNYLQVKAVVT 415 (423)
Q Consensus 395 ~g~~~g~~~l~~~~~~k~v~~ 415 (423)
+|+++|.+++++|++.|++++
T Consensus 435 ~G~~~g~~~~~~~~~~k~~~~ 455 (455)
T cd07148 435 YGTGGIPYTMHDMTQEKMAVI 455 (455)
T ss_pred cCCCchHHHHHHhhceeEEeC
Confidence 999999999999999998853
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-87 Score=682.22 Aligned_cols=409 Identities=35% Similarity=0.546 Sum_probs=382.8
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCC-----CCCCCcee
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP-----ADGPYHVQ 75 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~-----~~~~~~~~ 75 (423)
++..+|+++|+++++.|+++.++|++++++|+|||..++.. |+..+++.+++++..+.+..+...+ ...+...+
T Consensus 55 ~~~~~R~~~l~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (472)
T TIGR03250 55 LTRYERSAILDRAAALLAARKEEISDLITLESGLSKKDSLY-EVGRVADVLTFAAAEALRDDGQIFSCDLTPHGKARKVF 133 (472)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccccCCCCCCceEE
Confidence 57899999999999999999999999999999999999875 9999999999999887665543321 11234567
Q ss_pred Eeeccc-eeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHh
Q 014515 76 TLHEPI-GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAAL 154 (423)
Q Consensus 76 ~~~~P~-Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l 154 (423)
..++|+ |||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++.+.+.+..|
T Consensus 134 ~~~~P~~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l 213 (472)
T TIGR03250 134 TQREPLLGVISAITPFNHPMNQVAHKIAPAIATNNRMVVKPSEKTPLSALYLADILYEAGLPPQMLQVVTGDPREIADEL 213 (472)
T ss_pred EEEcCCCCEEEEEcCCcHHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcccEEEEecCchHHHHHH
Confidence 899998 9999999999999999999999999999999999999999999999999999999999999998777789999
Q ss_pred hcccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeC
Q 014515 155 ASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHE 234 (423)
Q Consensus 155 ~~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~ 234 (423)
+.||+++.|.||||+.+|+.|++.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+
T Consensus 214 ~~~~~v~~v~fTGs~~~g~~i~~~a~---~~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~ 290 (472)
T TIGR03250 214 ITNPHVDLVTFTGGVAIGKYIAARAG---YRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQE 290 (472)
T ss_pred hcCCCCCEEEEECcHHHHHHHHHHhc---CCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhhCCCCCCCcEEEEeH
Confidence 99999999999999999999998764 589999999999999999999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCc
Q 014515 235 SVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDD 314 (423)
Q Consensus 235 ~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~ 314 (423)
+++|+|+++|+++++++++|+|.++++++||+++..+++++++++++++++|+++++||.. .|+|++|||+.+++++
T Consensus 291 ~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~---~g~~~~PTvl~~v~~~ 367 (472)
T TIGR03250 291 SVADRFTELLVEKTRAWRYGDPMDPSVDMGTVIDEAAAILFEARVNEAIAQGARLLLGNVR---DGALYAPTVLDRVDPS 367 (472)
T ss_pred hHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCc---CCEEEcCEEEeCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999964 5899999999999999
Q ss_pred ccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCC-CCCCCCCCCCC
Q 014515 315 MLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFD-AAIPFGGYKQS 393 (423)
Q Consensus 315 ~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~-~~~pfgG~~~S 393 (423)
|++++||+||||++|++|+|.+||++++|+++|||++||||+|.+++.++++++++|+||||+.+... +.+||||+|+|
T Consensus 368 ~~i~~eE~FGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~S 447 (472)
T TIGR03250 368 MTLVREETFGPVSPVIRFCDIDDAIRISNSTAYGLSSGVCTNRLDYITRFIAELQVGTVNVWEVPGYRLELTPFGGIKDS 447 (472)
T ss_pred ChHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCccceEEEEcCCHHHHHHHHHHCCcceEEEcCCCCCCCCCCCCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999875443 55899999999
Q ss_pred CCC-CcchHHHHHhhheeeEEEEe
Q 014515 394 GQG-REKGSYSLSNYLQVKAVVTA 416 (423)
Q Consensus 394 G~g-~~~g~~~l~~~~~~k~v~~~ 416 (423)
|+| +++|.+|+++||+.|+++++
T Consensus 448 G~G~~~g~~~~l~~ft~~k~i~~~ 471 (472)
T TIGR03250 448 GLGYKEGVQEAMKSFTNLKTYSLP 471 (472)
T ss_pred cCCCCCChHHHHHHhhceEEEEEe
Confidence 999 57789999999999999876
|
It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. |
| >cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-87 Score=679.61 Aligned_cols=410 Identities=38% Similarity=0.568 Sum_probs=382.8
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccC-C--CCCCCceeEe
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA-P--ADGPYHVQTL 77 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~-~--~~~~~~~~~~ 77 (423)
+|.++|.++|+++++.|++++++|++++++|+|||..++.. |+..+++.+++++..+.+...... + .......+.+
T Consensus 37 ~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (454)
T cd07101 37 RPFAERAAVFLRFHDLVLERRDELLDLIQLETGKARRHAFE-EVLDVAIVARYYARRAERLLKPRRRRGAIPVLTRTTVN 115 (454)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHH-HHHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEE
Confidence 57899999999999999999999999999999999998864 999999999999988766544321 1 1123466889
Q ss_pred eccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcc
Q 014515 78 HEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH 157 (423)
Q Consensus 78 ~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~ 157 (423)
++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++.+.+..|+.|
T Consensus 116 ~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~ 195 (454)
T cd07101 116 RRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTALTALWAVELLIEAGLPRDLWQVVTGPGSEVGGAIVDN 195 (454)
T ss_pred EEeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHcCcCCCcEEEEeCCcHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999877888999986
Q ss_pred cCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccH
Q 014515 158 MEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 237 (423)
Q Consensus 158 ~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~ 237 (423)
++.|.||||+++|+.|++.+++ +++|+++|+||+||+||++|||++.|++.+++++|.|+||.|+++++||||++++
T Consensus 196 --~~~V~fTGs~~~g~~i~~~aa~-~~~~~~lElgG~~p~iV~~dAdl~~a~~~i~~~~~~~sGQ~C~a~~rv~V~~~i~ 272 (454)
T cd07101 196 --ADYVMFTGSTATGRVVAERAGR-RLIGCSLELGGKNPMIVLEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVY 272 (454)
T ss_pred --CCEEEEECCHHHHHHHHHHHHh-cCCcEEEECCCCceEEECCCCCHHHHHHHHHHHHHhcCCCCcccCeEEEEcHHHH
Confidence 6899999999999999999887 7899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC-CCCceeecEEEecCCCccc
Q 014515 238 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-AKGYYIKPTVFTGVKDDML 316 (423)
Q Consensus 238 ~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~-~~g~~~~Ptvl~~~~~~~~ 316 (423)
|+|+++|+++++++++|+|.++++++||+++..+++++++++++++++|+++++||.... ..|+|++|||+.++++++.
T Consensus 273 d~f~~~L~~~~~~~~~G~~~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~vl~gg~~~~~~~~~~~~Ptvl~~v~~~~~ 352 (454)
T cd07101 273 DEFVRRFVARTRALRLGAALDYGPDMGSLISQAQLDRVTAHVDDAVAKGATVLAGGRARPDLGPYFYEPTVLTGVTEDME 352 (454)
T ss_pred HHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCeEEcCEEEeCCCCCCH
Confidence 999999999999999999999999999999999999999999999999999999996432 3578999999999999999
Q ss_pred ccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC---CCCCCCCCCCCCC
Q 014515 317 IAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV---FDAAIPFGGYKQS 393 (423)
Q Consensus 317 ~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~---~~~~~pfgG~~~S 393 (423)
+++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||+... ..+.+||||+|.|
T Consensus 353 ~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~~PfgG~k~S 432 (454)
T cd07101 353 LFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASVWTRDGARGRRIAARLRAGTVNVNEGYAAAWASIDAPMGGMKDS 432 (454)
T ss_pred HHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCCCcCcCCCCCCCCccccc
Confidence 9999999999999999999999999999999999999999999999999999999999998643 3467899999999
Q ss_pred CCCCcchHHHHHhhheeeEEE
Q 014515 394 GQGREKGSYSLSNYLQVKAVV 414 (423)
Q Consensus 394 G~g~~~g~~~l~~~~~~k~v~ 414 (423)
|+|+++|.+|+++||+.|+++
T Consensus 433 G~G~~~g~~~~~~~~~~k~v~ 453 (454)
T cd07101 433 GLGRRHGAEGLLKYTETQTVA 453 (454)
T ss_pred ccCccchHHHHHHhcceEEEe
Confidence 999999999999999999886
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). |
| >cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-87 Score=682.07 Aligned_cols=412 Identities=41% Similarity=0.696 Sum_probs=389.5
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCC-CCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..+++. |+..+++.+++++.++.+..+...+.. .+...+.+++
T Consensus 54 ~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 132 (468)
T cd07088 54 LPAIERAAYLRKLADLIRENADELAKLIVEEQGKTLSLARV-EVEFTADYIDYMAEWARRIEGEIIPSDRPNENIFIFKV 132 (468)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhCCccccCccccceeEEEEe
Confidence 57899999999999999999999999999999999999875 999999999999988877655444332 2456788999
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccC
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 159 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~ 159 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++.+.++.|+.|++
T Consensus 133 P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VVlKps~~~p~~~~~l~~~~~~aglP~gvv~~v~g~~~~~~~~l~~~~~ 212 (468)
T cd07088 133 PIGVVAGILPWNFPFFLIARKLAPALVTGNTIVIKPSEETPLNALEFAELVDEAGLPAGVLNIVTGRGSVVGDALVAHPK 212 (468)
T ss_pred cceeEEEEccCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999977778899999999
Q ss_pred cceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHH
Q 014515 160 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239 (423)
Q Consensus 160 v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~ 239 (423)
+|.|.||||+.+|+.|.+.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+
T Consensus 213 v~~V~ftGs~~~g~~i~~~aa~-~~~~~~lelGG~~~~iV~~dadl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~i~d~ 291 (468)
T cd07088 213 VGMISLTGSTEAGQKIMEAAAE-NITKVSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDE 291 (468)
T ss_pred CCEEEEECcHHHHHHHHHHHHh-cCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHhcccCcCCcCCeEEEEcHHHHHH
Confidence 9999999999999999999887 889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC-CCCceeecEEEecCCCccccc
Q 014515 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-AKGYYIKPTVFTGVKDDMLIA 318 (423)
Q Consensus 240 f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~ 318 (423)
|+++|+++++++++|+|.++++++||++++.+++++.+++++++.+|+++++||...+ ..|+|++|||+.++++++.++
T Consensus 292 f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~vl~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~ 371 (468)
T cd07088 292 FMEKLVEKMKAVKVGDPFDAATDMGPLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYEPTVLTNVRQDMEIV 371 (468)
T ss_pred HHHHHHHHHHhcCCCCCCCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceeEcCEEEecCCCCCchh
Confidence 9999999999999999999999999999999999999999999999999999997643 368999999999999999999
Q ss_pred ccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCCCc
Q 014515 319 KDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGRE 398 (423)
Q Consensus 319 ~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~ 398 (423)
++|+||||++|++|+|+|||++++|+++|||++||||+|.++++++++++++|.|+||+.....+..||||+|.||+|++
T Consensus 372 ~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~k~SG~G~~ 451 (468)
T cd07088 372 QEEIFGPVLPVVKFSSLDEAIELANDSEYGLTSYIYTENLNTAMRATNELEFGETYINRENFEAMQGFHAGWKKSGLGGA 451 (468)
T ss_pred hCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccccCCcC
Confidence 99999999999999999999999999999999999999999999999999999999998776556679999999999999
Q ss_pred chHHHHHhhheeeEEE
Q 014515 399 KGSYSLSNYLQVKAVV 414 (423)
Q Consensus 399 ~g~~~l~~~~~~k~v~ 414 (423)
+|++|+++||+.|+|.
T Consensus 452 ~g~~~l~~~t~~k~v~ 467 (468)
T cd07088 452 DGKHGLEEYLQTKVVY 467 (468)
T ss_pred chHHHHHHHhceeEEe
Confidence 9999999999999885
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. |
| >cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-87 Score=679.45 Aligned_cols=412 Identities=48% Similarity=0.810 Sum_probs=390.1
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCC-CCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|.+++++|++++++|+|||..++.. |+..+++.+++++.+.++..+...+.. .+...+..++
T Consensus 40 ~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (457)
T cd07114 40 LTPTERGKLLRRLADLIEANAEELAELETRDNGKLIRETRA-QVRYLAEWYRYYAGLADKIEGAVIPVDKGDYLNFTRRE 118 (457)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEe
Confidence 57899999999999999999999999999999999999875 999999999999988776655443322 3456788999
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccC
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 159 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~ 159 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|+|+++++++.+.+..|..|++
T Consensus 119 P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~Vilkps~~~p~~~~~l~~~l~~aglP~~vv~~v~g~~~~~~~~l~~~~~ 198 (457)
T cd07114 119 PLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPASTLELAKLAEEAGFPPGVVNVVTGFGPETGEALVEHPL 198 (457)
T ss_pred cceEEEEECCCccHHHHHHHHHHHHHhcCCeEEeECCccchHHHHHHHHHHHHcCcCCCcEEEEeCCCchHHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999977778899999999
Q ss_pred cceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHH
Q 014515 160 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239 (423)
Q Consensus 160 v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~ 239 (423)
+++|+||||+.+|+.|++.+++ +++|+++|+||+||+||++|||++.|++.|++++|.++||.|+++++||||++++++
T Consensus 199 i~~V~ftGs~~~g~~v~~~aa~-~~~~~~lelgG~~~~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~ 277 (457)
T cd07114 199 VAKIAFTGGTETGRHIARAAAE-NLAPVTLELGGKSPNIVFDDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDE 277 (457)
T ss_pred CCEEEEECCHHHHHHHHHHHHh-cCCeEEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHH
Confidence 9999999999999999999887 789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC----CCCceeecEEEecCCCcc
Q 014515 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDM 315 (423)
Q Consensus 240 f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~ 315 (423)
|+++|+++++++++|+|.++++++||+++..+++++++++++++++|+++++||...+ ..|.|++|||+.++++++
T Consensus 278 f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~ 357 (457)
T cd07114 278 FVERLVARARAIRVGDPLDPETQMGPLATERQLEKVERYVARAREEGARVLTGGERPSGADLGAGYFFEPTILADVTNDM 357 (457)
T ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCCEECCEEEeCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999997543 357999999999999999
Q ss_pred cccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCC
Q 014515 316 LIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 395 (423)
Q Consensus 316 ~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~ 395 (423)
.++++|+||||++|++|+|.||||+++|+++|||++||||+|.+.++++++++++|.|+||+.+...+.+||||+|.||+
T Consensus 358 ~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~ift~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~k~SG~ 437 (457)
T cd07114 358 RIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGIWTRDLARAHRVARAIEAGTVWVNTYRALSPSSPFGGFKDSGI 437 (457)
T ss_pred hhhhcCCcCceEEEeccCCHHHHHHHhhCCCcCceeEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCCCCccCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999877788899999999999
Q ss_pred CCcchHHHHHhhheeeEEE
Q 014515 396 GREKGSYSLSNYLQVKAVV 414 (423)
Q Consensus 396 g~~~g~~~l~~~~~~k~v~ 414 (423)
|+++|.+++++||+.|+++
T Consensus 438 G~~~g~~~~~~f~~~k~~~ 456 (457)
T cd07114 438 GRENGIEAIREYTQTKSVW 456 (457)
T ss_pred CccchHHHHHHHhceeEEe
Confidence 9999999999999999885
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. |
| >cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-87 Score=676.41 Aligned_cols=408 Identities=39% Similarity=0.615 Sum_probs=384.2
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++.. |+..+++.+++++...++..+...+...+...+.+++|
T Consensus 32 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~i~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~P 110 (443)
T cd07152 32 TPPRERAAVLRRAADLLEEHADEIADWIVRESGSIRPKAGF-EVGAAIGELHEAAGLPTQPQGEILPSAPGRLSLARRVP 110 (443)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHhHHHhCCccccccCCceeEEEEec
Confidence 57899999999999999999999999999999999988875 99999999999998776555444443345567889999
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHH-HHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccC
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA-LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 159 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~-~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~ 159 (423)
+|||++|+|||||+...++++++||++||+||+|||+.+|.++ ..+.+++.++|+|+|+++++++ +.+.+..|..||+
T Consensus 111 ~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~~l~~~~~~ag~P~gvv~~v~g-~~~~~~~l~~~~~ 189 (443)
T cd07152 111 LGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVIARLFEEAGLPAGVLHVLPG-GADAGEALVEDPN 189 (443)
T ss_pred ceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCcccchhHHHHHHHHHHHhCcCcCcEEEecC-ChHHHHHHhcCCC
Confidence 9999999999999999999999999999999999999999996 7899999999999999999998 5668899999999
Q ss_pred cceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHH
Q 014515 160 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239 (423)
Q Consensus 160 v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~ 239 (423)
+|.|+||||+.+|+.|.+.+++ +++|+++|+|||||+||++|+|++.|++.+++++|.|+||.|+++++||||++++|+
T Consensus 190 v~~V~fTGs~~~g~~i~~~aa~-~~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~ 268 (443)
T cd07152 190 VAMISFTGSTAVGRKVGEAAGR-HLKKVSLELGGKNALIVLDDADLDLAASNGAWGAFLHQGQICMAAGRHLVHESVADA 268 (443)
T ss_pred CCEEEEECCHHHHHHHHHHHHh-cCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCcCCeeEEEcHHHHHH
Confidence 9999999999999999999887 789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCcccccc
Q 014515 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAK 319 (423)
Q Consensus 240 f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~ 319 (423)
|+++|+++++++++|+|.++++++||+++..+++++.+++++++.+|+++++||.. .|+|++|||+.++++++++++
T Consensus 269 f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~ 345 (443)
T cd07152 269 YTAKLAAKAKHLPVGDPATGQVALGPLINARQLDRVHAIVDDSVAAGARLEAGGTY---DGLFYRPTVLSGVKPGMPAFD 345 (443)
T ss_pred HHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhCCCEEEeccCc---CCEEEcCEEEecCCCCChhhh
Confidence 99999999999999999999999999999999999999999999999999999974 479999999999999999999
Q ss_pred cccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCC-CCCCCCCCCCCCCC-C
Q 014515 320 DEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFD-AAIPFGGYKQSGQG-R 397 (423)
Q Consensus 320 ~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~-~~~pfgG~~~SG~g-~ 397 (423)
||+||||++|++|+|.|||++++|+++|||++||||+|.+++.++++++++|.|+||+.+... +.+||||+|.||+| +
T Consensus 346 eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~pfGG~~~SG~G~~ 425 (443)
T cd07152 346 EEIFGPVAPVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALADRLRTGMLHINDQTVNDEPHNPFGGMGASGNGSR 425 (443)
T ss_pred ccccCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCCCc
Confidence 999999999999999999999999999999999999999999999999999999999876544 67999999999999 8
Q ss_pred cchHHHHHhhheeeEEE
Q 014515 398 EKGSYSLSNYLQVKAVV 414 (423)
Q Consensus 398 ~~g~~~l~~~~~~k~v~ 414 (423)
++|++++++|++.|+++
T Consensus 426 ~~g~~~l~~~~~~k~~~ 442 (443)
T cd07152 426 FGGPANWEEFTQWQWVT 442 (443)
T ss_pred cCcHHHHHHhhceeEEe
Confidence 88999999999999875
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. |
| >cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-87 Score=685.08 Aligned_cols=414 Identities=29% Similarity=0.438 Sum_probs=383.6
Q ss_pred CCHHHHHHHHHHHHHHHHH-cHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCC-CCCCCceeEee
Q 014515 1 MTAYERSKIILRFADLLER-HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP-ADGPYHVQTLH 78 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~-~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 78 (423)
+|.++|.++|+++++.|++ ++++|++++++|+|||+.++...|+..+++.+++++.++.+..+...+ ...+...++.+
T Consensus 88 ~~~~~R~~~L~~~a~~l~~~~~~ela~~~~~e~Gk~~~~a~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 167 (522)
T cd07123 88 MPFEDRAAIFLKAADLLSGKYRYELNAATMLGQGKNVWQAEIDAACELIDFLRFNVKYAEELYAQQPLSSPAGVWNRLEY 167 (522)
T ss_pred CCHHHHHHHHHHHHHHHHhhCHHHHHHHHHHhcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEE
Confidence 5889999999999999996 899999999999999998886568899999999999887776554332 22245578899
Q ss_pred ccc-eeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcc
Q 014515 79 EPI-GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH 157 (423)
Q Consensus 79 ~P~-Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~ 157 (423)
+|+ |||++|+|||||+....+++++|| +||+||+|||+.+|.++..+.+++.++|+|+|++|+++|++.+.++.|+.|
T Consensus 168 ~P~~GVv~~I~PwNfP~~~~~~~~~pal-aGN~VVlKPs~~tp~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~ 246 (522)
T cd07123 168 RPLEGFVYAVSPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAVLSNYLVYKILEEAGLPPGVINFVPGDGPVVGDTVLAS 246 (522)
T ss_pred ecCCceEEEECCcccHHHHHHHHHHHHH-hCCEEEEECCCCCCHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcC
Confidence 998 999999999999999999999999 699999999999999999999999999999999999999777789999999
Q ss_pred cCcceEeeecCchHHHHHHHHHhhCCCC------ceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEE
Q 014515 158 MEVDKLAFTGSTTTGKIVLQLAAKSNLK------PVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTF 231 (423)
Q Consensus 158 ~~v~~v~~tGs~~~~~~v~~~~a~~~~~------~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~ 231 (423)
|+++.|+||||+++|+.|++.++. +++ ++++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||
T Consensus 247 ~~v~~V~FTGS~~~G~~i~~~aa~-~l~~~~~~~~v~lElGGkn~~IV~~dAdl~~Aa~~i~~~~f~~aGQ~C~a~~rv~ 325 (522)
T cd07123 247 PHLAGLHFTGSTPTFKSLWKQIGE-NLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAASRAY 325 (522)
T ss_pred CCcCEEEEECCHHHHHHHHHHHHh-hcccccccCCEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEE
Confidence 999999999999999999999887 565 8999999999999999999999999999999999999999999999
Q ss_pred EeCccHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhC-CCEEEeCCcccCCCCceeecEEEec
Q 014515 232 VHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG-GAKLETGGERLGAKGYYIKPTVFTG 310 (423)
Q Consensus 232 V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~-ga~~~~gg~~~~~~g~~~~Ptvl~~ 310 (423)
||+++||+|+++|+++++++++|+|.|+++++||+++..+++++.+++++++++ |+++++||......|+|++|||+.+
T Consensus 326 V~~~i~d~f~~~l~~~~~~l~~G~p~d~~t~~Gpli~~~~~~~v~~~v~~a~~~~Ga~vl~gg~~~~~~g~f~~PTvl~~ 405 (522)
T cd07123 326 VPESLWPEVKERLLEELKEIKMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDDSVGYFVEPTVIET 405 (522)
T ss_pred EcHHHHHHHHHHHHHHHhhCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEeCCCcCCCCCceEcCEEEeC
Confidence 999999999999999999999999999999999999999999999999999999 9999999976444689999999999
Q ss_pred CCCcccccccccccCeeEEEecCC--HHHHHHHHhcCC-CCceEEEecCCHHHHHHHHHhc--ceeEEEEcCcCCC--CC
Q 014515 311 VKDDMLIAKDEIFGPVQSILKYKD--LDEVIQRSNASQ-YGLAAGVFTHNLDTANTLMRAL--RVGSVWINCFDVF--DA 383 (423)
Q Consensus 311 ~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~n~~~-~gl~~~v~s~d~~~~~~~~~~l--~~g~v~iN~~~~~--~~ 383 (423)
++++|++++||+||||++|++|+| +||+|+++|++. |||++||||+|.+++.++++++ ++|.|+||+.+.. .+
T Consensus 406 v~~~~~i~~eEiFGPVl~V~~~~~~~~~eai~~aN~~~~~gL~a~Vft~d~~~~~~~~~~l~~~~G~v~iN~~~~~~~~~ 485 (522)
T cd07123 406 TDPKHKLMTEEIFGPVLTVYVYPDSDFEETLELVDTTSPYALTGAIFAQDRKAIREATDALRNAAGNFYINDKPTGAVVG 485 (522)
T ss_pred CCCCChhhhcCCCCCeEEEEEeCCCCHHHHHHHHhCCCCcCceEEEEeCCHHHHHHHHHhhhhcCcEEEECCCCCCCCCC
Confidence 999999999999999999999984 799999999985 9999999999999999999997 5999999986543 35
Q ss_pred CCCCCCCCCCCCC-CcchHHHHHhhheeeEEEEe
Q 014515 384 AIPFGGYKQSGQG-REKGSYSLSNYLQVKAVVTA 416 (423)
Q Consensus 384 ~~pfgG~~~SG~g-~~~g~~~l~~~~~~k~v~~~ 416 (423)
.+||||+|.||+| +++|.+++++|++.|++++.
T Consensus 486 ~~PfGG~k~SG~gg~~~g~~~l~~~~~~k~~~~~ 519 (522)
T cd07123 486 QQPFGGARASGTNDKAGSPLNLLRWVSPRTIKET 519 (522)
T ss_pred CCCCCcchhcCCCcccCCHHHHHHhcceEEEEEe
Confidence 7899999999996 99999999999999998764
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. |
| >TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-87 Score=684.05 Aligned_cols=415 Identities=34% Similarity=0.532 Sum_probs=387.4
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCC-CCCCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP-ADGPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|++++++|++++++|+|||+.++.. |+..+++.+++++..+++..+...+ ...+...+.+++
T Consensus 88 ~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (511)
T TIGR01237 88 TPVRERAGILRKAAAIMERRRHELNALICLEVGKIIPEADA-EVAEAIDFCEYYAREMERLAGQGVNLDIEGETNRYFYQ 166 (511)
T ss_pred CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEe
Confidence 57899999999999999999999999999999999999875 9999999999999888776554322 223456788899
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccC
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 159 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~ 159 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++++.+.++.|+.||+
T Consensus 167 P~GVV~~I~P~N~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~ 246 (511)
T TIGR01237 167 PRGVAVVISPWNFPMAIAVGMTVAPIVTGNCVVLKPAETSTVIAAKIVEILIEAGLPPGVFQFVPGKGSEVGSYLVNHPK 246 (511)
T ss_pred cceeEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEccCCCchhHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999977788999999999
Q ss_pred cceEeeecCchHHHHHHHHHhh-----CCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeC
Q 014515 160 VDKLAFTGSTTTGKIVLQLAAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHE 234 (423)
Q Consensus 160 v~~v~~tGs~~~~~~v~~~~a~-----~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~ 234 (423)
++.|.||||+.+|+.|++.++. .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+
T Consensus 247 v~~V~fTGs~~~G~~i~~~aa~~~~~~~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~ 326 (511)
T TIGR01237 247 THLITFTGSREVGCRIYEDAAKVQPGQKHLKRVIAEMGGKDAIIVDESADIEQAVAGAVYSAFGFTGQKCSACSRVVVLS 326 (511)
T ss_pred CCeEEEECchHHHHHHHHHHhcccccccccceeEeccCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCcccceEEEEeh
Confidence 9999999999999999998873 26899999999999999999999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCc
Q 014515 235 SVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDD 314 (423)
Q Consensus 235 ~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~ 314 (423)
+++|+|+++|+++++++++|+|.++++++||++++.+++++.+++++++++| ++++||......|+|++|||+.+++++
T Consensus 327 ~i~d~f~~~L~~~~~~l~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~g-~~l~gg~~~~~~g~~~~Ptvl~~~~~~ 405 (511)
T TIGR01237 327 PVYDAVVERFVEATRSLNVGPTDDPSTQVGPVIDQKSQAKIQEYIEQGKAEG-ELAIGGCDAPSEGYFIGPTIFKDVDRH 405 (511)
T ss_pred hHHHHHHHHHHHHHHhCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCC-cEEECCccCCCCCeEEcCEEEeCCCCC
Confidence 9999999999999999999999999999999999999999999999999888 788888754446899999999999999
Q ss_pred ccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC--CCCCCCCCCCC
Q 014515 315 MLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF--DAAIPFGGYKQ 392 (423)
Q Consensus 315 ~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~--~~~~pfgG~~~ 392 (423)
|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+.+.. .+.+||||+|.
T Consensus 406 ~~i~~eE~FgPVl~v~~~~~~deai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~ 485 (511)
T TIGR01237 406 ARLAQEEIFGPVVAIIRAADFDEALEIANGTEYGLTGGVYSNTRDHIERAAAEFEVGNLYFNRTITGAIVGRQPFGGFKM 485 (511)
T ss_pred ChHhhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccc
Confidence 9999999999999999999999999999999999999999999999999999999999999987543 35689999999
Q ss_pred CCCCC-cchHHHHHhhheeeEEEEec
Q 014515 393 SGQGR-EKGSYSLSNYLQVKAVVTAL 417 (423)
Q Consensus 393 SG~g~-~~g~~~l~~~~~~k~v~~~~ 417 (423)
||+|+ ++|.+++++||+.|+++.++
T Consensus 486 SG~G~~~~g~~~l~~~~~~k~v~~~~ 511 (511)
T TIGR01237 486 SGTDSKAGGPDYLLQFMQPKTVTENI 511 (511)
T ss_pred ccCCCcCCCHHHHHHhcceEEEEEeC
Confidence 99995 78999999999999998763
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs. |
| >TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-87 Score=684.70 Aligned_cols=416 Identities=30% Similarity=0.444 Sum_probs=385.4
Q ss_pred CCHHHHHHHHHHHHHHHH-HcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccC-CCCCCCceeEee
Q 014515 1 MTAYERSKIILRFADLLE-RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA-PADGPYHVQTLH 78 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~-~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 78 (423)
+|..+|+++|+++++.|+ +++++|++++++|+|||+.++...++..+++.+++++.+++...+... ....+..++..+
T Consensus 88 ~~~~~R~~~L~k~a~~l~~~~~~~la~~~~~e~GK~~~~a~~e~v~~~i~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~ 167 (533)
T TIGR01236 88 LPFYDRAAIFLKAADLLSGPYREEILAATMLGQSKNVYQAEIDAVAELIDFFRFNVKYARELYEQQPSESAPGEWNRTDY 167 (533)
T ss_pred CCHHHHHHHHHHHHHHHHhhcHHHHHHHHHHHcCCcHHHHhHhHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEE
Confidence 578999999999999999 599999999999999999998764599999999999988877655433 222345678899
Q ss_pred ccc-eeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcc
Q 014515 79 EPI-GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH 157 (423)
Q Consensus 79 ~P~-Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~ 157 (423)
+|+ |||++|+|||||+....+++++|| +||+||+|||+.+|.++..+.+++.++|+|+|++|+++|++.+.++.|+.|
T Consensus 168 ~P~~GVv~~I~PwN~P~~~~~~~~a~AL-aGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~g~~Lv~~ 246 (533)
T TIGR01236 168 RPLEGFVYAISPFNFTAIAGNLPGAPAL-MGNTVIWKPSITATLSNYLTMRILEEAGLPPGVINFVPGDGFAVSDVVLAD 246 (533)
T ss_pred ecCCCEEEEEeCCchHHHHHHHHHHHHH-hCCeEEEECCCcCCHHHHHHHHHHHhcCCCCCcEEEEecCcHHHHHHHhcC
Confidence 999 999999999999999999999999 899999999999999999999999999999999999999777889999999
Q ss_pred cCcceEeeecCchHHHHHHHHHhhCCCC------ceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEE
Q 014515 158 MEVDKLAFTGSTTTGKIVLQLAAKSNLK------PVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTF 231 (423)
Q Consensus 158 ~~v~~v~~tGs~~~~~~v~~~~a~~~~~------~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~ 231 (423)
|+++.|+||||+++|+.|++.+++ +++ ++++|+|||||+||++|+|++.|++.+++++|.|+||.|+++++||
T Consensus 247 p~v~~V~FTGS~~~G~~i~~~aa~-~l~~~~~~~~v~lElGGknp~IV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~ 325 (533)
T TIGR01236 247 PRLAGIHFTGSTATFKHLWKWVAS-NLDRYHNFPRIVGETGGKDFHVVHPSADIDHAVTATIRGAFEYQGQKCSAASRLY 325 (533)
T ss_pred CCcCEEEEECCHHHHHHHHHHHHh-hccccccCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCCCcCCeeEE
Confidence 999999999999999999999887 565 4999999999999999999999999999999999999999999999
Q ss_pred EeCccHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCC--CEEEeCCcccCCCCceeecEEEe
Q 014515 232 VHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG--AKLETGGERLGAKGYYIKPTVFT 309 (423)
Q Consensus 232 V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~g--a~~~~gg~~~~~~g~~~~Ptvl~ 309 (423)
||++++|+|+++|+++++++++|+|.|+++++||+++..+++++.+++++++++| +++++||......|+|++|||+.
T Consensus 326 V~~~i~d~f~~~l~~~~~~l~~G~p~d~~t~~Gpli~~~~~~~v~~~i~~a~~~Ga~a~vl~GG~~~~~~G~~~~PTvl~ 405 (533)
T TIGR01236 326 VPHSVWPRFKDELLAELAEVKVGDPDDFSNFMGAVIDERSFVKNVKYIERAKGDPAELTILYGGKYDDSEGYFVEPTVIL 405 (533)
T ss_pred EchhHHHHHHHHHHHHHhcCCcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhcCCceEEEeCCCcCCCCCeEEeeEEEe
Confidence 9999999999999999999999999999999999999999999999999999987 79999997644468999999999
Q ss_pred cCCCcccccccccccCeeEEEecCC--HHHHHHHH-hcCCCCceEEEecCCHHHHHHHHHhcc--eeEEEEcCcCCC--C
Q 014515 310 GVKDDMLIAKDEIFGPVQSILKYKD--LDEVIQRS-NASQYGLAAGVFTHNLDTANTLMRALR--VGSVWINCFDVF--D 382 (423)
Q Consensus 310 ~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~-n~~~~gl~~~v~s~d~~~~~~~~~~l~--~g~v~iN~~~~~--~ 382 (423)
+++++|++++||+||||++|++|+| ++||++++ |+++|||++||||+|.+++.+++++++ +|.|+||+.+.. .
T Consensus 406 ~~~~d~~i~~eE~FGPVl~v~~~~~~~~~eai~~~~n~~~~gL~a~Vft~d~~~a~~~~~~l~~~~G~v~IN~~~~~~~~ 485 (533)
T TIGR01236 406 SKDPTDPLMVEEIFGPVLTVYVYPDDKYKEILDVVDSTSRYGLTGAVFAKDRQAILEADKRLRFAAGNFYINDKPTGAVV 485 (533)
T ss_pred cCCCCChhhcccCCCCeEEEEEeCCCCHHHHHHHHhcCCCcCceEEEEeCCHHHHHHHHHHhhhcCcEEEECCCCCCCCC
Confidence 9999999999999999999999998 59999999 889999999999999999999999977 999999976543 3
Q ss_pred CCCCCCCCCCCCCC-CcchHHHHHhhheeeEEEEecC
Q 014515 383 AAIPFGGYKQSGQG-REKGSYSLSNYLQVKAVVTALK 418 (423)
Q Consensus 383 ~~~pfgG~~~SG~g-~~~g~~~l~~~~~~k~v~~~~~ 418 (423)
+.+||||+|.||+| +++|.+++++|++.|+++...-
T Consensus 486 ~~~PfGG~k~SG~G~~~~g~~~l~~f~~~k~v~~~~~ 522 (533)
T TIGR01236 486 GQQPFGGARGSGTNDKAGGPLNLLRWTSARSIKETFV 522 (533)
T ss_pred CCCCCCCcccccCCcccCCHHHHHHhcceEEEEEEcc
Confidence 67899999999998 9999999999999999877753
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate. |
| >cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-87 Score=677.84 Aligned_cols=410 Identities=40% Similarity=0.660 Sum_probs=388.3
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCC-CCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||+.++.. |+..+++.+++++.+.++..+...+.. .+...+.+++
T Consensus 40 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (451)
T cd07150 40 TTPSERERILLKAAEIMERRADDLIDLLIDEGGSTYGKAWF-ETTFTPELLRAAAGECRRVRGETLPSDSPGTVSMSVRR 118 (451)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEe
Confidence 57899999999999999999999999999999999998875 999999999999988877665544433 3556789999
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccC
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 159 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~ 159 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++.+.+..|..|++
T Consensus 119 P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~t~~~l~~~~~~ag~P~g~v~~v~g~~~~~~~~l~~~~~ 198 (451)
T cd07150 119 PLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPVIGLKIAEIMEEAGLPKGVFNVVTGGGAEVGDELVDDPR 198 (451)
T ss_pred cccEEEEECCCccHHHHHHHHHHHHHhcCCeEEEECCccCcHHHHHHHHHHHHhCCCcCcEEEeeCCCcHHHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999877788999999999
Q ss_pred cceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHH
Q 014515 160 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239 (423)
Q Consensus 160 v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~ 239 (423)
+|.|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++|.++||.|+++++||||++++|+
T Consensus 199 v~~V~ftGs~~~g~~i~~~aa~-~~~~~~lelGG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~ 277 (451)
T cd07150 199 VRMVTFTGSTAVGREIAEKAGR-HLKKITLELGGKNPLIVLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDE 277 (451)
T ss_pred CCEEEEECcHHHHHHHHHHHhh-cCCceEeecCCCCeeEECCCCChHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHH
Confidence 9999999999999999999887 789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCcccccc
Q 014515 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAK 319 (423)
Q Consensus 240 f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~ 319 (423)
|+++|+++++++++|+|.++++++||+++..+++++.+++++++.+|+++++||.. .|+|++|||+.++++++.+++
T Consensus 278 f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~ 354 (451)
T cd07150 278 FVKKFVARASKLKVGDPRDPDTVIGPLISPRQVERIKRQVEDAVAKGAKLLTGGKY---DGNFYQPTVLTDVTPDMRIFR 354 (451)
T ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCcc---CCcEEcCEEEeCCCCCCHHHh
Confidence 99999999999999999999999999999999999999999999999999999864 488999999999999999999
Q ss_pred cccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCC-CCCCCCCCCCCCCCCc
Q 014515 320 DEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFD-AAIPFGGYKQSGQGRE 398 (423)
Q Consensus 320 ~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~-~~~pfgG~~~SG~g~~ 398 (423)
+|+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||+.+... +.+||||+|.||+|++
T Consensus 355 ~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~~~SG~G~~ 434 (451)
T cd07150 355 EETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDLQRAFKLAERLESGMVHINDPTILDEAHVPFGGVKASGFGRE 434 (451)
T ss_pred CCCcCceEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCCcCCccccccCcC
Confidence 999999999999999999999999999999999999999999999999999999999876543 6789999999999999
Q ss_pred chHHHHHhhheeeEEEE
Q 014515 399 KGSYSLSNYLQVKAVVT 415 (423)
Q Consensus 399 ~g~~~l~~~~~~k~v~~ 415 (423)
+|.+|+++||+.|++++
T Consensus 435 ~g~~~l~~~~~~k~v~~ 451 (451)
T cd07150 435 GGEWSMEEFTELKWITV 451 (451)
T ss_pred CcHHHHHHhheeeEEeC
Confidence 99999999999998853
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. |
| >cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-87 Score=679.80 Aligned_cols=411 Identities=42% Similarity=0.687 Sum_probs=386.1
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCcc-CCCCCCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT-APADGPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++...|+..+++.+++++...+...... .+...+...+..++
T Consensus 57 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (471)
T cd07139 57 LSPAERAAVLRRLADALEARADELARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFEERRPGSGGGHVLVRRE 136 (471)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCceEEEEEE
Confidence 47899999999999999999999999999999999977765699999999999998876654322 22223455688999
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccC
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 159 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~ 159 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++ +.+.+..|+.|++
T Consensus 137 P~Gvv~~I~p~N~P~~~~~~~i~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g-~~~~~~~l~~~~~ 215 (471)
T cd07139 137 PVGVVAAIVPWNAPLFLAALKIAPALAAGCTVVLKPSPETPLDAYLLAEAAEEAGLPPGVVNVVPA-DREVGEYLVRHPG 215 (471)
T ss_pred eccEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcCCHHHHHHHHHHHHcCCCCCcEEEEeC-CHHHHHHHhcCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999998 5668899999999
Q ss_pred cceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHH
Q 014515 160 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239 (423)
Q Consensus 160 v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~ 239 (423)
++.|+||||+.+|+.|++.+++ +++|+++|+||+||+||++|||++.|++.+++++|.++||.|+++++||||++++|+
T Consensus 216 i~~v~ftGs~~~g~~v~~~~~~-~~~~~~lElGG~np~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~ 294 (471)
T cd07139 216 VDKVSFTGSTAAGRRIAAVCGE-RLARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDE 294 (471)
T ss_pred CCEEEEECcHHHHHHHHHHHHh-cCCEEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHhHHHH
Confidence 9999999999999999999887 789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC--CCCceeecEEEecCCCcccc
Q 014515 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLI 317 (423)
Q Consensus 240 f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~ 317 (423)
|+++|+++++++++|+|.++++++||++++.+++++.+++++++.+|+++++||.... ..|+|++|||+.++++++++
T Consensus 295 f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~~ 374 (471)
T cd07139 295 VVEALAAAVAALKVGDPLDPATQIGPLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDRGWFVEPTLFADVDNDMRI 374 (471)
T ss_pred HHHHHHHHHHhCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEEecCCCcchH
Confidence 9999999999999999999999999999999999999999999999999999997543 35889999999999999999
Q ss_pred cccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCCC
Q 014515 318 AKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGR 397 (423)
Q Consensus 318 ~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~ 397 (423)
++||+||||++|++|+|+|||++++|+++|||+++|||+|.+++.++++++++|.|+||+.+ ..+.+||||+|.||+|+
T Consensus 375 ~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~-~~~~~PfgG~k~SG~G~ 453 (471)
T cd07139 375 AQEEIFGPVLSVIPYDDEDDAVRIANDSDYGLSGSVWTADVERGLAVARRIRTGTVGVNGFR-LDFGAPFGGFKQSGIGR 453 (471)
T ss_pred HhCccCCCeEEEeecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCC-CCCCCCCCCcccccCCc
Confidence 99999999999999999999999999999999999999999999999999999999999865 56789999999999999
Q ss_pred cchHHHHHhhheeeEEE
Q 014515 398 EKGSYSLSNYLQVKAVV 414 (423)
Q Consensus 398 ~~g~~~l~~~~~~k~v~ 414 (423)
++|.+|+++||+.|+++
T Consensus 454 ~~g~~~~~~ft~~k~i~ 470 (471)
T cd07139 454 EGGPEGLDAYLETKSIY 470 (471)
T ss_pred cchHHHHHHHhceeEEe
Confidence 99999999999999985
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. |
| >cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-86 Score=679.25 Aligned_cols=415 Identities=42% Similarity=0.710 Sum_probs=389.3
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCC-CCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||+.++.. |+..+++.+++++...+...+...+.. .+...+.+++
T Consensus 56 ~~~~~R~~~l~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~-ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (478)
T cd07131 56 VPAPRRAEYLFRAAELLKKRKEELARLVTREMGKPLAEGRG-DVQEAIDMAQYAAGEGRRLFGETVPSELPNKDAMTRRQ 134 (478)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhCCcccccCCCCceEEEEee
Confidence 57899999999999999999999999999999999999875 999999999999888776655433321 2335689999
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccC
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 159 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~ 159 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++.+.+..|+.||+
T Consensus 135 P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~ 214 (478)
T cd07131 135 PIGVVALITPWNFPVAIPSWKIFPALVCGNTVVFKPAEDTPACALKLVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPD 214 (478)
T ss_pred ceeEEEEECCcCcHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHhcCcCCCcEEEEecCchHHHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999877778999999999
Q ss_pred cceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHH
Q 014515 160 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239 (423)
Q Consensus 160 v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~ 239 (423)
+|.|+||||+.+|+.|.+.+++ +++|+++|+||+||+||++|||++.|++.+++++|.|+||.|+++++||||++++++
T Consensus 215 vd~V~ftGs~~~g~~i~~~aa~-~~~~~~lelgG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~ 293 (478)
T cd07131 215 VDVVSFTGSTEVGERIGETCAR-PNKRVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDE 293 (478)
T ss_pred CCEEEEECcHHHHHHHHHHHhh-cCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhhHHH
Confidence 9999999999999999999887 789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC----CCCceeecEEEecCCCcc
Q 014515 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDM 315 (423)
Q Consensus 240 f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~ 315 (423)
|+++|++++.++++|+|.++++++||++++.+++++.+++++++++|+++++||...+ ..|+|++|||+.++++++
T Consensus 294 f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~ 373 (478)
T cd07131 294 FLKRFVERAKRLRVGDGLDEETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDM 373 (478)
T ss_pred HHHHHHHHHHhcCCCCCCCCCCcCCcCCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEeCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999997542 358899999999999999
Q ss_pred cccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC-CCCCCCCCCCCCCC
Q 014515 316 LIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV-FDAAIPFGGYKQSG 394 (423)
Q Consensus 316 ~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~pfgG~~~SG 394 (423)
+++++|+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+... ..+.+||||+|.||
T Consensus 374 ~~~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~k~SG 453 (478)
T cd07131 374 RIAQEEIFGPVVALIEVSSLEEAIEIANDTEYGLSSAIYTEDVNKAFRARRDLEAGITYVNAPTIGAEVHLPFGGVKKSG 453 (478)
T ss_pred hHhhCCCcCCeEEEEEeCCHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999998755 35789999999999
Q ss_pred CC-CcchHHHHHhhheeeEEEEec
Q 014515 395 QG-REKGSYSLSNYLQVKAVVTAL 417 (423)
Q Consensus 395 ~g-~~~g~~~l~~~~~~k~v~~~~ 417 (423)
+| +++|.+|+++||+.|+|++++
T Consensus 454 ~G~~~~g~~~~~~f~~~k~i~~~~ 477 (478)
T cd07131 454 NGHREAGTTALDAFTEWKAVYVDY 477 (478)
T ss_pred CCCcCCcHHHHHHhhheEEEEEeC
Confidence 99 888999999999999998763
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. |
| >cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-87 Score=678.01 Aligned_cols=408 Identities=43% Similarity=0.682 Sum_probs=384.5
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++...|+..+++.+++++...+....... ....+.+++|
T Consensus 55 ~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~P 130 (466)
T cd07138 55 TSVEERAALLERIAEAYEARADELAQAITLEMGAPITLARAAQVGLGIGHLRAAADALKDFEFEER----RGNSLVVREP 130 (466)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccccc----CceEEEEEee
Confidence 578999999999999999999999999999999999888656899999999999987766544321 2345778999
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 160 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v 160 (423)
+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++.+.++.|+.||++
T Consensus 131 ~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v 210 (466)
T cd07138 131 IGVCGLITPWNWPLNQIVLKVAPALAAGCTVVLKPSEVAPLSAIILAEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDV 210 (466)
T ss_pred cceEEEECCCccHHHHHHHHHHHHHhcCCEEEEECCCcCcHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHhcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999998777789999999999
Q ss_pred ceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHHH
Q 014515 161 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240 (423)
Q Consensus 161 ~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~f 240 (423)
+.|+||||+.+|+.|.+.++. +++|+++|+|||||+||++|||++.|++.+++++|.++||.|+++++||||++++|+|
T Consensus 211 ~~v~fTGs~~~g~~i~~~aa~-~~~~v~lElgG~~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f 289 (466)
T cd07138 211 DMVSFTGSTRAGKRVAEAAAD-TVKRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEA 289 (466)
T ss_pred CEEEEECcHHHHHHHHHHHhc-cCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHhHHHHH
Confidence 999999999999999999887 7899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC---CCCceeecEEEecCCCcccc
Q 014515 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG---AKGYYIKPTVFTGVKDDMLI 317 (423)
Q Consensus 241 ~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~---~~g~~~~Ptvl~~~~~~~~~ 317 (423)
+++|+++++++++|+|.++++++||++++.+++++.+++++++++|+++++||.... ..|+|++|||+.++++++++
T Consensus 290 ~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~v~~a~~~Ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i 369 (466)
T cd07138 290 EEIAAAAAEAYVVGDPRDPATTLGPLASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGLERGYFVKPTVFADVTPDMTI 369 (466)
T ss_pred HHHHHHHHHhcCCCCCCCCCCcCCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCcCCCCceECCEEecCCCCCChH
Confidence 999999999999999999999999999999999999999999999999999996322 35899999999999999999
Q ss_pred cccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCCC
Q 014515 318 AKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGR 397 (423)
Q Consensus 318 ~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~ 397 (423)
++||+||||++|++|+|.|||++++|+++|||+++|||+|.++++++++++++|+|+||+.. ..+.+||||+|.||+|+
T Consensus 370 ~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~i~t~d~~~a~~~~~~l~~G~v~iN~~~-~~~~~PfgG~k~SG~G~ 448 (466)
T cd07138 370 AREEIFGPVLSIIPYDDEDEAIAIANDTPYGLAGYVWSADPERARAVARRLRAGQVHINGAA-FNPGAPFGGYKQSGNGR 448 (466)
T ss_pred HhCCCCCceEEEeccCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCC-CCCCCCcCCcccccCCc
Confidence 99999999999999999999999999999999999999999999999999999999999853 56789999999999999
Q ss_pred cchHHHHHhhheeeEEE
Q 014515 398 EKGSYSLSNYLQVKAVV 414 (423)
Q Consensus 398 ~~g~~~l~~~~~~k~v~ 414 (423)
++|.+++++|++.|+++
T Consensus 449 ~~g~~~~~~~~~~k~v~ 465 (466)
T cd07138 449 EWGRYGLEEFLEVKSIQ 465 (466)
T ss_pred cchHHHHHHhcceeEEe
Confidence 99999999999999874
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. |
| >cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-86 Score=675.26 Aligned_cols=411 Identities=35% Similarity=0.549 Sum_probs=387.7
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCcc-CCCCCCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT-APADGPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++.. |+..+++.+++++..+++..... .+...+...+.+++
T Consensus 37 ~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (452)
T cd07102 37 VPLEERKAIVTRAVELLAANTDEIAEELTWQMGRPIAQAGG-EIRGMLERARYMISIAEEALADIRVPEKDGFERYIRRE 115 (452)
T ss_pred CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcccCCCCCeeEEEEEE
Confidence 57899999999999999999999999999999999999864 99999999999998877654432 23334556788999
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccC
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 159 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~ 159 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..|.+++.++|+|+|++|++++++ +.+..|+.||+
T Consensus 116 P~GVv~~i~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~-~~~~~L~~~~~ 194 (452)
T cd07102 116 PLGVVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPLCGERFAAAFAEAGLPEGVFQVLHLSH-ETSAALIADPR 194 (452)
T ss_pred eccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHhcCCCcCcEEEEeCCc-hhHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999966 78899999999
Q ss_pred cceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHH
Q 014515 160 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239 (423)
Q Consensus 160 v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~ 239 (423)
++.|+||||+.+|+.|++.+++ .++|+.+|+|||||+||++|||++.|++.+++++|+++||.|+++++||||++++|+
T Consensus 195 v~~V~fTGs~~~g~~v~~~a~~-~~~~v~lelgG~~~~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~ 273 (452)
T cd07102 195 IDHVSFTGSVAGGRAIQRAAAG-RFIKVGLELGGKDPAYVRPDADLDAAAESLVDGAFFNSGQSCCSIERIYVHESIYDA 273 (452)
T ss_pred CCEEEEECcHHHHHHHHHHHHh-cCCcEEEECCCCCceEEcCCCCHHHHHHHHHHHHHHhCCCCCcCCcEEEEeHHHHHH
Confidence 9999999999999999998886 789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccc---CCCCceeecEEEecCCCccc
Q 014515 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL---GAKGYYIKPTVFTGVKDDML 316 (423)
Q Consensus 240 f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~---~~~g~~~~Ptvl~~~~~~~~ 316 (423)
|+++|++++.++++|+|.++++++||+++..+++++++++++++++|+++++||... +..|+|++|||+.+++++|+
T Consensus 274 f~~~L~~~~~~l~vg~p~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~vl~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~ 353 (452)
T cd07102 274 FVEAFVAVVKGYKLGDPLDPSTTLGPVVSARAADFVRAQIADAIAKGARALIDGALFPEDKAGGAYLAPTVLTNVDHSMR 353 (452)
T ss_pred HHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCCCceEcCEEEecCCCCCh
Confidence 999999999999999999999999999999999999999999999999999999753 24689999999999999999
Q ss_pred ccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCC
Q 014515 317 IAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQG 396 (423)
Q Consensus 317 ~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g 396 (423)
++++|+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||++....+..||||+|+||+|
T Consensus 354 i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfgG~k~SG~G 433 (452)
T cd07102 354 VMREETFGPVVGIMKVKSDAEAIALMNDSEYGLTASVWTKDIARAEALGEQLETGTVFMNRCDYLDPALAWTGVKDSGRG 433 (452)
T ss_pred hhhcCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHHcCcceEEECCCCCCCCCCCCCCccccccC
Confidence 99999999999999999999999999999999999999999999999999999999999987766778999999999999
Q ss_pred CcchHHHHHhhheeeEEE
Q 014515 397 REKGSYSLSNYLQVKAVV 414 (423)
Q Consensus 397 ~~~g~~~l~~~~~~k~v~ 414 (423)
+++|.+++++||+.|+++
T Consensus 434 ~~~g~~~~~~~~~~k~~~ 451 (452)
T cd07102 434 VTLSRLGYDQLTRPKSYH 451 (452)
T ss_pred ccchHHHHHHHhceeEEe
Confidence 999999999999999885
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. |
| >cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-86 Score=675.39 Aligned_cols=407 Identities=40% Similarity=0.653 Sum_probs=384.6
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCC-----CCCcee
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-----GPYHVQ 75 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~ 75 (423)
+|..+|.++|+++++.|+++.++|++++++|+|||..++.. |+..+++.+++++...++..++..+.. .+...+
T Consensus 40 ~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (453)
T cd07094 40 LPPHERMAILERAADLLKKRAEEFAKIIACEGGKPIKDARV-EVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAW 118 (453)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccccccCCCceEE
Confidence 47899999999999999999999999999999999999875 999999999999988777665443322 244567
Q ss_pred EeeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhh
Q 014515 76 TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 155 (423)
Q Consensus 76 ~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~ 155 (423)
..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++++++|++.++++.|.
T Consensus 119 ~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VI~Kps~~~p~~~~~l~~~l~~ag~P~g~~~~v~g~~~~~~~~l~ 198 (453)
T cd07094 119 TIREPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPASKTPLSALELAKILVEAGVPEGVLQVVTGEREVLGDAFA 198 (453)
T ss_pred EEEeccceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcCcEEEEeCCCchHHHHHh
Confidence 88999999999999999999999999999999999999999999999999999999999999999999997777899999
Q ss_pred cccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCc
Q 014515 156 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES 235 (423)
Q Consensus 156 ~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~ 235 (423)
.||++|.|+||||+++|+.|++.+ .++|+++|+|||||+||++|+|++.|++.+++++|.++||.|+++++||||++
T Consensus 199 ~~~~v~~V~fTGs~~~g~~v~~~a---~~~~~~lelGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~i~V~~~ 275 (453)
T cd07094 199 ADERVAMLSFTGSAAVGEALRANA---GGKRIALELGGNAPVIVDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEE 275 (453)
T ss_pred cCCCCCEEEEECcHHHHHHHHHHc---CCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCcCCeEEEEeHH
Confidence 999999999999999999999976 46899999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCcc
Q 014515 236 VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDM 315 (423)
Q Consensus 236 ~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~ 315 (423)
++|+|+++|+++++++++|+|.++++++||+++..+++++.+++++++++|+++++||.. .|+|++|||+.++++++
T Consensus 276 i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~---~g~~~~Ptvl~~~~~~~ 352 (453)
T cd07094 276 LYDEFIEAFVAAVKKLKVGDPLDEDTDVGPLISEEAAERVERWVEEAVEAGARLLCGGER---DGALFKPTVLEDVPRDT 352 (453)
T ss_pred HHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCccC---CCeEEeCEEEeCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999864 47899999999999999
Q ss_pred cccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC-CCCCCCCCCCCCC
Q 014515 316 LIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSG 394 (423)
Q Consensus 316 ~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~pfgG~~~SG 394 (423)
+++++|+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||++... .+.+||||+|+||
T Consensus 353 ~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG 432 (453)
T cd07094 353 KLSTEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIFTRDLNVAFKAAEKLEVGGVMVNDSSAFRTDWMPFGGVKESG 432 (453)
T ss_pred hhhhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeeEEECCCHHHHHHHHHhcCcCeEEEcCCCCCCCCCCCCCCccccc
Confidence 999999999999999999999999999999999999999999999999999999999999987554 4789999999999
Q ss_pred CCCcchHHHHHhhheeeEEE
Q 014515 395 QGREKGSYSLSNYLQVKAVV 414 (423)
Q Consensus 395 ~g~~~g~~~l~~~~~~k~v~ 414 (423)
+|+++|.+|+++|++.|+|+
T Consensus 433 ~G~~~g~~~~~~~~~~k~i~ 452 (453)
T cd07094 433 VGREGVPYAMEEMTEEKTVV 452 (453)
T ss_pred cCcCChHHHHHHHhceeEEe
Confidence 99999999999999999985
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. |
| >PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-86 Score=676.64 Aligned_cols=415 Identities=30% Similarity=0.440 Sum_probs=382.0
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++.. |+..+++.+++++.+.....+...+...+...+.+++|
T Consensus 56 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 134 (487)
T PRK09457 56 LSFEERQAIVERFAALLEENKEELAEVIARETGKPLWEAAT-EVTAMINKIAISIQAYHERTGEKRSEMADGAAVLRHRP 134 (487)
T ss_pred CCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCceeccCCCceeEEEEec
Confidence 57899999999999999999999999999999999999875 99999999999887765554433222234456889999
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 160 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v 160 (423)
+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++ +.+.+..|+.||++
T Consensus 135 ~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKPs~~tp~t~~~l~~l~~~aGlP~gvv~~v~g-~~~~~~~L~~~~~v 213 (487)
T PRK09457 135 HGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAELTVKLWQQAGLPAGVLNLVQG-GRETGKALAAHPDI 213 (487)
T ss_pred cEEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHhcCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999998 56789999999999
Q ss_pred ceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccH-HH
Q 014515 161 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY-DQ 239 (423)
Q Consensus 161 ~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~-~~ 239 (423)
|.|+||||+++|+.|++.++.+..+++++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++ |+
T Consensus 214 ~~V~fTGS~~~G~~i~~~aa~~~~~~~~lElGGk~p~IV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~d~ 293 (487)
T PRK09457 214 DGLLFTGSANTGYLLHRQFAGQPEKILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDA 293 (487)
T ss_pred CEEEEECCHHHHHHHHHHHhhcCCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHhhccCCCCCCCceEEEeccccHHH
Confidence 99999999999999999877645678999999999999999999999999999999999999999999999999998 99
Q ss_pred HHHHHHHHHhhcccCCCC-CCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCccccc
Q 014515 240 FVEKANALAMKRVVGDPF-KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIA 318 (423)
Q Consensus 240 f~~~l~~~~~~~~~g~p~-~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~ 318 (423)
|+++|+++++++++|+|. ++++++||+++..+++++.+++++++++|+++++||...+..|.|++|||+ +++++++++
T Consensus 294 f~~~l~~~~~~~~vG~p~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl-~v~~~~~i~ 372 (487)
T PRK09457 294 FLARLVAVAKRLTVGRWDAEPQPFMGAVISEQAAQGLVAAQAQLLALGGKSLLEMTQLQAGTGLLTPGII-DVTGVAELP 372 (487)
T ss_pred HHHHHHHHHhcCcCCCCCcCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccCCCCeeEecEEe-ccCCCChHH
Confidence 999999999999999996 788999999999999999999999999999999988655456799999999 688999999
Q ss_pred ccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC-CCCCCCCCCCCCCCCCC
Q 014515 319 KDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV-FDAAIPFGGYKQSGQGR 397 (423)
Q Consensus 319 ~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~pfgG~~~SG~g~ 397 (423)
+||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||+... ..+.+||||+|.||+|+
T Consensus 373 ~eE~FGPVl~V~~~~~~deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~ 452 (487)
T PRK09457 373 DEEYFGPLLQVVRYDDFDEAIRLANNTRFGLSAGLLSDDREDYDQFLLEIRAGIVNWNKPLTGASSAAPFGGVGASGNHR 452 (487)
T ss_pred hCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCCCCcccccCCC
Confidence 99999999999999999999999999999999999999999999999999999999997644 34678999999999999
Q ss_pred cchHHHHHhhheeeEEEEecCC
Q 014515 398 EKGSYSLSNYLQVKAVVTALKN 419 (423)
Q Consensus 398 ~~g~~~l~~~~~~k~v~~~~~~ 419 (423)
++|..+ .+|++.|+++++.++
T Consensus 453 ~~g~~~-~~~~~~k~~~~~~~~ 473 (487)
T PRK09457 453 PSAYYA-ADYCAYPMASLESDS 473 (487)
T ss_pred CCchhH-hhheeeeEEEEeccc
Confidence 999555 559999999888643
|
|
| >PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-86 Score=680.59 Aligned_cols=413 Identities=37% Similarity=0.574 Sum_probs=385.2
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCC-C--CCCCceeEe
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP-A--DGPYHVQTL 77 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~-~--~~~~~~~~~ 77 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++.. |+..++..+++++..+++....... . ......+..
T Consensus 73 ~~~~~R~~iL~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (524)
T PRK09407 73 TPVRERAAVLLRFHDLVLENREELLDLVQLETGKARRHAFE-EVLDVALTARYYARRAPKLLAPRRRAGALPVLTKTTEL 151 (524)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhhCCccccccCCCCceEEEE
Confidence 57899999999999999999999999999999999998864 9999999999999887665443221 1 112467889
Q ss_pred eccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcc
Q 014515 78 HEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH 157 (423)
Q Consensus 78 ~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~ 157 (423)
++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++.+.++.|+.|
T Consensus 152 ~~P~GVV~~I~P~N~Pl~~~~~~~~~ALaaGN~VIlKPs~~tp~~~~~l~~ll~eaGlP~gvv~~v~g~~~~~~~~L~~~ 231 (524)
T PRK09407 152 RQPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTPLTALAAVELLYEAGLPRDLWQVVTGPGPVVGTALVDN 231 (524)
T ss_pred EecceEEEEEeCCCChHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCcccEEEEecCCchHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999777888999876
Q ss_pred cCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccH
Q 014515 158 MEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 237 (423)
Q Consensus 158 ~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~ 237 (423)
+|.|+||||+++|+.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++
T Consensus 232 --~d~V~fTGs~~~g~~v~~~aa~-~~~~v~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~sGQ~C~a~~rv~V~~~v~ 308 (524)
T PRK09407 232 --ADYLMFTGSTATGRVLAEQAGR-RLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIY 308 (524)
T ss_pred --CCEEEEECCHHHHHHHHHHHHh-cCCcEEEECCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHH
Confidence 7899999999999999999887 7899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC-CCCceeecEEEecCCCccc
Q 014515 238 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-AKGYYIKPTVFTGVKDDML 316 (423)
Q Consensus 238 ~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~-~~g~~~~Ptvl~~~~~~~~ 316 (423)
|+|+++|+++++++++|+|.++++++||++++++++++++++++++++|+++++||.... ..|+|++|||+.++++++.
T Consensus 309 d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~~g~~~~Ptvl~~v~~~~~ 388 (524)
T PRK09407 309 DEFVRAFVAAVRAMRLGAGYDYSADMGSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLGPLFYEPTVLTGVTPDME 388 (524)
T ss_pred HHHHHHHHHHHHhcCCCCCCCcCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCceEeCEEEeCCCCCCh
Confidence 999999999999999999999999999999999999999999999999999999997432 2578999999999999999
Q ss_pred ccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC---CCCCCCCCCCCCC
Q 014515 317 IAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV---FDAAIPFGGYKQS 393 (423)
Q Consensus 317 ~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~---~~~~~pfgG~~~S 393 (423)
+++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|.|+||+... .++.+||||+|.|
T Consensus 389 i~~eE~FGPvl~v~~~~~~deai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~~PfGG~k~S 468 (524)
T PRK09407 389 LAREETFGPVVSVYPVADVDEAVERANDTPYGLNASVWTGDTARGRAIAARIRAGTVNVNEGYAAAWGSVDAPMGGMKDS 468 (524)
T ss_pred HHhCCCCCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCcCcCCCCCCCCCcccc
Confidence 9999999999999999999999999999999999999999999999999999999999998643 3467899999999
Q ss_pred CCCCcchHHHHHhhheeeEEEEec
Q 014515 394 GQGREKGSYSLSNYLQVKAVVTAL 417 (423)
Q Consensus 394 G~g~~~g~~~l~~~~~~k~v~~~~ 417 (423)
|+|+++|.+|+++||+.|+|++..
T Consensus 469 G~G~~~g~~~l~~ft~~k~v~~~~ 492 (524)
T PRK09407 469 GLGRRHGAEGLLKYTESQTIATQR 492 (524)
T ss_pred ccCccchHHHHHHhCCeEEEEEcc
Confidence 999999999999999999998764
|
|
| >cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-86 Score=678.00 Aligned_cols=413 Identities=35% Similarity=0.574 Sum_probs=386.6
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccC--CCCCCCceeEee
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA--PADGPYHVQTLH 78 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 78 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||+.++.. |+..+++.+++++.++....+... +...+...+..+
T Consensus 74 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (500)
T cd07083 74 WPQEDRARLLLKAADLLRRRRRELIATLTYEVGKNWVEAID-DVAEAIDFIRYYARAALRLRYPAVEVVPYPGEDNESFY 152 (500)
T ss_pred CCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCCceEEEEE
Confidence 57899999999999999999999999999999999998764 999999999999988876655432 222345678889
Q ss_pred ccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhccc
Q 014515 79 EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHM 158 (423)
Q Consensus 79 ~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~ 158 (423)
+|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++.+.+..|+.||
T Consensus 153 ~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaGlP~gvv~~v~g~~~~~~~~L~~~~ 232 (500)
T cd07083 153 VGLGAGVVISPWNFPVAIFTGMIVAPVAVGNTVIAKPAEDAVVVGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHE 232 (500)
T ss_pred eccceEEEEcCCccHHHHHHHHHHHHHHcCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCceEEEeCCCchhHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999997778899999999
Q ss_pred CcceEeeecCchHHHHHHHHHhhCCC------CceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEE
Q 014515 159 EVDKLAFTGSTTTGKIVLQLAAKSNL------KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFV 232 (423)
Q Consensus 159 ~v~~v~~tGs~~~~~~v~~~~a~~~~------~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V 232 (423)
++|.|+||||+.+|+.|.+.+++ ++ +|+++|+|||||+||++|+|++.|++.+++++|.|+||.|+++++|||
T Consensus 233 ~v~~v~ftGs~~~g~~v~~~aa~-~~~~~~~~~~v~lElgG~~~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V 311 (500)
T cd07083 233 RIRGINFTGSLETGKKIYEAAAR-LAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLIL 311 (500)
T ss_pred CcCEEEEECcHHHHHHHHHHHhh-ccccccccCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeeEEE
Confidence 99999999999999999998887 44 899999999999999999999999999999999999999999999999
Q ss_pred eCccHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCC
Q 014515 233 HESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVK 312 (423)
Q Consensus 233 ~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~ 312 (423)
|++++|+|+++|+++++++++|+|.++++++||++++.+++++++++++++++| ++++||...+..|+|+.|||+.+++
T Consensus 312 ~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~g-~vl~gg~~~~~~g~~~~Ptvl~~~~ 390 (500)
T cd07083 312 TQGAYEPVLERLLKRAERLSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEG-QLVLGGKRLEGEGYFVAPTVVEEVP 390 (500)
T ss_pred cHHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCC-EEEeCCCcCCCCCeEEccEEEeCCC
Confidence 999999999999999999999999999999999999999999999999998877 9999997655568999999999999
Q ss_pred CcccccccccccCeeEEEecC--CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCC--CCCCCC
Q 014515 313 DDMLIAKDEIFGPVQSILKYK--DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFD--AAIPFG 388 (423)
Q Consensus 313 ~~~~~~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~--~~~pfg 388 (423)
+++.+++||+||||++|++|+ |++|||+++|+++|||+++|||+|.+++.++++++++|+|+||+.+... +.+|||
T Consensus 391 ~~~~~~~eE~FgPvl~v~~~~d~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfG 470 (500)
T cd07083 391 PKARIAQEEIFGPVLSVIRYKDDDFAEALEVANSTPYGLTGGVYSRKREHLEEARREFHVGNLYINRKITGALVGVQPFG 470 (500)
T ss_pred CCChHhhCCCCCceEEEEEeCCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCC
Confidence 999999999999999999999 9999999999999999999999999999999999999999999875433 568999
Q ss_pred CCCCCCCC-CcchHHHHHhhheeeEEEEe
Q 014515 389 GYKQSGQG-REKGSYSLSNYLQVKAVVTA 416 (423)
Q Consensus 389 G~~~SG~g-~~~g~~~l~~~~~~k~v~~~ 416 (423)
|+|.||+| +++|.+++++|++.|+++.+
T Consensus 471 G~k~SG~G~~~~g~~~l~~~~~~k~~~~~ 499 (500)
T cd07083 471 GFKLSGTNAKTGGPHYLRRFLEMKAVAER 499 (500)
T ss_pred ccccccCCCcccCHHHHHHhhheeEEEEc
Confidence 99999999 68899999999999998765
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. |
| >cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-86 Score=667.58 Aligned_cols=409 Identities=32% Similarity=0.469 Sum_probs=379.9
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++.. |+..+++.+++++....+..+.......+...+..++|
T Consensus 19 ~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 97 (431)
T cd07095 19 LSLEERAAILRRFAELLKANKEELARLISRETGKPLWEAQT-EVAAMAGKIDISIKAYHERTGERATPMAQGRAVLRHRP 97 (431)
T ss_pred CCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcccCCCCceEEEEEec
Confidence 57899999999999999999999999999999999999875 99999999999988776665443322235567889999
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 160 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v 160 (423)
+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++ +.+.+..|+.|+++
T Consensus 98 ~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l~~~~~~ag~P~g~~~~v~g-~~~~~~~l~~~~~v 176 (431)
T cd07095 98 HGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPGVLNLVQG-GRETGEALAAHEGI 176 (431)
T ss_pred ceEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCCCCcHHHHHHHHHHHHhCcChhHheEEeC-cHHHHHHHhcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999998 45678999999999
Q ss_pred ceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCc-cHHH
Q 014515 161 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES-VYDQ 239 (423)
Q Consensus 161 ~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~-~~~~ 239 (423)
|.|+||||+++|+.|++.++.+..+++++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++ ++|+
T Consensus 177 ~~v~ftGs~~~g~~i~~~~a~~~~~~~~lElgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~i~d~ 256 (431)
T cd07095 177 DGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQSAFLTAGQRCTCARRLIVPDGAVGDA 256 (431)
T ss_pred CEEEEECcHHHHHHHHHHhhccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEEcCcchHHH
Confidence 999999999999999998775457899999999999999999999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCcccccc
Q 014515 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAK 319 (423)
Q Consensus 240 f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~ 319 (423)
|+++|++++.++++|+|.++++.+||+++..+++++.+++++++++|+++++||...+..|+|++|||+ .+++++.+++
T Consensus 257 f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~v~~a~~~ga~~l~gg~~~~~~g~~~~Ptv~-~v~~~~~i~~ 335 (431)
T cd07095 257 FLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLALGGEPLLAMERLVAGTAFLSPGII-DVTDAADVPD 335 (431)
T ss_pred HHHHHHHHHHhCCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCEEEeCCCcCCCCCeEEcCEEE-ecCCCChHHh
Confidence 999999999999999999999999999999999999999999999999999999765557899999999 5888999999
Q ss_pred cccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC-CCCCCCCCCCCCCCCCCc
Q 014515 320 DEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV-FDAAIPFGGYKQSGQGRE 398 (423)
Q Consensus 320 ~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~pfgG~~~SG~g~~ 398 (423)
||+||||++|++|+|++||++++|+++|||++||||+|.++++++++++++|.|+||+... ..+.+||||+|.||+|++
T Consensus 336 eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~ 415 (431)
T cd07095 336 EEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALFERFLARIRAGIVNWNRPTTGASSTAPFGGVGLSGNHRP 415 (431)
T ss_pred CCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccccCCCC
Confidence 9999999999999999999999999999999999999999999999999999999997654 345689999999999999
Q ss_pred chHHHHHhhheeeEE
Q 014515 399 KGSYSLSNYLQVKAV 413 (423)
Q Consensus 399 ~g~~~l~~~~~~k~v 413 (423)
+|.+|+++|+. |++
T Consensus 416 ~g~~~~~~~~~-~~~ 429 (431)
T cd07095 416 SAYYAADYCAY-PVA 429 (431)
T ss_pred ChHHHHHHHhh-hhc
Confidence 99999995544 543
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. |
| >cd07099 ALDH_DDALDH Methylomonas sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-86 Score=671.67 Aligned_cols=410 Identities=39% Similarity=0.598 Sum_probs=384.3
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCcc-CC-C--CCCCceeE
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT-AP-A--DGPYHVQT 76 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~-~~-~--~~~~~~~~ 76 (423)
+|.++|.++|+++++.|++++++|++++++|+|||..++.. |+..+++.+++++..+.+..... .+ . ..+...+.
T Consensus 37 ~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (453)
T cd07099 37 LGVEGRAQRLLRWKRALADHADELAELLHAETGKPRADAGL-EVLLALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATV 115 (453)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccccCcccCCCceeEE
Confidence 57899999999999999999999999999999999987764 99999999999998876654332 11 1 23456788
Q ss_pred eeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhc
Q 014515 77 LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALAS 156 (423)
Q Consensus 77 ~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~ 156 (423)
+++|+|||++|+|||+|+...++++++||++||+||+|||+.+|.++..|.+++.++|+|+|+++++++++ +.+..|++
T Consensus 116 ~~~P~Gvv~~I~p~N~P~~~~~~~l~~ALaaGN~vilKps~~~p~~~~~l~~~l~~ag~P~g~~~vv~g~~-~~~~~l~~ 194 (453)
T cd07099 116 EYRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPLVGELLAEAWAAAGPPQGVLQVVTGDG-ATGAALID 194 (453)
T ss_pred EEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHcCCCCCeEEEEeCCc-hHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999865 67888888
Q ss_pred ccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCcc
Q 014515 157 HMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 236 (423)
Q Consensus 157 ~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~ 236 (423)
| .+|.|+||||+++|+.|.+.++. +++|+++|+|||||+||++|+|++.|++.+++++|.++||.|+++++||||+++
T Consensus 195 ~-~vd~V~ftGs~~~g~~i~~~aa~-~~~~~~lelgG~~p~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~ri~V~~~i 272 (453)
T cd07099 195 A-GVDKVAFTGSVATGRKVMAAAAE-RLIPVVLELGGKDPMIVLADADLERAAAAAVWGAMVNAGQTCISVERVYVHESV 272 (453)
T ss_pred C-CCCEEEEECCHHHHHHHHHHHHh-cCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHH
Confidence 7 59999999999999999999887 789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCccc
Q 014515 237 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDML 316 (423)
Q Consensus 237 ~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~ 316 (423)
+|+|+++|+++++++++|+|.|+++++||++++.+++++.+++++++++|+++++||......|.|++|||+.+++++++
T Consensus 273 ~d~f~~~l~~~~~~l~~G~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptil~~~~~~~~ 352 (453)
T cd07099 273 YDEFVARLVAKARALRPGADDIGDADIGPMTTARQLDIVRRHVDDAVAKGAKALTGGARSNGGGPFYEPTVLTDVPHDMD 352 (453)
T ss_pred HHHHHHHHHHHHHhccCCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCeEEecEEEecCCCCCH
Confidence 99999999999999999999999999999999999999999999999999999999976434689999999999999999
Q ss_pred ccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC--CCCCCCCCCCCCCC
Q 014515 317 IAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSG 394 (423)
Q Consensus 317 ~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~pfgG~~~SG 394 (423)
++++|+||||++|++|+|.||||+++|+++|||++||||+|.++++++++++++|.|+||+... ..+.+||||+|.||
T Consensus 353 ~~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG 432 (453)
T cd07099 353 VMREETFGPVLPVMPVADEDEAIALANDSRYGLSASVFSRDLARAEAIARRLEAGAVSINDVLLTAGIPALPFGGVKDSG 432 (453)
T ss_pred HHhCCCcCCeeEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCCCCCccccc
Confidence 9999999999999999999999999999999999999999999999999999999999998754 45789999999999
Q ss_pred CCCcchHHHHHhhheeeEEE
Q 014515 395 QGREKGSYSLSNYLQVKAVV 414 (423)
Q Consensus 395 ~g~~~g~~~l~~~~~~k~v~ 414 (423)
+|+++|.+++++||+.|+++
T Consensus 433 ~g~~~g~~~~~~~t~~k~v~ 452 (453)
T cd07099 433 GGRRHGAEGLREFCRPKAIA 452 (453)
T ss_pred CCccChHHHHHHhcceEEEe
Confidence 99999999999999999875
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. |
| >cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-86 Score=671.30 Aligned_cols=411 Identities=43% Similarity=0.706 Sum_probs=386.6
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCC-CCCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++...|+..+++.+++++...+...+...+. ..+...+..++
T Consensus 38 ~~~~~R~~~L~~~~~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (450)
T cd07092 38 TTPAERSKALLKLADAIEENAEELAALESRNTGKPLHLVRDDELPGAVDNFRFFAGAARTLEGPAAGEYLPGHTSMIRRE 117 (450)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCccCCCceeEEEEe
Confidence 57899999999999999999999999999999999977665699999999999998776655432211 12345678999
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccC
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 159 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~ 159 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.+ |+|+|+++++++++.+.++.|+.|++
T Consensus 118 P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~~~~l~~~~~~-glP~g~~~~v~g~~~~~~~~l~~~~~ 196 (450)
T cd07092 118 PIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLTTLLLAELAAE-VLPPGVVNVVCGGGASAGDALVAHPR 196 (450)
T ss_pred ccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHh-cCCcccEEEeecCchHHHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999999999999 99999999999877778899999999
Q ss_pred cceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHH
Q 014515 160 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239 (423)
Q Consensus 160 v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~ 239 (423)
++.|+||||+.+|+.|++.+++ +++|+++|+||+||+||++|||++.|++.+++++|.|+||.|+++++||||++++++
T Consensus 197 v~~V~fTGs~~~g~~v~~~a~~-~~~~~~lelgG~~p~iV~~dAdl~~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~ 275 (450)
T cd07092 197 VRMVSLTGSVRTGKKVARAAAD-TLKRVHLELGGKAPVIVFDDADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDE 275 (450)
T ss_pred CCEEEEECcHHHHHHHHHHHhh-cCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEEeHHHHHH
Confidence 9999999999999999999887 789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCcccccc
Q 014515 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAK 319 (423)
Q Consensus 240 f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~ 319 (423)
|+++|+++++++++|+|.++++++||+++++++++++++|+++. +|+++++||...+..|+|++|||+.++++++.+++
T Consensus 276 f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~i~~~i~~a~-~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~ 354 (450)
T cd07092 276 FVAALVEAVSAIRVGDPDDEDTEMGPLNSAAQRERVAGFVERAP-AHARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQ 354 (450)
T ss_pred HHHHHHHHHhhCCcCCCCCCCCccCcccCHHHHHHHHHHHHHHH-cCCEEEeCCCCCCCCccEEeeEEEEcCCCCChHHh
Confidence 99999999999999999999999999999999999999999998 99999999986555789999999999999999999
Q ss_pred cccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCCCcc
Q 014515 320 DEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREK 399 (423)
Q Consensus 320 ~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~ 399 (423)
+|+||||++|++|+|.||||+++|+++|||++||||+|.++++++++++++|.|+||+.....+.+||||+|.||+|+++
T Consensus 355 ~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~~~SG~G~~~ 434 (450)
T cd07092 355 EEIFGPVVTVQPFDDEDEAIELANDVEYGLASSVWTRDVGRAMRLSARLDFGTVWVNTHIPLAAEMPHGGFKQSGYGKDL 434 (450)
T ss_pred CCCcCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCccEEEECCCCCCCCCCCcCCcccCcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999988777788999999999999999
Q ss_pred hHHHHHhhheeeEEE
Q 014515 400 GSYSLSNYLQVKAVV 414 (423)
Q Consensus 400 g~~~l~~~~~~k~v~ 414 (423)
|.+++++|++.|+++
T Consensus 435 g~~~~~~~~~~k~~~ 449 (450)
T cd07092 435 SIYALEDYTRIKHVM 449 (450)
T ss_pred hHHHHHHHheeeEEe
Confidence 999999999999885
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. |
| >PTZ00381 aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-86 Score=672.70 Aligned_cols=408 Identities=30% Similarity=0.459 Sum_probs=376.1
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCcc-CC---CCCCCceeE
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT-AP---ADGPYHVQT 76 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~-~~---~~~~~~~~~ 76 (423)
+|.++|.++|+++++.|++++++|++++++|+|||..++...|+..+++.++++++..++..... .. ...+...++
T Consensus 26 ~~~~~R~~~L~~l~~~l~~~~~~i~~a~~~d~Gk~~~ea~~~Ev~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 105 (493)
T PTZ00381 26 RPLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPFETKMTEVLLTVAEIEHLLKHLDEYLKPEKVDTVGVFGPGKSYI 105 (493)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccCCccccCCCceEE
Confidence 47899999999999999999999999999999999999877799999999999887665543221 11 112345788
Q ss_pred eeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhc
Q 014515 77 LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALAS 156 (423)
Q Consensus 77 ~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~ 156 (423)
+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++ +|+|++++++| +.+.+..|+.
T Consensus 106 ~~~PlGVV~iI~PwN~Pl~l~~~~l~~ALaaGN~VIlKPse~tp~t~~~l~~ll~~~-lp~~~v~vv~g-~~~~~~~l~~ 183 (493)
T PTZ00381 106 IPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLLTKY-LDPSYVRVIEG-GVEVTTELLK 183 (493)
T ss_pred EEecCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCEEEEecC-CHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999996 99999999998 6778888988
Q ss_pred ccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCcc
Q 014515 157 HMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 236 (423)
Q Consensus 157 ~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~ 236 (423)
|+ +|.|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||+++
T Consensus 184 ~~-~d~i~FTGS~~vG~~V~~~aa~-~l~pv~lElGGk~p~iV~~dAdl~~Aa~~i~~g~~~naGQ~C~A~~~vlV~~~i 261 (493)
T PTZ00381 184 EP-FDHIFFTGSPRVGKLVMQAAAE-NLTPCTLELGGKSPVIVDKSCNLKVAARRIAWGKFLNAGQTCVAPDYVLVHRSI 261 (493)
T ss_pred CC-CCEEEEECCHHHHHHHHHHHHh-cCCcEEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhhcCCcCCCCCEEEEeHHH
Confidence 86 9999999999999999999887 899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCccc
Q 014515 237 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDML 316 (423)
Q Consensus 237 ~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~ 316 (423)
+|+|+++|++.++++. |++.++++++||+++.++++++.++++ ++|+++++||.. +..+.|++|||+.+++++++
T Consensus 262 ~d~f~~~l~~~~~~~~-g~~~~~~~~~gpli~~~~~~ri~~~i~---~~ga~~~~gG~~-~~~~~~i~Ptvl~~v~~~~~ 336 (493)
T PTZ00381 262 KDKFIEALKEAIKEFF-GEDPKKSEDYSRIVNEFHTKRLAELIK---DHGGKVVYGGEV-DIENKYVAPTIIVNPDLDSP 336 (493)
T ss_pred HHHHHHHHHHHHHHHh-CCCCccCCCcCCCCCHHHHHHHHHHHH---hCCCcEEECCCc-CCCCCeEeeEEEecCCCCCh
Confidence 9999999999999986 766688999999999999999999996 468999999975 34678999999999999999
Q ss_pred ccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcC--CCCCCCCCCCCCCCC
Q 014515 317 IAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFD--VFDAAIPFGGYKQSG 394 (423)
Q Consensus 317 ~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~--~~~~~~pfgG~~~SG 394 (423)
+++||+||||++|++|+|+||||+++|++++||++||||+|.+.++++++++++|.|+||+.. ...+.+||||+|.||
T Consensus 337 i~~eEiFGPVl~v~~~~~~deAi~~~n~~~~gLa~~vft~d~~~~~~~~~~~~sG~v~IN~~~~~~~~~~~PFGG~g~SG 416 (493)
T PTZ00381 337 LMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDKRHKELVLENTSSGAVVINDCVFHLLNPNLPFGGVGNSG 416 (493)
T ss_pred HHhccccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEECCccccccCCCCCCCCcCccc
Confidence 999999999999999999999999999999999999999999999999999999999999864 345789999999999
Q ss_pred CCCcchHHHHHhhheeeEEEEec
Q 014515 395 QGREKGSYSLSNYLQVKAVVTAL 417 (423)
Q Consensus 395 ~g~~~g~~~l~~~~~~k~v~~~~ 417 (423)
+|+++|.+|+++||+.|+|+.+.
T Consensus 417 ~G~~~G~~g~~~fs~~k~v~~~~ 439 (493)
T PTZ00381 417 MGAYHGKYGFDTFSHPKPVLNKS 439 (493)
T ss_pred ccccchHHHHHhccceeEEEEcc
Confidence 99999999999999999998774
|
|
| >PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-86 Score=677.85 Aligned_cols=413 Identities=36% Similarity=0.568 Sum_probs=384.9
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCcc-CCCCCCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT-APADGPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||+.++.. |+..+++.+++++..+.+..... .....+...+.+++
T Consensus 92 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~g~~~~~~~~ 170 (514)
T PRK03137 92 WSPEDRARILLRAAAIIRRRKHEFSAWLVKEAGKPWAEADA-DTAEAIDFLEYYARQMLKLADGKPVESRPGEHNRYFYI 170 (514)
T ss_pred CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccccCCCCceEEEEEe
Confidence 57899999999999999999999999999999999999885 99999999999998876654222 22223456788999
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccC
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 159 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~ 159 (423)
|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++++.+.+..|+.||+
T Consensus 171 P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~a~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~ 250 (514)
T PRK03137 171 PLGVGVVISPWNFPFAIMAGMTLAAIVAGNTVLLKPASDTPVIAAKFVEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPK 250 (514)
T ss_pred cCcEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEeecCchHHHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999877788999999999
Q ss_pred cceEeeecCchHHHHHHHHHhhC-----CCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeC
Q 014515 160 VDKLAFTGSTTTGKIVLQLAAKS-----NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHE 234 (423)
Q Consensus 160 v~~v~~tGs~~~~~~v~~~~a~~-----~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~ 234 (423)
++.|+||||+.+|+.|++.++.. +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+
T Consensus 251 v~~V~fTGs~~~G~~i~~~aa~~~~~~~~l~~v~lElgGk~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~ 330 (514)
T PRK03137 251 TRFITFTGSREVGLRIYERAAKVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHE 330 (514)
T ss_pred cCEEEEECCcHHHHHHHHHHhcccccccccceEEecCCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCccCeEEEEeH
Confidence 99999999999999999988751 5799999999999999999999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCc
Q 014515 235 SVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDD 314 (423)
Q Consensus 235 ~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~ 314 (423)
+++|+|+++|+++++++++|+|.++. ++||++++.+++++.+++++++++ +++++||...+..|+|++|||+.+++++
T Consensus 331 ~v~d~f~~~l~~~~~~l~~g~p~~~~-~~Gpli~~~~~~~v~~~v~~a~~~-~~vl~Gg~~~~~~g~~~~Ptvl~~v~~~ 408 (514)
T PRK03137 331 DVYDEVLEKVVELTKELTVGNPEDNA-YMGPVINQASFDKIMSYIEIGKEE-GRLVLGGEGDDSKGYFIQPTIFADVDPK 408 (514)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCCcc-CcCCCCCHHHHHHHHHHHHHHHhC-CEEEeCCCcCCCCceEEeeEEEeCCCCC
Confidence 99999999999999999999999998 999999999999999999999887 6999999765456899999999999999
Q ss_pred ccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC--CCCCCCCCCCC
Q 014515 315 MLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF--DAAIPFGGYKQ 392 (423)
Q Consensus 315 ~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~--~~~~pfgG~~~ 392 (423)
+++++||+||||++|++|+|++|||+++|+++|||++||||+|.++++++++++++|+|+||+.+.. .+.+||||+|.
T Consensus 409 ~~~~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~ 488 (514)
T PRK03137 409 ARIMQEEIFGPVVAFIKAKDFDHALEIANNTEYGLTGAVISNNREHLEKARREFHVGNLYFNRGCTGAIVGYHPFGGFNM 488 (514)
T ss_pred CHHHhCCCCCceEEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCccc
Confidence 9999999999999999999999999999999999999999999999999999999999999986433 35689999999
Q ss_pred CCCC-CcchHHHHHhhheeeEEEEe
Q 014515 393 SGQG-REKGSYSLSNYLQVKAVVTA 416 (423)
Q Consensus 393 SG~g-~~~g~~~l~~~~~~k~v~~~ 416 (423)
||+| +++|.+++++||+.|+|...
T Consensus 489 SG~G~~~gg~~~l~~ft~~k~v~~~ 513 (514)
T PRK03137 489 SGTDSKAGGPDYLLLFLQAKTVSEM 513 (514)
T ss_pred ccCCcccCCHHHHHHhceEEEEEEe
Confidence 9999 69999999999999998765
|
|
| >cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-86 Score=669.23 Aligned_cols=407 Identities=40% Similarity=0.600 Sum_probs=381.4
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCC-----CCCcee
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-----GPYHVQ 75 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~ 75 (423)
+|.++|.++|+++++.|++++++|++++++|+|||..++.. |+..+++.+++++.......++..+.. .+...+
T Consensus 37 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (451)
T cd07146 37 LTRYQRSAILNKAAALLEARREEFARLITLESGLCLKDTRY-EVGRAADVLRFAAAEALRDDGESFSCDLTANGKARKIF 115 (451)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEE
Confidence 57899999999999999999999999999999999999875 999999999999887765544332211 234567
Q ss_pred EeeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhh
Q 014515 76 TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 155 (423)
Q Consensus 76 ~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~ 155 (423)
..++|+|||++|+|||||++..++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++.+++..|+
T Consensus 116 ~~~~P~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~ 195 (451)
T cd07146 116 TLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEKTPLSAIYLADLLYEAGLPPDMLSVVTGEPGEIGDELI 195 (451)
T ss_pred EEEeccceEEEEccCChHHHHHHHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHh
Confidence 88999999999999999999999999999999999999999999999999999999999999999999987778899999
Q ss_pred cccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCc
Q 014515 156 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES 235 (423)
Q Consensus 156 ~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~ 235 (423)
.||++|.|+||||+.+|+.|.+.++ .+|+++|+|||||+||++|||++.|++.+++++|.++||.|+++++||||++
T Consensus 196 ~~~~i~~V~fTGs~~~g~~i~~~a~---~~~~~lElGG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~ 272 (451)
T cd07146 196 THPDVDLVTFTGGVAVGKAIAATAG---YKRQLLELGGNDPLIVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHES 272 (451)
T ss_pred cCCCCCEEEEECCHHHHHHHHHHhc---CCceeeecCCCceEEECCCCCHHHHHHHHHHHHHhhCCCCCCCCceEEEchH
Confidence 9999999999999999999998764 4789999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCcc
Q 014515 236 VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDM 315 (423)
Q Consensus 236 ~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~ 315 (423)
++|+|+++|++++.++++|+|.|+++++||++++.+++++++++++++++|+++++||.. .|+|++|||+.++++++
T Consensus 273 i~d~f~~~l~~~~~~l~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~vl~gg~~---~g~~~~Ptvl~~~~~~~ 349 (451)
T cd07146 273 VADEFVDLLVEKSAALVVGDPMDPATDMGTVIDEEAAIQIENRVEEAIAQGARVLLGNQR---QGALYAPTVLDHVPPDA 349 (451)
T ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCc---CCEEEcCEEeecCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999964 48899999999999999
Q ss_pred cccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC-CCCCCCCCCCCCC
Q 014515 316 LIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSG 394 (423)
Q Consensus 316 ~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~pfgG~~~SG 394 (423)
++++||+||||++|++|+|+|||++++|+++|||++||||+|.++++++++++++|+|+||+.+.. .+.+||||+|.||
T Consensus 350 ~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG 429 (451)
T cd07146 350 ELVTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCTNDLDTIKRLVERLDVGTVNVNEVPGFRSELSPFGGVKDSG 429 (451)
T ss_pred HHHhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHCCcceEEECCCCCCCCCCCCcCcccccC
Confidence 999999999999999999999999999999999999999999999999999999999999986544 4678999999999
Q ss_pred C-CCcchHHHHHhhheeeEEE
Q 014515 395 Q-GREKGSYSLSNYLQVKAVV 414 (423)
Q Consensus 395 ~-g~~~g~~~l~~~~~~k~v~ 414 (423)
+ |+++|++|+++||+.|+++
T Consensus 430 ~~g~~~g~~~~~~f~~~k~~~ 450 (451)
T cd07146 430 LGGKEGVREAMKEMTNVKTYS 450 (451)
T ss_pred CCcccChHHHHHHHhceeEEe
Confidence 5 8999999999999999875
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. |
| >cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-86 Score=666.63 Aligned_cols=409 Identities=40% Similarity=0.654 Sum_probs=385.9
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCC-CCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|++++++|++++++|+|||..++.. |+..+++.+++++....+..+...+.. .+...+.+++
T Consensus 19 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~-ei~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 97 (431)
T cd07104 19 TPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKAAF-EVGAAIAILREAAGLPRRPEGEILPSDVPGKESMVRRV 97 (431)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEe
Confidence 57899999999999999999999999999999999998875 999999999999988766655443332 4556789999
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHH-HHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhccc
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS-ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHM 158 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~-~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~ 158 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.+ +..+.+++.++|+|+|+++++++++.+.++.|+.|+
T Consensus 98 P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~ 177 (431)
T cd07104 98 PLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPKGVLNVVPGGGSEIGDALVEHP 177 (431)
T ss_pred eeeeEEEECCCCcHHHHHHHHHHHHHHcCCeEEeeCCCCChHHHHHHHHHHHHHcCCCcccEEEeeCCchhHHHHHhcCC
Confidence 9999999999999999999999999999999999999999988 568999999999999999999987777899999999
Q ss_pred CcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHH
Q 014515 159 EVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 238 (423)
Q Consensus 159 ~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~ 238 (423)
+++.|+||||+.+++.|++.+++ +++|+++|+||+||+||++|+|++.|++.+++++|.|+||.|+++++||||++++|
T Consensus 178 ~i~~V~ftGs~~~g~~v~~~aa~-~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~ 256 (431)
T cd07104 178 RVRMISFTGSTAVGRHIGELAGR-HLKKVALELGGNNPLIVLDDADLDLAVSAAAFGAFLHQGQICMAAGRILVHESVYD 256 (431)
T ss_pred CCCEEEEECCHHHHHHHHHHHhh-cCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEcHHHHH
Confidence 99999999999999999999887 88999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCccccc
Q 014515 239 QFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIA 318 (423)
Q Consensus 239 ~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~ 318 (423)
+|+++|++++..+++|+|.++++++||++++.+++++.+++++++.+|+++++||.. .|+|++|||+.+++++++++
T Consensus 257 ~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~G~~~~~gg~~---~g~~~~Ptvl~~~~~~~~~~ 333 (431)
T cd07104 257 EFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAVAAGARLLTGGTY---EGLFYQPTVLSDVTPDMPIF 333 (431)
T ss_pred HHHHHHHHHHHhcCcCCCCCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCC---CCceECCEEeecCCCCChhh
Confidence 999999999999999999999999999999999999999999999999999999864 58899999999999999999
Q ss_pred ccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCC-CCCCCCCCCCCCCCC
Q 014515 319 KDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFD-AAIPFGGYKQSGQGR 397 (423)
Q Consensus 319 ~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~-~~~pfgG~~~SG~g~ 397 (423)
+||+||||++|++|+|+||||+++|++++||++||||+|.++++++++++++|+|+||+++... +.+||||+|.||+|+
T Consensus 334 ~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~ 413 (431)
T cd07104 334 REEIFGPVAPVIPFDDDEEAVELANDTEYGLSAAVFTRDLERAMAFAERLETGMVHINDQTVNDEPHVPFGGVKASGGGR 413 (431)
T ss_pred hCcCcCCeEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCCcccccCCc
Confidence 9999999999999999999999999999999999999999999999999999999999976544 789999999999999
Q ss_pred cchHHHHHhhheeeEEE
Q 014515 398 EKGSYSLSNYLQVKAVV 414 (423)
Q Consensus 398 ~~g~~~l~~~~~~k~v~ 414 (423)
++|.+|+++|++.|+++
T Consensus 414 ~~g~~~l~~~~~~k~~~ 430 (431)
T cd07104 414 FGGPASLEEFTEWQWIT 430 (431)
T ss_pred cchHHHHHHhhceeEEe
Confidence 99999999999999975
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. |
| >cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-86 Score=670.37 Aligned_cols=407 Identities=37% Similarity=0.575 Sum_probs=380.8
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCC-----CCCCcee
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-----DGPYHVQ 75 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-----~~~~~~~ 75 (423)
+|.++|.++|+++++.|++++++|++++++|+|||..++.. |+..++..+++++..+.+..++..+. ..+...+
T Consensus 40 ~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (452)
T cd07147 40 LPAHRRAAILLHCVARLEERFEELAETIVLEAGKPIKDARG-EVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQGL 118 (452)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhCCcccccccccCCCCceeE
Confidence 57899999999999999999999999999999999999875 99999999999988776554433221 1234567
Q ss_pred EeeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhh
Q 014515 76 TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 155 (423)
Q Consensus 76 ~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~ 155 (423)
..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++++++++ .+.+..|+
T Consensus 119 ~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~l~~~l~~ag~P~g~v~~v~g~-~~~~~~l~ 197 (452)
T cd07147 119 VRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLKPASRTPLSALILGEVLAETGLPKGAFSVLPCS-RDDADLLV 197 (452)
T ss_pred EEEeceeEEEEEcCCCcHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCCCcCcEEEEeCC-ccchhHHh
Confidence 88999999999999999999999999999999999999999999999999999999999999999999984 56788999
Q ss_pred cccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCc
Q 014515 156 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES 235 (423)
Q Consensus 156 ~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~ 235 (423)
.|+++|.|+||||+.+|+.|.+.++. +|+++|+|||||+||++|+|++.|++.+++++|.|+||.|+++++||||++
T Consensus 198 ~~~~v~~v~fTGs~~~g~~v~~~a~~---~~v~lelgG~~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~ 274 (452)
T cd07147 198 TDERIKLLSFTGSPAVGWDLKARAGK---KKVVLELGGNAAVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRS 274 (452)
T ss_pred cCCCCCEEEEECCHHHHHHHHHHhCc---CceEeecCCCCcEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEchh
Confidence 99999999999999999999997653 699999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCcc
Q 014515 236 VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDM 315 (423)
Q Consensus 236 ~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~ 315 (423)
++|+|+++|++++.++++|+|.++++++||++++.+++++++++++++++|+++++||.. .|+|++|||+.++++++
T Consensus 275 i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~---~g~~~~Ptvl~~~~~~~ 351 (452)
T cd07147 275 VYDEFKSRLVARVKALKTGDPKDDATDVGPMISESEAERVEGWVNEAVDAGAKLLTGGKR---DGALLEPTILEDVPPDM 351 (452)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCc---CCEEEcCEEEeCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999974 48899999999999999
Q ss_pred cccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC-CCCCCCCCCCCCC
Q 014515 316 LIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSG 394 (423)
Q Consensus 316 ~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~pfgG~~~SG 394 (423)
+++++|+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+.+.. .+.+||||+|+||
T Consensus 352 ~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~~pfGG~~~SG 431 (452)
T cd07147 352 EVNCEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVFTRDLEKALRAWDELEVGGVVINDVPTFRVDHMPYGGVKDSG 431 (452)
T ss_pred hHHhCcCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHcCcceEEECCCCCCCCCCCCcCCccccc
Confidence 999999999999999999999999999999999999999999999999999999999999987654 4678999999999
Q ss_pred CCCcchHHHHHhhheeeEEEE
Q 014515 395 QGREKGSYSLSNYLQVKAVVT 415 (423)
Q Consensus 395 ~g~~~g~~~l~~~~~~k~v~~ 415 (423)
+|+++|.+|+++||+.|+|++
T Consensus 432 ~G~~~g~~~~~~~~~~k~i~~ 452 (452)
T cd07147 432 IGREGVRYAIEEMTEPRLLVI 452 (452)
T ss_pred cCCCChHHHHHHhcceeEEeC
Confidence 999999999999999999864
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. |
| >PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-87 Score=682.64 Aligned_cols=411 Identities=49% Similarity=0.793 Sum_probs=388.0
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
++.++|.++|+++++.|+++.++|++++++|+|||..++.. |+..+++.+++++.+++++.++..+.+.+...+..++|
T Consensus 48 ~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 126 (462)
T PF00171_consen 48 LPAAERARILERFADLLEERRDELAELIALETGKPIAEARG-EVDRAIDFLRYYADAARKLAGEVLPSDPGSRNYTRREP 126 (462)
T ss_dssp SSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTSSHHHHHH-HHHHHHHHHHHHHHHHHHHTEEEEEESTTEEEEEEEEE
T ss_pred hhhhhHHHHHHHHHHHHhhcccccccccccccccccccccc-hhhhhhhhhhhhhhcccceehhhccccccccccccccc
Confidence 57899999999999999999999999999999999999987 99999999999999998877655554567889999999
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 160 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v 160 (423)
+|||++|+|||+|+..+++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++.+.+..|+.||++
T Consensus 127 ~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VVlkps~~~~~~~~~l~~~~~~AglP~gvv~vv~g~~~~~~~~l~~~~~v 206 (462)
T PF00171_consen 127 LGVVLIITPWNFPLYLAVWKIAPALAAGNTVVLKPSEQAPLTALLLAELLEEAGLPPGVVNVVPGDGSEVGEALVSHPDV 206 (462)
T ss_dssp -SEEEEEE-SSSCTHHHHHHHHHHHHTT-EEEEEEBTTSHHHHHHHHHHHHHHTSTTTSEEEECSSTHHHHHHHHHTTTE
T ss_pred ccceeecccccccccccccchhhhhcccccceeeeccccccccccchhhccccccccccccccccccccccceeeecccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999888999999999999
Q ss_pred ceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHHH
Q 014515 161 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240 (423)
Q Consensus 161 ~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~f 240 (423)
+.|.||||+++++.|.+.+++ +++|+++|+||+||+||++|||++.|++.+++++|+|+||.|+++++||||++++|+|
T Consensus 207 ~~v~ftGs~~~g~~i~~~a~~-~~~~v~lelgG~~p~iV~~daDld~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f 285 (462)
T PF00171_consen 207 DLVSFTGSTATGRAIAKAAAK-NLKPVVLELGGKNPVIVDPDADLDKAAEAIVRGAFFNSGQSCTAPSRVLVHESIYDEF 285 (462)
T ss_dssp EEEEEESEHHHHHHHHHHHHT-TTSEEEEEECEEEEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHHHHH
T ss_pred ceeeecchhhhhhhhhhhccc-ccccccccccccceeeEecccccccccccccchhcccccccccccccccccccccchh
Confidence 999999999999999999886 7899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCC---cccCCCCceeecEEEecCCCcccc
Q 014515 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGG---ERLGAKGYYIKPTVFTGVKDDMLI 317 (423)
Q Consensus 241 ~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg---~~~~~~g~~~~Ptvl~~~~~~~~~ 317 (423)
+++|+++++++++|+|.++++++||+++..+++++++++++++.+|+++++|| ......|+|++|||+.+++++|++
T Consensus 286 ~~~l~~~~~~l~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~ 365 (462)
T PF00171_consen 286 VEALKERVAKLRVGDPLDESTDVGPLISKAQRERVKALIEDAVAEGAKVLCGGEPQEADPENGFFIPPTVLEDVPPDMPI 365 (462)
T ss_dssp HHHHHHHHHTSEBSSTTSTTCSBCHCSSHHHHHHHHHHHHHHHHTTSEEEEETSSSSBCSSSSTEEEEEEEESEHTTSHH
T ss_pred hhhhhhccccccccCCccccccccccccchhhhhcccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999 334467899999999999999999
Q ss_pred cccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCC-CCCCCCCCCCCC
Q 014515 318 AKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAA-IPFGGYKQSGQG 396 (423)
Q Consensus 318 ~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~-~pfgG~~~SG~g 396 (423)
+++|+||||++|++|+|++||++++|+++|||+++|||+|.++++++++++++|+|+||+++...+. +||||+|.||+|
T Consensus 366 ~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G 445 (462)
T PF00171_consen 366 MQEEIFGPVLPVVPYDDLDEAIALANDSEYGLTASVFSRDESRAERLARRLEAGRVWINDPPTGDPDGLPFGGFKQSGIG 445 (462)
T ss_dssp HHSC-SSSEEEEEEESSHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHHSTSSEEEESSSSTGGTTSSEBE-SGGGEES
T ss_pred cccccccccceecccccchhhhhcccccCCCceeEEecccccccccccccccccceeecCCcccccccCCCCCcccccCC
Confidence 9999999999999999999999999999999999999999999999999999999999998766555 599999999999
Q ss_pred CcchHHHHHhhheeeEE
Q 014515 397 REKGSYSLSNYLQVKAV 413 (423)
Q Consensus 397 ~~~g~~~l~~~~~~k~v 413 (423)
+++|.+|+++|++.|+|
T Consensus 446 ~~~g~~~l~~~~~~k~V 462 (462)
T PF00171_consen 446 REGGPEGLDEFTQIKTV 462 (462)
T ss_dssp EBSHHHHHHGTEEEEEE
T ss_pred cchHHHHHHHhCCccCC
Confidence 99999999999999986
|
2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A .... |
| >cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-86 Score=671.64 Aligned_cols=400 Identities=46% Similarity=0.765 Sum_probs=379.0
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||+.+++..|+..+++.+++++.+.+.... ....++|
T Consensus 78 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~----------~~~~~~P 147 (480)
T cd07111 78 LPGHVRARHLYRIARHIQKHQRLFAVLESLDNGKPIRESRDCDIPLVARHFYHHAGWAQLLDT----------ELAGWKP 147 (480)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC----------Cccccee
Confidence 578999999999999999999999999999999999998756899999999988877765422 1345799
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 160 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v 160 (423)
+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++ +.+..|+.||++
T Consensus 148 ~GVV~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~-~~~~~l~~~~~v 226 (480)
T cd07111 148 VGVVGQIVPWNFPLLMLAWKICPALAMGNTVVLKPAEYTPLTALLFAEICAEAGLPPGVLNIVTGNG-SFGSALANHPGV 226 (480)
T ss_pred cceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHhcCCCcccEEEEeCCc-hHHHHHhcCCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999854 678999999999
Q ss_pred ceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHHH
Q 014515 161 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240 (423)
Q Consensus 161 ~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~f 240 (423)
|.|+||||+.+|+.|.+.+++ .++|+++|+|||||+||++|+|++.|++.+++++|.|+||.|+++++||||++++|+|
T Consensus 227 ~~v~ftGs~~~g~~v~~~aa~-~~~~~~lElGGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~a~~ri~V~~~i~d~f 305 (480)
T cd07111 227 DKVAFTGSTEVGRALRRATAG-TGKKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEEL 305 (480)
T ss_pred CEEEEECCHHHHHHHHHHHhc-cCCcEEEEcCCCceEEECCCCCHHHHHHHHHHHHHhcCCCcCcCCceEEEcHHHHHHH
Confidence 999999999999999999887 7899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCccccccc
Q 014515 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKD 320 (423)
Q Consensus 241 ~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~ 320 (423)
+++|+++++++++|+|.++++++||++++.+++++++++++++++|+++++||...+..|+|++|||+.++++++.+++|
T Consensus 306 ~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~e 385 (480)
T cd07111 306 IRKLKERMSHLRVGDPLDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYPPTLFTNVPPASRIAQE 385 (480)
T ss_pred HHHHHHHHHhcCCCCCCCCCCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcC
Confidence 99999999999999999999999999999999999999999999999999998754456899999999999999999999
Q ss_pred ccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCCCcch
Q 014515 321 EIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKG 400 (423)
Q Consensus 321 E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g 400 (423)
|+||||++|++|+|.||||+++|+++|||++||||+|.+++.++++++++|+|+||+.....+.+||||+|.||+|+++|
T Consensus 386 E~FgPvl~v~~~~~~deai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G~~~g 465 (480)
T cd07111 386 EIFGPVLVVLTFRTAKEAVALANNTPYGLAASVWSENLSLALEVALSLKAGVVWINGHNLFDAAAGFGGYRESGFGREGG 465 (480)
T ss_pred CCCCCeeEeecCCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCEeeEEECCCCCCCCCCCcCCcccccCCccch
Confidence 99999999999999999999999999999999999999999999999999999999987777789999999999999999
Q ss_pred HHHHHhhheeeE
Q 014515 401 SYSLSNYLQVKA 412 (423)
Q Consensus 401 ~~~l~~~~~~k~ 412 (423)
.+|+++||+.|+
T Consensus 466 ~~~~~~~~~~k~ 477 (480)
T cd07111 466 KEGLYEYLRPSW 477 (480)
T ss_pred HHHHHHHhhccC
Confidence 999999999885
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. |
| >cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-86 Score=670.21 Aligned_cols=411 Identities=45% Similarity=0.734 Sum_probs=384.9
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCCh-hhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPF-EQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~-~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|++++++|++++++|+|||. .+++ .|+..+++.+++++.+.....+...+...+...+..++
T Consensus 38 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (457)
T cd07108 38 TPARERGKLLARIADALEARSEELARLLALETGNALRTQAR-PEAAVLADLFRYFGGLAGELKGETLPFGPDVLTYTVRE 116 (457)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCcHHHHH-HHHHHHHHHHHHHHHHHHHhCCceeccCCCeeEEEEee
Confidence 578999999999999999999999999999999997 5766 49999999999999887666555443333445678899
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccC
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 159 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~ 159 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++ +|+|++++++|++.+.++.|..|++
T Consensus 117 P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~~~~-lP~~~~~~v~g~~~~~~~~L~~~~~ 195 (457)
T cd07108 117 PLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLAVLLLAEILAQV-LPAGVLNVITGYGEECGAALVDHPD 195 (457)
T ss_pred cceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHh-CCcCcEEEEeCCchHHHHHHhcCCC
Confidence 999999999999999999999999999999999999999999999999999996 9999999999877778899999999
Q ss_pred cceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHH-HHhccCCcccCCCeEEEeCccHH
Q 014515 160 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA-LFFNQGQCCCAGSRTFVHESVYD 238 (423)
Q Consensus 160 v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~-~~~~~Gq~C~a~~~v~V~~~~~~ 238 (423)
+|.|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|+|++.|++.++++ +|.|+||.|+++++||||++++|
T Consensus 196 vd~v~ftGs~~~g~~v~~~aa~-~l~~~~lelgG~~~~iV~~dAdl~~Aa~~iv~~~~f~~~GQ~C~a~~rv~V~~~i~~ 274 (457)
T cd07108 196 VDKVTFTGSTEVGKIIYRAAAD-RLIPVSLELGGKSPMIVFPDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYD 274 (457)
T ss_pred cCEEEEECcHHHHHHHHHHHhc-cCCeEEEECCCCCeeEECCCCCHHHHHHHHHHhhHhhcCCCCCCCCeEEEEehHHHH
Confidence 9999999999999999999887 789999999999999999999999999999999 49999999999999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHh-CCCEEEeCCcccC----CCCceeecEEEecCCC
Q 014515 239 QFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVD-GGAKLETGGERLG----AKGYYIKPTVFTGVKD 313 (423)
Q Consensus 239 ~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~-~ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~ 313 (423)
+|+++|+++++++++|+|.++++++||++++.++++++++++++++ +|+++++||...+ ..|+|++|||+.++++
T Consensus 275 ~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~~ga~vl~gG~~~~~~~~~~g~~~~Ptvl~~~~~ 354 (457)
T cd07108 275 AFLEKLVAKLSKLKIGDPLDEATDIGAIISEKQFAKVCGYIDLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDN 354 (457)
T ss_pred HHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCCEEEeCCCcCccCCCCCceEECCEEEecCCC
Confidence 9999999999999999999999999999999999999999999998 8999999997642 3589999999999999
Q ss_pred cccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCC
Q 014515 314 DMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQS 393 (423)
Q Consensus 314 ~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~S 393 (423)
++.+++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||+.....+.+||||+|+|
T Consensus 355 ~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLs~~vft~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~pfGG~k~S 434 (457)
T cd07108 355 EWRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVWTRDLGRALRAAHALEAGWVQVNQGGGQQPGQSYGGFKQS 434 (457)
T ss_pred CChhhhcCCCCceEEeecCCCHHHHHHHHhCCCcCceeEEEcCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccC
Confidence 99999999999999999999999999999999999999999999999999999999999999998766778999999999
Q ss_pred CCCCcchHHH-HHhhheeeEEE
Q 014515 394 GQGREKGSYS-LSNYLQVKAVV 414 (423)
Q Consensus 394 G~g~~~g~~~-l~~~~~~k~v~ 414 (423)
|+|+++|.++ +++||+.|+++
T Consensus 435 G~G~~~g~~~~~~~f~~~k~i~ 456 (457)
T cd07108 435 GLGREASLEGMLEHFTQKKTVN 456 (457)
T ss_pred cCCCCccchhHHHHhhceEEEe
Confidence 9999999977 69999999875
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. |
| >PLN02203 aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-85 Score=666.46 Aligned_cols=410 Identities=28% Similarity=0.388 Sum_probs=379.6
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCcc---CCC-CCCCceeE
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT---APA-DGPYHVQT 76 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~---~~~-~~~~~~~~ 76 (423)
+|..+|.++|+++++.|++++++|++++++|+|||+.++...|+..+++.++++++..+...+.. .+. ..+...++
T Consensus 25 ~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (484)
T PLN02203 25 RSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHRVEAYRDEVGVLTKSANLALSNLKKWMAPKKAKLPLVAFPATAEV 104 (484)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcccCCceeEE
Confidence 57899999999999999999999999999999999999865699999999999998776654321 111 12345688
Q ss_pred eeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhc
Q 014515 77 LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALAS 156 (423)
Q Consensus 77 ~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~ 156 (423)
.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++ +|+|++|+++| +.+.+..|..
T Consensus 105 ~reP~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~~-lP~gvv~vv~g-~~~~~~~l~~ 182 (484)
T PLN02203 105 VPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLAANIPKY-LDSKAVKVIEG-GPAVGEQLLQ 182 (484)
T ss_pred EEecccEEEEEcCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHh-CCcCEEEEEeC-CHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999996 99999999998 7788999999
Q ss_pred ccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcC---CCCHHHHHHHHHHHHHh-ccCCcccCCCeEEE
Q 014515 157 HMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE---DADVDKAAELAHYALFF-NQGQCCCAGSRTFV 232 (423)
Q Consensus 157 ~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~---~ad~~~aa~~iv~~~~~-~~Gq~C~a~~~v~V 232 (423)
| .+|.|+||||+++|+.|++.+++ +++|+++|+|||||+||++ |+|++.|++.+++++|. |+||.|++++++||
T Consensus 183 ~-~vd~v~fTGS~~~G~~v~~~aa~-~l~~v~lElGGknp~iV~~d~~daDl~~aa~~i~~~~f~~~aGQ~C~a~~rv~V 260 (484)
T PLN02203 183 H-KWDKIFFTGSPRVGRIIMTAAAK-HLTPVALELGGKCPCIVDSLSSSRDTKVAVNRIVGGKWGSCAGQACIAIDYVLV 260 (484)
T ss_pred C-CCCEEEEECCHHHHHHHHHHHHh-cCCCEEEEecCCCeEEEccCCCCCCHHHHHHHHHHHhcccCCCCccccCCeEEE
Confidence 9 49999999999999999999887 7899999999999999997 69999999999999996 89999999999999
Q ss_pred eCccHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCC
Q 014515 233 HESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVK 312 (423)
Q Consensus 233 ~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~ 312 (423)
|++++|+|+++|++++.++++|+|.++ +++||+++..+++++.+++++++.+ +++++||.. +..|+|++|||+.+++
T Consensus 261 ~~~i~d~f~~~L~~~~~~~~~G~p~~~-~~~Gpli~~~~~~~v~~~i~~a~~~-~~~~~gg~~-~~~g~~i~PTvl~~v~ 337 (484)
T PLN02203 261 EERFAPILIELLKSTIKKFFGENPRES-KSMARILNKKHFQRLSNLLKDPRVA-ASIVHGGSI-DEKKLFIEPTILLNPP 337 (484)
T ss_pred cHHHHHHHHHHHHHHHHHhcCCCCCcC-CCcCCCCCHHHHHHHHHHHHHHHhC-CeEEeCCCc-CCCCCEEeeEEEecCC
Confidence 999999999999999999999999886 6899999999999999999999876 788899875 3468999999999999
Q ss_pred CcccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC--CCCCCCCCCC
Q 014515 313 DDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGY 390 (423)
Q Consensus 313 ~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~pfgG~ 390 (423)
++|.+++||+||||++|++|+|++|||+++|+++|||++||||+|.+++.++++++++|.|+||+... ..+.+||||+
T Consensus 338 ~d~~i~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~G~V~IN~~~~~~~~~~~PfGG~ 417 (484)
T PLN02203 338 LDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRILSETSSGSVTFNDAIIQYACDSLPFGGV 417 (484)
T ss_pred CCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCcccccCCCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999998743 3467899999
Q ss_pred CCCCCCCcchHHHHHhhheeeEEEEec
Q 014515 391 KQSGQGREKGSYSLSNYLQVKAVVTAL 417 (423)
Q Consensus 391 ~~SG~g~~~g~~~l~~~~~~k~v~~~~ 417 (423)
|+||+|+++|.+++++||+.|+|+++.
T Consensus 418 k~SG~Gr~~g~~~l~~ft~~k~v~~~~ 444 (484)
T PLN02203 418 GESGFGRYHGKYSFDTFSHEKAVLRRS 444 (484)
T ss_pred CcccCCccccHHHHHHhcceeEEEEcC
Confidence 999999999999999999999998773
|
|
| >cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-85 Score=663.85 Aligned_cols=408 Identities=38% Similarity=0.601 Sum_probs=380.2
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCC-CCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 79 (423)
+|.++|+++|+++++.|+++.++|++++++|+|||..++.. |+..+++.+++++...++......+.. .+...+.+++
T Consensus 19 ~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~-ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (432)
T cd07105 19 TPPSERRDILLKAADLLESRRDEFIEAMMEETGATAAWAGF-NVDLAAGMLREAASLITQIIGGSIPSDKPGTLAMVVKE 97 (432)
T ss_pred CCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCeecccCCCCceeEEEEe
Confidence 57899999999999999999999999999999999877764 999999999999988766544333322 3445688999
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCC---chhHHHHhhc
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY---GPTAGAALAS 156 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~---~~~~~~~l~~ 156 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++++ +.++++.|+.
T Consensus 98 P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~~~~l~~ 177 (432)
T cd07105 98 PVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKGVLNVVTHSPEDAPEVVEALIA 177 (432)
T ss_pred cceEEEEECCcCcHHHHHHHHHHHHHhcCCEEEEECCccChHHHHHHHHHHHHcCcCCCcEEEEeCCCCchHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999999999999999974 3457899999
Q ss_pred ccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCcc
Q 014515 157 HMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 236 (423)
Q Consensus 157 ~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~ 236 (423)
||++|.|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|+|++.|++.+++++|.|+||.|+++++||||+++
T Consensus 178 ~~~v~~v~ftGs~~~g~~i~~~aa~-~~~~~~lElgGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i 256 (432)
T cd07105 178 HPAVRKVNFTGSTRVGRIIAETAAK-HLKPVLLELGGKAPAIVLEDADLDAAANAALFGAFLNSGQICMSTERIIVHESI 256 (432)
T ss_pred CCCCCEEEEECCHHHHHHHHHHHHh-cCCeEEEeCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCcCCceEEEcHHH
Confidence 9999999999999999999999887 889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC-CCCceeecEEEecCCCcc
Q 014515 237 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-AKGYYIKPTVFTGVKDDM 315 (423)
Q Consensus 237 ~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~-~~g~~~~Ptvl~~~~~~~ 315 (423)
+|+|+++|++++.++++| ++++||++++.+++++++++++++++|+++++||.... ..|+|++|||+.++++++
T Consensus 257 ~~~f~~~l~~~~~~~~~g-----~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~~~~~~~Ptvl~~~~~~~ 331 (432)
T cd07105 257 ADEFVEKLKAAAEKLFAG-----PVVLGSLVSAAAADRVKELVDDALSKGAKLVVGGLADESPSGTSMPPTILDNVTPDM 331 (432)
T ss_pred HHHHHHHHHHHHHhhcCC-----CCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCeEEeeEEEecCCCCC
Confidence 999999999999999988 67999999999999999999999999999999997642 358999999999999999
Q ss_pred cccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC-CCCCCCCCCCCCC
Q 014515 316 LIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSG 394 (423)
Q Consensus 316 ~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~pfgG~~~SG 394 (423)
.+++||+||||++|++|+|.|||++++|+++|||++||||+|.++++++++++++|.|+||+++.. .+.+||||+|.||
T Consensus 332 ~~~~eE~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~~PfgG~~~SG 411 (432)
T cd07105 332 DIYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVAKRIESGAVHINGMTVHDEPTLPHGGVKSSG 411 (432)
T ss_pred HHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCccccc
Confidence 999999999999999999999999999999999999999999999999999999999999987654 4789999999999
Q ss_pred CCCcchHHHHHhhheeeEEEE
Q 014515 395 QGREKGSYSLSNYLQVKAVVT 415 (423)
Q Consensus 395 ~g~~~g~~~l~~~~~~k~v~~ 415 (423)
+|+++|.+++++|++.|+|++
T Consensus 412 ~G~~~g~~~l~~~~~~k~v~~ 432 (432)
T cd07105 412 YGRFNGKWGIDEFTETKWITI 432 (432)
T ss_pred ccccChHHHHHHhhceEEEeC
Confidence 999999999999999999853
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. |
| >cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-85 Score=668.29 Aligned_cols=412 Identities=46% Similarity=0.726 Sum_probs=390.4
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCC-CCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..+++. |+..+++.+++++...+...+...+.. .+...+.+++
T Consensus 38 ~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (451)
T cd07103 38 TTARERAAILRRWADLIRERAEDLARLLTLEQGKPLAEARG-EVDYAASFLEWFAEEARRIYGRTIPSPAPGKRILVIKQ 116 (451)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCcceEEEEe
Confidence 57899999999999999999999999999999999999875 999999999999887766655444322 3556789999
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccC
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 159 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~ 159 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|+++++++++.+.++.|+.|++
T Consensus 117 P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~ 196 (451)
T cd07103 117 PVGVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETPLSALALAELAEEAGLPAGVLNVVTGSPAEIGEALCASPR 196 (451)
T ss_pred eceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHcCCCcccEEEEecCchhHHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999877778899999999
Q ss_pred cceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHH
Q 014515 160 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239 (423)
Q Consensus 160 v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~ 239 (423)
+|.|+||||+.+|+.|.+.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+
T Consensus 197 vd~V~ftGs~~~g~~v~~~aa~-~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~ 275 (451)
T cd07103 197 VRKISFTGSTAVGKLLMAQAAD-TVKRVSLELGGNAPFIVFDDADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDE 275 (451)
T ss_pred CCEEEEECCHHHHHHHHHHHHh-cCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeeEEEcHHHHHH
Confidence 9999999999999999999887 789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCcccccc
Q 014515 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAK 319 (423)
Q Consensus 240 f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~ 319 (423)
|+++|+++++++++|+|.++++++||+++..+++++.+++++++.+|+++++||......|+|++|||+.++++++.+++
T Consensus 276 f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~l~gg~~~~~~g~~~~Ptil~~~~~~~~~~~ 355 (451)
T cd07103 276 FVEKLVERVKKLKVGNGLDEGTDMGPLINERAVEKVEALVEDAVAKGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIMN 355 (451)
T ss_pred HHHHHHHHHHhccCCCCCCCCCCCCcCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCcEECCEEeeCCCCcCHHHh
Confidence 99999999999999999999999999999999999999999999999999999976544689999999999999999999
Q ss_pred cccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCCCcc
Q 014515 320 DEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREK 399 (423)
Q Consensus 320 ~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~ 399 (423)
+|+||||++|++|+|++||++++|++++||++||||+|.+.++++++++++|.|+||+++...+..||||+|.||+|+++
T Consensus 356 ~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~SG~G~~~ 435 (451)
T cd07103 356 EETFGPVAPIIPFDTEDEVIARANDTPYGLAAYVFTRDLARAWRVAEALEAGMVGINTGLISDAEAPFGGVKESGLGREG 435 (451)
T ss_pred CCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCccCcCCccc
Confidence 99999999999999999999999999999999999999999999999999999999998777788999999999999999
Q ss_pred hHHHHHhhheeeEEE
Q 014515 400 GSYSLSNYLQVKAVV 414 (423)
Q Consensus 400 g~~~l~~~~~~k~v~ 414 (423)
|++++++||+.|++.
T Consensus 436 g~~~~~~~~~~k~v~ 450 (451)
T cd07103 436 GKEGLEEYLETKYVS 450 (451)
T ss_pred hHHHHHHHhceeEEe
Confidence 999999999999875
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. |
| >cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-85 Score=668.26 Aligned_cols=413 Identities=46% Similarity=0.823 Sum_probs=390.4
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
+|.++|.++|+++++.|++++++|++++++|+|||..++...|+..+++.+++++....+..+...+...+...+.+++|
T Consensus 38 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 117 (455)
T cd07093 38 MSPAERARILHKVADLIEARADELALLESLDTGKPITLARTRDIPRAAANFRFFADYILQLDGESYPQDGGALNYVLRQP 117 (455)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhHHHhCCccccCCCCceEEEEEEe
Confidence 57899999999999999999999999999999999988876799999999999988776654444443345667889999
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 160 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v 160 (423)
+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+|+++++++.+.+..|+.|+++
T Consensus 118 ~GVv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlkps~~~p~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~L~~~~~i 197 (455)
T cd07093 118 VGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLTAWLLAELANEAGLPPGVVNVVHGFGPEAGAALVAHPDV 197 (455)
T ss_pred eeEEEEECCCChHHHHHHHHHHHHHhcCCEEEeECCCcCcHHHHHHHHHHHhcCCCccceEEEecCchHHHHHHhcCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999998777889999999999
Q ss_pred ceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHHH
Q 014515 161 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240 (423)
Q Consensus 161 ~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~f 240 (423)
+.|+||||+.+|+.|.+.+++ +++|+++|+||+||+||++|+|++.|++.+++++|.++||.|+++++||||++++|+|
T Consensus 198 ~~V~ftGs~~~g~~v~~~aa~-~~~~~~lelgG~~~~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f 276 (455)
T cd07093 198 DLISFTGETATGRTIMRAAAP-NLKPVSLELGGKNPNIVFADADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEF 276 (455)
T ss_pred cEEEEECCHHHHHHHHHHHhh-cccceEeecCCCCceEECCCCCHHHHHHHHHHHHHhccCCCcCCCceEEEcHHHHHHH
Confidence 999999999999999999887 7899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC----CCCceeecEEEecCCCccc
Q 014515 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDML 316 (423)
Q Consensus 241 ~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~ 316 (423)
+++|+++++++++|+|.|+++++||++++.+++++.+++++++.+|+++++||...+ ..|.|+.|||+.+++++++
T Consensus 277 ~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~~~Ptvl~~~~~~~~ 356 (455)
T cd07093 277 LERFVERAKALKVGDPLDPDTEVGPLISKEHLEKVLGYVELARAEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSR 356 (455)
T ss_pred HHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEecCCCCCh
Confidence 999999999999999999999999999999999999999999999999999997643 3588999999999999999
Q ss_pred ccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCC
Q 014515 317 IAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQG 396 (423)
Q Consensus 317 ~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g 396 (423)
+++||+||||++|++|+|.+|||+++|+.++||++||||+|.++++++++++++|+|+||+.....+.+||||+|.||+|
T Consensus 357 ~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gls~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~G 436 (455)
T cd07093 357 VAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTRDLGRAHRVARRLEAGTVWVNCWLVRDLRTPFGGVKASGIG 436 (455)
T ss_pred HHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCccCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999998777778999999999999
Q ss_pred CcchHHHHHhhheeeEEE
Q 014515 397 REKGSYSLSNYLQVKAVV 414 (423)
Q Consensus 397 ~~~g~~~l~~~~~~k~v~ 414 (423)
+++|.+|+++|++.|+++
T Consensus 437 ~~~g~~~~~~~~~~k~~~ 454 (455)
T cd07093 437 REGGDYSLEFYTELKNVC 454 (455)
T ss_pred CCchHHHHHHHhceeEEe
Confidence 999999999999999875
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. |
| >cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-85 Score=660.69 Aligned_cols=407 Identities=31% Similarity=0.451 Sum_probs=376.2
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCcc---CCC-CCCCceeE
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT---APA-DGPYHVQT 76 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~---~~~-~~~~~~~~ 76 (423)
+|.++|+++|+++++.|++++++|++++++|+|||+.++...|+..+++.+++++....+..... .+. ......++
T Consensus 18 ~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (432)
T cd07137 18 RSAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPSAESFRDEVSVLVSSCKLAIKELKKWMAPEKVKTPLTTFPAKAEI 97 (432)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccCCCcccCCceeEE
Confidence 57899999999999999999999999999999999988865699999999999998775544321 111 12235678
Q ss_pred eeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhc
Q 014515 77 LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALAS 156 (423)
Q Consensus 77 ~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~ 156 (423)
.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++ +|+|++|+++| +.+.++.|+.
T Consensus 98 ~r~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~~-~P~gvv~~v~g-~~~~~~~L~~ 175 (432)
T cd07137 98 VSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKLIPEY-LDTKAIKVIEG-GVPETTALLE 175 (432)
T ss_pred EEecCcEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcChHHHHHHHHHHHHh-CCcCeEEEEeC-CHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999995 99999999998 5667888888
Q ss_pred ccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHH-hccCCcccCCCeEEEeCc
Q 014515 157 HMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF-FNQGQCCCAGSRTFVHES 235 (423)
Q Consensus 157 ~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~-~~~Gq~C~a~~~v~V~~~ 235 (423)
| +++.|.||||+.+|+.|.+.++. +++|+++|+|||||+||++|||++.|++.+++++| +|+||.|++++++|||++
T Consensus 176 ~-~i~~v~fTGs~~~g~~v~~~aa~-~~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~f~~~~GQ~C~a~~rv~V~~~ 253 (432)
T cd07137 176 Q-KWDKIFFTGSPRVGRIIMAAAAK-HLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKWGCNNGQACIAPDYVLVEES 253 (432)
T ss_pred C-CCCEEEEECChHHHHHHHHHHHh-cCCcEEEEccCCCcEEEcCCCCHHHHHHHHHHHhhhccCCCcccCCCEEEEcHH
Confidence 7 69999999999999999999887 78999999999999999999999999999999999 599999999999999999
Q ss_pred cHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCcc
Q 014515 236 VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDM 315 (423)
Q Consensus 236 ~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~ 315 (423)
++|+|+++|.+++.+++.|+| ++++++||++++.+++++.+++++++. |+++++||.. +..|+|++|||+.++++++
T Consensus 254 i~d~f~~~l~~~~~~~~~g~p-~~~~~~gpli~~~~~~~v~~~i~~a~~-ga~~l~gg~~-~~~g~~~~Ptvl~~~~~~~ 330 (432)
T cd07137 254 FAPTLIDALKNTLEKFFGENP-KESKDLSRIVNSHHFQRLSRLLDDPSV-ADKIVHGGER-DEKNLYIEPTILLDPPLDS 330 (432)
T ss_pred HHHHHHHHHHHHHHHHhCCCC-CccCCcCCcCCHHHHHHHHHHHHHHHh-CCeEEeCCCc-CCCCCEEeeEEEecCCCcc
Confidence 999999999999999999999 568899999999999999999999988 8999999975 3368999999999999999
Q ss_pred cccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC--CCCCCCCCCCCCC
Q 014515 316 LIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQS 393 (423)
Q Consensus 316 ~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~pfgG~~~S 393 (423)
++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||+... ..+.+||||+|.|
T Consensus 331 ~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~S 410 (432)
T cd07137 331 SIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAETSSGGVTFNDTVVQYAIDTLPFGGVGES 410 (432)
T ss_pred hhhhcccccCceEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcCcEEECCccccccCCCCCCCCcCcC
Confidence 99999999999999999999999999999999999999999999999999999999999998654 3477899999999
Q ss_pred CCCCcchHHHHHhhheeeEEE
Q 014515 394 GQGREKGSYSLSNYLQVKAVV 414 (423)
Q Consensus 394 G~g~~~g~~~l~~~~~~k~v~ 414 (423)
|+|+++|.+++++|++.|+++
T Consensus 411 G~G~~~g~~~l~~f~~~k~v~ 431 (432)
T cd07137 411 GFGAYHGKFSFDAFSHKKAVL 431 (432)
T ss_pred cCCccccHHHHHHhccCceee
Confidence 999999999999999999875
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. |
| >TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-85 Score=667.21 Aligned_cols=412 Identities=31% Similarity=0.459 Sum_probs=384.2
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCC-CCCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|++++++|+++++.|+|||+.++.. |+..+++.+++++.......+...+. ..+...+.+++
T Consensus 57 ~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-ev~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 135 (477)
T TIGR01722 57 TSLAQRTSVLLRYQALLKEHRDEIAELITAEHGKTHSDALG-DVARGLEVVEHACGVNSLLKGETSTQVATRVDVYSIRQ 135 (477)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEc
Confidence 57899999999999999999999999999999999999874 99999999999988776665544332 12345678899
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccC
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 159 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~ 159 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++ +.+.+..|+.||+
T Consensus 136 P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~l~~aglP~g~~~~v~g-~~~~~~~L~~~~~ 214 (477)
T TIGR01722 136 PLGVCAGITPFNFPAMIPLWMFPIAIACGNTFVLKPSEKVPSAAVKLAELFSEAGAPDGVLNVVHG-DKEAVDRLLEHPD 214 (477)
T ss_pred ccceEEEEccCChHHHHHHHHHHHHHhcCCEEEeeCcccChHHHHHHHHHHHHhCcCCCeEEEEeC-CHHHHHHHHcCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999998 4566889999999
Q ss_pred cceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHH
Q 014515 160 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239 (423)
Q Consensus 160 v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~ 239 (423)
++.|+||||+.+|+.|.+.++. .+||+++|+||+||+||++|||++.|++.+++++|.|+||.|+++++||||+++ ++
T Consensus 215 v~~V~ftGS~~~g~~v~~~a~~-~~~~v~lElGG~n~~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~rl~v~~~~-~~ 292 (477)
T TIGR01722 215 VKAVSFVGSTPIGRYIHTTGSA-HGKRVQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAAVLVGAA-DE 292 (477)
T ss_pred cCEEEEECCHHHHHHHHHHHHh-cCCeEEEECCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeCcH-HH
Confidence 9999999999999999998877 789999999999999999999999999999999999999999999999999999 99
Q ss_pred HHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccc--C--CCCceeecEEEecCCCcc
Q 014515 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL--G--AKGYYIKPTVFTGVKDDM 315 (423)
Q Consensus 240 f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~--~--~~g~~~~Ptvl~~~~~~~ 315 (423)
|+++|+++++++++|+|.++++++||+++..+++++.+++++++++|+++++||... + .+|+|++|||+.++++++
T Consensus 293 f~~~l~~~~~~~~~G~~~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~il~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~ 372 (477)
T TIGR01722 293 WVPEIRERAEKIRIGPGDDPGAEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTM 372 (477)
T ss_pred HHHHHHHHHhcCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeEECCEEeeCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999752 1 358999999999999999
Q ss_pred cccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC-CCCCCCCCCCCCCC
Q 014515 316 LIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV-FDAAIPFGGYKQSG 394 (423)
Q Consensus 316 ~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~pfgG~~~SG 394 (423)
.++++|+||||++|++|+|++|||+++|+++|||++||||+|.++++++++++++|.|+||+... ..+.+||||+|.||
T Consensus 373 ~~~~eE~FgPvl~V~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG 452 (477)
T TIGR01722 373 KAYQEEIFGPVLCVLEADTLEEAIALINASPYGNGTAIFTRDGAAARRFQHEIEVGQVGVNVPIPVPLPYFSFTGWKDSF 452 (477)
T ss_pred hhhhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCCCcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999998543 34678999999999
Q ss_pred CC--CcchHHHHHhhheeeEEEEe
Q 014515 395 QG--REKGSYSLSNYLQVKAVVTA 416 (423)
Q Consensus 395 ~g--~~~g~~~l~~~~~~k~v~~~ 416 (423)
+| +++|.+++++||+.|++++.
T Consensus 453 ~G~~~~~g~~~l~~~~~~k~i~~~ 476 (477)
T TIGR01722 453 FGDHHIYGKQGTHFYTRGKTVTTR 476 (477)
T ss_pred CCCCccChHHHHHHhcCeeEEEEe
Confidence 99 57899999999999999876
|
In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus. |
| >cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-85 Score=660.21 Aligned_cols=405 Identities=31% Similarity=0.466 Sum_probs=375.7
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCc-cCCCC---CCCceeE
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL-TAPAD---GPYHVQT 76 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~-~~~~~---~~~~~~~ 76 (423)
+|..+|+++|+++++.|+++.++|++++++|+|||+.++...|+..+++.+++++..++...+. ..+.. .+...+.
T Consensus 17 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (449)
T cd07136 17 KDVEFRIEQLKKLKQAIKKYENEILEALKKDLGKSEFEAYMTEIGFVLSEINYAIKHLKKWMKPKRVKTPLLNFPSKSYI 96 (449)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccCCccccCCceeEE
Confidence 5789999999999999999999999999999999999987669999999999999877665433 12211 2445788
Q ss_pred eeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhc
Q 014515 77 LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALAS 156 (423)
Q Consensus 77 ~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~ 156 (423)
.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++ +|+|++++++| +.+.+..|+.
T Consensus 97 ~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vi~Kps~~tp~~~~~l~~~~~~a-lP~gv~~~v~g-~~~~~~~L~~ 174 (449)
T cd07136 97 YYEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKIIEET-FDEEYVAVVEG-GVEENQELLD 174 (449)
T ss_pred EEecCeEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECcccchHHHHHHHHHHHHh-CCCCEEEEEeC-ChHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999998 99999999998 5567888887
Q ss_pred ccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCcc
Q 014515 157 HMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 236 (423)
Q Consensus 157 ~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~ 236 (423)
|+ +|.|.||||+++|+.|++.++. .++|+++|+||+||+||++|+|+|.|++.+++++|.|+||.|++++++|||+++
T Consensus 175 ~~-v~~V~fTGS~~~g~~i~~~aa~-~~~~v~lElgGknp~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i 252 (449)
T cd07136 175 QK-FDYIFFTGSVRVGKIVMEAAAK-HLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKFLNAGQTCVAPDYVLVHESV 252 (449)
T ss_pred CC-CCEEEEECCHHHHHHHHHHHHh-cCCCEEEEecCCCeEEECCCCCHHHHHHHHHHHHHcccCCcccCCCEEEEcHHH
Confidence 65 9999999999999999999887 789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCccc
Q 014515 237 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDML 316 (423)
Q Consensus 237 ~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~ 316 (423)
+|+|+++|++++++++.|+|.+ ++++||++++.+++++.++++++ ++++||... ..|+|+.|||+.++++++.
T Consensus 253 ~d~f~~~L~~~~~~~~~g~p~~-~~~~gpli~~~~~~~i~~~i~~a-----~~~~gG~~~-~~g~~~~Ptvl~~v~~~~~ 325 (449)
T cd07136 253 KEKFIKELKEEIKKFYGEDPLE-SPDYGRIINEKHFDRLAGLLDNG-----KIVFGGNTD-RETLYIEPTILDNVTWDDP 325 (449)
T ss_pred HHHHHHHHHHHHHHhcCCCCCC-CCCccCcCCHHHHHHHHHHHhcc-----eEEECCCcC-CCCCEEeeEEEecCCCcCh
Confidence 9999999999999999999998 88999999999999999999863 899999753 3689999999999999999
Q ss_pred ccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC--CCCCCCCCCCCCCC
Q 014515 317 IAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSG 394 (423)
Q Consensus 317 ~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~pfgG~~~SG 394 (423)
+++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|.|+||+... ..+.+||||+|.||
T Consensus 326 ~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~~PfGG~k~SG 405 (449)
T cd07136 326 VMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEKKVLENLSFGGGCINDTIMHLANPYLPFGGVGNSG 405 (449)
T ss_pred HHhccccCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCccccccCCCCCccCcCccc
Confidence 9999999999999999999999999999999999999999999999999999999999998654 34778999999999
Q ss_pred CCCcchHHHHHhhheeeEEEEe
Q 014515 395 QGREKGSYSLSNYLQVKAVVTA 416 (423)
Q Consensus 395 ~g~~~g~~~l~~~~~~k~v~~~ 416 (423)
+|+++|.+++++||+.|+|+++
T Consensus 406 ~G~~~g~~~l~~~t~~k~v~~~ 427 (449)
T cd07136 406 MGSYHGKYSFDTFSHKKSILKK 427 (449)
T ss_pred CCcccCHHHHHHhccceEEEEc
Confidence 9999999999999999999876
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. |
| >cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-85 Score=660.47 Aligned_cols=404 Identities=31% Similarity=0.418 Sum_probs=375.2
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCC-----CCCcee
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-----GPYHVQ 75 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~ 75 (423)
+|.++|+++|+++++.|++++++|++++++|+|||+.++...|+..+++.+++++..+++......... .+...+
T Consensus 24 ~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (436)
T cd07135 24 KDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFETLLTEVSGVKNDILHMLKNLKKWAKDEKVKDGPLAFMFGKPR 103 (436)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCcccCCcccccCCCceE
Confidence 578999999999999999999999999999999999988656999999999999987766543222111 134578
Q ss_pred EeeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhh
Q 014515 76 TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 155 (423)
Q Consensus 76 ~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~ 155 (423)
..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.+ |+|+|+++++++.+.+. ..|+
T Consensus 104 ~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~~l~~~-~lP~g~v~vv~g~~~~~-~~l~ 181 (436)
T cd07135 104 IRKEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVPK-YLDPDAFQVVQGGVPET-TALL 181 (436)
T ss_pred EEeccCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHH-hCCcCEEEEEcCCchhH-HHHH
Confidence 899999999999999999999999999999999999999999999999999999999 69999999999865555 4588
Q ss_pred cccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCc
Q 014515 156 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES 235 (423)
Q Consensus 156 ~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~ 235 (423)
.|+ +|.|.||||+.+|+.|++.++. +++|+++|+|||||+||++|+|++.|++.+++++|.++||.|+++++||||++
T Consensus 182 ~~~-vd~v~ftGs~~~g~~i~~~aa~-~~~~~~lelgG~~~~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~ 259 (436)
T cd07135 182 EQK-FDKIFYTGSGRVGRIIAEAAAK-HLTPVTLELGGKSPVIVTKNADLELAAKRILWGKFGNAGQICVAPDYVLVDPS 259 (436)
T ss_pred hCC-CCEEEEECCcHHHHHHHHHHHh-cCCCeEEEccCCCcEEECCCCCHHHHHHHHHHHHhccCCceecCCCEEeccHH
Confidence 899 9999999999999999998887 78999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCcc
Q 014515 236 VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDM 315 (423)
Q Consensus 236 ~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~ 315 (423)
++|+|+++|+++++++++|+| ++++++||+++..+++++.++++++ |+++++||... ..|+|++|||+.++++++
T Consensus 260 i~d~f~~~l~~~~~~~~~g~p-~~~~~~gpli~~~~~~~i~~~v~~a---g~~v~~gg~~~-~~g~~~~Ptvl~~~~~~~ 334 (436)
T cd07135 260 VYDEFVEELKKVLDEFYPGGA-NASPDYTRIVNPRHFNRLKSLLDTT---KGKVVIGGEMD-EATRFIPPTIVSDVSWDD 334 (436)
T ss_pred HHHHHHHHHHHHHHHhcCCCC-CCCCCcCCCCCHHHHHHHHHHHHhc---CCeEEECCCcC-CCCCEEccEEEecCCCcc
Confidence 999999999999999999999 9999999999999999999999986 78999999764 368999999999999999
Q ss_pred cccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC--CCCCCCCCCCCCC
Q 014515 316 LIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQS 393 (423)
Q Consensus 316 ~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~pfgG~~~S 393 (423)
.++++|+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||+.+. ..+.+||||+|.|
T Consensus 335 ~~~~~E~FgPvl~v~~~~~~deai~~an~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~S 414 (436)
T cd07135 335 SLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTRSGGVVINDTLIHVGVDNAPFGGVGDS 414 (436)
T ss_pred HHHhccccCCceEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhcCCcCeEEECCccccccCCCCCcCCcCcc
Confidence 99999999999999999999999999999999999999999999999999999999999998653 3578999999999
Q ss_pred CCCCcchHHHHHhhheeeEE
Q 014515 394 GQGREKGSYSLSNYLQVKAV 413 (423)
Q Consensus 394 G~g~~~g~~~l~~~~~~k~v 413 (423)
|+|+++|.+|+++||+.|+|
T Consensus 415 G~G~~~g~~~l~~~t~~k~i 434 (436)
T cd07135 415 GYGAYHGKYGFDTFTHERTV 434 (436)
T ss_pred cCCccccHhHHHHhcccccc
Confidence 99999999999999999986
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. |
| >cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-85 Score=664.54 Aligned_cols=414 Identities=33% Similarity=0.548 Sum_probs=382.3
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCc-cCCCC---CCCceeE
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL-TAPAD---GPYHVQT 76 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~-~~~~~---~~~~~~~ 76 (423)
+|.++|.++|+++++.|.+++++|++++++|+|||+.++...|+..+++.+++++...+..... ..+.. .+...++
T Consensus 37 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (465)
T cd07098 37 TSFAERRKVLRSLLKYILENQEEICRVACRDTGKTMVDASLGEILVTCEKIRWTLKHGEKALRPESRPGGLLMFYKRARV 116 (465)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccCCccccCCceeEE
Confidence 5789999999999999999999999999999999999987679999999999998776553322 22211 1334678
Q ss_pred eeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHH----HHHcCCCCCcEEEEeCCchhHHH
Q 014515 77 LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKL----LHEAGLPPGVLNIVSGYGPTAGA 152 (423)
Q Consensus 77 ~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~----l~~ag~P~g~v~~v~~~~~~~~~ 152 (423)
.++|+|||++|+|||||+...+.++++||++||+||+|||+.+|.++..+.++ |.++|+|+|++|++++++ +.++
T Consensus 117 ~~~P~GVv~~I~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~~~~~~~~~l~~aGlP~gvv~~v~g~~-~~~~ 195 (465)
T cd07098 117 EYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVAWSSGFFLSIIRECLAACGHDPDLVQLVTCLP-ETAE 195 (465)
T ss_pred EEecceeEEEEcccCcHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHHHHhcCCCCCeEEEEECCH-HHHH
Confidence 89999999999999999999999999999999999999999999999876655 468899999999999955 7899
Q ss_pred HhhcccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEE
Q 014515 153 ALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFV 232 (423)
Q Consensus 153 ~l~~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V 232 (423)
.|+.||+|+.|.||||+.+|+.|.+.++. +++|+++|+|||||+||++|+|++.|++.+++++|.++||.|+++++|||
T Consensus 196 ~L~~~~~v~~V~ftGs~~~g~~v~~~a~~-~~~~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V 274 (465)
T cd07098 196 ALTSHPVIDHITFIGSPPVGKKVMAAAAE-SLTPVVLELGGKDPAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIV 274 (465)
T ss_pred HHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEE
Confidence 99999999999999999999999999887 78999999999999999999999999999999999999999999999999
Q ss_pred eCccHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC----CCCceeecEEE
Q 014515 233 HESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVF 308 (423)
Q Consensus 233 ~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~----~~g~~~~Ptvl 308 (423)
|++++|+|+++|++++..+++|+|.++++++||++++.+++++.+++++++.+|+++++||.... ..|+|++|||+
T Consensus 275 ~~~i~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl 354 (465)
T cd07098 275 HEKIYDKLLEILTDRVQALRQGPPLDGDVDVGAMISPARFDRLEELVADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLL 354 (465)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCcCcCCCCcEEcCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999986532 25899999999
Q ss_pred ecCCCcccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC--CCCCCC
Q 014515 309 TGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIP 386 (423)
Q Consensus 309 ~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~p 386 (423)
.++++++.++++|+||||++|++|+|+|||++++|+++|||++||||+|.++++++++++++|.|+||..+. ..+..|
T Consensus 355 ~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~P 434 (465)
T cd07098 355 VDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLGASVFGKDIKRARRIASQLETGMVAINDFGVNYYVQQLP 434 (465)
T ss_pred eCCCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999998653 346899
Q ss_pred CCCCCCCCCCCcchHHHHHhhheeeEEEEe
Q 014515 387 FGGYKQSGQGREKGSYSLSNYLQVKAVVTA 416 (423)
Q Consensus 387 fgG~~~SG~g~~~g~~~l~~~~~~k~v~~~ 416 (423)
|||+|.||+|+++|.+++++|++.|+++++
T Consensus 435 fgG~k~SG~G~~~g~~~~~~~~~~k~~~~~ 464 (465)
T cd07098 435 FGGVKGSGFGRFAGEEGLRGLCNPKSVTED 464 (465)
T ss_pred cCccccccCCccChHHHHHHhheeEEEEEe
Confidence 999999999999999999999999999764
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. |
| >TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-84 Score=664.16 Aligned_cols=413 Identities=30% Similarity=0.430 Sum_probs=379.7
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
+|.++|.++|+++++.|++++++|++++++|+|||..++.. |+..+++.+++++.......+.......+...+..++|
T Consensus 54 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P 132 (484)
T TIGR03240 54 LSLEERIAVVQRFAALLEERKEALARVIARETGKPLWETRT-EVASMIGKVAISIKAYHERTGESENPMPDGRAVLRHRP 132 (484)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEEec
Confidence 57899999999999999999999999999999999999874 99999999998887665554433221223346788999
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 160 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v 160 (423)
+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++ +.+.++.|+.||++
T Consensus 133 ~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~t~~~l~~~~~~aGlP~gvv~~v~g-~~~~~~~L~~~~~v 211 (484)
T TIGR03240 133 HGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAEETVKLWEKAGLPAGVLNLVQG-ARETGVALAAHPDI 211 (484)
T ss_pred ccEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccccHHHHHHHHHHHHhCcCcccEEEEeC-CHHHHHHHhcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999998 56788999999999
Q ss_pred ceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccH-HH
Q 014515 161 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY-DQ 239 (423)
Q Consensus 161 ~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~-~~ 239 (423)
|.|+||||+++|+.|++.++....+++++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++ |+
T Consensus 212 d~V~fTGS~~~G~~i~~~aa~~~~~~~~lElGGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~~~d~ 291 (484)
T TIGR03240 212 DGLLFTGSSNTGHLLHRQFAGRPEKILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDA 291 (484)
T ss_pred CEEEEECCHHHHHHHHHHhhhcCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeccccHHH
Confidence 99999999999999999877644688999999999999999999999999999999999999999999999999985 99
Q ss_pred HHHHHHHHHhhcccCCC-CCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCccccc
Q 014515 240 FVEKANALAMKRVVGDP-FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIA 318 (423)
Q Consensus 240 f~~~l~~~~~~~~~g~p-~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~ 318 (423)
|+++|.++++++++|+| .++++++||+++..+++++.+++++++++|+++++||...+..+.|++|||+ .+++++.++
T Consensus 292 f~~~l~~~~~~~~~g~~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~i~PTvl-~v~~~~~i~ 370 (484)
T TIGR03240 292 FLARLVEVAERLTVGAWDAEPQPFMGAVISLQAAQRLLAAQAKLLALGGKSLLAMRQLDPGAALLTPGII-DVTGVAELP 370 (484)
T ss_pred HHHHHHHHHHhcccCCCCcCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCEEEcCEEE-ccCCCCHHH
Confidence 99999999999999997 5788999999999999999999999999999999988754446789999999 588899999
Q ss_pred ccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC-CCCCCCCCCCCCCCCCC
Q 014515 319 KDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV-FDAAIPFGGYKQSGQGR 397 (423)
Q Consensus 319 ~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~pfgG~~~SG~g~ 397 (423)
++|+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||+... ..+.+||||+|.||+|+
T Consensus 371 ~eE~FGPVl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~pfGG~~~SG~g~ 450 (484)
T TIGR03240 371 DEEHFGPLLQVIRYDDFDEAIAIANNTRFGLSAGLLSDDRELYDRFLLEIRAGIVNWNKPLTGASSAAPFGGIGASGNHR 450 (484)
T ss_pred hCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCcCCcccccCCC
Confidence 99999999999999999999999999999999999999999999999999999999997654 34678999999999999
Q ss_pred cchHHHHHhhheeeEEEEec
Q 014515 398 EKGSYSLSNYLQVKAVVTAL 417 (423)
Q Consensus 398 ~~g~~~l~~~~~~k~v~~~~ 417 (423)
++|.++++ |++.|++++++
T Consensus 451 ~~g~~~~~-~~~~~~~~~~~ 469 (484)
T TIGR03240 451 PSAYYAAD-YCAYPVASLEA 469 (484)
T ss_pred CCchHHHh-heeeeEEEEec
Confidence 99977766 99999999885
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism. |
| >PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-84 Score=665.03 Aligned_cols=409 Identities=33% Similarity=0.463 Sum_probs=379.2
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCc--cC-----CCC-CCC
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL--TA-----PAD-GPY 72 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~--~~-----~~~-~~~ 72 (423)
++..+|.++|+++++.|++++++|++++++|+|||..++.. |+..+++.+++++..+.+.... .. +.. .+.
T Consensus 72 ~~~~~R~~iL~~~a~~l~~~~~el~~~~~~e~Gk~~~~a~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (496)
T PLN00412 72 TPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVT-EVVRSGDLISYTAEEGVRILGEGKFLVSDSFPGNERNK 150 (496)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccccccCCCccCCc
Confidence 47899999999999999999999999999999999999874 9999999999998766554321 11 111 122
Q ss_pred ceeEeeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHH
Q 014515 73 HVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGA 152 (423)
Q Consensus 73 ~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~ 152 (423)
..+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|++++++.+.+.
T Consensus 151 ~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VIlKPs~~t~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~ 230 (496)
T PLN00412 151 YCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGD 230 (496)
T ss_pred eeEEEEecceEEEEECCCCchHHHHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHhCCCcccEEEEecCchHHHH
Confidence 45688999999999999999999999999999999999999999999999999999999999999999999987777899
Q ss_pred HhhcccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEE
Q 014515 153 ALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFV 232 (423)
Q Consensus 153 ~l~~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V 232 (423)
.|..||+++.|.|||| .+|+.|++.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++|||
T Consensus 231 ~l~~~~~v~~V~ftGs-~~g~~v~~~a~---~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V 306 (496)
T PLN00412 231 FLTMHPGVNCISFTGG-DTGIAISKKAG---MVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLV 306 (496)
T ss_pred HHhcCCCcCEEEEeCh-HHHHHHHHHhC---CCcEEEEcCCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEE
Confidence 9999999999999999 99999998764 6899999999999999999999999999999999999999999999999
Q ss_pred eCccHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCC
Q 014515 233 HESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVK 312 (423)
Q Consensus 233 ~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~ 312 (423)
|++++|+|+++|+++++++++|+|.+ ++++||+++..+++++.+++++++.+|++++++|.. .|+|+.|||+.+++
T Consensus 307 ~~~i~d~f~~~l~~~~~~~~~g~p~~-~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~~~~~---~g~~~~Ptvl~~v~ 382 (496)
T PLN00412 307 MESVADALVEKVNAKVAKLTVGPPED-DCDITPVVSESSANFIEGLVMDAKEKGATFCQEWKR---EGNLIWPLLLDNVR 382 (496)
T ss_pred cHHHHHHHHHHHHHHHHhCccCCCcc-cCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCeEEecEEEeCCC
Confidence 99999999999999999999999987 789999999999999999999999999999987753 58999999999999
Q ss_pred CcccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC-CCCCCCCCCCC
Q 014515 313 DDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV-FDAAIPFGGYK 391 (423)
Q Consensus 313 ~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~pfgG~~ 391 (423)
+++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||++.. ..+.+||||+|
T Consensus 383 ~~~~i~~eE~FgPvl~v~~~~~~deai~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~PfGG~k 462 (496)
T PLN00412 383 PDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPARGPDHFPFQGLK 462 (496)
T ss_pred CCCHHHhCcCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999998754 44578999999
Q ss_pred CCCCCCcchHHHHHhhheeeEEEEecC
Q 014515 392 QSGQGREKGSYSLSNYLQVKAVVTALK 418 (423)
Q Consensus 392 ~SG~g~~~g~~~l~~~~~~k~v~~~~~ 418 (423)
.||+|+++|.+|+++||+.|++++++.
T Consensus 463 ~SG~G~~~g~~~~~~ft~~k~i~~~~~ 489 (496)
T PLN00412 463 DSGIGSQGITNSINMMTKVKSTVINLP 489 (496)
T ss_pred ccccCCCChHHHHHHhcceEEEEEecC
Confidence 999999999999999999999988763
|
|
| >cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-85 Score=656.51 Aligned_cols=408 Identities=31% Similarity=0.430 Sum_probs=375.6
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCC-hhhhhhchHHHHHHHHHHHHHHhhhhcCccC-CC---CCCCcee
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKP-FEQSAQTEVPMTTRLFRYYAGWADKIQGLTA-PA---DGPYHVQ 75 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~-~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~-~~---~~~~~~~ 75 (423)
+|..+|.++|+++++.|++++++|++++++|+||+ ..++...|+..+++.+++++....+...... .. ..+...+
T Consensus 17 ~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~ea~~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (434)
T cd07133 17 PSLEERRDRLDRLKALLLDNQDALAEAISADFGHRSRHETLLAEILPSIAGIKHARKHLKKWMKPSRRHVGLLFLPAKAE 96 (434)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccCCccccCCCceE
Confidence 57899999999999999999999999999999985 5666556999999999999987765443321 11 1234568
Q ss_pred EeeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhh
Q 014515 76 TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 155 (423)
Q Consensus 76 ~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~ 155 (423)
..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.++++++ +|+|+++++++ +.+.++.|.
T Consensus 97 ~~~~P~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~l~~~a-lP~g~~~~v~g-~~~~~~~l~ 174 (434)
T cd07133 97 VEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSALLAELLAEY-FDEDEVAVVTG-GADVAAAFS 174 (434)
T ss_pred EEEecccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHh-CCcCeEEEEeC-ChHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999999997 99999999998 556788888
Q ss_pred cccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCc
Q 014515 156 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES 235 (423)
Q Consensus 156 ~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~ 235 (423)
.|+ +|.|+||||+.+|+.|++.++. +++|+++|+|||||+||++|+|++.|++.+++++|.|+||.|+++++||||++
T Consensus 175 ~~~-v~~V~ftGs~~~g~~v~~~aa~-~~~~~~lElgGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~ 252 (434)
T cd07133 175 SLP-FDHLLFTGSTAVGRHVMRAAAE-NLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLLNAGQTCVAPDYVLVPED 252 (434)
T ss_pred hCC-CCEEEEeCchHHHHHHHHHHHh-cCceEEEEccCCCcEEEeCCCCHHHHHHHHHHHHhccCCCcccCCCEEEEcHH
Confidence 765 9999999999999999999887 78999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC--CCCceeecEEEecCCC
Q 014515 236 VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKD 313 (423)
Q Consensus 236 ~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~--~~g~~~~Ptvl~~~~~ 313 (423)
++|+|+++|++++.++++|+ ++++++||++++.+++++++++++++++|+++++||...+ ..|+|++|||+.++++
T Consensus 253 i~~~f~~~l~~~~~~~~~g~--~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~ 330 (434)
T cd07133 253 KLEEFVAAAKAAVAKMYPTL--ADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGEDFAATRKLPPTLVLNVTD 330 (434)
T ss_pred HHHHHHHHHHHHHHHhcCCC--CCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCcCCCCCcEEeeEEEeCCCC
Confidence 99999999999999999886 4778999999999999999999999999999999987543 3689999999999999
Q ss_pred cccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC--CCCCCCCCCCC
Q 014515 314 DMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYK 391 (423)
Q Consensus 314 ~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~pfgG~~ 391 (423)
++++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||+... ..+.+||||+|
T Consensus 331 ~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k 410 (434)
T cd07133 331 DMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALYYFGEDKAEQDRVLRRTHSGGVTINDTLLHVAQDDLPFGGVG 410 (434)
T ss_pred CCcccccccCCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCcccccCCCCCCcCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999998653 44789999999
Q ss_pred CCCCCCcchHHHHHhhheeeEEE
Q 014515 392 QSGQGREKGSYSLSNYLQVKAVV 414 (423)
Q Consensus 392 ~SG~g~~~g~~~l~~~~~~k~v~ 414 (423)
.||+|+++|.+|+++||+.|+|+
T Consensus 411 ~SG~G~~~g~~~~~~ft~~k~v~ 433 (434)
T cd07133 411 ASGMGAYHGKEGFLTFSHAKPVF 433 (434)
T ss_pred cccCCCcCCHHHHHHhcccceec
Confidence 99999999999999999999873
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. |
| >cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-84 Score=665.82 Aligned_cols=414 Identities=32% Similarity=0.458 Sum_probs=384.2
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCcc-CCCCCCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT-APADGPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||+.++.. |+..+++.+++++..+++..+.. .+...+...+.+++
T Consensus 88 ~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~i~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 166 (518)
T cd07125 88 TPVEERAEILEKAADLLEANRGELIALAAAEAGKTLADADA-EVREAIDFCRYYAAQARELFSDPELPGPTGELNGLELH 166 (518)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccccCCCCceeEEEEe
Confidence 57899999999999999999999999999999999999875 99999999999998887655432 33334566788999
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccC
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 159 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~ 159 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++.+.+..|+.|++
T Consensus 167 P~GVV~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~ 246 (518)
T cd07125 167 GRGVFVCISPWNFPLAIFTGQIAAALAAGNTVIAKPAEQTPLIAARAVELLHEAGVPRDVLQLVPGDGEEIGEALVAHPR 246 (518)
T ss_pred cccEEEEECCcchHHHHHHHHHHHHHHcCCEEEEeCCCcCcHHHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999876678899999999
Q ss_pred cceEeeecCchHHHHHHHHHhhC--CCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccH
Q 014515 160 VDKLAFTGSTTTGKIVLQLAAKS--NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 237 (423)
Q Consensus 160 v~~v~~tGs~~~~~~v~~~~a~~--~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~ 237 (423)
+|.|+||||+.+++.|++.++++ .++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++
T Consensus 247 vd~V~ftGs~~~g~~i~~~aa~~~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~iv~g~f~nsGQ~C~a~~rv~V~~~i~ 326 (518)
T cd07125 247 IDGVIFTGSTETAKLINRALAERDGPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRCSALRLLYLQEEIA 326 (518)
T ss_pred cCEEEEECCHHHHHHHHHHhhhccCCCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcchhH
Confidence 99999999999999999987752 2789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCcccc
Q 014515 238 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLI 317 (423)
Q Consensus 238 ~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~ 317 (423)
|+|+++|++++.++++|+|.++++++||++++.+++++++++++++. ++++++||......|+|++|||+.++ ++.+
T Consensus 327 d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~-~~~vl~gg~~~~~~g~~~~Ptvl~~v--~~~i 403 (518)
T cd07125 327 ERFIEMLKGAMASLKVGDPWDLSTDVGPLIDKPAGKLLRAHTELMRG-EAWLIAPAPLDDGNGYFVAPGIIEIV--GIFD 403 (518)
T ss_pred HHHHHHHHHHHhcCCccCCCCCCCCcCCCcCHHHHHHHHHHHHHHHh-CCEEEeCCCcCCCCCeEEccEEEeec--CChH
Confidence 99999999999999999999999999999999999999999999987 46899988753336899999999877 8899
Q ss_pred cccccccCeeEEEecC--CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC--CCCCCCCCCCCC
Q 014515 318 AKDEIFGPVQSILKYK--DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF--DAAIPFGGYKQS 393 (423)
Q Consensus 318 ~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~--~~~~pfgG~~~S 393 (423)
++||+||||++|++|+ |+||||+++|+++|||++||||+|.+.++++++++++|.|+||+.+.. .+.+||||+|.|
T Consensus 404 ~~eE~FgPVl~v~~~~~~~~deAi~~~n~~~~gLta~Vft~d~~~~~~~~~~l~~G~V~IN~~~~~~~~~~~PfGG~~~S 483 (518)
T cd07125 404 LTTEVFGPILHVIRFKAEDLDEAIEDINATGYGLTLGIHSRDEREIEYWRERVEAGNLYINRNITGAIVGRQPFGGWGLS 483 (518)
T ss_pred hhCcccCCeEEEEEeCCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccc
Confidence 9999999999999999 999999999999999999999999999999999999999999987543 367899999999
Q ss_pred CCCC-cchHHHHHhhheeeEEEEecC
Q 014515 394 GQGR-EKGSYSLSNYLQVKAVVTALK 418 (423)
Q Consensus 394 G~g~-~~g~~~l~~~~~~k~v~~~~~ 418 (423)
|+|+ ++|.+++++||+.|++++++.
T Consensus 484 G~G~~~gg~~~~~~ft~~k~i~~~~~ 509 (518)
T cd07125 484 GTGPKAGGPNYLLRFGNEKTVSLNTT 509 (518)
T ss_pred cCCcccccHHHHHHhcceEEEEEEcc
Confidence 9995 688999999999999988763
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. |
| >cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-84 Score=662.40 Aligned_cols=408 Identities=27% Similarity=0.331 Sum_probs=368.4
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcC--------ccCCCCC-C
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG--------LTAPADG-P 71 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~--------~~~~~~~-~ 71 (423)
+|.++|+++|+++++.|++++++|+++ ++|+|||+.++.. |+..+++.++|++.++++... +..+... +
T Consensus 56 ~~~~~Ra~~L~~~a~~l~~~~~~la~l-~~e~Gkp~~ea~~-Ev~~~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~ 133 (513)
T cd07128 56 LTFHERAAMLKALAKYLMERKEDLYAL-SAATGATRRDSWI-DIDGGIGTLFAYASLGRRELPNAHFLVEGDVEPLSKDG 133 (513)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHhhccccccccCCcccccCCCc
Confidence 578999999999999999999999996 9999999999875 999999999999988766542 1122111 1
Q ss_pred -CceeEeecc-ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcC-CCCCcEEEEeCCch
Q 014515 72 -YHVQTLHEP-IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGP 148 (423)
Q Consensus 72 -~~~~~~~~P-~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag-~P~g~v~~v~~~~~ 148 (423)
...+..++| +|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.++| +|+|++|+++|++.
T Consensus 134 ~~~~~~~~~P~~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaG~lP~gv~~~v~g~~~ 213 (513)
T cd07128 134 TFVGQHILTPRRGVAVHINAFNFPVWGMLEKFAPALLAGVPVIVKPATATAYLTEAVVKDIVESGLLPEGALQLICGSVG 213 (513)
T ss_pred cccceEEEEecccEEEEECCcccHHHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCCCCCCcEEEecCChH
Confidence 135677999 599999999999999999999999999999999999999999999999999999 99999999998544
Q ss_pred hHHHHhhcccCcceEeeecCchHHHHHHHHHh-hCCCCceEEecCCcceEEEcCCCC-----HHHHHHHHHHHHHhccCC
Q 014515 149 TAGAALASHMEVDKLAFTGSTTTGKIVLQLAA-KSNLKPVTLELGGKSPFIVCEDAD-----VDKAAELAHYALFFNQGQ 222 (423)
Q Consensus 149 ~~~~~l~~~~~v~~v~~tGs~~~~~~v~~~~a-~~~~~~~~~e~gg~~~~iv~~~ad-----~~~aa~~iv~~~~~~~Gq 222 (423)
+++..+ +.+|.|.||||+++|+.|++.++ ..+++|+++|+|||||+||++||| ++.+++.+++++|.|+||
T Consensus 214 ~~~~~l---~~~d~v~fTGS~~~G~~i~~~a~~a~~~~~~~lElGGknp~IV~~DAd~~~~dld~aa~~iv~~~f~~aGQ 290 (513)
T cd07128 214 DLLDHL---GEQDVVAFTGSAATAAKLRAHPNIVARSIRFNAEADSLNAAILGPDATPGTPEFDLFVKEVAREMTVKAGQ 290 (513)
T ss_pred HHhccc---CCCCEEEEECCHHHHHHHHHHhhhhccCceEEEeccCcCcEEECCCCCcchhhHHHHHHHHHHHHHHhcCC
Confidence 444333 57899999999999999999853 237899999999999999999999 999999999999999999
Q ss_pred cccCCCeEEEeCccHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccc------
Q 014515 223 CCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL------ 296 (423)
Q Consensus 223 ~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~------ 296 (423)
.|++++|+|||++++++|+++|+++++++++|+|.|+++++||++++.+++++.++|++++++ +++++||...
T Consensus 291 ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~lGpli~~~~~~~i~~~i~~a~~~-A~vl~GG~~~~~~~~~ 369 (513)
T cd07128 291 KCTAIRRAFVPEARVDAVIEALKARLAKVVVGDPRLEGVRMGPLVSREQREDVRAAVATLLAE-AEVVFGGPDRFEVVGA 369 (513)
T ss_pred cccCCceEEEehHHHHHHHHHHHHHHHhcccCCCccCCCCcCCCCCHHHHHHHHHHHHHHHhC-CEEEECCCccccccCC
Confidence 999999999999999999999999999999999999999999999999999999999999988 9999999652
Q ss_pred -CCCCceeecEEEecCCC--cccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcc--ee
Q 014515 297 -GAKGYYIKPTVFTGVKD--DMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALR--VG 371 (423)
Q Consensus 297 -~~~g~~~~Ptvl~~~~~--~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~--~g 371 (423)
...|+|++|||+.++++ ++.+++||+||||++|++|+|+||+++++|+++|||++||||+|.+++++++++++ +|
T Consensus 370 ~~~~g~~~~PTvl~~v~~~~~~~i~~eE~FGPVl~V~~~~~~deai~~aN~~~~gL~asvft~d~~~~~~~~~~l~~~~G 449 (513)
T cd07128 370 DAEKGAFFPPTLLLCDDPDAATAVHDVEAFGPVATLMPYDSLAEAIELAARGRGSLVASVVTNDPAFARELVLGAAPYHG 449 (513)
T ss_pred CCCCCEEECCEEEeccCCcccchHHhCCCcCCeEEEEeeCCHHHHHHHHhcCCCCeeEEEEeCCHHHHHHHHHHHHhhCC
Confidence 13589999999998886 48999999999999999999999999999999999999999999999999999997 99
Q ss_pred EEEEcCcCC---------CCCCCCCCCCCCCCCCCc-chHHHHHhhheeeEEE
Q 014515 372 SVWINCFDV---------FDAAIPFGGYKQSGQGRE-KGSYSLSNYLQVKAVV 414 (423)
Q Consensus 372 ~v~iN~~~~---------~~~~~pfgG~~~SG~g~~-~g~~~l~~~~~~k~v~ 414 (423)
+||||+.+. ..+.+||||+|.||+|++ +|.+++++|++.|+|.
T Consensus 450 ~v~IN~~~~~~~~~~~~~~~~~~pfGG~k~SG~G~~~gg~~~l~~~~~~k~v~ 502 (513)
T cd07128 450 RLLVLNRDSAKESTGHGSPLPQLVHGGPGRAGGGEELGGLRGVKHYMQRTAVQ 502 (513)
T ss_pred EEEEcCCccccccccccCCCCCCCCCCcccCCCCcccccHHHHHHhheeeeee
Confidence 999998642 245789999999999999 4799999999999873
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. |
| >cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-84 Score=650.57 Aligned_cols=409 Identities=35% Similarity=0.471 Sum_probs=379.9
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCc-cCCC---CCCCceeE
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL-TAPA---DGPYHVQT 76 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~-~~~~---~~~~~~~~ 76 (423)
+|..+|.++|+++++.|++++++|++++++|+|||+.++...|+..+++.+++++......... ..+. ..+...+.
T Consensus 17 ~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (433)
T cd07134 17 STAAERIAKLKRLKKAILARREEIIAALAADFRKPAAEVDLTEILPVLSEINHAIKHLKKWMKPKRVRTPLLLFGTKSKI 96 (433)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccCCccccCCCceEE
Confidence 5889999999999999999999999999999999999886569999999999998766543322 1211 12446789
Q ss_pred eeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhc
Q 014515 77 LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALAS 156 (423)
Q Consensus 77 ~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~ 156 (423)
.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++ +|+|+++++++ +.+.+..|+.
T Consensus 97 ~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~~~~~~~a-~p~g~v~~v~g-~~~~~~~l~~ 174 (433)
T cd07134 97 RYEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREA-FDEDEVAVFEG-DAEVAQALLE 174 (433)
T ss_pred EEecCCEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCEEEEEeC-ChhHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999 99999999998 5568889999
Q ss_pred ccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCcc
Q 014515 157 HMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 236 (423)
Q Consensus 157 ~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~ 236 (423)
|+ ++.|+||||+.+|+.|++.+++ .++|+++|+||+||+||++|+|++.|++.+++++|.++||.|+++++||||+++
T Consensus 175 ~~-v~~v~ftGs~~~g~~i~~~aa~-~~~~~~lelgG~~~~iV~~dAD~~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v 252 (433)
T cd07134 175 LP-FDHIFFTGSPAVGKIVMAAAAK-HLASVTLELGGKSPTIVDETADLKKAAKKIAWGKFLNAGQTCIAPDYVFVHESV 252 (433)
T ss_pred CC-CCEEEEECChHHHHHHHHHHHh-cCCcEEEEccCCCcEEECCCCCHHHHHHHHHHHhhcCcCCcccCCcEEEECHHH
Confidence 87 9999999999999999999887 789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCC-CCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCcc
Q 014515 237 YDQFVEKANALAMKRVVGDP-FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDM 315 (423)
Q Consensus 237 ~~~f~~~l~~~~~~~~~g~p-~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~ 315 (423)
+|+|+++|+++++.++.|+| .+.++++||++++.+++++.+++++++++|+++++||... ..|+|++|||+.++++++
T Consensus 253 ~d~f~~~L~~~~~~~~~~~~~~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~~-~~g~~~~Ptvl~~~~~~~ 331 (433)
T cd07134 253 KDAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQFD-AAQRYIAPTVLTNVTPDM 331 (433)
T ss_pred HHHHHHHHHHHHHHHcCCCCCcCCCCccCCcCCHHHHHHHHHHHHHHHhCCCEEEeCCCcC-CCCCEEeeEEEeCCCCcc
Confidence 99999999999999988887 8899999999999999999999999999999999999753 358999999999999999
Q ss_pred cccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC--CCCCCCCCCCCCC
Q 014515 316 LIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQS 393 (423)
Q Consensus 316 ~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~pfgG~~~S 393 (423)
.+++||+||||++|++|+|+||+|+++|+++|||++||||+|.+.++++++++++|.|+||+.+. ..+.+||||+|+|
T Consensus 332 ~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~S 411 (433)
T cd07134 332 KIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVLARTSSGGVVVNDVVLHFLNPNLPFGGVNNS 411 (433)
T ss_pred HHHhccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCcccccCCCCCCCCCcCcc
Confidence 99999999999999999999999999999999999999999999999999999999999998754 3477999999999
Q ss_pred CCCCcchHHHHHhhheeeEEE
Q 014515 394 GQGREKGSYSLSNYLQVKAVV 414 (423)
Q Consensus 394 G~g~~~g~~~l~~~~~~k~v~ 414 (423)
|+|+++|.+++++||+.|+++
T Consensus 412 G~G~~~g~~~l~~~~~~k~i~ 432 (433)
T cd07134 412 GIGSYHGVYGFKAFSHERAVL 432 (433)
T ss_pred cCCCcCcHHHHHHhcccceee
Confidence 999999999999999999874
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. |
| >cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-83 Score=656.07 Aligned_cols=409 Identities=37% Similarity=0.539 Sum_probs=385.0
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCC-----CCCcee
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-----GPYHVQ 75 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~ 75 (423)
+|.++|.++|+++++.|++++++|++++++|+|||..++.. |+..+++.+++++...+...+...+.. .+...+
T Consensus 58 ~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 136 (473)
T cd07082 58 MPLEERIDCLHKFADLLKENKEEVANLLMWEIGKTLKDALK-EVDRTIDYIRDTIEELKRLDGDSLPGDWFPGTKGKIAQ 136 (473)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcccccccccCCCceeE
Confidence 48899999999999999999999999999999999999875 999999999999988877655433221 245568
Q ss_pred EeeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhh
Q 014515 76 TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 155 (423)
Q Consensus 76 ~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~ 155 (423)
.+++|+|||++|+|||+|+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++.+.++.|.
T Consensus 137 ~~~~P~GVv~~I~p~N~P~~~~~~~i~~AL~aGN~vilKps~~~~~~~~~l~~~l~~aglp~~~~~vv~g~~~~~~~~l~ 216 (473)
T cd07082 137 VRREPLGVVLAIGPFNYPLNLTVSKLIPALIMGNTVVFKPATQGVLLGIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLV 216 (473)
T ss_pred EEEecceEEEEECCcCcHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHh
Confidence 89999999999999999999999999999999999999999999999999999999999999999999997777899999
Q ss_pred cccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCc
Q 014515 156 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES 235 (423)
Q Consensus 156 ~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~ 235 (423)
.|+++|.|+||||+++++.|.+.++ ++|+++|+||+||+||++|+|++.|++.+++++|.++||.|+++++||||++
T Consensus 217 ~~~~v~~V~ftGs~~~g~~i~~~a~---~~~~~lelgg~n~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~ 293 (473)
T cd07082 217 THGRIDVISFTGSTEVGNRLKKQHP---MKRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHES 293 (473)
T ss_pred cCCCCCEEEEECcHHHHHHHHHHhC---CCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCcCCCCeEEEEcHH
Confidence 9999999999999999999998765 6899999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCcc
Q 014515 236 VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDM 315 (423)
Q Consensus 236 ~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~ 315 (423)
++|+|+++|.++++++++|+|.++++++||+++..+++++++++++++.+|+++++||... .|+|+.|||+.++++++
T Consensus 294 i~d~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~~~~a~~~ga~~~~gg~~~--~g~~~~Ptvl~~~~~~~ 371 (473)
T cd07082 294 VADELVELLKEEVAKLKVGMPWDNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGRE--GGNLIYPTLLDPVTPDM 371 (473)
T ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC--CCeEEeeEEEecCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999763 38999999999999999
Q ss_pred cccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCC-CCCCCCCCCCCC
Q 014515 316 LIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFD-AAIPFGGYKQSG 394 (423)
Q Consensus 316 ~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~-~~~pfgG~~~SG 394 (423)
++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.+.++++++++|.|+||+++... +.+||||+|.||
T Consensus 372 ~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfGG~k~SG 451 (473)
T cd07082 372 RLAWEEPFGPVLPIIRVNDIEEAIELANKSNYGLQASIFTKDINKARKLADALEVGTVNINSKCQRGPDHFPFLGRKDSG 451 (473)
T ss_pred HHHhCcCcCceEEEEEeCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999876543 568999999999
Q ss_pred CCCcchHHHHHhhheeeEEEE
Q 014515 395 QGREKGSYSLSNYLQVKAVVT 415 (423)
Q Consensus 395 ~g~~~g~~~l~~~~~~k~v~~ 415 (423)
+|+++|.+|+++||+.|++++
T Consensus 452 ~g~~~g~~~l~~~~~~k~i~~ 472 (473)
T cd07082 452 IGTQGIGDALRSMTRRKGIVI 472 (473)
T ss_pred cCCCChHHHHHHhhceeEEEE
Confidence 999999999999999999875
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. |
| >cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-83 Score=654.46 Aligned_cols=407 Identities=44% Similarity=0.688 Sum_probs=381.1
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCC-----CCCCcee
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-----DGPYHVQ 75 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-----~~~~~~~ 75 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++.. |+..+++.+++++..+....++..+. ..+...+
T Consensus 40 ~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (453)
T cd07149 40 LPAYERAEILERAAQLLEERREEFARTIALEAGKPIKDARK-EVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIGF 118 (453)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccccCCCCCeeEE
Confidence 57899999999999999999999999999999999999875 99999999999988776654443221 1123457
Q ss_pred EeeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhh
Q 014515 76 TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 155 (423)
Q Consensus 76 ~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~ 155 (423)
.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++.+++..|+
T Consensus 119 ~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VI~Kps~~~p~~~~~l~~~l~~ag~P~gvv~~v~g~~~~~~~~l~ 198 (453)
T cd07149 119 TIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPASQTPLSALKLAELLLEAGLPKGALNVVTGSGETVGDALV 198 (453)
T ss_pred EEeecceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCcCccceEEeecCchHHHHHHh
Confidence 88999999999999999999999999999999999999999999999999999999999999999999987777789999
Q ss_pred cccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCc
Q 014515 156 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES 235 (423)
Q Consensus 156 ~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~ 235 (423)
.||++|.|+||||+++|+.|.+.++ ++|+++|+|||||+||++|+|++.|++.+++++|.++||.|+++++||||++
T Consensus 199 ~~~~v~~V~ftGs~~~g~~i~~~a~---~~~~~lelGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~ 275 (453)
T cd07149 199 TDPRVRMISFTGSPAVGEAIARKAG---LKKVTLELGSNAAVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHED 275 (453)
T ss_pred cCCCCCEEEEECCHHHHHHHHHHcC---CCceeeecCCCceEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCceEEEcHh
Confidence 9999999999999999999998763 6899999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCcc
Q 014515 236 VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDM 315 (423)
Q Consensus 236 ~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~ 315 (423)
++|+|+++|++++..+++|+|.++++++||++++.+++++++++++++.+|+++++||.. .|+|++|||+.++++++
T Consensus 276 i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~---~g~~~~Ptvl~~~~~~~ 352 (453)
T cd07149 276 IYDEFLERFVAATKKLVVGDPLDEDTDVGPMISEAEAERIEEWVEEAVEGGARLLTGGKR---DGAILEPTVLTDVPPDM 352 (453)
T ss_pred HHHHHHHHHHHHHHhCCcCCCCCCCCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCC---CCeEEcCEEEeCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999864 47899999999999999
Q ss_pred cccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC-CCCCCCCCCCCCC
Q 014515 316 LIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSG 394 (423)
Q Consensus 316 ~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~pfgG~~~SG 394 (423)
.++++|+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|.|+||+.+.. .+.+||||+|+||
T Consensus 353 ~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLt~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfGG~~~SG 432 (453)
T cd07149 353 KVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVFTNDLQKALKAARELEVGGVMINDSSTFRVDHMPYGGVKESG 432 (453)
T ss_pred HHHhCCCCCceEEEEEeCCHHHHHHHHhCCCcCceEEEEcCCHHHHHHHHHHcCcCeEEECCCCCCCCCCCCcCCccccc
Confidence 999999999999999999999999999999999999999999999999999999999999987654 4678999999999
Q ss_pred CCCcchHHHHHhhheeeEEE
Q 014515 395 QGREKGSYSLSNYLQVKAVV 414 (423)
Q Consensus 395 ~g~~~g~~~l~~~~~~k~v~ 414 (423)
+|+++|.+|+++|++.|+++
T Consensus 433 ~G~~~g~~~~~~~~~~k~~~ 452 (453)
T cd07149 433 TGREGPRYAIEEMTEIKLVC 452 (453)
T ss_pred cCCCChHHHHHHhhceeEEe
Confidence 99999999999999999875
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-83 Score=673.04 Aligned_cols=410 Identities=25% Similarity=0.327 Sum_probs=370.1
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhc--------CccCCCC--C
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ--------GLTAPAD--G 70 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~--------~~~~~~~--~ 70 (423)
+|.++|+++|+++++.|++++++|++ +++|+|||+.++.. |+..+++.+++++...++.. ++..+.. .
T Consensus 56 ~~~~eR~~~L~~~a~~l~~~~~ela~-~~~e~GK~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~ 133 (663)
T TIGR02278 56 LTFHERARMLKALAQYLSERKEALYA-LAATTGATRRDNWV-DIDGGIGTLFTYSSLGRRELPDANLIPEDEFEPLSKDG 133 (663)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHcCCCHHHHHH-HHHHHHHHHHHHHHhhhhhccccccccCCceeccCCCC
Confidence 57899999999999999999999999 59999999999875 99999999999998876532 2222211 1
Q ss_pred CCceeEeeccc-eeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcC-CCCCcEEEEeCCch
Q 014515 71 PYHVQTLHEPI-GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGP 148 (423)
Q Consensus 71 ~~~~~~~~~P~-Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag-~P~g~v~~v~~~~~ 148 (423)
+...+..++|+ |||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++| +|+|++|+++|+.
T Consensus 134 ~~~~~~~~~P~~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~Vv~KPs~~tp~~~~~l~~~~~~aG~lP~gv~~~v~g~~- 212 (663)
T TIGR02278 134 SFQGRHILTPKGGVAVQINAFNFPVWGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVESGLLPEGSLQLICGSA- 212 (663)
T ss_pred ccceEEEEEeCCceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCcEEEEeCCh-
Confidence 23467899998 99999999999999999999999999999999999999999999999999999 9999999999842
Q ss_pred hHHHHhhcccCcceEeeecCchHHHHHHHHHh-hCCCCceEEecCCcceEEEcCCCC-----HHHHHHHHHHHHHhccCC
Q 014515 149 TAGAALASHMEVDKLAFTGSTTTGKIVLQLAA-KSNLKPVTLELGGKSPFIVCEDAD-----VDKAAELAHYALFFNQGQ 222 (423)
Q Consensus 149 ~~~~~l~~~~~v~~v~~tGs~~~~~~v~~~~a-~~~~~~~~~e~gg~~~~iv~~~ad-----~~~aa~~iv~~~~~~~Gq 222 (423)
+..+..+++++.|+||||+++|+.|++.++ ..+++|+++|+|||||+||++||| ++.|++.+++++|.|+||
T Consensus 213 --~~~~~~~~~~~~V~FTGS~~~G~~i~~~aaaa~~~~~~~lELGGk~p~IV~~dAd~~~~dl~~aa~~i~~~~f~~sGQ 290 (663)
T TIGR02278 213 --GDLLDHLDHRDVVAFTGSAATADRLRAHPNVLERGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIKAGQ 290 (663)
T ss_pred --HHHHhcCCCCCEEEEECCHHHHHHHHHhHhHHhcCceEEEEcCCCCeEEEcCCCCccchhHHHHHHHHHHHHHhcCCC
Confidence 233333467899999999999999998743 237899999999999999999999 999999999999999999
Q ss_pred cccCCCeEEEeCccHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCce
Q 014515 223 CCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYY 302 (423)
Q Consensus 223 ~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~ 302 (423)
.|++++|||||++++|+|+++|++++.++++|+|.++++++||++++.++++++++|++++++|+++++||... ..|+|
T Consensus 291 ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vG~p~~~~t~~Gpli~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~-~~g~~ 369 (663)
T TIGR02278 291 KCTAIRRVIVPKALLEAVLKALQARLAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGPGR-LDGAF 369 (663)
T ss_pred CccCCceEEEeHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcC-CCCee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999753 35899
Q ss_pred eecEEEecCCCcc-cccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhc--ceeEEEE-cCc
Q 014515 303 IKPTVFTGVKDDM-LIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL--RVGSVWI-NCF 378 (423)
Q Consensus 303 ~~Ptvl~~~~~~~-~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l--~~g~v~i-N~~ 378 (423)
++|||+.++++++ .+++||+||||++|++|+|.+||++++|+++|||++||||+|.+.++++++++ ++|.|+| |..
T Consensus 370 ~~PTvl~~~~~~~~~i~~eE~FGPVl~V~~~~~~~eai~~aN~~~~gL~a~vft~d~~~~~~~~~~l~~~~G~v~InN~~ 449 (663)
T TIGR02278 370 FPPTLLLAEDPWAGAVHATEAFGPVATFFPYGDRAEAARLAARGGGSLVATLATSDPEEARQFILGLAPYHGRLHILNRD 449 (663)
T ss_pred EccEEEeeCCcchhhHHhccccCCeEEEEeeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHHHHhhCCEEEECCCc
Confidence 9999999888875 79999999999999999999999999999999999999999999999999999 8999999 641
Q ss_pred -------C-CCCCCCCCCCCCCCCCCCc-chHHHHHhhheeeEEEEe
Q 014515 379 -------D-VFDAAIPFGGYKQSGQGRE-KGSYSLSNYLQVKAVVTA 416 (423)
Q Consensus 379 -------~-~~~~~~pfgG~~~SG~g~~-~g~~~l~~~~~~k~v~~~ 416 (423)
. ...+.+||||+|.||+|++ +|.+++++|++.|++...
T Consensus 450 ~~~~~~~~~~~~~~~pfGG~k~SG~G~~~g~~~~l~~f~~~k~v~~~ 496 (663)
T TIGR02278 450 DAAESTGHGSPLPRLLHGGPGRAGGGEELGGLRSVKHYMQRTAIQGS 496 (663)
T ss_pred ccccccCCCCCCCCCCCCCCccCcCCCccchHHHHHHhceeEEEEcC
Confidence 1 1235689999999999999 578999999999998554
|
This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. |
| >cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-83 Score=645.33 Aligned_cols=407 Identities=30% Similarity=0.427 Sum_probs=372.8
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCC----CCCCceeE
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA----DGPYHVQT 76 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~ 76 (423)
+|..+|+++|+++++.|++++++|++++++|+|||+.++...|+..+++.+++++..++.......+. ......++
T Consensus 17 ~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (443)
T cd07132 17 RPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKFEAVLSEILLVKNEIKYAISNLPEWMKPEPVKKNLATLLDDVYI 96 (443)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCccccCCCceEE
Confidence 57899999999999999999999999999999999999876699999999999988776654322111 12245788
Q ss_pred eeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhc
Q 014515 77 LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALAS 156 (423)
Q Consensus 77 ~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~ 156 (423)
.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++ +|+|+++++++++. ....|+.
T Consensus 97 ~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~-lp~gv~~vv~g~~~-~~~~l~~ 174 (443)
T cd07132 97 YKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELIPKY-LDKECYPVVLGGVE-ETTELLK 174 (443)
T ss_pred EEecccEEEEEcCCchhHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCeEEEEeCCHH-HHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999986 99999999998544 4556665
Q ss_pred ccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCcc
Q 014515 157 HMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 236 (423)
Q Consensus 157 ~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~ 236 (423)
+++|.|+||||+.+|+.|.+.++. +++|+++|+|||||+||++|||++.|++.+++++|.++||.|+++++||||+++
T Consensus 175 -~~vd~V~fTGs~~~g~~i~~~a~~-~~~~~~lElgG~~p~iV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i 252 (443)
T cd07132 175 -QRFDYIFYTGSTSVGKIVMQAAAK-HLTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKFINAGQTCIAPDYVLCTPEV 252 (443)
T ss_pred -CCCCEEEEECChHHHHHHHHHHHh-hCCceEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCceeCCcEEEEcHHH
Confidence 589999999999999999998887 789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCccc
Q 014515 237 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDML 316 (423)
Q Consensus 237 ~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~ 316 (423)
+|+|+++|.+++++++.|+| ++++++||+++..+++++++++++ +++++||... ..|.|++|||+.+++++++
T Consensus 253 ~d~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~v~~~i~~-----a~~~~gg~~~-~~~~~~~Ptvl~~v~~~~~ 325 (443)
T cd07132 253 QEKFVEALKKTLKEFYGEDP-KESPDYGRIINDRHFQRLKKLLSG-----GKVAIGGQTD-EKERYIAPTVLTDVKPSDP 325 (443)
T ss_pred HHHHHHHHHHHHHHhcCCCC-CcccccCCcCCHHHHHHHHHHHhC-----CEEEeCCccC-CCCCEEeeEEEeCCCCCCh
Confidence 99999999999999998888 788999999999999999999973 4889998753 3688999999999999999
Q ss_pred ccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC--CCCCCCCCCCCCC
Q 014515 317 IAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF--DAAIPFGGYKQSG 394 (423)
Q Consensus 317 ~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~--~~~~pfgG~~~SG 394 (423)
+++||+||||++|++|+|++|||+++|+++|||++||||+|.+.+.++++++++|.|+||++... .+.+||||+|+||
T Consensus 326 ~~~eE~FgPvl~v~~~~~~~eai~~an~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG 405 (443)
T cd07132 326 VMQEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINKILSNTSSGGVCVNDTIMHYTLDSLPFGGVGNSG 405 (443)
T ss_pred HHhccccCceeEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCcccccCCCCCCCCCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999986533 3679999999999
Q ss_pred CCCcchHHHHHhhheeeEEEEecC
Q 014515 395 QGREKGSYSLSNYLQVKAVVTALK 418 (423)
Q Consensus 395 ~g~~~g~~~l~~~~~~k~v~~~~~ 418 (423)
+|+++|.+|+++|++.|+++++.+
T Consensus 406 ~G~~~g~~~l~~~~~~k~v~~~~~ 429 (443)
T cd07132 406 MGAYHGKYSFDTFSHKRSCLVKSL 429 (443)
T ss_pred CCCcccHHHHHHhccccEEEEccc
Confidence 999999999999999999987753
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. |
| >PRK11903 aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-83 Score=654.38 Aligned_cols=410 Identities=25% Similarity=0.332 Sum_probs=367.3
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCC---------CC
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD---------GP 71 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~---------~~ 71 (423)
+|.++|+++|+++++.|++++++|++++++|+|||+.+++. |+..+++.+++++.+++...+...... ..
T Consensus 60 ~~~~eR~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~~a~~-ev~~~i~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~~ 138 (521)
T PRK11903 60 LTYAQRAALLAAIVKVLQANRDAYYDIATANSGTTRNDSAV-DIDGGIFTLGYYAKLGAALGDARLLRDGEAVQLGKDPA 138 (521)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHcCCCcccCCCcccccccccc
Confidence 57899999999999999999999999999999999999876 999999999999998866543221100 11
Q ss_pred CceeEeecc-ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcC-CCCCcEEEEeCCchh
Q 014515 72 YHVQTLHEP-IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPT 149 (423)
Q Consensus 72 ~~~~~~~~P-~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag-~P~g~v~~v~~~~~~ 149 (423)
......++| +|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++| +|+|++++++|++.+
T Consensus 139 ~~~~~~~~P~~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~ag~lP~gv~~~v~g~~~~ 218 (521)
T PRK11903 139 FQGQHVLVPTRGVALFINAFNFPAWGLWEKAAPALLAGVPVIVKPATATAWLTQRMVKDVVAAGILPAGALSVVCGSSAG 218 (521)
T ss_pred ccceEEEecCcceEEEECCcchHHHHHHHHHHHHHHcCCeEEEEcCCcChHHHHHHHHHHHHhCCCCcCceEEeeCCchH
Confidence 234667889 699999999999999999999999999999999999999999999999999999 999999999986655
Q ss_pred HHHHhhcccCcceEeeecCchHHHHHHHHHh-hCCCCceEEecCCcceEEEcCCCC-----HHHHHHHHHHHHHhccCCc
Q 014515 150 AGAALASHMEVDKLAFTGSTTTGKIVLQLAA-KSNLKPVTLELGGKSPFIVCEDAD-----VDKAAELAHYALFFNQGQC 223 (423)
Q Consensus 150 ~~~~l~~~~~v~~v~~tGs~~~~~~v~~~~a-~~~~~~~~~e~gg~~~~iv~~~ad-----~~~aa~~iv~~~~~~~Gq~ 223 (423)
+...| +++|.|+||||+.+|+.|++.++ ..+++|+++|+|||||+||++|+| ++.+++.+++++|.|+||.
T Consensus 219 ~~~~l---~~v~~v~fTGS~~~G~~v~~~aa~~~~~~~~~lElGGknp~IV~~dAd~~~~~~~~aa~~i~~~~f~~sGQ~ 295 (521)
T PRK11903 219 LLDHL---QPFDVVSFTGSAETAAVLRSHPAVVQRSVRVNVEADSLNSALLGPDAAPGSEAFDLFVKEVVREMTVKSGQK 295 (521)
T ss_pred HHhcc---cCCCEEEEECCHHHHHHHHhhhhhhccCceeEeeccccCceEEccCCcccchhHHHHHHHHHHHHHhccCCC
Confidence 55444 68999999999999999998653 236899999999999999999999 5999999999999999999
Q ss_pred ccCCCeEEEeCccHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccc------C
Q 014515 224 CCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL------G 297 (423)
Q Consensus 224 C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~------~ 297 (423)
|+++++||||++++|+|+++|+++++++++|+|.++++++||+++..+++++.++|+.. .+|+++++||... .
T Consensus 296 C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~~-~~ga~vl~gg~~~~~~~~~~ 374 (521)
T PRK11903 296 CTAIRRIFVPEALYDAVAEALAARLAKTTVGNPRNDGVRMGPLVSRAQLAAVRAGLAAL-RAQAEVLFDGGGFALVDADP 374 (521)
T ss_pred ccCCeEEEEehhHHHHHHHHHHHHHHhccCCCCCCCcCccCCCCCHHHHHHHHHHHHHH-hcCCEEEECCccCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999965 5799999999652 1
Q ss_pred CCCceeecEEEecCCC--cccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhc--ceeEE
Q 014515 298 AKGYYIKPTVFTGVKD--DMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL--RVGSV 373 (423)
Q Consensus 298 ~~g~~~~Ptvl~~~~~--~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l--~~g~v 373 (423)
..|+|++|||+.++++ ++.+++||+||||++|++|+|++|+|+++|+++|||++||||+|.++++++++++ ++|+|
T Consensus 375 ~~g~~~~PTvl~~~~~~~~~~i~~eE~FGPvl~V~~~~~~~eai~~~N~~~~gL~asvft~d~~~~~~~~~~l~~~~G~V 454 (521)
T PRK11903 375 AVAACVGPTLLGASDPDAATAVHDVEVFGPVATLLPYRDAAHALALARRGQGSLVASVYSDDAAFLAAAALELADSHGRV 454 (521)
T ss_pred CCCeEEcCEEEeccCCCccchHHhCcccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHHhCCEE
Confidence 3578999999986554 4688999999999999999999999999999999999999999999999999999 99999
Q ss_pred EEcCcCC---------CCCCCCCCCCCCCCCCCcc-hHHHHHhhheeeEEEE
Q 014515 374 WINCFDV---------FDAAIPFGGYKQSGQGREK-GSYSLSNYLQVKAVVT 415 (423)
Q Consensus 374 ~iN~~~~---------~~~~~pfgG~~~SG~g~~~-g~~~l~~~~~~k~v~~ 415 (423)
+||+.+. ..+.+||||+|.||+|+++ |.+++++||+.|++..
T Consensus 455 ~iN~~~~~~~~~~~~~~~~~~PfGG~k~SG~Gr~~g~~~~l~~~t~~~~~~~ 506 (521)
T PRK11903 455 HVISPDVAALHTGHGNVMPQSLHGGPGRAGGGEELGGLRALAFYHRRSAVQA 506 (521)
T ss_pred EEcCcccccccccCCCCCCCCCCCCCCcCcCCcccccHHHHHHHhccceeeC
Confidence 9997432 3457899999999999985 5899999999877643
|
|
| >TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-83 Score=649.27 Aligned_cols=397 Identities=34% Similarity=0.485 Sum_probs=368.7
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
+|..+|.++|+++++.|++++++|++++++|+|||..++.. |+..+++.+++++...+...+ ...++|
T Consensus 93 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~i~~l~~~a~~~~~~~~-----------~~~~~P 160 (500)
T TIGR01238 93 TPAKERAAKLDRLADLLELHMPELMALCVREAGKTIHNAIA-EVREAVDFCRYYAKQVRDVLG-----------EFSVES 160 (500)
T ss_pred CCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcC-----------ceeccC
Confidence 57899999999999999999999999999999999999875 999999999999987754422 135899
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 160 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v 160 (423)
+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++.+.+.++.|+.|+++
T Consensus 161 ~GVV~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v 240 (500)
T TIGR01238 161 RGVFVCISPWNFPLAIFTGQISAALAAGNTVIAKPAEQTSLIAYRAVELMQEAGFPAGTIQLLPGRGADVGAALTSDPRI 240 (500)
T ss_pred cceEEEECCCchHHHHHHHHHHHHHHcCCEEEEeCCCCccHHHHHHHHHHHHcCCCCCceEEEecCcchHHHHHhcCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999998766789999999999
Q ss_pred ceEeeecCchHHHHHHHHHhhCCC---CceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccH
Q 014515 161 DKLAFTGSTTTGKIVLQLAAKSNL---KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 237 (423)
Q Consensus 161 ~~v~~tGs~~~~~~v~~~~a~~~~---~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~ 237 (423)
|.|+||||+.+|+.|++.+++ ++ +|+++|+|||||+||++|+|++.|++.+++++|.|+||.|+++++||||++++
T Consensus 241 ~~V~ftGs~~~g~~v~~~aa~-~~~~~~~v~lElGGknp~IV~~dAdld~Aa~~i~~~~f~nsGQ~C~a~~rv~V~~~i~ 319 (500)
T TIGR01238 241 AGVAFTGSTEVAQLINQTLAQ-REDAPVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVA 319 (500)
T ss_pred CeEEEECCHHHHHHHHHHHhh-cccCCceEEEecCCcCcEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceeEEcHhhH
Confidence 999999999999999999887 43 79999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCc---ccCCCCceeecEEEecCCCc
Q 014515 238 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGE---RLGAKGYYIKPTVFTGVKDD 314 (423)
Q Consensus 238 ~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~---~~~~~g~~~~Ptvl~~~~~~ 314 (423)
|+|+++|+++++++++|+|.++++++||++++.++++++++++++++.|+++..++. .....|+|++|||+.. ++
T Consensus 320 d~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~l~~~~~~~~~~~~~g~f~~PTvl~~--~~ 397 (500)
T TIGR01238 320 DRVLTMIQGAMQELKVGVPHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSRACQHGTFVAPTLFEL--DD 397 (500)
T ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeeccCCCCCCCCCeeEcCEEEcc--CC
Confidence 999999999999999999999999999999999999999999999999999874432 1223689999999973 68
Q ss_pred ccccccccccCeeEEEecC--CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC--CCCCCCCCC
Q 014515 315 MLIAKDEIFGPVQSILKYK--DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF--DAAIPFGGY 390 (423)
Q Consensus 315 ~~~~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~--~~~~pfgG~ 390 (423)
+.++++|+||||++|++|+ ++||||+++|+++|||++||||+|.+.+.++++++++|.|+||+.... .+.+||||+
T Consensus 398 ~~~~~eE~FgPvl~v~~~~~~~~deai~~~N~~~~gLs~~vfT~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~ 477 (500)
T TIGR01238 398 IAELSEEVFGPVLHVVRYKARELDQIVDQINQTGYGLTMGVHSRIETTYRWIEKHARVGNCYVNRNQVGAVVGVQPFGGQ 477 (500)
T ss_pred chHhhCCCcCCEEEEEEeCCCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcc
Confidence 8899999999999999998 799999999999999999999999999999999999999999986543 355799999
Q ss_pred CCCCCC-CcchHHHHHhhheeeE
Q 014515 391 KQSGQG-REKGSYSLSNYLQVKA 412 (423)
Q Consensus 391 ~~SG~g-~~~g~~~l~~~~~~k~ 412 (423)
|+||+| +++|.+++++|++.|.
T Consensus 478 k~SG~G~~~gg~~~~~~~~~~k~ 500 (500)
T TIGR01238 478 GLSGTGPKAGGPHYLYRLTQVQY 500 (500)
T ss_pred ccccCCCccCCHHHHHHHHhhcC
Confidence 999999 7999999999999873
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase. |
| >PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-82 Score=681.09 Aligned_cols=413 Identities=35% Similarity=0.499 Sum_probs=384.8
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCc--cCCCCCCCceeEee
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL--TAPADGPYHVQTLH 78 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 78 (423)
+|.++|+++|+++++.|++++++|+.++++|+|||+.++.. |+..++++++|++..++...+. ..+...+..++..+
T Consensus 604 ~~~~~Ra~iL~kaAdll~~~~~eL~~l~~~E~GK~~~~a~~-EV~eaid~lr~ya~~a~~~~~~~~~l~g~~ge~n~~~~ 682 (1038)
T PRK11904 604 TPVEERAAILERAADLLEANRAELIALCVREAGKTLQDAIA-EVREAVDFCRYYAAQARRLFGAPEKLPGPTGESNELRL 682 (1038)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhhCCCcccCCCCCceeEEEE
Confidence 57899999999999999999999999999999999999875 9999999999999988776543 23444567889999
Q ss_pred ccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhccc
Q 014515 79 EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHM 158 (423)
Q Consensus 79 ~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~ 158 (423)
+|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|++.+++..|+.||
T Consensus 683 ~P~GVv~~IsPwNfPlai~~~~i~aALaaGNtVIlKPse~tpl~a~~l~~ll~eAGlP~gvl~lv~G~g~~vg~~Lv~~p 762 (1038)
T PRK11904 683 HGRGVFVCISPWNFPLAIFLGQVAAALAAGNTVIAKPAEQTPLIAAEAVKLLHEAGIPKDVLQLLPGDGATVGAALTADP 762 (1038)
T ss_pred ecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEeeCCCcCHHHHHHHHHHHHHhCcCcceEEEeeCCchHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999998888999999999
Q ss_pred CcceEeeecCchHHHHHHHHHhhC--CCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCcc
Q 014515 159 EVDKLAFTGSTTTGKIVLQLAAKS--NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 236 (423)
Q Consensus 159 ~v~~v~~tGs~~~~~~v~~~~a~~--~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~ 236 (423)
+++.|+||||+.+++.|.+.++.+ ..+|+++|+||||++||++|||++.|++.+++|+|.++||.|+++++||||+++
T Consensus 763 ~v~~V~FTGS~~~g~~I~~~~A~~~g~~~pvi~ElGGkNa~IV~~dAdld~Av~~iv~saF~~aGQ~CsA~~rl~V~~si 842 (1038)
T PRK11904 763 RIAGVAFTGSTETARIINRTLAARDGPIVPLIAETGGQNAMIVDSTALPEQVVDDVVTSAFRSAGQRCSALRVLFVQEDI 842 (1038)
T ss_pred CcCeEEEECCHHHHHHHHHHHhhccCCCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEeHHH
Confidence 999999999999999999988763 267999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC--CCCceeecEEEecCCCc
Q 014515 237 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDD 314 (423)
Q Consensus 237 ~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~--~~g~~~~Ptvl~~~~~~ 314 (423)
+|+|+++|+++++++++|+|.++++++||++++.+++++.++|+++++ |+++++||..++ ..|+|+.|||+.. ++
T Consensus 843 ~d~fl~~L~~~~~~l~vGdp~d~~t~~GPvI~~~a~~~l~~~I~~a~~-ga~vl~gg~~~~~~~~G~fv~PTvi~~--~~ 919 (1038)
T PRK11904 843 ADRVIEMLKGAMAELKVGDPRLLSTDVGPVIDAEAKANLDAHIERMKR-EARLLAQLPLPAGTENGHFVAPTAFEI--DS 919 (1038)
T ss_pred HHHHHHHHHHHHHhccCCCcccccCCccCCCCHHHHHHHHHHHHHHHc-CCEEEeCCCCCCCCCCceEEeeEEEcc--CC
Confidence 999999999999999999999999999999999999999999999876 899999997643 2589999999963 56
Q ss_pred ccccccccccCeeEEEecC--CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC--CCCCCCCCC
Q 014515 315 MLIAKDEIFGPVQSILKYK--DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF--DAAIPFGGY 390 (423)
Q Consensus 315 ~~~~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~--~~~~pfgG~ 390 (423)
+.++++|+||||++|++|+ +++|+|+++|+++|||+++|||+|.++++++++++++|.||||+..+. .+.+||||+
T Consensus 920 ~~~~~eEiFGPVL~V~~~~~~~ldeaI~~iN~t~yGLt~~IfS~d~~~~~~~~~~l~aG~vyIN~~~~ga~vg~qPFGG~ 999 (1038)
T PRK11904 920 ISQLEREVFGPILHVIRYKASDLDKVIDAINATGYGLTLGIHSRIEETADRIADRVRVGNVYVNRNQIGAVVGVQPFGGQ 999 (1038)
T ss_pred cHHhCCCCcCcEEEEEEeCCCCHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEEEEEEeCCCccCCCCCCCCCCC
Confidence 7789999999999999997 799999999999999999999999999999999999999999986543 355799999
Q ss_pred CCCCCC-CcchHHHHHhhheeeEEEEec
Q 014515 391 KQSGQG-REKGSYSLSNYLQVKAVVTAL 417 (423)
Q Consensus 391 ~~SG~g-~~~g~~~l~~~~~~k~v~~~~ 417 (423)
|.||+| +.+|++++++|++.|+|+++.
T Consensus 1000 ~~SG~G~kaGG~~~L~~f~~~ktv~~~~ 1027 (1038)
T PRK11904 1000 GLSGTGPKAGGPHYLLRFATEKTVTVNT 1027 (1038)
T ss_pred CCCCCCCccchHHHHHHHhceEEEEEcc
Confidence 999999 688999999999999998764
|
|
| >PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-82 Score=664.41 Aligned_cols=409 Identities=26% Similarity=0.351 Sum_probs=367.8
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhc--------CccCCCC--C
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ--------GLTAPAD--G 70 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~--------~~~~~~~--~ 70 (423)
+|..+|+++|+++++.|+++.++|++ +++|+|||+.++.. |+..+++.+++++.+++... ++..+.. .
T Consensus 60 ~~~~eR~~~L~~~a~~l~~~~~ela~-l~~e~GK~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~ 137 (675)
T PRK11563 60 LTFHERAAMLKALAKYLLERKEELYA-LSAQTGATRRDSWI-DIEGGIGTLFTYASKGRRELPNDTVLVEGEVEPLSKGG 137 (675)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHH-HHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHhhhccccccccCCccccccCCC
Confidence 57899999999999999999999998 58999999999886 99999999999998875542 2222211 1
Q ss_pred CCceeEeeccc-eeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcC-CCCCcEEEEeCCch
Q 014515 71 PYHVQTLHEPI-GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGP 148 (423)
Q Consensus 71 ~~~~~~~~~P~-Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag-~P~g~v~~v~~~~~ 148 (423)
....+..++|+ |||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.++| +|+|++|+++|+..
T Consensus 138 ~~~~~~~~~p~~GVv~~I~PwNfP~~~~~~~i~pALaaGN~VV~KPse~tp~~a~~l~~~~~eaG~~P~gv~~vv~g~~~ 217 (675)
T PRK11563 138 TFAGRHILTPLEGVAVHINAFNFPVWGMLEKLAPAFLAGVPAIVKPATATAYLTEAVVRLIVESGLLPEGALQLICGSAG 217 (675)
T ss_pred cccceEEEeecCceEEEECCCchHHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHcCCCCCCcEEEeeCCHH
Confidence 12246788997 99999999999999999999999999999999999999999999999999999 99999999998532
Q ss_pred hHHHHhhcccCcceEeeecCchHHHHHHHHH--hhCCCCceEEecCCcceEEEcCCCC-----HHHHHHHHHHHHHhccC
Q 014515 149 TAGAALASHMEVDKLAFTGSTTTGKIVLQLA--AKSNLKPVTLELGGKSPFIVCEDAD-----VDKAAELAHYALFFNQG 221 (423)
Q Consensus 149 ~~~~~l~~~~~v~~v~~tGs~~~~~~v~~~~--a~~~~~~~~~e~gg~~~~iv~~~ad-----~~~aa~~iv~~~~~~~G 221 (423)
..+..++.++.|.||||+++|+.|++.+ +. +++|+++|+|||||+||++||| ++.|++.+++++|.|+|
T Consensus 218 ---~~~~~~~~i~~v~FTGS~~~G~~i~~~~~a~~-~~~~~~lELGGknp~IV~~DAd~~~~dld~aa~~i~~~~f~~aG 293 (675)
T PRK11563 218 ---DLLDHLDGQDVVTFTGSAATAQKLRAHPNVVA-NSVPFTAEADSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAG 293 (675)
T ss_pred ---HHhhcCCCCCEEEEECcHHHHHHHHhhhhhhh-CCceEEEecCCcCceEECCCCCcCchhHHHHHHHHHHHHHHhCC
Confidence 3333446799999999999999999853 34 7899999999999999999995 99999999999999999
Q ss_pred CcccCCCeEEEeCccHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccc-----
Q 014515 222 QCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL----- 296 (423)
Q Consensus 222 q~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~----- 296 (423)
|.|++++|+|||+++||+|+++|+++++++++|+|.++++++||+++..+++++.++|++++++ +++++||...
T Consensus 294 Q~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vG~p~d~~t~~GPli~~~~~~~i~~~i~~a~~~-a~vl~Gg~~~~~~~~ 372 (675)
T PRK11563 294 QKCTAIRRAIVPRALVDAVIEALRARLAKVVVGDPRLEGVRMGALASLEQREDVREKVAALLAA-AEIVFGGPDSFEVVG 372 (675)
T ss_pred CccccceeEEeeHHHHHHHHHHHHHHHhcCccCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhC-CEEEECCcccccccC
Confidence 9999999999999999999999999999999999999999999999999999999999999998 9999999631
Q ss_pred --CCCCceeecEEEecCCC--cccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcc--e
Q 014515 297 --GAKGYYIKPTVFTGVKD--DMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALR--V 370 (423)
Q Consensus 297 --~~~g~~~~Ptvl~~~~~--~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~--~ 370 (423)
...|+|++|||+.++++ ++.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.+++++++ +
T Consensus 373 ~~~~~g~f~~PTvl~~v~~~~~~~i~~eEiFGPVl~V~~~~~~~eai~~aN~s~~gL~asvft~d~~~a~~~~~~l~~~~ 452 (675)
T PRK11563 373 ADAEKGAFFPPTLLYCDDPLEAPAVHDVEAFGPVSTLMPYDDLDEAIELAARGKGSLVASLVTADPEVARELVLGAAPWH 452 (675)
T ss_pred CCCCCCeeECCEEEeccCchhhhhHhhccccCCceEEEecCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHhcC
Confidence 13589999999999888 57899999999999999999999999999999999999999999999999999997 9
Q ss_pred eEEEEcCcCC-------C--CCCCCCCCCCCCCCCCc-chHHHHHhhheeeEEEEe
Q 014515 371 GSVWINCFDV-------F--DAAIPFGGYKQSGQGRE-KGSYSLSNYLQVKAVVTA 416 (423)
Q Consensus 371 g~v~iN~~~~-------~--~~~~pfgG~~~SG~g~~-~g~~~l~~~~~~k~v~~~ 416 (423)
|.||||+.+. . .+.+||||+|.||+|++ +|.+++++|++.|++...
T Consensus 453 G~v~iN~~~~~~~~~~~~~~~~~~pfGG~k~SG~G~~~~g~~~~~~f~~~k~~~~~ 508 (675)
T PRK11563 453 GRLLVLNRESAKESTGHGSPLPQLVHGGPGRAGGGEELGGLRGVKHYMQRTAVQGS 508 (675)
T ss_pred CEEEEcCccccccccCCCCCCcCCCcCCCCCCCCCccccchhHHHHhheeeeeecC
Confidence 9999997531 1 25789999999999999 579999999999987544
|
|
| >cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-81 Score=631.90 Aligned_cols=403 Identities=33% Similarity=0.490 Sum_probs=370.1
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCcc-C--C-CCCCCceeE
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT-A--P-ADGPYHVQT 76 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~-~--~-~~~~~~~~~ 76 (423)
+|..+|+++|+++++.|++++++|++++++|+|||..++...|+..+++.+++++...+...... . + ...+...+.
T Consensus 17 ~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~~~~~Ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (426)
T cd07087 17 RSLEWRKAQLKALKRMLTENEEEIAAALYADLGKPPAEAYLTEIAVVLGEIDHALKHLKKWMKPRRVSVPLLLQPAKAYV 96 (426)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccCCccccCCCceEE
Confidence 58899999999999999999999999999999999877765699999999999988766543321 1 1 112345688
Q ss_pred eeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhc
Q 014515 77 LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALAS 156 (423)
Q Consensus 77 ~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~ 156 (423)
+++|+|||++|+|||+|+...++++++||++||+||+|||+.+|.++..+.+++.+ |+|+|+++++++ +.+.+..|+.
T Consensus 97 ~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlKps~~~p~~~~~l~~~~~~-~~P~gv~~vv~g-~~~~~~~l~~ 174 (426)
T cd07087 97 IPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATSALLAKLIPK-YFDPEAVAVVEG-GVEVATALLA 174 (426)
T ss_pred EEecCcEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH-hCCCCEEEEEeC-CchHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999 699999999998 4456888999
Q ss_pred ccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCcc
Q 014515 157 HMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 236 (423)
Q Consensus 157 ~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~ 236 (423)
|+ ++.|+||||+++++.|.+.++. +++|+++|+|||||+||++|+|++.|++.+++++|.++||.|+++++||||+++
T Consensus 175 ~~-v~~V~ftGs~~~g~~i~~~a~~-~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i 252 (426)
T cd07087 175 EP-FDHIFFTGSPAVGKIVMEAAAK-HLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFLNAGQTCIAPDYVLVHESI 252 (426)
T ss_pred CC-CCEEEEeCChHHHHHHHHHHHh-hCCceEEeccCCCceEecCCCCHHHHHHHHHHHHHhccCCccccCCEEEEcHHH
Confidence 98 9999999999999999998887 789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCccc
Q 014515 237 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDML 316 (423)
Q Consensus 237 ~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~ 316 (423)
+|+|+++|++.+++++.|+| ++++++||+++..+++++.++++++ ++++||... ..|+|++|||+.+++++|+
T Consensus 253 ~d~f~~~L~~~~~~l~~~~~-~~~~~~gpli~~~~~~~~~~~i~~a-----~v~~gg~~~-~~g~~~~Ptvl~~~~~~~~ 325 (426)
T cd07087 253 KDELIEELKKAIKEFYGEDP-KESPDYGRIINERHFDRLASLLDDG-----KVVIGGQVD-KEERYIAPTILDDVSPDSP 325 (426)
T ss_pred HHHHHHHHHHHHHHHcCCCC-ccCCCcCCCCCHHHHHHHHHHHhcc-----eEEeCCccC-CCCCEEeeEEEecCCCCCH
Confidence 99999999999999986666 5788999999999999999999864 788898753 3589999999999999999
Q ss_pred ccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC--CCCCCCCCCCCCCC
Q 014515 317 IAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSG 394 (423)
Q Consensus 317 ~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~pfgG~~~SG 394 (423)
+++||+||||++|++|+|++|||+++|+++|||++||||+|.++++++++++++|+|+||+.+. ..+.+||||+|.||
T Consensus 326 ~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG 405 (426)
T cd07087 326 LMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLFSEDKAVQERVLAETSSGGVCVNDVLLHAAIPNLPFGGVGNSG 405 (426)
T ss_pred HHhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHhcCCcccEEECCcccccCCCCCCCCCCCccc
Confidence 9999999999999999999999999999999999999999999999999999999999998753 34789999999999
Q ss_pred CCCcchHHHHHhhheeeEEE
Q 014515 395 QGREKGSYSLSNYLQVKAVV 414 (423)
Q Consensus 395 ~g~~~g~~~l~~~~~~k~v~ 414 (423)
+|+++|.+++++||+.|+++
T Consensus 406 ~G~~~g~~~l~~~~~~k~~~ 425 (426)
T cd07087 406 MGAYHGKAGFDTFSHLKSVL 425 (426)
T ss_pred CCCccCHHHHHHhccceeec
Confidence 99999999999999999873
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. |
| >KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-82 Score=591.57 Aligned_cols=405 Identities=28% Similarity=0.419 Sum_probs=371.1
Q ss_pred CHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcC----ccCCCCCCCceeEe
Q 014515 2 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG----LTAPADGPYHVQTL 77 (423)
Q Consensus 2 ~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~ 77 (423)
|.+.|.++|+++..++++|.+++.+++.+|.+|+..++...|+...++.++++....++... ...........+.+
T Consensus 22 ~~efR~~QL~~L~r~i~e~e~~i~~Al~~DL~k~~~es~~~Ev~~~~~~i~~~l~~L~~wv~~~~v~~~~~t~~dk~~I~ 101 (477)
T KOG2456|consen 22 PLEFRKQQLEALYRMIQENEKEIIEALAADLHKPELESYLNEVGYVLNEIRYALENLPEWVKPEPVKKSFLTFLDKAYIE 101 (477)
T ss_pred ChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhHHhccccccCcccccccCceeEE
Confidence 57899999999999999999999999999999999999888999999988888765544332 22222334578899
Q ss_pred eccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcc
Q 014515 78 HEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH 157 (423)
Q Consensus 78 ~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~ 157 (423)
.+|+|||++|+|||||+...+.++++||+|||+||+|||+.+|.++..+++++.++ ++.+.+.++.|.-+ ....|+.+
T Consensus 102 ~~p~GvVLiI~~wNyP~~L~l~PligAiAAGN~VVlKPSEls~n~a~~lakllp~Y-ld~~~~~VV~Ggv~-ETt~LL~~ 179 (477)
T KOG2456|consen 102 KEPLGVVLIIGPWNYPLNLTLVPLIGAIAAGNAVVLKPSELSPNTAKLLAKLLPQY-LDQDLIRVVNGGVP-ETTELLKQ 179 (477)
T ss_pred ecCCceEEEEccCCCcceeehhhhhhhhhcCCEEEechhhcChhHHHHHHHHHHHh-cCcceEEEecCCCc-hHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999 99999999999444 45556665
Q ss_pred cCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccH
Q 014515 158 MEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 237 (423)
Q Consensus 158 ~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~ 237 (423)
+.|.|+||||+.+|+.|+.++++ +++||++|+|||+|++|++|+|++-++++|+|+++.|+||.|.+|++|+++.+++
T Consensus 180 -rfD~IfyTGsp~VgkIim~aAaK-hLTPvtLELGGKsP~~vd~~~d~~ia~~RI~~gk~~N~GQtCvapDYiL~~k~~~ 257 (477)
T KOG2456|consen 180 -RFDHIFYTGSPRVGKIIMAAAAK-HLTPVTLELGGKSPCYVDKNCDLKIAARRIAWGKWMNSGQTCVAPDYILCSKSIQ 257 (477)
T ss_pred -hccEEEecCCchHHHHHHHHHHh-cCCcEEEEcCCCCCeeecCCcCHHHHHHHHHHHhhccCCCeeccCCeEEecHhhh
Confidence 89999999999999999999998 9999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCcccc
Q 014515 238 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLI 317 (423)
Q Consensus 238 ~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~ 317 (423)
++++++++..++++ .|....++.+++.+++..|++|+.+++++. .++..||+. +....+++|||+.++++++++
T Consensus 258 ~kli~alk~~l~eF-YG~n~~eS~d~sRiIn~~hf~Rl~~ll~~~----~kv~~Gg~~-d~~d~~I~PTIL~DV~~~~p~ 331 (477)
T KOG2456|consen 258 PKLIDALKSTLKEF-YGENPKESKDLSRIINQRHFQRLSALLDET----GKVAIGGES-DESDRYIAPTILLDVPEDSPV 331 (477)
T ss_pred HHHHHHHHHHHHHH-hCCCccccccHHHHhhHHHHHHHHHHhcCC----CceecCCcc-chhhcccCCeEEecCCCCChh
Confidence 99999999999886 577778889999999999999999999753 688889985 345679999999999999999
Q ss_pred cccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCc--CCCCCCCCCCCCCCCCC
Q 014515 318 AKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCF--DVFDAAIPFGGYKQSGQ 395 (423)
Q Consensus 318 ~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~--~~~~~~~pfgG~~~SG~ 395 (423)
|+||+|||||+|+.|+|++|+|+++|+.+-+|++|+||+|.+..+++.+++.+|.|.+|+. +.....+||||+|.||+
T Consensus 332 M~eEIFGPiLPIi~v~~l~Eai~~In~~eKPLa~Y~Fs~n~~~vkr~l~~tsSGgvt~ND~i~H~~~~~lPFGGVG~SGm 411 (477)
T KOG2456|consen 332 MQEEIFGPILPIITVQSLDEAINFINEREKPLALYIFSNNEKLVKRFLTETSSGGVTVNDVIMHVTLDSLPFGGVGESGM 411 (477)
T ss_pred hhhhhccCccceeEhhhHHHHHHHHhcCCCceEEEEecCCHHHHHHHHHhccCCCeeecceEEEEEeeccCcCCcCcccc
Confidence 9999999999999999999999999999999999999999999999999999999999985 44557899999999999
Q ss_pred CCcchHHHHHhhheeeEEEEe
Q 014515 396 GREKGSYSLSNYLQVKAVVTA 416 (423)
Q Consensus 396 g~~~g~~~l~~~~~~k~v~~~ 416 (423)
|++||.+|++.|++.|++..+
T Consensus 412 G~YhGK~sFdTFSH~k~~l~r 432 (477)
T KOG2456|consen 412 GRYHGKFSFDTFSHEKSCLLR 432 (477)
T ss_pred ccccccccccccccchhhhhc
Confidence 999999999999999998765
|
|
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-79 Score=667.89 Aligned_cols=398 Identities=32% Similarity=0.488 Sum_probs=370.2
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
+|.++|+++|+++++.|++++++|+.++++|+|||+.++.. |+..++++++||+..++.... ...++|
T Consensus 701 ~p~~eRa~iL~r~Adlle~~~~eL~~l~~~EaGKt~~~A~~-EV~eaidflryyA~~a~~~~~-----------~~~~~P 768 (1318)
T PRK11809 701 TPPAERAAILERAADLMEAQMQTLMGLLVREAGKTFSNAIA-EVREAVDFLRYYAGQVRDDFD-----------NDTHRP 768 (1318)
T ss_pred CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcC-----------Cceeec
Confidence 57899999999999999999999999999999999999875 999999999999987654211 245899
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 160 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v 160 (423)
+|||++|+|||||+...++++++||++||+||+|||+.+|+++..++++++++|+|+|++|+++|.+.+++..|+.||+|
T Consensus 769 lGVV~~IsPWNFPlai~~g~iaaALaAGN~VV~KPseqTpl~a~~lv~ll~eAGlP~gvlqlv~G~g~~vg~~Lv~~p~V 848 (1318)
T PRK11809 769 LGPVVCISPWNFPLAIFTGQVAAALAAGNSVLAKPAEQTPLIAAQAVRILLEAGVPAGVVQLLPGRGETVGAALVADARV 848 (1318)
T ss_pred ccEEEEECCCccHHHHHHHHHHHHHHcCCeEEEeCCCCcHHHHHHHHHHHHHhCcCcCeEEEeeCCcHHHHHHHhcCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999888899999999999
Q ss_pred ceEeeecCchHHHHHHHHHhhC-----CCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCc
Q 014515 161 DKLAFTGSTTTGKIVLQLAAKS-----NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES 235 (423)
Q Consensus 161 ~~v~~tGs~~~~~~v~~~~a~~-----~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~ 235 (423)
++|+||||+++|+.|.+.++.+ ..+|+++|+||+|++||++|||+|.|++.+++|+|.++||.|++++++|||++
T Consensus 849 ~~V~FTGSt~tg~~I~~~aA~~l~~~g~~~pliaElGGkNa~IVdsdAdle~Av~~iv~sAF~~aGQrCsA~~rl~V~e~ 928 (1318)
T PRK11809 849 RGVMFTGSTEVARLLQRNLAGRLDPQGRPIPLIAETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRCSALRVLCLQDD 928 (1318)
T ss_pred CEEEEeCCHHHHHHHHHHHhhhcccccCceeEEEecCCccceEECCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEcHH
Confidence 9999999999999999988762 12799999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC---CCCceeecEEEecCC
Q 014515 236 VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG---AKGYYIKPTVFTGVK 312 (423)
Q Consensus 236 ~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~---~~g~~~~Ptvl~~~~ 312 (423)
++|+|+++|++.++++++|+|.+.++++||++++.+++++.++|++++++|++++.++...+ ..|+|++|||+..
T Consensus 929 Iad~fl~~L~~a~~~l~vGdP~~~~tdvGPvId~~a~~~i~~~I~~a~~~G~~v~~g~~~~~~~~~~G~fv~PTIi~~-- 1006 (1318)
T PRK11809 929 VADRTLKMLRGAMAECRMGNPDRLSTDIGPVIDAEAKANIERHIQAMRAKGRPVFQAARENSEDWQSGTFVPPTLIEL-- 1006 (1318)
T ss_pred HHHHHHHHHHHHHHhcCCCCcccccCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCCCCCCCCCCCeEEeeEEEec--
Confidence 99999999999999999999999999999999999999999999999999999998875432 4599999999974
Q ss_pred CcccccccccccCeeEEEecC--CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCC--CCCCCC
Q 014515 313 DDMLIAKDEIFGPVQSILKYK--DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFD--AAIPFG 388 (423)
Q Consensus 313 ~~~~~~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~--~~~pfg 388 (423)
+++.++++|+||||++|++|+ +++|+|+++|.++|||+++|||+|.++++++.+++++|.||||+..... ..+|||
T Consensus 1007 ~~~~~l~eEiFGPVL~V~~~~~~~ldeaI~~iN~t~yGLt~gV~Srd~~~~~~v~~~l~aGnvyINr~~~gavvg~qPFG 1086 (1318)
T PRK11809 1007 DSFDELKREVFGPVLHVVRYNRNQLDELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFG 1086 (1318)
T ss_pred cchhhhcCcccCceEEEEEeCCCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHhCCEeEEEECCCCcCCCcCCCCCC
Confidence 567789999999999999996 7999999999999999999999999999999999999999999865432 457999
Q ss_pred CCCCCCCC-CcchHHHHHhhheeeE
Q 014515 389 GYKQSGQG-REKGSYSLSNYLQVKA 412 (423)
Q Consensus 389 G~~~SG~g-~~~g~~~l~~~~~~k~ 412 (423)
|+|.||+| +.+|++++.+|++.+.
T Consensus 1087 G~g~SG~G~kaGGp~yL~~f~~~~~ 1111 (1318)
T PRK11809 1087 GEGLSGTGPKAGGPLYLYRLLATRP 1111 (1318)
T ss_pred CcCcCCCCCCCCCHHHHHHHhccCC
Confidence 99999999 5899999999999763
|
|
| >cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-78 Score=613.18 Aligned_cols=412 Identities=51% Similarity=0.842 Sum_probs=388.2
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCcc-CCCCCCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT-APADGPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|.++.++|++++++|+||+..+.. .|+..+++.+++++...++..+.. .....+...+.+++
T Consensus 17 ~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~etG~~~~~~~-~ei~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (432)
T cd07078 17 LPPAERAAILRKLADLLEERREELAALETLETGKPIEEAL-GEVARAADTFRYYAGLARRLHGEVIPSPDPGELAIVRRE 95 (432)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEe
Confidence 5789999999999999999999999999999999988765 499999999999988877655443 23334567889999
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccC
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 159 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~ 159 (423)
|+|||++|+|||+|+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+++++++++++++....|..|++
T Consensus 96 P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~~ag~p~~~~~~~~~~~~~~~~~l~~~~~ 175 (432)
T cd07078 96 PLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVLNVVTGDGDEVGAALASHPR 175 (432)
T ss_pred ecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcCcEEEEecCchHHHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999876668899999999
Q ss_pred cceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHH
Q 014515 160 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239 (423)
Q Consensus 160 v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~ 239 (423)
+|.|.||||..+++.|.+.+++ +++|+++|+||++++||++|+|++.|++.+++++|.++||.|+++++||||++++++
T Consensus 176 i~~v~ftGs~~~~~~v~~~a~~-~~~~~~~e~gg~~~~iV~~~ad~~~aa~~i~~~~~~~~Gq~C~a~~~i~v~~~~~~~ 254 (432)
T cd07078 176 VDKISFTGSTAVGKAIMRAAAE-NLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAGQVCTAASRLLVHESIYDE 254 (432)
T ss_pred CCEEEEECcHHHHHHHHHHHhh-ccCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcHHHHHH
Confidence 9999999999999999999887 789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCC-CCceeecEEEecCCCccccc
Q 014515 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA-KGYYIKPTVFTGVKDDMLIA 318 (423)
Q Consensus 240 f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~-~g~~~~Ptvl~~~~~~~~~~ 318 (423)
|+++|++++.++++|+|.|+++++||++++++++++.++++++.++|+++++||...+. .|.|++|||+.+++++++++
T Consensus 255 ~~~~L~~~l~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~gg~~~~~~~g~~~~Ptv~~~~~~~~~~~ 334 (432)
T cd07078 255 FVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGAKLLCGGKRLEGGKGYFVPPTVLTDVDPDMPIA 334 (432)
T ss_pred HHHHHHHHHHccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCcEEccEEEecCCCCChhh
Confidence 99999999999999999999999999999999999999999999999999999976433 58999999999999999999
Q ss_pred ccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC-CCCCCCCCCCCCCCCC
Q 014515 319 KDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGR 397 (423)
Q Consensus 319 ~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~pfgG~~~SG~g~ 397 (423)
++|+||||++|++|++++|||+++|+.++||++||||+|.+.++++++++++|+|+||+.+.. .+.+||||.|.||+|+
T Consensus 335 ~~E~fgPvl~v~~~~~~~eai~~~n~~~~~l~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~sg~g~ 414 (432)
T cd07078 335 QEEIFGPVLPVIPFKDEEEAIELANDTEYGLAAGVFTRDLERALRVAERLEAGTVWINDYSVGAEPSAPFGGVKQSGIGR 414 (432)
T ss_pred hCCCcCceEEEEEeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCcCCcCcCcCCc
Confidence 999999999999999999999999999999999999999999999999999999999998776 7889999999999999
Q ss_pred cchHHHHHhhheeeEEE
Q 014515 398 EKGSYSLSNYLQVKAVV 414 (423)
Q Consensus 398 ~~g~~~l~~~~~~k~v~ 414 (423)
++|++|+++|++.|+++
T Consensus 415 ~~g~~~~~~~~~~k~v~ 431 (432)
T cd07078 415 EGGPYGLEEYTEPKTVT 431 (432)
T ss_pred cchHHHHHHhhceEEEE
Confidence 99999999999999874
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer |
| >cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-78 Score=613.20 Aligned_cols=389 Identities=25% Similarity=0.305 Sum_probs=349.9
Q ss_pred CHHHH----HHHHHHHHHHHHHc--HHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccC--CC-CCCC
Q 014515 2 TAYER----SKIILRFADLLERH--NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA--PA-DGPY 72 (423)
Q Consensus 2 ~~~~R----~~~L~~la~~l~~~--~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~--~~-~~~~ 72 (423)
+..+| .++|+++++.|+++ .++|++++++|+|||+.++.. |+..+++.+++++...++..+... +. ..+.
T Consensus 56 ~~~~R~l~~~~il~~~a~~l~~~~~~~~la~~~~~e~GK~~~~a~~-Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~ 134 (489)
T cd07126 56 KNPERYLLYGDVSHRVAHELRKPEVEDFFARLIQRVAPKSDAQALG-EVVVTRKFLENFAGDQVRFLARSFNVPGDHQGQ 134 (489)
T ss_pred CHHHHhhhHHHHHHHHHHHHHcCCCHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCceeccCCCCCCc
Confidence 56789 89999999999998 599999999999999999875 999999999999988766554432 21 1244
Q ss_pred ceeEeeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHH
Q 014515 73 HVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGA 152 (423)
Q Consensus 73 ~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~ 152 (423)
..+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.+|.+++.++|+|+|++|+++|.+.+ +.
T Consensus 135 ~~~v~r~P~GVV~~I~PwNfP~~l~~~~ia~ALaaGN~VVlKPSe~tp~~~~~l~~~~~~aGlP~gv~~vv~G~~~~-~~ 213 (489)
T cd07126 135 QSSGYRWPYGPVAIITPFNFPLEIPALQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLHLCGMPATDVDLIHSDGPT-MN 213 (489)
T ss_pred eeEEEEecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCcCcCcEEEEeCCchh-HH
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999986555 45
Q ss_pred HhhcccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCC-CHHHHHHHHHHHHHhccCCcccCCCeEE
Q 014515 153 ALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDA-DVDKAAELAHYALFFNQGQCCCAGSRTF 231 (423)
Q Consensus 153 ~l~~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~a-d~~~aa~~iv~~~~~~~Gq~C~a~~~v~ 231 (423)
.++.|+++++|+||||+++|+.|...++ +++.+|+||+||+||++|+ |++.|++.+++++|.|+||.|++++|+|
T Consensus 214 ~l~~~~~v~~V~FTGS~~vGr~i~~~~g----~k~~lElgg~~~~IV~~Da~dld~a~~~~~~g~f~naGQ~C~a~~rv~ 289 (489)
T cd07126 214 KILLEANPRMTLFTGSSKVAERLALELH----GKVKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILF 289 (489)
T ss_pred HHhcCCCCCEEEEECCHHHHHHHHHHhC----CCEEeecCCCCceEECCCcccHHHHHHHHHHHHHhcCCCcCCCCceEE
Confidence 5788899999999999999999988755 4689999999999999999 9999999999999999999999999999
Q ss_pred EeCcc-HHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHh-CCCEEEeCCcccCC----CC-ceee
Q 014515 232 VHESV-YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVD-GGAKLETGGERLGA----KG-YYIK 304 (423)
Q Consensus 232 V~~~~-~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~-~ga~~~~gg~~~~~----~g-~~~~ 304 (423)
||+++ +|+|+++|++.++++++|+ +++||+++.. .+++.++++++++ +|+++++||...+. .+ .|++
T Consensus 290 V~~~i~~d~f~~~l~~~~~~~~~g~-----~~~Gpli~~~-~~~v~~~i~~a~~~~Ga~~l~GG~~~~~~~~~~~~~~~~ 363 (489)
T cd07126 290 AHENWVQAGILDKLKALAEQRKLED-----LTIGPVLTWT-TERILDHVDKLLAIPGAKVLFGGKPLTNHSIPSIYGAYE 363 (489)
T ss_pred EeCcchHHHHHHHHHHHHHhcccCC-----CcCCCCcCHH-HHHHHHHHHHHHhCCCCEEEeCCcccccccccCCcceec
Confidence 99995 6899999999999999875 4899999998 8999999999997 89999999976432 23 3899
Q ss_pred cEEEec------CCCcccccccccccCeeEEEecCC--HHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeE--EE
Q 014515 305 PTVFTG------VKDDMLIAKDEIFGPVQSILKYKD--LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGS--VW 374 (423)
Q Consensus 305 Ptvl~~------~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~--v~ 374 (423)
|||+.. ++++|++++||+||||++|++|+| +|||++++|+++|||++||||+|.++++++++++++|. |+
T Consensus 364 PTvl~~~~~~~~~~~~~~i~~eEiFGPVl~V~~~~~~~~deai~~aN~~~~gL~~~vft~d~~~~~~~~~~~~~G~~~v~ 443 (489)
T cd07126 364 PTAVFVPLEEIAIEENFELVTTEVFGPFQVVTEYKDEQLPLVLEALERMHAHLTAAVVSNDIRFLQEVLANTVNGTTYAG 443 (489)
T ss_pred CeEEEeccccccCCCCCHHHhCCCcCCEEEEEEECCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEEE
Confidence 999852 567999999999999999999999 99999999999999999999999999999999999999 66
Q ss_pred EcCcCCCCCC----CCCCCCCCCCCCCcchHH
Q 014515 375 INCFDVFDAA----IPFGGYKQSGQGREKGSY 402 (423)
Q Consensus 375 iN~~~~~~~~----~pfgG~~~SG~g~~~g~~ 402 (423)
||+.++..+. .||||+|.||+|+++...
T Consensus 444 ~n~~~~~~~~~~~~~pfgg~k~sg~g~~~~~~ 475 (489)
T cd07126 444 IRARTTGAPQNHWFGPAGDPRGAGIGTPEAIR 475 (489)
T ss_pred ecCCCCCCCcccCcCCCCCCcccCCCCHhHHH
Confidence 8887665544 899999999999987553
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. |
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-78 Score=663.23 Aligned_cols=402 Identities=32% Similarity=0.488 Sum_probs=374.5
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
+|.++|+++|+++++.|++++++|+.++++|+||++.++.. |+..++++++|++..++.... ...++|
T Consensus 609 ~~~~~Ra~iL~raAdll~~~~~eL~~l~~~E~GKt~~ea~~-Ev~eaid~lr~ya~~a~~~~~-----------~~~~~P 676 (1208)
T PRK11905 609 TPAAERAAILERAADLMEAHMPELFALAVREAGKTLANAIA-EVREAVDFLRYYAAQARRLLN-----------GPGHKP 676 (1208)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcC-----------CceecC
Confidence 57899999999999999999999999999999999999875 999999999999987765432 135689
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 160 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v 160 (423)
+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.++|.++|+|+|++|+++|++.+.+..|+.||+|
T Consensus 677 ~GVv~~IsPwNfPlai~~g~i~aALaaGN~VV~KPse~tpl~a~~l~~ll~eAGlP~gvl~lV~G~g~~vg~~Lv~~p~v 756 (1208)
T PRK11905 677 LGPVVCISPWNFPLAIFTGQIAAALVAGNTVLAKPAEQTPLIAARAVRLLHEAGVPKDALQLLPGDGRTVGAALVADPRI 756 (1208)
T ss_pred ccEEEEEcCCcCHHHHHHHHHHHHHHcCCEEEEeCCcccHHHHHHHHHHHHHcCCCcccEEEeeCCchHHHHHHHcCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999888899999999999
Q ss_pred ceEeeecCchHHHHHHHHHhhC--CCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHH
Q 014515 161 DKLAFTGSTTTGKIVLQLAAKS--NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 238 (423)
Q Consensus 161 ~~v~~tGs~~~~~~v~~~~a~~--~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~ 238 (423)
+.|+||||+.+++.|.+.++.+ ..+|+++|+||||++||++|||++.|++.+++|+|.++||.|++++++|||++++|
T Consensus 757 ~~V~FTGSt~vg~~I~~~~A~~~~~~~pli~ElGGkN~~IV~~dAdle~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d 836 (1208)
T PRK11905 757 AGVMFTGSTEVARLIQRTLAKRSGPPVPLIAETGGQNAMIVDSSALPEQVVADVIASAFDSAGQRCSALRVLCLQEDVAD 836 (1208)
T ss_pred CEEEEeCCHHHHHHHHHHHHhhcCCCCeEEEecCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEehhHHH
Confidence 9999999999999999998873 25899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC-CCCceeecEEEecCCCcccc
Q 014515 239 QFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-AKGYYIKPTVFTGVKDDMLI 317 (423)
Q Consensus 239 ~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~ 317 (423)
+|+++|+++++++++|+|.+.++++||++++.+++++.++|+++++.|+.++.++...+ ..|+|+.|||+.. +++.+
T Consensus 837 ~f~e~L~~~~~~l~vGdP~d~~t~~GPvId~~a~~~i~~~I~~a~~~G~~l~~g~~~~~~~~G~fv~PTVl~~--~~~~~ 914 (1208)
T PRK11905 837 RVLTMLKGAMDELRIGDPWRLSTDVGPVIDAEAQANIEAHIEAMRAAGRLVHQLPLPAETEKGTFVAPTLIEI--DSISD 914 (1208)
T ss_pred HHHHHHHHHHHHhcCCCchhccCCccCccCHHHHHHHHHHHHHHHHCCCEEEEccCCCCCCCCeEEeeEEEec--CChHH
Confidence 99999999999999999999999999999999999999999999999998887764322 4689999999973 56788
Q ss_pred cccccccCeeEEEecC--CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCC--CCCCCCCCCCC
Q 014515 318 AKDEIFGPVQSILKYK--DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFD--AAIPFGGYKQS 393 (423)
Q Consensus 318 ~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~--~~~pfgG~~~S 393 (423)
+++|+||||++|++|+ +++|+|+++|+++|||+++|||+|.+.++++.+++++|.||||+..+.. ..+||||+|.|
T Consensus 915 ~~eEiFGPVL~V~~y~~~dldeaI~~iN~t~yGLt~~I~S~d~~~~~~~~~~l~aGnvyIN~~~~ga~vg~qPFGG~~~S 994 (1208)
T PRK11905 915 LEREVFGPVLHVVRFKADELDRVIDDINATGYGLTFGLHSRIDETIAHVTSRIRAGNIYVNRNIIGAVVGVQPFGGEGLS 994 (1208)
T ss_pred hcCCccCceEEEEEeCCCCHHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhCCEeEEEECCCCCCCccCCCCCCCCCCC
Confidence 9999999999999997 7999999999999999999999999999999999999999999865543 45799999999
Q ss_pred CCC-CcchHHHHHhhheeeEEEEe
Q 014515 394 GQG-REKGSYSLSNYLQVKAVVTA 416 (423)
Q Consensus 394 G~g-~~~g~~~l~~~~~~k~v~~~ 416 (423)
|+| +.+|++++++|++.|++++.
T Consensus 995 G~G~kaGGp~~L~~f~~~k~v~~~ 1018 (1208)
T PRK11905 995 GTGPKAGGPLYLGRLVREAPTPIP 1018 (1208)
T ss_pred CCCCcCCCHHHHHHHhhcceeecc
Confidence 999 49999999999999998764
|
|
| >cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-77 Score=605.44 Aligned_cols=398 Identities=23% Similarity=0.331 Sum_probs=357.2
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhc--CccCCC-------CCC
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ--GLTAPA-------DGP 71 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~--~~~~~~-------~~~ 71 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++. .|+..+++.+++++..++... +..... ..+
T Consensus 18 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~~~~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (454)
T cd07129 18 LSPARRAAFLEAIADEIEALGDELVARAHAETGLPEARLQ-GELGRTTGQLRLFADLVREGSWLDARIDPADPDRQPLPR 96 (454)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHHHH-HHHHHHHHHHHHHHHHHHhcCCccccccccccccCCCCC
Confidence 5789999999999999999999999999999999998876 499999999999988765422 111110 112
Q ss_pred CceeEeeccceeEEEEccCchhHHh--HHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHH----HcCCCCCcEEEEeC
Q 014515 72 YHVQTLHEPIGVAGQIIPWNFPLLM--FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH----EAGLPPGVLNIVSG 145 (423)
Q Consensus 72 ~~~~~~~~P~Gvv~~i~p~n~P~~~--~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~----~ag~P~g~v~~v~~ 145 (423)
...+.+++|+|||++|+|||||+.. .++++++||++||+||+|||+.+|.++.++.+++. ++|+|+|++|+++|
T Consensus 97 ~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~a~ALaaGN~VVlKps~~~p~t~~~l~~~~~~~l~~aGlP~gvv~~v~g 176 (454)
T cd07129 97 PDLRRMLVPLGPVAVFGASNFPLAFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAIRAALRATGLPAGVFSLLQG 176 (454)
T ss_pred ccceEEeeccceEEEECCCCCchhhhhhhhhHHHHHHcCCeEEEEcCCCCchHHHHHHHHHHHHHHHhCCChhheEEeeC
Confidence 3457889999999999999999987 45899999999999999999999999999888764 88999999999998
Q ss_pred CchhHHHHhhcccCcceEeeecCchHHHHHHHHHhhC-CCCceEEecCCcceEEEcCCC---CHHHHHHHHHHHHHhccC
Q 014515 146 YGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS-NLKPVTLELGGKSPFIVCEDA---DVDKAAELAHYALFFNQG 221 (423)
Q Consensus 146 ~~~~~~~~l~~~~~v~~v~~tGs~~~~~~v~~~~a~~-~~~~~~~e~gg~~~~iv~~~a---d~~~aa~~iv~~~~~~~G 221 (423)
++.+.+..|+.|++++.|+||||+.+|+.|++.++++ +++|+++|+|||||+||++|+ |++.|++.+++++|.|+|
T Consensus 177 ~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~p~~lElGG~n~~iV~~da~~~dl~~aa~~i~~~~~~~~G 256 (454)
T cd07129 177 GGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNPVFILPGALAERGEAIAQGFVGSLTLGAG 256 (454)
T ss_pred CcHHHHHHHhcCCCccEEEEeCChHHHHHHHHHhhccCccceeEeecCCcCcEEEeCCcchHHHHHHHHHHHHHHhcCCC
Confidence 7767899999999999999999999999999988863 589999999999999999999 899999999999999999
Q ss_pred CcccCCCeEEEeCc-cHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhC-CCEEEeCCcccCCC
Q 014515 222 QCCCAGSRTFVHES-VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG-GAKLETGGERLGAK 299 (423)
Q Consensus 222 q~C~a~~~v~V~~~-~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~-ga~~~~gg~~~~~~ 299 (423)
|.|+++++||||++ ++|+|+++|.++++++++ ||++++.+.++..+.+++++++ |+++++||... .+
T Consensus 257 Q~C~a~~rv~v~~~~i~d~f~~~l~~~~~~~~~----------g~~~~~~~~~~~~~~i~~a~~~~ga~~l~gg~~~-~~ 325 (454)
T cd07129 257 QFCTNPGLVLVPAGPAGDAFIAALAEALAAAPA----------QTMLTPGIAEAYRQGVEALAAAPGVRVLAGGAAA-EG 325 (454)
T ss_pred CeecCCceEEEeCcccHHHHHHHHHHHHhccCC----------CCCcChHHHHHHHHHHHHHHhcCCcEEEeCCCcC-CC
Confidence 99999999999999 999999999999998865 4677777888888999999998 99999999754 46
Q ss_pred CceeecEEEecCC---CcccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCC--HHHHHHHHHhc--ceeE
Q 014515 300 GYYIKPTVFTGVK---DDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN--LDTANTLMRAL--RVGS 372 (423)
Q Consensus 300 g~~~~Ptvl~~~~---~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d--~~~~~~~~~~l--~~g~ 372 (423)
|+|++|||+.... +++.++++|+||||++|++|+|.||+|+++|++.|||++||||+| .+++.+++.+| ++|+
T Consensus 326 g~~~~Ptvl~~~~~~~~~~~i~~~E~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~a~~~~~~l~~~~G~ 405 (454)
T cd07129 326 GNQAAPTLFKVDAAAFLADPALQEEVFGPASLVVRYDDAAELLAVAEALEGQLTATIHGEEDDLALARELLPVLERKAGR 405 (454)
T ss_pred CCccCCEEEEccCCccccchhhcccCCCCeEEEEEeCCHHHHHHHHhcCCCCcEEEEEccCchHHHHHHHHHHHHhhCcE
Confidence 8999999998655 689999999999999999999999999999999999999999999 79999999999 6999
Q ss_pred EEEcCcCCCC---CCCCCCC-CCCCCCCCc--chHHHHHhhhee
Q 014515 373 VWINCFDVFD---AAIPFGG-YKQSGQGRE--KGSYSLSNYLQV 410 (423)
Q Consensus 373 v~iN~~~~~~---~~~pfgG-~~~SG~g~~--~g~~~l~~~~~~ 410 (423)
|+||+++... +.+|||| +|.||+|++ +|.+++++||++
T Consensus 406 v~iN~~~~~~~~~~~~pfgG~~k~sg~g~~~~~g~~~~~~~~~~ 449 (454)
T cd07129 406 LLFNGWPTGVEVCPAMVHGGPYPATTDPRFTSVGTAAIERFLRP 449 (454)
T ss_pred EEECCCCccccccCCCCCCCCcCCCCCCccccccHHHHHHhccc
Confidence 9999865432 4799999 999999998 799999999996
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. |
| >cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-76 Score=597.39 Aligned_cols=397 Identities=24% Similarity=0.277 Sum_probs=356.1
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhc--Ccc---CCCCCCCcee
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ--GLT---APADGPYHVQ 75 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~--~~~---~~~~~~~~~~ 75 (423)
+|.++|+++|+++++.|++++++|++++++|+|||. +.. .|+..+++.+++++....... ... .+.......+
T Consensus 18 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-~~~-~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (442)
T cd07084 18 LALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGW-MFA-ENICGDQVQLRARAFVIYSYRIPHEPGNHLGQGLKQQSH 95 (442)
T ss_pred CCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcCCch-hhh-hhhcchHHHHHHHHHHHHhccccccccccCCCCccccce
Confidence 578999999999999999999999999999999999 554 499999999999988775431 111 1111134568
Q ss_pred EeeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCC-CCCcEEEEeCCchhHHHHh
Q 014515 76 TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGL-PPGVLNIVSGYGPTAGAAL 154 (423)
Q Consensus 76 ~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~-P~g~v~~v~~~~~~~~~~l 154 (423)
.+++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..+.+++.++|+ |++++++++++++ .+..|
T Consensus 96 ~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~l~~ag~~P~g~~~~v~g~~~-~~~~l 174 (442)
T cd07084 96 GYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLPPEDVTLINGDGK-TMQAL 174 (442)
T ss_pred EEeecceeEEEEcCCccHhHHHHHHHHHHHHcCCeEEEECCCCchHHHHHHHHHHHHhCCCCccceEEeeCCcH-HHHHH
Confidence 899999999999999999999999999999999999999999999999999999999998 9999999999666 88999
Q ss_pred hcccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCC-CHHHHHHHHHHHHHhccCCcccCCCeEEEe
Q 014515 155 ASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDA-DVDKAAELAHYALFFNQGQCCCAGSRTFVH 233 (423)
Q Consensus 155 ~~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~a-d~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~ 233 (423)
+.|++++.|+||||+++++.|++.++. +|+++|+|||||+||++|+ |++.+++.+++++|.|+||.|++++++|||
T Consensus 175 ~~~~~v~~V~fTGs~~~g~~i~~~a~~---~~v~lElgG~~~~iV~~dadd~~~a~~~i~~~~~~~~GQ~C~a~~rl~V~ 251 (442)
T cd07084 175 LLHPNPKMVLFTGSSRVAEKLALDAKQ---ARIYLELAGFNWKVLGPDAQAVDYVAWQCVQDMTACSGQKCTAQSMLFVP 251 (442)
T ss_pred HcCCCCCEEEEECCHHHHHHHHHhccC---CcEEEeccCcCcEEECCChhhHHHHHHHHHHHHhcccCCeecCCcEEEEe
Confidence 999999999999999999999998763 7999999999999999999 699999999999999999999999999999
Q ss_pred Cc-cHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhC-CCEEEeCCcccC------CCCceeec
Q 014515 234 ES-VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG-GAKLETGGERLG------AKGYYIKP 305 (423)
Q Consensus 234 ~~-~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~-ga~~~~gg~~~~------~~g~~~~P 305 (423)
++ ++++|+++|+++++++++| ++++||++++ ++.++++++.++ |+++++||...+ ..|+|++|
T Consensus 252 ~~~i~~~f~~~l~~~~~~~~~g-----~~~~gpl~~~----~~~~~i~~a~~~gga~~~~gg~~~~~~~~~~~~g~~~~P 322 (442)
T cd07084 252 ENWSKTPLVEKLKALLARRKLE-----DLLLGPVQTF----TTLAMIAHMENLLGSVLLFSGKELKNHSIPSIYGACVAS 322 (442)
T ss_pred CCccHHHHHHHHHHHHHhcccC-----ccccChhhhH----HHHHHHHHHHhcCCcEEEeCCcccccCCCCCcCCcccCC
Confidence 99 9999999999999999998 6789998765 455667777777 589999997522 24899999
Q ss_pred EEEecCCCcc---cccccccccCeeEEEecCC--HHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhc-ceeEEEEcCc-
Q 014515 306 TVFTGVKDDM---LIAKDEIFGPVQSILKYKD--LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL-RVGSVWINCF- 378 (423)
Q Consensus 306 tvl~~~~~~~---~~~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l-~~g~v~iN~~- 378 (423)
||+.+++++| ++++||+||||++|++|+| ++|+++++|+++|||++||||+|.+.++++++++ ++|+||||+.
T Consensus 323 tvl~~~~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~~G~v~iN~~~ 402 (442)
T cd07084 323 ALFVPIDEILKTYELVTEEIFGPFAIVVEYKKDQLALVLELLERMHGSLTAAIYSNDPIFLQELIGNLWVAGRTYAILRG 402 (442)
T ss_pred eEEEecCcccccchHHheeccCceEEEEEeCCccHHHHHHHHHhCCCCeeEEEEeCCHHHHHHHHHHHHhcCeEEECCCC
Confidence 9999999987 9999999999999999999 9999999999999999999999999999999999 9999999976
Q ss_pred CC-CCCCCCCCC-CCCCCCCCcc-hHHHHHhhheeeE
Q 014515 379 DV-FDAAIPFGG-YKQSGQGREK-GSYSLSNYLQVKA 412 (423)
Q Consensus 379 ~~-~~~~~pfgG-~~~SG~g~~~-g~~~l~~~~~~k~ 412 (423)
+. ..+..|||| .|.||+|++. |.+++++|++...
T Consensus 403 ~~~~~~~~~~gG~~k~sG~g~~~~g~~~~~~~~~~~~ 439 (442)
T cd07084 403 RTGVAPNQNHGGGPAADPRGAGIGGPEAIKLVWRCHA 439 (442)
T ss_pred CCCccccccCCCCCCCCCCCccccchHHhhheeeeee
Confidence 33 445678877 8899999986 9999999998654
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. |
| >cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-75 Score=581.34 Aligned_cols=371 Identities=22% Similarity=0.235 Sum_probs=323.7
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCc-cC-CCCCCCceeEee
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL-TA-PADGPYHVQTLH 78 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~-~~-~~~~~~~~~~~~ 78 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++. ++.+++++......... .. ....+...++++
T Consensus 23 ~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (429)
T cd07121 23 CTLADREKIIEAIREALLSNAEELAEMAVEETGMGRVEDK-------IAKNHLAAEKTPGTEDLTTTAWSGDNGLTLVEY 95 (429)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH-------HHHHHHHHHhcCcccccccccccCCCcceEEEE
Confidence 5789999999999999999999999999999999986653 33455554322111100 00 011223457888
Q ss_pred ccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHH----HcCCCCCcEEEEeCCchhHHHHh
Q 014515 79 EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH----EAGLPPGVLNIVSGYGPTAGAAL 154 (423)
Q Consensus 79 ~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~----~ag~P~g~v~~v~~~~~~~~~~l 154 (423)
+|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..+.++++ ++|+|+|++|++++++.+.++.|
T Consensus 96 ~PlGVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKpse~tp~t~~~l~~l~~~~~~~aGlP~gvv~~v~g~~~~~~~~L 175 (429)
T cd07121 96 APFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKAIAEAGGPDNLVVTVEEPTIETTNEL 175 (429)
T ss_pred cccceEEEEccCCCchhHHHHHHHHHHHcCCCEEEECCccchhHHHHHHHHHHHHHHHcCCCcceEEEecCCChHHHHHH
Confidence 99999999999999999999999999999999999999999999999998874 78999999999998777789999
Q ss_pred hcccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeC
Q 014515 155 ASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHE 234 (423)
Q Consensus 155 ~~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~ 234 (423)
+.||+||.|+||||+.+|+.|++. .+|+++|+|||+|+||++|||+++|++.+++++|.|+||.|+++++||||+
T Consensus 176 ~~~~~v~~I~fTGs~~~g~~v~~~-----~k~~~lelGGk~p~iV~~dADld~Aa~~i~~~~~~n~GQ~C~a~~rv~V~~ 250 (429)
T cd07121 176 MAHPDINLLVVTGGPAVVKAALSS-----GKKAIGAGAGNPPVVVDETADIEKAARDIVQGASFDNNLPCIAEKEVIAVD 250 (429)
T ss_pred HcCCCccEEEeeCCHHHHHHHHhC-----CCceEeecCCCceEEEecCCCHHHHHHHHHhcccccCCCCCCccceEEEeH
Confidence 999999999999999999999874 489999999999999999999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhC--CCEEEeCCccc---CCCCceee---cE
Q 014515 235 SVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG--GAKLETGGERL---GAKGYYIK---PT 306 (423)
Q Consensus 235 ~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~--ga~~~~gg~~~---~~~g~~~~---Pt 306 (423)
++||+|+++|+++ ..++++.++++++.++++++.+. |++++.||... +..|.+++ ||
T Consensus 251 ~i~d~f~~~L~~~---------------~~~~i~~~~~~~v~~~i~~a~~~~~ga~~~~gg~~~~~~~~~G~~~~~~~pt 315 (429)
T cd07121 251 SVADYLIAAMQRN---------------GAYVLNDEQAEQLLEVVLLTNKGATPNKKWVGKDASKILKAAGIEVPADIRL 315 (429)
T ss_pred HHHHHHHHHHHHC---------------CCEEcCHHHHHHHHHhhcccCCCccccccccCcCHHHHHHHcCCCCCCCCeE
Confidence 9999999999884 12478999999999999999864 78999988531 12477777 59
Q ss_pred EEecCCCcccccccccccCeeEEEecCCHHHHHHHHhcCCCCc--eEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCC
Q 014515 307 VFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGL--AAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAA 384 (423)
Q Consensus 307 vl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl--~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~ 384 (423)
|+.+++++|++++||+||||++|++|+|+||||+++|+++||| +++|||+|.++++++++++++|+||||+... +.
T Consensus 316 il~~v~~~~~i~~eE~FgPVl~v~~~~~~~eAi~~an~~~~GLghsa~I~t~d~~~a~~~a~~l~aG~v~iN~~~~--~~ 393 (429)
T cd07121 316 IIVETDKDHPFVVEEQMMPILPVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVENLTKMARAMQTTIFVKNGPSY--AG 393 (429)
T ss_pred EEEecCCCCCccccccccceEEEEEeCCHHHHHHHHHhhccCCCceEEEecCCHHHHHHHHhhCCceEEEEcCCCc--Cc
Confidence 9999999999999999999999999999999999999999999 9999999999999999999999999997644 67
Q ss_pred CCCCCCCCCCC--CCcch
Q 014515 385 IPFGGYKQSGQ--GREKG 400 (423)
Q Consensus 385 ~pfgG~~~SG~--g~~~g 400 (423)
+||||+|.|++ |..-|
T Consensus 394 ~p~gG~k~s~~~~~~~~~ 411 (429)
T cd07121 394 LGVGGEGYTTFTIAGPTG 411 (429)
T ss_pred cccCCCccceEEecCCcC
Confidence 99999999998 54333
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. |
| >TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-73 Score=576.13 Aligned_cols=396 Identities=20% Similarity=0.260 Sum_probs=340.1
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhh----chHHHHHHHHHHHHHHhhhhcCccC---CCC-CC-
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ----TEVPMTTRLFRYYAGWADKIQGLTA---PAD-GP- 71 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~----~ev~~~~~~l~~~~~~~~~~~~~~~---~~~-~~- 71 (423)
+|..+|.++|+++++.|+++.++|++++++|+|||..++.. .++.+.++.+++++..+.+..+... +.. ..
T Consensus 103 ~~~~~R~~vL~~~a~~l~~~~~elA~~~~~etGk~~~~a~e~gkp~~~~r~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 182 (551)
T TIGR02288 103 AGARARAGVCLEILQRLNARSFEIAHAVMHTTGQAFMMAFQAGGPHAQDRGLEAVAYAYREMSRIPETAVWEKPQGKNDP 182 (551)
T ss_pred CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHHhccChHHHHHHHHHHHHHHHHHHhccCcccccccCCCCCc
Confidence 57899999999999999999999999999999999987742 1677889999999887766654432 111 11
Q ss_pred --CceeEeeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHH----HHHHHHHHcCCCCCcEEEEeC
Q 014515 72 --YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL----YVSKLLHEAGLPPGVLNIVSG 145 (423)
Q Consensus 72 --~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~----~l~~~l~~ag~P~g~v~~v~~ 145 (423)
...+..++|+|||++|+|||||++..++++++||++||+||+|||+.+|+++. .+.+++.++|+|+|+||++++
T Consensus 183 ~~~~~~~~~~P~GVv~vI~PwNfP~~~~~~~l~~ALaaGN~VVlKPs~~tpl~~~~~~~~l~e~l~eAGlP~gvv~lv~g 262 (551)
T TIGR02288 183 LKLKKRFTIVPRGIALVIGCSTFPTWNTYPGLFASLATGNPVLVKPHPGAILPLALTVQVAREVLGEAGFDPNLVTLAAF 262 (551)
T ss_pred ccccceEEEEecCeEEEEcCcccHHHHHHHHHHHHHHcCCeEEEECCcccchhHHHHHHHHHHHHHHcCcChhHEEEecC
Confidence 12234789999999999999999999999999999999999999999998655 677999999999999999998
Q ss_pred C-chhHHHHhhcccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcc
Q 014515 146 Y-GPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCC 224 (423)
Q Consensus 146 ~-~~~~~~~l~~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C 224 (423)
. +.++++.|+.||+|+.|.||||+.+|+.|.+.++. +++++|+|||||+||++|+|++.+++.+++++|.|+||.|
T Consensus 263 ~~g~~~~~~L~~~p~v~~I~FTGSt~~G~~I~~~aa~---~~v~lElGGknp~IV~~dADld~aa~~i~~~~f~~sGQ~C 339 (551)
T TIGR02288 263 DPGHEAAQRLATDPAVRIIDFTGSNAFGQWLEQNARQ---AQVYTEKAGVNTVIIESTDDYKAMLRNLAFSLSLYSGQMC 339 (551)
T ss_pred CCcHHHHHHHHhCCCccEEEEECCHHHHHHHHHhccc---CcEEeecCCcCeEEEcCCCCHHHHHHHHHHHHHhhCCCCC
Confidence 5 67789999999999999999999999999987653 7899999999999999999999999999999999999999
Q ss_pred cCCCeEEEeCc---------cHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcc
Q 014515 225 CAGSRTFVHES---------VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER 295 (423)
Q Consensus 225 ~a~~~v~V~~~---------~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~ 295 (423)
++++|+|||++ ++|+|+++|+++++++ +|+|.++.+++||++++++++++ +++++.| +++.||..
T Consensus 340 ta~~ri~V~~~~i~~~~g~~i~def~~~L~~~~~~l-vGdp~~~~~~~Gplis~~~~~ri----~~a~~~G-~v~~gG~~ 413 (551)
T TIGR02288 340 TTTQAILVPRDGIRTDQGRKSYDEVAADLATAIDGL-LGDPARATAVLGAIQSPDTLARI----AEARALG-EVLLASTK 413 (551)
T ss_pred CCCCEEEEeccccccccchhHHHHHHHHHHHHHHHh-cCCcccccccccCcCCHHHHHHH----HHHHhCC-CEEEcCcc
Confidence 99999999999 7999999999999999 99999999999999999999995 5566778 56666653
Q ss_pred cC---CCC-ceeecEEEecCCCcccccccccccCeeEEEecCCHHHHHHHHhcC--CCC-ceEEEecCCHHHHHHHHHhc
Q 014515 296 LG---AKG-YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS--QYG-LAAGVFTHNLDTANTLMRAL 368 (423)
Q Consensus 296 ~~---~~g-~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~--~~g-l~~~v~s~d~~~~~~~~~~l 368 (423)
.. ..| +|++|||+....++|.+++||+||||++|++|+|.||||+++|++ .|| |++||||+|.++++++.+++
T Consensus 414 ~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~~~~~G~Lta~VfT~d~~~~~~~~~~~ 493 (551)
T TIGR02288 414 IEHPEFPGARVRTPLLLKCDAADEAAYMQERFGPIAFVVAVDDGAHAVELARRSVREKGAMTVGAYTTDPEVVDAVQEAA 493 (551)
T ss_pred CCCCCCCCCEEeccEEEEcCCCCCHHHhCCCcCCEEEEEEECCHHHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHHHH
Confidence 21 134 688999995444599999999999999999999999999999998 556 99999999999999999999
Q ss_pred ----------ceeEEEEcCcCCCCCCCCCCCCCCCCCCC-cchHHHHHhhheee
Q 014515 369 ----------RVGSVWINCFDVFDAAIPFGGYKQSGQGR-EKGSYSLSNYLQVK 411 (423)
Q Consensus 369 ----------~~g~v~iN~~~~~~~~~pfgG~~~SG~g~-~~g~~~l~~~~~~k 411 (423)
++|.|+||.. .||++.+.||... .+..+.--.|...+
T Consensus 494 ~~~~~~l~iN~~G~v~vN~~------~~~~~~~~sg~n~~a~~~~~~~~~~~~r 541 (551)
T TIGR02288 494 WDAAVALSLNLTGGVFVNQS------AAFSDFHGTGGNPAANASLSDGAFVANR 541 (551)
T ss_pred HHhccCeeecCCceEEEccC------CCCCCCCCCCCCCccCCcccchhhhhcc
Confidence 6677777653 5778888888763 44444544555443
|
This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. |
| >PRK15398 aldehyde dehydrogenase EutE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-74 Score=577.19 Aligned_cols=384 Identities=21% Similarity=0.208 Sum_probs=330.3
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhh---hcCccCCCCCCCceeEe
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK---IQGLTAPADGPYHVQTL 77 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~ 77 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++.. ..+++++..... ....... ..+...+++
T Consensus 55 ~~~~~R~~~L~~la~~l~~~~~ela~~~~~E~Gk~~~ea~~-------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~ 126 (465)
T PRK15398 55 KSLAMRQRIIDAIREALLPHAEELAELAVEETGMGRVEDKI-------AKNVAAAEKTPGVEDLTTEALT-GDNGLTLIE 126 (465)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcHHHHH-------HHHHHHHHHhccccccccCccc-CCCceeEEE
Confidence 47899999999999999999999999999999999887643 233444433211 1111111 122345788
Q ss_pred eccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHH----HcCCCCCcEEEEeCCchhHHHH
Q 014515 78 HEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH----EAGLPPGVLNIVSGYGPTAGAA 153 (423)
Q Consensus 78 ~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~----~ag~P~g~v~~v~~~~~~~~~~ 153 (423)
++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.++++ ++|+|+|+++++++.+.+.++.
T Consensus 127 ~~P~GVV~~I~PwN~P~~~~~~~ia~ALaaGN~VVlKps~~tp~t~~~l~~ll~~~l~eaGlP~gvv~vv~g~~~~~~~~ 206 (465)
T PRK15398 127 YAPFGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAIELLNEAIVAAGGPENLVVTVAEPTIETAQR 206 (465)
T ss_pred ecccEEEEEeeCCCCchHHHHHHHHHHHHhCCcEEEECCccchHHHHHHHHHHHHHHHHcCCCCCeEEEecCCCHHHHHH
Confidence 899999999999999999999999999999999999999999999999999876 5899999999999866778899
Q ss_pred hhcccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEe
Q 014515 154 LASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVH 233 (423)
Q Consensus 154 l~~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~ 233 (423)
|++||+||.|+||||+++|+.|++ ..+|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||
T Consensus 207 L~~~~~vd~I~fTGS~~~G~~v~~-----~~k~~~~elGGk~p~IV~~dADld~Aa~~i~~g~~~n~GQ~C~A~~rvlV~ 281 (465)
T PRK15398 207 LMKHPGIALLVVTGGPAVVKAAMK-----SGKKAIGAGAGNPPVVVDETADIEKAARDIVKGASFDNNLPCIAEKEVIVV 281 (465)
T ss_pred HHcCCCccEEEeeCCHHHHHHHHH-----cCCceeeecCCCceEEEecCCCHHHHHHHHHHhcccCCCCcCCCCceEEEe
Confidence 999999999999999999999988 258999999999999999999999999999999999999999999999999
Q ss_pred CccHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcc---cCCCCcee---ecEE
Q 014515 234 ESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER---LGAKGYYI---KPTV 307 (423)
Q Consensus 234 ~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~---~~~~g~~~---~Ptv 307 (423)
++++|+|+++|+++ .+|+++..+++++.++++++.+++++++.||.. .+..|.++ +|||
T Consensus 282 ~si~d~f~~~l~~~---------------~~~li~~~~~~~v~~~l~~~~~~~~~~~~g~~~~~i~~~~G~~~~~~~~tv 346 (465)
T PRK15398 282 DSVADELMRLMEKN---------------GAVLLTAEQAEKLQKVVLKNGGTVNKKWVGKDAAKILEAAGINVPKDTRLL 346 (465)
T ss_pred HHHHHHHHHHHHHc---------------CCccCCHHHHHHHHHHHhhcccccchhhhCCCHHHHHHhCCCCCCCCCCEE
Confidence 99999999999884 237999999999999999654456677777642 12246555 4799
Q ss_pred EecCCCcccccccccccCeeEEEecCCHHHHHHHHhcCCCCc--eEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCC
Q 014515 308 FTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGL--AAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAI 385 (423)
Q Consensus 308 l~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl--~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~ 385 (423)
+.++++++++++||+||||++|++|+|+|||++++|+++||| ++||||+|.++++++++++++|+|+||+.. . +.+
T Consensus 347 l~~v~~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~~yGL~hs~~IfT~d~~~a~~~a~~l~~G~V~iN~~~-~-~~~ 424 (465)
T PRK15398 347 IVETDANHPFVVTELMMPVLPVVRVKDVDEAIALAVKLEHGNRHTAIMHSRNVDNLNKMARAIQTSIFVKNGPS-Y-AGL 424 (465)
T ss_pred EecCCCCCchhcccccCceEEEEEeCCHHHHHHHHHhcccCCcceEEEecCCHHHHHHHHHhCCceEEEECCCC-c-ccc
Confidence 999999999999999999999999999999999999999998 999999999999999999999999999764 2 678
Q ss_pred CCCCCCCCCCCCcchHHHHHhhheeeEEEEe
Q 014515 386 PFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 416 (423)
Q Consensus 386 pfgG~~~SG~g~~~g~~~l~~~~~~k~v~~~ 416 (423)
||||+|.|.+- -+|+.| +..|..|+++.+
T Consensus 425 p~gg~~~s~~~-~~~~~g-~~~~~~~~~~~~ 453 (465)
T PRK15398 425 GLGGEGFTTFT-IATPTG-EGVTSARTFTRR 453 (465)
T ss_pred CcCCCCCceee-ecccCC-CCccchhhhhhh
Confidence 99999998852 237777 777777776554
|
|
| >cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-73 Score=566.06 Aligned_cols=391 Identities=17% Similarity=0.209 Sum_probs=329.0
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHH--HHHHHHHHhhhhcCccCCCCCCCceeEee
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTR--LFRYYAGWADKIQGLTAPADGPYHVQTLH 78 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (423)
+|..+|.++|+++++.|++++++|++++++|+|||+.+++. ++..... ..++++. ...++..+...+...+..+
T Consensus 18 ~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~ea~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 93 (439)
T cd07081 18 KSQEMVDLIFRAAAEAAEDARIDLAKLAVSETGMGRVEDKV-IKNHFAAEYIYNVYKD---EKTCGVLTGDENGGTLIIA 93 (439)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHHH-HHHHHHHHHHHHHHhc---cccCceecCCCCCceEEEE
Confidence 58899999999999999999999999999999999988764 4544433 2222221 2222222322234568899
Q ss_pred ccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHH----HcCCCCCcEEEEeCCchhHHHHh
Q 014515 79 EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH----EAGLPPGVLNIVSGYGPTAGAAL 154 (423)
Q Consensus 79 ~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~----~ag~P~g~v~~v~~~~~~~~~~l 154 (423)
+|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++. ++|+|+|++|++++.+.+.++.|
T Consensus 94 ~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~~l~~aG~P~gvv~~v~g~~~~~g~~L 173 (439)
T cd07081 94 EPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVAAGAPENLIGWIDNPSIELAQRL 173 (439)
T ss_pred ecceEEEEECCCcchHHHHHHHHHHHHhcCCeEEEECCccchHHHHHHHHHHHHHHHHcCCChhhEEEEcCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999988888775 67999999999998777889999
Q ss_pred hcccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeC
Q 014515 155 ASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHE 234 (423)
Q Consensus 155 ~~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~ 234 (423)
+.||+|++|.||||+. +.+.+++ +++|+++|+|||+|+||++|||++.|++.+++++|.++||.|++.+|+|||+
T Consensus 174 ~~~~~V~~V~FTGs~~----v~~~aa~-~~k~~~lElGGk~p~IV~~dADl~~Aa~~iv~~~~~~~GQ~C~a~~rv~V~~ 248 (439)
T cd07081 174 MKFPGIGLLLATGGPA----VVKAAYS-SGKPAIGVGAGNTPVVIDETADIKRAVQSIVKSKTFDNGVICASEQSVIVVD 248 (439)
T ss_pred HcCCCCCEEEEECCHH----HHHHHHh-cCCCEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHhcCCCCCCCCCCEEEEcH
Confidence 9999999999999987 4555665 7899999999999999999999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCc-c-cCCCCceeecE---EEe
Q 014515 235 SVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGE-R-LGAKGYYIKPT---VFT 309 (423)
Q Consensus 235 ~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~-~-~~~~g~~~~Pt---vl~ 309 (423)
++||+|+++|.++ +||+++.+++++++++|+++.++|++++.|+. . ....|.+++|| ++.
T Consensus 249 ~i~d~f~~~l~~~---------------~gpli~~~~~~~v~~~i~~a~~~Ga~~~gg~~~~~~~~~G~~~~pt~~~i~~ 313 (439)
T cd07081 249 SVYDEVMRLFEGQ---------------GAYKLTAEELQQVQPVILKNGDVNRDIVGQDAYKIAAAAGLKVPQETRILIG 313 (439)
T ss_pred HHHHHHHHHHHHc---------------CCccCCHHHHHHHHHHHHhcCCcCCcccCCCHHHHHHHcCCccCCCceEEEE
Confidence 9999999999884 38999999999999999999999998753332 1 11258899998 998
Q ss_pred cCC--CcccccccccccCeeEEEecCCHHHHHHHHhcC----CCCceEEEecCC---HHHHHHHHHhcceeEEEEcCcCC
Q 014515 310 GVK--DDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS----QYGLAAGVFTHN---LDTANTLMRALRVGSVWINCFDV 380 (423)
Q Consensus 310 ~~~--~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~----~~gl~~~v~s~d---~~~~~~~~~~l~~g~v~iN~~~~ 380 (423)
+++ ++|.+++||+||||++|++|+|+||||+++|++ +|||+++|||+| .++++++++++++|.|+||....
T Consensus 314 ~~~~~~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~n~~~~GLsa~V~T~d~~~~~~a~~~a~~l~~G~V~iN~~~~ 393 (439)
T cd07081 314 EVTSLAEHEPFAHEKLSPVLAMYRAANFADADAKALALKLEGGCGHTSAMYSDNIKAIENMNQFANAMKTSRFVKNGPCS 393 (439)
T ss_pred ecCCCCCCchhhhCccCceEEEEEcCCHHHHHHHHHHHhhccCCCceEEEECCCcchHHHHHHHHhhCCceEEEEeCCcc
Confidence 888 999999999999999999999999999999965 799999999999 99999999999999999997542
Q ss_pred CC---CCCCCCCCCCCCC--CCcc-----hHHHHHhhheeeEEEE
Q 014515 381 FD---AAIPFGGYKQSGQ--GREK-----GSYSLSNYLQVKAVVT 415 (423)
Q Consensus 381 ~~---~~~pfgG~~~SG~--g~~~-----g~~~l~~~~~~k~v~~ 415 (423)
.. -..-|||++.+-. |-.+ -..+.++|++.|.+.+
T Consensus 394 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (439)
T cd07081 394 QGGLGDLYNFRGWPSMTLGCGTWGGNSVSENVGPKHLVNLKTVAL 438 (439)
T ss_pred ccccccccCCCCCeeEeeecCCCCCCCcCCCCChHhhheeeeeec
Confidence 21 2345666654322 2211 2235778888887754
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. |
| >KOG2454 consensus Betaine aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-74 Score=531.08 Aligned_cols=413 Identities=31% Similarity=0.536 Sum_probs=382.8
Q ss_pred CHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcC-ccCCC---CCCCceeEe
Q 014515 2 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG-LTAPA---DGPYHVQTL 77 (423)
Q Consensus 2 ~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~-~~~~~---~~~~~~~~~ 77 (423)
|.+.|.++|+.+.+.+-+|.|.+++..++|+||+..++..+|+-.+++.+.|.....++... +..|. ......++.
T Consensus 106 sF~~Rr~fL~~L~~yIi~nQdliaevacrDtGKTmvDAs~GEIlvTlEKI~Wtl~~Ger~L~P~~Rpn~~~~~yKg~~v~ 185 (583)
T KOG2454|consen 106 SFKLRRQFLRILLKYIIENQDLIAEVACRDTGKTMVDASLGEILVTLEKITWTLSEGERWLKPESRPNGRAMLYKGSRVE 185 (583)
T ss_pred cHHHHHHHHHHHHHHHhhchhheeeeeecccCchhhhhhHhHHHHHHHHhhhhhhcchhhcCCcCCCchhheeeccceEE
Confidence 56789999999999999999999999999999999999999999999999998876544332 22221 123567899
Q ss_pred eccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHH----HHHcCCCCCcEEEEeCCchhHHHH
Q 014515 78 HEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKL----LHEAGLPPGVLNIVSGYGPTAGAA 153 (423)
Q Consensus 78 ~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~----l~~ag~P~g~v~~v~~~~~~~~~~ 153 (423)
++|+||+..|.|||||+..++.+++.||.+||++|+|-|+.+.++.....++ |+..|-|++++|++++ =++.++.
T Consensus 186 yePLGVI~aiVsWNYPfHN~lgPiiaAlFsGNaIVvK~SE~~~WS~~fy~e~ir~~L~a~g~~p~LVq~itc-lpd~a~~ 264 (583)
T KOG2454|consen 186 YEPLGVIGAIVSWNYPFHNILGPIIAALFSGNAIVVKVSEHASWSGCFYFEIIRAALAAVGAPPNLVQVITC-LPDTAEA 264 (583)
T ss_pred EeecceEEEeeecCCchhhhhhHHHHHHhcCCeEEEEeecceeeehhhHHHHHHHHHHHcCCCcchhheeec-CcchHhH
Confidence 9999999999999999999999999999999999999999999887765554 5556999999999998 4578999
Q ss_pred hhcccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEe
Q 014515 154 LASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVH 233 (423)
Q Consensus 154 l~~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~ 233 (423)
|++|+.++++.|.||..+++.|++.+++ .++|+++|+|||+++|+++|+|++..+..++++.|..+||.|.+.+|++||
T Consensus 265 ltSh~g~khitFiGSqpvak~i~~~AAk-~LTPv~lELGGKDafIi~dda~l~~v~si~mRGtfQSsGQNCiGiER~iv~ 343 (583)
T KOG2454|consen 265 LTSHSGVKHITFIGSQPVAKMIMRNAAK-TLTPVTLELGGKDAFIICDDADLSHVASIAMRGTFQSSGQNCIGIERFIVH 343 (583)
T ss_pred hhcCCCcceEEEecCcHHHHHHHHhhhh-hcCcEEEeecCcccEEEeccccHHHHHHHHHhhhhhhcCCcccceeEEEEe
Confidence 9999999999999999999999999998 899999999999999999999999999999999999999999999999999
Q ss_pred CccHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC----CCCceeecEEEe
Q 014515 234 ESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFT 309 (423)
Q Consensus 234 ~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~----~~g~~~~Ptvl~ 309 (423)
+++||.|+..|-++++.++.|.|.....+||.|++.++++.+++++++|+++||++..||.+.. ..|.|++||++.
T Consensus 344 k~~Yd~~i~~l~~rv~s~r~G~~~~~~vDMGAm~s~nrfdhLesLv~DAv~KGArl~~gGsrF~Hpkyp~g~YF~PTlLv 423 (583)
T KOG2454|consen 344 KDIYDAFIGQLTKRVKSVRAGPPLTGRVDMGAMCSQNRFDHLESLVNDAVDKGARLAVGGSRFGHPKYPVGQYFPPTLLV 423 (583)
T ss_pred cchHHHHHHHHHHHHHHHHcCCCccCccchhhhhhccchHHHHHHHHHHHhhcchhhhcccccCCCCCCcccccCCeEEE
Confidence 9999999999999999999999999999999999999999999999999999999999998642 468999999999
Q ss_pred cCCCcccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCC-CCCCCC
Q 014515 310 GVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFD-AAIPFG 388 (423)
Q Consensus 310 ~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~-~~~pfg 388 (423)
+++++|.+++||.||||++++.+++.|++++++|+++|||+++||+.|..+.+++++++++|.|.||+...+. -.+|||
T Consensus 424 dvt~eMKIaqeE~FgPI~~im~ak~~eh~i~lAN~s~fgLG~sVFg~dk~~c~y~a~~lqtG~vAiNDFasfY~cQlPFG 503 (583)
T KOG2454|consen 424 DVTHEMKIAQEEAFGPIMPIMQAKTDEHVIKLANDSRFGLGCSVFGGDKHRCKYIASQLQTGVVAINDFASFYMCQLPFG 503 (583)
T ss_pred ecCchhhhHhhhccccchhhhhcCChHHHHhhccCCcccccceeccccHHHHHHHHhhhhccceeehhhhhhheeccccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999986654 569999
Q ss_pred CCCCCCCCCcchHHHHHhhheeeEEEEe
Q 014515 389 GYKQSGQGREKGSYSLSNYLQVKAVVTA 416 (423)
Q Consensus 389 G~~~SG~g~~~g~~~l~~~~~~k~v~~~ 416 (423)
|+|.||+|++.|.+||+...+.|+|.+.
T Consensus 504 G~k~SGyGrFaG~EGLrg~Cn~Ksv~yd 531 (583)
T KOG2454|consen 504 GVKDSGYGRFAGIEGLRGCCNVKSVAYD 531 (583)
T ss_pred CccCCCccccccHHHHHHHhcccceecc
Confidence 9999999999999999999999999665
|
|
| >cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-71 Score=566.56 Aligned_cols=404 Identities=19% Similarity=0.224 Sum_probs=349.8
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhh----chHHHHHHHHHHHHHHhhhhcCccC---CCC----
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ----TEVPMTTRLFRYYAGWADKIQGLTA---PAD---- 69 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~----~ev~~~~~~l~~~~~~~~~~~~~~~---~~~---- 69 (423)
+|.++|.++|+++++.|++++++|++++++|+||+..++.. .|++++++.++|+...+..+.+... +..
T Consensus 103 ~~~~~R~~il~~~a~~l~~~~~ela~a~~~e~Gk~~~~a~qa~~~~evd~a~e~~~~a~~~~~~~~~~~~w~~~~~~~~~ 182 (549)
T cd07127 103 AGARARAGVCLEILQRLNARSFEMAHAVMHTTGQAFMMAFQAGGPHAQDRGLEAVAYAWREMSRIPPTAEWEKPQGKHDP 182 (549)
T ss_pred CCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHCCCHHHHHhcccHHHHHHHHHHHHHHHHHHHhccccccccCCCCCccc
Confidence 57899999999999999999999999999999999987753 1799999999999988766544321 100
Q ss_pred CCCceeEeeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHH----HHHHHHHHcCCCCCcEEEEeC
Q 014515 70 GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL----YVSKLLHEAGLPPGVLNIVSG 145 (423)
Q Consensus 70 ~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~----~l~~~l~~ag~P~g~v~~v~~ 145 (423)
........++|+||+++|+|||||++..+.++++||++||+||+|||+.+|+++. .+.++|.++|+|+|+||++++
T Consensus 183 l~~~k~~~~~P~GVv~vI~p~nfP~~~~~~~i~~ALaaGN~VVvKPs~~a~ls~~~~~~~i~~~l~eAGlP~gvv~~v~g 262 (549)
T cd07127 183 LAMEKTFTVVPRGVALVIGCSTFPTWNGYPGLFASLATGNPVIVKPHPAAILPLAITVQVAREVLAEAGFDPNLVTLAAD 262 (549)
T ss_pred ccccceeEEecccEEEEEeCcCChHHHHHHHHHHHHhcCCeEEEECCcccchhHHHHHHHHHHHHHHcCcCcccEEEEeC
Confidence 0112234789999999999999999999999999999999999999999998764 466899999999999999997
Q ss_pred C-chhHHHHhhcccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcc
Q 014515 146 Y-GPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCC 224 (423)
Q Consensus 146 ~-~~~~~~~l~~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C 224 (423)
. +.++++.|+.||+++.|.||||+.+|+.|.+.++. +|+++|+||||++||++|+|++.+++.+++++|.++||.|
T Consensus 263 ~~~~~~~~~L~~~p~v~~I~FTGS~~~G~~i~~~a~~---~~v~~ElGGkn~~IV~~dADl~~aa~~i~~~~f~~sGQ~C 339 (549)
T cd07127 263 TPEEPIAQTLATRPEVRIIDFTGSNAFGDWLEANARQ---AQVYTEKAGVNTVVVDSTDDLKAMLRNLAFSLSLYSGQMC 339 (549)
T ss_pred CCcHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhcc---CcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHccCCCCC
Confidence 5 46789999999999999999999999999998764 7999999999999999999999999999999999999999
Q ss_pred cCCCeEEEeCc---------cHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcc
Q 014515 225 CAGSRTFVHES---------VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER 295 (423)
Q Consensus 225 ~a~~~v~V~~~---------~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~ 295 (423)
++++++|||++ ++|+|+++|+++++++ +|+|.+..+++||++++++++++.+ +++.|+ +++||..
T Consensus 340 ~a~~ri~V~~s~i~~~~g~~i~d~f~~~L~~~~~~l-~Gdp~~~~~~~Gpli~~~~~~ri~~----a~~~g~-vl~gg~~ 413 (549)
T cd07127 340 TTPQNIYVPRDGIQTDDGRKSFDEVAADLAAAIDGL-LADPARAAALLGAIQSPDTLARIAE----ARQLGE-VLLASEA 413 (549)
T ss_pred CCCCEEEEECCccccccchhHHHHHHHHHHHHHHHh-cCCccccccccCCcCCHHHHHHHHH----HHhCCC-EEEcCCc
Confidence 99999999999 8999999999999999 9999999999999999999999865 445565 7777764
Q ss_pred cC---CCC-ceeecEEEecCCCcccccccccccCeeEEEecCCHHHHHHHHhcCC--C-CceEEEecCCHHHHHHHHHhc
Q 014515 296 LG---AKG-YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQ--Y-GLAAGVFTHNLDTANTLMRAL 368 (423)
Q Consensus 296 ~~---~~g-~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~--~-gl~~~v~s~d~~~~~~~~~~l 368 (423)
.. ..| ++++|||+...++++.+++||+||||++|++|+|.+|+++++|++. + ||+++|||+|.+.++++.+++
T Consensus 414 ~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~~d~~eai~~an~~~~~~ggLt~sVfs~D~~~~~~~~~~~ 493 (549)
T cd07127 414 VAHPEFPDARVRTPLLLKLDASDEAAYAEERFGPIAFVVATDSTDHSIELARESVREHGAMTVGVYSTDPEVVERVQEAA 493 (549)
T ss_pred CCCcCCCCceEEeCEEEEeCCCCCHHHcCCCcCceEEEEEeCCHHHHHHHHHhcccCCCCceEEEEcCCHHHHHHHHHHH
Confidence 32 134 4679999998888999999999999999999999999999999974 4 699999999999999999995
Q ss_pred -cee-EEEEcCcCCCCCC--CCCCCCCCCCCCC-cchHHHHHhhheeeEE
Q 014515 369 -RVG-SVWINCFDVFDAA--IPFGGYKQSGQGR-EKGSYSLSNYLQVKAV 413 (423)
Q Consensus 369 -~~g-~v~iN~~~~~~~~--~pfgG~~~SG~g~-~~g~~~l~~~~~~k~v 413 (423)
++| .++||+....... .||||.+.||... .+..+..-.|...+-.
T Consensus 494 ~~~~~~~~iN~tg~v~~~q~~~Fg~~~~sg~n~~a~~~~~~~~fv~~r~~ 543 (549)
T cd07127 494 LDAGVALSINLTGGVFVNQSAAFSDFHGTGANPAANAALTDGAFVANRFR 543 (549)
T ss_pred HHhcCcEEEcCCceEEEecCcCCCCCCCCCCCcccccccchhhhhhcceE
Confidence 444 9999965443334 4599999999884 6666777777765533
|
Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes. |
| >cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-73 Score=563.50 Aligned_cols=365 Identities=21% Similarity=0.260 Sum_probs=318.4
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChh----hhhh-------chHHHHHHHHHHHHHHhhhhcCccCCC-
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE----QSAQ-------TEVPMTTRLFRYYAGWADKIQGLTAPA- 68 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~----~~~~-------~ev~~~~~~l~~~~~~~~~~~~~~~~~- 68 (423)
+|.++|.++|+++++.|++++++|++++++|+||+.. ++.. .|+..+++.+++++...+. .+...+.
T Consensus 17 ~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~gk~~e~G~~~a~~~~l~~~~~ev~~~~~~~~~~a~~~~~-~g~~~~~~ 95 (406)
T cd07079 17 LSTEQKNAALLAIADALEANRDEILEANAKDLAAAREAGLSEALLDRLLLTPERIEAMAEGLRQVAALPDP-VGEVLRGW 95 (406)
T ss_pred CCHHHHHHHHHHHHHHHHhchHHHHHHhhhhHHHHHHcCCCHHHHhHhcCCHHHHHHHHHHHHHHHhcCCC-Ccccccce
Confidence 5789999999999999999999999999777666643 2221 3888899999988865432 2222221
Q ss_pred --CCCCceeEeeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHH----HcCCCCCcEEE
Q 014515 69 --DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH----EAGLPPGVLNI 142 (423)
Q Consensus 69 --~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~----~ag~P~g~v~~ 142 (423)
..+...+.+++|+|||++|+|| +| ...++++++||++||+||+|||+.+|.++..+.+++. ++|+|+|++|+
T Consensus 96 ~~~~~~~~~~~~~PlGVV~~I~p~-~p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~~l~~aG~P~gvv~~ 173 (406)
T cd07079 96 TLPNGLQIEKVRVPLGVIGIIYES-RP-NVTVDAAALCLKSGNAVILRGGSEALHSNRALVEIIQEALEEAGLPEDAVQL 173 (406)
T ss_pred eccCccceeEEecceEEEEEecCC-Cc-chHHHHHHHHHHhCCEEEEeCCchhhhHHHHHHHHHHHHHHHcCCCcccEEE
Confidence 2233567899999999999995 45 6788999999999999999999999999999999887 78999999999
Q ss_pred EeCCch-hHHHHhhcccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccC
Q 014515 143 VSGYGP-TAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQG 221 (423)
Q Consensus 143 v~~~~~-~~~~~l~~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~G 221 (423)
+++.+. +.++.|..||++|.|+||||+++|+.|++.+ ++|+++|+|||||+||++|||++.|++.+++++|.|+|
T Consensus 174 v~g~~~~~~~~~l~~~~~v~~i~fTGS~~~G~~i~~~a----~~pv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~G 249 (406)
T cd07079 174 IPDTDREAVQELLKLDDYIDLIIPRGGAGLIRFVVENA----TIPVIKHGDGNCHVYVDESADLEMAVRIVVNAKTQRPS 249 (406)
T ss_pred ecCCChHHHHHHHcCCCCccEEEeCCCHHHHHHHHHhc----CCCEEeecCCcceEEEeCCCCHHHHHHHHHHcccCCCc
Confidence 998543 6788899999999999999999999998765 58999999999999999999999999999999999999
Q ss_pred CcccCCCeEEEeCccHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCc
Q 014515 222 QCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY 301 (423)
Q Consensus 222 q~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~ 301 (423)
.|++++|||||+++||+|+++|++++++ .|++++ +|... ..
T Consensus 250 -~C~a~~rv~V~~si~d~f~~~l~~~~~~----------------------------------~ga~~~-~g~~~---~~ 290 (406)
T cd07079 250 -VCNALETLLVHRDIAEEFLPKLAEALRE----------------------------------AGVELR-GDEET---LA 290 (406)
T ss_pred -ccccceeEEEeHHHHHHHHHHHHHHHHH----------------------------------CCCEEe-cCHHH---HH
Confidence 9999999999999999999999987764 256654 33221 13
Q ss_pred eeecEEEecCCCcccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC
Q 014515 302 YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF 381 (423)
Q Consensus 302 ~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~ 381 (423)
|++|| ++++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||+.+..
T Consensus 291 ~~~pt----v~~d~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GLsa~ift~d~~~a~~~~~~~~~G~v~iN~~~~~ 366 (406)
T cd07079 291 ILPGA----KPATEEDWGTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTENYETAERFLREVDSAAVYVNASTRF 366 (406)
T ss_pred hcccc----cCCCcchhhhhhhCceeEEEEeCCHHHHHHHHHHhCCccccEeeeCCHHHHHHHHHhCCeeEEEEeCCCcc
Confidence 77888 67899999999999999999999999999999999999999999999999999999999999999987766
Q ss_pred CCCCCCCCCCCCCC----CCcchHHHHHhhheeeEEEE
Q 014515 382 DAAIPFGGYKQSGQ----GREKGSYSLSNYLQVKAVVT 415 (423)
Q Consensus 382 ~~~~pfgG~~~SG~----g~~~g~~~l~~~~~~k~v~~ 415 (423)
.+..||||.|+||+ |+++|.+++++|++.|+++.
T Consensus 367 ~~~~pfg~~~~sG~~~~~g~~~g~~~l~~~~~~k~i~~ 404 (406)
T cd07079 367 TDGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVR 404 (406)
T ss_pred cCCCccccceeeeeecCCCcCCCCcChHHhcEEEEEEe
Confidence 66789999999998 89999999999999999865
|
Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1). |
| >PRK00197 proA gamma-glutamyl phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-72 Score=558.08 Aligned_cols=366 Identities=22% Similarity=0.272 Sum_probs=318.6
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChh----hhhh-------chHHHHHHHHHHHHHHhhhhcCccCCC-
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE----QSAQ-------TEVPMTTRLFRYYAGWADKIQGLTAPA- 68 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~----~~~~-------~ev~~~~~~l~~~~~~~~~~~~~~~~~- 68 (423)
+|.++|.++|+++++.|++|+++|++++++|+||+.. ++.. .|+..+++.+++++.+.+.. +...+.
T Consensus 23 ~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~g~~~~~g~~~~~~~~~~~~~~ev~~~~~~~~~~a~~~~~~-g~~~~~~ 101 (417)
T PRK00197 23 LSTAQKNRALLAIADALEANAAEILAANAKDLAAARANGLSAAMLDRLLLTEARIEGIAEGLRQVAALPDPV-GEVLDGW 101 (417)
T ss_pred CCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHHHHhcCCHHHHHHHHHHHHHHhhcCCCc-cccccce
Confidence 5789999999999999999999999999988877642 3321 37888889999988776542 333221
Q ss_pred --CCCCceeEeeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHH----HHcCCCCCcEEE
Q 014515 69 --DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLL----HEAGLPPGVLNI 142 (423)
Q Consensus 69 --~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l----~~ag~P~g~v~~ 142 (423)
..+...+.+++|+|||++|+||| | ..+++++++||++||+||+|||+.+|.++.++.+++ .++|+|+|++|+
T Consensus 102 ~~~~~~~~~~~~~PlGVv~~I~p~p-~-~~~~~~~~~ALaaGN~vVlKPs~~tp~t~~~l~~l~~~~l~~aGlP~gv~~~ 179 (417)
T PRK00197 102 TLPNGLRIGRVRVPLGVIGVIYESR-P-NVTVDAAALCLKSGNAVILRGGSEAIHSNRALVAVIQEALEEAGLPADAVQL 179 (417)
T ss_pred ecCCCceEEEEecCceEEEEEcCCC-c-hHHHHHHHHHHHhCCeEEEecChhhhHHHHHHHHHHHHHHHHcCcChhhEEE
Confidence 22335788999999999999885 4 678889999999999999999999999999998875 688999999999
Q ss_pred EeCCc-hhHHHHhhcccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccC
Q 014515 143 VSGYG-PTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQG 221 (423)
Q Consensus 143 v~~~~-~~~~~~l~~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~G 221 (423)
+++.+ .+.+..|..||++|.|+||||+.+|+.|++.+ ++|+++|+|||||+||++|||++.|++.+++++|.|+|
T Consensus 180 v~g~~~~~~~~~l~~~~~v~~V~fTGS~~~g~~i~~~a----~~~~~lELGGk~p~IV~~dAdl~~Aa~~iv~~~~~n~G 255 (417)
T PRK00197 180 VETTDRAAVGELLKLDGYVDVIIPRGGAGLIRRVVENA----TVPVIEHGDGICHIYVDESADLDKALKIVLNAKTQRPS 255 (417)
T ss_pred ecCCChHHHHHHhccCCCccEEEecCCHHHHHHHHHhc----CCCEEeecCCcceEEEeCCCCHHHHHHHHHHhccCCCc
Confidence 99644 45788898899999999999999999998853 58999999999999999999999999999999999999
Q ss_pred CcccCCCeEEEeCccHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCc
Q 014515 222 QCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY 301 (423)
Q Consensus 222 q~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~ 301 (423)
.|++++|+|||+++||+|+++|++++++++++ +. |+... .+
T Consensus 256 -~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~----------------------------------~~-~~~~~--~~- 296 (417)
T PRK00197 256 -VCNALETLLVHEAIAEEFLPKLAEALAEAGVE----------------------------------LR-GDEAA--LA- 296 (417)
T ss_pred -ccccceEEEEEHHHhHHHHHHHHHHHHHCCCe----------------------------------Ee-cCHHH--HH-
Confidence 99999999999999999999999999876532 11 11100 12
Q ss_pred eeecEEEecCCCcccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC
Q 014515 302 YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF 381 (423)
Q Consensus 302 ~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~ 381 (423)
|+ |||+ ++++.+++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||+....
T Consensus 297 ~~-PTi~---~~~~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~V~t~d~~~~~~~~~~l~~G~v~VN~~~~~ 372 (417)
T PRK00197 297 LL-PDVV---PATEEDWDTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTEDYAAAERFLNEVDSAAVYVNASTRF 372 (417)
T ss_pred hh-cccc---cCCcchhhhhhhCceEEEEEeCCHHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHhCCeeEEEEeCCCcc
Confidence 22 9998 4679999999999999999999999999999999999999999999999999999999999999987766
Q ss_pred CCCCCCCCCCCCCCC----CcchHHHHHhhheeeEEEEe
Q 014515 382 DAAIPFGGYKQSGQG----REKGSYSLSNYLQVKAVVTA 416 (423)
Q Consensus 382 ~~~~pfgG~~~SG~g----~~~g~~~l~~~~~~k~v~~~ 416 (423)
.+..||||.|.||+| +++|.+|+++|++.|++++.
T Consensus 373 ~~~~p~G~~~~sG~g~~~~~~~g~~~l~~~~~~k~v~~~ 411 (417)
T PRK00197 373 TDGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVLG 411 (417)
T ss_pred CCCCccccchhheeecCCCcCCCccchHhhcEEEEEEEC
Confidence 677899999999999 99999999999999998874
|
|
| >TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating) | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-70 Score=554.32 Aligned_cols=393 Identities=18% Similarity=0.178 Sum_probs=337.5
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
+|.++|.++|+++++.|++++++|++++++|+|||..+++..+.......+.+++...+. .+. ...+.+...+.+++|
T Consensus 27 ~s~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~~~~~~~~~~~~~~~~~~~~~-~G~-~~~~~~~~~~~~~~P 104 (488)
T TIGR02518 27 MTQEQIDKIVKAIVDAAYENAVKLAKMANEETGFGKWEDKVIKNVFAATIVYDSIKDMKT-IGI-LSEDKEKKVIEIAVP 104 (488)
T ss_pred CCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHhhCcc-cce-ecCCCCcceEEEEec
Confidence 578999999999999999999999999999999998776532233344445444432222 121 222334557889999
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHH----HHHHHHcCCCCCcEEEEeCCchhHHHHhhc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV----SKLLHEAGLPPGVLNIVSGYGPTAGAALAS 156 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l----~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~ 156 (423)
+|||++|.|||||+.+..+++++||++||+||+|||+.+|.++..+ .+++.++|+|+|+||++++.+.+.+..|+.
T Consensus 105 lGVV~~I~P~n~P~~~~~~k~~~AL~aGNaVIlKps~~a~~s~~~~~~~l~~~l~eaGlP~gvv~~v~g~~~e~~~~L~~ 184 (488)
T TIGR02518 105 VGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRKAAEEAGAPEGAIGCITVPTIEGTNELMK 184 (488)
T ss_pred ceEEEEEcccCChHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHHHHHHHHHHHcCcCcccEEEEcCCCHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999984 455678999999999999877889999999
Q ss_pred ccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCcc
Q 014515 157 HMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 236 (423)
Q Consensus 157 ~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~ 236 (423)
||+||.|.||||+..++. ++. +++|+++|+|||+|+||++|||++.|++.+++++|+|+||.|++.+++|||+++
T Consensus 185 ~~~vd~V~fTGs~~v~~~----a~~-~~~pv~~e~gGn~p~iV~~dADld~Aa~~iv~sk~~~~Gq~C~a~~rllV~~~i 259 (488)
T TIGR02518 185 NKDTSLILATGGEAMVKA----AYS-SGTPAIGVGPGNGPAYIERTANVKKAVRDIIDSKTFDNGTICASEQSIIVEECN 259 (488)
T ss_pred CCCcCEEEEeCCHHHHHH----HHH-cCCCEEEEcCCCCeEEEeCCCCHHHHHHHHHHHHhcCCCCCCCCCCEEEEeHHH
Confidence 999999999999996543 333 679999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH-------HhhcccCCC-CCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEE
Q 014515 237 YDQFVEKANAL-------AMKRVVGDP-FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVF 308 (423)
Q Consensus 237 ~~~f~~~l~~~-------~~~~~~g~p-~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl 308 (423)
||+|+++|+++ .+.+++|+| .++++++||+++..+++++.++++.++.+|+++++||..
T Consensus 260 ~d~f~~~L~~~g~~~~~~~~~~~vg~~~~~~~~~~gp~i~~~~~~~i~~~i~~av~~gakll~gg~~------------- 326 (488)
T TIGR02518 260 KDAVVEELKKQGGYFLTAEEAEKLGKFILRPNGTMNPQIVGKSPQVIANLAGLTVPEDAKVLIGEQN------------- 326 (488)
T ss_pred HHHHHHHHHHhhhhhcCHHHHHhhcccccCCCCCcCcccccchHHHHHHHhccccCCCCEEEEeCCC-------------
Confidence 99999999998 899999996 678999999999999999999999999999999999852
Q ss_pred ecCCCcccccccccccCeeEEEecCCHHHHHHHHhc----CCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC----
Q 014515 309 TGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNA----SQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV---- 380 (423)
Q Consensus 309 ~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~----~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~---- 380 (423)
.+.+++++ .+|+||||++|++|+|+||||+++|+ .+|||+++|||+|.+++++|++++++|+|+||++..
T Consensus 327 -~v~~~~~~-~~E~fgPVl~v~~~~~~dEAI~~an~~i~~~~~Glta~I~T~d~~~a~~f~~~i~ag~V~VN~~~~~~~~ 404 (488)
T TIGR02518 327 -GVGNKNPY-SREKLTTILAFYTEENWHEACELSIELLQNEGAGHTLIIHSENKDIVREFALKKPVSRMLVNTGGSLGGI 404 (488)
T ss_pred -CCCCCCcc-ccCccCceEEEEEeCCHHHHHHHHHHhhhcCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEEcCCCccccc
Confidence 24566775 79999999999999999999999887 689999999999999999999999999999996432
Q ss_pred -----CCCCCC--CCCCCCCCCCCcchHHHHHhhheeeEEEEecC
Q 014515 381 -----FDAAIP--FGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 418 (423)
Q Consensus 381 -----~~~~~p--fgG~~~SG~g~~~g~~~l~~~~~~k~v~~~~~ 418 (423)
+.+.+- ||+++.++++ .+.|++++++.|+|....+
T Consensus 405 Ga~t~~~~~~~~G~G~~~g~st~---~~v~~~~l~~~k~v~~~~~ 446 (488)
T TIGR02518 405 GATTNLVPAFTLGCGAVGGSSTS---DNITPENLINIRRVAYGVR 446 (488)
T ss_pred ccccCCCccccccccccCCCcCC---CCCCHHHhheeeEEEeccc
Confidence 223222 5555555555 3889999999999988763
|
|
| >PLN02418 delta-1-pyrroline-5-carboxylate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-70 Score=577.37 Aligned_cols=362 Identities=20% Similarity=0.252 Sum_probs=321.7
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHH------HHHcC--CChhhhh---hchHHHHHHHHHHHHHHhhhhcCccCC--
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALE------TWDNG--KPFEQSA---QTEVPMTTRLFRYYAGWADKIQGLTAP-- 67 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~------~~e~G--k~~~~~~---~~ev~~~~~~l~~~~~~~~~~~~~~~~-- 67 (423)
+|.++|.++|+++++.|+++.++|++++ ++|+| ||+.++. ..|+..+++.+++++... ...+...+
T Consensus 313 ~~~~eR~~~L~~~a~~l~~~~~ela~~~~~d~~~~~E~G~~k~~~~~~~~~~~ev~~~~~~~~~~a~~~-~~~g~~~~~~ 391 (718)
T PLN02418 313 LSSEERKKILLDVADALEANEELIKAENELDVAAAQEAGYEKSLVSRLTLKPGKIASLAASIRQLADME-DPIGRVLKRT 391 (718)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHhCCchhHHHHHhccHHHHHHHHHHHHHHhcCc-cccCcccccc
Confidence 5789999999999999999999999996 77999 8877753 349999999999999873 33333322
Q ss_pred -CCCCCceeEeeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCc----EEE
Q 014515 68 -ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGV----LNI 142 (423)
Q Consensus 68 -~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~----v~~ 142 (423)
...+...+..++|+|||++|+||| |+... +++++||++||+||+|||+.+|.++..|.+++.++ +|+|+ +|+
T Consensus 392 ~~~~~~~~~~~r~PlGVV~~I~Pwn-P~~~~-~kiapALaaGNtVVlKPse~tp~s~~~l~~l~~eA-lP~gv~~~v~nv 468 (718)
T PLN02418 392 EVADGLVLEKTSCPLGVLLIIFESR-PDALV-QIASLAIRSGNGLLLKGGKEAARSNAILHKVITDA-IPKTVGGKLIGL 468 (718)
T ss_pred ccCCCceEEEEEEeeeEEEEEeCCC-cHHHH-HHHHHHHHhCCEEEEeCCccchHHHHHHHHHHHHH-ccccCCcceEEE
Confidence 122334678999999999999999 99998 89999999999999999999999999999999999 99996 999
Q ss_pred EeCCchhHHHHhhcccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCC
Q 014515 143 VSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQ 222 (423)
Q Consensus 143 v~~~~~~~~~~l~~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq 222 (423)
+++ +.+.++.|..||+|++|+||||+.. +.+.++. .++|+++|+|||+|+||++|||++.|++.+++++|.| ||
T Consensus 469 v~g-~~~~g~~L~~~~~v~~V~FTGSt~~---i~~~aa~-~~k~v~lELGGk~p~iV~~DADld~A~~~i~~~~~~n-GQ 542 (718)
T PLN02418 469 VTS-RDEIPDLLKLDDVIDLVIPRGSNKL---VSQIKAS-TKIPVLGHADGICHVYVDKSADMDMAKRIVVDAKTDY-PA 542 (718)
T ss_pred eCC-cHHHHHHHhhCCCCCEEEEeCCHHH---HHHHHHh-cCCCEEEeCCCcceEEEeCCCCHHHHHHHHHHHhCCC-CC
Confidence 997 5678999999999999999999964 4444554 6899999999999999999999999999999999999 99
Q ss_pred cccCCCeEEEeCccHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCce
Q 014515 223 CCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYY 302 (423)
Q Consensus 223 ~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~ 302 (423)
.|++.+|+|||+++||+ | .+.++|++++++|+++ +||...+ |
T Consensus 543 ~C~a~~RllVh~~i~d~------------------------G---------~~~~~i~~a~~~Ga~l-~Gg~~~~--g-- 584 (718)
T PLN02418 543 ACNAMETLLVHKDLVQN------------------------G---------GLNDLLVALRSAGVTL-YGGPRAS--K-- 584 (718)
T ss_pred ccccCcEEEEecccccc------------------------c---------cHHHHHHHHHHCCCEE-ECCcccc--C--
Confidence 99999999999999986 1 3578999999999999 6886432 3
Q ss_pred eecEEEecCCCcccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCC
Q 014515 303 IKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFD 382 (423)
Q Consensus 303 ~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~ 382 (423)
++. + ++|++++||+|||+++|.+|+|+||||+++|+++|||+++|||+|.+++.++++++++|.||||+++...
T Consensus 585 ----~l~-~-~~~~i~~eE~FgPv~~i~~~~~~dEAI~~aN~s~yGLsa~V~T~d~~~a~~~a~~l~aG~V~IN~~~~~~ 658 (718)
T PLN02418 585 ----LLN-I-PEAQSFHHEYSSLACTVEIVDDVHAAIDHIHRHGSAHTDCIVTEDSEVAEIFLRQVDSAAVFHNASTRFS 658 (718)
T ss_pred ----eeC-C-CCchhhhCCcCCeeEEEEEECCHHHHHHHHhcCCCCCeeEEEcCCHHHHHHHHHhCCeeEEEEeCCCCCC
Confidence 233 3 7899999999999999999999999999999999999999999999999999999999999999987666
Q ss_pred CCCCCCCCCCCCC--CCcc--hHHHHHhhheeeEEEEe
Q 014515 383 AAIPFGGYKQSGQ--GREK--GSYSLSNYLQVKAVVTA 416 (423)
Q Consensus 383 ~~~pfgG~~~SG~--g~~~--g~~~l~~~~~~k~v~~~ 416 (423)
+..||||+|+||+ |+++ |++|+++|++.|+|++.
T Consensus 659 ~~~PfGG~k~SG~stGr~~~~G~~gl~~~t~~K~v~~g 696 (718)
T PLN02418 659 DGARFGLGAEVGISTGRIHARGPVGVEGLLTTRWILRG 696 (718)
T ss_pred CCCCCCCcccccccCCcCCCCCHHHHHHHhcEEEEEEC
Confidence 7789999999999 9875 99999999999998765
|
|
| >cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-70 Score=549.54 Aligned_cols=392 Identities=19% Similarity=0.261 Sum_probs=330.8
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHH-HHHHHHHHhhhhcCccCCCCCCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTR-LFRYYAGWADKIQGLTAPADGPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|++++++|++++++|+|||+.++...|+..+++ .+++++.. ...+.. ....+...+++++
T Consensus 18 ~~~~eR~~~L~~~a~~l~~~~eela~~~~~E~Gk~~~ea~~~e~~~~~~~~~~~~~~~--~~~g~~-~~~~~~~~~~~~~ 94 (436)
T cd07122 18 FSQEQVDKIVEAVAWAAADAAEELAKMAVEETGMGVVEDKVIKNHFASEYVYNDIKDM--KTVGVI-EEDEEKGIVEIAE 94 (436)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHhcC--cceeee-ccCCCCCeEEEee
Confidence 5789999999999999999999999999999999998887557777777 77777752 222211 1122345678899
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHH----HcCCCCCcEEEEeCCchhHHHHhh
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH----EAGLPPGVLNIVSGYGPTAGAALA 155 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~----~ag~P~g~v~~v~~~~~~~~~~l~ 155 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++. ++|+|+|++|++++.+.+.++.|+
T Consensus 95 P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~~l~eaG~P~g~v~~v~g~~~~~~~~l~ 174 (436)
T cd07122 95 PVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAGAPEGLIQWIEEPSIELTQELM 174 (436)
T ss_pred cccEEEEEeCCCCchHHHHHHHHHHHHcCCcEEEECCcchhhHHHHHHHHHHHHHHHcCCCchhEEEecCCChHHHHHHH
Confidence 9999999999999999999999999999999999999999999999888765 789999999999987777899999
Q ss_pred cccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCc
Q 014515 156 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES 235 (423)
Q Consensus 156 ~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~ 235 (423)
+||+|+.|+||||+++++ .+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++
T Consensus 175 ~~~~v~~v~ftGs~~v~~----~a~~-~~~~~~~elgG~~p~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~rv~V~~~ 249 (436)
T cd07122 175 KHPDVDLILATGGPGMVK----AAYS-SGKPAIGVGPGNVPAYIDETADIKRAVKDIILSKTFDNGTICASEQSVIVDDE 249 (436)
T ss_pred cCCCcCEEEEcCCHHHHH----HHHh-cCCCEEEecCCCCeEEEcCCCCHHHHHHHHHHHhhccCCCCCCCCCEEEEech
Confidence 999999999999998654 3444 68999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHhhc-------ccCCC-CCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEE
Q 014515 236 VYDQFVEKANALAMKR-------VVGDP-FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTV 307 (423)
Q Consensus 236 ~~~~f~~~l~~~~~~~-------~~g~p-~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptv 307 (423)
++|+|+++|+++...+ ++|++ .+.++.+||+++..+++++.+++..+...|++++.++
T Consensus 250 i~d~f~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~ga~vl~~~-------------- 315 (436)
T cd07122 250 IYDEVRAELKRRGAYFLNEEEKEKLEKALFDDGGTLNPDIVGKSAQKIAELAGIEVPEDTKVLVAE-------------- 315 (436)
T ss_pred hHHHHHHHHHHhcceecCHHHHHHHHHHhhcCCCCcCccccCcCHHHHHHHcCCCCCCCCeEEEEe--------------
Confidence 9999999999998877 88888 4677889999999888888887776666677766544
Q ss_pred EecCCCcccccccccccCeeEEEecCCHHHHHHHHhcC----CCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCC-
Q 014515 308 FTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS----QYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFD- 382 (423)
Q Consensus 308 l~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~----~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~- 382 (423)
+.+++++|+++ +|.||||++|++|+|+|||++++|++ +|||++||||+|.++++++++++++|.||||+.+.+.
T Consensus 316 ~~~v~~~~~~~-~E~FGPVl~v~~~~~~~eAi~~aN~~~~~~~~GLsa~V~T~d~~~a~~~~~~l~aG~V~IN~~~~~~~ 394 (436)
T cd07122 316 ETGVGPEEPLS-REKLSPVLAFYRAEDFEEALEKARELLEYGGAGHTAVIHSNDEEVIEEFALRMPVSRILVNTPSSLGG 394 (436)
T ss_pred cCCCCCCCcch-hcccCCeEEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHhhCCceEEEEeCCccccc
Confidence 34677888877 56799999999999999999999997 7999999999999999999999999999999865421
Q ss_pred CCCCCC--------CCCCCCCCCcchHHHHHhhheeeEEEE
Q 014515 383 AAIPFG--------GYKQSGQGREKGSYSLSNYLQVKAVVT 415 (423)
Q Consensus 383 ~~~pfg--------G~~~SG~g~~~g~~~l~~~~~~k~v~~ 415 (423)
-+.-+. |.|..|.+...+..+.++|++.++|.+
T Consensus 395 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (436)
T cd07122 395 IGDTYNGLAPSLTLGCGSWGGNSTSDNVGPKHLLNIKRVAY 435 (436)
T ss_pred cCccCCCCCceeeeeccccCCCcCCCCCChHHhheeEeecc
Confidence 111111 122223334445567888888887754
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. |
| >PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-70 Score=589.19 Aligned_cols=399 Identities=18% Similarity=0.271 Sum_probs=343.7
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
+|.++|.++|+++++.|++++++|++++++|+|||..+++..+...+.+.++++.. .++..+. ...+.....+.+++|
T Consensus 31 ~~~~~R~~il~~~a~~l~~~~~~la~~~~~EtGk~~~e~~~~~~~~~~~~~~~~~~-~~~~~g~-~~~~~~~~~~~~~~P 108 (862)
T PRK13805 31 FTQEQVDKIVRAAALAALDARIPLAKMAVEETGRGVVEDKVIKNHFASEYIYNSYK-DEKTVGV-IEEDDEFGIIEIAEP 108 (862)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHHhc-CCCcccc-cCcCCCCCeEEEeec
Confidence 57899999999999999999999999999999999988764333333333333322 1111111 122224456888999
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHH----HcCCCCCcEEEEeCCchhHHHHhhc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH----EAGLPPGVLNIVSGYGPTAGAALAS 156 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~----~ag~P~g~v~~v~~~~~~~~~~l~~ 156 (423)
+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+.+++. ++|+|+|+||++++.+.+.+..|+.
T Consensus 109 ~GVv~~I~pwn~P~~~~~~~~~~ALaaGN~vVlKps~~a~~t~~~~~~l~~~~l~~aG~p~g~v~vv~g~~~~~~~~L~~ 188 (862)
T PRK13805 109 VGVIAGITPTTNPTSTAIFKALIALKTRNPIIFSFHPRAQKSSIAAAKIVLDAAVAAGAPKDIIQWIEEPSVELTNALMN 188 (862)
T ss_pred ceEEEEEeCCCChhHHHHHHHHHHHHhCCcEEEECCcchHHHHHHHHHHHHHHHHHcCcCcccEEEecCCCHHHHHHHHc
Confidence 999999999999999999999999999999999999999999999888865 6799999999999877788999999
Q ss_pred ccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCcc
Q 014515 157 HMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 236 (423)
Q Consensus 157 ~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~ 236 (423)
|++||.|+||||+.++ +.++. +++|+++|+|||+|+||++|||++.|++.|++++|+|+||.|+++++||||+++
T Consensus 189 ~~~vd~I~fTGs~~v~----~~a~~-~~~pv~~e~gGk~p~iV~~dADl~~Aa~~i~~~k~~n~GQ~C~a~~~v~V~~~i 263 (862)
T PRK13805 189 HPGIALILATGGPGMV----KAAYS-SGKPALGVGAGNVPAYIDKTADIKRAVNDILLSKTFDNGMICASEQAVIVDDEI 263 (862)
T ss_pred CCCccEEEecCCHHHH----HHHHh-cCCCeEEECCCCCeEEEeCCCCHHHHHHHHHHhhhccCCCccCCCceEEEehhh
Confidence 9999999999999865 34444 789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEE-EeCCccc---CCCCceeecEE-----
Q 014515 237 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKL-ETGGERL---GAKGYYIKPTV----- 307 (423)
Q Consensus 237 ~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~-~~gg~~~---~~~g~~~~Ptv----- 307 (423)
+|+|+++|+++ .+|+++.+++++++++++++.+.|++. +.||... ...|.+++||+
T Consensus 264 ~d~f~~~l~~~---------------g~~l~~~~~~~~v~~~i~~a~~~~~~~~~~g~~~~~~~~~~G~~~~p~~~~~i~ 328 (862)
T PRK13805 264 YDEVKEEFASH---------------GAYFLNKKELKKLEKFIFGKENGALNADIVGQSAYKIAEMAGFKVPEDTKILIA 328 (862)
T ss_pred HHHHHHHHHHh---------------CCeeCCHHHHHHHHHHHhhccCCCcCccccCCCHHHHHHHcCCCCCCCCeEEEE
Confidence 99999999884 368999999999999999887655532 4466421 12478889986
Q ss_pred -EecCCCcccccccccccCeeEEEecCCHHHHHHHHhc----CCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcC---
Q 014515 308 -FTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNA----SQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFD--- 379 (423)
Q Consensus 308 -l~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~----~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~--- 379 (423)
+.++++++++++ |+||||++|++|+|+||||+++|+ .++||+++|||+|.++++++++++++|+|+||.+.
T Consensus 329 ~l~~v~~~~~~~~-E~fgPVl~v~~~~~~deAi~~~n~~~~~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~vN~~~~~~ 407 (862)
T PRK13805 329 EVKGVGESEPLSH-EKLSPVLAMYKAKDFEDAVEKAEKLVEFGGLGHTAVIYTNDDELIKEFGLRMKACRILVNTPSSQG 407 (862)
T ss_pred ecCCCCCCCcchh-cccCcEEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHhhCCccEEEEeCCcccc
Confidence 667889999876 799999999999999999999988 47999999999999999999999999999999865
Q ss_pred -------CCCCCCCCCCCCCCCCCCcchHHHHHhhheeeEEEEecCCCCCC
Q 014515 380 -------VFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKNPAWL 423 (423)
Q Consensus 380 -------~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~v~~~~~~~~~~ 423 (423)
.+.+.+|||| |.||+|+++|+.|+++|++.|+|..+...+.||
T Consensus 408 ~~~~~~~~~~~~~~fG~-G~~g~~~~~g~~g~~~~~~~k~v~~~~~~~~~~ 457 (862)
T PRK13805 408 GIGDLYNKLAPSLTLGC-GSWGGNSVSENVGAKHLLNIKTVAKRRENMQWF 457 (862)
T ss_pred ccccccCCcCccccccc-cCCCCCcCCCCCCHHHhheeeeeeeccccceee
Confidence 3578899997 999999999999999999999999888777776
|
|
| >cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-67 Score=519.43 Aligned_cols=352 Identities=53% Similarity=0.852 Sum_probs=330.6
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCcc-CCCCCCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT-APADGPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|.++.++|++++++|+|||..++.. |+..+++.+++++.+.++..+.. .....+...+.+++
T Consensus 13 ~~~~~R~~~l~~l~~~l~~~~~~l~~~~~~e~Gk~~~~~~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (367)
T cd06534 13 LPPAERAAILRKIADLLEERREELAALETLETGKPIEEALG-EVARAIDTFRYAAGLADKLGGPELPSPDPGGEAYVRRE 91 (367)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcccccCCCceeEEEEE
Confidence 57899999999999999999999999999999999988765 99999999999998887665432 22344667889999
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccC
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 159 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~ 159 (423)
|+|||++|.|||+|+...++.+++||++||+||+|||+.+|.++..+.++|.++|+|+++++++++++++..+.|+.|++
T Consensus 92 p~Gvv~~i~p~n~p~~~~~~~~~~aL~~GN~vilk~s~~~~~~~~~l~~~l~~ag~p~~~v~~~~~~~~~~~~~l~~~~~ 171 (367)
T cd06534 92 PLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGGGDEVGAALLSHPR 171 (367)
T ss_pred eeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHhcCCCcCeEEEEEcCchhHHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999977778899999999
Q ss_pred cceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHH
Q 014515 160 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239 (423)
Q Consensus 160 v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~ 239 (423)
+|.|+||||+++++.|.+.+++ +++|+++|++|+|++||++|+|++.|++.+++++|.++||.|+++++||||++++++
T Consensus 172 vd~v~~tGs~~~~~~v~~~~~~-~~~~~~~e~~g~~~~iV~~~ad~~~aa~~i~~~~~~~~gq~C~s~~~v~v~~~~~~~ 250 (367)
T cd06534 172 VDKISFTGSTAVGKAIMKAAAE-NLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICTAASRLLVHESIYDE 250 (367)
T ss_pred cCEEEEECCHHHHHHHHHHHhc-CCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHH
Confidence 9999999999999999999887 689999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCcccccc
Q 014515 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAK 319 (423)
Q Consensus 240 f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~ 319 (423)
|+++|+ ||+.++++++++++
T Consensus 251 f~~~l~------------------------------------------------------------tl~~~~~~~~~~~~ 270 (367)
T cd06534 251 FVEKLV------------------------------------------------------------TVLVDVDPDMPIAQ 270 (367)
T ss_pred HHHhhc------------------------------------------------------------eeeeCCCCCCcccc
Confidence 999987 56777788899999
Q ss_pred cccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC-CCCCCCCCCCCCCCCCc
Q 014515 320 DEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGRE 398 (423)
Q Consensus 320 ~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~pfgG~~~SG~g~~ 398 (423)
+|+|||+++|++|++.+|+++++|++++||++||||+|.+.++++++++++|+|+||+.+.. .+..||||.|+||+|++
T Consensus 271 ~E~fgPv~~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgg~~~sG~g~~ 350 (367)
T cd06534 271 EEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALRVAERLRAGTVYINDSSIGVGPEAPFGGVKNSGIGRE 350 (367)
T ss_pred CCccCceEEEEecCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccCccCCC
Confidence 99999999999999999999999999999999999999999999999999999999998776 78899999999999999
Q ss_pred chHHHHHhhheeeEEE
Q 014515 399 KGSYSLSNYLQVKAVV 414 (423)
Q Consensus 399 ~g~~~l~~~~~~k~v~ 414 (423)
+|.+++++|++.|++.
T Consensus 351 ~g~~~~~~~~~~k~i~ 366 (367)
T cd06534 351 GGPYGLEEYTRTKTVV 366 (367)
T ss_pred ChHHHHHHhceEEEEe
Confidence 9999999999999874
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri |
| >cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-68 Score=528.47 Aligned_cols=362 Identities=19% Similarity=0.186 Sum_probs=322.4
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhh----------hchHHHHHHHHHHHHHHhhhhcCccCCCCC
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSA----------QTEVPMTTRLFRYYAGWADKIQGLTAPADG 70 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~----------~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~ 70 (423)
+|.++|.++|+++++.|++++++|++++++|+|||+.+.. ..|+..+++.+++++....+..+...+.
T Consensus 13 ~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~~~~~~~~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~-- 90 (397)
T cd07077 13 NHDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRSLIANWIAMMGCSESKLYKNIDTERGITASVGHIQDVLLPD-- 90 (397)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHhCCcHHHHHHHHHHHHHHHHhcCcccceEecC--
Confidence 5789999999999999999999999999999999965432 1378888888888886544443332221
Q ss_pred CCceeEeeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHc---CCCCCcEEEEeCCc
Q 014515 71 PYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEA---GLPPGVLNIVSGYG 147 (423)
Q Consensus 71 ~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~a---g~P~g~v~~v~~~~ 147 (423)
....+++++|+|||++|+|||+|+. .++++++||++||+||+|||+.+|.++..+.+++.++ |+|+++++++++.+
T Consensus 91 ~~~~~~~~~P~Gvv~~i~p~N~P~~-~~~~~~~aL~aGN~vilKps~~~p~~~~~l~~~~~~~~~~g~p~~~v~~v~~~~ 169 (397)
T cd07077 91 NGETYVRAFPIGVTMHILPSTNPLS-GITSALRGIATRNQCIFRPHPSAPFTNRALALLFQAADAAHGPKILVLYVPHPS 169 (397)
T ss_pred CCceEEEEecceEEEEEeCCCCchH-HHHHHHHHHHcCCcEEEEcCcchhhHHHHHHHHHHHHhhcCCCCceEEEecCCC
Confidence 3457899999999999999999999 9999999999999999999999999999999999887 99999999999877
Q ss_pred hhHHHHhhcccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCC
Q 014515 148 PTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAG 227 (423)
Q Consensus 148 ~~~~~~l~~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~ 227 (423)
.+.+..|+.||++|.|+||||+++++.+.+.+. .+|++.|+||++++||++|+|++.|++.+++++|.| ||.|+++
T Consensus 170 ~~~~~~l~~~~~vd~v~ftGs~~~~~~v~~~~~---~~~~~~~~gg~~~~iv~~dad~~~a~~~~~~~~~~~-GQ~C~a~ 245 (397)
T cd07077 170 DELAEELLSHPKIDLIVATGGRDAVDAAVKHSP---HIPVIGFGAGNSPVVVDETADEERASGSVHDSKFFD-QNACASE 245 (397)
T ss_pred HHHHHHHHcCCCCCEEEecCCHHHHHHHHHcCC---CCceEEecCCcceEEEcCCCCHHHHHHHHHHhhccC-CccCCCC
Confidence 788999999999999999999999999988652 589999999999999999999999999999999999 9999999
Q ss_pred CeEEEeCccHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEE
Q 014515 228 SRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTV 307 (423)
Q Consensus 228 ~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptv 307 (423)
++||||++++|+|+++|++++.. +|+++..||. +.++.||
T Consensus 246 ~~v~V~~~i~d~~~~~l~~~~~~----------------------------------~G~~~~~g~~-----~~~~~pt- 285 (397)
T cd07077 246 QNLYVVDDVLDPLYEEFKLKLVV----------------------------------EGLKVPQETK-----PLSKETT- 285 (397)
T ss_pred eEEEEehhhhHHHHHHHHHHHHh----------------------------------cCcCcCCCce-----eeEEecc-
Confidence 99999999999999999987753 4677776663 3577776
Q ss_pred EecCCCcccccccccccCeeEEEecCCHH----HHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCC-
Q 014515 308 FTGVKDDMLIAKDEIFGPVQSILKYKDLD----EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFD- 382 (423)
Q Consensus 308 l~~~~~~~~~~~~E~fgPvl~v~~~~~~~----eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~- 382 (423)
+++.+.++|+||||+++++|+|++ +|++++|+++|||+++|||+|.++++++++++++|.|+||+.....
T Consensus 286 -----~~~~~~~~E~FgPvl~v~~~~~~~eai~~ai~~~n~~~~gl~~~Ift~d~~~~~~~~~~l~~G~v~vN~~~~~~~ 360 (397)
T cd07077 286 -----PSFDDEALESMTPLECQFRVLDVISAVENAWMIIESGGGPHTRCVYTHKINKVDDFVQYIDTASFYPNESSKKGR 360 (397)
T ss_pred -----CCCChhhhhhhCceeEEEEEcchHHHHHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHhCCEEEEEEeCCccCCC
Confidence 678888999999999999999996 6667889999999999999999999999999999999999876543
Q ss_pred -CCCCCCCCC--CCCCCCcch-HHHHHhhheeeEEE
Q 014515 383 -AAIPFGGYK--QSGQGREKG-SYSLSNYLQVKAVV 414 (423)
Q Consensus 383 -~~~pfgG~~--~SG~g~~~g-~~~l~~~~~~k~v~ 414 (423)
..+||||.+ .||+|+++| .+++++|++.|+++
T Consensus 361 ~~~~~~gg~~~~~SG~g~~~g~~~~~~~~~~~k~v~ 396 (397)
T cd07077 361 GAFAGKGVERIVTSGMNNIFGAGVGHDALRPLKRLV 396 (397)
T ss_pred ccccCCCcceEEEccccCCCCCCCChHHhcceeEee
Confidence 668999999 899999999 99999999999875
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. |
| >COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-67 Score=508.26 Aligned_cols=397 Identities=34% Similarity=0.514 Sum_probs=362.3
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
+|+.+|+.+|+|+++.|+.+..+|..++++|.||++..+.. ||.++++++|||+.+.+.-.++ ...+|
T Consensus 169 tp~~eRAaiL~raAdlme~~m~~L~~L~~REAGKtl~naIA-EVREAVDFlrYYA~~ar~~~g~-----------~~~~~ 236 (769)
T COG4230 169 TPPAERAAILERAADLMEAQMPQLMGLLVREAGKTLSNAIA-EVREAVDFLRYYAGQARDTFGN-----------LTHRP 236 (769)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHH-HHHHHHHHHHHHHHHHhcccCc-----------cccCC
Confidence 57899999999999999999999999999999999999876 9999999999999887653221 34679
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 160 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v 160 (423)
+|.|+||+|||||+..+..+++.||++||+|+-||.+.+|+.+..-+++++++|+|.+++|+++|+++.++..|+.++++
T Consensus 237 ~G~vVcISPWNFPLAIFtGqiaAAL~aGN~VlAKPAEqTpLIAa~aV~ll~eAGvP~~~lqLLpG~G~tvGa~L~~darv 316 (769)
T COG4230 237 LGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQAVRLLHEAGVPPGVLQLLPGRGETVGAALTADARV 316 (769)
T ss_pred CCcEEEECCCCchHHHHHhHHHHHHHcCCccccCccccccHHHHHHHHHHHHcCCChhhHHhcCCCCcccchhhhcCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEeeecCchHHHHHHHHHhhCC--CCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHH
Q 014515 161 DKLAFTGSTTTGKIVLQLAAKSN--LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 238 (423)
Q Consensus 161 ~~v~~tGs~~~~~~v~~~~a~~~--~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~ 238 (423)
++|+||||+++++.|.+..+.+. ..|++.|.||.|.+||+.+|--+.++..++.|+|..+||+|++.+.+++++++.|
T Consensus 317 ~GV~FTGSTevA~li~~~LA~r~g~~~pLIAETGGqNAMIVDSsAL~EQVv~Dvl~SAFdSAGQRCSALRvLclQ~DvAd 396 (769)
T COG4230 317 AGVMFTGSTEVARLIQRQLAKRQGRPIPLIAETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRVLCLQEDVAD 396 (769)
T ss_pred ceEEEeCcHHHHHHHHHHHhhcCCCCCceEeccCCcceEEeechhhHHHHHHHHHHHHhhcccchhhhhhhhhhhhhHHH
Confidence 99999999999999999888754 4689999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC--CCCceeecEEEecCCCccc
Q 014515 239 QFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDML 316 (423)
Q Consensus 239 ~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~--~~g~~~~Ptvl~~~~~~~~ 316 (423)
..++.|+-.+.++++|+|..-.+++||+|+.+....+.++|+..+..|-.+. .-.... ..|.|+.||++.-.+ ..
T Consensus 397 ~~l~mLKGAm~el~~G~p~~l~tDVGPVIdaEAk~~i~~Hi~~mr~~gr~v~-q~~~~~~~q~GtFv~Ptl~El~~--~~ 473 (769)
T COG4230 397 RILTMLKGAMAELRVGNPDRLTTDVGPVIDAEAKANIEKHIQTMRSKGRLVH-QAAAPNSLQKGTFVAPTLIELEN--LD 473 (769)
T ss_pred HHHHHHHHHHHHhccCCccceeccccccccHHHHHHHHHHHHHHHhcccchh-hccCCCccCCceeeCceeEEcCC--HH
Confidence 9999999999999999999999999999999999999999999887764333 222222 479999999997433 33
Q ss_pred ccccccccCeeEEEecC--CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC--CCCCCCCCCCCC
Q 014515 317 IAKDEIFGPVQSILKYK--DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQ 392 (423)
Q Consensus 317 ~~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~pfgG~~~ 392 (423)
-++.|+||||+.|++|+ ++++.|+-+|.++|||+.+|+|+-.+++.++.+++++|.+|||.-.. .-..+||||.|-
T Consensus 474 eL~rEVFGPVLHVvRy~~~~l~~vi~~INatGyGLT~GvHtRideti~~v~~~~~aGNlYVNRN~vGAVVGVQPFGG~GL 553 (769)
T COG4230 474 ELQREVFGPVLHVVRYKRDELDEVIDQINATGYGLTLGVHTRIDETIAHVTERAHAGNLYVNRNIVGAVVGVQPFGGEGL 553 (769)
T ss_pred HHHHHhccceeEEEEecHHHHHHHHHHHhccCcceeeeeecchHHHHHHHHhhccccceEeeccceeeEEeeccCCCCCC
Confidence 46889999999999996 79999999999999999999999999999999999999999997543 235689999999
Q ss_pred CCCC-CcchHHHHHhhheeeE
Q 014515 393 SGQG-REKGSYSLSNYLQVKA 412 (423)
Q Consensus 393 SG~g-~~~g~~~l~~~~~~k~ 412 (423)
||+| ..+|+..|..|...+.
T Consensus 554 SGTGPKAGGp~YL~Rl~~~~p 574 (769)
T COG4230 554 SGTGPKAGGPLYLLRLVSERP 574 (769)
T ss_pred CCCCCCCCChHHHHHHHhcCC
Confidence 9999 5899999999997654
|
|
| >TIGR00407 proA gamma-glutamyl phosphate reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-66 Score=514.72 Aligned_cols=363 Identities=19% Similarity=0.200 Sum_probs=310.2
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHH------HHHHcCCCh------hhhhhchHHHHHHHHHHHHHHhhhhcCccCCC
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAAL------ETWDNGKPF------EQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA 68 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~------~~~e~Gk~~------~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~ 68 (423)
+|.++|.++|+++++.|+++.++|+++ +++|+|||. .++. .|+..+++.+++++..++.. ++..+.
T Consensus 11 ~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~a~~~E~Gk~~~~~~~l~~a~-~ev~~~~~~~~~~a~~a~~~-g~~~~~ 88 (398)
T TIGR00407 11 LSTAEKNDALSKIADGLEAQAPAILAANAKDIAVAKENGLADALLDRLLLTE-GRLKGIADGVKDVIELADPV-GKVIDG 88 (398)
T ss_pred CCHHHHHHHHHHHHHHHHhChHHHHHHhHHHHHHHHHcCCCHHHHHHHcCCH-HHHHHHHHHHHHHhcCCCCC-cccccc
Confidence 578999999999999999999999999 999999993 2333 48999999999999877553 433322
Q ss_pred ---CCCCceeEeeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHH----HHHcCCCCCcEE
Q 014515 69 ---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKL----LHEAGLPPGVLN 141 (423)
Q Consensus 69 ---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~----l~~ag~P~g~v~ 141 (423)
..+...+.+++|+|||++|+||| | ...++++++||++||+||+|||+.+|.++..+.++ +.++|+|+|++|
T Consensus 89 ~~~~~~~~~~~~~~PlGVV~~I~pw~-p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~al~eaGlP~gvv~ 166 (398)
T TIGR00407 89 RELDSGLTLERVRVPLGVLGVIYEAR-P-NVTVDIASLCLKTGNAVILRGGKEAVRSNKALVEVIQDALAQTGLPVGAVQ 166 (398)
T ss_pred eecCCCceEEEEEeCcEEEEEEeCCC-c-hHHHHHHHHHHHhCCeEEECCChhhHHHHHHHHHHHHHHHHHcCCChhHEE
Confidence 23456788999999999999997 6 66888999999999999999999999999999999 559999999999
Q ss_pred EEeCCc-hhHHHHhhcccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhcc
Q 014515 142 IVSGYG-PTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ 220 (423)
Q Consensus 142 ~v~~~~-~~~~~~l~~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~ 220 (423)
++++.+ .+.++.|..||+||+|+||||+.+++.+++. ..+|+++|+|||||+||++|||++.|++.+++++|.+
T Consensus 167 ~v~g~~~~~~~~~l~~~~~v~~v~fTGs~~vg~~~~~~----~~~~~~~e~gGk~p~iV~~dADl~~Aa~~iv~~~~~~- 241 (398)
T TIGR00407 167 LIETPSRELVSELLDLDEYIDLLIPRGGNGLVRLIKQT----STIPVLGHGDGICHIYLDESADLIKAIKVIVNAKTQR- 241 (398)
T ss_pred EecCCCHHHHHHHHhCCCCeeEEEecCCHHHHHHHHHh----CCCCEEEecCCcceEEEeCCCCHHHHHHHHHhhhcCC-
Confidence 999744 4578889999999999999999999988763 4579999999999999999999999999999999964
Q ss_pred CCcccCCCeEEEeCccHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCC
Q 014515 221 GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 300 (423)
Q Consensus 221 Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g 300 (423)
||.|++++|+|||+++||+|+++|++++.++++. ++. .+.+++++.. | |
T Consensus 242 GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~~--------~~~------~~~i~~~v~~----g------~------- 290 (398)
T TIGR00407 242 PSTCNAIETLLVNKAIAREFLPVLENQLLEKGVT--------IHA------DAYALKLLEL----G------P------- 290 (398)
T ss_pred CCcccccceEEEeHHHHHHHHHHHHHHHHhcCCE--------Eec------CHHHHHHHhc----c------C-------
Confidence 9999999999999999999999999999876431 221 1334444321 1 1
Q ss_pred ceeecEEEecCCCcccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC
Q 014515 301 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV 380 (423)
Q Consensus 301 ~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~ 380 (423)
||++ ..++.+++||+||||++|++|+|++|||+++|+++|||++||||+|.++++++++++++|.|+||+++.
T Consensus 291 ----~tv~---~~~~~i~~eE~FgPvl~v~~~~~~~eAi~~aN~~~~GL~a~I~t~d~~~a~~~a~~i~~G~v~iN~~~~ 363 (398)
T TIGR00407 291 ----ATEA---IVCKTDFDKEFLSLDLSVKIVESLEAAIQHINQYGTQHSDAILTENKANAEQFQNGVDSAAVYHNASTR 363 (398)
T ss_pred ----cccc---ccccccccchhhCceeEEEEECCHHHHHHHHHHhCCCCceEEEeCCHHHHHHHHHhCCeeEEEEeCCCC
Confidence 3444 223689999999999999999999999999999999999999999999999999999999999999888
Q ss_pred CCCCCCCCCCCC-----CCCCCcchHHHHHhhheee
Q 014515 381 FDAAIPFGGYKQ-----SGQGREKGSYSLSNYLQVK 411 (423)
Q Consensus 381 ~~~~~pfgG~~~-----SG~g~~~g~~~l~~~~~~k 411 (423)
..+..||| .+- ++..+.+|+.+++.||+.|
T Consensus 364 ~~~~~pfG-~~~~~~~~~~~~~~rg~~~~~~~~~~~ 398 (398)
T TIGR00407 364 FTDGFRFG-FGAEVGISTQKLHARGPMGLEALTSYK 398 (398)
T ss_pred cCCCcccc-cceeeEEecCCCcCCCCcCHHHhcCCC
Confidence 77788997 442 3455688999999999876
|
The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif. |
| >TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-65 Score=542.10 Aligned_cols=361 Identities=19% Similarity=0.226 Sum_probs=306.3
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhc---------------hHHHHHHHHHHHHHHhhhhcCcc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQT---------------EVPMTTRLFRYYAGWADKIQGLT 65 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~---------------ev~~~~~~l~~~~~~~~~~~~~~ 65 (423)
+|.++|.++|+++++.|+++.++|+ .++||++.+++.. |+..++..+++++. ..+..+..
T Consensus 305 ~~~~~R~~~L~~la~~l~~~~eei~----~e~gkdl~~a~~~~~~~~~~~el~~~~~ei~~~~~~l~~~a~-~~~~~g~~ 379 (715)
T TIGR01092 305 LSSEQRKEILHDIADALEDNEDEIL----AENKKDVAAAQGAGYAASLVARLSMSPSKISSLAISLRQLAA-MEDPIGRV 379 (715)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHH----HHHhhhHHHHHhcCcchhHHHHHhCCHHHHHHHHHHHHHHhc-CCCccccc
Confidence 5789999999999999999999997 4777777655431 46677777788776 32322222
Q ss_pred CC---CCCCCceeEeeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCC----
Q 014515 66 AP---ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPG---- 138 (423)
Q Consensus 66 ~~---~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g---- 138 (423)
.+ ...+...+.+++|+|||++|+||| |+.. ++++++||++||+||+|||+.+|.++..+.+++.++ +|+|
T Consensus 380 ~~~~~~~~~~~~~~~~~P~GVV~~I~PwN-P~~~-~~~~~~ALaaGN~vvlKpse~tp~t~~~l~~l~~~a-lp~g~~~~ 456 (715)
T TIGR01092 380 LKRTRIADNLILEKTSVPIGVLLIVFESR-PDAL-VQIASLAIRSGNGLLLKGGKEAARSNAILHKVITEA-IPIHVGKK 456 (715)
T ss_pred ccccccCCCceeEEEEeeceEEEEEeCCC-hHHH-HHHHHHHHHhCCEEEEcCcccchHHHHHHHHHHHHH-cCCCCCCc
Confidence 21 112334578899999999999999 9998 589999999999999999999999999999999999 9987
Q ss_pred cEEEEeCCchhHHHHhhcccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHh
Q 014515 139 VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFF 218 (423)
Q Consensus 139 ~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~ 218 (423)
+++++++ +++.++.|..|+++|+|+||||+.+|+.|++.++ +|+++|+|||+|+||++|||++.|++.++.++|.
T Consensus 457 ~~~~v~~-~~~~~~~l~~~~~vd~I~fTGS~~vG~~i~~~A~----~pv~lElgGk~p~iV~~dADl~~A~~~i~~~~~~ 531 (715)
T TIGR01092 457 LIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKKSTK----IPVLGHADGICHVYVDKSASVDMAKRIVRDAKCD 531 (715)
T ss_pred EEEEeCC-hHHHHHHHhcCCCccEEEEcCCHHHHHHHHHhCC----CCEEEEcCCcceEEECCCCCHHHHHHHHHHHhCC
Confidence 6899985 5677888999999999999999999999998753 8999999999999999999999998766666655
Q ss_pred ccCCcccCCCeEEEeCccHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCC
Q 014515 219 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA 298 (423)
Q Consensus 219 ~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~ 298 (423)
+||.|+++++||||++++|+ | .+.++++.++++|++++ ||...+
T Consensus 532 -~GQ~C~a~~rvlV~~~i~d~-------------------------~--------~~~~~v~~~~~~Ga~l~-Gg~~~~- 575 (715)
T TIGR01092 532 -YPAACNAMETLLVHKDLLRN-------------------------G--------LLDDLIDMLRTEGVTIH-GGPRFA- 575 (715)
T ss_pred -CCCccccCcEEEEehhhccc-------------------------h--------hHHHHHHHHHHCCCEEE-CCcchh-
Confidence 59999999999999999984 0 14567777778899985 775421
Q ss_pred CCceeecEEEecCCCcccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCc
Q 014515 299 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCF 378 (423)
Q Consensus 299 ~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~ 378 (423)
.|+. + .++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||++
T Consensus 576 --~~~~---~--~~~~~~i~~eE~FGPvl~v~~~~~~deAi~~~N~~~~gLa~~ift~d~~~a~~~~~~i~sG~V~vN~~ 648 (715)
T TIGR01092 576 --AYLT---F--NISETKSFRTEYSSLACTVEIVDDVYDAIDHIHKHGSAHTDCIVTEDENVAEFFLQHVDSAAVFHNAS 648 (715)
T ss_pred --heec---c--CCCCchhhhccccCceEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEEeCC
Confidence 2332 1 25689999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCCCCCCCCCCCCCCCC----cchHHHHHhhheeeEEEEec
Q 014515 379 DVFDAAIPFGGYKQSGQGR----EKGSYSLSNYLQVKAVVTAL 417 (423)
Q Consensus 379 ~~~~~~~pfgG~~~SG~g~----~~g~~~l~~~~~~k~v~~~~ 417 (423)
+...+..||||+|+||+|+ ++|++++++|++.|+|.+..
T Consensus 649 ~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~g~ 691 (715)
T TIGR01092 649 TRFSDGFRFGLGAEVGISTSRIHARGPVGVEGLLTTRWLLRGK 691 (715)
T ss_pred CCCCCCCCCcCccccccccCCCCCCChhHHHHhceEEEEEECC
Confidence 6666778999999999995 47999999999999987763
|
This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region. |
| >KOG2455 consensus Delta-1-pyrroline-5-carboxylate dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-66 Score=485.01 Aligned_cols=413 Identities=27% Similarity=0.424 Sum_probs=380.4
Q ss_pred CCHHHHHHHHHHHHHHHH-HcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCC-CCCCceeEee
Q 014515 1 MTAYERSKIILRFADLLE-RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLH 78 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~-~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 78 (423)
+|..+|.+++++.|+++. +++-+|..+.+.-.||...++..+-+.+.++++|+.+..+.++....... ..+..+...+
T Consensus 115 ~PiadR~aI~lkAAdlistkyr~~l~aatMlgqgKt~~qAeiDa~~eLidf~R~na~ya~eL~~~qpi~~~~~t~ns~~y 194 (561)
T KOG2455|consen 115 VPIADRLAIFLKAADLISTKYRYDLLAATMLGQGKTAIQAEIDAAAELIDFFRFNAKYASELYAQQPISQTKGTWNSMEY 194 (561)
T ss_pred CcHHHHHHHHHHHHHHhcchHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHhHHHHHHhhhcCCccccCCCCcceee
Confidence 477899999999999999 89999999999999999999877557888999999998888877665443 4566778888
Q ss_pred ccc-eeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcc
Q 014515 79 EPI-GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH 157 (423)
Q Consensus 79 ~P~-Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~ 157 (423)
+|+ |.|.+|+|+||.........+||| +||+|++|||..+.+++..+.++|++||+|+|++|++|++++..++.+..+
T Consensus 195 RpleGFVaAisPFnftAI~gnLa~aPaL-MGN~VLwkPS~ta~lssYii~~il~EAGlP~GvinFvPad~~~f~dtita~ 273 (561)
T KOG2455|consen 195 RPLEGFVAAISPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAALSSYIIYRILREAGLPPGVINFVPADGPLFGDTITAS 273 (561)
T ss_pred ccccceeEEecccceeeeccccccChhh-hcceeeecccchhHHHHHHHHHHHHHcCCCccceeeccCCCCeecceeccC
Confidence 898 999999999999998888889999 799999999999999999999999999999999999999999999999999
Q ss_pred cCcceEeeecCchHHHHHHHHHhh-----CCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEE
Q 014515 158 MEVDKLAFTGSTTTGKIVLQLAAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFV 232 (423)
Q Consensus 158 ~~v~~v~~tGs~~~~~~v~~~~a~-----~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V 232 (423)
|++.++.||||..+-+.+.+..++ +...+++.|+||||.-+|+++||++.++...++++|.++||.|.+.+|+||
T Consensus 274 ~hfaglnftgS~~~fk~lwk~V~~n~~~Y~~fPrlvgEcgGkNFHfVH~SA~VesvV~~TvrsAfey~GQkcsA~SRmYv 353 (561)
T KOG2455|consen 274 PHFAGLNFTGSVPTFKHLWKKVGENVDNYRTFPRLVGECGGKNFHFVHASADVESVVSSTVRSAFEYQGQKCSACSRMYV 353 (561)
T ss_pred cccceeeeecccHHHHHHHHHHHhhhhhhhcchhhhccCCCcceEEeccccchHHHHHHHHHHHHhhcccccchhhhccc
Confidence 999999999999999999988766 235789999999999999999999999999999999999999999999999
Q ss_pred eCccHHHHHHHHHHHHhhcccCCC-CCCCCcccCCCCHHHHHHHHHHHHHHHhC-CCEEEeCCcccCCCCceeecEEEec
Q 014515 233 HESVYDQFVEKANALAMKRVVGDP-FKGGIQQGPQIDSEQFEKILKYIRSGVDG-GAKLETGGERLGAKGYYIKPTVFTG 310 (423)
Q Consensus 233 ~~~~~~~f~~~l~~~~~~~~~g~p-~~~~~~~gp~~~~~~~~~~~~~i~~a~~~-ga~~~~gg~~~~~~g~~~~Ptvl~~ 310 (423)
+++.++.+.+.|.+.-+++++|+| .|.++++||+++...+.|++++|+.|++. ..++++||+.++..|+|+.|||+..
T Consensus 354 p~s~wp~i~e~l~~~~~q~~igd~~~d~~~f~gavIh~~sF~rl~k~le~ak~~~~leiL~GGk~DdS~G~FV~PTiv~~ 433 (561)
T KOG2455|consen 354 PESLWPQIREELVEEHSQLKIGDPVIDFSTFIGAVIHDKSFARLKKVLEHAKKDPELEILAGGKCDDSTGYFVEPTIVLS 433 (561)
T ss_pred chhhcHHHHHHHHHHHhhcccCCccccccchhhhhccHHHHHHHHHHHHhhccCccceeeecCcccCCCCeeecceEEEc
Confidence 999999999999999999999998 88999999999999999999999999765 4689999999999999999999999
Q ss_pred CCCcccccccccccCeeEEEecC--CHHHHHHHH-hcCCCCceEEEecCCHHHHHHHHHhcc--eeEEEEcCcCCCC--C
Q 014515 311 VKDDMLIAKDEIFGPVQSILKYK--DLDEVIQRS-NASQYGLAAGVFTHNLDTANTLMRALR--VGSVWINCFDVFD--A 383 (423)
Q Consensus 311 ~~~~~~~~~~E~fgPvl~v~~~~--~~~eai~~~-n~~~~gl~~~v~s~d~~~~~~~~~~l~--~g~v~iN~~~~~~--~ 383 (423)
-+|+++++.||+|||||+|+.|+ +++|+++++ |.++|+|+.+||++|.+.+.+..++|+ +|..|||+-++.+ .
T Consensus 434 kdP~~pim~ee~fGPvLsVyvY~Dd~~~E~l~lv~~tt~YaLTGaiFaqd~~vv~~a~~~Lr~aAgNfYiNdKcTGsvvg 513 (561)
T KOG2455|consen 434 KDPKDPIMTEEIFGPVLSVYVYEDDKFDEVLKLVDNTTPYALTGAIFAQDREVVLHALDVLRMAAGNFYINDKCTGSVVG 513 (561)
T ss_pred cCCCcchhhhhccCceeEEEEeccccHHHHHHHHhcCCcceeccccccccHHHHHHHHHHHHhhhcceEEccccccceee
Confidence 99999999999999999999996 588999998 678999999999999999999999996 8999999876543 6
Q ss_pred CCCCCCCCCCCCC-CcchHHHHHhhheeeEEE
Q 014515 384 AIPFGGYKQSGQG-REKGSYSLSNYLQVKAVV 414 (423)
Q Consensus 384 ~~pfgG~~~SG~g-~~~g~~~l~~~~~~k~v~ 414 (423)
..||||.+.||+. ..+|++.+.+|+.+.++-
T Consensus 514 qqpFGGaR~SGTNDKaGgp~~l~RwtSp~~ik 545 (561)
T KOG2455|consen 514 QQPFGGARLSGTNDKAGGPHYLLRWTSPLSIK 545 (561)
T ss_pred ccccCcccccCCCCCCCCceEEEeecCcchhh
Confidence 7899999999988 589999999999987663
|
|
| >KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-65 Score=483.63 Aligned_cols=396 Identities=42% Similarity=0.788 Sum_probs=367.7
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCC----CCCceeE
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD----GPYHVQT 76 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~ 76 (423)
||..+|.+.|.++++.+++|.+||+.+.+++.|.-...+.-.-+..+++.+||+++|.+++.+.+.|.. ......+
T Consensus 480 ~sar~rg~~~y~la~lme~h~eelat~e~ldagavytlalkthvgmsi~~~ryfagwcdkiqg~tipi~~arpn~nl~lt 559 (881)
T KOG2452|consen 480 ISARDRGRLMYRLADLMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGSTIPINQARPNRNLTLT 559 (881)
T ss_pred cchhhhhhhhhhccchhhhccchhhhhhhccccceeeeeehhhcCceehHHHHhhhhhhhccCceeccccCCCCCcceee
Confidence 688999999999999999999999999999999654444445677889999999999999999887743 2346678
Q ss_pred eeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhc
Q 014515 77 LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALAS 156 (423)
Q Consensus 77 ~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~ 156 (423)
.++|+|||.+|.|||||+..+.|+.+.+|++- ..++++- .|++++++|++.-+++.|..
T Consensus 560 ~~epigv~g~i~pwnyplmmlswk~aaclaa~-----------------~~k~~e~----sgvini~~gsgslvg~rls~ 618 (881)
T KOG2452|consen 560 RKEPVGVCGIIIPWNYPLMMLSWKTAACLAAQ-----------------VLKFAEL----TGVVNVLPGSGSLVGQRLSD 618 (881)
T ss_pred ecCcceeEEEeccCCchHHHHHHHHHHHHHHH-----------------Hhhhhhh----cceEEEecCCcchhcccccc
Confidence 99999999999999999999999999888632 1222221 38999999999999999999
Q ss_pred ccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCcc
Q 014515 157 HMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 236 (423)
Q Consensus 157 ~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~ 236 (423)
||+|+.|-||||++.|+.|++.++..+.|++.+|+||++|+|+..|||+++|++....+.|++-|..|++..|+||.+++
T Consensus 619 hpdvrkigftgsteig~~im~sca~snikkvslelgg~sp~iifad~dl~kav~~~~~~vff~kgenciaagr~fi~~si 698 (881)
T KOG2452|consen 619 HPDVRKIGFTGSTEVGKHIMKSCAISNVKKVSLELGGESPFIIFADCDLNKAVQMGMSSVFFSKGENCIAAGRLFVEDSI 698 (881)
T ss_pred CCccceeccccchHHHHHHHHHHhhcchheeeeeccCCCceEEEecCcHHHHHHhhccceeecCCcchhhhcceeehhhh
Confidence 99999999999999999999999987899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCccc
Q 014515 237 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDML 316 (423)
Q Consensus 237 ~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~ 316 (423)
.|+|+.++.+..+++++|+|+|.+++-||.-...|+.++-+|++.+++.||++.+||.+.+..|.|++|||+.+++++|.
T Consensus 699 hd~fv~~~vee~~~~~ig~pldr~t~hgpqnh~ahl~kl~ey~~~~v~~ga~~~~gg~~~~r~g~~f~pti~s~i~d~~f 778 (881)
T KOG2452|consen 699 HDEFVRRVVEEVRKMKVGNPLDRDTDHGPQNHHAHLVKLMEYCQHGVKEGATLVCGGNQVPRPGFFFEPTVFTDVEDHMF 778 (881)
T ss_pred hHHHHHHHHHHHHhhccCCcccccccCCchhHHHHHHHHHHHHHHHhccCcEEEECCccCCCCCcccCCeeecccchhhh
Confidence 99999999999999999999999999999999999999999999999999999999999888999999999999999999
Q ss_pred ccccccccCeeEEEecC--CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCC
Q 014515 317 IAKDEIFGPVQSILKYK--DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSG 394 (423)
Q Consensus 317 ~~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG 394 (423)
+.+||-||||+.|-+|+ |+|+.++.+|.+++||+++|||+|...+.++++.+.+|+|+||++...+...||||+|+||
T Consensus 779 ~a~eesfgpim~is~f~d~d~~~vl~ran~tefgla~gvftrd~~k~l~v~~~l~agtvfvnty~ktdvaapfggfkqsg 858 (881)
T KOG2452|consen 779 IAKEESFGPVMIISRFADGDLDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFVNTYNKTDVAAPFGGFKQSG 858 (881)
T ss_pred hhhccccCceEEEEecCCCCHHHHHhhccccccccccceeecccchhhhhhhhhccceEEEeeccccccccCCCCccccc
Confidence 99999999999999997 6889999999999999999999999999999999999999999998888889999999999
Q ss_pred CCCcchHHHHHhhheeeEEEEec
Q 014515 395 QGREKGSYSLSNYLQVKAVVTAL 417 (423)
Q Consensus 395 ~g~~~g~~~l~~~~~~k~v~~~~ 417 (423)
+|...|..++.+|.+.|+|++.+
T Consensus 859 fgkd~ge~alneyl~~ktit~ey 881 (881)
T KOG2452|consen 859 FGKDLGEAALNEYLRVKTVTFEY 881 (881)
T ss_pred cccchhHHHHhhheeeEEEEeeC
Confidence 99999999999999999998753
|
|
| >KOG2453 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-61 Score=435.53 Aligned_cols=413 Identities=30% Similarity=0.500 Sum_probs=381.3
Q ss_pred CHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCC-CCCceeEeecc
Q 014515 2 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEP 80 (423)
Q Consensus 2 ~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P 80 (423)
|...|.++.+++.|.|+...+-|-+++++|+||-+.|... |+++-++.++|..++.+.+.+...|.. .++.....+-|
T Consensus 75 papkrgeivrqigdalr~klq~lg~lvslemgkilaegvg-evqeyvdicdyavglsr~l~g~i~pserpghalleqwnp 153 (507)
T KOG2453|consen 75 PAPKRGEIVRQIGDALRTKLQNLGKLVSLEMGKILAEGVG-EVQEYVDICDYAVGLSRSLEGKIFPSERPGHALLEQWNP 153 (507)
T ss_pred CCCccchHHHHHHHHHHHHHHHHhhhhhhhhhhHhhhcch-hHHHHHHHHHHhhhhhhhhCCcccCCCCCchhHHHhcCC
Confidence 5668999999999999999999999999999999999875 999999999999999999988877644 45667788999
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHH----HHHHHcCCCCCcEEEEeCCchhHHHHhhc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVS----KLLHEAGLPPGVLNIVSGYGPTAGAALAS 156 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~----~~l~~ag~P~g~v~~v~~~~~~~~~~l~~ 156 (423)
+|+|.+|+.+|||....-|.-..|+.+||+|++||.+.+|+++...- +.|.+-.+|.+......| +.+.+.++..
T Consensus 154 lg~vgvitafnfpcavygwnnaiaMv~gncVvWKpApttpLtTiAvtklIaevL~qnnl~~aicsltcG-~aDigrAaak 232 (507)
T KOG2453|consen 154 LGVVGVITAFNFPCAVYGWNNAIAMVCGNCVVWKPAPTTPLTTIAVTKLIAEVLEQNNLPGAICSLTCG-GADIGRAAAK 232 (507)
T ss_pred cceEEEEEeccCCceeeccCchhhhhhcceeEecCCCCcceeHHHHHHHHHHHHhccCCCcceeeeccc-chhhhhhccc
Confidence 99999999999999999899999999999999999999998776654 455556799999999988 7789999999
Q ss_pred ccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCcc
Q 014515 157 HMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 236 (423)
Q Consensus 157 ~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~ 236 (423)
+.+++.+.||||++.++.+.+...+ +..+..+|+||+|+.||.+|||+..++...++++...+||+|+..+|++||+++
T Consensus 233 dgRvnlvsftGssQvgKsvgq~vqa-rfgk~llelggnnaiiv~edadl~lvvps~lfaavgtagqrctt~rrl~~hesv 311 (507)
T KOG2453|consen 233 DGRVNLVSFTGSSQVGKSVGQQVQA-RFGKLLLELGGNNAIIVNEDADLNLVVPSTLFAAVGTAGQRCTTTRRLIVHESV 311 (507)
T ss_pred cCceeecccccchhhhhHHHHHHHH-HhhhHHHhhcCCceEEEeccccceeeehHHHHHHhcccccchhhhhHHHhhHHH
Confidence 9999999999999999999998877 557889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCccc
Q 014515 237 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDML 316 (423)
Q Consensus 237 ~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~ 316 (423)
||+++++|++...++++|+|+|+.+-+||+-+.+.....+.-++++++.|.++..||+..+.+|+|++|||++ ..+|.+
T Consensus 312 yd~vlerlkkayaq~~ignpld~ntl~gplht~qav~~f~~~veeak~~ggki~yggkv~er~gnfveptivt-l~hda~ 390 (507)
T KOG2453|consen 312 YDQVLERLKKAYAQFEIGNPLDSNTLIGPLHTQQAVGKFKASVEEAKASGGKIEYGGKVLERDGNFVEPTIVT-LKHDAP 390 (507)
T ss_pred HHHHHHHHHHHHHheecCCcCCCCceeccccCHHHHHHHHHHHHHHHhcCCeEEECCEeeccCCCcccceEEE-ecCCcc
Confidence 9999999999999999999999999999999999999999999999999999999999988999999999998 889999
Q ss_pred ccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhc--ceeEEEEcCcCC-CCCCCCCCCCCCC
Q 014515 317 IAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL--RVGSVWINCFDV-FDAAIPFGGYKQS 393 (423)
Q Consensus 317 ~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l--~~g~v~iN~~~~-~~~~~pfgG~~~S 393 (423)
++.+|.|.||+.|.+|++++||+++-|+.+.||+.||||+|...+-+...-. ++|.|.||.+.. ..-+..|||-|..
T Consensus 391 vv~~etfapilyvlkf~~~eea~ainnev~qglsssift~n~~nifrw~gpkgsdcgivnvniptsgaeiggafggek~t 470 (507)
T KOG2453|consen 391 VVLRETFAPILYVLKFSTLEEAIAINNEVDQGLSSSIFTTNIQNIFRWMGPKGSDCGIVNVNIPTSGAEIGGAFGGEKET 470 (507)
T ss_pred hhhhhhccceeeEEeccchhhhheeccccccccchhhhhcCHHHHHhhhCCCCCccceEEecCCCCchhhcccccCcccc
Confidence 9999999999999999999999999999999999999999999888876544 799999997543 3356799999999
Q ss_pred CCCCcchHHHHHhhheeeEEEEecC
Q 014515 394 GQGREKGSYSLSNYLQVKAVVTALK 418 (423)
Q Consensus 394 G~g~~~g~~~l~~~~~~k~v~~~~~ 418 (423)
|.||+.|.++.++|++..+.++++.
T Consensus 471 gggresgsdswkqymrrstctinys 495 (507)
T KOG2453|consen 471 GGGRESGSDSWKQYMRRSTCTINYS 495 (507)
T ss_pred CCCcccCchHHHHHHhhceeeeecc
Confidence 9999999999999999998888874
|
|
| >COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-36 Score=281.87 Aligned_cols=364 Identities=20% Similarity=0.258 Sum_probs=288.4
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHc------CCChhhhhhc-------hHHHHHHHHHHHHHHhhhhcCcc--
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDN------GKPFEQSAQT-------EVPMTTRLFRYYAGWADKIQGLT-- 65 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~------Gk~~~~~~~~-------ev~~~~~~l~~~~~~~~~~~~~~-- 65 (423)
+|.++|.+.|.++++.|+++.+++.++..+|. |.+ ++..+ .++.+++-++..+.+.++.....
T Consensus 22 ~st~~Kn~aL~a~A~~L~~~~~~IL~AN~~Dl~~are~gl~--~~m~DRL~L~~~Ri~~ma~gl~~Va~L~DPvGev~~~ 99 (417)
T COG0014 22 LSTEEKNRALLAMADALEAARAEILAANAKDLAAARENGLS--EAMLDRLALTPSRIEAMADGLRQVAALPDPVGEVIDG 99 (417)
T ss_pred cChhhHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHcCCc--HHHHHHHcCCHHHHHHHHHHHHHHhcCCCchHhhhcc
Confidence 46789999999999999999999999887663 433 22221 22333333444443333322111
Q ss_pred CCCCCCCceeEeeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHH----HcCCCCCcEE
Q 014515 66 APADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH----EAGLPPGVLN 141 (423)
Q Consensus 66 ~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~----~ag~P~g~v~ 141 (423)
...+.+...+.++.|+||+++| +....+.++.....||++||+||+|-+..+..+...+.++++ ++|+|.+.||
T Consensus 100 ~~~~nGL~i~~~rvPLGVigvI--YEsRPnVtvdaaaLclKsGNAvILRGGsea~~Sn~ai~~~i~~aL~~~~lP~~aVq 177 (417)
T COG0014 100 WTLPNGLQIYRVRVPLGVIGVI--YESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNAAIVEVIQEALEKAGLPADAVQ 177 (417)
T ss_pred ccCCCCCEEEEEEccceEEEEE--EecCCccHHHHHHHHHhcCCEEEEeCcHHHhhhHHHHHHHHHHHHHHcCCCHHHhh
Confidence 2245678889999999999999 888888888889999999999999999999999988887655 5699999999
Q ss_pred EEeCCchhHH-HHhhcccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhcc
Q 014515 142 IVSGYGPTAG-AALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ 220 (423)
Q Consensus 142 ~v~~~~~~~~-~~l~~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~ 220 (423)
+++..+++.. +.|..+..+|.|.-.||....+.|.+.+ -.||+-.+-|++.+||+.+||+|.|.+-++.++....
T Consensus 178 li~~~~R~~v~~ll~l~~yiD~iIPRGg~~Li~~v~~~a----~vPVi~~~~G~CHiyvd~~ADld~A~~ii~nAKtqrP 253 (417)
T COG0014 178 LIEDTDREEVLELLRLDGYIDLVIPRGGAGLIRRVVENA----TVPVIEHGVGNCHIYVDESADLDKALKIIVNAKTQRP 253 (417)
T ss_pred hccCCCHHHHHHHHhhcCceeEEEcCCcHHHHHHHHhCC----cCCEEecCcceEEEEecccCCHHHHHHHHHcccCCCC
Confidence 9997655544 5555556699999999999988887753 4799999999999999999999999999999999998
Q ss_pred CCcccCCCeEEEeCccHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCC
Q 014515 221 GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 300 (423)
Q Consensus 221 Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g 300 (423)
+ .|++.+.++||+.+.++|+..|.+.+.. .|.++....+...
T Consensus 254 s-~CNA~EtLLVh~~ia~~fLp~l~~~l~~----------------------------------~gvelr~d~~~~~--- 295 (417)
T COG0014 254 S-VCNAAETLLVHRAIAKSFLPKLANALQE----------------------------------AGVELRGDAEALA--- 295 (417)
T ss_pred c-ccchHHHHHcCHHHHHHhHHHHHHHHHh----------------------------------cCeEEEcCHHHHH---
Confidence 7 8999999999999999999999887652 2334432222100
Q ss_pred ceeecEEEec--CCCcccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCc
Q 014515 301 YYIKPTVFTG--VKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCF 378 (423)
Q Consensus 301 ~~~~Ptvl~~--~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~ 378 (423)
++.. .+....-|..|...+++.|..++++++||+.||+.+.+++-+|.|+|...+++|.+++++..||||.+
T Consensus 296 ------~~~~~~~~A~e~Dw~tEyLd~ilavkvVd~ld~AI~HIn~y~S~HsdaIiTe~~~~a~~F~~~VDSAaVyvNAS 369 (417)
T COG0014 296 ------LLPDAVKPATEEDWDTEYLDLILAVKVVDSLDEAIAHINTYGSGHSDAIITEDYANAERFVNEVDSAAVYVNAS 369 (417)
T ss_pred ------hccccCCCCchhhHHHHhhhheeEEEEeCCHHHHHHHHHHhCCCCCcceeeCCHHHHHHHHhhcchheEEEecc
Confidence 0111 12223336789999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCC----CCCcchHHHHHhhheeeEEEEe
Q 014515 379 DVFDAAIPFGGYKQSG----QGREKGSYSLSNYLQVKAVVTA 416 (423)
Q Consensus 379 ~~~~~~~pfgG~~~SG----~g~~~g~~~l~~~~~~k~v~~~ 416 (423)
+.|..+.-||=-.+-| ..+.+|+.||+++|..|+++..
T Consensus 370 TRFtDG~~fG~GaEiGISTqKlHARGPmGLe~LTs~Kyiv~G 411 (417)
T COG0014 370 TRFTDGGQFGLGAEIGISTQKLHARGPMGLEALTSYKYIVRG 411 (417)
T ss_pred cccccCccccCceEEEeecCcccCCCCCChhhhcceeEEEeC
Confidence 9999888886333333 4478899999999999998643
|
|
| >cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-33 Score=280.46 Aligned_cols=341 Identities=17% Similarity=0.148 Sum_probs=241.9
Q ss_pred CCHHHHHHHHHHHHHHHH----HcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHH--HHHHHhhhhcCcc--CC--CCC
Q 014515 1 MTAYERSKIILRFADLLE----RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFR--YYAGWADKIQGLT--AP--ADG 70 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~----~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~--~~~~~~~~~~~~~--~~--~~~ 70 (423)
++.++..+.+.++.+.+. .++.+..+.+..-+|.+...... ++......++ .......+..+.. +. ...
T Consensus 24 ~~~~~iv~~l~~~~~~~~~~~~~~r~~~l~~l~~~~~~~~~~~~~-a~~~l~~~~~r~~l~~~l~~el~~~~~Ld~w~~~ 102 (422)
T cd07080 24 LPVEEIVDFLDRAGKRLLDPDYPLRQQAERLLPTVTGYSEEMLRE-GLKRLMALFRRENLERILERELGSPGILDEWVPP 102 (422)
T ss_pred CCHHHHHHHHHHHHHHhcCCCchHHHHHHHhhhhccCCCHHHHHH-HHHHHHHHcCHHHHHHHHHHhcCCcccccCCccC
Confidence 356677777777777765 34455666677777877543322 3333333332 1111111111110 10 111
Q ss_pred CCceeEeeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCC----CcEEEE--e
Q 014515 71 PYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPP----GVLNIV--S 144 (423)
Q Consensus 71 ~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~----g~v~~v--~ 144 (423)
+...++.++|+|+|++|+|||+|+ ..++.+++||++||++|+|||+.+|.++..|.++|.++ +|+ +.++++ +
T Consensus 103 ~~~~~~~~~P~Gvv~~I~p~N~P~-l~~~s~~~aLlaGN~~ilKpS~~~p~~~~~l~~~l~~~-~p~~~~~~~~~vv~~~ 180 (422)
T cd07080 103 GRGGYIRAQPRGLVVHIIAGNVPL-LPVWSIVRGLLVKNVNLLKMSSSDPLTATALLRSLADV-DPNHPLTDSISVVYWP 180 (422)
T ss_pred CCCCeeEEcCCceEEEEccCCccc-cHHHHHHHHHHhcCceEEECCCccchHHHHHHHHHHhc-CCCCcccceEEEEEec
Confidence 345678899999999999999999 78999999999999999999999999999999999999 787 888888 4
Q ss_pred CCchhHHHHhhcccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCc-ceEEEcCCC----CHHHHHHHHHHHHHhc
Q 014515 145 GYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGK-SPFIVCEDA----DVDKAAELAHYALFFN 219 (423)
Q Consensus 145 ~~~~~~~~~l~~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~-~~~iv~~~a----d~~~aa~~iv~~~~~~ 219 (423)
|.++++++.|..++ |.|+||||+++++.|++.++. + +.++|+||| +++|+++++ |++.+++.++++++.+
T Consensus 181 g~~~~~~~~l~~~~--D~i~~~Gs~~~~~~i~~~a~~-~--~~~Le~Ggk~s~~vi~~~a~~~~dl~~aa~~~a~~~~~~ 255 (422)
T cd07080 181 GGDAELEERILASA--DAVVAWGGEEAVKAIRSLLPP-G--CRLIDFGPKYSFAVIDREALESEKLAEVADALAEDICRY 255 (422)
T ss_pred CCchHHHHHHHHhC--CEEEEeCCHHHHHHHHHhCCC-C--CeeeecCCceeEEEecHHhhccccHHHHHHHHHHHHHHH
Confidence 65566888898876 999999999999999998875 3 569999999 556666668 9999999999999999
Q ss_pred cCCcccCCCeEEEeCcc---HHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccc
Q 014515 220 QGQCCCAGSRTFVHESV---YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 296 (423)
Q Consensus 220 ~Gq~C~a~~~v~V~~~~---~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~ 296 (423)
+||.|+|+++||||+++ +++|.++|.++++++.-..|... + +.+...++...-..+...+.+... .
T Consensus 256 ~gQ~C~sp~~v~V~~~~~~~~~~f~~~l~~~l~~~~~~~p~~~------~-~~~~~~~~~~~r~~~~~~~~~~~~----~ 324 (422)
T cd07080 256 DQQACSSPQVVFVEKDDDEELREFAEALAAALERLPRRYPALS------L-SAAESAKIARARLEAEFYELKGGV----S 324 (422)
T ss_pred hhhhccCCeEEEEECCCCchHHHHHHHHHHHHHHHHHhCCCCC------C-CHHHHHHHHHHHHHHHHHHHhcCC----C
Confidence 99999999999999999 99999999999988754333211 1 334444444333332222222111 1
Q ss_pred CCCCceeecEEEecCCCcccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcce
Q 014515 297 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRV 370 (423)
Q Consensus 297 ~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~ 370 (423)
.+. .-||+....+. + .....+=.+.|+++++++|++..++. +-.|++++..+.+. .++++++..
T Consensus 325 ~~~----~~~v~~~~~~~--~-~~~~~~r~v~v~~v~~l~~~l~~~~~--~lQTvg~~~~~~~~-~~~~~~l~~ 388 (422)
T cd07080 325 RDL----GWTVIISDEIG--L-EASPLNRTVNVKPVASLDDVLRPVTP--YLQTVGLAPSPAEL-AELADALAA 388 (422)
T ss_pred CCC----CeEEEEeCCCC--c-cCCCCcCEEEEEEcchHHHHHHhhhh--hcceeEeecChhhH-HHHHHHHHH
Confidence 111 12344322222 1 11345558899999999999999986 66799999988887 777777753
|
Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN. |
| >KOG4165 consensus Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-27 Score=218.96 Aligned_cols=364 Identities=20% Similarity=0.221 Sum_probs=275.1
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHH------HHcCCChhhhhhch-----HHHHHHHHHHHHHHhhhhcCcc---C
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALET------WDNGKPFEQSAQTE-----VPMTTRLFRYYAGWADKIQGLT---A 66 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~------~e~Gk~~~~~~~~e-----v~~~~~~l~~~~~~~~~~~~~~---~ 66 (423)
+|.++|.++|.++++.|..+..++.++.. +++|.......... +.....-++..+. +....+.. .
T Consensus 19 Ls~e~R~~il~~iad~L~~~~~~I~~aN~~Dla~Ake~GL~~sll~RL~l~~~K~~sl~~g~~~ia~-~edpvGRVl~~~ 97 (433)
T KOG4165|consen 19 LSNEDRADILHHIADLLVDNEKEILAANKKDLAEAKEAGLAESLLKRLDLSPGKISSLAAGLRQIAE-LEDPVGRVLKKT 97 (433)
T ss_pred cChhhHHHHHHHHHHHHHhhHHHHHhcchhhHHHHHhcCccHHHHHHhcCChHHHHHHHHHHHHHHh-cccchhhheeee
Confidence 57899999999999999998888877654 34553322211111 1111112222222 11111211 1
Q ss_pred CCCCCCceeEeeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHc----CCCCCcEEE
Q 014515 67 PADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNI 142 (423)
Q Consensus 67 ~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~a----g~P~g~v~~ 142 (423)
....+...+....|+||.++| |....-.+......|++.||.+++|-...+..+...|.++..++ |.|.+.+++
T Consensus 98 ~ladgL~L~qvt~PiGvLLVI--FESRPd~l~qiasLAi~SgN~llLKGGkEa~~Sn~~L~~~v~~al~~~~~~~~aV~L 175 (433)
T KOG4165|consen 98 RLADGLELEQVTVPIGVLLVI--FESRPDCLPQIASLAIASGNGLLLKGGKEAAHSNAALHKLVQEALGTHGGPGKAVQL 175 (433)
T ss_pred eccCCceEEEeeccceEEEEE--eccCchHHHHHHHHHHhcCCeEeecCchhhhhhHHHHHHHHHHHhhhccCchhhhhh
Confidence 234567788889999999999 76666666666778999999999999999999999888887776 678999999
Q ss_pred EeCCchhHHHHhhcccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCC
Q 014515 143 VSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQ 222 (423)
Q Consensus 143 v~~~~~~~~~~l~~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq 222 (423)
+.. .+++.+.|..+..+|.|.-.||+...+.|... ..+||..+-.|.+.++|++|||+++|.+.+..+++.+..
T Consensus 176 V~s-REev~dLl~ld~~IDLvIPRGSs~LVr~Ik~~----tkIPVLGHA~GichvYvd~dad~~kA~riv~DaK~dYPA- 249 (433)
T KOG4165|consen 176 VTS-REEVSDLLKLDDYIDLVIPRGSSDLVRSIKDT----TKIPVLGHAEGICHVYVDKDADLDKAKRIVRDAKCDYPA- 249 (433)
T ss_pred eec-HHHHHHHhhhhhheeEEecCCcHHHHHHHhhc----ccCcccccccceeEEEeccccCHHHHHHHHhcccCCCch-
Confidence 986 67778888777789999999999999988764 458999999999999999999999999988888876654
Q ss_pred cccCCCeEEEeCcc-HHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCc
Q 014515 223 CCCAGSRTFVHESV-YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY 301 (423)
Q Consensus 223 ~C~a~~~v~V~~~~-~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~ 301 (423)
.|++.+.+++|++. ...|++.|...+. .+|.++.+|-.. ..
T Consensus 250 aCNAmETLLIh~dl~~~~~~~~l~~~l~----------------------------------~~gVtl~agpkl-~~--- 291 (433)
T KOG4165|consen 250 ACNAMETLLIHKDLEQSPFFDDLINMLK----------------------------------EEGVTLHAGPKL-AA--- 291 (433)
T ss_pred hhhhHHHHhccHhhhhcchHHHHHHHHH----------------------------------hcCeEEecChhH-Hh---
Confidence 89999999999983 4556555554332 345555444322 11
Q ss_pred eeecEEEecCCCcccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC
Q 014515 302 YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF 381 (423)
Q Consensus 302 ~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~ 381 (423)
++.-.++...-++.|.-.-.+++-.++|.++||+.+|..+.+++-.|.|+|.+.+++|...+++..|+.|....|
T Consensus 292 -----~l~~~p~e~~s~~~Ey~~l~~~ievV~~v~~Ai~HI~~hgS~HTD~IvTe~~~~Ae~Fl~~VDSa~vf~NASTRF 366 (433)
T KOG4165|consen 292 -----LLKFSPPEAKSFNTEYGSLECTIEVVDSVQSAIDHIHTHGSSHTDCIVTENEATAEHFLKHVDSACVFHNASTRF 366 (433)
T ss_pred -----hcCcCCchhhhhhhhhcchheeeeecccHHHHHHHHHhcCCcccceEEecCHHHHHHHHhccchhheeecccccc
Confidence 111113444556778888889999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCC----CcchHHHHHhhheeeEEEEe
Q 014515 382 DAAIPFGGYKQSGQG----REKGSYSLSNYLQVKAVVTA 416 (423)
Q Consensus 382 ~~~~pfgG~~~SG~g----~~~g~~~l~~~~~~k~v~~~ 416 (423)
..++-||=-.+-|+. +.+|+.|++-.+..|++...
T Consensus 367 aDGfRfGlGaEVGIST~rIHARGPvGveGLlttkw~lRG 405 (433)
T KOG4165|consen 367 ADGFRFGLGAEVGISTSRIHARGPVGVEGLLTTKWLLRG 405 (433)
T ss_pred cccccccccceeeeeccceeccCCccccceeeeeeEEec
Confidence 999999633344543 46799999999999987543
|
|
| >PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.7e-17 Score=164.57 Aligned_cols=373 Identities=18% Similarity=0.170 Sum_probs=241.7
Q ss_pred CCHHHHHHHHHHHHHHHHHc--HHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHH--HHHhhhhcCccCCCC---CCCc
Q 014515 1 MTAYERSKIILRFADLLERH--NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYY--AGWADKIQGLTAPAD---GPYH 73 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~--~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~--~~~~~~~~~~~~~~~---~~~~ 73 (423)
+|.++-.++|.++++.+... .....+.+..-+|.+...... +......++.- ....+...+.....+ ....
T Consensus 3 ~~~~~Ii~~l~~~~~~~~~~~~~~r~~~~l~~~~g~~~~~~~~--l~~~~~~~~r~~L~~~l~~el~~~~~Ld~~~~~~~ 80 (399)
T PF05893_consen 3 LPVEEIIDFLDRVGKRWLDPDYPRRAIELLPKITGYSPEMVEY--LEALMRWFRRENLERKLERELGNPESLDGWVPRGD 80 (399)
T ss_pred CCHHHHHHHHHHHHHHhcCCCchHHHHHhhhhhcCCCHHHHHH--HHHHHHhcCHHHHHHHHHHhcCCHhHhhccccccc
Confidence 57788889999999988853 333666777778887644321 23222222111 011111112111011 1122
Q ss_pred eeEeeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCC----CcEEEE--eCCc
Q 014515 74 VQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPP----GVLNIV--SGYG 147 (423)
Q Consensus 74 ~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~----g~v~~v--~~~~ 147 (423)
.+..+.|+|++++|.|.|.|+..... ++.+|++||..|+|+|...+.++..|.+.|.+. .|. ..+.++ ++.+
T Consensus 81 ~~~~~~p~g~v~Hi~agNvp~~~~~S-~~~~lL~gn~nivK~ss~d~~~~~~l~~~l~~~-~~~~~l~~~i~v~~~~~~d 158 (399)
T PF05893_consen 81 GYVRAFPRGLVFHIAAGNVPLVGFYS-LVRGLLSGNANIVKLSSRDPFLAPALLRSLAEI-DPEHPLADSIAVVYWPGGD 158 (399)
T ss_pred chhhccCCceEEEEcCCCccchHHHH-HHHHHHhCCceEEECCCCchhHHHHHHHHHHhh-CccchhhhcEEEEEecCCc
Confidence 56789999999999999999987665 677888999999999999999999999999886 553 446666 4556
Q ss_pred hhHHHHhhcccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCC
Q 014515 148 PTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAG 227 (423)
Q Consensus 148 ~~~~~~l~~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~ 227 (423)
.++.+.+.. ..|.++.+||.++.+.+.+.+. ..++.+....-.+..++..+++++.+++.+..-.+...+|.|.||
T Consensus 159 ~~~~~~~~~--~~D~vv~wGgd~ti~~ir~~~~--~~~~~i~fg~k~S~avi~~~~~~~~~a~~~a~Di~~~dQ~aCsSp 234 (399)
T PF05893_consen 159 EELEEALSQ--QADAVVAWGGDETIRAIRQPLP--PGARLIEFGPKYSFAVIDAEAELEEAARRLANDIFLFDQQACSSP 234 (399)
T ss_pred hHHHHHHHH--HCCEEEEeCCHHHHHHHHHHcC--CCCcEeeeCCceEEEEEcCchhHHHHHHHHHHHHHHhhCcccCCC
Confidence 667777764 5899999999999999999443 346677777888889999999999999999999999999999999
Q ss_pred CeEEEeC---ccHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHH-----HHHHhCCCEEEeCCcccCCC
Q 014515 228 SRTFVHE---SVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI-----RSGVDGGAKLETGGERLGAK 299 (423)
Q Consensus 228 ~~v~V~~---~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i-----~~a~~~ga~~~~gg~~~~~~ 299 (423)
+.|||.. .-.++|.++|.+.+.+..---|... .+......+.... ..+...+.++..+...
T Consensus 235 ~~ifv~~g~~~~~~~f~~~L~~~L~~~~~~~p~~~-------~s~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~---- 303 (399)
T PF05893_consen 235 QVIFVETGDGDSVEEFAERLAEALERAAERYPRGE-------LSIDEAAAISSLRAEAELRYALDGEYRVWSSDDN---- 303 (399)
T ss_pred eEEEEECCCcccHHHHHHHHHHHHHHHHHhCCCcC-------CCHHHHHHHHHHHHHHHHHHHhcCCcceeecCCC----
Confidence 9999993 3467888888777765422111111 1122222222222 2343434444422211
Q ss_pred CceeecEEEecCCCcccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhc-ceeEEEEcCc
Q 014515 300 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL-RVGSVWINCF 378 (423)
Q Consensus 300 g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l-~~g~v~iN~~ 378 (423)
..||+....+ ......++=.+.|+++++.+|++..++....-.|++++... +....+++.+ ..|.--|
T Consensus 304 ----~~~V~~~~~~---~~~~~pl~r~v~v~~v~~~~e~~~~l~~~~~lQTvgi~~~~-~~~~~~~~~l~~~Gv~Ri--- 372 (399)
T PF05893_consen 304 ----SWTVIVSPEP---PLLPSPLNRTVYVVPVDSLEELVPYLRPKRGLQTVGIYPWS-ERLEELARALAAAGVDRI--- 372 (399)
T ss_pred ----CEEEEECCCc---ccccCCCCCEEEEEEcCCHHHHHHHhhhcCCCeeEEEecCh-hhHHHHHHHHHhcCCeee---
Confidence 2345543221 12234455689999999999999999987542478887544 4455555544 3332222
Q ss_pred CCCCCCCCCCCCCCCCC-CCcchHHHHHhhhe
Q 014515 379 DVFDAAIPFGGYKQSGQ-GREKGSYSLSNYLQ 409 (423)
Q Consensus 379 ~~~~~~~pfgG~~~SG~-g~~~g~~~l~~~~~ 409 (423)
.|.|-+..--. +..-|.+-|.+|++
T Consensus 373 ------v~~G~m~~~~~g~~hDG~~~L~~lvR 398 (399)
T PF05893_consen 373 ------VPLGQMLDFDPGWPHDGMYPLRRLVR 398 (399)
T ss_pred ------CCCCcCCCCCCCCCcCCHhHHHHHhC
Confidence 23333221111 24457788888776
|
The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process |
| >KOG2449 consensus Methylmalonate semialdehyde dehydrogenase [Amino acid transport and metabolism; Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.49 E-value=6.8e-14 Score=113.13 Aligned_cols=146 Identities=27% Similarity=0.296 Sum_probs=118.3
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHh-CCCEEEeCCcccCCCCceeecEEEecCCCcc
Q 014515 237 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVD-GGAKLETGGERLGAKGYYIKPTVFTGVKDDM 315 (423)
Q Consensus 237 ~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~-~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~ 315 (423)
.....+.|++..+.+++-+...+.++. .+..+|+.+++++-.- .|-.+..-|. ..|+|..||+|. ++|+|
T Consensus 8 aksW~~~lve~ak~l~v~~g~kp~tD~-----~a~~~ri~~liqS~~~~~~r~~yl~~y---a~~~f~~~tiLs-vtP~m 78 (157)
T KOG2449|consen 8 AKSWHPTLVEDAKVLKVNAGEKPQTDK-----YAPKVRIDKLIQSEDPLDGRFIYLPGY---AEGNFVGPTILS-VTPNM 78 (157)
T ss_pred hhhhhHHHHHhhhheEeccCCCCCccc-----hhHHHHHHHHhcCcCccCCceEEeecc---ccCCcccceEEE-ecCCc
Confidence 456677788888889998888888887 5667888888875211 1222222222 478999999998 89999
Q ss_pred cccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCc-CCCCCCCCCCCCC
Q 014515 316 LIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCF-DVFDAAIPFGGYK 391 (423)
Q Consensus 316 ~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~-~~~~~~~pfgG~~ 391 (423)
.++.||+||||+....-++++|+|.++|+++||-...|||.+.+.++++....++|.+.+|.. |.-.+...|.|-+
T Consensus 79 s~ykeeI~gpVlv~l~~~tldd~I~Iin~nPygn~t~i~Tsn~atark~~~e~~a~qig~~~~ip~ilk~~sfsg~~ 155 (157)
T KOG2449|consen 79 SCYKEEIFGPVLVRLETETLDDAIFIINNNPYGNGTAIFTSNGATARKFCHEPDAGQIGANVPIPVILKMFSFSGDR 155 (157)
T ss_pred ceeHhhhhcceEEEEeecCCCceeEEEecCCCCceeEEEecCcHHhhhhhcCCCccceeccccccccccceeccccC
Confidence 999999999999999999999999999999999999999999999999999999999999974 4444555566544
|
|
| >PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster | Back alignment and domain information |
|---|
Probab=99.25 E-value=2.3e-10 Score=101.69 Aligned_cols=173 Identities=19% Similarity=0.226 Sum_probs=130.4
Q ss_pred cceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHH
Q 014515 194 KSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFE 273 (423)
Q Consensus 194 ~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~ 273 (423)
..-+||+++.|++.|+..++.+.-.--| ..+.-.|+|||++.|+|+++++.+++.+ ++. +.+...+.
T Consensus 5 P~lMIvfe~GDlnsA~~~L~~sl~~Pf~--~~~VatVlVqEsireefi~rvr~~m~pl------~~~-----va~Hpny~ 71 (215)
T PF07368_consen 5 PQLMIVFEDGDLNSAMHYLLESLHNPFA--PGAVATVLVQESIREEFIERVRSRMKPL------SPQ-----VANHPNYL 71 (215)
T ss_pred CeEEEEEeCCCHHHHHHHHHHHHhCccc--CCcEEEEEEeHHHHHHHHHHHHHhCccC------Chh-----hccCcHHH
Confidence 3568999999999999999999865544 4577789999999999999999988654 222 22334466
Q ss_pred HHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCcccccccccccCeeEEEecCCHHHHHHHHhcCCC-CceEE
Q 014515 274 KILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQY-GLAAG 352 (423)
Q Consensus 274 ~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~-gl~~~ 352 (423)
|..+.++ .-+++++.++... .-..-.|.++.+.+.+. +. +-..+|+++.+|++..||+++.++..- .-+++
T Consensus 72 rsl~~i~---~l~~~~I~~~~~~--~~~~aSPilV~d~~h~~--fg-~~PTgViTlhtFRt~~Ea~~l~~kE~l~f~SVs 143 (215)
T PF07368_consen 72 RSLKKIK---CLNAKTIVADFEN--VPPPASPILVCDFTHSY--FG-DGPTGVITLHTFRTPKEAIELCAKETLPFDSVS 143 (215)
T ss_pred HHHHHHH---hcCCeEEEecccC--CCCCCCCEEEcCCCHHH--cC-CCCCeEEEEEccCCHHHHHHHHhcCCCCcceEE
Confidence 6666665 4688998884321 12234688988766542 22 345579999999999999999997632 24999
Q ss_pred EecCCHHHHHHHHHhcceeEEEEcCcCC-CCCCCCC
Q 014515 353 VFTHNLDTANTLMRALRVGSVWINCFDV-FDAAIPF 387 (423)
Q Consensus 353 v~s~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~pf 387 (423)
||++..+.+-+++.++++..++|||... ..|-.++
T Consensus 144 iW~ekla~~Yel~~~l~~~~f~iNC~~V~L~PI~~~ 179 (215)
T PF07368_consen 144 IWNEKLASAYELAARLPCDTFYINCFNVDLSPIMPF 179 (215)
T ss_pred EeCcHHHHHHHHHHhCCCCEEEEEeccCCchhhhhh
Confidence 9999999999999999999999999754 3344443
|
The function of this family is unknown. |
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=98.67 E-value=1.9e-07 Score=104.43 Aligned_cols=110 Identities=16% Similarity=0.079 Sum_probs=87.1
Q ss_pred cCCCCCCCceeEeeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEe
Q 014515 65 TAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVS 144 (423)
Q Consensus 65 ~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~ 144 (423)
.+|+++|+++..+..|+|+++|++||| ...+.++..||++||+||+||++.++. .+. .+|..+.+.+
T Consensus 1063 ~LPGPTGEsN~L~l~~RG~vlcisp~~---~~~l~Qi~AALaaGn~vi~~~~~~~~~-------~~~--~Lp~~~~~~~- 1129 (1208)
T PRK11905 1063 ELPGPTGESNLLSLHPRGRVLCVADTE---EALLRQLAAALATGNVAVVAADSGLAA-------ALA--DLPGLVAARI- 1129 (1208)
T ss_pred cCCCCCCcceeEEecCCceEEEECCcH---HHHHHHHHHHHHhCCEEEEeCCcccHH-------HHH--hCcccccccc-
Confidence 477889999999999999999999999 457889999999999999999987652 222 2666555554
Q ss_pred CCchhHHHHhhcccCcceEeeecCchHHHHHHHHHhhCCC--CceEEec
Q 014515 145 GYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL--KPVTLEL 191 (423)
Q Consensus 145 ~~~~~~~~~l~~~~~v~~v~~tGs~~~~~~v~~~~a~~~~--~~~~~e~ 191 (423)
.++..+..+++++.|.|+|++++.+.+.+..+++.+ .|++.|.
T Consensus 1130 ----~~~~~~~~~~~i~~V~~~G~~~~a~~i~~~LA~R~G~Ivpliaet 1174 (1208)
T PRK11905 1130 ----DWTQDWEADDPFAGALLEGDAERARAVRQALAARPGAIVPLIAAE 1174 (1208)
T ss_pred ----ccccccccCCcccEEEEeCCHHHHHHHHHHHHhCCCCcceEEecC
Confidence 233467777789999999999999999999888653 3444444
|
|
| >PF00815 Histidinol_dh: Histidinol dehydrogenase; InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.077 Score=52.65 Aligned_cols=333 Identities=17% Similarity=0.129 Sum_probs=152.5
Q ss_pred HHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhh---hhchHHHHH--------HHHHHHHHHhhhhcCccCC------
Q 014515 5 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQS---AQTEVPMTT--------RLFRYYAGWADKIQGLTAP------ 67 (423)
Q Consensus 5 ~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~---~~~ev~~~~--------~~l~~~~~~~~~~~~~~~~------ 67 (423)
+-.+..+.+.+.++++.|+-....++...+-..+. ...|+..+. +.++......+..+..+.+
T Consensus 13 ~v~~~V~~Il~dVr~~GD~Al~~yt~kFD~~~~~~l~Vs~~ei~~A~~~l~~~~~~Ai~~A~~~I~~fh~~q~~~~~~~~ 92 (412)
T PF00815_consen 13 EVEETVREILEDVRERGDKALLEYTKKFDGVELESLRVSEEEIAAAYAKLDPELREAIEQAAENIRAFHEAQLPKKDWEV 92 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSSSS--SSSB--HHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHTT-----EEE
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCccccEecHHHHHhhhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCcEE
Confidence 34455666677777788877777776654321111 112343332 2233333333222222221
Q ss_pred -CCCCCceeEeeccceeEEEEccC-chhHH-hHHHhhhhhhccCCeEEE--eCCCCchHHHHHHHHHHHHcCCCCCcEEE
Q 014515 68 -ADGPYHVQTLHEPIGVAGQIIPW-NFPLL-MFAWKVGPALACGNTIVL--KTAEQTPLSALYVSKLLHEAGLPPGVLNI 142 (423)
Q Consensus 68 -~~~~~~~~~~~~P~Gvv~~i~p~-n~P~~-~~~~~l~~AL~aGN~vi~--kps~~~~~~~~~l~~~l~~ag~P~g~v~~ 142 (423)
...|.....++.|+--|++..|. .+|+. +.+...+||-.+|..=|+ .|+...-.....+.-..+.+|..+ |--
T Consensus 93 ~~~~G~~~g~~~~Pi~rvG~YVPGG~a~~pStvlM~aiPA~vAGV~~Iv~~TPp~~~G~i~p~vL~Aa~~~Gv~e--vy~ 170 (412)
T PF00815_consen 93 ETEPGVILGQRYRPIERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPPPKDGKINPAVLAAAHLAGVDE--VYK 170 (412)
T ss_dssp EEETTEEEEEEEEE-SEEEEE---SSS--THHHHHHHHHHHHHT-SEEEEEE-SS------HHHHHHHHHTT-SE--EEE
T ss_pred EecCCcEEEEEEEEhhheEEEccCCCCCccHHHHHcccchhhcCCCeEEEEcCCCccCCCCHHHHHHHHHcCCCE--EEe
Confidence 12355677889999999999994 33432 334457899999976554 454443233344455566666642 222
Q ss_pred EeCCchhHHHHhhc----ccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHh
Q 014515 143 VSGYGPTAGAALAS----HMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFF 218 (423)
Q Consensus 143 v~~~~~~~~~~l~~----~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~ 218 (423)
+ | |...-.+|.- -|+||.|+=.|+.-+..+=...... -.+- .+.+..--.+|-++++|.+..+..++.-+=+
T Consensus 171 v-G-GaqAIAAlAyGTeti~~VDkIvGPGN~yV~~AK~~v~g~-V~ID-~~AGPSEv~ViAD~~A~p~~vAaDLLaQAEH 246 (412)
T PF00815_consen 171 V-G-GAQAIAALAYGTETIPKVDKIVGPGNAYVTAAKRLVFGD-VGID-MIAGPSEVLVIADETANPEFVAADLLAQAEH 246 (412)
T ss_dssp ----HHHHHHHHHH--SSS---SEEE---SHHHHHHHHHHHHS--EES-------EEEEEE-TTS-HHHHHHHHHHHHTT
T ss_pred c-c-cHHHHHHHHcCCCCCCceeEEECCCcHHHHHHHHHhcCC-cccC-CCCCCCceEEEECCCCCHHHHHHHHHHHhcc
Confidence 2 2 3333333332 3789999998887543322222221 1111 1222233344556779999888877765544
Q ss_pred ccCCcccCCCeEEEeCccHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCC
Q 014515 219 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA 298 (423)
Q Consensus 219 ~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~ 298 (423)
... .+.++|-.+ +++.+++.+++.++--. +... +.++.+.+
T Consensus 247 d~~-----a~~vLvt~s--~~la~~V~~~v~~~l~~-----------l~r~-------~i~~~sl~-------------- 287 (412)
T PF00815_consen 247 DPD-----AQAVLVTTS--EELAEAVEAEVERQLEE-----------LPRR-------EIAEKSLE-------------- 287 (412)
T ss_dssp -TT------EEEEEES---HHHHHHHHHHHHHHHTT------------TTH-------HHHHHHHT--------------
T ss_pred CCC-----CceEEEECC--HHHHHHHHHHHHHHHHh-----------CCch-------HHHHHHHH--------------
Confidence 432 234666665 44444444444321100 0000 11111111
Q ss_pred CCceeecEEEecCCCcccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhc-ceeEEEEcC
Q 014515 299 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL-RVGSVWINC 377 (423)
Q Consensus 299 ~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l-~~g~v~iN~ 377 (423)
--.++.++|++||++++|..- +-...|.++|+. .+.+++ ++|.|++..
T Consensus 288 ---------------------------~g~ii~~~~l~ea~~~~N~~A-PEHLel~~~~~~---~~~~~i~~AGaiFlG~ 336 (412)
T PF00815_consen 288 ---------------------------NGAIIVVDSLEEAIELANEYA-PEHLELQVEDPE---ELLEKIRNAGAIFLGE 336 (412)
T ss_dssp ---------------------------T-EEEE-SSHHHHHHHHHHH---SEEEEESTTHH---HHGGG--S-SEEEEST
T ss_pred ---------------------------CCeEEEECCHHHHHHHHHHhh-HHHHHHHHcCHH---HHHHHhhccChhhcCC
Confidence 123556799999999999864 346788999984 666777 599999997
Q ss_pred cCCC---C-CCCCCCCCCCCCCCCcchHHHHHhhheeeEE
Q 014515 378 FDVF---D-AAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 413 (423)
Q Consensus 378 ~~~~---~-~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~v 413 (423)
+... + ...|-.=...+|..|+.|..+...|.+..++
T Consensus 337 ~tp~a~GDY~aGpNHvLPT~G~AR~~sgLsv~~FlK~~s~ 376 (412)
T PF00815_consen 337 YTPEALGDYAAGPNHVLPTGGTARFSSGLSVDDFLKRISV 376 (412)
T ss_dssp T--HHHHHHTSSS------TTGGGT---S-GGGGEEEEEE
T ss_pred CCCHHHhhhccCCCccCCCCccccccCCCcHHHccceeeE
Confidence 5421 1 0111111334667788888888899887655
|
In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His []. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules []. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme []. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step []. In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [].; GO: 0004399 histidinol dehydrogenase activity, 0008270 zinc ion binding, 0051287 NAD binding, 0000105 histidine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1KAE_B 1K75_A 1KAH_A 1KAR_B. |
| >COG0141 HisD Histidinol dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.1 Score=51.44 Aligned_cols=326 Identities=18% Similarity=0.189 Sum_probs=169.8
Q ss_pred HHHHHHHHHHHcHHHHHHHHHHHcCCChhh---hhhchHHHHHH--------HHHHHHHHhhhhcCccCC------CCCC
Q 014515 9 IILRFADLLERHNDEIAALETWDNGKPFEQ---SAQTEVPMTTR--------LFRYYAGWADKIQGLTAP------ADGP 71 (423)
Q Consensus 9 ~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~---~~~~ev~~~~~--------~l~~~~~~~~~~~~~~~~------~~~~ 71 (423)
..+.+.+.++.+.|.-....+....+...+ ....|++.+.+ .++..+...+..+..+.+ ...|
T Consensus 28 ~V~~Ii~~Vk~~GD~Al~eyt~~FD~~~~~~l~Vs~~ei~aA~~~v~~~~~eai~~A~~~I~~fH~~Q~p~~~~~~~~~G 107 (425)
T COG0141 28 TVRPIIEDVKERGDAALLEYTAKFDGVEPDNLRVSAAEIDAAYQRLDPEVKEALEVAAENIEAFHEAQLPKDWLVETEPG 107 (425)
T ss_pred hHHHHHHHHHHhHHHHHHHHHHHccCCCccccccCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhhCCCccceeccCC
Confidence 345555666666666555555555442111 01124443322 233333333333322222 2346
Q ss_pred CceeEeeccceeEEEEcc---CchhHHhHHHhhhhhhccCCeEEE--eCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 014515 72 YHVQTLHEPIGVAGQIIP---WNFPLLMFAWKVGPALACGNTIVL--KTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY 146 (423)
Q Consensus 72 ~~~~~~~~P~Gvv~~i~p---~n~P~~~~~~~l~~AL~aGN~vi~--kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~ 146 (423)
.....++.|+--|++..| .-||-..++. .+||-.+|+.=|+ .|++..- .+..+.-+.+.+|+.+ +++ + |
T Consensus 108 v~~g~~~~Pi~~VGlYVPGG~A~ypStvLM~-avPAkvAGv~~Iv~~tPp~~~g-v~p~iL~AA~~~Gv~e-Iy~-v-G- 181 (425)
T COG0141 108 VVLGQRWRPIERVGLYVPGGKAAYPSTVLMN-AVPAKVAGVEEIVVVTPPPKDG-VNPEILAAARLAGVDE-VYK-V-G- 181 (425)
T ss_pred cEEEEEEEEhhheEEEccCCCcCChHHHHHh-hccHhhcCCceEEEECCCCCCC-CCHHHHHHHHHhCcHH-HHH-c-c-
Confidence 677888999999999999 5666655554 6799999987554 4555422 2222333334444332 111 1 2
Q ss_pred chhHHHHhhcc----cCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcc-eEEEcCCCCHHHHHHHHHHHHHhccC
Q 014515 147 GPTAGAALASH----MEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKS-PFIVCEDADVDKAAELAHYALFFNQG 221 (423)
Q Consensus 147 ~~~~~~~l~~~----~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~-~~iv~~~ad~~~aa~~iv~~~~~~~G 221 (423)
|...-.+|... +.||.|+=.|+.-+..+=+.-. +..-+=+..|--. .+|-++++|.+..+..++.-+=+.-
T Consensus 182 GAQAIAAlAYGTetV~~VdkIvGPGN~yVtaAKr~v~---g~V~ID~~AGPSEvlViAD~ta~p~~vA~DLLsQAEHd~- 257 (425)
T COG0141 182 GAQAIAALAYGTETVPKVDKIVGPGNAYVTAAKRLVS---GVVGIDMIAGPSEVLVIADETANPDFVAADLLSQAEHDP- 257 (425)
T ss_pred CHHHHHHHHccCCcCCccCeeeCCCcHHHHHHHHHhh---CCcccCCCCCCceEEEEeCCCCCHHHHHHHHHHHhhcCC-
Confidence 33334455544 7899999888875433111111 1111111112222 3444455899988887765554442
Q ss_pred CcccCCCeEEEeCccHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCc
Q 014515 222 QCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY 301 (423)
Q Consensus 222 q~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~ 301 (423)
..+.|+|-.+ ++|.+++.+.+.+..- .+ .+ .+.+..+..
T Consensus 258 ----~a~aiLvT~s--~~la~~v~~~v~~~l~--------~l---------~~-~ei~~~~l~----------------- 296 (425)
T COG0141 258 ----DAQAILVTDS--EELAEAVEAAVERQLE--------TL---------PR-AEIARKALE----------------- 296 (425)
T ss_pred ----CceEEEEeCc--HHHHHHHHHHHHHHHH--------hc---------cH-HHHHHHHHH-----------------
Confidence 2445666555 4555555444432100 00 00 111111110
Q ss_pred eeecEEEecCCCcccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhc-ceeEEEEcCcCC
Q 014515 302 YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL-RVGSVWINCFDV 380 (423)
Q Consensus 302 ~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l-~~g~v~iN~~~~ 380 (423)
-+| .|+-++|++|+++++|..- +-..-|.++|+. .++.++ ++|.|+++.++.
T Consensus 297 --------------------~~g---~iilv~~l~ea~~~~N~~A-PEHLei~~~~p~---~~l~~I~nAGsIFlG~~sP 349 (425)
T COG0141 297 --------------------NYG---AIILVDDLDEAVEISNEYA-PEHLELQTENPR---ELLGKIRNAGSIFLGHYSP 349 (425)
T ss_pred --------------------hCC---eEEEECCHHHHHHHHHhhC-hHhhhhhhcCHH---HHHHHhcccceeeecCCCC
Confidence 111 3456799999999999864 346778898876 556666 589999998643
Q ss_pred CCCC----CCCCCCCCCCCCCcchHHHHHhhheeeE
Q 014515 381 FDAA----IPFGGYKQSGQGREKGSYSLSNYLQVKA 412 (423)
Q Consensus 381 ~~~~----~pfgG~~~SG~g~~~g~~~l~~~~~~k~ 412 (423)
..-+ .|-.=...+|+-|+.+..++..|...-+
T Consensus 350 e~~GDY~aG~NHVLPT~g~AR~~s~L~v~dF~K~~t 385 (425)
T COG0141 350 ESLGDYAAGPNHVLPTSGTARFSSGLSVYDFLKRST 385 (425)
T ss_pred ccccccccCCCccCCCCccchhcCCccHHHhhhHHH
Confidence 2111 1111133466667777777777776543
|
|
| >PRK00877 hisD bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.24 Score=49.42 Aligned_cols=328 Identities=17% Similarity=0.135 Sum_probs=171.3
Q ss_pred HHHHHHHHHHHHHcHHHHHHHHHHHcCCChhh---hhhchHHHHHH--------HHHHHHHHhhhhcCccCC------CC
Q 014515 7 SKIILRFADLLERHNDEIAALETWDNGKPFEQ---SAQTEVPMTTR--------LFRYYAGWADKIQGLTAP------AD 69 (423)
Q Consensus 7 ~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~---~~~~ev~~~~~--------~l~~~~~~~~~~~~~~~~------~~ 69 (423)
.+..+.+.+.++.+.|+-....++...+-..+ ....|++.+.. .++......+..+..+.+ ..
T Consensus 30 ~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~~~Vs~~ei~~A~~~v~~~~~~ai~~A~~~I~~Fh~~q~~~~~~~~~~ 109 (425)
T PRK00877 30 EAAVREILEDVRERGDAALLEYTEKFDGVELESLRVSEEEIEAAYERLDPELREALEEAAENIRAFHEAQKPESWDVETA 109 (425)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHhcCCCcccceeCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEec
Confidence 34555666667777777666666655432101 01123433321 222222222222211111 22
Q ss_pred CCCceeEeeccceeEEEEccC---chhHHhHHHhhhhhhccCCeEEE--eCCCCchHHHHHHHHHHHHcCCCCCcEEEEe
Q 014515 70 GPYHVQTLHEPIGVAGQIIPW---NFPLLMFAWKVGPALACGNTIVL--KTAEQTPLSALYVSKLLHEAGLPPGVLNIVS 144 (423)
Q Consensus 70 ~~~~~~~~~~P~Gvv~~i~p~---n~P~~~~~~~l~~AL~aGN~vi~--kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~ 144 (423)
.|.....++.|+--|++..|. -||-. .+...+||-.+|..=|+ .|+.... ....+.-+.+.+|..+ |--+
T Consensus 110 ~Gv~~g~~~~Pi~~vG~YVPGG~a~ypSt-vLM~aiPAkvAGV~~Iv~~TPp~~g~-i~p~vL~AA~~~Gv~e--Iy~v- 184 (425)
T PRK00877 110 PGVRLGQRWRPIERVGLYVPGGKAAYPSS-VLMNAIPAKVAGVKEIVMVTPPPDGE-INPAILAAAALAGVDE--VYKV- 184 (425)
T ss_pred CCeEEEEEEEehHHeEEEccCCCCCchHH-HHHhhcchhhcCCCeEEEEeCCCCCC-CCHHHHHHHHHcCCCe--eecc-
Confidence 455667888999999999997 34444 44557899999987554 4543111 2223333445566542 1112
Q ss_pred CCchhHHHHhh----cccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhcc
Q 014515 145 GYGPTAGAALA----SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ 220 (423)
Q Consensus 145 ~~~~~~~~~l~----~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~ 220 (423)
| |...-.+|. .-|+||.|+=.|+.-+..+=....+. -.+- ...+..--.+|-++++|.+..+..++.-+=+..
T Consensus 185 G-GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g~-V~ID-~~AGPSEvlViAD~~Anp~~vAaDLLaQAEHd~ 261 (425)
T PRK00877 185 G-GAQAIAALAYGTESIPKVDKIVGPGNIYVTAAKRLVFGV-VGID-MIAGPSEILVIADETADPDFVAADLLSQAEHDP 261 (425)
T ss_pred C-CHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHHcCC-cCcC-CCCCCceeEEEeCCCCCHHHHHHHHHHHhccCC
Confidence 2 333333343 23689999988886543311111111 0010 111122223444456899988877775544432
Q ss_pred CCcccCCCeEEEeCc--cHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCC
Q 014515 221 GQCCCAGSRTFVHES--VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA 298 (423)
Q Consensus 221 Gq~C~a~~~v~V~~~--~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~ 298 (423)
. .+.++|-.+ ..++..+++.+++..+. | .+.++.+.++
T Consensus 262 ~-----a~aiLvT~s~~la~~V~~~v~~ql~~l~---------------------r-~~ia~~sl~~------------- 301 (425)
T PRK00877 262 D-----AQSILVTTSEELAEAVAAEVERQLATLP---------------------R-AEIARASLEG------------- 301 (425)
T ss_pred C-----CcEEEEECCHHHHHHHHHHHHHHHHhCC---------------------h-HHHHHHHHHh-------------
Confidence 2 344566554 23444444443333221 0 0111222111
Q ss_pred CCceeecEEEecCCCcccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhc-ceeEEEEcC
Q 014515 299 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL-RVGSVWINC 377 (423)
Q Consensus 299 ~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l-~~g~v~iN~ 377 (423)
+| .++.++|+|||++++|..-. -..-|.++|+. .+..++ ++|.|++..
T Consensus 302 ------------------------~g---~iivv~~leeai~~~N~~AP-EHLel~~~~p~---~~l~~I~nAGaiFlG~ 350 (425)
T PRK00877 302 ------------------------QG---AIILVDDLEEAIELSNAYAP-EHLEIQTEDPR---ALLDRIRNAGAIFLGP 350 (425)
T ss_pred ------------------------CC---EEEEECCHHHHHHHHHhhCh-HheeehhCCHH---HHHhhcCccceeccCC
Confidence 22 23467999999999998643 35678898885 556666 599999986
Q ss_pred cCCC--CCC--CCCCCCCCCCCCCcchHHHHHhhheeeEE
Q 014515 378 FDVF--DAA--IPFGGYKQSGQGREKGSYSLSNYLQVKAV 413 (423)
Q Consensus 378 ~~~~--~~~--~pfgG~~~SG~g~~~g~~~l~~~~~~k~v 413 (423)
+... .++ .|-.=...+|..|+.+..++..|...-++
T Consensus 351 ~tp~a~GDY~aGpNHvLPT~G~AR~~sgLsV~~F~K~~s~ 390 (425)
T PRK00877 351 YTPESLGDYAAGPNHVLPTSGTARFSSGLSVYDFLKRSSV 390 (425)
T ss_pred CCchhhhhcccCCCcccCCCcceeecCCccHHHhccceeE
Confidence 5431 111 12222445788888888899999887665
|
|
| >PLN02926 histidinol dehydrogenase | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.27 Score=49.07 Aligned_cols=264 Identities=19% Similarity=0.186 Sum_probs=144.3
Q ss_pred CCCceeEeeccceeEEEEccC---chhHHhHHHhhhhhhccCCeEEE--eCCCCc-hHHHHHHHHHHHHcCCCCCcEEEE
Q 014515 70 GPYHVQTLHEPIGVAGQIIPW---NFPLLMFAWKVGPALACGNTIVL--KTAEQT-PLSALYVSKLLHEAGLPPGVLNIV 143 (423)
Q Consensus 70 ~~~~~~~~~~P~Gvv~~i~p~---n~P~~~~~~~l~~AL~aGN~vi~--kps~~~-~~~~~~l~~~l~~ag~P~g~v~~v 143 (423)
.|.....++.|+.-|++..|. -||-. .+...+||-.+|..=|+ .|+... ......|+ ..+.+|+.+ |--+
T Consensus 110 ~Gv~~g~~~~Pi~rvG~YVPGG~a~ypSt-vLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~-AA~~~Gv~e--Iy~v 185 (431)
T PLN02926 110 PGVRCRRVARPIGAVGLYVPGGTAVLPST-ALMLAVPAQIAGCKTVVLATPPRKDGSICPEVLY-CAKKAGVTH--ILKA 185 (431)
T ss_pred CCeEEEEEEechHHeeEeccCCCCCccHH-HHHhhcchhhcCCCeEEEEECCCcCCCCCHHHHH-HHHHcCCCe--eecc
Confidence 455667889999999999997 34443 45557899999987554 454321 12222233 456666542 1112
Q ss_pred eCCchhHHHHhhc----ccCcceEeeecCchHHHHHHHHHhhCCCCceEEec-CCcc--eEEEcCCCCHHHHHHHHHHHH
Q 014515 144 SGYGPTAGAALAS----HMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLEL-GGKS--PFIVCEDADVDKAAELAHYAL 216 (423)
Q Consensus 144 ~~~~~~~~~~l~~----~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~-gg~~--~~iv~~~ad~~~aa~~iv~~~ 216 (423)
| |...-.+|.- -|+||.|+=.|+.-+..+=....+...+ |-..+ -|.+ .+|-++++|.+.++..++.-+
T Consensus 186 -G-GaQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~G~~~~--VgID~~AGPSEvlIiAD~tA~p~~vAaDLLaQA 261 (431)
T PLN02926 186 -G-GAQAIAAMAWGTDSCPKVDKIFGPGNQYVTAAKMILQNSEAM--VSIDMPAGPSEVLVIADKTANPVHVAADLLSQA 261 (431)
T ss_pred -C-CHHHHHHHHcCCCCCCCCCEEECCCcHHHHHHHHHhhCCCCc--cccCCCCCCceeEEEeCCCCCHHHHHHHHHHHh
Confidence 2 3333333332 3689999988886543311111110000 11111 2322 344445689998887777554
Q ss_pred HhccCCcccCCCeEEEeCc--cHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCc
Q 014515 217 FFNQGQCCCAGSRTFVHES--VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGE 294 (423)
Q Consensus 217 ~~~~Gq~C~a~~~v~V~~~--~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~ 294 (423)
=+... .+.++|-.+ +.++..+++.++++.+. | .+..+.+.
T Consensus 262 EHdp~-----a~aiLvT~s~~la~~V~~~v~~ql~~l~---------------------r-~~i~~~sl----------- 303 (431)
T PLN02926 262 EHGPD-----SQVVLVAVGDVDLDAIEEEVEKQCQSLP---------------------R-GEIASKAL----------- 303 (431)
T ss_pred ccCCC-----CcEEEEECCHHHHHHHHHHHHHHHHhCC---------------------h-HHHHHHHH-----------
Confidence 44322 344556555 22333333333333211 0 01111111
Q ss_pred ccCCCCceeecEEEecCCCcccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhc-ceeEE
Q 014515 295 RLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL-RVGSV 373 (423)
Q Consensus 295 ~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l-~~g~v 373 (423)
.. -.++.++|++||++++|..-. -...|.++|+. .+..++ ++|.|
T Consensus 304 -----------------------------~~-g~iivv~~l~ea~~~~N~~AP-EHLei~~~~~~---~~l~~i~nAGai 349 (431)
T PLN02926 304 -----------------------------GH-SFIVVARDMAEAISFSNLYAP-EHLIVNVEDAE---SWLDKIDNAGSV 349 (431)
T ss_pred -----------------------------HC-CEEEEECCHHHHHHHHHhhCh-HhheehhcCHH---HHHhhcCcccee
Confidence 11 234567999999999998643 35668888875 566666 59999
Q ss_pred EEcCcCC--CCCC--CCCCCCCCCCCCCcchHHHHHhhheeeEE
Q 014515 374 WINCFDV--FDAA--IPFGGYKQSGQGREKGSYSLSNYLQVKAV 413 (423)
Q Consensus 374 ~iN~~~~--~~~~--~pfgG~~~SG~g~~~g~~~l~~~~~~k~v 413 (423)
++..+.. ..++ .|-.=...+|..|+.|..+...|.+.-++
T Consensus 350 FlG~~sp~a~GDY~aGpNHvLPT~G~AR~~sgLsv~~FlK~~s~ 393 (431)
T PLN02926 350 FLGRWTPESVGDYASGTNHVLPTYGYARMYGGVSLDSFLKYMTV 393 (431)
T ss_pred ccCCCCchhhhccccCcCcccCCCcceeecCCCcHHHhcceeeE
Confidence 9976532 1111 11111345677888888888889886654
|
|
| >TIGR00069 hisD histidinol dehydrogenase | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.28 Score=48.35 Aligned_cols=267 Identities=18% Similarity=0.137 Sum_probs=147.4
Q ss_pred CCCceeEeeccceeEEEEccC-c--hhHHhHHHhhhhhhccCCeEEE--eCCCCchHHHHHHHHHHHHcCCCCCcEEEEe
Q 014515 70 GPYHVQTLHEPIGVAGQIIPW-N--FPLLMFAWKVGPALACGNTIVL--KTAEQTPLSALYVSKLLHEAGLPPGVLNIVS 144 (423)
Q Consensus 70 ~~~~~~~~~~P~Gvv~~i~p~-n--~P~~~~~~~l~~AL~aGN~vi~--kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~ 144 (423)
.|.....++.|+--|++..|. . +|-. .+...+||-.+|+.=|+ .|+...-.....+.-..+.+|..+ |--+
T Consensus 78 ~Gv~~g~~~~Pi~rvGlYVPGG~a~~pSt-vLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~AA~~~Gv~e--Iy~v- 153 (393)
T TIGR00069 78 PGVILGQRVRPLERVGLYVPGGRAPYPST-VLMTAIPAKVAGVKEIVVCTPPGKDGKINPAVLAAAKLAGVDE--VYKV- 153 (393)
T ss_pred CCeEEEEEEEEeheEEEEeCCCCCcchHH-HHHhhcchhhcCCCeEEEEeCCCcCCCCCHHHHHHHHHcCCCe--ehhc-
Confidence 456677889999999999997 3 4443 44557799999987655 444221112222333446666542 1112
Q ss_pred CCchhHHHHhh----cccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhcc
Q 014515 145 GYGPTAGAALA----SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ 220 (423)
Q Consensus 145 ~~~~~~~~~l~----~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~ 220 (423)
| |...-.+|. .-|+||.|+=.|+.-+..+=....+. -.+. ...+..--.+|-++++|.+.++..++.-+=+..
T Consensus 154 G-GAQAIAAlAyGTesIp~VDkIvGPGN~yV~~AK~~v~g~-V~ID-~~AGPSEvlViAD~~Anp~~iAaDLLaQAEHd~ 230 (393)
T TIGR00069 154 G-GAQAIAALAYGTETVPKVDKIVGPGNIYVTAAKKLVFGD-VGID-MPAGPSEVLVIADETANPEFVAADLLSQAEHDP 230 (393)
T ss_pred C-CHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcCc-cCcC-CCCCCceEEEEeCCCCCHHHHHHHHHHHhccCC
Confidence 2 333333333 23689999988886543311111111 0010 111122333445566899988877765544332
Q ss_pred CCcccCCCeEEEeCc--cHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCC
Q 014515 221 GQCCCAGSRTFVHES--VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA 298 (423)
Q Consensus 221 Gq~C~a~~~v~V~~~--~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~ 298 (423)
..+.++|-.+ ..++..+++.+++..+. + .+..+.++++
T Consensus 231 -----~a~~iLvT~s~~la~~V~~~v~~ql~~l~------------------r----~~i~~~al~~------------- 270 (393)
T TIGR00069 231 -----DAQAILVTTSEELAEAVQEEIERQLATLP------------------R----REIARKSLED------------- 270 (393)
T ss_pred -----CCcEEEEECCHHHHHHHHHHHHHHHHhCC------------------h----HHHHHHHHHh-------------
Confidence 1344556444 34455555544444321 0 0112222211
Q ss_pred CCceeecEEEecCCCcccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhc-ceeEEEEcC
Q 014515 299 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL-RVGSVWINC 377 (423)
Q Consensus 299 ~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l-~~g~v~iN~ 377 (423)
+| .++.++|++||++++|..-. -..-|.++|+. .+..++ ++|.|++..
T Consensus 271 ------------------------~g---~ii~v~~l~ea~~~~N~~AP-EHLel~~~~p~---~~l~~I~nAGaiFlG~ 319 (393)
T TIGR00069 271 ------------------------NG---AIILVDDLEEAIEISNDYAP-EHLELQTKNPE---ELLPKIRNAGSIFLGP 319 (393)
T ss_pred ------------------------CC---EEEEECCHHHHHHHHHhhCh-HhheehhCCHH---HHHhhcCccceeccCC
Confidence 11 23467899999999998643 35668888875 566666 599999987
Q ss_pred cCCC--CCC--CCCCCCCCCCCCCcchHHHHHhhheeeEEE
Q 014515 378 FDVF--DAA--IPFGGYKQSGQGREKGSYSLSNYLQVKAVV 414 (423)
Q Consensus 378 ~~~~--~~~--~pfgG~~~SG~g~~~g~~~l~~~~~~k~v~ 414 (423)
+... .++ .|-.=...+|..|+.+..++..|.+..++.
T Consensus 320 ~tp~a~GDY~aG~NHvLPT~G~Ar~~sgL~v~~F~K~~s~~ 360 (393)
T TIGR00069 320 YTPEAAGDYAAGPNHVLPTGGTARFYSGLSVLDFLKRITVQ 360 (393)
T ss_pred CCchhhhhccCCCCcccCCCcceeecCCccHHHhccceeEE
Confidence 5431 111 111113456788888888889998876653
|
This model describes a polypeptide sequence catalyzing the final step in histidine biosynthesis, found sometimes as an independent protein and sometimes as a part of a multifunctional protein. |
| >PRK13770 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.33 Score=48.16 Aligned_cols=328 Identities=13% Similarity=0.099 Sum_probs=170.8
Q ss_pred HHHHHHHHHHHHcHHHHHHHHHHHcCCChhhh---hhchHHHHHH--------HHHHHHHHhhh----hcCccCCCCCCC
Q 014515 8 KIILRFADLLERHNDEIAALETWDNGKPFEQS---AQTEVPMTTR--------LFRYYAGWADK----IQGLTAPADGPY 72 (423)
Q Consensus 8 ~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~---~~~ev~~~~~--------~l~~~~~~~~~----~~~~~~~~~~~~ 72 (423)
+..+.+.+.++++.|+-....++...+-..+. ...|++.+.+ .++......+. +.........+.
T Consensus 23 ~~V~~Ii~~Vr~~GD~Al~~yt~~FD~~~~~~~~Vs~~ei~~A~~~v~~~~~~ai~~A~~nI~~fh~~q~~~~~~~~~gv 102 (416)
T PRK13770 23 PIIRDICQEVKVHGDKALKMYNLTFDHTKTDHLEISHEQIKAAFDTLDEKTKQALQQSYERIKAYQESIKQTNQQLEESV 102 (416)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHhcCCCcccceeCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCCeEecCCc
Confidence 45566667777777776666666544321010 0123333321 12222222222 111111123445
Q ss_pred ceeEeeccceeEEEEccC-chhHH-hHHHhhhhhhccCCeEEE--eCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCch
Q 014515 73 HVQTLHEPIGVAGQIIPW-NFPLL-MFAWKVGPALACGNTIVL--KTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGP 148 (423)
Q Consensus 73 ~~~~~~~P~Gvv~~i~p~-n~P~~-~~~~~l~~AL~aGN~vi~--kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~ 148 (423)
....++.|+--|++..|. .+|+. +.+...+||-.+|+.=|+ .|+.... ....+.-..+.+|+.+ |--+ | |.
T Consensus 103 ~~g~~~~Pi~rvGlYVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~~-i~p~iL~Aa~~~Gv~e--Iy~i-G-GA 177 (416)
T PRK13770 103 ECYEIYHPLESVGIYVPGGKASYPSTVLMTATLAQVAGVENIVVVTPPQPNG-VSQEVLAACYITQVNQ--VFQV-G-GA 177 (416)
T ss_pred EEEEEEeeeeeeEEEccCCCCCccHHHHHhhccHhhcCCCeEEEEeCcCCCC-CCHHHHHHHHHcCCCe--eecc-C-CH
Confidence 667788999999999996 33332 334557899999987655 4443211 2222233445555542 2112 2 33
Q ss_pred hHHHHhh----cccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcc
Q 014515 149 TAGAALA----SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCC 224 (423)
Q Consensus 149 ~~~~~l~----~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C 224 (423)
..-.+|. .-|+||.|+=.|..-+..+=....+. -.+. ...+..--.+|-++++|.+..+..++.-+=+...
T Consensus 178 QAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g~-V~ID-~~AGPSEvlViAD~~Anp~~iAaDLLaQAEHd~~--- 252 (416)
T PRK13770 178 QSIAALTYGTETIPKVDKIVGPGNQFVAYAKKYLFGQ-VGID-QIAGPTEIALIIDETADLDAIVYDVFAQAEHDEL--- 252 (416)
T ss_pred HHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcCC-cCcC-CCCCCceeEEEecCCCCHHHHHHHHHHHhccCCC---
Confidence 2233333 23689999988876543311111111 0111 1112223334455668999888777755443321
Q ss_pred cCCCeEEEeCc--cHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCce
Q 014515 225 CAGSRTFVHES--VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYY 302 (423)
Q Consensus 225 ~a~~~v~V~~~--~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~ 302 (423)
.+.++|-.+ +.++..+++..++..+. + ++.++.+.++
T Consensus 253 --a~~iLvT~s~~la~~V~~ev~~ql~~lp------------------r----~~i~~~al~~----------------- 291 (416)
T PRK13770 253 --ARTYVISEDAQVLKDLESRIAKALPNVD------------------R----YDIVSKSIAN----------------- 291 (416)
T ss_pred --CcEEEEeCCHHHHHHHHHHHHHHHHhCC------------------h----HHHHHHHHHh-----------------
Confidence 344566444 33444444444443321 0 0111222111
Q ss_pred eecEEEecCCCcccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhc-ceeEEEEcCcCCC
Q 014515 303 IKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL-RVGSVWINCFDVF 381 (423)
Q Consensus 303 ~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l-~~g~v~iN~~~~~ 381 (423)
+| .++-++|+|||++++|..-. -..-|.++|+. .+..++ ++|.|++..+...
T Consensus 292 --------------------~g---~ii~v~~~eeai~~~N~~AP-EHLel~~~~~~---~~l~~i~nAGaiFlG~~sp~ 344 (416)
T PRK13770 292 --------------------QH---YLIHASNFDEACHVMNTIAP-EHASIQTVNPQ---PYIEKVKYVGALFIGHYSPE 344 (416)
T ss_pred --------------------CC---EEEEECCHHHHHHHHHhhCh-HhheehhCCHH---HHHhhCCEeceeccCCCCch
Confidence 11 33567999999999998643 35668888885 566677 4899999865431
Q ss_pred --CCC--CCCCCCCCCCCCCcchHHHHHhhheeeEE
Q 014515 382 --DAA--IPFGGYKQSGQGREKGSYSLSNYLQVKAV 413 (423)
Q Consensus 382 --~~~--~pfgG~~~SG~g~~~g~~~l~~~~~~k~v 413 (423)
.++ .|-.=...+|..|+.+..++..|.+..++
T Consensus 345 a~GDY~aGpNHvLPT~G~AR~~sgLsv~~FlK~~s~ 380 (416)
T PRK13770 345 VIGDYVAGPSHVLPTNRTARFTNGLSVNDFLTRNTV 380 (416)
T ss_pred hhhccccCCCCcCCCCcceeccCCCcHHHeecceee
Confidence 111 11112345677788888888889887655
|
|
| >cd06572 Histidinol_dh Histidinol dehydrogenase, HisD, E | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.33 Score=48.00 Aligned_cols=267 Identities=17% Similarity=0.121 Sum_probs=143.9
Q ss_pred CCCceeEeeccceeEEEEccCc-hhHH-hHHHhhhhhhccCCeEEE--eCCCCchHHHHHHHHHHHHcCCCCCcEEEEeC
Q 014515 70 GPYHVQTLHEPIGVAGQIIPWN-FPLL-MFAWKVGPALACGNTIVL--KTAEQTPLSALYVSKLLHEAGLPPGVLNIVSG 145 (423)
Q Consensus 70 ~~~~~~~~~~P~Gvv~~i~p~n-~P~~-~~~~~l~~AL~aGN~vi~--kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~ 145 (423)
.|.....++.|+--|++..|.- +|+. +.+...+||-.+|+.=|+ .|+.........+.-..+.+|..+ +--+ |
T Consensus 82 ~G~~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~aa~~~Gv~e--iy~v-G 158 (390)
T cd06572 82 PGVVLGQRYRPIERVGLYVPGGTAPYPSTVLMLAIPAKVAGVKEIVVVTPPRKDGKINPAILAAAKLAGVDE--IYKV-G 158 (390)
T ss_pred CCcEEEEEEEehhEEEEEecCCCCcchHHHHHhhcchhhcCCCeEEEEeCcCCCCCCCHHHHHHHHHcCCcE--Eecc-C
Confidence 4667788899999999999963 3432 334557899999987654 454321112222233345555442 1112 2
Q ss_pred CchhHHHHhh----cccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccC
Q 014515 146 YGPTAGAALA----SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQG 221 (423)
Q Consensus 146 ~~~~~~~~l~----~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~G 221 (423)
|.....+|. .-|.||.|+=.|..-+..+=...... -..- ...+..--.+|-++++|.+..+..++.-+=+..
T Consensus 159 -GaQAIAAlAyGTesi~~VDkIvGPGN~yV~~AK~~v~g~-V~ID-~~AGPSEvlIiAD~~A~p~~vAaDLLaQAEH~~- 234 (390)
T cd06572 159 -GAQAIAALAYGTETIPKVDKIVGPGNIYVTAAKRLVSGD-VGID-MPAGPSEVLVIADETANPEFVAADLLSQAEHDP- 234 (390)
T ss_pred -CHHHHHHHHcCCcCCCCCCEeeCCchHHHHHHHHHhcCC-cCcc-CCCCCceEEEEeCCCCCHHHHHHHHHhhhccCC-
Confidence 333333333 25789999988876543321111111 0000 111122233444556899988777765443331
Q ss_pred CcccCCCeEEEeCc--cHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCC
Q 014515 222 QCCCAGSRTFVHES--VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAK 299 (423)
Q Consensus 222 q~C~a~~~v~V~~~--~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~ 299 (423)
..+.++|-.+ ..++..+.+.+++..+.- . + .++.+..
T Consensus 235 ----~a~aiLvT~s~~la~~V~~~v~~ql~~l~r---------------~---~----~~~~~~~--------------- 273 (390)
T cd06572 235 ----DSQAILVTTSEELAEAVEEEVERQLAELPR---------------R---E----IAAKSLL--------------- 273 (390)
T ss_pred ----CCeEEEEECCHHHHHHHHHHHHHHHHhCCc---------------H---H----HHHHHHH---------------
Confidence 2334555554 234444444433332210 0 0 1111111
Q ss_pred CceeecEEEecCCCcccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhc-ceeEEEEcCc
Q 014515 300 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL-RVGSVWINCF 378 (423)
Q Consensus 300 g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l-~~g~v~iN~~ 378 (423)
-+ -.++.++|++|+++++|..-. -..-|.++|+. .+..++ ++|.|++..+
T Consensus 274 ----------------------~~---g~ii~~~~~~eai~~~N~~AP-EHLel~~~~~~---~~l~~i~nAGsiFlG~~ 324 (390)
T cd06572 274 ----------------------DY---GAIILVDDLEEAIELANEYAP-EHLELQTEDPE---ELLEKIRNAGSIFLGPY 324 (390)
T ss_pred ----------------------hC---CEEEEECCHHHHHHHHHhhch-hhheeHhcCHH---HHHhhCccceEEeecCC
Confidence 01 134567999999999998643 35678888886 466666 5999999875
Q ss_pred CCCC--CC--CCCCCCCCCCCCCcchHHHHHhhheeeEE
Q 014515 379 DVFD--AA--IPFGGYKQSGQGREKGSYSLSNYLQVKAV 413 (423)
Q Consensus 379 ~~~~--~~--~pfgG~~~SG~g~~~g~~~l~~~~~~k~v 413 (423)
.... .+ .|-.=...+|..|+.+..+...|.+..++
T Consensus 325 tp~a~GDY~aGpNHvLPT~G~Ar~~sgL~v~~F~K~~s~ 363 (390)
T cd06572 325 TPEALGDYAAGPNHVLPTGGTARFYSGLSVDDFLKRITV 363 (390)
T ss_pred CchhhhccccCCCCccCCCcceeecCCCCHHHheeccee
Confidence 4311 11 11112334677787777888888887655
|
C 1.1.1.23. Histidinol dehydrogenase catalyzes the last two steps in the L-histidine biosynthesis pathway, which is conserved in bacteria, archaea, fungi, and plants. These last two steps are (i) the NAD-dependent oxidation of L-histidinol to L-histidinaldehyde, and (ii) the NAD-dependent oxidation of L-histidinaldehyde to L-histidine. In most fungi and in the unicellular choanoflagellate Monosiga bevicollis, the HisD domain is fused with units that catalyze the second and third biosynthesis steps in this same pathway. |
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0015 Score=73.92 Aligned_cols=104 Identities=13% Similarity=0.051 Sum_probs=78.2
Q ss_pred cCCCCCCCceeEeeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEe
Q 014515 65 TAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVS 144 (423)
Q Consensus 65 ~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~ 144 (423)
.+|+++|+++..+..|+|+|+|+++..- ..+.++..+|++||.+|+..++.. .. ++ +++|+.+.+.+.
T Consensus 1172 ~LPGPTGE~N~l~l~pRg~vLcl~~~~~---~~~~Ql~Aala~Gn~~v~~~~~~~---~~----~~--~~Lp~~v~~~v~ 1239 (1318)
T PRK11809 1172 LLPGPTGERNTYTLLPRERVLCLADTEQ---DALTQLAAVLAVGSQALWPDDALH---RA----LV--AALPAAVQARIQ 1239 (1318)
T ss_pred cCCCCCCCcceeeccCCCcEEEeCCCHH---HHHHHHHHHHHhCCEEEEeCCchh---HH----HH--HhccHHHHhHhh
Confidence 4778899999999999999999988433 578899999999999988654431 12 22 358888877653
Q ss_pred CCchhHHHHhhcccCcceEeeecCchHHHHHHHHHhhCCC
Q 014515 145 GYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 184 (423)
Q Consensus 145 ~~~~~~~~~l~~~~~v~~v~~tGs~~~~~~v~~~~a~~~~ 184 (423)
-. . ........++.|.|.|.....+.+.+..+++.+
T Consensus 1240 ~~---~-~~~~~~~~~~avl~~G~~~~l~~~~~~LA~R~G 1275 (1318)
T PRK11809 1240 LA---K-DWQLADQPFDAVLFHGDSDQLRALCEQVAQRDG 1275 (1318)
T ss_pred hc---c-ccccccCCccEEEEeCCHHHHHHHHHHHhcCCC
Confidence 21 1 122233569999999999999999999888553
|
|
| >PRK12447 histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.41 Score=47.71 Aligned_cols=266 Identities=17% Similarity=0.177 Sum_probs=146.0
Q ss_pred CCCceeEeeccceeEEEEccC-chhHH-hHHHhhhhhhccCCeEEE--eCCCCchHHHHHHHHHHHHcCCCCCcEEEEeC
Q 014515 70 GPYHVQTLHEPIGVAGQIIPW-NFPLL-MFAWKVGPALACGNTIVL--KTAEQTPLSALYVSKLLHEAGLPPGVLNIVSG 145 (423)
Q Consensus 70 ~~~~~~~~~~P~Gvv~~i~p~-n~P~~-~~~~~l~~AL~aGN~vi~--kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~ 145 (423)
.|.....++.|+--|++..|. .+|+. +.+...+||-.+|..=|+ .|+.........|+ ..+.+|+-+ |--+ |
T Consensus 105 ~Gv~~g~~~~Pl~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~~i~p~iL~-Aa~~~Gv~e--Iy~v-G 180 (426)
T PRK12447 105 PGVILGHRNIPVNSVGCYVPGGRYPLVASAHMSVLTAKVAGVKRVIACTPPFPGEPPPAIVA-AMHLAGADE--IYVL-G 180 (426)
T ss_pred CCeEEEEEEeehheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCCCCCCCCHHHHH-HHHHcCCCe--ehhc-C
Confidence 455667889999999999996 33332 334557899999987654 45432112222233 445555442 1111 2
Q ss_pred CchhHHHHhh----cccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccC
Q 014515 146 YGPTAGAALA----SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQG 221 (423)
Q Consensus 146 ~~~~~~~~l~----~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~G 221 (423)
|...-.+|. .-|+||.|+=.|+.-+..+=....+. -.+. ...+..--.+|-++++|.+..+..++.-+=+...
T Consensus 181 -GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g~-V~ID-~~AGPSEvlViAD~~Anp~~vAaDLLaQAEHd~~ 257 (426)
T PRK12447 181 -GVQAVAAMAYGTETIKPVDMLVGPGNAYVAEAKRQLFGR-VGID-LFAGPTETLVIADDTADPELVATDLLGQAEHGPN 257 (426)
T ss_pred -CHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcCc-cCcC-CCCCCceeEEEeCCCCCHHHHHHHHHHHhccCCC
Confidence 332233333 23689999988887543311111111 0011 1111222334445568999888777755444322
Q ss_pred CcccCCCeEEEeCc--cHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCC
Q 014515 222 QCCCAGSRTFVHES--VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAK 299 (423)
Q Consensus 222 q~C~a~~~v~V~~~--~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~ 299 (423)
.+.++|-.+ +.++..+++.+++..+. + .+.++.+.++
T Consensus 258 -----a~~iLvT~s~~la~~V~~~v~~ql~~l~----------------r------~~i~~~sl~~-------------- 296 (426)
T PRK12447 258 -----SPAVLITTSRKLAEEVLAEIERLLAILP----------------T------ADVASAAWRD-------------- 296 (426)
T ss_pred -----CceEEEECCHHHHHHHHHHHHHHHHhCC----------------H------HHHHHHHHHh--------------
Confidence 344566444 33444444444333221 0 0112222111
Q ss_pred CceeecEEEecCCCcccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhc-ceeEEEEcCc
Q 014515 300 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL-RVGSVWINCF 378 (423)
Q Consensus 300 g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l-~~g~v~iN~~ 378 (423)
+| .++-++|++||++++|..-. -...|.++|+. .+..++ ++|.|++..+
T Consensus 297 -----------------------~g---~ii~v~~l~ea~~~~N~~AP-EHLel~~~~~~---~~l~~i~nAGaiFlG~~ 346 (426)
T PRK12447 297 -----------------------YG---EVILCDDLEEMVAEADRYAS-EHVQVMTEDPD---WFLENMTNYGALFLGER 346 (426)
T ss_pred -----------------------CC---EEEEECCHHHHHHHHHhhCh-HheeehhCCHH---HHHhhcCccceeccCCC
Confidence 11 23467999999999998643 35668888884 666677 5999999765
Q ss_pred CC--CCCC--CCCCCCCCCCCCCcchHHHHHhhheeeEE
Q 014515 379 DV--FDAA--IPFGGYKQSGQGREKGSYSLSNYLQVKAV 413 (423)
Q Consensus 379 ~~--~~~~--~pfgG~~~SG~g~~~g~~~l~~~~~~k~v 413 (423)
.. ..++ .|-.=...+|..|+.+..+.+.|.+.-++
T Consensus 347 sp~a~GDY~aGpNHvLPT~G~Ar~~sgLsv~~FlK~~s~ 385 (426)
T PRK12447 347 TNVAYGDKVIGTNHVLPTSGAARYTGGLWVGKFLKTVTY 385 (426)
T ss_pred CchhhhhcccCCCcccCCCcceeecCCCcHHHhccceeE
Confidence 33 1111 11112445778888888889999886654
|
|
| >PRK13769 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.48 Score=46.36 Aligned_cols=315 Identities=14% Similarity=0.095 Sum_probs=164.4
Q ss_pred HHHHHHHHHHHHHcHHHHHHHHHHHcCCCh-h-------hhhhchHHHHH----HHHHHHHHHhhhhcCccCCCCCCCce
Q 014515 7 SKIILRFADLLERHNDEIAALETWDNGKPF-E-------QSAQTEVPMTT----RLFRYYAGWADKIQGLTAPADGPYHV 74 (423)
Q Consensus 7 ~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~-~-------~~~~~ev~~~~----~~l~~~~~~~~~~~~~~~~~~~~~~~ 74 (423)
.+..+.+.+.++++.|+-....++...+-. . +....++..++ +.++.|.....+... .. ...|...
T Consensus 10 ~~~V~~Ii~~Vr~~GD~Al~~yt~~FD~~~~~~~~V~~~~~~~~~~~~ai~~a~~~I~~fh~~q~~~~~-~~-~~~Gv~~ 87 (368)
T PRK13769 10 VKSVEKIVDDVAERGLQAALEYSERLDGVAPEAALVEPRPGGDPAVVAAALEAAKSLEALYSRLKPPEA-VD-FYGGVLR 87 (368)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHhcCCCccceeECchhhCCHHHHHHHHHHHHHHHHHHHHhCCCCe-Ee-cCCCeEE
Confidence 355666777777777776665665544321 0 00111333333 334433322111111 11 1245566
Q ss_pred eEeeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHh
Q 014515 75 QTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAAL 154 (423)
Q Consensus 75 ~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l 154 (423)
..++.|+--|++..|.-+|- +.+...+||-.+|..=|+--+|-.......|+ ..+.+|..+ |--+ |.-..+ .++
T Consensus 88 g~~~~Pi~rvG~YVPa~~pS-tvLM~~iPAkvAGV~~Iv~~TPp~~i~p~vL~-aa~~~Gv~e--Iy~v-GGAQAI-Aa~ 161 (368)
T PRK13769 88 SVFWKPVRRAALYVPARYVS-TLVMLAVPARAAGVEEIYVVTPPRGVTGELLA-VAKELGVKG--VLAI-GGPHGL-AYA 161 (368)
T ss_pred EEEEeeeeeeEEEeccchHH-HHHHhhccHhhcCCCeEEEeCCCCCCCHHHHH-HHHHcCCCe--eecc-cCHHHH-HHH
Confidence 78899999999999965554 44555789999998766533321112222233 445565542 2222 322333 355
Q ss_pred hcccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeC
Q 014515 155 ASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHE 234 (423)
Q Consensus 155 ~~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~ 234 (423)
...-+||.|+=.|+.-+..+=....+. .-+=+--|---.+|+.+++|.+..+..++.-+=+.. ..+.++|-.
T Consensus 162 a~gt~VDkIvGPGN~yV~~AK~~v~g~---V~ID~~AGPSEvlViAD~a~p~~vAaDLLaQAEH~~-----~a~~iLvT~ 233 (368)
T PRK13769 162 VFHMGVDMVAGPGGLYVQAAKYVLSQY---VGIDGIEGPTELVVYAEGVPPEVAVRGALAQLEHGP-----TSFAYLLST 233 (368)
T ss_pred hcCCCcCEEECCCcHHHHHHHHHHhCC---cCCCCcCCCcceEEEcCCCCHHHHHHHHHHHhhcCC-----CCcEEEEEC
Confidence 554589999888876543311111111 111111233344555556887777766654433322 234455555
Q ss_pred ccHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCc
Q 014515 235 SVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDD 314 (423)
Q Consensus 235 ~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~ 314 (423)
+ +++.+++.+++++. +.++
T Consensus 234 s--~~la~~V~~~v~~~---------------------------~~~~-------------------------------- 252 (368)
T PRK13769 234 D--AELLKAAEEIYRRE---------------------------RTSS-------------------------------- 252 (368)
T ss_pred C--HHHHHHHHHHHHHH---------------------------HHhc--------------------------------
Confidence 4 45555555544320 0000
Q ss_pred ccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhc-ceeEEEEcCcCCCCCC--CCCCCCC
Q 014515 315 MLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL-RVGSVWINCFDVFDAA--IPFGGYK 391 (423)
Q Consensus 315 ~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l-~~g~v~iN~~~~~~~~--~pfgG~~ 391 (423)
.|- ..++.++|++|+++++|..-.- ...|.+.+ .+..++ ++|.|+++.+....++ .|-.=..
T Consensus 253 --------~~~-~~iivv~~leeai~~~N~~APE-HLel~~~~-----~~~~~i~nAGsiFl~~p~a~GDY~aGpNHvLP 317 (368)
T PRK13769 253 --------MGP-LEVRKVAGVEEAVRFIDEIAPE-HLEVWGRR-----EVAYRVRNVGAVSVNMPSPYLDYVAGISHVLP 317 (368)
T ss_pred --------CCC-CeEEEECCHHHHHHHHHhhChH-heEeeCcH-----HHHhhCCccCChhcCCchhhhccccCCCCcCC
Confidence 000 2456789999999999986432 34445522 245566 5999999653222211 1111133
Q ss_pred CCCCCCcchHHHHHhhheeeEE
Q 014515 392 QSGQGREKGSYSLSNYLQVKAV 413 (423)
Q Consensus 392 ~SG~g~~~g~~~l~~~~~~k~v 413 (423)
.+|..|+.|..+...|.+..++
T Consensus 318 T~G~AR~~sgLsv~~FlK~~t~ 339 (368)
T PRK13769 318 TGGTARWRGIITPLTFMKPIGV 339 (368)
T ss_pred CCcceeccCCCcHHHcccceeE
Confidence 5677788888888888886554
|
|
| >COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=92.78 E-value=0.9 Score=46.35 Aligned_cols=109 Identities=17% Similarity=0.193 Sum_probs=74.7
Q ss_pred CCCCCCCceeEeeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeC
Q 014515 66 APADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSG 145 (423)
Q Consensus 66 ~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~ 145 (423)
++.+.+++++....|.|-|+++.+ +....+.+++.+++.||.+++-+.... ..++.. +|..+-..+.-
T Consensus 629 LpGptGErN~~~l~pr~rvl~~~~---~~~~~~~ql~a~la~G~~~v~~~~~~~-------aa~~~~--l~~~v~~~~~~ 696 (769)
T COG4230 629 LPGPTGERNTYTLHPRGRVLCVAG---DEQDLLTQLAAVLAVGNQVVIPEDSGL-------AALLKD--LPSAVASRIQV 696 (769)
T ss_pred cCCCcccceeecccCCccEEEeCC---CHHHHHHHHHHHHhcCCeEEecCcchH-------HHHHHh--chhhhhhheee
Confidence 567788999999999999999866 566778889999999999999665422 222222 55543222211
Q ss_pred CchhHHHHhhcccCcceEeeecCchHHHHHHHHHhhCCCCceEEecC
Q 014515 146 YGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELG 192 (423)
Q Consensus 146 ~~~~~~~~l~~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~g 192 (423)
.++ + ...-.++.+.|.|..+..+.+.+..+.+ ..|++.-.+
T Consensus 697 ~~~----~-~~~~~~~~vl~~gd~~~~r~~~~~iA~~-~Gpiv~~~~ 737 (769)
T COG4230 697 AKD----W-TADIPFDAVLFHGDSDRLRALCEAIAAR-DGPIVSVQG 737 (769)
T ss_pred ccc----h-hhccceeeEEecCCHHHHHHHHHHHhcC-CCCeEEeec
Confidence 122 2 2334689999999999999999977763 345544443
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 423 | ||||
| 1o05_A | 500 | Apo Form Of Human Mitochondrial Aldehyde Dehydrogen | 1e-149 | ||
| 1cw3_A | 494 | Human Mitochondrial Aldehyde Dehydrogenase Complexe | 1e-149 | ||
| 3n81_A | 500 | T244a Mutant Of Human Mitochondrial Aldehyde Dehydr | 1e-149 | ||
| 1ag8_A | 499 | Aldehyde Dehydrogenase From Bovine Mitochondria Len | 1e-149 | ||
| 2onn_A | 500 | Arg475gln Mutant Of Human Mitochondrial Aldehyde De | 1e-149 | ||
| 1nzw_A | 500 | Cys302ser Mutant Of Human Mitochondrial Aldehyde De | 1e-148 | ||
| 3n80_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase, Apo For | 1e-148 | ||
| 1zum_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 1e-148 | ||
| 1bi9_A | 499 | Retinal Dehydrogenase Type Two With Nad Bound Lengt | 1e-147 | ||
| 4fr8_A | 500 | Crystal Structure Of Human Aldehyde Dehydrogenase-2 | 1e-147 | ||
| 3inl_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 1e-147 | ||
| 1bxs_A | 501 | Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad | 1e-143 | ||
| 1o9j_A | 501 | The X-Ray Crystal Structure Of Eta-Crystallin Lengt | 1e-134 | ||
| 2o2p_A | 517 | Crystal Structure Of The C-Terminal Domain Of Rat 1 | 1e-104 | ||
| 3rhm_A | 517 | Crystal Structure Of The E673q Mutant Of C-Terminal | 1e-103 | ||
| 3rhj_A | 517 | Crystal Structure Of The E673a Mutant Of The C-Term | 1e-103 | ||
| 3rhr_A | 517 | Crystal Structure Of The C707a Mutant Of The C-Term | 1e-103 | ||
| 4gnz_A | 517 | Crystal Structure Of The C707s Mutant Of C-terminal | 1e-103 | ||
| 3rhl_A | 517 | Crystal Structure Of The E673aC707A DOUBLE MUTANT O | 1e-102 | ||
| 2wme_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 1e-100 | ||
| 2wox_A | 489 | Betaine Aldehyde Dehydrogenase From Pseudomonas Aer | 1e-100 | ||
| 2xdr_A | 489 | Crystallographic Structure Of Betaine Aldehyde Dehy | 2e-99 | ||
| 3zqa_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 4e-99 | ||
| 2wme_C | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 6e-99 | ||
| 4a0m_A | 496 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 6e-95 | ||
| 3iwj_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 2 | 4e-87 | ||
| 1a4s_A | 503 | Betaine Aldehyde Dehydrogenase From Cod Liver Lengt | 1e-86 | ||
| 2d4e_A | 515 | Crystal Structure Of The Hpcc From Thermus Thermoph | 2e-86 | ||
| 4i8p_A | 520 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1a | 4e-86 | ||
| 3r31_A | 517 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 8e-86 | ||
| 3iwk_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1 | 1e-85 | ||
| 3u4j_A | 528 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 9e-82 | ||
| 3ed6_A | 520 | 1.7 Angstrom Resolution Crystal Structure Of Betain | 1e-79 | ||
| 3ifg_A | 484 | Crystal Structure Of Succinate-Semialdehyde Dehydro | 2e-79 | ||
| 3jz4_A | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 3e-79 | ||
| 3jz4_C | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 4e-79 | ||
| 4i9b_A | 517 | Structure Of Aminoaldehyde Dehydrogenase 1 From Sol | 4e-77 | ||
| 4i8q_A | 514 | Structure Of The Aminoaldehyde Dehydrogenase 1 E260 | 2e-76 | ||
| 3ek1_A | 504 | Crystal Structure Of Aldehyde Dehydrogenase From Br | 4e-75 | ||
| 1wnb_A | 495 | Escherichia Coli Ydcw Gene Product Is A Medium-Chai | 6e-73 | ||
| 4dal_A | 498 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 7e-72 | ||
| 3ty7_A | 478 | Crystal Structure Of Aldehyde Dehydrogenase Family | 5e-71 | ||
| 2opx_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 9e-70 | ||
| 2hg2_A | 479 | Structure Of Lactaldehyde Dehydrogenase Length = 47 | 2e-69 | ||
| 2imp_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 2e-69 | ||
| 2w8n_A | 487 | The Crytal Structure Of The Oxidized Form Of Human | 1e-67 | ||
| 3k2w_A | 497 | Crystal Structure Of Betaine-Aldehyde Dehydrogenase | 1e-67 | ||
| 3b4w_A | 495 | Crystal Structure Of Mycobacterium Tuberculosis Ald | 2e-67 | ||
| 2w8p_A | 487 | The Crystal Structure Of Human C340a Ssadh Length = | 1e-66 | ||
| 3i44_A | 497 | Crystal Structure Of Aldehyde Dehydrogenase From Ba | 7e-66 | ||
| 3qan_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 1e-62 | ||
| 3rjl_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 2e-60 | ||
| 3r64_A | 508 | Crystal Structure Of A Nad-Dependent Benzaldehyde D | 8e-59 | ||
| 3pqa_A | 486 | Crystal Structure Of Glyceraldehyde-3-Phosphate Deh | 8e-58 | ||
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate Dehydrogenase Length = 51 | 5e-57 | ||
| 2bhp_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 8e-57 | ||
| 2bja_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 1e-55 | ||
| 1euh_A | 475 | Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase | 1e-53 | ||
| 3prl_A | 505 | Crystal Structure Of Nadp-Dependent Glyceraldehyde- | 3e-53 | ||
| 2id2_A | 475 | Gapn T244s Mutant X-Ray Structure At 2.5 A Length = | 4e-53 | ||
| 2esd_A | 475 | Crystal Structure Of Thioacylenzyme Intermediate Of | 9e-53 | ||
| 3rh9_A | 506 | The Crystal Structure Of Oxidoreductase From Marino | 1e-52 | ||
| 1qi1_A | 475 | Ternary Complex Of An Nadp Dependent Aldehyde Dehyd | 2e-52 | ||
| 1t90_A | 486 | Crystal Structure Of Methylmalonate Semialdehyde De | 6e-51 | ||
| 4dng_A | 485 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 6e-51 | ||
| 3ros_A | 484 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 4e-50 | ||
| 1ky8_A | 501 | Crystal Structure Of The Non-Phosphorylating Glycer | 6e-50 | ||
| 1uxv_A | 501 | Structural Basis For Allosteric Regulation And Subs | 3e-49 | ||
| 1uxn_A | 501 | Structural Basis For Allosteric Regulation And Subs | 6e-49 | ||
| 2jg7_A | 510 | Crystal Structure Of Seabream Antiquitin And Elucid | 4e-48 | ||
| 4f9i_A | 1026 | Crystal Structure Of Proline Utilization A (Puta) F | 7e-48 | ||
| 3efv_A | 462 | Crystal Structure Of A Putative Succinate-Semialdeh | 4e-46 | ||
| 2j6l_A | 500 | Structure Of Aminoadipate-Semialdehyde Dehydrogenas | 1e-42 | ||
| 3haz_A | 1001 | Crystal Structure Of Bifunctional Proline Utilizati | 5e-41 | ||
| 4e4g_A | 521 | Crystal Structure Of Putative Methylmalonate-Semial | 6e-40 | ||
| 3ju8_A | 490 | Crystal Structure Of Succinylglutamic Semialdehyde | 2e-37 | ||
| 4h7n_A | 474 | The Structure Of Putative Aldehyde Dehydrogenase Pu | 7e-37 | ||
| 3sza_A | 469 | Crystal Structure Of Human Aldh3a1 - Apo Form Lengt | 1e-34 | ||
| 1ad3_A | 452 | Class 3 Aldehyde Dehydrogenase Complex With Nicotin | 3e-34 | ||
| 3lv1_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 6e-34 | ||
| 3lns_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 1e-32 | ||
| 3v9g_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 3e-30 | ||
| 3v9h_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 7e-30 | ||
| 3v9j_A | 563 | Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylat | 8e-30 | ||
| 3v9i_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 2e-29 | ||
| 2vro_A | 532 | Crystal Structure Of Aldehyde Dehydrogenase From Bu | 8e-15 | ||
| 2y51_A | 534 | Crystal Structure Of E167a Mutant Of The Box Pathwa | 8e-15 | ||
| 2y53_A | 534 | Crystal Structure Of E257q Mutant Of The Box Pathwa | 9e-15 | ||
| 2y52_A | 534 | Crystal Structure Of E496a Mutant Of The Box Pathwa | 1e-14 | ||
| 2y5d_A | 534 | Crystal Structure Of C296a Mutant Of The Box Pathwa | 1e-13 | ||
| 3v4c_A | 528 | Crystal Structure Of A Semialdehyde Dehydrogenase F | 6e-11 | ||
| 1eyy_A | 510 | Crystal Structure Of The Nadp+ Dependent Aldehyde D | 1e-07 | ||
| 3my7_A | 452 | The Crystal Structure Of The Acdh Domain Of An Alco | 2e-05 |
| >pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nad+ And Mn2+ Length = 494 | Back alignment and structure |
|
| >pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Length = 499 | Back alignment and structure |
|
| >pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nadh And Mg2+ Length = 500 | Back alignment and structure |
|
| >pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound Length = 499 | Back alignment and structure |
|
| >pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In Complex With Nitroglycerin Length = 500 | Back alignment and structure |
|
| >pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Complexed With Agonist Alda-1 Length = 500 | Back alignment and structure |
|
| >pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound Length = 501 | Back alignment and structure |
|
| >pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin Length = 501 | Back alignment and structure |
|
| >pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadph Length = 517 | Back alignment and structure |
|
| >pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa With Nad(P)h-Catalytic Thiol Adduct. Length = 489 | Back alignment and structure |
|
| >pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa Length = 489 | Back alignment and structure |
|
| >pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa In Complex With Nadph Length = 490 | Back alignment and structure |
|
| >pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Spinach In Complex With Nad Length = 496 | Back alignment and structure |
|
| >pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From Pisum Sativum (Psamadh2) Length = 503 | Back alignment and structure |
|
| >pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver Length = 503 | Back alignment and structure |
|
| >pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus Hb8 Length = 515 | Back alignment and structure |
|
| >pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From Zea Mays (zmamadh1a) Length = 520 | Back alignment and structure |
|
| >pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Agrobacterium Tumefaciens Length = 517 | Back alignment and structure |
|
| >pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From Pisum Sativum (Psamadh1) Length = 503 | Back alignment and structure |
|
| >pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti Length = 528 | Back alignment and structure |
|
| >pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus Length = 520 | Back alignment and structure |
|
| >pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase From Burkholderia Pseudomallei, Part 1 Of 2 Length = 484 | Back alignment and structure |
|
| >pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum Lycopersium (slamadh1) With A Thiohemiacetal Intermediate Length = 517 | Back alignment and structure |
|
| >pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a Mutant From Solanum Lycopersicum (slamadh1-e260a) Length = 514 | Back alignment and structure |
|
| >pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella Melitensis Biovar Abortus 2308 Length = 504 | Back alignment and structure |
|
| >pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain Aldehyde Dehydrogenase (Complexed With Nadh And Betaine Aldehyde) Length = 495 | Back alignment and structure |
|
| >pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 498 | Back alignment and structure |
|
| >pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein From Staphylococcus Aureus Length = 478 | Back alignment and structure |
|
| >pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From Escherichia Coli Length = 479 | Back alignment and structure |
|
| >pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase Length = 479 | Back alignment and structure |
|
| >pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E. Coli: The Ternary Complex With Product Bound (L)-Lactate And Nadh. Length = 479 | Back alignment and structure |
|
| >pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From Pseudoalteromonas Atlantica T6c Length = 497 | Back alignment and structure |
|
| >pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde Dehydrogenase Complexed With Nad+ Length = 495 | Back alignment and structure |
|
| >pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Bartonella Henselae At 2.0a Resolution Length = 497 | Back alignment and structure |
|
| >pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Halodurans Length = 538 | Back alignment and structure |
|
| >pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Licheniformis (Target Nysgrc-000337) Length = 538 | Back alignment and structure |
|
| >pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde Dehydrogenase From Corynebacterium Glutamicum Length = 508 | Back alignment and structure |
|
| >pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase Gapn From Methanocaldococcus Jannaschii Dsm 2661 Length = 486 | Back alignment and structure |
|
| >pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase Length = 516 | Back alignment and structure |
|
| >pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nad. Length = 516 | Back alignment and structure |
|
| >pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nadh Length = 516 | Back alignment and structure |
|
| >pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From Streptococcus Mutans Length = 475 | Back alignment and structure |
|
| >pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus Halodurans C-125 Length = 505 | Back alignment and structure |
|
| >pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A Length = 475 | Back alignment and structure |
|
| >pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter Aquaeolei Length = 506 | Back alignment and structure |
|
| >pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde Dehydrogenase From Bacillus Subtilis Length = 486 | Back alignment and structure |
|
| >pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Bacillus Subtilis Subsp. Subtilis Str. 168 Length = 485 | Back alignment and structure |
|
| >pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Lactobacillus Acidophilus Length = 484 | Back alignment and structure |
|
| >pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating Glyceraldehyde-3- Phosphate Dehydrogenase Length = 501 | Back alignment and structure |
|
| >pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation Of Its Substrate Specificity Length = 510 | Back alignment and structure |
|
| >pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From Geobacter Sulfurreducens Pca Length = 1026 | Back alignment and structure |
|
| >pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde Dehydrogenase From Salmonella Typhimurium Lt2 With Bound Nad Length = 462 | Back alignment and structure |
|
| >pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A (Puta) Protein Length = 1001 | Back alignment and structure |
|
| >pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 521 | Back alignment and structure |
|
| >pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde Dehydrogenase From Pseudomonas Aeruginosa. Length = 490 | Back alignment and structure |
|
| >pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From Anabaena Variabilis. Length = 474 | Back alignment and structure |
|
| >pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form Length = 469 | Back alignment and structure |
|
| >pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide- Adenine-Dinucleotide Length = 452 | Back alignment and structure |
|
| >pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ Length = 457 | Back alignment and structure |
|
| >pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ And Benzoate Adduct Length = 457 | Back alignment and structure |
|
| >pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Length = 566 | Back alignment and structure |
|
| >pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352a Length = 566 | Back alignment and structure |
|
| >pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate Dehydrogenase Complexed With Sulfate Ion Length = 563 | Back alignment and structure |
|
| >pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352l Length = 566 | Back alignment and structure |
|
| >pdb|2VRO|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Burkholderia Xenovorans Lb400 Length = 532 | Back alignment and structure |
|
| >pdb|2Y51|A Chain A, Crystal Structure Of E167a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2Y53|A Chain A, Crystal Structure Of E257q Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2Y52|A Chain A, Crystal Structure Of E496a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2Y5D|A Chain A, Crystal Structure Of C296a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|3V4C|A Chain A, Crystal Structure Of A Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 528 | Back alignment and structure |
|
| >pdb|1EYY|A Chain A, Crystal Structure Of The Nadp+ Dependent Aldehyde Dehydrogenase From Vibrio Harveyi. Length = 510 | Back alignment and structure |
|
| >pdb|3MY7|A Chain A, The Crystal Structure Of The Acdh Domain Of An Alcohol Dehyd From Vibrio Parahaemolyticus To 2.25a Length = 452 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 423 | |||
| 1bxs_A | 501 | Aldehyde dehydrogenase; retinal, class 1, tetramer | 0.0 | |
| 1o04_A | 500 | Aldehyde dehydrogenase, mitochondrial precursor; A | 0.0 | |
| 2ve5_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 0.0 | |
| 2o2p_A | 517 | Formyltetrahydrofolate dehydrogenase; aldehyde deh | 0.0 | |
| 3u4j_A | 528 | NAD-dependent aldehyde dehydrogenase; PSI-biology, | 0.0 | |
| 3iwj_A | 503 | Putative aminoaldehyde dehydrogenase; rossmann fol | 0.0 | |
| 3ed6_A | 520 | Betaine aldehyde dehydrogenase; structural genomic | 0.0 | |
| 1a4s_A | 503 | ALDH, betaine aldehyde dehydrogenase; oxidoreducta | 0.0 | |
| 2d4e_A | 515 | 5-carboxymethyl-2-hydroxymuconate semialdehyde deh | 0.0 | |
| 3r31_A | 517 | BADH, betaine aldehyde dehydrogenase; structural g | 0.0 | |
| 1wnd_A | 495 | Putative betaine aldehyde dehydrogenase; NADH, flu | 0.0 | |
| 4f3x_A | 498 | Putative aldehyde dehydrogenase; structural genomi | 0.0 | |
| 3b4w_A | 495 | Aldehyde dehydrogenase; RV0223C-NAD complex, struc | 0.0 | |
| 3qan_A | 538 | 1-pyrroline-5-carboxylate dehydrogenase 1; proline | 0.0 | |
| 3i44_A | 497 | Aldehyde dehydrogenase; oxidoreductase, structural | 0.0 | |
| 3ty7_A | 478 | Putative aldehyde dehydrogenase SAV2122; structura | 0.0 | |
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate dehydrogenase; oxidoredu | 0.0 | |
| 3r64_A | 508 | NAD dependent benzaldehyde dehydrogenase; structur | 0.0 | |
| 1uxt_A | 501 | Glyceraldehyde-3-phosphate dehydrogenase (NADP+); | 0.0 | |
| 3prl_A | 505 | NADP-dependent glyceraldehyde-3-phosphate dehydro; | 0.0 | |
| 3pqa_A | 486 | Lactaldehyde dehydrogenase; structural genomics, p | 0.0 | |
| 3ju8_A | 490 | Succinylglutamic semialdehyde dehydrogenase; alpha | 0.0 | |
| 2y53_A | 534 | Aldehyde dehydrogenase (BOX pathway); oxidoreducta | 0.0 | |
| 2imp_A | 479 | Lactaldehyde dehydrogenase; protein-lactate-NADH t | 1e-172 | |
| 1euh_A | 475 | NADP dependent non phosphorylating glyceraldehyde- | 1e-171 | |
| 4f9i_A | 1026 | Proline dehydrogenase/delta-1-pyrroline-5-carboxy | 1e-163 | |
| 4dng_A | 485 | Uncharacterized aldehyde dehydrogenase ALDY; struc | 1e-159 | |
| 2j6l_A | 500 | Aldehyde dehydrogenase family 7 member A1; NAD, re | 1e-157 | |
| 3k2w_A | 497 | Betaine-aldehyde dehydrogenase; structural genomic | 1e-151 | |
| 3jz4_A | 481 | Succinate-semialdehyde dehydrogenase [NADP+]; tetr | 1e-150 | |
| 3ifg_A | 484 | Succinate-semialdehyde dehydrogenase (NADP+); niai | 1e-150 | |
| 3ek1_A | 504 | Aldehyde dehydrogenase; ssgcid, oxidoreductase, st | 1e-149 | |
| 3rh9_A | 506 | Succinate-semialdehyde dehydrogenase (NAD(P)(+)); | 1e-148 | |
| 2w8n_A | 487 | Succinate-semialdehyde dehydrogenase, mitochondria | 1e-146 | |
| 3ros_A | 484 | NAD-dependent aldehyde dehydrogenase; nysgrc, PSI- | 1e-144 | |
| 3etf_A | 462 | Putative succinate-semialdehyde dehydrogenase; cen | 1e-143 | |
| 1ez0_A | 510 | ALDH, aldehyde dehydrogenase; nucleotide binding d | 1e-137 | |
| 3my7_A | 452 | Alcohol dehydrogenase/acetaldehyde dehydrogenase; | 1e-120 | |
| 3haz_A | 1001 | Proline dehydrogenase; proline utilization A, PUTA | 1e-118 | |
| 3v4c_A | 528 | Aldehyde dehydrogenase (NADP+); structural genomic | 1e-115 | |
| 3k9d_A | 464 | LMO1179 protein, aldehyde dehydrogenase; structura | 4e-95 | |
| 1t90_A | 486 | MMSDH, probable methylmalonate-semialdehyde dehydr | 6e-91 | |
| 4e3x_A | 563 | Delta-1-pyrroline-5-carboxylate dehydrogenase, mit | 2e-90 | |
| 4e4g_A | 521 | Methylmalonate-semialdehyde dehydrogenase; structu | 3e-87 | |
| 3sza_A | 469 | Aldehyde dehydrogenase, dimeric NADP-preferring; A | 1e-79 | |
| 3lns_A | 457 | Benzaldehyde dehydrogenase; oxidoreductase, NADP+, | 2e-69 |
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* Length = 501 | Back alignment and structure |
|---|
Score = 780 bits (2018), Expect = 0.0
Identities = 240/421 (57%), Positives = 306/421 (72%), Gaps = 2/421 (0%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
M A ER +++ + ADL+ER +A +E + GK F + ++ + RY AGWADK
Sbjct: 80 MDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADK 139
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
IQG T P DG + T EP+GV GQIIPWNFPLLMF WK+GPAL+CGNT+V+K AEQTP
Sbjct: 140 IQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTP 199
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
L+AL++ L+ EAG PPGV+NIV GYGPTAGAA++SHM+VDK+AFTGST GK++ + A
Sbjct: 200 LTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAG 259
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
KSNLK V+LELGGKSP IV DAD+D A E AH +F++QGQCC A SR FV ES+YD+F
Sbjct: 260 KSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEF 319
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 300
V ++ A K V+G+P G+ QGPQID EQ+EKIL I SG GAKLE GG G KG
Sbjct: 320 VRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKG 379
Query: 301 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 360
Y+I+PTVF+ V DDM IAK+EIFGPVQ I+K+K LD+VI+R+N + YGL+AG+FT+++D
Sbjct: 380 YFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDK 439
Query: 361 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL--K 418
A T+ AL+ G+VW+NC+ V A PFGG+K SG GRE G Y Y +VK V + K
Sbjct: 440 AITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIKISQK 499
Query: 419 N 419
N
Sbjct: 500 N 500
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... Length = 500 | Back alignment and structure |
|---|
Score = 780 bits (2017), Expect = 0.0
Identities = 253/421 (60%), Positives = 308/421 (73%), Gaps = 2/421 (0%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
M A R +++ R ADL+ER +AALET DNGKP+ S ++ M + RYYAGWADK
Sbjct: 79 MDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADK 138
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
G T P DG + T HEP+GV GQIIPWNFPLLM AWK+GPALA GN +V+K AEQTP
Sbjct: 139 YHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTP 198
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
L+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH +VDK+AFTGST G+++ A
Sbjct: 199 LTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAG 258
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
SNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQC CAGSRTFV E +YD+F
Sbjct: 259 SSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEF 318
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 300
VE++ A A RVVG+PF +QGPQ+D QF+KIL YI +G GAKL GG +G
Sbjct: 319 VERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRG 378
Query: 301 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 360
Y+I+PTVF V+D M IAK+EIFGPV ILK+K ++EV+ R+N S YGLAA VFT +LD
Sbjct: 379 YFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDK 438
Query: 361 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL--K 418
AN L +AL+ G+VW+NC+DVF A PFGGYK SG GRE G Y L Y +VK V + K
Sbjct: 439 ANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVKVPQK 498
Query: 419 N 419
N
Sbjct: 499 N 499
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* Length = 517 | Back alignment and structure |
|---|
Score = 765 bits (1979), Expect = 0.0
Identities = 179/419 (42%), Positives = 273/419 (65%), Gaps = 6/419 (1%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
+ A +R +++ R AD++E+H +E+A +E D G + + +T V M+ + FRY+AGW DK
Sbjct: 95 INARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDK 154
Query: 61 IQGLTAPADGP----YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 116
IQG T P + T EP+GV G +IPWN+PL+M +WK LA GNT+V+K A
Sbjct: 155 IQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPA 214
Query: 117 EQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 176
+ TPL+AL ++L +AG+P GV+NI+ G G G L+ H +V K+ FTGST GK ++
Sbjct: 215 QVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIM 274
Query: 177 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 236
+ A SN+K V+LELGGKSP I+ D D++KA ++ ++FFN+G+ C A R FV ES+
Sbjct: 275 KSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESI 334
Query: 237 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 296
++QFV+K K +G+P + GPQ K+++Y + GV GA L GG ++
Sbjct: 335 HNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQV 394
Query: 297 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK--DLDEVIQRSNASQYGLAAGVF 354
G++ +PTVFT V+D M IAK+E FGP+ I ++ D+D V+ R+NA+++GLA+GVF
Sbjct: 395 PRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVF 454
Query: 355 THNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 413
T +++ A + L+ G+V+IN ++ D A PFGG+KQSG G++ G +L+ YL++K V
Sbjct: 455 TRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTV 513
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 753 bits (1946), Expect = 0.0
Identities = 178/426 (41%), Positives = 250/426 (58%), Gaps = 5/426 (1%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
M+ ERS+++ + ADL+ +E+A +E+ + GKP Q A+ E+ L+ Y AG A
Sbjct: 82 MSGAERSRLMFKVADLILARQEELALIESLEVGKPIAQ-ARGEIGFCADLWSYAAGQARA 140
Query: 61 IQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 119
++G T G L EP+GV G I PWNFP ++ + +V A+ G T+VLK +E T
Sbjct: 141 LEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFT 200
Query: 120 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 179
+++ +++L EAG+P GV N+V+GYG AG LA VD +AFTGS G + ++A
Sbjct: 201 SGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIA 260
Query: 180 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239
A+ +K V LELGGK P IV DAD+D AA+ Y ++ N GQCC +GSR V E + D
Sbjct: 261 AR-TVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDA 319
Query: 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA- 298
+E+ ++ K GDP + G I EK+ Y+ +G+ GA+L GGER+G
Sbjct: 320 LMERLLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGRE 379
Query: 299 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNL 358
G Y PTVF GV DM IA++EIFGPV S L +K DE + +NA+++GL+A V++ NL
Sbjct: 380 AGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNL 439
Query: 359 DTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 418
+TA +R +R G WIN +P GGYK+SG GRE G Y Y Q K V L
Sbjct: 440 ETALQTIRRIRAGRCWINSVIDGTPELPIGGYKKSGLGRELGRYGFDEYSQFKGVHVTLG 499
Query: 419 NPA-WL 423
PA W
Sbjct: 500 RPAPWF 505
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} PDB: 3iwk_A* 4a0m_A* Length = 503 | Back alignment and structure |
|---|
Score = 749 bits (1937), Expect = 0.0
Identities = 171/428 (39%), Positives = 247/428 (57%), Gaps = 8/428 (1%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
+ R++ + A + E+A LE+ D GKP ++ A ++ F YYA A+K
Sbjct: 69 ASGAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDE-AAWDIDDVAGCFEYYADLAEK 127
Query: 61 IQGLTAPA----DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 116
+ + L EPIGV G I PWN+P+LM WKV PALA G +LK +
Sbjct: 128 LDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKPS 187
Query: 117 EQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 176
E L+ L + ++ E GLPPGVLNI++G GP AGA LA+H +VDK+AFTGS+ TG ++
Sbjct: 188 ELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKIM 247
Query: 177 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 236
AA+ +KPV+LELGGKSP +V ED D+DKAAE A + F+ GQ C A SR +HES+
Sbjct: 248 TAAAQ-LVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESI 306
Query: 237 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 296
+F+ + + DP + G + GP + Q+EKILK++ + GA + TGG R
Sbjct: 307 ATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRP 366
Query: 297 G--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVF 354
KG++I+PT+ T V +M I ++E+FGPV + + +E I +N + YGL A V
Sbjct: 367 EHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVI 426
Query: 355 THNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 414
+++L+ + +A + G VW+NC P+GG K+SG GRE G + L NYL VK V
Sbjct: 427 SNDLERCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVT 486
Query: 415 TALKNPAW 422
+ W
Sbjct: 487 QYISEEPW 494
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* Length = 520 | Back alignment and structure |
|---|
Score = 748 bits (1933), Expect = 0.0
Identities = 161/427 (37%), Positives = 238/427 (55%), Gaps = 7/427 (1%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
TA R K + AD ++ H + +A LET D GK E+ + ++ +F Y+AG ADK
Sbjct: 91 ETAETRGKKVRAIADKIKEHREALARLETLDTGKTLEE-SYADMDDIHNVFMYFAGLADK 149
Query: 61 IQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 119
G + P + + EP+GV QI PWN+PLL +WK+ PALA G ++V+K +E T
Sbjct: 150 DGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEIT 209
Query: 120 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 179
PL+ + V +L+ E G P G +N++ G G G ++ H EVD ++FTG TGK +++ A
Sbjct: 210 PLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNA 269
Query: 180 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239
A +N+ + LELGGK+P I+ +DAD + A + A +F+ GQ C AGSR V S+ D+
Sbjct: 270 A-NNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDK 328
Query: 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-- 297
F + K +G+ F + GP I +E KI Y+ GA + GG+R
Sbjct: 329 FEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRD 388
Query: 298 --AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFT 355
G + +PTV T M I ++E+FGPV ++ ++ E IQ +N S YGLA VF+
Sbjct: 389 DLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFS 448
Query: 356 HNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 415
++ A + L++G+VWIN F + A P+GGYKQSG GRE G L YL K ++T
Sbjct: 449 KDIGKAQRVANKLKLGTVWINDFHPYFAQAPWGGYKQSGIGRELGKEGLEEYLVSKHILT 508
Query: 416 ALKNPAW 422
Sbjct: 509 NTNPQLV 515
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* Length = 503 | Back alignment and structure |
|---|
Score = 742 bits (1919), Expect = 0.0
Identities = 162/423 (38%), Positives = 242/423 (57%), Gaps = 9/423 (2%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
M ERS+++L A ++ D IA LE +NGK A+ ++ + YYAG A
Sbjct: 77 MAGIERSRVMLEAARIIRERRDNIAKLEVINNGKTI-TEAEYDIDAAWQCIEYYAGLAPT 135
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
+ G G T EP+GV I+ WN+P ++ AWK PALACGN +V K + TP
Sbjct: 136 LSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTP 195
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
++ + ++++ HEAG+P G++N+V G G G+ L H V K++FTGS TGK V++++A
Sbjct: 196 VTGVILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSA 254
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
K +K VTLELGGKSP ++ +D +++ A A A F QGQ C G+R FV + QF
Sbjct: 255 K-TVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQF 313
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--- 297
+E+ VVGDP + G I Q +K+L ++ GA++ GGE L
Sbjct: 314 LEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSD 373
Query: 298 ---AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVF 354
GY++ P V +DDM K+EIFGPV S+L + +EV+QR+N + +GLA+GVF
Sbjct: 374 PKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVF 433
Query: 355 THNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 414
T ++ A+ + L G+ +IN + + +PFGGYK SG GRE G ++ Y Q+K V+
Sbjct: 434 TRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYSQLKTVI 493
Query: 415 TAL 417
+
Sbjct: 494 VEM 496
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} Length = 515 | Back alignment and structure |
|---|
Score = 738 bits (1908), Expect = 0.0
Identities = 173/430 (40%), Positives = 254/430 (59%), Gaps = 12/430 (2%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
A ER + +LR A+L+E+H DE+A +E D G+ + +V F +YA +A+
Sbjct: 83 TKAKERKRYLLRIAELIEKHADELAVMECLDAGQVLRI-VRAQVARAAENFAFYAEYAEH 141
Query: 61 -IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 119
++ T P D + T+ P G G I PWN PL++ W++ PALA GNT+VLK AE +
Sbjct: 142 AMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWS 201
Query: 120 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 179
P +A ++++L EA LPPGV N+V G+G AGAAL +H V L TG T TGKIV++ A
Sbjct: 202 PFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNA 261
Query: 180 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239
A +LK ++ ELGGKSP +V DAD+++A + + +F G+ C A SR V E +++
Sbjct: 262 A-DHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFED 320
Query: 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-- 297
FV K A VG P + GP I E +++L Y+ +G GA+L GGER
Sbjct: 321 FVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTS 380
Query: 298 ------AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAA 351
++G Y+ PTVF G ++ M IA++EIFGPV + +KD +E ++++N ++YGLAA
Sbjct: 381 FRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAA 439
Query: 352 GVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVK 411
VFT +L+ A+ L L G V++N +V PFGG K SG RE G+Y+L Y +K
Sbjct: 440 YVFTRDLERAHRLALELEAGMVYLNSHNVRHLPTPFGGVKGSGDRREGGTYALDFYTDLK 499
Query: 412 AVVTALKNPA 421
+ L+ P
Sbjct: 500 TIALPLRPPH 509
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} Length = 517 | Back alignment and structure |
|---|
Score = 738 bits (1907), Expect = 0.0
Identities = 169/426 (39%), Positives = 243/426 (57%), Gaps = 7/426 (1%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA-D 59
M+ R +I+ R AD++ ND ++ LET D GKP +++ + F ++ G A
Sbjct: 71 MSPMARGRILKRAADIMRERNDALSTLETLDTGKPIQETIVADPTSGADAFEFFGGIAPS 130
Query: 60 KIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 119
+ G P G T P+GV I WN+P + WK PAL GN +V K +E T
Sbjct: 131 ALNGDYIPLGGD-FAYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENT 189
Query: 120 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 179
PL AL ++++L EAGLP G+ N++ G T G L +H +V K++ TGS TG+ V A
Sbjct: 190 PLGALKIAEILIEAGLPKGLFNVIQGDRDT-GPLLVNHPDVAKVSLTGSVPTGRKVAAAA 248
Query: 180 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239
A +LK VT+ELGGKSP IV +DAD++ A A F++ GQ C G+R FV + +
Sbjct: 249 A-GHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKAR 307
Query: 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGG---ERL 296
F+E ++GDP GP + Q EK+L YI G GA L TGG +
Sbjct: 308 FLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNV 367
Query: 297 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH 356
+G Y++PTVF V DDM IA++EIFGPV +L + D DEV+ R+NA+++GLA GVFT
Sbjct: 368 AGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTA 427
Query: 357 NLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 416
+L A+ ++ L G++WIN +++ IPFGG KQSG GRE + +L +Y ++K V +
Sbjct: 428 DLARAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSAAALEHYSELKTVYVS 487
Query: 417 LKNPAW 422
Sbjct: 488 TGKVDA 493
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A Length = 495 | Back alignment and structure |
|---|
Score = 726 bits (1877), Expect = 0.0
Identities = 148/415 (35%), Positives = 227/415 (54%), Gaps = 4/415 (0%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
T R++ +L+ AD++E + A LE+ + GKP + E+P +FR++AG A
Sbjct: 79 TTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARC 138
Query: 61 IQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 119
+ GL A + +P+GV I PWN+PL+M AWK+ PALA GN +VLK +E T
Sbjct: 139 LNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEIT 198
Query: 120 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 179
PL+AL +++L + P GV+NI+ G G T G L H +V ++ TGS TG+ ++
Sbjct: 199 PLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHT 257
Query: 180 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239
A S++K +ELGGK+P IV +DAD++ E ++N GQ C A R + + +YD
Sbjct: 258 A-SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDT 316
Query: 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGV-DGGAKLETGGERLGA 298
VEK A G P + GP E++ K + G K+ TGGE+
Sbjct: 317 LVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKG 376
Query: 299 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNL 358
GYY PT+ G D I + E+FGPV S+ + + ++V+ +N SQYGLA+ V+T ++
Sbjct: 377 NGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDV 436
Query: 359 DTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 413
A+ + L+ G W+N + + +P GG K SG G++ Y L +Y V+ V
Sbjct: 437 GRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHV 491
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* Length = 498 | Back alignment and structure |
|---|
Score = 725 bits (1874), Expect = 0.0
Identities = 144/419 (34%), Positives = 223/419 (53%), Gaps = 4/419 (0%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
T ERS +L+ AD +E+ DE AALE + GKP E+P +R++AG
Sbjct: 81 TTPAERSNALLKIADAIEKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRN 140
Query: 61 IQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 119
+ A P + +PIG+ G I PWN+PL+M AWK+ PA+ GNT+V K +EQT
Sbjct: 141 LHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKLAPAIGGGNTVVFKPSEQT 200
Query: 120 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 179
PL+AL +++L+ + LP GV+N+++G G T G AL +H +V ++ TG TGK VL A
Sbjct: 201 PLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAAA 259
Query: 180 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239
AK +K LELGGK+P IV DAD++ ++N GQ C A R + +Y++
Sbjct: 260 AK-TVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEK 318
Query: 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVD-GGAKLETGGERLGA 298
V + + GP I Q +++ ++ D ++ TGG
Sbjct: 319 LVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSD 378
Query: 299 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNL 358
+G++ +PTV G + I + E+FGPV S+ ++ D+ + +N S YGLA+ V+T ++
Sbjct: 379 EGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKDI 438
Query: 359 DTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 417
A L+ G WIN + +P GG KQSG G++ Y+L +Y V+ ++
Sbjct: 439 SKAMRAASRLQYGCTWINTHFMLTNEMPHGGIKQSGYGKDMSVYALEDYTAVRHIMINH 497
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} Length = 495 | Back alignment and structure |
|---|
Score = 663 bits (1714), Expect = 0.0
Identities = 152/424 (35%), Positives = 218/424 (51%), Gaps = 5/424 (1%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
+ER+ +I +L D L + G+P + Y+AG ADK
Sbjct: 67 TPPHERAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADK 126
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
+ EP+GV G I+ WN PL + K+ PAL G TIVLK A +TP
Sbjct: 127 VTWTETRTGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETP 186
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
L+A ++++ E GLP GVL++V G G G AL S+ ++D FTGS+ G+ V + AA
Sbjct: 187 LTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVGRRAA 245
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
+ LKP TLELGGKS I+ ED D+ A + ++ N GQ C +R S YD+
Sbjct: 246 E-MLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEI 304
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--A 298
V VG P Q GP I +Q ++ YI G++ GA+L GG R
Sbjct: 305 VAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLD 364
Query: 299 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNL 358
G++I+PTVF V + M IA++EIFGPV +I+ Y ++ I +N S YGLA V+T ++
Sbjct: 365 NGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDV 424
Query: 359 DTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 418
+ + +R G+ IN + FD PFGGYK SG GRE G + ++ Q K+V+ +
Sbjct: 425 PKGIKISQQIRTGTYGINWY-AFDPGSPFGGYKNSGIGRENGPEGVEHFTQQKSVLLPMG 483
Query: 419 NPAW 422
Sbjct: 484 YTVA 487
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A Length = 538 | Back alignment and structure |
|---|
Score = 656 bits (1695), Expect = 0.0
Identities = 146/422 (34%), Positives = 216/422 (51%), Gaps = 11/422 (2%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
+ ER+ I+++ A ++ R E +A + GKP+++ A + YYA +
Sbjct: 93 VNPEERANILVKAAAIIRRRKHEFSAWLVHEAGKPWKE-ADADTAEAIDFLEYYARQMIE 151
Query: 61 I-QGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 119
+ +G + + + P+GV I PWNF L + + GNT+VLK A T
Sbjct: 152 LNRGKEILSRPGEQNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTT 211
Query: 120 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 179
P+ A ++L +AGLP GV+N V G G G L H + + FTGS G + + A
Sbjct: 212 PVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERA 271
Query: 180 AK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHE 234
A ++LK V +E+GGK +V DAD+D AAE + F GQ C AGSR +H+
Sbjct: 272 AVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHK 331
Query: 235 SVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGE 294
VYD+ +EK ALA VGDP GP ID + FEKI+ YI G G +L TGGE
Sbjct: 332 DVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGE 390
Query: 295 RLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVF 354
+ G++I+PT+ + + +I ++EIFGPV + K D D ++ +N ++YGL V
Sbjct: 391 GDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVI 450
Query: 355 THNLDTANTLMRALRVGSVWIN--CFDVFDAAIPFGGYKQSGQG-REKGSYSLSNYLQVK 411
T N R VG+++ N C PFGG+K SG + G L+ ++Q K
Sbjct: 451 TRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHMQAK 510
Query: 412 AV 413
V
Sbjct: 511 TV 512
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} Length = 497 | Back alignment and structure |
|---|
Score = 647 bits (1671), Expect = 0.0
Identities = 143/416 (34%), Positives = 227/416 (54%), Gaps = 6/416 (1%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
+ +ER + + ++ E+ + ++A + + G P + + + + R + +
Sbjct: 82 TSPHERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKE 141
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
A +G ++ IGV G I PWN+P+ KV PAL G T+VLK +E P
Sbjct: 142 FSFQEALIEGNEQAILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAP 201
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
LSA+ +++L EA LP GV N+++G G G+ L++H +++ ++FTGST GK + + A+
Sbjct: 202 LSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNAS 261
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
LK V LELGGK I+ DAD+D A + F+N GQ C A +R V +++YD+
Sbjct: 262 N-TLKRVCLELGGKGANIIFADADID-ALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKA 319
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA-- 298
++ A +A K VG + G GP + EQ++KI I+SG+D GA L TGG L
Sbjct: 320 IKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGM 379
Query: 299 -KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN 357
+GYY++PTVF VK M I ++EIFGPV S+L + DE + +N ++YGL + + +
Sbjct: 380 ERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQD 439
Query: 358 LDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 413
+ +R G V +N + FGG K SG+ RE G + + +L KA+
Sbjct: 440 RSKCRRIAAQVRSGMVEVNGHE-LPGGSYFGGVKFSGRAREGGLWGIKEFLDTKAI 494
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} Length = 478 | Back alignment and structure |
|---|
Score = 643 bits (1661), Expect = 0.0
Identities = 153/417 (36%), Positives = 232/417 (55%), Gaps = 9/417 (2%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
+ ER ++ + E D+I T + G P S + M F D
Sbjct: 64 TSVKERQALLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDN 123
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
+ D + E IGV+G I PWNFP + K+ A A G+ +VLK +E+TP
Sbjct: 124 YEFEERRGDD----LVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETP 179
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
+A+ ++++ + G+P GV N+V+G G G L+ H +V ++FTGS TG +++ AA
Sbjct: 180 FAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAA 239
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
K + K V+LELGGKSP+IV +D D+ +AA+ + N GQ C AG+R V + D F
Sbjct: 240 K-DFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAF 298
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA-- 298
+ + + VG+P + G Q GP I +QF+++ YI G++ GA+L GG
Sbjct: 299 LAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGL 358
Query: 299 -KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN 357
KGY+ +PT+F V + M IA++EIFGPV S++ Y DLDE IQ +N ++YGLA V +
Sbjct: 359 EKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKD 418
Query: 358 LDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 414
+T + + R++ G+V IN +PFGGYKQSG GRE G Y + +L+VK++
Sbjct: 419 KETLHKVARSIEAGTVEINEAG-RKPDLPFGGYKQSGLGREWGDYGIEEFLEVKSIA 474
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* Length = 516 | Back alignment and structure |
|---|
Score = 634 bits (1638), Expect = 0.0
Identities = 140/423 (33%), Positives = 215/423 (50%), Gaps = 13/423 (3%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
+RS+++L+ A L+ R E+ A ++ GK + + A +V YYA A +
Sbjct: 93 WPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVE-ASADVAEAIDFIEYYARAALR 151
Query: 61 IQGLTAPADGP--YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 118
+ ++ + P+G I PWNFP+ +F + +A GNT++ K AE
Sbjct: 152 YRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAED 211
Query: 119 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 178
+ V ++ HEAG PPGV+N + G G GA L H + + FTGS G + +
Sbjct: 212 AVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEA 271
Query: 179 AAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVH 233
A + + K +E GGK+ IV E AD D AAE + + QGQ C A SR +
Sbjct: 272 AGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILT 331
Query: 234 ESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGG 293
+ Y+ +E+ A + VG P + GP + +EQ K+L YI G + G +L GG
Sbjct: 332 QGAYEPVLERVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGG 389
Query: 294 ERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGV 353
+RL +GY+I PTVFT V IA++EIFGPV S+++ KD E ++ +N + YGL GV
Sbjct: 390 KRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGV 449
Query: 354 FTHNLDTANTLMRALRVGSVWIN--CFDVFDAAIPFGGYKQSGQGREKGS-YSLSNYLQV 410
++ + R VG+++ N PFGG+K SG + G+ L +L++
Sbjct: 450 YSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEM 509
Query: 411 KAV 413
KAV
Sbjct: 510 KAV 512
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} Length = 508 | Back alignment and structure |
|---|
Score = 593 bits (1531), Expect = 0.0
Identities = 146/417 (35%), Positives = 219/417 (52%), Gaps = 8/417 (1%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
A ERS II R A+LLE H +EI ++G + A E+ + + + A + +
Sbjct: 69 TPAAERSAIIYRAAELLEEHREEIVEWLIKESGSTRSK-ANLEITLAGNITKESASFPGR 127
Query: 61 IQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 119
+ G +P++ P + GV G I PWNFPL + V PALA GN +V+K A T
Sbjct: 128 VHGRISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDT 187
Query: 120 PLSALYVS-KLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 178
P++ + ++ EAG+P GV++ V+G G G +H ++FTGST G+ V +L
Sbjct: 188 PVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGEL 247
Query: 179 AAKS-NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 237
A +K V LELGG +PF+V DAD+D AA+ A F +QGQ C + +R V +V+
Sbjct: 248 AINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVH 307
Query: 238 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 297
D+F+EK GDP G GP I+ Q + + I GA ++ G
Sbjct: 308 DEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI-- 365
Query: 298 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN 357
+G + P VF+ V DM IA++EIFGP+ S+LK D + +NAS +GL+A V++ +
Sbjct: 366 -EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKD 424
Query: 358 LDTANTLMRALRVGSVWINCFDVFDAA-IPFGGYKQSGQGREKGSYSLSNYLQVKAV 413
+D A + G V IN V D + FGG K SG GR G +++ + + +
Sbjct: 425 IDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFNGDWAIEEFTTDRWI 481
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* Length = 501 | Back alignment and structure |
|---|
Score = 557 bits (1438), Expect = 0.0
Identities = 133/432 (30%), Positives = 196/432 (45%), Gaps = 17/432 (3%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
M ER ++ + AD++ER+ D A + + GKP A EV R K
Sbjct: 74 MPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSA-AVGEVKAAVDRLRLAELDLKK 132
Query: 61 IQGLTAPADGPYHVQ-----TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKT 115
I G P D Y EP+GV I P+N+PL K+ + GN +V+K
Sbjct: 133 IGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKP 192
Query: 116 AEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 175
+ PL A K L +AG PP + +++ G + + V ++FTGST G+
Sbjct: 193 SISDPLPAAMAVKALLDAGFPPDAIALLNLPGKE-AEKIVADDRVAAVSFTGSTEVGER- 250
Query: 176 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES 235
+ +K +ELGG P IV EDAD+D AA+ ++ GQ C A
Sbjct: 251 --VVKVGGVKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERP 308
Query: 236 VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER 295
VY + VE+ VGDP + GP I ++++ I V+ G ++ GG R
Sbjct: 309 VYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR 368
Query: 296 LGAKGYYIKPTVFTG---VKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAG 352
LG Y++PT DM++ K E+F PV ++ KDLD+ I+ +N YGL A
Sbjct: 369 LG--PTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAA 426
Query: 353 VFTHNLDTANTLMRALRVGSVWINCFDVFDAAI-PFGGYKQSGQGREKGSYSLSNYLQVK 411
VF ++ +R L VG+++IN PFGG K+SG RE Y++ K
Sbjct: 427 VFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYK 486
Query: 412 AVVTALK-NPAW 422
+V K W
Sbjct: 487 TIVFNYKGKGVW 498
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* Length = 505 | Back alignment and structure |
|---|
Score = 549 bits (1416), Expect = 0.0
Identities = 149/427 (34%), Positives = 209/427 (48%), Gaps = 15/427 (3%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
+ER ++ +ADLLE + I L + KP + A EV T + R+ A A +
Sbjct: 68 RPIHERVDLLYAWADLLEERKEIIGELIMHEVAKPKKS-AIGEVSRTADIIRHTADEALR 126
Query: 61 IQGLTAPADGPYHVQ------TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLK 114
+ G T D EP+GV I P+N+P+ + A K+ PAL GNT+V K
Sbjct: 127 LNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFK 186
Query: 115 TAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKI 174
A Q LS + + + L +AG P G++ +V+G G G L H +D + FTG TTTG+
Sbjct: 187 PATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGER 246
Query: 175 VLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHE 234
++ K+ + PV LELGGK P IV +DAD+ A F GQ C A R FV +
Sbjct: 247 ---ISEKAKMIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQD 303
Query: 235 SVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGE 294
SV DQ V L + VG P P ID + I I ++ GA L +G +
Sbjct: 304 SVADQLVANIKELVEQLTVGSPED-DADITPVIDEKSAAFIQGLIDDALENGATLLSGNK 362
Query: 295 RLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVF 354
R +G + PT+ V M +A +E FGPV I++ KD +E I SN S YGL A +F
Sbjct: 363 R---QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIF 419
Query: 355 THNLDTANTLMRALRVGSVWINCFDVFDA-AIPFGGYKQSGQGREKGSYSLSNYLQVKAV 413
T + D A + + L VG+V IN PF G K+SG G + SL + + +
Sbjct: 420 TKDTDRAINIGKHLEVGTVHINAKTERGPDHFPFLGVKKSGLGVQGIKPSLLSMTRERVT 479
Query: 414 VTALKNP 420
V L
Sbjct: 480 VLNLAEN 486
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* Length = 486 | Back alignment and structure |
|---|
Score = 544 bits (1404), Expect = 0.0
Identities = 132/428 (30%), Positives = 221/428 (51%), Gaps = 15/428 (3%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
+ +R I++ A ++ +E+A + D GKP +Q A+ EV + F+ A + +
Sbjct: 53 LPITKRYNILMNIAKQIKEKKEELAKILAIDAGKPIKQ-ARVEVERSIGTFKLAAFYVKE 111
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
+ P+D + T EP+G+ G I P+NFPL + A K+ PA+A GN IV + + P
Sbjct: 112 HRDEVIPSDD-RLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAP 170
Query: 121 LSALYVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 176
L + ++K++ A +P GV N+++G G G + + +V+ ++FTGS+ G+++
Sbjct: 171 LVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELIT 230
Query: 177 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 236
+ A K + LELGG +P IV +DAD++KA F GQ C + V ES+
Sbjct: 231 KKAG---FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESI 287
Query: 237 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 296
D+F+E A VG+P GP I E E + K + +D G KL GG+R
Sbjct: 288 ADKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR- 346
Query: 297 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH 356
PT+ V D ++ K E F PV I++ + +E+I +N+++YGL + +FT+
Sbjct: 347 --DKALFYPTILE-VDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTN 402
Query: 357 NLDTANTLMRALRVGSVWINCFDVFD-AAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 415
+++ + L G V IN +F +PFGG K+SG GRE Y++ +K ++
Sbjct: 403 DINKSLKFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTIII 462
Query: 416 ALKNPAWL 423
+ +
Sbjct: 463 SKAENLYF 470
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} Length = 490 | Back alignment and structure |
|---|
Score = 530 bits (1367), Expect = 0.0
Identities = 119/415 (28%), Positives = 180/415 (43%), Gaps = 6/415 (1%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
+R +++ RFA L+ DE+A + + GKP + + TEV +
Sbjct: 61 RPLEQRIELLERFAATLKSRADELARVIGEETGKPLWE-SATEVTSMVNKVAISVQAFRE 119
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
G + H+P GV P+NFP + + PAL GN +V K +E TP
Sbjct: 120 RTGEKSGPLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTP 179
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
A K +AGLP GVLN+V G G G ALA+H +D L FTGS+ TG ++
Sbjct: 180 KVAELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFG 238
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY-DQ 239
K + LE+GG +P +V E AD+D A + F + GQ C R V + + D
Sbjct: 239 GQPQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDA 298
Query: 240 FVEKANALAMKRVVGDPF-KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA 298
+ + A++ VG + G I E +LK + GA+ +
Sbjct: 299 LLARLVAVSATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPID 358
Query: 299 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNL 358
+ P + V +E FGP+ +++Y D I+ +NA+QYGLAAG+ + +
Sbjct: 359 GAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSR 417
Query: 359 DTANTLMRALRVGSVWIN-CFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKA 412
+ + R G V N ++ PFGG SG R Y+ A
Sbjct: 418 ERFEQFLVESRAGIVNWNKQLTGAASSAPFGGIGASGNHRPSAYYAADYCAYPVA 472
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* Length = 534 | Back alignment and structure |
|---|
Score = 530 bits (1367), Expect = 0.0
Identities = 99/467 (21%), Positives = 166/467 (35%), Gaps = 48/467 (10%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
+T +R+ + LL+ + A+ T ++G SA ++ YYA
Sbjct: 63 LTYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSA-VDIDGGIFTLSYYAKLGAS 121
Query: 61 IQGLTAPADGP----------YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNT 110
+ + A DG L GVA I +NFP K PAL G
Sbjct: 122 LGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVP 181
Query: 111 IVLKTAEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGST 169
+++K A T + + +AG LPPG L+I+ G ++ L D ++FTGS
Sbjct: 182 VIVKPATATAWLTQRMVADVVDAGILPPGALSIICG---SSAGLLDQIRSFDVVSFTGSA 238
Query: 170 TTGKIVLQLAAKS-NLKPVTLELGGKSPFIVCEDADV-----DKAAELAHYALFFNQGQC 223
T + A + ++ + I+C DA D + + GQ
Sbjct: 239 DTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQK 298
Query: 224 CCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGV 283
C A R FV E+ + +E A K VG+P ++ G + EQ+E +L I +
Sbjct: 299 CTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALR 358
Query: 284 DGGAKLETGGERL-----GAKGYYIKPTVF--TGVKDDMLIAKDEIFGPVQSILKYKDLD 336
+ + P +F + L+ E+FGPV S+ Y+
Sbjct: 359 EEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTT 418
Query: 337 --------EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAI--- 385
+ + Q L A +++++ L L ++
Sbjct: 419 DTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTG 478
Query: 386 --------PFGGYKQSGQGREKGSY-SLSNYLQVKAVVTALKNPAWL 423
GG ++G G E G +L+ Y + A+ A L
Sbjct: 479 HGNVMPMSLHGGPGRAGGGEELGGLRALAFYHRRSAIQAASAAIGTL 525
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* Length = 479 | Back alignment and structure |
|---|
Score = 490 bits (1264), Expect = e-172
Identities = 142/415 (34%), Positives = 225/415 (54%), Gaps = 4/415 (0%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
+ A ER+ + + + + EI+AL + GK + A+ EV T Y A WA +
Sbjct: 63 LPAIERASWLRKISAGIRERASEISALIVEEGGKIQQL-AEVEVAFTADYIDYMAEWARR 121
Query: 61 IQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 119
+G +D P ++ +GV I+PWNFP + A K+ PAL GNTIV+K +E T
Sbjct: 122 YEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFT 181
Query: 120 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 179
P +A+ +K++ E GLP GV N+V G G T G LA + +V ++ TGS + G+ ++ A
Sbjct: 182 PNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATA 241
Query: 180 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239
A N+ V LELGGK+P IV +DAD++ A + + N GQ C R +V + +YDQ
Sbjct: 242 A-KNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQ 300
Query: 240 FVEKANALAMKRVVGDPF-KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA 298
FV + G+P + I GP I++ E++ + + V+ GA++ GG+ +
Sbjct: 301 FVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEG 360
Query: 299 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNL 358
KGYY PT+ V+ +M I +E FGPV ++ + L++ I +N S YGL + ++T NL
Sbjct: 361 KGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNL 420
Query: 359 DTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 413
+ A ++ L+ G +IN + G+++SG G G + L YLQ + V
Sbjct: 421 NVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVV 475
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* Length = 475 | Back alignment and structure |
|---|
Score = 488 bits (1258), Expect = e-171
Identities = 140/425 (32%), Positives = 213/425 (50%), Gaps = 15/425 (3%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
++ ER+ + + AD+L R ++I A+ + + K + +SA +EV T + Y A +
Sbjct: 59 LSYIERAAYLHKVADILMRDKEKIGAILSKEVAKGY-KSAVSEVVRTAEIINYAAEEGLR 117
Query: 61 IQGLTAPADGPYHVQ------TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLK 114
++G EP+G+ I P+N+P+ + K+ PAL GN I K
Sbjct: 118 MEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFK 177
Query: 115 TAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKI 174
Q +S L +++ EAGLP GV N ++G G G + H V+ + FTGST G+
Sbjct: 178 PPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGER 237
Query: 175 VLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHE 234
+ ++A ++P+ LELGGK IV EDAD++ A+ F GQ C A R V E
Sbjct: 238 IGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVME 294
Query: 235 SVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGE 294
SV D+ VEK + +G+P P ID++ + + I D GA T +
Sbjct: 295 SVADELVEKIREKVLALTIGNPED-DADITPLIDTKSADYVEGLINDANDKGATALTEIK 353
Query: 295 RLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVF 354
R +G I P +F V DM +A +E FGPV I++ ++E I+ SN S+YGL A +F
Sbjct: 354 R---EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIF 410
Query: 355 THNLDTANTLMRALRVGSVWINCFDVFDA-AIPFGGYKQSGQGREKGSYSLSNYLQVKAV 413
T++ A + L VG+V IN PF G K+SG G + YS+ VK+V
Sbjct: 411 TNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSV 470
Query: 414 VTALK 418
V +K
Sbjct: 471 VFDIK 475
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} Length = 1026 | Back alignment and structure |
|---|
Score = 483 bits (1246), Expect = e-163
Identities = 131/422 (31%), Positives = 212/422 (50%), Gaps = 11/422 (2%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
R++ +L+ A + E++A + + GK ++Q A +V YYA +
Sbjct: 587 TDPRTRAEYLLKAAQAARKRLFELSAWQVLEIGKQWDQ-AYADVTEAIDFLEYYAREMIR 645
Query: 61 IQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 119
+ P +EP GVA I PWNFPL + A+ GN +V K + T
Sbjct: 646 LGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGIT 705
Query: 120 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 179
+ ++ +L EAGLP GV N G G G L H ++ +AFTGS TG +++ A
Sbjct: 706 SIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERA 765
Query: 180 AK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHE 234
AK +N+K + E+GGK+ I+ +DAD+D+A Y+ F QGQ C A SR V +
Sbjct: 766 AKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLD 825
Query: 235 SVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGE 294
+VYD+F+E+ ++A VG G D + + I +Y G G L
Sbjct: 826 AVYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREGHVLY-ESP 884
Query: 295 RLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVF 354
+GY++ T+ G+K + IA++EIFGPV ++++ KD D+ I+ +N++Q+ L G+F
Sbjct: 885 VPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIF 944
Query: 355 THNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQG-REKGSYSLSNYLQVK 411
+ + + R RVG+++IN + PFGG + SG G + G L +++ +
Sbjct: 945 SRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGGPDYLLHFMDPR 1004
Query: 412 AV 413
V
Sbjct: 1005 VV 1006
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} Length = 485 | Back alignment and structure |
|---|
Score = 455 bits (1174), Expect = e-159
Identities = 128/415 (30%), Positives = 204/415 (49%), Gaps = 9/415 (2%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
T +R ++ + L + D+I + + G + + E+ T + + +
Sbjct: 63 STTEDRKAVLQKARGYLHENRDDIIMMIARETGGTIIK-STIELEQTIAILDEAMTYTGE 121
Query: 61 IQGL-TAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 118
+ G+ P+D + P+GV I P+NFP+ + + PA+A GN++V K Q
Sbjct: 122 LGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQ 181
Query: 119 TPLSA-LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 177
T +S ++K AGLP GVLN++ G + ++ ++FTGST G+ + +
Sbjct: 182 TAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGE 241
Query: 178 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 237
+A K + LELGG +PF V DADVD+A + A + F +QGQ C +R VH+ VY
Sbjct: 242 IAG-RAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVY 300
Query: 238 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 297
D+FVEK A + GD GP I+ Q EK L+ I G +L G+R+
Sbjct: 301 DEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKRV- 359
Query: 298 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHN 357
G + P VF G ++ IA+ E+F P+ +I+K E I +N ++YGL++ VFT +
Sbjct: 360 --GNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSD 417
Query: 358 LDTANTLMRALRVGSVWINCFDVFDAA-IPFGGYKQSGQGREKGSYSLSNYLQVK 411
L+ + G +N V D+ I FGG K SG GR + + + K
Sbjct: 418 LEKGEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGRFGNPWVVEEFTVTK 472
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* Length = 500 | Back alignment and structure |
|---|
Score = 452 bits (1165), Expect = e-157
Identities = 117/421 (27%), Positives = 194/421 (46%), Gaps = 11/421 (2%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
+ A +R +I+ + D L + +L + + GK EV + Y G +
Sbjct: 78 IPAPKRGEIVRQIGDALREKIQVLGSLVSLEMGKIL-VEGVGEVQEYVDICDYAVGLSRM 136
Query: 61 IQGLTAPADGPYH-VQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 119
I G P++ H + P+G+ G I +NFP+ ++ W A+ CGN + K A T
Sbjct: 137 IGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTT 196
Query: 120 PLSALYVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 175
L ++ V+K++ + LP + ++ G G G A+A V+ L+FTGST GK V
Sbjct: 197 SLISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLSFTGSTQVGKQV 255
Query: 176 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES 235
+ + LELGG + I EDAD+ A +A GQ C R F+HES
Sbjct: 256 GLMVQER-FGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHES 314
Query: 236 VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER 295
++D+ V + + VG+P+ + GP + L + G + GG+
Sbjct: 315 IHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKV 374
Query: 296 LGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFT 355
+ G Y++PT+ TG+ D IA E F P+ + K+++ +EV +N + GL++ +FT
Sbjct: 375 MDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFT 434
Query: 356 HNLDTANTLM--RALRVGSVWINCFDV-FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKA 412
+L + + G V +N + FGG K +G GRE GS + Y++
Sbjct: 435 KDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMRRST 494
Query: 413 V 413
Sbjct: 495 C 495
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} Length = 497 | Back alignment and structure |
|---|
Score = 438 bits (1128), Expect = e-151
Identities = 150/418 (35%), Positives = 215/418 (51%), Gaps = 7/418 (1%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
+TA R ++ FA+ + + +A + + GK A+ EV +T Y A
Sbjct: 69 LTARTRQNMLRTFANKIRENKHILAPMLVAEQGKLLSV-AEMEVDVTATFIDYGCDNALT 127
Query: 61 IQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 119
I+G P+D + P GV I WNFPL + K+GPAL GNT+VLK ++T
Sbjct: 128 IEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQET 187
Query: 120 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 179
PL+ + ++ EAGLP GVLN+++G G G L + TGST GK + + +
Sbjct: 188 PLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTS 247
Query: 180 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239
A + PV LELGGK+P +V +DAD+DKAAE A + F N GQ C R +VH SVYD+
Sbjct: 248 A-EYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDE 306
Query: 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL--- 296
F+ K L VGDP Q GP+ + + + I + + GA + TGG+
Sbjct: 307 FMAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVE 366
Query: 297 -GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFT 355
G + +PTV VK D ++ +E FGP+ I+K +++ I+ N S YGL+A V T
Sbjct: 367 GFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHT 426
Query: 356 HNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 413
+ N + L VG V+IN G+KQSG G E G + L YL+ K V
Sbjct: 427 QSFANINQAISDLEVGEVYINRGMGEQHQGFHNGWKQSGFGGEDGKFGLEQYLEKKTV 484
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} Length = 481 | Back alignment and structure |
|---|
Score = 433 bits (1117), Expect = e-150
Identities = 158/418 (37%), Positives = 238/418 (56%), Gaps = 3/418 (0%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
+TA ER+ I+ + +L+ H D++A L T + GKP + A+ E+ ++A +
Sbjct: 66 LTAKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAE-AKGEISYAASFIEWFAEEGKR 124
Query: 61 IQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 119
I G T P + + +PIGV I PWNFP M K GPALA G T+VLK A QT
Sbjct: 125 IYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQT 184
Query: 120 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 179
P SAL +++L AG+P GV N+V+G G L S+ V KL+FTGST G+ +++
Sbjct: 185 PFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQC 244
Query: 180 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239
A ++K V+LELGG +PFIV +DAD+DKA E A + F N GQ C +R +V + VYD+
Sbjct: 245 A-KDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDR 303
Query: 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAK 299
F EK K +GD G+ GP ID + K+ ++I ++ GA++ GG+
Sbjct: 304 FAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERG 363
Query: 300 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLD 359
G + +PT+ V + ++K+E FGP+ + ++KD +VI ++N +++GLAA + +L
Sbjct: 364 GNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLS 423
Query: 360 TANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 417
+ AL G V IN + + PFGG K SG GRE Y + +YL++K + L
Sbjct: 424 RVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIGL 481
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q Length = 484 | Back alignment and structure |
|---|
Score = 433 bits (1116), Expect = e-150
Identities = 163/418 (38%), Positives = 242/418 (57%), Gaps = 3/418 (0%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
TA ER+ I+ R+ DL+ ++D++A + T + GKP + A+ E+ ++A +
Sbjct: 69 KTAKERAAILRRWFDLVIANSDDLALILTTEQGKPLAE-AKGEIAYAASFIEWFAEEGKR 127
Query: 61 IQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 119
+ G T P + + EPIGV I PWNFP M A KVGPALA G IV+K AE T
Sbjct: 128 VAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAEST 187
Query: 120 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 179
P SAL ++ L AG+P GVL++V G G + S+ V KL+FTGST G++++ +
Sbjct: 188 PFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQS 247
Query: 180 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239
A +K +TLELGG +PFIV +DAD+D A E A + + N GQ C +R FVHE VYD
Sbjct: 248 A-PTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDA 306
Query: 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAK 299
F +K A K VG + G GP I+ +K+ +I + GA L TGG+R
Sbjct: 307 FADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALG 366
Query: 300 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLD 359
+ +PTV TGVK DM +AK+E FGP+ + ++ +E+++ +N +++GLAA +++ ++
Sbjct: 367 HGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDIG 426
Query: 360 TANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 417
+ AL G V IN + + PFGG KQSG GRE Y + +Y+ +K + A+
Sbjct: 427 RVWRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLCVAV 484
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} Length = 504 | Back alignment and structure |
|---|
Score = 433 bits (1115), Expect = e-149
Identities = 164/419 (39%), Positives = 241/419 (57%), Gaps = 5/419 (1%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
TA ER+ I+ ++ DL+ + D+IA + T + GKP + A+ EV ++A A +
Sbjct: 89 KTAKERAGILRKWFDLIIANADDIALIMTSEQGKPLAE-ARGEVLYAASFIEWFAEEAKR 147
Query: 61 IQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 119
+ G T PA + + +P+GV I PWNFP M K PALA G T++++ A+ T
Sbjct: 148 VYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLT 207
Query: 120 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 179
PL+AL + L +AG+P GVL IV+G GA L S+ V KL+FTGST G++++
Sbjct: 208 PLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQC 267
Query: 180 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239
A +K ++LELGG +PFIV +DAD+D A + A + + N GQ C +R +V VYD+
Sbjct: 268 A-PTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDK 326
Query: 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAK 299
F EK A + VG+ + G+ GP I+ + K+ +I V GAKL TGG+ LG
Sbjct: 327 FAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKELG-- 384
Query: 300 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLD 359
G + +P + TGV DML+AK+E FGP+ + + +EVI ++N + +GLAA +T N
Sbjct: 385 GLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFS 444
Query: 360 TANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 418
A + AL G V N + + PFGG KQSG GRE Y + YL+ K + +A K
Sbjct: 445 RAIRVSEALEYGMVGHNTGLISNEVAPFGGVKQSGLGREGSKYGIEEYLETKYICSAYK 503
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} Length = 506 | Back alignment and structure |
|---|
Score = 428 bits (1103), Expect = e-148
Identities = 143/424 (33%), Positives = 214/424 (50%), Gaps = 4/424 (0%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
R K + D L+ + +EI + ++GKP+++ AQ EV F Y A
Sbjct: 68 WPIETRRKWLEDIRDGLKENREEIGRILCMEHGKPWKE-AQGEVDYAAGFFDYCAKHISA 126
Query: 61 IQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 119
+ T P + P+GV G I+PWNFP+ M A K+ ALA G V+K A +T
Sbjct: 127 LDSHTIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKLSAALAAGCPSVIKPASET 186
Query: 120 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 179
PL+ + ++ + LP G++N+V G G L H +V L+FTGST G+ ++
Sbjct: 187 PLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDT 246
Query: 180 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239
A +K + LELGG +PFIV +DAD++ AA+ F GQ C +R FVHE V D
Sbjct: 247 A-EQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADA 305
Query: 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA- 298
F +K K VGD GI GP I+ + F+K+ ++++ +D GA L G +
Sbjct: 306 FGQKLAERVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELG 365
Query: 299 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNL 358
G + PTV GV +M ++E FGP+ + ++ +EVI N +++GLA+ VFT +
Sbjct: 366 DGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLASYVFTADA 425
Query: 359 DTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 418
+ A + LR G V N PFGG K SG GRE G L +++ + V
Sbjct: 426 ERAQRVAAGLRFGHVGWNTGTGPTPEAPFGGMKASGIGREGGLEGLFEFVEAQTVPRGFA 485
Query: 419 NPAW 422
+
Sbjct: 486 ENLY 489
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* Length = 487 | Back alignment and structure |
|---|
Score = 425 bits (1094), Expect = e-146
Identities = 152/418 (36%), Positives = 235/418 (56%), Gaps = 7/418 (1%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
++A ERS ++ ++ +L+ ++ D++A + T ++GKP ++ A E+ + +++ A +
Sbjct: 67 VSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKE-AHGEILYSAFFLEWFSEEARR 125
Query: 61 IQGLTAPADGPYH-VQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 119
+ G L +PIGVA I PWNFP M KVG ALA G T+V+K AE T
Sbjct: 126 VYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDT 185
Query: 120 PLSALYVSKLLHEAGLPPGVLNIV---SGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 176
P SAL +++L +AG+P GV N++ G A+ + V K++FTGSTTTGKI+L
Sbjct: 186 PFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILL 245
Query: 177 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 236
AA +++K V++ELGG +PFIV + A+VD+A A + F N GQ C ++ V +
Sbjct: 246 HHAA-NSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGI 304
Query: 237 YDQFVEK-ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER 295
+D FV+ A A+ VG+ F+ G QGP I+ + EK+ K + V GA + TGG+R
Sbjct: 305 HDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKR 364
Query: 296 LGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFT 355
+ +PT+ V DML +E FGP+ ++K+ +E I +NA+ GLA ++
Sbjct: 365 HQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYS 424
Query: 356 HNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 413
+ + L VG V +N + PFGG KQSG GRE Y + YL++K V
Sbjct: 425 QDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYV 482
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} Length = 484 | Back alignment and structure |
|---|
Score = 420 bits (1081), Expect = e-144
Identities = 123/418 (29%), Positives = 191/418 (45%), Gaps = 3/418 (0%)
Query: 2 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 61
R++I+ A+ L+ H DE+A + T + GK + ++ EV + + YYA ++
Sbjct: 46 EPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSE-SKEEVELCVSICNYYADHGPEM 104
Query: 62 QGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 121
T + L + GV PWNFPL P GN I+LK A P
Sbjct: 105 LKPTKLNSDLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPG 164
Query: 122 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 181
SA +K++ AG P G L + +A + +A TGS G V + A K
Sbjct: 165 SAALTAKIIKRAGAPEGSLINLYPSYDQLADIIA-DPRIQGVALTGSERGGSAVAEAAGK 223
Query: 182 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 241
NLK T+ELGG FIV +DAD + + A +N GQ C + R V +S YD+ +
Sbjct: 224 -NLKKSTMELGGNDAFIVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVL 282
Query: 242 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY 301
+ + GDP + P + EK+ ++ +D GAK+ + +KG
Sbjct: 283 HELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQVKEAIDAGAKVFYQYPEIDSKGA 342
Query: 302 YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 361
+ +PT+ T + D + E+FGP+ + +D + IQ +N S YGL + V ++D A
Sbjct: 343 FFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRA 402
Query: 362 NTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKN 419
+ + G IN + +PFGG K+SG GRE L ++ V+ KN
Sbjct: 403 KKVSAQIETGMTVINGRWITSGELPFGGIKKSGYGRELSGLGLMAFVNEHLVIDVTKN 460
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A Length = 462 | Back alignment and structure |
|---|
Score = 415 bits (1069), Expect = e-143
Identities = 128/413 (30%), Positives = 193/413 (46%), Gaps = 3/413 (0%)
Query: 2 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 61
+ +R++ + L H +E+A T + GKP +Q A+ EV + L +YA +
Sbjct: 49 SVAQRAQTLRDIGQALRAHAEEMAQCITREMGKPIKQ-ARAEVTKSAALCDWYAEHGPAM 107
Query: 62 QGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 121
+ P+GV I+PWNFPL P L GN+ +LK A
Sbjct: 108 LNPEPTLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTG 167
Query: 122 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 181
A ++++L EAG P GV V+ + + + TGS G + A
Sbjct: 168 CAQMIARILAEAGTPAGVYGWVNANNEGVSQMIN-DPRIAAVTVTGSVRAGAAIGAQAGA 226
Query: 182 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 241
LK LELGG PFIV DAD++ A + A + N GQ C A R V E + F
Sbjct: 227 -ALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFT 285
Query: 242 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY 301
++ A A +GDP GP + +++ + +++ V GA+L GGE++ +G
Sbjct: 286 DRFVAAAAALKMGDPLVEENDLGPMARFDLRDELHQQVQASVAEGARLLLGGEKIAGEGN 345
Query: 302 YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTA 361
Y TV V DM + E+FGPV +I KD + +N S++GL+A +FT + A
Sbjct: 346 YYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLA 405
Query: 362 NTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 414
+ L G V+IN + DA + FGG K+SG GRE + L + V+ V
Sbjct: 406 AEMAARLECGGVFINGYSASDARVAFGGVKKSGFGRELSHFGLHEFCNVQTVW 458
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* Length = 510 | Back alignment and structure |
|---|
Score = 402 bits (1035), Expect = e-137
Identities = 88/445 (19%), Positives = 156/445 (35%), Gaps = 46/445 (10%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
+ +R+ ++ A LE +D+I A + P + E+ T R +A +
Sbjct: 49 LNNSKRASLLRTIASELEARSDDIIARAHLETALPEVR-LTGEIARTANQLRLFADVVNS 107
Query: 61 IQGLTAPADGP---------YHVQTLHEPIGVAGQIIPWNFPLLMFA--WKVGPALACGN 109
A D P ++ +G NFPL A ALA G
Sbjct: 108 GSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGC 167
Query: 110 TIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 165
+++K P ++ V++ + +A LP + ++ G G AL SH E+ + F
Sbjct: 168 PVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGF 227
Query: 166 TGSTTTGKIVLQLAAKS-NLKPVTLELGGKSPFIVCEDADVDKA--AELAHYALFFNQGQ 222
TGS G+ + LA + P ELG +P + A KA A+ ++ GQ
Sbjct: 228 TGSVGGGRALFNLAHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQ 287
Query: 223 CCCAGSRTFVHES-VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 281
C F + F+E A +L P I + +
Sbjct: 288 FCTKPGVVFALNTPETQAFIETAQSL------IRQQSPSTLLTPGIRDSYQS---QVVSR 338
Query: 282 GVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDML---IAKDEIFGPVQSILKYKDLDEV 338
G D G + + +F ++ ++EIFGP I+ +++ ++
Sbjct: 339 GSDDGIDVTFSQAE----SPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADM 394
Query: 339 IQRSNASQYGLAAGVFTHNLDT--ANTLMRAL--RVGSVWINCF---DVFDAAIPFGGYK 391
+ S L A + D + L+ L G + N + A+ GG
Sbjct: 395 LSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPY 454
Query: 392 QS---GQGREKGSYSLSNYLQVKAV 413
+ G+ ++ +L+ A
Sbjct: 455 PASTHSASTSVGAEAIHRWLRPVAY 479
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} Length = 452 | Back alignment and structure |
|---|
Score = 356 bits (915), Expect = e-120
Identities = 77/440 (17%), Positives = 146/440 (33%), Gaps = 35/440 (7%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
+ + KI + + +A ++G + + F Y ++
Sbjct: 26 YSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVE-DKVIKNHFASEFIYNKYKDEQ 84
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
G+ D T+ EP+G+ I+P P +K +L N I+ +
Sbjct: 85 TCGIL-EEDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAK 143
Query: 121 LSALYVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 176
S +KL+ +A G P ++ + AL H ++ + TG K
Sbjct: 144 NSTNDAAKLVLDAAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMVK--- 200
Query: 177 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 236
AA S+ KP G P ++ E AD+ +A + F+ G C + V + V
Sbjct: 201 --AAYSSGKPAIGVGAGNVPVVIDETADIKRAVASVLMSKTFDNGVVCASEQAVIVVDEV 258
Query: 237 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 296
YD+ E+ + + +++ ID KI+ + + E G ++
Sbjct: 259 YDEVKERFASHKAHVLSKTDAD-KVRKVLLIDGALNAKIVGQPATAI-----AEMAGVKV 312
Query: 297 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRS----NASQYGLAAG 352
A + V D A E P + + + ++ + ++ G +G
Sbjct: 313 PADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSG 371
Query: 353 VFTH---NLDTANTLMRALRVGSVWINCFDVFDA---AIPFGGYKQS--GQGREKGSYSL 404
++T+ N D ++ + IN F G G G+
Sbjct: 372 LYTNQDVNADRIRYFGDKMKTARILINIPTTHGGIGDLYNFNVAPSLTLGCGSWGGNSIS 431
Query: 405 SN-----YLQVKAVVTALKN 419
N + K V +N
Sbjct: 432 ENVGPKHLINKKTVAKRAEN 451
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} Length = 1001 | Back alignment and structure |
|---|
Score = 368 bits (946), Expect = e-118
Identities = 125/422 (29%), Positives = 198/422 (46%), Gaps = 16/422 (3%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
A R+ + + A LLE + AL + GK + A +E+ RYYA K
Sbjct: 569 TPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDD-ALSELREAADFCRYYAAQGRK 627
Query: 61 IQGLTAPADGP--YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 118
+ G GP GV I PWNFPL +F +V AL GN++V K AEQ
Sbjct: 628 LFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQ 687
Query: 119 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 178
TP A LLHEAG+P L +V+G G GAAL +H ++ + FTGST + + +
Sbjct: 688 TPRIAREAVALLHEAGIPKSALYLVTGDGR-IGAALTAHPDIAGVVFTGSTEVARSINRA 746
Query: 179 AAKSN--LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 236
A + + P+ E GG + I A ++ A+ + F + GQ C A FV E V
Sbjct: 747 LAAKDGPIVPLIAETGGINAMIADATALPEQVADDVVTSAFRSAGQRCSALRLLFVQEDV 806
Query: 237 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 296
D+ +E A + +GDP GP ID E +++ +I A+L G
Sbjct: 807 ADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARM-KTEARLHFAGPA- 864
Query: 297 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK--DLDEVIQRSNASQYGLAAGVF 354
+G ++ P +F + +E+FGP+ +++Y+ +L+ V++ + YGL GV
Sbjct: 865 -PEGCFVAPHIFELTEAG--QLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVH 921
Query: 355 THNLDTANTLMRALRVGSVWIN--CFDVFDAAIPFGGYKQSGQG-REKGSYSLSNYLQVK 411
+ D+ ++ ++VG++++N PFGG SG G + G + L+ + +
Sbjct: 922 SRIDDSIEAIIDRVQVGNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGGPHYLARFATEQ 981
Query: 412 AV 413
V
Sbjct: 982 TV 983
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 346 bits (889), Expect = e-115
Identities = 99/443 (22%), Positives = 157/443 (35%), Gaps = 48/443 (10%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA-- 58
+ ER+ + AD +E + I + + + G P + E TT R +A
Sbjct: 82 SSRKERAAFLRAIADEIEARAEAITEIGSQETGLPEAR-LNGERGRTTGQLRLFADHIEK 140
Query: 59 --------DKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLM--FAWKVGPALACG 108
D PA ++ + P+G NFPL ALA G
Sbjct: 141 GDYLDRRVDAAMPERQPAPRQ-EIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAG 199
Query: 109 NTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLA 164
+V+K P + V++ + A G+ PGV +++ G G AL H + +
Sbjct: 200 CPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVG 259
Query: 165 FTGSTTTGKIVLQLAAKS-NLKPVTLELGGKSPFIVCEDADVDKAAELAH---YALFFNQ 220
FTGS G+ + L A P ELG +P + +A +A L +L
Sbjct: 260 FTGSLAGGRALFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGA 319
Query: 221 GQCCCAGSRTFVHESV-YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 279
GQ C V E D+F A K GI + + +F
Sbjct: 320 GQFCTNPGIAVVIEGADADRFTTAAVEALAKVAPQTMLTDGIAKAYRDGQARFAT----- 374
Query: 280 RSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDML---IAKDEIFGPVQSILKYKDLD 336
K E + G P +F L +E+FGP+ +++
Sbjct: 375 ----RNAVKPLLATE---SSGRDASPNLFETTGAQFLADHALGEEVFGPLGLVVRVGSPA 427
Query: 337 EVIQRSNASQYGLAAGVFTHNLD--TANTLMRAL--RVGSVWINCF----DVFDAAIPFG 388
E+ + + Q L A + D TA L L + G V +N F +V D+ + G
Sbjct: 428 EMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVHGG 487
Query: 389 GYKQSGQGREK--GSYSLSNYLQ 409
Y S G+ S+ +L+
Sbjct: 488 PYPASTNFGATSVGTMSIRRFLR 510
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} Length = 464 | Back alignment and structure |
|---|
Score = 292 bits (749), Expect = 4e-95
Identities = 63/451 (13%), Positives = 137/451 (30%), Gaps = 54/451 (11%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
M+ + I+ AD +++A + + G Q + ++ + +
Sbjct: 31 MSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASK---HVYNYIKD 87
Query: 61 IQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 119
++ + + V + P+GV +IP P +K ++ GN+IV
Sbjct: 88 MKTIGMLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNA 147
Query: 120 PLSALYVSKLLHE----AGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 175
+ L +++ E AG P G ++ ++ L H + + TG + K
Sbjct: 148 LKAILETVRIISEAAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAMVK-- 205
Query: 176 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES 235
AA S+ P G P + A++ +A + + F+ G C + V
Sbjct: 206 ---AAYSSGTPAIGVGPGNGPAFIERSANIPRAVKHILDSKTFDNGTICASEQSVVVERV 262
Query: 236 VYDQFVEK--------ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGA 287
+ + + + ++ + P I + + I V A
Sbjct: 263 NKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAGLTVPADA 322
Query: 288 KLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQY 347
++ E T V + ++ E P+ + + E + S Y
Sbjct: 323 RVLIAEE--------------TKVGAKIPYSR-EKLAPILAFYTAETWQEACELSMDILY 367
Query: 348 ----GLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAA-----------IPFGGYKQ 392
G + + + + V + +N + G
Sbjct: 368 HEGAGHTLIIHSEDKEIIREFALKKPVSRLLVNTPGALGGIGATTNLVPALTLGCGAVGG 427
Query: 393 SGQGREKGSYSLSNYLQVKAVVTALKNPAWL 423
S G N ++ + T + +
Sbjct: 428 SSSSDNIGPE---NLFNIRRIATGVLELEDI 455
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} Length = 486 | Back alignment and structure |
|---|
Score = 282 bits (723), Expect = 6e-91
Identities = 126/401 (31%), Positives = 196/401 (48%), Gaps = 18/401 (4%)
Query: 5 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 64
R++I+ F LL +H +E+A L T +NGK ++ A EV + AG + G
Sbjct: 66 RRARILFNFQQLLSQHKEELAHLITIENGKNTKE-ALGEVGRGIENVEFAAGAPSLMMGD 124
Query: 65 TAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 123
+ + PIGV G I P+NFP+++ W A+A GNT +LK +E+TPL
Sbjct: 125 SLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLT 184
Query: 124 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 183
+ +L +AGLP GV N+V G + H E+ ++F GS G+ V + ++ N
Sbjct: 185 EKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSE-N 242
Query: 184 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 243
LK V G K+ IV DA+++ A F + G+ C A + V E + D+F+ K
Sbjct: 243 LKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGIADEFMAK 302
Query: 244 ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-AKGYY 302
+G+ G+ GP I + ++ L YI G++ GA+L G GY+
Sbjct: 303 LQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYF 362
Query: 303 IKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTAN 362
+ PT+F V +M I KDEIF PV S+++ K+L E I+ +N S++ A +FT N +
Sbjct: 363 VGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIR 422
Query: 363 TLMRALRVGSVWINCFDVFDAAIP-------FGGYKQSGQG 396
+ G + IN +P F G+K S G
Sbjct: 423 YFRENIDAGMLGIN------LGVPAPMAFFPFSGWKSSFFG 457
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A Length = 563 | Back alignment and structure |
|---|
Score = 283 bits (726), Expect = 2e-90
Identities = 110/427 (25%), Positives = 180/427 (42%), Gaps = 24/427 (5%)
Query: 1 MTAYERSKIILRFADLLE-RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWAD 59
+R+++ L+ AD+L E+ A GK Q+ FR+ A +A
Sbjct: 119 KPMADRAQVFLKAADMLSGPRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAV 178
Query: 60 KI-QGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 118
++ + G I P+NF + G GN ++ K ++
Sbjct: 179 ELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAI-GGNLAGAPALMGNVVLWKPSDT 237
Query: 119 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 178
L++ V ++L EAGLPP ++ V GPT G + S + + FTGS T K + +
Sbjct: 238 AMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQ 297
Query: 179 AAKS-----NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVH 233
A++ + E GGK+ V ADVD + F GQ C A SR +V
Sbjct: 298 VAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVP 357
Query: 234 ESVYDQFVEKANALAMKRVVGDPFKG-GIQQGPQIDSEQFEKILKYIRSG-VDGGAKLET 291
+S++ Q + + VGDP + G ID++ F +I K++ +
Sbjct: 358 KSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILA 417
Query: 292 GGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD--LDEVIQRSNA-SQYG 348
GG+ + GYY++P + I K+EIFGPV ++ Y D E ++ ++ + YG
Sbjct: 418 GGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYG 477
Query: 349 LAAGVFTHNLDTANTLMRALR--VGSVWINCFDVFDAAI----PFGGYKQSGQGREKGSY 402
L VF + R LR G+ +IN ++ PFGG + SG + G
Sbjct: 478 LTGAVFAQDKAIVQEATRMLRNAAGNFYINDKST--GSVVGQQPFGGARASGTNDKPGGP 535
Query: 403 SLSNYLQ 409
+Y+
Sbjct: 536 ---HYIL 539
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} Length = 521 | Back alignment and structure |
|---|
Score = 273 bits (701), Expect = 3e-87
Identities = 115/405 (28%), Positives = 198/405 (48%), Gaps = 22/405 (5%)
Query: 5 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 64
R+++ ++F LL + +E+A + + ++GK + A+ ++ + + G +
Sbjct: 87 RRARVFMKFVQLLNDNMNELAEMLSREHGKTIDD-AKGDIVRGLEVCEFVIGIPHLQKSE 145
Query: 65 TAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 123
GP + ++ +P+G+ I P+NFP ++ W PA+ACGN +LK +E+ P
Sbjct: 146 FTEGAGPGIDMYSIRQPVGIGAGITPFNFPGMIPMWMFAPAIACGNAFILKPSERDPSVP 205
Query: 124 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 183
+ +++L+ EAGLP G+LN+V+G A A+ +H ++ ++F GST + V AA N
Sbjct: 206 IRLAELMIEAGLPAGILNVVNG-DKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAM-N 263
Query: 184 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRT-FVHESVYDQFVE 242
K G K+ I+ DAD+D+AA A + + G+ C A S V E ++ ++
Sbjct: 264 GKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLID 323
Query: 243 KANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL----GA 298
K + +G GP + E ++I I SG++ GAKL G
Sbjct: 324 KLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYE 383
Query: 299 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNL 358
G++I +F V DM I K EIFGPV S+++ ++ +E + +YG ++T +
Sbjct: 384 NGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDG 443
Query: 359 DTANTLMRALRVGSVWINCFDVFDAAIP-------FGGYKQSGQG 396
D A + +G V +N IP FGG+K S G
Sbjct: 444 DAARDFASRINIGMVGVN------VPIPVPLAYHSFGGWKSSSFG 482
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} PDB: 3szb_A* 1ad3_A* Length = 469 | Back alignment and structure |
|---|
Score = 252 bits (646), Expect = 1e-79
Identities = 121/432 (28%), Positives = 184/432 (42%), Gaps = 36/432 (8%)
Query: 6 RSKIILRFADLLERHNDEI-AALETWDNGKPFEQSAQTEVPMTTRLFRYY----AGWADK 60
R + + L++ E+ AL D K + EV Y WA
Sbjct: 42 RIQQLEALQRLIQEQEQELVGALAA-DLHKNEWNAYYEEVVYVLEEIEYMIQKLPEWAAD 100
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPL-LMFAWKVGPALACGNTIVLKTAEQT 119
P + EP+GV I WN+P L VG A+A GN +VLK +E +
Sbjct: 101 EPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVG-AIAAGNAVVLKPSELS 159
Query: 120 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 179
A ++ ++ + L + +++G G L D + +TGST GKI++ A
Sbjct: 160 ENMASLLATIIPQY-LDKDLYPVING-GVPETTELLKE-RFDHILYTGSTGVGKIIMTAA 216
Query: 180 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239
AK +L PVTLELGGKSP V ++ D+D A + F N GQ C A S+ +Q
Sbjct: 217 AK-HLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQ 275
Query: 240 FVEKANALAMKRVVGDPFKGGIQQGPQ----IDSEQFEKILKYIRSGVDGGAKLETGGER 295
VE +K+ + + + ++ I + F++++ I G K+ GG
Sbjct: 276 IVE-----KLKKSLKEFYGEDAKKSRDYGRIISARHFQRVMGLIE-----GQKVAYGGTG 325
Query: 296 LGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFT 355
A YI PT+ T V + ++EIFGPV I+ + L+E IQ N + LA +F+
Sbjct: 326 -DAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFS 384
Query: 356 HNLDTANTLMRALRVGSVWINCFDVF----DAAIPFGGYKQSGQGREKGSYSLSNYLQVK 411
N ++ G V N DV ++PFGG SG G G S + +
Sbjct: 385 SNDKVIKKMIAETSSGGVAAN--DVIVHITLHSLPFGGVGNSGMGSYHGKKSFETFSHRR 442
Query: 412 AVVTALKNPAWL 423
+ L P
Sbjct: 443 SC---LVRPLMN 451
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* Length = 457 | Back alignment and structure |
|---|
Score = 226 bits (577), Expect = 2e-69
Identities = 109/410 (26%), Positives = 180/410 (43%), Gaps = 28/410 (6%)
Query: 5 ERSKIILRFADLLERHNDEI-AALETWDNGKPFEQSAQTEVPMTTRLFRYY----AGWAD 59
R + + R + + + + + +AL D GKP + E+ + W
Sbjct: 51 FRKQSLERLKEAVINNKEALYSALAE-DLGKPKDVVDLAEIGAVLHEIDFALAHLDEWVA 109
Query: 60 KIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPL-LMFAWKVGPALACGNTIVLKTAEQ 118
+ + P + EP GV I P+N+P+ L +G A+ GNT ++K +E
Sbjct: 110 PVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIG-AIIGGNTCIIKPSET 168
Query: 119 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 178
TP ++ + K++ EA P + ++ G G + L S D + FTGS GK+V+Q
Sbjct: 169 TPETSAVIEKIIAEA-FAPEYVAVIQG-GRDENSHLLSL-PFDFIFFTGSPNVGKVVMQA 225
Query: 179 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 238
AAK +L PV LELGGK P IV DAD+D+ + F N GQ A +VH SV D
Sbjct: 226 AAK-HLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKD 284
Query: 239 QFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA 298
+E + V G + Q ++++ + ++ G +
Sbjct: 285 ALLE-----RLVERVKTELPEINSTGKLVTERQVQRLVSLLE---ATQGQVLVGSQA-DV 335
Query: 299 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQ-YGLAAGVFTHN 357
+ TV GV+ + + +E+FGP+ +L++ + I + N LA VF +
Sbjct: 336 SKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKD 395
Query: 358 LDTANTLMRALRVGSVWINCFDVF----DAAIPFGGYKQSGQGREKGSYS 403
+D A ++ ++ G +N V +PFGG SG G G +S
Sbjct: 396 MDVAKGIINQIQSGDAQVN--GVMLHAFSPYLPFGGIGASGMGEYHGHFS 443
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 423 | |||
| 2wme_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 3ed6_A | 520 | Betaine aldehyde dehydrogenase; structural genomic | 100.0 | |
| 3ros_A | 484 | NAD-dependent aldehyde dehydrogenase; nysgrc, PSI- | 100.0 | |
| 3ifg_A | 484 | Succinate-semialdehyde dehydrogenase (NADP+); niai | 100.0 | |
| 3rh9_A | 506 | Succinate-semialdehyde dehydrogenase (NAD(P)(+)); | 100.0 | |
| 3iwj_A | 503 | Putative aminoaldehyde dehydrogenase; rossmann fol | 100.0 | |
| 3u4j_A | 528 | NAD-dependent aldehyde dehydrogenase; PSI-biology, | 100.0 | |
| 2o2p_A | 517 | Formyltetrahydrofolate dehydrogenase; aldehyde deh | 100.0 | |
| 1bxs_A | 501 | Aldehyde dehydrogenase; retinal, class 1, tetramer | 100.0 | |
| 1o04_A | 500 | Aldehyde dehydrogenase, mitochondrial precursor; A | 100.0 | |
| 3ek1_A | 504 | Aldehyde dehydrogenase; ssgcid, oxidoreductase, st | 100.0 | |
| 4f3x_A | 498 | Putative aldehyde dehydrogenase; structural genomi | 100.0 | |
| 3b4w_A | 495 | Aldehyde dehydrogenase; RV0223C-NAD complex, struc | 100.0 | |
| 3k2w_A | 497 | Betaine-aldehyde dehydrogenase; structural genomic | 100.0 | |
| 2d4e_A | 515 | 5-carboxymethyl-2-hydroxymuconate semialdehyde deh | 100.0 | |
| 3jz4_A | 481 | Succinate-semialdehyde dehydrogenase [NADP+]; tetr | 100.0 | |
| 3qan_A | 538 | 1-pyrroline-5-carboxylate dehydrogenase 1; proline | 100.0 | |
| 1a4s_A | 503 | ALDH, betaine aldehyde dehydrogenase; oxidoreducta | 100.0 | |
| 3r31_A | 517 | BADH, betaine aldehyde dehydrogenase; structural g | 100.0 | |
| 1wnd_A | 495 | Putative betaine aldehyde dehydrogenase; NADH, flu | 100.0 | |
| 2imp_A | 479 | Lactaldehyde dehydrogenase; protein-lactate-NADH t | 100.0 | |
| 3prl_A | 505 | NADP-dependent glyceraldehyde-3-phosphate dehydro; | 100.0 | |
| 2ve5_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 3i44_A | 497 | Aldehyde dehydrogenase; oxidoreductase, structural | 100.0 | |
| 3etf_A | 462 | Putative succinate-semialdehyde dehydrogenase; cen | 100.0 | |
| 3pqa_A | 486 | Lactaldehyde dehydrogenase; structural genomics, p | 100.0 | |
| 4e4g_A | 521 | Methylmalonate-semialdehyde dehydrogenase; structu | 100.0 | |
| 2w8n_A | 487 | Succinate-semialdehyde dehydrogenase, mitochondria | 100.0 | |
| 3r64_A | 508 | NAD dependent benzaldehyde dehydrogenase; structur | 100.0 | |
| 1uxt_A | 501 | Glyceraldehyde-3-phosphate dehydrogenase (NADP+); | 100.0 | |
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate dehydrogenase; oxidoredu | 100.0 | |
| 2j6l_A | 500 | Aldehyde dehydrogenase family 7 member A1; NAD, re | 100.0 | |
| 1euh_A | 475 | NADP dependent non phosphorylating glyceraldehyde- | 100.0 | |
| 4dng_A | 485 | Uncharacterized aldehyde dehydrogenase ALDY; struc | 100.0 | |
| 3ty7_A | 478 | Putative aldehyde dehydrogenase SAV2122; structura | 100.0 | |
| 1t90_A | 486 | MMSDH, probable methylmalonate-semialdehyde dehydr | 100.0 | |
| 3sza_A | 469 | Aldehyde dehydrogenase, dimeric NADP-preferring; A | 100.0 | |
| 4h7n_A | 474 | Aldehyde dehydrogenase; structural genomics, PSI-b | 100.0 | |
| 4e3x_A | 563 | Delta-1-pyrroline-5-carboxylate dehydrogenase, mit | 100.0 | |
| 3lns_A | 457 | Benzaldehyde dehydrogenase; oxidoreductase, NADP+, | 100.0 | |
| 3ju8_A | 490 | Succinylglutamic semialdehyde dehydrogenase; alpha | 100.0 | |
| 4f9i_A | 1026 | Proline dehydrogenase/delta-1-pyrroline-5-carboxy | 100.0 | |
| 2y53_A | 534 | Aldehyde dehydrogenase (BOX pathway); oxidoreducta | 100.0 | |
| 3haz_A | 1001 | Proline dehydrogenase; proline utilization A, PUTA | 100.0 | |
| 1ez0_A | 510 | ALDH, aldehyde dehydrogenase; nucleotide binding d | 100.0 | |
| 3v4c_A | 528 | Aldehyde dehydrogenase (NADP+); structural genomic | 100.0 | |
| 3k9d_A | 464 | LMO1179 protein, aldehyde dehydrogenase; structura | 100.0 | |
| 1vlu_A | 468 | Gamma-glutamyl phosphate reductase; YOR323C, struc | 100.0 | |
| 2h5g_A | 463 | Delta 1-pyrroline-5-carboxylate synthetase; dehydr | 100.0 | |
| 4ghk_A | 444 | Gamma-glutamyl phosphate reductase; structural gen | 100.0 | |
| 1o20_A | 427 | Gamma-glutamyl phosphate reductase; TM0293, struct | 100.0 | |
| 3my7_A | 452 | Alcohol dehydrogenase/acetaldehyde dehydrogenase; | 100.0 | |
| 4gic_A | 423 | HDH, histidinol dehydrogenase; protein structure i | 97.61 | |
| 1kae_A | 434 | HDH, histidinol dehydrogenase; L-histidinol dehydr | 97.07 |
| >2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-98 Score=761.95 Aligned_cols=419 Identities=44% Similarity=0.756 Sum_probs=400.9
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
+|.++|+++|+++++.|++++++|++++++|+|||+.+++..|+..+++.++|++.+.++..+...+...+...+.+++|
T Consensus 63 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P 142 (490)
T 2wme_A 63 MTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREP 142 (490)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEETTEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCccccccCCcceeEEecc
Confidence 58899999999999999999999999999999999999987689999999999999998887766655556778899999
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 160 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v 160 (423)
+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|++.++++.|+.||+|
T Consensus 143 ~GVv~~I~PwNfP~~~~~~~~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v 222 (490)
T 2wme_A 143 LGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLI 222 (490)
T ss_dssp CSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTC
T ss_pred eeEEEEeccccCcchhhhhhHHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999888999999999999
Q ss_pred ceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHHH
Q 014515 161 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240 (423)
Q Consensus 161 ~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~f 240 (423)
|+|+||||+.+|+.+.+.++..++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++|+|
T Consensus 223 ~~I~FTGS~~~G~~i~~~~a~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f 302 (490)
T 2wme_A 223 EKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARF 302 (490)
T ss_dssp CEEEEESCHHHHHHHHHHHHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHH
T ss_pred CEEEEECChHHHHHHHHhhhccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHH
Confidence 99999999999999987665547899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC----CCCceeecEEEecCCCccc
Q 014515 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDML 316 (423)
Q Consensus 241 ~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~ 316 (423)
+++|+++++++++|+|.|+++++||+++..+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|+
T Consensus 303 ~~~l~~~~~~l~vGdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~ 382 (490)
T 2wme_A 303 EAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMT 382 (490)
T ss_dssp HHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSH
T ss_pred HHHHHHHHHhCcCCCCccccCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCCh
Confidence 999999999999999999999999999999999999999999999999999998653 3689999999999999999
Q ss_pred ccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCC
Q 014515 317 IAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQG 396 (423)
Q Consensus 317 ~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g 396 (423)
+++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||++....+.+||||+|.||+|
T Consensus 383 i~~eEiFGPVl~v~~~~~~deAi~~aN~~~yGL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PFGG~k~SG~G 462 (490)
T 2wme_A 383 IVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVG 462 (490)
T ss_dssp HHHSCCCSSEEEEEEESCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEES
T ss_pred hhhccccCCEEEEEEeCCHHHHHHHHhcCCCCCeEEEEcCCHHHHHHHHHHCCeeEEEEeCCCCCCCCCCcccccccccC
Confidence 99999999999999999999999999999999999999999999999999999999999998777888999999999999
Q ss_pred CcchHHHHHhhheeeEEEEecCC
Q 014515 397 REKGSYSLSNYLQVKAVVTALKN 419 (423)
Q Consensus 397 ~~~g~~~l~~~~~~k~v~~~~~~ 419 (423)
+++|.+||++||+.|+|++++.+
T Consensus 463 re~G~~gl~~ft~~K~v~i~~g~ 485 (490)
T 2wme_A 463 RENGLTTLAHYTRIKSVQVELGD 485 (490)
T ss_dssp CBSHHHHHHTTEEEEEEEEECSC
T ss_pred chhHHHHHHHhhceeEEEEECCC
Confidence 99999999999999999999864
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-95 Score=742.14 Aligned_cols=421 Identities=38% Similarity=0.672 Sum_probs=400.9
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCC-CCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||+.++.. |+..+++.+++++.+.++..+...+.. .+...++.++
T Consensus 91 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~ 169 (520)
T 3ed6_A 91 ETAETRGKKVRAIADKIKEHREALARLETLDTGKTLEESYA-DMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKE 169 (520)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHTTSCCEEEECCSSTTEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCeecccCCCCCccccccc
Confidence 57899999999999999999999999999999999999985 999999999999998877665544432 4567789999
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccC
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 159 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~ 159 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.+|.+++.++|+|+|++|++++++.+.++.|+.||+
T Consensus 170 P~GVV~~I~PwN~P~~~~~~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~ 249 (520)
T 3ed6_A 170 PVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKE 249 (520)
T ss_dssp ECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTT
T ss_pred CccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999988889999999999
Q ss_pred cceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHH
Q 014515 160 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239 (423)
Q Consensus 160 v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~ 239 (423)
||.|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+
T Consensus 250 vd~V~FTGS~~vG~~i~~~aa~-~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~ 328 (520)
T 3ed6_A 250 VDLVSFTGGIETGKHIMKNAAN-NVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDK 328 (520)
T ss_dssp CSEEEEESCHHHHHHHHHHHHT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHH
T ss_pred cCEEEEECCHHHHHHHHHHhhh-cCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHH
Confidence 9999999999999999999987 799999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC----CCCceeecEEEecCCCcc
Q 014515 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDM 315 (423)
Q Consensus 240 f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~ 315 (423)
|+++|+++++++++|+|.|+++++||+++..+++++++++++++++|+++++||.... ..|+|++|||+.+++++|
T Consensus 329 f~~~l~~~~~~l~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~ 408 (520)
T 3ed6_A 329 FEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSM 408 (520)
T ss_dssp HHHHHHHHHTTCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTS
T ss_pred HHHHHHHHHHhccCCCCccCCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCC
Confidence 9999999999999999999999999999999999999999999999999999998642 468999999999999999
Q ss_pred cccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCC
Q 014515 316 LIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 395 (423)
Q Consensus 316 ~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~ 395 (423)
++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++...+.+||||+|.||+
T Consensus 409 ~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~ 488 (520)
T 3ed6_A 409 RIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPYFAQAPWGGYKQSGI 488 (520)
T ss_dssp HHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESCSCCCCTTSCBCCSGGGEE
T ss_pred ccccCceeCcEEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999887788999999999999
Q ss_pred CCcchHHHHHhhheeeEEEEecC--CCCCC
Q 014515 396 GREKGSYSLSNYLQVKAVVTALK--NPAWL 423 (423)
Q Consensus 396 g~~~g~~~l~~~~~~k~v~~~~~--~~~~~ 423 (423)
|+++|.+|+++||+.|+|+++.. ...||
T Consensus 489 Gre~G~~gl~~~t~~k~v~~~~~~~~~~~~ 518 (520)
T 3ed6_A 489 GRELGKEGLEEYLVSKHILTNTNPQLVNWF 518 (520)
T ss_dssp SCBSHHHHHHTTEEEEEEEEESSCCCCCCS
T ss_pred CccchHHHHHHhhceEEEEEcCCCCccCcc
Confidence 99999999999999999999875 35676
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-95 Score=735.21 Aligned_cols=415 Identities=29% Similarity=0.465 Sum_probs=397.8
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++. .|+..+++.+++++.++++..+...+...+...+..++|
T Consensus 45 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P 123 (484)
T 3ros_A 45 EEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSESK-EEVELCVSICNYYADHGPEMLKPTKLNSDLGNAYYLKQS 123 (484)
T ss_dssp SCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHTSCEEECCTTSEEEEEEEC
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCeeccCCCceeEEEecC
Confidence 5789999999999999999999999999999999999998 499999999999999888876665443456678999999
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 160 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v 160 (423)
+|||++|+|||||+...++++++||++||+||+|||+.+|.++..|.+++.++|+|+|++|+++|++.+.++ |+.||+|
T Consensus 124 ~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~v 202 (484)
T 3ros_A 124 TGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRI 202 (484)
T ss_dssp CCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTE
T ss_pred CceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCc
Confidence 999999999999999999999999999999999999999999999999999999999999999998777888 9999999
Q ss_pred ceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHHH
Q 014515 161 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240 (423)
Q Consensus 161 ~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~f 240 (423)
|.|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|
T Consensus 203 d~I~fTGS~~~G~~i~~~aa~-~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f 281 (484)
T 3ros_A 203 QGVALTGSERGGSAVAEAAGK-NLKKSTMELGGNDAFIVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEV 281 (484)
T ss_dssp EEEEEESCHHHHHHHHHHHHH-TTCEEEEECCCCCEEEECTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHH
T ss_pred CEEEEECCHHHHHHHHHHHhc-cCCceEeecCCCCcceeCCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHH
Confidence 999999999999999999987 8999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCccccccc
Q 014515 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKD 320 (423)
Q Consensus 241 ~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~ 320 (423)
+++|+++++++++|+|.|+++++||+++..+++++.++|++++++|+++++||...+..|+|++|||+.+++++|++++|
T Consensus 282 ~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~e 361 (484)
T 3ros_A 282 LHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDK 361 (484)
T ss_dssp HHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTS
T ss_pred HHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCcCCCCCceeCCeEeecCCCCCccccc
Confidence 99999999999999999999999999999999999999999999999999999876668999999999999999999999
Q ss_pred ccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCCCcch
Q 014515 321 EIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKG 400 (423)
Q Consensus 321 E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g 400 (423)
|+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++...+.+||||+|.||+|+++|
T Consensus 362 EiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G 441 (484)
T 3ros_A 362 EVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGMTVINGRWITSGELPFGGIKKSGYGRELS 441 (484)
T ss_dssp CCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEECSCHHHHHHHHHHSCSSCCEETSCCCCCTTSCBCCSGGGEESCBSH
T ss_pred ccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCccceEEECCCCCCCCCCCcCCcCcccCCcCch
Confidence 99999999999999999999999999999999999999999999999999999999987788999999999999999999
Q ss_pred HHHHHhhheeeEEEEecC
Q 014515 401 SYSLSNYLQVKAVVTALK 418 (423)
Q Consensus 401 ~~~l~~~~~~k~v~~~~~ 418 (423)
.+|+++|++.|+|+++..
T Consensus 442 ~~gl~~ft~~K~v~~~~~ 459 (484)
T 3ros_A 442 GLGLMAFVNEHLVIDVTK 459 (484)
T ss_dssp HHHHTTTCEEEEEEECGG
T ss_pred HHHHHHhheeEEEEECCC
Confidence 999999999999998853
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-95 Score=735.98 Aligned_cols=414 Identities=39% Similarity=0.640 Sum_probs=395.6
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCC-CCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..+++. |+..+++.++|++.+.++..+...+.. .+...+++++
T Consensus 69 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~ 147 (484)
T 3ifg_A 69 KTAKERAAILRRWFDLVIANSDDLALILTTEQGKPLAEAKG-EIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKE 147 (484)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEec
Confidence 57899999999999999999999999999999999999875 999999999999998877665544432 3567889999
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccC
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 159 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~ 159 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..|.+++.++|+|+|++|+++|++.+.++.|+.||+
T Consensus 148 P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~ 227 (484)
T 3ifg_A 148 PIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPI 227 (484)
T ss_dssp ECSSEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTT
T ss_pred CCcEEEEECCCcChHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999878889999999999
Q ss_pred cceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHH
Q 014515 160 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239 (423)
Q Consensus 160 v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~ 239 (423)
||.|+||||+.+|+.|++.+++ ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+
T Consensus 228 v~~v~FTGS~~~G~~i~~~aa~-~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~ 306 (484)
T 3ifg_A 228 VRKLSFTGSTAVGRLLMAQSAP-TVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDA 306 (484)
T ss_dssp CCEEEEESCHHHHHHHHHHTGG-GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHH
T ss_pred cCEEEEECCHHHHHHHHHHhhc-cCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHH
Confidence 9999999999999999999887 789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCcccccc
Q 014515 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAK 319 (423)
Q Consensus 240 f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~ 319 (423)
|+++|+++++++++|+|.|+++++||+++..+++++++++++++++|+++++||...+..|+|++|||+.+++++|++++
T Consensus 307 f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~ 386 (484)
T 3ifg_A 307 FADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAK 386 (484)
T ss_dssp HHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEEEECTTSGGGT
T ss_pred HHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCceEcCEEEecCCCCChhhC
Confidence 99999999999999999999999999999999999999999999999999999987555799999999999999999999
Q ss_pred cccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCCCcc
Q 014515 320 DEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREK 399 (423)
Q Consensus 320 ~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~ 399 (423)
||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+.....+.+||||+|+||+|+++
T Consensus 387 eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~Gr~~ 466 (484)
T 3ifg_A 387 EETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLGREG 466 (484)
T ss_dssp SCCCSSEEEEEEECCHHHHHHHHHCSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCBCCEETTEECCBS
T ss_pred CeeeCcEEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcCcCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999997777889999999999999999
Q ss_pred hHHHHHhhheeeEEEEe
Q 014515 400 GSYSLSNYLQVKAVVTA 416 (423)
Q Consensus 400 g~~~l~~~~~~k~v~~~ 416 (423)
|.+|+++||+.|+|++.
T Consensus 467 g~~gl~~~~~~k~v~~~ 483 (484)
T 3ifg_A 467 SHYGIDDYVVIKYLCVA 483 (484)
T ss_dssp TTTTTGGGEEEEEEEEE
T ss_pred hHHHHHHhhceEEEEEe
Confidence 99999999999999864
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-94 Score=735.52 Aligned_cols=415 Identities=34% Similarity=0.574 Sum_probs=397.4
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEee-c
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLH-E 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 79 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++. .|+..+++.+++++.++++..+...+...+...++.+ +
T Consensus 68 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (506)
T 3rh9_A 68 WPIETRRKWLEDIRDGLKENREEIGRILCMEHGKPWKEAQ-GEVDYAAGFFDYCAKHISALDSHTIPEKPKDCTWTVHYR 146 (506)
T ss_dssp CCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGGCCEECSCCGGGCEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCceeeEeecc
Confidence 5789999999999999999999999999999999999998 5999999999999999888776655443456678889 9
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccC
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 159 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~ 159 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..|++++.++|+|+|++|+++|++.+.++.|+.||+
T Consensus 147 P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~ 226 (506)
T 3rh9_A 147 PVGVTGLIVPWNFPIGMIAKKLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKD 226 (506)
T ss_dssp ECCSEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTT
T ss_pred cceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999988889999999999
Q ss_pred cceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHH
Q 014515 160 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239 (423)
Q Consensus 160 v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~ 239 (423)
||.|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+
T Consensus 227 vd~I~FTGS~~vG~~i~~~aa~-~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~ 305 (506)
T 3rh9_A 227 VPMLSFTGSTEVGRKLIVDTAE-QVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADA 305 (506)
T ss_dssp CCEEEEESCHHHHHHHHHHTTT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHH
T ss_pred CCEEEEECCHHHHHHHHHHhhh-cCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHH
Confidence 9999999999999999999887 799999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCC-CCceeecEEEecCCCccccc
Q 014515 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA-KGYYIKPTVFTGVKDDMLIA 318 (423)
Q Consensus 240 f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~-~g~~~~Ptvl~~~~~~~~~~ 318 (423)
|+++|+++++++++|+|.|+++++||+++.++++++.+++++++++|+++++||...+. .|+|++|||+.+++++|+++
T Consensus 306 f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~ 385 (506)
T 3rh9_A 306 FGQKLAERVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCY 385 (506)
T ss_dssp HHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHH
T ss_pred HHHHHHHHHHhccCCCCcccCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhh
Confidence 99999999999999999999999999999999999999999999999999999986444 78999999999999999999
Q ss_pred ccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCCCc
Q 014515 319 KDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGRE 398 (423)
Q Consensus 319 ~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~ 398 (423)
+||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++....+.+||||+|+||+|++
T Consensus 386 ~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~ 465 (506)
T 3rh9_A 386 QEETFGPLVPMALFRTEEEVIDAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTGPTPEAPFGGMKASGIGRE 465 (506)
T ss_dssp HSCCCSSEEEEEEECCHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCCSEEEESCCCCCCTTSCBCCSGGGEESCB
T ss_pred cccccCcEEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCccCcCcCcCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999888888999999999999999
Q ss_pred chHHHHHhhheeeEEEEec
Q 014515 399 KGSYSLSNYLQVKAVVTAL 417 (423)
Q Consensus 399 ~g~~~l~~~~~~k~v~~~~ 417 (423)
+|++|+++||+.|+|+++.
T Consensus 466 ~G~~gl~~ft~~K~v~~~~ 484 (506)
T 3rh9_A 466 GGLEGLFEFVEAQTVPRGF 484 (506)
T ss_dssp SHHHHHTTTEEEEEEEEC-
T ss_pred ccHHHHHHhcceEEEEEcC
Confidence 9999999999999998874
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-94 Score=734.15 Aligned_cols=421 Identities=41% Similarity=0.741 Sum_probs=398.5
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccC---C-CCCCCceeE
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA---P-ADGPYHVQT 76 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~---~-~~~~~~~~~ 76 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++.. |+..+++.+++++.++++..+... + ...+...++
T Consensus 69 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (503)
T 3iwj_A 69 ASGAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDEAAW-DIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHV 147 (503)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceE
Confidence 47899999999999999999999999999999999999875 999999999999998876654331 1 113457889
Q ss_pred eeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhc
Q 014515 77 LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALAS 156 (423)
Q Consensus 77 ~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~ 156 (423)
.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++++++|++.+.++.|+.
T Consensus 148 ~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~ 227 (503)
T 3iwj_A 148 LREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLAT 227 (503)
T ss_dssp EEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHT
T ss_pred EEcCCceEEEECCCchHHHHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988889999999
Q ss_pred ccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCcc
Q 014515 157 HMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 236 (423)
Q Consensus 157 ~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~ 236 (423)
||++|+|+||||+.+|+.|++.++. +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++
T Consensus 228 ~~~v~~I~FTGS~~~G~~i~~~aa~-~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i 306 (503)
T 3iwj_A 228 HPDVDKVAFTGSSATGSKIMTAAAQ-LVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESI 306 (503)
T ss_dssp CTTCCEEEEESCHHHHHHHHHHHGG-GTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTT
T ss_pred CCCccEEEEECcHHHHHHHHHHHhc-CCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHH
Confidence 9999999999999999999999887 789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC--CCCceeecEEEecCCCc
Q 014515 237 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDD 314 (423)
Q Consensus 237 ~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~--~~g~~~~Ptvl~~~~~~ 314 (423)
+|+|+++|+++++++++|+|.++++++||+++..+++++.+++++++++|+++++||...+ ..|+|++|||+.+++++
T Consensus 307 ~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~ 386 (503)
T 3iwj_A 307 ATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTN 386 (503)
T ss_dssp HHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTT
T ss_pred HHHHHHHHHHHHHhccCCCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCC
Confidence 9999999999999999999999999999999999999999999999999999999998654 57899999999999999
Q ss_pred ccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCC
Q 014515 315 MLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSG 394 (423)
Q Consensus 315 ~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG 394 (423)
|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++...+.+||||+|.||
T Consensus 387 ~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG 466 (503)
T 3iwj_A 387 MQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRSG 466 (503)
T ss_dssp SHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSSCCCCTTSCBCCSGGGE
T ss_pred chhhCceeeCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999987778899999999999
Q ss_pred CCCcchHHHHHhhheeeEEEEecC--CCCCC
Q 014515 395 QGREKGSYSLSNYLQVKAVVTALK--NPAWL 423 (423)
Q Consensus 395 ~g~~~g~~~l~~~~~~k~v~~~~~--~~~~~ 423 (423)
+|+++|.+|+++|++.|+|+++.. ...||
T Consensus 467 ~G~~~G~~g~~~f~~~k~v~~~~~~~~~~~~ 497 (503)
T 3iwj_A 467 FGRELGEWGLDNYLSVKQVTQYISEEPWGWY 497 (503)
T ss_dssp ECCBSHHHHHHTTEEEEEEEEECCSSCCCCS
T ss_pred CCCcchHHHHHHhhCeEEEEEeCCCCccccc
Confidence 999999999999999999998764 35576
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-94 Score=736.76 Aligned_cols=421 Identities=41% Similarity=0.713 Sum_probs=400.4
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCC-CCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++. .|+..+++.+++++.++++..+...+.. .+...++.++
T Consensus 82 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (528)
T 3u4j_A 82 MSGAERSRLMFKVADLILARQEELALIESLEVGKPIAQAR-GEIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLRE 160 (528)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEEECCSCTTEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCeeeccCCCCceeEEEec
Confidence 5789999999999999999999999999999999999995 5999999999999999877765554433 4567899999
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccC
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 159 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~ 159 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..|.+++.++|+|+|++|+++|.+.+.++.|+.||+
T Consensus 161 P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~ 240 (528)
T 3u4j_A 161 PVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPN 240 (528)
T ss_dssp ECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTT
T ss_pred cceEEEEECCCccHHHHHHHHHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999988889999999999
Q ss_pred cceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHH
Q 014515 160 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239 (423)
Q Consensus 160 v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~ 239 (423)
||.|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+
T Consensus 241 vd~I~FTGS~~~G~~i~~~aa~-~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~ 319 (528)
T 3u4j_A 241 VDMVAFTGSVRVGTKLGEIAAR-TVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDA 319 (528)
T ss_dssp CCEEEEESCHHHHHHHHHHHHT-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHH
T ss_pred cCEEEEeCCHHHHHHHHHHHHh-cCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHH
Confidence 9999999999999999999887 899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCC-CCceeecEEEecCCCccccc
Q 014515 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA-KGYYIKPTVFTGVKDDMLIA 318 (423)
Q Consensus 240 f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~-~g~~~~Ptvl~~~~~~~~~~ 318 (423)
|+++|+++++++++|+|.|+++++||+++.++++++.+++++++++|+++++||...+. .|+|++|||+.+++++|+++
T Consensus 320 f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~ 399 (528)
T 3u4j_A 320 LMERLLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIA 399 (528)
T ss_dssp HHHHHHHHHHHCCEECTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHH
T ss_pred HHHHHHHHHHhhcCCCCCCcCCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecceEEecCCCCCccc
Confidence 99999999999999999999999999999999999999999999999999999987544 78999999999999999999
Q ss_pred ccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCCCc
Q 014515 319 KDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGRE 398 (423)
Q Consensus 319 ~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~ 398 (423)
+||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++...+.+||||+|.||+|++
T Consensus 400 ~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~ 479 (528)
T 3u4j_A 400 REEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVIDGTPELPIGGYKKSGLGRE 479 (528)
T ss_dssp HSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCB
T ss_pred cceeeccEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCcCCcCcCCCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999888889999999999999999
Q ss_pred chHHHHHhhheeeEEEEecC-CCCCC
Q 014515 399 KGSYSLSNYLQVKAVVTALK-NPAWL 423 (423)
Q Consensus 399 ~g~~~l~~~~~~k~v~~~~~-~~~~~ 423 (423)
+|.+|+++|++.|+|+++.. ..+||
T Consensus 480 ~G~~gl~~ft~~K~v~~~~~~~~~~~ 505 (528)
T 3u4j_A 480 LGRYGFDEYSQFKGVHVTLGRPAPWF 505 (528)
T ss_dssp STTHHHHHTEEEEEEEEESSCCCCSC
T ss_pred chHHHHHHhhceEEEEEeCCCCCCcc
Confidence 99999999999999998863 34455
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-94 Score=735.94 Aligned_cols=415 Identities=43% Similarity=0.803 Sum_probs=394.3
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCC----CCCCceeE
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA----DGPYHVQT 76 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~ 76 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||+.++...|+..+++.+++++.++++..+...+. ..+...+.
T Consensus 95 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~ 174 (517)
T 2o2p_A 95 INARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLT 174 (517)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEE
Confidence 57899999999999999999999999999999999999874599999999999999887766554332 22235689
Q ss_pred eeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhc
Q 014515 77 LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALAS 156 (423)
Q Consensus 77 ~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~ 156 (423)
.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+++|.+.+.++.|+.
T Consensus 175 ~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~ 254 (517)
T 2o2p_A 175 KKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSD 254 (517)
T ss_dssp EEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHH
T ss_pred EecCCccEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999987889999999
Q ss_pred ccCcceEeeecCchHHHHHHHHHh-hCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCc
Q 014515 157 HMEVDKLAFTGSTTTGKIVLQLAA-KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES 235 (423)
Q Consensus 157 ~~~v~~v~~tGs~~~~~~v~~~~a-~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~ 235 (423)
||+||+|+||||+.+|+.|++.++ + ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++
T Consensus 255 ~~~v~~V~FTGS~~~G~~I~~~aa~~-~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~ 333 (517)
T 2o2p_A 255 HPDVRKIGFTGSTEVGKHIMKSCALS-NVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEES 333 (517)
T ss_dssp CTTCCEEEEESCHHHHHHHHHHHHHH-TCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHH
T ss_pred CCCCCEEEEECCHHHHHHHHHHhHHh-cCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHH
Confidence 999999999999999999999988 6 89999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCcc
Q 014515 236 VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDM 315 (423)
Q Consensus 236 ~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~ 315 (423)
++|+|+++|+++++++++|+|.|+++++||+++..+++++.+++++++++|+++++||...+..|+|++|||+.+++++|
T Consensus 334 i~d~f~~~l~~~~~~~~vGdp~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~ 413 (517)
T 2o2p_A 334 IHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHM 413 (517)
T ss_dssp HHHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTS
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999998654468999999999999999
Q ss_pred cccccccccCeeEEEecCC--HHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCC
Q 014515 316 LIAKDEIFGPVQSILKYKD--LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQS 393 (423)
Q Consensus 316 ~~~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~S 393 (423)
++++||+||||++|++|+| +||||+++|+++|||++||||+|.++++++++++++|+|+||+++...+.+||||+|.|
T Consensus 414 ~i~~eEiFGPVl~v~~~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~S 493 (517)
T 2o2p_A 414 YIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQS 493 (517)
T ss_dssp GGGTSCCCSSEEEEEEECTTCSHHHHHHHTCSSCCSCCEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCCGGG
T ss_pred hhhhccccccEEEEEEcCCCCHHHHHHHHhcCCCCceEEEeCCCHHHHHHHHHhcCEeEEEECCCCCCCCCCCcCCcCcC
Confidence 9999999999999999999 99999999999999999999999999999999999999999998777789999999999
Q ss_pred CCCCcchHHHHHhhheeeEEEEe
Q 014515 394 GQGREKGSYSLSNYLQVKAVVTA 416 (423)
Q Consensus 394 G~g~~~g~~~l~~~~~~k~v~~~ 416 (423)
|+|+++|.+++++|++.|+|+++
T Consensus 494 G~Gr~~G~~~l~~~~~~k~v~~~ 516 (517)
T 2o2p_A 494 GFGKDLGEAALNEYLRIKTVTFE 516 (517)
T ss_dssp EECCBSHHHHHHTTEEEEEEEEE
T ss_pred CcCccChHHHHHHhCCceEEEee
Confidence 99999999999999999999875
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-94 Score=731.28 Aligned_cols=418 Identities=57% Similarity=0.990 Sum_probs=396.6
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||+.++...|+..+++.+++++.++++..+...+...+...+..++|
T Consensus 80 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P 159 (501)
T 1bxs_A 80 MDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEP 159 (501)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECCSSSEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeeccCCcceeEEecC
Confidence 57899999999999999999999999999999999998766799999999999999887776554333334567899999
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 160 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v 160 (423)
+|||++|+|||||+...++++++||++||+||+|||+.+|.++..|.+++.++|+|+|++|+++|.+.+.++.|+.||+|
T Consensus 160 ~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v 239 (501)
T 1bxs_A 160 VGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDV 239 (501)
T ss_dssp CCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTC
T ss_pred CceEEEECCCcchHHHHHHHHHHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999888899999999999
Q ss_pred ceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHHH
Q 014515 161 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240 (423)
Q Consensus 161 ~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~f 240 (423)
|+|+||||+.+|+.|++.+++.+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|
T Consensus 240 ~~I~FTGS~~~G~~i~~~aa~~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f 319 (501)
T 1bxs_A 240 DKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEF 319 (501)
T ss_dssp SEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHH
T ss_pred CEEEEECCHHHHHHHHHHhhhccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHH
Confidence 99999999999999999998238999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCccccccc
Q 014515 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKD 320 (423)
Q Consensus 241 ~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~ 320 (423)
+++|+++++++++|+|.|+++++||+++..+++++.++|++++++|+++++||...+..|+|++|||+.+++++|++++|
T Consensus 320 ~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~e 399 (501)
T 1bxs_A 320 VRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKE 399 (501)
T ss_dssp HHHHHHHHTCCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHS
T ss_pred HHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhc
Confidence 99999999999999999999999999999999999999999999999999999865446899999999999999999999
Q ss_pred ccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCCCcch
Q 014515 321 EIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKG 400 (423)
Q Consensus 321 E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g 400 (423)
|+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++...+.+||||+|.||+|+++|
T Consensus 400 EiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~pfGG~k~SG~G~~~G 479 (501)
T 1bxs_A 400 EIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELG 479 (501)
T ss_dssp CCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCCCTTSCBCCSGGGEESCBSH
T ss_pred ccccceEEEEEeCCHHHHHHHHhcCCCCeeEEEEcCCHHHHHHHHHhcCeeEEEECCCCCCCCCCCCCCcCcCCcCccch
Confidence 99999999999999999999999999999999999999999999999999999999987777899999999999999999
Q ss_pred HHHHHhhheeeEEEEecC
Q 014515 401 SYSLSNYLQVKAVVTALK 418 (423)
Q Consensus 401 ~~~l~~~~~~k~v~~~~~ 418 (423)
.+|+++|++.|+|+++..
T Consensus 480 ~~~l~~f~~~K~v~~~~~ 497 (501)
T 1bxs_A 480 EYGFHEYTEVKTVTIKIS 497 (501)
T ss_dssp HHHHHTTEEEEEEEEECS
T ss_pred HHHHHHhhCeeEEEEccC
Confidence 999999999999988754
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-94 Score=731.56 Aligned_cols=418 Identities=60% Similarity=1.014 Sum_probs=396.0
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||+.++...|+..+++.+++++.++++..+...+...+...+..++|
T Consensus 79 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P 158 (500)
T 1o04_A 79 MDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEP 158 (500)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECCSSSEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcceecCCCceEEEEEec
Confidence 57899999999999999999999999999999999998766699999999999999887765544333334567899999
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 160 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v 160 (423)
+|||++|+|||||+...++++++||++||+||+|||+.+|.++..|.+++.++|+|+|++|+++|.+.+.++.|+.||+|
T Consensus 159 ~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v 238 (500)
T 1o04_A 159 VGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDV 238 (500)
T ss_dssp CCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTC
T ss_pred CCcEEEECCCCchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999778899999999999
Q ss_pred ceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHHH
Q 014515 161 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240 (423)
Q Consensus 161 ~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~f 240 (423)
|+|+||||+.+|+.|++.++..++||+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|
T Consensus 239 ~~I~FTGS~~~G~~i~~~aa~~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f 318 (500)
T 1o04_A 239 DKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEF 318 (500)
T ss_dssp CEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHH
T ss_pred CEEEEECCHHHHHHHHHhhhhhcCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHH
Confidence 99999999999999999998238999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCccccccc
Q 014515 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKD 320 (423)
Q Consensus 241 ~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~ 320 (423)
+++|+++++++++|+|.|+++++||+++..+++++.+++++++++|+++++||...+..|+|++|||+.+++++|++++|
T Consensus 319 ~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~e 398 (500)
T 1o04_A 319 VERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKE 398 (500)
T ss_dssp HHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHS
T ss_pred HHHHHHHHHhCcCCCcccccCccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhC
Confidence 99999999999999999999999999999999999999999999999999999764446899999999999999999999
Q ss_pred ccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCCCcch
Q 014515 321 EIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKG 400 (423)
Q Consensus 321 E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g 400 (423)
|+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++...+.+||||+|.||+|+++|
T Consensus 399 EiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G~~~G 478 (500)
T 1o04_A 399 EIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELG 478 (500)
T ss_dssp CCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCSGGGEESCBST
T ss_pred cccceEEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCCccch
Confidence 99999999999999999999999999999999999999999999999999999999987777899999999999999999
Q ss_pred HHHHHhhheeeEEEEecC
Q 014515 401 SYSLSNYLQVKAVVTALK 418 (423)
Q Consensus 401 ~~~l~~~~~~k~v~~~~~ 418 (423)
.+|+++|++.|+|+++..
T Consensus 479 ~~gl~~f~~~K~v~~~~~ 496 (500)
T 1o04_A 479 EYGLQAYTEVKTVTVKVP 496 (500)
T ss_dssp GGGGGGGEEEEEEEEECS
T ss_pred HHHHHHhcceEEEEEecC
Confidence 999999999999988753
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-94 Score=731.91 Aligned_cols=413 Identities=39% Similarity=0.652 Sum_probs=394.7
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCC-CCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..+++. |+..+++.+++++.+.++..+...+.. .+...++.++
T Consensus 89 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~ 167 (504)
T 3ek1_A 89 KTAKERAGILRKWFDLIIANADDIALIMTSEQGKPLAEARG-EVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQ 167 (504)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccccccccceeecc
Confidence 57899999999999999999999999999999999999876 999999999999998877665543322 3467889999
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccC
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 159 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~ 159 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..|.+++.++|+|+|++|++++.+.+.++.|+.||+
T Consensus 168 P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~ 247 (504)
T 3ek1_A 168 PVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDT 247 (504)
T ss_dssp ECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTT
T ss_pred CceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999888889999999999
Q ss_pred cceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHH
Q 014515 160 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239 (423)
Q Consensus 160 v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~ 239 (423)
||.|+||||+.+|+.|++.+++ ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+
T Consensus 248 v~~V~FTGS~~~G~~i~~~aa~-~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~ 326 (504)
T 3ek1_A 248 VRKLSFTGSTEVGRLLMAQCAP-TIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDK 326 (504)
T ss_dssp CCEEEEESCHHHHHHHHHHHGG-GTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHH
T ss_pred cCEEEEECCHHHHHHHHHhhhh-hcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHH
Confidence 9999999999999999999987 789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCcccccc
Q 014515 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAK 319 (423)
Q Consensus 240 f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~ 319 (423)
|+++|+++++++++|+|.|+++++||+++..+++++++++++++++|+++++||.. ..|+|++|||+.+++++|++++
T Consensus 327 f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~--~~g~~~~PTvl~~v~~~~~i~~ 404 (504)
T 3ek1_A 327 FAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKE--LGGLFFEPGILTGVTSDMLVAK 404 (504)
T ss_dssp HHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE--EETTEECCEEEEEECTTSGGGT
T ss_pred HHHHHHHHHhhcccCCCccccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcc--CCCceECCeEEecCCCcChhhc
Confidence 99999999999999999999999999999999999999999999999999999976 3689999999999999999999
Q ss_pred cccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCCCcc
Q 014515 320 DEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREK 399 (423)
Q Consensus 320 ~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~ 399 (423)
||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+.....+.+||||+|+||+|+++
T Consensus 405 eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~ 484 (504)
T 3ek1_A 405 EETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGLISNEVAPFGGVKQSGLGREG 484 (504)
T ss_dssp SCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHSCCSEEEESCSCCCCSSSCBCCSGGGEESCBS
T ss_pred ccccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcCcCcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999998777789999999999999999
Q ss_pred hHHHHHhhheeeEEEEec
Q 014515 400 GSYSLSNYLQVKAVVTAL 417 (423)
Q Consensus 400 g~~~l~~~~~~k~v~~~~ 417 (423)
|.+|+++|++.|+|++++
T Consensus 485 G~~gl~~~t~~K~v~~~~ 502 (504)
T 3ek1_A 485 SKYGIEEYLETKYICSAY 502 (504)
T ss_dssp TTTSGGGGEEEEEEEEEC
T ss_pred cHHHHHHhhceEEEEEec
Confidence 999999999999998864
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-94 Score=730.67 Aligned_cols=415 Identities=34% Similarity=0.625 Sum_probs=396.1
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCC-CCCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++...|+..+++.+++++.++++..+...+. ..+...++.++
T Consensus 81 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (498)
T 4f3x_A 81 TTPAERSNALLKIADAIEKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRD 160 (498)
T ss_dssp CCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCcccccceEEEc
Confidence 57899999999999999999999999999999999999834699999999999999887766554332 23567889999
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccC
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 159 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~ 159 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++ +|+|++|+++|++.+.++.|+.||+
T Consensus 161 P~GVv~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ea-lP~gv~nvv~g~~~~~g~~L~~~p~ 239 (498)
T 4f3x_A 161 PIGIVGSIAPWNYPLMMMAWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPK 239 (498)
T ss_dssp ECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTT-SCTTSEEECCCCTTTHHHHHHTCTT
T ss_pred CcceEEEECCCchHHHHHHHHHHHHHHcCCeEEEECCcccHHHHHHHHHHHHHh-CCcCeEEEEeCCchHHHHHHHhCCC
Confidence 999999999999999999999999999999999999999999999999999999 9999999999988889999999999
Q ss_pred cceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHH
Q 014515 160 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239 (423)
Q Consensus 160 v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~ 239 (423)
||.|+||||+.+|+.|++.+++ ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+
T Consensus 240 v~~V~FTGS~~~G~~i~~~aa~-~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~ 318 (498)
T 4f3x_A 240 VGMVSITGDIATGKKVLAAAAK-TVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEK 318 (498)
T ss_dssp CCEEEEESCHHHHHHHHHHHHT-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHH
T ss_pred cCEEEEECCHHHHHHHHHHHHh-hCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHH
Confidence 9999999999999999999987 899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCC-EEEeCCcccCCCCceeecEEEecCCCccccc
Q 014515 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGA-KLETGGERLGAKGYYIKPTVFTGVKDDMLIA 318 (423)
Q Consensus 240 f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga-~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~ 318 (423)
|+++|+++++++++|+|.|+++++||+++..+++++.+++++++++|+ ++++||...+..|+|++|||+.+++++|+++
T Consensus 319 f~~~l~~~~~~~~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~ 398 (498)
T 4f3x_A 319 LVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIV 398 (498)
T ss_dssp HHHHHHHHHTTCCCSCSSGGGCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHH
T ss_pred HHHHHHHHHHhcccCCCccccCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCCCCCcEECCEEeecCCCCChhh
Confidence 999999999999999999999999999999999999999999999999 9999998765689999999999999999999
Q ss_pred ccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCCCc
Q 014515 319 KDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGRE 398 (423)
Q Consensus 319 ~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~ 398 (423)
+||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++...+.+||||+|.||+|++
T Consensus 399 ~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~ 478 (498)
T 4f3x_A 399 RREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKDISKAMRAASRLQYGCTWINTHFMLTNEMPHGGIKQSGYGKD 478 (498)
T ss_dssp HSCCCSSEEEEEEECTTSCHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSCBCCSGGGEECCB
T ss_pred CCceeCcEEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcCCcCcc
Confidence 99999999999999999999999999999999999999999999999999999999999887779999999999999999
Q ss_pred chHHHHHhhheeeEEEEec
Q 014515 399 KGSYSLSNYLQVKAVVTAL 417 (423)
Q Consensus 399 ~g~~~l~~~~~~k~v~~~~ 417 (423)
+|.+|+++|++.|+|+++.
T Consensus 479 ~G~~~l~~~t~~k~v~~~~ 497 (498)
T 4f3x_A 479 MSVYALEDYTAVRHIMINH 497 (498)
T ss_dssp SHHHHHHHTEEEEEEEEEC
T ss_pred chHHHHHHhhceEEEEEeC
Confidence 9999999999999998763
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-93 Score=728.20 Aligned_cols=414 Identities=37% Similarity=0.607 Sum_probs=393.7
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
+|.++|.++|+++++.|++++++|++++++|+|||..++...|+..+++.+++++.++++..+...+...+...+..++|
T Consensus 67 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P 146 (495)
T 3b4w_A 67 TPPHERAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTGSYGQSIVSREP 146 (495)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEEEEEETTEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCceEEEEEcc
Confidence 57899999999999999999999999999999999999874599999999999999887776654332233467899999
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 160 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v 160 (423)
+|||++|+|||||+...++++++||++||+||+|||+.+|.++..|.+++.++|+|+|++++++| +.+.++.|++||+|
T Consensus 147 ~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g-~~~~g~~L~~~~~v 225 (495)
T 3b4w_A 147 VGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDI 225 (495)
T ss_dssp CCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCB-SHHHHHHHTTCTTC
T ss_pred CceEEEECCCcchHHHHHHHHHHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeC-CHHHHHHHHhCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999 88899999999999
Q ss_pred ceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHHH
Q 014515 161 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240 (423)
Q Consensus 161 ~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~f 240 (423)
|.|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|
T Consensus 226 ~~I~FTGS~~~G~~i~~~aa~-~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f 304 (495)
T 3b4w_A 226 DMFTFTGSSAVGREVGRRAAE-MLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEI 304 (495)
T ss_dssp CEEEEESCHHHHHHHHHHHHH-TTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHH
T ss_pred CEEEEeCCHHHHHHHHHHhhh-cCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHH
Confidence 999999999999999999987 7899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC--CCCceeecEEEecCCCccccc
Q 014515 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIA 318 (423)
Q Consensus 241 ~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~ 318 (423)
+++|+++++++++|+|.|+++++||+++..+++++.+++++++++|+++++||.... ..|+|++|||+.+++++|+++
T Consensus 305 ~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~ 384 (495)
T 3b4w_A 305 VAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIA 384 (495)
T ss_dssp HHHHHHHHHHSCBCCTTCTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHH
T ss_pred HHHHHHHHHhcCCCCCccCCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCCCCCChhh
Confidence 999999999999999999999999999999999999999999999999999997643 368999999999999999999
Q ss_pred ccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCCCc
Q 014515 319 KDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGRE 398 (423)
Q Consensus 319 ~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~ 398 (423)
+||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++ ..+.+||||+|.||+|++
T Consensus 385 ~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~-~~~~~PfGG~k~SG~Gr~ 463 (495)
T 3b4w_A 385 QEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWYA-FDPGSPFGGYKNSGIGRE 463 (495)
T ss_dssp HSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCCEEECSCHHHHHHHHHHSCCSCCEESSCC-CCTTSCBCCSGGGEESCB
T ss_pred hcccccceEEEEecCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCEeEEEECCCC-CCCCCCCCCCCCCCcCcc
Confidence 9999999999999999999999999999999999999999999999999999999999987 778999999999999999
Q ss_pred chHHHHHhhheeeEEEEec
Q 014515 399 KGSYSLSNYLQVKAVVTAL 417 (423)
Q Consensus 399 ~g~~~l~~~~~~k~v~~~~ 417 (423)
+|.+|+++|++.|+|+++.
T Consensus 464 ~G~~gl~~~~~~k~v~~~~ 482 (495)
T 3b4w_A 464 NGPEGVEHFTQQKSVLLPM 482 (495)
T ss_dssp SHHHHHHTTEEEEEEECCT
T ss_pred chHHHHHHhcceeEEEEcc
Confidence 9999999999999998875
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-93 Score=728.93 Aligned_cols=417 Identities=35% Similarity=0.577 Sum_probs=395.0
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCC-CCCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++.. |+..+++.+++++.++++..+...+. ..+...+..++
T Consensus 69 ~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (497)
T 3k2w_A 69 LTARTRQNMLRTFANKIRENKHILAPMLVAEQGKLLSVAEM-EVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKV 147 (497)
T ss_dssp SCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEc
Confidence 57899999999999999999999999999999999999884 99999999999999887766554332 24567889999
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccC
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 159 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~ 159 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..|.+++.++|+|+|++|+++|++.+.++.|+.||+
T Consensus 148 P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~ 227 (497)
T 3k2w_A 148 PRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPI 227 (497)
T ss_dssp ECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSS
T ss_pred CCceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999988889999999999
Q ss_pred cceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHH
Q 014515 160 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239 (423)
Q Consensus 160 v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~ 239 (423)
||.|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+
T Consensus 228 vd~I~fTGS~~~G~~i~~~aa~-~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~ 306 (497)
T 3k2w_A 228 TKMITMTGSTVAGKQIYKTSAE-YMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDE 306 (497)
T ss_dssp EEEEEEESCHHHHHHHHHHHTT-TTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHH
T ss_pred cCEEEEECcHHHHHHHHHHhhh-cCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHH
Confidence 9999999999999999999987 799999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcc--cCC--CCceeecEEEecCCCcc
Q 014515 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER--LGA--KGYYIKPTVFTGVKDDM 315 (423)
Q Consensus 240 f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~--~~~--~g~~~~Ptvl~~~~~~~ 315 (423)
|+++|+++++++++|+|.|+++++||+++..+++++.+++++++++|+++++||.. .+. .|+|++|||+.+++++|
T Consensus 307 f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~ 386 (497)
T 3k2w_A 307 FMAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDN 386 (497)
T ss_dssp HHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTS
T ss_pred HHHHHHHHHHhccCCCCCCCCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCc
Confidence 99999999999999999999999999999999999999999999999999999973 332 68999999999999999
Q ss_pred cccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCC
Q 014515 316 LIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQ 395 (423)
Q Consensus 316 ~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~ 395 (423)
++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++...+.+||||+|+||+
T Consensus 387 ~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~ 466 (497)
T 3k2w_A 387 IVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGEQHQGFHNGWKQSGF 466 (497)
T ss_dssp HHHHSCCCSSEEEEEEESCHHHHHHHHTCSSEESEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSCBCCEETSEE
T ss_pred HhhcCCccCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCcCCcCCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999888788999999999999
Q ss_pred CCcchHHHHHhhheeeEEEEecCC
Q 014515 396 GREKGSYSLSNYLQVKAVVTALKN 419 (423)
Q Consensus 396 g~~~g~~~l~~~~~~k~v~~~~~~ 419 (423)
|+++|.+|+++|++.|+|++++..
T Consensus 467 G~~~G~~gl~~ft~~k~v~~~~~~ 490 (497)
T 3k2w_A 467 GGEDGKFGLEQYLEKKTVYINEAE 490 (497)
T ss_dssp SCBSHHHHHHTTEEEEEEEEECCC
T ss_pred CccchHHHHHHhcceEEEEEEccc
Confidence 999999999999999999988753
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-92 Score=725.49 Aligned_cols=415 Identities=41% Similarity=0.713 Sum_probs=394.6
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCC-CCCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++. .|+..+++.+++++.++++..+...+. ..+...++.++
T Consensus 83 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~ 161 (515)
T 2d4e_A 83 TKAKERKRYLLRIAELIEKHADELAVMECLDAGQVLRIVR-AQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRV 161 (515)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEe
Confidence 5789999999999999999999999999999999999988 599999999999999887766654333 23456788999
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccC
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 159 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~ 159 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|++.+.++.|+.||+
T Consensus 162 P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~ 241 (515)
T 2d4e_A 162 PAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPL 241 (515)
T ss_dssp ECCCEEEECCSSSHHHHHHHHHHHHHHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTT
T ss_pred cCCceEEECCCCchhhhhhhhhhHHHHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999977789999999999
Q ss_pred cceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHH
Q 014515 160 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239 (423)
Q Consensus 160 v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~ 239 (423)
||+|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+
T Consensus 242 vd~I~FTGS~~~G~~I~~~aa~-~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~ 320 (515)
T 2d4e_A 242 VPLLTLTGETETGKIVMRNAAD-HLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFED 320 (515)
T ss_dssp CCEEEEESCHHHHHHHHHHHGG-GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHH
T ss_pred cCEEEEeCcHHHHHHHHHHHhh-cCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHH
Confidence 9999999999999999999987 799999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC--------CCCceeecEEEecC
Q 014515 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--------AKGYYIKPTVFTGV 311 (423)
Q Consensus 240 f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~--------~~g~~~~Ptvl~~~ 311 (423)
|+++|+++++++++|+|.|+++++||+++..+++++.++|++++++|+++++||.... ..|+|++|||+.+
T Consensus 321 f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~- 399 (515)
T 2d4e_A 321 FVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG- 399 (515)
T ss_dssp HHHHHHHHHHHCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-
T ss_pred HHHHHHHHHhhcccCCcccccCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-
Confidence 9999999999999999999999999999999999999999999999999999997643 2689999999999
Q ss_pred CCcccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCC
Q 014515 312 KDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYK 391 (423)
Q Consensus 312 ~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~ 391 (423)
+++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++...+.+||||+|
T Consensus 400 ~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k 479 (515)
T 2d4e_A 400 ENHMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNVRHLPTPFGGVK 479 (515)
T ss_dssp CTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSSCCCCTTSCBCCSG
T ss_pred CCCChhhhccccCCceEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999987777899999999
Q ss_pred CCCCCCcchHHHHHhhheeeEEEEecC
Q 014515 392 QSGQGREKGSYSLSNYLQVKAVVTALK 418 (423)
Q Consensus 392 ~SG~g~~~g~~~l~~~~~~k~v~~~~~ 418 (423)
+||+|+++|.+|+++|++.|+|++++.
T Consensus 480 ~SG~Gr~~G~~gl~~~~~~K~v~~~~~ 506 (515)
T 2d4e_A 480 GSGDRREGGTYALDFYTDLKTIALPLR 506 (515)
T ss_dssp GGBCSCBSHHHHHHHHEEEEEEEEESS
T ss_pred CCCCCccchHHHHHHhCceeEEEEcCC
Confidence 999999999999999999999988763
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-92 Score=721.85 Aligned_cols=414 Identities=38% Similarity=0.661 Sum_probs=395.0
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCC-CCCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++.. |+..+++.+++++.+..+..+...+. ..+...+.+++
T Consensus 66 ~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (481)
T 3jz4_A 66 LTAKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKG-EISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQ 144 (481)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCEEEECCSSTTEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEc
Confidence 57899999999999999999999999999999999999875 99999999999998876665544332 23567789999
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccC
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 159 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~ 159 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++++++|++.+.++.|+.||+
T Consensus 145 P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~ 224 (481)
T 3jz4_A 145 PIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPL 224 (481)
T ss_dssp ECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTT
T ss_pred CccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999988889999999999
Q ss_pred cceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHH
Q 014515 160 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239 (423)
Q Consensus 160 v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~ 239 (423)
||.|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+
T Consensus 225 v~~I~fTGS~~~g~~i~~~aa~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~ 303 (481)
T 3jz4_A 225 VRKLSFTGSTEIGRQLMEQCAK-DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDR 303 (481)
T ss_dssp EEEEEEESCHHHHHHHHHHHTT-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHH
T ss_pred cCEEEEECCHHHHHHHHHHHhh-cCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHH
Confidence 9999999999999999999887 889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCcccccc
Q 014515 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAK 319 (423)
Q Consensus 240 f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~ 319 (423)
|+++|+++++++++|+|.|+++++||+++..+++++++++++++++|+++++||...+..|+|++|||+.+++++|++++
T Consensus 304 f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~ 383 (481)
T 3jz4_A 304 FAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSK 383 (481)
T ss_dssp HHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEESCCTTSGGGT
T ss_pred HHHHHHHHHHhccCCCCccCcCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeccEEEecCCCCccccc
Confidence 99999999999999999999999999999999999999999999999999999987555689999999999999999999
Q ss_pred cccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCCCcc
Q 014515 320 DEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREK 399 (423)
Q Consensus 320 ~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~ 399 (423)
||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||++....+.+||||+|+||+|+++
T Consensus 384 eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~ 463 (481)
T 3jz4_A 384 EETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREG 463 (481)
T ss_dssp SCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCBCCSGGGEESCBS
T ss_pred ccccCceEEEEEECCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCcCCcccCcCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999998777889999999999999999
Q ss_pred hHHHHHhhheeeEEEEe
Q 014515 400 GSYSLSNYLQVKAVVTA 416 (423)
Q Consensus 400 g~~~l~~~~~~k~v~~~ 416 (423)
|.+|+++||+.|+|++.
T Consensus 464 g~~g~~~~t~~k~v~~~ 480 (481)
T 3jz4_A 464 SKYGIEDYLEIKYMCIG 480 (481)
T ss_dssp HHHHHHTTEEEEEEEEE
T ss_pred hHHHHHHhhceeEEEEe
Confidence 99999999999999875
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-92 Score=727.85 Aligned_cols=415 Identities=35% Similarity=0.567 Sum_probs=394.3
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHH-hhhhcCccCCCCCCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGW-ADKIQGLTAPADGPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|++++++|++++++|+|||..++.. |+..+++.+++++.+ .+...++..+...+...+..++
T Consensus 93 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (538)
T 3qan_A 93 VNPEERANILVKAAAIIRRRKHEFSAWLVHEAGKPWKEADA-DTAEAIDFLEYYARQMIELNRGKEILSRPGEQNRYFYT 171 (538)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHTCBCCCCCTTEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCeeecccCCcceeeecC
Confidence 57899999999999999999999999999999999999986 999999999999988 5556665554444677899999
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccC
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 159 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~ 159 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..|.+++.++|+|+|++++++|++.+.++.|+.||+
T Consensus 172 P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~ 251 (538)
T 3qan_A 172 PMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPK 251 (538)
T ss_dssp ECCEEEEECCSTTTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTT
T ss_pred CCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999988889999999999
Q ss_pred cceEeeecCchHHHHHHHHHhhCC------CCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEe
Q 014515 160 VDKLAFTGSTTTGKIVLQLAAKSN------LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVH 233 (423)
Q Consensus 160 v~~v~~tGs~~~~~~v~~~~a~~~------~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~ 233 (423)
||.|+||||+.+|+.|++.++. + ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||
T Consensus 252 v~~I~FTGS~~~G~~i~~~aa~-~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~ 330 (538)
T 3qan_A 252 TSLITFTGSKDVGVRLYERAAV-VRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIH 330 (538)
T ss_dssp EEEEEEESCHHHHHHHHHHHTS-CCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEE
T ss_pred cCEEEEECCHHHHHHHHHHhhh-ccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEe
Confidence 9999999999999999999887 5 89999999999999999999999999999999999999999999999999
Q ss_pred CccHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCC
Q 014515 234 ESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKD 313 (423)
Q Consensus 234 ~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~ 313 (423)
++++|+|+++|+++++++++|+|.|+++++||+++..+++++.++|++++++| ++++||...+..|+|++|||+.++++
T Consensus 331 ~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~~~~g~~~~PTvl~~v~~ 409 (538)
T 3qan_A 331 KDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLDP 409 (538)
T ss_dssp TTTHHHHHHHHHHHHTTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEECSSSCEECCEEEESCCT
T ss_pred hHHHHHHHHHHHHHHHhccCCCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcCCCCCceeCCeeeecCCC
Confidence 99999999999999999999999999999999999999999999999999999 99999987544799999999999999
Q ss_pred cccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEc-CcCCC-CCCCCCCCCC
Q 014515 314 DMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWIN-CFDVF-DAAIPFGGYK 391 (423)
Q Consensus 314 ~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN-~~~~~-~~~~pfgG~~ 391 (423)
+|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+|| ++... .+.+||||+|
T Consensus 410 ~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~~PfGG~k 489 (538)
T 3qan_A 410 EAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFK 489 (538)
T ss_dssp TSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCEE
T ss_pred CChhhCCCcCCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCCcCCcC
Confidence 999999999999999999999999999999999999999999999999999999999999999 55544 7889999999
Q ss_pred CCCCC-CcchHHHHHhhheeeEEEEecC
Q 014515 392 QSGQG-REKGSYSLSNYLQVKAVVTALK 418 (423)
Q Consensus 392 ~SG~g-~~~g~~~l~~~~~~k~v~~~~~ 418 (423)
.||+| +++|.+|+++|++.|+|+++..
T Consensus 490 ~SG~G~~~~G~~gl~~ft~~k~v~~~~~ 517 (538)
T 3qan_A 490 MSGTDSKAGGPDYLALHMQAKTVSEMYA 517 (538)
T ss_dssp TTBSCCCBTSTTTGGGGEEEEEEEEEC-
T ss_pred cCCCCcccccHHHHHHhhCeEEEEEecC
Confidence 99999 9999999999999999988863
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-93 Score=726.93 Aligned_cols=414 Identities=39% Similarity=0.727 Sum_probs=393.0
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||+.++.. |+..+++.+++++.++++..++..+...+...++.++|
T Consensus 77 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P 155 (503)
T 1a4s_A 77 MAGIERSRVMLEAARIIRERRDNIAKLEVINNGKTITEAEY-DIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREP 155 (503)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCEEEEECGGGCEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcccCCCCceeEEEEec
Confidence 57899999999999999999999999999999999999865 99999999999999887765543332233467889999
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 160 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v 160 (423)
+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|.+ +.++.|+.||+|
T Consensus 156 ~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~-~~g~~L~~~p~v 234 (503)
T 1a4s_A 156 LGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGA-ETGSLLCHHPNV 234 (503)
T ss_dssp CSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSH-HHHHHHHHCTTC
T ss_pred CceEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCc-hHHHHHHhCCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999977 889999999999
Q ss_pred ceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHHH
Q 014515 161 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240 (423)
Q Consensus 161 ~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~f 240 (423)
|+|+||||+.+|+.|++.+++ ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|
T Consensus 235 ~~V~FTGS~~~G~~i~~~aa~-~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f 313 (503)
T 1a4s_A 235 AKVSFTGSVPTGKKVMEMSAK-TVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQF 313 (503)
T ss_dssp CEEEEESCHHHHHHHHHHHHT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHH
T ss_pred CEEEEeCCHHHHHHHHHHhhh-cCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHH
Confidence 999999999999999999987 8999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccc--C----CCCceeecEEEecCCCc
Q 014515 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL--G----AKGYYIKPTVFTGVKDD 314 (423)
Q Consensus 241 ~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~--~----~~g~~~~Ptvl~~~~~~ 314 (423)
+++|+++++++++|+|.|+++++||+++..+++++.+++++++++|+++++||... + ..|+|++|||+.+++++
T Consensus 314 ~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~ 393 (503)
T 1a4s_A 314 LEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDD 393 (503)
T ss_dssp HHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTT
T ss_pred HHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCC
Confidence 99999999999999999999999999999999999999999999999999999764 2 35899999999999999
Q ss_pred ccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCC
Q 014515 315 MLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSG 394 (423)
Q Consensus 315 ~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG 394 (423)
|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++....+.+||||+|+||
T Consensus 394 ~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG 473 (503)
T 1a4s_A 394 MTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSG 473 (503)
T ss_dssp SHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCCCTTSCBCCSGGGE
T ss_pred CHHHhccccCceEEEEecCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHHCceeEEEECCCCCCCCCCCCCCcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999987777889999999999
Q ss_pred CCCcchHHHHHhhheeeEEEEec
Q 014515 395 QGREKGSYSLSNYLQVKAVVTAL 417 (423)
Q Consensus 395 ~g~~~g~~~l~~~~~~k~v~~~~ 417 (423)
+|+++|.+|+++|++.|+|+++.
T Consensus 474 ~G~~~G~~~l~~f~~~k~v~~~~ 496 (503)
T 1a4s_A 474 FGRENGQATVDYYSQLKTVIVEM 496 (503)
T ss_dssp ECCBSTTGGGGGSEEEEEEEECC
T ss_pred CCccchHHHHHHhcCceEEEEcc
Confidence 99999999999999999998864
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-93 Score=729.43 Aligned_cols=411 Identities=41% Similarity=0.714 Sum_probs=392.3
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhh----hcCccCCCCCCCceeE
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK----IQGLTAPADGPYHVQT 76 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~ 76 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++ |+..+++.+++++.+.++ ..+...+...+. .+.
T Consensus 71 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea---ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~~~~~-~~~ 146 (517)
T 3r31_A 71 MSPMARGRILKRAADIMRERNDALSTLETLDTGKPIQET---IVADPTSGADAFEFFGGIAPSALNGDYIPLGGDF-AYT 146 (517)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH---HHHSHHHHHHHHHHHHHHHHHHTCCCEEECSSSE-EEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHhhhccccccCcccccCCCc-ceE
Confidence 578999999999999999999999999999999999887 899999999999998877 666554433445 899
Q ss_pred eeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhc
Q 014515 77 LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALAS 156 (423)
Q Consensus 77 ~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~ 156 (423)
+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..|.+++.++|+|+|++++++| +.+.++.|+.
T Consensus 147 ~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g-~~~~g~~L~~ 225 (517)
T 3r31_A 147 KRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQG-DRDTGPLLVN 225 (517)
T ss_dssp EEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCC-CTTHHHHHHT
T ss_pred EEcCccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEEC-CHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999999999999999 7889999999
Q ss_pred ccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCcc
Q 014515 157 HMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 236 (423)
Q Consensus 157 ~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~ 236 (423)
||+||.|+||||+.+|+.|++.+++ ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++
T Consensus 226 ~p~vd~I~FTGS~~~G~~i~~~aa~-~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i 304 (517)
T 3r31_A 226 HPDVAKVSLTGSVPTGRKVAAAAAG-HLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKA 304 (517)
T ss_dssp CTTEEEEEEESCHHHHHHHHHHHHH-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGG
T ss_pred CCCcCEEeccCCHHHHHHHHHHhhc-CCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHH
Confidence 9999999999999999999999988 899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC---CCCceeecEEEecCCC
Q 014515 237 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG---AKGYYIKPTVFTGVKD 313 (423)
Q Consensus 237 ~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~---~~g~~~~Ptvl~~~~~ 313 (423)
+|+|+++|+++++++++|+|.|+++++||+++.++++++.++|++++++|+++++||...+ ..|+|++|||+.++++
T Consensus 305 ~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~ 384 (517)
T 3r31_A 305 KARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTD 384 (517)
T ss_dssp HHHHHHHHHHHHHHCCBCCTTSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECCSCCSSCCSSSBCCCCEEEEEECT
T ss_pred HHHHHHHHHHHHHhccCCCCCCcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECCccCcccCCCCceECCEEEecCCC
Confidence 9999999999999999999999999999999999999999999999999999999993122 3689999999999999
Q ss_pred cccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCC
Q 014515 314 DMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQS 393 (423)
Q Consensus 314 ~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~S 393 (423)
+|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++...+.+||||+|.|
T Consensus 385 ~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~S 464 (517)
T 3r31_A 385 DMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQS 464 (517)
T ss_dssp TSHHHHSCCSSSEEEEEEECCHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHSCCSEEEESSCCCCCTTSCBCCEETT
T ss_pred CCccccceeeccEEEEEEeCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999998888899999999999
Q ss_pred CCCCcchHHHHHhhheeeEEEEec
Q 014515 394 GQGREKGSYSLSNYLQVKAVVTAL 417 (423)
Q Consensus 394 G~g~~~g~~~l~~~~~~k~v~~~~ 417 (423)
|+|+++|++|+++|++.|+|+++.
T Consensus 465 G~Gr~~G~~gl~~ft~~K~v~~~~ 488 (517)
T 3r31_A 465 GFGRENSAAALEHYSELKTVYVST 488 (517)
T ss_dssp EECCBSTGGGGGGSEEEEEEEECC
T ss_pred CCCcCchHHHHHHhhceEEEEEcC
Confidence 999999999999999999998875
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-92 Score=722.28 Aligned_cols=413 Identities=36% Similarity=0.644 Sum_probs=391.8
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCC-CCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|++++++|++++++|+|||..++...|+..+++.+++++.++++..++..+.. .+...+..++
T Consensus 79 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~ 158 (495)
T 1wnd_A 79 TTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRD 158 (495)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEeee
Confidence 578999999999999999999999999999999999998755999999999999998877655443322 2345688999
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccC
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 159 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~ 159 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..|++++.++ +|+|++|+++|++.+.++.|++||+
T Consensus 159 P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ea-lP~gvv~vv~g~~~~~g~~L~~~p~ 237 (495)
T 1wnd_A 159 PLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPK 237 (495)
T ss_dssp ECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTT
T ss_pred cCCeEEEECCCcchHHHHHHHHHHHHHcCCeeEeeCCCCChHHHHHHHHHHHHh-CCcCeEEEEeCCCHHHHHHHHhCCC
Confidence 999999999999999999999999999999999999999999999999999999 9999999999977889999999999
Q ss_pred cceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHH
Q 014515 160 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239 (423)
Q Consensus 160 v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~ 239 (423)
||.|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+
T Consensus 238 vd~I~FTGS~~~G~~i~~~aa~-~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~ 316 (495)
T 1wnd_A 238 VRMVSLTGSIATGEHIISHTAS-SIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDT 316 (495)
T ss_dssp EEEEEEESCHHHHHHHHHHHGG-GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHH
T ss_pred cCEEEEECcHHHHHHHHHHHHh-cCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHH
Confidence 9999999999999999999987 789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCC-CEEEeCCc-ccCCCCceeecEEEecCCCcccc
Q 014515 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG-AKLETGGE-RLGAKGYYIKPTVFTGVKDDMLI 317 (423)
Q Consensus 240 f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~g-a~~~~gg~-~~~~~g~~~~Ptvl~~~~~~~~~ 317 (423)
|+++|+++++++++|+|.|+++++||+++..+++++.+++++++++| +++++||. .. ..|+|++|||+.+++++|++
T Consensus 317 f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~-~~g~~~~PTvl~~v~~~~~i 395 (495)
T 1wnd_A 317 LVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRK-GNGYYYAPTLLAGALQDDAI 395 (495)
T ss_dssp HHHHHHHHHHTCCBCCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCS-SSSCCBCCEEEECCCTTSHH
T ss_pred HHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccC-CCCCeeCCEEEeCCCCCChh
Confidence 99999999999999999999999999999999999999999999999 99999997 53 26899999999999999999
Q ss_pred cccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCCC
Q 014515 318 AKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGR 397 (423)
Q Consensus 318 ~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~ 397 (423)
++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++...+.+||||+|.||+|+
T Consensus 396 ~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr 475 (495)
T 1wnd_A 396 VQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGK 475 (495)
T ss_dssp HHSCCCSSEEEEEEECCHHHHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCCCTTSCBCCSGGGEECC
T ss_pred hhccccCceEEEEEeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCCcCcCCc
Confidence 99999999999999999999999999999999999999999999999999999999999987777899999999999999
Q ss_pred cchHHHHHhhheeeEEEEe
Q 014515 398 EKGSYSLSNYLQVKAVVTA 416 (423)
Q Consensus 398 ~~g~~~l~~~~~~k~v~~~ 416 (423)
++|.+|+++|++.|+|+++
T Consensus 476 ~~G~~gl~~f~~~k~v~~~ 494 (495)
T 1wnd_A 476 DMSLYGLEDYTVVRHVMVK 494 (495)
T ss_dssp BSHHHHHHTTEEEEEEEEE
T ss_pred cchHHHHHHhhCeEEEEec
Confidence 9999999999999999875
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-92 Score=719.94 Aligned_cols=414 Identities=34% Similarity=0.606 Sum_probs=392.6
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCC-CCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|++++++|++++++|+|||..++. .|+..+++.+++++.+.++..+...+.. .+...+..++
T Consensus 63 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (479)
T 2imp_A 63 LPAIERASWLRKISAGIRERASEISALIVEEGGKIQQLAE-VEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKR 141 (479)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTTTTCCCEEECCSSTTEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhhCCccccCCCCceeEEEEe
Confidence 5789999999999999999999999999999999999987 4999999999999988776655543322 2446789999
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccC
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 159 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~ 159 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++++++|++.+.++.|+.||+
T Consensus 142 P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~ 221 (479)
T 2imp_A 142 ALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPK 221 (479)
T ss_dssp ECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTT
T ss_pred ccceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999977778999999999
Q ss_pred cceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHH
Q 014515 160 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239 (423)
Q Consensus 160 v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~ 239 (423)
+|+|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+
T Consensus 222 v~~V~fTGS~~~g~~i~~~aa~-~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~ 300 (479)
T 2imp_A 222 VAMVSMTGSVSAGEKIMATAAK-NITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQ 300 (479)
T ss_dssp EEEEEEESCHHHHHHHHHHHHT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHH
T ss_pred cCEEEEeCCHHHHHHHHHHHhc-cCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHH
Confidence 9999999999999999999987 899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCC-CCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCccccc
Q 014515 240 FVEKANALAMKRVVGDPFK-GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIA 318 (423)
Q Consensus 240 f~~~l~~~~~~~~~g~p~~-~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~ 318 (423)
|+++|+++++++++|+|.| +++++||+++..+++++.+++++++++|+++++||...+..|+|++|||+.+++++|+++
T Consensus 301 f~~~l~~~~~~~~~g~p~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~ 380 (479)
T 2imp_A 301 FVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIM 380 (479)
T ss_dssp HHHHHHHHHHTCCBSCTTTCSSCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGG
T ss_pred HHHHHHHHHHhcccCCccccCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCceECCEEEeCCCCCCHHH
Confidence 9999999999999999999 999999999999999999999999999999999997643468999999999999999999
Q ss_pred ccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCCCc
Q 014515 319 KDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGRE 398 (423)
Q Consensus 319 ~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~ 398 (423)
+||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||++....+.+||||+|.||+|++
T Consensus 381 ~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~ 460 (479)
T 2imp_A 381 HEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGA 460 (479)
T ss_dssp GSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECCCHHHHHHHHHHCCSSEEEESSCCCCCTTSCBCCEETTEESCB
T ss_pred hCccCCceEEEEeeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCEeEEEECCCCCCCCCCCCCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999777678999999999999999
Q ss_pred chHHHHHhhheeeEEEEe
Q 014515 399 KGSYSLSNYLQVKAVVTA 416 (423)
Q Consensus 399 ~g~~~l~~~~~~k~v~~~ 416 (423)
+|.+|+++|++.|+|+++
T Consensus 461 ~g~~~l~~~~~~k~v~~~ 478 (479)
T 2imp_A 461 DGKHGLHEYLQTQVVYLQ 478 (479)
T ss_dssp SHHHHHHTTEEEEEEEEE
T ss_pred chHHHHHHhcCeeEEEec
Confidence 999999999999999764
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-93 Score=724.39 Aligned_cols=410 Identities=36% Similarity=0.515 Sum_probs=388.9
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCC--C----CCce
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD--G----PYHV 74 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~----~~~~ 74 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++.. |+..+++.+++++.+.++..+...+.. . +...
T Consensus 68 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~ 146 (505)
T 3prl_A 68 RPIHERVDLLYAWADLLEERKEIIGELIMHEVAKPKKSAIG-EVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIA 146 (505)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHHH-HHHHHHHHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccccccccCCcee
Confidence 57899999999999999999999999999999999999986 999999999999998877655433211 1 3457
Q ss_pred eEeeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHh
Q 014515 75 QTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAAL 154 (423)
Q Consensus 75 ~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l 154 (423)
++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..|.+++.++|+|+|++++++|++.+.++.|
T Consensus 147 ~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L 226 (505)
T 3prl_A 147 LVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHL 226 (505)
T ss_dssp EEEEEECSEEEEEECSSSTTHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHH
T ss_pred EEEEcCCcEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999888899999
Q ss_pred hcccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeC
Q 014515 155 ASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHE 234 (423)
Q Consensus 155 ~~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~ 234 (423)
+.||+||.|+||||+.+|+.|++.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+
T Consensus 227 ~~~p~vd~I~FTGS~~~G~~i~~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~ 303 (505)
T 3prl_A 227 VEHPGIDMITFTGGTTTGERISEKAK---MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQD 303 (505)
T ss_dssp HTCTTCCEEEEESCHHHHHHHHHHCC---SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEH
T ss_pred HhCCCCCEEEEeCCHHHHHHHHHHcc---CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeH
Confidence 99999999999999999999999876 799999999999999999999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCc
Q 014515 235 SVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDD 314 (423)
Q Consensus 235 ~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~ 314 (423)
+++|+|+++|+++++++++|+|. +++++||+++..+++++.+++++++++|+++++||.. .|+|++|||+.+++++
T Consensus 304 ~i~d~f~~~l~~~~~~~~~g~p~-~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~---~g~~~~PTvl~~v~~~ 379 (505)
T 3prl_A 304 SVADQLVANIKELVEQLTVGSPE-DDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR---QGNLLSPTLLDDVTPA 379 (505)
T ss_dssp HHHHHHHHHHHHHHHHCCBSCTT-TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTT
T ss_pred HHHHHHHHHHHHHHHhcccCCCC-CcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCceeCCeEeecCCCC
Confidence 99999999999999999999999 9999999999999999999999999999999999974 5899999999999999
Q ss_pred ccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC-CCCCCCCCCCCCC
Q 014515 315 MLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV-FDAAIPFGGYKQS 393 (423)
Q Consensus 315 ~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~pfgG~~~S 393 (423)
|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++. ..+.+||||+|.|
T Consensus 380 ~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~PFGG~k~S 459 (505)
T 3prl_A 380 MRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTERGPDHFPFLGVKKS 459 (505)
T ss_dssp SGGGTSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECSCHHHHHHHHHTSCSSEEEESSCCCSCSTTSCBCCEETT
T ss_pred ChhhcCCccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHHCCeeEEEEcCCCCCCCCCCCcCCcCcC
Confidence 999999999999999999999999999999999999999999999999999999999999999765 4578999999999
Q ss_pred CCCCcchHHHHHhhheeeEEEEecC
Q 014515 394 GQGREKGSYSLSNYLQVKAVVTALK 418 (423)
Q Consensus 394 G~g~~~g~~~l~~~~~~k~v~~~~~ 418 (423)
|+|+++|.+|+++|++.|+|+++..
T Consensus 460 G~Gr~~g~~~~~~f~~~k~v~~~~~ 484 (505)
T 3prl_A 460 GLGVQGIKPSLLSMTRERVTVLNLA 484 (505)
T ss_dssp EESCBSHHHHHHHTEEEEEEEEEC-
T ss_pred CCCcCccHHHHHHhhceEEEEEeCC
Confidence 9999999999999999999988864
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-92 Score=717.51 Aligned_cols=410 Identities=34% Similarity=0.575 Sum_probs=385.8
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEe-ec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTL-HE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 79 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..+++..|+..+++.+++++............ ..+...++. ++
T Consensus 82 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~ 160 (497)
T 3i44_A 82 TSPHERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEAL-IEGNEQAILHYD 160 (497)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEES-STTCSSCEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhcccccccc-cCCceeEEEeec
Confidence 5789999999999999999999999999999999999998559999999999998876554332211 123446777 99
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccC
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 159 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~ 159 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..|.+++.++|+|+|++|+++|++.+.++.|+.||+
T Consensus 161 P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~ 240 (497)
T 3i44_A 161 AIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPD 240 (497)
T ss_dssp ECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTT
T ss_pred CceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999988889999999999
Q ss_pred cceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHH
Q 014515 160 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239 (423)
Q Consensus 160 v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~ 239 (423)
||.|+||||+.+|+.|++.+++ ++||+++|+|||||+||++||| +.|++.+++++|.|+||.|+++++||||++++|+
T Consensus 241 v~~I~FTGS~~~G~~i~~~aa~-~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~ 318 (497)
T 3i44_A 241 LEMISFTGSTRAGKDISKNASN-TLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDK 318 (497)
T ss_dssp CCEEEEESCHHHHHHHHHHHHT-TTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHH
T ss_pred cCEEEEeCcHHHHHHHHHHHhh-cCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHH
Confidence 9999999999999999999987 8899999999999999999999 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCc-ccC--CCCceeecEEEecCCCccc
Q 014515 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGE-RLG--AKGYYIKPTVFTGVKDDML 316 (423)
Q Consensus 240 f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~-~~~--~~g~~~~Ptvl~~~~~~~~ 316 (423)
|+++|+++++++++|+|.|+++++||+++..++++++++|++++++|+++++||. ..+ ..|+|++|||+.+++++|+
T Consensus 319 f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~ 398 (497)
T 3i44_A 319 AIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMR 398 (497)
T ss_dssp HHHHHHHHHHHCCBCCTTSCSSCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSH
T ss_pred HHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCH
Confidence 9999999999999999999999999999999999999999999999999999994 332 2689999999999999999
Q ss_pred ccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCC
Q 014515 317 IAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQG 396 (423)
Q Consensus 317 ~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g 396 (423)
+++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||. ....+.+||||+|.||+|
T Consensus 399 i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~-~~~~~~~PfGG~k~SG~G 477 (497)
T 3i44_A 399 IFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNG-HELPGGSYFGGVKFSGRA 477 (497)
T ss_dssp HHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEETT-CCCCTTCCBCCSGGGCCC
T ss_pred HHcCcccCceEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcCeEEECC-CCCCCCCCcCCcCcCcCC
Confidence 9999999999999999999999999999999999999999999999999999999999994 556788999999999999
Q ss_pred CcchHHHHHhhheeeEEE
Q 014515 397 REKGSYSLSNYLQVKAVV 414 (423)
Q Consensus 397 ~~~g~~~l~~~~~~k~v~ 414 (423)
+++|.+|+++|++.|+|+
T Consensus 478 r~~G~~gl~~~t~~K~v~ 495 (497)
T 3i44_A 478 REGGLWGIKEFLDTKAIS 495 (497)
T ss_dssp CBSHHHHHHTTEEEEEES
T ss_pred ccchHHHHHHhcceeEEE
Confidence 999999999999999874
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-92 Score=712.42 Aligned_cols=413 Identities=31% Similarity=0.490 Sum_probs=393.7
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..+++. |+..+++.+++++.+.++..+.......+...++.++|
T Consensus 48 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P 126 (462)
T 3etf_A 48 TSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKPIKQARA-EVTKSAALCDWYAEHGPAMLNPEPTLVENQQAVIEYRP 126 (462)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHHTSCEECSSGGGCEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHhHHHhcCCcccCCCCceeEEEeec
Confidence 57899999999999999999999999999999999999875 99999999999999887766554222234567899999
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 160 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v 160 (423)
+|||++|+|||||+...++++++||++||+||+|||+.+|.++.++.+++.++|+|+|+++++++ +.+.+..|+.||++
T Consensus 127 ~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~l~~aglP~gv~~vv~g-~~~~~~~l~~~~~v 205 (462)
T 3etf_A 127 LGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQMIARILAEAGTPAGVYGWVNA-NNEGVSQMINDPRI 205 (462)
T ss_dssp CSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHTTCCBTTEEECCC-CHHHHHHHHTSTTE
T ss_pred CcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcCeEEEEEC-CHHHHHHHhcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999998 56778899999999
Q ss_pred ceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHHH
Q 014515 161 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240 (423)
Q Consensus 161 ~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~f 240 (423)
+.|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|
T Consensus 206 ~~v~fTGS~~~g~~i~~~aa~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f 284 (462)
T 3etf_A 206 AAVTVTGSVRAGAAIGAQAGA-ALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAF 284 (462)
T ss_dssp EEEEEESCHHHHHHHHHHHHH-TTCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHH
T ss_pred CEEEEeCCchHHHHHHHHHhc-cCCceEEEcCCCCccEECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHH
Confidence 999999999999999999988 7899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCccccccc
Q 014515 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKD 320 (423)
Q Consensus 241 ~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~ 320 (423)
+++|+++++++++|+|.++++++||+++..+++++.+++++++++|+++++||...+..|+|++|||+.++++++++++|
T Consensus 285 ~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~e 364 (462)
T 3etf_A 285 TDRFVAAAAALKMGDPLVEENDLGPMARFDLRDELHQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQ 364 (462)
T ss_dssp HHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHS
T ss_pred HHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcC
Confidence 99999999999999999999999999999999999999999999999999999866667999999999999999999999
Q ss_pred ccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCCCcch
Q 014515 321 EIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKG 400 (423)
Q Consensus 321 E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g 400 (423)
|+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++...+.+||||+|.||+|+++|
T Consensus 365 E~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~g 444 (462)
T 3etf_A 365 ELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEMAARLECGGVFINGYSASDARVAFGGVKKSGFGRELS 444 (462)
T ss_dssp CCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEECSCHHHHHHHHHHCCSSEEEESSCCCCCTTSCBCCSGGGEECCBSH
T ss_pred ceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcCCCCCCccch
Confidence 99999999999999999999999999999999999999999999999999999999988778899999999999999999
Q ss_pred HHHHHhhheeeEEEEe
Q 014515 401 SYSLSNYLQVKAVVTA 416 (423)
Q Consensus 401 ~~~l~~~~~~k~v~~~ 416 (423)
.+|+++||+.|+|+++
T Consensus 445 ~~g~~~~~~~k~v~~~ 460 (462)
T 3etf_A 445 HFGLHEFCNVQTVWKN 460 (462)
T ss_dssp HHHHHTTEEEEEEEEC
T ss_pred HHHHHHHhceeEEEEe
Confidence 9999999999999875
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-92 Score=715.02 Aligned_cols=407 Identities=32% Similarity=0.571 Sum_probs=388.2
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++.. |+..+++.+++++.++++..+...+.. +...+..++|
T Consensus 53 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~P 130 (486)
T 3pqa_A 53 LPITKRYNILMNIAKQIKEKKEELAKILAIDAGKPIKQARV-EVERSIGTFKLAAFYVKEHRDEVIPSD-DRLIFTRREP 130 (486)
T ss_dssp CCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHCCEEEECCT-TEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCceecCC-CceeEEEEcc
Confidence 57899999999999999999999999999999999999875 999999999999998887765544433 5678899999
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHc----CCCCCcEEEEeCCchhHHHHhhc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNIVSGYGPTAGAALAS 156 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~a----g~P~g~v~~v~~~~~~~~~~l~~ 156 (423)
+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++ |+|+|++++++|++.+.++.|+.
T Consensus 131 ~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~ 210 (486)
T 3pqa_A 131 VGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVV 210 (486)
T ss_dssp CSEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHH
T ss_pred ccEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999 99999999999988888999999
Q ss_pred ccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCcc
Q 014515 157 HMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 236 (423)
Q Consensus 157 ~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~ 236 (423)
||+||.|+||||+.+|+.|++.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++
T Consensus 211 ~p~vd~V~fTGS~~~g~~i~~~aa---~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i 287 (486)
T 3pqa_A 211 NEKVNMISFTGSSKVGELITKKAG---FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESI 287 (486)
T ss_dssp CTTCCEEEEESCHHHHHHHHHHCC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGG
T ss_pred CCCccEEEEECChHHHHHHHHHcC---CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHH
Confidence 999999999999999999998765 79999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCccc
Q 014515 237 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDML 316 (423)
Q Consensus 237 ~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~ 316 (423)
+|+|+++|+++++++++|+|.|+++++||+++..+++++.+++++++++|+++++||.. .|+|++|||+ +++++|+
T Consensus 288 ~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl-~v~~~~~ 363 (486)
T 3pqa_A 288 ADKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR---DKALFYPTIL-EVDRDNI 363 (486)
T ss_dssp HHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEE-ECCTTSG
T ss_pred HHHHHHHHHHHHHhcccCCCCcCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCcEeccEEE-eCCCCCh
Confidence 99999999999999999999999999999999999999999999999999999999975 5899999999 9999999
Q ss_pred ccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC-CCCCCCCCCCCCCC
Q 014515 317 IAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQ 395 (423)
Q Consensus 317 ~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~pfgG~~~SG~ 395 (423)
+++||+||||++|++|+| ||||+++|+++|||++||||+|.++++++++++++|+|+||+++.. .+.+||||+|+||+
T Consensus 364 i~~eEiFGPVl~v~~~~~-deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~ 442 (486)
T 3pqa_A 364 LCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGL 442 (486)
T ss_dssp GGTCCCCSSEEEEEEECH-HHHHHHHTCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSCTTCCCTTSCBCCSGGGEE
T ss_pred hhcccccccEEEEEEEcH-HHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEEeCCCCcCCCCCCCCCcCcCcC
Confidence 999999999999999999 9999999999999999999999999999999999999999997653 35899999999999
Q ss_pred CCcchHHHHHhhheeeEEEEec
Q 014515 396 GREKGSYSLSNYLQVKAVVTAL 417 (423)
Q Consensus 396 g~~~g~~~l~~~~~~k~v~~~~ 417 (423)
|+++|.+|+++|++.|+|+++.
T Consensus 443 Gr~~g~~gl~~f~~~k~v~~~~ 464 (486)
T 3pqa_A 443 GREGVKYAMEEMSNIKTIIISK 464 (486)
T ss_dssp SCBSHHHHHHHTEEEEEEEEEC
T ss_pred CCCCcHHHHHHhhceEEEEEcC
Confidence 9999999999999999998875
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-92 Score=720.77 Aligned_cols=415 Identities=27% Similarity=0.457 Sum_probs=390.6
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCC-CCCCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP-ADGPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++.. |+..+++.+++++.+.+...+...+ ...+...+..++
T Consensus 83 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (521)
T 4e4g_A 83 TNPQRRARVFMKFVQLLNDNMNELAEMLSREHGKTIDDAKG-DIVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQ 161 (521)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCHHHHHH-HHHHHHHHHHHHHTHHHHTCEEEEEEEETTEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEc
Confidence 57899999999999999999999999999999999999875 9999999999999877666554322 123456789999
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccC
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 159 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~ 159 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..|.+++.++|+|+|++++++|+ .+.++.|+.||+
T Consensus 162 P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g~-~~~~~~L~~~p~ 240 (521)
T 4e4g_A 162 PVGIGAGITPFNFPGMIPMWMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNGD-KGAVDAILTHPD 240 (521)
T ss_dssp ECCEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCCC-HHHHHHHHTCTT
T ss_pred CCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeCC-hHHHHHHHhCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999994 556799999999
Q ss_pred cceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCc-cHH
Q 014515 160 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES-VYD 238 (423)
Q Consensus 160 v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~-~~~ 238 (423)
||.|+||||+.+|+.|++.+++ ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++ ++|
T Consensus 241 vd~I~FTGS~~vG~~i~~~aa~-~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d 319 (521)
T 4e4g_A 241 IAAVSFVGSTPIARYVYGTAAM-NGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETAN 319 (521)
T ss_dssp CCEEEEESCHHHHHHHHHHHHH-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHH
T ss_pred cCEEEEECCHHHHHHHHHHHhh-cCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHH
Confidence 9999999999999999999987 88999999999999999999999999999999999999999999999999999 999
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccc----CCCCceeecEEEecCCCc
Q 014515 239 QFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL----GAKGYYIKPTVFTGVKDD 314 (423)
Q Consensus 239 ~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~----~~~g~~~~Ptvl~~~~~~ 314 (423)
+|+++|+++++++++|+|.|+++++||+++..+++++.++|++++++|+++++||... +..|+|++|||+.+++++
T Consensus 320 ~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~ 399 (521)
T 4e4g_A 320 RLIDKLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPD 399 (521)
T ss_dssp HHHHHHHHHHHTCCBCCTTCTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTT
T ss_pred HHHHHHHHHHHhccCCCCCCccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCC
Confidence 9999999999999999999999999999999999999999999999999999999752 246899999999999999
Q ss_pred ccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC-CCCCCCCCCCCC
Q 014515 315 MLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQS 393 (423)
Q Consensus 315 ~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~pfgG~~~S 393 (423)
|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||++... .+.+||||+|.|
T Consensus 400 ~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~k~S 479 (521)
T 4e4g_A 400 MDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDAARDFASRINIGMVGVNVPIPVPLAYHSFGGWKSS 479 (521)
T ss_dssp SHHHHSCCCSSEEEECCBSSHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHHCCCSEEEESCSSCCCCTTSCBCCEETT
T ss_pred CHhhcCcccCcEEEEEEeCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCcCCcccC
Confidence 9999999999999999999999999999999999999999999999999999999999999987544 477999999999
Q ss_pred CCC--CcchHHHHHhhheeeEEEEecC
Q 014515 394 GQG--REKGSYSLSNYLQVKAVVTALK 418 (423)
Q Consensus 394 G~g--~~~g~~~l~~~~~~k~v~~~~~ 418 (423)
|+| +++|.+|+++|++.|+|++++.
T Consensus 480 G~G~~~~~G~~gl~~ft~~K~v~~~~~ 506 (521)
T 4e4g_A 480 SFGDLNQHGTDSIKFWTRTKTITSRWP 506 (521)
T ss_dssp EESSCCBSHHHHHHHTEEEEEEEECCC
T ss_pred CCCCCccchHHHHHHhheEEEEEEecC
Confidence 999 7999999999999999998864
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-92 Score=718.24 Aligned_cols=413 Identities=37% Similarity=0.603 Sum_probs=392.7
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCC-CCCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++.. |+..+++.+++++.+.++..++..+. ..+...+..++
T Consensus 67 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~ 145 (487)
T 2w8n_A 67 VSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHG-EILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQ 145 (487)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCCEEECCSCTTCEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEe
Confidence 57899999999999999999999999999999999999875 99999999999999887766654332 23456789999
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEe---CCchhHHHHhhc
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVS---GYGPTAGAALAS 156 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~---~~~~~~~~~l~~ 156 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..|.+++.++|+|+|++|+++ |++.+.++.|++
T Consensus 146 P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~ 225 (487)
T 2w8n_A 146 PIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICT 225 (487)
T ss_dssp ECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTT
T ss_pred cceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999 766778999999
Q ss_pred ccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCcc
Q 014515 157 HMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 236 (423)
Q Consensus 157 ~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~ 236 (423)
||+||+|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++
T Consensus 226 ~~~v~~V~fTGS~~~g~~i~~~aa~-~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i 304 (487)
T 2w8n_A 226 DPLVSKISFTGSTTTGKILLHHAAN-SVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGI 304 (487)
T ss_dssp CTTEEEEEEEECHHHHHHHHHHHHT-TTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHH
T ss_pred CCCcCEEEEeCCHHHHHHHHHHHhc-cCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccH
Confidence 9999999999999999999999987 899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhh-cccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCc-eeecEEEecCCCc
Q 014515 237 YDQFVEKANALAMK-RVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY-YIKPTVFTGVKDD 314 (423)
Q Consensus 237 ~~~f~~~l~~~~~~-~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~-~~~Ptvl~~~~~~ 314 (423)
+|+|+++|++++++ +++|+|.++++++||+++..+++++.+++++++++|+++++||... ..|+ |++|||+.+++++
T Consensus 305 ~d~f~~~l~~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~-~~g~~~~~Ptvl~~v~~~ 383 (487)
T 2w8n_A 305 HDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRH-QLGKNFFEPTLLCNVTQD 383 (487)
T ss_dssp HHHHHHHHHHHHHHHCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBC-TTCTTCBCCEEEEEECGG
T ss_pred HHHHHHHHHHHHHhhcccCCcccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC-CCCCceECCEEEecCCCc
Confidence 99999999999999 9999999999999999999999999999999999999999999764 3588 9999999999999
Q ss_pred ccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCC
Q 014515 315 MLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSG 394 (423)
Q Consensus 315 ~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG 394 (423)
|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++....+.+||||+|.||
T Consensus 384 ~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~~~SG 463 (487)
T 2w8n_A 384 MLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSG 463 (487)
T ss_dssp GGTTCTTCCSSEEEEEEESCHHHHHHHHTCTTCCSEEEEECCCHHHHHHHHHHSCSSEEEESCSCCCCTTSCBCCSGGGE
T ss_pred chhhhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEeCCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999987777889999999999
Q ss_pred CCCcchHHHHHhhheeeEEEEe
Q 014515 395 QGREKGSYSLSNYLQVKAVVTA 416 (423)
Q Consensus 395 ~g~~~g~~~l~~~~~~k~v~~~ 416 (423)
+|+++|.+|+++|++.|+|+++
T Consensus 464 ~G~~~G~~~l~~f~~~k~v~~~ 485 (487)
T 2w8n_A 464 LGREGSKYGIDEYLELKYVCYG 485 (487)
T ss_dssp ESCBSTTTGGGGGEEEEEEEEC
T ss_pred cCCCchHHHHHHhcCccEEEEe
Confidence 9999999999999999999875
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-91 Score=715.69 Aligned_cols=418 Identities=34% Similarity=0.552 Sum_probs=376.2
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCC--CCCCceeEee
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA--DGPYHVQTLH 78 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 78 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++.. |+..+++.+++++.+.++..+ ..+. ..+...++.+
T Consensus 69 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-Ev~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~ 146 (508)
T 3r64_A 69 TPAAERSAIIYRAAELLEEHREEIVEWLIKESGSTRSKANL-EITLAGNITKESASFPGRVHG-RISPSNTPGKENRVYR 146 (508)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCCCHHHHHH-HHHHHHHHHHHHTTSTTTCCE-EEECCSSTTEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHhhhhcC-cccccCCCCceeEEEE
Confidence 57899999999999999999999999999999999999986 999999999999988766554 3332 2346788999
Q ss_pred ccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHH-HHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcc
Q 014515 79 EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA-LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH 157 (423)
Q Consensus 79 ~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~-~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~ 157 (423)
+|+|||++|+|||||+...++++++||++||+||+|||+.+|.++ ..|.+++.++|+|+|++++++|++.+.++.|+.|
T Consensus 147 ~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~ 226 (508)
T 3r64_A 147 VAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTH 226 (508)
T ss_dssp EECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHC
T ss_pred ecceEEEEECCCcchHHHHHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhC
Confidence 999999999999999999999999999999999999999999999 9999999999999999999999778899999999
Q ss_pred cCcceEeeecCchHHHHHHHHHhhC-CCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCcc
Q 014515 158 MEVDKLAFTGSTTTGKIVLQLAAKS-NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 236 (423)
Q Consensus 158 ~~v~~v~~tGs~~~~~~v~~~~a~~-~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~ 236 (423)
|+||.|+||||+.+|+.|++.+++. +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++
T Consensus 227 p~vd~I~fTGS~~~g~~i~~~aa~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i 306 (508)
T 3r64_A 227 AVPKLISFTGSTPVGRRVGELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAV 306 (508)
T ss_dssp SSCSEEEEESCHHHHHHHHHHHHSSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHH
T ss_pred CCccEEEEECCHHHHHHHHHHhhcccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhH
Confidence 9999999999999999999988741 579999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCccc
Q 014515 237 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDML 316 (423)
Q Consensus 237 ~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~ 316 (423)
+|+|+++|+++++++++|+|.++++++||+++..+++++++++++++++|+++++||.. .|+|+.|||+.+++++|+
T Consensus 307 ~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl~~v~~~~~ 383 (508)
T 3r64_A 307 HDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI---EGRLVHPHVFSDVTSDME 383 (508)
T ss_dssp HHHHHHHHHHHHHTCCBSCTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE---ETTEECCEEEEEECTTSG
T ss_pred HHHHHHHHHHHHHhccCCCCccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC---CCcEEecEEEecCCCCCh
Confidence 99999999999999999999999999999999999999999999999999999999975 689999999999999999
Q ss_pred ccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC-CCCCCCCCCCCCCC
Q 014515 317 IAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQ 395 (423)
Q Consensus 317 ~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~pfgG~~~SG~ 395 (423)
+++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++.. .+.+||||+|.||+
T Consensus 384 i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~~~SG~ 463 (508)
T 3r64_A 384 IAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGL 463 (508)
T ss_dssp GGTSCCCSSEEEEEEESSHHHHHHHHTSSSCCSCEEEECSCHHHHHHHHTTSCSSEEEECC-------------------
T ss_pred hhcccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCcCCcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999997654 68899999999999
Q ss_pred CCcchHHHHHhhheeeEEEEec-----CCCCCC
Q 014515 396 GREKGSYSLSNYLQVKAVVTAL-----KNPAWL 423 (423)
Q Consensus 396 g~~~g~~~l~~~~~~k~v~~~~-----~~~~~~ 423 (423)
|+++|.+|+++||+.|+|+++. +++.||
T Consensus 464 Gr~~G~~~l~~ft~~k~v~~~~~~~~~~~~~~~ 496 (508)
T 3r64_A 464 GRFNGDWAIEEFTTDRWIGIKRSAENLYFQSHH 496 (508)
T ss_dssp -CCCHHHHHHHTEEEEEEEEECCSTTCCCC---
T ss_pred CcCccHHHHHHhhceEEEEEecccchhcchhhc
Confidence 9999999999999999999885 357776
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-91 Score=716.32 Aligned_cols=414 Identities=31% Similarity=0.490 Sum_probs=391.0
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCC---CC--CCcee
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA---DG--PYHVQ 75 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~---~~--~~~~~ 75 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++. .|+..+++.+++++.++++..++..+. .. +...+
T Consensus 74 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~ 152 (501)
T 1uxt_A 74 MPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGL 152 (501)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHTGGGGGGGTCCEEEESTTSSTTTTEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccccCCCcCceEE
Confidence 5789999999999999999999999999999999999988 599999999999999887776554332 22 33678
Q ss_pred EeeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhh
Q 014515 76 TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 155 (423)
Q Consensus 76 ~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~ 155 (423)
..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++++++|++ +.++.|+
T Consensus 153 ~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~-~~g~~L~ 231 (501)
T 1uxt_A 153 VRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIV 231 (501)
T ss_dssp EEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCH-HHHHHHH
T ss_pred EEEeeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCc-HHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999976 8899999
Q ss_pred cccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCc
Q 014515 156 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES 235 (423)
Q Consensus 156 ~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~ 235 (423)
.||++|+|+||||+.+|+.|++.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++
T Consensus 232 ~~~~vd~I~FTGS~~~G~~i~~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~ 308 (501)
T 1uxt_A 232 ADDRVAAVSFTGSTEVGERVVKVGG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERP 308 (501)
T ss_dssp TCTTCCEEEEESCHHHHHHHHHHHC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHH
T ss_pred hCCCcCEEEEeCcHHHHHHHHHhcC---CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccc
Confidence 9999999999999999999999876 7999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCC-ceeecEEEecCC--
Q 014515 236 VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG-YYIKPTVFTGVK-- 312 (423)
Q Consensus 236 ~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g-~~~~Ptvl~~~~-- 312 (423)
++|+|+++|+++++++++|+|.|+++++||+++..+++++++++++++++|+++++||.. .| +|++|||+.+++
T Consensus 309 i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~---~g~~~~~Ptvl~~v~~~ 385 (501)
T 1uxt_A 309 VYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR---LGPTYVQPTFVEAPADR 385 (501)
T ss_dssp HHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB---CSSSCBCCEEEECCHHH
T ss_pred hHHHHHHHHHHHHHhccCCCccccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCCceECCEEEeCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999975 57 999999999999
Q ss_pred -CcccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCc-CCCCCCCCCCCC
Q 014515 313 -DDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCF-DVFDAAIPFGGY 390 (423)
Q Consensus 313 -~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~-~~~~~~~pfgG~ 390 (423)
++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++ +...+.+||||+
T Consensus 386 ~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~PfGG~ 465 (501)
T 1uxt_A 386 VKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGR 465 (501)
T ss_dssp HTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCCE
T ss_pred CCcCHHHhCcccCceEEEEeeCCHHHHHHHHhcCCCCcEEEEeCCCHHHHHHHHHhCCEeeEEEeCCCCCCCCCCCCCCc
Confidence 999999999999999999999999999999999999999999999999999999999999999997 566788999999
Q ss_pred CCCCCCCcchHHHHHhhheeeEEEEecC-CCCC
Q 014515 391 KQSGQGREKGSYSLSNYLQVKAVVTALK-NPAW 422 (423)
Q Consensus 391 ~~SG~g~~~g~~~l~~~~~~k~v~~~~~-~~~~ 422 (423)
|+||+|+++|.+|+++|++.|+|++++. +.+|
T Consensus 466 k~SG~G~~~G~~~l~~f~~~k~v~~~~~~~~~~ 498 (501)
T 1uxt_A 466 KKSGVFREGIGYAVEAVTAYKTIVFNYKGKGVW 498 (501)
T ss_dssp ETTEESCBSTTTTHHHHEEEEEEEEECTTSSSS
T ss_pred CCCCCCccChHHHHHHhCceeEEEEecCCCccc
Confidence 9999999999999999999999988763 3444
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-90 Score=710.64 Aligned_cols=413 Identities=33% Similarity=0.541 Sum_probs=387.5
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCC--CCCCCceeEee
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP--ADGPYHVQTLH 78 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 78 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++. .|+..+++.+++++.++++..+...+ ...+...+..+
T Consensus 93 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (516)
T 1uzb_A 93 WPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEAS-ADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFY 171 (516)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccccCCCCceEEEEE
Confidence 5789999999999999999999999999999999999987 49999999999999988777665422 22245678899
Q ss_pred ccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhccc
Q 014515 79 EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHM 158 (423)
Q Consensus 79 ~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~ 158 (423)
+|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|.+++.++|+|+|++++++|.+.+.++.|+.||
T Consensus 172 ~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~ 251 (516)
T 1uzb_A 172 VPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHP 251 (516)
T ss_dssp EECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCT
T ss_pred eccceEEEECCCccHHHHHHHHHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999997788999999999
Q ss_pred CcceEeeecCchHHHHHHHHHhh-----CCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEe
Q 014515 159 EVDKLAFTGSTTTGKIVLQLAAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVH 233 (423)
Q Consensus 159 ~v~~v~~tGs~~~~~~v~~~~a~-----~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~ 233 (423)
+||+|+||||+.+|+.|++.++. .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||
T Consensus 252 ~v~~I~FTGS~~~G~~i~~~aa~~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~ 331 (516)
T 1uzb_A 252 RIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILT 331 (516)
T ss_dssp TCCEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEE
T ss_pred CcCEEEecCCHHHHHHHHHHhhhccccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEc
Confidence 99999999999999999998871 2789999999999999999999999999999999999999999999999999
Q ss_pred CccHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCC
Q 014515 234 ESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKD 313 (423)
Q Consensus 234 ~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~ 313 (423)
++++|+|+++|+++++++++|+| ++++++||+++..+++++.+++++++++| ++++||...+..|+|++|||+.++++
T Consensus 332 ~~i~d~f~~~l~~~~~~~~~G~p-~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~~~~~g~~~~Ptvl~~v~~ 409 (516)
T 1uzb_A 332 QGAYEPVLERVLKRAERLSVGPA-EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPP 409 (516)
T ss_dssp HHHHHHHHHHHHHHHTTCCBSCG-GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSBCSSSSCCBCCEEEESCCT
T ss_pred hHHHHHHHHHHHHHHHhccCCCC-ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCccCCCCCcEECCEEEECCCC
Confidence 99999999999999999999999 99999999999999999999999999998 89999976334689999999999999
Q ss_pred cccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC--CCCCCCCCCCC
Q 014515 314 DMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYK 391 (423)
Q Consensus 314 ~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~pfgG~~ 391 (423)
+|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||+... ..+.+||||+|
T Consensus 410 ~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~~PfGG~k 489 (516)
T 1uzb_A 410 KARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFK 489 (516)
T ss_dssp TSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSG
T ss_pred CCHhhhccccCceEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCCCCCcC
Confidence 9999999999999999999999999999999999999999999999999999999999999998643 35789999999
Q ss_pred CCCCCC-cchHHHHHhhheeeEEEEe
Q 014515 392 QSGQGR-EKGSYSLSNYLQVKAVVTA 416 (423)
Q Consensus 392 ~SG~g~-~~g~~~l~~~~~~k~v~~~ 416 (423)
.||+|+ ++|.+++++|++.|+|+++
T Consensus 490 ~SG~G~~~~g~~~l~~f~~~k~v~~~ 515 (516)
T 1uzb_A 490 LSGTNAKTGALDYLRLFLEMKAVAER 515 (516)
T ss_dssp GGBSCCCBTSHHHHHTTEEEEEEEEE
T ss_pred cCCCCCccchHHHHHHcCCeeEEEec
Confidence 999994 7899999999999999875
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-90 Score=709.48 Aligned_cols=414 Identities=28% Similarity=0.486 Sum_probs=387.3
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCC-CCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++. .|+..+++.+++++.+.++..+...+.. .+...+..++
T Consensus 78 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~ 156 (500)
T 2j6l_A 78 IPAPKRGEIVRQIGDALREKIQVLGSLVSLEMGKILVEGV-GEVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWN 156 (500)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHH-HHHHHHHHHHHHHHHHTTTCCCBEECCSSTTEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccCCCceeEEEEe
Confidence 5789999999999999999999999999999999999985 5999999999999988776655443322 2344578899
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHH----cCCCCCcEEEEeCCchhHHHHhh
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHE----AGLPPGVLNIVSGYGPTAGAALA 155 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~----ag~P~g~v~~v~~~~~~~~~~l~ 155 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.+ +|+|+|++++++| +.+.++.|+
T Consensus 157 P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g-~~~~g~~L~ 235 (500)
T 2j6l_A 157 PVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMA 235 (500)
T ss_dssp ECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECC-SHHHHHHHH
T ss_pred cccEEEEECCCcchhhHHHHHHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeC-CHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998888664 6999999999999 788899999
Q ss_pred cccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCc
Q 014515 156 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES 235 (423)
Q Consensus 156 ~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~ 235 (423)
.||++|+|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++
T Consensus 236 ~~~~vd~I~FTGS~~~g~~i~~~aa~-~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~ 314 (500)
T 2j6l_A 236 KDERVNLLSFTGSTQVGKQVGLMVQE-RFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHES 314 (500)
T ss_dssp HCTTCSEEEEESCHHHHHHHHHHHHH-TTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETT
T ss_pred cCCCcCEEEEECCHHHHHHHHHHhcc-CCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHH
Confidence 99999999999999999999999987 78999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCcc
Q 014515 236 VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDM 315 (423)
Q Consensus 236 ~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~ 315 (423)
++|+|+++|+++++++++|+|.|+++++||+++..+++++++++++++++|+++++||...+..|+|++|||+.+++++|
T Consensus 315 i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~ 394 (500)
T 2j6l_A 315 IHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDA 394 (500)
T ss_dssp THHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTC
T ss_pred HHHHHHHHHHHHhhhcccCCcccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCCEEcCEEEECCCCcC
Confidence 99999999999999999999999999999999999999999999999999999999998644568999999999999999
Q ss_pred cccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHH--HhcceeEEEEcCcCC-CCCCCCCCCCCC
Q 014515 316 LIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLM--RALRVGSVWINCFDV-FDAAIPFGGYKQ 392 (423)
Q Consensus 316 ~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~--~~l~~g~v~iN~~~~-~~~~~pfgG~~~ 392 (423)
++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++ .++++|+|+||+... ..+.+||||+|.
T Consensus 395 ~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~V~vN~~~~~~~~~~PfGG~k~ 474 (500)
T 2j6l_A 395 SIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKH 474 (500)
T ss_dssp HHHHSCCSSSEEEEEEECCHHHHHHHHHTSSCCSEEEEECCCHHHHHHHHSTTSCCSSEEEESSCTTCCCTTSEECCSGG
T ss_pred hhhcCcccCceEEEEeeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHhhccCCeeEEEECCCCccCCCCCCcCCcCC
Confidence 99999999999999999999999999999999999999999999999999 779999999998654 346899999999
Q ss_pred CCCCCcchHHHHHhhheeeEEEEec
Q 014515 393 SGQGREKGSYSLSNYLQVKAVVTAL 417 (423)
Q Consensus 393 SG~g~~~g~~~l~~~~~~k~v~~~~ 417 (423)
||+|+++|.+|+++|++.|+|++++
T Consensus 475 SG~G~~~g~~~~~~f~~~k~v~~~~ 499 (500)
T 2j6l_A 475 TGGGRESGSDAWKQYMRRSTCTINY 499 (500)
T ss_dssp GCSCCEESTTGGGGGEEEEEEEEEC
T ss_pred CCCCCcchHHHHHHhhceEEEEEeC
Confidence 9999999999999999999998763
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-91 Score=708.47 Aligned_cols=409 Identities=33% Similarity=0.509 Sum_probs=386.5
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCC-CC----Cce-
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GP----YHV- 74 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~----~~~- 74 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++.. |+..+++.+++++.+.++..+...+.. .+ ...
T Consensus 59 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (475)
T 1euh_A 59 LSYIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAVS-EVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIA 137 (475)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEE
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcccCCCCCccccceee
Confidence 57899999999999999999999999999999999999864 999999999999988876554432211 23 355
Q ss_pred eEeeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHh
Q 014515 75 QTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAAL 154 (423)
Q Consensus 75 ~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l 154 (423)
+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++++++|++.+.++.|
T Consensus 138 ~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L 217 (475)
T 1euh_A 138 VVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYI 217 (475)
T ss_dssp EEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHH
T ss_pred EEEEeccceEEEECCCCchHHHHHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999777789999
Q ss_pred hcccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeC
Q 014515 155 ASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHE 234 (423)
Q Consensus 155 ~~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~ 234 (423)
+.||++|.|+||||+.+|+.|++.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+
T Consensus 218 ~~~~~v~~V~fTGS~~~g~~i~~~aa---~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~ 294 (475)
T 1euh_A 218 VEHQAVNFINFTGSTGIGERIGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVME 294 (475)
T ss_dssp HHCTTCCEEEEESCHHHHHHHHHHTT---TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEH
T ss_pred HhCCCcCEEEEECchHHHHHHHHhcC---CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEeh
Confidence 99999999999999999999999876 799999999999999999999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCc
Q 014515 235 SVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDD 314 (423)
Q Consensus 235 ~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~ 314 (423)
+++|+|+++|+++++++++|+|.| ++++||+++..+++++.+++++++++|+++++||.. .|+|++|||+.+++++
T Consensus 295 ~i~d~f~~~l~~~~~~~~~g~p~~-~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~---~g~~~~Ptvl~~v~~~ 370 (475)
T 1euh_A 295 SVADELVEKIREKVLALTIGNPED-DADITPLIDTKSADYVEGLINDANDKGATALTEIKR---EGNLICPILFDKVTTD 370 (475)
T ss_dssp HHHHHHHHHHHHHHHTSCBSCGGG-TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE---ETTEECCEEEESCCTT
T ss_pred hHHHHHHHHHHHHHHhccCCCccc-cCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCceeCCEEEeCCCCc
Confidence 999999999999999999999999 999999999999999999999999999999999975 5899999999999999
Q ss_pred ccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcC-cCCCCCCCCCCCCCCC
Q 014515 315 MLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINC-FDVFDAAIPFGGYKQS 393 (423)
Q Consensus 315 ~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~-~~~~~~~~pfgG~~~S 393 (423)
|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||+ +....+.+||||+|.|
T Consensus 371 ~~~~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~k~S 450 (475)
T 1euh_A 371 MRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKS 450 (475)
T ss_dssp SGGGTSCCCSSEEEEEEESCHHHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCCSTTSCBCCEETT
T ss_pred CHHHcCccccceEEEEecCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHhCCEeeEEECCCCCCCCCCCCcCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999998 6556788999999999
Q ss_pred CCCCcchHHHHHhhheeeEEEEec
Q 014515 394 GQGREKGSYSLSNYLQVKAVVTAL 417 (423)
Q Consensus 394 G~g~~~g~~~l~~~~~~k~v~~~~ 417 (423)
|+|+++|.+|+++|++.|+|++++
T Consensus 451 G~G~~~g~~~~~~~~~~k~v~~~~ 474 (475)
T 1euh_A 451 GAGIQGVKYSIEAMTTVKSVVFDI 474 (475)
T ss_dssp EESCBSHHHHHHHTEEEEEEEEEC
T ss_pred CcCCCccHHHHHHhCCeeEEEEec
Confidence 999999999999999999998764
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-90 Score=708.57 Aligned_cols=413 Identities=31% Similarity=0.496 Sum_probs=371.1
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCC--CCCCceeEee
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA--DGPYHVQTLH 78 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 78 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||+.++.. |+..+++.+++++.+.+...+...+. ..+...+.++
T Consensus 63 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (485)
T 4dng_A 63 STTEDRKAVLQKARGYLHENRDDIIMMIARETGGTIIKSTI-ELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYR 141 (485)
T ss_dssp CCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCSCEECCCCSSTTEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhCCeeccccCCCCceEEEEE
Confidence 57899999999999999999999999999999999999986 99999999999999887766654442 2346788999
Q ss_pred ccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHH-HHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcc
Q 014515 79 EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA-LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH 157 (423)
Q Consensus 79 ~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~-~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~ 157 (423)
+|+|||++|+|||||+...++++++||++||+||+|||+.+|.++ ..|.+++.++|+|+|+++++++++.+.++.|+.|
T Consensus 142 ~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~ 221 (485)
T 4dng_A 142 LPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTN 221 (485)
T ss_dssp EECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHC
T ss_pred ecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhC
Confidence 999999999999999999999999999999999999999999999 9999999999999999999999877899999999
Q ss_pred cCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccH
Q 014515 158 MEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 237 (423)
Q Consensus 158 ~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~ 237 (423)
|++|.|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++
T Consensus 222 p~v~~v~fTGS~~~g~~i~~~aa~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~ 300 (485)
T 4dng_A 222 PIPRLISFTGSTAVGRHIGEIAGR-AFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVY 300 (485)
T ss_dssp SSCSEEEEEECHHHHHHHHHHHHH-HTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHH
T ss_pred CCCCEEEEECCcHHHHHHHHHHhh-hccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHH
Confidence 999999999999999999999887 7899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCcccc
Q 014515 238 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLI 317 (423)
Q Consensus 238 ~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~ 317 (423)
|+|+++|+++++++++|+|.|+++++||+++..+++++.+++++++++|+++++||.. .|+|++|||+.+++++|++
T Consensus 301 d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~---~g~~~~Ptvl~~v~~~~~i 377 (485)
T 4dng_A 301 DEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR---VGNVLTPYVFVGADNNSKI 377 (485)
T ss_dssp HHHHHHHHHHHHHCCBSCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSHH
T ss_pred HHHHHHHHHHHHhccCCCCCcCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC---CCcEECCEEEecCCCCChh
Confidence 9999999999999999999999999999999999999999999999999999999975 6899999999999999999
Q ss_pred cccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC-CCCCCCCCCCCCCCC
Q 014515 318 AKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQG 396 (423)
Q Consensus 318 ~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~pfgG~~~SG~g 396 (423)
++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++.. .+.+||||+|.||+|
T Consensus 378 ~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~~~SG~G 457 (485)
T 4dng_A 378 AQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVG 457 (485)
T ss_dssp HHCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHTTSCSSEEEESCC-------------------
T ss_pred hcCccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCcCCcCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999997654 688999999999999
Q ss_pred CcchHHHHHhhheeeEEEEecC
Q 014515 397 REKGSYSLSNYLQVKAVVTALK 418 (423)
Q Consensus 397 ~~~g~~~l~~~~~~k~v~~~~~ 418 (423)
+++|.+++++||+.|+|+++..
T Consensus 458 ~~~g~~~l~~~t~~k~v~~~~~ 479 (485)
T 4dng_A 458 RFGNPWVVEEFTVTKWISIQKQ 479 (485)
T ss_dssp ---CHHHHHHHEEEEEEEEEC-
T ss_pred ccchHHHHHHhhceEEEEEecC
Confidence 9999999999999999988764
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-90 Score=707.12 Aligned_cols=409 Identities=37% Similarity=0.634 Sum_probs=365.8
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++...|+..+++.+++++.++++..+... +...+..++|
T Consensus 64 ~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~----~~~~~~~~~P 139 (478)
T 3ty7_A 64 TSVKERQALLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEER----RGDDLVVKEA 139 (478)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEE----ETTEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhcccC----CccceEEecC
Confidence 578999999999999999999999999999999999998556999999999999988877655331 2357889999
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 160 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v 160 (423)
+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++.+.++.|+.||++
T Consensus 140 ~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v 219 (478)
T 3ty7_A 140 IGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKV 219 (478)
T ss_dssp CCCEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTC
T ss_pred ceEEEEECCCcchHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999888899999999999
Q ss_pred ceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHHH
Q 014515 161 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240 (423)
Q Consensus 161 ~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~f 240 (423)
|.|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|
T Consensus 220 ~~v~fTGS~~~G~~i~~~aa~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f 298 (478)
T 3ty7_A 220 RMMSFTGSGPTGSKIMEKAAK-DFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAF 298 (478)
T ss_dssp CEEEECSCHHHHCC--CSTTT-TTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHH
T ss_pred CEEEEECcHHHHHHHHHHHHh-cCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHH
Confidence 999999999999999998887 7899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcc-cC--CCCceeecEEEecCCCcccc
Q 014515 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER-LG--AKGYYIKPTVFTGVKDDMLI 317 (423)
Q Consensus 241 ~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~-~~--~~g~~~~Ptvl~~~~~~~~~ 317 (423)
+++|+++++++++|+|.|+++++||+++.++++++++++++++++|+++++||.. .+ ..|+|++|||+.++++++++
T Consensus 299 ~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~ 378 (478)
T 3ty7_A 299 LAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTI 378 (478)
T ss_dssp HHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHH
T ss_pred HHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCccccCCCceeCCEEEecCCCCCcc
Confidence 9999999999999999999999999999999999999999999999999999943 22 36899999999999999999
Q ss_pred cccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCCC
Q 014515 318 AKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGR 397 (423)
Q Consensus 318 ~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~ 397 (423)
++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+ +...+.+||||+|.||+|+
T Consensus 379 ~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~-~~~~~~~PfGG~k~SG~G~ 457 (478)
T 3ty7_A 379 AQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINE-AGRKPDLPFGGYKQSGLGR 457 (478)
T ss_dssp HHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCSSEEEETT-CC-----------------
T ss_pred cCceeECceeEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECC-CCCCCCCCcCCcCcCcCCc
Confidence 999999999999999999999999999999999999999999999999999999999999 6667889999999999999
Q ss_pred cchHHHHHhhheeeEEEE
Q 014515 398 EKGSYSLSNYLQVKAVVT 415 (423)
Q Consensus 398 ~~g~~~l~~~~~~k~v~~ 415 (423)
++|.+|+++||+.|+|+.
T Consensus 458 ~~G~~~l~~~t~~k~v~~ 475 (478)
T 3ty7_A 458 EWGDYGIEEFLEVKSIAG 475 (478)
T ss_dssp -----CCGGGEEEEEEET
T ss_pred cchHHHHHHhcCeEEEEE
Confidence 999999999999999874
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-90 Score=703.78 Aligned_cols=417 Identities=31% Similarity=0.492 Sum_probs=389.6
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCC-CCCCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP-ADGPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|++++++|++++++|+|||..++. .|+..+++.+++++.+.+...++..+ ...+...+.+++
T Consensus 62 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~ 140 (486)
T 1t90_A 62 VAVPRRARILFNFQQLLSQHKEELAHLITIENGKNTKEAL-GEVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRY 140 (486)
T ss_dssp SCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHTTHHHHHCEEEEEEEETTEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEec
Confidence 5789999999999999999999999999999999999887 49999999999998766665554322 122446688999
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccC
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 159 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~ 159 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..|.+++.++|+|+|++++++| +.+.+..|++||+
T Consensus 141 P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~ 219 (486)
T 1t90_A 141 PIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPE 219 (486)
T ss_dssp ECSEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTT
T ss_pred ccCEEEEECCCchhHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEEC-CHHHHHHHHhCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999998 5678999999999
Q ss_pred cceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCe-EEEeCccHH
Q 014515 160 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSR-TFVHESVYD 238 (423)
Q Consensus 160 v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~-v~V~~~~~~ 238 (423)
||+|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++ +|||++ +|
T Consensus 220 v~~I~fTGS~~~g~~i~~~aa~-~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d 297 (486)
T 1t90_A 220 IKAISFVGSKPVGEYVYKKGSE-NLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-AD 297 (486)
T ss_dssp EEEEEEESCHHHHHHHHHHHHH-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HH
T ss_pred CCEEEEeCCHHHHHHHHHHHhc-cCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HH
Confidence 9999999999999999999887 78999999999999999999999999999999999999999999999 999999 99
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC-CCCceeecEEEecCCCcccc
Q 014515 239 QFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-AKGYYIKPTVFTGVKDDMLI 317 (423)
Q Consensus 239 ~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~ 317 (423)
+|+++|+++++++++|+|.++++++||+++..+++++.+++++++++|+++++||...+ ..|+|++|||+.+++++|++
T Consensus 298 ~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~ 377 (486)
T 1t90_A 298 EFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTI 377 (486)
T ss_dssp HHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHH
T ss_pred HHHHHHHHHHHhcccCCCCccCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHh
Confidence 99999999999999999999999999999999999999999999999999999997432 36899999999999999999
Q ss_pred cccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC-CCCCCCCCCCCCCCC
Q 014515 318 AKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQG 396 (423)
Q Consensus 318 ~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~pfgG~~~SG~g 396 (423)
++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+.... .+.+||||+|.||+|
T Consensus 378 ~~eEiFGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~G 457 (486)
T 1t90_A 378 WKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGVPAPMAFFPFSGWKSSFFG 457 (486)
T ss_dssp HHSCCCSSEEEEEEESSHHHHHHHHHHSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCCTTSCCCCEETTEES
T ss_pred hcCcccCceEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCcCCCCcCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999985433 467999999999999
Q ss_pred --CcchHHHHHhhheeeEEEEecCCCC
Q 014515 397 --REKGSYSLSNYLQVKAVVTALKNPA 421 (423)
Q Consensus 397 --~~~g~~~l~~~~~~k~v~~~~~~~~ 421 (423)
+++|.+|+++|++.|+|+.++.++.
T Consensus 458 ~~~~~g~~g~~~~~~~k~v~~~~~~~~ 484 (486)
T 1t90_A 458 TLHANGKDSVDFYTRKKVVTARYPAPD 484 (486)
T ss_dssp SSCSSHHHHHHHTEEEEEEEEECCCCC
T ss_pred CCccchHHHHHHhhceEEEEEecCCCC
Confidence 8999999999999999998875543
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-89 Score=691.99 Aligned_cols=406 Identities=28% Similarity=0.387 Sum_probs=375.4
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCcc----CCCCCCCceeE
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT----APADGPYHVQT 76 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~----~~~~~~~~~~~ 76 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++...|+..++..+++++.......... .....+...++
T Consensus 37 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (469)
T 3sza_A 37 RPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQKLPEWAADEPVEKTPQTQQDELYI 116 (469)
T ss_dssp CSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHHHHHHHHSCEECCCCGGGTTSEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCccccCCCcccee
Confidence 57899999999999999999999999999999999999876799999998888876554432211 11122456789
Q ss_pred eeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhc
Q 014515 77 LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALAS 156 (423)
Q Consensus 77 ~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~ 156 (423)
.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..|.+++.++ +|+|++++++|. .+....|+.
T Consensus 117 ~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~a-lP~gvv~vv~g~-~~~~~~ll~ 194 (469)
T 3sza_A 117 HSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQY-LDKDLYPVINGG-VPETTELLK 194 (469)
T ss_dssp EEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHH-SCTTTSCBCCCS-HHHHHHHTT
T ss_pred eccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh-CCcceEEEEECC-HHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999998 999999999984 445566777
Q ss_pred ccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCcc
Q 014515 157 HMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 236 (423)
Q Consensus 157 ~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~ 236 (423)
| ++|.|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++
T Consensus 195 ~-~vd~I~FTGS~~vG~~i~~~aa~-~lkpv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i 272 (469)
T 3sza_A 195 E-RFDHILYTGSTGVGKIIMTAAAK-HLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSI 272 (469)
T ss_dssp S-CCSEEEEESCHHHHHHHHHHHHT-TTCCEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSCCEEEECGGG
T ss_pred c-CCCEEEEECCHHHHHHHHHHHhh-ccCceEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEehhH
Confidence 7 89999999999999999999987 899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCccc
Q 014515 237 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDML 316 (423)
Q Consensus 237 ~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~ 316 (423)
+|+|+++|+++++++ +|+|.++++++||+++..+++++.+++ +|+++++||... ..|+|++|||+.+++++|+
T Consensus 273 ~d~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~~GG~~~-~~g~~~~PTvl~~v~~~~~ 345 (469)
T 3sza_A 273 QNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLI-----EGQKVAYGGTGD-AATRYIAPTILTDVDPQSP 345 (469)
T ss_dssp HHHHHHHHHHHHHHH-HCSCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEEECCCEE-TTTTEECCEEEESCCTTSG
T ss_pred HHHHHHHHHHHHHHh-cCCCCcccCcccccCCHHHHHHHHHHH-----cCCEEEeCCccC-CCCceeCCeeecCCCCcch
Confidence 999999999999988 699999999999999999999999999 589999999864 4689999999999999999
Q ss_pred ccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcC--CCCCCCCCCCCCCCC
Q 014515 317 IAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFD--VFDAAIPFGGYKQSG 394 (423)
Q Consensus 317 ~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~--~~~~~~pfgG~~~SG 394 (423)
+++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||+.. ...+.+||||+|+||
T Consensus 346 i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~~G~V~vN~~~~~~~~~~~PfGG~k~SG 425 (469)
T 3sza_A 346 VMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSLPFGGVGNSG 425 (469)
T ss_dssp GGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCCCSEEEESCSSGGGSCTTSCBCCCGGGE
T ss_pred hhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCCcceEEEeCCCCCCCCCCCCcCCccccc
Confidence 999999999999999999999999999999999999999999999999999999999999975 346889999999999
Q ss_pred CCCcchHHHHHhhheeeEEEEec
Q 014515 395 QGREKGSYSLSNYLQVKAVVTAL 417 (423)
Q Consensus 395 ~g~~~g~~~l~~~~~~k~v~~~~ 417 (423)
+|+++|.+|+++||+.|+|+++.
T Consensus 426 ~Gr~~G~~g~~~ft~~K~v~~~~ 448 (469)
T 3sza_A 426 MGSYHGKKSFETFSHRRSCLVRP 448 (469)
T ss_dssp ECCBSTHHHHHHTEEEEEEEECC
T ss_pred cCccchHHHHHHhhCeeEEEECC
Confidence 99999999999999999998874
|
| >4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-89 Score=694.34 Aligned_cols=417 Identities=28% Similarity=0.421 Sum_probs=386.5
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccC-C-CCCCCceeEee
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA-P-ADGPYHVQTLH 78 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~-~-~~~~~~~~~~~ 78 (423)
+|.++|.++|+++++.|++|+++|++++++|+||+..+ . .|+...+..+++++....+...... . ...+...+..+
T Consensus 47 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~-~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (474)
T 4h7n_A 47 LGVEGRITTLQQWKQAILSRREQLTEALVNDTGRLSIT-V-LEIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSL 124 (474)
T ss_dssp THHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSCSHHH-H-HHHHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHH-H-HHHHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEE
Confidence 57899999999999999999999999999999998644 3 4999999999999887766544322 1 12344567788
Q ss_pred ccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhccc
Q 014515 79 EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHM 158 (423)
Q Consensus 79 ~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~ 158 (423)
+|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++ +.+.+..|..|
T Consensus 125 ~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~ag~p~gv~~~v~g-~~~~~~~l~~~- 202 (474)
T 4h7n_A 125 VPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVVVKPSEIAPRFVAPLLMALNTVPELRDVLIFVEG-GGETGANLINY- 202 (474)
T ss_dssp EECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEEEEECTTSCTTHHHHHHHHTTCTTTTTTEEECCC-CHHHHHHHHTT-
T ss_pred EeccEEEEECCCCcHHHHHhcccCcchhcCCceeecccccCchHHHHHHhhhhhhcccccceeeccc-cchhhhhhhhc-
Confidence 9999999999999999999999999999999999999999999999999999999999999999998 66778888865
Q ss_pred CcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHH
Q 014515 159 EVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 238 (423)
Q Consensus 159 ~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~ 238 (423)
+|.|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++|
T Consensus 203 -v~~v~FTGS~~~G~~i~~~aa~-~~~~v~lElGGk~p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d 280 (474)
T 4h7n_A 203 -VDFVCFTGSVATGREVAETAAR-RFIPAYLELGGKDPAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFE 280 (474)
T ss_dssp -CSEEEEESCHHHHHHHHHHHHH-HTCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHH
T ss_pred -cceEEeccccchhhhhhhhhhc-ccccccccCCCcCccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHH
Confidence 9999999999999999999988 78999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC-CCCceeecEEEecCCCcccc
Q 014515 239 QFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-AKGYYIKPTVFTGVKDDMLI 317 (423)
Q Consensus 239 ~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~ 317 (423)
+|+++|++++.++++|+|.++++++||+++..+++++.+++++++++|+++++||...+ ..|+|++|||+.+++++|++
T Consensus 281 ~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i 360 (474)
T 4h7n_A 281 EFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGIINDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKV 360 (474)
T ss_dssp HHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGG
T ss_pred HHHHHHHHHhhccccCCCcccccccCccccHHHHHHHHHHHHHHHhhCceeccCCcccccCCCcccCceeEEeecccccc
Confidence 99999999999999999999999999999999999999999999999999999997643 46899999999999999999
Q ss_pred cccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC--CCCCCCCCCCCCCCC
Q 014515 318 AKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQ 395 (423)
Q Consensus 318 ~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~pfgG~~~SG~ 395 (423)
++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+.+. ..+.+||||+|.||+
T Consensus 361 ~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~v~iN~~~~~~~~~~~pfgG~~~SG~ 440 (474)
T 4h7n_A 361 MTEETFGPIMPVMPFPDVEEAVYLANDTIYGLSAAVFAGSEDEALKVARQLNAGAISINDAALTAMMHEGEKNAFNFSGL 440 (474)
T ss_dssp GTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSSHHHHHHHHTTSCCSEEEESSSCGGGTCCCSCCCCCGGGEE
T ss_pred ccccccCcEEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEECCCCccCCcCCCCCCCcCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999998653 457899999999999
Q ss_pred C-CcchHHHHHhhheeeEEEEec---CCCCCC
Q 014515 396 G-REKGSYSLSNYLQVKAVVTAL---KNPAWL 423 (423)
Q Consensus 396 g-~~~g~~~l~~~~~~k~v~~~~---~~~~~~ 423 (423)
| +++|.+|+++|++.|+|+++. ..||||
T Consensus 441 G~~~~G~~g~~~f~~~k~v~~~~~~~~~p~w~ 472 (474)
T 4h7n_A 441 GGSRVGAAGLKRFLRKQAFLIKTNSTSDPWWF 472 (474)
T ss_dssp SCCSSTTHHHHTTEEEEEEEEECSSSCCTTSC
T ss_pred CCCcchHHHHHHhCeEEEEEECCCCCCCCCCc
Confidence 8 789999999999999999985 358887
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-88 Score=697.79 Aligned_cols=421 Identities=27% Similarity=0.412 Sum_probs=390.5
Q ss_pred CCHHHHHHHHHHHHHHHHHc-HHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCC-CCCCCceeEee
Q 014515 1 MTAYERSKIILRFADLLERH-NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP-ADGPYHVQTLH 78 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~-~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 78 (423)
+|.++|+++|+++++.|+++ +++|++++++|+|||+.++...++..+++.+++++.++++..+.... ...+...+.++
T Consensus 119 ~~~~~R~~iL~~~a~~l~~~~~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r 198 (563)
T 4e3x_A 119 KPMADRAQVFLKAADMLSGPRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYR 198 (563)
T ss_dssp SCHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCTTEEEEEECC
T ss_pred CCHHHHHHHHHHHHHHHHhccHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCcceEEEe
Confidence 57899999999999999998 99999999999999999987645999999999999998887664322 22234456777
Q ss_pred ccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhccc
Q 014515 79 EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHM 158 (423)
Q Consensus 79 ~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~ 158 (423)
.|+|||++|+|||||+....+++++|| +||+||+|||+.+|+++..|++++.++|+|+|+||+++|++.+.++.|+.||
T Consensus 199 ~p~GVV~~I~PwNfP~~~~~~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp 277 (563)
T 4e3x_A 199 GLEGFVAAISPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSE 277 (563)
T ss_dssp BCSSEEEEECCSSCHHHHHHHHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCT
T ss_pred cCceEEEEECCchHHHHHHHHHHHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCC
Confidence 888999999999999999999999999 6999999999999999999999999999999999999998888999999999
Q ss_pred CcceEeeecCchHHHHHHHHHhhCCCC------ceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEE
Q 014515 159 EVDKLAFTGSTTTGKIVLQLAAKSNLK------PVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFV 232 (423)
Q Consensus 159 ~v~~v~~tGs~~~~~~v~~~~a~~~~~------~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V 232 (423)
+|++|+||||+.+|+.|++.++. +++ |+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+||
T Consensus 278 ~v~~I~FTGSt~vG~~i~~~aa~-~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V 356 (563)
T 4e3x_A 278 HLCGINFTGSVPTFKHLWRQVAQ-NLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYV 356 (563)
T ss_dssp TEEEEEEESCHHHHHHHHHHHHH-TTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEE
T ss_pred CcCEEEEECCHHHHHHHHHHHHh-hCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEE
Confidence 99999999999999999999987 666 49999999999999999999999999999999999999999999999
Q ss_pred eCccHHHHHHHHHHHHhhcccCCC-CCCCCcccCCCCHHHHHHHHHHHHHHHh-CCCEEEeCCcccCCCCceeecEEEec
Q 014515 233 HESVYDQFVEKANALAMKRVVGDP-FKGGIQQGPQIDSEQFEKILKYIRSGVD-GGAKLETGGERLGAKGYYIKPTVFTG 310 (423)
Q Consensus 233 ~~~~~~~f~~~l~~~~~~~~~g~p-~~~~~~~gp~~~~~~~~~~~~~i~~a~~-~ga~~~~gg~~~~~~g~~~~Ptvl~~ 310 (423)
|++++|+|+++|+++++++++|+| .|+++++||+++..+++++.++|+++++ +|+++++||...+..|+|++|||+.+
T Consensus 357 ~~si~d~f~~~l~~~~~~l~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~~ 436 (563)
T 4e3x_A 357 PKSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIES 436 (563)
T ss_dssp EGGGHHHHHHHHHHHHHTCCBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEECSSSCEECCEEEEE
T ss_pred ecchHHHHHHHHHHHHHhccCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCCCCcEecCEEEec
Confidence 999999999999999999999999 9999999999999999999999999996 79999999987666799999999999
Q ss_pred CCCcccccccccccCeeEEEecCC--HHHHHHHH-hcCCCCceEEEecCCHHHHHHHHHhcc--eeEEEEcCcCC--CCC
Q 014515 311 VKDDMLIAKDEIFGPVQSILKYKD--LDEVIQRS-NASQYGLAAGVFTHNLDTANTLMRALR--VGSVWINCFDV--FDA 383 (423)
Q Consensus 311 ~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~-n~~~~gl~~~v~s~d~~~~~~~~~~l~--~g~v~iN~~~~--~~~ 383 (423)
+++++++++||+||||++|++|+| +||||+++ |+++|||+++|||+|.+++++++++++ +|+|+||+.++ ..+
T Consensus 437 v~~~~~i~~eEiFGPVl~V~~~~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~~~ 516 (563)
T 4e3x_A 437 KDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVG 516 (563)
T ss_dssp SCTTCGGGTSCCCSSEEEEEEECGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHHHHHTTTTCSEEEESSCSCCCCTT
T ss_pred CCCCChhhcCCCcCeEEEEEEECCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHHHHhhhcCeeEEEEcCCCCCCCcC
Confidence 999999999999999999999996 79999999 799999999999999999999999976 99999998764 347
Q ss_pred CCCCCCCCCCCCC-CcchHHHHHhhheeeEEEEecC--CCCCC
Q 014515 384 AIPFGGYKQSGQG-REKGSYSLSNYLQVKAVVTALK--NPAWL 423 (423)
Q Consensus 384 ~~pfgG~~~SG~g-~~~g~~~l~~~~~~k~v~~~~~--~~~~~ 423 (423)
.+||||+|.||+| +++|.+++++|++.|+|...+. .++||
T Consensus 517 ~~PFGG~k~SG~g~~~~G~~~l~~~~~~k~v~~~~~~~~~~~y 559 (563)
T 4e3x_A 517 QQPFGGARASGTNDKPGGPHYILRWTSPQVIKETHKPLGDWRY 559 (563)
T ss_dssp TSCCCCEETTBCCCCTTSTTGGGGGBCCEEEEEECSCCCCSSC
T ss_pred CCCCCCccccCCCCccCCHHHHHHhCceEEEEEeCcCCCcccC
Confidence 7999999999998 8999999999999999998874 34454
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-87 Score=676.42 Aligned_cols=403 Identities=27% Similarity=0.437 Sum_probs=375.3
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCcc-CCC---CCCCceeE
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT-APA---DGPYHVQT 76 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~-~~~---~~~~~~~~ 76 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..+++..|+..+++.+++++..+++..... .+. ..+...+.
T Consensus 47 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (457)
T 3lns_A 47 ADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYV 126 (457)
T ss_dssp CSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHHHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEE
Confidence 57899999999999999999999999999999999999875699999999999998876654321 111 12456889
Q ss_pred eeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhc
Q 014515 77 LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALAS 156 (423)
Q Consensus 77 ~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~ 156 (423)
.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++ +|+|++|+++| +.+.+..|++
T Consensus 127 ~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~a-lP~gvv~vv~g-~~~~~~~L~~ 204 (457)
T 3lns_A 127 VQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEA-FAPEYVAVIQG-GRDENSHLLS 204 (457)
T ss_dssp EEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHH-CCTTTEEECCC-CHHHHHHHTT
T ss_pred EeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh-CCHhhEEEecC-CHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999999 99999999999 6778899998
Q ss_pred ccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCcc
Q 014515 157 HMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 236 (423)
Q Consensus 157 ~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~ 236 (423)
+++|.|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++
T Consensus 205 -~~vd~V~fTGS~~~G~~i~~~aa~-~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i 282 (457)
T 3lns_A 205 -LPFDFIFFTGSPNVGKVVMQAAAK-HLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSV 282 (457)
T ss_dssp -SCCSEEEEESCHHHHHHHHHHHHT-TTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGG
T ss_pred -CCCCEEEEECCHHHHHHHHHHHhh-ccCceEEECCCCCCCeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHH
Confidence 689999999999999999999887 799999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCccc
Q 014515 237 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDML 316 (423)
Q Consensus 237 ~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~ 316 (423)
+|+|+++|++++++++ |.++ ++||+++.++++++.++++++ ++++++||... ..|+|++|||+.+++++|+
T Consensus 283 ~d~f~~~l~~~~~~~~---p~~~--~~gpli~~~~~~rv~~~i~~a---~~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~ 353 (457)
T 3lns_A 283 KDALLERLVERVKTEL---PEIN--STGKLVTERQVQRLVSLLEAT---QGQVLVGSQAD-VSKRALSATVVDGVEWNDP 353 (457)
T ss_dssp HHHHHHHHHHHHHHHC---CSTT--TTCCCSSHHHHHHHHHHHHHC---CSEEEECCCEE-GGGTEECCEEEESCCTTSG
T ss_pred HHHHHHHHHHHHHhcC---CCcc--cccCCCCHHHHHHHHHHHHhc---CCeEEeCCccC-CCCceeCCEEEecCCCCCh
Confidence 9999999999999987 6666 999999999999999999986 35999999753 3689999999999999999
Q ss_pred ccccccccCeeEEEecCCHHHHHHHHhc-CCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC--CCCCCCCCCCCCC
Q 014515 317 IAKDEIFGPVQSILKYKDLDEVIQRSNA-SQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQS 393 (423)
Q Consensus 317 ~~~~E~fgPvl~v~~~~~~~eai~~~n~-~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~pfgG~~~S 393 (423)
+++||+||||++|++|+|+||||+++|+ ++|||++||||+|.++++++++++++|+|+||++.. ..+.+||||+|.|
T Consensus 354 i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~~PfGG~k~S 433 (457)
T 3lns_A 354 LMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGAS 433 (457)
T ss_dssp GGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEEEEECSCHHHHHHHHHTSCCSEEEESCCSGGGGCTTSCBCCCGGG
T ss_pred hhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCcCCcCcC
Confidence 9999999999999999999999999999 999999999999999999999999999999999743 5688999999999
Q ss_pred CCCCcchHHHHHhhheeeEEEEe
Q 014515 394 GQGREKGSYSLSNYLQVKAVVTA 416 (423)
Q Consensus 394 G~g~~~g~~~l~~~~~~k~v~~~ 416 (423)
|+|+++|.+|+++||+.|+|++.
T Consensus 434 G~G~~~g~~~~~~f~~~k~v~~~ 456 (457)
T 3lns_A 434 GMGEYHGHFSYLTFTHKKSVRIV 456 (457)
T ss_dssp EECCBSHHHHHHHTEEEEEEEEC
T ss_pred CCCCCchHHHHHHhhCeeEEEeC
Confidence 99999999999999999999764
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-87 Score=679.42 Aligned_cols=407 Identities=29% Similarity=0.395 Sum_probs=382.0
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
+|.++|.++|+++++.|++++++|++++++|+|||..++.. |+..+++.+++++...+...+...+...+...+..++|
T Consensus 61 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 139 (490)
T 3ju8_A 61 RPLEQRIELLERFAATLKSRADELARVIGEETGKPLWESAT-EVTSMVNKVAISVQAFRERTGEKSGPLADATAVLRHKP 139 (490)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHHSCCEEEEETTEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccccCCCCeeeEEECC
Confidence 57899999999999999999999999999999999999874 99999999999998887766654332223456777999
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 160 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v 160 (423)
+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++++++| +.+.++.|+.||++
T Consensus 140 ~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v 218 (490)
T 3ju8_A 140 HGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGL 218 (490)
T ss_dssp CSEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCC-SHHHHHHHHTCTTC
T ss_pred CCEEEEECCCcchHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHHhCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999 67889999999999
Q ss_pred ceEeeecCchHHHHHHHHHhhCCCCce-EEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCcc-HH
Q 014515 161 DKLAFTGSTTTGKIVLQLAAKSNLKPV-TLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV-YD 238 (423)
Q Consensus 161 ~~v~~tGs~~~~~~v~~~~a~~~~~~~-~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~ 238 (423)
|.|+||||+.+|+.|++.++. +++|+ ++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||+++ +|
T Consensus 219 ~~V~fTGS~~~g~~i~~~aa~-~~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d 297 (490)
T 3ju8_A 219 DGLFFTGSSRTGNLLHSQFGG-QPQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGD 297 (490)
T ss_dssp SEEEEESCHHHHHHHHHHTTT-CTTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHH
T ss_pred CEEEEECcHHHHHHHHHHhhc-cCCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHH
Confidence 999999999999999999887 78998 8999999999999999999999999999999999999999999999996 99
Q ss_pred HHHHHHHHHHhhcccCC-CCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCcccc
Q 014515 239 QFVEKANALAMKRVVGD-PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLI 317 (423)
Q Consensus 239 ~f~~~l~~~~~~~~~g~-p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~ 317 (423)
+|+++|+++++++++|+ |.|+++++||+++..+++++.+++++++++|+++++||...+..|+|++|||+. +++++++
T Consensus 298 ~f~~~l~~~~~~~~~G~~~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~-v~~~~~i 376 (490)
T 3ju8_A 298 ALLARLVAVSATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGILD-VSAVAER 376 (490)
T ss_dssp HHHHHHHHHHHHCCBCCTTCSSCCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCSTTSCCCCCEEEE-CTTCSSC
T ss_pred HHHHHHHHHHHhccCCCCCCCCcCccccccCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCCEEccEEEE-eCCCCcc
Confidence 99999999999999999 999999999999999999999999999999999999998766679999999999 9999999
Q ss_pred cccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC-CCCCCCCCCCCCCCCC
Q 014515 318 AKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV-FDAAIPFGGYKQSGQG 396 (423)
Q Consensus 318 ~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~pfgG~~~SG~g 396 (423)
++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++.. ..+.+||||+|.||.+
T Consensus 377 ~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~~~SG~~ 456 (490)
T 3ju8_A 377 PDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLTGAASSAPFGGIGASGNH 456 (490)
T ss_dssp CCCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSCSSCCCTTSEECCCGGGBSS
T ss_pred ccccccccEEEEEEeCCHHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCcCCCCCCCCcCCccccchh
Confidence 999999999999999999999999999999999999999999999999999999999999765 3578999999999974
Q ss_pred CcchHHHHHhhheeeEEEEec
Q 014515 397 REKGSYSLSNYLQVKAVVTAL 417 (423)
Q Consensus 397 ~~~g~~~l~~~~~~k~v~~~~ 417 (423)
++++|++.|+|+++.
T Consensus 457 ------~~~~~~~~k~v~~~~ 471 (490)
T 3ju8_A 457 ------RPSAYYAADYCAYPV 471 (490)
T ss_dssp ------CCEETTHHHHHEEEE
T ss_pred ------HHHhhheeEEEEEec
Confidence 589999999888775
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-86 Score=718.13 Aligned_cols=415 Identities=31% Similarity=0.507 Sum_probs=392.0
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCC-CCCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 79 (423)
+|.++|+++|+++++.|++++++|++++++|+|||..++.. |+..+++++++++.++++..+...+. ..+..++..++
T Consensus 587 ~~~~eRa~iL~~~Adll~~~~~eLa~~~~~E~GK~~~ea~~-Ev~~aid~lr~~a~~~~~~~~~~~~~~~~g~~~~~~~~ 665 (1026)
T 4f9i_A 587 TDPRTRAEYLLKAAQAARKRLFELSAWQVLEIGKQWDQAYA-DVTEAIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYE 665 (1026)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHHH-HHHHHHHHHHHHHHHHHHHTSCEEECCCTTEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHH-HHHHHHHHHHHHHHHHHHhcCCccccCCCCccceeEee
Confidence 57899999999999999999999999999999999999875 99999999999999988776544322 34567788999
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccC
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 159 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~ 159 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.||+
T Consensus 666 PlGVV~~I~PwNfPl~i~~~~~a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~ 745 (1026)
T 4f9i_A 666 PKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPD 745 (1026)
T ss_dssp ECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTT
T ss_pred cCceEEEeCCCccHHHHHHHHHHHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999988889999999999
Q ss_pred cceEeeecCchHHHHHHHHHhh-----CCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeC
Q 014515 160 VDKLAFTGSTTTGKIVLQLAAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHE 234 (423)
Q Consensus 160 v~~v~~tGs~~~~~~v~~~~a~-----~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~ 234 (423)
|+.|+||||+.+|+.|++.++. .+++|+++|+|||||+||++|||++.|++.+++|+|.|+||.|++++++|||+
T Consensus 746 v~~V~FTGSt~vg~~I~~~aa~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~ 825 (1026)
T 4f9i_A 746 ISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLD 825 (1026)
T ss_dssp EEEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEG
T ss_pred CCEEEeCCCHHHHHHHHHHhhcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecH
Confidence 9999999999999999999873 36799999999999999999999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCc
Q 014515 235 SVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDD 314 (423)
Q Consensus 235 ~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~ 314 (423)
+++|+|+++|+++++++++|+|.|+++++||+++..+++++.++|++++++| ++++||..++..|+|++|||+.+++++
T Consensus 826 ~i~d~f~~~L~~~~~~l~vG~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~~~~G~fv~PTvl~~v~~~ 904 (1026)
T 4f9i_A 826 AVYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVPAGEGYFVPMTIIGGIKPE 904 (1026)
T ss_dssp GGHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCCSSSSCCCCCEEEESCCTT
T ss_pred HHHHHHHHHHHHHHHhcccCCcccccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcCCCCCceecceeeecCCCC
Confidence 9999999999999999999999999999999999999999999999999988 999999765545999999999999999
Q ss_pred ccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC--CCCCCCCCCCC
Q 014515 315 MLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF--DAAIPFGGYKQ 392 (423)
Q Consensus 315 ~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~--~~~~pfgG~~~ 392 (423)
+++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+.++. .+.+||||+|.
T Consensus 905 ~~i~~eEiFGPVl~V~~~~d~deAI~~aN~t~yGLt~~V~t~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~~PFGG~k~ 984 (1026)
T 4f9i_A 905 HRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARM 984 (1026)
T ss_dssp SGGGTSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECCCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCCGG
T ss_pred ccccCceecCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEECCCHHHHHHHHHhCCEeeEEEcCCCCCCCCCCCCCCCcCc
Confidence 9999999999999999999999999999999999999999999999999999999999999997643 47799999999
Q ss_pred CCCC-CcchHHHHHhhheeeEEEEec
Q 014515 393 SGQG-REKGSYSLSNYLQVKAVVTAL 417 (423)
Q Consensus 393 SG~g-~~~g~~~l~~~~~~k~v~~~~ 417 (423)
||+| +.+|++++++|++.|+|+++.
T Consensus 985 SG~G~~~gG~~~l~~f~~~k~v~~~~ 1010 (1026)
T 4f9i_A 985 SGVGTKAGGPDYLLHFMDPRVVTENT 1010 (1026)
T ss_dssp GBSSCCBTSTTTGGGGEEEEEEEEEC
T ss_pred CCCCCCcCCHHHHHHhceEEEEEEec
Confidence 9999 478999999999999998875
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-85 Score=677.89 Aligned_cols=411 Identities=25% Similarity=0.340 Sum_probs=372.4
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCcc-------CCCC--CC
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT-------APAD--GP 71 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~-------~~~~--~~ 71 (423)
+|.++|.++|+++++.|++++++|++++++|+|||..++.. |+..+++.+++++.+.+++.+.. .+.. ..
T Consensus 63 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~ 141 (534)
T 2y53_A 63 LTYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSAV-DIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRS 141 (534)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSS
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCc
Confidence 57899999999999999999999999999999999999875 99999999999998876654311 1211 11
Q ss_pred CceeEeeccc-eeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcC-CCCCcEEEEeCCchh
Q 014515 72 YHVQTLHEPI-GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPT 149 (423)
Q Consensus 72 ~~~~~~~~P~-Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag-~P~g~v~~v~~~~~~ 149 (423)
...+..++|+ |||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++| +|+|++|+++|++.+
T Consensus 142 ~~~~~~~~P~~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~~ 221 (534)
T 2y53_A 142 FSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAG 221 (534)
T ss_dssp EEEEEEEEECSSCEEEECCTTCTTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCTT
T ss_pred ccceEEEecCCCEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChHH
Confidence 2357889997 99999999999999999999999999999999999999999999999999999 899999999986544
Q ss_pred HHHHhhcccCcceEeeecCchHHHHHHHHHh-hCCCCceEEecCCcceEEEcCCC-----CHHHHHHHHHHHHHhccCCc
Q 014515 150 AGAALASHMEVDKLAFTGSTTTGKIVLQLAA-KSNLKPVTLELGGKSPFIVCEDA-----DVDKAAELAHYALFFNQGQC 223 (423)
Q Consensus 150 ~~~~l~~~~~v~~v~~tGs~~~~~~v~~~~a-~~~~~~~~~e~gg~~~~iv~~~a-----d~~~aa~~iv~~~~~~~Gq~ 223 (423)
++..| +++|+|+||||+.+|+.|++.++ ..++||+++|+|||||+||++|| |++.|++.+++++|.|+||.
T Consensus 222 l~~~l---~~vd~V~FTGS~~~G~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~ 298 (534)
T 2y53_A 222 LLDQI---RSFDVVSFTGSADTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQK 298 (534)
T ss_dssp SGGGC---CTTCEEEEESCHHHHHHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCC
T ss_pred HHhcc---cccCEEEEECCHHHHHHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCc
Confidence 33322 57999999999999999998764 23789999999999999999999 99999999999999999999
Q ss_pred ccCCCeEEEeCccHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC------
Q 014515 224 CCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG------ 297 (423)
Q Consensus 224 C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~------ 297 (423)
|+++++||||++++|+|+++|+++++++++|+|.|+++++||++++.++++++++|+++ .+|+++++||....
T Consensus 299 C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~ 377 (534)
T 2y53_A 299 CTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDADA 377 (534)
T ss_dssp TTSEEEEEEEGGGHHHHHHHHHHHHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCT
T ss_pred ccCCCEEEEeccHHHHHHHHHHHHHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccccccccC
Confidence 99999999999999999999999999999999999999999999999999999999999 68999999997421
Q ss_pred CCCceeecEEEecCCCc--ccccccccccCeeEEEecC---CH-----HHHHHHHhcCCCCceEEEecCCHHHHHHHHHh
Q 014515 298 AKGYYIKPTVFTGVKDD--MLIAKDEIFGPVQSILKYK---DL-----DEVIQRSNASQYGLAAGVFTHNLDTANTLMRA 367 (423)
Q Consensus 298 ~~g~~~~Ptvl~~~~~~--~~~~~~E~fgPvl~v~~~~---~~-----~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~ 367 (423)
..|+|++|||+.+++++ +++++||+||||++|++|+ |+ ||||+++|+++|||++||||+|.+++++++++
T Consensus 378 ~~g~~~~PTvl~~v~~~~~~~i~~eEiFGPVl~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~ 457 (534)
T 2y53_A 378 NIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALE 457 (534)
T ss_dssp TTSCCCCCEEEECSCGGGCSSTTTCCCSSSEEEEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHHHH
T ss_pred CCCceecCEEEEecCccccCHHHhCCCcCCEEEEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHH
Confidence 35899999999999887 5899999999999999999 99 99999999999999999999999999999999
Q ss_pred c--ceeEEEEcCcCC---------CCCCCCCCCCCCCCCCCc-chHHHHHhhheeeEEEEe
Q 014515 368 L--RVGSVWINCFDV---------FDAAIPFGGYKQSGQGRE-KGSYSLSNYLQVKAVVTA 416 (423)
Q Consensus 368 l--~~g~v~iN~~~~---------~~~~~pfgG~~~SG~g~~-~g~~~l~~~~~~k~v~~~ 416 (423)
+ ++|+|+||++.. ..+.+||||+|.||+|++ +|.+++++|++.|++...
T Consensus 458 l~~~aG~V~vN~~~~~~~~~~~~~~~~~~pfGG~k~SG~Gr~~~g~~~l~~~~~~k~v~~~ 518 (534)
T 2y53_A 458 LADSHGRVHAISPSVQHSQTGHGNVMPMSLHGGPGRAGGGEELGGLRALAFYHRRSAIQAA 518 (534)
T ss_dssp HTTTEEEEEEECGGGTTTCCCSSCCCTTSEECCSGGGCSCCEESGGGGGGGGEEEEEEEEE
T ss_pred HHhhCCEEEEcCCcccccccccCCCCCCCCCCCcccCCCCCCcchHHHHHHHhhhheeecC
Confidence 9 899999998642 357899999999999999 699999999999998764
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-84 Score=697.78 Aligned_cols=410 Identities=30% Similarity=0.449 Sum_probs=384.4
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCcc--CCCCCCCceeEee
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT--APADGPYHVQTLH 78 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 78 (423)
+|.++|+++|+++++.|+++.++|++++++|+|||..++.. |+..+++.+++++.+.++..+.. .+...+...+..+
T Consensus 569 ~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~~-Ev~~ai~~lr~~a~~a~~~~g~~~~~~~~~g~~~~~~~ 647 (1001)
T 3haz_A 569 TPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDALS-ELREAADFCRYYAAQGRKLFGSETAMPGPTGESNALTM 647 (1001)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHSSCEECCCCTTEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHH-HHHHHHHHHHHHHHHHHhhcCccccccCCCCCceEEEE
Confidence 57899999999999999999999999999999999999875 99999999999999888766543 3344567788999
Q ss_pred ccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhccc
Q 014515 79 EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHM 158 (423)
Q Consensus 79 ~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~ 158 (423)
+|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|++.+ +..|+.||
T Consensus 648 ~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~eAGlP~gvv~vV~G~g~~-g~~L~~~p 726 (1001)
T 3haz_A 648 RGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAGIPKSALYLVTGDGRI-GAALTAHP 726 (1001)
T ss_dssp EECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHHTCCTTTEEECCCCHHH-HHHHHHCT
T ss_pred eCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHHHhCcCcCcEEEEecCchH-HHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999997777 99999999
Q ss_pred CcceEeeecCchHHHHHHHHHhhC--CCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCcc
Q 014515 159 EVDKLAFTGSTTTGKIVLQLAAKS--NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 236 (423)
Q Consensus 159 ~v~~v~~tGs~~~~~~v~~~~a~~--~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~ 236 (423)
+|+.|+||||+.+|+.|++.++++ .++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++
T Consensus 727 ~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa~~iv~s~f~naGQ~C~A~~rllV~e~i 806 (1001)
T 3haz_A 727 DIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVVTSAFRSAGQRCSALRLLFVQEDV 806 (1001)
T ss_dssp TCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHH
T ss_pred CcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHHHHHHHHHHhCCCCCCCCCceeeccHHH
Confidence 999999999999999999998863 479999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCccc
Q 014515 237 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDML 316 (423)
Q Consensus 237 ~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~ 316 (423)
+|+|+++|+++++++++|+|.++++++||+++..+++++.++|++++++| ++ +||..+ ..|+|+.|||+.. +++.
T Consensus 807 ~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g-~v-~gg~~~-~~G~fv~PTvl~~--~~~~ 881 (1001)
T 3haz_A 807 ADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEA-RL-HFAGPA-PEGCFVAPHIFEL--TEAG 881 (1001)
T ss_dssp HHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EE-EEECCC-CSSSCCCCEEEEC--SSGG
T ss_pred HHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcC-eE-eccccC-CCCcEEeeEEecC--CCHH
Confidence 99999999999999999999999999999999999999999999999888 88 888754 3599999999974 6788
Q ss_pred ccccccccCeeEEEecCC--HHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC--CCCCCCCCCCC
Q 014515 317 IAKDEIFGPVQSILKYKD--LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF--DAAIPFGGYKQ 392 (423)
Q Consensus 317 ~~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~--~~~~pfgG~~~ 392 (423)
+++||+||||++|++|++ +||||+++|+++|||+++|||+|.++++++++++++|+|+||+.+.. .+.+||||+|.
T Consensus 882 ~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a~~l~aG~V~VN~~~~~~~~~~~PFGG~k~ 961 (1001)
T 3haz_A 882 QLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIYVNRNMIGAVVGVQPFGGNGL 961 (1001)
T ss_dssp GCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCCGG
T ss_pred HHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHhCCeeeEEEeCCCcCCCCCCCCCCCccc
Confidence 999999999999999996 89999999999999999999999999999999999999999997643 35789999999
Q ss_pred CCCC-CcchHHHHHhhheeeEEEEec
Q 014515 393 SGQG-REKGSYSLSNYLQVKAVVTAL 417 (423)
Q Consensus 393 SG~g-~~~g~~~l~~~~~~k~v~~~~ 417 (423)
||+| +++|++++++|++.|+|+++.
T Consensus 962 SG~G~~~gG~~gl~~ft~~K~v~~~~ 987 (1001)
T 3haz_A 962 SGTGPKAGGPHYLARFATEQTVTINT 987 (1001)
T ss_dssp GBCCCCBTSTTSGGGGEEEEEEEEEC
T ss_pred CcCCCCCCCHHHHHHhceeeEEEECC
Confidence 9999 578999999999999998874
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-81 Score=638.88 Aligned_cols=398 Identities=20% Similarity=0.306 Sum_probs=361.1
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhh--hcCccC----CC--CCC-
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK--IQGLTA----PA--DGP- 71 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~--~~~~~~----~~--~~~- 71 (423)
+|.++|.++|+++++.|++++++|++++++|+|||..++.. |+..+++.+++++..+++ ...... +. ..+
T Consensus 49 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (510)
T 1ez0_A 49 LNNSKRASLLRTIASELEARSDDIIARAHLETALPEVRLTG-EIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPK 127 (510)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCB
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHhCccccccccccccccCCCCC
Confidence 57899999999999999999999999999999999988764 999999999999988765 322211 11 111
Q ss_pred CceeEeeccceeEEEEccCchhHHhH--HHhhhhhhccCCeEEEeCCCCchHHHHHHHHHH----HHcCCCCCcEEEEeC
Q 014515 72 YHVQTLHEPIGVAGQIIPWNFPLLMF--AWKVGPALACGNTIVLKTAEQTPLSALYVSKLL----HEAGLPPGVLNIVSG 145 (423)
Q Consensus 72 ~~~~~~~~P~Gvv~~i~p~n~P~~~~--~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l----~~ag~P~g~v~~v~~ 145 (423)
...+.+++|+|||++|+|||||+... .+++++||++||+||+|||+.+|.++..+.+++ .++|+|+|++|+++|
T Consensus 128 ~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g 207 (510)
T 1ez0_A 128 PDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQG 207 (510)
T ss_dssp CCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECC
T ss_pred CCceEEEecCcEEEEECCccchhhhhhhHHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeC
Confidence 23578999999999999999999985 499999999999999999999999999999988 567999999999999
Q ss_pred CchhHHHHhhcccCcceEeeecCchHHHHHHHHHhhCCC--CceEEecCCcceEEEcCCCCHH--HHHHHHHHHHHhccC
Q 014515 146 YGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL--KPVTLELGGKSPFIVCEDADVD--KAAELAHYALFFNQG 221 (423)
Q Consensus 146 ~~~~~~~~l~~~~~v~~v~~tGs~~~~~~v~~~~a~~~~--~~~~~e~gg~~~~iv~~~ad~~--~aa~~iv~~~~~~~G 221 (423)
.+.+.++.|+.||+||+|+||||+.+|+.|++.+++ ++ +|+++|+|||||+||++|||++ .|++.+++++|.|+|
T Consensus 208 ~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~-~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~G 286 (510)
T 1ez0_A 208 NQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHE-RPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCG 286 (510)
T ss_dssp SCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHH-SSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGG
T ss_pred CcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHHHhhc-cCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCC
Confidence 778899999999999999999999999999999987 54 9999999999999999999999 999999999999999
Q ss_pred CcccCCCeEEEeCc-cHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHh-CCCEEEeCCcccCCC
Q 014515 222 QCCCAGSRTFVHES-VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVD-GGAKLETGGERLGAK 299 (423)
Q Consensus 222 q~C~a~~~v~V~~~-~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~-~ga~~~~gg~~~~~~ 299 (423)
|.|+++++||||++ ++|+|+++|+++++++++ ||++++.+.+++.++++++++ +|+++++||. .
T Consensus 287 Q~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~----------gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~----~ 352 (510)
T 1ez0_A 287 QFCTKPGVVFALNTPETQAFIETAQSLIRQQSP----------STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA----E 352 (510)
T ss_dssp CCTTCCCEEEEESSHHHHHHHHHHHHHHHHCCC----------BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC----C
T ss_pred CCcCCCCEEEEeCCccHHHHHHHHHHHHHhcCC----------CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC----C
Confidence 99999999999999 999999999999998764 688999999999999999984 7999999997 2
Q ss_pred CceeecEEEecCCCc---ccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCH--HHHHHHHHhc--ceeE
Q 014515 300 GYYIKPTVFTGVKDD---MLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNL--DTANTLMRAL--RVGS 372 (423)
Q Consensus 300 g~~~~Ptvl~~~~~~---~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~--~~~~~~~~~l--~~g~ 372 (423)
|+|++|||+.+++++ +++++||+||||++|++|+|+||||+++|+++|||++||||+|. ++++++++++ ++|+
T Consensus 353 g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~v~~~~~~deai~~aN~~~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~ 432 (510)
T 1ez0_A 353 SPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGR 432 (510)
T ss_dssp TTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEE
T ss_pred CCEecCEEEEecCCccccCHHHcCCccCCeEEEEEeCCHHHHHHHHhcCCCCeEEEEEccCcCHHHHHHHHHHHhhcccE
Confidence 899999999887777 99999999999999999999999999999999999999999987 7999999999 7999
Q ss_pred EEEcCcCC---CCCCCCCCC-CCCCCCCC--cchHHHHHhhheeeEEE
Q 014515 373 VWINCFDV---FDAAIPFGG-YKQSGQGR--EKGSYSLSNYLQVKAVV 414 (423)
Q Consensus 373 v~iN~~~~---~~~~~pfgG-~~~SG~g~--~~g~~~l~~~~~~k~v~ 414 (423)
|+||+++. ..+.+|||| +|.||+|+ ++|.+|+++|++.|++.
T Consensus 433 V~iN~~~~~~~~~~~~pfGG~~~~sG~g~~~~~G~~gl~~~~~~k~~~ 480 (510)
T 1ez0_A 433 LVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVGAEAIHRWLRPVAYQ 480 (510)
T ss_dssp EEESSCSSCCCCSSSCCCCCSTTSCSCSSCCSSSGGGGGGGEEEEEEE
T ss_pred EEECCCCccCccCCCCCCCCCCCCcCCCCCCCccHHHHHHhheEEEEc
Confidence 99998764 457899999 79999985 47999999999998753
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-81 Score=643.67 Aligned_cols=402 Identities=23% Similarity=0.320 Sum_probs=363.6
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhh--cCccC----CC---CCC
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI--QGLTA----PA---DGP 71 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~--~~~~~----~~---~~~ 71 (423)
+|.++|.++|+++++.|++++++|++++++|+|||..++.. |+..+++.+++++..+++. ..... +. ..+
T Consensus 82 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (528)
T 3v4c_A 82 SSRKERAAFLRAIADEIEARAEAITEIGSQETGLPEARLNG-ERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPR 160 (528)
T ss_dssp CCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCB
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHhhccccccccccccccccCCCC
Confidence 57899999999999999999999999999999999999875 9999999999999888662 22211 11 123
Q ss_pred CceeEeeccceeEEEEccCchhHHhHH--HhhhhhhccCCeEEEeCCCCchHHHHHHHHHH----HHcCCCCCcEEEEeC
Q 014515 72 YHVQTLHEPIGVAGQIIPWNFPLLMFA--WKVGPALACGNTIVLKTAEQTPLSALYVSKLL----HEAGLPPGVLNIVSG 145 (423)
Q Consensus 72 ~~~~~~~~P~Gvv~~i~p~n~P~~~~~--~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l----~~ag~P~g~v~~v~~ 145 (423)
...+..++|+|||++|+|||||+...+ +++++||++||+||+|||+.+|.++..+++++ .++|+|+|++|+++|
T Consensus 161 ~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g 240 (528)
T 3v4c_A 161 QEIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQG 240 (528)
T ss_dssp CCEEEEEEECSCEEEECCSSSTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECC
T ss_pred CcceeEeeCCcEEEEECCCcchHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeC
Confidence 456889999999999999999999865 89999999999999999999999999998875 468999999999999
Q ss_pred CchhHHHHhhcccCcceEeeecCchHHHHHHHHHhhCCC--CceEEecCCcceEEEcCCC---CHHHHHHHHHHHHHhcc
Q 014515 146 YGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL--KPVTLELGGKSPFIVCEDA---DVDKAAELAHYALFFNQ 220 (423)
Q Consensus 146 ~~~~~~~~l~~~~~v~~v~~tGs~~~~~~v~~~~a~~~~--~~~~~e~gg~~~~iv~~~a---d~~~aa~~iv~~~~~~~ 220 (423)
.+.+.++.|+.||+||.|+||||+.+|+.|++.+++ ++ +|+++|+|||||+||++|| |++.|++.+++++|.|+
T Consensus 241 ~~~~~g~~L~~~p~v~~V~fTGS~~~G~~i~~~aa~-~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~ 319 (528)
T 3v4c_A 241 GSRDVGHALVQHPHIKAVGFTGSLAGGRALFDLCAA-RPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGA 319 (528)
T ss_dssp CCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHH-SSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred CCHHHHHHHHhCCCCCEEEEECChHHHHHHHHHHhh-ccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcC
Confidence 888899999999999999999999999999999987 77 8999999999999999999 88999999999999999
Q ss_pred CCcccCCCeEEEeCc-cHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCC
Q 014515 221 GQCCCAGSRTFVHES-VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAK 299 (423)
Q Consensus 221 Gq~C~a~~~v~V~~~-~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~ 299 (423)
||.|+++++||||++ ++|+|+++|++++++++.| +.+||+++..+.+++.++++ ++|+++++||.. .
T Consensus 320 GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~~------~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~~---~ 387 (528)
T 3v4c_A 320 GQFCTNPGIAVVIEGADADRFTTAAVEALAKVAPQ------TMLTDGIAKAYRDGQARFAT---RNAVKPLLATES---S 387 (528)
T ss_dssp GCCTTCCCEEEEESSHHHHHHHHHHHHHHHTCCCE------ECSCHHHHHHHHHHHHHHHT---CTTCEEEECCCC---C
T ss_pred CCccccCcEEEEecccHHHHHHHHHHHHHHhcccC------CCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCCc---C
Confidence 999999999999997 9999999999999988654 57899998888887777764 479999999974 6
Q ss_pred CceeecEEEecCCCc---ccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecC--CHHHHHHHHHhcc--eeE
Q 014515 300 GYYIKPTVFTGVKDD---MLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH--NLDTANTLMRALR--VGS 372 (423)
Q Consensus 300 g~~~~Ptvl~~~~~~---~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~--d~~~~~~~~~~l~--~g~ 372 (423)
|+|++|||+.+++++ |++++||+||||++|++|+|+||||+++|+++|||++||||+ |.+++++++++++ +|+
T Consensus 388 g~~~~PTvl~~~~~~~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a~~l~~~aG~ 467 (528)
T 3v4c_A 388 GRDASPNLFETTGAQFLADHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGR 467 (528)
T ss_dssp TTEECCEEEEEEHHHHHHCGGGGCCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHHHHHHHHEEE
T ss_pred CceeccEEEEecCcccccChhhcccccCCeEEEEecCCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHHHHHhhcCcE
Confidence 899999999988777 899999999999999999999999999999999999999999 8999999999998 999
Q ss_pred EEEcCcCC---CCCCCCCCC-CCCCCCCCcc--hHHHHHhhheeeEEEEec
Q 014515 373 VWINCFDV---FDAAIPFGG-YKQSGQGREK--GSYSLSNYLQVKAVVTAL 417 (423)
Q Consensus 373 v~iN~~~~---~~~~~pfgG-~~~SG~g~~~--g~~~l~~~~~~k~v~~~~ 417 (423)
|+||++++ ..+.+|||| +|.||+|+++ |++|+++|++.|++ .++
T Consensus 468 V~vN~~~~~~~~~~~~pfGG~~~~Sg~gr~~~~G~~gl~~~~~~k~~-q~~ 517 (528)
T 3v4c_A 468 VLVNGFPTGVEVVDSMVHGGPYPASTNFGATSVGTMSIRRFLRPVAY-QNM 517 (528)
T ss_dssp EEESSCTTCCCCSTTCCCCCTTTTBSCTTCCSSSGGGGGGGEEEEEE-ESC
T ss_pred EEEcCCCCCCccCCCCCCCCCCCCCCCCCCCCCcHHHHHHhchhHHh-hcC
Confidence 99999764 357899999 9999999975 99999999999874 443
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-76 Score=597.54 Aligned_cols=393 Identities=15% Similarity=0.208 Sum_probs=345.9
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcC-ccCCCCCCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG-LTAPADGPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||..++...+...+++.+ ..++..... ...+.+.+...+..++
T Consensus 31 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~ 107 (464)
T 3k9d_A 31 MSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHV---YNYIKDMKTIGMLKEDNEKKVMEVAV 107 (464)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHH---HHHHTTCCCSEEEEEETTTTEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHH---HHhhhcccccceeccCCCceeEEEEe
Confidence 578999999999999999999999999999999998886543444444433 333322211 1112234567889999
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHH----HHHHHcCCCCCcEEEEeCCchhHHHHhh
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVS----KLLHEAGLPPGVLNIVSGYGPTAGAALA 155 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~----~~l~~ag~P~g~v~~v~~~~~~~~~~l~ 155 (423)
|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..++ +++.++|+|+|+++++++++.+.++.|+
T Consensus 108 P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~~~~~aG~P~gvv~vv~g~~~~~~~~L~ 187 (464)
T 3k9d_A 108 PLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGCPKGAISCMTVPTIQGTDQLM 187 (464)
T ss_dssp ECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHHHHHTTCCTTSEEECSSCCHHHHHHHH
T ss_pred cceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCCHHHHHHHH
Confidence 999999999999999999999999999999999999999999999865 4568899999999999998888999999
Q ss_pred cccCcceEeeecCchHHHHHHHHHhhCCCCceEEecC-CcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeC
Q 014515 156 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELG-GKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHE 234 (423)
Q Consensus 156 ~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~g-g~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~ 234 (423)
.||+||.|+||||+.+ .+.++. ++||+ +|+| ||+|+||++|||++.|++.+++++|+|+||.|+++++||||+
T Consensus 188 ~~~~vd~I~fTGs~~v----~~~a~~-~~kpv-lelG~G~~p~iV~~dADl~~Aa~~i~~~~~~n~Gq~C~a~~rvlV~~ 261 (464)
T 3k9d_A 188 KHKDTAVILATGGSAM----VKAAYS-SGTPA-IGVGPGNGPAFIERSANIPRAVKHILDSKTFDNGTICASEQSVVVER 261 (464)
T ss_dssp HCTTEEEEEECSCHHH----HHHHTT-SSSCE-EEBCCCCCEEEECTTSCHHHHHHHHHHHHTGGGGCSTTSCCEEEEEH
T ss_pred hCCCCCEEEEeCChHH----HHHHHh-cCCcE-EeeCCCCCeEEECCCCCHHHHHHHHHHHHhcCCCCCCCCCcEEEEeH
Confidence 9999999999999984 444554 78999 7887 999999999999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHHH-------hhcccCCCC-CCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecE
Q 014515 235 SVYDQFVEKANALA-------MKRVVGDPF-KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPT 306 (423)
Q Consensus 235 ~~~~~f~~~l~~~~-------~~~~~g~p~-~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Pt 306 (423)
++||+|+++|+++. +.+++|+|. ++++++||+++.++++++.++++.++.+|+++++||..
T Consensus 262 ~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~~~~a~~~ga~vl~gg~~----------- 330 (464)
T 3k9d_A 262 VNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAGLTVPADARVLIAEET----------- 330 (464)
T ss_dssp HHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHHTTCCCCTTCCEEEEECC-----------
T ss_pred HHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHHhhhhhcCCCEEEEcCCC-----------
Confidence 99999999999875 467889887 78899999999999999999999988899999999863
Q ss_pred EEecCCCcccccccccccCeeEEEecCCHHHHH----HHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC--
Q 014515 307 VFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVI----QRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV-- 380 (423)
Q Consensus 307 vl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai----~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~-- 380 (423)
++++++++. +|+||||++|++|+|+|||| +++|+++|||++||||+|.++++++++++++|+|+||++..
T Consensus 331 ---~v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~t~d~~~a~~~~~~l~~G~v~vN~~~~~~ 406 (464)
T 3k9d_A 331 ---KVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFALKKPVSRLLVNTPGALG 406 (464)
T ss_dssp ---CCSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHSSEEEEEESSCHHHH
T ss_pred ---CCCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHhCCEeEEEEECCcccc
Confidence 356677754 89999999999999999997 79999999999999999999999999999999999999764
Q ss_pred -------CCCCCCCCCCCCCCCCCcchHHHHHhhheeeEEEEecC
Q 014515 381 -------FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 418 (423)
Q Consensus 381 -------~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~v~~~~~ 418 (423)
..+.+|||| |.+|.|.++|..|+++|++.|+|..+.+
T Consensus 407 ~~g~~~~~~~~~~~G~-G~~G~g~~~~~~~~~~~~~~k~v~~~~~ 450 (464)
T 3k9d_A 407 GIGATTNLVPALTLGC-GAVGGSSSSDNIGPENLFNIRRIATGVL 450 (464)
T ss_dssp HTTSSSSSCCCSCBBC-TGGGTCSCCSBCCGGGSEEEEEEEECCC
T ss_pred ccccCCCCCccccccC-cCCCCCcCCCCCCHHHheEEEEEEecCC
Confidence 468899998 7899999999999999999999988764
|
| >1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-77 Score=605.41 Aligned_cols=377 Identities=17% Similarity=0.186 Sum_probs=306.7
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCCh----hhhhhchHHH-HHHHHHHHHHHhhhhc------CccCCC-
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPF----EQSAQTEVPM-TTRLFRYYAGWADKIQ------GLTAPA- 68 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~----~~~~~~ev~~-~~~~l~~~~~~~~~~~------~~~~~~- 68 (423)
+|.++|.++|+++++.|+++.++|++++++|+|||. .++...|+.. ++..+++++.+++... +...+.
T Consensus 33 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a~~~~~~~~~~~~~g~~~~~~ 112 (468)
T 1vlu_A 33 ISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQGIKDVAELEDPVGKVKMAR 112 (468)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHHHHHHHHSCCSSSCEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHHHHHHHHhhcCCCCCeecccc
Confidence 578999999999999999999999999999999998 7775458888 8888999888776654 332221
Q ss_pred --CCCCceeEeeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHH----H----cCCCCC
Q 014515 69 --DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH----E----AGLPPG 138 (423)
Q Consensus 69 --~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~----~----ag~P~g 138 (423)
+.+...+..++|+|||++|+||| | ...++++++||++||+||+|||+.+|.++..+.+++. + +|+|+|
T Consensus 113 ~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aL~e~~~~aGlP~g 190 (468)
T 1vlu_A 113 ELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETGVPVG 190 (468)
T ss_dssp EEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHHHHHHHHHHHHHHHCCCTT
T ss_pred cCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHHHHhhchhcCCCCC
Confidence 12345688999999999999999 9 9999999999999999999999999999999999995 8 899999
Q ss_pred cEEEEeCCchhHHHHhhcccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHh
Q 014515 139 VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFF 218 (423)
Q Consensus 139 ~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~ 218 (423)
++|+++ ++++.++.|..||+||.|+||||+.+|+.|++.+ ++|+++|+|||||+||++|||++.|++.+++++|.
T Consensus 191 vv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a----~kpv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~ 265 (468)
T 1vlu_A 191 SVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT----KIPVLGHADGICSIYLDEDADLIKAKRISLDAKTN 265 (468)
T ss_dssp SEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC----CSCBTTBCSCCEEEEECTTCCHHHHHHHHHHTTCC
T ss_pred cEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc----CCCEEeecCCccceEECCCCCHHHHHHHHHHHhcC
Confidence 999999 6667899999999999999999999999998764 68999999999999999999999999999999999
Q ss_pred ccCCcccCCCeEEEeCccHHHHHHHHHHHHhhccc---CCCCCCCCcccCCCCHHHHHHHHHH-HHHHHhCCCEEEeCCc
Q 014515 219 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV---GDPFKGGIQQGPQIDSEQFEKILKY-IRSGVDGGAKLETGGE 294 (423)
Q Consensus 219 ~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~---g~p~~~~~~~gp~~~~~~~~~~~~~-i~~a~~~ga~~~~gg~ 294 (423)
|+| .|+++++||||+++ |+|+++|+++++++++ |+|.+ +++ +++++ ++++||+
T Consensus 266 n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~-----------------~~~~i~~a~----~~~~gG~ 322 (468)
T 1vlu_A 266 YPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL-----------------KTAYFDKLN----ELGKLTE 322 (468)
T ss_dssp -----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH-----------------HHHHHHHHH----HHTCCCH
T ss_pred CCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH-----------------hcccccccc----eeeccCC
Confidence 999 99999999999999 9999999999999987 87643 345 66654 3566775
Q ss_pred ccCCCCceeecEEEecCCCcccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEE
Q 014515 295 RLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVW 374 (423)
Q Consensus 295 ~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~ 374 (423)
| +.||++ +++++.+++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+
T Consensus 323 -----g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~ 393 (468)
T 1vlu_A 323 -----A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVY 393 (468)
T ss_dssp -----H--HHTTBC---------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHHHHHHHHHHCCCSEEE
T ss_pred -----C--CCCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhCCeeEEE
Confidence 4 689987 6789999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCcCCCCCCCCCC-----CCCCCCCCCcchHHHHHhhheeeEEEEec
Q 014515 375 INCFDVFDAAIPFG-----GYKQSGQGREKGSYSLSNYLQVKAVVTAL 417 (423)
Q Consensus 375 iN~~~~~~~~~pfg-----G~~~SG~g~~~g~~~l~~~~~~k~v~~~~ 417 (423)
||++....+.+||| |+|.||+|++ |.+|+++|++.|+|+++.
T Consensus 394 vN~~~~~~~~~pfG~Gg~~G~~~SG~g~~-G~~gl~~f~~~K~v~~~~ 440 (468)
T 1vlu_A 394 WNASTRFADGFRYGFGAEVGISTSKIHAR-GPVGLDGLVSYQYQIRGD 440 (468)
T ss_dssp ESSCGGGCC-----------------------CCSGGGEEEEEEEECS
T ss_pred EcCCCCCCCCCCCCCCCCcceecCCCCCC-cchHHHHhcceEEEEECC
Confidence 99987777889999 9999999999 999999999999998763
|
| >2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-75 Score=587.43 Aligned_cols=366 Identities=20% Similarity=0.198 Sum_probs=314.7
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHc-------CCChh----hhhhchHHHHHHHHHHHHHHhhhhcCccCCCC
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDN-------GKPFE----QSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD 69 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~-------Gk~~~----~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~ 69 (423)
+|.++|.++|+++++.|+++.++|++++++|+ |||+. ++. .|+..+++.+++++.++++..+...+..
T Consensus 48 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~Gk~~~~rl~~a~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~ 126 (463)
T 2h5g_A 48 LEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAAPLLKRLSLST-SKLNSLAIGLRQIAASSQDSVGRVLRRT 126 (463)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSCHHHHHTTCCCH-HHHHHHHHHHHHHHHHCTTSTTCEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCCCchhhhhhhhH-HHHHHHHHHHHHHHHhhHhhcCcccccc
Confidence 57899999999999999999999999999999 79987 344 5999999999999987766655442211
Q ss_pred ---CCCceeEeeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHc----CCCCCcEEE
Q 014515 70 ---GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNI 142 (423)
Q Consensus 70 ---~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~a----g~P~g~v~~ 142 (423)
.+...++.++|+|||++|+||| |.+.. +++++||++||+||+|||+.+|.++..|.+++.++ | |+|++++
T Consensus 127 ~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~v 203 (463)
T 2h5g_A 127 RIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIASGNGLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQL 203 (463)
T ss_dssp EEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHHHTCEEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEE
T ss_pred cCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHHcCCEEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEE
Confidence 2445688999999999999777 77766 79999999999999999999999999999999999 8 9999999
Q ss_pred EeCCchhHHHHhhcccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCC
Q 014515 143 VSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQ 222 (423)
Q Consensus 143 v~~~~~~~~~~l~~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq 222 (423)
++| +.++++.|+.||+||+|+||||+.+|+.|++.++ ++|+++|+|||||+||++|||++.|++.+++++|.| ||
T Consensus 204 v~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa---l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ 278 (463)
T 2h5g_A 204 VNT-REEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK---GIPVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PA 278 (463)
T ss_dssp CCT-TCCC-------CCCSEEEEESCHHHHHHHHHHCS---SSCBCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TT
T ss_pred EcC-CHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC---CCCEEEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CC
Confidence 998 7778999999999999999999999999999876 799999999999999999999999999999999999 99
Q ss_pred cccCCCeEEEeCccHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCce
Q 014515 223 CCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYY 302 (423)
Q Consensus 223 ~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~ 302 (423)
.|+++++||||++++| ||+ ++ +++++++++|++++.|+.. ...++|
T Consensus 279 ~C~a~~rvlV~~~i~d-------------------------~p~-----~~---~~i~~~~~~Ga~v~~G~~~-~~~g~~ 324 (463)
T 2h5g_A 279 ACNALETLLIHRDLLR-------------------------TPL-----FD---QIIDMLRVEQVKIHAGPKF-ASYLTF 324 (463)
T ss_dssp STTSEEEEEEEGGGTT-------------------------SHH-----HH---HHHHHHHHTTCEEEECHHH-HC----
T ss_pred ccccCcEEEEeccccc-------------------------hHH-----HH---HHHHHHHhCCCEEEeCCcc-cccCcc
Confidence 9999999999999998 232 23 3577788899999855432 223444
Q ss_pred eecEEEecCCCcccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCC
Q 014515 303 IKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFD 382 (423)
Q Consensus 303 ~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~ 382 (423)
+ +++|++++||+||||++|++|+|+||||+++|++++||++||||+|.++++++++++++|.|+||++....
T Consensus 325 ~--------~~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~ 396 (463)
T 2h5g_A 325 S--------PSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSSHTDVIVTEDENTAEFFLQHVDSACVFWNASTRFS 396 (463)
T ss_dssp -------------CCSSCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGGC
T ss_pred C--------CCCchHHhccccCceEEEEEeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEeCCccCC
Confidence 2 57899999999999999999999999999999999999999999999999999999999999999987777
Q ss_pred CCCCCCCCCCCCCC--Cc--chHHHHHhhheeeEEEEec
Q 014515 383 AAIPFGGYKQSGQG--RE--KGSYSLSNYLQVKAVVTAL 417 (423)
Q Consensus 383 ~~~pfgG~~~SG~g--~~--~g~~~l~~~~~~k~v~~~~ 417 (423)
+.+||||+|+||+| ++ +|.+|+++|++.|+|+++.
T Consensus 397 ~~~PfGG~k~SG~G~~r~~~~G~~gl~~ft~~K~v~~~~ 435 (463)
T 2h5g_A 397 DGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRGK 435 (463)
T ss_dssp STTTTTSSCCSCEECCSSSCCEECCGGGGEEEEEEEECS
T ss_pred CCCCCCCCccCcCCCCcccCCCHHHHHHhceeEEEEECC
Confidence 88999999999999 65 9999999999999998764
|
| >4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-74 Score=578.08 Aligned_cols=369 Identities=20% Similarity=0.229 Sum_probs=314.0
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCCh----hhhhh-------chHHHHHHHHHHHHHHhhhhcCccCC--
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPF----EQSAQ-------TEVPMTTRLFRYYAGWADKIQGLTAP-- 67 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~----~~~~~-------~ev~~~~~~l~~~~~~~~~~~~~~~~-- 67 (423)
+|.++|.++|+++++.|+++.++|++++++|+||+. .++.. .|+..+++.+++++.+.+.. +...+
T Consensus 45 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~~~~l~~~a~~~~~~-g~~~~~~ 123 (444)
T 4ghk_A 45 ASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVEGLRQVATLPDPI-GEMSNLK 123 (444)
T ss_dssp CCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHHHHHHHHHHHSCCCT-TCEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHHHHHHHHHHhhcccc-CccCCcc
Confidence 578999999999999999999999999999999985 34432 37888999999998876532 32222
Q ss_pred -CCCCCceeEeeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHH----HHcCCCCCcEEE
Q 014515 68 -ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLL----HEAGLPPGVLNI 142 (423)
Q Consensus 68 -~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l----~~ag~P~g~v~~ 142 (423)
...+...++.++|+|||++|+||| | ...++++++||++||+||+|||+.+|.++..+.+++ .++|+|+|++++
T Consensus 124 ~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~v 201 (444)
T 4ghk_A 124 YRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNTALAKLIGEGLAEAGLPQDTVQV 201 (444)
T ss_dssp ECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEE
T ss_pred cCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHHHHHcCCCcccEEE
Confidence 123456789999999999999998 8 688999999999999999999999999999999997 789999999999
Q ss_pred EeCCch-hHHHHhhcccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccC
Q 014515 143 VSGYGP-TAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQG 221 (423)
Q Consensus 143 v~~~~~-~~~~~l~~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~G 221 (423)
++|.+. +.++.|..||+||.|+||||+.+|+.|++.+ ++|+++|+|||||+||++|||++.|++.+++++|.|+|
T Consensus 202 v~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a----~~pv~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~G 277 (444)
T 4ghk_A 202 VETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA----RVPMIKHLDGICHVYVDDRASVTKALTVCDNAKTHRYG 277 (444)
T ss_dssp CCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----CSCBCCCCCCCCEEEECTTCCHHHHHHHCC--------
T ss_pred EeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC----CCCEEEEcCCcCeEEECCCCCHHHHHHHHHHHhcCCCc
Confidence 998554 5788888999999999999999999998764 68999999999999999999999999999999999999
Q ss_pred CcccCCCeEEEeCccHHHHHHHHHHHHhhccc---CCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCC
Q 014515 222 QCCCAGSRTFVHESVYDQFVEKANALAMKRVV---GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA 298 (423)
Q Consensus 222 q~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~---g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~ 298 (423)
.|+++++||||++++|+|+++|+++++++++ |+|. ..++++++. .
T Consensus 278 -~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~-----------------~~~~i~~a~-~------------- 325 (444)
T 4ghk_A 278 -TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDAD-----------------ARAVLEAAG-V------------- 325 (444)
T ss_dssp --CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHH-----------------HHHHHHHTT-C-------------
T ss_pred -ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHH-----------------HHHHHHhcc-c-------------
Confidence 9999999999999999999999999999888 7652 245666542 1
Q ss_pred CCceeecEEEecCCCcccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCc
Q 014515 299 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCF 378 (423)
Q Consensus 299 ~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~ 378 (423)
| ++ +++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||++
T Consensus 326 -G------~~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~ 396 (444)
T 4ghk_A 326 -G------PL--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTEDHDRAMRFLREVDSASVMVNAS 396 (444)
T ss_dssp -C------CC--EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEECSBHHHHHHHHHHCCSSEEEEEEC
T ss_pred -C------cc--cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhCCcceEEEcCC
Confidence 1 11 24578999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCCCCCCCCCCCC----CcchHHHHHhhheeeEEEEec
Q 014515 379 DVFDAAIPFGGYKQSGQG----REKGSYSLSNYLQVKAVVTAL 417 (423)
Q Consensus 379 ~~~~~~~pfgG~~~SG~g----~~~g~~~l~~~~~~k~v~~~~ 417 (423)
+...+..||||.|+||+| +++|++|+++||+.|+|++..
T Consensus 397 ~~~~~~~pfGg~~~sG~g~~~~~~~G~~gl~~~t~~K~v~~~~ 439 (444)
T 4ghk_A 397 TRFADGFEFGLGAEIGISNDKLHARGPVGLEGLTSLKYVVLGH 439 (444)
T ss_dssp GGGCSTTTTTCSCCSEEECCSSSCCEEECGGGGEEEEEEEEEE
T ss_pred CccCCCCCcCCcccccccCCcccCCChhHHHhhceEEEEEECC
Confidence 777888999999999998 688999999999999998763
|
| >1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-74 Score=574.61 Aligned_cols=367 Identities=21% Similarity=0.219 Sum_probs=323.3
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCCh----hhhhh-------chHHHHHHHHHHHHHHhhhhcCccCCC-
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPF----EQSAQ-------TEVPMTTRLFRYYAGWADKIQGLTAPA- 68 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~----~~~~~-------~ev~~~~~~l~~~~~~~~~~~~~~~~~- 68 (423)
+|.++|.++|+++++.|+++.++|++++++|+||+. .++.. .|+..+++.+++++.+.+. .+...+.
T Consensus 33 ~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~~~~l~~~a~~~~~-~g~~~~~~ 111 (427)
T 1o20_A 33 ATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMIKACETVIGLKDP-VGEVIDSW 111 (427)
T ss_dssp CCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHHHHHHHHHHSCCC-TTCEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHHHHHHHHHHhcccc-cCcccccc
Confidence 578999999999999999999999999999999985 45431 4899999999999987654 3332221
Q ss_pred --CCCCceeEeeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHH----HcCCCCCcEEE
Q 014515 69 --DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH----EAGLPPGVLNI 142 (423)
Q Consensus 69 --~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~----~ag~P~g~v~~ 142 (423)
..+...+.+++|+|||++|+||| +...++++++||++||+||+|||+.+|.++..|.+++. ++|+|+|++|+
T Consensus 112 ~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~~l~~l~~~al~eaGlP~gvv~v 189 (427)
T 1o20_A 112 VREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEF 189 (427)
T ss_dssp ECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHHTTSSSCGGGEEE
T ss_pred ccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHHHHHHHHHHHHHHcCCCcccEEE
Confidence 22445688999999999999876 47889999999999999999999999999999999998 67999999999
Q ss_pred EeCC-chhHHHHhhcccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccC
Q 014515 143 VSGY-GPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQG 221 (423)
Q Consensus 143 v~~~-~~~~~~~l~~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~G 221 (423)
++|. .++.++.|..||+||.|+||||+.+|+.|++.+ ++|+++|+|||||+||++|||++.|++.+++++|.|+|
T Consensus 190 v~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a----~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~f~n~G 265 (427)
T 1o20_A 190 IENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA----TVPVLETGVGNCHIFVDESADLKKAVPVIINAKTQRPG 265 (427)
T ss_dssp CCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----SSCBCCCCCCCEEEEECTTSCHHHHHHHHHHHHHSCTT
T ss_pred ecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc----CCCEEEecCCCceEEEeCCCCHHHHHHHHHHHhccCCC
Confidence 9984 456788999999999999999999999998875 58999999999999999999999999999999999999
Q ss_pred CcccCCCeEEEeCccHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCc
Q 014515 222 QCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY 301 (423)
Q Consensus 222 q~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~ 301 (423)
.|+++++||||++++|+|+++|++++++++++ +.||... .+
T Consensus 266 -~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~-----------------------------------~~gg~~~--~~- 306 (427)
T 1o20_A 266 -TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE-----------------------------------VRGCEKT--RE- 306 (427)
T ss_dssp -STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE-----------------------------------EEECHHH--HH-
T ss_pred -CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe-----------------------------------eecChhh--hh-
Confidence 99999999999999999999999999887642 1233221 12
Q ss_pred eeecEEEecCCCcccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC
Q 014515 302 YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF 381 (423)
Q Consensus 302 ~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~ 381 (423)
|+ |||. ++++.+++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||++...
T Consensus 307 ~~-Ptl~---~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~~ 382 (427)
T 1o20_A 307 IV-PDVV---PATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTRF 382 (427)
T ss_dssp HS-TTSE---ECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGG
T ss_pred hC-Cccc---CCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCHHHHHHHHHhCCccEEEECCCCcc
Confidence 33 8852 4578899999999999999999999999999999999999999999999999999999999999997777
Q ss_pred CCCCCCCCCCCCCCC----CcchHHHHHhhheeeEEEEec
Q 014515 382 DAAIPFGGYKQSGQG----REKGSYSLSNYLQVKAVVTAL 417 (423)
Q Consensus 382 ~~~~pfgG~~~SG~g----~~~g~~~l~~~~~~k~v~~~~ 417 (423)
.+.+||||.|+||+| +++|++|+++|++.|+|++..
T Consensus 383 ~~~~pfGg~~~SG~g~~~~~~~g~~gl~~~~~~k~v~~~~ 422 (427)
T 1o20_A 383 TDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGE 422 (427)
T ss_dssp CSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECS
T ss_pred CCCCCCCCcccccccCCcccCCChHHHHHHhceEEEEECC
Confidence 788999999999997 467999999999999998764
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-72 Score=567.19 Aligned_cols=394 Identities=17% Similarity=0.222 Sum_probs=321.9
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHH-HHHHHHhhhhcCccCCCCCCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLF-RYYAGWADKIQGLTAPADGPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|++++++|++++++|+|||..++...|+..+.+.+ ++++.. +.. ...+.+.+...+..++
T Consensus 26 ~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~~~~~~--~~~-g~~~~~~~~~~~~~~~ 102 (452)
T 3my7_A 26 YSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYNKYKDE--QTC-GILEEDDNLGTMTIAE 102 (452)
T ss_dssp CCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHTTC--CCS-EEC-------CEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhhhc--ccc-ccccCCCCCceEEEec
Confidence 578999999999999999999999999999999999998755666666655 333221 111 1122233456788999
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHH----HcCCCCCcEEEEeCCchhHHHHhh
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH----EAGLPPGVLNIVSGYGPTAGAALA 155 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~----~ag~P~g~v~~v~~~~~~~~~~l~ 155 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++. ++|+|+|+++++++++.+.++.|+
T Consensus 103 P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~a~~~aG~P~gvv~~v~g~~~~~~~~L~ 182 (452)
T 3my7_A 103 PVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQPSVELSNALM 182 (452)
T ss_dssp ECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHHHHHTTCCTTSEEECSSCCHHHHHHHH
T ss_pred CceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHHHHHHcCCCcCcEEEEcCCCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998888775 789999999999998888999999
Q ss_pred cccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCc
Q 014515 156 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES 235 (423)
Q Consensus 156 ~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~ 235 (423)
.||+|+.|+||||+.+++ .++. ++||+++|+|||+|+||++|||++.|++.+++++|+|+||.|+++++||||++
T Consensus 183 ~~p~v~~V~fTGs~~~~~----~a~~-~~kp~~~e~gG~~p~iV~~dADl~~Aa~~iv~s~~~~~GQ~C~a~~rv~V~~~ 257 (452)
T 3my7_A 183 KHDDIALILATGGPGMVK----AAYS-SGKPAIGVGAGNVPVVIDETADIKRAVASVLMSKTFDNGVVCASEQAVIVVDE 257 (452)
T ss_dssp HCTTCCEEEECSCHHHHH----HHHT-SSSCEEECC--CEEEEECTTSCHHHHHHHHHHGGGGGGGCCTTCEEEEEEEGG
T ss_pred hCCCccEEEEECcHHHHH----HHHh-cCCCEEecCCCCCeEEEeCCCCHHHHHHHHHHHHhCCCCCccCCCcEEEEcHH
Confidence 999999999999998654 3444 78999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccc---CCCCceeecEE-----
Q 014515 236 VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL---GAKGYYIKPTV----- 307 (423)
Q Consensus 236 ~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~---~~~g~~~~Ptv----- 307 (423)
+||+|+++|+++ +||++++++++++.++++++...|+++ +||... +..|+|++||+
T Consensus 258 i~d~f~~~l~~~---------------~gpli~~~~~~~v~~~i~~~~~~~a~v-~G~~~~~~~~~~G~~v~pt~~vl~~ 321 (452)
T 3my7_A 258 VYDEVKERFASH---------------KAHVLSKTDADKVRKVLLIDGALNAKI-VGQPATAIAEMAGVKVPADTKVLIG 321 (452)
T ss_dssp GHHHHHHHHHTT---------------TEEECCHHHHHHHHHHHEETTEECGGG-TTCCHHHHHHHHTCCCCTTCCEEEE
T ss_pred HHHHHHHHHHHh---------------CCCcCCHHHHHHHHHHHHhhcccCCeE-ecCccchhHHhCCceeCCCeeEEee
Confidence 999999999873 499999999999999998766667776 476532 13589999997
Q ss_pred --EecCCCcccccccccccCeeEEEecCCHHHHHHHHhcCC----CCceEEEecCCHHHHHH---HHHhcceeEEEEcCc
Q 014515 308 --FTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQ----YGLAAGVFTHNLDTANT---LMRALRVGSVWINCF 378 (423)
Q Consensus 308 --l~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~----~gl~~~v~s~d~~~~~~---~~~~l~~g~v~iN~~ 378 (423)
+.++++++++.+ |+||||++|++|+|+||||+++|++. |||+++|||+|.+++++ +++++++|+|+||++
T Consensus 322 ~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i~t~d~~~a~~i~~~a~~l~~G~V~VN~~ 400 (452)
T 3my7_A 322 EGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADRIRYFGDKMKTARILINIP 400 (452)
T ss_dssp ECSSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEESCTTTCHHHHHHHHHHCCCSEEEESCC
T ss_pred ccccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEEEcCCHHHHHHHHHHHHhCCEEEEEECCC
Confidence 667888888775 89999999999999999999999975 99999999999887777 999999999999986
Q ss_pred CCCC-----------CCCCCCCCCCCCCCCcchHHHHHhhheeeEEEEecCCC
Q 014515 379 DVFD-----------AAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKNP 420 (423)
Q Consensus 379 ~~~~-----------~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~v~~~~~~~ 420 (423)
+.+. +.+++ |++..|.+...+..+.++|.+.|+|..+.+|+
T Consensus 401 ~~~Gg~G~~~~f~~~~~~t~-g~g~~Gg~~~~~nv~~~~l~n~~~v~~~~~~~ 452 (452)
T 3my7_A 401 TTHGGIGDLYNFNVAPSLTL-GCGSWGGNSISENVGPKHLINKKTVAKRAENM 452 (452)
T ss_dssp CC-----------------------------CCCCCGGGGEEEEEEECCC---
T ss_pred CCCcccccccccCcCceEee-eccccCCCccCCCCChhHeeeeeEEEeecCCC
Confidence 5431 12233 45566666677778999999999998887763
|
| >4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus} | Back alignment and structure |
|---|
Probab=97.61 E-value=0.053 Score=52.46 Aligned_cols=265 Identities=16% Similarity=0.146 Sum_probs=147.1
Q ss_pred CCCCceeEeeccceeEEEEccC---chhHHhHHHhhhhhhccCCeEE--EeCCCCchHHHHHHHHHHHHcCCCCCcEEEE
Q 014515 69 DGPYHVQTLHEPIGVAGQIIPW---NFPLLMFAWKVGPALACGNTIV--LKTAEQTPLSALYVSKLLHEAGLPPGVLNIV 143 (423)
Q Consensus 69 ~~~~~~~~~~~P~Gvv~~i~p~---n~P~~~~~~~l~~AL~aGN~vi--~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v 143 (423)
..|.....++.|+--|++..|. .||-.. +...+||-.+|+.=| ..|++. -.....+.-+.+.+|+.+ +.
T Consensus 118 ~~G~~~g~~~~Pi~~VGlYVPGG~A~ypSsv-LM~aiPAkVAGV~~Iv~~tPp~~-G~i~p~iL~AA~l~Gv~e----Iy 191 (423)
T 4gic_A 118 ADGTLLGQKITPLDRVGLYVPGGKAAYPSSV-LMNAVPAKVAGVPELIMAVPAPR-GELNALVLAAAYISGVDR----VF 191 (423)
T ss_dssp TTSCEEEEEEEECSEEEEECCCSTTCCHHHH-HHHHHHHHHHTCSEEEEECCCGG-GCCCHHHHHHHHHHTCCE----EE
T ss_pred CCCCEEEEEEEEecceeEEeeCCCCchhhHH-HHhhccHHHhCCCeEEEecCCCC-CCccHHHHHHHHhcCCcE----EE
Confidence 3466677889999999999995 466544 445789999999733 344332 112223333445556542 33
Q ss_pred eCCchhHHHHhhc----ccCcceEeeecCchHHHHHHHHHhhCCCCceEEec-CCcce--EEEcCCCCHHHHHHHHHHHH
Q 014515 144 SGYGPTAGAALAS----HMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLEL-GGKSP--FIVCEDADVDKAAELAHYAL 216 (423)
Q Consensus 144 ~~~~~~~~~~l~~----~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~-gg~~~--~iv~~~ad~~~aa~~iv~~~ 216 (423)
.-.|...-.+|.. -|.||.|+=.|+.-+..+=.... + .|-..+ -|.+= +|-++++|.+..+..++.-+
T Consensus 192 ~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AKr~v~---g--~VgIDm~AGPSEilViAD~~a~p~~vAaDLlsQA 266 (423)
T 4gic_A 192 RIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATAKKLVF---G--QVGIDMVAGPSEILVISDGRTDPDWIAMDLFSQA 266 (423)
T ss_dssp CCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHB---T--TBEECCCCCCCEEEEEECSCSCHHHHHHHHHHHH
T ss_pred EcCChhhhhhhccCCCcccceeEEecCCcHHHHHHHHHhc---C--CcCcccccccceEEEEeCCCCCHHHHHHHHHHhh
Confidence 2224333344443 47899999999876543222211 1 122222 23332 34445689998888777655
Q ss_pred HhccCCcccCCCeEEEeCccHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccc
Q 014515 217 FFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 296 (423)
Q Consensus 217 ~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~ 296 (423)
=+.. ..+.++|..+ ++|.+++.+.+.++--. +.. .+.+.+.++
T Consensus 267 EHd~-----~a~~iLvT~s--~~la~~V~~~i~~~l~~-----------l~r---~~i~~~sl~---------------- 309 (423)
T 4gic_A 267 EHDE-----DAQAILISPD--AAHLEAVQASIERLLPG-----------MER---AEVIRTSLE---------------- 309 (423)
T ss_dssp TTCT-----TCEEEEEESC--HHHHHHHHHHHHHHGGG-----------CTT---HHHHHHHHH----------------
T ss_pred ccCC-----CCeEEEEeCc--HHHHHHHHHHHHHHHhh-----------Ccc---HHHHHHHHh----------------
Confidence 4442 2345677666 44555554444331100 000 111111111
Q ss_pred CCCCceeecEEEecCCCcccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcc-eeEEEE
Q 014515 297 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALR-VGSVWI 375 (423)
Q Consensus 297 ~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~-~g~v~i 375 (423)
-+| .++.++|++|+++++|..- +-..-|.++|+. .+..+++ +|.|++
T Consensus 310 -------------------------~~g---~ii~v~~~~ea~~~~N~~A-PEHLel~~~~~~---~~l~~i~nAGaIFl 357 (423)
T 4gic_A 310 -------------------------RRG---GMILVDDLEQAAAVANRIA-PEHLELSVESPE---VLVESIRNAGAIFM 357 (423)
T ss_dssp -------------------------HHC---EEEECSSHHHHHHHHHHHC-CSEEEEESSCHH---HHGGGCCCCSEEEE
T ss_pred -------------------------cCc---eEEEEeehHHHHHHHHhhC-hHHhhhhhCCHH---HHHhhCcEeceeec
Confidence 011 3446799999999999854 346778899975 5777775 999999
Q ss_pred cCcCCC--CCC--CCCCCCCCCCCCCcchHHHHHhhheeeEE
Q 014515 376 NCFDVF--DAA--IPFGGYKQSGQGREKGSYSLSNYLQVKAV 413 (423)
Q Consensus 376 N~~~~~--~~~--~pfgG~~~SG~g~~~g~~~l~~~~~~k~v 413 (423)
..+... ..+ .|-.=..-+|..|+.+..+++.|....++
T Consensus 358 G~~tp~~~GDY~aG~NHvLPT~G~Ar~~sgLsv~~F~K~~s~ 399 (423)
T 4gic_A 358 GRYTAEALGDYCAGPNHVLPTSGTARFSSPLGVYDFQKRSSL 399 (423)
T ss_dssp C----------------CCCCTTGGGTCCCCCGGGGEEEEEE
T ss_pred CCCCchhhhhcCcCCCccCCCCCcccccCCCCHHHeeeeeeE
Confidence 865321 111 11112345677777777788888886554
|
| >1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A | Back alignment and structure |
|---|
Probab=97.07 E-value=0.063 Score=52.05 Aligned_cols=262 Identities=18% Similarity=0.150 Sum_probs=146.9
Q ss_pred CCceeEeeccceeEEEEccC---chhHHhHHHhhhhhhccCCeEEE--eCCCCchHHHHHHHHHHHHcCCCCCcEEEEeC
Q 014515 71 PYHVQTLHEPIGVAGQIIPW---NFPLLMFAWKVGPALACGNTIVL--KTAEQTPLSALYVSKLLHEAGLPPGVLNIVSG 145 (423)
Q Consensus 71 ~~~~~~~~~P~Gvv~~i~p~---n~P~~~~~~~l~~AL~aGN~vi~--kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~ 145 (423)
|.....++.|+--|++..|. -||-. .+...+||-.+|+.=|+ .|+.-.| .+.-+.+.+|..+ |--+ |
T Consensus 114 Gv~~gq~~~Pi~rvGlYVPGG~a~ypSs-vLM~aiPAkVAGV~~Iv~~tPp~i~p----~iL~AA~l~Gv~e--Iy~v-G 185 (434)
T 1kae_A 114 GVRCQQVTRPVASVGLYIPGGSAPLFST-VLMLATPASIAGCKKVVLCSPPPIAD----EILYAAQLCGVQD--VFNV-G 185 (434)
T ss_dssp TEEEEEEEEECSEEEEECCCSSSCCTHH-HHHHHHHHHHHTCSEEEEEECSSCCH----HHHHHHHHTTCCE--EEEC-C
T ss_pred CcEEEEEEeehheEEEEecCCCCCchhH-HHHhhccHhhcCCCeEEEECCCCCCH----HHHHHHHHcCCCE--Eeec-c
Confidence 55667788999999999996 46644 44457899999987655 3432222 2333345555542 2222 2
Q ss_pred CchhHHHHhhc----ccCcceEeeecCchHHHHHHHHHhhCCCCceEEec-CCcce--EEEcCCCCHHHHHHHHHHHHHh
Q 014515 146 YGPTAGAALAS----HMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLEL-GGKSP--FIVCEDADVDKAAELAHYALFF 218 (423)
Q Consensus 146 ~~~~~~~~l~~----~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~-gg~~~--~iv~~~ad~~~aa~~iv~~~~~ 218 (423)
|...-.+|.. -|+||.|+=.|..-+..+=.. ..... ..|-..+ -|.+= +|-++++|.+..+..++.-+=+
T Consensus 186 -GAQAIAAlAyGTetIp~VDkI~GPGN~yVa~AKr~-Vs~~~-G~VgIDm~AGPSEilViAD~tAnp~~vAaDLLsQAEH 262 (434)
T 1kae_A 186 -GAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQ-VSQRL-DGAAIDMPAGPSEVLVIADSGATPDFVASDLLSQAEH 262 (434)
T ss_dssp -HHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHH-HHHCT-TSCEESCCCCCCEEEEEECTTSCHHHHHHHHHHHHTT
T ss_pred -cHHHHHHHHcCCCCCCCccEEECCCcHHHHHHHHH-hHhhc-CccccCCCCCCceEEEEeCCCCCHHHHHHHHHHHhcc
Confidence 3333333432 378999998888754332111 11101 1222222 23333 3445568999888877765544
Q ss_pred ccCCcccCCCeEEEeCccHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCC
Q 014515 219 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA 298 (423)
Q Consensus 219 ~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~ 298 (423)
.. ..+.++|-.+ +++.+++.+++.++--. +.. . +.++.+
T Consensus 263 d~-----~a~aiLvT~s--~~la~~V~~ev~~ql~~-----------lpr---~----~ia~~s---------------- 301 (434)
T 1kae_A 263 GP-----DSQVILLTPA--ADMARRVAEAVERQLAE-----------LPR---A----ETARQA---------------- 301 (434)
T ss_dssp CT-----TCEEEEEESC--HHHHHHHHHHHHHHHTT-----------CTT---H----HHHHHH----------------
T ss_pred CC-----CCcEEEEECC--HHHHHHHHHHHHHHHHh-----------CCh---H----HHHHHH----------------
Confidence 32 2345666655 44444444444321000 000 0 111111
Q ss_pred CCceeecEEEecCCCcccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhc-ceeEEEEcC
Q 014515 299 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL-RVGSVWINC 377 (423)
Q Consensus 299 ~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l-~~g~v~iN~ 377 (423)
+..- .++.++|++||++++|..-. -..-|.++|+. .++.++ ++|.|++..
T Consensus 302 ------------------------l~~~-~ii~v~~l~ea~~~~N~~AP-EHLel~~~dp~---~~l~~I~nAGaIFlG~ 352 (434)
T 1kae_A 302 ------------------------LNAS-RLIVTKDLAQCVEISNQYGP-EHLIIQTRNAR---ELVDSITSAGSVFLGD 352 (434)
T ss_dssp ------------------------HTTC-EEEECSSHHHHHHHHHHHCC-SEEEEESTTHH---HHGGGCCSCSEEEEST
T ss_pred ------------------------HHcC-eEEEECCHHHHHHHHHHhhh-HhhhhhhcCHH---HHHhhcCcccchhcCC
Confidence 1122 45678999999999998643 36788999985 666777 599999997
Q ss_pred cCCC---C-CCCCCCCCCCCCCCCcchHHHHHhhheeeEE
Q 014515 378 FDVF---D-AAIPFGGYKQSGQGREKGSYSLSNYLQVKAV 413 (423)
Q Consensus 378 ~~~~---~-~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~v 413 (423)
+... + ...|-.=..-+|..|+.+..+++.|...-++
T Consensus 353 ~tpe~~GDY~aG~NHvLPT~G~AR~~sgLsV~~F~K~~s~ 392 (434)
T 1kae_A 353 WSPESAGDYASGTNHVLPTYGYTATCSSLGLADFQKRMTV 392 (434)
T ss_dssp TCCHHHHHHTSSSCCCCCCTTGGGTCCCSCGGGGEEEEEE
T ss_pred CCchhhcccccCCCcccCCCCceeccCCCcHHhccceeeE
Confidence 6431 1 0111111334566777777788888886554
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 423 | ||||
| d1o04a_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-163 | |
| d1bxsa_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-162 | |
| d1a4sa_ | 503 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-140 | |
| d1wnda_ | 474 | c.82.1.1 (A:) Putative betaine aldehyde dehydrogen | 1e-120 | |
| d1euha_ | 474 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-100 | |
| d1uzba_ | 516 | c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogen | 7e-98 | |
| d1ad3a_ | 446 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 6e-95 | |
| d1ky8a_ | 499 | c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3 | 3e-82 | |
| d1o20a_ | 414 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 2e-49 | |
| d1ez0a_ | 504 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 2e-43 | |
| d1vlua_ | 436 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 2e-22 |
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Score = 467 bits (1202), Expect = e-163
Identities = 251/417 (60%), Positives = 306/417 (73%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
M A R +++ R ADL+ER +AALET DNGKP+ S ++ M + RYYAGWADK
Sbjct: 73 MDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADK 132
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
G T P DG + T HEP+GV GQIIPWNFPLLM AWK+GPALA GN +V+K AEQTP
Sbjct: 133 YHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTP 192
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
L+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH +VDK+AFTGST G+++ A
Sbjct: 193 LTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAG 252
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
SNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQC CAGSRTFV E +YD+F
Sbjct: 253 SSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEF 312
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 300
VE++ A A RVVG+PF +QGPQ+D QF+KIL YI +G GAKL GG +G
Sbjct: 313 VERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRG 372
Query: 301 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 360
Y+I+PTVF V+D M IAK+EIFGPV ILK+K ++EV+ R+N S YGLAA VFT +LD
Sbjct: 373 YFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDK 432
Query: 361 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 417
AN L +AL+ G+VW+NC+DVF A PFGGYK SG GRE G Y L Y +VK V +
Sbjct: 433 ANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVKV 489
|
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Score = 463 bits (1192), Expect = e-162
Identities = 238/414 (57%), Positives = 303/414 (73%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
M A ER +++ + ADL+ER +A +E + GK F + ++ + RY AGWADK
Sbjct: 73 MDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADK 132
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
IQG T P DG + T EP+GV GQIIPWNFPLLMF WK+GPAL+CGNT+V+K AEQTP
Sbjct: 133 IQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTP 192
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
L+AL++ L+ EAG PPGV+NIV GYGPTAGAA++SHM+VDK+AFTGST GK++ + A
Sbjct: 193 LTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAG 252
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
KSNLK V+LELGGKSP IV DAD+D A E AH +F++QGQCC A SR FV ES+YD+F
Sbjct: 253 KSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEF 312
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 300
V ++ A K V+G+P G+ QGPQID EQ+EKIL I SG GAKLE GG G KG
Sbjct: 313 VRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKG 372
Query: 301 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDT 360
Y+I+PTVF+ V DDM IAK+EIFGPVQ I+K+K LD+VI+R+N + YGL+AG+FT+++D
Sbjct: 373 YFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDK 432
Query: 361 ANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 414
A T+ AL+ G+VW+NC+ V A PFGG+K SG GRE G Y Y +VK V
Sbjct: 433 AITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVT 486
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} Length = 503 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Score = 409 bits (1051), Expect = e-140
Identities = 160/425 (37%), Positives = 241/425 (56%), Gaps = 9/425 (2%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
M ERS+++L A ++ D IA LE +N A+ ++ + YYAG A
Sbjct: 77 MAGIERSRVMLEAARIIRERRDNIAKLEVINN-GKTITEAEYDIDAAWQCIEYYAGLAPT 135
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 120
+ G G T EP+GV I+ WN+P ++ AWK PALACGN +V K + TP
Sbjct: 136 LSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTP 195
Query: 121 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 180
++ + ++++ HEAG+P G++N+V G G G+ L H V K++FTGS TGK V++++A
Sbjct: 196 VTGVILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSA 254
Query: 181 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240
K +K VTLELGGKSP ++ +D +++ A A A F QGQ C G+R FV + QF
Sbjct: 255 K-TVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQF 313
Query: 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--- 297
+E+ VVGDP + G I Q +K+L ++ GA++ GGE L
Sbjct: 314 LEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSD 373
Query: 298 ---AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVF 354
GY++ P V +DDM K+EIFGPV S+L + +EV+QR+N + +GLA+GVF
Sbjct: 374 PKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVF 433
Query: 355 THNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 414
T ++ A+ + L G+ +IN + + +PFGGYK SG GRE G ++ Y Q+K V+
Sbjct: 434 TRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYSQLKTVI 493
Query: 415 TALKN 419
+ +
Sbjct: 494 VEMGD 498
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Score = 355 bits (912), Expect = e-120
Identities = 148/416 (35%), Positives = 227/416 (54%), Gaps = 4/416 (0%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
T R++ +L+ AD++E + A LE+ + GKP + E+P +FR++AG A
Sbjct: 58 TTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARC 117
Query: 61 IQGLTAPADGPYH-VQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 119
+ GL A H +P+GV I PWN+PL+M AWK+ PALA GN +VLK +E T
Sbjct: 118 LNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEIT 177
Query: 120 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 179
PL+AL +++L + P GV+NI+ G G T G L H +V ++ TGS TG+ ++
Sbjct: 178 PLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIIS-H 235
Query: 180 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239
S++K +ELGGK+P IV +DAD++ E ++N GQ C A R + + +YD
Sbjct: 236 TASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDT 295
Query: 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGV-DGGAKLETGGERLGA 298
VEK A G P + GP E++ K + G K+ TGGE+
Sbjct: 296 LVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKG 355
Query: 299 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNL 358
GYY PT+ G D I + E+FGPV S+ + + ++V+ +N SQYGLA+ V+T ++
Sbjct: 356 NGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDV 415
Query: 359 DTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 414
A+ + L+ G W+N + + +P GG K SG G++ Y L +Y V+ V+
Sbjct: 416 GRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVM 471
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Score = 304 bits (780), Expect = e-100
Identities = 133/424 (31%), Positives = 203/424 (47%), Gaps = 13/424 (3%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRL-----FRYYA 55
++ ER+ + + AD+L R ++I A+ + + K ++ + V +
Sbjct: 58 LSYIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRM 117
Query: 56 GWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKT 115
G A EP+G+ I P+N+P+ + K+ PAL GN I K
Sbjct: 118 EGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKP 177
Query: 116 AEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 175
Q +S L +++ EAGLP GV N ++G G G + H V+ + FTGST G+ +
Sbjct: 178 PTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERI 237
Query: 176 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES 235
++A ++P+ LELGGK IV EDAD++ A+ F GQ C A R V ES
Sbjct: 238 GKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMES 294
Query: 236 VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER 295
V D+ VEK + + + P ID++ + + I D GA T +R
Sbjct: 295 VADELVEK-IREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKR 353
Query: 296 LGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFT 355
+G I P +F V DM +A +E FGPV I++ ++E I+ SN S+YGL A +FT
Sbjct: 354 ---EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFT 410
Query: 356 HNLDTANTLMRALRVGSVWINC-FDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 414
++ A + L VG+V IN PF G K+SG G + YS+ VK+VV
Sbjct: 411 NDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVV 470
Query: 415 TALK 418
+K
Sbjct: 471 FDIK 474
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 516 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Score = 300 bits (768), Expect = 7e-98
Identities = 138/423 (32%), Positives = 214/423 (50%), Gaps = 13/423 (3%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
+RS+++L+ A L+ R E+ A ++ GK + ++ +V YYA A +
Sbjct: 93 WPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEA-SADVAEAIDFIEYYARAALR 151
Query: 61 IQGLTAPADGPY--HVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 118
+ ++ + P+G I PWNFP+ +F + +A GNT++ K AE
Sbjct: 152 YRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAED 211
Query: 119 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 178
+ V ++ HEAG PPGV+N + G G GA L H + + FTGS G + +
Sbjct: 212 AVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEA 271
Query: 179 AAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVH 233
A + + K +E GGK+ IV E AD D AAE + + QGQ C A SR +
Sbjct: 272 AGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILT 331
Query: 234 ESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGG 293
+ Y+ +E+ A + VG P + GP + +EQ K+L YI G + G + GG
Sbjct: 332 QGAYEPVLERVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLV-LGG 389
Query: 294 ERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGV 353
+RL +GY+I PTVFT V IA++EIFGPV S+++ KD E ++ +N + YGL GV
Sbjct: 390 KRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGV 449
Query: 354 FTHNLDTANTLMRALRVGSVWIN--CFDVFDAAIPFGGYKQSGQGREKGSYS-LSNYLQV 410
++ + R VG+++ N PFGG+K SG + G+ L +L++
Sbjct: 450 YSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEM 509
Query: 411 KAV 413
KAV
Sbjct: 510 KAV 512
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 446 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 290 bits (742), Expect = 6e-95
Identities = 109/420 (25%), Positives = 165/420 (39%), Gaps = 17/420 (4%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYA----G 56
+ R + + ++ + I+ D GK S EV
Sbjct: 19 RSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHVLEELDTTIKELPD 78
Query: 57 WADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 116
WA+ + EP+GV I WN+P + + A+A GN ++LK +
Sbjct: 79 WAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPS 138
Query: 117 EQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 176
E + A ++ L+ + + G D + +TGST GKIV+
Sbjct: 139 EVSGHMADLLATLIPQ---YMDQNLYLVVKGGVPETTELLKERFDHIMYTGSTAVGKIVM 195
Query: 177 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 236
AAK +L PVTLELGGKSP V +D D+D A + F N GQ C A S+
Sbjct: 196 AAAAK-HLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSI 254
Query: 237 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 296
+Q VEK G+ K G I+ F+++ I + G
Sbjct: 255 QNQIVEKLKKSLK-DFYGEDAKQSRDYGRIINDRHFQRVKGLIDNQK------VAHGGTW 307
Query: 297 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH 356
YI PT+ V + ++EIFGPV I+ + L+E IQ N + LA VF++
Sbjct: 308 DQSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSN 367
Query: 357 NLDTANTLMRALRVGSVWIN--CFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 414
N ++ G V N + +PFGG SG G G S + ++ +
Sbjct: 368 NEKVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGNSGMGAYHGKKSFETFSHRRSCL 427
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} Length = 499 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Score = 259 bits (662), Expect = 3e-82
Identities = 131/421 (31%), Positives = 194/421 (46%), Gaps = 12/421 (2%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
M ER ++ + AD++ER+ D A + + GKP A EV R K
Sbjct: 72 MPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSA-AVGEVKAAVDRLRLAELDLKK 130
Query: 61 IQGLTAPADGPYHVQ-----TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKT 115
I G P D Y EP+GV I P+N+PL K+ + GN +V+K
Sbjct: 131 IGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKP 190
Query: 116 AEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 175
+ PL A K L +AG PP + +++ G A + + V ++FTGST G+ V
Sbjct: 191 SISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEK-IVADDRVAAVSFTGSTEVGERV 249
Query: 176 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES 235
+++ +K +ELGG P IV EDAD+D AA+ ++ GQ C A
Sbjct: 250 VKVGG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERP 306
Query: 236 VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER 295
VY + VE+ VGDP + GP I ++++ I V+ G ++ GG R
Sbjct: 307 VYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR 366
Query: 296 LGAKGYYIKP-TVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVF 354
LG DM++ K E+F PV S ++ KDLD+ I+ +N YGL A VF
Sbjct: 367 LGPTYVQPTLVEAPADRVKDMVLYKREVFAPVASAVEVKDLDQAIELANGRPYGLDAAVF 426
Query: 355 THNLDTANTLMRALRVGSVWINCFDVFDAA-IPFGGYKQSGQGREKGSYSLSNYLQVKAV 413
++ +R L VG+++IN PFGG K+SG RE Y++ K +
Sbjct: 427 GRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTI 486
Query: 414 V 414
V
Sbjct: 487 V 487
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} Length = 414 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Score = 171 bits (432), Expect = 2e-49
Identities = 66/430 (15%), Positives = 118/430 (27%), Gaps = 59/430 (13%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQS-----------AQTEVPMTTR 49
T E++K I + A+ L+ EI D K E+ + +
Sbjct: 20 ATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMIK 79
Query: 50 LFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGN 109
G D + + ++ + + I + + AL GN
Sbjct: 80 ACETVIGLKDPVGEVIDSWVREDGLRIARVRVPIGPIGIIYESRPNVTVETTILALKSGN 139
Query: 110 TIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSG-YGPTAGAALASHMEVDKLAFTGS 168
TI+L+ S + + EA + T + + + + +
Sbjct: 140 TILLRGGSDALNSNKAIVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVI 199
Query: 169 TTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGS 228
G ++ + PV G V E AD+ KA + A C A
Sbjct: 200 PRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADLKKAVPVIINAKTQR-PGTCNAAE 258
Query: 229 RTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAK 288
+ VHE + +F+ K V ++ E
Sbjct: 259 KLLVHEKIAKEFLPVIVEELRKHGVEVRGCEKTREIVPDVVPATEDDWPT---------- 308
Query: 289 LETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYG 348
E + +I K++DE I+ G
Sbjct: 309 --------------------------------EYLDLIIAIKVVKNVDEAIEHIKKYSTG 336
Query: 349 LAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREK----GSYSL 404
+ + T N A + + +V++N F FG + G ++ G L
Sbjct: 337 HSESILTENYSNAKKFVSEIDAAAVYVNASTRFTDGGQFGFGAEIGISTQRFHARGPVGL 396
Query: 405 SNYLQVKAVV 414
K VV
Sbjct: 397 RELTTYKFVV 406
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} Length = 504 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Score = 157 bits (396), Expect = 2e-43
Identities = 73/442 (16%), Positives = 138/442 (31%), Gaps = 40/442 (9%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
+ +R+ ++ A LE +D+I A + P + E+ T R +A +
Sbjct: 45 LNNSKRASLLRTIASELEARSDDIIARAHLETALPEVR-LTGEIARTANQLRLFADVVNS 103
Query: 61 IQGLTAPAD---------GPYHVQTLHEPIGVAGQIIPWNFPL--LMFAWKVGPALACGN 109
A D ++ +G NFPL ALA G
Sbjct: 104 GSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGC 163
Query: 110 TIVLKTAEQTPLS----ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 165
+++K P + A + + L + LP + ++ G G AL SH E+ + F
Sbjct: 164 PVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGF 223
Query: 166 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAEL---AHYALFFNQGQ 222
TGS G+ + LA + G + + A+L ++ GQ
Sbjct: 224 TGSVGGGRALFNLAHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQ 283
Query: 223 CCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSG 282
C F + Q + +++ + I
Sbjct: 284 FCTKPGVVFALNTPETQAFIETAQSLIRQQSPSTLLTPGIRDSYQSQVVSRGSDDGIDVT 343
Query: 283 VDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRS 342
+ + ++EIFGP I+ +++ +++ S
Sbjct: 344 FS---------QAESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLS 394
Query: 343 NASQYGLAAGVFTHNLDT--ANTLMRALR--VGSVWINCF----DVFDAAI---PFGGYK 391
L A + D + L+ L G + N + +V A + P+
Sbjct: 395 EMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPAST 454
Query: 392 QSGQGREKGSYSLSNYLQVKAV 413
S G+ ++ +L+ A
Sbjct: 455 HSA-STSVGAEAIHRWLRPVAY 475
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 436 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 96.8 bits (240), Expect = 2e-22
Identities = 57/412 (13%), Positives = 113/412 (27%), Gaps = 61/412 (14%)
Query: 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 60
++ RS I+ + D L+ + I N + +T + + L R DK
Sbjct: 22 ISNEGRSDILYKIHDALKANAHAIEE----ANKIDLAVAKETGLA-DSLLKRLDLFKGDK 76
Query: 61 IQGLTAPADGPYHVQTLHEPIGVAGQ--------------------IIPWNFPLLMFAWK 100
+ + G V L +P+G ++ + + A
Sbjct: 77 FEVM---LQGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESRPEVIANI 133
Query: 101 VGPALACGNTIVLKTAEQTPLSALYVSKLL---HEAGLPPGVLNIVSGYGPTAGAALASH 157
++ GN +LK +++ + ++K++ + + S ++
Sbjct: 134 TALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETGVPVGSVQLIETRQDVSDL 193
Query: 158 MEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF 217
++ D+ +++ + PV G + EDAD+ KA ++ A
Sbjct: 194 LDQDEYIDLVVPRGSNALVRKIKDTTKIPVLGHADGICSIYLDEDADLIKAKRISLDAKT 253
Query: 218 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILK 277
C ++ + N V
Sbjct: 254 NYPAGCNA-METLLINPKFSKWWEVLENLTLEGGVT------------------------ 288
Query: 278 YIRSGVDGGAKLETGGERLGA-KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 336
I + D LG TV + D E + +
Sbjct: 289 -IHATKDLKTAYFDKLNELGKLTEAIQCKTVDADEEQDF---DKEFLSLDLAAKFVTSTE 344
Query: 337 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFG 388
IQ N + T N A M+ + V+ N F +G
Sbjct: 345 SAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVYWNASTRFADGFRYG 396
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 423 | |||
| d1bxsa_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Sheep (O | 100.0 | |
| d1o04a_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Human (H | 100.0 | |
| d1a4sa_ | 503 | Aldehyde reductase (dehydrogenase), ALDH {Baltic c | 100.0 | |
| d1wnda_ | 474 | Putative betaine aldehyde dehydrogenase YdcW {Esch | 100.0 | |
| d1uzba_ | 516 | 1-pyrroline-5-carboxylate dehydrogenase {Thermus t | 100.0 | |
| d1ky8a_ | 499 | Non-phosphorylating glyceraldehyde-3-phosphate deh | 100.0 | |
| d1ad3a_ | 446 | Aldehyde reductase (dehydrogenase), ALDH {Rat (Rat | 100.0 | |
| d1euha_ | 474 | Aldehyde reductase (dehydrogenase), ALDH {Streptoc | 100.0 | |
| d1ez0a_ | 504 | Aldehyde reductase (dehydrogenase), ALDH {Vibrio h | 100.0 | |
| d1o20a_ | 414 | Gamma-glutamyl phosphate reductase {Thermotoga mar | 100.0 | |
| d1vlua_ | 436 | Gamma-glutamyl phosphate reductase {Baker's yeast | 100.0 | |
| d1k75a_ | 431 | L-histidinol dehydrogenase HisD {Escherichia coli | 96.81 |
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Probab=100.00 E-value=7.3e-94 Score=732.19 Aligned_cols=419 Identities=57% Similarity=0.988 Sum_probs=403.8
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
+|.++|.++|+++++.|++++++|++++++|+|||..++...|+..+++.+++++.+.++..+...+...+...++.++|
T Consensus 73 ~s~~eR~~iL~kia~~L~~~~eela~l~~~E~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P 152 (494)
T d1bxsa_ 73 MDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEP 152 (494)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECCSSSEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHhCHHHHHHHHHHhcCCchhhhhhhhhhhhhHHHHHHhhhhhhhcceeecCCCCceeEEEEcc
Confidence 58899999999999999999999999999999999998766689999999999999988887776666667788999999
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 160 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v 160 (423)
+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+|+|++.+.++.|++||+|
T Consensus 153 ~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKpse~tp~~a~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~p~v 232 (494)
T d1bxsa_ 153 VGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDV 232 (494)
T ss_dssp CCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTC
T ss_pred EEEEEEEeCccchhHHHHHHHHHHHHcCCeEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999888899999999999
Q ss_pred ceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHHH
Q 014515 161 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240 (423)
Q Consensus 161 ~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~f 240 (423)
++|.||||+.+|+.|++.+++.++||+++|+||+||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|
T Consensus 233 ~~i~fTGS~~~g~~i~~~aa~~~~~~~~lElGG~np~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~~~d~f 312 (494)
T d1bxsa_ 233 DKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEF 312 (494)
T ss_dssp SEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHH
T ss_pred CEEEecCCHHHHHHHHHHhcccCCCeEEEEcCCcCcEEECcCcchhHhHHHHHHHHhcCCCcccccceEEecccchhHHH
Confidence 99999999999999999888757899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCccccccc
Q 014515 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKD 320 (423)
Q Consensus 241 ~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~ 320 (423)
+++|+++++++++|+|.++++++||+++.++++++.+++++++++|+++++||...+..|+|++|||+.++++++.+++|
T Consensus 313 ~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~ 392 (494)
T d1bxsa_ 313 VRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKE 392 (494)
T ss_dssp HHHHHHHHTCCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHS
T ss_pred HHHHHhhhhheeeeccCCCCCcCCCcCCHHHHHHHHHHHHHHHHcCCEEEeCCCccCCCceeEcCEEEeCCCCCcHHHhc
Confidence 99999999999999999999999999999999999999999999999999999877778999999999999999999999
Q ss_pred ccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCCCcch
Q 014515 321 EIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKG 400 (423)
Q Consensus 321 E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g 400 (423)
|+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||+++...+.+||||+|.||+|+++|
T Consensus 393 E~FGPvl~v~~~~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~~~SG~G~~~g 472 (494)
T d1bxsa_ 393 EIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELG 472 (494)
T ss_dssp CCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCCCTTSCBCCSGGGEESCBSH
T ss_pred cccCceEEEEEECCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCEeEEEEcCCCCcCCCCCcCccccccCChhhH
Confidence 99999999999999999999999999999999999999999999999999999999988888899999999999999999
Q ss_pred HHHHHhhheeeEEEEecCC
Q 014515 401 SYSLSNYLQVKAVVTALKN 419 (423)
Q Consensus 401 ~~~l~~~~~~k~v~~~~~~ 419 (423)
.+|+++||+.|+|++++.+
T Consensus 473 ~~~~~~ft~~k~i~~~~~~ 491 (494)
T d1bxsa_ 473 EYGFHEYTEVKTVTIKISQ 491 (494)
T ss_dssp HHHHHTTEEEEEEEEECSC
T ss_pred HHHHHHhcceEEEEEecCC
Confidence 9999999999999999854
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Probab=100.00 E-value=4.3e-93 Score=726.07 Aligned_cols=419 Identities=60% Similarity=1.012 Sum_probs=403.1
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
+|.++|+++|+++++.|++++++|++++++|+|||..++...|+..++..+++++.+.....++..+...+...++.++|
T Consensus 73 ~~~~eRa~iL~~~a~~l~~~~eela~~~~~E~GK~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P 152 (494)
T d1o04a_ 73 MDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEP 152 (494)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECCSSSEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcchhhhhhhHHHHHHHHHHHHHHHHHHhcCceeccCCCceeEEEEec
Confidence 57899999999999999999999999999999999999876799999999999999988887776666666778899999
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 160 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v 160 (423)
+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|++.+.++.|+.||++
T Consensus 153 ~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~l~~~aglP~gv~~~v~g~~~~~g~~L~~~~~v 232 (494)
T d1o04a_ 153 VGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDV 232 (494)
T ss_dssp CCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTC
T ss_pred ccEEEEECCcccHHHHHHHHHHHHHHcCCeEEEeCCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHhhCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999888899999999999
Q ss_pred ceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHHH
Q 014515 161 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240 (423)
Q Consensus 161 ~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~f 240 (423)
+.|.||||+++|+.|++.++..+++|+++|+||+||+||++|||++.|++.+++++|.++||.|++++++|||++++|+|
T Consensus 233 ~~v~fTGS~~~g~~i~~~aa~~~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f 312 (494)
T d1o04a_ 233 DKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEF 312 (494)
T ss_dssp CEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHH
T ss_pred CEEEEeCCHHHHHHHHHHhhccCCCeEEEECCCcCcEEEccCccHHHHHHhhhhhccccCcccccccccccccchhhHHH
Confidence 99999999999999998887557899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCccccccc
Q 014515 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKD 320 (423)
Q Consensus 241 ~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~ 320 (423)
++++.+++..+++|+|.++++++||+++..+++++++++++++++|+++++||....+.|+|++|||+.++++++++++|
T Consensus 313 ~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~e 392 (494)
T d1o04a_ 313 VERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKE 392 (494)
T ss_dssp HHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHS
T ss_pred HHHHHHHhhheeecCcccccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCceEcCEEEeCCCCCCHHHhc
Confidence 99999999999999999999999999999999999999999999999999999887778999999999999999999999
Q ss_pred ccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCCCcch
Q 014515 321 EIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKG 400 (423)
Q Consensus 321 E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g 400 (423)
|+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++...+.+||||+|.||+|+++|
T Consensus 393 E~FGPvl~v~~~~~~~eai~~an~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~~~SG~G~~~g 472 (494)
T d1o04a_ 393 EIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELG 472 (494)
T ss_dssp CCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCSGGGEESCBST
T ss_pred cccCceEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCcCCcccccCCchhH
Confidence 99999999999999999999999999999999999999999999999999999999988888899999999999999999
Q ss_pred HHHHHhhheeeEEEEecCC
Q 014515 401 SYSLSNYLQVKAVVTALKN 419 (423)
Q Consensus 401 ~~~l~~~~~~k~v~~~~~~ 419 (423)
.+++++||+.|+|+++++.
T Consensus 473 ~~~~~~ft~~k~v~~~~p~ 491 (494)
T d1o04a_ 473 EYGLQAYTEVKTVTVKVPQ 491 (494)
T ss_dssp GGGGGGGEEEEEEEEECSC
T ss_pred HHHHHHhcCeEEEEEeCCC
Confidence 9999999999999998754
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Probab=100.00 E-value=9.1e-91 Score=709.48 Aligned_cols=420 Identities=38% Similarity=0.726 Sum_probs=400.8
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCCCCCCCceeEeecc
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEP 80 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 80 (423)
+|..+|+++|+++++.|++++++|++++++|+|||+.++.. |+..+++.+++++.+.+...+.....+.+...+..++|
T Consensus 77 ~s~~eR~~iL~~~a~~L~~~~eela~~~~~etGkp~~ea~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P 155 (503)
T d1a4sa_ 77 MAGIERSRVMLEAARIIRERRDNIAKLEVINNGKTITEAEY-DIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREP 155 (503)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCEEEEECGGGCEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhhhcchhhhh-hhhhhhhcccccccccccccccccccCCCccccccccc
Confidence 58899999999999999999999999999999999999886 99999999999999887776655555556778999999
Q ss_pred ceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccCc
Q 014515 81 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 160 (423)
Q Consensus 81 ~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~v 160 (423)
+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++| +.+.++.|+.||+|
T Consensus 156 ~GVv~~I~p~NfP~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g-~~e~g~~L~~~~~v 234 (503)
T d1a4sa_ 156 LGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNV 234 (503)
T ss_dssp CSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTC
T ss_pred ceeeecccCCCChHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCCCeEEEecC-CHHHHHHHHhCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999 67899999999999
Q ss_pred ceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHHH
Q 014515 161 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 240 (423)
Q Consensus 161 ~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~f 240 (423)
|+|.||||+++|+.|++.+++ ++||+++|+|||||+||++|||++.|++.+++++|.++||.|++++++|||++++++|
T Consensus 235 ~~V~fTGS~~~G~~i~~~aa~-~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~ri~v~~~~~~~~ 313 (503)
T d1a4sa_ 235 AKVSFTGSVPTGKKVMEMSAK-TVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQF 313 (503)
T ss_dssp CEEEEESCHHHHHHHHHHHHT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHH
T ss_pred CEEEEeCCHHHHHHHHHHhhh-cCCcEEEECCCcCcEEECCCccHHHHhhhhhcchhccCCCccccCcceEEEechhhhH
Confidence 999999999999999999887 8899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccC------CCCceeecEEEecCCCc
Q 014515 241 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG------AKGYYIKPTVFTGVKDD 314 (423)
Q Consensus 241 ~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~------~~g~~~~Ptvl~~~~~~ 314 (423)
++++.+.++++++|+|.++.+++||++++.+++++++++++++++|+++++||.... ..|+|++|||+.+++++
T Consensus 314 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~~~~a~~~Ga~v~~gg~~~~~~~~~~~~G~~~~Ptvl~~~~~~ 393 (503)
T d1a4sa_ 314 LEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDD 393 (503)
T ss_dssp HHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTT
T ss_pred HHHHHHhhhhEeeccccccccccccccCHHHHHHHHHHHHHHHHcCCEEEECCcccCCCCcccCCceEEcCEEEeCCCCC
Confidence 999999999999999999999999999999999999999999999999999997532 46899999999999999
Q ss_pred ccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCC
Q 014515 315 MLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSG 394 (423)
Q Consensus 315 ~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG 394 (423)
++++++|+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||+++...+.+||||+|.||
T Consensus 394 ~~~~~~E~FgPvl~v~~~~~~~eai~~an~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG 473 (503)
T d1a4sa_ 394 MTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSG 473 (503)
T ss_dssp SHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCCCTTSCBCCSGGGE
T ss_pred CHHHhccccCceEEEEEcCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCccCcccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999988888899999999999
Q ss_pred CCCcchHHHHHhhheeeEEEEecCC-CCCC
Q 014515 395 QGREKGSYSLSNYLQVKAVVTALKN-PAWL 423 (423)
Q Consensus 395 ~g~~~g~~~l~~~~~~k~v~~~~~~-~~~~ 423 (423)
+|+++|.+|+++||+.|+|++++.+ +.||
T Consensus 474 ~G~~~g~~~l~~~t~~k~v~~~~~~~~~~f 503 (503)
T d1a4sa_ 474 FGRENGQATVDYYSQLKTVIVEMGDVDSLF 503 (503)
T ss_dssp ECCBSTTGGGGGSEEEEEEEECCSCCCCCC
T ss_pred CCcchHHHHHHHhhCeEEEEEcCCCCCCCC
Confidence 9999999999999999999999854 6666
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=3.9e-89 Score=694.09 Aligned_cols=415 Identities=35% Similarity=0.630 Sum_probs=387.6
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCC-CCCCCceeEeec
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP-ADGPYHVQTLHE 79 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 79 (423)
+|.++|.++|+++++.|++++++|++++++|+|||+.++...++..+...+++++...........+ ...+...+++++
T Consensus 58 ~~~~~R~~iL~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (474)
T d1wnda_ 58 TTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRD 137 (474)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCChhHhhhcccccccccccccccccccccccccccccCCcceEEEEe
Confidence 5889999999999999999999999999999999999987667777777777776655443332222 224567889999
Q ss_pred cceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhcccC
Q 014515 80 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 159 (423)
Q Consensus 80 P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~~ 159 (423)
|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..++++++++ +|+|++|+++++++++++.|++||+
T Consensus 138 P~GVV~~I~p~N~P~~~~~~~~a~ALaaGN~Vv~Kps~~~p~~~~~~~~l~~~~-lP~gv~~~v~g~~~~~g~~L~~~p~ 216 (474)
T d1wnda_ 138 PLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPK 216 (474)
T ss_dssp ECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTT
T ss_pred cccceEEEeecchHhhhhhccHHHHHHhCCCEEEeCCCcCcHHHHHHHHHHHHh-CCCCcEEEEeCCcHHHHHHHHhCCC
Confidence 999999999999999999999999999999999999999999999999999775 9999999999988889999999999
Q ss_pred cceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCccHHH
Q 014515 160 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 239 (423)
Q Consensus 160 v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~~ 239 (423)
|++|.||||+++|+.|.+.++. ++||+++|+|||||+||++|||++.|++.+++++|.++||.|++++++|||++++|+
T Consensus 217 i~~v~fTGS~~~G~~i~~~a~~-~~k~~~lElgG~~p~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~ 295 (474)
T d1wnda_ 217 VRMVSLTGSIATGEHIISHTAS-SIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDT 295 (474)
T ss_dssp EEEEEEESCHHHHHHHHHHHGG-GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHH
T ss_pred cCEEEeeCCHHHHHHHHHhhhc-CCCeEEEEcCCCCceEEcCchhhhhhhhhhhhhcccCCCcccccccccccccccchh
Confidence 9999999999999999999887 799999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCE-EEeCCcccCCCCceeecEEEecCCCccccc
Q 014515 240 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAK-LETGGERLGAKGYYIKPTVFTGVKDDMLIA 318 (423)
Q Consensus 240 f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~-~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~ 318 (423)
|+++|+++++++++|+|.++++++||+++..+.+++.+++++++.+|+. ++.|+......|+|++|||+.++++++.++
T Consensus 296 ~~~~l~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~ga~~v~~G~~~~~~~g~~~~Ptil~~~~~~~~~~ 375 (474)
T d1wnda_ 296 LVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIV 375 (474)
T ss_dssp HHHHHHHHHHTCCBCCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCSSSSCCBCCEEEECCCTTSHHH
T ss_pred hhhhhHHHHHhhccCCcCCCCceecccccccccchHHHHHHHHHHCCCeEEEeCCcccCCCceEEeeeEeecccccccce
Confidence 9999999999999999999999999999999999999999999999985 556666666789999999999999999999
Q ss_pred ccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCCCCCCCCCCCCc
Q 014515 319 KDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGRE 398 (423)
Q Consensus 319 ~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~ 398 (423)
+||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++....+.+||||+|.||+|++
T Consensus 376 ~eE~FGPVl~v~~~~~~deai~~an~~~~GL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfGG~k~SG~G~~ 455 (474)
T d1wnda_ 376 QKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKD 455 (474)
T ss_dssp HSCCCSSEEEEEEECCHHHHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCCCTTSCBCCSGGGEECCB
T ss_pred eecccCCeEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCccEEEEeCCCCccCCCCcccccccccCcc
Confidence 99999999999999999999999999999999999999999999999999999999999888888999999999999999
Q ss_pred chHHHHHhhheeeEEEEec
Q 014515 399 KGSYSLSNYLQVKAVVTAL 417 (423)
Q Consensus 399 ~g~~~l~~~~~~k~v~~~~ 417 (423)
+|.+|+++||+.|+|++++
T Consensus 456 ~g~~gl~~~t~~k~v~i~~ 474 (474)
T d1wnda_ 456 MSLYGLEDYTVVRHVMVKH 474 (474)
T ss_dssp SHHHHHHTTEEEEEEEEEC
T ss_pred CHHHHHHHcCCEEEEEEeC
Confidence 9999999999999999874
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=3.2e-87 Score=686.05 Aligned_cols=414 Identities=33% Similarity=0.548 Sum_probs=385.5
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCC--CCCCCceeEee
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP--ADGPYHVQTLH 78 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 78 (423)
+|.++|.++|+++++.|++++++|++++++|+|||..++.. |+..+++.+++++............ ...+...+..+
T Consensus 93 ~s~~~R~~iL~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (516)
T d1uzba_ 93 WPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEASA-DVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFY 171 (516)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccch-hHHHHHHHHHHHHHHHHhhhhcccccccccccceeEEe
Confidence 58899999999999999999999999999999999999875 9999999999999888776554322 22356677889
Q ss_pred ccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhccc
Q 014515 79 EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHM 158 (423)
Q Consensus 79 ~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~~~ 158 (423)
+|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|.+.+.++.|++||
T Consensus 172 ~P~Gvv~~I~PwN~Pl~~~~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~hp 251 (516)
T d1uzba_ 172 VPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHP 251 (516)
T ss_dssp EECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCT
T ss_pred eccCccccccccccccccccccccchhhhcccccccccchhHHHHHHHHHHHHHhCcCcCeEEEccCChHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999998888999999999
Q ss_pred CcceEeeecCchHHHHHHHHHhh-----CCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEe
Q 014515 159 EVDKLAFTGSTTTGKIVLQLAAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVH 233 (423)
Q Consensus 159 ~v~~v~~tGs~~~~~~v~~~~a~-----~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~ 233 (423)
+|++|.||||+.+|+.|++.++. .++||+++|+||+||+||++|||++.|++.+++++|.++||.|++++++|||
T Consensus 252 ~v~~I~FTGs~~~G~~i~~~aa~~~~~~~~~k~v~lElgG~~p~iV~~dAd~~~aa~~i~~~~~~~~GQ~C~a~~ri~v~ 331 (516)
T d1uzba_ 252 RIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILT 331 (516)
T ss_dssp TCCEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEE
T ss_pred CcCEEecccchhHHHHHHHHHhhcccchhhhhhheeeccCccceeeecchhHHHHHHHHhhhhcccCCCcccccCccccc
Confidence 99999999999999999998772 3679999999999999999999999999999999999999999999999999
Q ss_pred CccHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCC
Q 014515 234 ESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKD 313 (423)
Q Consensus 234 ~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~ 313 (423)
++++|+|++++.++++++++| |.++++++||+++..+++++++++++++++|+.+ +||...+..|+|++|||+.++++
T Consensus 332 ~~i~d~~~~~~~~~~~~l~~g-~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v-~~g~~~~~~g~~~~Ptvl~~v~~ 409 (516)
T d1uzba_ 332 QGAYEPVLERVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLV-LGGKRLEGEGYFIAPTVFTEVPP 409 (516)
T ss_dssp HHHHHHHHHHHHHHHTTCCBS-CGGGCCSBCCCSCHHHHHHHHHHHHHHTTTSEEE-ECCSBCSSSSCCBCCEEEESCCT
T ss_pred cccccchhhHHHHHHHhcccC-CCcccCccccccCHHHHHHHHHHHHHHHHCCCEE-ECCCcCCCCCceECCEEEecCCC
Confidence 999999999999999999999 5688999999999999999999999999888655 56666666899999999999999
Q ss_pred cccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC--CCCCCCCCCCC
Q 014515 314 DMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYK 391 (423)
Q Consensus 314 ~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~pfgG~~ 391 (423)
++++++||+||||++|++|+|.|||++++|+++|||++||||+|.++++++++++++|+|+||+... ..+.+||||+|
T Consensus 410 ~~~~~~eE~FGPvl~v~~~~d~eeai~~an~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k 489 (516)
T d1uzba_ 410 KARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFK 489 (516)
T ss_dssp TSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSG
T ss_pred CchhhcCCCcCceEEEEEeCCHHHHHHHHHCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEEEcCCCCCCCcCCCCCcCcc
Confidence 9999999999999999999999999999999999999999999999999999999999999998654 34689999999
Q ss_pred CCCCCCcch-HHHHHhhheeeEEEEec
Q 014515 392 QSGQGREKG-SYSLSNYLQVKAVVTAL 417 (423)
Q Consensus 392 ~SG~g~~~g-~~~l~~~~~~k~v~~~~ 417 (423)
.||+|+++| .+++++||+.|+|+.++
T Consensus 490 ~SG~G~~~G~~~~l~~~~~~k~v~~r~ 516 (516)
T d1uzba_ 490 LSGTNAKTGALDYLRLFLEMKAVAERF 516 (516)
T ss_dssp GGBSCCCBTSHHHHHTTEEEEEEEEEC
T ss_pred cccCCcccchHHHHHHhCCeeeEEEcC
Confidence 999999865 79999999999998764
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Probab=100.00 E-value=4e-82 Score=646.40 Aligned_cols=415 Identities=32% Similarity=0.497 Sum_probs=380.2
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccCC-----CCCCCcee
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP-----ADGPYHVQ 75 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~-----~~~~~~~~ 75 (423)
+|.++|+++|+++++.|+++.++|++++++|+|||..++.. |+..+++.+++++..+++..+.... ...+...+
T Consensus 72 ~~~~~R~~iL~~~a~~l~~~~~~la~~~~~etGk~~~~a~~-Ev~~~i~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (499)
T d1ky8a_ 72 MPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAVG-EVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGL 150 (499)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHGGGGGGTTTCCEEEESTTSSTTTTEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhh-hhhcccccccchhhhhhhhhhceeccccccccccccce
Confidence 57899999999999999999999999999999999999875 9999999999999888766544321 12345678
Q ss_pred EeeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhh
Q 014515 76 TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 155 (423)
Q Consensus 76 ~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~ 155 (423)
..++|+|||++|+|||+|+...++++++||++||+||+|||+.+|.++..+.+++.++|+|.++++++.+++ +.+..|.
T Consensus 151 ~~r~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGn~Vi~Kps~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~-~~~~~l~ 229 (499)
T d1ky8a_ 151 VRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIV 229 (499)
T ss_dssp EEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCCCG-GGGHHHH
T ss_pred eeeeccccccccccccccchhhhhcchhhhcccccccccccccchhhhhhhccccccccccceeeecccCCh-HHHHHHh
Confidence 899999999999999999999999999999999999999999999999999999999999999999998854 5678899
Q ss_pred cccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCc
Q 014515 156 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES 235 (423)
Q Consensus 156 ~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~ 235 (423)
.|++++.+.||||...++.+.+.++ .+|+++|+||+||+||++|||++.|++.+++++|.++||.|++++++|||++
T Consensus 230 ~~~~i~~v~ftGs~~~g~~i~~~~~---~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~ 306 (499)
T d1ky8a_ 230 ADDRVAAVSFTGSTEVGERVVKVGG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERP 306 (499)
T ss_dssp HCTTCCEEEEESCHHHHHHHHHHHC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHH
T ss_pred hccceeEEEeecccccceEEeeccc---ccceEEecCCCCeEEEcCCcChhhhhhhhhhhhhccCcccccccccccccch
Confidence 9999999999999999999998764 4799999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEe---cCC
Q 014515 236 VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFT---GVK 312 (423)
Q Consensus 236 ~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~---~~~ 312 (423)
++|+|+++|+++++++++|+|.|+++++||+++.++++++++++++++.+|++++.||.... ..+..++++. ...
T Consensus 307 v~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~~~~~~~--~~~~~~~~~~~~~~~~ 384 (499)
T d1ky8a_ 307 VYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLG--PTYVQPTLVEAPADRV 384 (499)
T ss_dssp HHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCEEE--TTEECCEEEECCHHHH
T ss_pred hHHHHHHHHHHHHHhCccCCCCCccccccccchHHHHHHHHHHHHHHHHcCCEEeeeecccc--ccccccccccccccCC
Confidence 99999999999999999999999999999999999999999999999999999999997643 2333344433 345
Q ss_pred CcccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC-CCCCCCCCCC
Q 014515 313 DDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYK 391 (423)
Q Consensus 313 ~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~pfgG~~ 391 (423)
+|+.+++||+||||++|++|+|.+||++++|+++|||++||||+|.++++++++++++|+|+||+.+.. .+.+||||+|
T Consensus 385 ~d~~~~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gLt~sv~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k 464 (499)
T d1ky8a_ 385 KDMVLYKREVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRK 464 (499)
T ss_dssp TTSHHHHSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCCEE
T ss_pred CCChhhhccccCceEEEEEcCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCccccc
Confidence 789999999999999999999999999999999999999999999999999999999999999997654 3779999999
Q ss_pred CCCCCCcchHHHHHhhheeeEEEEecCC-CCC
Q 014515 392 QSGQGREKGSYSLSNYLQVKAVVTALKN-PAW 422 (423)
Q Consensus 392 ~SG~g~~~g~~~l~~~~~~k~v~~~~~~-~~~ 422 (423)
.||+|+++|.+|+++||+.|+|++++++ +.|
T Consensus 465 ~SG~G~~~g~~~~~~~~~~k~i~~~~~~~~~~ 496 (499)
T d1ky8a_ 465 KSGVFREGIGYAVEAVTAYKTIVFNYKGKGVW 496 (499)
T ss_dssp TTEESCBSTTTTHHHHEEEEEEEEECTTSSSC
T ss_pred cCcCCCCCHHHHHHHhhCEEEEEEcCCCCCCC
Confidence 9999999999999999999999999863 444
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=4.2e-81 Score=629.63 Aligned_cols=406 Identities=28% Similarity=0.376 Sum_probs=367.3
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCcc----CCCCCCCceeE
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT----APADGPYHVQT 76 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~----~~~~~~~~~~~ 76 (423)
+|.++|.++|+++++.|++++++|++++++|+|||..++...|+..+++.+++++..+....... .....+...++
T Consensus 19 ~s~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~GK~~~ea~~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (446)
T d1ad3a_ 19 RSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHVLEELDTTIKELPDWAEDEPVAKTRQTQQDDLYI 98 (446)
T ss_dssp GCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTHHHHHHHHHHHHHHHHHHHSCEECCCCSTTTTSEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCCCCCCcceEE
Confidence 47899999999999999999999999999999999999876799999999998887665433221 11223456788
Q ss_pred eeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhc
Q 014515 77 LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALAS 156 (423)
Q Consensus 77 ~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l~~ 156 (423)
.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++++. +|+++++++.+.+.+. ..+.
T Consensus 99 ~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~vi~Kps~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~- 175 (446)
T d1ad3a_ 99 HSEPLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQY-MDQNLYLVVKGGVPET-TELL- 175 (446)
T ss_dssp EEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHH-SCTTTEEECCCSHHHH-HHHT-
T ss_pred EeecceeEecccccccccccccccccccchhcccccccccceecccccccccccccc-ccccccccccccchhh-hhhc-
Confidence 999999999999999999999999999999999999999999999999999998775 9999999998865544 3344
Q ss_pred ccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeCcc
Q 014515 157 HMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 236 (423)
Q Consensus 157 ~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~ 236 (423)
++++|.|.||||+.+|+.|.+.+++ +++|+++|+|||||+||++|||++.|++.+++++|.++||.|+++++||||+++
T Consensus 176 ~~~~~~v~fTGs~~~G~~i~~~aa~-~~~~~~lElgG~np~iV~~dADl~~Aa~~iv~~~~~~~GQ~C~a~~rv~v~~~i 254 (446)
T d1ad3a_ 176 KERFDHIMYTGSTAVGKIVMAAAAK-HLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSI 254 (446)
T ss_dssp TSCCSEEEEESCHHHHHHHHHHHHT-TTCCEEEECCCCCEEEECSSSCHHHHHHHHHHHHHTTTTCCTTSCCEEEECGGG
T ss_pred ccccCceEEECcHHHHHHHHHHHHh-cCCcEEEECCCcCcEEEecCCchHHHHHHHHHHHhcCCCCccccCCccccccch
Confidence 5689999999999999999999987 789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCccc
Q 014515 237 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDML 316 (423)
Q Consensus 237 ~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~ 316 (423)
+++|+++|.+.++.+ +|+|.++++++||+++..+++++.++++++ +...|+. .+..+.|+.|||+.+++++|+
T Consensus 255 ~~~f~~~l~~~~~~~-~g~~~~~~~~~gp~i~~~~~~~~~~~~~~a-----~~~~g~~-~~~~~~~~~Ptil~~v~~~~~ 327 (446)
T d1ad3a_ 255 QNQIVEKLKKSLKDF-YGEDAKQSRDYGRIINDRHFQRVKGLIDNQ-----KVAHGGT-WDQSSRYIAPTILVDVDPQSP 327 (446)
T ss_dssp HHHHHHHHHHHHHHH-HCSCGGGCTTSCCCSCHHHHHHHHHTTTTS-----CEEECCC-EETTTTEECCEEECSCCTTSG
T ss_pred hHHHHHhhhhhhhee-ecccccccccccchhhhhhhhhhhccccch-----hccccee-ecCCCCCcCCEEEECCCCCCH
Confidence 999999999998887 899999999999999999999998887643 4444443 334678999999999999999
Q ss_pred ccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC--CCCCCCCCCCCCCC
Q 014515 317 IAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSG 394 (423)
Q Consensus 317 ~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~pfgG~~~SG 394 (423)
+++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+++++.++++|+|+||+++. ..+.+||||+|.||
T Consensus 328 ~~~eE~FgPVl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG 407 (446)
T d1ad3a_ 328 VMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGNSG 407 (446)
T ss_dssp GGTSCCCSSEECEEECSSHHHHHHHHHTSCCCSEEEEECSCHHHHHHHHTTCCCSEEEESSSSGGGGCTTSCCCCCGGGE
T ss_pred HHhCcccCcceEEEEeccHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEEEeCCccCCCCCCCCccccccce
Confidence 9999999999999999999999999999999999999999999999999999999999998643 55789999999999
Q ss_pred CCCcchHHHHHhhheeeEEEEec
Q 014515 395 QGREKGSYSLSNYLQVKAVVTAL 417 (423)
Q Consensus 395 ~g~~~g~~~l~~~~~~k~v~~~~ 417 (423)
+|+++|.+|+++||+.|+|+++.
T Consensus 408 ~G~~~g~~~l~~ft~~k~v~~~~ 430 (446)
T d1ad3a_ 408 MGAYHGKKSFETFSHRRSCLVKS 430 (446)
T ss_dssp ECCCSTHHHHHHTEEEEEEEECC
T ss_pred eccchHHHHHHHHhceeEEEEcc
Confidence 99999999999999999999874
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Probab=100.00 E-value=5.7e-78 Score=613.09 Aligned_cols=410 Identities=34% Similarity=0.506 Sum_probs=378.7
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCcc-----C-CCCCCCce
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT-----A-PADGPYHV 74 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~-----~-~~~~~~~~ 74 (423)
+|.++|.++|+++++.|++++++|++++++|+|||..++.. |+...+..++++........... . ....+...
T Consensus 58 ~s~~~R~~iL~~~a~~L~~~~~~la~~~~~e~Gk~~~~a~~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (474)
T d1euha_ 58 LSYIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAVS-EVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIA 136 (474)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEE
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCcchhcc-ccchhHHHHHHHHHHHhhhhcccccccccccccCCcee
Confidence 58899999999999999999999999999999999999875 99999999998887654332211 1 12234556
Q ss_pred eEeeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHh
Q 014515 75 QTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAAL 154 (423)
Q Consensus 75 ~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v~~~~~~~~~~l 154 (423)
+.+++|+|||++|+|||+|+...+..+++||++||+||+|||+.+|.++.++.+++.++|+|+|++|++++++.++++.|
T Consensus 137 ~~~r~P~GVV~~I~p~n~P~~~~~~~~~~aL~aGN~vV~Kps~~~~~~~~~l~~~~~eaglP~gv~~~i~g~~~~~~~~L 216 (474)
T d1euha_ 137 VVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYI 216 (474)
T ss_dssp EEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHH
T ss_pred EEEeeceeEEEEeccccccchhhhhhchhhhhccccceecccccchHHHHHHHHHHHHhCCCcCeEEEccCChHHHHHHH
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999888899999
Q ss_pred hcccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHhccCCcccCCCeEEEeC
Q 014515 155 ASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHE 234 (423)
Q Consensus 155 ~~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~ 234 (423)
..||+++.|.||||+.+++.+.+.++ .+|+++|+||+||+||++|||++.|++.+++++|.++||.|+++++||||+
T Consensus 217 ~~~~~v~~v~ftGs~~~~~~i~~~a~---~k~~~~e~gG~~~~iV~~dAdl~~aa~~i~~~~~~~~Gq~C~a~~~i~v~~ 293 (474)
T d1euha_ 217 VEHQAVNFINFTGSTGIGERIGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVME 293 (474)
T ss_dssp HHCTTCCEEEEESCHHHHHHHHHHTT---TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEH
T ss_pred HhCCCccEEEecCccccccchhhhcc---cceEEEecCCcceEEEECCCchhhHHHHHHHHHhhCCCCccccccccchhh
Confidence 99999999999999999999998754 589999999999999999999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCceeecEEEecCCCc
Q 014515 235 SVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDD 314 (423)
Q Consensus 235 ~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~ 314 (423)
+++++|++.++++...++.|++.+.. .++|++...+.+++.+.+......++..+.++. ..|+|++|||+..++++
T Consensus 294 ~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~Ptvl~~~~~~ 369 (474)
T d1euha_ 294 SVADELVEKIREKVLALTIGNPEDDA-DITPLIDTKSADYVEGLINDANDKGATALTEIK---REGNLICPILFDKVTTD 369 (474)
T ss_dssp HHHHHHHHHHHHHHHTSCBSCGGGTC-SBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCC---EETTEECCEEEESCCTT
T ss_pred hhhhhhhHhhhhhhhhccccCccccc-ccccccchHHHHHHHHHHHhhhcccccccccCC---CCCCCcCCEEEecCCCc
Confidence 99999999999999999999998765 578999999999999999999999888776554 36899999999999999
Q ss_pred ccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC-CCCCCCCCCCCCC
Q 014515 315 MLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV-FDAAIPFGGYKQS 393 (423)
Q Consensus 315 ~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~pfgG~~~S 393 (423)
+.+++||+||||++|++|+|+||||+++|++++||+++|||+|.+.+++++.++++|+|+||++.. ..+.+||||+|+|
T Consensus 370 ~~~~~eE~fgPvl~v~~~~~~deai~~~n~~~~glta~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfGG~~~S 449 (474)
T d1euha_ 370 MRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKS 449 (474)
T ss_dssp SGGGTSCCCSSEEEEEEESCHHHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCCSTTSCBCCEETT
T ss_pred chhhhcccCCcEEEEEEeCCHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHhCCEEEEEEECCCCCCCCCCCccccccC
Confidence 999999999999999999999999999999999999999999999999999999999999998754 3567999999999
Q ss_pred CCCCcchHHHHHhhheeeEEEEecC
Q 014515 394 GQGREKGSYSLSNYLQVKAVVTALK 418 (423)
Q Consensus 394 G~g~~~g~~~l~~~~~~k~v~~~~~ 418 (423)
|+|+++|++|+++||+.|+|+++.+
T Consensus 450 G~G~~~g~~~l~~~~~~k~v~~~~~ 474 (474)
T d1euha_ 450 GAGIQGVKYSIEAMTTVKSVVFDIK 474 (474)
T ss_dssp EESCBSHHHHHHHTEEEEEEEEECC
T ss_pred ccCccCHHHHHHHhCcEEEEEEecC
Confidence 9999999999999999999998764
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Probab=100.00 E-value=1.3e-70 Score=560.47 Aligned_cols=396 Identities=21% Similarity=0.304 Sum_probs=333.0
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhchHHHHHHHHHHHHHHhhhhcCccC------C---CCCC
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA------P---ADGP 71 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~------~---~~~~ 71 (423)
+|.++|.++|+++++.|++++++|++++++|+|||..++.. |+..+++.++|++++.++...... + ...+
T Consensus 45 ~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gkp~~~a~~-Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (504)
T d1ez0a_ 45 LNNSKRASLLRTIASELEARSDDIIARAHLETALPEVRLTG-EIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPK 123 (504)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCB
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHhhhccccccccccccccccCcc
Confidence 58899999999999999999999999999999999999875 999999999999988766443221 1 1123
Q ss_pred CceeEeeccceeEEEEccCchhHHhH--HHhhhhhhccCCeEEEeCCCCchHHHHHHHH----HHHHcCCCCCcEEEEeC
Q 014515 72 YHVQTLHEPIGVAGQIIPWNFPLLMF--AWKVGPALACGNTIVLKTAEQTPLSALYVSK----LLHEAGLPPGVLNIVSG 145 (423)
Q Consensus 72 ~~~~~~~~P~Gvv~~i~p~n~P~~~~--~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~----~l~~ag~P~g~v~~v~~ 145 (423)
...+..+.|+|||++|+|||||+... ..++++||++||+||+|||+.+|.++.++.+ ++.++|+|+|++|+++|
T Consensus 124 ~~~~~~~~P~GvV~~I~PwNfPl~~~~~~~~~a~ALaaGN~VVlKPs~~tp~ta~~~~~li~~a~~~aGlP~Gv~~~v~g 203 (504)
T d1ez0a_ 124 PDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQG 203 (504)
T ss_dssp CCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECC
T ss_pred cceeEEEecCceEEEEecccccchhhhhhHHHHHHHHHhccceecCcccccchhhhhhhHHHHHhhhhccccCceecccc
Confidence 46678889999999999999998654 4689999999999999999999999877654 45677999999999999
Q ss_pred CchhHHHHhhcccCcceEeeecCchHHHHHHHHHhhCCCCce--EEecCCcceEEEcCCCCHHHHH--HHHHHHHHhccC
Q 014515 146 YGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPV--TLELGGKSPFIVCEDADVDKAA--ELAHYALFFNQG 221 (423)
Q Consensus 146 ~~~~~~~~l~~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~--~~e~gg~~~~iv~~~ad~~~aa--~~iv~~~~~~~G 221 (423)
++.+.++.|++||+|++|+||||+.+|+.|.+.+++ +++|+ ++|+|||||+||++|||++.|+ +.++.++|.|+|
T Consensus 204 ~~~~~g~~L~~~p~v~~V~FTGS~~~g~~i~~~aa~-~~~~~~l~~ElGGknp~iV~~dAd~~~Aa~~~~~~~~~~~~~G 282 (504)
T d1ez0a_ 204 NQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHE-RPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCG 282 (504)
T ss_dssp SCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHH-SSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGG
T ss_pred cccccccccccccccceeeeccchHHHHHHHhhhhc-ccccccccccccccccccccccccHHHHhhhhccccchhhccC
Confidence 888999999999999999999999999999999988 66664 5599999999999999999875 479999999999
Q ss_pred CcccCCCeEEEeCccH-HHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCC
Q 014515 222 QCCCAGSRTFVHESVY-DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 300 (423)
Q Consensus 222 q~C~a~~~v~V~~~~~-~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g 300 (423)
|.|++++++||+++.+ +.|++.+++.++. .++++.+||+++..+++++ ++.+...|+.+..|+.. +
T Consensus 283 Q~C~a~~rv~v~~~~~~~~~~~~~~~~~~~------~~~~~~~gp~i~~~~~~~v---i~~~~~~~~~~~~~~~~----~ 349 (504)
T d1ez0a_ 283 QFCTKPGVVFALNTPETQAFIETAQSLIRQ------QSPSTLLTPGIRDSYQSQV---VSRGSDDGIDVTFSQAE----S 349 (504)
T ss_dssp CCTTCCCEEEEESSHHHHHHHHHHHHHHHH------CCCBCCSSHHHHHHHHHHH---HHHHTSTTEEEEECCCC----T
T ss_pred ccccccccccchhhhhHHHHhhhhhhhhhh------cccccccccchhhhhhhhh---hhhhhhhhhhccccccc----c
Confidence 9999999999888865 5677777665543 2457789999998887765 55666788888888763 3
Q ss_pred ceeecEEEe---cCCCcccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecC--CHHHHHHHHHhcc--eeEE
Q 014515 301 YYIKPTVFT---GVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH--NLDTANTLMRALR--VGSV 373 (423)
Q Consensus 301 ~~~~Ptvl~---~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~--d~~~~~~~~~~l~--~g~v 373 (423)
.+..|+++. ++..++++++||+||||++|++|+|+||||+++|+++|||++||||+ |..++.+++++|+ +|+|
T Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~eE~FGPvl~i~~~~~~~eai~~an~~~~gL~a~I~t~d~d~~~a~~~~~~l~~~aG~v 429 (504)
T d1ez0a_ 350 PCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRL 429 (504)
T ss_dssp TSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEE
T ss_pred cccCCccccccccccccchhhcccccCCeeeeeecCCHHHHHHHHHCCCCCceEEEEecchhHHHHHHHHHHHhCCccEE
Confidence 334444443 23356889999999999999999999999999999999999999996 5568899999996 8999
Q ss_pred EEcCcCCC-------CCCCCCCCCCCCCCCCcchHHHHHhhheeeE
Q 014515 374 WINCFDVF-------DAAIPFGGYKQSGQGREKGSYSLSNYLQVKA 412 (423)
Q Consensus 374 ~iN~~~~~-------~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~ 412 (423)
+||++++. ..+.||||.+.||.| +.|.+++++|+++.+
T Consensus 430 ~iN~~~tG~~v~~~~~~ggpf~g~~~sg~~-~~G~~~i~~f~r~v~ 474 (504)
T d1ez0a_ 430 VFNGWPTGVEVGYAMVHGGPYPASTHSAST-SVGAEAIHRWLRPVA 474 (504)
T ss_dssp EESSCSSCCCCSSSCCCCCSTTSCSCSSCC-SSSGGGGGGGEEEEE
T ss_pred EEcCCcccceecCcCCCCCCCCCcCCCCCC-cchHHHHHHHhchhh
Confidence 99987541 134588888999955 468999999988754
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=5.1e-61 Score=479.43 Aligned_cols=368 Identities=19% Similarity=0.175 Sum_probs=292.6
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhch------------HHHHHHHHHHHHHHhhhhcCccCCC
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTE------------VPMTTRLFRYYAGWADKIQGLTAPA 68 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~~e~Gk~~~~~~~~e------------v~~~~~~l~~~~~~~~~~~~~~~~~ 68 (423)
+|.++|+++|+++++.|++|+++|++++++|+||+..++.. | +..+++.+++++...+.......+.
T Consensus 20 ~s~~eR~~iL~k~a~~l~~~~~eia~~~~~e~gk~~~~~~~-e~~~~rl~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 98 (414)
T d1o20a_ 20 ATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVK-ESLVDRLALNDKRIDEMIKACETVIGLKDPVGEVIDSW 98 (414)
T ss_dssp CCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCC-HHHHHHHCCCHHHHHHHHHHHHHHHHSCCCTTCEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhHHhcccc-HHHHHHHhccHHHHHHHHHHHHHHHHhhhhcccccccc
Confidence 57899999999999999999999999999999999877643 3 5556667777766544444433332
Q ss_pred CCCCceeEeeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHHHc----CCCCCcEEEEe
Q 014515 69 DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNIVS 144 (423)
Q Consensus 69 ~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~~a----g~P~g~v~~v~ 144 (423)
.........+.|+|+++++.|||||+..+++++++||++||+||+|||+.+|.++..+.+++.++ |+|.++++.+.
T Consensus 99 ~~~~~~~~~~~~~gv~~~~~p~n~p~~~~~~~~~~alaaGN~vvlKps~~tp~~~~~~~~l~~~a~~~~~~~~~~~~~~~ 178 (414)
T d1o20a_ 99 VREDGLRIARVRVPIGPIGIIYESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEFIE 178 (414)
T ss_dssp ECTTSCEEEEEEEECCCEEEECCSCTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHHTTSSSCGGGEEECC
T ss_pred ccccccceeecccccccccccccCcHHHhhhccchheecccchhcccccccccccchhhhHHHhhhhhcccccccccccc
Confidence 23345677889999999999999999999999999999999999999999999999999998877 45555577776
Q ss_pred CCchhHHHHhhcccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcc-eEEEcCCCCHHHHHHHHHHHHHhccCCc
Q 014515 145 GYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKS-PFIVCEDADVDKAAELAHYALFFNQGQC 223 (423)
Q Consensus 145 ~~~~~~~~~l~~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~-~~iv~~~ad~~~aa~~iv~~~~~~~Gq~ 223 (423)
+.+.+....+.. .+.+.++||+..+..+.+.+++ ..+++++|+||+| ++||++|||++.|++.+++++|.+ ||.
T Consensus 179 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~v~~~a~~-~~~~~~le~gGgn~~viv~~dAd~~~A~~~~~~~~~~~-gq~ 253 (414)
T d1o20a_ 179 NTDRSLVLEMIR---LREYLSLVIPRGGYGLISFVRD-NATVPVLETGVGNCHIFVDESADLKKAVPVIINAKTQR-PGT 253 (414)
T ss_dssp CCCTHHHHHHTT---CTTTCSEEEECSCHHHHHHHHH-HCSSCBCCCCCCCEEEEECTTSCHHHHHHHHHHHHHSC-TTS
T ss_pred ccchhhhhhccc---ccccCeEEEcccHHHHHHHhhh-ccccceecccCCCCCeecccccchhhhhhHHHhhhhcC-Ccc
Confidence 655555555544 4556666666667777777776 4567777777655 688999999999999999999876 999
Q ss_pred ccCCCeEEEeCccHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCCCCcee
Q 014515 224 CCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYI 303 (423)
Q Consensus 224 C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~ 303 (423)
|++++++|||++++|+|+++|.+...+..++.+.++.. ..+
T Consensus 254 C~a~~r~~V~~~i~d~f~~~l~~~~~~~~~~~~~~~~~---------------------------------------~~~ 294 (414)
T d1o20a_ 254 CNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVRGCEKT---------------------------------------REI 294 (414)
T ss_dssp TTSEEEEEEEHHHHHHHHHHHHHHHHHTTCEEEECHHH---------------------------------------HHH
T ss_pred cccccccchhHHHHHHHHHHHhHHHHHcCCccccchhh---------------------------------------hhh
Confidence 99999999999999999999999887765543322111 011
Q ss_pred ecEEEecCCCcccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCC
Q 014515 304 KPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDA 383 (423)
Q Consensus 304 ~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~ 383 (423)
.+.+... ....+++|+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|.|+||+.+.+..
T Consensus 295 ~~~~~~~---~~~~~~~E~FgPvl~v~~~~~~dEAI~~aN~~~yGLsa~I~T~d~~~a~~~~~~i~~G~V~IN~~~~~~~ 371 (414)
T d1o20a_ 295 VPDVVPA---TEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTRFTD 371 (414)
T ss_dssp STTSEEC---CGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGGCS
T ss_pred cccceec---ccccCCceeeeeEEEEEEeCCHHHHHHHHhcCCCCCcEEEEeCCHHHHHHHHHhCCeeEEEEeCCCcCCC
Confidence 1112211 1234679999999999999999999999999999999999999999999999999999999999776666
Q ss_pred CCCCCCCCCCCCC--Cc--chHHHHHhhheeeEEEEe
Q 014515 384 AIPFGGYKQSGQG--RE--KGSYSLSNYLQVKAVVTA 416 (423)
Q Consensus 384 ~~pfgG~~~SG~g--~~--~g~~~l~~~~~~k~v~~~ 416 (423)
..|||+.|+||+| +. +|++|+++||+.|+|+++
T Consensus 372 ~~~~g~g~~~G~~~~~~~~~G~~gl~~~t~~K~vv~~ 408 (414)
T d1o20a_ 372 GGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLG 408 (414)
T ss_dssp TTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEEC
T ss_pred CCCCCCCCceeccCCCCCCCchhHHHHhCeEEEEEEC
Confidence 6677766666653 33 389999999999998764
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.8e-50 Score=402.55 Aligned_cols=381 Identities=16% Similarity=0.156 Sum_probs=263.6
Q ss_pred CCHHHHHHHHHHHHHHHHHcHHHHHHHHH------HHcCCChhhhh------hchHHHHHHHHHHHHHHhhhhcCcc--C
Q 014515 1 MTAYERSKIILRFADLLERHNDEIAALET------WDNGKPFEQSA------QTEVPMTTRLFRYYAGWADKIQGLT--A 66 (423)
Q Consensus 1 ~~~~~R~~~L~~la~~l~~~~~~l~~~~~------~e~Gk~~~~~~------~~ev~~~~~~l~~~~~~~~~~~~~~--~ 66 (423)
+|.++|.++|+++++.|++|.++|+++.. ++.|++..... ...+...++.++..+.+.++..... .
T Consensus 22 ~s~~~R~~iL~~~a~~L~~~~~eI~~aN~~Dl~~a~~~g~~~~~idRL~l~~~~ri~~~~~~l~~i~~~~dpvg~~~~~~ 101 (436)
T d1vlua_ 22 ISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQGIKDVAELEDPVGKVKMAR 101 (436)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHHHHHHHHSCCSSSCEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHcCCcHHHHHHHhcCchHHHHHHHHHHHHHHhccccceeEeeee
Confidence 57899999999999999999999988644 44565532110 0124444444554443322221110 1
Q ss_pred CCCCCCceeEeeccceeEEEEccCchhHHhHHHhhhhhhccCCeEEEeCCCCchHHHHHHHHHHH--------HcCCCCC
Q 014515 67 PADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH--------EAGLPPG 138 (423)
Q Consensus 67 ~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL~aGN~vi~kps~~~~~~~~~l~~~l~--------~ag~P~g 138 (423)
..+.+...+..+.|+||+++| |+++| ..++...+.||++||+||+||++.++.++..+.++++ ++|+|++
T Consensus 102 ~~~~gl~~~~~~~P~GVigiI-~e~~P-~vt~~~~~lalksGNavIlk~~~~a~~s~~~l~~~~~~al~~a~~~aGlP~~ 179 (436)
T d1vlua_ 102 ELDDGLTLYQVTAPVGVLLVI-FESRP-EVIANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETGVPVG 179 (436)
T ss_dssp EEETTEEEEEEEEECCEEEEE-ESSCT-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHHHHHHHHHHHHHHHCCCTT
T ss_pred eccccceEEEeeeeeeeeecc-ccccc-hhhhhhhhcccccCCcceecCCcccccCHHHHHHHHHHhhhhhccccCCCCc
Confidence 123456778889999999988 66777 5667788899999999999999999999988877664 5699999
Q ss_pred cEEEEeCCchhHHHHhhcccCcceEeeecCchHHHHHHHHHhhCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHHHHh
Q 014515 139 VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFF 218 (423)
Q Consensus 139 ~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~e~gg~~~~iv~~~ad~~~aa~~iv~~~~~ 218 (423)
+++++++ +.+.++.|..|++||.|+||||...++.+.+. ..+|++.+++|++|+||++|||++.|++.++.++|.
T Consensus 180 ~i~~v~~-~~~v~~~l~~~~~Id~ii~tGg~~lv~~v~~~----~~~pvi~~~~G~~~~~Vd~~ADl~~A~~~i~~ak~~ 254 (436)
T d1vlua_ 180 SVQLIET-RQDVSDLLDQDEYIDLVVPRGSNALVRKIKDT----TKIPVLGHADGICSIYLDEDADLIKAKRISLDAKTN 254 (436)
T ss_dssp SEEECCC-C--CGGGGGCTTTCCEEEEESCHHHHHHHHHT----CCSCBTTBCSCCEEEEECTTCCHHHHHHHHHHTTCC
T ss_pred eEEEecc-hhHHHHHhccCCCCceEEEecCCceeeeeecc----ccceEEEecCCccceeecccccHHHHHHHHHHHhcc
Confidence 9999987 56788999999999999999999988877654 346999999999999999999999999999999999
Q ss_pred ccCCcccCCCeEEEeCccHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCcccCC
Q 014515 219 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA 298 (423)
Q Consensus 219 ~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~ 298 (423)
+.|| |++.++++||+++++.|...+....+. |. .+. .++ .++....+..... +. .
T Consensus 255 ~~g~-C~a~e~llV~e~ia~~~~~~~~~~~~~---gv------~l~--~~~----~~~~~~~~~~~~~------~~---~ 309 (436)
T d1vlua_ 255 YPAG-CNAMETLLINPKFSKWWEVLENLTLEG---GV------TIH--ATK----DLKTAYFDKLNEL------GK---L 309 (436)
T ss_dssp -----CCCCEEEEECTTSTTHHHHHHHHHHHH---CC------CBE--ECH----HHHHHHHHHHHHH------TC---C
T ss_pred CCCc-cccccceeecHhhhhhhhhhHHHHHhC---Cc------EEE--eCH----HHHHHhhhhhhhc------cc---c
Confidence 9996 889999999999998886655444332 11 000 112 2222222211111 11 1
Q ss_pred CCceeecEEEecCCCcccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCc
Q 014515 299 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCF 378 (423)
Q Consensus 299 ~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l~~g~v~iN~~ 378 (423)
.+....|++..... ..+.+|.|+|+++|++|+|+||||+++|+.++|||++|||+|.+.+++|++++++|.|+||++
T Consensus 310 ~~~~~~~~~~~~~~---~d~~~E~l~pvl~v~~v~~~eEAI~~in~~g~ghta~I~T~d~~~a~~F~~~vda~~V~vNas 386 (436)
T d1vlua_ 310 TEAIQCKTVDADEE---QDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVYWNAS 386 (436)
T ss_dssp CHHHHTTBC----------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHHHHHHHHHHCCCSEEEESSC
T ss_pred cccccccccCCCcc---cchhhhhhCcceeEEEECCHHHHHHHHHHhCCCCceEEEECCHHHHHHHHHhCCceEEEEcCC
Confidence 12223344433222 236899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCC----CCCcchHHHHHhhheeeEEEEe
Q 014515 379 DVFDAAIPFGGYKQSG----QGREKGSYSLSNYLQVKAVVTA 416 (423)
Q Consensus 379 ~~~~~~~pfgG~~~SG----~g~~~g~~~l~~~~~~k~v~~~ 416 (423)
+.+..+.+||--.+-| ..+.+|+.|++++|..|.++..
T Consensus 387 Trf~Dg~~~g~g~e~Gist~k~h~rGp~gl~~ltt~k~~~~g 428 (436)
T d1vlua_ 387 TRFADGFRYGFGAEVGISTSKIHARGPVGLDGLVSYQYQIRG 428 (436)
T ss_dssp GGGCC----------------------CCSGGGEEEEEEEEC
T ss_pred CccCCCCcccCcceeeEecCCCCCCCCcChHHhceEEEEEEC
Confidence 8888888887322223 3356899999999999988654
|
| >d1k75a_ c.82.1.2 (A:) L-histidinol dehydrogenase HisD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: L-histidinol dehydrogenase HisD domain: L-histidinol dehydrogenase HisD species: Escherichia coli [TaxId: 562]
Probab=96.81 E-value=0.2 Score=46.60 Aligned_cols=319 Identities=17% Similarity=0.129 Sum_probs=178.9
Q ss_pred HHHHHHHHHHHHHcHHHHHHHHHHHcCCC----hhhhhhchHHHHHH--------HHHHHHHHhhhhcCccCC------C
Q 014515 7 SKIILRFADLLERHNDEIAALETWDNGKP----FEQSAQTEVPMTTR--------LFRYYAGWADKIQGLTAP------A 68 (423)
Q Consensus 7 ~~~L~~la~~l~~~~~~l~~~~~~e~Gk~----~~~~~~~ev~~~~~--------~l~~~~~~~~~~~~~~~~------~ 68 (423)
.+..+.+.+.++++.|+-....++...+- +.-.. .|+..+.+ .++......+..+..+.+ .
T Consensus 30 ~~~V~~Ii~~Vr~~GD~AL~~yt~kFD~~~~~~l~Vs~-~Ei~~A~~~l~~el~~AI~~A~~rI~~FH~~Q~~~~~~~e~ 108 (431)
T d1k75a_ 30 TRTVNDILDNVKARGDEALREYSAKFDKTTVTALKVSA-EEIAAASERLSDELKQAMAVAVKNIETFHTAQKLPPVDVET 108 (431)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSSSCCCCSCSBCCH-HHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTTCCCCEEEEE
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHhCCCCccccccCH-HHHHHHHhhCCHHHHHHHHHHHHHHHHHHHhhcCCCceeec
Confidence 44566677777788888777777765422 11111 25544432 222333323322222211 1
Q ss_pred CCCCceeEeeccceeEEEEccCc---hhHHhHHHhhhhhhccCCeEE--EeCCCCchHHHHHHHHHHHHcCCCCCcEEEE
Q 014515 69 DGPYHVQTLHEPIGVAGQIIPWN---FPLLMFAWKVGPALACGNTIV--LKTAEQTPLSALYVSKLLHEAGLPPGVLNIV 143 (423)
Q Consensus 69 ~~~~~~~~~~~P~Gvv~~i~p~n---~P~~~~~~~l~~AL~aGN~vi--~kps~~~~~~~~~l~~~l~~ag~P~g~v~~v 143 (423)
..+......+.|+--|++..|.- ||-..++ ..+||..+|..=| ..|+...|. +.-+.+.+|+.+ +.
T Consensus 109 ~~Gv~~g~~~~PI~~VGlYVPGG~A~ypSsvLM-~aiPAkvAGV~~Ivv~tPp~~~~~----~l~aa~~~Gv~~----iy 179 (431)
T d1k75a_ 109 QPGVRCQQVTRPVASVGLYIPGGSAPLFSTVLM-LATPASIAGCKKVVLCSPPPIADE----ILYAAQLCGVQD----VF 179 (431)
T ss_dssp ETTEEEEEEEEECSEEEEECCCSSSCCHHHHHH-HHHHHHHHTCSEEEEEECSSCCHH----HHHHHHHTTCCE----EE
T ss_pred cCCceeeeeeeehhhheeeccCCCccchHHHHH-HHHHHHhcCCCceeEEeCCCCcch----HHHHHHHcCccc----eE
Confidence 24556778889999999999964 6655444 5789999998654 456554543 233344455442 33
Q ss_pred eCCchhHHHHhhc----ccCcceEeeecCchHHHHHHHHHhhCCCCceEE-ecCCcc--eEEEcCCCCHHHHHHHHHHHH
Q 014515 144 SGYGPTAGAALAS----HMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTL-ELGGKS--PFIVCEDADVDKAAELAHYAL 216 (423)
Q Consensus 144 ~~~~~~~~~~l~~----~~~v~~v~~tGs~~~~~~v~~~~a~~~~~~~~~-e~gg~~--~~iv~~~ad~~~aa~~iv~~~ 216 (423)
.-.|...-.+|.- -|+||.|+=.|+.-+..+=....+. .. .+-. -+-|.+ .+|-++++|.+.++..++.-+
T Consensus 180 ~~GGaqAIAAlAyGT~ti~~VdkI~GPGN~yV~~AK~~v~g~-~~-~vgID~~aGPSEv~viAD~~a~p~~iAaDllaQA 257 (431)
T d1k75a_ 180 NVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQR-LD-GAAIDMPAGPSEVLVIADSGATPDFVASDLLSQA 257 (431)
T ss_dssp ECCHHHHHHHHHHCCSSSCCCSEEECCCSHHHHHHHHHHHHS-TT-SCEESCCCCCCEEEEEECTTSCHHHHHHHHHHHH
T ss_pred ecCChHHHHHHhhccCcccccceeecCCchhhhhhHHhhccc-CC-ccccccccCCceEEEEecCCCCHHHHHHHHHhcc
Confidence 2224433344443 4689999999987654432222221 00 1111 123333 345556789998888877665
Q ss_pred HhccCCcccCCCeEEEeCc--cHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCHHHHHHHHHHHHHHHhCCCEEEeCCc
Q 014515 217 FFNQGQCCCAGSRTFVHES--VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGE 294 (423)
Q Consensus 217 ~~~~Gq~C~a~~~v~V~~~--~~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~~~~~~~~~~~~~i~~a~~~ga~~~~gg~ 294 (423)
=+... .+.++|..+ ..+++.+.+.+++..++- . + ..+...
T Consensus 258 EH~~~-----a~~ilvt~~~~l~~~v~~~i~~~l~~l~r---------------~---~----i~~~s~----------- 299 (431)
T d1k75a_ 258 EHGPD-----SQVILLTPAADMARRVAEAVERQLAELPR---------------A---E----TARQAL----------- 299 (431)
T ss_dssp TTCTT-----CEEEEEESCHHHHHHHHHHHHHHHHTCSS---------------C---H----HHHHHH-----------
T ss_pred CCccc-----ceeEEEeccHHHHHHHHHHHHHHhhhchH---------------H---H----HHHhhh-----------
Confidence 55433 344677665 334444444444432210 0 0 000000
Q ss_pred ccCCCCceeecEEEecCCCcccccccccccCeeEEEecCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhc-ceeEE
Q 014515 295 RLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL-RVGSV 373 (423)
Q Consensus 295 ~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~s~d~~~~~~~~~~l-~~g~v 373 (423)
+-. .++.++|++|+++++|..-. -...|.++|+. ++..++ ++|.|
T Consensus 300 --------------------------~~~----~ii~v~~~~ea~~~~N~~AP-EHL~l~~~~~~---~~~~~i~nAGsI 345 (431)
T d1k75a_ 300 --------------------------NAS----RLIVTKDLAQCVEISNQYGP-EHLIIQTRNAR---ELVDSITSAGSV 345 (431)
T ss_dssp --------------------------TTC----EEEECSSHHHHHHHHHHHCC-SEEEEESTTHH---HHGGGCCCCSEE
T ss_pred --------------------------ccc----eEEEecCHHHHHHHHHhhhH-HHHHHHhcCHH---HHHhhhhhcchh
Confidence 111 13457999999999998643 35888999886 566666 69999
Q ss_pred EEcCcCC---------CCCCCCCCCCCCCCCCCcchHHHHHhhheeeEEE
Q 014515 374 WINCFDV---------FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 414 (423)
Q Consensus 374 ~iN~~~~---------~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~v~ 414 (423)
++..+.. .++-+|= +|..|+.+..++..|....++.
T Consensus 346 flG~~sp~a~GDY~aGpnHvLPT-----~G~Ar~~sgLsv~dF~k~~s~~ 390 (431)
T d1k75a_ 346 FLGDWSPESAGDYASGTNHVLPT-----YGYTATCSSLGLADFQKRMTVQ 390 (431)
T ss_dssp EESTTCCHHHHHHTSSSCCCCCC-----TTGGGTCCCCCGGGGEEEEEEE
T ss_pred hcCCCCcchhhccccCCCccCCC-----CCceeecCCCCHHHeeeeeeEE
Confidence 9987543 1233444 5566666667778888876653
|