Citrus Sinensis ID: 014589

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420--
Protein Sequence
MLPSGVKDNQLRESNSQKVHPQPMEEAMNQNPEALEALVSKIFSNISSLKSAYIELQAAHTPYDPDKIQAADKLVISELKNLSELKHFYRENNPKPACISPQDSRLAAEIQEQQSLLKTYEVMVKKFQSEIQNKDSEIHQLQQHIEDANQKRVKLEKNLKLRGLSTKESEGSGGENGFFPVDLTPDLFTQAVEAAYKAIHDFSKPLINMMKAAGWDLDSAANSIEPNVVYAKRAHKKYAFESHICQRMFTGFQQEDFSVKSENLIVNKESFFHQFLALREIDPLDVLGQNPDSNFGKFCRSKYLAVLHPKMEASFFGNLDQRNFVMGGGHPRTPFYQAFLKLAKLIWLLHRLAYSFEPNVKVFQVNKGSEFSEVYMESVIKNLIIDEDDQKPTVGLMVMPGFWIGGSVIQSRVYLSGVKVAE
Secondary Structure (PSIPRED)
cccccccHHHHHHccccccccccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHcccccccccccccccHHHHHHHHHHHHccccccccccccccHHHcHHHHHHHHHHHHcccHHHHHcccccccHHHHHHHHHHHcccHHHHHHHcccccccHHHcccccccHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEcccccccccccccccccccccccccccEEEEEEEcccEEccEEEEEEEEEccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHccccccccccccHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHcccHHHHHHccccHHHHHHHHHHHHHHccHHHHHHHHccHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEcccccccHHHHHHccccccccccccccEEEEEEEccEEEccEEEEEEEEEEcEEEcc
Coil and Loop (DISEMBL)
mlpsgvkdnqlresnsqkvhpqpmeeamnqNPEALEALVSKIFSNISSLKSAYIELQaahtpydpdkiQAADKLVISELKNLSELKHfyrennpkpacispqdSRLAAEIQEQQSLLKTYEVMVKKFQSEIQNKDSEIHQLQQHIEDANQKRVKLEKNlklrglstkesegsggengffpvdltpDLFTQAVEAAYKAIHDFSKPLINMMKAAgwdldsaansiepnVVYAKRAHKKYAFESHICQRMftgfqqedfsvksenlivNKESFFHQFLAlreidpldvlgqnpdsnfgkfcRSKYLAVlhpkmeasffgnldqrnfvmggghprtpFYQAFLKLAKLIWLLHRLaysfepnvkVFQVNKGSEFSEVYMESVIKNLiideddqkptvglmvmpgfwiggSVIQSRVYLSGVKVAE
Flexible Loop (DISEMBL)
mlpsgvkdnqlresnsqkvhpqpmEEAMNQNPEALEALVSKIFSNISSLKSAYIELQAAHTPYDPDKIQAADKLVISELKNLSELKHFYRENNPKPACISPQDSRLAAEIQEQQSLLKTYEVMVKKFQSEIQNKDSEIHQLQQHIEDANQKRVKLEKNLKLRglstkesegsggenGFFPVDLTPDLFTQAVEAAYKAIHDFSKPLINMMKAAGWDLDSAANSIEPNVVYAKRAHKKYAFESHICQRMFTGFQQEDFSVKSENLIVNKESFFHQFLALREIDPLDVLGQNPDSNFGKFCRSKYLAVLHPKMEASFFGNLDQRNFVMGGGHPRTPFYQAFLKLAKLIWLLHRLAYSFEPNVKVFQVNKGSEFSEVYMESVIKNLIIDEDDQKPTVGLMVMPGFWIGGSVIQSRVYLSGVKVAE
Low Complexity Region (SEG)
MLPSGVKDNQLRESNSQKVHPQPMEEAMNQNPEALEALVSKIFSNISSLKSAYIELQAAHTPYDPDKIQAADKLVISELKNLSELKHFYRENNPKPACISPQDSRLAAEIQEQQSLLKTYEVMVKKFQSEIQNKDSEIHQLQQHIEDANQKRVKLEKNLKLRGLSTKesegsggeNGFFPVDLTPDLFTQAVEAAYKAIHDFSKPLINMMKAAGWDLDSAANSIEPNVVYAKRAHKKYAFESHICQRMFTGFQQEDFSVKSENLIVNKESFFHQFLALREIDPLDVLGQNPDSNFGKFCRSKYLAVLHPKMEASFFGNLDQRNFVMGGGHPRTPFYQAFLKLAKLIWLLHRLAYSFEPNVKVFQVNKGSEFSEVYMESVIKNLIIDEDDQKPTVGLMVMPGFWIGGSVIQSRVYLSGVKVAE
Disordered region (IsUnstruct)
************************************ALVSKIFSNISSLKSAYIELQAAHTPYDPDKIQAADKLVISELKNLSELKHFY***************************LKTYEVMV****************************************************GFFPVDLTPDLFTQAVEAAYKAIHDFSKPLINMMKAAGWDLDSAANSIEPNVVYAKRAHKKYAFESHICQRMFTGFQQEDFSVKSENLIVNKESFFHQFLALREIDPLDVLGQNPDSNFGKFCRSKYLAVLHPKMEASFFGNLDQRNFVMGGGHPRTPFYQAFLKLAKLIWLLHRLAYSFEPNVKVFQVNKGSEFSEVYMESVIKNLIIDEDDQKPTVGLMVMPGFWIGGSVIQSRVYLSGV****
Disordered Region (DISOPRED)
************************************ALVSKIFSNISSLKSAYIELQAAHTPYDPDKIQAADKLVISELKNLSE*********************************KTYEVMVKKFQS**QN*D***********************************************LTPDLFTQAVEAAYKAIHDFSKPLIN*************NSIEPNVVYAKRAHKKYAFESHICQRMFTGFQQEDFSVKSENLIVNKESFFHQFLALREIDPLDVLGQNPDSNFGKFCRSKYLAVLHPKMEASFFGNLDQRNFVMGGGHPRTPFYQAFLKLAKLIWLLHRLAYSFEPNVKVFQVNKGSEFSEVYME*****************GLMVMPGFWIGGSVIQSRVYLSGV****
Disordered Region (DISEMBL)
**************************AMNQNPEALEALVSKIFSNISSLKSAYIELQAAHTPYDPDKIQAADKLVISELKNLSELKHFYRENNPKPACISPQDSRLAAEIQEQQSLLKTYEVMVKKFQSEIQNKDSEIHQLQQHIEDANQKRVKLEKNLKLRGL*********GENGFFPVDLTPDLFTQAVEAAYKAIHDFSKPLINMMKAAGWDLDSAANSIEPNVVYAKRAHKKYAFESHICQRMFTGFQQEDFSVKSENLIVNKESFFHQFLALREIDPLDVLGQNPDSNFGKFCRSKYLAVLHPKMEASFFGNLDQRNFVMGGGHPRTPFYQAFLKLAKLIWLLHRLAYSFEPNVKVFQVNKGSEFSEVYMESVIKNLIIDEDDQKPTVGLMVMPGFWIGGSVIQSRVYLSGVKVAE
Disordered Region (DISPRO)
******************************NPEALEALVSKIFSNISSLKSAYIELQAAHTPYDPDKIQAADKLVISELKNLSELKHFYRENNPKPACISPQDSRLAAEIQEQQSLLKTYEVMVKKFQSEIQNKDSEIHQLQQHIEDANQKRVKLEKNLKLR**************GFFPVDLTPDLFTQAVEAAYKAIHDFSKPLINMMKAAGWDLDSAANSIEPNVVYAKRAHKKYAFESHICQRMFTGFQQEDFSVKSENLIVNKESFFHQFLALREIDPLDVLGQNPDSNFGKFCRSKYLAVLHPKMEASFFGNLDQRNFVMGGGHPRTPFYQAFLKLAKLIWLLHRLAYSFEPNVKVFQVNKGSEFSEVYMESVIKNLIIDEDDQKPTVGLMVMPGFWIGGSVIQSRVYLSGVKVA*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLPSGVKDNQLRESNSQKVHPQPMEEAMNQNPEALEALVSKIFSNISSLKSAYIELQAAHTPYDPDKIQAADKLVISELKNLSELKHFYRENNPKPACISPQDSRLAAExxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxLKLRGLSTKESEGSGGENGFFPVDLTPDLFTQAVEAAYKAIHDFSKPLINMMKAAGWDLDSAANSIEPNVVYAKRAHKKYAFESHICQRMFTGFQQEDFSVKSENLIVNKESFFHQFLALREIDPLDVLGQNPDSNFGKFCRSKYLAVLHPKMEASFFGNLDQRNFVMGGGHPRTPFYQAFLKLAKLIWLLHRLAYSFEPNVKVFQVNKGSEFSEVYMESVIKNLIIDEDDQKPTVGLMVMPGFWIGGSVIQSRVYLSGVKVAE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	422
255541240	421	conserved hypothetical protein [Ricinus	0.997	1.0	0.867	0.0
356506276	419	PREDICTED: uncharacterized protein LOC10	0.992	1.0	0.867	0.0
356496356	419	PREDICTED: uncharacterized protein LOC10	0.992	1.0	0.860	0.0
255637117	419	unknown [Glycine max]	0.992	1.0	0.857	0.0
225453995	422	PREDICTED: uncharacterized protein LOC10	1.0	1.0	0.876	0.0
224067705	422	predicted protein [Populus trichocarpa]	1.0	1.0	0.857	0.0
449432275	422	PREDICTED: uncharacterized protein LOC10	1.0	1.0	0.827	0.0
15225441	425	uncharacterized protein [Arabidopsis tha	0.992	0.985	0.775	0.0
78708421	422	expressed protein [Oryza sativa Japonica	1.0	1.0	0.715	0.0
125531711	422	hypothetical protein OsI_33323 [Oryza sa	1.0	1.0	0.713	0.0

>gi|255541240|ref|XP_002511684.1| conserved hypothetical protein [Ricinus communis] gi|223548864|gb|EEF50353.1| conserved hypothetical protein [Ricinus communis]

 Score =  776 bits (2003), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/422 (86%), Positives = 403/422 (95%), Gaps = 1/422 (0%)

Query: 1   MLPSGVKDNQLRESNSQKVHPQPMEEAMNQNPEALEALVSKIFSNISSLKSAYIELQAAH 60
           MLP+G+KDNQLRESNSQKVHPQPMEE++NQNPEA+EAL+SKIF+NISSLKSAYI+LQ AH
Sbjct: 1   MLPTGLKDNQLRESNSQKVHPQPMEESINQNPEAVEALISKIFTNISSLKSAYIQLQTAH 60

Query: 61  TPYDPDKIQAADKLVISELKNLSELKHFYRENNPKPACISPQDSRLAAEIQEQQSLLKTY 120
           TPYDP+KIQAADKLVISELKNLSELKHFYREN PKP C+SPQDSRLAAEIQEQQSLLKTY
Sbjct: 61  TPYDPEKIQAADKLVISELKNLSELKHFYRENYPKPVCVSPQDSRLAAEIQEQQSLLKTY 120

Query: 121 EVMVKKFQSEIQNKDSEIHQLQQHIEDANQKRVKLEKNLKLRGLSTKESEGSGGENGFFP 180
           EVMVKKFQSEIQNKDSEI QLQQHIE+A+QKR KLEKNLKLRGLSTKESE SG ENG+FP
Sbjct: 121 EVMVKKFQSEIQNKDSEILQLQQHIEEASQKRSKLEKNLKLRGLSTKESEASGDENGYFP 180

Query: 181 VDLTPDLFTQAVEAAYKAIHDFSKPLINMMKAAGWDLDSAANSIEPNVVYAKRAHKKYAF 240
           VDLTP+LF  AVEA++KAIHDFSKPLINMMKAAGWDLD+AANSIEP+VVYAKRAHKKYAF
Sbjct: 181 VDLTPELFISAVEASFKAIHDFSKPLINMMKAAGWDLDAAANSIEPDVVYAKRAHKKYAF 240

Query: 241 ESHICQRMFTGFQQEDFSVKSENLIVNKESFFHQFLALREIDPLDVLGQNPDSNFGKFCR 300
           ESHICQRMF+GFQQE FS+KS+++  +KESFF Q+LAL+E+DPLDVLGQNPDS+FGKFCR
Sbjct: 241 ESHICQRMFSGFQQESFSIKSDDVTFSKESFFPQYLALKEMDPLDVLGQNPDSSFGKFCR 300

Query: 301 SKYLAVLHPKMEASFFGNLDQRNFVMGGGHPRTPFYQAFLKLAKLIWLLHRLAYSFEPNV 360
           SKYL V+HPKMEASFFGNLDQRN++MGGGHPRTPFYQAFLKLAK IWLLH LA+SF+PNV
Sbjct: 301 SKYLVVVHPKMEASFFGNLDQRNYIMGGGHPRTPFYQAFLKLAKSIWLLHMLAFSFDPNV 360

Query: 361 KVFQVNKGSEFSEVYMESVIKNLIIDEDDQKPTVGLMVMPGFWIGGSVIQSRVYLSGVKV 420
           KVFQV +GSEFSEVYMESV+KNLI+DE +QKP VGLMVMPGFWIGGSVIQSRVYLSGVKV
Sbjct: 361 KVFQVKRGSEFSEVYMESVVKNLILDE-NQKPRVGLMVMPGFWIGGSVIQSRVYLSGVKV 419

Query: 421 AE 422
           AE
Sbjct: 420 AE 421

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356506276|ref|XP_003521912.1| PREDICTED: uncharacterized protein LOC100499972 isoform 1 [Glycine max] gi|356506278|ref|XP_003521913.1| PREDICTED: uncharacterized protein LOC100499972 isoform 2 [Glycine max] gi|356506280|ref|XP_003521914.1| PREDICTED: uncharacterized protein LOC100499972 isoform 3 [Glycine max]

 Score =  773 bits (1996), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/422 (86%), Positives = 396/422 (93%), Gaps = 3/422 (0%)

Query: 1   MLPSGVKDNQLRESNSQKVHPQPMEEAMNQNPEALEALVSKIFSNISSLKSAYIELQAAH 60
           MLP+G K+ QLRE+NSQKVHPQPMEEAMNQNPEA+E L+SK+F+NISSLKSAYI+LQAAH
Sbjct: 1   MLPTGAKETQLRENNSQKVHPQPMEEAMNQNPEAMETLISKVFTNISSLKSAYIQLQAAH 60

Query: 61  TPYDPDKIQAADKLVISELKNLSELKHFYRENNPKPACISPQDSRLAAEIQEQQSLLKTY 120
           TPYDPDKI  ADKLVISELKNLSELKHFYRENNPKP C+SPQDSRLAAEIQEQQSLLKTY
Sbjct: 61  TPYDPDKIHTADKLVISELKNLSELKHFYRENNPKPVCVSPQDSRLAAEIQEQQSLLKTY 120

Query: 121 EVMVKKFQSEIQNKDSEIHQLQQHIEDANQKRVKLEKNLKLRGLSTKESEGSGGENGFFP 180
           EVMVKKFQSEIQNKDSEIHQLQQ IE+A QKR KLEKNLKLRGLSTKESE    E GFFP
Sbjct: 121 EVMVKKFQSEIQNKDSEIHQLQQQIEEARQKRAKLEKNLKLRGLSTKESED---EIGFFP 177

Query: 181 VDLTPDLFTQAVEAAYKAIHDFSKPLINMMKAAGWDLDSAANSIEPNVVYAKRAHKKYAF 240
           VDLTPDLFT AVEAA KAIHDFSKPLINMMKAAGWDLD+AANSIEP+VVYAKRAHKKYAF
Sbjct: 178 VDLTPDLFTSAVEAAAKAIHDFSKPLINMMKAAGWDLDAAANSIEPDVVYAKRAHKKYAF 237

Query: 241 ESHICQRMFTGFQQEDFSVKSENLIVNKESFFHQFLALREIDPLDVLGQNPDSNFGKFCR 300
           E +ICQRMF+GF+QE+FSVKS+N+ V KESFFHQFLALRE+DPLD+LGQNPDS FGKFCR
Sbjct: 238 EFYICQRMFSGFEQENFSVKSDNITVTKESFFHQFLALREMDPLDMLGQNPDSIFGKFCR 297

Query: 301 SKYLAVLHPKMEASFFGNLDQRNFVMGGGHPRTPFYQAFLKLAKLIWLLHRLAYSFEPNV 360
           SKYL V+HPKMEASFFGNLDQRN+VMGGGHPRTPFYQAFLKL K IWLLHRLAYSFEPNV
Sbjct: 298 SKYLVVVHPKMEASFFGNLDQRNYVMGGGHPRTPFYQAFLKLTKSIWLLHRLAYSFEPNV 357

Query: 361 KVFQVNKGSEFSEVYMESVIKNLIIDEDDQKPTVGLMVMPGFWIGGSVIQSRVYLSGVKV 420
           KVFQV  GSEFS+VYMESV+KNLI+D++D+KP VGLMVMPGFWIGGSVIQS+VYLSG+KV
Sbjct: 358 KVFQVKGGSEFSDVYMESVVKNLIMDDNDEKPKVGLMVMPGFWIGGSVIQSKVYLSGMKV 417

Query: 421 AE 422
           AE
Sbjct: 418 AE 419

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356496356|ref|XP_003517034.1| PREDICTED: uncharacterized protein LOC100786595 [Glycine max]

 Score =  769 bits (1985), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/422 (86%), Positives = 393/422 (93%), Gaps = 3/422 (0%)

Query: 1   MLPSGVKDNQLRESNSQKVHPQPMEEAMNQNPEALEALVSKIFSNISSLKSAYIELQAAH 60
           MLP+G K+ QLRESNSQKVHPQP+EEAMNQNPEA+E L+SK+F NISSLKSAYIELQAAH
Sbjct: 1   MLPTGAKETQLRESNSQKVHPQPIEEAMNQNPEAMETLISKVFMNISSLKSAYIELQAAH 60

Query: 61  TPYDPDKIQAADKLVISELKNLSELKHFYRENNPKPACISPQDSRLAAEIQEQQSLLKTY 120
           TPYDPDKI  ADKLVISELKNLSELKHFYRENNPKP C+SPQDSRLAAEIQEQQSLLKTY
Sbjct: 61  TPYDPDKIHTADKLVISELKNLSELKHFYRENNPKPVCVSPQDSRLAAEIQEQQSLLKTY 120

Query: 121 EVMVKKFQSEIQNKDSEIHQLQQHIEDANQKRVKLEKNLKLRGLSTKESEGSGGENGFFP 180
           EVMVKKFQSEIQNKDSEIHQLQQ IE+A+QKR KLEKNLKLRGLSTKESE    ENGFFP
Sbjct: 121 EVMVKKFQSEIQNKDSEIHQLQQQIEEASQKRAKLEKNLKLRGLSTKESED---ENGFFP 177

Query: 181 VDLTPDLFTQAVEAAYKAIHDFSKPLINMMKAAGWDLDSAANSIEPNVVYAKRAHKKYAF 240
           VDLTPDLFT AVE A KAIHDFSKPLINMMKAAGWDLD+AANSIEP+VVYAKRAHKKYAF
Sbjct: 178 VDLTPDLFTSAVEVAAKAIHDFSKPLINMMKAAGWDLDAAANSIEPDVVYAKRAHKKYAF 237

Query: 241 ESHICQRMFTGFQQEDFSVKSENLIVNKESFFHQFLALREIDPLDVLGQNPDSNFGKFCR 300
           ES+ICQRMF+GF+QE+FSVK +N    KESFFHQFLALRE+DPLD+LGQNPDS FGKFCR
Sbjct: 238 ESYICQRMFSGFEQENFSVKLDNTTATKESFFHQFLALREMDPLDMLGQNPDSIFGKFCR 297

Query: 301 SKYLAVLHPKMEASFFGNLDQRNFVMGGGHPRTPFYQAFLKLAKLIWLLHRLAYSFEPNV 360
           SKYL V+HPKMEASFFGNLDQRN+VMGGGHPRTPFYQAFLKL K IWLLHRLAYSFEPNV
Sbjct: 298 SKYLVVVHPKMEASFFGNLDQRNYVMGGGHPRTPFYQAFLKLTKSIWLLHRLAYSFEPNV 357

Query: 361 KVFQVNKGSEFSEVYMESVIKNLIIDEDDQKPTVGLMVMPGFWIGGSVIQSRVYLSGVKV 420
           KVFQV  GSEFS+VYMESV+KNLI+D++D+KP +GLMVMPGFWIGGS+IQS+VYLSG+K 
Sbjct: 358 KVFQVKGGSEFSDVYMESVVKNLIMDDNDEKPKIGLMVMPGFWIGGSLIQSKVYLSGMKA 417

Query: 421 AE 422
           AE
Sbjct: 418 AE 419

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255637117|gb|ACU18890.1| unknown [Glycine max]

 Score =  768 bits (1983), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/422 (85%), Positives = 393/422 (93%), Gaps = 3/422 (0%)

Query: 1   MLPSGVKDNQLRESNSQKVHPQPMEEAMNQNPEALEALVSKIFSNISSLKSAYIELQAAH 60
           MLP+G K+ QLRESNSQKVHPQP+EEAMNQNPEA+E L+SK+F NISSLKSAYIELQAAH
Sbjct: 1   MLPTGAKETQLRESNSQKVHPQPIEEAMNQNPEAMETLISKVFMNISSLKSAYIELQAAH 60

Query: 61  TPYDPDKIQAADKLVISELKNLSELKHFYRENNPKPACISPQDSRLAAEIQEQQSLLKTY 120
           TPYDPDKI  ADKLVISELKNLSELKHFYRENNPKP C+SPQDSRLAAEIQEQQSLLKTY
Sbjct: 61  TPYDPDKIHTADKLVISELKNLSELKHFYRENNPKPVCVSPQDSRLAAEIQEQQSLLKTY 120

Query: 121 EVMVKKFQSEIQNKDSEIHQLQQHIEDANQKRVKLEKNLKLRGLSTKESEGSGGENGFFP 180
           EVMVKKFQSEIQNKDSEIHQLQQ IE+A+QKR KLEKNLKLRGLSTKESE    ENGFFP
Sbjct: 121 EVMVKKFQSEIQNKDSEIHQLQQQIEEASQKRAKLEKNLKLRGLSTKESED---ENGFFP 177

Query: 181 VDLTPDLFTQAVEAAYKAIHDFSKPLINMMKAAGWDLDSAANSIEPNVVYAKRAHKKYAF 240
           VDLTPDLFT AVE A KAIHDFSKPL+NMMKAAGWDLD+AANSIEP+VVYAKRAHKKYAF
Sbjct: 178 VDLTPDLFTSAVEVAAKAIHDFSKPLVNMMKAAGWDLDAAANSIEPDVVYAKRAHKKYAF 237

Query: 241 ESHICQRMFTGFQQEDFSVKSENLIVNKESFFHQFLALREIDPLDVLGQNPDSNFGKFCR 300
           ES+ICQRMF+GF+QE+FSVK +N    KESFFHQFLALRE+DPLD+LGQNPDS FGKFCR
Sbjct: 238 ESYICQRMFSGFEQENFSVKLDNTTATKESFFHQFLALREMDPLDMLGQNPDSIFGKFCR 297

Query: 301 SKYLAVLHPKMEASFFGNLDQRNFVMGGGHPRTPFYQAFLKLAKLIWLLHRLAYSFEPNV 360
           SKYL V+HPKMEASFFGNLDQRN+VMGGGHPRTPFYQAFLKL K IWLLHRLAYSFEPNV
Sbjct: 298 SKYLVVVHPKMEASFFGNLDQRNYVMGGGHPRTPFYQAFLKLTKSIWLLHRLAYSFEPNV 357

Query: 361 KVFQVNKGSEFSEVYMESVIKNLIIDEDDQKPTVGLMVMPGFWIGGSVIQSRVYLSGVKV 420
           KVFQV  GSEFS+VYMESV+KNLI+D++D+KP +GLMVMPGFWIGGS+IQS+VYLSG+K 
Sbjct: 358 KVFQVKGGSEFSDVYMESVVKNLIMDDNDEKPKIGLMVMPGFWIGGSLIQSKVYLSGMKA 417

Query: 421 AE 422
           AE
Sbjct: 418 AE 419

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225453995|ref|XP_002280629.1| PREDICTED: uncharacterized protein LOC100250526 isoform 2 [Vitis vinifera] gi|225453997|ref|XP_002280612.1| PREDICTED: uncharacterized protein LOC100250526 isoform 1 [Vitis vinifera]

 Score =  767 bits (1981), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/422 (87%), Positives = 397/422 (94%)

Query: 1   MLPSGVKDNQLRESNSQKVHPQPMEEAMNQNPEALEALVSKIFSNISSLKSAYIELQAAH 60
           MLP+GVK+ QLRESNSQKVHPQPMEEA NQ PEA+EAL+SKIF NISSLKSAYI+LQAAH
Sbjct: 1   MLPTGVKETQLRESNSQKVHPQPMEEATNQTPEAMEALISKIFMNISSLKSAYIQLQAAH 60

Query: 61  TPYDPDKIQAADKLVISELKNLSELKHFYRENNPKPACISPQDSRLAAEIQEQQSLLKTY 120
           TPY+PDKIQAADKLVISELKNLSELKHFYRE NPKP C+SPQDSRLAAEIQEQQ+LLKTY
Sbjct: 61  TPYEPDKIQAADKLVISELKNLSELKHFYREKNPKPICVSPQDSRLAAEIQEQQNLLKTY 120

Query: 121 EVMVKKFQSEIQNKDSEIHQLQQHIEDANQKRVKLEKNLKLRGLSTKESEGSGGENGFFP 180
           EVMVKKFQSEIQNKDSEI QLQQ I++ANQKRVKLEKNLKLRGLSTKESEGS  ENGFFP
Sbjct: 121 EVMVKKFQSEIQNKDSEILQLQQQIQEANQKRVKLEKNLKLRGLSTKESEGSVEENGFFP 180

Query: 181 VDLTPDLFTQAVEAAYKAIHDFSKPLINMMKAAGWDLDSAANSIEPNVVYAKRAHKKYAF 240
           VDLTPDLF   VEAA+KAIHDFSKPLINMMKAAGWDLD+AANSIEPNVVYAKRAHKKYAF
Sbjct: 181 VDLTPDLFISVVEAAFKAIHDFSKPLINMMKAAGWDLDAAANSIEPNVVYAKRAHKKYAF 240

Query: 241 ESHICQRMFTGFQQEDFSVKSENLIVNKESFFHQFLALREIDPLDVLGQNPDSNFGKFCR 300
           ESHICQRMF+GFQ E FS+KS+NL V KESFFHQFLALRE+DPLD LGQNPDS FGKFCR
Sbjct: 241 ESHICQRMFSGFQHESFSIKSDNLTVTKESFFHQFLALREMDPLDTLGQNPDSIFGKFCR 300

Query: 301 SKYLAVLHPKMEASFFGNLDQRNFVMGGGHPRTPFYQAFLKLAKLIWLLHRLAYSFEPNV 360
           SKYL V+HPKM+ASFFGNLDQRN+VMGGGHPRTPFYQAFLKLAK IWLLHRLAYSF+PNV
Sbjct: 301 SKYLVVVHPKMDASFFGNLDQRNYVMGGGHPRTPFYQAFLKLAKSIWLLHRLAYSFDPNV 360

Query: 361 KVFQVNKGSEFSEVYMESVIKNLIIDEDDQKPTVGLMVMPGFWIGGSVIQSRVYLSGVKV 420
           KVFQV +GSEFSEVYMESV+KNL++DE D+KP VGLMVMPGFWIGGSVIQ RVYLSG++V
Sbjct: 361 KVFQVKRGSEFSEVYMESVVKNLVMDESDEKPKVGLMVMPGFWIGGSVIQCRVYLSGMRV 420

Query: 421 AE 422
           AE
Sbjct: 421 AE 422

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224067705|ref|XP_002302528.1| predicted protein [Populus trichocarpa] gi|222844254|gb|EEE81801.1| predicted protein [Populus trichocarpa]

 Score =  767 bits (1980), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/422 (85%), Positives = 397/422 (94%)

Query: 1   MLPSGVKDNQLRESNSQKVHPQPMEEAMNQNPEALEALVSKIFSNISSLKSAYIELQAAH 60
           MLP+G+KDNQ RESN+QKVHPQPME++ NQNPEALEAL+SKIF+NISSLKSAYI+LQ+AH
Sbjct: 1   MLPTGLKDNQPRESNNQKVHPQPMEDSANQNPEALEALISKIFTNISSLKSAYIQLQSAH 60

Query: 61  TPYDPDKIQAADKLVISELKNLSELKHFYRENNPKPACISPQDSRLAAEIQEQQSLLKTY 120
           TPYDPDKIQAADK VISELKNLSELKHFYRENNPKP C+SPQDSRLAAEIQEQQSLLKTY
Sbjct: 61  TPYDPDKIQAADKDVISELKNLSELKHFYRENNPKPICVSPQDSRLAAEIQEQQSLLKTY 120

Query: 121 EVMVKKFQSEIQNKDSEIHQLQQHIEDANQKRVKLEKNLKLRGLSTKESEGSGGENGFFP 180
           EVMVKKFQSEIQNKDSEI QLQQ IE+ANQKR KLEKNLKLRGLSTKESEGSG E+GF+ 
Sbjct: 121 EVMVKKFQSEIQNKDSEILQLQQMIEEANQKRAKLEKNLKLRGLSTKESEGSGDESGFYS 180

Query: 181 VDLTPDLFTQAVEAAYKAIHDFSKPLINMMKAAGWDLDSAANSIEPNVVYAKRAHKKYAF 240
           VDLTPDLF  AVE A+KAIHDFSKPLINMMKAAGWDLD+AANSIE NVVYAKRAHKKYAF
Sbjct: 181 VDLTPDLFISAVETAFKAIHDFSKPLINMMKAAGWDLDAAANSIESNVVYAKRAHKKYAF 240

Query: 241 ESHICQRMFTGFQQEDFSVKSENLIVNKESFFHQFLALREIDPLDVLGQNPDSNFGKFCR 300
           ESHICQRMF+GFQ E+FS+K ++  V+KE+FFHQFL++RE+DPLD+LGQNPDS FGKFCR
Sbjct: 241 ESHICQRMFSGFQHENFSIKVDSGAVSKETFFHQFLSMREMDPLDMLGQNPDSAFGKFCR 300

Query: 301 SKYLAVLHPKMEASFFGNLDQRNFVMGGGHPRTPFYQAFLKLAKLIWLLHRLAYSFEPNV 360
           SKYL V+HPKMEASFFGNLDQRN++ GGGHPRTPFYQ FLKLAK IWLLHRLAYSF+PNV
Sbjct: 301 SKYLVVVHPKMEASFFGNLDQRNYINGGGHPRTPFYQVFLKLAKSIWLLHRLAYSFDPNV 360

Query: 361 KVFQVNKGSEFSEVYMESVIKNLIIDEDDQKPTVGLMVMPGFWIGGSVIQSRVYLSGVKV 420
           KVFQV +G+EFSEVYMESV+KNLI+DE+D KP VGLMVMPGFWIGGSVIQSRVYLSGVKV
Sbjct: 361 KVFQVKRGNEFSEVYMESVVKNLILDENDPKPRVGLMVMPGFWIGGSVIQSRVYLSGVKV 420

Query: 421 AE 422
           AE
Sbjct: 421 AE 422

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449432275|ref|XP_004133925.1| PREDICTED: uncharacterized protein LOC101216772 isoform 1 [Cucumis sativus] gi|449432277|ref|XP_004133926.1| PREDICTED: uncharacterized protein LOC101216772 isoform 2 [Cucumis sativus] gi|449432279|ref|XP_004133927.1| PREDICTED: uncharacterized protein LOC101216772 isoform 3 [Cucumis sativus] gi|449480035|ref|XP_004155781.1| PREDICTED: uncharacterized protein LOC101228678 isoform 1 [Cucumis sativus] gi|449480039|ref|XP_004155782.1| PREDICTED: uncharacterized protein LOC101228678 isoform 2 [Cucumis sativus] gi|449480043|ref|XP_004155783.1| PREDICTED: uncharacterized protein LOC101228678 isoform 3 [Cucumis sativus]

 Score =  738 bits (1904), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/422 (82%), Positives = 384/422 (90%)

Query: 1   MLPSGVKDNQLRESNSQKVHPQPMEEAMNQNPEALEALVSKIFSNISSLKSAYIELQAAH 60
           ML +  KDNQLRESN+QKVHPQPMEEAMNQ PEA+EAL+SK+F NISSLKSAYI+LQ AH
Sbjct: 1   MLLTEAKDNQLRESNNQKVHPQPMEEAMNQKPEAMEALISKLFVNISSLKSAYIQLQGAH 60

Query: 61  TPYDPDKIQAADKLVISELKNLSELKHFYRENNPKPACISPQDSRLAAEIQEQQSLLKTY 120
           TPYDP+KIQAADKLVISELK LSELKHFYRENNPKP C+SPQDSRLAAEIQEQQSLLKTY
Sbjct: 61  TPYDPEKIQAADKLVISELKKLSELKHFYRENNPKPVCVSPQDSRLAAEIQEQQSLLKTY 120

Query: 121 EVMVKKFQSEIQNKDSEIHQLQQHIEDANQKRVKLEKNLKLRGLSTKESEGSGGENGFFP 180
           EVMVKKFQSEIQNKDSEI QLQQ IE+ANQK+VKLEKNLKLRGLS KESEGS  E+G F 
Sbjct: 121 EVMVKKFQSEIQNKDSEILQLQQQIEEANQKKVKLEKNLKLRGLSMKESEGSADESGNFH 180

Query: 181 VDLTPDLFTQAVEAAYKAIHDFSKPLINMMKAAGWDLDSAANSIEPNVVYAKRAHKKYAF 240
           VDLTPDLF   VE A+KAIHDFSKPLINMMKAAGWDLD+AANS+EPNVVYAKRAHKKYAF
Sbjct: 181 VDLTPDLFISVVEGAFKAIHDFSKPLINMMKAAGWDLDAAANSVEPNVVYAKRAHKKYAF 240

Query: 241 ESHICQRMFTGFQQEDFSVKSENLIVNKESFFHQFLALREIDPLDVLGQNPDSNFGKFCR 300
           ESHICQRMF GFQ E FS+K +++ + KE FF QF++L+++DPLD+LGQNPDS FGKFCR
Sbjct: 241 ESHICQRMFCGFQHETFSIKVDDVALTKEDFFRQFISLKDMDPLDMLGQNPDSIFGKFCR 300

Query: 301 SKYLAVLHPKMEASFFGNLDQRNFVMGGGHPRTPFYQAFLKLAKLIWLLHRLAYSFEPNV 360
           SKYL V+HPKMEASFFGNLDQRN V GGGHPRTPFYQ FLKLAK IWLLHRLAYSF+P+V
Sbjct: 301 SKYLLVVHPKMEASFFGNLDQRNHVAGGGHPRTPFYQVFLKLAKAIWLLHRLAYSFDPSV 360

Query: 361 KVFQVNKGSEFSEVYMESVIKNLIIDEDDQKPTVGLMVMPGFWIGGSVIQSRVYLSGVKV 420
           KVFQV +G+EFS+VYM+SV+KNLIIDE D KP VGLMVMPGF IGG++IQSRVYLSGVKV
Sbjct: 361 KVFQVKRGNEFSDVYMDSVVKNLIIDESDLKPKVGLMVMPGFLIGGTIIQSRVYLSGVKV 420

Query: 421 AE 422
           AE
Sbjct: 421 AE 422

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15225441|ref|NP_182051.1| uncharacterized protein [Arabidopsis thaliana] gi|2583128|gb|AAB82637.1| hypothetical protein [Arabidopsis thaliana] gi|20268756|gb|AAM14081.1| unknown protein [Arabidopsis thaliana] gi|21281074|gb|AAM45055.1| unknown protein [Arabidopsis thaliana] gi|330255437|gb|AEC10531.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  694 bits (1790), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/428 (77%), Positives = 381/428 (89%), Gaps = 9/428 (2%)

Query: 1   MLPSGVKDNQLRESNS-QKVHPQPMEEAMNQNPEALEALVSKIFSNISSLKSAYIELQAA 59
           MLPSG+K+ QLRESN+ QKVHPQPMEE++NQNPEA+EAL+S +F NISSLKSAYIELQ+A
Sbjct: 1   MLPSGLKETQLRESNNNQKVHPQPMEESINQNPEAMEALISNLFGNISSLKSAYIELQSA 60

Query: 60  HTPYDPDKIQAADKLVISELKNLSELKHFYRENNPKPACISPQDSRLAAEIQEQQSLLKT 119
           HTPYDP+KIQAADK+VISELKNLSE+KHFYRENNPKP C+SPQDSRLAAEIQEQQSLLKT
Sbjct: 61  HTPYDPEKIQAADKVVISELKNLSEMKHFYRENNPKPVCVSPQDSRLAAEIQEQQSLLKT 120

Query: 120 YEVMVKKFQSEIQNKDSEIHQLQQHIEDANQKRVKLEKNLKLRGLSTKESEGSGGENGF- 178
           YEVMVKKFQSEIQNKDSEI Q+ Q IE+ANQKR+KLEKNLKLRG+ST  +EGS G+    
Sbjct: 121 YEVMVKKFQSEIQNKDSEITQMLQKIEEANQKRLKLEKNLKLRGMST--NEGSNGDGNMQ 178

Query: 179 FPVDLTPDLFTQAVEAAYKAIHDFSKPLINMMKAAGWDLDSAANSIEPNVVYAKRAHKKY 238
           FP DLT +L+    EAA KA+HDFSKPLINMMKAAGWDLDSAANSIEP+VVYAKR HKKY
Sbjct: 179 FP-DLTTELYVSTYEAAAKAVHDFSKPLINMMKAAGWDLDSAANSIEPDVVYAKRPHKKY 237

Query: 239 AFESHICQRMFTGFQQEDFSVKSENLIV----NKESFFHQFLALREIDPLDVLGQNPDSN 294
           AFES+ICQRMF+GFQQ++FSV SE+  V    + ++FF QFLAL+++DPLD LG NPDSN
Sbjct: 238 AFESYICQRMFSGFQQKNFSVNSESAAVMANDDTDTFFRQFLALKDMDPLDALGTNPDSN 297

Query: 295 FGKFCRSKYLAVLHPKMEASFFGNLDQRNFVMGGGHPRTPFYQAFLKLAKLIWLLHRLAY 354
           FG FCRSKYL ++HPKMEASFFGNLDQR++V GGGHPRT FYQAFLKLAK IW+LHRLAY
Sbjct: 298 FGIFCRSKYLLLVHPKMEASFFGNLDQRDYVTGGGHPRTAFYQAFLKLAKSIWILHRLAY 357

Query: 355 SFEPNVKVFQVNKGSEFSEVYMESVIKNLIIDEDDQKPTVGLMVMPGFWIGGSVIQSRVY 414
           SF+P  K+FQV KGSEFS+ YMESV+KN+++DE ++ P VGLMVMPGFWIGGSVIQSRVY
Sbjct: 358 SFDPAAKIFQVKKGSEFSDSYMESVVKNIVVDEKEENPRVGLMVMPGFWIGGSVIQSRVY 417

Query: 415 LSGVKVAE 422
           +SGVKV E
Sbjct: 418 VSGVKVLE 425

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|78708421|gb|ABB47396.1| expressed protein [Oryza sativa Japonica Group] gi|110289009|gb|ABG66055.1| expressed protein [Oryza sativa Japonica Group]

 Score =  647 bits (1669), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 302/422 (71%), Positives = 361/422 (85%)

Query: 1   MLPSGVKDNQLRESNSQKVHPQPMEEAMNQNPEALEALVSKIFSNISSLKSAYIELQAAH 60
           M+  G K++Q  +SN+QKVHPQP++E MNQN  +++ ++ +IF+NISSLKSAYI+LQ AH
Sbjct: 1   MVLPGSKESQNYDSNNQKVHPQPIDENMNQNMGSMDTMIGRIFNNISSLKSAYIQLQEAH 60

Query: 61  TPYDPDKIQAADKLVISELKNLSELKHFYRENNPKPACISPQDSRLAAEIQEQQSLLKTY 120
           TPYDPDKIQAAD+LVI EL  LSELKH YRE NPKP   +PQD+RL +EIQEQQ+LLKTY
Sbjct: 61  TPYDPDKIQAADQLVIEELTKLSELKHAYREKNPKPVAATPQDARLLSEIQEQQNLLKTY 120

Query: 121 EVMVKKFQSEIQNKDSEIHQLQQHIEDANQKRVKLEKNLKLRGLSTKESEGSGGENGFFP 180
           EVMVKKFQS+IQ +D+EI  LQQ I++A  ++ KLEK LK RGL  KESE S  E+ +F 
Sbjct: 121 EVMVKKFQSQIQTRDTEITHLQQQIDEAKLRKSKLEKKLKQRGLLNKESEESDDEDNYFS 180

Query: 181 VDLTPDLFTQAVEAAYKAIHDFSKPLINMMKAAGWDLDSAANSIEPNVVYAKRAHKKYAF 240
           ++LTP LFT AV+ AY++IHDFSKPLINMMKAAGWDLD+AAN+IEP VVY +RAHKKYAF
Sbjct: 181 IELTPSLFTSAVDNAYQSIHDFSKPLINMMKAAGWDLDAAANAIEPAVVYTRRAHKKYAF 240

Query: 241 ESHICQRMFTGFQQEDFSVKSENLIVNKESFFHQFLALREIDPLDVLGQNPDSNFGKFCR 300
           ES+ICQRMF GFQ+E FSVK+ N+ V+ E+FFHQFLA+R +DPLDVL QNPDS FGKFCR
Sbjct: 241 ESYICQRMFGGFQEESFSVKAANITVSNEAFFHQFLAVRAMDPLDVLSQNPDSVFGKFCR 300

Query: 301 SKYLAVLHPKMEASFFGNLDQRNFVMGGGHPRTPFYQAFLKLAKLIWLLHRLAYSFEPNV 360
           SKYL ++HPKME SFFGN+DQRN+VM GGHPRTPFYQAFLKLAK IWLLHRLAYSF+P V
Sbjct: 301 SKYLLLVHPKMEGSFFGNMDQRNYVMSGGHPRTPFYQAFLKLAKSIWLLHRLAYSFDPKV 360

Query: 361 KVFQVNKGSEFSEVYMESVIKNLIIDEDDQKPTVGLMVMPGFWIGGSVIQSRVYLSGVKV 420
           KVFQV KGS+FSE++MESV+KN+I+DE  ++P VGLMVMPGF IG SVIQSRVYLSGVK 
Sbjct: 361 KVFQVKKGSDFSEIHMESVVKNIILDEGAERPKVGLMVMPGFLIGTSVIQSRVYLSGVKS 420

Query: 421 AE 422
           A+
Sbjct: 421 AD 422

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|125531711|gb|EAY78276.1| hypothetical protein OsI_33323 [Oryza sativa Indica Group]

 Score =  645 bits (1663), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 301/422 (71%), Positives = 360/422 (85%)

Query: 1   MLPSGVKDNQLRESNSQKVHPQPMEEAMNQNPEALEALVSKIFSNISSLKSAYIELQAAH 60
           M+  G K++Q  +SN+QKVHPQP++E MNQN  +++ ++ +IF+NISSLKSAYI+LQ AH
Sbjct: 1   MVLPGSKESQNYDSNNQKVHPQPIDENMNQNMGSMDTMIGRIFNNISSLKSAYIQLQEAH 60

Query: 61  TPYDPDKIQAADKLVISELKNLSELKHFYRENNPKPACISPQDSRLAAEIQEQQSLLKTY 120
           TPYDPDKIQAAD+LVI EL  LSELKH YRE NPKP   +PQD+RL +EIQEQQ+LLKTY
Sbjct: 61  TPYDPDKIQAADQLVIEELTKLSELKHAYREKNPKPVAATPQDARLLSEIQEQQNLLKTY 120

Query: 121 EVMVKKFQSEIQNKDSEIHQLQQHIEDANQKRVKLEKNLKLRGLSTKESEGSGGENGFFP 180
           EVMVKKFQS+IQ +D EI  LQQ I++A  ++ KLEK LK RGL  KESE S  E+ +F 
Sbjct: 121 EVMVKKFQSQIQTRDIEITHLQQQIDEAKLRKSKLEKKLKQRGLLNKESEESDDEDNYFS 180

Query: 181 VDLTPDLFTQAVEAAYKAIHDFSKPLINMMKAAGWDLDSAANSIEPNVVYAKRAHKKYAF 240
           ++LTP LFT AV+ AY++IHDFSKPLINMMKAAGWDLD+AAN+IEP VVY +RAHKKYAF
Sbjct: 181 IELTPSLFTSAVDNAYQSIHDFSKPLINMMKAAGWDLDAAANAIEPAVVYTRRAHKKYAF 240

Query: 241 ESHICQRMFTGFQQEDFSVKSENLIVNKESFFHQFLALREIDPLDVLGQNPDSNFGKFCR 300
           ES+ICQRMF GFQ+E FSVK+ N+ V+ E+FFHQFLA+R +DPLDVL QNPDS FGKFCR
Sbjct: 241 ESYICQRMFGGFQEESFSVKAANITVSNEAFFHQFLAVRAMDPLDVLSQNPDSVFGKFCR 300

Query: 301 SKYLAVLHPKMEASFFGNLDQRNFVMGGGHPRTPFYQAFLKLAKLIWLLHRLAYSFEPNV 360
           SKYL ++HPKME SFFGN+DQRN+VM GGHPRTPFYQAFLKLAK IWLLHRLAYSF+P V
Sbjct: 301 SKYLLLVHPKMEGSFFGNMDQRNYVMSGGHPRTPFYQAFLKLAKSIWLLHRLAYSFDPKV 360

Query: 361 KVFQVNKGSEFSEVYMESVIKNLIIDEDDQKPTVGLMVMPGFWIGGSVIQSRVYLSGVKV 420
           KVFQV KGS+FSE++MESV+KN+I+DE  ++P VGLMVMPGF IG SVIQ+RVYLSGVK 
Sbjct: 361 KVFQVKKGSDFSEIHMESVVKNIILDEGAERPKVGLMVMPGFLIGTSVIQARVYLSGVKS 420

Query: 421 AE 422
           A+
Sbjct: 421 AD 422

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	422
TAIR|locus:2050891	425	AT2G45260 "AT2G45260" [Arabido	0.995	0.988	0.770	1.1e-176
TAIR|locus:2124326	270	AT4G34080 "AT4G34080" [Arabido	0.630	0.985	0.757	1.4e-105
TAIR|locus:2119226	292	AT4G33320 "AT4G33320" [Arabido	0.665	0.962	0.719	4.1e-104
TAIR|locus:2086365	475	AT3G14870 "AT3G14870" [Arabido	0.888	0.789	0.416	1.1e-73
TAIR|locus:2009670	453	AT1G53380 "AT1G53380" [Arabido	0.907	0.845	0.412	1.1e-71
TAIR|locus:2030012	459	UNE1 "AT1G29300" [Arabidopsis	0.869	0.799	0.418	9.9e-71
TAIR|locus:2101891	499	AT3G60680 "AT3G60680" [Arabido	0.860	0.727	0.360	1e-61
TAIR|locus:2154583	559	GIL1 "AT5G58960" [Arabidopsis	0.883	0.667	0.323	4.9e-53
TAIR|locus:2135134	236	AT4G36100 [Arabidopsis thalian	0.464	0.830	0.534	1.4e-46
TAIR|locus:2064432	519	AT2G30380 "AT2G30380" [Arabido	0.556	0.452	0.351	6.6e-27

TAIR|locus:2050891 AT2G45260 "AT2G45260" [Arabidopsis thaliana (taxid:3702)]

 Score = 1716 (609.1 bits), Expect = 1.1e-176, P = 1.1e-176
 Identities = 329/427 (77%), Positives = 376/427 (88%)

Query:     1 MLPSGVKDNQLRESNS-QKVHPQPMEEAMNQNPEALEALVSKIFSNISSLKSAYIELQAA 59
             MLPSG+K+ QLRESN+ QKVHPQPMEE++NQNPEA+EAL+S +F NISSLKSAYIELQ+A
Sbjct:     1 MLPSGLKETQLRESNNNQKVHPQPMEESINQNPEAMEALISNLFGNISSLKSAYIELQSA 60

Query:    60 HTPYDPDKIQAADKLVISELKNLSELKHFYRENNPKPACISPQDSRLAAEIQEQQSLLKT 119
             HTPYDP+KIQAADK+VISELKNLSE+KHFYRENNPKP C+SPQDSRLAAEIQEQQSLLKT
Sbjct:    61 HTPYDPEKIQAADKVVISELKNLSEMKHFYRENNPKPVCVSPQDSRLAAEIQEQQSLLKT 120

Query:   120 YEVMVKKFQSEIQNKDSEIHQLQQHIEDANQKRVKLEKNLKLRGLSTKXXXXXXXXNGFF 179
             YEVMVKKFQSEIQNKDSEI Q+ Q IE+ANQKR+KLEKNLKLRG+ST         N  F
Sbjct:   121 YEVMVKKFQSEIQNKDSEITQMLQKIEEANQKRLKLEKNLKLRGMSTNEGSNGDG-NMQF 179

Query:   180 PVDLTPDLFTQAVEAAYKAIHDFSKPLINMMKAAGWDLDSAANSIEPNVVYAKRAHKKYA 239
             P DLT +L+    EAA KA+HDFSKPLINMMKAAGWDLDSAANSIEP+VVYAKR HKKYA
Sbjct:   180 P-DLTTELYVSTYEAAAKAVHDFSKPLINMMKAAGWDLDSAANSIEPDVVYAKRPHKKYA 238

Query:   240 FESHICQRMFTGFQQEDFSVKSENLIV----NKESFFHQFLALREIDPLDVLGQNPDSNF 295
             FES+ICQRMF+GFQQ++FSV SE+  V    + ++FF QFLAL+++DPLD LG NPDSNF
Sbjct:   239 FESYICQRMFSGFQQKNFSVNSESAAVMANDDTDTFFRQFLALKDMDPLDALGTNPDSNF 298

Query:   296 GKFCRSKYLAVLHPKMEASFFGNLDQRNFVMGGGHPRTPFYQAFLKLAKLIWLLHRLAYS 355
             G FCRSKYL ++HPKMEASFFGNLDQR++V GGGHPRT FYQAFLKLAK IW+LHRLAYS
Sbjct:   299 GIFCRSKYLLLVHPKMEASFFGNLDQRDYVTGGGHPRTAFYQAFLKLAKSIWILHRLAYS 358

Query:   356 FEPNVKVFQVNKGSEFSEVYMESVIKNLIIDEDDQKPTVGLMVMPGFWIGGSVIQSRVYL 415
             F+P  K+FQV KGSEFS+ YMESV+KN+++DE ++ P VGLMVMPGFWIGGSVIQSRVY+
Sbjct:   359 FDPAAKIFQVKKGSEFSDSYMESVVKNIVVDEKEENPRVGLMVMPGFWIGGSVIQSRVYV 418

Query:   416 SGVKVAE 422
             SGVKV E
Sbjct:   419 SGVKVLE 425

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005774 "vacuolar membrane" evidence=IDA

TAIR|locus:2124326 AT4G34080 "AT4G34080" [Arabidopsis thaliana (taxid:3702)]

 Score = 1045 (372.9 bits), Expect = 1.4e-105, P = 1.4e-105
 Identities = 206/272 (75%), Positives = 234/272 (86%)

Query:    35 LEALVSKIFSNISSLKSAYIELQAAHTPYDPDKIQAADKLVISELKNLSELKHFYRENNP 94
             +EAL+S +F NISSLKSAYIELQ+AHTPYDP+KIQAADK+VISELKNLSE+KHFYRENNP
Sbjct:     1 MEALISNLFGNISSLKSAYIELQSAHTPYDPEKIQAADKVVISELKNLSEMKHFYRENNP 60

Query:    95 KPACISPQDSRLAAEIQEQQSLLKTYEVMVKKFQSEIQNKDSEIHQLQQHIEDANQKRVK 154
             KP C+SPQDSRLAAEIQEQQSLLKTYEVMVKKFQSEIQNKDSEI Q+ Q IE+ANQKR+K
Sbjct:    61 KPVCVSPQDSRLAAEIQEQQSLLKTYEVMVKKFQSEIQNKDSEITQMLQKIEEANQKRLK 120

Query:   155 LEKNLKLRGLSTKXXXXXXXXNGFFPVDLTPDLFTQAVEAAYKAIHDFSKPLINMMKAAG 214
             LEKNLKLRG+ST         N  FP DLT +LF    EAA K +HDFSKPLINMMKAAG
Sbjct:   121 LEKNLKLRGMSTNQGSGGDG-NLQFP-DLTTELFVSTYEAAAKVVHDFSKPLINMMKAAG 178

Query:   215 WDLDSAANSIEPNVVYAKRAHKKYAFESHICQRMFTGFQQEDFSVKSENLIV----NKES 270
             WDLD+AANSIEP+VVYAKR HK+YAFES+ICQRMF+GFQQ++FSV SE+  V    + ++
Sbjct:   179 WDLDTAANSIEPDVVYAKRPHKEYAFESYICQRMFSGFQQKNFSVNSESATVMADDDTDT 238

Query:   271 FFHQFLALREIDPLDVLGQNPDSNFGKFCRSK 302
             FF QFLAL+++DPLD LG NPDSNFG FCRSK
Sbjct:   239 FFRQFLALKDMDPLDALGTNPDSNFGIFCRSK 270

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2119226 AT4G33320 "AT4G33320" [Arabidopsis thaliana (taxid:3702)]

 Score = 1031 (368.0 bits), Expect = 4.1e-104, P = 4.1e-104
 Identities = 208/289 (71%), Positives = 241/289 (83%)

Query:    24 MEEAMNQNPEALEALVSKIFSNISSLKSAYIELQAAHTPYDPDKIQAADKLVISELKNLS 83
             MEE++NQN EA+EAL+S +F NISSLKSAYIELQ+AHTPYDP+KIQAADK+V SELKNLS
Sbjct:     1 MEESINQNHEAMEALISNLFGNISSLKSAYIELQSAHTPYDPEKIQAADKVVNSELKNLS 60

Query:    84 ELKHFYRENNPKPACISPQDSRLAAEIQEQQSLLKTY-EVMVKKFQSEIQNKDSEIHQLQ 142
             E+KH YRENNPKP C+SPQDSRLAAEIQEQQSLLKTY EVMVKKFQSEIQNKDSEI Q+ 
Sbjct:    61 EMKHSYRENNPKPVCVSPQDSRLAAEIQEQQSLLKTYYEVMVKKFQSEIQNKDSEITQML 120

Query:   143 QHIEDANQKRVKLEKNLKLRGLSTKXXXXXXXXNGFFPVDLTPDLFTQAVEAAYKAIHDF 202
             Q IE+AN+KR+KLEKNLKLRG+ST         N  FP DLT +LF    E A KA+HDF
Sbjct:   121 QKIEEANKKRLKLEKNLKLRGMSTNEGSGGDG-NLQFP-DLTTELFVSTYEVAAKAVHDF 178

Query:   203 SKPLINMMKAAGWDLDSAANSIEPNVVYAKRAHKKYAFESHICQRMFTGFQQEDFSVKSE 262
             SKPLINMMKAAGWDLDSAANSIEP+VVYAKR HKKYAFES+ICQRMF+GFQQ++FSV SE
Sbjct:   179 SKPLINMMKAAGWDLDSAANSIEPDVVYAKRPHKKYAFESYICQRMFSGFQQKNFSVNSE 238

Query:   263 NLIV----NKESFFHQFLALREIDPLDVLGQNPDSNFGKF-CRSKYLAV 306
             +  V    + ++FF QFLAL+++DPLD LG NPDSN   + C+  ++ V
Sbjct:   239 SATVMADDDTDTFFRQFLALKDMDPLDALGTNPDSNVRLYACQKVFVIV 287

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2086365 AT3G14870 "AT3G14870" [Arabidopsis thaliana (taxid:3702)]

 Score = 744 (267.0 bits), Expect = 1.1e-73, P = 1.1e-73
 Identities = 163/391 (41%), Positives = 232/391 (59%)

Query:    34 ALEALVSKIFSNISSLKSAYIELQAAHTPYDPDKIQAADKLVISELKNLSELKHFYRENN 93
             A+EAL++K+F+ ISS+KS Y +LQ A +PYDP+ IQ AD LV++ELK LSELK  + +  
Sbjct:    84 AMEALLAKLFATISSIKSGYAQLQYAQSPYDPNGIQKADNLVVAELKTLSELKQSFLKKQ 143

Query:    94 PKPACISPQDSRLAAEIQEQQSLLKTYEVMVKKFQSEIQNKDSEIHQLQQHIEDANQKRV 153
               P   +P  + + AEIQE +S+LKTYE+M KK + +++ KDSEI  L++  +++  +  
Sbjct:   144 LDP---NPDRTLVLAEIQELRSVLKTYEIMGKKLECQLKLKDSEIIFLKEKFQESMTQNK 200

Query:   154 KLEKNLKLRGLSTKXXXXXXXXNGFFPVDLTPDLFTQAVEAAYKAIHDFSKPLINMMKAA 213
              +EK L   G            +    V  T   F   +    K+I  F K ++  MK A
Sbjct:   201 LMEKRLNQSGQLCNPLDHNLHLSA---VSSTH--FVTYLHHTVKSIRGFVKLMVEQMKLA 255

Query:   214 GWDLDSAANSIEPNVVYAKRAHKKYAFESHICQRMFTGFQQEDFSVKSENLIV--NKESF 271
              WD+D AA  I+P+V+Y K+ HK +A E ++C+ M   FQ   FS +S       +K  F
Sbjct:   256 AWDIDMAAELIQPDVLYYKQDHKCFALEHYVCKIMLEAFQLPYFSNESSKKTSREDKAMF 315

Query:   272 FHQFLALREIDPLDVLGQNPDSNFGKFCRSKYLAVLHPKMEASFFGNLDQRNFVMGGGHP 331
             F +F  LR + P + L   P S   KFCR+KYL ++HPKME +FFG+L QRN V  G  P
Sbjct:   316 FERFTELRSMKPREYLASRPKSRLAKFCRTKYLQLIHPKMEQAFFGHLHQRNQVTAGEFP 375

Query:   332 RTPFYQAFLKLAKLIWLLHRLAYSFEPNVKVFQVNKGSEFSEVYMESVIKNLIIDEDDQK 391
              T    AFL++AK +WLLH LA+SF+P   +FQV++G  FSEVYM+SV +      + ++
Sbjct:   376 ETSLCTAFLEMAKRVWLLHCLAFSFDPEASIFQVSRGCRFSEVYMKSVSEEAFFSPEQEE 435

Query:   392 ------PTVGLMVMPGFWIGGSVIQSRVYLS 416
                   P V   V+PGF IG + IQ  VYLS
Sbjct:   436 SSSETEPGVAFTVVPGFRIGKTTIQCEVYLS 466

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2009670 AT1G53380 "AT1G53380" [Arabidopsis thaliana (taxid:3702)]

 Score = 725 (260.3 bits), Expect = 1.1e-71, P = 1.1e-71
 Identities = 167/405 (41%), Positives = 230/405 (56%)

Query:    24 MEEAMNQNPEALEALVSKIFSNISSLKSAYIELQAAHTPYDPDKIQAADKLVISELKNLS 83
             +EE   ++ + LEAL++K+F+ +SS+K+AY +LQ + +PYD   IQ AD LV++ELK LS
Sbjct:    57 LEEEYERS-QGLEALLAKLFATVSSIKAAYAQLQHSQSPYDSIGIQKADNLVVAELKTLS 115

Query:    84 ELKHFYRENNPKPACISPQDSRLAAEIQEQQSLLKTYEVMVKKFQSEIQNKDSEIHQLQQ 143
             ELK  + +    P   +P+ + + AEIQE +SLLKTYE+M KK +S+ + KDSEI  L++
Sbjct:   116 ELKQCFMKKQVDP---NPERTLVLAEIQELRSLLKTYEIMGKKLESQYKLKDSEIIFLRE 172

Query:   144 HIEDANQKRVKLEKNLKLRGLSTKXXXXXXXXNGFFPVDLTPDLFTQAVEAAYKAIHDFS 203
              ++++ ++    EK L   G                   L P  F   +    K+   F 
Sbjct:   173 KLDESMKQNKLTEKRLNQSGQLCNPLDNLHLSA------LNPTHFVTYLHHTVKSTRGFV 226

Query:   204 KPLINMMKAAGWDLDSAANSIEPNVVYAKRAHKKYAFESHICQRMFTGFQQEDFSVKSEN 263
             K +I  MK AGWD+ SAANSI P V Y K+ HK + FE  +   MF  F    FS  SE+
Sbjct:   227 KLMIEQMKLAGWDISSAANSIHPGVFYYKQDHKCFTFEHFVSNVMFEAFHLPYFSTSSES 286

Query:   264 LIVNK--------ESFFHQFLALREIDPLDVLGQNPDSNFGKFCRSKYLAVLHPKMEASF 315
                 K        E FF +F  LR +   D L   P S F +FCR+KYL ++HPKME +F
Sbjct:   287 RSYKKKKQSNADREMFFERFKELRSMKAKDYLTARPKSRFARFCRAKYLQLIHPKMEQAF 346

Query:   316 FGNLDQRNFVMGGGHPRTPFYQAFLKLAKLIWLLHRLAYSFEPNVKVFQVNKGSEFSEVY 375
             FG+L  RN V  G  P T  +  FL++AK IWLLH LA SFE   ++F+V KG  FSEVY
Sbjct:   347 FGHLHLRNQVSAGEFPETSLFSGFLEMAKRIWLLHCLALSFEREAEIFRVPKGCRFSEVY 406

Query:   376 MESVIKNLII----DEDDQKPTVGLMVMPGFWIGGSVIQSRVYLS 416
             M+SV +           + +P V   V+PGF IG + IQ  VYLS
Sbjct:   407 MKSVAEEAFFPAAESSPESEPRVAFTVVPGFRIGKTSIQCEVYLS 451

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0006857 "oligopeptide transport" evidence=RCA

TAIR|locus:2030012 UNE1 "AT1G29300" [Arabidopsis thaliana (taxid:3702)]

 Score = 716 (257.1 bits), Expect = 9.9e-71, P = 9.9e-71
 Identities = 166/397 (41%), Positives = 234/397 (58%)

Query:    30 QNPEALEALVSKIFSNISSLKSAYIELQAAHTPYDPDKIQAADKLVISELKNLSELKHFY 89
             +N   L+A+V+KIF++ +S+K+AY ELQ A  PYD D IQAAD  V+ EL+ LSELK  +
Sbjct:    80 RNRAVLQAVVAKIFASTTSIKAAYAELQMAQRPYDNDAIQAADTAVVEELRALSELKRSF 139

Query:    90 RENNPKPACISPQDSRLAAEIQEQQSLLKTYEVMVKKFQSEIQNKDSEIHQLQQHIEDAN 149
                  K   +SPQ + + AEIQEQQSL++TYE+ +KK + E+  K  +I +L+   E++ 
Sbjct:   140 LR---KELNLSPQVAIMLAEIQEQQSLMRTYEITIKKLEFEVTEKQLKIDELKMSFEESL 196

Query:   150 QKRVKLEKNLKLRGLSTKXXXXXXXXNGFFPVDLTPDLFTQAVEAAYKAIHDFSKPLINM 209
                  LEK L   G S          N      L    F Q +    +++  F K ++  
Sbjct:   197 VVNKSLEKKLSASG-SVSVFDNIEIRN------LNLSSFVQVLGFTLRSVRSFVKLIVKE 249

Query:   210 MKAAGWDLDSAANS-IEPNV-----VYAKRAHKKYAFESHICQRMFTGFQQEDFSVKSEN 263
             M++A WDLD+AA++ +  NV     V+A+ +H+ +AFES +C +MF  F   DFS + E 
Sbjct:   250 MESASWDLDAAASAAVSVNVKNASTVFARPSHRCFAFESFVCGKMFENFGAPDFSRREE- 308

Query:   264 LIVNKESFFHQFLALREIDPLDVLGQNPDSNFGKFCRSKYLAVLHPKMEASFFGNLDQRN 323
                        F  LR +DP+  L +NP S+F +F   KYL+V+H KME SFFGNL+QR 
Sbjct:   309 -----------FEKLRSVDPIQYLTRNPGSSFARFVVHKYLSVVHAKMECSFFGNLNQRK 357

Query:   324 FVMGGGHPRTPFYQAFLKLAKLIWLLHRLAYSFEPNVKVFQVNKGSEFSEVYMESVIKN- 382
              V  GG P + F+  F ++AK IWLLH LA+S   NV VFQ+ +G  FS+VYMESV    
Sbjct:   358 LVNSGGFPDSGFFATFCEMAKRIWLLHCLAFSLSGNVTVFQLKRGCRFSQVYMESVKSGD 417

Query:   383 -LIIDEDDQKPTVGLMVMPGFWIGGSVIQSRVYLSGV 418
               +   D+    VG  V+PGF IG +VIQS+VYL+ V
Sbjct:   418 ESLFSGDNSDIRVGFTVVPGFKIGENVIQSQVYLTPV 454

GO:0009567 "double fertilization forming a zygote and endosperm" evidence=IMP

TAIR|locus:2101891 AT3G60680 "AT3G60680" [Arabidopsis thaliana (taxid:3702)]

 Score = 631 (227.2 bits), Expect = 1.0e-61, P = 1.0e-61
 Identities = 142/394 (36%), Positives = 222/394 (56%)

Query:    37 ALVSKIFSNISSLKSAYIELQAAHTPYDPDKIQAADKLVISELKNLSELKHFYRENNPKP 96
             +L+S +F+  SS +++Y++LQAAH P+  + ++AAD+ ++S L+ LS+LK FYR  N + 
Sbjct:   120 SLISSVFATASSFEASYLQLQAAHAPFVEENVKAADRALVSNLQKLSDLKQFYR--NYRQ 177

Query:    97 ACISPQD----SRLAAEIQEQQSLLKTYEVMVKKFQSEIQNKDSEIHQLQQHIEDANQKR 152
             +     D    S L + +QE QS L+  E +  + Q+E+  KD ++  L+  + +  +  
Sbjct:   178 SLDFESDLAIGSCLESRVQENQSKLRALETVSNRLQAEMDAKDLQVWSLRNKLGEIQKST 237

Query:   153 VKLEKNLKLRGLSTKXXXXXXXXNGFFPVDLTPDLFTQAVEAAYKAIHDFSKPLINMMKA 212
              KL K L                N    V L+  +F   +  A+KA   F+K LI +M+ 
Sbjct:   238 SKLSKRLS--------------SNSSLDVLLSVRVFESLLYDAFKATQKFTKILIELMEK 283

Query:   213 AGWDLDSAANSIEPNVVYAKRAHKKYAFESHICQRMFTGFQQEDFSVKSENLIVNKESFF 272
             AGWDLD  A S+ P V YAK  H +YA  S++C  MF GF  E F +   +   ++ S  
Sbjct:   284 AGWDLDLVAKSVHPEVDYAKERHNRYALLSYVCLGMFRGFDGEGFDLNENDYEESERSSV 343

Query:   273 HQFLALREI------DPLDVLGQNPDSNFGKFCRSKYLAVLHPKMEASFFGNLDQRNFVM 326
                 +LRE+      +P+++L ++ D  F +FC  KY  ++HP M +S F N+D+   V+
Sbjct:   344 DS--SLRELMQHVSSNPMELLDRDKDCAFSRFCDKKYHELIHPNMASSIFSNMDENEAVL 401

Query:   327 GGGHPRTPFYQAFLKLAKLIWLLHRLAYSFEPNVKVFQVNKGSEFSEVYMESVIKNLIID 386
                   + FY++F+ +A  IW LH+LA SF+P V++FQV  G EFS V+ME+V+K     
Sbjct:   402 SSWRSLSTFYESFVTMASSIWTLHKLALSFDPAVEIFQVESGVEFSIVFMENVLKRKQDK 461

Query:   387 EDDQKPT---VGLMVMPGFWIGGSVIQSRVYLSG 417
             +    PT   VG  V+PGF IG +VIQ +VYL+G
Sbjct:   462 KFSMSPTRAKVGFTVVPGFKIGCTVIQCQVYLTG 495

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005777 "peroxisome" evidence=IDA

GO:0005856 "cytoskeleton" evidence=IDA

TAIR|locus:2154583 GIL1 "AT5G58960" [Arabidopsis thaliana (taxid:3702)]

 Score = 549 (198.3 bits), Expect = 4.9e-53, P = 4.9e-53
 Identities = 132/408 (32%), Positives = 223/408 (54%)

Query:    33 EALEALVSKIFSNISSLKSAYIELQAAHTPYDPDKIQAADKLVISELKNLSELKHFYREN 92
             + +E ++ ++F+  +++K AY+ LQ AH+P+DP+K+  AD  +++EL+ +  L+  +R  
Sbjct:   158 QEMEMVMDEVFTAAAAMKRAYVALQEAHSPWDPEKMHDADMAMVAELRRIGSLRERFRRM 217

Query:    93 NPKPACISPQDSRLAAEIQEQQSLLKTYEVMVKKFQSEIQNKDSEIHQLQQHIEDA---N 149
                 +    ++      ++E    +  YE +VK+ + E++ KD+EI  L++ ++ A   N
Sbjct:   218 RGTGSGGRRKNDAGRGMLREA---VAPYEAVVKELKKEVKVKDTEIENLKEKVKVASMAN 274

Query:   150 QKRVKLEKNLKLRGLSTKXXXXXXXXNGFFPVDL-----TPDLFTQAVEAAYKAIHDFSK 204
                 K  + L  R ++             F + +         FT  + +  +A H    
Sbjct:   275 GNGGKKHRLLSSRKVNCTTQIAVSPVPELFEMTMIQVKEASKSFTGILLSLMRAAHWDIA 334

Query:   205 PLINMMKAA-----GWDLDSAANSIEPNVVYAKRAHKKYAFESHICQRMFTGFQQEDFSV 259
               +  ++AA     G    S A+S++ +V      H K+A ES+IC+++F GF  E F +
Sbjct:   335 AAVRSIEAASASSDGMSASSFASSVQSSV---PNQHAKFALESYICRKIFQGFDHETFYM 391

Query:   260 K-SENLIVNKESF----FHQFLALREIDPLDVLGQNPDSNFGKFCRSKYLAVLHPKMEAS 314
               S + ++N + +    F QF  ++ +DP+++LG  P  +FGKFC  KYL+++H KME S
Sbjct:   392 DGSLSSLINPDQYRRDCFAQFKDMKAMDPMELLGILPTCHFGKFCSKKYLSIIHQKMEES 451

Query:   315 FFGNLDQRNFVMGGGHPRTPFYQAFLKLAKLIWLLHRLAYSFEPNVKVFQVNKGSEFSEV 374
              FG+ +QR  V+ G HPR+ FY  FL LAK +WLLH LA+S +P+   F+ N+G+EF   
Sbjct:   452 LFGDSEQRELVVAGNHPRSQFYGEFLGLAKAVWLLHLLAFSLDPSPSHFEANRGAEFHSQ 511

Query:   375 YMESVIKNLIIDEDDQKPT---VGLMVMPGFWIG----GSVIQSRVYL 415
             YMESV++      D + P    VG  V PGF +     GS+I+SRVYL
Sbjct:   512 YMESVVRF----SDGRVPAGQVVGFPVCPGFKLSHQGKGSIIKSRVYL 555

GO:0003674 "molecular_function" evidence=ND

GO:0009639 "response to red or far red light" evidence=IMP

GO:0009959 "negative gravitropism" evidence=IMP

GO:0007020 "microtubule nucleation" evidence=RCA

GO:0010075 "regulation of meristem growth" evidence=RCA

GO:0048653 "anther development" evidence=RCA

TAIR|locus:2135134 AT4G36100 [Arabidopsis thaliana (taxid:3702)]

 Score = 488 (176.8 bits), Expect = 1.4e-46, P = 1.4e-46
 Identities = 108/202 (53%), Positives = 134/202 (66%)

Query:    24 MEEAMNQNPEALEALVSKIFSNISSLKSAYIELQAAHTPYDPDKIQAADKLVISELKNLS 83
             MEE++NQNPEA+EAL+S +F NISSLKSAYIELQ+AHTPYDP+KIQAADK+VISELKNLS
Sbjct:     1 MEESINQNPEAMEALISNLFGNISSLKSAYIELQSAHTPYDPEKIQAADKVVISELKNLS 60

Query:    84 ELKHFYRENNPKPACISPQDSRLAAEIQEQQSLLKTYEVMVKK--FQSEIQNKDSEIHQL 141
             E+KHFYRENNPKP C+SPQDSRLAAEIQEQQSLLKTYEVMVK+   +  +   D +  ++
Sbjct:    61 EMKHFYRENNPKPVCVSPQDSRLAAEIQEQQSLLKTYEVMVKRSLMEQSLDAYDEKEKEM 120

Query:   142 QQHIEDANQKRVKLEKNLKLRGLSTKXXXXXXXXNGFFPVDLTPDLFTQAVEAAYKAIHD 201
                I   N  R +L   LK +G  T              ++       +AVEAA +    
Sbjct:   121 MMMIGSIN--RTELLSVLKAKG--TNIDKLRFAIMYLISLESVNQTEVEAVEAALREAKI 176

Query:   202 FSKPLINMMKAAGWDLDSAANS 223
              +     + K    ++  AANS
Sbjct:   177 DTSTFQYVKKIKSLNVSLAANS 198

GO:0005634 "nucleus" evidence=ISM

GO:0006904 "vesicle docking involved in exocytosis" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0005777 "peroxisome" evidence=IDA

TAIR|locus:2064432 AT2G30380 "AT2G30380" [Arabidopsis thaliana (taxid:3702)]

 Score = 307 (113.1 bits), Expect = 6.6e-27, P = 6.6e-27
 Identities = 92/262 (35%), Positives = 138/262 (52%)

Query:    75 VISELKNLSELKHFYRENNP-KPACISPQDSRLAAEIQEQQSL----LKTYEVMVKKFQS 129
             ++S LK L+ L+ F + + P  P  I   D+ + ++++  + +    LKT ++  KK + 
Sbjct:    82 IVSSLK-LAYLE-FQQAHLPYDPDKIIEADNLVVSQLEALRRIKRLYLKTIQLNAKKTEI 139

Query:   130 EIQNKDS---EIHQLQQHIEDANQKRVKLEKNLKLRGLSTKXXXXXXXXNGFFPVDLTPD 186
                  D    EI   ++H+E   + +V+ +++ ++  L  K               ++  
Sbjct:   140 AASCLDRLRYEIEVNEKHLEKL-KAQVRAKES-EIHSLIKKQECLVAENRKLENRIVSVS 197

Query:   187 LFTQAVEAAYKAIHDFSKPLINMMKAAGWDLDSAANSIEPNVVYAKRAHKKYAFESHICQ 246
              F  A  AA K++HDF+KPLI +MKA  W+L+ A  SI  NV +AK + KKYAFES+I +
Sbjct:   198 SFEFAFRAASKSVHDFAKPLITLMKATDWNLEKAVESIVGNVTFAKTSDKKYAFESYIVR 257

Query:   247 RMFTGFQQEDFSVKSENLIVNKESFFHQFLALREIDPLDVLGQNPDSNFGKFCRSKYLAV 306
             RMF G +     V +E +     SF          DPLD L    DS F +FC  KYL V
Sbjct:   258 RMFHGIKLNPCDV-TELM-----SFD---------DPLDALTAFSDSAFSRFCGQKYLLV 302

Query:   307 LHPKMEASFFGNLDQRNFVMGG 328
             +HP MEASFFGNLD R  V+ G
Sbjct:   303 VHPSMEASFFGNLDMRGLVLLG 324

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	422
pfam04859	132	pfam04859, DUF641, Plant protein of unknown functi	6e-61

>gnl|CDD|191114 pfam04859, DUF641, Plant protein of unknown function (DUF641)

 Score =  193 bits (492), Expect = 6e-61
 Identities = 79/135 (58%), Positives = 105/135 (77%), Gaps = 3/135 (2%)

Query: 25  EEAMNQNPEALEALVSKIFSNISSLKSAYIELQAAHTPYDPDKIQAADKLVISELKNLSE 84
           EE+ NQN +A+EAL++K+F+N+SSLK+AY +LQ AH+PYDP+KIQAAD  V++ELK LSE
Sbjct: 1   EESDNQNAQAMEALIAKLFANVSSLKAAYAQLQQAHSPYDPEKIQAADAAVVAELKKLSE 60

Query: 85  LKHFYRENNPKPACISPQDSRLAAEIQEQQSLLKTYEVMVKKFQSEIQNKDSEIHQLQQH 144
           LK  YR    K    +PQD+ LAAEIQEQ+SLLKTYE+MVKK ++E++ KDSEI  L++ 
Sbjct: 61  LKRRYRRKRQKG---APQDAILAAEIQEQRSLLKTYEIMVKKLEAEVRAKDSEIDSLREK 117

Query: 145 IEDANQKRVKLEKNL 159
           +E+      KLEK L
Sbjct: 118 LEELLVANSKLEKRL 132

Plant protein of unknown function. Length = 132

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	422
PF04859	131	DUF641: Plant protein of unknown function (DUF641)	100.0
PF01025	165	GrpE: GrpE; InterPro: IPR000740 Molecular chaperon	90.18
PF08614	194	ATG16: Autophagy protein 16 (ATG16); InterPro: IPR	88.3
PF12329	74	TMF_DNA_bd: TATA element modulatory factor 1 DNA b	87.78
PF08317	325	Spc7: Spc7 kinetochore protein; InterPro: IPR01325	86.56
PF10205	102	KLRAQ: Predicted coiled-coil domain-containing pro	86.03
COG0497	557	RecN ATPase involved in DNA repair [DNA replicatio	85.07
COG0576	193	GrpE Molecular chaperone GrpE (heat shock protein)	83.36
PRK09039	343	hypothetical protein; Validated	82.37
PRK10869	553	recombination and repair protein; Provisional	81.44
PF15290	305	Syntaphilin: Golgi-localised syntaxin-1-binding cl	81.37

>PF04859 DUF641: Plant protein of unknown function (DUF641); InterPro: IPR006943 This conserved region is found in a number of plant proteins of unknown function

Probab=100.00  E-value=1.4e-46  Score=332.52  Aligned_cols=130  Identities=55%  Similarity=0.858  Sum_probs=125.6

Q ss_pred             hhccChHHHHHHHHHHHHHHhhhHHHHHHHHhhcCCCChhhHHHhHHHHHHHhhhhHHHHHHHhhCCCCCCCCCCcchhH
Q 014589           27 AMNQNPEALEALVSKIFSNISSLKSAYIELQAAHTPYDPDKIQAADKLVISELKNLSELKHFYRENNPKPACISPQDSRL  106 (422)
Q Consensus        27 ~~~~~~~~~eali~~lFa~vSslK~AY~qLQ~Ah~Pydpd~I~aAD~~vVseL~~ls~LK~~y~~~~~~~~~~~p~~~~l  106 (422)
                      .+.++.++++++|++|||+||+||+||+|||+||+|||||+|++||++||+||++||+||++|++++++++   |+.+++
T Consensus         2 ~~~~~~~~~eali~~lFa~VSalKaAY~qLQ~Ah~PyDpd~I~aAD~~vVsEL~~Ls~LK~~y~~~~~~~~---~~~~~l   78 (131)
T PF04859_consen    2 EEAQRAAAMEALIAKLFATVSALKAAYAQLQQAHSPYDPDKIQAADEAVVSELRRLSELKRRYRKKQSDPS---PQVARL   78 (131)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCC---cccccc
Confidence            45678999999999999999999999999999999999999999999999999999999999999988655   999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhhhh
Q 014589          107 AAEIQEQQSLLKTYEVMVKKFQSEIQNKDSEIHQLQQHIEDANQKRVKLEKNL  159 (422)
Q Consensus       107 ~aei~E~q~ll~~ye~~~~kL~~e~~~kDsEi~~Lr~~L~e~~~~n~~Lek~l  159 (422)
                      .++++|+|++++|||+++++||+|++.||+||.+||++|+++.+.|++|||||
T Consensus        79 ~a~~~e~qsli~~yE~~~~kLe~e~~~Kdsei~~Lr~~L~~~~~~n~~Lekrl  131 (131)
T PF04859_consen   79 AAEIQEQQSLIKTYEIVVKKLEAELRAKDSEIDRLREKLDELNRANKSLEKRL  131 (131)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence            99999999999999999999999999999999999999999999999999996

>PF01025 GrpE: GrpE; InterPro: IPR000740 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress

Probab=90.18  E-value=0.38  Score=43.58  Aligned_cols=55  Identities=25%  Similarity=0.374  Sum_probs=36.7

Q ss_pred             CcceeEEecCCCccccccccccccccccCCCCCCCeeEEEeeCCeeecCeEEE-EEEEe
Q 014589          358 PNVKVFQVNKGSEFSEVYMESVIKNLIIDEDDQKPTVGLMVMPGFWIGGSVIQ-SRVYL  415 (422)
Q Consensus       358 p~~~if~v~rg~~F~~~YMEsV~~~~~~~~~~~~~~V~ftV~PGF~vg~~vik-c~VyL  415 (422)
                      -.+..+.+. |..|||.+||-|..... + +..+..|.=.+.|||+++++||+ ++|-+
T Consensus       108 ~Gv~~i~~~-G~~FDp~~heav~~~~~-~-~~~~~~I~~v~~~GY~~~~rvlRpA~V~V  163 (165)
T PF01025_consen  108 NGVEEIEPV-GEPFDPNLHEAVETVPD-P-DKEPGTIVEVVRPGYRLGGRVLRPAEVVV  163 (165)
T ss_dssp             TTEEEE--T-SSB--TTTEEEEEEECS-S-SS-CTBEEEECC-EEEETTEEEE-EEEEE
T ss_pred             CCCEecCCC-CCCCCHHHheeheecCc-C-CCCcCeEEEEEecCEEECCEEeeeeEEEe
Confidence            356677777 99999999999876432 2 23567788899999999999886 44543

The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolysing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. In prokaryotes the grpE protein. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. The X-ray crystal structure of GrpE in complex with the ATPase domain of DnaK revealed that GrpE is an asymmetric homodimer, bent in a manner that favours extensive contacts with only one DnaKATPase monomer []. GrpE does not actively compete for the atomic positions occupied by the nucleotide. GrpE and ADP mutually reduce one another's affinity for DnaK 200-fold, and ATP instantly dissociates GrpE from DnaK.; GO: 0000774 adenyl-nucleotide exchange factor activity, 0042803 protein homodimerization activity, 0051087 chaperone binding, 0006457 protein folding; PDB: 3A6M_A 4ANI_A 1DKG_B.

>PF08614 ATG16: Autophagy protein 16 (ATG16); InterPro: IPR013923 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells

Probab=88.30  E-value=1.2  Score=42.10  Aligned_cols=122  Identities=18%  Similarity=0.223  Sum_probs=28.5

Q ss_pred             HHHHHHHhhhHHHHHHHHhh-------c-------CCCChhhHHHhHHHHHHHhhhhHHHHHHHhhCCCCCCCCCCcchh
Q 014589           40 SKIFSNISSLKSAYIELQAA-------H-------TPYDPDKIQAADKLVISELKNLSELKHFYRENNPKPACISPQDSR  105 (422)
Q Consensus        40 ~~lFa~vSslK~AY~qLQ~A-------h-------~Pydpd~I~aAD~~vVseL~~ls~LK~~y~~~~~~~~~~~p~~~~  105 (422)
                      .+|++.++.++..=..||..       |       .|-.+..|..-+..++.--..|+++++.--...-.-...+-....
T Consensus        27 ~~L~d~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~l~~ELael~r~~~el~~~L~~~~~~l~~  106 (194)
T PF08614_consen   27 NRLADRTSLLKAENEQLQPEAESLPSSSSSSPSESGSVSSAQISSLEQKLAKLQEELAELYRSKGELAQQLVELNDELQE  106 (194)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccch
Confidence            78889999999988888862       1       122333344444444433344555444222221100011222333


Q ss_pred             HHHHHHHHHHHHHHHHHHHH-------HHHHHHhccchHHHHHHHHHHHHHHHHHhhhhhhhh
Q 014589          106 LAAEIQEQQSLLKTYEVMVK-------KFQSEIQNKDSEIHQLQQHIEDANQKRVKLEKNLKL  161 (422)
Q Consensus       106 l~aei~E~q~ll~~ye~~~~-------kL~~e~~~kDsEi~~Lr~~L~e~~~~n~~Lek~l~~  161 (422)
                      +.+++.+.+..++.++..+.       .|+.+++.|+.-+..|+.++..++-.+..+|+++..
T Consensus       107 l~~~~~~~~~~l~~l~~~~~~L~~~~~~l~~~l~ek~k~~e~l~DE~~~L~l~~~~~e~k~~~  169 (194)
T PF08614_consen  107 LEKELSEKERRLAELEAELAQLEEKIKDLEEELKEKNKANEILQDELQALQLQLNMLEEKLRK  169 (194)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            55555555555555555444       444444555555566666666666666667766653

In yeast, 15 Apg proteins coordinate the formation of autophagosomes. No molecule involved in autophagy has yet been identified in higher eukaryotes []. The pre-autophagosomal structure contains at least five Apg proteins: Apg1p, Apg2p, Apg5p, Aut7p/Apg8p and Apg16p. It is found in the vacuole []. The C-terminal glycine of Apg12p is conjugated to a lysine residue of Apg5p via an isopeptide bond. During autophagy, cytoplasmic components are enclosed in autophagosomes and delivered to lysosomes/vacuoles. Auotphagy protein 16 (Apg16) has been shown to be bind to Apg5 and is required for the function of the Apg12p-Apg5p conjugate []. Autophagy protein 5 (Apg5) is directly required for the import of aminopeptidase I via the cytoplasm-to-vacuole targeting pathway []. This entry represents auotphagy protein 16 (Apg16), which is required for the function of the Apg12p-Apg5p conjugate.; PDB: 3A7O_D 3A7P_B.

>PF12329 TMF_DNA_bd: TATA element modulatory factor 1 DNA binding; InterPro: IPR022092 This is the middle region of a family of TATA element modulatory factor 1 proteins conserved in eukaryotes that contains at its N-terminal section a number of leucine zippers that could potentially form coiled coil structures

Probab=87.78  E-value=2.5  Score=34.45  Aligned_cols=59  Identities=20%  Similarity=0.304  Sum_probs=48.3

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhhhhhh
Q 014589          103 DSRLAAEIQEQQSLLKTYEVMVKKFQSEIQNKDSEIHQLQQHIEDANQKRVKLEKNLKL  161 (422)
Q Consensus       103 ~~~l~aei~E~q~ll~~ye~~~~kL~~e~~~kDsEi~~Lr~~L~e~~~~n~~Lek~l~~  161 (422)
                      +..|..|.+....---....++++|.+++..-+.+|..|+.+++++......|+.++..
T Consensus        14 Ia~L~eEGekLSk~el~~~~~IKKLr~~~~e~e~~~~~l~~~~~~~e~~~~~l~~~l~~   72 (74)
T PF12329_consen   14 IAQLMEEGEKLSKKELKLNNTIKKLRAKIKELEKQIKELKKKLEELEKELESLEERLKR   72 (74)
T ss_pred             HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            44566666665555566777899999999999999999999999999999999988764

The whole proteins bind to the TATA element of some RNA polymerase II promoters and repress their activity. by competing with the binding of TATA binding protein. TMFs are evolutionarily conserved golgins that bind Rab6, a ubiquitous ras-like GTP-binding Golgi protein, and contribute to Golgi organisation in animal [] and plant [] cells.

>PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association []

Probab=86.56  E-value=9  Score=39.00  Aligned_cols=124  Identities=20%  Similarity=0.272  Sum_probs=69.2

Q ss_pred             hHHHHHHHHHHHHHHhhhHHHHHHHHhhcCCCCh--hhHHHhHHHHHHHhhhhHHHHHHHhhCCCCCCCCCCcchhHHHH
Q 014589           32 PEALEALVSKIFSNISSLKSAYIELQAAHTPYDP--DKIQAADKLVISELKNLSELKHFYRENNPKPACISPQDSRLAAE  109 (422)
Q Consensus        32 ~~~~eali~~lFa~vSslK~AY~qLQ~Ah~Pydp--d~I~aAD~~vVseL~~ls~LK~~y~~~~~~~~~~~p~~~~l~ae  109 (422)
                      ....+.+...|-..+..|+.-|..|...-.=-|+  +++.+--..+-.|+.+|-.+....-.      +..-....+.++
T Consensus       144 ~~ll~gl~~~L~~~~~~L~~D~~~L~~~~~~l~~~~~~l~~~~~~L~~e~~~Lk~~~~e~~~------~D~~eL~~lr~e  217 (325)
T PF08317_consen  144 MQLLEGLKEGLEENLELLQEDYAKLDKQLEQLDELLPKLRERKAELEEELENLKQLVEEIES------CDQEELEALRQE  217 (325)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh------cCHHHHHHHHHH
Confidence            3344667888888888888888777632211110  12222223333344444333332111      111123445555


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhhhhhh
Q 014589          110 IQEQQSLLKTYEVMVKKFQSEIQNKDSEIHQLQQHIEDANQKRVKLEKNLKL  161 (422)
Q Consensus       110 i~E~q~ll~~ye~~~~kL~~e~~~kDsEi~~Lr~~L~e~~~~n~~Lek~l~~  161 (422)
                      +.++..-+......+.+|+.+++..+.+|..+..+..++.....++++.+..
T Consensus       218 L~~~~~~i~~~k~~l~el~~el~~l~~~i~~~~~~k~~l~~eI~e~~~~~~~  269 (325)
T PF08317_consen  218 LAEQKEEIEAKKKELAELQEELEELEEKIEELEEQKQELLAEIAEAEKIREE  269 (325)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            6665555555555666777777777777777777777777777777766553

>PF10205 KLRAQ: Predicted coiled-coil domain-containing protein; InterPro: IPR019343 This entry represents a N-terminal 100 residues long domain, which contains a conserved KLRAQ motif

Probab=86.03  E-value=3.5  Score=35.95  Aligned_cols=56  Identities=14%  Similarity=0.257  Sum_probs=46.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhhhhhh
Q 014589          106 LAAEIQEQQSLLKTYEVMVKKFQSEIQNKDSEIHQLQQHIEDANQKRVKLEKNLKL  161 (422)
Q Consensus       106 l~aei~E~q~ll~~ye~~~~kL~~e~~~kDsEi~~Lr~~L~e~~~~n~~Lek~l~~  161 (422)
                      |.|........+-+...-..+|+.+++.||.+|-.+.++++.+.-.|..|+||+-.
T Consensus        10 LraQ~~vLKKaVieEQ~k~~~L~e~Lk~ke~~LRk~eqE~dSL~FrN~QL~kRV~~   65 (102)
T PF10205_consen   10 LRAQNQVLKKAVIEEQAKNAELKEQLKEKEQALRKLEQENDSLTFRNQQLTKRVEV   65 (102)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            55555566666666666678999999999999999999999999999999999754

This domain is found in a family of coiled-coil domain-containing proteins that are conserved from nematodes to humans. These proteins also contain a C-terminal TTKRSYEDQ motif domain (IPR019348 from INTERPRO). The function of these proteins is not known.

>COG0497 RecN ATPase involved in DNA repair [DNA replication, recombination, and repair]

Probab=85.07  E-value=9.7  Score=42.02  Aligned_cols=89  Identities=19%  Similarity=0.293  Sum_probs=52.9

Q ss_pred             HhhhHHHHHHHHhh---------cCCCChhhHHHhHHHHHHHhhhhHHHHHHHhhCCCCCCCCCCcchhHHHHHHHHHHH
Q 014589           46 ISSLKSAYIELQAA---------HTPYDPDKIQAADKLVISELKNLSELKHFYRENNPKPACISPQDSRLAAEIQEQQSL  116 (422)
Q Consensus        46 vSslK~AY~qLQ~A---------h~Pydpd~I~aAD~~vVseL~~ls~LK~~y~~~~~~~~~~~p~~~~l~aei~E~q~l  116 (422)
                      +..+-.||.+|+.|         .++|||+.+..-    -+=|..|..|+|.|... +      +..-...+++++.-.-
T Consensus       268 ~~~l~ea~~~l~ea~~el~~~~~~le~Dp~~L~~v----e~Rl~~L~~l~RKY~~~-~------~~l~~~~~~~~~el~~  336 (557)
T COG0497         268 AELLEEALYELEEASEELRAYLDELEFDPNRLEEV----EERLFALKSLARKYGVT-I------EDLLEYLDKIKEELAQ  336 (557)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHH----HHHHHHHHHHHHHhCCC-H------HHHHHHHHHHHHHHHH
Confidence            44556689998877         469999998653    23355566666666543 1      2233455566665555


Q ss_pred             HHHHHHHHHHHHHHHhccchHHHHHHHHH
Q 014589          117 LKTYEVMVKKFQSEIQNKDSEIHQLQQHI  145 (422)
Q Consensus       117 l~~ye~~~~kL~~e~~~kDsEi~~Lr~~L  145 (422)
                      |...+.-.+.|+.++..-..+....-++|
T Consensus       337 L~~~~~~~~~Le~~~~~l~~~~~~~A~~L  365 (557)
T COG0497         337 LDNSEESLEALEKEVKKLKAELLEAAEAL  365 (557)
T ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            66666666666666655444444333333

>COG0576 GrpE Molecular chaperone GrpE (heat shock protein) [Posttranslational modification, protein turnover, chaperones]

Probab=83.36  E-value=1.4  Score=42.07  Aligned_cols=50  Identities=22%  Similarity=0.302  Sum_probs=39.6

Q ss_pred             cceeEEecCCCccccccccccccccccCCCCCCCeeEEEeeCCeeecCeEEEE
Q 014589          359 NVKVFQVNKGSEFSEVYMESVIKNLIIDEDDQKPTVGLMVMPGFWIGGSVIQS  411 (422)
Q Consensus       359 ~~~if~v~rg~~F~~~YMEsV~~~~~~~~~~~~~~V~ftV~PGF~vg~~vikc  411 (422)
                      .+..+.+ .|..|||.++|-|....  +.+..+..|.-.+-.||+++++||+-
T Consensus       135 Gv~~i~~-~Ge~FDP~~HeAv~~~~--~~~~~~~tVv~v~qkGY~l~dRVLRp  184 (193)
T COG0576         135 GVEEIGP-EGEKFDPNLHEAVQRVE--SEDVEPNTVVEVLQKGYKLNDRVLRP  184 (193)
T ss_pred             CCEEeCC-CCCCCCHHHhhheeeec--CCCCCCCeEEEEeecCeeeCCEeccc
Confidence            4666777 89999999999987642  23345677888899999999999973

>PRK09039 hypothetical protein; Validated

Probab=82.37  E-value=25  Score=36.34  Aligned_cols=65  Identities=15%  Similarity=0.159  Sum_probs=50.5

Q ss_pred             hhhHHHHHHHhhCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHH
Q 014589           80 KNLSELKHFYRENNPKPACISPQDSRLAAEIQEQQSLLKTYEVMVKKFQSEIQNKDSEIHQLQQHIEDANQK  151 (422)
Q Consensus        80 ~~ls~LK~~y~~~~~~~~~~~p~~~~l~aei~E~q~ll~~ye~~~~kL~~e~~~kDsEi~~Lr~~L~e~~~~  151 (422)
                      +.|.++|..|...       .|++..|.++|...+.-+...+..+..+|.+.+..+..|..|+++|+.+...
T Consensus       123 ~~L~~~k~~~se~-------~~~V~~L~~qI~aLr~Qla~le~~L~~ae~~~~~~~~~i~~L~~~L~~a~~~  187 (343)
T PRK09039        123 QELDSEKQVSARA-------LAQVELLNQQIAALRRQLAALEAALDASEKRDRESQAKIADLGRRLNVALAQ  187 (343)
T ss_pred             HHHHHHHHHHHHh-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5788888888875       3678888888888887787778888888888877777888888777766533

>PRK10869 recombination and repair protein; Provisional

Probab=81.44  E-value=17  Score=39.91  Aligned_cols=12  Identities=17%  Similarity=0.030  Sum_probs=5.4

Q ss_pred             hhhhHHHHHHHh
Q 014589           79 LKNLSELKHFYR   90 (422)
Q Consensus        79 L~~ls~LK~~y~   90 (422)
                      |..|..|||.|.
T Consensus       305 l~~l~~L~rKyg  316 (553)
T PRK10869        305 LSKQISLARKHH  316 (553)
T ss_pred             HHHHHHHHHHhC
Confidence            334444444444

>PF15290 Syntaphilin: Golgi-localised syntaxin-1-binding clamp

Probab=81.37  E-value=12  Score=38.11  Aligned_cols=80  Identities=16%  Similarity=0.384  Sum_probs=53.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhh-hhhhhcCCCCCCCCCCCCCCCCCCCCCC
Q 014589          106 LAAEIQEQQSLLKTYEVMVKKFQSEIQNKDSEIHQLQQHIEDANQKRVKLE-KNLKLRGLSTKESEGSGGENGFFPVDLT  184 (422)
Q Consensus       106 l~aei~E~q~ll~~ye~~~~kL~~e~~~kDsEi~~Lr~~L~e~~~~n~~Le-k~l~~~~ls~~~~~~~~~~~~~~s~~~s  184 (422)
                      -+-.+|...-.+|-..+-+++-+..+..||+||.+||.+|......=-+=| +|+-.                       
T Consensus        59 YLTPLQQKEV~iRHLkakLkes~~~l~dRetEI~eLksQL~RMrEDWIEEECHRVEA-----------------------  115 (305)
T PF15290_consen   59 YLTPLQQKEVCIRHLKAKLKESENRLHDRETEIDELKSQLARMREDWIEEECHRVEA-----------------------  115 (305)
T ss_pred             hcChHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------
Confidence            334456555666667777788888888999999999999975433221111 22110                       


Q ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHHhc
Q 014589          185 PDLFTQAVEAAYKAIHDFSKPLINMMKAA  213 (422)
Q Consensus       185 p~~F~~~~~~A~~si~~FaK~Li~~M~~a  213 (422)
                          .-+|.+||+-|+++ |-.|.-||++
T Consensus       116 ----QLALKEARkEIkQL-kQvieTmrss  139 (305)
T PF15290_consen  116 ----QLALKEARKEIKQL-KQVIETMRSS  139 (305)
T ss_pred             ----HHHHHHHHHHHHHH-HHHHHHHHhh
Confidence                23688899999886 6667777776

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	422
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 47.9 bits (113), Expect = 5e-06
 Identities = 49/326 (15%), Positives = 104/326 (31%), Gaps = 76/326 (23%)

Query: 14  SNSQKVHPQPMEEAMNQNPEALEALVSKIFS-NISSLKSA-------YIELQAAHTPYDP 65
           S +   H      +M   P+ +++L+ K        L           + + A       
Sbjct: 282 SAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGL 341

Query: 66  DKIQ-----AADKL--VISE-LKNLS--ELKHFYRENN--PKPACISPQD-SRLAAEIQE 112
                      DKL  +I   L  L   E +  +   +  P  A I     S +  ++ +
Sbjct: 342 ATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIK 401

Query: 113 QQSLLKTYEVMVKKFQS----EIQNKDS--EIHQLQQHIEDANQKRVKLEKNLKLRGLST 166
                    V+V K       E Q K+S   I  +   ++   +    L +++ +   + 
Sbjct: 402 SDV-----MVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSI-VDHYNI 455

Query: 167 KESEGSGGENGFFPVDLTPD-----LFT------QAVEAAYKAIHDFSKPLINM------ 209
            +         F   DL P       ++      + +E   + +  F    ++       
Sbjct: 456 PK--------TFDSDDLIPPYLDQYFYSHIGHHLKNIEHPER-MTLFRMVFLDFRFLEQK 506

Query: 210 MKAAGWDLDSAANSIEPNVVYAKRAHKKYAFESH-ICQRMFTGFQQEDFSVK-SENLIVN 267
           ++      +++ + +  N +   + +K Y  ++    +R+       DF  K  ENLI +
Sbjct: 507 IRHDSTAWNASGSIL--NTLQQLKFYKPYICDNDPKYERLVNAI--LDFLPKIEENLICS 562

Query: 268 KESFFHQFLALREIDPLDVLGQNPDS 293
           K +   + +AL             D 
Sbjct: 563 KYTDLLR-IAL----------MAEDE 577

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.0 bits (95), Expect = 8e-04
 Identities = 57/454 (12%), Positives = 120/454 (26%), Gaps = 162/454 (35%)

Query: 11  LRESNSQKVHPQPMEEAMNQNPEALEALVSKIFSNISSLKSAYIE----LQAAHTPYDPD 66
           L     + V  + +EE +  N + L + +       S +   YIE    L   +  +   
Sbjct: 71  LLSKQEEMVQ-KFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKY 129

Query: 67  KIQAADKLVISELKN-LSELKHFYREN--------------------NPKPACISP---- 101
            +         +L+  L EL+    +N                    + K  C       
Sbjct: 130 NVSRLQP--YLKLRQALLELRP--AKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIF 185

Query: 102 -----QDSRLAAEIQEQQSLLKTYEVMVKKFQSEIQNKDSEIHQLQQHIEDANQKRVKLE 156
                  +     ++  Q L      +   + S   +  +    ++  I           
Sbjct: 186 WLNLKNCNSPETVLEMLQKL---LYQIDPNWTSRSDHSSN----IKLRIHSIQA------ 232

Query: 157 KNLKLRGLSTKESEGSGGENGFFPVDLTPDLFTQAVEAAYKAIHDFSKPLINMMKAAGWD 216
              +LR                        L              +   L+         
Sbjct: 233 ---ELR-----------------------RLLKS---------KPYENCLL--------V 249

Query: 217 LDSAANSIEPNVVYAKRAHKKYAFESHICQRMFT-----------GFQQEDFSVKSENLI 265
           L +         V   +A    AF    C+ + T                  S+   ++ 
Sbjct: 250 LLN---------VQNAKAWN--AFNLS-CKILLTTRFKQVTDFLSAATTTHISLDHHSMT 297

Query: 266 VNK---ESFFHQFLALREID-PLDVLGQNPD--SNFGKFCRSK------YLAVLHPKME- 312
           +     +S   ++L  R  D P +VL  NP   S   +  R        +  V   K+  
Sbjct: 298 LTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTT 357

Query: 313 --ASFFGNLDQRNFVMGGGHPRTPFYQAFLKLAKLIWLLHRLAYSFEPNVK----VFQV- 365
              S    L+          P   + + F +L+  +         F P+      +  + 
Sbjct: 358 IIESSLNVLE----------PAE-YRKMFDRLS--V---------FPPSAHIPTILLSLI 395

Query: 366 --NKGSEFSEVYMESVIKNLIIDEDDQKPTVGLM 397
             +       V +  + K  ++++  ++ T+ + 
Sbjct: 396 WFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIP 429

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	422
1zxa_A	67	CGMP-dependent protein kinase 1, alpha isozyme; pa	92.23
3nmd_A	72	CGMP dependent protein kinase; leucine zipper, coi	90.83
1t6f_A	37	Geminin; coiled-coil, cell cycle; 1.47A {Synthetic	83.27
3a6m_A	177	Protein GRPE, HSP-70 cofactor; coiled-coil, four-h	82.42
1dkg_A	197	Nucleotide exchange factor GRPE; HSP70, GRPE, nucl	80.58

>1zxa_A CGMP-dependent protein kinase 1, alpha isozyme; parallel coiled coil dimer, transferase; NMR {Homo sapiens}

Probab=92.23  E-value=0.14  Score=40.26  Aligned_cols=45  Identities=16%  Similarity=0.319  Sum_probs=32.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHH
Q 014589          106 LAAEIQEQQSLLKTYEVMVKKFQSEIQNKDSEIHQLQQHIEDANQ  150 (422)
Q Consensus       106 l~aei~E~q~ll~~ye~~~~kL~~e~~~kDsEi~~Lr~~L~e~~~  150 (422)
                      +..-.++.+..++.-+..++.||.+++.||.||.+||.+|+...+
T Consensus         9 ~~~~~e~~~~~i~~Kde~I~eLE~~L~~kd~eI~eLr~~LdK~qs   53 (67)
T 1zxa_A            9 TSELEEDFAKILMLKEERIKELEKRLSEKEEEIQELKRKLHKCQS   53 (67)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred             chHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            344556777788888888999999999999999999999985443

>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}

Probab=90.83  E-value=0.3  Score=38.82  Aligned_cols=31  Identities=19%  Similarity=0.453  Sum_probs=21.6

Q ss_pred             HHHHHHHHHHHHHHhccchHHHHHHHHHHHH
Q 014589          118 KTYEVMVKKFQSEIQNKDSEIHQLQQHIEDA  148 (422)
Q Consensus       118 ~~ye~~~~kL~~e~~~kDsEi~~Lr~~L~e~  148 (422)
                      +.-+..++.|+.+++.||++|..|+.+|+..
T Consensus        36 r~kd~~I~eLEk~L~ekd~eI~~LqseLDKf   66 (72)
T 3nmd_A           36 RQRDALIDELELELDQKDELIQMLQNELDKY   66 (72)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            3344447777778888888888887777644

>1t6f_A Geminin; coiled-coil, cell cycle; 1.47A {Synthetic} SCOP: h.1.28.1

Probab=83.27  E-value=1.4  Score=30.49  Aligned_cols=26  Identities=31%  Similarity=0.509  Sum_probs=21.7

Q ss_pred             HHHHHHHHhccchHHHHHHHHHHHHH
Q 014589          124 VKKFQSEIQNKDSEIHQLQQHIEDAN  149 (422)
Q Consensus       124 ~~kL~~e~~~kDsEi~~Lr~~L~e~~  149 (422)
                      .++|..+|..||.||..||++=.++.
T Consensus         9 NekLhk~ie~KdeeIa~Lk~eN~eL~   34 (37)
T 1t6f_A            9 NEKLHKEIEQKDNEIARLKKENKELA   34 (37)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence            47888899999999999998766553

>3a6m_A Protein GRPE, HSP-70 cofactor; coiled-coil, four-helix bundle, dimer, chaperone, STRE response; 3.23A {Thermus thermophilus}

Probab=82.42  E-value=1.8  Score=39.44  Aligned_cols=55  Identities=24%  Similarity=0.310  Sum_probs=41.1

Q ss_pred             ceeEEecCCCccccccccccccccccCCCCCCCeeEEEeeCCeeecCeEEE-EEEEeeccCC
Q 014589          360 VKVFQVNKGSEFSEVYMESVIKNLIIDEDDQKPTVGLMVMPGFWIGGSVIQ-SRVYLSGVKV  420 (422)
Q Consensus       360 ~~if~v~rg~~F~~~YMEsV~~~~~~~~~~~~~~V~ftV~PGF~vg~~vik-c~VyLs~~~~  420 (422)
                      +..+.. .|..|||.+.|-|....   .  .+..|.-.+-+|++++++||+ ++|-++....
T Consensus       116 v~~i~~-~Ge~FDP~~HeAv~~~~---~--~~gtVv~v~qkGY~l~dRvLRpA~V~V~~~~~  171 (177)
T 3a6m_A          116 VEEVPG-EGEAFDPRYHEAVGLLP---G--EPGKVAKVFQRGFRMGEALVRPARVAVGEEKR  171 (177)
T ss_dssp             CEECCC-TTSBCCTTTEEEEEEEE---S--STTBEEEEEECCEEETTEEEECEEEEEEECCC
T ss_pred             CEEeCC-CCCCCCHHHhhhhhccc---C--CcCeEEEEeecCeeeCCEEecCeEEEEeCCCC
Confidence            344443 59999999999886432   1  456788899999999999998 5887776443

>1dkg_A Nucleotide exchange factor GRPE; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: b.73.1.1 h.1.9.1

Probab=80.58  E-value=2.3  Score=39.37  Aligned_cols=56  Identities=16%  Similarity=0.170  Sum_probs=40.9

Q ss_pred             cceeEEecCCCccccccccccccccccCCCCCCCeeEEEeeCCeeecCeEEE-EEEEeec
Q 014589          359 NVKVFQVNKGSEFSEVYMESVIKNLIIDEDDQKPTVGLMVMPGFWIGGSVIQ-SRVYLSG  417 (422)
Q Consensus       359 ~~~if~v~rg~~F~~~YMEsV~~~~~~~~~~~~~~V~ftV~PGF~vg~~vik-c~VyLs~  417 (422)
                      .+..+.. .|..|||.+.|-|..... + +..+..|.-.+-+|++++++||+ ++|-++.
T Consensus       138 Gv~~i~~-~G~~FDP~~HeAv~~~~~-~-~~~~~tVv~v~qkGY~l~dRvLRpA~V~V~~  194 (197)
T 1dkg_A          138 GVEVIAE-TNVPLDPNVHQAIAMVES-D-DVAPGNVLGIMQKGYTLNGRTIRAAMVTVAK  194 (197)
T ss_dssp             TEEEECC-CSSBCCTTSEEEEEEEEC-S-SSCTTBEEEEEECEEEETTEEEECEEEEEEE
T ss_pred             CCEEeCC-CCCCCCHHHhheeeeecC-C-CCCcCeEEEEeeCCeeeCCEEecceEEEecC
Confidence            3444543 599999999998864321 2 22456788899999999999998 5777665

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	422
d1dkga1	59	Head domain of nucleotide exchange factor GrpE {Es	93.5

>d1dkga1 b.73.1.1 (A:139-197) Head domain of nucleotide exchange factor GrpE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: Head domain of nucleotide exchange factor GrpE
superfamily: Head domain of nucleotide exchange factor GrpE
family: Head domain of nucleotide exchange factor GrpE
domain: Head domain of nucleotide exchange factor GrpE
species: Escherichia coli [TaxId: 562]

Probab=93.50  E-value=0.073  Score=38.82  Aligned_cols=51  Identities=12%  Similarity=0.133  Sum_probs=38.3

Q ss_pred             cCCCccccccccccccccccCCCCCCCeeEEEeeCCeeecCeEEE-EEEEeecc
Q 014589          366 NKGSEFSEVYMESVIKNLIIDEDDQKPTVGLMVMPGFWIGGSVIQ-SRVYLSGV  418 (422)
Q Consensus       366 ~rg~~F~~~YMEsV~~~~~~~~~~~~~~V~ftV~PGF~vg~~vik-c~VyLs~~  418 (422)
                      ..|..|||.+||-+.....  .+..+-.|.=.+-+|++++++||+ ++|-++..
T Consensus         6 ~~g~~FDP~~HeAv~~~~~--~~~~~~~I~~v~~~GY~~~~rvlRpA~V~V~k~   57 (59)
T d1dkga1           6 ETNVPLDPNVHQAIAMVES--DDVAPGNVLGIMQKGYTLNGRTIRAAMVTVAKA   57 (59)
T ss_dssp             CCSSBCCTTSEEEEEEEEC--SSSCTTBEEEEEECEEEETTEEEECEEEEEEEC
T ss_pred             CCCCCCCHHHceEeeEecC--CCCCCCEEEEEEeCCcEECCEEeeccEEEEecC
Confidence            4589999999999875332  222445777899999999999997 56766643