Citrus Sinensis ID: 014694
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 420 | 2.2.26 [Sep-21-2011] | |||||||
| Q8LGI2 | 454 | Probable mitochondrial sa | yes | no | 0.969 | 0.896 | 0.68 | 1e-171 | |
| Q8R127 | 429 | Saccharopine dehydrogenas | yes | no | 0.914 | 0.895 | 0.331 | 6e-59 | |
| Q8NBX0 | 429 | Saccharopine dehydrogenas | yes | no | 0.914 | 0.895 | 0.338 | 8e-58 | |
| Q6AY30 | 429 | Saccharopine dehydrogenas | yes | no | 0.914 | 0.895 | 0.322 | 1e-57 | |
| Q5R5C9 | 429 | Saccharopine dehydrogenas | yes | no | 0.914 | 0.895 | 0.331 | 7e-57 | |
| Q3T067 | 429 | Saccharopine dehydrogenas | yes | no | 0.907 | 0.888 | 0.314 | 4e-56 | |
| Q7D745 | 419 | Putative trans-acting eno | yes | no | 0.280 | 0.281 | 0.354 | 4e-15 | |
| O53176 | 419 | Putative trans-acting eno | yes | no | 0.280 | 0.281 | 0.354 | 4e-15 | |
| Q9CD87 | 418 | Trans-acting enoyl reduct | yes | no | 0.261 | 0.263 | 0.353 | 1e-13 | |
| P95139 | 418 | Trans-acting enoyl reduct | yes | no | 0.261 | 0.263 | 0.327 | 9e-13 |
| >sp|Q8LGI2|SCPDL_ARATH Probable mitochondrial saccharopine dehydrogenase-like oxidoreductase At5g39410 OS=Arabidopsis thaliana GN=At5g39410 PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 600 bits (1548), Expect = e-171, Method: Compositional matrix adjust.
Identities = 306/450 (68%), Positives = 364/450 (80%), Gaps = 43/450 (9%)
Query: 5 SQIPE-LFDVIILGASGFTGKYVVREALKLFNFPSS-PIKSLALAGRNPTRVKQALQWAS 62
+Q PE ++D++ILGASGFTGKYVVREALK PSS P+KSLALAGRNPTR+ Q+L+WA+
Sbjct: 4 TQKPEPVYDMVILGASGFTGKYVVREALKFLQTPSSSPLKSLALAGRNPTRLTQSLEWAA 63
Query: 63 -----PSHSLSIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDY 117
PS S+ ILTADT+DP SL RLC+QTKL+LNCVGP+R+HGDPV +AC SGCDY
Sbjct: 64 RPNPPPS---SVAILTADTSDPDSLRRLCTQTKLILNCVGPFRIHGDPVVSACADSGCDY 120
Query: 118 LDISGEPEFMERMEA--------------------------------RQWIPPAVPNQIE 145
LDISGEPEFMERMEA +QW+ P+VPNQIE
Sbjct: 121 LDISGEPEFMERMEANYHDRAEETGSLIVSACGFDSIPAELGLLFNAKQWVSPSVPNQIE 180
Query: 146 AYVSLESDKRIVGNFGTYESAVLGVANAQELQKLRRSRPRRARPVIPGPAPLRGPLVESQ 205
AY+SLESDK+I GNFGTYESAVLGVANA++L++LRRSRPRR RP I GP P +GP +E+Q
Sbjct: 181 AYLSLESDKKIAGNFGTYESAVLGVANAEKLKELRRSRPRRPRPTICGP-PAKGPTLENQ 239
Query: 206 KRIGLWAIKLPSADATVVRRTLSILTENPHGLPGANESPEQREKREAFWSTVKPAHFGVK 265
K IGLWA+KLPSADA VVRRTL+ LTE PHGLPG NESPEQ +KREAFWS++KPAHFGVK
Sbjct: 240 KTIGLWALKLPSADAVVVRRTLTTLTEKPHGLPGINESPEQIQKREAFWSSIKPAHFGVK 299
Query: 266 LGSKSLLDIFRFIILGISIGLLSGLSFGRWLLLKFPSIFSLGWFRKRGPSEDEVESASFK 325
+ SKSL IFR++ LG+S+GLLS SFGRWLLLKFPS+FSLGWF+K+GPSE+EVESA+FK
Sbjct: 300 ITSKSLFGIFRYVTLGVSLGLLSKFSFGRWLLLKFPSVFSLGWFQKKGPSEEEVESATFK 359
Query: 326 MWFIGHGFSDSSLVSQGNAKPDMEIITRVTGPEIGYIATPIILMQCALIVLSQREILPKG 385
MWFIG G+S+ SL SQG KPD+EIITR++GPEIGYI TPI L+QC LIVL QRE L KG
Sbjct: 360 MWFIGRGYSEESLASQGETKPDLEIITRISGPEIGYITTPITLVQCGLIVLGQRESLVKG 419
Query: 386 GVFPPGIVFGATELQQRLQENGISFDVISK 415
GV+ PGIVFG+T++QQRL++NGISF++ISK
Sbjct: 420 GVYTPGIVFGSTDIQQRLEDNGISFELISK 449
|
Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: -EC: .EC: -EC: .EC: - |
| >sp|Q8R127|SCPDL_MOUSE Saccharopine dehydrogenase-like oxidoreductase OS=Mus musculus GN=Sccpdh PE=2 SV=1 | Back alignment and function description |
|---|
Score = 228 bits (581), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 148/446 (33%), Positives = 232/446 (52%), Gaps = 62/446 (13%)
Query: 11 FDVIILGASGFTGKYVVRE-ALKLFNFPSSPIKSLALAGRNPTRVKQALQWAS-----PS 64
F +++ GASGFTG++V E A + S A+AGR+ +++Q L+ A+ PS
Sbjct: 8 FHLVVFGASGFTGQFVTEEVAREQIASEQSSRLPWAVAGRSKEKLQQVLEKAAQKLGRPS 67
Query: 65 HSLSIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEP 124
S + ++ D ++P SL + Q KL+LNCVGPYR +G+PV AC+ +G +DI GEP
Sbjct: 68 LSSEVGVIICDISNPASLDEMAKQAKLVLNCVGPYRFYGEPVVKACIENGTSCIDICGEP 127
Query: 125 EFMERMEARQWIPPA--------------VP---------NQ-------IEAYVSLESD- 153
+F+E M A+ A +P NQ +E+++++ +
Sbjct: 128 QFLELMHAKYHEKAAEKGVYIIGSSGFDSIPADLGVLYTRNQMNGTLTAVESFLTINTGP 187
Query: 154 KRIVGNFGTYESAVLGVANAQELQKLRRSRPRRARPVIPGPAPLRGPLVESQKRIGLWAI 213
+ + + GT++SA+ G + L+KLR + P++ R P V + + ++I
Sbjct: 188 EGLCIHDGTWKSAIYGFGDKGSLRKLRSVSCLKPVPIVGTKLKRRWP-VSYCRELNSYSI 246
Query: 214 KLPSADATVVRRTLSILTENPHGLPGANESPEQREKREAFWSTVKPAHFGVKLGSKSLLD 273
+D +VV+RT L EN +SP Q A + TV +
Sbjct: 247 PFLGSDISVVKRTQRYLHEN------LEDSPVQY----AAYVTVG-----------GITS 285
Query: 274 IFRFIILGISIGLLSGLSFGRWLLLKFPSIFSLGWFRKRGPSEDEVESASFKMWFIGHGF 333
+ + + G+ S GR LL+KFP +FS G+F K+GP++ +++ SF M F G G+
Sbjct: 286 VIKLMFAGLFFLFFVKFSIGRQLLIKFPWLFSFGYFSKQGPTQKQMDETSFTMTFFGQGY 345
Query: 334 SDSSLVSQGNAKPDMEIITRVTGPEIGYIATPIILMQCALIVLSQREILPK-GGVFPPGI 392
S + V + KP++ I T+V GPE GY+ATPI ++Q A+ LS LPK GGVF PG
Sbjct: 346 SHGTCVEKN--KPNIRICTQVKGPEAGYVATPIAMVQAAMTFLSDASDLPKGGGVFTPGA 403
Query: 393 VFGATELQQRLQENGISFDVISKSSL 418
F T+L RL ++GI F VIS S +
Sbjct: 404 AFSRTKLIDRLNKHGIEFSVISSSEV 429
|
Mus musculus (taxid: 10090) EC: 1 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|Q8NBX0|SCPDL_HUMAN Saccharopine dehydrogenase-like oxidoreductase OS=Homo sapiens GN=SCCPDH PE=1 SV=1 | Back alignment and function description |
|---|
Score = 224 bits (572), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 151/446 (33%), Positives = 233/446 (52%), Gaps = 62/446 (13%)
Query: 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIK-SLALAGRNPTRV-----KQALQWASPS 64
F +++ GASGFTG++V E + P + A+AGR+ ++ K AL+ P+
Sbjct: 8 FHLVVFGASGFTGQFVTEEVAREQVDPERSSRLPWAVAGRSREKLQRVLEKAALKLGRPT 67
Query: 65 HSLSIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEP 124
S + I+ D +P SL + Q ++LNCVGPYR +G+PV AC+ +G +DISGEP
Sbjct: 68 LSSEVGIIICDIANPASLDEMAKQATVVLNCVGPYRFYGEPVIKACIENGASCIDISGEP 127
Query: 125 EFMERMEARQWIPPA--------------VP----------------NQIEAYVSLESD- 153
+F+E M+ + A +P +E+++++ S
Sbjct: 128 QFLELMQLKYHEKAADKGVYIIGSSGFDSIPADLGVIYTRNKMNGTLTAVESFLTIHSGP 187
Query: 154 KRIVGNFGTYESAVLGVANAQELQKLRRSRPRRARPVIPGPAPLRGPLVESQKRIGLWAI 213
+ + + GT++SA+ G + L+KLR + P+I R P+ ++ G ++I
Sbjct: 188 EGLSIHDGTWKSAIYGFGDQSNLRKLRNVSNLKPVPLIGPKLKRRWPISYCRELKG-YSI 246
Query: 214 KLPSADATVVRRTLSILTENPHGLPGANESPEQREKREAFWSTVKPAHFGVKLGSKSLLD 273
+D +VVRRT L EN ESP Q A + TV +KL L
Sbjct: 247 PFMGSDVSVVRRTQRYLYEN------LEESPVQY----AAYVTVGGITSVIKLMFAGLFF 296
Query: 274 IFRFIILGISIGLLSGLSFGRWLLLKFPSIFSLGWFRKRGPSEDEVESASFKMWFIGHGF 333
+F F+ GI GR LL+KFP FS G+F K+GP++ ++++ASF + F G G+
Sbjct: 297 LF-FVRFGI----------GRQLLIKFPWFFSFGYFSKQGPTQKQIDAASFTLTFFGQGY 345
Query: 334 SDSSLVSQGNAKPDMEIITRVTGPEIGYIATPIILMQCALIVLSQREILPK-GGVFPPGI 392
S + + KP+++I T+V GPE GY+ATPI ++Q A+ +LS LPK GGVF PG
Sbjct: 346 SQGTGTDKN--KPNIKICTQVKGPEAGYVATPIAMVQAAMTLLSDASHLPKAGGVFTPGA 403
Query: 393 VFGATELQQRLQENGISFDVISKSSL 418
F T+L RL ++GI F VIS S +
Sbjct: 404 AFSKTKLIDRLNKHGIEFSVISSSEV 429
|
Homo sapiens (taxid: 9606) EC: 1 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|Q6AY30|SCPDL_RAT Saccharopine dehydrogenase-like oxidoreductase OS=Rattus norvegicus GN=Sccpdh PE=2 SV=1 | Back alignment and function description |
|---|
Score = 224 bits (570), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 144/446 (32%), Positives = 224/446 (50%), Gaps = 62/446 (13%)
Query: 11 FDVIILGASGFTGKYVVRE-ALKLFNFPSSPIKSLALAGRNPTRVKQALQWAS-----PS 64
F +++ GASGFTG++V E A + S A+AGR+ +++Q L+ A+ +
Sbjct: 8 FQLVVFGASGFTGQFVTEEVAREQMASEQSSRLPWAVAGRSKEKLQQVLEKAAQKLGRAT 67
Query: 65 HSLSIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEP 124
S + I+ D ++P SL + + L+LNCVGPYR +G+PV AC+ +G +DI GEP
Sbjct: 68 LSSEVGIIICDISNPASLDEMAKKATLVLNCVGPYRFYGEPVVKACIENGTSCIDICGEP 127
Query: 125 EFMERMEARQWIPPA--------------VP---------NQ-------IEAYVSLESD- 153
+F+E M + A +P NQ +E+++++ S
Sbjct: 128 QFLELMHVKYHEKAAEKGVYIIGSSGFDSIPADLGVLYTRNQMNGTLTAVESFLTINSGP 187
Query: 154 KRIVGNFGTYESAVLGVANAQELQKLRRSRPRRARPVIPGPAPLRGPLVESQKRIGLWAI 213
+ + + GT++SA+ G + L+KLR + PVI R P V + + +AI
Sbjct: 188 EGLCIHDGTWKSAIYGFGDKGSLRKLRSVSNLKPVPVIGSKLKRRWP-VSYCRELNSYAI 246
Query: 214 KLPSADATVVRRTLSILTENPHGLPGANESPEQREKREAFWSTVKPAHFGVKLGSKSLLD 273
+D +VV+RT L EN P + + +
Sbjct: 247 PFLGSDMSVVKRTQRYLHENLED---------------------SPVQYAAYITVGGITS 285
Query: 274 IFRFIILGISIGLLSGLSFGRWLLLKFPSIFSLGWFRKRGPSEDEVESASFKMWFIGHGF 333
+ + + G+ S GR LL+KFP +FS G+F KRGP++ +++ +SF M F G G+
Sbjct: 286 VIKLMFAGLFFLFFVKFSIGRQLLVKFPWLFSFGYFSKRGPTQKQMDESSFTMTFFGQGY 345
Query: 334 SDSSLVSQGNAKPDMEIITRVTGPEIGYIATPIILMQCALIVLSQREILPK-GGVFPPGI 392
S VS KP++ I T+V GPE GY+ATPI ++Q A+ L+ LPK GGVF PG
Sbjct: 346 SHG--VSAEKNKPNIRICTQVKGPEAGYVATPIAMVQAAVTFLNDASDLPKGGGVFTPGA 403
Query: 393 VFGATELQQRLQENGISFDVISKSSL 418
F T+L RL ++GI F VIS S +
Sbjct: 404 AFSRTKLIDRLNQHGIQFSVISSSEV 429
|
Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|Q5R5C9|SCPDL_PONAB Saccharopine dehydrogenase-like oxidoreductase OS=Pongo abelii GN=SCCPDH PE=2 SV=1 | Back alignment and function description |
|---|
Score = 221 bits (564), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 148/446 (33%), Positives = 233/446 (52%), Gaps = 62/446 (13%)
Query: 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIK-SLALAGRNPTRV-----KQALQWASPS 64
F +++ GASGFTG++V E + P + A+AGR+ ++ K AL+ P+
Sbjct: 8 FHLVVFGASGFTGQFVTEEVAREQVDPERSSRLPWAVAGRSREKLQRVLEKAALKLGRPT 67
Query: 65 HSLSIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEP 124
S + I+ D +P SL + Q ++ NCVGPYR +G+PV AC+ +G +DISGEP
Sbjct: 68 LSSEVGIIICDIANPASLDEMAKQATVVPNCVGPYRFYGEPVIKACIENGASCIDISGEP 127
Query: 125 EFMERMEARQWIPPA--------------VP----------------NQIEAYVSLESD- 153
+F+E M+ + A +P +E+++++ S
Sbjct: 128 QFLELMQLKYHEKAADKGVYIIGSSGFDSIPADLGVIYTRNKMNGTLTAVESFLTIHSGP 187
Query: 154 KRIVGNFGTYESAVLGVANAQELQKLRRSRPRRARPVIPGPAPLRGPLVESQKRIGLWAI 213
+ + + GT++SA+ G + L+KLR + + P++ GP R + + + ++I
Sbjct: 188 EGLSIHDGTWKSAIYGFGDQSNLRKLRNASNLKPVPLV-GPKLKRRWPISYCRELKGYSI 246
Query: 214 KLPSADATVVRRTLSILTENPHGLPGANESPEQREKREAFWSTVKPAHFGVKLGSKSLLD 273
+D +VVRRT L EN ESP Q A ++TV +KL L
Sbjct: 247 PFMGSDVSVVRRTQRYLYEN------LEESPVQY----AAYATVGGITSVIKLMFAGLFF 296
Query: 274 IFRFIILGISIGLLSGLSFGRWLLLKFPSIFSLGWFRKRGPSEDEVESASFKMWFIGHGF 333
+F F+ GI GR LL+KFP FS G+F K+GP++ ++++ASF + F G G+
Sbjct: 297 LF-FVRFGI----------GRQLLIKFPWFFSFGYFSKQGPTQKQIDAASFTLTFFGQGY 345
Query: 334 SDSSLVSQGNAKPDMEIITRVTGPEIGYIATPIILMQCALIVLSQREILPK-GGVFPPGI 392
S + KP+++I T+V GPE GY+ATPI ++Q A+ +L+ LPK GGVF PG
Sbjct: 346 SQG--IGTDKNKPNIKICTQVKGPEAGYVATPIAMVQAAMTLLNDASHLPKAGGVFTPGA 403
Query: 393 VFGATELQQRLQENGISFDVISKSSL 418
F T+L RL ++GI F VIS S +
Sbjct: 404 AFSKTKLIDRLNKHGIEFSVISSSEV 429
|
Pongo abelii (taxid: 9601) EC: 1 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|Q3T067|SCPDL_BOVIN Saccharopine dehydrogenase-like oxidoreductase OS=Bos taurus GN=SCCPDH PE=2 SV=1 | Back alignment and function description |
|---|
Score = 219 bits (557), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 141/449 (31%), Positives = 227/449 (50%), Gaps = 68/449 (15%)
Query: 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKS----LALAGRNPTRV-----KQALQWA 61
F +++ GASGFTG++V E + SP ++ A+AGR+ ++ + A++
Sbjct: 8 FHLVVFGASGFTGQFVTEEVARE---QVSPERTSHLPWAVAGRSREKLLRVLERAAMKLG 64
Query: 62 SPSHSLSIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121
P+ S + I+ D T+P SL + Q ++LNCVGPYR +G+PV AC+ +G +DIS
Sbjct: 65 RPTLSSEVGIIICDITNPASLDEMAKQATVVLNCVGPYRFYGEPVIKACIENGTSCIDIS 124
Query: 122 GEPEFMERMEARQWIPPA--------------VP----------------NQIEAYVSLE 151
GEP+F+E M + A +P +E+++++
Sbjct: 125 GEPQFLELMYWKYHEKAAEKGVYIIGSSGFDSIPADLGVIYTRNKMNGTLTAVESFLTIS 184
Query: 152 SD-KRIVGNFGTYESAVLGVANAQELQKLRRSRPRRARPVIPGPAPLRGPLVESQKRIGL 210
S + + + GT++SAV G + L+KLR + P++ GP R + + +
Sbjct: 185 SGPEGLCVHDGTWKSAVYGFGDKSNLKKLRNESDMKPVPIV-GPKLKRRWPISYCRELNS 243
Query: 211 WAIKLPSADATVVRRTLSILTENPHGLPGANESPEQREKREAFWSTVKPAHFGVKLGSKS 270
++I AD +VV+RT L EN EQ P + +
Sbjct: 244 YSIPFLGADVSVVKRTQRYLHENL----------EQ-----------SPVQYAAYINVGG 282
Query: 271 LLDIFRFIILGISIGLLSGLSFGRWLLLKFPSIFSLGWFRKRGPSEDEVESASFKMWFIG 330
+ + + + G+ GR LL+KF +FS G+F K+GP++ +++++SF M F G
Sbjct: 283 ITSVIKLMFAGLFFLFFVRFGIGRQLLIKFTWLFSFGYFSKQGPTQKQIDASSFTMTFFG 342
Query: 331 HGFSDSSLVSQGNAKPDMEIITRVTGPEIGYIATPIILMQCALIVLSQREILPK-GGVFP 389
GFS VS KP++ I T+V GPE GY++T I ++Q A+I+L+ LPK GGVF
Sbjct: 343 QGFSQG--VSPVKNKPNIRICTQVKGPEAGYVSTSIAMVQAAMILLNDASDLPKAGGVFT 400
Query: 390 PGIVFGATELQQRLQENGISFDVISKSSL 418
PG F T+L RL E+GI F VIS + +
Sbjct: 401 PGAAFSRTKLIDRLNEHGIEFSVISSTEV 429
|
Bos taurus (taxid: 9913) EC: 1 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|Q7D745|Y2525_MYCTU Putative trans-acting enoyl reductase MT2525 OS=Mycobacterium tuberculosis GN=MT2525 PE=3 SV=2 | Back alignment and function description |
|---|
Score = 82.8 bits (203), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 71/124 (57%), Gaps = 6/124 (4%)
Query: 5 SQIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS 64
+ P FD+++ GA+GF GK + + +ALAGR+ RV A++ A
Sbjct: 2 TATPREFDIVLYGATGFVGKLTAEYLAR-----AGGDARIALAGRSTQRV-LAVREALGE 55
Query: 65 HSLSIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEP 124
+ + PILTAD + P +L + ++ ++++ VGPY +G P+ AAC +G DY D++GEP
Sbjct: 56 SAQTWPILTADASLPSTLQAMAARAQVVVTTVGPYTRYGLPLVAACAAAGTDYADLTGEP 115
Query: 125 EFME 128
FM
Sbjct: 116 MFMR 119
|
Mycobacterium tuberculosis (taxid: 1773) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: - |
| >sp|O53176|Y2449_MYCTU Putative trans-acting enoyl reductase Rv2449c OS=Mycobacterium tuberculosis GN=Rv2449c PE=1 SV=3 | Back alignment and function description |
|---|
Score = 82.8 bits (203), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 71/124 (57%), Gaps = 6/124 (4%)
Query: 5 SQIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS 64
+ P FD+++ GA+GF GK + + +ALAGR+ RV A++ A
Sbjct: 2 TATPREFDIVLYGATGFVGKLTAEYLAR-----AGGDARIALAGRSTQRV-LAVREALGE 55
Query: 65 HSLSIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEP 124
+ + PILTAD + P +L + ++ ++++ VGPY +G P+ AAC +G DY D++GEP
Sbjct: 56 SAQTWPILTADASLPSTLQAMAARAQVVVTTVGPYTRYGLPLVAACAAAGTDYADLTGEP 115
Query: 125 EFME 128
FM
Sbjct: 116 MFMR 119
|
Mycobacterium tuberculosis (taxid: 1773) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: - |
| >sp|Q9CD87|TAER_MYCLE Trans-acting enoyl reductase OS=Mycobacterium leprae (strain TN) GN=ML0129 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 67/116 (57%), Gaps = 6/116 (5%)
Query: 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIP 70
FD+++ GA+GF+GK + E L L S +ALAGR+ R++ P ++ P
Sbjct: 8 FDIVLYGATGFSGK-LTAEHLAL----SESTARIALAGRSSERLRNVRALLGP-NAQDWP 61
Query: 71 ILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEF 126
++ AD + P +L + + +++L VGPY +G P+ AAC +G DY D++GE F
Sbjct: 62 LIVADASQPSTLEAMAGRAQVVLTTVGPYTRYGLPLVAACARTGTDYADLTGELMF 117
|
Involved in the reduction of the double bond between C-4 and C-5 during phthiocerol dimycocerosates (DIM A) and glycosylated phenolphthiocerol dimycocerosates (PGL) biosynthesis. Mycobacterium leprae (taxid: 1769) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: - |
| >sp|P95139|TAER_MYCTU Trans-acting enoyl reductase OS=Mycobacterium tuberculosis GN=Rv2953 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 75.1 bits (183), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 64/116 (55%), Gaps = 6/116 (5%)
Query: 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIP 70
FD+++ GA+GF+GK S +ALAGR+ R++ P ++ P
Sbjct: 8 FDIVLYGATGFSGKLTAEHLAH-----SGSTARIALAGRSSERLRGVRMMLGP-NAADWP 61
Query: 71 ILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEF 126
++ AD + P +L + ++ +++L VGPY +G P+ AAC +G DY D++GE F
Sbjct: 62 LILADASQPLTLEAMAARAQVVLTTVGPYTRYGLPLVAACAKAGTDYADLTGELMF 117
|
Involved in the reduction of the double bond between C-4 and C-5 during phthiocerol dimycocerosates (DIM A) and glycosylated phenolphthiocerol dimycocerosates (PGL) biosynthesis. Mycobacterium tuberculosis (taxid: 1773) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 420 | ||||||
| 224077724 | 458 | predicted protein [Populus trichocarpa] | 0.980 | 0.899 | 0.683 | 1e-175 | |
| 297801672 | 453 | hypothetical protein ARALYDRAFT_494045 [ | 0.969 | 0.898 | 0.683 | 1e-171 | |
| 255584329 | 457 | conserved hypothetical protein [Ricinus | 1.0 | 0.919 | 0.666 | 1e-170 | |
| 21536519 | 453 | unknown [Arabidopsis thaliana] | 0.969 | 0.898 | 0.679 | 1e-170 | |
| 18421863 | 454 | Saccharopine dehydrogenase [Arabidopsis | 0.969 | 0.896 | 0.68 | 1e-169 | |
| 225452928 | 451 | PREDICTED: probable mitochondrial saccha | 0.990 | 0.922 | 0.696 | 1e-168 | |
| 356523590 | 451 | PREDICTED: probable mitochondrial saccha | 0.971 | 0.904 | 0.678 | 1e-165 | |
| 357502067 | 450 | hypothetical protein MTR_7g011890 [Medic | 0.971 | 0.906 | 0.682 | 1e-165 | |
| 449437814 | 442 | PREDICTED: probable mitochondrial saccha | 0.961 | 0.914 | 0.652 | 1e-153 | |
| 356551032 | 444 | PREDICTED: probable mitochondrial saccha | 0.957 | 0.905 | 0.609 | 1e-146 |
| >gi|224077724|ref|XP_002305380.1| predicted protein [Populus trichocarpa] gi|222848344|gb|EEE85891.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 620 bits (1599), Expect = e-175, Method: Compositional matrix adjust.
Identities = 305/446 (68%), Positives = 353/446 (79%), Gaps = 34/446 (7%)
Query: 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSL 67
P L+D+IILGASGFTGKYVV+EALK N PSSP+KSLALAGRNPT++ Q L+WAS
Sbjct: 14 PTLYDLIILGASGFTGKYVVKEALKFLNVPSSPLKSLALAGRNPTKLAQTLKWASHPDHP 73
Query: 68 SIPI-LTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEF 126
LTADTTDP SLH LCSQ+KL+LNCVGP+RL G+PV AAC +GCDYLDI GEPEF
Sbjct: 74 PPIPILTADTTDPASLHHLCSQSKLILNCVGPFRLLGEPVVAACAETGCDYLDICGEPEF 133
Query: 127 MERME--------------------------------ARQWIPPAVPNQIEAYVSLESDK 154
MERME +R W+ PA PNQIEAY+SLES+K
Sbjct: 134 MERMEVKYHEKAMETGSLVVSACGFDSVPAELGWMFNSRHWVGPAAPNQIEAYLSLESEK 193
Query: 155 RIVGNFGTYESAVLGVANAQELQKLRRSRPRRARPVIPGPAPLRGPLVESQKRIGLWAIK 214
RIVGNFGTYESAVLGVAN ++L +LRRSRP+RARP IPGP P +GP+++ QK IGLWA+K
Sbjct: 194 RIVGNFGTYESAVLGVANVEQLVELRRSRPKRARPAIPGPFPTKGPMIDHQKEIGLWAVK 253
Query: 215 LPSADATVVRRTLSILTENPHGLPGANESPEQREKREAFWSTVKPAHFGVKLGSKSLLDI 274
LPSAD+ VVRRTL+ LTENP GLPG NESPEQ EKR+AFWSTVKPAHFGVKLGSK+LL +
Sbjct: 254 LPSADSVVVRRTLTTLTENPRGLPGLNESPEQIEKRDAFWSTVKPAHFGVKLGSKTLLGV 313
Query: 275 FRFIILGISIGLLSGLSFGRWLLLKFPSIFSLGWFRKRGPSEDEVESASFKMWFIGHGFS 334
FRFI +G+ IGLL + GRWLLLKFPS FSLGWFRK+GPS+DEV SASFKMWF+G GFS
Sbjct: 314 FRFIAVGMFIGLLGRNAIGRWLLLKFPSFFSLGWFRKKGPSDDEVRSASFKMWFVGRGFS 373
Query: 335 DSSLVSQGNAKPDMEIITRVTGPEIGYIATPIILMQCALIVLSQREILPKGGVFPPGIVF 394
D + VSQ KPDMEIITRV GPEIGY+ TPIIL+QCA I+LS R+ LPKGGVFPPGIVF
Sbjct: 374 DMN-VSQDKKKPDMEIITRVVGPEIGYLTTPIILVQCARILLSHRDNLPKGGVFPPGIVF 432
Query: 395 GATELQQRLQENGISFDVISKSSLPA 420
G T+LQ++L++NGISFD+ISK S+ A
Sbjct: 433 GPTDLQEQLEQNGISFDLISKKSILA 458
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297801672|ref|XP_002868720.1| hypothetical protein ARALYDRAFT_494045 [Arabidopsis lyrata subsp. lyrata] gi|297314556|gb|EFH44979.1| hypothetical protein ARALYDRAFT_494045 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 606 bits (1562), Expect = e-171, Method: Compositional matrix adjust.
Identities = 307/449 (68%), Positives = 364/449 (81%), Gaps = 42/449 (9%)
Query: 5 SQIPE-LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWAS- 62
+Q P+ ++D++ILGASG+TGKYVVREALK PSSP+KSLALAGRNPTR+ Q+L+WA+
Sbjct: 4 TQKPDPVYDIVILGASGYTGKYVVREALKFLQTPSSPLKSLALAGRNPTRLTQSLEWAAR 63
Query: 63 ----PSHSLSIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYL 118
PS S+ ILTADT+DP SL RLC+QTKL+LNCVGP+R+HGDPV +AC SGCDYL
Sbjct: 64 PNPPPS---SVAILTADTSDPDSLRRLCTQTKLILNCVGPFRIHGDPVVSACADSGCDYL 120
Query: 119 DISGEPEFMERMEA--------------------------------RQWIPPAVPNQIEA 146
DISGEPEFMERMEA +QW+ P+VPNQIEA
Sbjct: 121 DISGEPEFMERMEANYHERAEETGSLIVSACGFDSIPAELGLLFNAKQWVSPSVPNQIEA 180
Query: 147 YVSLESDKRIVGNFGTYESAVLGVANAQELQKLRRSRPRRARPVIPGPAPLRGPLVESQK 206
Y+SLESDK+I GNFGTYESAVLGVANA++L++LRRSRPRR RP I GP P +GP +E+QK
Sbjct: 181 YLSLESDKKIAGNFGTYESAVLGVANAEKLKELRRSRPRRPRPSICGP-PAKGPTLENQK 239
Query: 207 RIGLWAIKLPSADATVVRRTLSILTENPHGLPGANESPEQREKREAFWSTVKPAHFGVKL 266
IGLWA+KLPSADA VVRRTL+ LTE PHGLPG NESPEQ +KREAFWS++KPAHFGVK+
Sbjct: 240 TIGLWALKLPSADAVVVRRTLTTLTEKPHGLPGLNESPEQIQKREAFWSSIKPAHFGVKI 299
Query: 267 GSKSLLDIFRFIILGISIGLLSGLSFGRWLLLKFPSIFSLGWFRKRGPSEDEVESASFKM 326
SKSL IFR++ LG+S+GLLS SFGRWLLLKFPS+FSLGWF+K+GPSE+EVESA+FKM
Sbjct: 300 TSKSLFGIFRYVTLGVSLGLLSKFSFGRWLLLKFPSVFSLGWFQKKGPSEEEVESATFKM 359
Query: 327 WFIGHGFSDSSLVSQGNAKPDMEIITRVTGPEIGYIATPIILMQCALIVLSQREILPKGG 386
WFIG G+S+ SL SQG KPD+EIITR++GPEIGYI TPI L+QC LIVL QRE L KGG
Sbjct: 360 WFIGRGYSEESLASQGETKPDLEIITRISGPEIGYITTPITLVQCGLIVLGQRESLVKGG 419
Query: 387 VFPPGIVFGATELQQRLQENGISFDVISK 415
VF PGIVFG+T++QQRL+ENGISF+VISK
Sbjct: 420 VFTPGIVFGSTDIQQRLEENGISFEVISK 448
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255584329|ref|XP_002532900.1| conserved hypothetical protein [Ricinus communis] gi|223527334|gb|EEF29480.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 605 bits (1560), Expect = e-170, Method: Compositional matrix adjust.
Identities = 302/453 (66%), Positives = 356/453 (78%), Gaps = 33/453 (7%)
Query: 1 MQAQSQIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQW 60
M+ S+ +D+IILGASGFTGKYV++EALK N SSP+K+LALAGRNPTR+ Q+L W
Sbjct: 1 MENLSEFHPPYDLIILGASGFTGKYVIKEALKFLNTSSSPLKTLALAGRNPTRLTQSLNW 60
Query: 61 AS-PSHSLSIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLD 119
A+ P+ SIPI+TADTTDP S+ LC+QTKL+L+CVGP+RLH + V AAC +GCDYLD
Sbjct: 61 AAHPNPPPSIPIITADTTDPASIRHLCTQTKLILSCVGPFRLHSESVVAACADTGCDYLD 120
Query: 120 ISGEPEFMERME--------------------------------ARQWIPPAVPNQIEAY 147
I GEPEFMERME +RQW+ P+ PNQIEAY
Sbjct: 121 ICGEPEFMERMELKYHEKAMENGSLVVSACGFDSVPAEIGWMFNSRQWVAPSEPNQIEAY 180
Query: 148 VSLESDKRIVGNFGTYESAVLGVANAQELQKLRRSRPRRARPVIPGPAPLRGPLVESQKR 207
+SLES+KRIVGNFGTYESAVLGVAN +LQ+LR+SR +RARPVIPGP P +GP+++ QK
Sbjct: 181 LSLESEKRIVGNFGTYESAVLGVANVDKLQELRQSRSKRARPVIPGPFPPKGPMIDHQKE 240
Query: 208 IGLWAIKLPSADATVVRRTLSILTENPHGLPGANESPEQREKREAFWSTVKPAHFGVKLG 267
IGLWA+KLPSAD+ VVRRTLS LTENP GLPG +ES EQ EKRE FWS VKPAHFGVKL
Sbjct: 241 IGLWAVKLPSADSVVVRRTLSTLTENPRGLPGVDESAEQIEKREEFWSAVKPAHFGVKLS 300
Query: 268 SKSLLDIFRFIILGISIGLLSGLSFGRWLLLKFPSIFSLGWFRKRGPSEDEVESASFKMW 327
SK++L IFR I +G+ IGLL S GRWLLLKFPS+FSLGWFRK+GPSEDEV SA+FKMW
Sbjct: 301 SKTILGIFRSITVGMFIGLLGRNSIGRWLLLKFPSVFSLGWFRKKGPSEDEVRSATFKMW 360
Query: 328 FIGHGFSDSSLVSQGNAKPDMEIITRVTGPEIGYIATPIILMQCALIVLSQREILPKGGV 387
F+G GFSD + VSQ N KPDMEI+TRV GPEIGY+ TPIIL+QCALI+LS+R LPKGGV
Sbjct: 361 FVGRGFSDVNQVSQANMKPDMEIVTRVMGPEIGYLTTPIILVQCALILLSERNNLPKGGV 420
Query: 388 FPPGIVFGATELQQRLQENGISFDVISKSSLPA 420
FPPGIVFG T+LQ+RLQ NGISFD ISK +LP+
Sbjct: 421 FPPGIVFGPTDLQERLQRNGISFDFISKRALPS 453
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|21536519|gb|AAM60851.1| unknown [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 605 bits (1559), Expect = e-170, Method: Compositional matrix adjust.
Identities = 305/449 (67%), Positives = 364/449 (81%), Gaps = 42/449 (9%)
Query: 5 SQIPE-LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWAS- 62
+Q P+ ++D++ILGASGFTGKYVVREALK PSSP+KSLALAGRNPTR+ Q+L+WA+
Sbjct: 4 TQKPDPVYDIVILGASGFTGKYVVREALKFLQTPSSPLKSLALAGRNPTRLTQSLEWAAR 63
Query: 63 ----PSHSLSIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYL 118
PS S+ ILTADT+DP SL RLC+QTKL+LNCVGP+R+HGDPV +AC SGCDYL
Sbjct: 64 PNPPPS---SVAILTADTSDPDSLRRLCTQTKLILNCVGPFRIHGDPVVSACADSGCDYL 120
Query: 119 DISGEPEFMERMEAR--------------------------------QWIPPAVPNQIEA 146
DISGEPEFMERMEA+ QW+ P+VPNQIEA
Sbjct: 121 DISGEPEFMERMEAKYHDRAEETGSLIVSACGFDSIPAELGLLFNAKQWVSPSVPNQIEA 180
Query: 147 YVSLESDKRIVGNFGTYESAVLGVANAQELQKLRRSRPRRARPVIPGPAPLRGPLVESQK 206
Y+SLESDK+I GNFGTYESAVLGVANA++L++LRRSRPRR RP I GP P +GP +E+QK
Sbjct: 181 YLSLESDKKIAGNFGTYESAVLGVANAEKLKELRRSRPRRPRPTICGP-PAKGPTLENQK 239
Query: 207 RIGLWAIKLPSADATVVRRTLSILTENPHGLPGANESPEQREKREAFWSTVKPAHFGVKL 266
IGLWA+KLPSADA VVRRTL+ LTE PHGLPG NESPEQ +KREAFWS++KPAHFGVK+
Sbjct: 240 TIGLWALKLPSADAVVVRRTLTTLTEKPHGLPGINESPEQIQKREAFWSSIKPAHFGVKI 299
Query: 267 GSKSLLDIFRFIILGISIGLLSGLSFGRWLLLKFPSIFSLGWFRKRGPSEDEVESASFKM 326
SKSL IFR++ LG+S+GLLS SFGRWLLLKFPS+FSLGWF+K+GPSE+EVESA+FKM
Sbjct: 300 TSKSLFGIFRYVTLGVSLGLLSKFSFGRWLLLKFPSVFSLGWFQKKGPSEEEVESATFKM 359
Query: 327 WFIGHGFSDSSLVSQGNAKPDMEIITRVTGPEIGYIATPIILMQCALIVLSQREILPKGG 386
WFIG G+S+ SL SQG KPD+EIITR++GPEIGYI TPI L+QC LIVL QRE L KGG
Sbjct: 360 WFIGRGYSEESLASQGETKPDLEIITRISGPEIGYITTPITLLQCGLIVLGQRESLVKGG 419
Query: 387 VFPPGIVFGATELQQRLQENGISFDVISK 415
V+ PGIVFG+T++QQRL++NGISF++ISK
Sbjct: 420 VYTPGIVFGSTDIQQRLEDNGISFELISK 448
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|18421863|ref|NP_568564.1| Saccharopine dehydrogenase [Arabidopsis thaliana] gi|90173749|sp|Q8LGI2.2|SCPDL_ARATH RecName: Full=Probable mitochondrial saccharopine dehydrogenase-like oxidoreductase At5g39410; Short=SDH gi|4099092|gb|AAD09232.1| unknown [Arabidopsis thaliana] gi|10177688|dbj|BAB11014.1| unnamed protein product [Arabidopsis thaliana] gi|115646780|gb|ABJ17115.1| At5g39410 [Arabidopsis thaliana] gi|332007047|gb|AED94430.1| Saccharopine dehydrogenase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 600 bits (1548), Expect = e-169, Method: Compositional matrix adjust.
Identities = 306/450 (68%), Positives = 364/450 (80%), Gaps = 43/450 (9%)
Query: 5 SQIPE-LFDVIILGASGFTGKYVVREALKLFNFPSS-PIKSLALAGRNPTRVKQALQWAS 62
+Q PE ++D++ILGASGFTGKYVVREALK PSS P+KSLALAGRNPTR+ Q+L+WA+
Sbjct: 4 TQKPEPVYDMVILGASGFTGKYVVREALKFLQTPSSSPLKSLALAGRNPTRLTQSLEWAA 63
Query: 63 -----PSHSLSIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDY 117
PS S+ ILTADT+DP SL RLC+QTKL+LNCVGP+R+HGDPV +AC SGCDY
Sbjct: 64 RPNPPPS---SVAILTADTSDPDSLRRLCTQTKLILNCVGPFRIHGDPVVSACADSGCDY 120
Query: 118 LDISGEPEFMERMEA--------------------------------RQWIPPAVPNQIE 145
LDISGEPEFMERMEA +QW+ P+VPNQIE
Sbjct: 121 LDISGEPEFMERMEANYHDRAEETGSLIVSACGFDSIPAELGLLFNAKQWVSPSVPNQIE 180
Query: 146 AYVSLESDKRIVGNFGTYESAVLGVANAQELQKLRRSRPRRARPVIPGPAPLRGPLVESQ 205
AY+SLESDK+I GNFGTYESAVLGVANA++L++LRRSRPRR RP I GP P +GP +E+Q
Sbjct: 181 AYLSLESDKKIAGNFGTYESAVLGVANAEKLKELRRSRPRRPRPTICGP-PAKGPTLENQ 239
Query: 206 KRIGLWAIKLPSADATVVRRTLSILTENPHGLPGANESPEQREKREAFWSTVKPAHFGVK 265
K IGLWA+KLPSADA VVRRTL+ LTE PHGLPG NESPEQ +KREAFWS++KPAHFGVK
Sbjct: 240 KTIGLWALKLPSADAVVVRRTLTTLTEKPHGLPGINESPEQIQKREAFWSSIKPAHFGVK 299
Query: 266 LGSKSLLDIFRFIILGISIGLLSGLSFGRWLLLKFPSIFSLGWFRKRGPSEDEVESASFK 325
+ SKSL IFR++ LG+S+GLLS SFGRWLLLKFPS+FSLGWF+K+GPSE+EVESA+FK
Sbjct: 300 ITSKSLFGIFRYVTLGVSLGLLSKFSFGRWLLLKFPSVFSLGWFQKKGPSEEEVESATFK 359
Query: 326 MWFIGHGFSDSSLVSQGNAKPDMEIITRVTGPEIGYIATPIILMQCALIVLSQREILPKG 385
MWFIG G+S+ SL SQG KPD+EIITR++GPEIGYI TPI L+QC LIVL QRE L KG
Sbjct: 360 MWFIGRGYSEESLASQGETKPDLEIITRISGPEIGYITTPITLVQCGLIVLGQRESLVKG 419
Query: 386 GVFPPGIVFGATELQQRLQENGISFDVISK 415
GV+ PGIVFG+T++QQRL++NGISF++ISK
Sbjct: 420 GVYTPGIVFGSTDIQQRLEDNGISFELISK 449
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225452928|ref|XP_002284146.1| PREDICTED: probable mitochondrial saccharopine dehydrogenase At5g39410-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 597 bits (1540), Expect = e-168, Method: Compositional matrix adjust.
Identities = 314/451 (69%), Positives = 366/451 (81%), Gaps = 35/451 (7%)
Query: 1 MQAQSQIPEL-FDVIILGASGFTGKYVVREALKLFNFPSS-PIKSLALAGRNPTRVKQAL 58
M+ + Q P++ +D+IILGASGFTGKYVVREALK F+ SS P+K+LALAGRNP+++ QAL
Sbjct: 1 MEGEEQSPKIIYDIIILGASGFTGKYVVREALKFFDASSSSPLKTLALAGRNPSKLAQAL 60
Query: 59 QWAS-PSHSLSIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDY 117
+WA+ P+ +IPILTADTTDPPSL RLCSQ +L+LNCVGP+RL+G+PV AACV SGCDY
Sbjct: 61 EWAAHPNPPPAIPILTADTTDPPSLRRLCSQARLILNCVGPFRLYGEPVVAACVESGCDY 120
Query: 118 LDISGEPEFMERME--------------------------------ARQWIPPAVPNQIE 145
LDI GEPEFMERME +RQW+ PA PN++E
Sbjct: 121 LDICGEPEFMERMEVAYHEKASEKGSLVVSACGFDSVPAELGLMFNSRQWVSPAAPNRVE 180
Query: 146 AYVSLESDKRIVGNFGTYESAVLGVANAQELQKLRRSRPRRARPVIPGPAPLRGPLVESQ 205
AYVSLES+KR+VGN GTYESAVLGVANA +LQ+ RRSRPRRARPVIPGP P +GP +E Q
Sbjct: 181 AYVSLESEKRVVGNMGTYESAVLGVANAGKLQEFRRSRPRRARPVIPGPPPPKGPTIEHQ 240
Query: 206 KRIGLWAIKLPSADATVVRRTLSILTENPHGLPGANESPEQREKREAFWSTVKPAHFGVK 265
K+IG+WA+KLPSAD+ VVRRTLSILTENP GLPG NES EQ K+EAFWSTVKPAHFGVK
Sbjct: 241 KQIGVWAVKLPSADSIVVRRTLSILTENPRGLPGVNESSEQIAKKEAFWSTVKPAHFGVK 300
Query: 266 LGSKSLLDIFRFIILGISIGLLSGLSFGRWLLLKFPSIFSLGWFRKRGPSEDEVESASFK 325
+ SKSLL IFR I +GI IG+ +FGRWLLLKFPS+FSLGWFRK+GPSEDEV SASFK
Sbjct: 301 ISSKSLLGIFRIITVGIFIGVFGKTAFGRWLLLKFPSVFSLGWFRKKGPSEDEVRSASFK 360
Query: 326 MWFIGHGFSDSSLVSQGNAKPDMEIITRVTGPEIGYIATPIILMQCALIVLSQREILPKG 385
MWF+GHGFSD L+S+GN KPD EIITRV GPEIGY+ TPIIL+QC LIVLSQR+ LPKG
Sbjct: 361 MWFVGHGFSDCRLLSEGNMKPDSEIITRVMGPEIGYLTTPIILLQCTLIVLSQRDNLPKG 420
Query: 386 GVFPPGIVFGATELQQRLQENGISFDVISKS 416
GVFPPGIVFG T+LQQRLQENGISFDV+ ++
Sbjct: 421 GVFPPGIVFGHTDLQQRLQENGISFDVVLRN 451
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356523590|ref|XP_003530420.1| PREDICTED: probable mitochondrial saccharopine dehydrogenase At5g39410-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust.
Identities = 299/441 (67%), Positives = 353/441 (80%), Gaps = 33/441 (7%)
Query: 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWAS-PSHSLSI 69
FD+IILGASGFTGKYV+REALK N PSSP+KS+A+AGR+P ++ QALQWAS P+ S+
Sbjct: 10 FDLIILGASGFTGKYVLREALKFLNTPSSPLKSIAIAGRSPQKLTQALQWASRPNPPPSL 69
Query: 70 PILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMER 129
PILTADT DP SL LC++T LLLNCVGP+RLHG+PV AAC +GCDYLDISGEPEFMER
Sbjct: 70 PILTADTADPSSLRSLCARTGLLLNCVGPFRLHGEPVVAACAAAGCDYLDISGEPEFMER 129
Query: 130 MEA--------------------------------RQWIPPAVPNQIEAYVSLESDKRIV 157
+EA RQW+ PA PN++EAYV+LES+KRIV
Sbjct: 130 VEAAHHERAVETGALVVSACGFDSVPAELGVMFNSRQWMGPAAPNRVEAYVALESEKRIV 189
Query: 158 GNFGTYESAVLGVANAQELQKLRRSRPRRARPVIPGPAPLRGPLVESQKRIGLWAIKLPS 217
GNF TYESAVLGVANA +LQ+LRRSRPR+ RP IPGP +G +E+ K+IGLWA+KLPS
Sbjct: 190 GNFATYESAVLGVANAHQLQQLRRSRPRKPRPQIPGPPTSKGETIENNKKIGLWAVKLPS 249
Query: 218 ADATVVRRTLSILTENPHGLPGANESPEQREKREAFWSTVKPAHFGVKLGSKSLLDIFRF 277
AD+ VVRRTL ILTEN HGLPG NES E EKREAFWS+VKPAHFGVK+GSKS L I R
Sbjct: 250 ADSIVVRRTLGILTENLHGLPGLNESAETVEKREAFWSSVKPAHFGVKIGSKSFLGILRI 309
Query: 278 IILGISIGLLSGLSFGRWLLLKFPSIFSLGWFRKRGPSEDEVESASFKMWFIGHGFSDSS 337
I++G+ IGL + FGR LLLKFP IFSLGWFRK GPSE+EVESASFKMWF+GHG+SD S
Sbjct: 310 IMVGVFIGLFGSIGFGRQLLLKFPEIFSLGWFRKNGPSEEEVESASFKMWFVGHGYSDGS 369
Query: 338 LVSQGNAKPDMEIITRVTGPEIGYIATPIILMQCALIVLSQREILPKGGVFPPGIVFGAT 397
+ SQGN KPDMEI+TRV GPE+GY+ TPIIL+QCAL++L QR+ LPKGGV+PPGI+FG T
Sbjct: 370 IASQGNTKPDMEIVTRVMGPEVGYLTTPIILIQCALVLLCQRDNLPKGGVYPPGIIFGPT 429
Query: 398 ELQQRLQENGISFDVISKSSL 418
+LQ+RLQ+NGISFDVISKS++
Sbjct: 430 DLQERLQQNGISFDVISKSTI 450
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357502067|ref|XP_003621322.1| hypothetical protein MTR_7g011890 [Medicago truncatula] gi|355496337|gb|AES77540.1| hypothetical protein MTR_7g011890 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 587 bits (1513), Expect = e-165, Method: Compositional matrix adjust.
Identities = 301/441 (68%), Positives = 350/441 (79%), Gaps = 33/441 (7%)
Query: 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWAS-PSHSLSI 69
FD+IILGASGFTGKYV++EALK N SSP+ S+A+AGR+PT++ Q LQWAS P+ S+
Sbjct: 8 FDLIILGASGFTGKYVLKEALKFLNTSSSPLTSIAIAGRSPTKLAQTLQWASKPNPPPSL 67
Query: 70 PILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMER 129
PIL ADTTDP SL LCSQT L+LNCVGP+R HG+PV AAC +GCDYLDI GEPEFME+
Sbjct: 68 PILHADTTDPSSLRSLCSQTHLILNCVGPFRHHGEPVVAACTDTGCDYLDICGEPEFMEK 127
Query: 130 MEAR--------------------------------QWIPPAVPNQIEAYVSLESDKRIV 157
EA QW+ AV N++EAYV LES+KR+V
Sbjct: 128 TEASYHQRAVETGSLVVSACGFDSVPAELGLLFNSVQWVGEAVVNRVEAYVGLESEKRMV 187
Query: 158 GNFGTYESAVLGVANAQELQKLRRSRPRRARPVIPGPAPLRGPLVESQKRIGLWAIKLPS 217
GNF TYESAVLGVANA L K RRSRPRR RP IPGP+P +G +E QK+IGLWA+ LPS
Sbjct: 188 GNFATYESAVLGVANASNLHKFRRSRPRRPRPQIPGPSPTKGDTIEHQKKIGLWAVVLPS 247
Query: 218 ADATVVRRTLSILTENPHGLPGANESPEQREKREAFWSTVKPAHFGVKLGSKSLLDIFRF 277
ADA+VVRRTLS LTENPHGLPG++ESPE KREAFWS+VKPAHFGVK+GSKSLL I R
Sbjct: 248 ADASVVRRTLSTLTENPHGLPGSDESPEMVVKREAFWSSVKPAHFGVKIGSKSLLGILRI 307
Query: 278 IILGISIGLLSGLSFGRWLLLKFPSIFSLGWFRKRGPSEDEVESASFKMWFIGHGFSDSS 337
I++GI IGL SFGRWLLLKFPS+FSLGWFRK GP+E+EVESASFKMWF+G GFS+ S
Sbjct: 308 IMVGIFIGLFGNTSFGRWLLLKFPSLFSLGWFRKNGPAEEEVESASFKMWFVGRGFSNES 367
Query: 338 LVSQGNAKPDMEIITRVTGPEIGYIATPIILMQCALIVLSQREILPKGGVFPPGIVFGAT 397
L SQGN KPDMEIITR+TGPEIGY+ TPII++QCALI+LSQR+ LPKGGV+PPGIVFG T
Sbjct: 368 LASQGNTKPDMEIITRITGPEIGYVTTPIIIVQCALILLSQRKNLPKGGVYPPGIVFGHT 427
Query: 398 ELQQRLQENGISFDVISKSSL 418
+LQQRLQ+NGISFDVISKS++
Sbjct: 428 DLQQRLQQNGISFDVISKSTI 448
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449437814|ref|XP_004136685.1| PREDICTED: probable mitochondrial saccharopine dehydrogenase-like oxidoreductase At5g39410-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 287/440 (65%), Positives = 343/440 (77%), Gaps = 36/440 (8%)
Query: 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLS-I 69
+D+IILGA+GFTGKYVVREAL+ N PSSP+KS ALAGRN T++ Q LQWA+ HS I
Sbjct: 6 YDLIILGATGFTGKYVVREALRFLN-PSSPLKSFALAGRNLTKLTQTLQWAAHPHSPPPI 64
Query: 70 PILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMER 129
P+L AD DP S+HRLC+QTKL+LNCVGP+R +G+PV AACV +GCDYLDI GEPEFME+
Sbjct: 65 PLLIADIADPQSIHRLCTQTKLILNCVGPFRRYGEPVVAACVETGCDYLDICGEPEFMEK 124
Query: 130 MEA--------------------------------RQWIPPAVPNQIEAYVSLESDKRIV 157
MEA RQW+ PN+IEAY+SLES K+IV
Sbjct: 125 MEANYHERAVQSGALVVSACGFDSVPAELGLMFNSRQWVGQTAPNRIEAYLSLESSKKIV 184
Query: 158 GNFGTYESAVLGVANAQELQKLRRSRPRRARPVIPGPAPLRGPLVESQKRIGLWAIKLPS 217
GNFGT+ESAVLGVANA +L KLRRSRPR+ RP IPGP P +GP +E +K IGLW+++LPS
Sbjct: 185 GNFGTFESAVLGVANADQLLKLRRSRPRKPRPKIPGPPPPKGPTIEHKKEIGLWSVRLPS 244
Query: 218 ADATVVRRTLSILTENPHGLPGANESPEQREKREAFWSTVKPAHFGVKLGSKSLLDIFRF 277
AD+TVVRRTLS L ENP GLPG NES + E+R+ FWS+VKPAHFGVK+G+KSL+ I R
Sbjct: 245 ADSTVVRRTLSTLVENPQGLPGVNESAYEIEQRKTFWSSVKPAHFGVKIGTKSLIGILRI 304
Query: 278 IILGISIGLLSGLSFGRWLLLKFPSIFSLGWFRKRGPSEDEVESASFKMWFIGHGFSDSS 337
I +G+ IGLL S GRWLLL FPS+FSLGWFRK+GPSE+EV SASFKMWF+GHGF S+
Sbjct: 305 IAVGMFIGLLGKTSLGRWLLLTFPSVFSLGWFRKKGPSEEEVNSASFKMWFVGHGFRSSN 364
Query: 338 LVSQGNAKPDMEIITRVTGPEIGYIATPIILMQCALIVLSQREILPKGGVFPPGIVFGAT 397
++ N +P+MEI+TRV GPEIGY+ TPIIL+QCALIVLS+RE LPKGGV PGIVFG T
Sbjct: 365 --NEANVEPEMEIVTRVMGPEIGYLTTPIILVQCALIVLSRREALPKGGVLTPGIVFGPT 422
Query: 398 ELQQRLQENGISFDVISKSS 417
+LQQRLQENGISFDVISK++
Sbjct: 423 DLQQRLQENGISFDVISKNA 442
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356551032|ref|XP_003543883.1| PREDICTED: probable mitochondrial saccharopine dehydrogenase At5g39410-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 269/441 (60%), Positives = 334/441 (75%), Gaps = 39/441 (8%)
Query: 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIP 70
FDV+ILGASGFTGK V++EALK N S+ SLA+AGR+P+++ Q L+WA+ +
Sbjct: 8 FDVVILGASGFTGKQVLKEALKFLN--SNHFTSLAIAGRDPSKLAQTLKWAAQPNPPPQI 65
Query: 71 I-LTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMER 129
L ADT DPPSL LC QT+LLLNCVGP+R HG+PV AACV GCDYLDI+GE EFMER
Sbjct: 66 PILAADTADPPSLRSLCDQTRLLLNCVGPFRRHGEPVVAACVACGCDYLDITGESEFMER 125
Query: 130 ME--------------------------------ARQWIPPAVPNQIEAYVSLESDKRIV 157
+E +RQW+ PA PN++ AY+SLESDKRIV
Sbjct: 126 VEREYHAEATKKGSLVVSACGFDSVPAEMGFLFHSRQWVGPARPNRVGAYLSLESDKRIV 185
Query: 158 GNFGTYESAVLGVANAQELQKLRRSRPRRARPVIPGPAPLRGPLVESQKRIGLWAIKLPS 217
GNFGT+ESAV+ V ++L+++ RSR R P IPGP P +G ++E QK+IGLW + LPS
Sbjct: 186 GNFGTFESAVMAV---KDLKEMERSRVTRVIPEIPGPPP-KGEIIEHQKKIGLWGVTLPS 241
Query: 218 ADATVVRRTLSILTENPHGLPGANESPEQREKREAFWSTVKPAHFGVKLGSKSLLDIFRF 277
ADAT+V RTLS LTE+PHGLPG NE+ E EKR+A+W++VKPAHFGVK+GSKSLL +F F
Sbjct: 242 ADATLVGRTLSTLTESPHGLPGLNENAEMVEKRKAYWTSVKPAHFGVKIGSKSLLHVFGF 301
Query: 278 IILGISIGLLSGLSFGRWLLLKFPSIFSLGWFRKRGPSEDEVESASFKMWFIGHGFSDSS 337
I++GI IG+L SFGRWLLLK+PSIF+ G F K GPSE+E+ SASFKMWF+GHGFS+ S
Sbjct: 302 ILIGIIIGVLGRTSFGRWLLLKYPSIFTFGGFSKNGPSEEEIASASFKMWFVGHGFSNES 361
Query: 338 LVSQGNAKPDMEIITRVTGPEIGYIATPIILMQCALIVLSQREILPKGGVFPPGIVFGAT 397
L +QGN KPDMEIITRV GPE+GY+ TPII++QCAL++ QR+ LPKGGV+ PGIVFG T
Sbjct: 362 LAAQGNTKPDMEIITRVMGPEMGYVTTPIIMVQCALVLHGQRKNLPKGGVYTPGIVFGPT 421
Query: 398 ELQQRLQENGISFDVISKSSL 418
+LQ+RLQ+NGISFDVISKSS+
Sbjct: 422 DLQERLQQNGISFDVISKSSI 442
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 420 | ||||||
| TAIR|locus:2175723 | 454 | AT5G39410 [Arabidopsis thalian | 0.857 | 0.792 | 0.549 | 2.3e-101 | |
| MGI|MGI:1924486 | 429 | Sccpdh "saccharopine dehydroge | 0.288 | 0.282 | 0.475 | 7.3e-58 | |
| UNIPROTKB|Q8NBX0 | 429 | SCCPDH "Saccharopine dehydroge | 0.288 | 0.282 | 0.467 | 8.1e-57 | |
| UNIPROTKB|F1MX05 | 429 | SCCPDH "Saccharopine dehydroge | 0.288 | 0.282 | 0.475 | 8.1e-57 | |
| RGD|1311440 | 429 | Sccpdh "saccharopine dehydroge | 0.288 | 0.282 | 0.483 | 1.7e-56 | |
| UNIPROTKB|Q6AY30 | 429 | Sccpdh "Saccharopine dehydroge | 0.288 | 0.282 | 0.483 | 1.7e-56 | |
| UNIPROTKB|F1S8P1 | 429 | SCCPDH "Uncharacterized protei | 0.288 | 0.282 | 0.467 | 7.1e-56 | |
| UNIPROTKB|Q3T067 | 429 | SCCPDH "Saccharopine dehydroge | 0.288 | 0.282 | 0.467 | 8.9e-56 | |
| ZFIN|ZDB-GENE-041010-211 | 429 | sccpdhb "saccharopine dehydrog | 0.273 | 0.268 | 0.5 | 1e-51 | |
| UNIPROTKB|F1Q2B1 | 385 | SCCPDH "Uncharacterized protei | 0.288 | 0.314 | 0.475 | 1.7e-49 |
| TAIR|locus:2175723 AT5G39410 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1005 (358.8 bits), Expect = 2.3e-101, P = 2.3e-101
Identities = 200/364 (54%), Positives = 249/364 (68%)
Query: 52 TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACV 111
T+ K L P P+++A + + + + Y + + V
Sbjct: 90 TQTKLILNCVGPFRIHGDPVVSACADSGCDYLDISGEPEFMERMEANYHDRAEETGSLIV 149
Query: 112 HSGCDYLDISGEPEFMERMEARQWIPPAVPNQIEAYVSLESDKRIVGNFGTYESAVLGVA 171
S C + I E + A+QW+ P+VPNQIEAY+SLESDK+I GNFGTYESAVLGVA
Sbjct: 150 -SACGFDSIPAELGLL--FNAKQWVSPSVPNQIEAYLSLESDKKIAGNFGTYESAVLGVA 206
Query: 172 NAQELQKLXXXXXXXXXXVIPGPAPLRGPLVESQKRIGLWAIKLPSADATVVRRTLSILT 231
NA++L++L I GP P +GP +E+QK IGLWA+KLPSADA VVRRTL+ LT
Sbjct: 207 NAEKLKELRRSRPRRPRPTICGP-PAKGPTLENQKTIGLWALKLPSADAVVVRRTLTTLT 265
Query: 232 ENPHGLPGANESPEQREKREAFWSTVKPAHFGVKLGSKSLLDXXXXXXXXXXXXXXXXXX 291
E PHGLPG NESPEQ +KREAFWS++KPAHFGVK+ SKSL
Sbjct: 266 EKPHGLPGINESPEQIQKREAFWSSIKPAHFGVKITSKSLFGIFRYVTLGVSLGLLSKFS 325
Query: 292 XXXWLLLKFPSIFSLGWFRKRGPSEDEVESASFKMWFIGHGFSDSSLVSQGNAKPDMEII 351
WLLLKFPS+FSLGWF+K+GPSE+EVESA+FKMWFIG G+S+ SL SQG KPD+EII
Sbjct: 326 FGRWLLLKFPSVFSLGWFQKKGPSEEEVESATFKMWFIGRGYSEESLASQGETKPDLEII 385
Query: 352 TRVTGPEIGYIATPIILMQCALIVLSQREILPKGGVFPPGIVFGATELQQRLQENGISFD 411
TR++GPEIGYI TPI L+QC LIVL QRE L KGGV+ PGIVFG+T++QQRL++NGISF+
Sbjct: 386 TRISGPEIGYITTPITLVQCGLIVLGQRESLVKGGVYTPGIVFGSTDIQQRLEDNGISFE 445
Query: 412 VISK 415
+ISK
Sbjct: 446 LISK 449
|
|
| MGI|MGI:1924486 Sccpdh "saccharopine dehydrogenase (putative)" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 296 (109.3 bits), Expect = 7.3e-58, Sum P(3) = 7.3e-58
Identities = 59/124 (47%), Positives = 82/124 (66%)
Query: 296 LLLKFPSIFSLGWFRKRGPSEDEVESASFKMWFIGHGFSDSSLVSQGNAKPDMEIITRVT 355
LL+KFP +FS G+F K+GP++ +++ SF M F G G+S + V + KP++ I T+V
Sbjct: 308 LLIKFPWLFSFGYFSKQGPTQKQMDETSFTMTFFGQGYSHGTCVEKN--KPNIRICTQVK 365
Query: 356 GPEIGYIATPIILMQCALIVLSQREILPKGG-VFPPGIVFGATELQQRLQENGISFDVIS 414
GPE GY+ATPI ++Q A+ LS LPKGG VF PG F T+L RL ++GI F VIS
Sbjct: 366 GPEAGYVATPIAMVQAAMTFLSDASDLPKGGGVFTPGAAFSRTKLIDRLNKHGIEFSVIS 425
Query: 415 KSSL 418
S +
Sbjct: 426 SSEV 429
|
|
| UNIPROTKB|Q8NBX0 SCCPDH "Saccharopine dehydrogenase-like oxidoreductase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 295 (108.9 bits), Expect = 8.1e-57, Sum P(3) = 8.1e-57
Identities = 58/124 (46%), Positives = 84/124 (67%)
Query: 296 LLLKFPSIFSLGWFRKRGPSEDEVESASFKMWFIGHGFSDSSLVSQGNAKPDMEIITRVT 355
LL+KFP FS G+F K+GP++ ++++ASF + F G G+S + + KP+++I T+V
Sbjct: 308 LLIKFPWFFSFGYFSKQGPTQKQIDAASFTLTFFGQGYSQGTGTDKN--KPNIKICTQVK 365
Query: 356 GPEIGYIATPIILMQCALIVLSQREILPK-GGVFPPGIVFGATELQQRLQENGISFDVIS 414
GPE GY+ATPI ++Q A+ +LS LPK GGVF PG F T+L RL ++GI F VIS
Sbjct: 366 GPEAGYVATPIAMVQAAMTLLSDASHLPKAGGVFTPGAAFSKTKLIDRLNKHGIEFSVIS 425
Query: 415 KSSL 418
S +
Sbjct: 426 SSEV 429
|
|
| UNIPROTKB|F1MX05 SCCPDH "Saccharopine dehydrogenase-like oxidoreductase" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 295 (108.9 bits), Expect = 8.1e-57, Sum P(3) = 8.1e-57
Identities = 59/124 (47%), Positives = 84/124 (67%)
Query: 296 LLLKFPSIFSLGWFRKRGPSEDEVESASFKMWFIGHGFSDSSLVSQGNAKPDMEIITRVT 355
LL+KFP +FS G+F K+GP++ +++++SF M F G GFS VS KP++ I T+V
Sbjct: 308 LLIKFPWLFSFGYFSKQGPTQKQIDASSFTMTFFGQGFSQG--VSPVKNKPNIRICTQVK 365
Query: 356 GPEIGYIATPIILMQCALIVLSQREILPK-GGVFPPGIVFGATELQQRLQENGISFDVIS 414
GPE GY++T I ++Q A+I+L+ LPK GGVF PG F T+L RL E+GI F VIS
Sbjct: 366 GPEAGYVSTSIAMVQAAMILLNDASDLPKAGGVFTPGAAFSRTKLIDRLNEHGIEFSVIS 425
Query: 415 KSSL 418
+ +
Sbjct: 426 STEV 429
|
|
| RGD|1311440 Sccpdh "saccharopine dehydrogenase (putative)" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 295 (108.9 bits), Expect = 1.7e-56, Sum P(3) = 1.7e-56
Identities = 60/124 (48%), Positives = 82/124 (66%)
Query: 296 LLLKFPSIFSLGWFRKRGPSEDEVESASFKMWFIGHGFSDSSLVSQGNAKPDMEIITRVT 355
LL+KFP +FS G+F KRGP++ +++ +SF M F G G+S VS KP++ I T+V
Sbjct: 308 LLVKFPWLFSFGYFSKRGPTQKQMDESSFTMTFFGQGYSHG--VSAEKNKPNIRICTQVK 365
Query: 356 GPEIGYIATPIILMQCALIVLSQREILPKGG-VFPPGIVFGATELQQRLQENGISFDVIS 414
GPE GY+ATPI ++Q A+ L+ LPKGG VF PG F T+L RL ++GI F VIS
Sbjct: 366 GPEAGYVATPIAMVQAAVTFLNDASDLPKGGGVFTPGAAFSRTKLIDRLNQHGIQFSVIS 425
Query: 415 KSSL 418
S +
Sbjct: 426 SSEV 429
|
|
| UNIPROTKB|Q6AY30 Sccpdh "Saccharopine dehydrogenase-like oxidoreductase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 295 (108.9 bits), Expect = 1.7e-56, Sum P(3) = 1.7e-56
Identities = 60/124 (48%), Positives = 82/124 (66%)
Query: 296 LLLKFPSIFSLGWFRKRGPSEDEVESASFKMWFIGHGFSDSSLVSQGNAKPDMEIITRVT 355
LL+KFP +FS G+F KRGP++ +++ +SF M F G G+S VS KP++ I T+V
Sbjct: 308 LLVKFPWLFSFGYFSKRGPTQKQMDESSFTMTFFGQGYSHG--VSAEKNKPNIRICTQVK 365
Query: 356 GPEIGYIATPIILMQCALIVLSQREILPKGG-VFPPGIVFGATELQQRLQENGISFDVIS 414
GPE GY+ATPI ++Q A+ L+ LPKGG VF PG F T+L RL ++GI F VIS
Sbjct: 366 GPEAGYVATPIAMVQAAVTFLNDASDLPKGGGVFTPGAAFSRTKLIDRLNQHGIQFSVIS 425
Query: 415 KSSL 418
S +
Sbjct: 426 SSEV 429
|
|
| UNIPROTKB|F1S8P1 SCCPDH "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 294 (108.6 bits), Expect = 7.1e-56, Sum P(3) = 7.1e-56
Identities = 58/124 (46%), Positives = 85/124 (68%)
Query: 296 LLLKFPSIFSLGWFRKRGPSEDEVESASFKMWFIGHGFSDSSLVSQGNAKPDMEIITRVT 355
LL+KFP +FS G+F K+GP++ +++++SF + F G G+S +S +KP++ I T+V
Sbjct: 308 LLVKFPWLFSFGYFSKQGPTQKQMDASSFTLTFFGQGYSQG--LSPDKSKPNIRICTQVK 365
Query: 356 GPEIGYIATPIILMQCALIVLSQREILPK-GGVFPPGIVFGATELQQRLQENGISFDVIS 414
GPE GY+ATPI ++Q AL +L+ LPK GGVF PG F T+L +RL + GI F VIS
Sbjct: 366 GPEAGYVATPIAMVQAALTLLNDASDLPKAGGVFTPGAAFCRTKLIERLNQRGIEFSVIS 425
Query: 415 KSSL 418
S +
Sbjct: 426 SSEV 429
|
|
| UNIPROTKB|Q3T067 SCCPDH "Saccharopine dehydrogenase-like oxidoreductase" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 287 (106.1 bits), Expect = 8.9e-56, Sum P(3) = 8.9e-56
Identities = 58/124 (46%), Positives = 83/124 (66%)
Query: 296 LLLKFPSIFSLGWFRKRGPSEDEVESASFKMWFIGHGFSDSSLVSQGNAKPDMEIITRVT 355
LL+KF +FS G+F K+GP++ +++++SF M F G GFS VS KP++ I T+V
Sbjct: 308 LLIKFTWLFSFGYFSKQGPTQKQIDASSFTMTFFGQGFSQG--VSPVKNKPNIRICTQVK 365
Query: 356 GPEIGYIATPIILMQCALIVLSQREILPK-GGVFPPGIVFGATELQQRLQENGISFDVIS 414
GPE GY++T I ++Q A+I+L+ LPK GGVF PG F T+L RL E+GI F VIS
Sbjct: 366 GPEAGYVSTSIAMVQAAMILLNDASDLPKAGGVFTPGAAFSRTKLIDRLNEHGIEFSVIS 425
Query: 415 KSSL 418
+ +
Sbjct: 426 STEV 429
|
|
| ZFIN|ZDB-GENE-041010-211 sccpdhb "saccharopine dehydrogenase b" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 280 (103.6 bits), Expect = 1.0e-51, Sum P(3) = 1.0e-51
Identities = 59/118 (50%), Positives = 76/118 (64%)
Query: 296 LLLKFPSIFSLGWFRKRGPSEDEVESASFKMWFIGHGFSDSSLVSQGNAKPDMEIITRVT 355
LL +FP FS G F K GPS+ +++ SF M F G G+S SQG KPD I T VT
Sbjct: 310 LLTQFPEFFSFGLFSKSGPSKKQMDGTSFSMRFWGEGYSSGQDPSQG--KPDSTISTEVT 367
Query: 356 GPEIGYIATPIILMQCALIVLSQREILP-KGGVFPPGIVFGATELQQRLQENGISFDV 412
GPE GYIATPI ++Q A+ +L++ LP KGGVF PG VF + L +RL ++GI F +
Sbjct: 368 GPEPGYIATPIAMVQAAITLLNEPHCLPNKGGVFTPGSVFARSTLIERLNKHGIQFSI 425
|
|
| UNIPROTKB|F1Q2B1 SCCPDH "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 287 (106.1 bits), Expect = 1.7e-49, Sum P(3) = 1.7e-49
Identities = 59/124 (47%), Positives = 82/124 (66%)
Query: 296 LLLKFPSIFSLGWFRKRGPSEDEVESASFKMWFIGHGFSDSSLVSQGNAKPDMEIITRVT 355
LL+KFP +FS G+F K+GP++ ++++ASF M F G G+S + N KP+M I T+V
Sbjct: 264 LLIKFPWLFSFGYFSKQGPTQKQMDAASFTMTFFGQGYSQG-FGPEKN-KPNMRICTQVK 321
Query: 356 GPEIGYIATPIILMQCALIVLSQREILPK-GGVFPPGIVFGATELQQRLQENGISFDVIS 414
GPE GY+ATPI ++Q A+ +L+ LP GGVF PG F T+L RL + GI F VIS
Sbjct: 322 GPEAGYVATPIAMVQAAMTLLNDTSDLPNTGGVFTPGAAFCRTKLIDRLNQRGIEFSVIS 381
Query: 415 KSSL 418
S +
Sbjct: 382 SSEV 385
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q3T067 | SCPDL_BOVIN | 1, ., -, ., -, ., - | 0.3140 | 0.9071 | 0.8881 | yes | no |
| Q6AY30 | SCPDL_RAT | 1, ., -, ., -, ., - | 0.3228 | 0.9142 | 0.8951 | yes | no |
| Q8NBX0 | SCPDL_HUMAN | 1, ., -, ., -, ., - | 0.3385 | 0.9142 | 0.8951 | yes | no |
| Q5R5C9 | SCPDL_PONAB | 1, ., -, ., -, ., - | 0.3318 | 0.9142 | 0.8951 | yes | no |
| Q8R127 | SCPDL_MOUSE | 1, ., -, ., -, ., - | 0.3318 | 0.9142 | 0.8951 | yes | no |
| Q8LGI2 | SCPDL_ARATH | 1, ., -, ., -, ., - | 0.68 | 0.9690 | 0.8964 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| eugene3.00041070 | hypothetical protein (458 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 420 | |||
| COG3268 | 382 | COG3268, COG3268, Uncharacterized conserved protei | 9e-30 | |
| pfam03435 | 380 | pfam03435, Saccharop_dh, Saccharopine dehydrogenas | 1e-10 | |
| COG1748 | 389 | COG1748, LYS9, Saccharopine dehydrogenase and rela | 1e-06 |
| >gnl|CDD|225807 COG3268, COG3268, Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Score = 118 bits (297), Expect = 9e-30
Identities = 92/438 (21%), Positives = 152/438 (34%), Gaps = 103/438 (23%)
Query: 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIP 70
+D+II GA+G+ G V + ALAGR+ ++ P +
Sbjct: 7 YDIIIYGATGYAGGLVAEYLA-------REGLTAALAGRSSAKLDALRASLGPEAA---- 55
Query: 71 ILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERM 130
P +L + S+T+++LNCVGPY +G+P+ AAC +G DY DI+GE F E
Sbjct: 56 --VFPLGVPAALEAMASRTQVVLNCVGPYTRYGEPLVAACAAAGTDYADITGEIMFFENS 113
Query: 131 ------EARQ---WIPPA-----VPNQIEAYV-----------SLESDKRIVGNFGTYES 165
+A I P +P+ + Y L + +G+F
Sbjct: 114 IDLYHAQAADAGARIIPGCGFDSIPSDLGVYALLKQALPDGTEELIATHLALGSFTGSGI 173
Query: 166 AVLGVANAQELQKLRRSRP--RRARPVIPGPAPLRGPLVESQKRIGL-------WAIKLP 216
+ A + E P R V RG ++ R G W
Sbjct: 174 SGGTAATSVEGLATAGKDPEAGRLLRVPYALKKRRGAEIDFPSRRGRRLAPTLPWGFVAA 233
Query: 217 SADATVVRRTLSILTENPHGLPGANESPEQREKREAFWSTVKPAHFGVKLGSKSLLDIF- 275
+ + T+V R+ ++ W P G +LL +
Sbjct: 234 AFNTTIVPRSNALE----------------------VWIYAAPVLALAGRGIGALLPLLG 271
Query: 276 -RFIILGISIGLLSGLSFGRWLLLKFPSIFSLGWFRKRGPSEDEVESASFKMWFIGHGFS 334
++ + R L+L+ GP+E+ + +
Sbjct: 272 SAYVRDLL-----------RGLVLRVVPK------PGTGPTEEAQARGRYTIEGET---- 310
Query: 335 DSSLVSQGNAKPDMEIITRVTGPEIGYIATPIILMQCALIVLSQREIL-PKGGVFPPGIV 393
+ + R+T Y +T ++L Q AL + R+ L GGV P
Sbjct: 311 -----TTATGERYT---ARITTDNDYY-STAVLLAQAALALALDRDKLSEPGGVLTPAAA 361
Query: 394 FGATELQQRLQENGISFD 411
GA +L +RL G++F
Sbjct: 362 LGA-DLVERLPGAGVTFG 378
|
Length = 382 |
| >gnl|CDD|217556 pfam03435, Saccharop_dh, Saccharopine dehydrogenase | Back alignment and domain information |
|---|
Score = 62.7 bits (153), Expect = 1e-10
Identities = 27/121 (22%), Positives = 50/121 (41%), Gaps = 12/121 (9%)
Query: 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPIL 72
V+I+GA G G+ V + + + +A R+ + + A+P L +
Sbjct: 1 VLIIGA-GGVGQGVAPLLARHGD------LEITVADRSLEKAQAL---AAPKLGLRFIAI 50
Query: 73 TADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEA 132
D + +L L + L++N P+ L V AC+ +G Y+D S E +
Sbjct: 51 AVDADNYEALVALLKEGDLVINLAPPF-LSLT-VLKACIETGVHYVDTSYLREAQLALHE 108
Query: 133 R 133
+
Sbjct: 109 K 109
|
This family comprised of three structural domains that can not be separated in the linear sequence. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase. The saccharopine dehydrogenase can also function as a saccharopine reductase. Length = 380 |
| >gnl|CDD|224662 COG1748, LYS9, Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 49.6 bits (119), Expect = 1e-06
Identities = 37/177 (20%), Positives = 68/177 (38%), Gaps = 30/177 (16%)
Query: 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPI 71
++++GA G G V + + + + +A R+ + + + +
Sbjct: 3 KILVIGA-GGVGSVVAHKLAQ------NGDGEVTIADRSKEKCARIAE----LIGGKVEA 51
Query: 72 LTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERM- 130
L D D +L L L++N P+ + AC+ +G DY+D S E ++
Sbjct: 52 LQVDAADVDALVALIKDFDLVINAAPPF--VDLTILKACIKTGVDYVDTSYYEEPPWKLD 109
Query: 131 -EARQ----WIP-----PAVPNQIEAYVSLESDKRI------VGNFGTYESAVLGVA 171
EA++ + P + N + AY + E I VG G + LG A
Sbjct: 110 EEAKKAGITAVLGCGFDPGITNVLAAYAAKELFDEIESIDIYVGGLGEHGDNPLGYA 166
|
Length = 389 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 420 | |||
| KOG2733 | 423 | consensus Uncharacterized membrane protein [Functi | 100.0 | |
| COG3268 | 382 | Uncharacterized conserved protein [Function unknow | 100.0 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 99.75 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 99.41 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 99.41 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.29 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.25 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 99.22 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 99.16 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 99.15 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 99.14 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.1 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 99.09 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.09 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 99.08 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.08 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.07 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.07 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.06 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 99.05 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.04 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.04 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.0 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 99.0 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 98.98 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 98.96 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 98.96 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 98.95 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 98.95 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 98.93 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 98.92 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 98.92 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 98.91 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 98.91 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 98.9 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 98.9 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 98.9 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 98.9 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 98.89 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 98.89 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 98.89 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 98.88 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 98.88 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 98.87 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 98.87 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 98.87 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.87 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 98.87 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 98.86 | |
| PRK05717 | 255 | oxidoreductase; Validated | 98.86 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 98.86 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 98.84 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 98.84 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 98.84 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 98.84 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 98.84 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 98.84 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 98.83 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 98.83 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 98.83 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 98.83 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 98.82 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 98.82 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 98.82 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 98.81 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 98.81 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 98.8 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 98.8 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 98.8 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 98.8 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 98.8 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 98.79 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 98.79 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 98.79 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 98.79 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 98.78 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 98.78 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 98.78 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 98.78 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 98.78 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 98.78 | |
| KOG1014 | 312 | consensus 17 beta-hydroxysteroid dehydrogenase typ | 98.78 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 98.78 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 98.77 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 98.77 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 98.76 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 98.76 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 98.76 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 98.76 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 98.76 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 98.75 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 98.75 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 98.75 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 98.75 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.75 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 98.74 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 98.74 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 98.74 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.74 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 98.74 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 98.73 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 98.73 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 98.72 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 98.72 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 98.72 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 98.72 | |
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 98.71 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 98.71 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 98.71 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 98.71 | |
| PRK08643 | 256 | acetoin reductase; Validated | 98.71 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 98.71 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 98.71 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 98.71 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 98.71 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 98.7 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 98.7 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 98.7 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 98.7 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 98.7 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 98.7 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 98.7 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 98.69 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 98.69 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 98.69 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 98.69 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 98.69 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 98.68 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 98.68 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 98.68 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 98.67 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 98.67 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.67 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 98.67 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 98.67 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 98.67 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 98.67 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 98.66 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 98.66 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 98.66 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 98.66 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 98.66 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 98.66 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 98.66 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 98.66 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.66 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 98.65 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 98.65 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 98.65 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 98.64 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 98.64 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 98.63 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 98.63 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 98.62 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 98.62 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 98.62 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 98.62 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 98.61 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 98.61 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 98.61 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 98.61 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 98.6 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 98.6 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 98.6 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.59 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 98.59 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 98.59 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 98.59 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 98.59 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.59 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 98.59 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 98.58 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 98.58 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 98.58 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 98.58 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 98.57 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 98.57 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 98.57 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 98.56 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 98.56 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.55 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 98.55 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 98.55 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 98.55 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.55 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 98.55 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.55 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 98.54 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 98.54 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 98.54 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 98.54 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 98.54 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 98.54 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 98.54 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 98.53 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 98.53 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 98.52 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 98.52 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 98.52 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 98.51 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 98.51 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 98.51 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 98.51 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 98.5 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 98.5 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 98.5 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 98.5 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 98.49 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 98.49 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 98.49 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 98.49 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 98.49 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 98.48 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 98.48 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.48 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 98.48 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 98.48 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 98.47 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 98.45 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 98.45 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 98.45 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 98.45 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 98.45 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 98.44 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 98.44 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 98.44 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 98.44 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 98.44 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 98.44 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.44 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 98.44 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 98.43 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 98.43 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 98.42 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 98.42 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.42 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.42 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 98.42 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 98.41 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 98.4 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 98.4 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 98.4 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.4 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 98.4 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.39 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 98.39 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 98.38 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 98.38 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 98.38 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.37 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 98.37 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.35 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 98.35 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.34 | |
| PLN00015 | 308 | protochlorophyllide reductase | 98.34 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 98.34 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.33 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.33 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 98.33 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 98.32 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 98.31 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 98.29 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.29 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 98.29 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 98.26 | |
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 98.24 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.24 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 98.24 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 98.22 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 98.21 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 98.21 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 98.2 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.19 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.17 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 98.17 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 98.16 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.16 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 98.11 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 98.04 | |
| PF01118 | 121 | Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi | 98.02 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 97.97 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 97.93 | |
| KOG1611 | 249 | consensus Predicted short chain-type dehydrogenase | 97.9 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 97.88 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 97.87 | |
| KOG1203 | 411 | consensus Predicted dehydrogenase [Carbohydrate tr | 97.87 | |
| KOG1478 | 341 | consensus 3-keto sterol reductase [Lipid transport | 97.84 | |
| KOG4169 | 261 | consensus 15-hydroxyprostaglandin dehydrogenase an | 97.84 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 97.84 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 97.82 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 97.8 | |
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 97.75 | |
| PRK00436 | 343 | argC N-acetyl-gamma-glutamyl-phosphate reductase; | 97.75 | |
| PLN02968 | 381 | Probable N-acetyl-gamma-glutamyl-phosphate reducta | 97.74 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 97.73 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 97.71 | |
| TIGR01850 | 346 | argC N-acetyl-gamma-glutamyl-phosphate reductase, | 97.68 | |
| KOG1210 | 331 | consensus Predicted 3-ketosphinganine reductase [S | 97.68 | |
| PRK14874 | 334 | aspartate-semialdehyde dehydrogenase; Provisional | 97.63 | |
| KOG0172 | 445 | consensus Lysine-ketoglutarate reductase/saccharop | 97.62 | |
| PRK05671 | 336 | aspartate-semialdehyde dehydrogenase; Reviewed | 97.62 | |
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 97.61 | |
| KOG1199 | 260 | consensus Short-chain alcohol dehydrogenase/3-hydr | 97.58 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 97.55 | |
| PF00056 | 141 | Ldh_1_N: lactate/malate dehydrogenase, NAD binding | 97.55 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 97.52 | |
| PLN00106 | 323 | malate dehydrogenase | 97.52 | |
| PRK12549 | 284 | shikimate 5-dehydrogenase; Reviewed | 97.43 | |
| COG0002 | 349 | ArgC Acetylglutamate semialdehyde dehydrogenase [A | 97.41 | |
| PF00899 | 135 | ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a | 97.38 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 97.36 | |
| COG0373 | 414 | HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | 97.35 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 97.35 | |
| PRK05086 | 312 | malate dehydrogenase; Provisional | 97.3 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 97.3 | |
| PLN02383 | 344 | aspartate semialdehyde dehydrogenase | 97.29 | |
| PRK06732 | 229 | phosphopantothenate--cysteine ligase; Validated | 97.29 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 97.28 | |
| TIGR01296 | 339 | asd_B aspartate-semialdehyde dehydrogenase (peptid | 97.27 | |
| PRK14027 | 283 | quinate/shikimate dehydrogenase; Provisional | 97.26 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 97.25 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 97.25 | |
| PRK08664 | 349 | aspartate-semialdehyde dehydrogenase; Reviewed | 97.24 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 97.21 | |
| PRK12749 | 288 | quinate/shikimate dehydrogenase; Reviewed | 97.21 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 97.19 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 97.19 | |
| TIGR00507 | 270 | aroE shikimate 5-dehydrogenase. This model finds p | 97.19 | |
| TIGR01809 | 282 | Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO | 97.18 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 97.18 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 97.18 | |
| cd05213 | 311 | NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain | 97.17 | |
| KOG4039 | 238 | consensus Serine/threonine kinase TIP30/CC3 [Signa | 97.17 | |
| cd00704 | 323 | MDH Malate dehydrogenase. Malate dehydrogenase (MD | 97.16 | |
| COG0169 | 283 | AroE Shikimate 5-dehydrogenase [Amino acid transpo | 97.11 | |
| PRK00048 | 257 | dihydrodipicolinate reductase; Provisional | 97.1 | |
| PF03807 | 96 | F420_oxidored: NADP oxidoreductase coenzyme F420-d | 97.1 | |
| PRK08644 | 212 | thiamine biosynthesis protein ThiF; Provisional | 97.06 | |
| cd01483 | 143 | E1_enzyme_family Superfamily of activating enzymes | 97.04 | |
| TIGR00978 | 341 | asd_EA aspartate-semialdehyde dehydrogenase (non-p | 96.99 | |
| PRK08223 | 287 | hypothetical protein; Validated | 96.97 | |
| PRK08762 | 376 | molybdopterin biosynthesis protein MoeB; Validated | 96.95 | |
| cd00757 | 228 | ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1 | 96.93 | |
| PRK11863 | 313 | N-acetyl-gamma-glutamyl-phosphate reductase; Provi | 96.93 | |
| TIGR01851 | 310 | argC_other N-acetyl-gamma-glutamyl-phosphate reduc | 96.91 | |
| cd01487 | 174 | E1_ThiF_like E1_ThiF_like. Member of superfamily o | 96.9 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 96.9 | |
| PF10727 | 127 | Rossmann-like: Rossmann-like domain; InterPro: IPR | 96.89 | |
| PF03446 | 163 | NAD_binding_2: NAD binding domain of 6-phosphogluc | 96.89 | |
| PRK13304 | 265 | L-aspartate dehydrogenase; Reviewed | 96.88 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 96.88 | |
| PRK06728 | 347 | aspartate-semialdehyde dehydrogenase; Provisional | 96.85 | |
| PRK08040 | 336 | putative semialdehyde dehydrogenase; Provisional | 96.85 | |
| PRK09620 | 229 | hypothetical protein; Provisional | 96.8 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 96.79 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 96.79 | |
| PRK15116 | 268 | sulfur acceptor protein CsdL; Provisional | 96.78 | |
| PRK05690 | 245 | molybdopterin biosynthesis protein MoeB; Provision | 96.76 | |
| PRK00066 | 315 | ldh L-lactate dehydrogenase; Reviewed | 96.76 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 96.75 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 96.73 | |
| TIGR02355 | 240 | moeB molybdopterin synthase sulfurylase MoeB. This | 96.72 | |
| TIGR01759 | 323 | MalateDH-SF1 malate dehydrogenase. This model repr | 96.68 | |
| PRK08328 | 231 | hypothetical protein; Provisional | 96.68 | |
| PRK05597 | 355 | molybdopterin biosynthesis protein MoeB; Validated | 96.65 | |
| TIGR01758 | 324 | MDH_euk_cyt malate dehydrogenase, NAD-dependent. T | 96.65 | |
| PRK07877 | 722 | hypothetical protein; Provisional | 96.64 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 96.63 | |
| cd01485 | 198 | E1-1_like Ubiquitin activating enzyme (E1), repeat | 96.61 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 96.6 | |
| PRK05600 | 370 | thiamine biosynthesis protein ThiF; Validated | 96.59 | |
| PRK07340 | 304 | ornithine cyclodeaminase; Validated | 96.58 | |
| PLN00203 | 519 | glutamyl-tRNA reductase | 96.56 | |
| PRK08618 | 325 | ornithine cyclodeaminase; Validated | 96.54 | |
| smart00859 | 122 | Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin | 96.54 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 96.53 | |
| PRK13302 | 271 | putative L-aspartate dehydrogenase; Provisional | 96.53 | |
| KOG1198 | 347 | consensus Zinc-binding oxidoreductase [Energy prod | 96.5 | |
| PRK09310 | 477 | aroDE bifunctional 3-dehydroquinate dehydratase/sh | 96.5 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 96.49 | |
| PRK08655 | 437 | prephenate dehydrogenase; Provisional | 96.47 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 96.45 | |
| PRK14851 | 679 | hypothetical protein; Provisional | 96.4 | |
| TIGR00872 | 298 | gnd_rel 6-phosphogluconate dehydrogenase (decarbox | 96.37 | |
| TIGR01915 | 219 | npdG NADPH-dependent F420 reductase. This model re | 96.36 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.36 | |
| PF02571 | 249 | CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: | 96.35 | |
| cd00755 | 231 | YgdL_like Family of activating enzymes (E1) of ubi | 96.34 | |
| PLN02520 | 529 | bifunctional 3-dehydroquinate dehydratase/shikimat | 96.33 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 96.32 | |
| cd05291 | 306 | HicDH_like L-2-hydroxyisocapronate dehydrogenases | 96.3 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 96.29 | |
| cd01492 | 197 | Aos1_SUMO Ubiquitin activating enzyme (E1) subunit | 96.28 | |
| cd00650 | 263 | LDH_MDH_like NAD-dependent, lactate dehydrogenase- | 96.21 | |
| PRK06598 | 369 | aspartate-semialdehyde dehydrogenase; Reviewed | 96.18 | |
| PRK08300 | 302 | acetaldehyde dehydrogenase; Validated | 96.16 | |
| cd01337 | 310 | MDH_glyoxysomal_mitochondrial Glyoxysomal and mito | 96.16 | |
| COG1712 | 255 | Predicted dinucleotide-utilizing enzyme [General f | 96.13 | |
| PRK08057 | 248 | cobalt-precorrin-6x reductase; Reviewed | 96.1 | |
| cd01484 | 234 | E1-2_like Ubiquitin activating enzyme (E1), repeat | 96.08 | |
| PRK07878 | 392 | molybdopterin biosynthesis-like protein MoeZ; Vali | 96.08 | |
| PRK10669 | 558 | putative cation:proton antiport protein; Provision | 96.06 | |
| PLN02602 | 350 | lactate dehydrogenase | 96.04 | |
| cd05294 | 309 | LDH-like_MDH_nadp A lactate dehydrogenases-like st | 96.04 | |
| PRK14852 | 989 | hypothetical protein; Provisional | 96.04 | |
| cd01489 | 312 | Uba2_SUMO Ubiquitin activating enzyme (E1) subunit | 96.04 | |
| COG2085 | 211 | Predicted dinucleotide-binding enzymes [General fu | 96.02 | |
| PLN00112 | 444 | malate dehydrogenase (NADP); Provisional | 95.99 | |
| PRK12490 | 299 | 6-phosphogluconate dehydrogenase-like protein; Rev | 95.96 | |
| PRK05442 | 326 | malate dehydrogenase; Provisional | 95.96 | |
| PRK07411 | 390 | hypothetical protein; Validated | 95.96 | |
| cd01338 | 322 | MDH_choloroplast_like Chloroplast-like malate dehy | 95.95 | |
| PRK12550 | 272 | shikimate 5-dehydrogenase; Reviewed | 95.92 | |
| cd05293 | 312 | LDH_1 A subgroup of L-lactate dehydrogenases. L-la | 95.86 | |
| COG1064 | 339 | AdhP Zn-dependent alcohol dehydrogenases [General | 95.85 | |
| PRK08291 | 330 | ectoine utilization protein EutC; Validated | 95.85 | |
| TIGR02992 | 326 | ectoine_eutC ectoine utilization protein EutC. Mem | 95.84 | |
| PRK04207 | 341 | glyceraldehyde-3-phosphate dehydrogenase; Provisio | 95.84 | |
| TIGR02114 | 227 | coaB_strep phosphopantothenate--cysteine ligase, s | 95.84 | |
| TIGR01505 | 291 | tartro_sem_red 2-hydroxy-3-oxopropionate reductase | 95.8 | |
| PRK03659 | 601 | glutathione-regulated potassium-efflux system prot | 95.8 | |
| TIGR00521 | 390 | coaBC_dfp phosphopantothenoylcysteine decarboxylas | 95.75 | |
| PF01210 | 157 | NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate | 95.72 | |
| PRK06153 | 393 | hypothetical protein; Provisional | 95.7 | |
| PRK09599 | 301 | 6-phosphogluconate dehydrogenase-like protein; Rev | 95.68 | |
| PRK00094 | 325 | gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr | 95.67 | |
| TIGR01757 | 387 | Malate-DH_plant malate dehydrogenase, NADP-depende | 95.66 | |
| PRK15461 | 296 | NADH-dependent gamma-hydroxybutyrate dehydrogenase | 95.62 | |
| cd05311 | 226 | NAD_bind_2_malic_enz NAD(P) binding domain of mali | 95.57 | |
| PRK05447 | 385 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; P | 95.56 | |
| PRK06223 | 307 | malate dehydrogenase; Reviewed | 95.55 | |
| PRK03562 | 621 | glutathione-regulated potassium-efflux system prot | 95.54 | |
| PF01408 | 120 | GFO_IDH_MocA: Oxidoreductase family, NAD-binding R | 95.54 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 95.53 | |
| PRK06141 | 314 | ornithine cyclodeaminase; Validated | 95.5 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 95.43 | |
| PRK11559 | 296 | garR tartronate semialdehyde reductase; Provisiona | 95.41 | |
| KOG0023 | 360 | consensus Alcohol dehydrogenase, class V [Secondar | 95.4 | |
| COG0604 | 326 | Qor NADPH:quinone reductase and related Zn-depende | 95.34 | |
| PLN02350 | 493 | phosphogluconate dehydrogenase (decarboxylating) | 95.31 | |
| PTZ00142 | 470 | 6-phosphogluconate dehydrogenase; Provisional | 95.28 | |
| TIGR02354 | 200 | thiF_fam2 thiamine biosynthesis protein ThiF, fami | 95.27 | |
| cd08259 | 332 | Zn_ADH5 Alcohol dehydrogenases of the MDR family. | 95.25 | |
| PF02670 | 129 | DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re | 95.21 | |
| cd05292 | 308 | LDH_2 A subgroup of L-lactate dehydrogenases. L-la | 95.2 | |
| PRK07634 | 245 | pyrroline-5-carboxylate reductase; Reviewed | 95.2 | |
| TIGR01772 | 312 | MDH_euk_gproteo malate dehydrogenase, NAD-dependen | 95.19 | |
| cd01075 | 200 | NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l | 95.18 | |
| PRK02472 | 447 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 95.17 | |
| PTZ00117 | 319 | malate dehydrogenase; Provisional | 95.14 | |
| cd08295 | 338 | double_bond_reductase_like Arabidopsis alkenal dou | 95.1 | |
| COG0623 | 259 | FabI Enoyl-[acyl-carrier-protein] | 95.09 | |
| COG2084 | 286 | MmsB 3-hydroxyisobutyrate dehydrogenase and relate | 95.07 | |
| TIGR03693 | 637 | ocin_ThiF_like putative thiazole-containing bacter | 94.99 | |
| PLN03154 | 348 | putative allyl alcohol dehydrogenase; Provisional | 94.97 | |
| cd01486 | 307 | Apg7 Apg7 is an E1-like protein, that activates tw | 94.97 | |
| TIGR01692 | 288 | HIBADH 3-hydroxyisobutyrate dehydrogenase. This en | 94.92 | |
| cd08293 | 345 | PTGR2 Prostaglandin reductase. Prostaglandins and | 94.92 | |
| TIGR02371 | 325 | ala_DH_arch alanine dehydrogenase, Archaeoglobus f | 94.91 | |
| TIGR01761 | 343 | thiaz-red thiazolinyl imide reductase. This reduct | 94.91 | |
| PRK09424 | 509 | pntA NAD(P) transhydrogenase subunit alpha; Provis | 94.9 | |
| TIGR00561 | 511 | pntA NAD(P) transhydrogenase, alpha subunit. In so | 94.88 | |
| PRK06129 | 308 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 94.85 | |
| COG0039 | 313 | Mdh Malate/lactate dehydrogenases [Energy producti | 94.81 | |
| TIGR00036 | 266 | dapB dihydrodipicolinate reductase. | 94.68 | |
| TIGR00873 | 467 | gnd 6-phosphogluconate dehydrogenase, decarboxylat | 94.67 | |
| PRK06476 | 258 | pyrroline-5-carboxylate reductase; Reviewed | 94.67 | |
| PRK11880 | 267 | pyrroline-5-carboxylate reductase; Reviewed | 94.67 | |
| cd05290 | 307 | LDH_3 A subgroup of L-lactate dehydrogenases. L-la | 94.63 | |
| PRK01438 | 480 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 94.6 | |
| PTZ00082 | 321 | L-lactate dehydrogenase; Provisional | 94.58 | |
| PRK14618 | 328 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 94.51 | |
| COG2099 | 257 | CobK Precorrin-6x reductase [Coenzyme metabolism] | 94.51 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 94.5 | |
| PRK06823 | 315 | ornithine cyclodeaminase; Validated | 94.5 | |
| TIGR03736 | 244 | PRTRC_ThiF PRTRC system ThiF family protein. A nov | 94.47 | |
| PRK07680 | 273 | late competence protein ComER; Validated | 94.46 | |
| TIGR02825 | 325 | B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 | 94.39 | |
| PRK07417 | 279 | arogenate dehydrogenase; Reviewed | 94.34 | |
| PRK07589 | 346 | ornithine cyclodeaminase; Validated | 94.33 | |
| PF01262 | 168 | AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal | 94.32 | |
| PRK13301 | 267 | putative L-aspartate dehydrogenase; Provisional | 94.3 | |
| PRK12491 | 272 | pyrroline-5-carboxylate reductase; Reviewed | 94.3 | |
| PRK06046 | 326 | alanine dehydrogenase; Validated | 94.3 | |
| cd05295 | 452 | MDH_like Malate dehydrogenase-like. These MDH-like | 94.28 | |
| PRK09260 | 288 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 94.28 | |
| TIGR03215 | 285 | ac_ald_DH_ac acetaldehyde dehydrogenase (acetylati | 94.26 | |
| COG0686 | 371 | Ald Alanine dehydrogenase [Amino acid transport an | 94.26 | |
| COG1004 | 414 | Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en | 94.11 | |
| COG0136 | 334 | Asd Aspartate-semialdehyde dehydrogenase [Amino ac | 94.08 | |
| cd00300 | 300 | LDH_like L-lactate dehydrogenase-like enzymes. Mem | 94.07 | |
| COG0673 | 342 | MviM Predicted dehydrogenases and related proteins | 94.06 | |
| cd05276 | 323 | p53_inducible_oxidoreductase PIG3 p53-inducible qu | 93.95 | |
| PRK15059 | 292 | tartronate semialdehyde reductase; Provisional | 93.94 | |
| PRK08293 | 287 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 93.94 | |
| TIGR01763 | 305 | MalateDH_bact malate dehydrogenase, NAD-dependent. | 93.91 | |
| PRK07502 | 307 | cyclohexadienyl dehydrogenase; Validated | 93.89 | |
| KOG1494 | 345 | consensus NAD-dependent malate dehydrogenase [Ener | 93.83 | |
| PRK13303 | 265 | L-aspartate dehydrogenase; Provisional | 93.82 | |
| PRK14192 | 283 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 93.78 |
| >KOG2733 consensus Uncharacterized membrane protein [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-86 Score=630.96 Aligned_cols=381 Identities=41% Similarity=0.702 Sum_probs=334.2
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCC---CCCCccEEEEeCCCHHHHHHHH
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS---HSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~---~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
+||+||+|||||||+.+++++.+.+. ..+++|++||||++||+++++++... +.....++.+|.+|+++|++++
T Consensus 5 ~yDvVIyGASGfTG~yivee~v~~~~---~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~ema 81 (423)
T KOG2733|consen 5 RYDVVIYGASGFTGKYIVEEAVSSQV---FEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMA 81 (423)
T ss_pred eeeEEEEccccccceeeHHHHhhhhc---ccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHH
Confidence 79999999999999999999999542 12389999999999999999988652 2233449999999999999999
Q ss_pred hccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHHHHHHHH--------------hccCCCCCcceeeee-----
Q 014694 87 SQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEA--------------RQWIPPAVPNQIEAY----- 147 (420)
Q Consensus 87 ~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~~~~~~~--------------~~~~~~~~p~~~~~~----- 147 (420)
+++.+||||+|||..+|++||+||+++|+||||+||||+|+|+|+. ..++.||+|.|+.+.
T Consensus 82 k~~~vivN~vGPyR~hGE~VVkacienG~~~vDISGEP~f~E~mq~kYhd~A~ekGVYIVsaCGfDSIPaDlGv~f~~k~ 161 (423)
T KOG2733|consen 82 KQARVIVNCVGPYRFHGEPVVKACIENGTHHVDISGEPQFMERMQLKYHDLAKEKGVYIVSACGFDSIPADLGVMFLRKN 161 (423)
T ss_pred hhhEEEEeccccceecCcHHHHHHHHcCCceeccCCCHHHHHHHHHHHHHHHHhcCeEEEeecccCCCCccceeeeehhh
Confidence 9999999999999999999999999999999999999999999998 355667888887653
Q ss_pred -----------eeecc-CCc-cccccccHHHHHHHHhcchhhHHHHhcCCCCCCCCCCCCCCCCCCccccccccCeEEee
Q 014694 148 -----------VSLES-DKR-IVGNFGTYESAVLGVANAQELQKLRRSRPRRARPVIPGPAPLRGPLVESQKRIGLWAIK 214 (420)
Q Consensus 148 -----------~~~~~-~~~-~~g~~GT~~S~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 214 (420)
+.++. +++ .+-|.|||+|+++++++.+++++||++..|..++.. .|+.++++.++..+..+.|++|
T Consensus 162 fdg~ln~VEsfl~Lh~~gp~G~sln~gTweSallg~~n~~~l~~lR~~~~p~~ip~~-~~~lkkR~~l~~~~e~~g~alp 240 (423)
T KOG2733|consen 162 FDGVLNHVESFLQLHSKGPSGYSLNTGTWESALLGVANASELKALRKSIMPQPIPNG-CPPLKKRPTLWKIKEKGGVALP 240 (423)
T ss_pred ccccHHHHHHHHhhhccCCcccccccccHHHHHHHhcChHHHHHHHhhhCCCcCccC-CCCCCCCCceeeeeeccceEee
Confidence 33443 332 345779999999999999999999999877666543 3445667777777778899999
Q ss_pred CCCCChhhhhhhhhccccCCCCCCCCCCChhHHhhhhhhhcCCCCeEEEEEEecCchhHHHHHHHHHHHHHHhhccchhh
Q 014694 215 LPSADATVVRRTLSILTENPHGLPGANESPEQREKREAFWSTVKPAHFGVKLGSKSLLDIFRFIILGISIGLLSGLSFGR 294 (420)
Q Consensus 215 f~~~d~~vV~RS~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~R 294 (420)
|+++|.+||+|||.+++.. ...+|.||+.|++++++++++.+++++.++.++++|+++|
T Consensus 241 FpgaD~SVV~RSQ~~l~~~---------------------~~~rPv~~~ay~~~~s~~~~~~~~~~~~~~~~fskf~~gR 299 (423)
T KOG2733|consen 241 FPGADKSVVRRSQYYLYES---------------------RKVRPVHMQAYITVGSRFGAIKLVFFGWILGFFSKFSFGR 299 (423)
T ss_pred cCCCchhheehHHHHHHHh---------------------ccCCceeEEEEEeeccchHHHHHHHHHHHHHHHHhhhHHH
Confidence 9999999999999887543 2567999999999999999999999999999999999999
Q ss_pred HhhhhcCcccccCccCCCCCCHhhhcccEEEEEEEEEecCCCcccc-cCCCCCCcEEEEEEecCCCcchHHHHHHHHHHH
Q 014694 295 WLLLKFPSIFSLGWFRKRGPSEDEVESASFKMWFIGHGFSDSSLVS-QGNAKPDMEIITRVTGPEIGYIATPIILMQCAL 373 (420)
Q Consensus 295 ~ll~k~p~~fs~g~~~g~GPs~~~~~~~~f~~~~~~~g~~~~~~~~-~~~~~~~~~v~~~~~g~dpgY~~Ta~~l~eaAl 373 (420)
|||+|||.+||+|+|+.+|||++||++..|+++|+|+||.+.+..+ +++.++++++.++++||||||.+|++++++|||
T Consensus 300 ~lLlkyP~~fSfg~fsksGPSe~qm~~AtFt~~f~g~Gy~~~~~l~~~~~~~~~~kl~~~~sGPd~gYiaT~i~vlsaal 379 (423)
T KOG2733|consen 300 RLLLKYPDFFSFGMFSKSGPSEEQMEEATFTMWFFGYGYKEGEPLDKQHEQKTDKKLLVRCSGPDPGYIATSICVLSAAL 379 (423)
T ss_pred HHHHhCcccccccccccCCCCHHHHhhcEEEEEEEEeccCCCCccccccccccccEEEEEecCCCcchhhccHHHHHHHH
Confidence 9999999999999999999999999999999999999998755433 334456799999999999999999999999999
Q ss_pred HHhhccCCCC-CCccccccccccCcchHHHHhhCCcEEEEeeC
Q 014694 374 IVLSQREILP-KGGVFPPGIVFGATELQQRLQENGISFDVISK 415 (420)
Q Consensus 374 ~Ll~~~~~l~-~GGvlTPa~afg~~~li~RL~~~G~~f~v~~~ 415 (420)
+||.++++|| .|||||||+|||+|+++|||+++||+||++++
T Consensus 380 t~L~~~~~lpk~GGV~tPaaaF~~T~i~~~L~~~GI~Fel~s~ 422 (423)
T KOG2733|consen 380 TLLKDKDKLPKGGGVYTPAAAFGNTKIIDRLAKHGIKFELISE 422 (423)
T ss_pred HHHHHhhcCCCCCCccCchhhhcCChHHHHHHhcCceEEEEeC
Confidence 9999999999 79999999999999999999999999999864
|
|
| >COG3268 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-47 Score=363.16 Aligned_cols=335 Identities=27% Similarity=0.406 Sum_probs=246.0
Q ss_pred CCCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 014694 6 QIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 6 ~~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~ 85 (420)
.++++++++|+|||||+|.+++++|++++ .+-++++||..|+..+...|+. + +-..++-+++.++++
T Consensus 2 ~~e~e~d~iiYGAtGy~G~lvae~l~~~g-------~~~aLAgRs~~kl~~l~~~LG~----~--~~~~p~~~p~~~~~~ 68 (382)
T COG3268 2 PMEREYDIIIYGATGYAGGLVAEYLAREG-------LTAALAGRSSAKLDALRASLGP----E--AAVFPLGVPAALEAM 68 (382)
T ss_pred CCCcceeEEEEccccchhHHHHHHHHHcC-------CchhhccCCHHHHHHHHHhcCc----c--ccccCCCCHHHHHHH
Confidence 46789999999999999999999999998 5679999999999999999863 2 233345569999999
Q ss_pred HhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHHHHHHHHh--------------ccCCCCCcceeeeee---
Q 014694 86 CSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEAR--------------QWIPPAVPNQIEAYV--- 148 (420)
Q Consensus 86 ~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~~~~~~~~--------------~~~~~~~p~~~~~~~--- 148 (420)
+.+++||+||+|||..+++++++||+.+|+||+|||||+.|+|.++++ .++.|++|.|+..|-
T Consensus 69 ~~~~~VVlncvGPyt~~g~plv~aC~~~GTdY~DiTGEi~~fe~~i~~yh~~A~~~Ga~Ii~~cGFDsIPsDl~v~~l~~ 148 (382)
T COG3268 69 ASRTQVVLNCVGPYTRYGEPLVAACAAAGTDYADITGEIMFFENSIDLYHAQAADAGARIIPGCGFDSIPSDLGVYALLK 148 (382)
T ss_pred HhcceEEEeccccccccccHHHHHHHHhCCCeeeccccHHHHHHHHHHHHHHHHhcCCEEeccCCCCcCccchHHHHHHH
Confidence 999999999999999999999999999999999999999999999982 345689999984322
Q ss_pred ---------------eec--cCCccccccccHHHHHHHHhcchhhHHHHhc-CCCCCCCCCCCC--CCCCCCcccccccc
Q 014694 149 ---------------SLE--SDKRIVGNFGTYESAVLGVANAQELQKLRRS-RPRRARPVIPGP--APLRGPLVESQKRI 208 (420)
Q Consensus 149 ---------------~~~--~~~~~~g~~GT~~S~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~ 208 (420)
.+. ....+|+ ||.+|.+..+.......+-++. ..|+.+...... --|.+...+..+.+
T Consensus 149 ~~~~d~~~~~~~t~l~l~s~t~~g~S~--GTaat~~e~l~~~~~~~~~gr~~~~P~~~~~~r~~~iDf~~~rg~~~a~~~ 226 (382)
T COG3268 149 QALPDGTEELIATHLALGSFTGSGISG--GTAATSVEGLATAGKDPEAGRLLRVPYALKKRRGAEIDFPSRRGRRLAPTL 226 (382)
T ss_pred hhCcccccchhhhheeeeecccCCccc--ccHHHHHHHHHhccCCcccCceeccCceeccCCCCCCCcccCCccccCccc
Confidence 121 1223555 9999999999877654433333 245544322110 00111111112223
Q ss_pred CeEEeeC--CCCChhhhhhhhhccccCCCCCCCCCCChhHHhhhhhhhcCCCCeEEEEEEecCchhHH-HHHHHHHHHHH
Q 014694 209 GLWAIKL--PSADATVVRRTLSILTENPHGLPGANESPEQREKREAFWSTVKPAHFGVKLGSKSLLDI-FRFIILGISIG 285 (420)
Q Consensus 209 ~~~~~pf--~~~d~~vV~RS~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~y~~y~~~~~~~~~-~~~~~~~~~~~ 285 (420)
. | +| ...|+.||.||+.+.. |.+ .+..+.+ ...+...+.+.
T Consensus 227 ~-W--g~V~a~~~t~iv~rsn~l~~----------------------~~~-----------~~pv~~~a~~~~~~~~~ll 270 (382)
T COG3268 227 P-W--GFVAAAFNTTIVPRSNALEV----------------------WIY-----------AAPVLALAGRGIGALLPLL 270 (382)
T ss_pred C-c--hhhhhhhccCccccccceee----------------------eec-----------hhHHHHHHHhccchhhhhh
Confidence 3 6 55 5899999999997731 111 1111111 11111111111
Q ss_pred --HhhccchhhHhhhhc-CcccccCccCCCCCCHhhhcccEEEEEEEEEecCCCcccccCCCCCCcEEEEEEecCCCcch
Q 014694 286 --LLSGLSFGRWLLLKF-PSIFSLGWFRKRGPSEDEVESASFKMWFIGHGFSDSSLVSQGNAKPDMEIITRVTGPEIGYI 362 (420)
Q Consensus 286 --~~~~~~~~R~ll~k~-p~~fs~g~~~g~GPs~~~~~~~~f~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~g~dpgY~ 362 (420)
... --+.|+++.|+ |+ ||+||++|.++.|+++++++++...+ .+..+++..... |.
T Consensus 271 ~~~~~-~~~~r~lv~r~~~k-------~g~GPt~e~qarg~~~~~~~~~tatG------------~r~~ari~t~~~-y~ 329 (382)
T COG3268 271 GSAYV-RDLLRGLVLRVVPK-------PGTGPTEEAQARGRYTIEGETTTATG------------ERYTARITTDND-YY 329 (382)
T ss_pred hhHHH-hhhhHhhhheeccC-------CCCCCCHHHHhcCcceEEEEEEeccC------------CceeeEEecccc-hH
Confidence 111 24678888887 66 99999999999999999888876322 345678887744 99
Q ss_pred HHHHHHHHHHHHHhhccCCCC-CCccccccccccCcchHHHHhhCCcEEEEe
Q 014694 363 ATPIILMQCALIVLSQREILP-KGGVFPPGIVFGATELQQRLQENGISFDVI 413 (420)
Q Consensus 363 ~Ta~~l~eaAl~Ll~~~~~l~-~GGvlTPa~afg~~~li~RL~~~G~~f~v~ 413 (420)
.|++.++++|++++.+++++. .|||+|||++||. +||+||-.+|+.|++.
T Consensus 330 stav~~a~~~l~~ald~~~~~~~gGv~TPA~~lG~-dlv~rLp~aGv~~~~~ 380 (382)
T COG3268 330 STAVLLAQAALALALDRDKLSEPGGVLTPAAALGA-DLVERLPGAGVTFGTT 380 (382)
T ss_pred HHHHHHHHHHHHHHhcCCcccCCCcccChHHHHhH-HHHHhcccccceeecc
Confidence 999999999999999999887 8999999999997 8999999999999874
|
|
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.9e-18 Score=172.73 Aligned_cols=105 Identities=30% Similarity=0.534 Sum_probs=84.6
Q ss_pred EEEEcCCcHHHHHHHHHHHHhCCCCCCCcc-eEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccCe
Q 014694 13 VIILGASGFTGKYVVREALKLFNFPSSPIK-SLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKL 91 (420)
Q Consensus 13 IvV~GATG~~G~~va~~L~~~~~~~~~~~~-~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~dv 91 (420)
|+|+|| |++|+.++++|+++.+ . +|++++||.++++++.+++. ..+++++.+|+.|.++|.++++++|+
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~------~~~v~va~r~~~~~~~~~~~~~---~~~~~~~~~d~~~~~~l~~~~~~~dv 70 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGP------FEEVTVADRNPEKAERLAEKLL---GDRVEAVQVDVNDPESLAELLRGCDV 70 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTC------E-EEEEEESSHHHHHHHHT--T---TTTEEEEE--TTTHHHHHHHHTTSSE
T ss_pred CEEEcC-cHHHHHHHHHHhcCCC------CCcEEEEECCHHHHHHHHhhcc---ccceeEEEEecCCHHHHHHHHhcCCE
Confidence 799999 9999999999999873 4 99999999999998887642 46789999999999999999999999
Q ss_pred eEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHHHHH
Q 014694 92 LLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMER 129 (420)
Q Consensus 92 VIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~~~~ 129 (420)
||||+||+ ++.+++++|+++|+||||.+.....+.+
T Consensus 71 Vin~~gp~--~~~~v~~~~i~~g~~yvD~~~~~~~~~~ 106 (386)
T PF03435_consen 71 VINCAGPF--FGEPVARACIEAGVHYVDTSYVTEEMLA 106 (386)
T ss_dssp EEE-SSGG--GHHHHHHHHHHHT-EEEESS-HHHHHHH
T ss_pred EEECCccc--hhHHHHHHHHHhCCCeeccchhHHHHHH
Confidence 99999998 6789999999999999997663333333
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.6e-12 Score=127.09 Aligned_cols=106 Identities=22% Similarity=0.258 Sum_probs=87.3
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHH--HHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQ--ALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~--~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
..+.|+|+|||||||++|++.|+++| ++|....|++++.+. .+.++.. ...++.++++|+.|++++++++
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rG-------Y~V~gtVR~~~~~k~~~~L~~l~~-a~~~l~l~~aDL~d~~sf~~ai 76 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRG-------YTVRGTVRDPEDEKKTEHLRKLEG-AKERLKLFKADLLDEGSFDKAI 76 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCC-------CEEEEEEcCcchhhhHHHHHhccc-CcccceEEeccccccchHHHHH
Confidence 44689999999999999999999999 999999999887443 3455532 2345899999999999999999
Q ss_pred hccCeeEeccCCCCCCc---------------HHHHHHHHHcC-Cc-EEecCC
Q 014694 87 SQTKLLLNCVGPYRLHG---------------DPVAAACVHSG-CD-YLDISG 122 (420)
Q Consensus 87 ~~~dvVIn~aGp~~~~~---------------~~vv~Ac~~~g-~~-yvdisg 122 (420)
++||.|||+|.|+.... .+|++||++.. ++ .|..|.
T Consensus 77 ~gcdgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS 129 (327)
T KOG1502|consen 77 DGCDGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSS 129 (327)
T ss_pred hCCCEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEecc
Confidence 99999999999976532 78999999998 54 444443
|
|
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.6e-12 Score=130.51 Aligned_cols=107 Identities=21% Similarity=0.345 Sum_probs=93.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
++|+|+|| |++|+.+++.|+++++ .+|.+++|+.++++++.+... .+++.+++|+.|.+++.+++++.|
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~~~d------~~V~iAdRs~~~~~~i~~~~~----~~v~~~~vD~~d~~al~~li~~~d 70 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQNGD------GEVTIADRSKEKCARIAELIG----GKVEALQVDAADVDALVALIKDFD 70 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHhCCC------ceEEEEeCCHHHHHHHHhhcc----ccceeEEecccChHHHHHHHhcCC
Confidence 57999999 9999999999999984 799999999999988876542 478999999999999999999999
Q ss_pred eeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHHHHHH
Q 014694 91 LLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERM 130 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~~~~~ 130 (420)
+||||+.|+.. ..+++||+++|+||+|+|-..+...++
T Consensus 71 ~VIn~~p~~~~--~~i~ka~i~~gv~yvDts~~~~~~~~~ 108 (389)
T COG1748 71 LVINAAPPFVD--LTILKACIKTGVDYVDTSYYEEPPWKL 108 (389)
T ss_pred EEEEeCCchhh--HHHHHHHHHhCCCEEEcccCCchhhhh
Confidence 99999988764 599999999999999999555443333
|
|
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=2.6e-11 Score=120.03 Aligned_cols=98 Identities=15% Similarity=0.171 Sum_probs=81.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
|+|+|+|||||+|++++++|++++ ++|.+..|+.++...+. ..+++++.+|++|++++.++++++|
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g-------~~V~~l~R~~~~~~~l~-------~~~v~~v~~Dl~d~~~l~~al~g~d 66 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEG-------YQVRCLVRNLRKASFLK-------EWGAELVYGDLSLPETLPPSFKGVT 66 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-------CeEEEEEcChHHhhhHh-------hcCCEEEECCCCCHHHHHHHHCCCC
Confidence 579999999999999999999987 89999999977653322 1357899999999999999999999
Q ss_pred eeEeccCCCCCC-----------cHHHHHHHHHcCC-cEEecCC
Q 014694 91 LLLNCVGPYRLH-----------GDPVAAACVHSGC-DYLDISG 122 (420)
Q Consensus 91 vVIn~aGp~~~~-----------~~~vv~Ac~~~g~-~yvdisg 122 (420)
+|||+++..... ..++++||.++|+ ++|.+|+
T Consensus 67 ~Vi~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss 110 (317)
T CHL00194 67 AIIDASTSRPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSI 110 (317)
T ss_pred EEEECCCCCCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEecc
Confidence 999998743211 1689999999998 6777765
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.25 E-value=3.6e-11 Score=108.89 Aligned_cols=94 Identities=20% Similarity=0.415 Sum_probs=81.3
Q ss_pred EEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccCee
Q 014694 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKLL 92 (420)
Q Consensus 13 IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~dvV 92 (420)
|+|+||||++|+.++++|++++ ++|.+..|++++++. ..+++++.+|+.|++++.+.++++|+|
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~-------~~V~~~~R~~~~~~~---------~~~~~~~~~d~~d~~~~~~al~~~d~v 64 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRG-------HEVTALVRSPSKAED---------SPGVEIIQGDLFDPDSVKAALKGADAV 64 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTT-------SEEEEEESSGGGHHH---------CTTEEEEESCTTCHHHHHHHHTTSSEE
T ss_pred eEEECCCChHHHHHHHHHHHCC-------CEEEEEecCchhccc---------ccccccceeeehhhhhhhhhhhhcchh
Confidence 7999999999999999999998 899999999998865 147899999999999999999999999
Q ss_pred EeccCCCCCC---cHHHHHHHHHcCC-cEEecCC
Q 014694 93 LNCVGPYRLH---GDPVAAACVHSGC-DYLDISG 122 (420)
Q Consensus 93 In~aGp~~~~---~~~vv~Ac~~~g~-~yvdisg 122 (420)
|+++|+.... -.+++++|.++++ +++.+|+
T Consensus 65 i~~~~~~~~~~~~~~~~~~a~~~~~~~~~v~~s~ 98 (183)
T PF13460_consen 65 IHAAGPPPKDVDAAKNIIEAAKKAGVKRVVYLSS 98 (183)
T ss_dssp EECCHSTTTHHHHHHHHHHHHHHTTSSEEEEEEE
T ss_pred hhhhhhhcccccccccccccccccccccceeeec
Confidence 9999875432 3678888888888 5666653
|
... |
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=99.22 E-value=7e-11 Score=120.09 Aligned_cols=111 Identities=15% Similarity=0.182 Sum_probs=83.3
Q ss_pred CCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 014694 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 7 ~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
...+|+|+|+|||||+|++++++|++++. ++|.+++|+.++.+.+..........+++++.+|+.|.+.+.+++
T Consensus 11 ~~~~~~VlVTGgtGfIGs~lv~~L~~~~g------~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~ 84 (386)
T PLN02427 11 PIKPLTICMIGAGGFIGSHLCEKLMTETP------HKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLI 84 (386)
T ss_pred cccCcEEEEECCcchHHHHHHHHHHhcCC------CEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHh
Confidence 44567899999999999999999999741 689889998777654432110001236889999999999999999
Q ss_pred hccCeeEeccCCCCC-----C-----------cHHHHHHHHHcCCcEEecCCc
Q 014694 87 SQTKLLLNCVGPYRL-----H-----------GDPVAAACVHSGCDYLDISGE 123 (420)
Q Consensus 87 ~~~dvVIn~aGp~~~-----~-----------~~~vv~Ac~~~g~~yvdisge 123 (420)
+++|+|||+|+.... . ..+++++|.+.+.++|.+|..
T Consensus 85 ~~~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~~r~v~~SS~ 137 (386)
T PLN02427 85 KMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTC 137 (386)
T ss_pred hcCCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcCCEEEEEeee
Confidence 999999999984321 0 156778888777777777653
|
|
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.2e-10 Score=113.71 Aligned_cols=100 Identities=26% Similarity=0.331 Sum_probs=77.0
Q ss_pred EEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHH-HHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccCee
Q 014694 14 IILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVK-QALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKLL 92 (420)
Q Consensus 14 vV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~-~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~dvV 92 (420)
|||||+||+|++|+++|+++++ ..+|.+++|+..... ..... .....++.+|++|++++.++++++|+|
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~-----~~~Vr~~d~~~~~~~~~~~~~-----~~~~~~~~~Di~d~~~l~~a~~g~d~V 70 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGY-----IYEVRVLDRSPPPKFLKDLQK-----SGVKEYIQGDITDPESLEEALEGVDVV 70 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCC-----ceEEEEcccccccccchhhhc-----ccceeEEEeccccHHHHHHHhcCCceE
Confidence 6999999999999999999983 268888888765421 11111 122338999999999999999999999
Q ss_pred EeccCCCCCCc---------------HHHHHHHHHcCCc-EEecCCc
Q 014694 93 LNCVGPYRLHG---------------DPVAAACVHSGCD-YLDISGE 123 (420)
Q Consensus 93 In~aGp~~~~~---------------~~vv~Ac~~~g~~-yvdisge 123 (420)
||+|++....+ ++|+++|.+++++ +|.+|..
T Consensus 71 ~H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~ 117 (280)
T PF01073_consen 71 FHTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSI 117 (280)
T ss_pred EEeCccccccCcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCc
Confidence 99999754321 8899999999996 5555533
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.6e-10 Score=110.64 Aligned_cols=85 Identities=21% Similarity=0.264 Sum_probs=74.0
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
+...++|||||+.||+.+++.|++++ +++++++|++++|+++.+++......++.++.+|++|++++.++..
T Consensus 5 ~~~~~lITGASsGIG~~~A~~lA~~g-------~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~ 77 (265)
T COG0300 5 KGKTALITGASSGIGAELAKQLARRG-------YNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDE 77 (265)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCC-------CEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHH
Confidence 44579999999999999999999998 8999999999999999998863223467899999999999999875
Q ss_pred ------ccCeeEeccCCCC
Q 014694 88 ------QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (420)
.+|++|||||.-.
T Consensus 78 l~~~~~~IdvLVNNAG~g~ 96 (265)
T COG0300 78 LKERGGPIDVLVNNAGFGT 96 (265)
T ss_pred HHhcCCcccEEEECCCcCC
Confidence 5899999999543
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.14 E-value=4.6e-10 Score=112.43 Aligned_cols=106 Identities=18% Similarity=0.145 Sum_probs=82.2
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHH-HHHHhCCCCCCCccEEEEeCCCHHHHHHHHh
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQ-ALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~-~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
+.++|+|+|||||+|++++++|++++ ++|.+.+|+.++... ....+.. ...++.++.+|++|.+++.++++
T Consensus 9 ~~~~vlVTGatGfIG~~l~~~L~~~G-------~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~ 80 (342)
T PLN02214 9 AGKTVCVTGAGGYIASWIVKILLERG-------YTVKGTVRNPDDPKNTHLRELEG-GKERLILCKADLQDYEALKAAID 80 (342)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCc-------CEEEEEeCCchhhhHHHHHHhhC-CCCcEEEEecCcCChHHHHHHHh
Confidence 44579999999999999999999988 789999998765322 1222210 11357788999999999999999
Q ss_pred ccCeeEeccCCCCCC-----------cHHHHHHHHHcCC-cEEecCC
Q 014694 88 QTKLLLNCVGPYRLH-----------GDPVAAACVHSGC-DYLDISG 122 (420)
Q Consensus 88 ~~dvVIn~aGp~~~~-----------~~~vv~Ac~~~g~-~yvdisg 122 (420)
++|+|||+|++.... ..+++++|.++++ ++|.+|.
T Consensus 81 ~~d~Vih~A~~~~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS 127 (342)
T PLN02214 81 GCDGVFHTASPVTDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSS 127 (342)
T ss_pred cCCEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecc
Confidence 999999999986432 2678899999887 4666654
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.10 E-value=6.3e-10 Score=109.71 Aligned_cols=108 Identities=15% Similarity=0.191 Sum_probs=80.3
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~-~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
..+|+|+|||||+|++++++|++++ ++|.+.+|+.++.......... ....++.++.+|+.|++.+.+++++
T Consensus 4 ~~~ilVtGatGfIG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 76 (322)
T PLN02662 4 GKVVCVTGASGYIASWLVKLLLQRG-------YTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDG 76 (322)
T ss_pred CCEEEEECChHHHHHHHHHHHHHCC-------CEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcC
Confidence 3579999999999999999999987 7898889986653222111100 0123678899999999999999999
Q ss_pred cCeeEeccCCCCCC---------------cHHHHHHHHHc-CC-cEEecCCcH
Q 014694 89 TKLLLNCVGPYRLH---------------GDPVAAACVHS-GC-DYLDISGEP 124 (420)
Q Consensus 89 ~dvVIn~aGp~~~~---------------~~~vv~Ac~~~-g~-~yvdisge~ 124 (420)
+|+|||+|++.... ..+++++|.+. ++ ++|.+|.-.
T Consensus 77 ~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~ 129 (322)
T PLN02662 77 CEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMA 129 (322)
T ss_pred CCEEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHH
Confidence 99999999974321 15677888876 66 577766543
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=7.3e-10 Score=111.19 Aligned_cols=108 Identities=14% Similarity=0.114 Sum_probs=80.8
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHh----CCCCCCCccEEEEeCCCHHHHHH
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWA----SPSHSLSIPILTADTTDPPSLHR 84 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l----~~~~~~~~~~i~~D~~d~~sl~~ 84 (420)
+.++|+|+|||||+|++++++|++++ ++|++.+|...........+ ......++.++.+|+.|.+++.+
T Consensus 14 ~~~~vlVtGatGfiG~~lv~~L~~~g-------~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~ 86 (348)
T PRK15181 14 APKRWLITGVAGFIGSGLLEELLFLN-------QTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQK 86 (348)
T ss_pred cCCEEEEECCccHHHHHHHHHHHHCC-------CEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHH
Confidence 34689999999999999999999987 78988888543322211111 10011357789999999999999
Q ss_pred HHhccCeeEeccCCCCCC----------------cHHHHHHHHHcCC-cEEecCCc
Q 014694 85 LCSQTKLLLNCVGPYRLH----------------GDPVAAACVHSGC-DYLDISGE 123 (420)
Q Consensus 85 ~~~~~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~-~yvdisge 123 (420)
+++++|+|||+|+..... ..+++++|.+.++ ++|.+|..
T Consensus 87 ~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~ 142 (348)
T PRK15181 87 ACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASS 142 (348)
T ss_pred HhhCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeech
Confidence 999999999999853210 1689999999998 67777653
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=9.9e-10 Score=115.48 Aligned_cols=106 Identities=18% Similarity=0.254 Sum_probs=85.4
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC--------CCCCCccEEEEeCCCHHH
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--------SHSLSIPILTADTTDPPS 81 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~--------~~~~~~~~i~~D~~d~~s 81 (420)
...|+|+||+|+||++++++|++.+ ++|++++|+.++++.+.+.+.. ....++.++.+|+.|.++
T Consensus 80 gKvVLVTGATGgIG~aLAr~LLk~G-------~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~es 152 (576)
T PLN03209 80 EDLAFVAGATGKVGSRTVRELLKLG-------FRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQ 152 (576)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-------CeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHH
Confidence 3469999999999999999999988 7999999999998776654421 001357889999999999
Q ss_pred HHHHHhccCeeEeccCCCCCC--------------cHHHHHHHHHcCC-cEEecCC
Q 014694 82 LHRLCSQTKLLLNCVGPYRLH--------------GDPVAAACVHSGC-DYLDISG 122 (420)
Q Consensus 82 l~~~~~~~dvVIn~aGp~~~~--------------~~~vv~Ac~~~g~-~yvdisg 122 (420)
+.+.+.++|+||||+|..... ..+++++|.+.|+ ++|.+|.
T Consensus 153 I~~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSS 208 (576)
T PLN03209 153 IGPALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTS 208 (576)
T ss_pred HHHHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEcc
Confidence 999999999999999964210 2678899999887 6777764
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.08 E-value=9e-10 Score=110.07 Aligned_cols=108 Identities=15% Similarity=0.172 Sum_probs=78.9
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhH-----HHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR-----VKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~k-----l~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
+|+|||||||+|++++++|++.+ ++|.+++|+.++ ++.+.+........++.++.+|++|.+++.+++
T Consensus 2 ~vlVTGatGfIG~~l~~~L~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~ 74 (343)
T TIGR01472 2 IALITGITGQDGSYLAEFLLEKG-------YEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRII 74 (343)
T ss_pred eEEEEcCCCcHHHHHHHHHHHCC-------CEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHH
Confidence 69999999999999999999987 789999987542 222221110001235788999999999999999
Q ss_pred hc--cCeeEeccCCCCCC----------------cHHHHHHHHHcCC----cEEecCCcHHH
Q 014694 87 SQ--TKLLLNCVGPYRLH----------------GDPVAAACVHSGC----DYLDISGEPEF 126 (420)
Q Consensus 87 ~~--~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~----~yvdisge~~~ 126 (420)
++ +|+|||+|+..... ..+++++|.++++ ++|.+|....+
T Consensus 75 ~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vy 136 (343)
T TIGR01472 75 DEIKPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELY 136 (343)
T ss_pred HhCCCCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhh
Confidence 85 59999999964211 1578888888775 56777654433
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.08 E-value=1.1e-09 Score=108.37 Aligned_cols=107 Identities=16% Similarity=0.165 Sum_probs=79.1
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~-~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
..+|+|+|||||+|++++++|++++ ++|.+..|+.++.+.+.+.... ....++.++.+|++|++++.+++++
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 77 (322)
T PLN02986 5 GKLVCVTGASGYIASWIVKLLLLRG-------YTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEG 77 (322)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhC
Confidence 3579999999999999999999987 7899889987654433221110 0123678899999999999999999
Q ss_pred cCeeEeccCCCCCC---------------cHHHHHHHHHc-CC-cEEecCCc
Q 014694 89 TKLLLNCVGPYRLH---------------GDPVAAACVHS-GC-DYLDISGE 123 (420)
Q Consensus 89 ~dvVIn~aGp~~~~---------------~~~vv~Ac~~~-g~-~yvdisge 123 (420)
+|+|||+|++.... ..+++++|.++ ++ ++|.+|.-
T Consensus 78 ~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~ 129 (322)
T PLN02986 78 CDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSST 129 (322)
T ss_pred CCEEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecch
Confidence 99999999975311 14566777764 45 56666543
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.4e-09 Score=109.14 Aligned_cols=86 Identities=14% Similarity=0.189 Sum_probs=71.7
Q ss_pred CCCCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHH
Q 014694 5 SQIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHR 84 (420)
Q Consensus 5 ~~~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~ 84 (420)
.+.+..++|+|+||+||+|++++++|++++ ++|++.+|+.++.+.+...+. ...++.++.+|+.|.+.+.+
T Consensus 5 ~~~~~~~~vLVtG~~GfIG~~l~~~L~~~G-------~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~ 75 (353)
T PLN02896 5 GRESATGTYCVTGATGYIGSWLVKLLLQRG-------YTVHATLRDPAKSLHLLSKWK--EGDRLRLFRADLQEEGSFDE 75 (353)
T ss_pred ccccCCCEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCChHHHHHHHHhhc--cCCeEEEEECCCCCHHHHHH
Confidence 344556789999999999999999999987 789988999877666655442 12457789999999999999
Q ss_pred HHhccCeeEeccCCC
Q 014694 85 LCSQTKLLLNCVGPY 99 (420)
Q Consensus 85 ~~~~~dvVIn~aGp~ 99 (420)
+++++|+|||+|+..
T Consensus 76 ~~~~~d~Vih~A~~~ 90 (353)
T PLN02896 76 AVKGCDGVFHVAASM 90 (353)
T ss_pred HHcCCCEEEECCccc
Confidence 999999999999964
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.3e-09 Score=109.28 Aligned_cols=107 Identities=19% Similarity=0.228 Sum_probs=81.4
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHhc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~-~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
..+|+|+|||||||++++++|++++ ++|.+.+|+.++...+...+... ...++.++.+|+.|.+.+++++++
T Consensus 5 ~k~iLVTGatGfIGs~l~~~L~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~ 77 (351)
T PLN02650 5 KETVCVTGASGFIGSWLVMRLLERG-------YTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRG 77 (351)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHCC-------CEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhC
Confidence 3479999999999999999999987 78999999876665443322110 112467899999999999999999
Q ss_pred cCeeEeccCCCCCC---------------cHHHHHHHHHcC-C-cEEecCCc
Q 014694 89 TKLLLNCVGPYRLH---------------GDPVAAACVHSG-C-DYLDISGE 123 (420)
Q Consensus 89 ~dvVIn~aGp~~~~---------------~~~vv~Ac~~~g-~-~yvdisge 123 (420)
+|+|||+|++.... ..+++++|.+.+ + ++|.+|..
T Consensus 78 ~d~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~ 129 (351)
T PLN02650 78 CTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSA 129 (351)
T ss_pred CCEEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecch
Confidence 99999999864211 156788888876 4 57777654
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.3e-09 Score=111.17 Aligned_cols=108 Identities=19% Similarity=0.329 Sum_probs=82.5
Q ss_pred CCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHH--HHHhCCCCCCCccEEEEeCCCHHHHHH
Q 014694 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQA--LQWASPSHSLSIPILTADTTDPPSLHR 84 (420)
Q Consensus 7 ~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~--~~~l~~~~~~~~~~i~~D~~d~~sl~~ 84 (420)
+...++|+|+|||||+|++++++|++++ ++|.+..|+.++++.. .+++. ....+++++.+|++|++++.+
T Consensus 57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G-------~~V~~l~R~~~~~~~~~~~~~~~-~~~~~v~~v~~Dl~d~~~l~~ 128 (390)
T PLN02657 57 EPKDVTVLVVGATGYIGKFVVRELVRRG-------YNVVAVAREKSGIRGKNGKEDTK-KELPGAEVVFGDVTDADSLRK 128 (390)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEEechhhccccchhhHHh-hhcCCceEEEeeCCCHHHHHH
Confidence 4456789999999999999999999987 7899999988654211 11110 012467899999999999999
Q ss_pred HHh----ccCeeEeccCCCCC-----C------cHHHHHHHHHcCC-cEEecCC
Q 014694 85 LCS----QTKLLLNCVGPYRL-----H------GDPVAAACVHSGC-DYLDISG 122 (420)
Q Consensus 85 ~~~----~~dvVIn~aGp~~~-----~------~~~vv~Ac~~~g~-~yvdisg 122 (420)
+++ ++|+||||+|+... + ..+++++|.+.|+ ++|.+|.
T Consensus 129 ~~~~~~~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS 182 (390)
T PLN02657 129 VLFSEGDPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSA 182 (390)
T ss_pred HHHHhCCCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEee
Confidence 998 58999999985321 1 2678999999998 5777764
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=9.5e-10 Score=110.06 Aligned_cols=102 Identities=17% Similarity=0.210 Sum_probs=79.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCC-CHHHHHHHHhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTT-DPPSLHRLCSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~-d~~sl~~~~~~~ 89 (420)
|+|+|+|||||+|++++++|++++. ++|.+.+|+.++...+.. ..+++++.+|+. +.+.+.++++++
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~------~~V~~~~r~~~~~~~~~~------~~~~~~~~~Dl~~~~~~~~~~~~~~ 69 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTD------WEVYGMDMQTDRLGDLVN------HPRMHFFEGDITINKEWIEYHVKKC 69 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCC------CeEEEEeCcHHHHHHhcc------CCCeEEEeCCCCCCHHHHHHHHcCC
Confidence 4799999999999999999998631 789989998765433221 235788999997 778888999999
Q ss_pred CeeEeccCCCCC-----C-----------cHHHHHHHHHcCCcEEecCCcH
Q 014694 90 KLLLNCVGPYRL-----H-----------GDPVAAACVHSGCDYLDISGEP 124 (420)
Q Consensus 90 dvVIn~aGp~~~-----~-----------~~~vv~Ac~~~g~~yvdisge~ 124 (420)
|+|||+++.... . ..+++++|.+.+.++|.+|...
T Consensus 70 d~ViH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~~~~v~~SS~~ 120 (347)
T PRK11908 70 DVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSE 120 (347)
T ss_pred CEEEECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcCCeEEEEecce
Confidence 999999984321 0 1578999999888888887643
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=2.1e-09 Score=107.13 Aligned_cols=82 Identities=18% Similarity=0.246 Sum_probs=65.3
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHH--HHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQAL--QWASPSHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~--~~l~~~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
+.++|+|+||+||+|++++++|++++ ++|.+..|+.+...... ..+. ...++.++.+|++|.+++.+++
T Consensus 8 ~~~~vlItG~~GfIG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~ 78 (338)
T PLN00198 8 GKKTACVIGGTGFLASLLIKLLLQKG-------YAVNTTVRDPENQKKIAHLRALQ--ELGDLKIFGADLTDEESFEAPI 78 (338)
T ss_pred CCCeEEEECCchHHHHHHHHHHHHCC-------CEEEEEECCCCCHHHHHHHHhcC--CCCceEEEEcCCCChHHHHHHH
Confidence 35679999999999999999999987 78888888765443222 1221 1235778999999999999999
Q ss_pred hccCeeEeccCCC
Q 014694 87 SQTKLLLNCVGPY 99 (420)
Q Consensus 87 ~~~dvVIn~aGp~ 99 (420)
+++|+|||+|++.
T Consensus 79 ~~~d~vih~A~~~ 91 (338)
T PLN00198 79 AGCDLVFHVATPV 91 (338)
T ss_pred hcCCEEEEeCCCC
Confidence 9999999999964
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.04 E-value=2.5e-09 Score=106.31 Aligned_cols=104 Identities=17% Similarity=0.262 Sum_probs=80.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
++|+|+||+||+|++++++|++++. ..+|.+.+|+..+...+.+.+. ..++.++.+|++|.+++.++++++|
T Consensus 5 k~vLVTGatG~IG~~l~~~L~~~g~-----~~~V~~~~r~~~~~~~~~~~~~---~~~~~~v~~Dl~d~~~l~~~~~~iD 76 (324)
T TIGR03589 5 KSILITGGTGSFGKAFISRLLENYN-----PKKIIIYSRDELKQWEMQQKFP---APCLRFFIGDVRDKERLTRALRGVD 76 (324)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHhCC-----CcEEEEEcCChhHHHHHHHHhC---CCcEEEEEccCCCHHHHHHHHhcCC
Confidence 5799999999999999999999852 1578889998776655544442 2357889999999999999999999
Q ss_pred eeEeccCCCCCC----------------cHHHHHHHHHcCC-cEEecCC
Q 014694 91 LLLNCVGPYRLH----------------GDPVAAACVHSGC-DYLDISG 122 (420)
Q Consensus 91 vVIn~aGp~~~~----------------~~~vv~Ac~~~g~-~yvdisg 122 (420)
+|||+||..... ..+++++|.++++ ++|.+|.
T Consensus 77 ~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS 125 (324)
T TIGR03589 77 YVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALST 125 (324)
T ss_pred EEEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeC
Confidence 999999964211 1567778887776 5666654
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.00 E-value=6.3e-10 Score=107.94 Aligned_cols=105 Identities=21% Similarity=0.313 Sum_probs=77.1
Q ss_pred EEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC-CCCCCcc----EEEEeCCCHHHHHHHHh
Q 014694 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIP----ILTADTTDPPSLHRLCS 87 (420)
Q Consensus 13 IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~-~~~~~~~----~i~~D~~d~~sl~~~~~ 87 (420)
|+||||+|.||+.+|++|++.+| .++++.+|++.++-.+..++.. ....++. .+.+|+.|.+.+.++++
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p------~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~ 74 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGP------KKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFE 74 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-------SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT
T ss_pred CEEEccccHHHHHHHHHHHhcCC------CeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHh
Confidence 79999999999999999999985 6899999999999888888731 0122343 34789999999999999
Q ss_pred --ccCeeEeccCCCCCC----------------cHHHHHHHHHcCC-cEEecCCc
Q 014694 88 --QTKLLLNCVGPYRLH----------------GDPVAAACVHSGC-DYLDISGE 123 (420)
Q Consensus 88 --~~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~-~yvdisge 123 (420)
+.|+|+|+|+.=+.. ..+++++|.++++ ++|.+|.+
T Consensus 75 ~~~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTD 129 (293)
T PF02719_consen 75 EYKPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTD 129 (293)
T ss_dssp --T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEEC
T ss_pred hcCCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccc
Confidence 899999999843311 2889999999999 58887744
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.00 E-value=6.5e-09 Score=97.51 Aligned_cols=81 Identities=21% Similarity=0.159 Sum_probs=71.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
.-++|+|||+.||..+++.|++.| ++|++++|+.++|+++.++++. ..+..+..|++|.+++++++.
T Consensus 7 kv~lITGASSGiG~A~A~~l~~~G-------~~vvl~aRR~drL~~la~~~~~---~~~~~~~~DVtD~~~~~~~i~~~~ 76 (246)
T COG4221 7 KVALITGASSGIGEATARALAEAG-------AKVVLAARREERLEALADEIGA---GAALALALDVTDRAAVEAAIEALP 76 (246)
T ss_pred cEEEEecCcchHHHHHHHHHHHCC-------CeEEEEeccHHHHHHHHHhhcc---CceEEEeeccCCHHHHHHHHHHHH
Confidence 468999999999999999999998 8999999999999999998851 457788999999999777765
Q ss_pred ----ccCeeEeccCCCCC
Q 014694 88 ----QTKLLLNCVGPYRL 101 (420)
Q Consensus 88 ----~~dvVIn~aGp~~~ 101 (420)
+.|++||+||-+..
T Consensus 77 ~~~g~iDiLvNNAGl~~g 94 (246)
T COG4221 77 EEFGRIDILVNNAGLALG 94 (246)
T ss_pred HhhCcccEEEecCCCCcC
Confidence 58999999997654
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=98.98 E-value=4.3e-09 Score=104.17 Aligned_cols=84 Identities=18% Similarity=0.197 Sum_probs=66.6
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHHHh
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~-~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
..++|+|+||+||||++++++|++++ ++|.+..|+.++.+.....+.. ....++.++.+|++|.+++.++++
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~ 76 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRG-------YTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID 76 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCC-------CEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc
Confidence 34689999999999999999999987 7888888887665443222110 012357789999999999999999
Q ss_pred ccCeeEeccCCC
Q 014694 88 QTKLLLNCVGPY 99 (420)
Q Consensus 88 ~~dvVIn~aGp~ 99 (420)
++|+|||+||+.
T Consensus 77 ~~d~vih~A~~~ 88 (325)
T PLN02989 77 GCETVFHTASPV 88 (325)
T ss_pred CCCEEEEeCCCC
Confidence 999999999964
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=98.96 E-value=3.5e-09 Score=107.28 Aligned_cols=106 Identities=11% Similarity=0.032 Sum_probs=81.5
Q ss_pred CCCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 014694 6 QIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 6 ~~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~ 85 (420)
.+..+++|+|+|||||+|++++++|.+++ ++|.+++|..... .... .....++.+|+.|.+.+.++
T Consensus 17 ~~~~~~~IlVtGgtGfIG~~l~~~L~~~G-------~~V~~v~r~~~~~---~~~~----~~~~~~~~~Dl~d~~~~~~~ 82 (370)
T PLN02695 17 WPSEKLRICITGAGGFIASHIARRLKAEG-------HYIIASDWKKNEH---MSED----MFCHEFHLVDLRVMENCLKV 82 (370)
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHhCC-------CEEEEEEeccccc---cccc----cccceEEECCCCCHHHHHHH
Confidence 35677899999999999999999999987 7899999864321 1100 11346788999999999999
Q ss_pred HhccCeeEeccCCCCC-----------------CcHHHHHHHHHcCC-cEEecCCcHH
Q 014694 86 CSQTKLLLNCVGPYRL-----------------HGDPVAAACVHSGC-DYLDISGEPE 125 (420)
Q Consensus 86 ~~~~dvVIn~aGp~~~-----------------~~~~vv~Ac~~~g~-~yvdisge~~ 125 (420)
++++|+|||+|+.... ...+++++|.+.++ ++|.+|....
T Consensus 83 ~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~v 140 (370)
T PLN02695 83 TKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACI 140 (370)
T ss_pred HhCCCEEEEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhh
Confidence 9999999999975421 02678999999998 6877776443
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=98.96 E-value=2.5e-09 Score=103.96 Aligned_cols=94 Identities=12% Similarity=0.080 Sum_probs=77.1
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH-----
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC----- 86 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~----- 86 (420)
+|+|+||||++|++++++|++.+ ++|.++.|+.++.. ..++..+.+|++|++++.+++
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g-------~~V~~~~R~~~~~~----------~~~~~~~~~d~~d~~~l~~a~~~~~~ 63 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAAS-------VPFLVASRSSSSSA----------GPNEKHVKFDWLDEDTWDNPFSSDDG 63 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCC-------CcEEEEeCCCcccc----------CCCCccccccCCCHHHHHHHHhcccC
Confidence 48999999999999999999987 78999999987642 124667789999999999998
Q ss_pred -hc-cCeeEeccCCCCC---CcHHHHHHHHHcCC-cEEecCC
Q 014694 87 -SQ-TKLLLNCVGPYRL---HGDPVAAACVHSGC-DYLDISG 122 (420)
Q Consensus 87 -~~-~dvVIn~aGp~~~---~~~~vv~Ac~~~g~-~yvdisg 122 (420)
++ +|.|++++++... ...+++++|+++|+ |+|.+|.
T Consensus 64 ~~g~~d~v~~~~~~~~~~~~~~~~~i~aa~~~gv~~~V~~Ss 105 (285)
T TIGR03649 64 MEPEISAVYLVAPPIPDLAPPMIKFIDFARSKGVRRFVLLSA 105 (285)
T ss_pred cCCceeEEEEeCCCCCChhHHHHHHHHHHHHcCCCEEEEeec
Confidence 56 9999999886432 24688999999998 5666653
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=98.95 E-value=6.5e-09 Score=98.10 Aligned_cols=95 Identities=25% Similarity=0.297 Sum_probs=74.3
Q ss_pred EEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHH-HHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccCe
Q 014694 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRV-KQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKL 91 (420)
Q Consensus 13 IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl-~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~dv 91 (420)
|+|+||||.+|+.+++.|++.+ ++|.+..|+..+. ...++. ..++++.+|+.|+++|.++++++|+
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~-------~~V~~l~R~~~~~~~~~l~~------~g~~vv~~d~~~~~~l~~al~g~d~ 67 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAG-------FSVRALVRDPSSDRAQQLQA------LGAEVVEADYDDPESLVAALKGVDA 67 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTT-------GCEEEEESSSHHHHHHHHHH------TTTEEEES-TT-HHHHHHHHTTCSE
T ss_pred CEEECCccHHHHHHHHHHHhCC-------CCcEEEEeccchhhhhhhhc------ccceEeecccCCHHHHHHHHcCCce
Confidence 7999999999999999999965 8999999987542 112222 2568899999999999999999999
Q ss_pred eEeccCCCCC----CcHHHHHHHHHcCCcEEec
Q 014694 92 LLNCVGPYRL----HGDPVAAACVHSGCDYLDI 120 (420)
Q Consensus 92 VIn~aGp~~~----~~~~vv~Ac~~~g~~yvdi 120 (420)
||++.++... ...++++||+++|++++-.
T Consensus 68 v~~~~~~~~~~~~~~~~~li~Aa~~agVk~~v~ 100 (233)
T PF05368_consen 68 VFSVTPPSHPSELEQQKNLIDAAKAAGVKHFVP 100 (233)
T ss_dssp EEEESSCSCCCHHHHHHHHHHHHHHHT-SEEEE
T ss_pred EEeecCcchhhhhhhhhhHHHhhhccccceEEE
Confidence 9999986532 3589999999999954433
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=98.95 E-value=3e-09 Score=115.69 Aligned_cols=106 Identities=15% Similarity=0.130 Sum_probs=81.3
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHH-HHHHHh
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPS-LHRLCS 87 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~s-l~~~~~ 87 (420)
+.++|+|+|||||+|++++++|++++. ++|++.+|+..+..... ...+++++.+|++|.++ ++++++
T Consensus 314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g------~~V~~l~r~~~~~~~~~------~~~~~~~~~gDl~d~~~~l~~~l~ 381 (660)
T PRK08125 314 RRTRVLILGVNGFIGNHLTERLLRDDN------YEVYGLDIGSDAISRFL------GHPRFHFVEGDISIHSEWIEYHIK 381 (660)
T ss_pred cCCEEEEECCCchHHHHHHHHHHhCCC------cEEEEEeCCchhhhhhc------CCCceEEEeccccCcHHHHHHHhc
Confidence 556899999999999999999998631 79999999876543221 12357889999998665 677889
Q ss_pred ccCeeEeccCCCCC--C--------------cHHHHHHHHHcCCcEEecCCcHHH
Q 014694 88 QTKLLLNCVGPYRL--H--------------GDPVAAACVHSGCDYLDISGEPEF 126 (420)
Q Consensus 88 ~~dvVIn~aGp~~~--~--------------~~~vv~Ac~~~g~~yvdisge~~~ 126 (420)
++|+|||+|+.... + ..+++++|.+++.++|.+|....+
T Consensus 382 ~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~~~~V~~SS~~vy 436 (660)
T PRK08125 382 KCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYNKRIIFPSTSEVY 436 (660)
T ss_pred CCCEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcCCeEEEEcchhhc
Confidence 99999999984321 0 267899999999888888875433
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=98.93 E-value=4e-09 Score=103.90 Aligned_cols=99 Identities=25% Similarity=0.405 Sum_probs=78.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
++|+|+||+||+|+++++.|++++ ++|.+.+|+.++...+ . ..++.++.+|+.|.+++.++++++|
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~----~---~~~~~~~~~D~~~~~~l~~~~~~~d 66 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQG-------EEVRVLVRPTSDRRNL----E---GLDVEIVEGDLRDPASLRKAVAGCR 66 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCC-------CEEEEEEecCcccccc----c---cCCceEEEeeCCCHHHHHHHHhCCC
Confidence 469999999999999999999987 7899999987664321 1 2357889999999999999999999
Q ss_pred eeEeccCCCCCC--------------cHHHHHHHHHcCC-cEEecCCc
Q 014694 91 LLLNCVGPYRLH--------------GDPVAAACVHSGC-DYLDISGE 123 (420)
Q Consensus 91 vVIn~aGp~~~~--------------~~~vv~Ac~~~g~-~yvdisge 123 (420)
+|||+++..... ..+++++|.+.++ ++|.+|..
T Consensus 67 ~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~ 114 (328)
T TIGR03466 67 ALFHVAADYRLWAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSV 114 (328)
T ss_pred EEEEeceecccCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEech
Confidence 999999864321 1567788888776 56666654
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.5e-08 Score=96.30 Aligned_cols=78 Identities=17% Similarity=0.252 Sum_probs=67.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
|.|+|+||||++|..++++|++++ ++|++.+|+.++++.+.+.++ .++.++.+|+.|.+++.++++
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dl~~~~~i~~~~~~~~ 69 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQG-------HKVIATGRRQERLQELKDELG----DNLYIAQLDVRNRAAIEEMLASLP 69 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHhc----cceEEEEecCCCHHHHHHHHHHHH
Confidence 479999999999999999999987 789999999998887766553 367889999999999988775
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
++|+|||++|..
T Consensus 70 ~~~~~id~vi~~ag~~ 85 (248)
T PRK10538 70 AEWRNIDVLVNNAGLA 85 (248)
T ss_pred HHcCCCCEEEECCCcc
Confidence 589999999864
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.1e-08 Score=97.50 Aligned_cols=82 Identities=15% Similarity=0.099 Sum_probs=69.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~-- 88 (420)
..++|+||+|++|++++++|++++ ++|++.+|++++++++.+++.. ...++.++.+|++|.+++++++++
T Consensus 8 ~~vlItGasg~iG~~la~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~ 79 (262)
T PRK13394 8 KTAVVTGAASGIGKEIALELARAG-------AAVAIADLNQDGANAVADEINK-AGGKAIGVAMDVTNEDAVNAGIDKVA 79 (262)
T ss_pred CEEEEECCCChHHHHHHHHHHHCC-------CeEEEEeCChHHHHHHHHHHHh-cCceEEEEECCCCCHHHHHHHHHHHH
Confidence 479999999999999999999988 7899999999888877776642 223567789999999999888764
Q ss_pred -----cCeeEeccCCCC
Q 014694 89 -----TKLLLNCVGPYR 100 (420)
Q Consensus 89 -----~dvVIn~aGp~~ 100 (420)
+|+||||+|...
T Consensus 80 ~~~~~~d~vi~~ag~~~ 96 (262)
T PRK13394 80 ERFGSVDILVSNAGIQI 96 (262)
T ss_pred HHcCCCCEEEECCccCC
Confidence 799999999753
|
|
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=98.91 E-value=3.3e-09 Score=100.76 Aligned_cols=102 Identities=20% Similarity=0.366 Sum_probs=80.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
.-..|+|||||+|+.++..|++.| -+++|--|..+---.-++-++ +..++-+...|+.|+++++++++...
T Consensus 62 iVaTVFGAtGFlGryvvnklak~G-------SQviiPyR~d~~~~r~lkvmG--dLGQvl~~~fd~~DedSIr~vvk~sN 132 (391)
T KOG2865|consen 62 IVATVFGATGFLGRYVVNKLAKMG-------SQVIIPYRGDEYDPRHLKVMG--DLGQVLFMKFDLRDEDSIRAVVKHSN 132 (391)
T ss_pred eEEEEecccccccHHHHHHHhhcC-------CeEEEeccCCccchhheeecc--cccceeeeccCCCCHHHHHHHHHhCc
Confidence 357899999999999999999998 689998885432111112222 23578889999999999999999999
Q ss_pred eeEeccCCCCCC------------cHHHHHHHHHcCC-cEEecC
Q 014694 91 LLLNCVGPYRLH------------GDPVAAACVHSGC-DYLDIS 121 (420)
Q Consensus 91 vVIn~aGp~~~~------------~~~vv~Ac~~~g~-~yvdis 121 (420)
||||..|--... .+.+.+.|.+.|+ +||++|
T Consensus 133 VVINLIGrd~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS 176 (391)
T KOG2865|consen 133 VVINLIGRDYETKNFSFEDVNVHIAERLARICKEAGVERFIHVS 176 (391)
T ss_pred EEEEeeccccccCCcccccccchHHHHHHHHHHhhChhheeehh
Confidence 999999953221 3889999999999 799876
|
|
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=98.91 E-value=9.8e-09 Score=103.93 Aligned_cols=106 Identities=20% Similarity=0.154 Sum_probs=79.6
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC-C----CCCCccEEEEeCCCHHHHH
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-S----HSLSIPILTADTTDPPSLH 83 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~-~----~~~~~~~i~~D~~d~~sl~ 83 (420)
...+|+|+||+||+|++++++|++++ ++|.+..|+.++++.+. ++.. . ...++.++.+|++|.+++.
T Consensus 52 ~~k~VLVTGatGfIG~~lv~~L~~~G-------~~V~~~~r~~~~~~~l~-~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~ 123 (367)
T PLN02686 52 EARLVCVTGGVSFLGLAIVDRLLRHG-------YSVRIAVDTQEDKEKLR-EMEMFGEMGRSNDGIWTVMANLTEPESLH 123 (367)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHH-HHhhhccccccCCceEEEEcCCCCHHHHH
Confidence 44589999999999999999999998 78988889877665542 2210 0 0124678899999999999
Q ss_pred HHHhccCeeEeccCCCCCC----------------cHHHHHHHHHc-CCc-EEecCC
Q 014694 84 RLCSQTKLLLNCVGPYRLH----------------GDPVAAACVHS-GCD-YLDISG 122 (420)
Q Consensus 84 ~~~~~~dvVIn~aGp~~~~----------------~~~vv~Ac~~~-g~~-yvdisg 122 (420)
++++++|.|||+++..... ..+++++|.+. +++ +|.+|.
T Consensus 124 ~~i~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS 180 (367)
T PLN02686 124 EAFDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSS 180 (367)
T ss_pred HHHHhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEecc
Confidence 9999999999999864211 15688888875 564 555554
|
|
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.1e-08 Score=101.57 Aligned_cols=106 Identities=11% Similarity=0.120 Sum_probs=75.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--c
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--Q 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--~ 88 (420)
|+|+|+|||||+|++++++|++++ ++|++.+|...........+......++.++.+|++|.+++.++++ +
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g-------~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 73 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNG-------HDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHA 73 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCC-------CeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCC
Confidence 579999999999999999999987 7888887643222221111110012346778999999999999887 5
Q ss_pred cCeeEeccCCCCCC----------------cHHHHHHHHHcCC-cEEecCCc
Q 014694 89 TKLLLNCVGPYRLH----------------GDPVAAACVHSGC-DYLDISGE 123 (420)
Q Consensus 89 ~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~-~yvdisge 123 (420)
+|+|||++|..... ..+++++|.++++ ++|.+|.-
T Consensus 74 ~d~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~ 125 (338)
T PRK10675 74 IDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSA 125 (338)
T ss_pred CCEEEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccH
Confidence 89999999854311 1567888888887 46666653
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.9e-08 Score=96.19 Aligned_cols=79 Identities=24% Similarity=0.300 Sum_probs=64.2
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCC-HHHHHHHH-
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTD-PPSLHRLC- 86 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d-~~sl~~~~- 86 (420)
+.++|+|+||||++|+.++++|++++ ++|.+..|+.++++.... ...++.++.+|++| .+++.+.+
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g-------~~V~~~~R~~~~~~~~~~-----~~~~~~~~~~Dl~d~~~~l~~~~~ 83 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKG-------FAVKAGVRDVDKAKTSLP-----QDPSLQIVRADVTEGSDKLVEAIG 83 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCC-------CEEEEEecCHHHHHHhcc-----cCCceEEEEeeCCCCHHHHHHHhh
Confidence 45689999999999999999999987 789989999887654332 12357889999998 47787777
Q ss_pred hccCeeEeccCCC
Q 014694 87 SQTKLLLNCVGPY 99 (420)
Q Consensus 87 ~~~dvVIn~aGp~ 99 (420)
.++|+||+++|..
T Consensus 84 ~~~d~vi~~~g~~ 96 (251)
T PLN00141 84 DDSDAVICATGFR 96 (251)
T ss_pred cCCCEEEECCCCC
Confidence 6899999998863
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=98.90 E-value=6.8e-09 Score=107.45 Aligned_cols=104 Identities=13% Similarity=0.187 Sum_probs=74.5
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
++|+|+|+|||||||++++++|++++ ++|++.+|.......-...+. ...+++++..|+.+. .+.+
T Consensus 119 ~~mkILVTGatGFIGs~Lv~~Ll~~G-------~~V~~ldr~~~~~~~~~~~~~--~~~~~~~~~~Di~~~-----~~~~ 184 (436)
T PLN02166 119 KRLRIVVTGGAGFVGSHLVDKLIGRG-------DEVIVIDNFFTGRKENLVHLF--GNPRFELIRHDVVEP-----ILLE 184 (436)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCC-------CEEEEEeCCCCccHhHhhhhc--cCCceEEEECccccc-----cccC
Confidence 45899999999999999999999987 789988885322111111111 123567777887654 3468
Q ss_pred cCeeEeccCCCCC--C--------------cHHHHHHHHHcCCcEEecCCcHHH
Q 014694 89 TKLLLNCVGPYRL--H--------------GDPVAAACVHSGCDYLDISGEPEF 126 (420)
Q Consensus 89 ~dvVIn~aGp~~~--~--------------~~~vv~Ac~~~g~~yvdisge~~~ 126 (420)
+|+|||+|++... . ..+++++|.++++++|.+|....+
T Consensus 185 ~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~r~V~~SS~~VY 238 (436)
T PLN02166 185 VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGARFLLTSTSEVY 238 (436)
T ss_pred CCEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECcHHHh
Confidence 9999999985321 0 278999999999999988775544
|
|
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.90 E-value=1e-08 Score=98.54 Aligned_cols=99 Identities=17% Similarity=0.232 Sum_probs=76.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--c
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--Q 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--~ 88 (420)
|+|+|+||+||||+++|.+|++.+ ++|++.+.-...-.+.+... ..+++++|+.|.+.|+++++ +
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G-------~~vvV~DNL~~g~~~~v~~~------~~~f~~gDi~D~~~L~~vf~~~~ 67 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTG-------HEVVVLDNLSNGHKIALLKL------QFKFYEGDLLDRALLTAVFEENK 67 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCC-------CeEEEEecCCCCCHHHhhhc------cCceEEeccccHHHHHHHHHhcC
Confidence 579999999999999999999988 89999997433222222221 16899999999999999998 5
Q ss_pred cCeeEeccCCCCC----------C------cHHHHHHHHHcCCc-EEecCC
Q 014694 89 TKLLLNCVGPYRL----------H------GDPVAAACVHSGCD-YLDISG 122 (420)
Q Consensus 89 ~dvVIn~aGp~~~----------~------~~~vv~Ac~~~g~~-yvdisg 122 (420)
.|.|||+||--.. | ...++++|.++|+. +|..|.
T Consensus 68 idaViHFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSSt 118 (329)
T COG1087 68 IDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSST 118 (329)
T ss_pred CCEEEECccccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecc
Confidence 8999999994332 1 17789999999985 555543
|
|
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.89 E-value=1.1e-08 Score=105.74 Aligned_cols=108 Identities=19% Similarity=0.261 Sum_probs=90.5
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHhc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~-~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
...|+||||+|-+|+.+|+++++.+| -++++.+|++-++..+..++... ...++..+.+|+.|.+.+.+++.+
T Consensus 250 gK~vLVTGagGSiGsel~~qil~~~p------~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~ 323 (588)
T COG1086 250 GKTVLVTGGGGSIGSELCRQILKFNP------KEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEG 323 (588)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHhcCC------CEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhc
Confidence 44799999999999999999999975 68999999999998888877531 135677899999999999999998
Q ss_pred --cCeeEeccCCCCCC----------------cHHHHHHHHHcCC-cEEecCCc
Q 014694 89 --TKLLLNCVGPYRLH----------------GDPVAAACVHSGC-DYLDISGE 123 (420)
Q Consensus 89 --~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~-~yvdisge 123 (420)
+|+|+|+|+--+.. .+++++||.++|+ ++|-+|.+
T Consensus 324 ~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTD 377 (588)
T COG1086 324 HKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTD 377 (588)
T ss_pred CCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecC
Confidence 99999999843321 2899999999999 57777643
|
|
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=98.89 E-value=2.2e-08 Score=98.31 Aligned_cols=107 Identities=18% Similarity=0.201 Sum_probs=79.8
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh--HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT--RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~--kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
...|+|+|||||+|++++++|++++ ++|++..|+.+ ++...+..+.. ...++.++.+|++|.+++.+++.
T Consensus 6 ~k~vlVTGatG~IG~~lv~~Ll~~G-------~~V~~~~R~~~~~~~~~~~~~l~~-~~~~~~~~~~Dl~d~~~~~~~l~ 77 (297)
T PLN02583 6 SKSVCVMDASGYVGFWLVKRLLSRG-------YTVHAAVQKNGETEIEKEIRGLSC-EEERLKVFDVDPLDYHSILDALK 77 (297)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC-------CEEEEEEcCchhhhHHHHHHhccc-CCCceEEEEecCCCHHHHHHHHc
Confidence 3479999999999999999999988 89999999643 33333343321 12357889999999999999999
Q ss_pred ccCeeEeccCCCCCC--------------cHHHHHHHHHc-CC-cEEecCCcH
Q 014694 88 QTKLLLNCVGPYRLH--------------GDPVAAACVHS-GC-DYLDISGEP 124 (420)
Q Consensus 88 ~~dvVIn~aGp~~~~--------------~~~vv~Ac~~~-g~-~yvdisge~ 124 (420)
+++.|+|++++.... ..+++++|.+. ++ +.|.+|...
T Consensus 78 ~~d~v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~ 130 (297)
T PLN02583 78 GCSGLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLT 130 (297)
T ss_pred CCCEEEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchH
Confidence 999999988764321 26778888876 34 566666543
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=98.89 E-value=8.1e-09 Score=96.68 Aligned_cols=98 Identities=20% Similarity=0.318 Sum_probs=77.3
Q ss_pred EEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc--C
Q 014694 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT--K 90 (420)
Q Consensus 13 IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~--d 90 (420)
|+|+|||||+|++++++|++++ ..|+...|+.........+ .++.++.+|+.|.+.++++++.. |
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g-------~~v~~~~~~~~~~~~~~~~------~~~~~~~~dl~~~~~~~~~~~~~~~d 67 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKG-------HEVIVLSRSSNSESFEEKK------LNVEFVIGDLTDKEQLEKLLEKANID 67 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTT-------TEEEEEESCSTGGHHHHHH------TTEEEEESETTSHHHHHHHHHHHTES
T ss_pred EEEEccCCHHHHHHHHHHHHcC-------Ccccccccccccccccccc------ceEEEEEeeccccccccccccccCce
Confidence 7999999999999999999998 6777777765544222221 15789999999999999999977 9
Q ss_pred eeEeccCCCCC-----C-----------cHHHHHHHHHcCC-cEEecCCc
Q 014694 91 LLLNCVGPYRL-----H-----------GDPVAAACVHSGC-DYLDISGE 123 (420)
Q Consensus 91 vVIn~aGp~~~-----~-----------~~~vv~Ac~~~g~-~yvdisge 123 (420)
+|||+++.... . ..+++++|.+.++ +++.++..
T Consensus 68 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~ 117 (236)
T PF01370_consen 68 VVIHLAAFSSNPESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSA 117 (236)
T ss_dssp EEEEEBSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEG
T ss_pred EEEEeecccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999997521 0 2778889998888 67777653
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.3e-08 Score=101.91 Aligned_cols=103 Identities=14% Similarity=0.188 Sum_probs=76.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~-- 88 (420)
++|+|+|||||+|+++++.|++++ .+|.+.+|+........+.+. ...++.++.+|++|.+++.++++.
T Consensus 5 k~ilItGatG~IG~~l~~~L~~~G-------~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~ 75 (349)
T TIGR02622 5 KKVLVTGHTGFKGSWLSLWLLELG-------AEVYGYSLDPPTSPNLFELLN--LAKKIEDHFGDIRDAAKLRKAIAEFK 75 (349)
T ss_pred CEEEEECCCChhHHHHHHHHHHCC-------CEEEEEeCCCccchhHHHHHh--hcCCceEEEccCCCHHHHHHHHhhcC
Confidence 579999999999999999999987 789888998765443333332 123567889999999999999985
Q ss_pred cCeeEeccCCCCCC----------------cHHHHHHHHHcC-C-cEEecCC
Q 014694 89 TKLLLNCVGPYRLH----------------GDPVAAACVHSG-C-DYLDISG 122 (420)
Q Consensus 89 ~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g-~-~yvdisg 122 (420)
+|+|||++|..... ..+++++|.+.+ . ++|.+|.
T Consensus 76 ~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS 127 (349)
T TIGR02622 76 PEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTS 127 (349)
T ss_pred CCEEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEec
Confidence 59999999843210 156677777665 3 4666654
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.88 E-value=2.9e-08 Score=95.78 Aligned_cols=76 Identities=22% Similarity=0.208 Sum_probs=65.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|++|+.++++|++++ ++|++.+|+.++++++.+ .++.++.+|++|+++++++++
T Consensus 4 k~vlItGasggiG~~la~~l~~~G-------~~V~~~~r~~~~l~~~~~-------~~~~~~~~Dv~~~~~~~~~~~~~~ 69 (273)
T PRK06182 4 KVALVTGASSGIGKATARRLAAQG-------YTVYGAARRVDKMEDLAS-------LGVHPLSLDVTDEASIKAAVDTII 69 (273)
T ss_pred CEEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHh-------CCCeEEEeeCCCHHHHHHHHHHHH
Confidence 479999999999999999999987 799999999988765532 247789999999999999887
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
++|+|||++|...
T Consensus 70 ~~~~~id~li~~ag~~~ 86 (273)
T PRK06182 70 AEEGRIDVLVNNAGYGS 86 (273)
T ss_pred HhcCCCCEEEECCCcCC
Confidence 6799999999643
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=2.4e-08 Score=96.36 Aligned_cols=79 Identities=18% Similarity=0.146 Sum_probs=67.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|++|++++++|++++ .+|.+..|+.++++.+.+... .++.++.+|++|.+++.++++
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g-------~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~ 71 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARG-------DRVAATVRRPDALDDLKARYG----DRLWVLQLDVTDSAAVRAVVDRAF 71 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHhcc----CceEEEEccCCCHHHHHHHHHHHH
Confidence 369999999999999999999987 789999999988877766542 467889999999999988875
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
++|+|||++|...
T Consensus 72 ~~~~~id~vi~~ag~~~ 88 (276)
T PRK06482 72 AALGRIDVVVSNAGYGL 88 (276)
T ss_pred HHcCCCCEEEECCCCCC
Confidence 3799999999654
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=7e-09 Score=101.92 Aligned_cols=89 Identities=16% Similarity=0.223 Sum_probs=70.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--c
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--Q 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--~ 88 (420)
|+|+|+||+||+|++++++|++++ +|.+.+|... .+.+|++|.+.+.++++ +
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g--------~V~~~~~~~~------------------~~~~Dl~d~~~~~~~~~~~~ 54 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG--------NLIALDVHST------------------DYCGDFSNPEGVAETVRKIR 54 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC--------CEEEeccccc------------------cccCCCCCHHHHHHHHHhcC
Confidence 479999999999999999998875 3666676421 23579999999999998 5
Q ss_pred cCeeEeccCCCCCC----------------cHHHHHHHHHcCCcEEecCCcHH
Q 014694 89 TKLLLNCVGPYRLH----------------GDPVAAACVHSGCDYLDISGEPE 125 (420)
Q Consensus 89 ~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~~yvdisge~~ 125 (420)
+|+|||||+..... ..+++++|.+.|+++|.+|....
T Consensus 55 ~D~Vih~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~~~v~~Ss~~V 107 (299)
T PRK09987 55 PDVIVNAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVVHYSTDYV 107 (299)
T ss_pred CCEEEECCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEccceE
Confidence 89999999975321 15788999999988888876443
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=1e-08 Score=110.76 Aligned_cols=94 Identities=17% Similarity=0.254 Sum_probs=76.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
|+|+|+|||||+|++++++|++.+ ++|.+.+|+.... ...+++++.+|+.|+. +.+++.++|
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G-------~~Vi~ldr~~~~~----------~~~~ve~v~~Dl~d~~-l~~al~~~D 62 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAG-------HTVSGIAQHPHDA----------LDPRVDYVCASLRNPV-LQELAGEAD 62 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC-------CEEEEEeCChhhc----------ccCCceEEEccCCCHH-HHHHhcCCC
Confidence 479999999999999999999987 7899999875432 1235788999999984 788889999
Q ss_pred eeEeccCCCCCC--------cHHHHHHHHHcCCcEEecCC
Q 014694 91 LLLNCVGPYRLH--------GDPVAAACVHSGCDYLDISG 122 (420)
Q Consensus 91 vVIn~aGp~~~~--------~~~vv~Ac~~~g~~yvdisg 122 (420)
+|||++++.... ..+++++|.++|++.|.+|+
T Consensus 63 ~VIHLAa~~~~~~~~vNv~Gt~nLleAA~~~GvRiV~~SS 102 (699)
T PRK12320 63 AVIHLAPVDTSAPGGVGITGLAHVANAAARAGARLLFVSQ 102 (699)
T ss_pred EEEEcCccCccchhhHHHHHHHHHHHHHHHcCCeEEEEEC
Confidence 999999864211 26789999999998887774
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=2.3e-08 Score=94.58 Aligned_cols=81 Identities=17% Similarity=0.133 Sum_probs=69.1
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc-
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~- 88 (420)
..+++|+||+|++|+.++++|++++ ++|++++|+.++++.+.+++.. ..++.++.+|+.|++++.+++++
T Consensus 5 ~~~vlItGasg~iG~~l~~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~ 75 (251)
T PRK07231 5 GKVAIVTGASSGIGEGIARRFAAEG-------ARVVVTDRNEEAAERVAAEILA--GGRAIAVAADVSDEADVEAAVAAA 75 (251)
T ss_pred CcEEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHH
Confidence 3589999999999999999999988 7899999999888877776641 24577899999999999988764
Q ss_pred ------cCeeEeccCCC
Q 014694 89 ------TKLLLNCVGPY 99 (420)
Q Consensus 89 ------~dvVIn~aGp~ 99 (420)
.|+|||++|..
T Consensus 76 ~~~~~~~d~vi~~ag~~ 92 (251)
T PRK07231 76 LERFGSVDILVNNAGTT 92 (251)
T ss_pred HHHhCCCCEEEECCCCC
Confidence 59999999964
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.3e-08 Score=101.56 Aligned_cols=105 Identities=15% Similarity=0.135 Sum_probs=75.5
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhH-----HHHHHHHhCCCCCCCccEEEEeCCCHHHHHH
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR-----VKQALQWASPSHSLSIPILTADTTDPPSLHR 84 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~k-----l~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~ 84 (420)
.++|+|+|||||+|++++++|++.+ ++|.+++|+.+. ++.+..... ....++.++.+|+.|.+++.+
T Consensus 6 ~~~vlVTGatGfiG~~l~~~L~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~ 77 (340)
T PLN02653 6 RKVALITGITGQDGSYLTEFLLSKG-------YEVHGIIRRSSNFNTQRLDHIYIDPH-PNKARMKLHYGDLSDASSLRR 77 (340)
T ss_pred CCEEEEECCCCccHHHHHHHHHHCC-------CEEEEEecccccccccchhhhccccc-cccCceEEEEecCCCHHHHHH
Confidence 3579999999999999999999988 789988886542 222211110 012357889999999999999
Q ss_pred HHhc--cCeeEeccCCCCCC----------------cHHHHHHHHHcCC------cEEecCC
Q 014694 85 LCSQ--TKLLLNCVGPYRLH----------------GDPVAAACVHSGC------DYLDISG 122 (420)
Q Consensus 85 ~~~~--~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~------~yvdisg 122 (420)
+++. +|+|||+|+..... ..+++++|.+.++ ++|.+|.
T Consensus 78 ~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss 139 (340)
T PLN02653 78 WLDDIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGS 139 (340)
T ss_pred HHHHcCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEecc
Confidence 9985 59999999964311 1556777777664 4555553
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=3.1e-08 Score=94.11 Aligned_cols=82 Identities=16% Similarity=0.066 Sum_probs=69.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..|+|+||+|++|++++++|++++ ++|++.+|+.+++++..+++.. ...++.++.+|+.|++++.++++
T Consensus 5 ~~vlItG~sg~iG~~la~~l~~~g-------~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~ 76 (258)
T PRK12429 5 KVALVTGAASGIGLEIALALAKEG-------AKVVIADLNDEAAAAAAEALQK-AGGKAIGVAMDVTDEEAINAGIDYAV 76 (258)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC-------CeEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 479999999999999999999987 7999999999988777666531 13467789999999999988877
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
..|+|||++|...
T Consensus 77 ~~~~~~d~vi~~a~~~~ 93 (258)
T PRK12429 77 ETFGGVDILVNNAGIQH 93 (258)
T ss_pred HHcCCCCEEEECCCCCC
Confidence 4799999999643
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.4e-08 Score=96.93 Aligned_cols=88 Identities=11% Similarity=-0.022 Sum_probs=70.6
Q ss_pred CCCCCCCCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHH
Q 014694 1 MQAQSQIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPP 80 (420)
Q Consensus 1 m~~~~~~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~ 80 (420)
|.++.-......++|+||+|++|+.++++|++++ .+|++.+|+.++.+++.++++ .++.++.+|++|.+
T Consensus 1 ~~~~~~~~~~k~vlItG~sg~IG~~~a~~l~~~g-------~~v~~~~~~~~~~~~~~~~~~----~~~~~~~~Dl~~~~ 69 (255)
T PRK05717 1 MSEPNPGHNGRVALVTGAARGIGLGIAAWLIAEG-------WQVVLADLDRERGSKVAKALG----ENAWFIAMDVADEA 69 (255)
T ss_pred CCCCCcccCCCEEEEeCCcchHHHHHHHHHHHcC-------CEEEEEcCCHHHHHHHHHHcC----CceEEEEccCCCHH
Confidence 5555444444579999999999999999999987 789999999888777666543 35678999999999
Q ss_pred HHHHHHh-------ccCeeEeccCCC
Q 014694 81 SLHRLCS-------QTKLLLNCVGPY 99 (420)
Q Consensus 81 sl~~~~~-------~~dvVIn~aGp~ 99 (420)
++.++++ ..|+|||++|..
T Consensus 70 ~~~~~~~~~~~~~g~id~li~~ag~~ 95 (255)
T PRK05717 70 QVAAGVAEVLGQFGRLDALVCNAAIA 95 (255)
T ss_pred HHHHHHHHHHHHhCCCCEEEECCCcc
Confidence 8877654 369999999964
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.4e-08 Score=100.58 Aligned_cols=82 Identities=27% Similarity=0.208 Sum_probs=70.1
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc-
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~- 88 (420)
...++|+||+|+||..+++.|++++ .+|++++|+.++++++.+++.. ...++.++.+|++|.++++++++.
T Consensus 6 ~k~vlVTGas~gIG~~~a~~L~~~G-------~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~v~~~~~~~ 77 (322)
T PRK07453 6 KGTVIITGASSGVGLYAAKALAKRG-------WHVIMACRNLKKAEAAAQELGI-PPDSYTIIHIDLGDLDSVRRFVDDF 77 (322)
T ss_pred CCEEEEEcCCChHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHhhc-cCCceEEEEecCCCHHHHHHHHHHH
Confidence 3479999999999999999999988 7899999999998888777642 123577899999999999988864
Q ss_pred ------cCeeEeccCCC
Q 014694 89 ------TKLLLNCVGPY 99 (420)
Q Consensus 89 ------~dvVIn~aGp~ 99 (420)
.|+|||+||..
T Consensus 78 ~~~~~~iD~li~nAg~~ 94 (322)
T PRK07453 78 RALGKPLDALVCNAAVY 94 (322)
T ss_pred HHhCCCccEEEECCccc
Confidence 89999999964
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=98.84 E-value=2.6e-08 Score=99.48 Aligned_cols=105 Identities=12% Similarity=0.197 Sum_probs=77.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhH----HHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR----VKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~k----l~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
.+|+|+|||||+|++++++|++.+ ++|++.+|.... .+.+.+... ....++.++.+|++|++++.+++
T Consensus 6 ~~vlItGatG~iG~~l~~~L~~~g-------~~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~l~~~~ 77 (352)
T PLN02240 6 RTILVTGGAGYIGSHTVLQLLLAG-------YKVVVIDNLDNSSEEALRRVKELAG-DLGDNLVFHKVDLRDKEALEKVF 77 (352)
T ss_pred CEEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCCcchHHHHHHHHHhhc-ccCccceEEecCcCCHHHHHHHH
Confidence 579999999999999999999987 788888875322 222222111 01235788999999999999998
Q ss_pred h--ccCeeEeccCCCCCC----------------cHHHHHHHHHcCC-cEEecCCc
Q 014694 87 S--QTKLLLNCVGPYRLH----------------GDPVAAACVHSGC-DYLDISGE 123 (420)
Q Consensus 87 ~--~~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~-~yvdisge 123 (420)
+ ++|+||||+|..... ..+++++|.+.++ ++|.+|..
T Consensus 78 ~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~ 133 (352)
T PLN02240 78 ASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSA 133 (352)
T ss_pred HhCCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccH
Confidence 7 689999999853211 1477889988886 57777764
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=3.6e-08 Score=97.48 Aligned_cols=77 Identities=18% Similarity=0.250 Sum_probs=67.4
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..|+|+||||++|++++++|++++ ++|++++|+.++++++.+++. ++.++.+|++|.++++++++
T Consensus 27 k~vlITGasggIG~~~a~~L~~~G-------~~Vv~~~R~~~~~~~~~~~l~-----~v~~~~~Dl~d~~~v~~~~~~~~ 94 (315)
T PRK06196 27 KTAIVTGGYSGLGLETTRALAQAG-------AHVIVPARRPDVAREALAGID-----GVEVVMLDLADLESVRAFAERFL 94 (315)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhh-----hCeEEEccCCCHHHHHHHHHHHH
Confidence 479999999999999999999988 789999999998887776653 47789999999999988875
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
++|+|||+||..
T Consensus 95 ~~~~~iD~li~nAg~~ 110 (315)
T PRK06196 95 DSGRRIDILINNAGVM 110 (315)
T ss_pred hcCCCCCEEEECCCCC
Confidence 479999999964
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=3.5e-08 Score=95.10 Aligned_cols=78 Identities=21% Similarity=0.145 Sum_probs=66.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||||++|+.++++|++++ ++|++.+|+.++++++.+++. ++.++.+|++|+++++++++
T Consensus 6 ~~ilVtGasggiG~~la~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~ 73 (273)
T PRK07825 6 KVVAITGGARGIGLATARALAALG-------ARVAIGDLDEALAKETAAELG-----LVVGGPLDVTDPASFAAFLDAVE 73 (273)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHhc-----cceEEEccCCCHHHHHHHHHHHH
Confidence 479999999999999999999987 789999999999887776653 46789999999999877665
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
..|++||++|...
T Consensus 74 ~~~~~id~li~~ag~~~ 90 (273)
T PRK07825 74 ADLGPIDVLVNNAGVMP 90 (273)
T ss_pred HHcCCCCEEEECCCcCC
Confidence 4699999999643
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=98.84 E-value=3.1e-08 Score=102.78 Aligned_cols=106 Identities=11% Similarity=0.042 Sum_probs=74.1
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh---H--------------HHHHHHHhCCCCCCCccE
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT---R--------------VKQALQWASPSHSLSIPI 71 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~---k--------------l~~~~~~l~~~~~~~~~~ 71 (420)
+.++|+|+|||||||++++++|++++ ++|++++|... + .+.+ +.+......++.+
T Consensus 46 ~~k~VLVTGatGfIGs~Lv~~L~~~G-------~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~v~~ 117 (442)
T PLN02572 46 KKKKVMVIGGDGYCGWATALHLSKRG-------YEVAIVDNLCRRLFDHQLGLDSLTPIASIHERV-RRWKEVSGKEIEL 117 (442)
T ss_pred cCCEEEEECCCcHHHHHHHHHHHHCC-------CeEEEEeccccccccccccccccccccchHHHH-HHHHHhhCCcceE
Confidence 34579999999999999999999987 78888764211 0 0011 1110001235789
Q ss_pred EEEeCCCHHHHHHHHhc--cCeeEeccCCCCC-------------C------cHHHHHHHHHcCC--cEEecCC
Q 014694 72 LTADTTDPPSLHRLCSQ--TKLLLNCVGPYRL-------------H------GDPVAAACVHSGC--DYLDISG 122 (420)
Q Consensus 72 i~~D~~d~~sl~~~~~~--~dvVIn~aGp~~~-------------~------~~~vv~Ac~~~g~--~yvdisg 122 (420)
+.+|+.|.+.+.+++++ +|+|||+|+.... . ..+++++|.+.++ ++|.+|.
T Consensus 118 v~~Dl~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS 191 (442)
T PLN02572 118 YVGDICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGT 191 (442)
T ss_pred EECCCCCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEec
Confidence 99999999999999984 8999999964210 0 1667888888875 5666654
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.4e-08 Score=105.34 Aligned_cols=103 Identities=15% Similarity=0.209 Sum_probs=74.8
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHH-HHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRV-KQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl-~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
+.++|+|+|||||+|++++++|++++ ++|++.+|..... +.+...+. ..+++++.+|+.++ .+.
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~G-------~~V~~ld~~~~~~~~~~~~~~~---~~~~~~i~~D~~~~-----~l~ 182 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMARG-------DSVIVVDNFFTGRKENVMHHFS---NPNFELIRHDVVEP-----ILL 182 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHCc-------CEEEEEeCCCccchhhhhhhcc---CCceEEEECCccCh-----hhc
Confidence 45789999999999999999999987 7888888753221 11211121 23567788888664 345
Q ss_pred ccCeeEeccCCCCC--C--------------cHHHHHHHHHcCCcEEecCCcHHH
Q 014694 88 QTKLLLNCVGPYRL--H--------------GDPVAAACVHSGCDYLDISGEPEF 126 (420)
Q Consensus 88 ~~dvVIn~aGp~~~--~--------------~~~vv~Ac~~~g~~yvdisge~~~ 126 (420)
++|+|||+|+.... + ..+++++|.++++++|.+|....+
T Consensus 183 ~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~r~V~~SS~~VY 237 (442)
T PLN02206 183 EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVY 237 (442)
T ss_pred CCCEEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECChHHh
Confidence 79999999985321 0 277899999999999988875544
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.4e-08 Score=98.49 Aligned_cols=82 Identities=21% Similarity=0.184 Sum_probs=69.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~-- 88 (420)
..++|+||+|+||++++++|++++ ++|++++|+.+++++..+++.. ...++.++.+|++|.+++++++++
T Consensus 7 k~vlVtGasggIG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~~ 78 (287)
T PRK06194 7 KVAVITGAASGFGLAFARIGAALG-------MKLVLADVQQDALDRAVAELRA-QGAEVLGVRTDVSDAAQVEALADAAL 78 (287)
T ss_pred CEEEEeCCccHHHHHHHHHHHHCC-------CEEEEEeCChHHHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 479999999999999999999988 7899999998888877776631 123567799999999999998874
Q ss_pred -----cCeeEeccCCCC
Q 014694 89 -----TKLLLNCVGPYR 100 (420)
Q Consensus 89 -----~dvVIn~aGp~~ 100 (420)
.|+|||+||...
T Consensus 79 ~~~g~id~vi~~Ag~~~ 95 (287)
T PRK06194 79 ERFGAVHLLFNNAGVGA 95 (287)
T ss_pred HHcCCCCEEEECCCCCC
Confidence 699999999754
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.7e-08 Score=95.93 Aligned_cols=83 Identities=23% Similarity=0.296 Sum_probs=68.6
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHhc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~-~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
...++|+||+|++|+.+++.|++++ ++|++.+|+.++++++.+++... ....+.++.+|++|++++.+++++
T Consensus 4 ~k~vlItGas~giG~~~a~~l~~~g-------~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 76 (256)
T PRK09186 4 GKTILITGAGGLIGSALVKAILEAG-------GIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSK 76 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHH
Confidence 3579999999999999999999988 78999999999988877776321 122456779999999999998874
Q ss_pred -------cCeeEeccCCC
Q 014694 89 -------TKLLLNCVGPY 99 (420)
Q Consensus 89 -------~dvVIn~aGp~ 99 (420)
.|+||||+|+.
T Consensus 77 ~~~~~~~id~vi~~A~~~ 94 (256)
T PRK09186 77 SAEKYGKIDGAVNCAYPR 94 (256)
T ss_pred HHHHcCCccEEEECCccc
Confidence 79999999753
|
|
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=3.7e-08 Score=89.61 Aligned_cols=107 Identities=14% Similarity=0.186 Sum_probs=85.4
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~-- 88 (420)
|+++|+|||||+|. +++.|++.+ ++|.+.+|+.++++.+...+. ...++.++.+|+.|++++.+++++
T Consensus 1 m~vlVtGGtG~gg~-la~~L~~~G-------~~V~v~~R~~~~~~~l~~~l~--~~~~i~~~~~Dv~d~~sv~~~i~~~l 70 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLCEKG-------FHVSVIARREVKLENVKREST--TPESITPLPLDYHDDDALKLAIKSTI 70 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHHHCc-------CEEEEEECCHHHHHHHHHHhh--cCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 57999999998876 999999987 899999999988877766553 134677888999999999998863
Q ss_pred -----cCeeEeccCCCCCCcHHHHHHHHHcCCc-----EEecCCcHHHHHH
Q 014694 89 -----TKLLLNCVGPYRLHGDPVAAACVHSGCD-----YLDISGEPEFMER 129 (420)
Q Consensus 89 -----~dvVIn~aGp~~~~~~~vv~Ac~~~g~~-----yvdisge~~~~~~ 129 (420)
.|++|+.+-.. ...++.++|.+.|++ ++++-|....-.+
T Consensus 71 ~~~g~id~lv~~vh~~--~~~~~~~~~~~~gv~~~~~~~~h~~gs~~~~~~ 119 (177)
T PRK08309 71 EKNGPFDLAVAWIHSS--AKDALSVVCRELDGSSETYRLFHVLGSAASDPR 119 (177)
T ss_pred HHcCCCeEEEEecccc--chhhHHHHHHHHccCCCCceEEEEeCCcCCchh
Confidence 46777776432 348999999999988 9999888775433
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=5.2e-08 Score=92.72 Aligned_cols=80 Identities=19% Similarity=0.155 Sum_probs=67.4
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-ccC
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-QTK 90 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-~~d 90 (420)
.|+|+||||++|+.++++|++.+ .+|++.+|+.++++++.+.... ...++.++.+|+.|++++.+++. +.|
T Consensus 4 ~vlVtGasg~iG~~ia~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~id 75 (257)
T PRK09291 4 TILITGAGSGFGREVALRLARKG-------HNVIAGVQIAPQVTALRAEAAR-RGLALRVEKLDLTDAIDRAQAAEWDVD 75 (257)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCcceEEEeeCCCHHHHHHHhcCCCC
Confidence 69999999999999999999987 7899999998877666554321 12357889999999999999887 899
Q ss_pred eeEeccCCC
Q 014694 91 LLLNCVGPY 99 (420)
Q Consensus 91 vVIn~aGp~ 99 (420)
+||||+|..
T Consensus 76 ~vi~~ag~~ 84 (257)
T PRK09291 76 VLLNNAGIG 84 (257)
T ss_pred EEEECCCcC
Confidence 999999964
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.9e-08 Score=95.08 Aligned_cols=83 Identities=10% Similarity=0.047 Sum_probs=69.4
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
...|+|+||+|++|++++++|++++ ++|++.+|+.++++...+++.. ...++.++.+|+.|++++.++++
T Consensus 6 ~~~ilItGasg~iG~~l~~~l~~~g-------~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~~~~~~~~~ 77 (251)
T PRK12826 6 GRVALVTGAARGIGRAIAVRLAADG-------AEVIVVDICGDDAAATAELVEA-AGGKARARQVDVRDRAALKAAVAAG 77 (251)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHH
Confidence 3579999999999999999999988 7899999998887776665532 22357889999999999999886
Q ss_pred -----ccCeeEeccCCCC
Q 014694 88 -----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (420)
.+|+|||++|...
T Consensus 78 ~~~~~~~d~vi~~ag~~~ 95 (251)
T PRK12826 78 VEDFGRLDILVANAGIFP 95 (251)
T ss_pred HHHhCCCCEEEECCCCCC
Confidence 5799999998754
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.82 E-value=2e-08 Score=98.44 Aligned_cols=82 Identities=13% Similarity=0.145 Sum_probs=69.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..|+|+||+|++|+.+++.|++++ ++|++.+|+.++++++.+++.. ...++.++.+|+.|++++.++++
T Consensus 41 k~vlItGasggIG~~la~~La~~G-------~~Vi~~~R~~~~l~~~~~~l~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~ 112 (293)
T PRK05866 41 KRILLTGASSGIGEAAAEQFARRG-------ATVVAVARREDLLDAVADRITR-AGGDAMAVPCDLSDLDAVDALVADVE 112 (293)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 469999999999999999999987 7999999999998887766531 12356788999999999999887
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
..|+||||+|...
T Consensus 113 ~~~g~id~li~~AG~~~ 129 (293)
T PRK05866 113 KRIGGVDILINNAGRSI 129 (293)
T ss_pred HHcCCCCEEEECCCCCC
Confidence 6899999999653
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.82 E-value=2.5e-08 Score=93.71 Aligned_cols=81 Identities=19% Similarity=0.154 Sum_probs=69.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..|+|+||||++|+.++++|++++ ++|++++|++++++++.+++.. ..++.++.+|+.|.+++.++++
T Consensus 7 ~~ilItGatg~iG~~la~~l~~~g-------~~V~~~~r~~~~~~~~~~~l~~--~~~~~~~~~D~~~~~~~~~~~~~~~ 77 (237)
T PRK07326 7 KVALITGGSKGIGFAIAEALLAEG-------YKVAITARDQKELEEAAAELNN--KGNVLGLAADVRDEADVQRAVDAIV 77 (237)
T ss_pred CEEEEECCCCcHHHHHHHHHHHCC-------CEEEEeeCCHHHHHHHHHHHhc--cCcEEEEEccCCCHHHHHHHHHHHH
Confidence 579999999999999999999887 7899999999988888777642 1467789999999999988876
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
.+|+|||++|+..
T Consensus 78 ~~~~~~d~vi~~ag~~~ 94 (237)
T PRK07326 78 AAFGGLDVLIANAGVGH 94 (237)
T ss_pred HHcCCCCEEEECCCCCC
Confidence 6899999999754
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.82 E-value=3.4e-08 Score=94.96 Aligned_cols=74 Identities=22% Similarity=0.233 Sum_probs=63.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~-- 88 (420)
..|+|+||||++|+.++++|++++ .+|++.+|+.++++. ..++.++.+|++|++++++++++
T Consensus 5 ~~vlVtGasg~iG~~~a~~l~~~g-------~~V~~~~r~~~~~~~---------~~~~~~~~~D~~d~~~~~~~~~~~~ 68 (270)
T PRK06179 5 KVALVTGASSGIGRATAEKLARAG-------YRVFGTSRNPARAAP---------IPGVELLELDVTDDASVQAAVDEVI 68 (270)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCC-------CEEEEEeCChhhccc---------cCCCeeEEeecCCHHHHHHHHHHHH
Confidence 469999999999999999999987 789999999776531 23578899999999999998875
Q ss_pred -----cCeeEeccCCCC
Q 014694 89 -----TKLLLNCVGPYR 100 (420)
Q Consensus 89 -----~dvVIn~aGp~~ 100 (420)
.|+||||+|...
T Consensus 69 ~~~g~~d~li~~ag~~~ 85 (270)
T PRK06179 69 ARAGRIDVLVNNAGVGL 85 (270)
T ss_pred HhCCCCCEEEECCCCCC
Confidence 599999999753
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=4.4e-08 Score=94.96 Aligned_cols=75 Identities=19% Similarity=0.147 Sum_probs=63.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..|+|+||+|++|+.++++|++++ ++|++.+|+.++++++.+ ..+.++.+|++|+++++++++
T Consensus 5 k~vlItGasggiG~~la~~l~~~G-------~~Vi~~~r~~~~~~~l~~-------~~~~~~~~Dl~d~~~~~~~~~~~~ 70 (277)
T PRK05993 5 RSILITGCSSGIGAYCARALQSDG-------WRVFATCRKEEDVAALEA-------EGLEAFQLDYAEPESIAALVAQVL 70 (277)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHH-------CCceEEEccCCCHHHHHHHHHHHH
Confidence 369999999999999999999987 799999999988866543 246788999999998888765
Q ss_pred -----ccCeeEeccCCC
Q 014694 88 -----QTKLLLNCVGPY 99 (420)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 71 ~~~~g~id~li~~Ag~~ 87 (277)
T PRK05993 71 ELSGGRLDALFNNGAYG 87 (277)
T ss_pred HHcCCCccEEEECCCcC
Confidence 359999999864
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=2.5e-08 Score=95.38 Aligned_cols=81 Identities=20% Similarity=0.262 Sum_probs=69.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~-- 88 (420)
++|+|+||+|++|+.++++|++++ .+|++.+|+.++++++.+++.. ..++.++.+|++|++++.+++++
T Consensus 3 ~~vlItGas~gIG~~la~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~i~~~~~~~~ 73 (257)
T PRK07024 3 LKVFITGASSGIGQALAREYARQG-------ATLGLVARRTDALQAFAARLPK--AARVSVYAADVRDADALAAAAADFI 73 (257)
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHhccc--CCeeEEEEcCCCCHHHHHHHHHHHH
Confidence 479999999999999999999987 7899999999998877776642 12678899999999999888764
Q ss_pred -----cCeeEeccCCCC
Q 014694 89 -----TKLLLNCVGPYR 100 (420)
Q Consensus 89 -----~dvVIn~aGp~~ 100 (420)
.|+|||++|...
T Consensus 74 ~~~g~id~lv~~ag~~~ 90 (257)
T PRK07024 74 AAHGLPDVVIANAGISV 90 (257)
T ss_pred HhCCCCCEEEECCCcCC
Confidence 699999999643
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=98.80 E-value=3.3e-08 Score=96.65 Aligned_cols=104 Identities=14% Similarity=0.210 Sum_probs=74.2
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh--hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc-
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~--~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~- 88 (420)
+|+|+|||||+|++++++|+++++ ..+|.+.+|.. .+.+. .+.+. ...++.++.+|+.|++++.+++++
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~-----~~~v~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~ 72 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHP-----DAEVIVLDKLTYAGNLEN-LADLE--DNPRYRFVKGDIGDRELVSRLFTEH 72 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCC-----CCEEEEecCCCcchhhhh-hhhhc--cCCCcEEEEcCCcCHHHHHHHHhhc
Confidence 489999999999999999998762 15787777632 12211 12221 123578899999999999999987
Q ss_pred -cCeeEeccCCCCCC----------------cHHHHHHHHHc--CCcEEecCCc
Q 014694 89 -TKLLLNCVGPYRLH----------------GDPVAAACVHS--GCDYLDISGE 123 (420)
Q Consensus 89 -~dvVIn~aGp~~~~----------------~~~vv~Ac~~~--g~~yvdisge 123 (420)
+|+|||+++..... ..+++++|.+. +.+++.+|..
T Consensus 73 ~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~ 126 (317)
T TIGR01181 73 QPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTD 126 (317)
T ss_pred CCCEEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeecc
Confidence 89999999975421 14677888775 3467777653
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=2.6e-08 Score=95.56 Aligned_cols=78 Identities=17% Similarity=0.219 Sum_probs=68.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|++|+.++++|++++ ++|++.+|+.++++++.++++ .++.++.+|++|++++.++++
T Consensus 7 k~vlItGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dl~~~~~~~~~~~~~~ 75 (261)
T PRK08265 7 KVAIVTGGATLIGAAVARALVAAG-------ARVAIVDIDADNGAAVAASLG----ERARFIATDITDDAAIERAVATVV 75 (261)
T ss_pred CEEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhC----CeeEEEEecCCCHHHHHHHHHHHH
Confidence 479999999999999999999988 799999999988888777653 357789999999999988876
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 76 ~~~g~id~lv~~ag~~ 91 (261)
T PRK08265 76 ARFGRVDILVNLACTY 91 (261)
T ss_pred HHhCCCCEEEECCCCC
Confidence 469999999964
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=6.1e-08 Score=93.35 Aligned_cols=81 Identities=21% Similarity=0.137 Sum_probs=68.7
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh----
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~---- 87 (420)
+|+|+||||++|+.++++|++++ .+|++.+|+.++++.+.+++.. ...++.++.+|+.|++++.++++
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g-------~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~ 73 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREG-------WRLALADVNEEGGEETLKLLRE-AGGDGFYQRCDVRDYSQLTALAQACEE 73 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 69999999999999999999987 7899999999988877766642 23457789999999999988776
Q ss_pred ---ccCeeEeccCCCC
Q 014694 88 ---QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ---~~dvVIn~aGp~~ 100 (420)
..|+|||++|...
T Consensus 74 ~~~~id~lI~~ag~~~ 89 (270)
T PRK05650 74 KWGGIDVIVNNAGVAS 89 (270)
T ss_pred HcCCCCEEEECCCCCC
Confidence 5799999999754
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=2.2e-08 Score=99.09 Aligned_cols=84 Identities=20% Similarity=0.164 Sum_probs=70.0
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHhc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~-~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
...++|+|||++||+.++++|++++ .+|++++|+.+++++..+++... ...++.++.+|+.|.++++++++.
T Consensus 14 gk~~lITGas~GIG~~~a~~La~~G-------~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~ 86 (313)
T PRK05854 14 GKRAVVTGASDGLGLGLARRLAAAG-------AEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQ 86 (313)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHH
Confidence 3579999999999999999999988 79999999999888877766321 123577899999999999988764
Q ss_pred -------cCeeEeccCCCC
Q 014694 89 -------TKLLLNCVGPYR 100 (420)
Q Consensus 89 -------~dvVIn~aGp~~ 100 (420)
.|++||+||...
T Consensus 87 ~~~~~~~iD~li~nAG~~~ 105 (313)
T PRK05854 87 LRAEGRPIHLLINNAGVMT 105 (313)
T ss_pred HHHhCCCccEEEECCcccc
Confidence 799999999643
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=2.3e-08 Score=95.62 Aligned_cols=79 Identities=15% Similarity=0.030 Sum_probs=68.3
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc---
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ--- 88 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~--- 88 (420)
.++|+||||++|+.++++|++++ .+|.+.+|+.++++++.+.+. ..++.++.+|++|.+++.+++++
T Consensus 3 ~vlItGasg~iG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~ 72 (260)
T PRK08267 3 SIFITGAASGIGRATALLFAAEG-------WRVGAYDINEAGLAALAAELG---AGNAWTGALDVTDRAAWDAALADFAA 72 (260)
T ss_pred EEEEeCCCchHHHHHHHHHHHCC-------CeEEEEeCCHHHHHHHHHHhc---CCceEEEEecCCCHHHHHHHHHHHHH
Confidence 59999999999999999999988 789999999999888877653 34678999999999999888764
Q ss_pred -----cCeeEeccCCCC
Q 014694 89 -----TKLLLNCVGPYR 100 (420)
Q Consensus 89 -----~dvVIn~aGp~~ 100 (420)
.|+||||+|...
T Consensus 73 ~~~~~id~vi~~ag~~~ 89 (260)
T PRK08267 73 ATGGRLDVLFNNAGILR 89 (260)
T ss_pred HcCCCCCEEEECCCCCC
Confidence 499999999643
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=98.79 E-value=3.7e-08 Score=95.32 Aligned_cols=80 Identities=13% Similarity=0.093 Sum_probs=68.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|+||+.++++|++++ ++|++.+|+.++.+++.+++. ...++.++.+|++|+++++++++
T Consensus 19 k~~lItGas~gIG~~la~~l~~~G-------~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~~ 89 (280)
T PLN02253 19 KVALVTGGATGIGESIVRLFHKHG-------AKVCIVDLQDDLGQNVCDSLG--GEPNVCFFHCDVTVEDDVSRAVDFTV 89 (280)
T ss_pred CEEEEECCCchHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHhc--CCCceEEEEeecCCHHHHHHHHHHHH
Confidence 479999999999999999999988 799999999888877777664 23457889999999999998887
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 90 ~~~g~id~li~~Ag~~ 105 (280)
T PLN02253 90 DKFGTLDIMVNNAGLT 105 (280)
T ss_pred HHhCCCCEEEECCCcC
Confidence 589999999964
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=2.7e-08 Score=93.44 Aligned_cols=76 Identities=18% Similarity=0.271 Sum_probs=65.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
|+++|+||+|++|+.+++.|++++ .+|++.+|+.++++++.+++ ++.++.+|++|+++++++++
T Consensus 1 m~vlItGas~giG~~ia~~l~~~g-------~~v~~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~v~~~~~~~~ 67 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRNDG-------HKVTLVGARRDDLEVAAKEL------DVDAIVCDNTDPASLEEARGLFP 67 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHhc------cCcEEecCCCCHHHHHHHHHHHh
Confidence 469999999999999999999987 79999999999987776654 35688999999999998876
Q ss_pred -ccCeeEeccCCC
Q 014694 88 -QTKLLLNCVGPY 99 (420)
Q Consensus 88 -~~dvVIn~aGp~ 99 (420)
..|++||++|+.
T Consensus 68 ~~id~lv~~ag~~ 80 (223)
T PRK05884 68 HHLDTIVNVPAPS 80 (223)
T ss_pred hcCcEEEECCCcc
Confidence 479999999863
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=2.6e-08 Score=95.33 Aligned_cols=80 Identities=24% Similarity=0.250 Sum_probs=69.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
|+++|+||+|.+|+.++++|++++ ++|++.+|+++++++..+++.. ..++.++.+|++|+++++++++
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~~~l~~--~~~~~~~~~Dv~d~~~~~~~~~~~~ 71 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKG-------ARVVISSRNEENLEKALKELKE--YGEVYAVKADLSDKDDLKNLVKEAW 71 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHHHh--cCCceEEEcCCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 7899999999998888777742 2357789999999999998875
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 72 ~~~g~id~li~naG~~ 87 (259)
T PRK08340 72 ELLGGIDALVWNAGNV 87 (259)
T ss_pred HhcCCCCEEEECCCCC
Confidence 479999999964
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=3.2e-08 Score=94.33 Aligned_cols=81 Identities=21% Similarity=0.246 Sum_probs=68.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~-- 88 (420)
.+|+|+||+|++|+.++++|++++ ++|++.+|++++++++.+++.. ...++.++.+|+.|++++++++++
T Consensus 11 k~vlItGa~g~iG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~i~~-~~~~~~~~~~D~~~~~~~~~~~~~~~ 82 (255)
T PRK07523 11 RRALVTGSSQGIGYALAEGLAQAG-------AEVILNGRDPAKLAAAAESLKG-QGLSAHALAFDVTDHDAVRAAIDAFE 82 (255)
T ss_pred CEEEEECCcchHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHHHh-cCceEEEEEccCCCHHHHHHHHHHHH
Confidence 479999999999999999999988 7999999999888777776642 123577889999999999998864
Q ss_pred -----cCeeEeccCCC
Q 014694 89 -----TKLLLNCVGPY 99 (420)
Q Consensus 89 -----~dvVIn~aGp~ 99 (420)
.|+|||++|..
T Consensus 83 ~~~~~~d~li~~ag~~ 98 (255)
T PRK07523 83 AEIGPIDILVNNAGMQ 98 (255)
T ss_pred HhcCCCCEEEECCCCC
Confidence 69999999965
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.78 E-value=7.9e-08 Score=91.04 Aligned_cols=81 Identities=15% Similarity=0.052 Sum_probs=64.4
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh-HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT-RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~-kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..++|+||+|++|++++++|++++ ++|++.+|+.+ +++.+.+++.. ...++.++.+|++|++++.++++
T Consensus 7 k~vlItGasggiG~~l~~~l~~~G-------~~V~~~~r~~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 78 (248)
T PRK07806 7 KTALVTGSSRGIGADTAKILAGAG-------AHVVVNYRQKAPRANKVVAEIEA-AGGRASAVGADLTDEESVAALMDTA 78 (248)
T ss_pred cEEEEECCCCcHHHHHHHHHHHCC-------CEEEEEeCCchHhHHHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHHH
Confidence 479999999999999999999987 78988899753 45555554431 12356788999999999988876
Q ss_pred -----ccCeeEeccCCC
Q 014694 88 -----QTKLLLNCVGPY 99 (420)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (420)
+.|+|||++|..
T Consensus 79 ~~~~~~~d~vi~~ag~~ 95 (248)
T PRK07806 79 REEFGGLDALVLNASGG 95 (248)
T ss_pred HHhCCCCcEEEECCCCC
Confidence 479999999864
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.78 E-value=3.6e-08 Score=95.48 Aligned_cols=78 Identities=17% Similarity=0.063 Sum_probs=66.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..|+|+||+|++|++++++|++++ .+|++.+|+.++++.+.+.. ..++..+.+|++|++++.++++
T Consensus 5 ~~vlVtGasggiG~~la~~l~~~G-------~~V~~~~r~~~~~~~l~~~~----~~~~~~~~~D~~d~~~~~~~~~~~~ 73 (277)
T PRK06180 5 KTWLITGVSSGFGRALAQAALAAG-------HRVVGTVRSEAARADFEALH----PDRALARLLDVTDFDAIDAVVADAE 73 (277)
T ss_pred CEEEEecCCChHHHHHHHHHHhCc-------CEEEEEeCCHHHHHHHHhhc----CCCeeEEEccCCCHHHHHHHHHHHH
Confidence 469999999999999999999987 78999999998887665532 2357788999999999988877
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
.+|+|||++|..
T Consensus 74 ~~~~~~d~vv~~ag~~ 89 (277)
T PRK06180 74 ATFGPIDVLVNNAGYG 89 (277)
T ss_pred HHhCCCCEEEECCCcc
Confidence 479999999974
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.78 E-value=3.6e-08 Score=93.92 Aligned_cols=81 Identities=17% Similarity=0.147 Sum_probs=69.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|++|+.++++|++++ .+|++++|+.++++++.+++.. ...++.++.+|+.|+++++++++
T Consensus 7 k~~lItGas~giG~~ia~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~ 78 (254)
T PRK07478 7 KVAIITGASSGIGRAAAKLFAREG-------AKVVVGARRQAELDQLVAEIRA-EGGEAVALAGDVRDEAYAKALVALAV 78 (254)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 479999999999999999999988 7899999999998888776642 12357788999999999988876
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 79 ~~~~~id~li~~ag~~ 94 (254)
T PRK07478 79 ERFGGLDIAFNNAGTL 94 (254)
T ss_pred HhcCCCCEEEECCCCC
Confidence 579999999964
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.78 E-value=2.2e-08 Score=95.31 Aligned_cols=82 Identities=17% Similarity=0.112 Sum_probs=68.7
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
...|+|+||+|+||+.++++|++++ ++|++.+|++++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 5 ~k~vlItGa~~~IG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 76 (258)
T PRK07890 5 GKVVVVSGVGPGLGRTLAVRAARAG-------ADVVLAARTAERLDEVAAEIDD-LGRRALAVPTDITDEDQCANLVALA 76 (258)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHHHH-hCCceEEEecCCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 7999999999888777766531 12457789999999999988775
Q ss_pred -----ccCeeEeccCCC
Q 014694 88 -----QTKLLLNCVGPY 99 (420)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (420)
+.|+|||++|..
T Consensus 77 ~~~~g~~d~vi~~ag~~ 93 (258)
T PRK07890 77 LERFGRVDALVNNAFRV 93 (258)
T ss_pred HHHcCCccEEEECCccC
Confidence 469999999864
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.78 E-value=7.6e-08 Score=89.61 Aligned_cols=77 Identities=23% Similarity=0.280 Sum_probs=65.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
++++|+||+|++|+.++++|+++ ++|.+.+|+.++++++.++. ..+.++.+|+.|++++.++++
T Consensus 4 ~~vlVtG~~g~iG~~l~~~l~~~--------~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~ 70 (227)
T PRK08219 4 PTALITGASRGIGAAIARELAPT--------HTLLLGGRPAERLDELAAEL-----PGATPFPVDLTDPEAIAAAVEQLG 70 (227)
T ss_pred CEEEEecCCcHHHHHHHHHHHhh--------CCEEEEeCCHHHHHHHHHHh-----ccceEEecCCCCHHHHHHHHHhcC
Confidence 47999999999999999999986 36889999988876665543 257889999999999999887
Q ss_pred ccCeeEeccCCCC
Q 014694 88 QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ~~dvVIn~aGp~~ 100 (420)
+.|+|||++|...
T Consensus 71 ~id~vi~~ag~~~ 83 (227)
T PRK08219 71 RLDVLVHNAGVAD 83 (227)
T ss_pred CCCEEEECCCcCC
Confidence 4899999999754
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.78 E-value=3.5e-08 Score=94.07 Aligned_cols=82 Identities=15% Similarity=0.118 Sum_probs=69.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|++|+.++++|++++ .+|++.+|+.++++++.+++.. ...++..+.+|++|+++++++++
T Consensus 10 k~vlVtGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (253)
T PRK05867 10 KRALITGASTGIGKRVALAYVEAG-------AQVAIAARHLDALEKLADEIGT-SGGKVVPVCCDVSQHQQVTSMLDQVT 81 (253)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC-------CEEEEEcCCHHHHHHHHHHHHh-cCCeEEEEEccCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 7899999999998888777642 12356788999999999988876
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
..|+|||++|...
T Consensus 82 ~~~g~id~lv~~ag~~~ 98 (253)
T PRK05867 82 AELGGIDIAVCNAGIIT 98 (253)
T ss_pred HHhCCCCEEEECCCCCC
Confidence 5799999999754
|
|
| >KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.78 E-value=2.3e-08 Score=96.71 Aligned_cols=113 Identities=16% Similarity=0.101 Sum_probs=83.0
Q ss_pred EEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHH----HHHHHhc
Q 014694 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPS----LHRLCSQ 88 (420)
Q Consensus 13 IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~s----l~~~~~~ 88 (420)
.+|+|||..||+..+++|+++| ++|.+++|+++||+++.+++......++.++.+|.++.+. +++.+.+
T Consensus 52 AVVTGaTDGIGKayA~eLAkrG-------~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~ 124 (312)
T KOG1014|consen 52 AVVTGATDGIGKAYARELAKRG-------FNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAG 124 (312)
T ss_pred EEEECCCCcchHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcC
Confidence 7999999999999999999998 8999999999999999998864223457889999987664 6666666
Q ss_pred cC--eeEeccCCCCCCcHHHHHHHHHcCCc--EEecCCcHHHHHHHHH
Q 014694 89 TK--LLLNCVGPYRLHGDPVAAACVHSGCD--YLDISGEPEFMERMEA 132 (420)
Q Consensus 89 ~d--vVIn~aGp~~~~~~~vv~Ac~~~g~~--yvdisge~~~~~~~~~ 132 (420)
.| ++|||+|....+.+...+.-...-.. -|.+.+.....+.++.
T Consensus 125 ~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp 172 (312)
T KOG1014|consen 125 LDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILP 172 (312)
T ss_pred CceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhh
Confidence 55 69999998776655555443322123 4444454445454443
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.78 E-value=2.7e-08 Score=96.55 Aligned_cols=81 Identities=12% Similarity=0.158 Sum_probs=68.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~-- 88 (420)
..++|+||+|++|+.+++.|++++ ++|++++|+.++++++.+++.. ...++.++.+|++|++++.+++++
T Consensus 7 k~vlVTGas~gIG~ala~~La~~G-------~~Vv~~~r~~~~l~~~~~~l~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~ 78 (275)
T PRK05876 7 RGAVITGGASGIGLATGTEFARRG-------ARVVLGDVDKPGLRQAVNHLRA-EGFDVHGVMCDVRHREEVTHLADEAF 78 (275)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEeCCCCCHHHHHHHHHHHH
Confidence 469999999999999999999998 7899999999988887776642 123567789999999999988764
Q ss_pred -----cCeeEeccCCC
Q 014694 89 -----TKLLLNCVGPY 99 (420)
Q Consensus 89 -----~dvVIn~aGp~ 99 (420)
.|+|||++|..
T Consensus 79 ~~~g~id~li~nAg~~ 94 (275)
T PRK05876 79 RLLGHVDVVFSNAGIV 94 (275)
T ss_pred HHcCCCCEEEECCCcC
Confidence 69999999963
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.77 E-value=3.4e-08 Score=93.23 Aligned_cols=83 Identities=18% Similarity=0.145 Sum_probs=65.2
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC-hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs-~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
..+|+|+||+|++|++++++|++++ ++|++.+|+ .++++.+.+.+.......+.++.+|++|.+++.++++.
T Consensus 6 ~~~vlItGa~g~iG~~l~~~l~~~g-------~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 78 (249)
T PRK09135 6 AKVALITGGARRIGAAIARTLHAAG-------YRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAA 78 (249)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHH
Confidence 3579999999999999999999987 789999986 45555555444210123467889999999999988874
Q ss_pred -------cCeeEeccCCC
Q 014694 89 -------TKLLLNCVGPY 99 (420)
Q Consensus 89 -------~dvVIn~aGp~ 99 (420)
+|+|||++|..
T Consensus 79 ~~~~~~~~d~vi~~ag~~ 96 (249)
T PRK09135 79 CVAAFGRLDALVNNASSF 96 (249)
T ss_pred HHHHcCCCCEEEECCCCC
Confidence 69999999964
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.77 E-value=4.6e-08 Score=93.90 Aligned_cols=82 Identities=15% Similarity=0.174 Sum_probs=68.6
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
...++|+||+|++|++++++|++++ ++|++++|+.++++++.+.+.. ...++.++.+|++|++++.++++
T Consensus 10 ~~~vlItGasggIG~~~a~~l~~~G-------~~Vi~~~r~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 81 (263)
T PRK07814 10 DQVAVVTGAGRGLGAAIALAFAEAG-------ADVLIAARTESQLDEVAEQIRA-AGRRAHVVAADLAHPEATAGLAGQA 81 (263)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHH
Confidence 3579999999999999999999987 7999999999888777766531 12457788999999999988776
Q ss_pred -----ccCeeEeccCCC
Q 014694 88 -----QTKLLLNCVGPY 99 (420)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (420)
+.|+|||+||..
T Consensus 82 ~~~~~~id~vi~~Ag~~ 98 (263)
T PRK07814 82 VEAFGRLDIVVNNVGGT 98 (263)
T ss_pred HHHcCCCCEEEECCCCC
Confidence 579999999863
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=98.76 E-value=4.9e-08 Score=106.36 Aligned_cols=107 Identities=14% Similarity=0.258 Sum_probs=79.2
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh--hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~--~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
+.++|+|+|||||||++++++|++++. .++|.+.+|.. ++++.+.... ...++.++.+|+.|.+.+.+++
T Consensus 5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~-----~~~V~~~d~~~~~~~~~~l~~~~---~~~~v~~~~~Dl~d~~~~~~~~ 76 (668)
T PLN02260 5 EPKNILITGAAGFIASHVANRLIRNYP-----DYKIVVLDKLDYCSNLKNLNPSK---SSPNFKFVKGDIASADLVNYLL 76 (668)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHhCC-----CCEEEEEeCCCccchhhhhhhcc---cCCCeEEEECCCCChHHHHHHH
Confidence 456899999999999999999999852 17888888742 2332222111 1246788999999999888775
Q ss_pred --hccCeeEeccCCCCCC----------------cHHHHHHHHHcC-C-cEEecCCc
Q 014694 87 --SQTKLLLNCVGPYRLH----------------GDPVAAACVHSG-C-DYLDISGE 123 (420)
Q Consensus 87 --~~~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g-~-~yvdisge 123 (420)
.++|+|||+|+..... ..+++++|.+.+ + ++|.+|..
T Consensus 77 ~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~ 133 (668)
T PLN02260 77 ITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTD 133 (668)
T ss_pred hhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcch
Confidence 5799999999975421 156899999987 4 68887753
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.76 E-value=4.2e-08 Score=92.92 Aligned_cols=81 Identities=19% Similarity=0.193 Sum_probs=67.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
.+++|+||+|++|++++++|++++ .+|++.+|+.++++.+.+++.. ...++.++.+|++|.++++++++
T Consensus 7 k~vlItGasg~iG~~la~~l~~~g-------~~vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~ 78 (250)
T PRK07774 7 KVAIVTGAAGGIGQAYAEALAREG-------ASVVVADINAEGAERVAKQIVA-DGGTAIAVQVDVSDPDSAKAMADATV 78 (250)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 479999999999999999999987 7899999998887776665531 12346678999999999888776
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 79 ~~~~~id~vi~~ag~~ 94 (250)
T PRK07774 79 SAFGGIDYLVNNAAIY 94 (250)
T ss_pred HHhCCCCEEEECCCCc
Confidence 469999999964
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.76 E-value=4.6e-08 Score=92.35 Aligned_cols=82 Identities=20% Similarity=0.150 Sum_probs=68.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|++|+.++++|++++ .+|++++|+.++++.+.+++.. ...++.++.+|++|.+++.++++
T Consensus 7 k~vlItG~sg~iG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~ 78 (241)
T PRK07454 7 PRALITGASSGIGKATALAFAKAG-------WDLALVARSQDALEALAAELRS-TGVKAAAYSIDLSNPEAIAPGIAELL 78 (241)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-CCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 479999999999999999999988 7899999999888777665531 12457789999999999888776
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
..|+|||++|...
T Consensus 79 ~~~~~id~lv~~ag~~~ 95 (241)
T PRK07454 79 EQFGCPDVLINNAGMAY 95 (241)
T ss_pred HHcCCCCEEEECCCccC
Confidence 4799999999653
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=98.76 E-value=3.4e-08 Score=98.92 Aligned_cols=79 Identities=15% Similarity=0.248 Sum_probs=58.1
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcce-EEEEecChhH--HHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKS-LALAGRNPTR--VKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~-v~iagRs~~k--l~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
+|+|+|||||+|+++++.|++++ ++ +++.+|...+ ...+. .+. ...++.++.+|+.|.+++.+++++
T Consensus 3 ~vlVtGatGfIG~~l~~~L~~~g-------~~~v~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~Dl~d~~~~~~~~~~ 72 (355)
T PRK10217 3 KILITGGAGFIGSALVRYIINET-------SDAVVVVDKLTYAGNLMSLA-PVA--QSERFAFEKVDICDRAELARVFTE 72 (355)
T ss_pred EEEEEcCCcHHHHHHHHHHHHcC-------CCEEEEEecCccccchhhhh-hcc--cCCceEEEECCCcChHHHHHHHhh
Confidence 79999999999999999999987 44 4455554321 11111 111 123567889999999999999985
Q ss_pred --cCeeEeccCCCC
Q 014694 89 --TKLLLNCVGPYR 100 (420)
Q Consensus 89 --~dvVIn~aGp~~ 100 (420)
+|+||||||...
T Consensus 73 ~~~D~Vih~A~~~~ 86 (355)
T PRK10217 73 HQPDCVMHLAAESH 86 (355)
T ss_pred cCCCEEEECCcccC
Confidence 899999999753
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.76 E-value=4.2e-08 Score=97.97 Aligned_cols=81 Identities=21% Similarity=0.240 Sum_probs=69.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|+||+.+++.|++++ .+|++++|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 8 k~vlITGAs~GIG~aia~~la~~G-------~~Vvl~~R~~~~l~~~~~~~~~-~g~~~~~~~~Dv~d~~~v~~~~~~~~ 79 (330)
T PRK06139 8 AVVVITGASSGIGQATAEAFARRG-------ARLVLAARDEEALQAVAEECRA-LGAEVLVVPTDVTDADQVKALATQAA 79 (330)
T ss_pred CEEEEcCCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEeeCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 7899999999999888776642 23456778999999999999874
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
..|++|||+|..
T Consensus 80 ~~~g~iD~lVnnAG~~ 95 (330)
T PRK06139 80 SFGGRIDVWVNNVGVG 95 (330)
T ss_pred HhcCCCCEEEECCCcC
Confidence 579999999953
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.75 E-value=4.7e-08 Score=106.05 Aligned_cols=102 Identities=17% Similarity=0.280 Sum_probs=74.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh--HHHHHHHHhCCCCCCCccEEEEeCCCH------HHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT--RVKQALQWASPSHSLSIPILTADTTDP------PSL 82 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~--kl~~~~~~l~~~~~~~~~~i~~D~~d~------~sl 82 (420)
|+|+|+|||||+|++++++|+++.. ..+|.+.+|+.. +++.+..... ..+++++.+|+.|+ +.+
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~-----g~~V~~l~R~~~~~~~~~~~~~~~---~~~v~~~~~Dl~~~~~~~~~~~~ 72 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRR-----EATVHVLVRRQSLSRLEALAAYWG---ADRVVPLVGDLTEPGLGLSEADI 72 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCC-----CCEEEEEECcchHHHHHHHHHhcC---CCcEEEEecccCCccCCcCHHHH
Confidence 4799999999999999999995321 178999999653 3333333221 24678899999984 466
Q ss_pred HHHHhccCeeEeccCCCCCC-------------cHHHHHHHHHcCC-cEEecC
Q 014694 83 HRLCSQTKLLLNCVGPYRLH-------------GDPVAAACVHSGC-DYLDIS 121 (420)
Q Consensus 83 ~~~~~~~dvVIn~aGp~~~~-------------~~~vv~Ac~~~g~-~yvdis 121 (420)
+++ +++|+||||||.+... ..+++++|.+.++ ++|.+|
T Consensus 73 ~~l-~~~D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~S 124 (657)
T PRK07201 73 AEL-GDIDHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQAATFHHVS 124 (657)
T ss_pred HHh-cCCCEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEe
Confidence 666 8999999999965421 2678899999876 466655
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.75 E-value=5.3e-08 Score=107.35 Aligned_cols=96 Identities=17% Similarity=0.185 Sum_probs=78.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
|+|+|+|||||+|++++++|++++ ++|.+.+|+.... + ..++.++.+|+.|.+++.++++++|
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G-------~~Vv~l~R~~~~~------~----~~~v~~v~gDL~D~~~l~~al~~vD 63 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQG-------HEVVGIARHRPDS------W----PSSADFIAADIRDATAVESAMTGAD 63 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCc-------CEEEEEECCchhh------c----ccCceEEEeeCCCHHHHHHHHhCCC
Confidence 479999999999999999999987 7899999975321 1 1256789999999999999999999
Q ss_pred eeEeccCCCCCC-------cHHHHHHHHHcCC-cEEecCCc
Q 014694 91 LLLNCVGPYRLH-------GDPVAAACVHSGC-DYLDISGE 123 (420)
Q Consensus 91 vVIn~aGp~~~~-------~~~vv~Ac~~~g~-~yvdisge 123 (420)
+|||||+..... ..+++++|.++++ ++|.+|..
T Consensus 64 ~VVHlAa~~~~~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~ 104 (854)
T PRK05865 64 VVAHCAWVRGRNDHINIDGTANVLKAMAETGTGRIVFTSSG 104 (854)
T ss_pred EEEECCCcccchHHHHHHHHHHHHHHHHHcCCCeEEEECCc
Confidence 999999864321 2678999999987 67777754
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.75 E-value=6.5e-08 Score=92.73 Aligned_cols=79 Identities=15% Similarity=0.140 Sum_probs=68.3
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
...++|+||+|+||+.++++|++++ ++|++.+|+.++++++.+++. .++.++.+|++|+++++++++
T Consensus 6 ~k~vlVtGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~ 74 (263)
T PRK06200 6 GQVALITGGGSGIGRALVERFLAEG-------ARVAVLERSAEKLASLRQRFG----DHVLVVEGDVTSYADNQRAVDQT 74 (263)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhC----CcceEEEccCCCHHHHHHHHHHH
Confidence 3479999999999999999999988 789999999999888776653 357789999999999988876
Q ss_pred -----ccCeeEeccCCC
Q 014694 88 -----QTKLLLNCVGPY 99 (420)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 75 ~~~~g~id~li~~ag~~ 91 (263)
T PRK06200 75 VDAFGKLDCFVGNAGIW 91 (263)
T ss_pred HHhcCCCCEEEECCCCc
Confidence 469999999974
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.75 E-value=7.9e-08 Score=92.23 Aligned_cols=106 Identities=16% Similarity=0.215 Sum_probs=79.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC--hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN--PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs--~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
++++|+||.||||+..+++++++.+. .+|+..+.- ..+++.+..-. ..++..++++|+.|.+.+.++++
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d-----~~v~~~DkLTYAgn~~~l~~~~---~~~~~~fv~~DI~D~~~v~~~~~~ 72 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPD-----DHVVNLDKLTYAGNLENLADVE---DSPRYRFVQGDICDRELVDRLFKE 72 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCC-----ceEEEEecccccCCHHHHHhhh---cCCCceEEeccccCHHHHHHHHHh
Confidence 47999999999999999999998742 567776651 12332322211 24678999999999999999999
Q ss_pred -ccCeeEeccCCCCCC---------------c-HHHHHHHHHcCC--cEEecCCcH
Q 014694 88 -QTKLLLNCVGPYRLH---------------G-DPVAAACVHSGC--DYLDISGEP 124 (420)
Q Consensus 88 -~~dvVIn~aGp~~~~---------------~-~~vv~Ac~~~g~--~yvdisge~ 124 (420)
+.|+|+|.|+-.+.. | -++++|+.+... +|+++|-+-
T Consensus 73 ~~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDE 128 (340)
T COG1088 73 YQPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDE 128 (340)
T ss_pred cCCCeEEEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEecccc
Confidence 589999999865532 1 677888888774 788887443
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=98.75 E-value=4.2e-08 Score=92.21 Aligned_cols=81 Identities=15% Similarity=0.114 Sum_probs=67.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~-- 88 (420)
++|+|+||+|++|+.++++|++++ ++|++.+|+.++++.+.+++.. ...++.++.+|+.|++++.+++++
T Consensus 6 ~~ilItGasg~iG~~l~~~l~~~g-------~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~ 77 (246)
T PRK05653 6 KTALVTGASRGIGRAIALRLAADG-------AKVVIYDSNEEAAEALAAELRA-AGGEARVLVFDVSDEAAVRALIEAAV 77 (246)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCChhHHHHHHHHHHh-cCCceEEEEccCCCHHHHHHHHHHHH
Confidence 479999999999999999999987 7899999999887776665531 234677888999999999888764
Q ss_pred -----cCeeEeccCCC
Q 014694 89 -----TKLLLNCVGPY 99 (420)
Q Consensus 89 -----~dvVIn~aGp~ 99 (420)
+|+|||++|..
T Consensus 78 ~~~~~id~vi~~ag~~ 93 (246)
T PRK05653 78 EAFGALDILVNNAGIT 93 (246)
T ss_pred HHhCCCCEEEECCCcC
Confidence 49999999864
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=5.9e-08 Score=92.61 Aligned_cols=78 Identities=19% Similarity=0.216 Sum_probs=68.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|++|+.++++|++++ ++|++++|+.++++++.+++. .++.++.+|++|++++.++++
T Consensus 7 ~~vlItGas~~iG~~ia~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~ 75 (257)
T PRK07067 7 KVALLTGAASGIGEAVAERYLAEG-------ARVVIADIKPARARLAALEIG----PAAIAVSLDVTRQDSIDRIVAAAV 75 (257)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcC-------CEEEEEcCCHHHHHHHHHHhC----CceEEEEccCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 799999999998888777653 357788999999999998877
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 76 ~~~~~id~li~~ag~~ 91 (257)
T PRK07067 76 ERFGGIDILFNNAALF 91 (257)
T ss_pred HHcCCCCEEEECCCcC
Confidence 479999999864
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=3.2e-08 Score=93.67 Aligned_cols=81 Identities=19% Similarity=0.235 Sum_probs=67.5
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc---
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ--- 88 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~--- 88 (420)
+++|+||||++|+.++++|++++ ++|++++|+.++++.+.+++......++.++.+|++|++++.++++.
T Consensus 3 ~vlItGas~giG~~~a~~l~~~G-------~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 75 (243)
T PRK07102 3 KILIIGATSDIARACARRYAAAG-------ARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPA 75 (243)
T ss_pred EEEEEcCCcHHHHHHHHHHHhcC-------CEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhh
Confidence 69999999999999999999987 78999999998887766655311134678899999999999888764
Q ss_pred -cCeeEeccCCC
Q 014694 89 -TKLLLNCVGPY 99 (420)
Q Consensus 89 -~dvVIn~aGp~ 99 (420)
.|+|||++|..
T Consensus 76 ~~d~vv~~ag~~ 87 (243)
T PRK07102 76 LPDIVLIAVGTL 87 (243)
T ss_pred cCCEEEECCcCC
Confidence 59999999864
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=5.2e-08 Score=92.31 Aligned_cols=80 Identities=14% Similarity=0.088 Sum_probs=68.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|++|+.++++|++++ .+|++.+|+.++++...+++. ...++.++.+|++|++++.++++
T Consensus 6 k~~lItG~sg~iG~~la~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~i~ 76 (252)
T PRK06138 6 RVAIVTGAGSGIGRATAKLFAREG-------ARVVVADRDAEAAERVAAAIA--AGGRAFARQGDVGSAEAVEALVDFVA 76 (252)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCC-------CeEEEecCCHHHHHHHHHHHh--cCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 479999999999999999999987 789999999988877766653 13457889999999999998876
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 77 ~~~~~id~vi~~ag~~ 92 (252)
T PRK06138 77 ARWGRLDVLVNNAGFG 92 (252)
T ss_pred HHcCCCCEEEECCCCC
Confidence 579999999964
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=4.9e-08 Score=92.06 Aligned_cols=82 Identities=21% Similarity=0.211 Sum_probs=68.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|++|+.++++|++++ .+|++.+|+.++++++.+++.. ...++.++.+|++|++++.++++
T Consensus 8 ~~vlVtG~sg~iG~~l~~~L~~~G-------~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~ 79 (239)
T PRK07666 8 KNALITGAGRGIGRAVAIALAKEG-------VNVGLLARTEENLKAVAEEVEA-YGVKVVIATADVSDYEEVTAAIEQLK 79 (239)
T ss_pred CEEEEEcCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHH-hCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 469999999999999999999987 7999999999888777666531 22357788999999999988886
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
++|+|||++|...
T Consensus 80 ~~~~~id~vi~~ag~~~ 96 (239)
T PRK07666 80 NELGSIDILINNAGISK 96 (239)
T ss_pred HHcCCccEEEEcCcccc
Confidence 6899999999743
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=6.2e-08 Score=93.29 Aligned_cols=82 Identities=18% Similarity=0.156 Sum_probs=69.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|.||+.+++.|++++ ++|++.+|+.++++++.+++......++.++.+|++|+++++++++
T Consensus 9 k~~lItGas~gIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~ 81 (263)
T PRK08339 9 KLAFTTASSKGIGFGVARVLARAG-------ADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK 81 (263)
T ss_pred CEEEEeCCCCcHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence 368999999999999999999998 7999999999998887776632112457789999999999999886
Q ss_pred ---ccCeeEeccCCC
Q 014694 88 ---QTKLLLNCVGPY 99 (420)
Q Consensus 88 ---~~dvVIn~aGp~ 99 (420)
..|++||++|..
T Consensus 82 ~~g~iD~lv~nag~~ 96 (263)
T PRK08339 82 NIGEPDIFFFSTGGP 96 (263)
T ss_pred hhCCCcEEEECCCCC
Confidence 479999999964
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=98.73 E-value=6.9e-08 Score=94.72 Aligned_cols=103 Identities=17% Similarity=0.274 Sum_probs=74.1
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--cc
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--QT 89 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--~~ 89 (420)
+|+|+||||++|+.+++.|++++ ++|.+.+|...........+. ...++.++.+|+.|++++.++++ +.
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g-------~~V~~~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~ 71 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESG-------HEVVVLDNLSNGSPEALKRGE--RITRVTFVEGDLRDRELLDRLFEEHKI 71 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCC-------CeEEEEeCCCccchhhhhhhc--cccceEEEECCCCCHHHHHHHHHhCCC
Confidence 58999999999999999999987 678777664322111122221 01246788899999999999987 68
Q ss_pred CeeEeccCCCCCC----------------cHHHHHHHHHcCC-cEEecCCc
Q 014694 90 KLLLNCVGPYRLH----------------GDPVAAACVHSGC-DYLDISGE 123 (420)
Q Consensus 90 dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~-~yvdisge 123 (420)
|+|||++|+.... ..+++++|.+.+. ++|.+|+.
T Consensus 72 d~vv~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~ 122 (328)
T TIGR01179 72 DAVIHFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSA 122 (328)
T ss_pred cEEEECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecch
Confidence 9999999964221 1567788888876 56666653
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.73 E-value=6.7e-08 Score=91.88 Aligned_cols=82 Identities=17% Similarity=0.179 Sum_probs=66.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEE-EecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLAL-AGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~i-agRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..|+|+||+|++|++++++|++++ .++++ ..|+.+++++..+++.. ...++.++.+|++|++++.++++
T Consensus 7 ~~ilItGasg~iG~~la~~l~~~G-------~~v~i~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~i~~~~~~~ 78 (254)
T PRK12746 7 KVALVTGASRGIGRAIAMRLANDG-------ALVAIHYGRNKQAADETIREIES-NGGKAFLIEADLNSIDGVKKLVEQL 78 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEcCCCHHHHHHHHHHHHh-cCCcEEEEEcCcCCHHHHHHHHHHH
Confidence 579999999999999999999987 67766 47888887777665531 12356788999999999988776
Q ss_pred -----------ccCeeEeccCCCC
Q 014694 88 -----------QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----------~~dvVIn~aGp~~ 100 (420)
++|+|||++|...
T Consensus 79 ~~~~~~~~~~~~id~vi~~ag~~~ 102 (254)
T PRK12746 79 KNELQIRVGTSEIDILVNNAGIGT 102 (254)
T ss_pred HHHhccccCCCCccEEEECCCCCC
Confidence 4799999999643
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.72 E-value=6.4e-08 Score=92.54 Aligned_cols=82 Identities=20% Similarity=0.180 Sum_probs=69.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~-~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..++|+||+|++|+.++++|++++ .+|++.+|+.++++++.+++... ...++.++.+|++|++++.++++
T Consensus 8 k~vlVtGas~gIG~~~a~~l~~~G-------~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 80 (260)
T PRK07063 8 KVALVTGAAQGIGAAIARAFAREG-------AAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAA 80 (260)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHH
Confidence 479999999999999999999998 78999999999988887776420 12356789999999999988876
Q ss_pred -----ccCeeEeccCCC
Q 014694 88 -----QTKLLLNCVGPY 99 (420)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 81 ~~~~g~id~li~~ag~~ 97 (260)
T PRK07063 81 EEAFGPLDVLVNNAGIN 97 (260)
T ss_pred HHHhCCCcEEEECCCcC
Confidence 579999999964
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.72 E-value=6.9e-08 Score=92.14 Aligned_cols=81 Identities=14% Similarity=0.212 Sum_probs=68.3
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
+..+++|+||+|++|+.++++|++++ ++|.+++|+.+.++.+.++.. ..++.++.+|+.|++++.++++
T Consensus 10 ~~~~vlItGa~g~iG~~~a~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~ 79 (264)
T PRK12829 10 DGLRVLVTGGASGIGRAIAEAFAEAG-------ARVHVCDVSEAALAATAARLP---GAKVTATVADVADPAQVERVFDT 79 (264)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHh---cCceEEEEccCCCHHHHHHHHHH
Confidence 34689999999999999999999987 789999999888877766553 1256789999999999988775
Q ss_pred ------ccCeeEeccCCC
Q 014694 88 ------QTKLLLNCVGPY 99 (420)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (420)
++|+|||++|..
T Consensus 80 ~~~~~~~~d~vi~~ag~~ 97 (264)
T PRK12829 80 AVERFGGLDVLVNNAGIA 97 (264)
T ss_pred HHHHhCCCCEEEECCCCC
Confidence 579999999975
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.72 E-value=7.5e-08 Score=91.65 Aligned_cols=83 Identities=19% Similarity=0.152 Sum_probs=69.6
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
...|+|+||+|++|+++++.|++++ ++|++++|+.++++.+.+++.. ...++.++.+|++|++++.++++
T Consensus 9 ~k~ilItGasg~IG~~~a~~l~~~G-------~~Vi~~~r~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (258)
T PRK06949 9 GKVALVTGASSGLGARFAQVLAQAG-------AKVVLASRRVERLKELRAEIEA-EGGAAHVVSLDVTDYQSIKAAVAHA 80 (258)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHH
Confidence 3579999999999999999999987 7899999999998877766531 12357789999999999999877
Q ss_pred -----ccCeeEeccCCCC
Q 014694 88 -----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (420)
..|+|||++|...
T Consensus 81 ~~~~~~~d~li~~ag~~~ 98 (258)
T PRK06949 81 ETEAGTIDILVNNSGVST 98 (258)
T ss_pred HHhcCCCCEEEECCCCCC
Confidence 4799999999643
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.72 E-value=8.5e-08 Score=92.77 Aligned_cols=81 Identities=19% Similarity=0.201 Sum_probs=66.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|++|++++++|++++ ++|.+++|+.++++++.+++.. ...++.++.+|++|++++.++++
T Consensus 11 ~~vlVtGa~g~iG~~la~~L~~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~ 82 (274)
T PRK07775 11 RPALVAGASSGIGAATAIELAAAG-------FPVALGARRVEKCEELVDKIRA-DGGEAVAFPLDVTDPDSVKSFVAQAE 82 (274)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 479999999999999999999987 7899999998887766655431 12356788899999999998876
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 83 ~~~~~id~vi~~Ag~~ 98 (274)
T PRK07775 83 EALGEIEVLVSGAGDT 98 (274)
T ss_pred HhcCCCCEEEECCCcC
Confidence 469999999964
|
|
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Probab=98.71 E-value=1.4e-07 Score=105.64 Aligned_cols=116 Identities=18% Similarity=0.181 Sum_probs=92.8
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCC-------CCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHH
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFP-------SSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPS 81 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~-------~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~s 81 (420)
+..+|+|+|| |++|+.++++|++..... ......|++++++.++++++.+.+ .++..+..|+.|.++
T Consensus 568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~-----~~~~~v~lDv~D~e~ 641 (1042)
T PLN02819 568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGI-----ENAEAVQLDVSDSES 641 (1042)
T ss_pred cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhc-----CCCceEEeecCCHHH
Confidence 4568999997 999999999998864200 000134899999999888777654 256789999999999
Q ss_pred HHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHHHHHHHH
Q 014694 82 LHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEA 132 (420)
Q Consensus 82 l~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~~~~~~~ 132 (420)
+.++++++|+||+|..+. +...++++|+++|+||++.+...+-++.+.+
T Consensus 642 L~~~v~~~DaVIsalP~~--~H~~VAkaAieaGkHvv~eky~~~e~~~L~e 690 (1042)
T PLN02819 642 LLKYVSQVDVVISLLPAS--CHAVVAKACIELKKHLVTASYVSEEMSALDS 690 (1042)
T ss_pred HHHhhcCCCEEEECCCch--hhHHHHHHHHHcCCCEEECcCCHHHHHHHHH
Confidence 999999999999999764 3489999999999999999977666666655
|
|
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=98.71 E-value=2.5e-08 Score=101.26 Aligned_cols=102 Identities=22% Similarity=0.245 Sum_probs=76.7
Q ss_pred CcceEEEE----cCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHH-------HHhCCCCCCCccEEEEeCC
Q 014694 9 ELFDVIIL----GASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQAL-------QWASPSHSLSIPILTADTT 77 (420)
Q Consensus 9 ~~~~IvV~----GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~-------~~l~~~~~~~~~~i~~D~~ 77 (420)
..++|+|+ |||||+|++++++|++++ ++|.+..|+.++...+. .++. ..+++++.+|+.
T Consensus 51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G-------~~V~~l~R~~~~~~~~~~~~~~~~~~l~---~~~v~~v~~D~~ 120 (378)
T PLN00016 51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAG-------HEVTLFTRGKEPSQKMKKEPFSRFSELS---SAGVKTVWGDPA 120 (378)
T ss_pred ccceEEEEeccCCCceeEhHHHHHHHHHCC-------CEEEEEecCCcchhhhccCchhhhhHhh---hcCceEEEecHH
Confidence 34579999 999999999999999987 89999999876532211 1111 124788999987
Q ss_pred CHHHHHHHH--hccCeeEeccCCCCCCcHHHHHHHHHcCC-cEEecCCc
Q 014694 78 DPPSLHRLC--SQTKLLLNCVGPYRLHGDPVAAACVHSGC-DYLDISGE 123 (420)
Q Consensus 78 d~~sl~~~~--~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~-~yvdisge 123 (420)
| +.+++ .++|+|||+++.......+++++|.++|+ ++|.+|..
T Consensus 121 d---~~~~~~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS~ 166 (378)
T PLN00016 121 D---VKSKVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSSA 166 (378)
T ss_pred H---HHhhhccCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEccH
Confidence 6 44444 47899999988654445899999999998 68877754
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.71 E-value=5.2e-08 Score=95.82 Aligned_cols=83 Identities=19% Similarity=0.129 Sum_probs=68.0
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~-~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
...|+|+||+|+||+.+++.|++++ .+|++++|+.+++++..+++.. ....++.++.+|+.|.++++++++
T Consensus 16 ~k~vlItGas~gIG~~~a~~l~~~G-------~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~ 88 (306)
T PRK06197 16 GRVAVVTGANTGLGYETAAALAAKG-------AHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADA 88 (306)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHH
Confidence 3579999999999999999999998 7899999999887766655531 012356788999999999988876
Q ss_pred ------ccCeeEeccCCC
Q 014694 88 ------QTKLLLNCVGPY 99 (420)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (420)
+.|+|||+||..
T Consensus 89 ~~~~~~~iD~li~nAg~~ 106 (306)
T PRK06197 89 LRAAYPRIDLLINNAGVM 106 (306)
T ss_pred HHhhCCCCCEEEECCccc
Confidence 479999999964
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=98.71 E-value=6.3e-08 Score=92.85 Aligned_cols=78 Identities=10% Similarity=0.098 Sum_probs=66.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|++|+.+++.|++++ .+|++++|+.++++++.+.. ..++.++.+|+.|.+++.++++
T Consensus 6 k~vlItGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~l~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~ 74 (262)
T TIGR03325 6 EVVLVTGGASGLGRAIVDRFVAEG-------ARVAVLDKSAAGLQELEAAH----GDAVVGVEGDVRSLDDHKEAVARCV 74 (262)
T ss_pred cEEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHhhc----CCceEEEEeccCCHHHHHHHHHHHH
Confidence 479999999999999999999998 79999999998887765543 2357788999999998888776
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 75 ~~~g~id~li~~Ag~~ 90 (262)
T TIGR03325 75 AAFGKIDCLIPNAGIW 90 (262)
T ss_pred HHhCCCCEEEECCCCC
Confidence 469999999964
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=98.71 E-value=6.7e-08 Score=92.07 Aligned_cols=80 Identities=15% Similarity=0.112 Sum_probs=67.6
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh----
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~---- 87 (420)
.++|+||+|++|+.++++|++++ ++|++.+|+.++++++..++.. ...++.++.+|++|++++.++++
T Consensus 4 ~~lItGas~giG~~la~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 75 (256)
T PRK08643 4 VALVTGAGQGIGFAIAKRLVEDG-------FKVAIVDYNEETAQAAADKLSK-DGGKAIAVKADVSDRDQVFAAVRQVVD 75 (256)
T ss_pred EEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 69999999999999999999987 7899999999888777766531 12456788999999999888876
Q ss_pred ---ccCeeEeccCCC
Q 014694 88 ---QTKLLLNCVGPY 99 (420)
Q Consensus 88 ---~~dvVIn~aGp~ 99 (420)
+.|+||||+|..
T Consensus 76 ~~~~id~vi~~ag~~ 90 (256)
T PRK08643 76 TFGDLNVVVNNAGVA 90 (256)
T ss_pred HcCCCCEEEECCCCC
Confidence 469999999864
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.71 E-value=5.3e-08 Score=88.78 Aligned_cols=79 Identities=24% Similarity=0.289 Sum_probs=69.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
-.|+|+||+..||..+++++.+.| -+|+|.||++++|++..++. +.+...+||+.|.+++++++.
T Consensus 6 nTiLITGG~sGIGl~lak~f~elg-------N~VIi~gR~e~~L~e~~~~~-----p~~~t~v~Dv~d~~~~~~lvewLk 73 (245)
T COG3967 6 NTILITGGASGIGLALAKRFLELG-------NTVIICGRNEERLAEAKAEN-----PEIHTEVCDVADRDSRRELVEWLK 73 (245)
T ss_pred cEEEEeCCcchhhHHHHHHHHHhC-------CEEEEecCcHHHHHHHHhcC-----cchheeeecccchhhHHHHHHHHH
Confidence 369999999999999999999998 58999999999998887754 467889999999998888876
Q ss_pred ----ccCeeEeccCCCCC
Q 014694 88 ----QTKLLLNCVGPYRL 101 (420)
Q Consensus 88 ----~~dvVIn~aGp~~~ 101 (420)
+.+++|||||....
T Consensus 74 k~~P~lNvliNNAGIqr~ 91 (245)
T COG3967 74 KEYPNLNVLINNAGIQRN 91 (245)
T ss_pred hhCCchheeeecccccch
Confidence 56999999997543
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.71 E-value=9.1e-08 Score=93.81 Aligned_cols=82 Identities=16% Similarity=0.086 Sum_probs=68.7
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
...++|+||+|++|+.++++|++++ .+|++.+|+.++++++.++++. ...+..+.+|++|.++++++++
T Consensus 9 gk~vlItGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~l~~~~~~l~~--~~~~~~~~~Dv~d~~~v~~~~~~~ 79 (296)
T PRK05872 9 GKVVVVTGAARGIGAELARRLHARG-------AKLALVDLEEAELAALAAELGG--DDRVLTVVADVTDLAAMQAAAEEA 79 (296)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhcC--CCcEEEEEecCCCHHHHHHHHHHH
Confidence 3479999999999999999999988 7999999999999888887741 2344556699999999988765
Q ss_pred -----ccCeeEeccCCCC
Q 014694 88 -----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (420)
..|+|||++|...
T Consensus 80 ~~~~g~id~vI~nAG~~~ 97 (296)
T PRK05872 80 VERFGGIDVVVANAGIAS 97 (296)
T ss_pred HHHcCCCCEEEECCCcCC
Confidence 4699999999743
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.71 E-value=7.6e-08 Score=91.17 Aligned_cols=82 Identities=18% Similarity=0.185 Sum_probs=67.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~-~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..++|+||+|++|+.++++|++++ .+|++.+|+.++++++.+++.. ....++.++.+|++|++++.++++
T Consensus 3 k~vlItGas~giG~~la~~l~~~g-------~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 75 (248)
T PRK08251 3 QKILITGASSGLGAGMAREFAAKG-------RDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEF 75 (248)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHH
Confidence 369999999999999999999987 7899999999888777665532 012357788999999999888776
Q ss_pred -----ccCeeEeccCCC
Q 014694 88 -----QTKLLLNCVGPY 99 (420)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (420)
+.|+|||++|..
T Consensus 76 ~~~~~~id~vi~~ag~~ 92 (248)
T PRK08251 76 RDELGGLDRVIVNAGIG 92 (248)
T ss_pred HHHcCCCCEEEECCCcC
Confidence 479999999853
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.71 E-value=7.6e-08 Score=96.20 Aligned_cols=81 Identities=16% Similarity=0.088 Sum_probs=69.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..|+|+||+|++|+.++++|++++ ++|++++|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 9 k~vlITGas~gIG~~la~~la~~G-------~~Vvl~~R~~~~l~~~~~~l~~-~g~~~~~v~~Dv~d~~~v~~~~~~~~ 80 (334)
T PRK07109 9 QVVVITGASAGVGRATARAFARRG-------AKVVLLARGEEGLEALAAEIRA-AGGEALAVVADVADAEAVQAAADRAE 80 (334)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHH-cCCcEEEEEecCCCHHHHHHHHHHHH
Confidence 479999999999999999999988 7899999999998887776631 23457788999999999998865
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
..|++||++|..
T Consensus 81 ~~~g~iD~lInnAg~~ 96 (334)
T PRK07109 81 EELGPIDTWVNNAMVT 96 (334)
T ss_pred HHCCCCCEEEECCCcC
Confidence 579999999964
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.70 E-value=2e-07 Score=90.11 Aligned_cols=80 Identities=15% Similarity=0.093 Sum_probs=67.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||++++|+.+++.|++++ .+|++.+|+ ++++++.+++.. ...++.++.+|++|++++.++++
T Consensus 7 k~vlItGas~gIG~aia~~l~~~G-------~~vi~~~r~-~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~ 77 (272)
T PRK08589 7 KVAVITGASTGIGQASAIALAQEG-------AYVLAVDIA-EAVSETVDKIKS-NGGKAKAYHVDISDEQQVKDFASEIK 77 (272)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC-------CEEEEEeCc-HHHHHHHHHHHh-cCCeEEEEEeecCCHHHHHHHHHHHH
Confidence 479999999999999999999998 799999999 777777766632 12357789999999999988776
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 78 ~~~g~id~li~~Ag~~ 93 (272)
T PRK08589 78 EQFGRVDVLFNNAGVD 93 (272)
T ss_pred HHcCCcCEEEECCCCC
Confidence 369999999964
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.70 E-value=8.8e-08 Score=92.58 Aligned_cols=82 Identities=20% Similarity=0.208 Sum_probs=68.5
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
...++|+||+|++|+.+++.|++++ ++|++.+|+.++++++.+++.. ...++.++.+|+.|++++.++++
T Consensus 10 ~k~vlVtGas~giG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~ 81 (278)
T PRK08277 10 GKVAVITGGGGVLGGAMAKELARAG-------AKVAILDRNQEKAEAVVAEIKA-AGGEALAVKADVLDKESLEQARQQI 81 (278)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHH
Confidence 3579999999999999999999988 7899999999888777776631 12356788999999999888765
Q ss_pred -----ccCeeEeccCCC
Q 014694 88 -----QTKLLLNCVGPY 99 (420)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (420)
++|+|||++|..
T Consensus 82 ~~~~g~id~li~~ag~~ 98 (278)
T PRK08277 82 LEDFGPCDILINGAGGN 98 (278)
T ss_pred HHHcCCCCEEEECCCCC
Confidence 579999999964
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.70 E-value=5.8e-08 Score=92.34 Aligned_cols=81 Identities=12% Similarity=0.105 Sum_probs=68.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~-- 88 (420)
..++|+||+|++|+.++++|++++ .+|++++|+.++++++.+++.. ...++.++.+|++|.+++.+++++
T Consensus 8 k~ilItGas~~iG~~ia~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~i~~~~~~~~ 79 (253)
T PRK06172 8 KVALVTGGAAGIGRATALAFAREG-------AKVVVADRDAAGGEETVALIRE-AGGEALFVACDVTRDAEVKALVEQTI 79 (253)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHHHH
Confidence 579999999999999999999987 7899999999887776665532 234578899999999999988764
Q ss_pred -----cCeeEeccCCC
Q 014694 89 -----TKLLLNCVGPY 99 (420)
Q Consensus 89 -----~dvVIn~aGp~ 99 (420)
.|+|||++|..
T Consensus 80 ~~~g~id~li~~ag~~ 95 (253)
T PRK06172 80 AAYGRLDYAFNNAGIE 95 (253)
T ss_pred HHhCCCCEEEECCCCC
Confidence 49999999964
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.70 E-value=8.2e-08 Score=92.61 Aligned_cols=82 Identities=20% Similarity=0.250 Sum_probs=68.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~-~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
.+++|+||+|+||+.++++|++++ ++|++.+|+.++++...+++... ...++.++.+|+.|++++.++++
T Consensus 8 k~vlItGasg~IG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 80 (276)
T PRK05875 8 RTYLVTGGGSGIGKGVAAGLVAAG-------AAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAA 80 (276)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-------CeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHH
Confidence 579999999999999999999987 78999999988887776665320 12356788999999999988877
Q ss_pred -----ccCeeEeccCCC
Q 014694 88 -----QTKLLLNCVGPY 99 (420)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (420)
.+|+|||++|..
T Consensus 81 ~~~~~~~d~li~~ag~~ 97 (276)
T PRK05875 81 TAWHGRLHGVVHCAGGS 97 (276)
T ss_pred HHHcCCCCEEEECCCcc
Confidence 579999999854
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.70 E-value=9.8e-08 Score=90.23 Aligned_cols=81 Identities=16% Similarity=0.137 Sum_probs=68.4
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|++|+.+++.|++++ +++++.+|+.++++.+.+++.. ...++.++.+|++|+++++++++
T Consensus 8 ~~vlItGa~g~iG~~la~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~ 79 (250)
T PRK12939 8 KRALVTGAARGLGAAFAEALAEAG-------ATVAFNDGLAAEARELAAALEA-AGGRAHAIAADLADPASVQRFFDAAA 79 (250)
T ss_pred CEEEEeCCCChHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 579999999999999999999987 7898899999988777766531 22467889999999999988875
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
++|+|||++|..
T Consensus 80 ~~~~~id~vi~~ag~~ 95 (250)
T PRK12939 80 AALGGLDGLVNNAGIT 95 (250)
T ss_pred HHcCCCCEEEECCCCC
Confidence 479999999964
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.70 E-value=8.3e-08 Score=91.45 Aligned_cols=82 Identities=17% Similarity=0.162 Sum_probs=68.6
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc-
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~- 88 (420)
...|+|+||+|+||+.++++|++++ ++|++.+|+.++++++.+++.. ...++.++.+|++|++++.+++++
T Consensus 11 ~k~ilItGas~~IG~~la~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~ 82 (256)
T PRK06124 11 GQVALVTGSARGLGFEIARALAGAG-------AHVLVNGRNAATLEAAVAALRA-AGGAAEALAFDIADEEAVAAAFARI 82 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcC-------CeEEEEeCCHHHHHHHHHHHHh-cCCceEEEEccCCCHHHHHHHHHHH
Confidence 4579999999999999999999987 7999999999888877766532 234577899999999999888763
Q ss_pred ------cCeeEeccCCC
Q 014694 89 ------TKLLLNCVGPY 99 (420)
Q Consensus 89 ------~dvVIn~aGp~ 99 (420)
.|+|||++|..
T Consensus 83 ~~~~~~id~vi~~ag~~ 99 (256)
T PRK06124 83 DAEHGRLDILVNNVGAR 99 (256)
T ss_pred HHhcCCCCEEEECCCCC
Confidence 58999999964
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.70 E-value=5.5e-08 Score=95.02 Aligned_cols=95 Identities=16% Similarity=0.218 Sum_probs=75.8
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc-C
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT-K 90 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~-d 90 (420)
+|+|+|||||+|++++++|++.+ ++|...+|...+..... ..+.++.+|++|.+.+.+.++.. |
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~--------~~~~~~~~d~~~~~~~~~~~~~~~d 66 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAAG-------HDVRGLDRLRDGLDPLL--------SGVEFVVLDLTDRDLVDELAKGVPD 66 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHhCC-------CeEEEEeCCCccccccc--------cccceeeecccchHHHHHHHhcCCC
Confidence 49999999999999999999987 89999999877653221 25678999999998888889988 9
Q ss_pred eeEeccCCCCCC-----------------cHHHHHHHHHcCCc-EEecC
Q 014694 91 LLLNCVGPYRLH-----------------GDPVAAACVHSGCD-YLDIS 121 (420)
Q Consensus 91 vVIn~aGp~~~~-----------------~~~vv~Ac~~~g~~-yvdis 121 (420)
+|||+++..... ..+++++|.++++. .|..|
T Consensus 67 ~vih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~s 115 (314)
T COG0451 67 AVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFAS 115 (314)
T ss_pred EEEEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeC
Confidence 999999976421 16778888887774 44433
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=98.69 E-value=1e-07 Score=89.83 Aligned_cols=79 Identities=19% Similarity=0.194 Sum_probs=67.1
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..+++|+||+|++|+.++++|++++ ..|.+.+|+.++++++.+.++ .++.++.+|++|.++++++++
T Consensus 6 ~~~vlItGa~g~iG~~la~~l~~~g-------~~v~~~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~ 74 (245)
T PRK12936 6 GRKALVTGASGGIGEEIARLLHAQG-------AIVGLHGTRVEKLEALAAELG----ERVKIFPANLSDRDEVKALGQKA 74 (245)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC-------CEEEEEcCCHHHHHHHHHHhC----CceEEEEccCCCHHHHHHHHHHH
Confidence 3479999999999999999999988 688888999988887766553 357788999999999988765
Q ss_pred -----ccCeeEeccCCC
Q 014694 88 -----QTKLLLNCVGPY 99 (420)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (420)
+.|+||||+|..
T Consensus 75 ~~~~~~id~vi~~ag~~ 91 (245)
T PRK12936 75 EADLEGVDILVNNAGIT 91 (245)
T ss_pred HHHcCCCCEEEECCCCC
Confidence 479999999964
|
|
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=98.69 E-value=1.2e-07 Score=92.13 Aligned_cols=105 Identities=15% Similarity=0.141 Sum_probs=79.4
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEec----ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR----NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagR----s~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~ 85 (420)
...|+|+||+||||+|++-+|.+++ +.|.+++. ..+.+..+.+-.. +...+.++.+|+.|.+.|+++
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~g-------y~v~~vDNl~n~~~~sl~r~~~l~~--~~~~v~f~~~Dl~D~~~L~kv 72 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRG-------YGVVIVDNLNNSYLESLKRVRQLLG--EGKSVFFVEGDLNDAEALEKL 72 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCC-------CcEEEEecccccchhHHHHHHHhcC--CCCceEEEEeccCCHHHHHHH
Confidence 3579999999999999999999998 78998885 3345544444332 346899999999999999999
Q ss_pred Hhc--cCeeEeccCCCCC----------C------cHHHHHHHHHcCCc-EEecCCc
Q 014694 86 CSQ--TKLLLNCVGPYRL----------H------GDPVAAACVHSGCD-YLDISGE 123 (420)
Q Consensus 86 ~~~--~dvVIn~aGp~~~----------~------~~~vv~Ac~~~g~~-yvdisge 123 (420)
++. .|-|+|.|+--.. + ..+++++|+++++. .|.+|+.
T Consensus 73 F~~~~fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssa 129 (343)
T KOG1371|consen 73 FSEVKFDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSA 129 (343)
T ss_pred HhhcCCceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecce
Confidence 984 6899999984221 1 27778888888874 4444433
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.69 E-value=9.7e-08 Score=89.40 Aligned_cols=80 Identities=24% Similarity=0.223 Sum_probs=67.3
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
...|+|+||||++|+.+++.|++++ ++|++++|+.++..+..+++. .....++.+|+.|.+++.++++
T Consensus 7 ~k~vlItGatg~iG~~la~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~ 76 (239)
T PRK12828 7 GKVVAITGGFGGLGRATAAWLAARG-------ARVALIGRGAAPLSQTLPGVP---ADALRIGGIDLVDPQAARRAVDEV 76 (239)
T ss_pred CCEEEEECCCCcHhHHHHHHHHHCC-------CeEEEEeCChHhHHHHHHHHh---hcCceEEEeecCCHHHHHHHHHHH
Confidence 3479999999999999999999987 789999999888776666553 2356788899999999988876
Q ss_pred -----ccCeeEeccCCC
Q 014694 88 -----QTKLLLNCVGPY 99 (420)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (420)
++|+|||++|..
T Consensus 77 ~~~~~~~d~vi~~ag~~ 93 (239)
T PRK12828 77 NRQFGRLDALVNIAGAF 93 (239)
T ss_pred HHHhCCcCEEEECCccc
Confidence 479999999864
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.69 E-value=9.8e-08 Score=91.01 Aligned_cols=78 Identities=17% Similarity=0.176 Sum_probs=67.7
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc---
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ--- 88 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~--- 88 (420)
.++|+||||++|+.++++|++++ .+|++.+|+.++++.+.+++. ..++.++.+|+.|.+++.+++.+
T Consensus 4 ~ilItGat~~iG~~la~~L~~~g-------~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~ 73 (257)
T PRK07074 4 TALVTGAAGGIGQALARRFLAAG-------DRVLALDIDAAALAAFADALG---DARFVPVACDLTDAASLAAALANAAA 73 (257)
T ss_pred EEEEECCcchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhc---CCceEEEEecCCCHHHHHHHHHHHHH
Confidence 69999999999999999999987 789999999998887777663 24577899999999999888764
Q ss_pred ----cCeeEeccCCC
Q 014694 89 ----TKLLLNCVGPY 99 (420)
Q Consensus 89 ----~dvVIn~aGp~ 99 (420)
.|+|||++|..
T Consensus 74 ~~~~~d~vi~~ag~~ 88 (257)
T PRK07074 74 ERGPVDVLVANAGAA 88 (257)
T ss_pred HcCCCCEEEECCCCC
Confidence 79999999864
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.69 E-value=8.1e-08 Score=91.77 Aligned_cols=81 Identities=17% Similarity=0.245 Sum_probs=67.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|++|.+++++|++++ ++|++++|+.++++...+.+.. ...++.++.+|++|+++++++++
T Consensus 13 k~ilItGa~g~IG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~i~~-~~~~~~~~~~Dl~d~~~i~~~~~~~~ 84 (259)
T PRK08213 13 KTALVTGGSRGLGLQIAEALGEAG-------ARVVLSARKAEELEEAAAHLEA-LGIDALWIAADVADEADIERLAEETL 84 (259)
T ss_pred CEEEEECCCchHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEEccCCCHHHHHHHHHHHH
Confidence 579999999999999999999987 7899999999888777766531 12356789999999999977665
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 85 ~~~~~id~vi~~ag~~ 100 (259)
T PRK08213 85 ERFGHVDILVNNAGAT 100 (259)
T ss_pred HHhCCCCEEEECCCCC
Confidence 479999999853
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.68 E-value=1.3e-07 Score=89.53 Aligned_cols=79 Identities=20% Similarity=0.227 Sum_probs=66.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|++|+.++++|++++ ++|++.+|+.++++++.++++ .++.++.+|+.|.+++.++++
T Consensus 7 k~vlItGasg~iG~~la~~l~~~g-------~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~ 75 (249)
T PRK06500 7 KTALITGGTSGIGLETARQFLAEG-------ARVAITGRDPASLEAARAELG----ESALVIRADAGDVAAQKALAQALA 75 (249)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC-------CEEEEecCCHHHHHHHHHHhC----CceEEEEecCCCHHHHHHHHHHHH
Confidence 479999999999999999999988 789999999888877777663 356788999999988777654
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
+.|+|||++|...
T Consensus 76 ~~~~~id~vi~~ag~~~ 92 (249)
T PRK06500 76 EAFGRLDAVFINAGVAK 92 (249)
T ss_pred HHhCCCCEEEECCCCCC
Confidence 5799999999643
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.68 E-value=1.1e-07 Score=91.29 Aligned_cols=83 Identities=20% Similarity=0.151 Sum_probs=69.6
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc-
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~- 88 (420)
...++|+||+|++|+.++++|++++ +++++.+|+.+++++..+++.. ...++.++.+|++|++++++++.+
T Consensus 10 ~k~~lItGa~~~iG~~ia~~l~~~G-------~~vv~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~ 81 (265)
T PRK07097 10 GKIALITGASYGIGFAIAKAYAKAG-------ATIVFNDINQELVDKGLAAYRE-LGIEAHGYVCDVTDEDGVQAMVSQI 81 (265)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-------CeEEEEeCCHHHHHHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHHH
Confidence 3479999999999999999999988 7899999999988877766631 123577899999999999998864
Q ss_pred ------cCeeEeccCCCC
Q 014694 89 ------TKLLLNCVGPYR 100 (420)
Q Consensus 89 ------~dvVIn~aGp~~ 100 (420)
.|+|||++|...
T Consensus 82 ~~~~~~id~li~~ag~~~ 99 (265)
T PRK07097 82 EKEVGVIDILVNNAGIIK 99 (265)
T ss_pred HHhCCCCCEEEECCCCCC
Confidence 799999999643
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=98.68 E-value=7.4e-08 Score=93.36 Aligned_cols=82 Identities=23% Similarity=0.311 Sum_probs=66.9
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc--
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT-- 89 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~-- 89 (420)
+|+|+|||||+|++++++|++++ ++|.+..|+ .+|+.|++++.++++++
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g-------~~v~~~~r~----------------------~~d~~~~~~~~~~~~~~~~ 51 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEG-------RVVVALTSS----------------------QLDLTDPEALERLLRAIRP 51 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcC-------CEEEEeCCc----------------------ccCCCCHHHHHHHHHhCCC
Confidence 48999999999999999999987 788888874 25888999999999876
Q ss_pred CeeEeccCCCCCC----------------cHHHHHHHHHcCCcEEecCC
Q 014694 90 KLLLNCVGPYRLH----------------GDPVAAACVHSGCDYLDISG 122 (420)
Q Consensus 90 dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~~yvdisg 122 (420)
|+||||+|+.... ..+++++|.+.+.++|.+|.
T Consensus 52 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~Ss 100 (287)
T TIGR01214 52 DAVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARHGARLVHIST 100 (287)
T ss_pred CEEEECCccccccccccCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEee
Confidence 9999999974321 25677788877777777765
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.67 E-value=1.1e-07 Score=90.89 Aligned_cols=81 Identities=28% Similarity=0.286 Sum_probs=67.9
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh----
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~---- 87 (420)
.++|+||+|++|+.+++.|++.+ ++|++.+|+.++++++.+++.. ...++.++.+|+.|++++.++++
T Consensus 3 ~vlVtGasg~iG~~la~~l~~~g-------~~Vi~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 74 (263)
T PRK06181 3 VVIITGASEGIGRALAVRLARAG-------AQLVLAARNETRLASLAQELAD-HGGEALVVPTDVSDAEACERLIEAAVA 74 (263)
T ss_pred EEEEecCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 69999999999999999999887 7899999998888777666532 22356788999999999988876
Q ss_pred ---ccCeeEeccCCCC
Q 014694 88 ---QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ---~~dvVIn~aGp~~ 100 (420)
..|+||||+|...
T Consensus 75 ~~~~id~vi~~ag~~~ 90 (263)
T PRK06181 75 RFGGIDILVNNAGITM 90 (263)
T ss_pred HcCCCCEEEECCCccc
Confidence 5799999999754
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.67 E-value=8.7e-08 Score=92.61 Aligned_cols=78 Identities=18% Similarity=0.122 Sum_probs=66.7
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh----
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~---- 87 (420)
.|+|+||+|++|++++++|++++ ++|++.+|+.++++.+.+.+. ..+.++.+|++|++++.++++
T Consensus 5 ~vlItGasg~iG~~~a~~l~~~g-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~ 73 (275)
T PRK08263 5 VWFITGASRGFGRAWTEAALERG-------DRVVATARDTATLADLAEKYG----DRLLPLALDVTDRAAVFAAVETAVE 73 (275)
T ss_pred EEEEeCCCChHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHhcc----CCeeEEEccCCCHHHHHHHHHHHHH
Confidence 69999999999999999999987 789999999998877766542 356788999999999988876
Q ss_pred ---ccCeeEeccCCCC
Q 014694 88 ---QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ---~~dvVIn~aGp~~ 100 (420)
.+|+||||+|...
T Consensus 74 ~~~~~d~vi~~ag~~~ 89 (275)
T PRK08263 74 HFGRLDIVVNNAGYGL 89 (275)
T ss_pred HcCCCCEEEECCCCcc
Confidence 4699999999653
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.67 E-value=9.5e-08 Score=90.52 Aligned_cols=81 Identities=11% Similarity=0.090 Sum_probs=65.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEE-EecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLAL-AGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~i-agRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
.+++|+||+|++|+.++++|++++ .+|++ ..|+.++++++.+++.. ...++.++.+|++|++++.++++
T Consensus 5 ~~vlItGa~g~iG~~~a~~l~~~g-------~~v~~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 76 (250)
T PRK08063 5 KVALVTGSSRGIGKAIALRLAEEG-------YDIAVNYARSRKAAEETAEEIEA-LGRKALAVKANVGDVEKIKEMFAQI 76 (250)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEcCCCHHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 479999999999999999999987 67655 58888887776666531 13457788999999999998877
Q ss_pred -----ccCeeEeccCCC
Q 014694 88 -----QTKLLLNCVGPY 99 (420)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 77 ~~~~~~id~vi~~ag~~ 93 (250)
T PRK08063 77 DEEFGRLDVFVNNAASG 93 (250)
T ss_pred HHHcCCCCEEEECCCCC
Confidence 369999999864
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.67 E-value=1e-07 Score=91.28 Aligned_cols=81 Identities=21% Similarity=0.206 Sum_probs=69.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|++|+.++++|++++ ++|++++|+.++++.+.+++. ...++.++.+|+.|++++.++++
T Consensus 6 ~~vlItG~s~~iG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~d~~~~~~~~~~~~ 76 (263)
T PRK09072 6 KRVLLTGASGGIGQALAEALAAAG-------ARLLLVGRNAEKLEALAARLP--YPGRHRWVVADLTSEAGREAVLARAR 76 (263)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHh--cCCceEEEEccCCCHHHHHHHHHHHH
Confidence 469999999999999999999988 789999999998888777663 23467889999999999888765
Q ss_pred ---ccCeeEeccCCCC
Q 014694 88 ---QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ---~~dvVIn~aGp~~ 100 (420)
..|+|||++|...
T Consensus 77 ~~~~id~lv~~ag~~~ 92 (263)
T PRK09072 77 EMGGINVLINNAGVNH 92 (263)
T ss_pred hcCCCCEEEECCCCCC
Confidence 4699999999643
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=98.67 E-value=2.4e-08 Score=97.74 Aligned_cols=87 Identities=26% Similarity=0.455 Sum_probs=66.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~-- 88 (420)
|+|+|+||+|++|+.++++|.+++ +++...+|+ ..|+.|.+++.+++++
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~-------~~v~~~~r~----------------------~~dl~d~~~~~~~~~~~~ 51 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERG-------YEVIATSRS----------------------DLDLTDPEAVAKLLEAFK 51 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTS-------EEEEEESTT----------------------CS-TTSHHHHHHHHHHH-
T ss_pred CEEEEECCCCHHHHHHHHHHhhCC-------CEEEEeCch----------------------hcCCCCHHHHHHHHHHhC
Confidence 789999999999999999998876 788887775 2578899999999875
Q ss_pred cCeeEeccCCCCCC----------------cHHHHHHHHHcCCcEEecCCcHHH
Q 014694 89 TKLLLNCVGPYRLH----------------GDPVAAACVHSGCDYLDISGEPEF 126 (420)
Q Consensus 89 ~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~~yvdisge~~~ 126 (420)
.|+||||||..... ..+++++|.+.|+++|.+|.+..|
T Consensus 52 pd~Vin~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~~~li~~STd~VF 105 (286)
T PF04321_consen 52 PDVVINCAAYTNVDACEKNPEEAYAINVDATKNLAEACKERGARLIHISTDYVF 105 (286)
T ss_dssp -SEEEE------HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT-EEEEEEEGGGS
T ss_pred CCeEeccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcCCcEEEeeccEEE
Confidence 79999999864321 268899999999999999977665
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=98.67 E-value=1e-07 Score=91.16 Aligned_cols=103 Identities=15% Similarity=0.248 Sum_probs=65.2
Q ss_pred EEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh---HHHHHHHHhCCC---------CCCCccEEEEeCCCH---
Q 014694 15 ILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT---RVKQALQWASPS---------HSLSIPILTADTTDP--- 79 (420)
Q Consensus 15 V~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~---kl~~~~~~l~~~---------~~~~~~~i~~D~~d~--- 79 (420)
|||||||+|++++++|++..+ ..+|.+..|+.+ ..+++.+.+... ...++.++.+|++++
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~-----~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lG 75 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPP-----DVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLG 75 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS------TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG
T ss_pred CcCCCcHHHHHHHHHHHcCCC-----CcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccC
Confidence 799999999999999999873 148999999763 344443433220 146899999999864
Q ss_pred ---HHHHHHHhccCeeEeccCCCCCCc-------------HHHHHHHHHcC-CcEEecCC
Q 014694 80 ---PSLHRLCSQTKLLLNCVGPYRLHG-------------DPVAAACVHSG-CDYLDISG 122 (420)
Q Consensus 80 ---~sl~~~~~~~dvVIn~aGp~~~~~-------------~~vv~Ac~~~g-~~yvdisg 122 (420)
+....+.+++|+|||||+...... .++++.|.+.+ .+++.+|.
T Consensus 76 L~~~~~~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iST 135 (249)
T PF07993_consen 76 LSDEDYQELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYIST 135 (249)
T ss_dssp --HHHHHHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS---EEEEEE
T ss_pred CChHHhhccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhccCcceEEecc
Confidence 578888899999999999766542 66777777443 25666654
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.67 E-value=9e-08 Score=91.76 Aligned_cols=82 Identities=20% Similarity=0.205 Sum_probs=67.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~-~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..++|+||+|++|+.+++.|++++ .+|++.+|+.+++++..+++... ...++..+.+|++|.+++.++++
T Consensus 9 k~~lItGas~giG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 81 (265)
T PRK07062 9 RVAVVTGGSSGIGLATVELLLEAG-------ASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAV 81 (265)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC-------CeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHH
Confidence 479999999999999999999988 78999999999888777665321 11356678999999999988765
Q ss_pred -----ccCeeEeccCCC
Q 014694 88 -----QTKLLLNCVGPY 99 (420)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 82 ~~~~g~id~li~~Ag~~ 98 (265)
T PRK07062 82 EARFGGVDMLVNNAGQG 98 (265)
T ss_pred HHhcCCCCEEEECCCCC
Confidence 369999999964
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=98.66 E-value=1.1e-07 Score=90.06 Aligned_cols=81 Identities=17% Similarity=0.124 Sum_probs=67.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|++|+.++++|++++ ++|++.+|+.++.+++.+++.. ...++.++.+|+.|.++++++++
T Consensus 4 ~~ilItGas~~iG~~la~~l~~~g-------~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~~ 75 (250)
T TIGR03206 4 KTAIVTGGGGGIGGATCRRFAEEG-------AKVAVFDLNREAAEKVAADIRA-KGGNAQAFACDITDRDSVDTAVAAAE 75 (250)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCC-------CEEEEecCCHHHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 469999999999999999999987 7899999999887776665531 12457889999999999998876
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 76 ~~~~~~d~vi~~ag~~ 91 (250)
T TIGR03206 76 QALGPVDVLVNNAGWD 91 (250)
T ss_pred HHcCCCCEEEECCCCC
Confidence 479999999864
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=98.66 E-value=1.5e-07 Score=94.28 Aligned_cols=107 Identities=18% Similarity=0.248 Sum_probs=72.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh--hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~--~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
|+|+|+|||||+|++++++|++++. ..+++.+|.. ...+.+. .+. ...++.++.+|+.|.+++.+++++
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~------~~v~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~Dl~d~~~~~~~~~~ 71 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQ------DSVVNVDKLTYAGNLESLA-DVS--DSERYVFEHADICDRAELDRIFAQ 71 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCC------CeEEEecCCCccchHHHHH-hcc--cCCceEEEEecCCCHHHHHHHHHh
Confidence 4799999999999999999999872 2344444432 2222222 221 123467789999999999999974
Q ss_pred --cCeeEeccCCCCCC----------------cHHHHHHHHHc---------CC-cEEecCCcHHH
Q 014694 89 --TKLLLNCVGPYRLH----------------GDPVAAACVHS---------GC-DYLDISGEPEF 126 (420)
Q Consensus 89 --~dvVIn~aGp~~~~----------------~~~vv~Ac~~~---------g~-~yvdisge~~~ 126 (420)
+|+|||+||..... ..+++++|.+. ++ ++|.+|....+
T Consensus 72 ~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vy 137 (352)
T PRK10084 72 HQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVY 137 (352)
T ss_pred cCCCEEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhc
Confidence 89999999964321 26777888763 23 57777654433
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.66 E-value=1.1e-07 Score=91.20 Aligned_cols=86 Identities=15% Similarity=0.179 Sum_probs=68.0
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhH-HHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR-VKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~k-l~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
....|+|+||+|++|+.++++|++++. .+|++.+|+.++ ++++.+++......++.++.+|+.|++++.++++
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg------~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~ 80 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAP------ARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVID 80 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCC------CeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHH
Confidence 345799999999999999999999852 789999999886 7777766642112367889999999998766654
Q ss_pred ------ccCeeEeccCCCC
Q 014694 88 ------QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (420)
+.|++||++|...
T Consensus 81 ~~~~~g~id~li~~ag~~~ 99 (253)
T PRK07904 81 AAFAGGDVDVAIVAFGLLG 99 (253)
T ss_pred HHHhcCCCCEEEEeeecCC
Confidence 6899999998653
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.66 E-value=1.2e-07 Score=91.39 Aligned_cols=81 Identities=15% Similarity=0.122 Sum_probs=65.4
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc---
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ--- 88 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~--- 88 (420)
.++|+||+|++|+.++++|++++ .+|++.+|+.+++++..+++.........++.+|++|++++.+++.+
T Consensus 2 ~vlItGas~giG~~la~~la~~G-------~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 74 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQG-------AELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHA 74 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHH
Confidence 68999999999999999999987 78999999998887776665321112244578999999998887764
Q ss_pred ----cCeeEeccCCC
Q 014694 89 ----TKLLLNCVGPY 99 (420)
Q Consensus 89 ----~dvVIn~aGp~ 99 (420)
.|+|||++|..
T Consensus 75 ~~~~id~lv~~ag~~ 89 (272)
T PRK07832 75 AHGSMDVVMNIAGIS 89 (272)
T ss_pred hcCCCCEEEECCCCC
Confidence 69999999964
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.66 E-value=1e-07 Score=90.78 Aligned_cols=82 Identities=11% Similarity=0.102 Sum_probs=68.6
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc-
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~- 88 (420)
...++|+||+|++|+.++++|++++ +++++.+|+.++++++.+++.. ...++.++.+|++|++++.+++..
T Consensus 9 ~k~~lItGas~giG~~ia~~L~~~G-------~~vvl~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~~~~~~~~~ 80 (254)
T PRK08085 9 GKNILITGSAQGIGFLLATGLAEYG-------AEIIINDITAERAELAVAKLRQ-EGIKAHAAPFNVTHKQEVEAAIEHI 80 (254)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcC-------CEEEEEcCCHHHHHHHHHHHHh-cCCeEEEEecCCCCHHHHHHHHHHH
Confidence 3479999999999999999999988 7999999999988887776642 123566788999999999988753
Q ss_pred ------cCeeEeccCCC
Q 014694 89 ------TKLLLNCVGPY 99 (420)
Q Consensus 89 ------~dvVIn~aGp~ 99 (420)
.|+|||++|..
T Consensus 81 ~~~~~~id~vi~~ag~~ 97 (254)
T PRK08085 81 EKDIGPIDVLINNAGIQ 97 (254)
T ss_pred HHhcCCCCEEEECCCcC
Confidence 69999999964
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.66 E-value=1.3e-07 Score=89.62 Aligned_cols=76 Identities=26% Similarity=0.253 Sum_probs=65.2
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc---
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ--- 88 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~--- 88 (420)
.++|+||||++|+.+++.|++++ ++|++.+|+.++++++.+.. .++.++.+|++|++++++++++
T Consensus 3 ~vlItGas~giG~~la~~L~~~G-------~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~ 70 (240)
T PRK06101 3 AVLITGATSGIGKQLALDYAKQG-------WQVIACGRNQSVLDELHTQS-----ANIFTLAFDVTDHPGTKAALSQLPF 70 (240)
T ss_pred EEEEEcCCcHHHHHHHHHHHhCC-------CEEEEEECCHHHHHHHHHhc-----CCCeEEEeeCCCHHHHHHHHHhccc
Confidence 58999999999999999999988 78999999998887765532 3578899999999999999886
Q ss_pred -cCeeEeccCCC
Q 014694 89 -TKLLLNCVGPY 99 (420)
Q Consensus 89 -~dvVIn~aGp~ 99 (420)
.|++||++|..
T Consensus 71 ~~d~~i~~ag~~ 82 (240)
T PRK06101 71 IPELWIFNAGDC 82 (240)
T ss_pred CCCEEEEcCccc
Confidence 47889999853
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.66 E-value=8.2e-08 Score=92.92 Aligned_cols=84 Identities=25% Similarity=0.257 Sum_probs=67.9
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCC-CccEEEEeCCCHHHHHHHHh-
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSL-SIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~-~~~~i~~D~~d~~sl~~~~~- 87 (420)
...|+|||||..||.++|.+|++.| .++++..|+..+++.+.+++...... ++.++++|++|.+++.++++
T Consensus 12 ~kvVvITGASsGIG~~lA~~la~~G-------~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~ 84 (282)
T KOG1205|consen 12 GKVVLITGASSGIGEALAYELAKRG-------AKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEW 84 (282)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHhCC-------CceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHH
Confidence 3479999999999999999999998 67777788777777775555431122 58899999999999997764
Q ss_pred ------ccCeeEeccCCCC
Q 014694 88 ------QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (420)
+.|++||+||...
T Consensus 85 ~~~~fg~vDvLVNNAG~~~ 103 (282)
T KOG1205|consen 85 AIRHFGRVDVLVNNAGISL 103 (282)
T ss_pred HHHhcCCCCEEEecCcccc
Confidence 6899999999765
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.66 E-value=1.2e-07 Score=90.74 Aligned_cols=83 Identities=14% Similarity=0.118 Sum_probs=64.7
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEec-ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagR-s~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
.+.++|+||+|++|+++++.|++++ .+++++.| +.++++.+.+++.. ...++.++.+|++|.+++.+++++
T Consensus 9 ~k~vlItGas~giG~~la~~l~~~g-------~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~ 80 (258)
T PRK09134 9 PRAALVTGAARRIGRAIALDLAAHG-------FDVAVHYNRSRDEAEALAAEIRA-LGRRAVALQADLADEAEVRALVAR 80 (258)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEeCCCHHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHH
Confidence 4579999999999999999999987 67777665 55666666555421 124577899999999999988764
Q ss_pred -------cCeeEeccCCCC
Q 014694 89 -------TKLLLNCVGPYR 100 (420)
Q Consensus 89 -------~dvVIn~aGp~~ 100 (420)
.|+||||+|...
T Consensus 81 ~~~~~~~iD~vi~~ag~~~ 99 (258)
T PRK09134 81 ASAALGPITLLVNNASLFE 99 (258)
T ss_pred HHHHcCCCCEEEECCcCCC
Confidence 699999999643
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.66 E-value=1.1e-07 Score=89.48 Aligned_cols=81 Identities=20% Similarity=0.191 Sum_probs=67.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEE-ecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA-GRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~ia-gRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..|+|+||||++|+.+++.|++++ +++++. +|+.++++.+.+.+.. ...++.++.+|++|++++.++++
T Consensus 6 ~~ilI~Gasg~iG~~la~~l~~~g-------~~v~~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 77 (247)
T PRK05565 6 KVAIVTGASGGIGRAIAELLAKEG-------AKVVIAYDINEEAAQELLEEIKE-EGGDAIAVKADVSSEEDVENLVEQI 77 (247)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEcCCCHHHHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHH
Confidence 479999999999999999999887 788888 9998888777665531 12457789999999999988876
Q ss_pred -----ccCeeEeccCCC
Q 014694 88 -----QTKLLLNCVGPY 99 (420)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (420)
.+|+|||++|..
T Consensus 78 ~~~~~~id~vi~~ag~~ 94 (247)
T PRK05565 78 VEKFGKIDILVNNAGIS 94 (247)
T ss_pred HHHhCCCCEEEECCCcC
Confidence 689999999975
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.7e-07 Score=89.45 Aligned_cols=76 Identities=17% Similarity=0.142 Sum_probs=65.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..|+|+||+|++|+.++++|++++ ++|++++|+..+++...+++. ..++.+|++|+++++++++
T Consensus 8 ~~vlItGasggIG~~~a~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~------~~~~~~D~~~~~~~~~~~~~~~ 74 (255)
T PRK06057 8 RVAVITGGGSGIGLATARRLAAEG-------ATVVVGDIDPEAGKAAADEVG------GLFVPTDVTDEDAVNALFDTAA 74 (255)
T ss_pred CEEEEECCCchHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHcC------CcEEEeeCCCHHHHHHHHHHHH
Confidence 479999999999999999999988 789999999888877766553 2578999999999998887
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
+.|+|||++|..
T Consensus 75 ~~~~~id~vi~~ag~~ 90 (255)
T PRK06057 75 ETYGSVDIAFNNAGIS 90 (255)
T ss_pred HHcCCCCEEEECCCcC
Confidence 469999999864
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=98.65 E-value=2.2e-07 Score=92.46 Aligned_cols=106 Identities=18% Similarity=0.240 Sum_probs=74.3
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh------HHHHHHHHhCCC---CC-CCccEEEEeCCC---
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT------RVKQALQWASPS---HS-LSIPILTADTTD--- 78 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~------kl~~~~~~l~~~---~~-~~~~~i~~D~~d--- 78 (420)
+|+|+|||||+|++++++|++++. ..+|.+..|+.+ ++++..+..... .. .++.++.+|+++
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~-----~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~ 75 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRST-----QAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRL 75 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCC-----CCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccC
Confidence 489999999999999999999862 157899999765 222222222110 01 467888999875
Q ss_pred ---HHHHHHHHhccCeeEeccCCCCCC-------------cHHHHHHHHHcCCc-EEecCC
Q 014694 79 ---PPSLHRLCSQTKLLLNCVGPYRLH-------------GDPVAAACVHSGCD-YLDISG 122 (420)
Q Consensus 79 ---~~sl~~~~~~~dvVIn~aGp~~~~-------------~~~vv~Ac~~~g~~-yvdisg 122 (420)
.+.+.++..++|+|||+++..... ..+++++|.+.+.+ ++.+|.
T Consensus 76 gl~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS 136 (367)
T TIGR01746 76 GLSDAEWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGRAKPLHYVST 136 (367)
T ss_pred CcCHHHHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEcc
Confidence 356778888999999999965421 15677888887764 565553
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.65 E-value=2e-07 Score=87.88 Aligned_cols=77 Identities=19% Similarity=0.183 Sum_probs=66.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~-- 88 (420)
..++|+||+|++|+.+++.|++++ ++|++.+|+.++++++.+.. +..++.+|++|.+++.++++.
T Consensus 10 ~~~lItGa~g~iG~~~a~~l~~~g-------~~V~~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~v~~~~~~~~ 76 (245)
T PRK07060 10 KSVLVTGASSGIGRACAVALAQRG-------ARVVAAARNAAALDRLAGET------GCEPLRLDVGDDAAIRAALAAAG 76 (245)
T ss_pred CEEEEeCCcchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHh------CCeEEEecCCCHHHHHHHHHHhC
Confidence 479999999999999999999987 78999999998887766544 246788999999999988874
Q ss_pred -cCeeEeccCCCC
Q 014694 89 -TKLLLNCVGPYR 100 (420)
Q Consensus 89 -~dvVIn~aGp~~ 100 (420)
.|+|||++|...
T Consensus 77 ~~d~vi~~ag~~~ 89 (245)
T PRK07060 77 AFDGLVNCAGIAS 89 (245)
T ss_pred CCCEEEECCCCCC
Confidence 799999999643
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.9e-07 Score=83.75 Aligned_cols=75 Identities=25% Similarity=0.336 Sum_probs=67.4
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
|+|-|+||||-+|+.++++..++| +.|+.+.||.+|+... ..+.+++.|+.|++++.+.+.+.|
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RG-------HeVTAivRn~~K~~~~---------~~~~i~q~Difd~~~~a~~l~g~D 64 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRG-------HEVTAIVRNASKLAAR---------QGVTILQKDIFDLTSLASDLAGHD 64 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCC-------CeeEEEEeChHhcccc---------ccceeecccccChhhhHhhhcCCc
Confidence 689999999999999999999998 8999999999998432 356789999999999999999999
Q ss_pred eeEeccCCCCC
Q 014694 91 LLLNCVGPYRL 101 (420)
Q Consensus 91 vVIn~aGp~~~ 101 (420)
+||+..|....
T Consensus 65 aVIsA~~~~~~ 75 (211)
T COG2910 65 AVISAFGAGAS 75 (211)
T ss_pred eEEEeccCCCC
Confidence 99999998743
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=98.64 E-value=6.4e-08 Score=95.04 Aligned_cols=96 Identities=15% Similarity=0.220 Sum_probs=62.2
Q ss_pred EEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCC---HHH-HHHHHh-
Q 014694 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTD---PPS-LHRLCS- 87 (420)
Q Consensus 13 IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d---~~s-l~~~~~- 87 (420)
|+|+|||||+|++++++|++++ ++++++.|+.+...... .+..+|+.| .++ ++++++
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g-------~~~v~~~~~~~~~~~~~-----------~~~~~~~~d~~~~~~~~~~~~~~ 63 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKG-------ITDILVVDNLKDGTKFV-----------NLVDLDIADYMDKEDFLAQIMAG 63 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCC-------CceEEEecCCCcchHHH-----------hhhhhhhhhhhhHHHHHHHHhcc
Confidence 8999999999999999999987 55555555433211110 111234443 333 233332
Q ss_pred ----ccCeeEeccCCCCCC--------------cHHHHHHHHHcCCcEEecCCcHHH
Q 014694 88 ----QTKLLLNCVGPYRLH--------------GDPVAAACVHSGCDYLDISGEPEF 126 (420)
Q Consensus 88 ----~~dvVIn~aGp~~~~--------------~~~vv~Ac~~~g~~yvdisge~~~ 126 (420)
++|+|||+||..... ..+++++|.++++++|.+|....+
T Consensus 64 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~~i~~SS~~vy 120 (308)
T PRK11150 64 DDFGDIEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATY 120 (308)
T ss_pred cccCCccEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHcCCcEEEEcchHHh
Confidence 689999999732211 267899999999988888766544
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.3e-07 Score=90.30 Aligned_cols=80 Identities=15% Similarity=0.064 Sum_probs=66.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|++|+.++++|++++ .++++++|+++++ ++.+++.. ...++.++.+|++|++++.++++
T Consensus 8 ~~ilItGasggiG~~la~~l~~~G-------~~v~~~~r~~~~~-~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~ 78 (258)
T PRK08628 8 KVVIVTGGASGIGAAISLRLAEEG-------AIPVIFGRSAPDD-EFAEELRA-LQPRAEFVQVDLTDDAQCRDAVEQTV 78 (258)
T ss_pred CEEEEeCCCChHHHHHHHHHHHcC-------CcEEEEcCChhhH-HHHHHHHh-cCCceEEEEccCCCHHHHHHHHHHHH
Confidence 479999999999999999999988 7899999998877 55555431 13467889999999999998886
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 79 ~~~~~id~vi~~ag~~ 94 (258)
T PRK08628 79 AKFGRIDGLVNNAGVN 94 (258)
T ss_pred HhcCCCCEEEECCccc
Confidence 479999999953
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.4e-07 Score=91.20 Aligned_cols=81 Identities=27% Similarity=0.237 Sum_probs=65.6
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHh---
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~-~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
.++|+||+|++|+.+++.|++++ ++|++++|+.++++.+.+.+... ...++.++.+|++|++++++ ++
T Consensus 5 ~~lItGasg~iG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~ 76 (280)
T PRK06914 5 IAIVTGASSGFGLLTTLELAKKG-------YLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVL 76 (280)
T ss_pred EEEEECCCchHHHHHHHHHHhCC-------CEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHH
Confidence 58999999999999999999987 79999999998887766554310 12467889999999998876 43
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
..|+||||+|...
T Consensus 77 ~~~~~id~vv~~ag~~~ 93 (280)
T PRK06914 77 KEIGRIDLLVNNAGYAN 93 (280)
T ss_pred HhcCCeeEEEECCcccc
Confidence 4699999999644
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.3e-07 Score=90.06 Aligned_cols=81 Identities=17% Similarity=0.227 Sum_probs=67.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|++|+.+++.|++++ .+|++.+|+.++++++.+++.. ...++.++.+|++|++++++++.
T Consensus 2 k~~lItG~s~giG~~ia~~l~~~G-------~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~ 73 (252)
T PRK07677 2 KVVIITGGSSGMGKAMAKRFAEEG-------ANVVITGRTKEKLEEAKLEIEQ-FPGQVLTVQMDVRNPEDVQKMVEQID 73 (252)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHHH
Confidence 368999999999999999999988 7899999999888777666531 12457789999999999988775
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 74 ~~~~~id~lI~~ag~~ 89 (252)
T PRK07677 74 EKFGRIDALINNAAGN 89 (252)
T ss_pred HHhCCccEEEECCCCC
Confidence 469999999854
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.7e-07 Score=89.50 Aligned_cols=82 Identities=16% Similarity=0.181 Sum_probs=65.6
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
...++|+||+|+||+.++++|++++ ++|++++|+ ++++++.+.+.. ...++.++.+|++|.+++.++++
T Consensus 15 ~k~vlItGas~gIG~~ia~~l~~~G-------~~v~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~i~~~~~~~ 85 (258)
T PRK06935 15 GKVAIVTGGNTGLGQGYAVALAKAG-------ADIIITTHG-TNWDETRRLIEK-EGRKVTFVQVDLTKPESAEKVVKEA 85 (258)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEeCC-cHHHHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHHH
Confidence 3579999999999999999999988 789999998 555444443321 12457889999999999998887
Q ss_pred -----ccCeeEeccCCCC
Q 014694 88 -----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (420)
..|++||++|...
T Consensus 86 ~~~~g~id~li~~ag~~~ 103 (258)
T PRK06935 86 LEEFGKIDILVNNAGTIR 103 (258)
T ss_pred HHHcCCCCEEEECCCCCC
Confidence 5699999999643
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.3e-07 Score=90.22 Aligned_cols=81 Identities=17% Similarity=0.135 Sum_probs=66.6
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCC-CCCccEEEEeCCCHHHHHHHHh---
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSH-SLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~-~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
.|+|+||+|++|+.++++|++++ ++|++++|+.++++.+.+++.... ..++.++.+|++|.+++.+++.
T Consensus 4 ~ilItG~~~~IG~~la~~l~~~g-------~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~ 76 (259)
T PRK12384 4 VAVVIGGGQTLGAFLCHGLAEEG-------YRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVD 76 (259)
T ss_pred EEEEECCCcHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHH
Confidence 69999999999999999999987 799999999888877766553101 1357789999999999888776
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 77 ~~~~~id~vv~~ag~~ 92 (259)
T PRK12384 77 EIFGRVDLLVYNAGIA 92 (259)
T ss_pred HHcCCCCEEEECCCcC
Confidence 469999999854
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.5e-07 Score=89.31 Aligned_cols=81 Identities=16% Similarity=0.149 Sum_probs=66.3
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh----
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~---- 87 (420)
.++|+||+|++|+.++++|++++ ++|++++|+.++.+++.+++.. ...++.++.+|+.|++++.++++
T Consensus 3 ~vlItGa~g~lG~~l~~~l~~~g-------~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~ 74 (255)
T TIGR01963 3 TALVTGAASGIGLAIALALAAAG-------ANVVVNDLGEAGAEAAAKVATD-AGGSVIYLVADVTKEDEIADMIAAAAA 74 (255)
T ss_pred EEEEcCCcchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCceEEEECCCCCHHHHHHHHHHHHH
Confidence 69999999999999999999988 7899999998888777665531 12457789999999997766654
Q ss_pred ---ccCeeEeccCCCC
Q 014694 88 ---QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ---~~dvVIn~aGp~~ 100 (420)
+.|+|||++|...
T Consensus 75 ~~~~~d~vi~~a~~~~ 90 (255)
T TIGR01963 75 EFGGLDILVNNAGIQH 90 (255)
T ss_pred hcCCCCEEEECCCCCC
Confidence 4699999998643
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.8e-07 Score=82.93 Aligned_cols=82 Identities=23% Similarity=0.355 Sum_probs=69.1
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC--hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN--PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs--~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
.++|+||++.+|+.++++|++++. ..|++.+|+ .++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 2 ~~lItGa~~giG~~~a~~l~~~g~------~~v~~~~r~~~~~~~~~l~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 74 (167)
T PF00106_consen 2 TVLITGASSGIGRALARALARRGA------RVVILTSRSEDSEGAQELIQELKA-PGAKITFIECDLSDPESIRALIEEV 74 (167)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTT------EEEEEEESSCHHHHHHHHHHHHHH-TTSEEEEEESETTSHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHhcCc------eEEEEeeecccccccccccccccc-ccccccccccccccccccccccccc
Confidence 589999999999999999999962 789999999 7777777776642 23577889999999999999876
Q ss_pred -----ccCeeEeccCCCC
Q 014694 88 -----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (420)
..|+||||+|...
T Consensus 75 ~~~~~~ld~li~~ag~~~ 92 (167)
T PF00106_consen 75 IKRFGPLDILINNAGIFS 92 (167)
T ss_dssp HHHHSSESEEEEECSCTT
T ss_pred cccccccccccccccccc
Confidence 4699999999765
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=98.61 E-value=3e-07 Score=90.48 Aligned_cols=82 Identities=13% Similarity=0.176 Sum_probs=58.7
Q ss_pred CCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh
Q 014694 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 8 ~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
...|+|+|+||+||+|++++++|++++ ++|.+..+ |+.|.+.+...++
T Consensus 7 ~~~~kiLVtG~tGfiG~~l~~~L~~~g-------~~V~~~~~-------------------------~~~~~~~v~~~l~ 54 (298)
T PLN02778 7 SATLKFLIYGKTGWIGGLLGKLCQEQG-------IDFHYGSG-------------------------RLENRASLEADID 54 (298)
T ss_pred CCCCeEEEECCCCHHHHHHHHHHHhCC-------CEEEEecC-------------------------ccCCHHHHHHHHH
Confidence 345799999999999999999999987 67754322 2233444444444
Q ss_pred --ccCeeEeccCCCCC----C---------------cHHHHHHHHHcCCcEEecC
Q 014694 88 --QTKLLLNCVGPYRL----H---------------GDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 88 --~~dvVIn~aGp~~~----~---------------~~~vv~Ac~~~g~~yvdis 121 (420)
++|+||||||.... . ..+++++|.+.|++.+.++
T Consensus 55 ~~~~D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~~v~~s 109 (298)
T PLN02778 55 AVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERGLVLTNYA 109 (298)
T ss_pred hcCCCEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe
Confidence 68999999997531 0 1678888888888766654
|
|
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.8e-07 Score=93.40 Aligned_cols=107 Identities=19% Similarity=0.268 Sum_probs=77.2
Q ss_pred CCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh
Q 014694 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 8 ~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
++...++|+||+||+|++++++|++++. ..++++++..........+..+. ...+++.+.+|+.|...+.+.+.
T Consensus 2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~-----~~~irv~D~~~~~~~~~~e~~~~-~~~~v~~~~~D~~~~~~i~~a~~ 75 (361)
T KOG1430|consen 2 EKKLSVLVTGGSGFLGQHLVQALLENEL-----KLEIRVVDKTPTQSNLPAELTGF-RSGRVTVILGDLLDANSISNAFQ 75 (361)
T ss_pred CcCCEEEEECCccHHHHHHHHHHHhccc-----ccEEEEeccCccccccchhhhcc-cCCceeEEecchhhhhhhhhhcc
Confidence 3556899999999999999999999973 27899999876421111111110 14578899999999999999999
Q ss_pred ccCeeEeccCCCCCC--------------c-HHHHHHHHHcCCc-EEec
Q 014694 88 QTKLLLNCVGPYRLH--------------G-DPVAAACVHSGCD-YLDI 120 (420)
Q Consensus 88 ~~dvVIn~aGp~~~~--------------~-~~vv~Ac~~~g~~-yvdi 120 (420)
++-||+|+|++.... | .+++++|++.|+. .|.+
T Consensus 76 ~~~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYt 124 (361)
T KOG1430|consen 76 GAVVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYT 124 (361)
T ss_pred CceEEEeccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEe
Confidence 994444444443221 3 8899999999996 4443
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.9e-07 Score=88.95 Aligned_cols=82 Identities=17% Similarity=0.210 Sum_probs=67.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
|.++|+||++.+|+.++++|++ + .+|++++|+.++++++.+++.......+.++.+|+.|++++++++.
T Consensus 1 ~~vlItGas~GIG~aia~~l~~-g-------~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 72 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLCH-G-------EDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQ 72 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHhC-C-------CEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHH
Confidence 4689999999999999999984 6 7899999999999888877742111236788999999999988765
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
..|++||++|.+.
T Consensus 73 ~~~g~id~lv~nag~~~ 89 (246)
T PRK05599 73 ELAGEISLAVVAFGILG 89 (246)
T ss_pred HhcCCCCEEEEecCcCC
Confidence 4699999999753
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.60 E-value=1.6e-07 Score=90.39 Aligned_cols=81 Identities=15% Similarity=0.139 Sum_probs=66.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~-- 88 (420)
..++|+||+|+||+.++++|++++ ++|++++|+.++++...+++.. ...++.++.+|++|++++.+++++
T Consensus 10 k~ilItGasggIG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~i~~~~~~~~ 81 (264)
T PRK07576 10 KNVVVVGGTSGINLGIAQAFARAG-------ANVAVASRSQEKVDAAVAQLQQ-AGPEGLGVSADVRDYAAVEAAFAQIA 81 (264)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHH-hCCceEEEECCCCCHHHHHHHHHHHH
Confidence 479999999999999999999987 7899999998887766655531 123456789999999999988764
Q ss_pred -----cCeeEeccCCC
Q 014694 89 -----TKLLLNCVGPY 99 (420)
Q Consensus 89 -----~dvVIn~aGp~ 99 (420)
.|+|||++|..
T Consensus 82 ~~~~~iD~vi~~ag~~ 97 (264)
T PRK07576 82 DEFGPIDVLVSGAAGN 97 (264)
T ss_pred HHcCCCCEEEECCCCC
Confidence 59999999853
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=98.60 E-value=1.6e-07 Score=89.27 Aligned_cols=80 Identities=15% Similarity=0.094 Sum_probs=66.6
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh----
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~---- 87 (420)
.++|+||+|++|+.++++|++++ .++++.+|+.++++++.+++.. ...++.++.+|++|++++.++++
T Consensus 2 ~~lItG~sg~iG~~la~~l~~~G-------~~v~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~i~~~~~~~~~ 73 (254)
T TIGR02415 2 VALVTGGAQGIGKGIAERLAKDG-------FAVAVADLNEETAKETAKEINQ-AGGKAVAYKLDVSDKDQVFSAIDQAAE 73 (254)
T ss_pred EEEEeCCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 58999999999999999999987 7899999998887777666531 23457789999999999988765
Q ss_pred ---ccCeeEeccCCC
Q 014694 88 ---QTKLLLNCVGPY 99 (420)
Q Consensus 88 ---~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 74 ~~~~id~vi~~ag~~ 88 (254)
T TIGR02415 74 KFGGFDVMVNNAGVA 88 (254)
T ss_pred HcCCCCEEEECCCcC
Confidence 369999999964
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.60 E-value=2.5e-07 Score=88.30 Aligned_cols=82 Identities=18% Similarity=0.074 Sum_probs=67.8
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc-
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~- 88 (420)
...|+|+||+|++|+.++++|++++ .++++++|+.++++++.+++.. ...++.++.+|++|.+++.+++++
T Consensus 11 ~k~vlVtG~s~gIG~~la~~l~~~G-------~~vv~~~r~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~i~~~~~~~ 82 (255)
T PRK06113 11 GKCAIITGAGAGIGKEIAITFATAG-------ASVVVSDINADAANHVVDEIQQ-LGGQAFACRCDITSEQELSALADFA 82 (255)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CeEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHH
Confidence 3579999999999999999999988 7899999998888777665531 123567889999999999887663
Q ss_pred ------cCeeEeccCCC
Q 014694 89 ------TKLLLNCVGPY 99 (420)
Q Consensus 89 ------~dvVIn~aGp~ 99 (420)
.|+|||++|..
T Consensus 83 ~~~~~~~d~li~~ag~~ 99 (255)
T PRK06113 83 LSKLGKVDILVNNAGGG 99 (255)
T ss_pred HHHcCCCCEEEECCCCC
Confidence 69999999964
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.8e-07 Score=87.99 Aligned_cols=80 Identities=15% Similarity=0.169 Sum_probs=61.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh-hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~-~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
.+|+|+||||++|+.++++|++++ +++++..|+. +.++.+.+.+.. ...++.++.+|+.|++++.++++
T Consensus 7 ~~vlItGasg~iG~~l~~~l~~~g-------~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~ 78 (249)
T PRK12825 7 RVALVTGAARGLGRAIALRLARAG-------ADVVVHYRSDEEAAEELVEAVEA-LGRRAQAVQADVTDKAALEAAVAAA 78 (249)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC-------CeEEEEeCCCHHHHHHHHHHHHh-cCCceEEEECCcCCHHHHHHHHHHH
Confidence 479999999999999999999987 6777656654 344444443321 13467889999999999998875
Q ss_pred -----ccCeeEeccCC
Q 014694 88 -----QTKLLLNCVGP 98 (420)
Q Consensus 88 -----~~dvVIn~aGp 98 (420)
+.|+|||++|.
T Consensus 79 ~~~~~~id~vi~~ag~ 94 (249)
T PRK12825 79 VERFGRIDILVNNAGI 94 (249)
T ss_pred HHHcCCCCEEEECCcc
Confidence 46999999994
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.59 E-value=2.2e-07 Score=89.74 Aligned_cols=74 Identities=20% Similarity=0.189 Sum_probs=63.0
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh----
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~---- 87 (420)
.++|+||+|++|+.+++.|++++ ++|++.+|+.++++.+.+ .++.++.+|+.|+++++++++
T Consensus 3 ~vlItGasggiG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~-------~~~~~~~~Dl~~~~~~~~~~~~~~~ 68 (274)
T PRK05693 3 VVLITGCSSGIGRALADAFKAAG-------YEVWATARKAEDVEALAA-------AGFTAVQLDVNDGAALARLAEELEA 68 (274)
T ss_pred EEEEecCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHH-------CCCeEEEeeCCCHHHHHHHHHHHHH
Confidence 69999999999999999999987 799999999888765532 235788999999999988775
Q ss_pred ---ccCeeEeccCCC
Q 014694 88 ---QTKLLLNCVGPY 99 (420)
Q Consensus 88 ---~~dvVIn~aGp~ 99 (420)
+.|+|||++|..
T Consensus 69 ~~~~id~vi~~ag~~ 83 (274)
T PRK05693 69 EHGGLDVLINNAGYG 83 (274)
T ss_pred hcCCCCEEEECCCCC
Confidence 469999999964
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.59 E-value=2.1e-07 Score=88.42 Aligned_cols=80 Identities=11% Similarity=0.090 Sum_probs=67.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|+||..++++|++++ .+|++++|+.++++.+.+++.. ...++.++.+|+.|.++++++++
T Consensus 9 k~vlItGas~gIG~~l~~~l~~~G-------~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~ 80 (252)
T PRK07035 9 KIALVTGASRGIGEAIAKLLAQQG-------AHVIVSSRKLDGCQAVADAIVA-AGGKAEALACHIGEMEQIDALFAHIR 80 (252)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 479999999999999999999988 7899999999888877776631 12346788999999999888766
Q ss_pred ----ccCeeEeccCC
Q 014694 88 ----QTKLLLNCVGP 98 (420)
Q Consensus 88 ----~~dvVIn~aGp 98 (420)
..|+|||++|.
T Consensus 81 ~~~~~id~li~~ag~ 95 (252)
T PRK07035 81 ERHGRLDILVNNAAA 95 (252)
T ss_pred HHcCCCCEEEECCCc
Confidence 47999999985
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.59 E-value=2.5e-07 Score=87.05 Aligned_cols=74 Identities=26% Similarity=0.283 Sum_probs=63.9
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcc-eEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIK-SLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~-~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
...|+|+||||++|+.++++|++++ . +|++.+|+.+++++ . ..++.++.+|+.|.+++.+++++
T Consensus 6 ~~~vlItGgsg~iG~~la~~l~~~G-------~~~V~~~~r~~~~~~~----~----~~~~~~~~~D~~~~~~~~~~~~~ 70 (238)
T PRK08264 6 GKVVLVTGANRGIGRAFVEQLLARG-------AAKVYAAARDPESVTD----L----GPRVVPLQLDVTDPASVAAAAEA 70 (238)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------cccEEEEecChhhhhh----c----CCceEEEEecCCCHHHHHHHHHh
Confidence 3579999999999999999999987 5 89999999887643 2 24678899999999999998874
Q ss_pred ---cCeeEeccCC
Q 014694 89 ---TKLLLNCVGP 98 (420)
Q Consensus 89 ---~dvVIn~aGp 98 (420)
.|+|||++|.
T Consensus 71 ~~~id~vi~~ag~ 83 (238)
T PRK08264 71 ASDVTILVNNAGI 83 (238)
T ss_pred cCCCCEEEECCCc
Confidence 7999999997
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.59 E-value=2.2e-07 Score=86.95 Aligned_cols=76 Identities=25% Similarity=0.220 Sum_probs=64.0
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh----
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~---- 87 (420)
.++|+||+|++|+.++++|++++ ++|++.+|+.++.+.+. ++ .++.++.+|++|+++++++++
T Consensus 3 ~vlItG~sg~iG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~-~~-----~~~~~~~~D~~d~~~~~~~~~~~~~ 69 (225)
T PRK08177 3 TALIIGASRGLGLGLVDRLLERG-------WQVTATVRGPQQDTALQ-AL-----PGVHIEKLDMNDPASLDQLLQRLQG 69 (225)
T ss_pred EEEEeCCCchHHHHHHHHHHhCC-------CEEEEEeCCCcchHHHH-hc-----cccceEEcCCCCHHHHHHHHHHhhc
Confidence 59999999999999999999987 79999999988765442 22 356788999999999988877
Q ss_pred -ccCeeEeccCCCC
Q 014694 88 -QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -~~dvVIn~aGp~~ 100 (420)
+.|+|||++|...
T Consensus 70 ~~id~vi~~ag~~~ 83 (225)
T PRK08177 70 QRFDLLFVNAGISG 83 (225)
T ss_pred CCCCEEEEcCcccC
Confidence 4799999999753
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=98.59 E-value=3e-07 Score=86.42 Aligned_cols=82 Identities=15% Similarity=0.127 Sum_probs=64.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh-HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT-RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~-kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..++|+||||++|+.++++|++++ ++|++..|+.. +++...+++.. ...++.++.+|++|++++.++++
T Consensus 6 ~~vlItG~sg~iG~~l~~~l~~~G-------~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~ 77 (248)
T PRK05557 6 KVALVTGASRGIGRAIAERLAAQG-------ANVVINYASSEAGAEALVAEIGA-LGGKALAVQGDVSDAESVERAVDEA 77 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC-------CEEEEEeCCchhHHHHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHHH
Confidence 479999999999999999999987 78877777654 34455454421 23457788899999999988776
Q ss_pred -----ccCeeEeccCCCC
Q 014694 88 -----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (420)
+.|+|||++|...
T Consensus 78 ~~~~~~id~vi~~ag~~~ 95 (248)
T PRK05557 78 KAEFGGVDILVNNAGITR 95 (248)
T ss_pred HHHcCCCCEEEECCCcCC
Confidence 5799999999643
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.59 E-value=2.1e-07 Score=88.10 Aligned_cols=82 Identities=20% Similarity=0.164 Sum_probs=64.7
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC-hhHHHHHHHHhCCCC-CCCccEEEEeCCCHHHHHHHHh--
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-PTRVKQALQWASPSH-SLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs-~~kl~~~~~~l~~~~-~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
+++|+||+|++|+++++.|++++ ++|++.+|+ .++++++.+++.... ...+.++.+|+.|++++.++++
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 73 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQG-------AKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQA 73 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHH
Confidence 38999999999999999999987 799999998 777777766553100 1123457899999999988775
Q ss_pred -----ccCeeEeccCCCC
Q 014694 88 -----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (420)
..|+|||++|...
T Consensus 74 ~~~~~~id~vi~~ag~~~ 91 (251)
T PRK07069 74 ADAMGGLSVLVNNAGVGS 91 (251)
T ss_pred HHHcCCccEEEECCCcCC
Confidence 4699999999754
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.58 E-value=2.5e-07 Score=88.39 Aligned_cols=79 Identities=22% Similarity=0.144 Sum_probs=62.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|++|++++++|++++ ++|++.+|+.. ++++.+++.. ...++.++.+|++|.+++.++++
T Consensus 9 k~vlVtGas~gIG~~la~~l~~~G-------~~v~~~~r~~~-~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~ 79 (260)
T PRK12823 9 KVVVVTGAAQGIGRGVALRAAAEG-------ARVVLVDRSEL-VHEVAAELRA-AGGEALALTADLETYAGAQAAMAAAV 79 (260)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEeCchH-HHHHHHHHHh-cCCeEEEEEEeCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 78999999853 3344444421 12356788999999998888776
Q ss_pred ----ccCeeEeccCC
Q 014694 88 ----QTKLLLNCVGP 98 (420)
Q Consensus 88 ----~~dvVIn~aGp 98 (420)
+.|+|||+||.
T Consensus 80 ~~~~~id~lv~nAg~ 94 (260)
T PRK12823 80 EAFGRIDVLINNVGG 94 (260)
T ss_pred HHcCCCeEEEECCcc
Confidence 46999999984
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.58 E-value=2.2e-07 Score=89.07 Aligned_cols=82 Identities=12% Similarity=0.108 Sum_probs=65.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEec-ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagR-s~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..++|+||+++||+.+++.|++.+ .+|++.+| +.++++.+.+++......++.++.+|++|+++++++++
T Consensus 9 k~vlItGas~gIG~~ia~~l~~~G-------~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 81 (260)
T PRK08416 9 KTLVISGGTRGIGKAIVYEFAQSG-------VNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKI 81 (260)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence 479999999999999999999988 78887764 66777666655531112457789999999999988876
Q ss_pred -----ccCeeEeccCCC
Q 014694 88 -----QTKLLLNCVGPY 99 (420)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (420)
+.|+|||++|..
T Consensus 82 ~~~~g~id~lv~nAg~~ 98 (260)
T PRK08416 82 DEDFDRVDFFISNAIIS 98 (260)
T ss_pred HHhcCCccEEEECcccc
Confidence 369999999854
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.58 E-value=2.1e-07 Score=98.84 Aligned_cols=84 Identities=10% Similarity=0.067 Sum_probs=70.7
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
+...++|+||+|++|+.++++|++++ .+|++++|+.++++++.+++.. ...++.++.+|++|++++.++++.
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~~~~~~~~ 385 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREG-------AEVVASDIDEAAAERTAELIRA-AGAVAHAYRVDVSDADAMEAFAEW 385 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHH
Confidence 44579999999999999999999988 7899999999998887766632 123578899999999999998864
Q ss_pred -------cCeeEeccCCCC
Q 014694 89 -------TKLLLNCVGPYR 100 (420)
Q Consensus 89 -------~dvVIn~aGp~~ 100 (420)
.|+||||||...
T Consensus 386 ~~~~~g~id~lv~~Ag~~~ 404 (582)
T PRK05855 386 VRAEHGVPDIVVNNAGIGM 404 (582)
T ss_pred HHHhcCCCcEEEECCccCC
Confidence 699999999753
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=98.58 E-value=2.9e-07 Score=90.24 Aligned_cols=98 Identities=12% Similarity=0.140 Sum_probs=70.8
Q ss_pred EEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh----c
Q 014694 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS----Q 88 (420)
Q Consensus 13 IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~----~ 88 (420)
|+|+|||||+|+++++.|.+++. ..|.+.+|..... .+ .++. ...+..|+++.+.++.+.+ +
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~------~~v~~~~~~~~~~-~~-~~~~------~~~~~~d~~~~~~~~~~~~~~~~~ 66 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGI------TDILVVDNLRDGH-KF-LNLA------DLVIADYIDKEDFLDRLEKGAFGK 66 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCC------ceEEEEecCCCch-hh-hhhh------heeeeccCcchhHHHHHHhhccCC
Confidence 68999999999999999999871 2677777654321 11 1111 1245678888888877764 7
Q ss_pred cCeeEeccCCCCCC--------------cHHHHHHHHHcCCcEEecCCcH
Q 014694 89 TKLLLNCVGPYRLH--------------GDPVAAACVHSGCDYLDISGEP 124 (420)
Q Consensus 89 ~dvVIn~aGp~~~~--------------~~~vv~Ac~~~g~~yvdisge~ 124 (420)
+|+|||+|++.... ..+++++|.+.++++|.+|...
T Consensus 67 ~D~vvh~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~v~~SS~~ 116 (314)
T TIGR02197 67 IEAIFHQGACSDTTETDGEYMMENNYQYSKRLLDWCAEKGIPFIYASSAA 116 (314)
T ss_pred CCEEEECccccCccccchHHHHHHHHHHHHHHHHHHHHhCCcEEEEccHH
Confidence 99999999964321 1668899999888888888644
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.57 E-value=3.1e-07 Score=88.87 Aligned_cols=81 Identities=15% Similarity=0.107 Sum_probs=64.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhH-------HHHHHHHhCCCCCCCccEEEEeCCCHHHHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR-------VKQALQWASPSHSLSIPILTADTTDPPSLH 83 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~k-------l~~~~~~l~~~~~~~~~~i~~D~~d~~sl~ 83 (420)
..++|+||+|++|+.+++.|++++ .+|++.+|+.++ +++..+++.. ...++.++.+|++|++++.
T Consensus 7 k~vlItGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~D~~~~~~i~ 78 (273)
T PRK08278 7 KTLFITGASRGIGLAIALRAARDG-------ANIVIAAKTAEPHPKLPGTIHTAAEEIEA-AGGQALPLVGDVRDEDQVA 78 (273)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC-------CEEEEEecccccccchhhHHHHHHHHHHh-cCCceEEEEecCCCHHHHH
Confidence 479999999999999999999988 789999997643 4444444421 1235678899999999998
Q ss_pred HHHh-------ccCeeEeccCCC
Q 014694 84 RLCS-------QTKLLLNCVGPY 99 (420)
Q Consensus 84 ~~~~-------~~dvVIn~aGp~ 99 (420)
++++ +.|+|||++|..
T Consensus 79 ~~~~~~~~~~g~id~li~~ag~~ 101 (273)
T PRK08278 79 AAVAKAVERFGGIDICVNNASAI 101 (273)
T ss_pred HHHHHHHHHhCCCCEEEECCCCc
Confidence 8876 579999999964
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.57 E-value=3.1e-07 Score=87.29 Aligned_cols=81 Identities=16% Similarity=0.119 Sum_probs=64.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh-hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~-~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..++|+||+|++|+.+++.|++++ .+|++.+|+. +++++..+.+.. ...++.++.+|++|++++.++++
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g-------~~vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 74 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAG-------FDLAINDRPDDEELAATQQELRA-LGVEVIFFPADVADLSAHEAMLDAA 74 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEecCchhHHHHHHHHHHh-cCCceEEEEecCCCHHHHHHHHHHH
Confidence 369999999999999999999987 7899989864 455555554431 12457889999999999888776
Q ss_pred -----ccCeeEeccCCC
Q 014694 88 -----QTKLLLNCVGPY 99 (420)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (420)
..|+||||+|..
T Consensus 75 ~~~~~~id~vi~~ag~~ 91 (256)
T PRK12745 75 QAAWGRIDCLVNNAGVG 91 (256)
T ss_pred HHhcCCCCEEEECCccC
Confidence 469999999863
|
|
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.4e-07 Score=91.17 Aligned_cols=86 Identities=21% Similarity=0.302 Sum_probs=70.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~-- 88 (420)
|+|+|+|++|.+|+.+++.|. .. .+|...+|.. +|++|++.+.+++++
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~~-------~~v~a~~~~~----------------------~Ditd~~~v~~~i~~~~ 50 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-GE-------FEVIATDRAE----------------------LDITDPDAVLEVIRETR 50 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-CC-------ceEEeccCcc----------------------ccccChHHHHHHHHhhC
Confidence 469999999999999999987 22 6777766642 589999999999985
Q ss_pred cCeeEeccCCCCCC----------------cHHHHHHHHHcCCcEEecCCcHHH
Q 014694 89 TKLLLNCVGPYRLH----------------GDPVAAACVHSGCDYLDISGEPEF 126 (420)
Q Consensus 89 ~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~~yvdisge~~~ 126 (420)
.|+|||||+..... ..+++++|.+.|+.+|++|.+..|
T Consensus 51 PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVhiSTDyVF 104 (281)
T COG1091 51 PDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGARLVHISTDYVF 104 (281)
T ss_pred CCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhCCeEEEeecceEe
Confidence 59999999865543 288999999999999999865554
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.56 E-value=3.3e-07 Score=87.62 Aligned_cols=82 Identities=20% Similarity=0.238 Sum_probs=68.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|.+|+.+++.|++++ .+|++++|+.++++++.+++......++.++.+|++|++++.++++
T Consensus 8 k~vlItG~~~giG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g 80 (259)
T PRK06125 8 KRVLITGASKGIGAAAAEAFAAEG-------CHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAG 80 (259)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhC
Confidence 579999999999999999999987 7999999999988877766642112356788999999999988776
Q ss_pred ccCeeEeccCCC
Q 014694 88 QTKLLLNCVGPY 99 (420)
Q Consensus 88 ~~dvVIn~aGp~ 99 (420)
+.|++|||+|..
T Consensus 81 ~id~lv~~ag~~ 92 (259)
T PRK06125 81 DIDILVNNAGAI 92 (259)
T ss_pred CCCEEEECCCCC
Confidence 479999999964
|
|
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=98.56 E-value=4.8e-07 Score=95.10 Aligned_cols=110 Identities=17% Similarity=0.189 Sum_probs=74.8
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh---HHHHHHHHh-------------CC----CCCCC
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT---RVKQALQWA-------------SP----SHSLS 68 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~---kl~~~~~~l-------------~~----~~~~~ 68 (420)
+...|+|||||||+|+++++.|++.++. ..+|.+..|... ..+.+..++ .. ....+
T Consensus 10 ~~k~VlvTGaTGFlG~~ll~~LL~~~~~----v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~k 85 (491)
T PLN02996 10 ENKTILVTGATGFLAKIFVEKILRVQPN----VKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEK 85 (491)
T ss_pred CCCeEEEeCCCcHHHHHHHHHHHhhCCC----CCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcC
Confidence 4457999999999999999999987532 147888888642 121211111 00 00146
Q ss_pred ccEEEEeCC-------CHHHHHHHHhccCeeEeccCCCCCC-------------cHHHHHHHHHc-CC-cEEecCC
Q 014694 69 IPILTADTT-------DPPSLHRLCSQTKLLLNCVGPYRLH-------------GDPVAAACVHS-GC-DYLDISG 122 (420)
Q Consensus 69 ~~~i~~D~~-------d~~sl~~~~~~~dvVIn~aGp~~~~-------------~~~vv~Ac~~~-g~-~yvdisg 122 (420)
+.++.+|++ |.+.++++++++|+|||+|+..... ..+++++|.+. ++ ++|.+|.
T Consensus 86 v~~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST 161 (491)
T PLN02996 86 VTPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVST 161 (491)
T ss_pred EEEEecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEee
Confidence 789999998 5556788889999999999975432 16778888775 44 4566553
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.55 E-value=3.6e-07 Score=86.60 Aligned_cols=77 Identities=14% Similarity=0.084 Sum_probs=63.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEe-cChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc-
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAG-RNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iag-Rs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~- 88 (420)
..|+|+||+|++|+.+++.|++.+ ++|++.. |+.++++.+.+++. .++.++.+|+.|++++.+++++
T Consensus 6 k~ilItGas~gIG~~la~~l~~~G-------~~vv~~~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~ 74 (253)
T PRK08642 6 QTVLVTGGSRGLGAAIARAFAREG-------ARVVVNYHQSEDAAEALADELG----DRAIALQADVTDREQVQAMFATA 74 (253)
T ss_pred CEEEEeCCCCcHHHHHHHHHHHCC-------CeEEEEcCCCHHHHHHHHHHhC----CceEEEEcCCCCHHHHHHHHHHH
Confidence 479999999999999999999988 6787765 45666666655542 3577899999999999988764
Q ss_pred -------cCeeEeccCC
Q 014694 89 -------TKLLLNCVGP 98 (420)
Q Consensus 89 -------~dvVIn~aGp 98 (420)
.|+|||++|.
T Consensus 75 ~~~~g~~id~li~~ag~ 91 (253)
T PRK08642 75 TEHFGKPITTVVNNALA 91 (253)
T ss_pred HHHhCCCCeEEEECCCc
Confidence 8999999985
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.55 E-value=2.7e-07 Score=86.40 Aligned_cols=77 Identities=14% Similarity=0.155 Sum_probs=66.0
Q ss_pred EEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc---cC
Q 014694 14 IILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ---TK 90 (420)
Q Consensus 14 vV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~---~d 90 (420)
+|+||+|++|+.++++|++++ ++|++.+|+.++++.+.+++. ...++.++.+|++|++++.++++. .|
T Consensus 1 lItGas~~iG~~~a~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~id 71 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEG-------ARVTIASRSRDRLAAAARALG--GGAPVRTAALDITDEAAVDAFFAEAGPFD 71 (230)
T ss_pred CeecCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHh--cCCceEEEEccCCCHHHHHHHHHhcCCCC
Confidence 589999999999999999988 789999999888877766653 134577899999999999999875 69
Q ss_pred eeEeccCCC
Q 014694 91 LLLNCVGPY 99 (420)
Q Consensus 91 vVIn~aGp~ 99 (420)
++||++|..
T Consensus 72 ~li~~ag~~ 80 (230)
T PRK07041 72 HVVITAADT 80 (230)
T ss_pred EEEECCCCC
Confidence 999999864
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.55 E-value=4.1e-07 Score=85.80 Aligned_cols=83 Identities=14% Similarity=0.044 Sum_probs=65.1
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEec----ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR----NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagR----s~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~ 85 (420)
.+.|+|+||+|++|+.++++|++++ +++++.+| +.++++++.+++.. ...++.++.+|+.|++++.++
T Consensus 6 ~~~ilItGasg~iG~~la~~l~~~g-------~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~ 77 (249)
T PRK12827 6 SRRVLITGGSGGLGRAIAVRLAADG-------ADVIVLDIHPMRGRAEADAVAAGIEA-AGGKALGLAFDVRDFAATRAA 77 (249)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC-------CeEEEEcCcccccHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHH
Confidence 3579999999999999999999987 67877554 45566555555431 234677899999999999888
Q ss_pred Hh-------ccCeeEeccCCCC
Q 014694 86 CS-------QTKLLLNCVGPYR 100 (420)
Q Consensus 86 ~~-------~~dvVIn~aGp~~ 100 (420)
++ ++|+|||++|...
T Consensus 78 ~~~~~~~~~~~d~vi~~ag~~~ 99 (249)
T PRK12827 78 LDAGVEEFGRLDILVNNAGIAT 99 (249)
T ss_pred HHHHHHHhCCCCEEEECCCCCC
Confidence 74 5799999999754
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.55 E-value=3.7e-07 Score=93.44 Aligned_cols=79 Identities=18% Similarity=0.199 Sum_probs=65.7
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
..+|+|+||+|++|+.+++.|++++ .+|++++|+.++++...... ..++..+.+|++|++++.+.+.+.
T Consensus 178 gK~VLITGASgGIG~aLA~~La~~G-------~~Vi~l~r~~~~l~~~~~~~----~~~v~~v~~Dvsd~~~v~~~l~~I 246 (406)
T PRK07424 178 GKTVAVTGASGTLGQALLKELHQQG-------AKVVALTSNSDKITLEINGE----DLPVKTLHWQVGQEAALAELLEKV 246 (406)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHhhc----CCCeEEEEeeCCCHHHHHHHhCCC
Confidence 4579999999999999999999987 78999999987765443321 124567889999999999999999
Q ss_pred CeeEeccCCC
Q 014694 90 KLLLNCVGPY 99 (420)
Q Consensus 90 dvVIn~aGp~ 99 (420)
|++||++|..
T Consensus 247 DiLInnAGi~ 256 (406)
T PRK07424 247 DILIINHGIN 256 (406)
T ss_pred CEEEECCCcC
Confidence 9999999964
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.55 E-value=3.3e-07 Score=86.69 Aligned_cols=82 Identities=18% Similarity=0.144 Sum_probs=67.4
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc-
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~- 88 (420)
...++|+||+|++|+.++++|++++ .+|++.+|+.++++...+++.. ...++.++.+|+.|.++++++++.
T Consensus 5 ~~~~lItG~~g~iG~~~a~~l~~~G-------~~vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 76 (253)
T PRK08217 5 DKVIVITGGAQGLGRAMAEYLAQKG-------AKLALIDLNQEKLEEAVAECGA-LGTEVRGYAANVTDEEDVEATFAQI 76 (253)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHHH
Confidence 3479999999999999999999987 7899999999888777666531 134567889999999988877663
Q ss_pred ------cCeeEeccCCC
Q 014694 89 ------TKLLLNCVGPY 99 (420)
Q Consensus 89 ------~dvVIn~aGp~ 99 (420)
.|+|||++|..
T Consensus 77 ~~~~~~id~vi~~ag~~ 93 (253)
T PRK08217 77 AEDFGQLNGLINNAGIL 93 (253)
T ss_pred HHHcCCCCEEEECCCcc
Confidence 69999999953
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.55 E-value=3.5e-07 Score=87.23 Aligned_cols=82 Identities=15% Similarity=0.115 Sum_probs=65.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh-HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc-
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT-RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~-kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~- 88 (420)
..++|+||+|++|+.++++|++++ ++|++.+|+.+ .++++.+++.. ...++..+.+|+.|++++++++++
T Consensus 9 k~~lVtG~s~gIG~~ia~~l~~~G-------~~v~~~~r~~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~i~~~~~~~ 80 (254)
T PRK06114 9 QVAFVTGAGSGIGQRIAIGLAQAG-------ADVALFDLRTDDGLAETAEHIEA-AGRRAIQIAADVTSKADLRAAVART 80 (254)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC-------CEEEEEeCCcchHHHHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHHH
Confidence 479999999999999999999988 78999999754 45555555531 123567889999999999988764
Q ss_pred ------cCeeEeccCCCC
Q 014694 89 ------TKLLLNCVGPYR 100 (420)
Q Consensus 89 ------~dvVIn~aGp~~ 100 (420)
.|+||||+|...
T Consensus 81 ~~~~g~id~li~~ag~~~ 98 (254)
T PRK06114 81 EAELGALTLAVNAAGIAN 98 (254)
T ss_pred HHHcCCCCEEEECCCCCC
Confidence 599999999653
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.55 E-value=3.5e-07 Score=86.00 Aligned_cols=81 Identities=25% Similarity=0.215 Sum_probs=67.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~-- 88 (420)
..|+|+||+|++|+.+++.|++++ ++|++.+|+.++++.+.+++. ...++.++.+|+.|++++++++++
T Consensus 6 ~~vlItGa~g~iG~~~a~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~ 76 (238)
T PRK05786 6 KKVAIIGVSEGLGYAVAYFALKEG-------AQVCINSRNENKLKRMKKTLS--KYGNIHYVVGDVSSTESARNVIEKAA 76 (238)
T ss_pred cEEEEECCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHH--hcCCeEEEECCCCCHHHHHHHHHHHH
Confidence 479999999999999999999987 799999999988877655553 123577889999999999887764
Q ss_pred -----cCeeEeccCCCC
Q 014694 89 -----TKLLLNCVGPYR 100 (420)
Q Consensus 89 -----~dvVIn~aGp~~ 100 (420)
.|.+||++|.+.
T Consensus 77 ~~~~~id~ii~~ag~~~ 93 (238)
T PRK05786 77 KVLNAIDGLVVTVGGYV 93 (238)
T ss_pred HHhCCCCEEEEcCCCcC
Confidence 489999998654
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.54 E-value=3.4e-07 Score=87.72 Aligned_cols=95 Identities=25% Similarity=0.314 Sum_probs=77.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
++|+|+||||++|++++++|.+++ ++|.++.|+.++..... .++++...|+.++.++...+++.+
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~-------~~v~~~~r~~~~~~~~~--------~~v~~~~~d~~~~~~l~~a~~G~~ 65 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARG-------HEVRAAVRNPEAAAALA--------GGVEVVLGDLRDPKSLVAGAKGVD 65 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCC-------CEEEEEEeCHHHHHhhc--------CCcEEEEeccCCHhHHHHHhcccc
Confidence 479999999999999999999997 89999999999986543 368899999999999999999999
Q ss_pred eeEeccCCCC-------CCcHHHHHHHHHcC--C-cEEec
Q 014694 91 LLLNCVGPYR-------LHGDPVAAACVHSG--C-DYLDI 120 (420)
Q Consensus 91 vVIn~aGp~~-------~~~~~vv~Ac~~~g--~-~yvdi 120 (420)
.++++.+... .....+++++.+++ . |++.+
T Consensus 66 ~~~~i~~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~~~~~ 105 (275)
T COG0702 66 GVLLISGLLDGSDAFRAVQVTAVVRAAEAAGAGVKHGVSL 105 (275)
T ss_pred EEEEEecccccccchhHHHHHHHHHHHHHhcCCceEEEEe
Confidence 9998888443 12355666666655 3 55554
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.54 E-value=4.2e-07 Score=85.81 Aligned_cols=80 Identities=15% Similarity=0.177 Sum_probs=67.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||++.+|+.+++.|++++ .+|++.+|+.++++++.+++.. ...++..+.+|+.|+++++++++
T Consensus 6 k~~lVtGas~GIG~aia~~la~~G-------~~V~~~~r~~~~l~~~~~~i~~-~~~~~~~~~~D~~~~~~~~~~~~~~~ 77 (227)
T PRK08862 6 SIILITSAGSVLGRTISCHFARLG-------ATLILCDQDQSALKDTYEQCSA-LTDNVYSFQLKDFSQESIRHLFDAIE 77 (227)
T ss_pred eEEEEECCccHHHHHHHHHHHHCC-------CEEEEEcCCHHHHHHHHHHHHh-cCCCeEEEEccCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 7899999999999888776642 12346678899999999988764
Q ss_pred -----ccCeeEeccCC
Q 014694 88 -----QTKLLLNCVGP 98 (420)
Q Consensus 88 -----~~dvVIn~aGp 98 (420)
+.|++||++|.
T Consensus 78 ~~~g~~iD~li~nag~ 93 (227)
T PRK08862 78 QQFNRAPDVLVNNWTS 93 (227)
T ss_pred HHhCCCCCEEEECCcc
Confidence 57999999984
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.54 E-value=4e-07 Score=86.15 Aligned_cols=82 Identities=15% Similarity=0.159 Sum_probs=65.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEE-ecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc-
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA-GRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~ia-gRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~- 88 (420)
..++|+||+|++|+.++++|++++ .++++. .|+.++++++.+++.. ...++.++.+|++|++++.+++++
T Consensus 7 ~~~lItG~s~~iG~~la~~l~~~g-------~~v~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 78 (247)
T PRK12935 7 KVAIVTGGAKGIGKAITVALAQEG-------AKVVINYNSSKEAAENLVNELGK-EGHDVYAVQADVSKVEDANRLVEEA 78 (247)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcC-------CEEEEEcCCcHHHHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHH
Confidence 479999999999999999999987 677664 4566777666665531 123577899999999999998876
Q ss_pred ------cCeeEeccCCCC
Q 014694 89 ------TKLLLNCVGPYR 100 (420)
Q Consensus 89 ------~dvVIn~aGp~~ 100 (420)
.|+||||+|...
T Consensus 79 ~~~~~~id~vi~~ag~~~ 96 (247)
T PRK12935 79 VNHFGKVDILVNNAGITR 96 (247)
T ss_pred HHHcCCCCEEEECCCCCC
Confidence 699999999754
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.54 E-value=5.4e-07 Score=86.18 Aligned_cols=80 Identities=20% Similarity=0.172 Sum_probs=63.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|++|+.++++|++++ ++|++++|+.+.. +..+++.. ...++.++.+|+.|+++++++++
T Consensus 7 ~~~lItG~s~giG~~la~~l~~~G-------~~Vv~~~r~~~~~-~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~ 77 (263)
T PRK08226 7 KTALITGALQGIGEGIARVFARHG-------ANLILLDISPEIE-KLADELCG-RGHRCTAVVADVRDPASVAAAIKRAK 77 (263)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCC-------CEEEEecCCHHHH-HHHHHHHH-hCCceEEEECCCCCHHHHHHHHHHHH
Confidence 479999999999999999999988 7899999987533 33333321 12356788999999999998876
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 78 ~~~~~id~vi~~ag~~ 93 (263)
T PRK08226 78 EKEGRIDILVNNAGVC 93 (263)
T ss_pred HHcCCCCEEEECCCcC
Confidence 469999999964
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.54 E-value=1e-06 Score=83.37 Aligned_cols=82 Identities=17% Similarity=0.098 Sum_probs=62.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEE-ecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA-GRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~ia-gRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..++|+||||++|+.++++|++++ .++++. +|+..+.++..+++.. ...++..+.+|+.|.+++.++++
T Consensus 4 k~~lVtG~s~giG~~~a~~l~~~G-------~~vv~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 75 (246)
T PRK12938 4 RIAYVTGGMGGIGTSICQRLHKDG-------FKVVAGCGPNSPRRVKWLEDQKA-LGFDFIASEGNVGDWDSTKAAFDKV 75 (246)
T ss_pred CEEEEECCCChHHHHHHHHHHHcC-------CEEEEEcCCChHHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 468999999999999999999998 667664 4555555555554421 12345677899999999988775
Q ss_pred -----ccCeeEeccCCCC
Q 014694 88 -----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (420)
..|+||||+|...
T Consensus 76 ~~~~~~id~li~~ag~~~ 93 (246)
T PRK12938 76 KAEVGEIDVLVNNAGITR 93 (246)
T ss_pred HHHhCCCCEEEECCCCCC
Confidence 4799999999643
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.54 E-value=4.1e-07 Score=86.16 Aligned_cols=80 Identities=16% Similarity=0.144 Sum_probs=64.1
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEE-ecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA-GRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~ia-gRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
.|+|+||+|++|+.++++|++++ .++++. .|+.++++.+.+++.. ...++.++.+|+.|++++.++++
T Consensus 4 ~ilItGas~giG~~la~~l~~~g-------~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~ 75 (248)
T PRK06947 4 VVLITGASRGIGRATAVLAAARG-------WSVGINYARDAAAAEETADAVRA-AGGRACVVAGDVANEADVIAMFDAVQ 75 (248)
T ss_pred EEEEeCCCCcHHHHHHHHHHHCC-------CEEEEEeCCCHHHHHHHHHHHHh-cCCcEEEEEeccCCHHHHHHHHHHHH
Confidence 69999999999999999999987 677665 4677777666665532 12357789999999999887765
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 76 ~~~~~id~li~~ag~~ 91 (248)
T PRK06947 76 SAFGRLDALVNNAGIV 91 (248)
T ss_pred HhcCCCCEEEECCccC
Confidence 479999999964
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.54 E-value=3.3e-07 Score=87.40 Aligned_cols=81 Identities=17% Similarity=0.190 Sum_probs=66.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcce-EEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKS-LALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~-v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..|+|+||+|++|+.++++|++++ .+ |++.+|+.++++...+++.. ...++.++.+|++|++++.++++
T Consensus 7 k~vlItGa~g~iG~~la~~l~~~G-------~~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 78 (260)
T PRK06198 7 KVALVTGGTQGLGAAIARAFAERG-------AAGLVICGRNAEKGEAQAAELEA-LGAKAVFVQADLSDVEDCRRVVAAA 78 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCC-------CCeEEEEcCCHHHHHHHHHHHHh-cCCeEEEEEccCCCHHHHHHHHHHH
Confidence 479999999999999999999987 56 99999998887766655531 12356778999999999988876
Q ss_pred -----ccCeeEeccCCC
Q 014694 88 -----QTKLLLNCVGPY 99 (420)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (420)
++|+|||++|..
T Consensus 79 ~~~~g~id~li~~ag~~ 95 (260)
T PRK06198 79 DEAFGRLDALVNAAGLT 95 (260)
T ss_pred HHHhCCCCEEEECCCcC
Confidence 469999999964
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.53 E-value=3.5e-07 Score=87.29 Aligned_cols=82 Identities=23% Similarity=0.228 Sum_probs=67.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~-~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..++|+||+|++|+.+++.|++++ ++|++++|+.++++++.+++... ...++.++.+|+.|++++.+++.
T Consensus 10 k~~lItGa~~gIG~~~a~~l~~~G-------~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 82 (257)
T PRK09242 10 QTALITGASKGIGLAIAREFLGLG-------ADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWV 82 (257)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 479999999999999999999988 78999999999888777766420 12356788999999998887765
Q ss_pred -----ccCeeEeccCCC
Q 014694 88 -----QTKLLLNCVGPY 99 (420)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 83 ~~~~g~id~li~~ag~~ 99 (257)
T PRK09242 83 EDHWDGLHILVNNAGGN 99 (257)
T ss_pred HHHcCCCCEEEECCCCC
Confidence 469999999963
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=98.53 E-value=4.2e-07 Score=86.05 Aligned_cols=79 Identities=22% Similarity=0.222 Sum_probs=62.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh-HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT-RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~-kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
.+|+|+||+|++|+.++++|++++ ++|++.+|+.. ++.+..+++ ..++.++.+|++|++++.++++
T Consensus 6 k~vlItGas~gIG~~ia~~l~~~G-------~~vi~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~ 74 (248)
T TIGR01832 6 KVALVTGANTGLGQGIAVGLAEAG-------ADIVGAGRSEPSETQQQVEAL----GRRFLSLTADLSDIEAIKALVDSA 74 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC-------CEEEEEcCchHHHHHHHHHhc----CCceEEEECCCCCHHHHHHHHHHH
Confidence 479999999999999999999988 78999999752 222223322 2457889999999999987765
Q ss_pred -----ccCeeEeccCCCC
Q 014694 88 -----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (420)
+.|+|||++|...
T Consensus 75 ~~~~~~~d~li~~ag~~~ 92 (248)
T TIGR01832 75 VEEFGHIDILVNNAGIIR 92 (248)
T ss_pred HHHcCCCCEEEECCCCCC
Confidence 4799999999643
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.52 E-value=4.7e-07 Score=85.67 Aligned_cols=80 Identities=24% Similarity=0.169 Sum_probs=62.9
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEe-cChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAG-RNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iag-Rs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
.++|+||+|++|+.++++|++++ .++++.. |++++++.+.+.+.. ...++.++.+|++|.+++.++++
T Consensus 4 ~~lVtG~~~~iG~~~a~~l~~~G-------~~vv~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~ 75 (248)
T PRK06123 4 VMIITGASRGIGAATALLAAERG-------YAVCLNYLRNRDAAEAVVQAIRR-QGGEALAVAADVADEADVLRLFEAVD 75 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCC-------CeEEEecCCCHHHHHHHHHHHHh-CCCcEEEEEeccCCHHHHHHHHHHHH
Confidence 59999999999999999999987 5677766 556666665555421 12346688999999999998876
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 76 ~~~~~id~li~~ag~~ 91 (248)
T PRK06123 76 RELGRLDALVNNAGIL 91 (248)
T ss_pred HHhCCCCEEEECCCCC
Confidence 469999999975
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.52 E-value=5.7e-07 Score=84.85 Aligned_cols=82 Identities=12% Similarity=0.193 Sum_probs=63.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCC--HHHHHHHH--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTD--PPSLHRLC-- 86 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d--~~sl~~~~-- 86 (420)
.+++|+||+|++|+.+++.|++++ .+|++.+|+.++++++.+++......++.++.+|+.| .+++.+++
T Consensus 7 k~vlItG~sggiG~~la~~l~~~g-------~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 79 (239)
T PRK08703 7 KTILVTGASQGLGEQVAKAYAAAG-------ATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAAT 79 (239)
T ss_pred CEEEEECCCCcHHHHHHHHHHHcC-------CEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHH
Confidence 479999999999999999999987 7899999999988877776532112346678899875 34555443
Q ss_pred ------hccCeeEeccCCC
Q 014694 87 ------SQTKLLLNCVGPY 99 (420)
Q Consensus 87 ------~~~dvVIn~aGp~ 99 (420)
...|+|||++|..
T Consensus 80 i~~~~~~~id~vi~~ag~~ 98 (239)
T PRK08703 80 IAEATQGKLDGIVHCAGYF 98 (239)
T ss_pred HHHHhCCCCCEEEEecccc
Confidence 3579999999953
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.52 E-value=6.9e-07 Score=85.28 Aligned_cols=79 Identities=18% Similarity=0.172 Sum_probs=63.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh-HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT-RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~-kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..++|+||+++||+.++++|++++ ++|++.+|+.. ++.+..++. ..++.++.+|++|+++++++++
T Consensus 9 k~~lItGas~gIG~aia~~l~~~G-------~~vv~~~~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~ 77 (251)
T PRK12481 9 KVAIITGCNTGLGQGMAIGLAKAG-------ADIVGVGVAEAPETQAQVEAL----GRKFHFITADLIQQKDIDSIVSQA 77 (251)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC-------CEEEEecCchHHHHHHHHHHc----CCeEEEEEeCCCCHHHHHHHHHHH
Confidence 469999999999999999999998 78988888643 333333332 2467789999999999999876
Q ss_pred -----ccCeeEeccCCCC
Q 014694 88 -----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (420)
+.|++||++|...
T Consensus 78 ~~~~g~iD~lv~~ag~~~ 95 (251)
T PRK12481 78 VEVMGHIDILINNAGIIR 95 (251)
T ss_pred HHHcCCCCEEEECCCcCC
Confidence 4699999999654
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.51 E-value=4.1e-07 Score=86.57 Aligned_cols=74 Identities=20% Similarity=0.249 Sum_probs=61.9
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc-
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~- 88 (420)
...++|+||+|++|+.++++|++++ .+|++++|+.++. . ...++.++.+|+.|++++.+++++
T Consensus 6 ~k~~lItGas~gIG~~la~~l~~~g-------~~v~~~~r~~~~~------~---~~~~~~~~~~D~~~~~~~~~~~~~~ 69 (252)
T PRK07856 6 GRVVLVTGGTRGIGAGIARAFLAAG-------ATVVVCGRRAPET------V---DGRPAEFHAADVRDPDQVAALVDAI 69 (252)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEeCChhhh------h---cCCceEEEEccCCCHHHHHHHHHHH
Confidence 3579999999999999999999987 7899999987651 1 124577899999999999988764
Q ss_pred ------cCeeEeccCCC
Q 014694 89 ------TKLLLNCVGPY 99 (420)
Q Consensus 89 ------~dvVIn~aGp~ 99 (420)
.|+|||++|..
T Consensus 70 ~~~~~~id~vi~~ag~~ 86 (252)
T PRK07856 70 VERHGRLDVLVNNAGGS 86 (252)
T ss_pred HHHcCCCCEEEECCCCC
Confidence 49999999964
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=98.51 E-value=3.3e-07 Score=87.58 Aligned_cols=81 Identities=23% Similarity=0.251 Sum_probs=65.9
Q ss_pred eEEEEcCCcHHHHHHHHHHHH----hCCCCCCCcceEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHH
Q 014694 12 DVIILGASGFTGKYVVREALK----LFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~----~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~-~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
.++|+||++++|+.++++|++ .+ .+|++.+|+.++++++.+++... ...++.++.+|++|++++++++
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g-------~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~ 74 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPG-------SVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLL 74 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCC-------cEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHH
Confidence 489999999999999999997 34 78999999999998888777420 1235678899999999998887
Q ss_pred hcc-----------CeeEeccCCC
Q 014694 87 SQT-----------KLLLNCVGPY 99 (420)
Q Consensus 87 ~~~-----------dvVIn~aGp~ 99 (420)
+.+ ++|||++|..
T Consensus 75 ~~~~~~~g~~~~~~~~lv~nAG~~ 98 (256)
T TIGR01500 75 KALRELPRPKGLQRLLLINNAGTL 98 (256)
T ss_pred HHHHhccccCCCceEEEEeCCccc
Confidence 532 4899999964
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.51 E-value=4.8e-07 Score=89.49 Aligned_cols=85 Identities=20% Similarity=0.169 Sum_probs=72.9
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~-~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
...++|||||..||..+|+.|+.++ .+|++++||.++.++.++++.. ....++.++++|+.|..++.+++.
T Consensus 35 ~~~~vVTGansGIG~eta~~La~~G-------a~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~ 107 (314)
T KOG1208|consen 35 GKVALVTGATSGIGFETARELALRG-------AHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEE 107 (314)
T ss_pred CcEEEEECCCCchHHHHHHHHHhCC-------CEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHH
Confidence 3579999999999999999999998 8999999999998888888764 223456779999999999999886
Q ss_pred ------ccCeeEeccCCCCC
Q 014694 88 ------QTKLLLNCVGPYRL 101 (420)
Q Consensus 88 ------~~dvVIn~aGp~~~ 101 (420)
..|++||+||.+..
T Consensus 108 ~~~~~~~ldvLInNAGV~~~ 127 (314)
T KOG1208|consen 108 FKKKEGPLDVLINNAGVMAP 127 (314)
T ss_pred HHhcCCCccEEEeCcccccC
Confidence 36999999997654
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.51 E-value=5.7e-07 Score=84.80 Aligned_cols=81 Identities=19% Similarity=0.144 Sum_probs=63.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC-hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs-~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..++|+||+|++|+.++++|++++ +++++..|+ .+..+++.+++.. ...++.++.+|++|++++.++++
T Consensus 6 ~~vlItG~~~~iG~~la~~l~~~g-------~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~ 77 (245)
T PRK12937 6 KVAIVTGASRGIGAAIARRLAADG-------FAVAVNYAGSAAAADELVAEIEA-AGGRAIAVQADVADAAAVTRLFDAA 77 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC-------CEEEEecCCCHHHHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHH
Confidence 479999999999999999999998 677776665 3445555554421 23467889999999999999887
Q ss_pred -----ccCeeEeccCCC
Q 014694 88 -----QTKLLLNCVGPY 99 (420)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 78 ~~~~~~id~vi~~ag~~ 94 (245)
T PRK12937 78 ETAFGRIDVLVNNAGVM 94 (245)
T ss_pred HHHcCCCCEEEECCCCC
Confidence 579999999964
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=98.50 E-value=6.6e-07 Score=88.57 Aligned_cols=82 Identities=22% Similarity=0.165 Sum_probs=68.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||++.||+.+++.|++++. ++|++++|+.++++++.+++.. ...++.++.+|++|.++++++++
T Consensus 4 k~vlITGas~GIG~aia~~L~~~G~------~~V~l~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~ 76 (314)
T TIGR01289 4 PTVIITGASSGLGLYAAKALAATGE------WHVIMACRDFLKAEQAAKSLGM-PKDSYTIMHLDLGSLDSVRQFVQQFR 76 (314)
T ss_pred CEEEEECCCChHHHHHHHHHHHcCC------CEEEEEeCCHHHHHHHHHHhcC-CCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 3799999999999999999999872 6899999999988888777642 12356778899999999988775
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
..|++||+||.+
T Consensus 77 ~~~~~iD~lI~nAG~~ 92 (314)
T TIGR01289 77 ESGRPLDALVCNAAVY 92 (314)
T ss_pred HhCCCCCEEEECCCcc
Confidence 479999999964
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.50 E-value=3.6e-07 Score=86.15 Aligned_cols=80 Identities=15% Similarity=0.117 Sum_probs=64.0
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEE-EecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc--
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLAL-AGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~i-agRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~-- 88 (420)
.++|+||+|++|+.+++.|++++ ++|++ ..|+.+++++...++.. ...++.++.+|+.|++++++++++
T Consensus 3 ~~lItGa~g~iG~~l~~~l~~~g-------~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~i~~~~~~~~ 74 (247)
T PRK09730 3 IALVTGGSRGIGRATALLLAQEG-------YTVAVNYQQNLHAAQEVVNLITQ-AGGKAFVLQADISDENQVVAMFTAID 74 (247)
T ss_pred EEEEeCCCchHHHHHHHHHHHCC-------CEEEEEeCCChHHHHHHHHHHHh-CCCeEEEEEccCCCHHHHHHHHHHHH
Confidence 58999999999999999999987 67766 46887777666655431 123567899999999999998775
Q ss_pred -----cCeeEeccCCC
Q 014694 89 -----TKLLLNCVGPY 99 (420)
Q Consensus 89 -----~dvVIn~aGp~ 99 (420)
.|+|||++|..
T Consensus 75 ~~~~~id~vi~~ag~~ 90 (247)
T PRK09730 75 QHDEPLAALVNNAGIL 90 (247)
T ss_pred HhCCCCCEEEECCCCC
Confidence 47999999964
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.50 E-value=5.5e-07 Score=84.76 Aligned_cols=76 Identities=13% Similarity=0.164 Sum_probs=61.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~-- 88 (420)
..++|+||+|++|+.++++|++++ .+|++.+|+.++..+.++.. ++.++.+|+.|++++.+++.+
T Consensus 3 k~vlItGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~~~~~ 69 (236)
T PRK06483 3 APILITGAGQRIGLALAWHLLAQG-------QPVIVSYRTHYPAIDGLRQA------GAQCIQADFSTNAGIMAFIDELK 69 (236)
T ss_pred ceEEEECCCChHHHHHHHHHHHCC-------CeEEEEeCCchhHHHHHHHc------CCEEEEcCCCCHHHHHHHHHHHH
Confidence 369999999999999999999988 79999999876543333322 357889999999998887653
Q ss_pred -----cCeeEeccCCC
Q 014694 89 -----TKLLLNCVGPY 99 (420)
Q Consensus 89 -----~dvVIn~aGp~ 99 (420)
.|++||++|..
T Consensus 70 ~~~~~id~lv~~ag~~ 85 (236)
T PRK06483 70 QHTDGLRAIIHNASDW 85 (236)
T ss_pred hhCCCccEEEECCccc
Confidence 79999999964
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.50 E-value=6.9e-07 Score=87.19 Aligned_cols=83 Identities=16% Similarity=0.041 Sum_probs=66.9
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh---------hHHHHHHHHhCCCCCCCccEEEEeCCCHH
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP---------TRVKQALQWASPSHSLSIPILTADTTDPP 80 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~---------~kl~~~~~~l~~~~~~~~~~i~~D~~d~~ 80 (420)
...++|+||++.||+.+++.|++++ .++++.+|+. ++++++.+++.. ...++.++.+|++|++
T Consensus 6 ~k~~lITGas~GIG~aia~~la~~G-------~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~Dv~~~~ 77 (286)
T PRK07791 6 GRVVIVTGAGGGIGRAHALAFAAEG-------ARVVVNDIGVGLDGSASGGSAAQAVVDEIVA-AGGEAVANGDDIADWD 77 (286)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CEEEEeeCCccccccccchhHHHHHHHHHHh-cCCceEEEeCCCCCHH
Confidence 3479999999999999999999988 7888888876 677777766632 1235667889999999
Q ss_pred HHHHHHh-------ccCeeEeccCCCC
Q 014694 81 SLHRLCS-------QTKLLLNCVGPYR 100 (420)
Q Consensus 81 sl~~~~~-------~~dvVIn~aGp~~ 100 (420)
++.++++ ..|++||++|...
T Consensus 78 ~v~~~~~~~~~~~g~id~lv~nAG~~~ 104 (286)
T PRK07791 78 GAANLVDAAVETFGGLDVLVNNAGILR 104 (286)
T ss_pred HHHHHHHHHHHhcCCCCEEEECCCCCC
Confidence 9888775 4699999999753
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.49 E-value=7.7e-07 Score=84.37 Aligned_cols=84 Identities=14% Similarity=0.167 Sum_probs=65.2
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCC--CHHHHHHHH
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTT--DPPSLHRLC 86 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~--d~~sl~~~~ 86 (420)
+...++|+||+|++|..++++|++.+ ++|++.+|+.++++++.+++......++.++.+|++ +++++.+++
T Consensus 11 ~~k~vlItG~~g~iG~~la~~l~~~G-------~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~ 83 (247)
T PRK08945 11 KDRIILVTGAGDGIGREAALTYARHG-------ATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLA 83 (247)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCC-------CcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHH
Confidence 44579999999999999999999987 789999999988877776664211235667888886 566665554
Q ss_pred h-------ccCeeEeccCCC
Q 014694 87 S-------QTKLLLNCVGPY 99 (420)
Q Consensus 87 ~-------~~dvVIn~aGp~ 99 (420)
+ ..|+|||++|..
T Consensus 84 ~~~~~~~~~id~vi~~Ag~~ 103 (247)
T PRK08945 84 DTIEEQFGRLDGVLHNAGLL 103 (247)
T ss_pred HHHHHHhCCCCEEEECCccc
Confidence 3 579999999863
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.49 E-value=9.3e-07 Score=79.85 Aligned_cols=83 Identities=12% Similarity=0.075 Sum_probs=67.5
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
...++|+||++++|+.+++.|++.+ .+|.+.+|+.+.++...+++.. ...+..++.+|++|.+++.++++
T Consensus 16 gk~~lVTGa~~GIG~aia~~l~~~G-------~~V~l~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~v~~~v~~~ 87 (169)
T PRK06720 16 GKVAIVTGGGIGIGRNTALLLAKQG-------AKVIVTDIDQESGQATVEEITN-LGGEALFVSYDMEKQGDWQRVISIT 87 (169)
T ss_pred CCEEEEecCCChHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHH
Confidence 4579999999999999999999987 7899999998887766666531 12345678999999998888664
Q ss_pred -----ccCeeEeccCCCC
Q 014694 88 -----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (420)
+.|++||++|.+.
T Consensus 88 ~~~~G~iDilVnnAG~~~ 105 (169)
T PRK06720 88 LNAFSRIDMLFQNAGLYK 105 (169)
T ss_pred HHHcCCCCEEEECCCcCC
Confidence 5899999999654
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.49 E-value=6.5e-07 Score=85.12 Aligned_cols=80 Identities=15% Similarity=0.088 Sum_probs=64.3
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
...++|+||+|++|++++++|++++ .+|++++|+.+.. +...++. ..++..+.+|+.|++++.+++.
T Consensus 15 ~k~vlItGas~~IG~~la~~l~~~G-------~~Vi~~~r~~~~~-~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~ 83 (255)
T PRK06841 15 GKVAVVTGGASGIGHAIAELFAAKG-------ARVALLDRSEDVA-EVAAQLL---GGNAKGLVCDVSDSQSVEAAVAAV 83 (255)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHH-HHHHHhh---CCceEEEEecCCCHHHHHHHHHHH
Confidence 3479999999999999999999988 7899999987653 3334332 2345688999999999988876
Q ss_pred -----ccCeeEeccCCCC
Q 014694 88 -----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (420)
..|+|||++|...
T Consensus 84 ~~~~~~~d~vi~~ag~~~ 101 (255)
T PRK06841 84 ISAFGRIDILVNSAGVAL 101 (255)
T ss_pred HHHhCCCCEEEECCCCCC
Confidence 4699999999643
|
|
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=98.49 E-value=9.5e-07 Score=81.34 Aligned_cols=109 Identities=13% Similarity=0.064 Sum_probs=78.4
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
+..+++|+||||.+|+.+++.|++.+ .+|.+.+|+.++++++.+.+.. ..+..+..+|..|.+++.+.+++
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g-------~~V~l~~R~~~~~~~l~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~ 97 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREG-------ARVVLVGRDLERAQKAADSLRA--RFGEGVGAVETSDDAARAAAIKG 97 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEcCCHHHHHHHHHHHHh--hcCCcEEEeeCCCHHHHHHHHhc
Confidence 34589999999999999999999877 6899999999999888776631 12456777899999999999999
Q ss_pred cCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHHH
Q 014694 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFM 127 (420)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~~ 127 (420)
+|+||++..-.. +.....+.+.+.+.-.+|+.-.++.-
T Consensus 98 ~diVi~at~~g~-~~~~~~~~~~~~~~vv~D~~~~~~~~ 135 (194)
T cd01078 98 ADVVFAAGAAGV-ELLEKLAWAPKPLAVAADVNAVPPVG 135 (194)
T ss_pred CCEEEECCCCCc-eechhhhcccCceeEEEEccCCCCCC
Confidence 999999764322 21112222222244577776544443
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=98.49 E-value=5.9e-07 Score=84.43 Aligned_cols=80 Identities=18% Similarity=0.148 Sum_probs=63.6
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEec-ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagR-s~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
.++|+||+|++|+.++++|++++ +++++..| +.+++++..+++.. ...++.++.+|+.|++++.++++
T Consensus 2 ~~lItG~sg~iG~~la~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~ 73 (242)
T TIGR01829 2 IALVTGGMGGIGTAICQRLAKDG-------YRVAANCGPNEERAEAWLQEQGA-LGFDFRVVEGDVSSFESCKAAVAKVE 73 (242)
T ss_pred EEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCCHHHHHHHHHHHHh-hCCceEEEEecCCCHHHHHHHHHHHH
Confidence 58999999999999999999988 78888887 66666655544421 12467789999999999888765
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 74 ~~~~~id~vi~~ag~~ 89 (242)
T TIGR01829 74 AELGPIDVLVNNAGIT 89 (242)
T ss_pred HHcCCCcEEEECCCCC
Confidence 479999999864
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.48 E-value=8.6e-07 Score=83.24 Aligned_cols=76 Identities=16% Similarity=0.170 Sum_probs=61.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEec-ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc-
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagR-s~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~- 88 (420)
..|+|+||+|++|+.++++|++++ .++++..| +.++++++.+++ ++.++.+|++|.+++.+.++.
T Consensus 7 k~vlItGasggIG~~~a~~l~~~G-------~~v~~~~~~~~~~~~~l~~~~------~~~~~~~D~~~~~~~~~~~~~~ 73 (237)
T PRK12742 7 KKVLVLGGSRGIGAAIVRRFVTDG-------ANVRFTYAGSKDAAERLAQET------GATAVQTDSADRDAVIDVVRKS 73 (237)
T ss_pred CEEEEECCCChHHHHHHHHHHHCC-------CEEEEecCCCHHHHHHHHHHh------CCeEEecCCCCHHHHHHHHHHh
Confidence 479999999999999999999987 67877765 566666665544 246788999999988888764
Q ss_pred --cCeeEeccCCC
Q 014694 89 --TKLLLNCVGPY 99 (420)
Q Consensus 89 --~dvVIn~aGp~ 99 (420)
.|+|||++|..
T Consensus 74 ~~id~li~~ag~~ 86 (237)
T PRK12742 74 GALDILVVNAGIA 86 (237)
T ss_pred CCCcEEEECCCCC
Confidence 79999999964
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=98.48 E-value=1.2e-06 Score=93.62 Aligned_cols=111 Identities=10% Similarity=0.130 Sum_probs=77.1
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh---HHHHHHHHhC---------C--C------CCCC
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT---RVKQALQWAS---------P--S------HSLS 68 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~---kl~~~~~~l~---------~--~------~~~~ 68 (420)
+...|+|||||||+|+.+++.|++..+. ..+|.+..|..+ ..+++.+++. . . ...+
T Consensus 118 ~~k~VlVTGaTGFLGk~LlekLLr~~~~----v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~K 193 (605)
T PLN02503 118 RGKNFLITGATGFLAKVLIEKILRTNPD----VGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSK 193 (605)
T ss_pred cCCEEEEcCCchHHHHHHHHHHHHhCCC----CcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCcccccccccc
Confidence 4568999999999999999999987632 147888888542 2222221210 0 0 1246
Q ss_pred ccEEEEeCCCH------HHHHHHHhccCeeEeccCCCCCC-------------cHHHHHHHHHcC-C-cEEecCCc
Q 014694 69 IPILTADTTDP------PSLHRLCSQTKLLLNCVGPYRLH-------------GDPVAAACVHSG-C-DYLDISGE 123 (420)
Q Consensus 69 ~~~i~~D~~d~------~sl~~~~~~~dvVIn~aGp~~~~-------------~~~vv~Ac~~~g-~-~yvdisge 123 (420)
+.++.+|++++ +..+.+.+++|+|||+|+..... ..+++++|.+.+ . +++.+|..
T Consensus 194 i~~v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTa 269 (605)
T PLN02503 194 LVPVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTA 269 (605)
T ss_pred EEEEEeeCCCcccCCCHHHHHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCc
Confidence 78899999986 46677778899999999976532 177888888764 3 46666643
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.48 E-value=7.5e-07 Score=85.13 Aligned_cols=78 Identities=12% Similarity=0.116 Sum_probs=63.2
Q ss_pred ceEEEEcCC--cHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 11 FDVIILGAS--GFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 11 ~~IvV~GAT--G~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
..++|+||+ +.||+.+++.|++++ .+|++.+|+. ++++..+++. ..++.++.+|++|+++++++++
T Consensus 8 k~~lItGas~~~gIG~a~a~~la~~G-------~~Vi~~~r~~-~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~ 76 (252)
T PRK06079 8 KKIVVMGVANKRSIAWGCAQAIKDQG-------ATVIYTYQND-RMKKSLQKLV---DEEDLLVECDVASDESIERAFAT 76 (252)
T ss_pred CEEEEeCCCCCCchHHHHHHHHHHCC-------CEEEEecCch-HHHHHHHhhc---cCceeEEeCCCCCHHHHHHHHHH
Confidence 479999999 799999999999998 7899999984 4444455543 2356789999999999988765
Q ss_pred ------ccCeeEeccCCC
Q 014694 88 ------QTKLLLNCVGPY 99 (420)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (420)
+.|++||++|..
T Consensus 77 ~~~~~g~iD~lv~nAg~~ 94 (252)
T PRK06079 77 IKERVGKIDGIVHAIAYA 94 (252)
T ss_pred HHHHhCCCCEEEEccccc
Confidence 479999999964
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=98.48 E-value=4.4e-07 Score=85.03 Aligned_cols=79 Identities=14% Similarity=0.174 Sum_probs=62.6
Q ss_pred EEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh-hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc---
Q 014694 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ--- 88 (420)
Q Consensus 13 IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~-~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~--- 88 (420)
|+|+|++|++|+.++++|++++ +++++++|+. ++++.+.+.+.. ...++.++.+|++|+++++++++.
T Consensus 1 vlItG~~g~iG~~la~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~ 72 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEG-------AKVIITYRSSEEGAEEVVEELKA-YGVKALGVVCDVSDREDVKAVVEEIEE 72 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCCchhHHHHHHHHHHh-cCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 5899999999999999999987 7899998875 455555444421 123567899999999999888764
Q ss_pred ----cCeeEeccCCC
Q 014694 89 ----TKLLLNCVGPY 99 (420)
Q Consensus 89 ----~dvVIn~aGp~ 99 (420)
.|+|||++|..
T Consensus 73 ~~~~id~vi~~ag~~ 87 (239)
T TIGR01830 73 ELGPIDILVNNAGIT 87 (239)
T ss_pred HhCCCCEEEECCCCC
Confidence 59999999964
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=98.48 E-value=5.7e-07 Score=86.50 Aligned_cols=81 Identities=12% Similarity=0.124 Sum_probs=61.2
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEec-ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHH----HHH
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-NPTRVKQALQWASPSHSLSIPILTADTTDPPSLH----RLC 86 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagR-s~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~----~~~ 86 (420)
.++|+||+|+||+.+++.|++++ .+|++.+| +.++++++.+++......++.++.+|++|.+++. +++
T Consensus 3 ~~lITGas~gIG~~~a~~l~~~G-------~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~ 75 (267)
T TIGR02685 3 AAVVTGAAKRIGSSIAVALHQEG-------YRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAII 75 (267)
T ss_pred EEEEeCCCCcHHHHHHHHHHhCC-------CeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHH
Confidence 68999999999999999999988 78887664 5677777776663211224557889999987553 333
Q ss_pred -------hccCeeEeccCCC
Q 014694 87 -------SQTKLLLNCVGPY 99 (420)
Q Consensus 87 -------~~~dvVIn~aGp~ 99 (420)
...|+|||++|.+
T Consensus 76 ~~~~~~~g~iD~lv~nAG~~ 95 (267)
T TIGR02685 76 DACFRAFGRCDVLVNNASAF 95 (267)
T ss_pred HHHHHccCCceEEEECCccC
Confidence 2589999999964
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=98.47 E-value=4.6e-07 Score=87.69 Aligned_cols=84 Identities=13% Similarity=0.099 Sum_probs=60.2
Q ss_pred EEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccCee
Q 014694 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKLL 92 (420)
Q Consensus 13 IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~dvV 92 (420)
|+|+|||||+|++++++|++.+ ++|.+.+|+.++..... .....|+.+ ..+.+.+.++|+|
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~-----------~~~~~~~~~-~~~~~~~~~~D~V 61 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDG-------HEVTILTRSPPAGANTK-----------WEGYKPWAP-LAESEALEGADAV 61 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcC-------CEEEEEeCCCCCCCccc-----------ceeeecccc-cchhhhcCCCCEE
Confidence 6899999999999999999987 89999999887643211 001123322 4456677899999
Q ss_pred EeccCCCCCC------------------cHHHHHHHHHcCC
Q 014694 93 LNCVGPYRLH------------------GDPVAAACVHSGC 115 (420)
Q Consensus 93 In~aGp~~~~------------------~~~vv~Ac~~~g~ 115 (420)
|||+|..... ..+++++|.++++
T Consensus 62 vh~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~ 102 (292)
T TIGR01777 62 INLAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAAEQ 102 (292)
T ss_pred EECCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhcCC
Confidence 9999964321 2567788887775
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.45 E-value=6.5e-07 Score=85.74 Aligned_cols=83 Identities=17% Similarity=0.154 Sum_probs=67.1
Q ss_pred cceEEEEcCCc-HHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHh
Q 014694 10 LFDVIILGASG-FTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 10 ~~~IvV~GATG-~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~-~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
...++|+||+| .+|+.+++.|++++ .+|++.+|+.+++++..+++... ...++.++.+|++|+++++++++
T Consensus 17 ~k~vlItG~sg~gIG~~ia~~l~~~G-------~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 89 (262)
T PRK07831 17 GKVVLVTAAAGTGIGSATARRALEEG-------ARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALID 89 (262)
T ss_pred CCEEEEECCCcccHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHH
Confidence 35799999997 69999999999988 78999999998887776655310 11356788999999999988876
Q ss_pred -------ccCeeEeccCCC
Q 014694 88 -------QTKLLLNCVGPY 99 (420)
Q Consensus 88 -------~~dvVIn~aGp~ 99 (420)
..|+||||+|..
T Consensus 90 ~~~~~~g~id~li~~ag~~ 108 (262)
T PRK07831 90 AAVERLGRLDVLVNNAGLG 108 (262)
T ss_pred HHHHHcCCCCEEEECCCCC
Confidence 469999999953
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.45 E-value=8.8e-07 Score=84.59 Aligned_cols=81 Identities=15% Similarity=0.134 Sum_probs=64.7
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEec-ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagR-s~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
.++|+||+|++|+.++++|++++ ++|++..| +.++++.+.+++.. ...++.++.+|++|++++++++.
T Consensus 4 ~vlItGas~giG~~~a~~l~~~G-------~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~ 75 (256)
T PRK12743 4 VAIVTASDSGIGKACALLLAQQG-------FDIGITWHSDEEGAKETAEEVRS-HGVRAEIRQLDLSDLPEGAQALDKLI 75 (256)
T ss_pred EEEEECCCchHHHHHHHHHHHCC-------CEEEEEeCCChHHHHHHHHHHHh-cCCceEEEEccCCCHHHHHHHHHHHH
Confidence 69999999999999999999998 78877754 66666666655531 23467889999999999888776
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
..|+|||++|...
T Consensus 76 ~~~~~id~li~~ag~~~ 92 (256)
T PRK12743 76 QRLGRIDVLVNNAGAMT 92 (256)
T ss_pred HHcCCCCEEEECCCCCC
Confidence 4699999999643
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.45 E-value=7e-07 Score=96.91 Aligned_cols=81 Identities=20% Similarity=0.186 Sum_probs=69.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||||++|+.+++.|++++ .+|++.+|+.++++++.+++.. ...++.++.+|+.|.++++++++
T Consensus 372 k~vlItGas~giG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~~~~~~~~~~ 443 (657)
T PRK07201 372 KVVLITGASSGIGRATAIKVAEAG-------ATVFLVARNGEALDELVAEIRA-KGGTAHAYTCDLTDSAAVDHTVKDIL 443 (657)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHHH
Confidence 479999999999999999999988 7999999999998887776631 12457789999999999998877
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 444 ~~~g~id~li~~Ag~~ 459 (657)
T PRK07201 444 AEHGHVDYLVNNAGRS 459 (657)
T ss_pred HhcCCCCEEEECCCCC
Confidence 579999999964
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=98.45 E-value=6.8e-07 Score=88.87 Aligned_cols=82 Identities=20% Similarity=0.226 Sum_probs=62.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCC--HHHHHHH--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTD--PPSLHRL-- 85 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~-~~~~~~~i~~D~~d--~~sl~~~-- 85 (420)
..++|+||||+||+.++++|+++| .+|++++|+.++++++.+++... ...++..+.+|+++ .+.++++
T Consensus 54 ~~~lITGAs~GIG~alA~~La~~G-------~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~ 126 (320)
T PLN02780 54 SWALVTGPTDGIGKGFAFQLARKG-------LNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKE 126 (320)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-------CCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHH
Confidence 469999999999999999999998 78999999999998888776421 11346678899985 3444443
Q ss_pred -Hhc--cCeeEeccCCC
Q 014694 86 -CSQ--TKLLLNCVGPY 99 (420)
Q Consensus 86 -~~~--~dvVIn~aGp~ 99 (420)
+.+ .|++||+||..
T Consensus 127 ~~~~~didilVnnAG~~ 143 (320)
T PLN02780 127 TIEGLDVGVLINNVGVS 143 (320)
T ss_pred HhcCCCccEEEEecCcC
Confidence 333 45999999964
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.45 E-value=7.1e-07 Score=87.29 Aligned_cols=81 Identities=14% Similarity=0.092 Sum_probs=64.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh-HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT-RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~-kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
+.++|+||+|++|..++++|++++ .+|++.+|+.+ .++.+.+.+.. ...++.++.+|+.|.++++++++
T Consensus 47 k~iLItGasggIG~~la~~l~~~G-------~~V~l~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~i 118 (290)
T PRK06701 47 KVALITGGDSGIGRAVAVLFAKEG-------ADIAIVYLDEHEDANETKQRVEK-EGVKCLLIPGDVSDEAFCKDAVEET 118 (290)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEeCCcchHHHHHHHHHHh-cCCeEEEEEccCCCHHHHHHHHHHH
Confidence 479999999999999999999998 78999999753 34444444421 12356789999999999988876
Q ss_pred -----ccCeeEeccCCC
Q 014694 88 -----QTKLLLNCVGPY 99 (420)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (420)
+.|+|||++|..
T Consensus 119 ~~~~~~iD~lI~~Ag~~ 135 (290)
T PRK06701 119 VRELGRLDILVNNAAFQ 135 (290)
T ss_pred HHHcCCCCEEEECCccc
Confidence 469999999964
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.44 E-value=9e-07 Score=82.68 Aligned_cols=74 Identities=24% Similarity=0.264 Sum_probs=62.5
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh----
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~---- 87 (420)
.++|+||+|++|++++++|++++ .++++++|+.++++++.. .++.++.+|++|.+++++++.
T Consensus 3 ~vlvtG~sg~iG~~la~~L~~~G-------~~v~~~~r~~~~~~~~~~-------~~~~~~~~D~~~~~~v~~~~~~~~~ 68 (222)
T PRK06953 3 TVLIVGASRGIGREFVRQYRADG-------WRVIATARDAAALAALQA-------LGAEALALDVADPASVAGLAWKLDG 68 (222)
T ss_pred eEEEEcCCCchhHHHHHHHHhCC-------CEEEEEECCHHHHHHHHh-------ccceEEEecCCCHHHHHHHHHHhcC
Confidence 68999999999999999999887 789999999888765542 135689999999999988753
Q ss_pred -ccCeeEeccCCC
Q 014694 88 -QTKLLLNCVGPY 99 (420)
Q Consensus 88 -~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 69 ~~~d~vi~~ag~~ 81 (222)
T PRK06953 69 EALDAAVYVAGVY 81 (222)
T ss_pred CCCCEEEECCCcc
Confidence 379999999976
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.44 E-value=8.6e-07 Score=84.75 Aligned_cols=75 Identities=15% Similarity=0.035 Sum_probs=60.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh-HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT-RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~-kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
..++|+||+|++|+.+++.|++++ .+|++.+|+.. .++. ... .....+.+|++|.+++.+.+.+.
T Consensus 15 k~~lITGas~gIG~ala~~l~~~G-------~~Vi~~~r~~~~~~~~---~~~----~~~~~~~~D~~~~~~~~~~~~~i 80 (245)
T PRK12367 15 KRIGITGASGALGKALTKAFRAKG-------AKVIGLTHSKINNSES---NDE----SPNEWIKWECGKEESLDKQLASL 80 (245)
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCC-------CEEEEEECCchhhhhh---hcc----CCCeEEEeeCCCHHHHHHhcCCC
Confidence 479999999999999999999998 78999999863 3221 111 12256889999999999999999
Q ss_pred CeeEeccCCC
Q 014694 90 KLLLNCVGPY 99 (420)
Q Consensus 90 dvVIn~aGp~ 99 (420)
|++|||||..
T Consensus 81 DilVnnAG~~ 90 (245)
T PRK12367 81 DVLILNHGIN 90 (245)
T ss_pred CEEEECCccC
Confidence 9999999964
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.44 E-value=1.1e-06 Score=83.68 Aligned_cols=81 Identities=15% Similarity=0.080 Sum_probs=62.4
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEe-cChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAG-RNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iag-Rs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..++|+||+|++|+++++.|++.+ .+|++.+ |+.+++++..+++.. ...++..+.+|+.|.+++..++.
T Consensus 5 k~~lItGas~gIG~~ia~~l~~~G-------~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 76 (252)
T PRK12747 5 KVALVTGASRGIGRAIAKRLANDG-------ALVAIHYGNRKEEAEETVYEIQS-NGGSAFSIGANLESLHGVEALYSSL 76 (252)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCC-------CeEEEEcCCCHHHHHHHHHHHHh-cCCceEEEecccCCHHHHHHHHHHH
Confidence 479999999999999999999988 7888764 666777666655531 12345678899999887766543
Q ss_pred -----------ccCeeEeccCCC
Q 014694 88 -----------QTKLLLNCVGPY 99 (420)
Q Consensus 88 -----------~~dvVIn~aGp~ 99 (420)
..|+|||+||..
T Consensus 77 ~~~~~~~~g~~~id~lv~~Ag~~ 99 (252)
T PRK12747 77 DNELQNRTGSTKFDILINNAGIG 99 (252)
T ss_pred HHHhhhhcCCCCCCEEEECCCcC
Confidence 579999999953
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.44 E-value=6.2e-07 Score=85.04 Aligned_cols=77 Identities=18% Similarity=0.157 Sum_probs=61.7
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh-hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~-~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
.++|+||+|++|+.++++|++++ ++|++.+|+. +.++.+.+.. ..++.++.+|++|+++++++++++.
T Consensus 3 ~vlItGasggiG~~ia~~l~~~g-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~ 71 (251)
T PRK06924 3 YVIITGTSQGLGEAIANQLLEKG-------THVISISRTENKELTKLAEQY----NSNLTFHSLDLQDVHELETNFNEIL 71 (251)
T ss_pred EEEEecCCchHHHHHHHHHHhcC-------CEEEEEeCCchHHHHHHHhcc----CCceEEEEecCCCHHHHHHHHHHHH
Confidence 69999999999999999999987 7899999987 4555444332 2467789999999999999887431
Q ss_pred -----------eeEeccCCC
Q 014694 91 -----------LLLNCVGPY 99 (420)
Q Consensus 91 -----------vVIn~aGp~ 99 (420)
++||++|..
T Consensus 72 ~~~~~~~~~~~~~v~~ag~~ 91 (251)
T PRK06924 72 SSIQEDNVSSIHLINNAGMV 91 (251)
T ss_pred HhcCcccCCceEEEEcceec
Confidence 688988853
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.44 E-value=6.5e-07 Score=85.82 Aligned_cols=70 Identities=16% Similarity=0.099 Sum_probs=60.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|++|+.++++|++++ ++|++.+|+.++. .++.++.+|++|+++++++++
T Consensus 7 k~vlItGas~gIG~~ia~~l~~~G-------~~Vi~~~r~~~~~------------~~~~~~~~D~~~~~~i~~~~~~~~ 67 (258)
T PRK06398 7 KVAIVTGGSQGIGKAVVNRLKEEG-------SNVINFDIKEPSY------------NDVDYFKVDVSNKEQVIKGIDYVI 67 (258)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC-------CeEEEEeCCcccc------------CceEEEEccCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 7899999986442 246789999999999988876
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
+.|+|||++|..
T Consensus 68 ~~~~~id~li~~Ag~~ 83 (258)
T PRK06398 68 SKYGRIDILVNNAGIE 83 (258)
T ss_pred HHcCCCCEEEECCCCC
Confidence 579999999863
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.44 E-value=8.8e-07 Score=93.46 Aligned_cols=79 Identities=20% Similarity=0.131 Sum_probs=68.2
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc-
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~- 88 (420)
...++|+||+|+||+.+++.|++++ .+|++.+|+.++++++.++++ .+...+.+|++|+++++++++.
T Consensus 269 ~k~~lItGas~gIG~~~a~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~ 337 (520)
T PRK06484 269 PRVVAITGGARGIGRAVADRFAAAG-------DRLLIIDRDAEGAKKLAEALG----DEHLSVQADITDEAAVESAFAQI 337 (520)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhC----CceeEEEccCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 799999999999988877663 3456789999999999988763
Q ss_pred ------cCeeEeccCCC
Q 014694 89 ------TKLLLNCVGPY 99 (420)
Q Consensus 89 ------~dvVIn~aGp~ 99 (420)
.|+||||||..
T Consensus 338 ~~~~g~id~li~nAg~~ 354 (520)
T PRK06484 338 QARWGRLDVLVNNAGIA 354 (520)
T ss_pred HHHcCCCCEEEECCCCc
Confidence 69999999964
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.44 E-value=1.4e-06 Score=83.59 Aligned_cols=86 Identities=17% Similarity=0.117 Sum_probs=64.4
Q ss_pred CCCCCCCCCcceEEEEcCC--cHHHHHHHHHHHHhCCCCCCCcceEEEEecChhH---HHHHHHHhCCCCCCCccEEEEe
Q 014694 1 MQAQSQIPELFDVIILGAS--GFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR---VKQALQWASPSHSLSIPILTAD 75 (420)
Q Consensus 1 m~~~~~~~~~~~IvV~GAT--G~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~k---l~~~~~~l~~~~~~~~~~i~~D 75 (420)
|+....+. ...++|+||+ +.||+.++++|++++ .+|++.+|+.+. ++++.+++. ...++.+|
T Consensus 2 ~~~~~~~~-~k~~lItGas~g~GIG~a~a~~la~~G-------~~v~l~~r~~~~~~~~~~~~~~~~-----~~~~~~~D 68 (258)
T PRK07533 2 MQPLLPLA-GKRGLVVGIANEQSIAWGCARAFRALG-------AELAVTYLNDKARPYVEPLAEELD-----APIFLPLD 68 (258)
T ss_pred CCcccccC-CCEEEEECCCCCCcHHHHHHHHHHHcC-------CEEEEEeCChhhHHHHHHHHHhhc-----cceEEecC
Confidence 44333333 3479999998 489999999999988 789999998643 344444332 34578899
Q ss_pred CCCHHHHHHHHh-------ccCeeEeccCCC
Q 014694 76 TTDPPSLHRLCS-------QTKLLLNCVGPY 99 (420)
Q Consensus 76 ~~d~~sl~~~~~-------~~dvVIn~aGp~ 99 (420)
++|+++++++++ ..|++|||||..
T Consensus 69 ~~~~~~v~~~~~~~~~~~g~ld~lv~nAg~~ 99 (258)
T PRK07533 69 VREPGQLEAVFARIAEEWGRLDFLLHSIAFA 99 (258)
T ss_pred cCCHHHHHHHHHHHHHHcCCCCEEEEcCccC
Confidence 999999988765 469999999964
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.44 E-value=7.9e-07 Score=87.28 Aligned_cols=81 Identities=17% Similarity=0.137 Sum_probs=62.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh--HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT--RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~--kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
..++|+||+|++|+.++++|++++ .+|++..|+.+ .++++.+.+.. ...++.++.+|++|+++++++++
T Consensus 56 k~vlITGas~gIG~~~a~~l~~~G-------~~V~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~ 127 (300)
T PRK06128 56 RKALITGADSGIGRATAIAFAREG-------ADIALNYLPEEEQDAAEVVQLIQA-EGRKAVALPGDLKDEAFCRQLVER 127 (300)
T ss_pred CEEEEecCCCcHHHHHHHHHHHcC-------CEEEEEeCCcchHHHHHHHHHHHH-cCCeEEEEecCCCCHHHHHHHHHH
Confidence 479999999999999999999998 78888777543 33444443321 12356788999999999888876
Q ss_pred ------ccCeeEeccCCC
Q 014694 88 ------QTKLLLNCVGPY 99 (420)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (420)
+.|+|||++|..
T Consensus 128 ~~~~~g~iD~lV~nAg~~ 145 (300)
T PRK06128 128 AVKELGGLDILVNIAGKQ 145 (300)
T ss_pred HHHHhCCCCEEEECCccc
Confidence 479999999953
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.43 E-value=9.3e-07 Score=85.72 Aligned_cols=78 Identities=21% Similarity=0.251 Sum_probs=63.9
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh----
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~---- 87 (420)
.++|+|| |+||+++++.|+ ++ .+|++++|+.++++++.+++.. ...++.++.+|++|++++.++++
T Consensus 4 ~~lItGa-~gIG~~la~~l~-~G-------~~Vv~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dv~d~~~i~~~~~~~~~ 73 (275)
T PRK06940 4 VVVVIGA-GGIGQAIARRVG-AG-------KKVLLADYNEENLEAAAKTLRE-AGFDVSTQEVDVSSRESVKALAATAQT 73 (275)
T ss_pred EEEEECC-ChHHHHHHHHHh-CC-------CEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEEeecCCHHHHHHHHHHHHh
Confidence 5899998 689999999995 56 7899999999888777766642 12356788999999999998876
Q ss_pred --ccCeeEeccCCC
Q 014694 88 --QTKLLLNCVGPY 99 (420)
Q Consensus 88 --~~dvVIn~aGp~ 99 (420)
..|+|||+||..
T Consensus 74 ~g~id~li~nAG~~ 87 (275)
T PRK06940 74 LGPVTGLVHTAGVS 87 (275)
T ss_pred cCCCCEEEECCCcC
Confidence 479999999964
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.43 E-value=6.7e-07 Score=84.56 Aligned_cols=77 Identities=17% Similarity=0.126 Sum_probs=60.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
++++|+||||++|+.++++|++++ +++++++|+.++. +.+.. ..++.++.+|+.|.+++++++.
T Consensus 2 ~~vlItGasggiG~~ia~~l~~~G-------~~v~~~~r~~~~~--~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~ 68 (243)
T PRK07023 2 VRAIVTGHSRGLGAALAEQLLQPG-------IAVLGVARSRHPS--LAAAA----GERLAEVELDLSDAAAAAAWLAGDL 68 (243)
T ss_pred ceEEEecCCcchHHHHHHHHHhCC-------CEEEEEecCcchh--hhhcc----CCeEEEEEeccCCHHHHHHHHHHHH
Confidence 479999999999999999999987 7899999987642 11211 2357789999999999988543
Q ss_pred --------ccCeeEeccCCCC
Q 014694 88 --------QTKLLLNCVGPYR 100 (420)
Q Consensus 88 --------~~dvVIn~aGp~~ 100 (420)
..|++||++|...
T Consensus 69 ~~~~~~~~~~~~~v~~ag~~~ 89 (243)
T PRK07023 69 LAAFVDGASRVLLINNAGTVE 89 (243)
T ss_pred HHHhccCCCceEEEEcCcccC
Confidence 3579999999654
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.42 E-value=9.1e-07 Score=84.46 Aligned_cols=72 Identities=14% Similarity=0.164 Sum_probs=60.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..|+|+||+|++|+.++++|++++ ++|++++|+.++. . ..++.++.+|+.|+++++++++
T Consensus 10 k~vlItGas~gIG~~ia~~l~~~G-------~~v~~~~r~~~~~------~----~~~~~~~~~D~~~~~~~~~~~~~~~ 72 (260)
T PRK06523 10 KRALVTGGTKGIGAATVARLLEAG-------ARVVTTARSRPDD------L----PEGVEFVAADLTTAEGCAAVARAVL 72 (260)
T ss_pred CEEEEECCCCchhHHHHHHHHHCC-------CEEEEEeCChhhh------c----CCceeEEecCCCCHHHHHHHHHHHH
Confidence 579999999999999999999988 7899999986542 1 2356789999999998887664
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 73 ~~~~~id~vi~~ag~~ 88 (260)
T PRK06523 73 ERLGGVDILVHVLGGS 88 (260)
T ss_pred HHcCCCCEEEECCccc
Confidence 469999999953
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.42 E-value=9.5e-07 Score=84.52 Aligned_cols=81 Identities=15% Similarity=0.069 Sum_probs=63.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC-hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs-~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..++|+||+|++|+.+++.|++++ .++++..|+ .++++.+.+++.. ...++.++.+|++|.+++.++++
T Consensus 8 k~~lItGa~~gIG~~ia~~l~~~G-------~~vvi~~~~~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~i~~~~~~~ 79 (261)
T PRK08936 8 KVVVITGGSTGLGRAMAVRFGKEK-------AKVVINYRSDEEEANDVAEEIKK-AGGEAIAVKGDVTVESDVVNLIQTA 79 (261)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCC-------CEEEEEeCCCHHHHHHHHHHHHH-cCCeEEEEEecCCCHHHHHHHHHHH
Confidence 479999999999999999999988 788888885 4455555555431 12356788999999999888776
Q ss_pred -----ccCeeEeccCCC
Q 014694 88 -----QTKLLLNCVGPY 99 (420)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 80 ~~~~g~id~lv~~ag~~ 96 (261)
T PRK08936 80 VKEFGTLDVMINNAGIE 96 (261)
T ss_pred HHHcCCCCEEEECCCCC
Confidence 469999999964
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.42 E-value=1e-06 Score=86.85 Aligned_cols=83 Identities=12% Similarity=0.105 Sum_probs=66.3
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC-hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs-~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
...++|+||+|+||+.++++|++++ .+|++.+|+ .++++++.+++.. ...++.++.+|+.|.+++.++++
T Consensus 12 ~k~~lVTGas~gIG~~ia~~L~~~G-------a~Vv~~~~~~~~~~~~~~~~i~~-~g~~~~~~~~Dv~d~~~~~~~~~~ 83 (306)
T PRK07792 12 GKVAVVTGAAAGLGRAEALGLARLG-------ATVVVNDVASALDASDVLDEIRA-AGAKAVAVAGDISQRATADELVAT 83 (306)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC-------CEEEEecCCchhHHHHHHHHHHh-cCCeEEEEeCCCCCHHHHHHHHHH
Confidence 3479999999999999999999998 788888875 4556666665531 23457789999999999998876
Q ss_pred -----ccCeeEeccCCCC
Q 014694 88 -----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (420)
+.|+|||++|...
T Consensus 84 ~~~~g~iD~li~nAG~~~ 101 (306)
T PRK07792 84 AVGLGGLDIVVNNAGITR 101 (306)
T ss_pred HHHhCCCCEEEECCCCCC
Confidence 4799999999653
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.42 E-value=1.5e-06 Score=82.96 Aligned_cols=75 Identities=13% Similarity=0.156 Sum_probs=60.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh-HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT-RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~-kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..++|+||+|++|+.++++|++++ .+|++..|+.+ .++++.+ .++.++.+|++|++++.++++
T Consensus 8 k~~lItGas~gIG~~~a~~l~~~G-------~~v~~~~~~~~~~~~~l~~-------~~~~~~~~Dl~~~~~~~~~~~~~ 73 (255)
T PRK06463 8 KVALITGGTRGIGRAIAEAFLREG-------AKVAVLYNSAENEAKELRE-------KGVFTIKCDVGNRDQVKKSKEVV 73 (255)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCC-------CEEEEEeCCcHHHHHHHHh-------CCCeEEEecCCCHHHHHHHHHHH
Confidence 579999999999999999999988 78887776543 3333321 246789999999999999876
Q ss_pred -----ccCeeEeccCCC
Q 014694 88 -----QTKLLLNCVGPY 99 (420)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (420)
+.|+||||+|..
T Consensus 74 ~~~~~~id~li~~ag~~ 90 (255)
T PRK06463 74 EKEFGRVDVLVNNAGIM 90 (255)
T ss_pred HHHcCCCCEEEECCCcC
Confidence 469999999864
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.42 E-value=1.3e-06 Score=83.44 Aligned_cols=81 Identities=16% Similarity=0.186 Sum_probs=61.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC----hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN----PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs----~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
..++|+||+|++|+.++++|++++ +++++..++ .++++++.+++.. ...++.++.+|++|++++++++
T Consensus 9 k~vlItGa~~gIG~~~a~~l~~~G-------~~vv~i~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~ 80 (257)
T PRK12744 9 KVVLIAGGAKNLGGLIARDLAAQG-------AKAVAIHYNSAASKADAEETVAAVKA-AGAKAVAFQADLTTAAAVEKLF 80 (257)
T ss_pred cEEEEECCCchHHHHHHHHHHHCC-------CcEEEEecCCccchHHHHHHHHHHHH-hCCcEEEEecCcCCHHHHHHHH
Confidence 479999999999999999999987 675555543 3445555554421 1235778899999999999887
Q ss_pred h-------ccCeeEeccCCC
Q 014694 87 S-------QTKLLLNCVGPY 99 (420)
Q Consensus 87 ~-------~~dvVIn~aGp~ 99 (420)
+ +.|+|||++|..
T Consensus 81 ~~~~~~~~~id~li~~ag~~ 100 (257)
T PRK12744 81 DDAKAAFGRPDIAINTVGKV 100 (257)
T ss_pred HHHHHhhCCCCEEEECCccc
Confidence 6 479999999963
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.41 E-value=1.1e-06 Score=83.43 Aligned_cols=74 Identities=26% Similarity=0.209 Sum_probs=61.0
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh----
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~---- 87 (420)
.|+|+||+|++|+.++++|++++ .+|++.+|+.++++.+.+ .++..+.+|+.|.+++.++++
T Consensus 4 ~vlVtGasg~IG~~la~~l~~~g-------~~v~~~~r~~~~~~~~~~-------~~~~~~~~D~~~~~~~~~~~~~i~~ 69 (256)
T PRK08017 4 SVLITGCSSGIGLEAALELKRRG-------YRVLAACRKPDDVARMNS-------LGFTGILLDLDDPESVERAADEVIA 69 (256)
T ss_pred EEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHhHHHHh-------CCCeEEEeecCCHHHHHHHHHHHHH
Confidence 69999999999999999999987 789999999988765432 146788999999988777654
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
..|.+||++|..
T Consensus 70 ~~~~~~~~ii~~ag~~ 85 (256)
T PRK08017 70 LTDNRLYGLFNNAGFG 85 (256)
T ss_pred hcCCCCeEEEECCCCC
Confidence 357899999853
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.40 E-value=2.7e-06 Score=93.04 Aligned_cols=81 Identities=15% Similarity=0.089 Sum_probs=69.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|+||+.+++.|++++ .+|++++|+.++++.+.++++. ..++.++.+|++|++++.++++
T Consensus 423 k~vLVTGasggIG~~la~~L~~~G-------a~Vvl~~r~~~~~~~~~~~l~~--~~~v~~v~~Dvtd~~~v~~~~~~~~ 493 (681)
T PRK08324 423 KVALVTGAAGGIGKATAKRLAAEG-------ACVVLADLDEEAAEAAAAELGG--PDRALGVACDVTDEAAVQAAFEEAA 493 (681)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCc-------CEEEEEeCCHHHHHHHHHHHhc--cCcEEEEEecCCCHHHHHHHHHHHH
Confidence 479999999999999999999987 7899999999998887777642 1367789999999999988876
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
+.|+|||++|...
T Consensus 494 ~~~g~iDvvI~~AG~~~ 510 (681)
T PRK08324 494 LAFGGVDIVVSNAGIAI 510 (681)
T ss_pred HHcCCCCEEEECCCCCC
Confidence 5799999999643
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.40 E-value=8.6e-07 Score=84.99 Aligned_cols=72 Identities=17% Similarity=0.136 Sum_probs=61.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|++|+.++++|++++ .+|++.+|+.++++ ..++.++.+|++|+++++++++
T Consensus 10 k~vlItG~s~gIG~~la~~l~~~G-------~~v~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~~~ 72 (266)
T PRK06171 10 KIIIVTGGSSGIGLAIVKELLANG-------ANVVNADIHGGDGQ----------HENYQFVPTDVSSAEEVNHTVAEII 72 (266)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCC-------CEEEEEeCCccccc----------cCceEEEEccCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 79999999876642 2356788999999999998876
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 73 ~~~g~id~li~~Ag~~ 88 (266)
T PRK06171 73 EKFGRIDGLVNNAGIN 88 (266)
T ss_pred HHcCCCCEEEECCccc
Confidence 369999999964
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=98.40 E-value=6.1e-07 Score=87.58 Aligned_cols=82 Identities=15% Similarity=0.156 Sum_probs=62.8
Q ss_pred EEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--ccCe
Q 014694 14 IILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--QTKL 91 (420)
Q Consensus 14 vV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--~~dv 91 (420)
+|+|||||+|++++++|++.+ ..+.++.+. ..+|+.|.++++++++ ++|+
T Consensus 1 lItGa~GfiG~~l~~~L~~~g-------~~v~~~~~~---------------------~~~Dl~~~~~l~~~~~~~~~d~ 52 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALG-------FTNLVLRTH---------------------KELDLTRQADVEAFFAKEKPTY 52 (306)
T ss_pred CcccCCCcccHHHHHHHHhCC-------CcEEEeecc---------------------ccCCCCCHHHHHHHHhccCCCE
Confidence 589999999999999999987 455544221 1368999999999887 4699
Q ss_pred eEeccCCCCC------C-----------cHHHHHHHHHcCC-cEEecCCc
Q 014694 92 LLNCVGPYRL------H-----------GDPVAAACVHSGC-DYLDISGE 123 (420)
Q Consensus 92 VIn~aGp~~~------~-----------~~~vv~Ac~~~g~-~yvdisge 123 (420)
|||||++... . ..+++++|.++++ ++|.+|..
T Consensus 53 Vih~A~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~ 102 (306)
T PLN02725 53 VILAAAKVGGIHANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSS 102 (306)
T ss_pred EEEeeeeecccchhhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCce
Confidence 9999986421 1 2678999999987 67777653
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.40 E-value=1.7e-06 Score=83.01 Aligned_cols=78 Identities=17% Similarity=0.174 Sum_probs=63.9
Q ss_pred ceEEEEcC--CcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh--hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 014694 11 FDVIILGA--SGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 11 ~~IvV~GA--TG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~--~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
..++|+|| ++.||+.+++.|++++ .+|++.+|+. +.++++.+++. .++.++.+|++|++++++++
T Consensus 8 k~~lItGa~~s~GIG~a~a~~la~~G-------~~v~l~~r~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~i~~~~ 76 (256)
T PRK07889 8 KRILVTGVITDSSIAFHVARVAQEQG-------AEVVLTGFGRALRLTERIAKRLP----EPAPVLELDVTNEEHLASLA 76 (256)
T ss_pred CEEEEeCCCCcchHHHHHHHHHHHCC-------CEEEEecCccchhHHHHHHHhcC----CCCcEEeCCCCCHHHHHHHH
Confidence 47999999 8999999999999988 7899998864 44566655553 25678999999999998886
Q ss_pred h-------ccCeeEeccCCC
Q 014694 87 S-------QTKLLLNCVGPY 99 (420)
Q Consensus 87 ~-------~~dvVIn~aGp~ 99 (420)
+ +.|++||++|..
T Consensus 77 ~~~~~~~g~iD~li~nAG~~ 96 (256)
T PRK07889 77 DRVREHVDGLDGVVHSIGFA 96 (256)
T ss_pred HHHHHHcCCCcEEEEccccc
Confidence 5 479999999964
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.40 E-value=1.6e-06 Score=81.67 Aligned_cols=80 Identities=16% Similarity=0.075 Sum_probs=62.6
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh-HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc--
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT-RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~-kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~-- 88 (420)
.++|+||+|++|+.+++.|++++ .+|++.+|+.. ..++..+.+.. ...++.++.+|+.|.+++.+++++
T Consensus 4 ~vlItG~s~~iG~~la~~l~~~g-------~~vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~ 75 (245)
T PRK12824 4 IALVTGAKRGIGSAIARELLNDG-------YRVIATYFSGNDCAKDWFEEYGF-TEDQVRLKELDVTDTEECAEALAEIE 75 (245)
T ss_pred EEEEeCCCchHHHHHHHHHHHcC-------CEEEEEeCCcHHHHHHHHHHhhc-cCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 69999999999999999999987 78999999853 33333333321 224578899999999998887763
Q ss_pred -----cCeeEeccCCC
Q 014694 89 -----TKLLLNCVGPY 99 (420)
Q Consensus 89 -----~dvVIn~aGp~ 99 (420)
.|+|||++|..
T Consensus 76 ~~~~~id~vi~~ag~~ 91 (245)
T PRK12824 76 EEEGPVDILVNNAGIT 91 (245)
T ss_pred HHcCCCCEEEECCCCC
Confidence 79999999853
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.39 E-value=1.7e-06 Score=83.47 Aligned_cols=80 Identities=13% Similarity=0.137 Sum_probs=62.0
Q ss_pred ceEEEEcCCc--HHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 11 FDVIILGASG--FTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 11 ~~IvV~GATG--~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
..++|+||++ .||+.+++.|++++ .+|++.+|+ +++++.++++.. .......+.+|++|+++++++++
T Consensus 7 k~~lITGas~~~GIG~aia~~la~~G-------~~vil~~r~-~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~ 77 (262)
T PRK07984 7 KRILVTGVASKLSIAYGIAQAMHREG-------AELAFTYQN-DKLKGRVEEFAA-QLGSDIVLPCDVAEDASIDAMFAE 77 (262)
T ss_pred CEEEEeCCCCCccHHHHHHHHHHHCC-------CEEEEEecc-hhHHHHHHHHHh-ccCCceEeecCCCCHHHHHHHHHH
Confidence 4799999985 89999999999998 789998997 344444444431 11245678899999999999875
Q ss_pred ------ccCeeEeccCCC
Q 014694 88 ------QTKLLLNCVGPY 99 (420)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (420)
+.|++||++|..
T Consensus 78 ~~~~~g~iD~linnAg~~ 95 (262)
T PRK07984 78 LGKVWPKFDGFVHSIGFA 95 (262)
T ss_pred HHhhcCCCCEEEECCccC
Confidence 369999999954
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=98.39 E-value=1.7e-06 Score=94.43 Aligned_cols=83 Identities=16% Similarity=0.104 Sum_probs=68.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~-~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..++|+||+|+||+.++++|++++ .+|++++|+.++++.+.+++... ....+..+.+|++|++++.++++
T Consensus 415 kvvLVTGasggIG~aiA~~La~~G-------a~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i 487 (676)
T TIGR02632 415 RVAFVTGGAGGIGRETARRLAAEG-------AHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADV 487 (676)
T ss_pred CEEEEeCCCcHHHHHHHHHHHhCC-------CEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHH
Confidence 479999999999999999999988 79999999998887766655310 11245678999999999998887
Q ss_pred -----ccCeeEeccCCCC
Q 014694 88 -----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 488 ~~~~g~iDilV~nAG~~~ 505 (676)
T TIGR02632 488 ALAYGGVDIVVNNAGIAT 505 (676)
T ss_pred HHhcCCCcEEEECCCCCC
Confidence 5799999999643
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.38 E-value=1.5e-06 Score=91.67 Aligned_cols=78 Identities=19% Similarity=0.232 Sum_probs=67.8
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
...++|+||+++||+.+++.|++++ .+|++.+|+.++++++.++++ .++..+.+|++|++++.++++
T Consensus 5 ~k~~lITGas~gIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~ 73 (520)
T PRK06484 5 SRVVLVTGAAGGIGRAACQRFARAG-------DQVVVADRNVERARERADSLG----PDHHALAMDVSDEAQIREGFEQL 73 (520)
T ss_pred CeEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhC----CceeEEEeccCCHHHHHHHHHHH
Confidence 3479999999999999999999998 789999999999888877663 356679999999999988875
Q ss_pred -----ccCeeEeccCC
Q 014694 88 -----QTKLLLNCVGP 98 (420)
Q Consensus 88 -----~~dvVIn~aGp 98 (420)
..|+|||++|.
T Consensus 74 ~~~~g~iD~li~nag~ 89 (520)
T PRK06484 74 HREFGRIDVLVNNAGV 89 (520)
T ss_pred HHHhCCCCEEEECCCc
Confidence 47999999986
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.38 E-value=1.4e-06 Score=86.01 Aligned_cols=79 Identities=15% Similarity=0.199 Sum_probs=63.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh----------hHHHHHHHHhCCCCCCCccEEEEeCCCHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP----------TRVKQALQWASPSHSLSIPILTADTTDPP 80 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~----------~kl~~~~~~l~~~~~~~~~~i~~D~~d~~ 80 (420)
..++|+||++.||+.+++.|++.+ .+|++++|+. ++++++.+.+.. ...++.++.+|+.|++
T Consensus 9 k~~lITGgs~GIG~aia~~la~~G-------~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~Dv~~~~ 80 (305)
T PRK08303 9 KVALVAGATRGAGRGIAVELGAAG-------ATVYVTGRSTRARRSEYDRPETIEETAELVTA-AGGRGIAVQVDHLVPE 80 (305)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEecccccccccccccchHHHHHHHHHh-cCCceEEEEcCCCCHH
Confidence 479999999999999999999988 7899999983 455555554431 1234567899999999
Q ss_pred HHHHHHh-------ccCeeEecc-C
Q 014694 81 SLHRLCS-------QTKLLLNCV-G 97 (420)
Q Consensus 81 sl~~~~~-------~~dvVIn~a-G 97 (420)
+++++++ ..|++||++ |
T Consensus 81 ~v~~~~~~~~~~~g~iDilVnnA~g 105 (305)
T PRK08303 81 QVRALVERIDREQGRLDILVNDIWG 105 (305)
T ss_pred HHHHHHHHHHHHcCCccEEEECCcc
Confidence 9998875 469999999 6
|
|
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=98.38 E-value=1.2e-06 Score=83.74 Aligned_cols=100 Identities=16% Similarity=0.247 Sum_probs=75.3
Q ss_pred CCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHH-HHhCCCCCCCccEEEEeCCCHHHHHHH
Q 014694 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQAL-QWASPSHSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 7 ~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~-~~l~~~~~~~~~~i~~D~~d~~sl~~~ 85 (420)
.....+|+|+||.||||+|+|+.|..++ ..|++++.--.+.+..+ ..+. ...++++..|+.. ++
T Consensus 24 p~~~lrI~itGgaGFIgSHLvdkLm~eg-------h~VIa~Dn~ftg~k~n~~~~~~---~~~fel~~hdv~~-----pl 88 (350)
T KOG1429|consen 24 PSQNLRILITGGAGFIGSHLVDKLMTEG-------HEVIALDNYFTGRKENLEHWIG---HPNFELIRHDVVE-----PL 88 (350)
T ss_pred CCCCcEEEEecCcchHHHHHHHHHHhcC-------CeEEEEecccccchhhcchhcc---CcceeEEEeechh-----HH
Confidence 3455799999999999999999999998 68888886433332222 2332 4567888888755 48
Q ss_pred HhccCeeEeccCCCCCC----------------cHHHHHHHHHcCCcEEecC
Q 014694 86 CSQTKLLLNCVGPYRLH----------------GDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 86 ~~~~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~~yvdis 121 (420)
+..+|-|+|.|.|.... ..+++..|++.+.+++..|
T Consensus 89 ~~evD~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv~aR~l~aS 140 (350)
T KOG1429|consen 89 LKEVDQIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVGARFLLAS 140 (350)
T ss_pred HHHhhhhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHhCceEEEee
Confidence 88899999999876432 2788999999998877765
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.37 E-value=2.1e-06 Score=81.21 Aligned_cols=80 Identities=14% Similarity=0.132 Sum_probs=60.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEec-ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagR-s~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..|+|+||+|++|++++++|++++ +++++..| +.+.+......+.. ...++.++.+|++|++++.++++
T Consensus 7 ~~vlitGasg~iG~~l~~~l~~~g-------~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 78 (252)
T PRK06077 7 KVVVVTGSGRGIGRAIAVRLAKEG-------SLVVVNAKKRAEEMNETLKMVKE-NGGEGIGVLADVSTREGCETLAKAT 78 (252)
T ss_pred cEEEEeCCCChHHHHHHHHHHHCC-------CEEEEEeCCChHHHHHHHHHHHH-cCCeeEEEEeccCCHHHHHHHHHHH
Confidence 479999999999999999999987 67777665 34444444333321 12345678899999999988876
Q ss_pred -----ccCeeEeccCC
Q 014694 88 -----QTKLLLNCVGP 98 (420)
Q Consensus 88 -----~~dvVIn~aGp 98 (420)
..|+|||++|.
T Consensus 79 ~~~~~~~d~vi~~ag~ 94 (252)
T PRK06077 79 IDRYGVADILVNNAGL 94 (252)
T ss_pred HHHcCCCCEEEECCCC
Confidence 46999999995
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=98.37 E-value=1.1e-06 Score=82.66 Aligned_cols=80 Identities=14% Similarity=0.078 Sum_probs=63.2
Q ss_pred EEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC-hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc---
Q 014694 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ--- 88 (420)
Q Consensus 13 IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs-~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~--- 88 (420)
|+|+||+|++|+.++++|++++ .++++.+|+ .++++.+.+++.. ...++.++.+|++|.+++.++++.
T Consensus 1 vlItGas~giG~~~a~~l~~~G-------~~v~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 72 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADG-------FEICVHYHSGRSDAESVVSAIQA-QGGNARLLQFDVADRVACRTLLEADIA 72 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCC-------CEEEEEeCCCHHHHHHHHHHHHH-cCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 6899999999999999999988 788888764 5566666655531 134678899999999999887763
Q ss_pred ----cCeeEeccCCCC
Q 014694 89 ----TKLLLNCVGPYR 100 (420)
Q Consensus 89 ----~dvVIn~aGp~~ 100 (420)
.|++||++|...
T Consensus 73 ~~~~i~~li~~ag~~~ 88 (239)
T TIGR01831 73 EHGAYYGVVLNAGITR 88 (239)
T ss_pred HcCCCCEEEECCCCCC
Confidence 589999999643
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.35 E-value=2.6e-06 Score=82.69 Aligned_cols=77 Identities=16% Similarity=0.170 Sum_probs=61.3
Q ss_pred ceEEEEcCC--cHHHHHHHHHHHHhCCCCCCCcceEEEEecCh---hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 014694 11 FDVIILGAS--GFTGKYVVREALKLFNFPSSPIKSLALAGRNP---TRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 11 ~~IvV~GAT--G~~G~~va~~L~~~~~~~~~~~~~v~iagRs~---~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~ 85 (420)
..++|+||+ +.||+.+++.|++++ .+|++.+|+. ++++++.++++ .. .++.+|++|.++++++
T Consensus 6 k~~lItGas~~~GIG~aiA~~la~~G-------~~Vil~~r~~~~~~~~~~~~~~~~----~~-~~~~~Dv~d~~~v~~~ 73 (274)
T PRK08415 6 KKGLIVGVANNKSIAYGIAKACFEQG-------AELAFTYLNEALKKRVEPIAQELG----SD-YVYELDVSKPEHFKSL 73 (274)
T ss_pred cEEEEECCCCCCCHHHHHHHHHHHCC-------CEEEEEecCHHHHHHHHHHHHhcC----Cc-eEEEecCCCHHHHHHH
Confidence 479999997 789999999999998 7899999985 34444444442 22 5788999999999988
Q ss_pred Hh-------ccCeeEeccCCC
Q 014694 86 CS-------QTKLLLNCVGPY 99 (420)
Q Consensus 86 ~~-------~~dvVIn~aGp~ 99 (420)
++ ..|++||+||..
T Consensus 74 ~~~i~~~~g~iDilVnnAG~~ 94 (274)
T PRK08415 74 AESLKKDLGKIDFIVHSVAFA 94 (274)
T ss_pred HHHHHHHcCCCCEEEECCccC
Confidence 75 469999999964
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.35 E-value=3.5e-06 Score=81.43 Aligned_cols=96 Identities=19% Similarity=0.123 Sum_probs=78.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
-.|+||||++.+|+.++.++++++ .++++.+.|.+..++..+++.. ..++...+||++|.+++.++++
T Consensus 39 ~~vLITGgg~GlGr~ialefa~rg-------~~~vl~Din~~~~~etv~~~~~--~g~~~~y~cdis~~eei~~~a~~Vk 109 (300)
T KOG1201|consen 39 EIVLITGGGSGLGRLIALEFAKRG-------AKLVLWDINKQGNEETVKEIRK--IGEAKAYTCDISDREEIYRLAKKVK 109 (300)
T ss_pred CEEEEeCCCchHHHHHHHHHHHhC-------CeEEEEeccccchHHHHHHHHh--cCceeEEEecCCCHHHHHHHHHHHH
Confidence 369999999999999999999998 6899999999888887777752 1367889999999999988876
Q ss_pred ----ccCeeEeccCCCCC-----CcHHHHHHHHHcCC
Q 014694 88 ----QTKLLLNCVGPYRL-----HGDPVAAACVHSGC 115 (420)
Q Consensus 88 ----~~dvVIn~aGp~~~-----~~~~vv~Ac~~~g~ 115 (420)
..+++||+||.... ...+.++-|.+-++
T Consensus 110 ~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~ 146 (300)
T KOG1201|consen 110 KEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNT 146 (300)
T ss_pred HhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhh
Confidence 47999999996432 34677777776544
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.34 E-value=2.4e-06 Score=82.04 Aligned_cols=79 Identities=10% Similarity=0.079 Sum_probs=63.9
Q ss_pred ceEEEEcCC--cHHHHHHHHHHHHhCCCCCCCcceEEEEecC---hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 014694 11 FDVIILGAS--GFTGKYVVREALKLFNFPSSPIKSLALAGRN---PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 11 ~~IvV~GAT--G~~G~~va~~L~~~~~~~~~~~~~v~iagRs---~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~ 85 (420)
..++|+||+ +.||+.+++.|++++ .+|++++|+ .++++++.+++. ..++.++.+|++|+++++++
T Consensus 8 k~~lItGa~~s~GIG~aia~~la~~G-------~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~ 77 (257)
T PRK08594 8 KTYVVMGVANKRSIAWGIARSLHNAG-------AKLVFTYAGERLEKEVRELADTLE---GQESLLLPCDVTSDEEITAC 77 (257)
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHCC-------CEEEEecCcccchHHHHHHHHHcC---CCceEEEecCCCCHHHHHHH
Confidence 479999997 899999999999998 789888765 356666666552 24567889999999999888
Q ss_pred Hh-------ccCeeEeccCCC
Q 014694 86 CS-------QTKLLLNCVGPY 99 (420)
Q Consensus 86 ~~-------~~dvVIn~aGp~ 99 (420)
++ ..|++|||+|..
T Consensus 78 ~~~~~~~~g~ld~lv~nag~~ 98 (257)
T PRK08594 78 FETIKEEVGVIHGVAHCIAFA 98 (257)
T ss_pred HHHHHHhCCCccEEEECcccC
Confidence 75 369999999854
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=98.34 E-value=2e-06 Score=84.78 Aligned_cols=79 Identities=19% Similarity=0.167 Sum_probs=65.6
Q ss_pred EEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh------
Q 014694 14 IILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS------ 87 (420)
Q Consensus 14 vV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~------ 87 (420)
||+||++.||..+++.|++++. .+|++.+|+.++++++.+++.. ...++.++.+|+.|.++++++++
T Consensus 1 lITGas~GIG~aia~~l~~~G~------~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 73 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGK------WHVVMACRDFLKAERAAKSAGM-PKDSYTVMHLDLASLDSVRQFVDNFRRSG 73 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCC------CEEEEEeCCHHHHHHHHHHhcC-CCCeEEEEEecCCCHHHHHHHHHHHHhcC
Confidence 6899999999999999999872 6889999999988888777642 12356778999999999988875
Q ss_pred -ccCeeEeccCCC
Q 014694 88 -QTKLLLNCVGPY 99 (420)
Q Consensus 88 -~~dvVIn~aGp~ 99 (420)
..|+|||+||..
T Consensus 74 ~~iD~lInnAG~~ 86 (308)
T PLN00015 74 RPLDVLVCNAAVY 86 (308)
T ss_pred CCCCEEEECCCcC
Confidence 469999999964
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.34 E-value=2.3e-06 Score=81.67 Aligned_cols=79 Identities=13% Similarity=0.056 Sum_probs=60.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|+||+.++++|++++ .+|++.+|+.. ++..+++.. ...++..+.+|++|.++++++++
T Consensus 11 k~~lItG~~~gIG~a~a~~l~~~G-------~~vv~~~~~~~--~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~ 80 (253)
T PRK08993 11 KVAVVTGCDTGLGQGMALGLAEAG-------CDIVGINIVEP--TETIEQVTA-LGRRFLSLTADLRKIDGIPALLERAV 80 (253)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC-------CEEEEecCcch--HHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 479999999999999999999988 78887777532 122222211 12356778999999999998876
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
..|+||||+|..
T Consensus 81 ~~~~~~D~li~~Ag~~ 96 (253)
T PRK08993 81 AEFGHIDILVNNAGLI 96 (253)
T ss_pred HHhCCCCEEEECCCCC
Confidence 479999999964
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.33 E-value=3e-06 Score=82.09 Aligned_cols=77 Identities=16% Similarity=0.133 Sum_probs=61.1
Q ss_pred ceEEEEcCC--cHHHHHHHHHHHHhCCCCCCCcceEEEEecCh---hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 014694 11 FDVIILGAS--GFTGKYVVREALKLFNFPSSPIKSLALAGRNP---TRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 11 ~~IvV~GAT--G~~G~~va~~L~~~~~~~~~~~~~v~iagRs~---~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~ 85 (420)
..++|+||+ +.||+.+++.|++++ .+|++.+|+. ++++++.++++ ....+.+|++|+++++++
T Consensus 11 k~~lItGas~~~GIG~aia~~la~~G-------~~V~l~~r~~~~~~~~~~l~~~~~-----~~~~~~~Dl~~~~~v~~~ 78 (272)
T PRK08159 11 KRGLILGVANNRSIAWGIAKACRAAG-------AELAFTYQGDALKKRVEPLAAELG-----AFVAGHCDVTDEASIDAV 78 (272)
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHCC-------CEEEEEcCchHHHHHHHHHHHhcC-----CceEEecCCCCHHHHHHH
Confidence 479999997 799999999999998 7898888873 34444444432 245689999999999988
Q ss_pred Hh-------ccCeeEeccCCC
Q 014694 86 CS-------QTKLLLNCVGPY 99 (420)
Q Consensus 86 ~~-------~~dvVIn~aGp~ 99 (420)
++ ..|++||+||..
T Consensus 79 ~~~~~~~~g~iD~lv~nAG~~ 99 (272)
T PRK08159 79 FETLEKKWGKLDFVVHAIGFS 99 (272)
T ss_pred HHHHHHhcCCCcEEEECCccc
Confidence 75 369999999964
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.33 E-value=2.9e-06 Score=81.57 Aligned_cols=81 Identities=10% Similarity=0.087 Sum_probs=60.3
Q ss_pred ceEEEEcC--CcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 11 FDVIILGA--SGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 11 ~~IvV~GA--TG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
..++|+|| ++.||+.+++.|++++ .+|++.+|+. +.++.++++.. .......+.+|+.|+++++++++
T Consensus 7 k~~lITGa~~~~GIG~a~a~~l~~~G-------~~v~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~ 77 (261)
T PRK08690 7 KKILITGMISERSIAYGIAKACREQG-------AELAFTYVVD-KLEERVRKMAA-ELDSELVFRCDVASDDEINQVFAD 77 (261)
T ss_pred cEEEEECCCCCCcHHHHHHHHHHHCC-------CEEEEEcCcH-HHHHHHHHHHh-ccCCceEEECCCCCHHHHHHHHHH
Confidence 47999997 6799999999999998 7898887763 33333333321 11234578999999999998875
Q ss_pred ------ccCeeEeccCCCC
Q 014694 88 ------QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (420)
+.|++|||||...
T Consensus 78 ~~~~~g~iD~lVnnAG~~~ 96 (261)
T PRK08690 78 LGKHWDGLDGLVHSIGFAP 96 (261)
T ss_pred HHHHhCCCcEEEECCccCC
Confidence 4799999999753
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.33 E-value=1.7e-06 Score=84.77 Aligned_cols=81 Identities=10% Similarity=0.055 Sum_probs=61.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh--hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~--~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
..++|+||+|++|+.+++.|++++ ++|++.+|+. ++++++.+.+.. ...++.++.+|++|++++.++++
T Consensus 50 k~vlITGas~gIG~aia~~L~~~G-------~~Vi~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~ 121 (294)
T PRK07985 50 RKALVTGGDSGIGRAAAIAYAREG-------ADVAISYLPVEEEDAQDVKKIIEE-CGRKAVLLPGDLSDEKFARSLVHE 121 (294)
T ss_pred CEEEEECCCCcHHHHHHHHHHHCC-------CEEEEecCCcchhhHHHHHHHHHH-cCCeEEEEEccCCCHHHHHHHHHH
Confidence 479999999999999999999998 7888887653 344444433321 12356688999999998888765
Q ss_pred ------ccCeeEeccCCC
Q 014694 88 ------QTKLLLNCVGPY 99 (420)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (420)
..|++||++|..
T Consensus 122 ~~~~~g~id~lv~~Ag~~ 139 (294)
T PRK07985 122 AHKALGGLDIMALVAGKQ 139 (294)
T ss_pred HHHHhCCCCEEEECCCCC
Confidence 369999999853
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.32 E-value=2.5e-06 Score=80.87 Aligned_cols=73 Identities=16% Similarity=0.206 Sum_probs=61.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~-- 88 (420)
..++|+||+|++|+.++++|++++ ++|++.+|+. + .. ...++.++.+|+.|++++.+++++
T Consensus 9 k~vlItGas~~iG~~la~~l~~~G-------~~v~~~~~~~--~----~~----~~~~~~~~~~D~~~~~~~~~~~~~~~ 71 (252)
T PRK08220 9 KTVWVTGAAQGIGYAVALAFVEAG-------AKVIGFDQAF--L----TQ----EDYPFATFVLDVSDAAAVAQVCQRLL 71 (252)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEecch--h----hh----cCCceEEEEecCCCHHHHHHHHHHHH
Confidence 479999999999999999999988 7999999986 1 11 124577899999999999998864
Q ss_pred -----cCeeEeccCCCC
Q 014694 89 -----TKLLLNCVGPYR 100 (420)
Q Consensus 89 -----~dvVIn~aGp~~ 100 (420)
.|+|||++|...
T Consensus 72 ~~~~~id~vi~~ag~~~ 88 (252)
T PRK08220 72 AETGPLDVLVNAAGILR 88 (252)
T ss_pred HHcCCCCEEEECCCcCC
Confidence 699999999653
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.31 E-value=2.5e-06 Score=79.87 Aligned_cols=71 Identities=15% Similarity=0.074 Sum_probs=59.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..|+|+||+|++|+.++++|++++ .+|++.+|+.++. . ...++.+|++|++++++++.
T Consensus 4 k~vlItG~s~~iG~~ia~~l~~~G-------~~v~~~~r~~~~~------~------~~~~~~~D~~~~~~~~~~~~~~~ 64 (234)
T PRK07577 4 RTVLVTGATKGIGLALSLRLANLG-------HQVIGIARSAIDD------F------PGELFACDLADIEQTAATLAQIN 64 (234)
T ss_pred CEEEEECCCCcHHHHHHHHHHHCC-------CEEEEEeCCcccc------c------CceEEEeeCCCHHHHHHHHHHHH
Confidence 469999999999999999999988 7899999987541 1 12578999999999888876
Q ss_pred ---ccCeeEeccCCCC
Q 014694 88 ---QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ---~~dvVIn~aGp~~ 100 (420)
++|+|||++|...
T Consensus 65 ~~~~~d~vi~~ag~~~ 80 (234)
T PRK07577 65 EIHPVDAIVNNVGIAL 80 (234)
T ss_pred HhCCCcEEEECCCCCC
Confidence 5799999999754
|
|
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=98.29 E-value=1.8e-06 Score=82.99 Aligned_cols=96 Identities=11% Similarity=0.219 Sum_probs=77.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~-- 88 (420)
|+|+|+||||. |+.+++.|.+.+ ++|.+..|+....+.+.+ ....-+..+..|.+++.+++++
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~g-------~~v~~s~~t~~~~~~~~~-------~g~~~v~~g~l~~~~l~~~l~~~~ 65 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQG-------IEILVTVTTSEGKHLYPI-------HQALTVHTGALDPQELREFLKRHS 65 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhCC-------CeEEEEEccCCccccccc-------cCCceEEECCCCHHHHHHHHHhcC
Confidence 57999999999 999999999887 789888888765433221 1123455677788889888874
Q ss_pred cCeeEeccCCCCC-CcHHHHHHHHHcCCcEEecC
Q 014694 89 TKLLLNCVGPYRL-HGDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 89 ~dvVIn~aGp~~~-~~~~vv~Ac~~~g~~yvdis 121 (420)
.|+||+++.||.. ...++.++|.+.|+.|+.+-
T Consensus 66 i~~VIDAtHPfA~~is~~a~~a~~~~~ipylR~e 99 (256)
T TIGR00715 66 IDILVDATHPFAAQITTNATAVCKELGIPYVRFE 99 (256)
T ss_pred CCEEEEcCCHHHHHHHHHHHHHHHHhCCcEEEEE
Confidence 8999999999864 46899999999999999983
|
This enzyme was found to be a monomer by gel filtration. |
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.29 E-value=3.3e-06 Score=81.79 Aligned_cols=77 Identities=14% Similarity=0.107 Sum_probs=60.0
Q ss_pred ceEEEEcCCc--HHHHHHHHHHHHhCCCCCCCcceEEEEecChhHH---HHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 014694 11 FDVIILGASG--FTGKYVVREALKLFNFPSSPIKSLALAGRNPTRV---KQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 11 ~~IvV~GATG--~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl---~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~ 85 (420)
..++|+||++ .||+.+++.|++++ .+|++.+|+.... +++.++++ ....+.+|++|+++++++
T Consensus 8 k~~lVTGas~~~GIG~aiA~~la~~G-------a~V~~~~r~~~~~~~~~~~~~~~g-----~~~~~~~Dv~d~~~v~~~ 75 (271)
T PRK06505 8 KRGLIMGVANDHSIAWGIAKQLAAQG-------AELAFTYQGEALGKRVKPLAESLG-----SDFVLPCDVEDIASVDAV 75 (271)
T ss_pred CEEEEeCCCCCCcHHHHHHHHHHhCC-------CEEEEecCchHHHHHHHHHHHhcC-----CceEEeCCCCCHHHHHHH
Confidence 3699999996 99999999999998 7999999986433 22222221 224688999999999888
Q ss_pred Hh-------ccCeeEeccCCC
Q 014694 86 CS-------QTKLLLNCVGPY 99 (420)
Q Consensus 86 ~~-------~~dvVIn~aGp~ 99 (420)
++ ..|++||+||..
T Consensus 76 ~~~~~~~~g~iD~lVnnAG~~ 96 (271)
T PRK06505 76 FEALEKKWGKLDFVVHAIGFS 96 (271)
T ss_pred HHHHHHHhCCCCEEEECCccC
Confidence 75 469999999964
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=98.29 E-value=2.8e-06 Score=74.88 Aligned_cols=81 Identities=17% Similarity=0.184 Sum_probs=60.5
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHH---HHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQA---LQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~---~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
.++|+||+|++|..++++|++++. ..+.+.+|+.++.+.. .+++.. ...++.++.+|+++++++++++..
T Consensus 2 ~~li~Ga~~~iG~~~~~~l~~~g~------~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~ 74 (180)
T smart00822 2 TYLITGGLGGLGLELARWLAERGA------RHLVLLSRSGPDAPGAAELLAELEA-LGAEVTVVACDVADRAALAAALAA 74 (180)
T ss_pred EEEEEcCCChHHHHHHHHHHHhhC------CeEEEEeCCCCCCccHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHH
Confidence 589999999999999999998872 4688888876543322 122221 124567788999999998888764
Q ss_pred -------cCeeEeccCCC
Q 014694 89 -------TKLLLNCVGPY 99 (420)
Q Consensus 89 -------~dvVIn~aGp~ 99 (420)
.|.|||++|..
T Consensus 75 ~~~~~~~id~li~~ag~~ 92 (180)
T smart00822 75 IPARLGPLRGVIHAAGVL 92 (180)
T ss_pred HHHHcCCeeEEEEccccC
Confidence 59999999964
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.26 E-value=5.3e-06 Score=82.58 Aligned_cols=104 Identities=15% Similarity=0.216 Sum_probs=75.2
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh---HHHHHHHHhC---C---CCCCCccEEEEeCC-----
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT---RVKQALQWAS---P---SHSLSIPILTADTT----- 77 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~---kl~~~~~~l~---~---~~~~~~~~i~~D~~----- 77 (420)
+|++||||||+|.+++++|+...+ .+|.+..|-.+ .++++.+.+. . ....++.++.+|+.
T Consensus 2 ~vlLTGATGFLG~yLl~eLL~~~~------~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lG 75 (382)
T COG3320 2 NVLLTGATGFLGAYLLLELLDRSD------AKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLG 75 (382)
T ss_pred eEEEecCchHhHHHHHHHHHhcCC------CcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCC
Confidence 689999999999999999998863 68998888433 2333333322 1 13467889999987
Q ss_pred -CHHHHHHHHhccCeeEeccCCCCC---C---------c-HHHHHHHHHcCCc-EEecC
Q 014694 78 -DPPSLHRLCSQTKLLLNCVGPYRL---H---------G-DPVAAACVHSGCD-YLDIS 121 (420)
Q Consensus 78 -d~~sl~~~~~~~dvVIn~aGp~~~---~---------~-~~vv~Ac~~~g~~-yvdis 121 (420)
+.....+++.++|.|||+++-.+. | | ..+++.|...+.+ +..+|
T Consensus 76 L~~~~~~~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVS 134 (382)
T COG3320 76 LSERTWQELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATGKPKPLHYVS 134 (382)
T ss_pred CCHHHHHHHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEe
Confidence 567899999999999999985432 1 1 6788888876653 44444
|
|
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.24 E-value=7e-06 Score=74.49 Aligned_cols=82 Identities=15% Similarity=0.126 Sum_probs=70.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
...+|+||+..||+.|++.|++++ +++++++++.+..++....|+ ...+...+.||+.++.+++.+++
T Consensus 15 k~~~vtGg~sGIGrAia~~la~~G-------arv~v~dl~~~~A~ata~~L~--g~~~h~aF~~DVS~a~~v~~~l~e~~ 85 (256)
T KOG1200|consen 15 KVAAVTGGSSGIGRAIAQLLAKKG-------ARVAVADLDSAAAEATAGDLG--GYGDHSAFSCDVSKAHDVQNTLEEME 85 (256)
T ss_pred ceeEEecCCchHHHHHHHHHHhcC-------cEEEEeecchhhHHHHHhhcC--CCCccceeeeccCcHHHHHHHHHHHH
Confidence 358999999999999999999998 899999999998888888875 23466789999999998888665
Q ss_pred ----ccCeeEeccCCCCC
Q 014694 88 ----QTKLLLNCVGPYRL 101 (420)
Q Consensus 88 ----~~dvVIn~aGp~~~ 101 (420)
..++|+||||....
T Consensus 86 k~~g~psvlVncAGItrD 103 (256)
T KOG1200|consen 86 KSLGTPSVLVNCAGITRD 103 (256)
T ss_pred HhcCCCcEEEEcCccccc
Confidence 46899999998654
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.24 E-value=6.3e-06 Score=79.19 Aligned_cols=80 Identities=15% Similarity=0.057 Sum_probs=59.4
Q ss_pred ceEEEEcCCc--HHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 11 FDVIILGASG--FTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 11 ~~IvV~GATG--~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
..++|+||++ .||+.+++.|++++ ++|++.+|+. ++++.++++.. ......++.+|++|+++++++++
T Consensus 9 k~~lITGas~~~GIG~a~a~~la~~G-------~~v~~~~r~~-~~~~~~~~l~~-~~g~~~~~~~Dv~~~~~v~~~~~~ 79 (260)
T PRK06603 9 KKGLITGIANNMSISWAIAQLAKKHG-------AELWFTYQSE-VLEKRVKPLAE-EIGCNFVSELDVTNPKSISNLFDD 79 (260)
T ss_pred cEEEEECCCCCcchHHHHHHHHHHcC-------CEEEEEeCch-HHHHHHHHHHH-hcCCceEEEccCCCHHHHHHHHHH
Confidence 3699999997 89999999999988 7899989884 33333333321 01122357899999999998875
Q ss_pred ------ccCeeEeccCCC
Q 014694 88 ------QTKLLLNCVGPY 99 (420)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (420)
..|++||++|..
T Consensus 80 ~~~~~g~iDilVnnag~~ 97 (260)
T PRK06603 80 IKEKWGSFDFLLHGMAFA 97 (260)
T ss_pred HHHHcCCccEEEEccccC
Confidence 379999999853
|
|
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.24 E-value=5.5e-06 Score=80.44 Aligned_cols=85 Identities=18% Similarity=0.209 Sum_probs=69.8
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC--CCCCCccEEEEeCCCHHHHHHHHh
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--SHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~--~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
.+.++|||++..||+.+|+.|++.+ .+|++.+|+++++++..+++.. ....++..+.+|+.+.+..++++.
T Consensus 8 gkvalVTG~s~GIG~aia~~la~~G-------a~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~ 80 (270)
T KOG0725|consen 8 GKVALVTGGSSGIGKAIALLLAKAG-------AKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVE 80 (270)
T ss_pred CcEEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHH
Confidence 3579999999999999999999998 8999999999999888776542 112457789999998887777654
Q ss_pred --------ccCeeEeccCCCCC
Q 014694 88 --------QTKLLLNCVGPYRL 101 (420)
Q Consensus 88 --------~~dvVIn~aGp~~~ 101 (420)
+.|++||++|....
T Consensus 81 ~~~~~~~GkidiLvnnag~~~~ 102 (270)
T KOG0725|consen 81 FAVEKFFGKIDILVNNAGALGL 102 (270)
T ss_pred HHHHHhCCCCCEEEEcCCcCCC
Confidence 57999999997554
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=98.22 E-value=4.3e-06 Score=78.53 Aligned_cols=76 Identities=25% Similarity=0.397 Sum_probs=58.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
|+|+|+||+|+||+.++++|++++. ...+.+..|+.... . ...++.++++|++|.++++++.+
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~-----~~~v~~~~~~~~~~------~---~~~~~~~~~~Dls~~~~~~~~~~~~~ 66 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYP-----DATVHATYRHHKPD------F---QHDNVQWHALDVTDEAEIKQLSEQFT 66 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCC-----CCEEEEEccCCccc------c---ccCceEEEEecCCCHHHHHHHHHhcC
Confidence 4799999999999999999999852 15666666654321 1 12467789999999998877654
Q ss_pred ccCeeEeccCCCC
Q 014694 88 QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ~~dvVIn~aGp~~ 100 (420)
+.|+|||++|...
T Consensus 67 ~id~li~~aG~~~ 79 (235)
T PRK09009 67 QLDWLINCVGMLH 79 (235)
T ss_pred CCCEEEECCcccc
Confidence 6899999999754
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=98.21 E-value=3.7e-06 Score=76.62 Aligned_cols=82 Identities=20% Similarity=0.255 Sum_probs=57.2
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh---hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP---TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~---~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
.++|+|++|.+|..++++|++++. .++++.+|+. .+.++..+++.. ...++.++.+|++|++++.+++++
T Consensus 2 tylitGG~gglg~~la~~La~~~~------~~~il~~r~~~~~~~~~~~i~~l~~-~g~~v~~~~~Dv~d~~~v~~~~~~ 74 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGA------RRLILLGRSGAPSAEAEAAIRELES-AGARVEYVQCDVTDPEAVAAALAQ 74 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-------SEEEEEESSGGGSTTHHHHHHHHHH-TT-EEEEEE--TTSHHHHHHHHHT
T ss_pred EEEEECCccHHHHHHHHHHHHcCC------CEEEEeccCCCccHHHHHHHHHHHh-CCCceeeeccCccCHHHHHHHHHH
Confidence 479999999999999999999983 6899999992 233344444431 245788899999999999999875
Q ss_pred -------cCeeEeccCCCC
Q 014694 89 -------TKLLLNCVGPYR 100 (420)
Q Consensus 89 -------~dvVIn~aGp~~ 100 (420)
.+.|||++|...
T Consensus 75 ~~~~~~~i~gVih~ag~~~ 93 (181)
T PF08659_consen 75 LRQRFGPIDGVIHAAGVLA 93 (181)
T ss_dssp SHTTSS-EEEEEE------
T ss_pred HHhccCCcceeeeeeeeec
Confidence 367999999753
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=98.21 E-value=5.4e-06 Score=79.55 Aligned_cols=81 Identities=10% Similarity=0.103 Sum_probs=60.0
Q ss_pred ceEEEEcCC--cHHHHHHHHHHHHhCCCCCCCcceEEEEecChh--HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 014694 11 FDVIILGAS--GFTGKYVVREALKLFNFPSSPIKSLALAGRNPT--RVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 11 ~~IvV~GAT--G~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~--kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
..++|+||+ +.||+.+++.|++++ .+|++..|+.+ +.++.++++.. ...+..++.+|++|++++++++
T Consensus 7 k~~lItGas~~~GIG~aia~~la~~G-------~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~v~~~~ 78 (258)
T PRK07370 7 KKALVTGIANNRSIAWGIAQQLHAAG-------AELGITYLPDEKGRFEKKVRELTE-PLNPSLFLPCDVQDDAQIEETF 78 (258)
T ss_pred cEEEEeCCCCCCchHHHHHHHHHHCC-------CEEEEEecCcccchHHHHHHHHHh-ccCcceEeecCcCCHHHHHHHH
Confidence 469999986 799999999999998 78888765432 23333333321 1124567889999999999887
Q ss_pred h-------ccCeeEeccCCC
Q 014694 87 S-------QTKLLLNCVGPY 99 (420)
Q Consensus 87 ~-------~~dvVIn~aGp~ 99 (420)
+ ..|++|||+|..
T Consensus 79 ~~~~~~~g~iD~lv~nag~~ 98 (258)
T PRK07370 79 ETIKQKWGKLDILVHCLAFA 98 (258)
T ss_pred HHHHHHcCCCCEEEEccccc
Confidence 5 469999999964
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=98.20 E-value=5.8e-06 Score=90.20 Aligned_cols=82 Identities=16% Similarity=0.207 Sum_probs=62.0
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
..|+|+|+||+||+|++++++|.+++ ++|.+. ..|++|.+.+.+.++
T Consensus 379 ~~mkiLVtGa~G~iG~~l~~~L~~~g-------~~v~~~-------------------------~~~l~d~~~v~~~i~~ 426 (668)
T PLN02260 379 PSLKFLIYGRTGWIGGLLGKLCEKQG-------IAYEYG-------------------------KGRLEDRSSLLADIRN 426 (668)
T ss_pred CCceEEEECCCchHHHHHHHHHHhCC-------CeEEee-------------------------ccccccHHHHHHHHHh
Confidence 55789999999999999999998876 555211 124567777777776
Q ss_pred -ccCeeEeccCCCC---C-C---------------cHHHHHHHHHcCCcEEecCC
Q 014694 88 -QTKLLLNCVGPYR---L-H---------------GDPVAAACVHSGCDYLDISG 122 (420)
Q Consensus 88 -~~dvVIn~aGp~~---~-~---------------~~~vv~Ac~~~g~~yvdisg 122 (420)
+.|+|||||+... . . ..+++++|.+.|++.+.+|.
T Consensus 427 ~~pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~~~v~~Ss 481 (668)
T PLN02260 427 VKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGLLMMNFAT 481 (668)
T ss_pred hCCCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCCeEEEEcc
Confidence 6899999998642 1 0 17789999999998777743
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.19 E-value=7.7e-06 Score=78.61 Aligned_cols=77 Identities=13% Similarity=0.077 Sum_probs=59.9
Q ss_pred ceEEEEcC--CcHHHHHHHHHHHHhCCCCCCCcceEEEEec---ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 014694 11 FDVIILGA--SGFTGKYVVREALKLFNFPSSPIKSLALAGR---NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 11 ~~IvV~GA--TG~~G~~va~~L~~~~~~~~~~~~~v~iagR---s~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~ 85 (420)
..++|+|| ++.||+.+++.|++++ .+|++.+| +.++++++.++++ ....+.+|++|+++++++
T Consensus 7 k~vlItGas~~~GIG~a~a~~l~~~G-------~~v~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~Dv~d~~~v~~~ 74 (260)
T PRK06997 7 KRILITGLLSNRSIAYGIAKACKREG-------AELAFTYVGDRFKDRITEFAAEFG-----SDLVFPCDVASDEQIDAL 74 (260)
T ss_pred cEEEEeCCCCCCcHHHHHHHHHHHCC-------CeEEEEccchHHHHHHHHHHHhcC-----CcceeeccCCCHHHHHHH
Confidence 47999996 6799999999999988 78888765 3455555544432 234688999999999988
Q ss_pred Hh-------ccCeeEeccCCC
Q 014694 86 CS-------QTKLLLNCVGPY 99 (420)
Q Consensus 86 ~~-------~~dvVIn~aGp~ 99 (420)
++ ..|++||++|..
T Consensus 75 ~~~~~~~~g~iD~lvnnAG~~ 95 (260)
T PRK06997 75 FASLGQHWDGLDGLVHSIGFA 95 (260)
T ss_pred HHHHHHHhCCCcEEEEccccC
Confidence 75 479999999964
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.17 E-value=1.1e-05 Score=83.87 Aligned_cols=77 Identities=13% Similarity=0.090 Sum_probs=62.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC--hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN--PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs--~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
..++|+||+|++|+.++++|++++ .++++.+|+ .++++++.++++ ..++.+|++|+++++++++
T Consensus 211 ~~vlItGasggIG~~la~~l~~~G-------a~vi~~~~~~~~~~l~~~~~~~~------~~~~~~Dv~~~~~~~~~~~~ 277 (450)
T PRK08261 211 KVALVTGAARGIGAAIAEVLARDG-------AHVVCLDVPAAGEALAAVANRVG------GTALALDITAPDAPARIAEH 277 (450)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCC-------CEEEEEeCCccHHHHHHHHHHcC------CeEEEEeCCCHHHHHHHHHH
Confidence 479999999999999999999987 789888884 345555555442 3578999999999888776
Q ss_pred ------ccCeeEeccCCCC
Q 014694 88 ------QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (420)
..|+|||++|...
T Consensus 278 ~~~~~g~id~vi~~AG~~~ 296 (450)
T PRK08261 278 LAERHGGLDIVVHNAGITR 296 (450)
T ss_pred HHHhCCCCCEEEECCCcCC
Confidence 4799999999653
|
|
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.17 E-value=1.7e-05 Score=77.77 Aligned_cols=80 Identities=14% Similarity=0.099 Sum_probs=63.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh---hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP---TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~---~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
..++|+|| |.+|+.++..|++.+. -+|.+.+|+. ++++++.+++.. ....+.+..+|+.|.+++.+.++
T Consensus 127 k~vlI~GA-GGagrAia~~La~~G~------~~V~I~~R~~~~~~~a~~l~~~l~~-~~~~~~~~~~d~~~~~~~~~~~~ 198 (289)
T PRK12548 127 KKLTVIGA-GGAATAIQVQCALDGA------KEITIFNIKDDFYERAEQTAEKIKQ-EVPECIVNVYDLNDTEKLKAEIA 198 (289)
T ss_pred CEEEEECC-cHHHHHHHHHHHHCCC------CEEEEEeCCchHHHHHHHHHHHHhh-cCCCceeEEechhhhhHHHhhhc
Confidence 47999999 7999999999999872 3599999997 778777776642 12234566789988888988899
Q ss_pred ccCeeEeccCC
Q 014694 88 QTKLLLNCVGP 98 (420)
Q Consensus 88 ~~dvVIn~aGp 98 (420)
.+|+||||...
T Consensus 199 ~~DilINaTp~ 209 (289)
T PRK12548 199 SSDILVNATLV 209 (289)
T ss_pred cCCEEEEeCCC
Confidence 99999998854
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.16 E-value=8e-06 Score=77.89 Aligned_cols=81 Identities=14% Similarity=0.039 Sum_probs=60.7
Q ss_pred ceEEEEcCCc--HHHHHHHHHHHHhCCCCCCCcceEEEEecC-----------hhHHHHHHHHhCCCCCCCccEEEEeCC
Q 014694 11 FDVIILGASG--FTGKYVVREALKLFNFPSSPIKSLALAGRN-----------PTRVKQALQWASPSHSLSIPILTADTT 77 (420)
Q Consensus 11 ~~IvV~GATG--~~G~~va~~L~~~~~~~~~~~~~v~iagRs-----------~~kl~~~~~~l~~~~~~~~~~i~~D~~ 77 (420)
..|+|+|||| .+|..++++|++++ ++|++.+|+ ......+.+++.. ...++.++.+|++
T Consensus 6 k~vlItGas~~~giG~~la~~l~~~G-------~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~ 77 (256)
T PRK12748 6 KIALVTGASRLNGIGAAVCRRLAAKG-------IDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIES-YGVRCEHMEIDLS 77 (256)
T ss_pred cEEEEeCCCCCCCHHHHHHHHHHHcC-------CcEEEEcCCccccccccccchhhHHHHHHHHHh-cCCeEEEEECCCC
Confidence 3699999995 79999999999987 789999987 2221123333321 1245788999999
Q ss_pred CHHHHHHHHhc-------cCeeEeccCCC
Q 014694 78 DPPSLHRLCSQ-------TKLLLNCVGPY 99 (420)
Q Consensus 78 d~~sl~~~~~~-------~dvVIn~aGp~ 99 (420)
|.+++.+++++ .|+|||++|..
T Consensus 78 ~~~~~~~~~~~~~~~~g~id~vi~~ag~~ 106 (256)
T PRK12748 78 QPYAPNRVFYAVSERLGDPSILINNAAYS 106 (256)
T ss_pred CHHHHHHHHHHHHHhCCCCCEEEECCCcC
Confidence 99998887653 69999999864
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.16 E-value=4.6e-06 Score=78.24 Aligned_cols=72 Identities=21% Similarity=0.147 Sum_probs=57.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCH-HHHHHHHhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDP-PSLHRLCSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~-~sl~~~~~~~ 89 (420)
..++|+||+|++|+.++++|++++ ++|++.+|+.... . ..++.++.+|++|+ +.+.+.+...
T Consensus 6 k~~lVtGas~~iG~~ia~~l~~~G-------~~v~~~~r~~~~~------~----~~~~~~~~~D~~~~~~~~~~~~~~i 68 (235)
T PRK06550 6 KTVLITGAASGIGLAQARAFLAQG-------AQVYGVDKQDKPD------L----SGNFHFLQLDLSDDLEPLFDWVPSV 68 (235)
T ss_pred CEEEEcCCCchHHHHHHHHHHHCC-------CEEEEEeCCcccc------c----CCcEEEEECChHHHHHHHHHhhCCC
Confidence 479999999999999999999987 7899999985432 1 23567889999987 5555555678
Q ss_pred CeeEeccCCC
Q 014694 90 KLLLNCVGPY 99 (420)
Q Consensus 90 dvVIn~aGp~ 99 (420)
|+|||++|..
T Consensus 69 d~lv~~ag~~ 78 (235)
T PRK06550 69 DILCNTAGIL 78 (235)
T ss_pred CEEEECCCCC
Confidence 9999999953
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.11 E-value=1.5e-05 Score=76.14 Aligned_cols=81 Identities=12% Similarity=0.064 Sum_probs=60.6
Q ss_pred ceEEEEcCCc--HHHHHHHHHHHHhCCCCCCCcceEEEEecC-----------hhHHHHHHHHhCCCCCCCccEEEEeCC
Q 014694 11 FDVIILGASG--FTGKYVVREALKLFNFPSSPIKSLALAGRN-----------PTRVKQALQWASPSHSLSIPILTADTT 77 (420)
Q Consensus 11 ~~IvV~GATG--~~G~~va~~L~~~~~~~~~~~~~v~iagRs-----------~~kl~~~~~~l~~~~~~~~~~i~~D~~ 77 (420)
..++|+||+| .+|+.++++|++++ .+|++++|+ .++++++.+++.. ...++.++.+|++
T Consensus 7 k~vlVtGas~~~giG~~~a~~l~~~G-------~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~D~~ 78 (256)
T PRK12859 7 KVAVVTGVSRLDGIGAAICKELAEAG-------ADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLK-NGVKVSSMELDLT 78 (256)
T ss_pred cEEEEECCCCCCChHHHHHHHHHHCC-------CeEEEEecccccccccccccHHHHHHHHHHHHh-cCCeEEEEEcCCC
Confidence 4799999995 89999999999998 678877542 2333344444421 2345678899999
Q ss_pred CHHHHHHHHh-------ccCeeEeccCCC
Q 014694 78 DPPSLHRLCS-------QTKLLLNCVGPY 99 (420)
Q Consensus 78 d~~sl~~~~~-------~~dvVIn~aGp~ 99 (420)
|.+++.+++. ..|+|||++|..
T Consensus 79 ~~~~i~~~~~~~~~~~g~id~li~~ag~~ 107 (256)
T PRK12859 79 QNDAPKELLNKVTEQLGYPHILVNNAAYS 107 (256)
T ss_pred CHHHHHHHHHHHHHHcCCCcEEEECCCCC
Confidence 9999988875 369999999964
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.04 E-value=4.7e-06 Score=79.59 Aligned_cols=66 Identities=18% Similarity=0.270 Sum_probs=48.9
Q ss_pred EEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-ccCe
Q 014694 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-QTKL 91 (420)
Q Consensus 13 IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-~~dv 91 (420)
|+|+|||||||++++..|.+.+ ++|.+..|+..+.+.... ..+. .-+.+..... ++|+
T Consensus 1 IliTGgTGlIG~~L~~~L~~~g-------h~v~iltR~~~~~~~~~~-------~~v~-------~~~~~~~~~~~~~Da 59 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGG-------HQVTILTRRPPKASQNLH-------PNVT-------LWEGLADALTLGIDA 59 (297)
T ss_pred CeEeccccchhHHHHHHHHhCC-------CeEEEEEcCCcchhhhcC-------cccc-------ccchhhhcccCCCCE
Confidence 6899999999999999999987 799999999887643221 1111 1233444444 7999
Q ss_pred eEeccCCC
Q 014694 92 LLNCVGPY 99 (420)
Q Consensus 92 VIn~aGp~ 99 (420)
|||.||-.
T Consensus 60 vINLAG~~ 67 (297)
T COG1090 60 VINLAGEP 67 (297)
T ss_pred EEECCCCc
Confidence 99999953
|
|
| >PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate | Back alignment and domain information |
|---|
Probab=98.02 E-value=1.5e-05 Score=67.81 Aligned_cols=99 Identities=21% Similarity=0.306 Sum_probs=63.1
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceE-EEEecChhHHHHHHHHhCCCCCCCc-cEEEEeCCCHHHHHHHHhcc
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNPTRVKQALQWASPSHSLSI-PILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v-~iagRs~~kl~~~~~~l~~~~~~~~-~~i~~D~~d~~sl~~~~~~~ 89 (420)
+|.|+||||++|+.+++.|.++-+ +++ .+.+|+.+..+.+...... .... ....-+ .+.+.+ .++
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~------~e~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~-~~~~~~----~~~ 67 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPD------FELVALVSSSRSAGKPLSEVFPH--PKGFEDLSVED-ADPEEL----SDV 67 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTST------EEEEEEEESTTTTTSBHHHTTGG--GTTTEEEBEEE-TSGHHH----TTE
T ss_pred CEEEECCCCHHHHHHHHHHhcCCC------ccEEEeeeeccccCCeeehhccc--cccccceeEee-cchhHh----hcC
Confidence 589999999999999999999642 554 4455555232222221110 0111 122222 333333 889
Q ss_pred CeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHH
Q 014694 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPE 125 (420)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~ 125 (420)
|+||.|.+.. ....++..+.+.|+..||+|++..
T Consensus 68 Dvvf~a~~~~--~~~~~~~~~~~~g~~ViD~s~~~R 101 (121)
T PF01118_consen 68 DVVFLALPHG--ASKELAPKLLKAGIKVIDLSGDFR 101 (121)
T ss_dssp SEEEE-SCHH--HHHHHHHHHHHTTSEEEESSSTTT
T ss_pred CEEEecCchh--HHHHHHHHHhhCCcEEEeCCHHHh
Confidence 9999998643 236788888999999999998763
|
This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C .... |
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.97 E-value=2.4e-05 Score=71.77 Aligned_cols=63 Identities=30% Similarity=0.500 Sum_probs=53.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
|+++|+||+|++|+.++++|+++ .+|++.+|+.+ .+.+|++|+++++++++
T Consensus 1 ~~vlItGas~giG~~la~~l~~~--------~~vi~~~r~~~------------------~~~~D~~~~~~~~~~~~~~~ 54 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR--------HEVITAGRSSG------------------DVQVDITDPASIRALFEKVG 54 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc--------CcEEEEecCCC------------------ceEecCCChHHHHHHHHhcC
Confidence 36999999999999999999876 36788888642 25789999999999887
Q ss_pred ccCeeEeccCCC
Q 014694 88 QTKLLLNCVGPY 99 (420)
Q Consensus 88 ~~dvVIn~aGp~ 99 (420)
+.|+|||++|..
T Consensus 55 ~id~lv~~ag~~ 66 (199)
T PRK07578 55 KVDAVVSAAGKV 66 (199)
T ss_pred CCCEEEECCCCC
Confidence 579999999964
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=97.93 E-value=6.7e-05 Score=71.05 Aligned_cols=84 Identities=18% Similarity=0.175 Sum_probs=61.5
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhH--HHHHHHHhCCCCC-CCccEEEEeCCC-HHHHHH
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR--VKQALQWASPSHS-LSIPILTADTTD-PPSLHR 84 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~k--l~~~~~~l~~~~~-~~~~~i~~D~~d-~~sl~~ 84 (420)
....|+|+||++.+|+.+++.|++++ .+++++.|+.+. ++.+.+... ... ..+.+..+|+++ .++++.
T Consensus 4 ~~~~ilITGas~GiG~aia~~l~~~G-------~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dvs~~~~~v~~ 75 (251)
T COG1028 4 SGKVALVTGASSGIGRAIARALAREG-------ARVVVAARRSEEEAAEALAAAIK-EAGGGRAAAVAADVSDDEESVEA 75 (251)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCC-------CeEEEEcCCCchhhHHHHHHHHH-hcCCCcEEEEEecCCCCHHHHHH
Confidence 34579999999999999999999877 787877877553 333333221 011 245677799998 888887
Q ss_pred HHh-------ccCeeEeccCCCC
Q 014694 85 LCS-------QTKLLLNCVGPYR 100 (420)
Q Consensus 85 ~~~-------~~dvVIn~aGp~~ 100 (420)
+++ +.|++||+||...
T Consensus 76 ~~~~~~~~~g~id~lvnnAg~~~ 98 (251)
T COG1028 76 LVAAAEEEFGRIDILVNNAGIAG 98 (251)
T ss_pred HHHHHHHHcCCCCEEEECCCCCC
Confidence 765 3789999999754
|
|
| >KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.90 E-value=8.9e-05 Score=68.97 Aligned_cols=109 Identities=22% Similarity=0.221 Sum_probs=76.7
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEe-cChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAG-RNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iag-Rs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
.|+|+||+-.||.-++++|.+... .+++++. |++++..+.++... ....++.+++.|+++.++++++++
T Consensus 5 sv~ItGaNRGIGlgLVk~llk~~~------i~~iiat~r~~e~a~~~l~~k~-~~d~rvHii~Ldvt~deS~~~~~~~V~ 77 (249)
T KOG1611|consen 5 SVFITGANRGIGLGLVKELLKDKG------IEVIIATARDPEKAATELALKS-KSDSRVHIIQLDVTCDESIDNFVQEVE 77 (249)
T ss_pred cEEEeccCcchhHHHHHHHhcCCC------cEEEEEecCChHHhhHHHHHhh-ccCCceEEEEEecccHHHHHHHHHHHH
Confidence 499999999999999999997652 5555555 66888433333221 135789999999999999999876
Q ss_pred ------ccCeeEeccCCCCCCc------HHHHHHHHHcCCcEEecCCcHHHHHHHHH
Q 014694 88 ------QTKLLLNCVGPYRLHG------DPVAAACVHSGCDYLDISGEPEFMERMEA 132 (420)
Q Consensus 88 ------~~dvVIn~aGp~~~~~------~~vv~Ac~~~g~~yvdisge~~~~~~~~~ 132 (420)
+.+++||++|.+..|. ..++-.|.+.++ .|.....+.++.
T Consensus 78 ~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~-----v~~il~~Q~~lP 129 (249)
T KOG1611|consen 78 KIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNA-----VGPILLTQAFLP 129 (249)
T ss_pred hhcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcc-----hhHHHHHHHHHH
Confidence 4689999999876653 444555554433 344444555554
|
|
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.88 E-value=9.7e-05 Score=68.11 Aligned_cols=92 Identities=17% Similarity=0.142 Sum_probs=69.9
Q ss_pred CcceEEEEc-CCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh
Q 014694 9 ELFDVIILG-ASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 9 ~~~~IvV~G-ATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
.+..|+|+| +.|.||..+++++.++| +.|....|+.+...++..+. ++...+.|+++++++.++..
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G-------~~V~AtaR~~e~M~~L~~~~------gl~~~kLDV~~~~~V~~v~~ 72 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNG-------YLVYATARRLEPMAQLAIQF------GLKPYKLDVSKPEEVVTVSG 72 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCC-------eEEEEEccccchHhhHHHhh------CCeeEEeccCChHHHHHHHH
Confidence 445677777 56999999999999998 89999999999887776544 47889999999999888754
Q ss_pred --------ccCeeEeccCC-----CCCCcHHHHHHHHHc
Q 014694 88 --------QTKLLLNCVGP-----YRLHGDPVAAACVHS 113 (420)
Q Consensus 88 --------~~dvVIn~aGp-----~~~~~~~vv~Ac~~~ 113 (420)
..|+++|+||. .......-++-|-+.
T Consensus 73 evr~~~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~v 111 (289)
T KOG1209|consen 73 EVRANPDGKLDLLYNNAGQSCTFPALDATIAAVEQCFKV 111 (289)
T ss_pred HHhhCCCCceEEEEcCCCCCcccccccCCHHHHHhhhcc
Confidence 35899999984 222334445555443
|
|
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=97.87 E-value=7.5e-05 Score=64.80 Aligned_cols=76 Identities=17% Similarity=0.225 Sum_probs=58.7
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
+..+++|+|| |.+|+.++.+|.+.+. -++.++.|+.++.+++.+.+. ...+-..++ +++.+.+.+
T Consensus 11 ~~~~vlviGa-Gg~ar~v~~~L~~~g~------~~i~i~nRt~~ra~~l~~~~~-----~~~~~~~~~---~~~~~~~~~ 75 (135)
T PF01488_consen 11 KGKRVLVIGA-GGAARAVAAALAALGA------KEITIVNRTPERAEALAEEFG-----GVNIEAIPL---EDLEEALQE 75 (135)
T ss_dssp TTSEEEEESS-SHHHHHHHHHHHHTTS------SEEEEEESSHHHHHHHHHHHT-----GCSEEEEEG---GGHCHHHHT
T ss_pred CCCEEEEECC-HHHHHHHHHHHHHcCC------CEEEEEECCHHHHHHHHHHcC-----ccccceeeH---HHHHHHHhh
Confidence 3458999998 8899999999999983 469999999999999998873 223334444 345678889
Q ss_pred cCeeEeccCCC
Q 014694 89 TKLLLNCVGPY 99 (420)
Q Consensus 89 ~dvVIn~aGp~ 99 (420)
+|+||||.+.-
T Consensus 76 ~DivI~aT~~~ 86 (135)
T PF01488_consen 76 ADIVINATPSG 86 (135)
T ss_dssp ESEEEE-SSTT
T ss_pred CCeEEEecCCC
Confidence 99999998743
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.87 E-value=7.3e-05 Score=75.89 Aligned_cols=105 Identities=19% Similarity=0.247 Sum_probs=71.5
Q ss_pred CCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCH-HHHHHH
Q 014694 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDP-PSLHRL 85 (420)
Q Consensus 7 ~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~-~sl~~~ 85 (420)
+.++.+|+|.||||.+|+.+++.|.+++ +.+....|+.++.+.+..... .......+..|...+ +.+.++
T Consensus 76 ~~~~~~VlVvGatG~vG~~iv~~llkrg-------f~vra~VRd~~~a~~~~~~~~--~d~~~~~v~~~~~~~~d~~~~~ 146 (411)
T KOG1203|consen 76 SKKPTTVLVVGATGKVGRRIVKILLKRG-------FSVRALVRDEQKAEDLLGVFF--VDLGLQNVEADVVTAIDILKKL 146 (411)
T ss_pred CCCCCeEEEecCCCchhHHHHHHHHHCC-------CeeeeeccChhhhhhhhcccc--cccccceeeeccccccchhhhh
Confidence 4466789999999999999999999998 899999999988877655111 122344555554443 334444
Q ss_pred Hhcc----CeeEeccCCC--CC---C--------cHHHHHHHHHcCC-cEEec
Q 014694 86 CSQT----KLLLNCVGPY--RL---H--------GDPVAAACVHSGC-DYLDI 120 (420)
Q Consensus 86 ~~~~----dvVIn~aGp~--~~---~--------~~~vv~Ac~~~g~-~yvdi 120 (420)
+... .+++-|+|-. .. . -.++++||..+|+ |++.+
T Consensus 147 ~~~~~~~~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aGvk~~vlv 199 (411)
T KOG1203|consen 147 VEAVPKGVVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAGVKRVVLV 199 (411)
T ss_pred hhhccccceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHhCCceEEEE
Confidence 4432 3667776621 11 1 2889999999998 55555
|
|
| >KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.84 E-value=7.3e-05 Score=70.53 Aligned_cols=99 Identities=16% Similarity=0.125 Sum_probs=78.0
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC--C-CCCCccEEEEeCCCHHHHHHHHh-
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--S-HSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~--~-~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
-++|+|++..+|..+|.+|++..+.+ ..+.++++.|+.+|.+++...+.. + ...+++++.+|++|-.++.++.+
T Consensus 5 valITGanSglGl~i~~RLl~~~De~--~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~d 82 (341)
T KOG1478|consen 5 VALITGANSGLGLAICKRLLAEDDEN--VRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKD 82 (341)
T ss_pred EEEEecCCCcccHHHHHHHHhccCCc--eeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHH
Confidence 48999999999999999999986432 237889999999999988877754 1 12467889999999888877755
Q ss_pred ------ccCeeEeccCCCCCCcHHHHHHHHH
Q 014694 88 ------QTKLLLNCVGPYRLHGDPVAAACVH 112 (420)
Q Consensus 88 ------~~dvVIn~aGp~~~~~~~vv~Ac~~ 112 (420)
..|.|+-+||.....+.+...|...
T Consensus 83 i~~rf~~ld~iylNAg~~~~~gi~w~~avf~ 113 (341)
T KOG1478|consen 83 IKQRFQRLDYIYLNAGIMPNPGINWKAAVFG 113 (341)
T ss_pred HHHHhhhccEEEEccccCCCCcccHHHHHHH
Confidence 5799999999877777666666543
|
|
| >KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.84 E-value=5.7e-05 Score=70.29 Aligned_cols=83 Identities=14% Similarity=0.173 Sum_probs=65.9
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~-~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
...++++|+.|.||..+++.|++.+ ..+.++.-+.|+.+..++ |.. .....+-++++|+++..++++.++
T Consensus 5 GKna~vtggagGIGl~~sk~Ll~kg-------ik~~~i~~~~En~~a~ak-L~ai~p~~~v~F~~~DVt~~~~~~~~f~k 76 (261)
T KOG4169|consen 5 GKNALVTGGAGGIGLATSKALLEKG-------IKVLVIDDSEENPEAIAK-LQAINPSVSVIFIKCDVTNRGDLEAAFDK 76 (261)
T ss_pred CceEEEecCCchhhHHHHHHHHHcC-------chheeehhhhhCHHHHHH-HhccCCCceEEEEEeccccHHHHHHHHHH
Confidence 3479999999999999999999998 677777777777655443 322 234567899999999999988876
Q ss_pred ------ccCeeEeccCCCC
Q 014694 88 ------QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (420)
..|++||.||...
T Consensus 77 i~~~fg~iDIlINgAGi~~ 95 (261)
T KOG4169|consen 77 ILATFGTIDILINGAGILD 95 (261)
T ss_pred HHHHhCceEEEEccccccc
Confidence 4799999999865
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00011 Score=86.62 Aligned_cols=110 Identities=14% Similarity=0.200 Sum_probs=76.0
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhH---HHHHHHHhC---C---CCCCCccEEEEeCC---
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR---VKQALQWAS---P---SHSLSIPILTADTT--- 77 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~k---l~~~~~~l~---~---~~~~~~~~i~~D~~--- 77 (420)
..+|+|+|||||+|.+++++|++++.. ...+|.+..|+..+ ++.+.+.+. . ....++.++.+|+.
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~---~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~ 1047 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSN---SNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEK 1047 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCC---CCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCcc
Confidence 468999999999999999999987511 02688888897533 222222110 0 01136788999986
Q ss_pred ---CHHHHHHHHhccCeeEeccCCCCCC-------------cHHHHHHHHHcCC-cEEecCC
Q 014694 78 ---DPPSLHRLCSQTKLLLNCVGPYRLH-------------GDPVAAACVHSGC-DYLDISG 122 (420)
Q Consensus 78 ---d~~sl~~~~~~~dvVIn~aGp~~~~-------------~~~vv~Ac~~~g~-~yvdisg 122 (420)
+.+.+.++..++|+|||++++.... ..+++++|.+.+. +++.+|.
T Consensus 1048 lgl~~~~~~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS 1109 (1389)
T TIGR03443 1048 FGLSDEKWSDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSS 1109 (1389)
T ss_pred CCcCHHHHHHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeC
Confidence 4466778888999999999976532 1677888888776 4555554
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=97.82 E-value=4.2e-05 Score=72.33 Aligned_cols=76 Identities=21% Similarity=0.286 Sum_probs=59.3
Q ss_pred cCC--cHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-------
Q 014694 17 GAS--GFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS------- 87 (420)
Q Consensus 17 GAT--G~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~------- 87 (420)
|++ +.||+.+++.|+++| .+|++.+|+.++++..++++.. ....+++.+|++|+++++++++
T Consensus 1 g~~~s~GiG~aia~~l~~~G-------a~V~~~~~~~~~~~~~~~~l~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~~ 71 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEG-------ANVILTDRNEEKLADALEELAK--EYGAEVIQCDLSDEESVEALFDEAVERFG 71 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTT-------EEEEEEESSHHHHHHHHHHHHH--HTTSEEEESCTTSHHHHHHHHHHHHHHHC
T ss_pred CCCCCCChHHHHHHHHHHCC-------CEEEEEeCChHHHHHHHHHHHH--HcCCceEeecCcchHHHHHHHHHHHhhcC
Confidence 667 999999999999998 8999999999985444443321 1123479999999999999854
Q ss_pred -ccCeeEeccCCCCC
Q 014694 88 -QTKLLLNCVGPYRL 101 (420)
Q Consensus 88 -~~dvVIn~aGp~~~ 101 (420)
..|++||++|....
T Consensus 72 g~iD~lV~~a~~~~~ 86 (241)
T PF13561_consen 72 GRIDILVNNAGISPP 86 (241)
T ss_dssp SSESEEEEEEESCTG
T ss_pred CCeEEEEeccccccc
Confidence 46999999986543
|
... |
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.80 E-value=8.7e-05 Score=74.10 Aligned_cols=89 Identities=17% Similarity=0.118 Sum_probs=63.5
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHh-CCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 10 LFDVIILGASGFTGKYVVREALKL-FNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~-~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
..+|+|+||+|++|+.+|++|+++ +. .++.+.+|+.++++.+.+++. ..|+ .++.+.+.+
T Consensus 155 ~k~VLVtGAtG~IGs~lar~L~~~~gv------~~lilv~R~~~rl~~La~el~----------~~~i---~~l~~~l~~ 215 (340)
T PRK14982 155 KATVAVVGATGDIGSAVCRWLDAKTGV------AELLLVARQQERLQELQAELG----------GGKI---LSLEEALPE 215 (340)
T ss_pred CCEEEEEccChHHHHHHHHHHHhhCCC------CEEEEEcCCHHHHHHHHHHhc----------cccH---HhHHHHHcc
Confidence 357999999999999999999865 32 588999999999888776552 1222 246788899
Q ss_pred cCeeEeccCCCCCC--cHHHHHHHHHcCCcEEecC
Q 014694 89 TKLLLNCVGPYRLH--GDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 89 ~dvVIn~aGp~~~~--~~~vv~Ac~~~g~~yvdis 121 (420)
+|+|||+++-.... ... -.+.+.-.||++
T Consensus 216 aDiVv~~ts~~~~~~I~~~----~l~~~~~viDiA 246 (340)
T PRK14982 216 ADIVVWVASMPKGVEIDPE----TLKKPCLMIDGG 246 (340)
T ss_pred CCEEEECCcCCcCCcCCHH----HhCCCeEEEEec
Confidence 99999999853321 111 113445677773
|
|
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.0001 Score=73.54 Aligned_cols=88 Identities=14% Similarity=0.047 Sum_probs=56.0
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh--HHHHHHHHhCCCCCCCcc-EEEEeCCCHHHHHHH
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT--RVKQALQWASPSHSLSIP-ILTADTTDPPSLHRL 85 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~--kl~~~~~~l~~~~~~~~~-~i~~D~~d~~sl~~~ 85 (420)
++++|+|+||+|++|+.++..|+..+-.+.....++.+.+|++. +++....++. +.. ....|+....++.+.
T Consensus 1 ~~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~-----d~~~~~~~~~~~~~~~~~~ 75 (325)
T cd01336 1 EPIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQ-----DCAFPLLKSVVATTDPEEA 75 (325)
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehh-----hccccccCCceecCCHHHH
Confidence 36789999999999999999998854210000147999999653 3332211111 000 111244444667788
Q ss_pred HhccCeeEeccCCCCC
Q 014694 86 CSQTKLLLNCVGPYRL 101 (420)
Q Consensus 86 ~~~~dvVIn~aGp~~~ 101 (420)
++++|+|||+||....
T Consensus 76 l~~aDiVI~tAG~~~~ 91 (325)
T cd01336 76 FKDVDVAILVGAMPRK 91 (325)
T ss_pred hCCCCEEEEeCCcCCC
Confidence 8999999999997543
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated | Back alignment and domain information |
|---|
Probab=97.75 E-value=7.5e-05 Score=75.06 Aligned_cols=102 Identities=16% Similarity=0.133 Sum_probs=66.4
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEE-EEeCCCHHHHHHHHhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPIL-TADTTDPPSLHRLCSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i-~~D~~d~~sl~~~~~~~ 89 (420)
++|.|+||||++|+.+++.|.++. ..++..+.++.++.+.+.+... .+..+ ..++.+.+.. ...++
T Consensus 3 ~kVaIiGAtG~vG~~l~~~L~~~p------~~elv~v~~~~~~g~~l~~~~~-----~~~~~~~~~~~~~~~~--~~~~v 69 (343)
T PRK00436 3 IKVGIVGASGYTGGELLRLLLNHP------EVEIVAVTSRSSAGKPLSDVHP-----HLRGLVDLVLEPLDPE--ILAGA 69 (343)
T ss_pred eEEEEECCCCHHHHHHHHHHHcCC------CceEEEEECccccCcchHHhCc-----ccccccCceeecCCHH--HhcCC
Confidence 689999999999999999998763 1666554443333222222211 11111 1123333322 45789
Q ss_pred CeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHHH
Q 014694 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFM 127 (420)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~~ 127 (420)
|+|+-|.... ...+++.+|.++|+|.||+|+...+-
T Consensus 70 D~Vf~alP~~--~~~~~v~~a~~aG~~VID~S~~fR~~ 105 (343)
T PRK00436 70 DVVFLALPHG--VSMDLAPQLLEAGVKVIDLSADFRLK 105 (343)
T ss_pred CEEEECCCcH--HHHHHHHHHHhCCCEEEECCcccCCC
Confidence 9999888653 34788889999999999999988663
|
|
| >PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase | Back alignment and domain information |
|---|
Probab=97.74 E-value=4.5e-05 Score=77.59 Aligned_cols=104 Identities=16% Similarity=0.148 Sum_probs=67.8
Q ss_pred CCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-H
Q 014694 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-C 86 (420)
Q Consensus 8 ~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~-~ 86 (420)
.++++|.|+||||++|+.+++.|.++. ..++..+.++.++.+.+.+.. ..+...|+.+.++++.. +
T Consensus 36 ~~~~kVaIvGATG~vG~eLlrlL~~hP------~~el~~l~s~~saG~~i~~~~-------~~l~~~~~~~~~~~~~~~~ 102 (381)
T PLN02968 36 EEKKRIFVLGASGYTGAEVRRLLANHP------DFEITVMTADRKAGQSFGSVF-------PHLITQDLPNLVAVKDADF 102 (381)
T ss_pred ccccEEEEECCCChHHHHHHHHHHhCC------CCeEEEEEChhhcCCCchhhC-------ccccCccccceecCCHHHh
Confidence 466799999999999999999999883 278888777654432222111 11111222222222222 4
Q ss_pred hccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHHH
Q 014694 87 SQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFM 127 (420)
Q Consensus 87 ~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~~ 127 (420)
+++|+||.+.+. .....++.+. +.|+..||+|+...+-
T Consensus 103 ~~~DvVf~Alp~--~~s~~i~~~~-~~g~~VIDlSs~fRl~ 140 (381)
T PLN02968 103 SDVDAVFCCLPH--GTTQEIIKAL-PKDLKIVDLSADFRLR 140 (381)
T ss_pred cCCCEEEEcCCH--HHHHHHHHHH-hCCCEEEEcCchhccC
Confidence 789999998864 2346777775 6789999999887553
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00011 Score=72.48 Aligned_cols=81 Identities=9% Similarity=0.045 Sum_probs=59.2
Q ss_pred cceEEEEcC--CcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCC--------C-C---CCccEEEEe
Q 014694 10 LFDVIILGA--SGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS--------H-S---LSIPILTAD 75 (420)
Q Consensus 10 ~~~IvV~GA--TG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~--------~-~---~~~~~i~~D 75 (420)
...++|||| +..||..+++.|++.| .+|++ +|+.++|+++..++... . . .....+.+|
T Consensus 9 gk~alITGa~~s~GIG~a~A~~la~~G-------a~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 80 (303)
T PLN02730 9 GKRAFIAGVADDNGYGWAIAKALAAAG-------AEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLD 80 (303)
T ss_pred CCEEEEeCCCCCCcHHHHHHHHHHHCC-------CEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecc
Confidence 346999999 7999999999999998 78888 89888888777655310 0 0 113567788
Q ss_pred C--CCH------------------HHHHHHHh-------ccCeeEeccCC
Q 014694 76 T--TDP------------------PSLHRLCS-------QTKLLLNCVGP 98 (420)
Q Consensus 76 ~--~d~------------------~sl~~~~~-------~~dvVIn~aGp 98 (420)
+ .++ ++++++++ +.|++|||||.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~ 130 (303)
T PLN02730 81 AVFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLAN 130 (303)
T ss_pred eecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 8 333 36666655 47999999974
|
|
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00018 Score=63.20 Aligned_cols=100 Identities=20% Similarity=0.222 Sum_probs=70.5
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
..+|+|+|+ |.+|+.+++.|.+.+. .++.+.+|+.++.+++.+++.. .. +..+..| ..++++++
T Consensus 19 ~~~i~iiG~-G~~g~~~a~~l~~~g~------~~v~v~~r~~~~~~~~~~~~~~---~~---~~~~~~~---~~~~~~~~ 82 (155)
T cd01065 19 GKKVLILGA-GGAARAVAYALAELGA------AKIVIVNRTLEKAKALAERFGE---LG---IAIAYLD---LEELLAEA 82 (155)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCCC------CEEEEEcCCHHHHHHHHHHHhh---cc---cceeecc---hhhccccC
Confidence 457999997 8999999999998741 6899999999998887776641 11 2233334 33447899
Q ss_pred CeeEeccCCCCC--CcHHHHHHHHHcCCcEEecCCcHH
Q 014694 90 KLLLNCVGPYRL--HGDPVAAACVHSGCDYLDISGEPE 125 (420)
Q Consensus 90 dvVIn~aGp~~~--~~~~vv~Ac~~~g~~yvdisge~~ 125 (420)
|+||+|+.+... ....+...+.+.+...+|++..+.
T Consensus 83 Dvvi~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~~~~ 120 (155)
T cd01065 83 DLIINTTPVGMKPGDELPLPPSLLKPGGVVYDVVYNPL 120 (155)
T ss_pred CEEEeCcCCCCCCCCCCCCCHHHcCCCCEEEEcCcCCC
Confidence 999999987653 222233455677788888875544
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form | Back alignment and domain information |
|---|
Probab=97.68 E-value=8.3e-05 Score=74.81 Aligned_cols=104 Identities=17% Similarity=0.218 Sum_probs=64.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEE-EEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLA-LAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~-iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
++|.|+||||++|+.+++.|.++. ..++. +++++.+..+.+.+.... .........+-.| .+++.+++
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP------~~el~~l~~s~~sagk~~~~~~~~--l~~~~~~~~~~~~---~~~~~~~~ 69 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHP------EVEITYLVSSRESAGKPVSEVHPH--LRGLVDLNLEPID---EEEIAEDA 69 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCC------CceEEEEeccchhcCCChHHhCcc--ccccCCceeecCC---HHHhhcCC
Confidence 479999999999999999998763 16666 435433222122221110 0011011122113 23444689
Q ss_pred CeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHHH
Q 014694 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFM 127 (420)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~~ 127 (420)
|+||.|.+- .....++..+.++|++.||+|+....-
T Consensus 70 DvVf~alP~--~~s~~~~~~~~~~G~~VIDlS~~fR~~ 105 (346)
T TIGR01850 70 DVVFLALPH--GVSAELAPELLAAGVKVIDLSADFRLK 105 (346)
T ss_pred CEEEECCCc--hHHHHHHHHHHhCCCEEEeCChhhhcC
Confidence 999998853 234788888889999999999887654
|
This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons. |
| >KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00014 Score=70.83 Aligned_cols=82 Identities=16% Similarity=0.186 Sum_probs=69.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~-~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
-+|+|+|++..+|..++.++..++ ..|.+..|+.+|+.++...++. ....++.+..+|+.|-+++..++++.
T Consensus 34 ~hi~itggS~glgl~la~e~~~~g-------a~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l 106 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREG-------ADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEEL 106 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHcc-------CceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhh
Confidence 379999999999999999999998 6899999999999999888764 11233668889999999999998754
Q ss_pred -------CeeEeccCCC
Q 014694 90 -------KLLLNCVGPY 99 (420)
Q Consensus 90 -------dvVIn~aGp~ 99 (420)
|.+|||||-.
T Consensus 107 ~~~~~~~d~l~~cAG~~ 123 (331)
T KOG1210|consen 107 RDLEGPIDNLFCCAGVA 123 (331)
T ss_pred hhccCCcceEEEecCcc
Confidence 8999999954
|
|
| >PRK14874 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00016 Score=72.37 Aligned_cols=98 Identities=17% Similarity=0.132 Sum_probs=67.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
++|.|+||||++|+.+++.|.+++.+ ..++..+.|+.+..+.+. + ....+...|+.+. .++++|
T Consensus 2 ~~V~IvGAtG~vG~~l~~lL~~~~hp----~~~l~~l~s~~~~g~~l~--~-----~g~~i~v~d~~~~-----~~~~vD 65 (334)
T PRK14874 2 YNVAVVGATGAVGREMLNILEERNFP----VDKLRLLASARSAGKELS--F-----KGKELKVEDLTTF-----DFSGVD 65 (334)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCC----cceEEEEEccccCCCeee--e-----CCceeEEeeCCHH-----HHcCCC
Confidence 57999999999999999999986521 145666666544332221 1 1234455566432 236899
Q ss_pred eeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHH
Q 014694 91 LLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEF 126 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~ 126 (420)
+||.|+|-. ....++....++|+..||+|+...+
T Consensus 66 vVf~A~g~g--~s~~~~~~~~~~G~~VIDlS~~~R~ 99 (334)
T PRK14874 66 IALFSAGGS--VSKKYAPKAAAAGAVVIDNSSAFRM 99 (334)
T ss_pred EEEECCChH--HHHHHHHHHHhCCCEEEECCchhhc
Confidence 999998754 3467777778899999999987643
|
|
| >KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00023 Score=70.94 Aligned_cols=106 Identities=21% Similarity=0.323 Sum_probs=86.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHH-HHHHHHhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPP-SLHRLCSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~-sl~~~~~~~ 89 (420)
..|+++|+ ||+.+.++++|.++.+ .+|+++.|...+.+++.+. .+++.+..|+.|++ .|++.++..
T Consensus 3 ~~vlllgs-g~v~~p~~d~ls~~~d------v~vtva~~~~~~~~~~~~~------~~~~av~ldv~~~~~~L~~~v~~~ 69 (445)
T KOG0172|consen 3 KGVLLLGS-GFVSRPVADFLSRKKD------VNVTVASRTLKDAEALVKG------INIKAVSLDVADEELALRKEVKPL 69 (445)
T ss_pred cceEEecC-ccccchHHHHHhhcCC------ceEEEehhhHHHHHHHhcC------CCccceEEEccchHHHHHhhhccc
Confidence 36899985 9999999999999873 8999999999988887763 34788999999988 999999999
Q ss_pred CeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHHHHHHH
Q 014694 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERME 131 (420)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~~~~~~ 131 (420)
|+||+.. ||.. ...+.++|+.+..|.+..|--.+=++++-
T Consensus 70 D~viSLl-P~t~-h~lVaK~~i~~~~~~vtsSyv~pe~~~L~ 109 (445)
T KOG0172|consen 70 DLVISLL-PYTF-HPLVAKGCIITKEDSVTSSYVDPELEELE 109 (445)
T ss_pred ceeeeec-cchh-hHHHHHHHHHhhcccccccccCHHHHhhh
Confidence 9999887 5543 25778999999998877765555555543
|
|
| >PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00013 Score=72.95 Aligned_cols=101 Identities=19% Similarity=0.255 Sum_probs=64.1
Q ss_pred CCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh
Q 014694 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 8 ~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
++.++|.|+||||++|+.+++.|.++..+ ..++..+... ++.-+.+. + .. ...++.+.+.. . ++
T Consensus 2 ~~~~~IaIvGATG~vG~eLlrlL~~~~hP----~~~l~~v~s~-~~aG~~l~-~-----~~---~~l~~~~~~~~-~-~~ 65 (336)
T PRK05671 2 SQPLDIAVVGATGTVGEALVQILEERDFP----VGTLHLLASS-ESAGHSVP-F-----AG---KNLRVREVDSF-D-FS 65 (336)
T ss_pred CCCCEEEEEccCCHHHHHHHHHHhhCCCC----ceEEEEEECc-ccCCCeec-c-----CC---cceEEeeCChH-H-hc
Confidence 34479999999999999999999975421 2444444322 22110000 1 11 12333332222 2 47
Q ss_pred ccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHH
Q 014694 88 QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEF 126 (420)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~ 126 (420)
++|+|+-+++. .....++..+.++|+..||+|++..+
T Consensus 66 ~vD~vFla~p~--~~s~~~v~~~~~~G~~VIDlS~~fR~ 102 (336)
T PRK05671 66 QVQLAFFAAGA--AVSRSFAEKARAAGCSVIDLSGALPS 102 (336)
T ss_pred CCCEEEEcCCH--HHHHHHHHHHHHCCCeEEECchhhcC
Confidence 89999998864 33477888899999999999998753
|
|
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00047 Score=71.19 Aligned_cols=110 Identities=15% Similarity=0.186 Sum_probs=72.5
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh---HHHHHHH--------HhCC---CCCCCccEEEEe
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT---RVKQALQ--------WASP---SHSLSIPILTAD 75 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~---kl~~~~~--------~l~~---~~~~~~~~i~~D 75 (420)
...|+|||||||.|+-+++.|++..++- -++.+.-|... .-+++.+ .+.. ....++..+.+|
T Consensus 12 ~k~i~vTG~tGFlgKVliEklLr~~p~v----~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GD 87 (467)
T KOG1221|consen 12 NKTIFVTGATGFLGKVLIEKLLRTTPDV----KRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGD 87 (467)
T ss_pred CCeEEEEcccchhHHHHHHHHHhcCcCc----ceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccc
Confidence 3479999999999999999999987531 46777777431 1112221 1211 123567778888
Q ss_pred CCC------HHHHHHHHhccCeeEeccCCCCCC-------------cHHHHHHHHHcCC--cEEecCCc
Q 014694 76 TTD------PPSLHRLCSQTKLLLNCVGPYRLH-------------GDPVAAACVHSGC--DYLDISGE 123 (420)
Q Consensus 76 ~~d------~~sl~~~~~~~dvVIn~aGp~~~~-------------~~~vv~Ac~~~g~--~yvdisge 123 (420)
+.+ +.++..+.++.++|||+|+...+. ..++++.|++..- -++++|..
T Consensus 88 i~~~~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTA 156 (467)
T KOG1221|consen 88 ISEPDLGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTA 156 (467)
T ss_pred ccCcccCCChHHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehh
Confidence 874 356667889999999999975543 1666777766543 35665543
|
|
| >KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00021 Score=63.81 Aligned_cols=82 Identities=17% Similarity=0.144 Sum_probs=70.7
Q ss_pred CCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 014694 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 7 ~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
+.+...-+|+|+...+|+..++.|++.+ ..+++++--.+|-+++.++++ .++-+..+|++.+.++...+
T Consensus 6 s~kglvalvtggasglg~ataerlakqg-------asv~lldlp~skg~~vakelg----~~~vf~padvtsekdv~aal 74 (260)
T KOG1199|consen 6 STKGLVALVTGGASGLGKATAERLAKQG-------ASVALLDLPQSKGADVAKELG----GKVVFTPADVTSEKDVRAAL 74 (260)
T ss_pred hhcCeeEEeecCcccccHHHHHHHHhcC-------ceEEEEeCCcccchHHHHHhC----CceEEeccccCcHHHHHHHH
Confidence 3345567999999999999999999998 789999998899888999885 57888999999999988876
Q ss_pred h-------ccCeeEeccCCC
Q 014694 87 S-------QTKLLLNCVGPY 99 (420)
Q Consensus 87 ~-------~~dvVIn~aGp~ 99 (420)
. +.|+.+||+|..
T Consensus 75 a~ak~kfgrld~~vncagia 94 (260)
T KOG1199|consen 75 AKAKAKFGRLDALVNCAGIA 94 (260)
T ss_pred HHHHhhccceeeeeecccee
Confidence 5 579999999964
|
|
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00046 Score=65.24 Aligned_cols=98 Identities=22% Similarity=0.276 Sum_probs=73.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-Hhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~-~~~~ 89 (420)
|+++|.|+ |-+|..+|+.|.+.+ +.|+++++++++.++...+ ......+.+|.+|++.|+++ +.++
T Consensus 1 m~iiIiG~-G~vG~~va~~L~~~g-------~~Vv~Id~d~~~~~~~~~~-----~~~~~~v~gd~t~~~~L~~agi~~a 67 (225)
T COG0569 1 MKIIIIGA-GRVGRSVARELSEEG-------HNVVLIDRDEERVEEFLAD-----ELDTHVVIGDATDEDVLEEAGIDDA 67 (225)
T ss_pred CEEEEECC-cHHHHHHHHHHHhCC-------CceEEEEcCHHHHHHHhhh-----hcceEEEEecCCCHHHHHhcCCCcC
Confidence 57899987 889999999999998 7899999999998775441 12467899999999999999 8999
Q ss_pred CeeEeccCCCCCCcHHHHHHHHHcCCcEEecC
Q 014694 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdis 121 (420)
|++|-+.|-.........-|+.+.|++++-.-
T Consensus 68 D~vva~t~~d~~N~i~~~la~~~~gv~~viar 99 (225)
T COG0569 68 DAVVAATGNDEVNSVLALLALKEFGVPRVIAR 99 (225)
T ss_pred CEEEEeeCCCHHHHHHHHHHHHhcCCCcEEEE
Confidence 99998887432211222233444677655544
|
|
| >PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [] | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00098 Score=58.31 Aligned_cols=112 Identities=16% Similarity=0.150 Sum_probs=71.4
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~-~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
|+|.|+||+|.+|+.++..|...+- ..++.+.++++++++....++.. ............ .+ .+.++++
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l-----~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~-~~----~~~~~~a 70 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGL-----ADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS-GD----YEALKDA 70 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTT-----SSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE-SS----GGGGTTE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC-----CCceEEeccCcccceeeehhhhhhhhhccccccccc-cc----ccccccc
Confidence 5899999999999999999998863 15799999998888776666532 001112222222 33 3446789
Q ss_pred CeeEeccCCCCCCc--------------HHHHHHHHHcCC--cEEecCCcHHHHHHHHH
Q 014694 90 KLLLNCVGPYRLHG--------------DPVAAACVHSGC--DYLDISGEPEFMERMEA 132 (420)
Q Consensus 90 dvVIn~aGp~~~~~--------------~~vv~Ac~~~g~--~yvdisge~~~~~~~~~ 132 (420)
|+||.++|.....+ ..+.+...+.+- .++-+|.....+-.+..
T Consensus 71 Divvitag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivvtNPvd~~t~~~~ 129 (141)
T PF00056_consen 71 DIVVITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVVTNPVDVMTYVAQ 129 (141)
T ss_dssp SEEEETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-SSSHHHHHHHHH
T ss_pred cEEEEeccccccccccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEeCCcHHHHHHHHH
Confidence 99999999755433 334444444443 36666666665554443
|
L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C .... |
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00051 Score=68.34 Aligned_cols=96 Identities=22% Similarity=0.207 Sum_probs=66.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
.+|.|+||+|.+|+.++..|+..+. ..++.+.+++ +++....++.. ....+...+.+|+.++.+.++++|
T Consensus 9 ~KI~IiGaaG~VGs~~a~~l~~~~~-----~~elvL~Di~--~~~g~a~Dl~~---~~~~~~v~~~td~~~~~~~l~gaD 78 (321)
T PTZ00325 9 FKVAVLGAAGGIGQPLSLLLKQNPH-----VSELSLYDIV--GAPGVAADLSH---IDTPAKVTGYADGELWEKALRGAD 78 (321)
T ss_pred CEEEEECCCCHHHHHHHHHHhcCCC-----CCEEEEEecC--CCcccccchhh---cCcCceEEEecCCCchHHHhCCCC
Confidence 4899999999999999999886542 1578999983 32222222221 111344567777666788999999
Q ss_pred eeEeccCCCCCCc--------------HHHHHHHHHcCCc
Q 014694 91 LLLNCVGPYRLHG--------------DPVAAACVHSGCD 116 (420)
Q Consensus 91 vVIn~aGp~~~~~--------------~~vv~Ac~~~g~~ 116 (420)
+||+++|.-...+ .+++++..+++.+
T Consensus 79 vVVitaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~~~ 118 (321)
T PTZ00325 79 LVLICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSAPK 118 (321)
T ss_pred EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 9999999754422 5566777777774
|
|
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00038 Score=69.32 Aligned_cols=84 Identities=18% Similarity=0.079 Sum_probs=57.9
Q ss_pred CCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh
Q 014694 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 8 ~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
.++.+|+|+||+|.+|..++..|+.++- ..++.+.++++ .+....++. +....+...++.+.+++.+.++
T Consensus 16 ~~~~KV~IiGaaG~VG~~~a~~l~~~~~-----~~el~L~Di~~--~~g~a~Dl~---~~~~~~~i~~~~~~~d~~~~l~ 85 (323)
T PLN00106 16 APGFKVAVLGAAGGIGQPLSLLMKMNPL-----VSELHLYDIAN--TPGVAADVS---HINTPAQVRGFLGDDQLGDALK 85 (323)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCC-----CCEEEEEecCC--CCeeEchhh---hCCcCceEEEEeCCCCHHHHcC
Confidence 3456899999999999999999987652 14789999877 222122222 1112233445545566889999
Q ss_pred ccCeeEeccCCCCC
Q 014694 88 QTKLLLNCVGPYRL 101 (420)
Q Consensus 88 ~~dvVIn~aGp~~~ 101 (420)
++|+||+++|.-..
T Consensus 86 ~aDiVVitAG~~~~ 99 (323)
T PLN00106 86 GADLVIIPAGVPRK 99 (323)
T ss_pred CCCEEEEeCCCCCC
Confidence 99999999996443
|
|
| >PRK12549 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00059 Score=66.81 Aligned_cols=74 Identities=20% Similarity=0.185 Sum_probs=53.6
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
..+|+|+|+ |.+|+.++..|++.+- -++.+.+|+.+|.+.+.+.+.. ...... .... +++.+.++++
T Consensus 127 ~k~vlIlGa-GGaaraia~aL~~~G~------~~I~I~nR~~~ka~~la~~l~~-~~~~~~--~~~~---~~~~~~~~~a 193 (284)
T PRK12549 127 LERVVQLGA-GGAGAAVAHALLTLGV------ERLTIFDVDPARAAALADELNA-RFPAAR--ATAG---SDLAAALAAA 193 (284)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHcCC------CEEEEECCCHHHHHHHHHHHHh-hCCCeE--EEec---cchHhhhCCC
Confidence 357999997 7799999999998872 4799999999999988887641 011111 1222 2345567889
Q ss_pred CeeEecc
Q 014694 90 KLLLNCV 96 (420)
Q Consensus 90 dvVIn~a 96 (420)
|+||||.
T Consensus 194 DiVInaT 200 (284)
T PRK12549 194 DGLVHAT 200 (284)
T ss_pred CEEEECC
Confidence 9999994
|
|
| >COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0005 Score=68.03 Aligned_cols=106 Identities=19% Similarity=0.246 Sum_probs=68.4
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
.++|.|.||+||+|..+++.|+.|.. +++.++..++.+-+.+.+... ......-.....-|++.+ ...+|
T Consensus 2 ~~kV~IvGasGYtG~EL~rlL~~Hp~------ve~~~~ss~~~~g~~~~~~~p--~l~g~~~l~~~~~~~~~~--~~~~~ 71 (349)
T COG0002 2 MIKVGIVGASGYTGLELLRLLAGHPD------VELILISSRERAGKPVSDVHP--NLRGLVDLPFQTIDPEKI--ELDEC 71 (349)
T ss_pred CceEEEEcCCCCcHHHHHHHHhcCCC------eEEEEeechhhcCCchHHhCc--ccccccccccccCChhhh--hcccC
Confidence 46899999999999999999999863 676666554433222322221 001110022222233333 45679
Q ss_pred CeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHHH
Q 014694 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFM 127 (420)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~~ 127 (420)
|+||.|.- +.....++....+.|++.||+|++..+-
T Consensus 72 DvvFlalP--hg~s~~~v~~l~~~g~~VIDLSadfR~~ 107 (349)
T COG0002 72 DVVFLALP--HGVSAELVPELLEAGCKVIDLSADFRLK 107 (349)
T ss_pred CEEEEecC--chhHHHHHHHHHhCCCeEEECCcccccC
Confidence 99998873 2334778888888999999999988775
|
|
| >PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00081 Score=58.13 Aligned_cols=104 Identities=15% Similarity=0.287 Sum_probs=70.3
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC-------------------hhHHHHHHHHhCC-CCCCC
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASP-SHSLS 68 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs-------------------~~kl~~~~~~l~~-~~~~~ 68 (420)
|+.+|+|.|+ |.+|..+++.|++.|- -++.+++.+ ..|.+.+.+.+.. ....+
T Consensus 1 r~~~v~iiG~-G~vGs~va~~L~~~Gv------~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~ 73 (135)
T PF00899_consen 1 RNKRVLIIGA-GGVGSEVAKNLARSGV------GKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVE 73 (135)
T ss_dssp HT-EEEEEST-SHHHHHHHHHHHHHTT------SEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSE
T ss_pred CCCEEEEECc-CHHHHHHHHHHHHhCC------CceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCcee
Confidence 3568999997 7799999999999983 478887743 1233334333321 01223
Q ss_pred ccEEEEeCCCHHHHHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecC
Q 014694 69 IPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 69 ~~~i~~D~~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdis 121 (420)
+..+..++ +.+.+.++++++|+||.|...... ...+-+.|.+.+..+|+..
T Consensus 74 v~~~~~~~-~~~~~~~~~~~~d~vi~~~d~~~~-~~~l~~~~~~~~~p~i~~~ 124 (135)
T PF00899_consen 74 VEAIPEKI-DEENIEELLKDYDIVIDCVDSLAA-RLLLNEICREYGIPFIDAG 124 (135)
T ss_dssp EEEEESHC-SHHHHHHHHHTSSEEEEESSSHHH-HHHHHHHHHHTT-EEEEEE
T ss_pred eeeeeccc-ccccccccccCCCEEEEecCCHHH-HHHHHHHHHHcCCCEEEEE
Confidence 44444455 567788999999999999876432 3567789999999988865
|
Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A .... |
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0013 Score=66.62 Aligned_cols=80 Identities=13% Similarity=0.017 Sum_probs=58.3
Q ss_pred CCcceEEEEcCCcHHHHH--HHHHHHHhCCCCCCCcceEEEEecChhH---------------HHHHHHHhCCCCCCCcc
Q 014694 8 PELFDVIILGASGFTGKY--VVREALKLFNFPSSPIKSLALAGRNPTR---------------VKQALQWASPSHSLSIP 70 (420)
Q Consensus 8 ~~~~~IvV~GATG~~G~~--va~~L~~~~~~~~~~~~~v~iagRs~~k---------------l~~~~~~l~~~~~~~~~ 70 (420)
.....+||+|+++.+|.. +++.| +.| .++++.++..++ .++.+++. ...+.
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~G-------A~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~----G~~a~ 106 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAG-------ADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAA----GLYAK 106 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcC-------CeEEEEecCcchhhhcccccccchHHHHHHHHHhc----CCceE
Confidence 344589999999999999 89999 877 677777753321 22222222 23456
Q ss_pred EEEEeCCCHHHHHHHHh-------ccCeeEeccCCC
Q 014694 71 ILTADTTDPPSLHRLCS-------QTKLLLNCVGPY 99 (420)
Q Consensus 71 ~i~~D~~d~~sl~~~~~-------~~dvVIn~aGp~ 99 (420)
.+.+|++++++++++++ +.|+|||++|..
T Consensus 107 ~i~~DVss~E~v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 107 SINGDAFSDEIKQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred EEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCccC
Confidence 78999999999888876 479999999954
|
|
| >COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0016 Score=66.37 Aligned_cols=94 Identities=15% Similarity=0.200 Sum_probs=73.3
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
..+++|+|| |=+|..++++|++++. .++.++.|+.++.+++.++++ +++...+.+...+..+
T Consensus 178 ~~~vlvIGA-Gem~~lva~~L~~~g~------~~i~IaNRT~erA~~La~~~~-----------~~~~~l~el~~~l~~~ 239 (414)
T COG0373 178 DKKVLVIGA-GEMGELVAKHLAEKGV------KKITIANRTLERAEELAKKLG-----------AEAVALEELLEALAEA 239 (414)
T ss_pred cCeEEEEcc-cHHHHHHHHHHHhCCC------CEEEEEcCCHHHHHHHHHHhC-----------CeeecHHHHHHhhhhC
Confidence 447999998 8899999999999983 689999999999999998773 3444567788999999
Q ss_pred CeeEeccCCC-CCCcHHHHHHHHHcCCc--EEecC
Q 014694 90 KLLLNCVGPY-RLHGDPVAAACVHSGCD--YLDIS 121 (420)
Q Consensus 90 dvVIn~aGp~-~~~~~~vv~Ac~~~g~~--yvdis 121 (420)
|+||++.|-. .......++.+.+..-+ +||++
T Consensus 240 DvVissTsa~~~ii~~~~ve~a~~~r~~~livDia 274 (414)
T COG0373 240 DVVISSTSAPHPIITREMVERALKIRKRLLIVDIA 274 (414)
T ss_pred CEEEEecCCCccccCHHHHHHHHhcccCeEEEEec
Confidence 9999887743 33455666666665544 67773
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.00061 Score=83.54 Aligned_cols=84 Identities=20% Similarity=0.133 Sum_probs=61.9
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh--------------h-----------------------
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--------------T----------------------- 52 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~--------------~----------------------- 52 (420)
...+||+||++.||..++++|++++. .++++.+|+. .
T Consensus 1997 g~vvLVTGGarGIG~aiA~~LA~~~g------a~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~ 2070 (2582)
T TIGR02813 1997 DDVFLVTGGAKGVTFECALELAKQCQ------AHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVD 2070 (2582)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHhcC------CEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhh
Confidence 34799999999999999999999852 7899999982 0
Q ss_pred ----------HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh------ccCeeEeccCCCC
Q 014694 53 ----------RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS------QTKLLLNCVGPYR 100 (420)
Q Consensus 53 ----------kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~------~~dvVIn~aGp~~ 100 (420)
.+++.++.+.. .+.++.++.+|++|.+++.++++ +.|+|||+||...
T Consensus 2071 ~~~~~~~~~~ei~~~la~l~~-~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~ 2133 (2582)
T TIGR02813 2071 ALVRPVLSSLEIAQALAAFKA-AGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLA 2133 (2582)
T ss_pred hcccccchhHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCC
Confidence 11111222211 13456788999999999998876 3699999999653
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.002 Score=63.93 Aligned_cols=97 Identities=15% Similarity=0.091 Sum_probs=59.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
|+|+|+||||.+|+.++..|...... ...+.+.+|++.. +...-++. .......+.+ .+.+++.+.++++|
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~----~~el~L~d~~~~~-~g~alDl~--~~~~~~~i~~--~~~~d~~~~l~~~D 71 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPA----GSELSLYDIAPVT-PGVAVDLS--HIPTAVKIKG--FSGEDPTPALEGAD 71 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCC----ccEEEEEecCCCC-cceehhhh--cCCCCceEEE--eCCCCHHHHcCCCC
Confidence 58999999999999999988653311 1578888887532 11111221 1111223333 22345667778999
Q ss_pred eeEeccCCCCCCc--------------HHHHHHHHHcCCc
Q 014694 91 LLLNCVGPYRLHG--------------DPVAAACVHSGCD 116 (420)
Q Consensus 91 vVIn~aGp~~~~~--------------~~vv~Ac~~~g~~ 116 (420)
+||.|+|.-+..+ ..++++..+.+.+
T Consensus 72 iVIitaG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~~~ 111 (312)
T PRK05086 72 VVLISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKTCPK 111 (312)
T ss_pred EEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999755432 4455666666653
|
|
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0013 Score=64.16 Aligned_cols=106 Identities=17% Similarity=0.171 Sum_probs=68.6
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
..+++|+|+ |.+|+.++..|...+. .+|.+.+|+.++.+++.+++.. ...+. .+. ++.+.+.++
T Consensus 123 ~k~vlVlGa-Gg~a~ai~~aL~~~g~------~~V~v~~R~~~~a~~l~~~~~~--~~~~~---~~~----~~~~~~~~~ 186 (278)
T PRK00258 123 GKRILILGA-GGAARAVILPLLDLGV------AEITIVNRTVERAEELAKLFGA--LGKAE---LDL----ELQEELADF 186 (278)
T ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCC------CEEEEEeCCHHHHHHHHHHhhh--cccee---ecc----cchhccccC
Confidence 347999997 9999999999998872 5899999999999888877641 11111 111 234566789
Q ss_pred CeeEeccCCCCCC---cHHHHHHHHHcCCcEEecCC---cHHHHHHHH
Q 014694 90 KLLLNCVGPYRLH---GDPVAAACVHSGCDYLDISG---EPEFMERME 131 (420)
Q Consensus 90 dvVIn~aGp~~~~---~~~vv~Ac~~~g~~yvdisg---e~~~~~~~~ 131 (420)
|+||||...-... ..++...+...+...+|+.- +.+|++...
T Consensus 187 DivInaTp~g~~~~~~~~~~~~~~l~~~~~v~DivY~P~~T~ll~~A~ 234 (278)
T PRK00258 187 DLIINATSAGMSGELPLPPLPLSLLRPGTIVYDMIYGPLPTPFLAWAK 234 (278)
T ss_pred CEEEECCcCCCCCCCCCCCCCHHHcCCCCEEEEeecCCCCCHHHHHHH
Confidence 9999998533211 11333345555566667653 445555443
|
|
| >PLN02383 aspartate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0012 Score=66.26 Aligned_cols=99 Identities=14% Similarity=0.055 Sum_probs=63.5
Q ss_pred CCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEE--ecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 014694 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA--GRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 8 ~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~ia--gRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~ 85 (420)
.++++|.|+||||++|+.+++.|.+++.+. .++..+ .|+..+.... .......-++ +++ .
T Consensus 5 ~~~~kVaVvGAtG~vG~eLlrlL~~~~hP~----~~l~~las~rsaGk~~~~---------~~~~~~v~~~-~~~----~ 66 (344)
T PLN02383 5 ENGPSVAIVGVTGAVGQEFLSVLTDRDFPY----SSLKMLASARSAGKKVTF---------EGRDYTVEEL-TED----S 66 (344)
T ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCCc----ceEEEEEccCCCCCeeee---------cCceeEEEeC-CHH----H
Confidence 456899999999999999999998854211 344322 2333332111 1122333333 222 2
Q ss_pred HhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHH
Q 014694 86 CSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEF 126 (420)
Q Consensus 86 ~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~ 126 (420)
++++|+||.|++-- ....++..+.+.|+..||+|+...+
T Consensus 67 ~~~~D~vf~a~p~~--~s~~~~~~~~~~g~~VIDlS~~fR~ 105 (344)
T PLN02383 67 FDGVDIALFSAGGS--ISKKFGPIAVDKGAVVVDNSSAFRM 105 (344)
T ss_pred HcCCCEEEECCCcH--HHHHHHHHHHhCCCEEEECCchhhc
Confidence 46899999888642 3467777777899999999988744
|
|
| >PRK06732 phosphopantothenate--cysteine ligase; Validated | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.00074 Score=64.00 Aligned_cols=73 Identities=15% Similarity=0.171 Sum_probs=49.6
Q ss_pred EEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCC--HHHHHHHHhccC
Q 014694 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTD--PPSLHRLCSQTK 90 (420)
Q Consensus 13 IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d--~~sl~~~~~~~d 90 (420)
.+=-.+|||+|++++++|+++| ++|.++.|+.... .. ...++.++.++..+ .+.+.+.++++|
T Consensus 19 ~itN~SSG~iG~aLA~~L~~~G-------~~V~li~r~~~~~-----~~---~~~~v~~i~v~s~~~m~~~l~~~~~~~D 83 (229)
T PRK06732 19 GITNHSTGQLGKIIAETFLAAG-------HEVTLVTTKTAVK-----PE---PHPNLSIIEIENVDDLLETLEPLVKDHD 83 (229)
T ss_pred eecCccchHHHHHHHHHHHhCC-------CEEEEEECccccc-----CC---CCCCeEEEEEecHHHHHHHHHHHhcCCC
Confidence 3333578999999999999998 7898888764211 00 11245556554332 245666777899
Q ss_pred eeEeccCCCC
Q 014694 91 LLLNCVGPYR 100 (420)
Q Consensus 91 vVIn~aGp~~ 100 (420)
+|||+||...
T Consensus 84 ivIh~AAvsd 93 (229)
T PRK06732 84 VLIHSMAVSD 93 (229)
T ss_pred EEEeCCccCC
Confidence 9999999753
|
|
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0016 Score=60.57 Aligned_cols=103 Identities=19% Similarity=0.251 Sum_probs=70.6
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC-------------------hhHHHHHHHHhCCCCCCCc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASPSHSLSI 69 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs-------------------~~kl~~~~~~l~~~~~~~~ 69 (420)
++.+|+|+|+ |.+|..+++.|++.|- -++.+++++ ..|.+.+.+.+.. ..+.+
T Consensus 20 ~~~~VlviG~-GglGs~ia~~La~~Gv------~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~-~np~v 91 (202)
T TIGR02356 20 LNSHVLIIGA-GGLGSPAALYLAGAGV------GTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRE-LNSDI 91 (202)
T ss_pred cCCCEEEECC-CHHHHHHHHHHHHcCC------CeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHH-hCCCC
Confidence 3457999986 7799999999999983 478888876 2344444444432 11233
Q ss_pred cE--EEEeCCCHHHHHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecC
Q 014694 70 PI--LTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 70 ~~--i~~D~~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdis 121 (420)
++ +..++ +.+.+.+.++++|+||.|...+. ....+-+.|.+.++.+|+..
T Consensus 92 ~i~~~~~~i-~~~~~~~~~~~~D~Vi~~~d~~~-~r~~l~~~~~~~~ip~i~~~ 143 (202)
T TIGR02356 92 QVTALKERV-TAENLELLINNVDLVLDCTDNFA-TRYLINDACVALGTPLISAA 143 (202)
T ss_pred EEEEehhcC-CHHHHHHHHhCCCEEEECCCCHH-HHHHHHHHHHHcCCCEEEEE
Confidence 33 33333 44678888999999999986542 22456788999998888764
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.00069 Score=67.98 Aligned_cols=97 Identities=14% Similarity=0.134 Sum_probs=65.3
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccCe
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKL 91 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~dv 91 (420)
+|.|+||||++|+.+++.|.+++-+ ..++..+.++.+..+.+. + ...+....|++ . ..++++|+
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp----~~~l~~~as~~~~g~~~~--~-----~~~~~~~~~~~-~----~~~~~~D~ 64 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFP----IDKLVLLASDRSAGRKVT--F-----KGKELEVNEAK-I----ESFEGIDI 64 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCC----hhhEEEEeccccCCCeee--e-----CCeeEEEEeCC-h----HHhcCCCE
Confidence 4889999999999999999886421 245555555543322211 1 12345566663 1 23478999
Q ss_pred eEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHH
Q 014694 92 LLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEF 126 (420)
Q Consensus 92 VIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~ 126 (420)
||-|+|.. ....++....+.|+..||+|+...+
T Consensus 65 v~~a~g~~--~s~~~a~~~~~~G~~VID~ss~~R~ 97 (339)
T TIGR01296 65 ALFSAGGS--VSKEFAPKAAKCGAIVIDNTSAFRM 97 (339)
T ss_pred EEECCCHH--HHHHHHHHHHHCCCEEEECCHHHhC
Confidence 99999864 3467777778889999999987643
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978. |
| >PRK14027 quinate/shikimate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0031 Score=61.71 Aligned_cols=77 Identities=16% Similarity=0.175 Sum_probs=54.1
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
..+++|+|| |..++.++-.|++.+. .++.+..|+.++.+++.+.+.. ......+. ..+..++.+....+
T Consensus 127 ~k~vlilGa-GGaarAi~~aL~~~g~------~~i~i~nR~~~ka~~La~~~~~--~~~~~~~~--~~~~~~~~~~~~~~ 195 (283)
T PRK14027 127 LDSVVQVGA-GGVGNAVAYALVTHGV------QKLQVADLDTSRAQALADVINN--AVGREAVV--GVDARGIEDVIAAA 195 (283)
T ss_pred CCeEEEECC-cHHHHHHHHHHHHCCC------CEEEEEcCCHHHHHHHHHHHhh--ccCcceEE--ecCHhHHHHHHhhc
Confidence 347999998 8899999999998872 4799999999999988877631 11111111 12233344455779
Q ss_pred CeeEeccC
Q 014694 90 KLLLNCVG 97 (420)
Q Consensus 90 dvVIn~aG 97 (420)
|+|||+.-
T Consensus 196 divINaTp 203 (283)
T PRK14027 196 DGVVNATP 203 (283)
T ss_pred CEEEEcCC
Confidence 99999974
|
|
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0032 Score=61.52 Aligned_cols=107 Identities=15% Similarity=0.082 Sum_probs=82.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
.-|+|||.-...|+.+|++|.+.| ++|.++.-+++..+.+..+.. .++...+..|++++++++++.+
T Consensus 30 k~VlITGCDSGfG~~LA~~L~~~G-------f~V~Agcl~~~gae~L~~~~~---s~rl~t~~LDVT~~esi~~a~~~V~ 99 (322)
T KOG1610|consen 30 KAVLITGCDSGFGRLLAKKLDKKG-------FRVFAGCLTEEGAESLRGETK---SPRLRTLQLDVTKPESVKEAAQWVK 99 (322)
T ss_pred cEEEEecCCcHHHHHHHHHHHhcC-------CEEEEEeecCchHHHHhhhhc---CCcceeEeeccCCHHHHHHHHHHHH
Confidence 359999999999999999999998 899888888887777766552 4677888999999999999886
Q ss_pred ------ccCeeEeccCCCCCCc------HHHHHHHHHcCCcEEecCCcHHHHHHHHH
Q 014694 88 ------QTKLLLNCVGPYRLHG------DPVAAACVHSGCDYLDISGEPEFMERMEA 132 (420)
Q Consensus 88 ------~~dvVIn~aGp~~~~~------~~vv~Ac~~~g~~yvdisge~~~~~~~~~ 132 (420)
+--.|||+||.....| ..-.+.|.+ |++=|.....+.++.
T Consensus 100 ~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~-----vNllG~irvT~~~lp 151 (322)
T KOG1610|consen 100 KHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLN-----VNLLGTIRVTKAFLP 151 (322)
T ss_pred HhcccccceeEEeccccccccCccccccHHHHHHHHh-----hhhhhHHHHHHHHHH
Confidence 2457999999654433 444555554 345577777777766
|
|
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0028 Score=64.41 Aligned_cols=97 Identities=20% Similarity=0.222 Sum_probs=70.0
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
++.+|+|+|+ |-+|+.+++.+.+.+ .+|.+.+|+.++++.+...++ ..+..+..+.+.+.+.+++
T Consensus 166 ~~~~VlViGa-G~vG~~aa~~a~~lG-------a~V~v~d~~~~~~~~l~~~~g-------~~v~~~~~~~~~l~~~l~~ 230 (370)
T TIGR00518 166 EPGDVTIIGG-GVVGTNAAKMANGLG-------ATVTILDINIDRLRQLDAEFG-------GRIHTRYSNAYEIEDAVKR 230 (370)
T ss_pred CCceEEEEcC-CHHHHHHHHHHHHCC-------CeEEEEECCHHHHHHHHHhcC-------ceeEeccCCHHHHHHHHcc
Confidence 3457999987 899999999999887 689999999998877665543 1233456678889999999
Q ss_pred cCeeEeccCCCC-----CCcHHHHHHHHHcCCcEEecC
Q 014694 89 TKLLLNCVGPYR-----LHGDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 89 ~dvVIn~aGp~~-----~~~~~vv~Ac~~~g~~yvdis 121 (420)
+|+||+|++... ......++. .+.+...+|++
T Consensus 231 aDvVI~a~~~~g~~~p~lit~~~l~~-mk~g~vIvDva 267 (370)
T TIGR00518 231 ADLLIGAVLIPGAKAPKLVSNSLVAQ-MKPGAVIVDVA 267 (370)
T ss_pred CCEEEEccccCCCCCCcCcCHHHHhc-CCCCCEEEEEe
Confidence 999999984311 112444433 24455677776
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0012 Score=66.41 Aligned_cols=105 Identities=13% Similarity=0.135 Sum_probs=65.4
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHh-CCC----CCCCccEEEEeCCCHHHHHH
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWA-SPS----HSLSIPILTADTTDPPSLHR 84 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l-~~~----~~~~~~~i~~D~~d~~sl~~ 84 (420)
+++|.|+||||++|+.+++.|.++.. .++..+.++.++..+....+ ... ......-+.+...+++.+
T Consensus 3 ~~~V~I~GatG~iG~~l~~~L~~~p~------~el~~~~~s~~~~G~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-- 74 (349)
T PRK08664 3 KLKVGILGATGMVGQRFVQLLANHPW------FEVTALAASERSAGKTYGEAVRWQLDGPIPEEVADMEVVSTDPEAV-- 74 (349)
T ss_pred CcEEEEECCCCHHHHHHHHHHHcCCC------ceEEEEEcChhhcCCcccccccccccccccccccceEEEeCCHHHh--
Confidence 47899999999999999999987642 67777656554332211111 000 000011122222344432
Q ss_pred HHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHH
Q 014694 85 LCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEF 126 (420)
Q Consensus 85 ~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~ 126 (420)
.++|+|+-+.+.. ....+++++.+.|+..||+|++...
T Consensus 75 --~~~DvVf~a~p~~--~s~~~~~~~~~~G~~vIDls~~fR~ 112 (349)
T PRK08664 75 --DDVDIVFSALPSD--VAGEVEEEFAKAGKPVFSNASAHRM 112 (349)
T ss_pred --cCCCEEEEeCChh--HHHHHHHHHHHCCCEEEECCchhcC
Confidence 5899998876542 3467778888999999999987533
|
|
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.002 Score=64.58 Aligned_cols=103 Identities=16% Similarity=0.209 Sum_probs=71.4
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh---------------------hHHHHHHHHhCC-CCCC
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP---------------------TRVKQALQWASP-SHSL 67 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~---------------------~kl~~~~~~l~~-~~~~ 67 (420)
..+|+|+|+ |.+|..++++|++.|- -++.+++++. .|.+.+.+.+.. ...-
T Consensus 24 ~~~VlVvG~-GglGs~va~~La~aGv------g~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v 96 (339)
T PRK07688 24 EKHVLIIGA-GALGTANAEMLVRAGV------GKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDV 96 (339)
T ss_pred CCcEEEECC-CHHHHHHHHHHHHcCC------CeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCc
Confidence 357999998 8899999999999983 4788888762 233333333321 0112
Q ss_pred CccEEEEeCCCHHHHHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecC
Q 014694 68 SIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 68 ~~~~i~~D~~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdis 121 (420)
++..+..+++ ++.+.++++++|+||.|..-+. ....+-++|.+.++.+|..+
T Consensus 97 ~v~~~~~~~~-~~~~~~~~~~~DlVid~~Dn~~-~r~~ln~~~~~~~iP~i~~~ 148 (339)
T PRK07688 97 RVEAIVQDVT-AEELEELVTGVDLIIDATDNFE-TRFIVNDAAQKYGIPWIYGA 148 (339)
T ss_pred EEEEEeccCC-HHHHHHHHcCCCEEEEcCCCHH-HHHHHHHHHHHhCCCEEEEe
Confidence 3344445654 5678888999999999987543 23457789999999887754
|
|
| >PRK12749 quinate/shikimate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0043 Score=60.83 Aligned_cols=79 Identities=15% Similarity=0.129 Sum_probs=54.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh---hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP---TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~---~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
.+++|+|| |..++.++-.|+..+. .++.+..|+. +|.+++.+.+.. .....+...+..+.+.+.+.+.
T Consensus 125 k~vlvlGa-GGaarAi~~~l~~~g~------~~i~i~nRt~~~~~ka~~la~~~~~--~~~~~~~~~~~~~~~~l~~~~~ 195 (288)
T PRK12749 125 KTMVLLGA-GGASTAIGAQGAIEGL------KEIKLFNRRDEFFDKALAFAQRVNE--NTDCVVTVTDLADQQAFAEALA 195 (288)
T ss_pred CEEEEECC-cHHHHHHHHHHHHCCC------CEEEEEeCCccHHHHHHHHHHHhhh--ccCceEEEechhhhhhhhhhcc
Confidence 47999997 7789999999988772 5899999994 588788776641 1111122233333334555677
Q ss_pred ccCeeEeccCC
Q 014694 88 QTKLLLNCVGP 98 (420)
Q Consensus 88 ~~dvVIn~aGp 98 (420)
++|+||||.-.
T Consensus 196 ~aDivINaTp~ 206 (288)
T PRK12749 196 SADILTNGTKV 206 (288)
T ss_pred cCCEEEECCCC
Confidence 89999998743
|
|
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0011 Score=59.43 Aligned_cols=80 Identities=20% Similarity=0.131 Sum_probs=67.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~-- 88 (420)
..|+++||.-.||+.+++.|++.| .+|+...|+++.|..+.++- ..-+.-+++|+.+.+.+.+.+..
T Consensus 8 ~~vlvTgagaGIG~~~v~~La~aG-------A~ViAvaR~~a~L~sLV~e~----p~~I~Pi~~Dls~wea~~~~l~~v~ 76 (245)
T KOG1207|consen 8 VIVLVTGAGAGIGKEIVLSLAKAG-------AQVIAVARNEANLLSLVKET----PSLIIPIVGDLSAWEALFKLLVPVF 76 (245)
T ss_pred eEEEeecccccccHHHHHHHHhcC-------CEEEEEecCHHHHHHHHhhC----CcceeeeEecccHHHHHHHhhcccC
Confidence 468999999999999999999998 79999999999999888754 23467788999998888888764
Q ss_pred -cCeeEeccCCCCC
Q 014694 89 -TKLLLNCVGPYRL 101 (420)
Q Consensus 89 -~dvVIn~aGp~~~ 101 (420)
.|.++|+||....
T Consensus 77 pidgLVNNAgvA~~ 90 (245)
T KOG1207|consen 77 PIDGLVNNAGVATN 90 (245)
T ss_pred chhhhhccchhhhc
Confidence 5899999996543
|
|
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0022 Score=64.40 Aligned_cols=102 Identities=16% Similarity=0.175 Sum_probs=71.5
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh---------------------hHHHHHHHHhCC-CCCC
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP---------------------TRVKQALQWASP-SHSL 67 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~---------------------~kl~~~~~~l~~-~~~~ 67 (420)
..+|+|+|+ |.+|..++++|++.|- -++.+++++. .|.+.+.+.+.. ....
T Consensus 24 ~~~VlIiG~-GglGs~va~~La~aGv------g~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v 96 (338)
T PRK12475 24 EKHVLIVGA-GALGAANAEALVRAGI------GKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEV 96 (338)
T ss_pred CCcEEEECC-CHHHHHHHHHHHHcCC------CEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCc
Confidence 457999997 6799999999999983 4788888863 244444444432 0122
Q ss_pred CccEEEEeCCCHHHHHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEec
Q 014694 68 SIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDI 120 (420)
Q Consensus 68 ~~~~i~~D~~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdi 120 (420)
++..+..|++ .+.++++++++|+||.|...+.. ...+-++|.+.++.+|..
T Consensus 97 ~i~~~~~~~~-~~~~~~~~~~~DlVid~~D~~~~-r~~in~~~~~~~ip~i~~ 147 (338)
T PRK12475 97 EIVPVVTDVT-VEELEELVKEVDLIIDATDNFDT-RLLINDLSQKYNIPWIYG 147 (338)
T ss_pred EEEEEeccCC-HHHHHHHhcCCCEEEEcCCCHHH-HHHHHHHHHHcCCCEEEE
Confidence 3444555664 46788899999999999976532 244668999999987765
|
|
| >TIGR00507 aroE shikimate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0028 Score=61.47 Aligned_cols=98 Identities=19% Similarity=0.182 Sum_probs=63.8
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
..+++|+|+ |.+|+.++..|++.+ .++.+.+|+.++.+++.+++.. ... ....+..+ ....++
T Consensus 117 ~k~vliiGa-Gg~g~aia~~L~~~g-------~~v~v~~R~~~~~~~la~~~~~--~~~--~~~~~~~~-----~~~~~~ 179 (270)
T TIGR00507 117 NQRVLIIGA-GGAARAVALPLLKAD-------CNVIIANRTVSKAEELAERFQR--YGE--IQAFSMDE-----LPLHRV 179 (270)
T ss_pred CCEEEEEcC-cHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHhh--cCc--eEEechhh-----hcccCc
Confidence 347999998 799999999999876 6899999999999888877641 111 12222211 123579
Q ss_pred CeeEeccCCCCCC---cHHHHHHHHHcCCcEEecCCcH
Q 014694 90 KLLLNCVGPYRLH---GDPVAAACVHSGCDYLDISGEP 124 (420)
Q Consensus 90 dvVIn~aGp~~~~---~~~vv~Ac~~~g~~yvdisge~ 124 (420)
|+||||.+..... ..++.......+...+|++-.+
T Consensus 180 DivInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y~p 217 (270)
T TIGR00507 180 DLIINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVYNP 217 (270)
T ss_pred cEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEeccCC
Confidence 9999999753211 1122233445566678876443
|
This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain. |
| >TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0027 Score=62.04 Aligned_cols=77 Identities=17% Similarity=0.180 Sum_probs=55.7
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
..+++|+|| |.+|+.++..|++.+. -++.++.|+.++.+++.+++.. ...+.. +...+++...+.++
T Consensus 125 ~k~vlvlGa-GGaarai~~aL~~~G~------~~i~I~nRt~~ka~~La~~~~~----~~~~~~--~~~~~~~~~~~~~~ 191 (282)
T TIGR01809 125 GFRGLVIGA-GGTSRAAVYALASLGV------TDITVINRNPDKLSRLVDLGVQ----VGVITR--LEGDSGGLAIEKAA 191 (282)
T ss_pred CceEEEEcC-cHHHHHHHHHHHHcCC------CeEEEEeCCHHHHHHHHHHhhh----cCccee--ccchhhhhhcccCC
Confidence 457999987 8899999999999872 4799999999999998887641 111111 22223445566789
Q ss_pred CeeEeccCCC
Q 014694 90 KLLLNCVGPY 99 (420)
Q Consensus 90 dvVIn~aGp~ 99 (420)
|+||||...-
T Consensus 192 DiVInaTp~g 201 (282)
T TIGR01809 192 EVLVSTVPAD 201 (282)
T ss_pred CEEEECCCCC
Confidence 9999998643
|
This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway. |
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0022 Score=66.58 Aligned_cols=91 Identities=13% Similarity=0.229 Sum_probs=70.4
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-Hhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~-~~~~ 89 (420)
|+|+|+|+ |.+|+.+++.|.+.+ .++.+.+|++++++.+.+.. ++.++.+|.++++.++++ +.++
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g-------~~v~vid~~~~~~~~~~~~~------~~~~~~gd~~~~~~l~~~~~~~a 66 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGEN-------NDVTVIDTDEERLRRLQDRL------DVRTVVGNGSSPDVLREAGAEDA 66 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCC-------CcEEEEECCHHHHHHHHhhc------CEEEEEeCCCCHHHHHHcCCCcC
Confidence 57999998 999999999999877 78999999999887665422 467889999999999998 8899
Q ss_pred CeeEeccCCCCCCcHHHHHHHHHc-CCc
Q 014694 90 KLLLNCVGPYRLHGDPVAAACVHS-GCD 116 (420)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~Ac~~~-g~~ 116 (420)
|.||.+..-.. ....+...|.+. +..
T Consensus 67 ~~vi~~~~~~~-~n~~~~~~~r~~~~~~ 93 (453)
T PRK09496 67 DLLIAVTDSDE-TNMVACQIAKSLFGAP 93 (453)
T ss_pred CEEEEecCChH-HHHHHHHHHHHhcCCC
Confidence 99998875322 223344556654 553
|
|
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0024 Score=66.30 Aligned_cols=92 Identities=17% Similarity=0.240 Sum_probs=67.7
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh-hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~-~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
..+|+|+|+++ +|..+++.|++.| ++|.+.+++. +.+++..+++. ..++.++..|..+ +...+
T Consensus 5 ~k~v~iiG~g~-~G~~~A~~l~~~G-------~~V~~~d~~~~~~~~~~~~~l~---~~~~~~~~~~~~~-----~~~~~ 68 (450)
T PRK14106 5 GKKVLVVGAGV-SGLALAKFLKKLG-------AKVILTDEKEEDQLKEALEELG---ELGIELVLGEYPE-----EFLEG 68 (450)
T ss_pred CCEEEEECCCH-HHHHHHHHHHHCC-------CEEEEEeCCchHHHHHHHHHHH---hcCCEEEeCCcch-----hHhhc
Confidence 45799999877 9999999999998 8999999975 44544445442 1245677777655 34567
Q ss_pred cCeeEeccCCCCCCcHHHHHHHHHcCCcEEe
Q 014694 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLD 119 (420)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvd 119 (420)
+|+||+++|.. ...+++.+|.+.|+..+.
T Consensus 69 ~d~vv~~~g~~--~~~~~~~~a~~~~i~~~~ 97 (450)
T PRK14106 69 VDLVVVSPGVP--LDSPPVVQAHKKGIEVIG 97 (450)
T ss_pred CCEEEECCCCC--CCCHHHHHHHHCCCcEEe
Confidence 99999999864 346788888887775543
|
|
| >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0033 Score=62.31 Aligned_cols=93 Identities=13% Similarity=0.172 Sum_probs=66.1
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
...+|+|+|+ |-+|+.++++|...+. .+|.+.+|+.++.+++.++++ .. +.+.+++.+.+.+
T Consensus 177 ~~~~V~ViGa-G~iG~~~a~~L~~~g~------~~V~v~~r~~~ra~~la~~~g------~~-----~~~~~~~~~~l~~ 238 (311)
T cd05213 177 KGKKVLVIGA-GEMGELAAKHLAAKGV------AEITIANRTYERAEELAKELG------GN-----AVPLDELLELLNE 238 (311)
T ss_pred cCCEEEEECc-HHHHHHHHHHHHHcCC------CEEEEEeCCHHHHHHHHHHcC------Ce-----EEeHHHHHHHHhc
Confidence 3568999997 9999999999988652 579999999999888888764 11 1233567788889
Q ss_pred cCeeEeccCCCCCCcHHHHHHHHHc----CCcEEecC
Q 014694 89 TKLLLNCVGPYRLHGDPVAAACVHS----GCDYLDIS 121 (420)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~Ac~~~----g~~yvdis 121 (420)
+|+||.|.+.... ..+++...+. +.-.+|++
T Consensus 239 aDvVi~at~~~~~--~~~~~~~~~~~~~~~~~viDla 273 (311)
T cd05213 239 ADVVISATGAPHY--AKIVERAMKKRSGKPRLIVDLA 273 (311)
T ss_pred CCEEEECCCCCch--HHHHHHHHhhCCCCCeEEEEeC
Confidence 9999999986543 3333333222 23467774
|
Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, |
| >KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0014 Score=58.97 Aligned_cols=99 Identities=18% Similarity=0.188 Sum_probs=71.6
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
.+..+|+||||-+|+-+++++++... + .+|.++.|.+-- +.. ....+.....|.+.-+.+...+.+.
T Consensus 18 ~~s~fvlGAtG~~G~~llk~~~E~~~--F---SKV~~i~RR~~~-----d~a---t~k~v~q~~vDf~Kl~~~a~~~qg~ 84 (238)
T KOG4039|consen 18 NMSGFVLGATGLCGGGLLKHAQEAPQ--F---SKVYAILRRELP-----DPA---TDKVVAQVEVDFSKLSQLATNEQGP 84 (238)
T ss_pred ccceEEEeccccccHHHHHHHHhccc--c---eeEEEEEeccCC-----Ccc---ccceeeeEEechHHHHHHHhhhcCC
Confidence 35799999999999999999998762 2 578888886311 000 1234566777887777777788899
Q ss_pred CeeEeccCCCCC-------------CcHHHHHHHHHcCC-cEEecC
Q 014694 90 KLLLNCVGPYRL-------------HGDPVAAACVHSGC-DYLDIS 121 (420)
Q Consensus 90 dvVIn~aGp~~~-------------~~~~vv~Ac~~~g~-~yvdis 121 (420)
||.+.|.|...- |-....+++++.|+ |++-+|
T Consensus 85 dV~FcaLgTTRgkaGadgfykvDhDyvl~~A~~AKe~Gck~fvLvS 130 (238)
T KOG4039|consen 85 DVLFCALGTTRGKAGADGFYKVDHDYVLQLAQAAKEKGCKTFVLVS 130 (238)
T ss_pred ceEEEeecccccccccCceEeechHHHHHHHHHHHhCCCeEEEEEe
Confidence 999999986542 22667788889998 455554
|
|
| >cd00704 MDH Malate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0037 Score=62.34 Aligned_cols=88 Identities=14% Similarity=-0.002 Sum_probs=53.4
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh--hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~--~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
.+|.|+||+|.+|+.++..|+..+-........+.+.++++ ++++....++.......... ..+. ....+.+++
T Consensus 1 ~KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~~~~~~--~~i~--~~~~~~~~~ 76 (323)
T cd00704 1 LHVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLLKG--VVIT--TDPEEAFKD 76 (323)
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhcccccCC--cEEe--cChHHHhCC
Confidence 37999999999999999998876521100113689999987 55433332222100000000 0111 235688899
Q ss_pred cCeeEeccCCCCCC
Q 014694 89 TKLLLNCVGPYRLH 102 (420)
Q Consensus 89 ~dvVIn~aGp~~~~ 102 (420)
+|+||++||.-...
T Consensus 77 aDiVVitAG~~~~~ 90 (323)
T cd00704 77 VDVAILVGAFPRKP 90 (323)
T ss_pred CCEEEEeCCCCCCc
Confidence 99999999965443
|
Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0033 Score=61.37 Aligned_cols=109 Identities=24% Similarity=0.249 Sum_probs=68.1
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
..+++|+|| |..++.++..|++.+. .++.|+.|+.++.+++.+.+.. ....+...+..+.+.+. ++
T Consensus 126 ~~~vlilGA-GGAarAv~~aL~~~g~------~~i~V~NRt~~ra~~La~~~~~---~~~~~~~~~~~~~~~~~----~~ 191 (283)
T COG0169 126 GKRVLILGA-GGAARAVAFALAEAGA------KRITVVNRTRERAEELADLFGE---LGAAVEAAALADLEGLE----EA 191 (283)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHcCC------CEEEEEeCCHHHHHHHHHHhhh---ccccccccccccccccc----cc
Confidence 357999998 7799999999999983 5899999999999999887752 11111122332322222 78
Q ss_pred CeeEeccCCCCCC--cH-HHHHHHHHcCCcEEe---cCCcHHHHHHHHH
Q 014694 90 KLLLNCVGPYRLH--GD-PVAAACVHSGCDYLD---ISGEPEFMERMEA 132 (420)
Q Consensus 90 dvVIn~aGp~~~~--~~-~vv~Ac~~~g~~yvd---isge~~~~~~~~~ 132 (420)
|+|||+...-..- +. ++-..+.....-..| .-.+.+|++...+
T Consensus 192 dliINaTp~Gm~~~~~~~~~~~~~l~~~~~v~D~vY~P~~TplL~~A~~ 240 (283)
T COG0169 192 DLLINATPVGMAGPEGDSPVPAELLPKGAIVYDVVYNPLETPLLREARA 240 (283)
T ss_pred CEEEECCCCCCCCCCCCCCCcHHhcCcCCEEEEeccCCCCCHHHHHHHH
Confidence 9999998643222 12 222334444433333 3356677766554
|
|
| >PRK00048 dihydrodipicolinate reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0014 Score=63.14 Aligned_cols=87 Identities=15% Similarity=0.156 Sum_probs=61.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceE-EEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v-~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
++|.|+|++|.+|+.+++.+.+... +++ .+.+++.++.... . ..++...++++++++.+
T Consensus 2 mkV~IiG~~G~mG~~i~~~l~~~~~------~elvav~d~~~~~~~~~----~----------~~~i~~~~dl~~ll~~~ 61 (257)
T PRK00048 2 IKVAVAGASGRMGRELIEAVEAAED------LELVAAVDRPGSPLVGQ----G----------ALGVAITDDLEAVLADA 61 (257)
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCC------CEEEEEEecCCcccccc----C----------CCCccccCCHHHhccCC
Confidence 6899999999999999988876531 454 4567776554221 1 11222234566677789
Q ss_pred CeeEeccCCCCCCcHHHHHHHHHcCCcEEe
Q 014694 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLD 119 (420)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvd 119 (420)
|+||.++-|... ..++++|.++|+|.+.
T Consensus 62 DvVid~t~p~~~--~~~~~~al~~G~~vvi 89 (257)
T PRK00048 62 DVLIDFTTPEAT--LENLEFALEHGKPLVI 89 (257)
T ss_pred CEEEECCCHHHH--HHHHHHHHHcCCCEEE
Confidence 999999976543 7889999999999764
|
|
| >PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0079 Score=48.39 Aligned_cols=91 Identities=15% Similarity=0.217 Sum_probs=62.1
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEE-ecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA-GRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~ia-gRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
+|.|+| +|.+|..+++.|++.+. ...++.+. .|++++++++.++.+ +.+... +..++++++|
T Consensus 1 kI~iIG-~G~mg~al~~~l~~~g~----~~~~v~~~~~r~~~~~~~~~~~~~------~~~~~~------~~~~~~~~ad 63 (96)
T PF03807_consen 1 KIGIIG-AGNMGSALARGLLASGI----KPHEVIIVSSRSPEKAAELAKEYG------VQATAD------DNEEAAQEAD 63 (96)
T ss_dssp EEEEES-TSHHHHHHHHHHHHTTS-----GGEEEEEEESSHHHHHHHHHHCT------TEEESE------EHHHHHHHTS
T ss_pred CEEEEC-CCHHHHHHHHHHHHCCC----CceeEEeeccCcHHHHHHHHHhhc------cccccC------ChHHhhccCC
Confidence 477885 69999999999999872 12688855 999999999888763 222221 2456677899
Q ss_pred eeEeccCCCCCCcHHHHHHH--HHcCCcEEecC
Q 014694 91 LLLNCVGPYRLHGDPVAAAC--VHSGCDYLDIS 121 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~Ac--~~~g~~yvdis 121 (420)
+||.|+-|... ..+++.. ...+..+|+++
T Consensus 64 vvilav~p~~~--~~v~~~i~~~~~~~~vis~~ 94 (96)
T PF03807_consen 64 VVILAVKPQQL--PEVLSEIPHLLKGKLVISIA 94 (96)
T ss_dssp EEEE-S-GGGH--HHHHHHHHHHHTTSEEEEES
T ss_pred EEEEEECHHHH--HHHHHHHhhccCCCEEEEeC
Confidence 99999988654 3444443 44556677764
|
It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D .... |
| >PRK08644 thiamine biosynthesis protein ThiF; Provisional | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0042 Score=58.20 Aligned_cols=106 Identities=13% Similarity=0.105 Sum_probs=71.1
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh------------------hHHHHHHHHhCC-CCCCCc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP------------------TRVKQALQWASP-SHSLSI 69 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~------------------~kl~~~~~~l~~-~~~~~~ 69 (420)
+..+|+|.|+ |.+|..+++.|++.|- -++.+.+.+. .|.+.+.+.+.. ....++
T Consensus 27 ~~~~V~ViG~-GglGs~ia~~La~~Gv------g~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v 99 (212)
T PRK08644 27 KKAKVGIAGA-GGLGSNIAVALARSGV------GNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEI 99 (212)
T ss_pred hCCCEEEECc-CHHHHHHHHHHHHcCC------CeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEE
Confidence 3457999997 7799999999999883 4677777651 344444444421 011233
Q ss_pred cEEEEeCCCHHHHHHHHhccCeeEeccCCCCCCcHHHHHHHHHc-CCcEEecCCc
Q 014694 70 PILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHS-GCDYLDISGE 123 (420)
Q Consensus 70 ~~i~~D~~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~-g~~yvdisge 123 (420)
..+...++ .+.+.+.++++|+||.|...+.. -..+.+.|.+. ++.+|..++.
T Consensus 100 ~~~~~~i~-~~~~~~~~~~~DvVI~a~D~~~~-r~~l~~~~~~~~~~p~I~~~~~ 152 (212)
T PRK08644 100 EAHNEKID-EDNIEELFKDCDIVVEAFDNAET-KAMLVETVLEHPGKKLVAASGM 152 (212)
T ss_pred EEEeeecC-HHHHHHHHcCCCEEEECCCCHHH-HHHHHHHHHHhCCCCEEEeehh
Confidence 33444454 35677889999999999754332 24577889998 9988887654
|
|
| >cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0058 Score=53.20 Aligned_cols=102 Identities=13% Similarity=0.211 Sum_probs=68.5
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC-------------------hhHHHHHHHHhCCCCCCCcc--
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASPSHSLSIP-- 70 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs-------------------~~kl~~~~~~l~~~~~~~~~-- 70 (420)
+|+|.|+ |.+|..+++.|++.+- -++.+.+.+ ..|.+.+.+.+.. ..+.++
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv------~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~-~~p~v~i~ 72 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGV------GKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNE-LNPGVNVT 72 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCC------CEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHH-HCCCcEEE
Confidence 4889997 8899999999999883 367777643 1233334443321 112333
Q ss_pred EEEEeCCCHHHHHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCc
Q 014694 71 ILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGE 123 (420)
Q Consensus 71 ~i~~D~~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge 123 (420)
.+..++.+ +...+.+++.|+||.|...+. .-..+.+.|.+.++.+++....
T Consensus 73 ~~~~~~~~-~~~~~~~~~~diVi~~~d~~~-~~~~l~~~~~~~~i~~i~~~~~ 123 (143)
T cd01483 73 AVPEGISE-DNLDDFLDGVDLVIDAIDNIA-VRRALNRACKELGIPVIDAGGL 123 (143)
T ss_pred EEeeecCh-hhHHHHhcCCCEEEECCCCHH-HHHHHHHHHHHcCCCEEEEcCC
Confidence 34444433 344778889999999998743 2366789999999999987543
|
This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. |
| >TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0032 Score=63.26 Aligned_cols=104 Identities=14% Similarity=0.129 Sum_probs=62.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEE-ecChhHHHHHHHHhCC----CCCCCccEEEEeCCCHHHHHHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA-GRNPTRVKQALQWASP----SHSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~ia-gRs~~kl~~~~~~l~~----~~~~~~~~i~~D~~d~~sl~~~ 85 (420)
++|.|+||||++|+.+++.|.++.. .++..+ .++.+..+.+.+.... .....+.-+.+.-.+++ .
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~~~------~~l~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 70 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKHPY------FELAKVVASPRSAGKRYGEAVKWIEPGDMPEYVRDLPIVEPEPV----A 70 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC------ceEEEEEEChhhcCCcchhhccccccCCCccccceeEEEeCCHH----H
Confidence 4799999999999999998887652 566555 3332221111111100 00000111111111222 2
Q ss_pred HhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHH
Q 014694 86 CSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEF 126 (420)
Q Consensus 86 ~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~ 126 (420)
..++|+|+.+++.. ....+++++.+.|++.||+||+..+
T Consensus 71 ~~~~DvVf~a~p~~--~s~~~~~~~~~~G~~VIDlsg~fR~ 109 (341)
T TIGR00978 71 SKDVDIVFSALPSE--VAEEVEPKLAEAGKPVFSNASNHRM 109 (341)
T ss_pred hccCCEEEEeCCHH--HHHHHHHHHHHCCCEEEECChhhcc
Confidence 36899999888643 3356778888999999999998654
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan. |
| >PRK08223 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0045 Score=60.41 Aligned_cols=103 Identities=14% Similarity=0.113 Sum_probs=67.2
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC-------------------hhHHHHHHHHhCCCCCCCc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASPSHSLSI 69 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs-------------------~~kl~~~~~~l~~~~~~~~ 69 (420)
+.-+|+|.|+ |.+|..++++|++.|- -++.+++.+ ..|.+.+.+.+.. ..+.+
T Consensus 26 ~~s~VlIvG~-GGLGs~va~~LA~aGV------G~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~-iNP~v 97 (287)
T PRK08223 26 RNSRVAIAGL-GGVGGIHLLTLARLGI------GKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRD-INPEL 97 (287)
T ss_pred hcCCEEEECC-CHHHHHHHHHHHHhCC------CeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHH-HCCCC
Confidence 3457999998 7799999999999983 466666643 1233333333321 12334
Q ss_pred cE--EEEeCCCHHHHHHHHhccCeeEeccCCCC-CCcHHHHHHHHHcCCcEEec
Q 014694 70 PI--LTADTTDPPSLHRLCSQTKLLLNCVGPYR-LHGDPVAAACVHSGCDYLDI 120 (420)
Q Consensus 70 ~~--i~~D~~d~~sl~~~~~~~dvVIn~aGp~~-~~~~~vv~Ac~~~g~~yvdi 120 (420)
++ +...++ ++.+.++++++|+||++.-.+. ..-..+-++|.+.++.+|..
T Consensus 98 ~V~~~~~~l~-~~n~~~ll~~~DlVvD~~D~~~~~~r~~ln~~c~~~~iP~V~~ 150 (287)
T PRK08223 98 EIRAFPEGIG-KENADAFLDGVDVYVDGLDFFEFDARRLVFAACQQRGIPALTA 150 (287)
T ss_pred EEEEEecccC-ccCHHHHHhCCCEEEECCCCCcHHHHHHHHHHHHHcCCCEEEE
Confidence 43 333443 4567888999999998886542 12245678999998877764
|
|
| >PRK08762 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0045 Score=63.01 Aligned_cols=103 Identities=14% Similarity=0.159 Sum_probs=72.0
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC-------------------hhHHHHHHHHhCCCCCCCc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASPSHSLSI 69 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs-------------------~~kl~~~~~~l~~~~~~~~ 69 (420)
+..+|+|+|+ |.+|..+++.|++.|- -++.+++++ ..|.+.+.+.+.. ..+.+
T Consensus 134 ~~~~VlvvG~-GG~Gs~ia~~La~~Gv------g~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~-~np~v 205 (376)
T PRK08762 134 LEARVLLIGA-GGLGSPAALYLAAAGV------GTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAA-LNPDV 205 (376)
T ss_pred hcCcEEEECC-CHHHHHHHHHHHHcCC------CeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHH-HCCCC
Confidence 3457999987 7799999999999983 478888886 3566555555532 11233
Q ss_pred cE--EEEeCCCHHHHHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecC
Q 014694 70 PI--LTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 70 ~~--i~~D~~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdis 121 (420)
.+ +...+ +.+.+.++++++|+||+|...+.. ...+-++|.+.++.+|...
T Consensus 206 ~v~~~~~~~-~~~~~~~~~~~~D~Vv~~~d~~~~-r~~ln~~~~~~~ip~i~~~ 257 (376)
T PRK08762 206 QVEAVQERV-TSDNVEALLQDVDVVVDGADNFPT-RYLLNDACVKLGKPLVYGA 257 (376)
T ss_pred EEEEEeccC-ChHHHHHHHhCCCEEEECCCCHHH-HHHHHHHHHHcCCCEEEEE
Confidence 33 32233 346778889999999999876431 2356789999999888763
|
|
| >cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0061 Score=57.64 Aligned_cols=103 Identities=17% Similarity=0.228 Sum_probs=68.8
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC-------------------hhHHHHHHHHhCC-CCCCCc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASP-SHSLSI 69 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs-------------------~~kl~~~~~~l~~-~~~~~~ 69 (420)
..+|+|.|+ |.+|..+++.|++.|- -++.+++.+ ..|.+.+.+.+.. ....++
T Consensus 21 ~~~VlivG~-GglGs~va~~La~~Gv------g~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i 93 (228)
T cd00757 21 NARVLVVGA-GGLGSPAAEYLAAAGV------GKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEI 93 (228)
T ss_pred CCcEEEECC-CHHHHHHHHHHHHcCC------CEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEE
Confidence 357999996 7799999999999883 356665432 2344444444432 011233
Q ss_pred cEEEEeCCCHHHHHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecC
Q 014694 70 PILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 70 ~~i~~D~~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdis 121 (420)
+.+..++ +.+.+.++++++|+||.|..... ....+-+.|.+.++.+|+..
T Consensus 94 ~~~~~~i-~~~~~~~~~~~~DvVi~~~d~~~-~r~~l~~~~~~~~ip~i~~g 143 (228)
T cd00757 94 EAYNERL-DAENAEELIAGYDLVLDCTDNFA-TRYLINDACVKLGKPLVSGA 143 (228)
T ss_pred EEeccee-CHHHHHHHHhCCCEEEEcCCCHH-HHHHHHHHHHHcCCCEEEEE
Confidence 3344444 45678888999999999987543 22557788999999888863
|
Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1). |
| >PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0021 Score=63.58 Aligned_cols=85 Identities=15% Similarity=0.112 Sum_probs=60.6
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
+++|-|.|||||+|+.+++.|.++.. +++....++..+ |+.+ .+..++++
T Consensus 2 ~~~VaIvGAtGy~G~eLlrlL~~hp~------~~l~~~~s~~~~---------------------~~~~---~~~~~~~~ 51 (313)
T PRK11863 2 KPKVFIDGEAGTTGLQIRERLAGRSD------IELLSIPEAKRK---------------------DAAA---RRELLNAA 51 (313)
T ss_pred CcEEEEECCCCHHHHHHHHHHhcCCC------eEEEEEecCCCC---------------------cccC---chhhhcCC
Confidence 47899999999999999999988852 666655544322 0111 12345679
Q ss_pred CeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHH
Q 014694 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEF 126 (420)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~ 126 (420)
|+||.|... .....++..+.+.|+..||+|++..+
T Consensus 52 DvvFlalp~--~~s~~~~~~~~~~g~~VIDlSadfRl 86 (313)
T PRK11863 52 DVAILCLPD--DAAREAVALIDNPATRVIDASTAHRT 86 (313)
T ss_pred CEEEECCCH--HHHHHHHHHHHhCCCEEEECChhhhc
Confidence 999988742 23466777778899999999988754
|
|
| >TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0025 Score=62.84 Aligned_cols=84 Identities=14% Similarity=0.095 Sum_probs=59.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
++|.|.|||||+|..+++.|.++.. +++..+.-+.. + + +.+.+++++++|
T Consensus 2 ~~v~IvGasGy~G~el~rlL~~HP~------~el~~l~s~~~--------~-------------~---~~~~~~~~~~~D 51 (310)
T TIGR01851 2 PKVFIDGEAGTTGLQIRERLSGRDD------IELLSIAPDRR--------K-------------D---AAERAKLLNAAD 51 (310)
T ss_pred CeEEEECCCChhHHHHHHHHhCCCC------eEEEEEecccc--------c-------------C---cCCHhHhhcCCC
Confidence 6899999999999999999999852 56544432211 1 0 112345667899
Q ss_pred eeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHH
Q 014694 91 LLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEF 126 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~ 126 (420)
+||.|+.. .....++....+.|+..||+|++..+
T Consensus 52 ~vFlalp~--~~s~~~~~~~~~~g~~VIDlSadfRl 85 (310)
T TIGR01851 52 VAILCLPD--DAAREAVSLVDNPNTCIIDASTAYRT 85 (310)
T ss_pred EEEECCCH--HHHHHHHHHHHhCCCEEEECChHHhC
Confidence 99988743 23466777777889999999987654
|
This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment. |
| >cd01487 E1_ThiF_like E1_ThiF_like | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0072 Score=54.80 Aligned_cols=103 Identities=16% Similarity=0.107 Sum_probs=66.9
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh------------------hHHHHHHHHhCC-CCCCCccEE
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP------------------TRVKQALQWASP-SHSLSIPIL 72 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~------------------~kl~~~~~~l~~-~~~~~~~~i 72 (420)
+|+|+|+ |.+|..+++.|++.+- -++.+.+.+. .|.+.+.+.+.. ....++..+
T Consensus 1 ~VlViG~-GglGs~ia~~La~~Gv------g~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~ 73 (174)
T cd01487 1 KVGIAGA-GGLGSNIAVLLARSGV------GNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAI 73 (174)
T ss_pred CEEEECc-CHHHHHHHHHHHHcCC------CeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEE
Confidence 4889997 7899999999999883 3688888764 233333333321 011233334
Q ss_pred EEeCCCHHHHHHHHhccCeeEeccCCCCCCcHHHHHHHHHc-CCcEEecCCc
Q 014694 73 TADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHS-GCDYLDISGE 123 (420)
Q Consensus 73 ~~D~~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~-g~~yvdisge 123 (420)
...+ +.+.+.+.++++|+||.|...... -..+.+.|.+. ++.+|.-++.
T Consensus 74 ~~~~-~~~~~~~~l~~~DlVi~~~d~~~~-r~~i~~~~~~~~~ip~i~~~~~ 123 (174)
T cd01487 74 NIKI-DENNLEGLFGDCDIVVEAFDNAET-KAMLAESLLGNKNKPVVCASGM 123 (174)
T ss_pred Eeec-ChhhHHHHhcCCCEEEECCCCHHH-HHHHHHHHHHHCCCCEEEEehh
Confidence 4444 346678889999999999654322 14467777777 8888876544
|
Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0038 Score=63.98 Aligned_cols=73 Identities=14% Similarity=0.114 Sum_probs=57.2
Q ss_pred CcceEEEEcC----------------CcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEE
Q 014694 9 ELFDVIILGA----------------SGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPIL 72 (420)
Q Consensus 9 ~~~~IvV~GA----------------TG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i 72 (420)
...+|+|+|| +|.+|..++++|+++| .+|.+.+++.+ ++ . . ..+.
T Consensus 187 ~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~G-------a~V~~v~~~~~-~~-----~----~--~~~~ 247 (399)
T PRK05579 187 AGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRG-------ADVTLVSGPVN-LP-----T----P--AGVK 247 (399)
T ss_pred CCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCC-------CEEEEeCCCcc-cc-----C----C--CCcE
Confidence 3457999999 8999999999999998 79999988752 21 1 1 1245
Q ss_pred EEeCCCHHHHHHHHh----ccCeeEeccCCCC
Q 014694 73 TADTTDPPSLHRLCS----QTKLLLNCVGPYR 100 (420)
Q Consensus 73 ~~D~~d~~sl~~~~~----~~dvVIn~aGp~~ 100 (420)
.+|+++.+++.+.+. +.|++||+||...
T Consensus 248 ~~dv~~~~~~~~~v~~~~~~~DilI~~Aav~d 279 (399)
T PRK05579 248 RIDVESAQEMLDAVLAALPQADIFIMAAAVAD 279 (399)
T ss_pred EEccCCHHHHHHHHHHhcCCCCEEEEcccccc
Confidence 689999888887764 5899999999754
|
|
| >PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0025 Score=54.72 Aligned_cols=105 Identities=16% Similarity=0.268 Sum_probs=56.9
Q ss_pred CCCCCCCCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEE-EEecChhHHHHHHHHhCC-------CCCCCccEE
Q 014694 1 MQAQSQIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLA-LAGRNPTRVKQALQWASP-------SHSLSIPIL 72 (420)
Q Consensus 1 m~~~~~~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~-iagRs~~kl~~~~~~l~~-------~~~~~~~~i 72 (420)
|..|.....+++|-|+|+ |-+|.++++.|.+.+ +.|. +..|+.++.+++...+.. ....+.+++
T Consensus 1 ~~~~~~~~~~l~I~iIGa-GrVG~~La~aL~~ag-------~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv 72 (127)
T PF10727_consen 1 MNTPATQAARLKIGIIGA-GRVGTALARALARAG-------HEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLV 72 (127)
T ss_dssp -----------EEEEECT-SCCCCHHHHHHHHTT-------SEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEE
T ss_pred CCccccCCCccEEEEECC-CHHHHHHHHHHHHCC-------CeEEEEEeCCcccccccccccccccccccccccccCCEE
Confidence 666655666789999998 999999999999987 5664 456887666665554432 012345666
Q ss_pred EEeCCCHHHHHHHHh---c------cCeeEeccCCCCCCcHHHHHHHHHcCCcE
Q 014694 73 TADTTDPPSLHRLCS---Q------TKLLLNCVGPYRLHGDPVAAACVHSGCDY 117 (420)
Q Consensus 73 ~~D~~d~~sl~~~~~---~------~dvVIn~aGp~~~~~~~vv~Ac~~~g~~y 117 (420)
..-+.| +.+..+++ . -.+|+||.|-. +..+++...+.|+..
T Consensus 73 ~iavpD-daI~~va~~La~~~~~~~g~iVvHtSGa~---~~~vL~p~~~~Ga~~ 122 (127)
T PF10727_consen 73 FIAVPD-DAIAEVAEQLAQYGAWRPGQIVVHTSGAL---GSDVLAPARERGAIV 122 (127)
T ss_dssp EE-S-C-CHHHHHHHHHHCC--S-TT-EEEES-SS-----GGGGHHHHHTT-EE
T ss_pred EEEech-HHHHHHHHHHHHhccCCCCcEEEECCCCC---hHHhhhhHHHCCCeE
Confidence 666655 34554443 2 35899999853 456777777777743
|
This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A. |
| >PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0027 Score=56.80 Aligned_cols=94 Identities=17% Similarity=0.175 Sum_probs=58.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
++|-++|- |-.|+.++++|++.+ ++|.+.+|++++.+++.+.- ...+ ++..++++++|
T Consensus 2 ~~Ig~IGl-G~mG~~~a~~L~~~g-------~~v~~~d~~~~~~~~~~~~g---------~~~~-----~s~~e~~~~~d 59 (163)
T PF03446_consen 2 MKIGFIGL-GNMGSAMARNLAKAG-------YEVTVYDRSPEKAEALAEAG---------AEVA-----DSPAEAAEQAD 59 (163)
T ss_dssp BEEEEE---SHHHHHHHHHHHHTT-------TEEEEEESSHHHHHHHHHTT---------EEEE-----SSHHHHHHHBS
T ss_pred CEEEEEch-HHHHHHHHHHHHhcC-------CeEEeeccchhhhhhhHHhh---------hhhh-----hhhhhHhhccc
Confidence 47888885 999999999999988 89999999999998877531 2233 34667777888
Q ss_pred eeEeccCCCCCCcHHHHHH-----HHHcCCcEEecCCcHHHH
Q 014694 91 LLLNCVGPYRLHGDPVAAA-----CVHSGCDYLDISGEPEFM 127 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~A-----c~~~g~~yvdisge~~~~ 127 (420)
+||.|+..... -+.++.. ....|.-+||.|...+-.
T Consensus 60 vvi~~v~~~~~-v~~v~~~~~i~~~l~~g~iiid~sT~~p~~ 100 (163)
T PF03446_consen 60 VVILCVPDDDA-VEAVLFGENILAGLRPGKIIIDMSTISPET 100 (163)
T ss_dssp EEEE-SSSHHH-HHHHHHCTTHGGGS-TTEEEEE-SS--HHH
T ss_pred ceEeecccchh-hhhhhhhhHHhhccccceEEEecCCcchhh
Confidence 88888743211 1122211 113455688877554443
|
1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A .... |
| >PRK13304 L-aspartate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.008 Score=58.20 Aligned_cols=101 Identities=15% Similarity=0.251 Sum_probs=71.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcce-EEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKS-LALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~-v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
++|.|+|. |.+|+.+++.|.+... + .+ +.+.+|+.++.+.+.+..+ .. . ..| +++++.++
T Consensus 2 mrIgIIG~-G~iG~~ia~~l~~~~~-~----~elv~v~d~~~~~a~~~a~~~~------~~--~--~~~---~~ell~~~ 62 (265)
T PRK13304 2 LKIGIVGC-GAIASLITKAILSGRI-N----AELYAFYDRNLEKAENLASKTG------AK--A--CLS---IDELVEDV 62 (265)
T ss_pred CEEEEECc-cHHHHHHHHHHHcCCC-C----eEEEEEECCCHHHHHHHHHhcC------Ce--e--ECC---HHHHhcCC
Confidence 58999995 9999999999887531 1 44 5678899888877665432 11 1 123 45555789
Q ss_pred CeeEeccCCCCCCcHHHHHHHHHcCCcEEecCC----cHHHHHHHHH
Q 014694 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDISG----EPEFMERMEA 132 (420)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisg----e~~~~~~~~~ 132 (420)
|+|+.|+.+... ..++..+.++|.|.+.++- +.++.+++.+
T Consensus 63 DvVvi~a~~~~~--~~~~~~al~~Gk~Vvv~s~gAl~d~~~~~~L~~ 107 (265)
T PRK13304 63 DLVVECASVNAV--EEVVPKSLENGKDVIIMSVGALADKELFLKLYK 107 (265)
T ss_pred CEEEEcCChHHH--HHHHHHHHHcCCCEEEEchHHhcCHHHHHHHHH
Confidence 999999976443 5777888899999888764 5666666665
|
|
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0078 Score=50.13 Aligned_cols=102 Identities=19% Similarity=0.252 Sum_probs=70.2
Q ss_pred EEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-HhccCe
Q 014694 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CSQTKL 91 (420)
Q Consensus 13 IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~-~~~~dv 91 (420)
|+|+|. |-+|+.+++.|.+.+ .++.+.++++++.+.+.++ .+.++.+|.+|++.++++ +.+++.
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~-------~~vvvid~d~~~~~~~~~~-------~~~~i~gd~~~~~~l~~a~i~~a~~ 65 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGG-------IDVVVIDRDPERVEELREE-------GVEVIYGDATDPEVLERAGIEKADA 65 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTT-------SEEEEEESSHHHHHHHHHT-------TSEEEES-TTSHHHHHHTTGGCESE
T ss_pred eEEEcC-CHHHHHHHHHHHhCC-------CEEEEEECCcHHHHHHHhc-------ccccccccchhhhHHhhcCccccCE
Confidence 678887 789999999999954 6899999999998776652 368999999999999987 678998
Q ss_pred eEeccCCCCCCcHHHHHHHHH-cC-CcEEecCCcHHHHHHH
Q 014694 92 LLNCVGPYRLHGDPVAAACVH-SG-CDYLDISGEPEFMERM 130 (420)
Q Consensus 92 VIn~aGp~~~~~~~vv~Ac~~-~g-~~yvdisge~~~~~~~ 130 (420)
||-+..-- .....+...+.+ ++ .+.+-...+....+.+
T Consensus 66 vv~~~~~d-~~n~~~~~~~r~~~~~~~ii~~~~~~~~~~~l 105 (116)
T PF02254_consen 66 VVILTDDD-EENLLIALLARELNPDIRIIARVNDPENAELL 105 (116)
T ss_dssp EEEESSSH-HHHHHHHHHHHHHTTTSEEEEEESSHHHHHHH
T ss_pred EEEccCCH-HHHHHHHHHHHHHCCCCeEEEEECCHHHHHHH
Confidence 88776521 112333444444 23 3444444555554444
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >PRK06728 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0042 Score=62.30 Aligned_cols=97 Identities=15% Similarity=0.183 Sum_probs=63.8
Q ss_pred CCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcce---EEEEec--ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHH
Q 014694 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKS---LALAGR--NPTRVKQALQWASPSHSLSIPILTADTTDPPSL 82 (420)
Q Consensus 8 ~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~---v~iagR--s~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl 82 (420)
.+.++|-|+||||++|+.+++.|.++.. +. +.++.. +..+. + .+. .. ....-++ |+++
T Consensus 3 ~~~~~VaIvGATG~vG~ell~lL~~h~~------f~v~~l~~~aS~~saGk~--~--~~~---~~--~l~v~~~-~~~~- 65 (347)
T PRK06728 3 EKGYHVAVVGATGAVGQKIIELLEKETK------FNIAEVTLLSSKRSAGKT--V--QFK---GR--EIIIQEA-KINS- 65 (347)
T ss_pred CCCCEEEEEeCCCHHHHHHHHHHHHCCC------CCcccEEEEECcccCCCC--e--eeC---Cc--ceEEEeC-CHHH-
Confidence 4568999999999999999999987642 33 433332 22222 1 111 11 2222233 4433
Q ss_pred HHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHH
Q 014694 83 HRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEF 126 (420)
Q Consensus 83 ~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~ 126 (420)
++++|+|+.+++.- ....++..+.++|+..||.|+...+
T Consensus 66 ---~~~~Divf~a~~~~--~s~~~~~~~~~~G~~VID~Ss~fR~ 104 (347)
T PRK06728 66 ---FEGVDIAFFSAGGE--VSRQFVNQAVSSGAIVIDNTSEYRM 104 (347)
T ss_pred ---hcCCCEEEECCChH--HHHHHHHHHHHCCCEEEECchhhcC
Confidence 36799999988642 4577778888899999999988755
|
|
| >PRK08040 putative semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.002 Score=64.53 Aligned_cols=101 Identities=19% Similarity=0.202 Sum_probs=62.8
Q ss_pred CCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh
Q 014694 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 8 ~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
.+.++|-|+||||++|+.+++.|.++.-+ ..++..+..+.+.-+.+. +. ..++.+. +++ . ..+.
T Consensus 2 ~~~~~vaIvGATG~vG~ellrlL~~~~hP----~~~l~~laS~~saG~~~~--~~---~~~~~v~--~~~---~--~~~~ 65 (336)
T PRK08040 2 SEGWNIALLGATGAVGEALLELLAERQFP----VGELYALASEESAGETLR--FG---GKSVTVQ--DAA---E--FDWS 65 (336)
T ss_pred CCCCEEEEEccCCHHHHHHHHHHhcCCCC----ceEEEEEEccCcCCceEE--EC---CcceEEE--eCc---h--hhcc
Confidence 47789999999999999999999885311 255544443222111110 11 1111111 321 1 1236
Q ss_pred ccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHH
Q 014694 88 QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEF 126 (420)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~ 126 (420)
++|+|+.+++.- ....++....+.|+..||+|++...
T Consensus 66 ~~Dvvf~a~p~~--~s~~~~~~~~~~g~~VIDlS~~fRl 102 (336)
T PRK08040 66 QAQLAFFVAGRE--ASAAYAEEATNAGCLVIDSSGLFAL 102 (336)
T ss_pred CCCEEEECCCHH--HHHHHHHHHHHCCCEEEECChHhcC
Confidence 799999988542 3467777778899999999987643
|
|
| >PRK09620 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0016 Score=61.79 Aligned_cols=80 Identities=8% Similarity=0.032 Sum_probs=51.5
Q ss_pred cceEEEEcCC----------------cHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEE
Q 014694 10 LFDVIILGAS----------------GFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILT 73 (420)
Q Consensus 10 ~~~IvV~GAT----------------G~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~ 73 (420)
..+|+|++|. ||+|.++|++|+++| ++|.+.++...... ..+. .......+.
T Consensus 3 gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~G-------a~V~li~g~~~~~~---~~~~--~~~~~~~V~ 70 (229)
T PRK09620 3 GKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKG-------AHVIYLHGYFAEKP---NDIN--NQLELHPFE 70 (229)
T ss_pred CCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCC-------CeEEEEeCCCcCCC---cccC--CceeEEEEe
Confidence 3578999775 999999999999998 78887775322110 0000 011122344
Q ss_pred EeCCCHHHHHHHHh--ccCeeEeccCCCCC
Q 014694 74 ADTTDPPSLHRLCS--QTKLLLNCVGPYRL 101 (420)
Q Consensus 74 ~D~~d~~sl~~~~~--~~dvVIn~aGp~~~ 101 (420)
.|.+..+.+.+++. ++|+|||+|+....
T Consensus 71 s~~d~~~~l~~~~~~~~~D~VIH~AAvsD~ 100 (229)
T PRK09620 71 GIIDLQDKMKSIITHEKVDAVIMAAAGSDW 100 (229)
T ss_pred cHHHHHHHHHHHhcccCCCEEEECccccce
Confidence 43344467778774 68999999998443
|
|
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0055 Score=60.09 Aligned_cols=91 Identities=14% Similarity=0.150 Sum_probs=62.9
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
..+++|+|+ |.+|+.+++.|...+ .+|.+..|+.++++... +.+ .. .. +.+++.+.++++
T Consensus 151 gk~v~IiG~-G~iG~avA~~L~~~G-------~~V~v~~R~~~~~~~~~-~~g------~~--~~---~~~~l~~~l~~a 210 (287)
T TIGR02853 151 GSNVMVLGF-GRTGMTIARTFSALG-------ARVFVGARSSADLARIT-EMG------LI--PF---PLNKLEEKVAEI 210 (287)
T ss_pred CCEEEEEcC-hHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHH-HCC------Ce--ee---cHHHHHHHhccC
Confidence 357999997 889999999999887 78999999988765543 221 11 11 245678888999
Q ss_pred CeeEeccCCCCCCcHHHHHHHHHcCCcEEecCC
Q 014694 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDISG 122 (420)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisg 122 (420)
|+|||++. .......+++.. +.++-.+|++.
T Consensus 211 DiVint~P-~~ii~~~~l~~~-k~~aliIDlas 241 (287)
T TIGR02853 211 DIVINTIP-ALVLTADVLSKL-PKHAVIIDLAS 241 (287)
T ss_pred CEEEECCC-hHHhCHHHHhcC-CCCeEEEEeCc
Confidence 99999984 322233444333 34556888764
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0048 Score=63.55 Aligned_cols=72 Identities=22% Similarity=0.320 Sum_probs=57.3
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
..+|+|+|+ |.+|+.++++|...+. .++.++.|+.++.+.+.++++ ... +...+++.+.+.++
T Consensus 181 ~kkvlviGa-G~~a~~va~~L~~~g~------~~I~V~nRt~~ra~~La~~~~-----~~~-----~~~~~~l~~~l~~a 243 (414)
T PRK13940 181 SKNVLIIGA-GQTGELLFRHVTALAP------KQIMLANRTIEKAQKITSAFR-----NAS-----AHYLSELPQLIKKA 243 (414)
T ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCC------CEEEEECCCHHHHHHHHHHhc-----CCe-----EecHHHHHHHhccC
Confidence 347999997 8899999999999873 479999999999988887663 111 22335678889999
Q ss_pred CeeEeccCC
Q 014694 90 KLLLNCVGP 98 (420)
Q Consensus 90 dvVIn~aGp 98 (420)
|+||||.+.
T Consensus 244 DiVI~aT~a 252 (414)
T PRK13940 244 DIIIAAVNV 252 (414)
T ss_pred CEEEECcCC
Confidence 999999985
|
|
| >PRK15116 sulfur acceptor protein CsdL; Provisional | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.011 Score=57.24 Aligned_cols=106 Identities=10% Similarity=0.159 Sum_probs=69.6
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC-------------------hhHHHHHHHHhCCCCCCCc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASPSHSLSI 69 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs-------------------~~kl~~~~~~l~~~~~~~~ 69 (420)
+..+|+|+|+ |.+|..+++.|++.|- -++.+++.+ ..|.+.+.+.+.. -.+.+
T Consensus 29 ~~s~VlVvG~-GGVGs~vae~Lar~GV------g~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~-INP~~ 100 (268)
T PRK15116 29 ADAHICVVGI-GGVGSWAAEALARTGI------GAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQ-INPEC 100 (268)
T ss_pred cCCCEEEECc-CHHHHHHHHHHHHcCC------CEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHh-HCCCc
Confidence 3457999987 7799999999999883 356666643 1233334443321 12233
Q ss_pred cEEEE-eCCCHHHHHHHHh-ccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCc
Q 014694 70 PILTA-DTTDPPSLHRLCS-QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGE 123 (420)
Q Consensus 70 ~~i~~-D~~d~~sl~~~~~-~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge 123 (420)
.+... +.-+++.+.+++. ++|+||.|.+.... -..+.+.|.++++.+|.+.|.
T Consensus 101 ~V~~i~~~i~~e~~~~ll~~~~D~VIdaiD~~~~-k~~L~~~c~~~~ip~I~~gGa 155 (268)
T PRK15116 101 RVTVVDDFITPDNVAEYMSAGFSYVIDAIDSVRP-KAALIAYCRRNKIPLVTTGGA 155 (268)
T ss_pred EEEEEecccChhhHHHHhcCCCCEEEEcCCCHHH-HHHHHHHHHHcCCCEEEECCc
Confidence 33333 2334566777774 79999999986432 356889999999999887543
|
|
| >PRK05690 molybdopterin biosynthesis protein MoeB; Provisional | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.011 Score=56.51 Aligned_cols=102 Identities=19% Similarity=0.199 Sum_probs=68.2
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh-------------------hHHHHHHHHhCCCCCCCc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-------------------TRVKQALQWASPSHSLSI 69 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~-------------------~kl~~~~~~l~~~~~~~~ 69 (420)
+..+|+|+|+ |.+|..++++|++.|- -++.+++.+. .|.+.+.+.+.. ..+.+
T Consensus 31 ~~~~VliiG~-GglGs~va~~La~~Gv------g~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~-lnp~v 102 (245)
T PRK05690 31 KAARVLVVGL-GGLGCAASQYLAAAGV------GTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALAR-INPHI 102 (245)
T ss_pred cCCeEEEECC-CHHHHHHHHHHHHcCC------CEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHH-HCCCC
Confidence 3458999998 8899999999999883 4677766431 244333343321 11233
Q ss_pred cE--EEEeCCCHHHHHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEec
Q 014694 70 PI--LTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDI 120 (420)
Q Consensus 70 ~~--i~~D~~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdi 120 (420)
++ +...+ +++.+.++++++|+||.|...+.. -..+-++|.++++.+|+.
T Consensus 103 ~i~~~~~~i-~~~~~~~~~~~~DiVi~~~D~~~~-r~~ln~~~~~~~ip~v~~ 153 (245)
T PRK05690 103 AIETINARL-DDDELAALIAGHDLVLDCTDNVAT-RNQLNRACFAAKKPLVSG 153 (245)
T ss_pred EEEEEeccC-CHHHHHHHHhcCCEEEecCCCHHH-HHHHHHHHHHhCCEEEEe
Confidence 33 33334 456678889999999999875432 245678899999888774
|
|
| >PRK00066 ldh L-lactate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.027 Score=56.00 Aligned_cols=82 Identities=15% Similarity=0.139 Sum_probs=57.6
Q ss_pred CCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC--CCCCCccEEEEeCCCHHHHHHH
Q 014694 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--SHSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 8 ~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~--~~~~~~~~i~~D~~d~~sl~~~ 85 (420)
.+..+|.|+|| |.+|..++..|+..+- .-++.+.++++++++....++.. +...++. +.. .+ .+.
T Consensus 4 ~~~~ki~iiGa-G~vG~~~a~~l~~~~~-----~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~-i~~--~~----~~~ 70 (315)
T PRK00066 4 KQHNKVVLVGD-GAVGSSYAYALVNQGI-----ADELVIIDINKEKAEGDAMDLSHAVPFTSPTK-IYA--GD----YSD 70 (315)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhcCC-----CCEEEEEeCCCchhHHHHHHHHhhccccCCeE-EEe--CC----HHH
Confidence 35569999998 9999999999887762 13799999999988877776642 1111222 222 23 234
Q ss_pred HhccCeeEeccCCCCCC
Q 014694 86 CSQTKLLLNCVGPYRLH 102 (420)
Q Consensus 86 ~~~~dvVIn~aGp~~~~ 102 (420)
++++|+||.++|.....
T Consensus 71 ~~~adivIitag~~~k~ 87 (315)
T PRK00066 71 CKDADLVVITAGAPQKP 87 (315)
T ss_pred hCCCCEEEEecCCCCCC
Confidence 78999999999975443
|
|
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0058 Score=52.17 Aligned_cols=106 Identities=19% Similarity=0.210 Sum_probs=64.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceE-EEEecChhH-HH-HHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNPTR-VK-QALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v-~iagRs~~k-l~-~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
|+|+|+|++|-+|+.+++.+.++.. +++ .+.+|+.+. .. .+.+-++. ....+. -.+++++++.
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~~~------~~lv~~v~~~~~~~~g~d~g~~~~~-~~~~~~-------v~~~l~~~~~ 66 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILESPG------FELVGAVDRKPSAKVGKDVGELAGI-GPLGVP-------VTDDLEELLE 66 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSTT------EEEEEEEETTTSTTTTSBCHHHCTS-ST-SSB-------EBS-HHHHTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCC------cEEEEEEecCCcccccchhhhhhCc-CCcccc-------cchhHHHhcc
Confidence 5899999999999999999998541 564 555666521 11 11111110 011111 1256788888
Q ss_pred ccCeeEeccCCCCCCcHHHHHHHHHcCCcEEe-cCCcHHHHHHHHH
Q 014694 88 QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLD-ISGEPEFMERMEA 132 (420)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvd-isge~~~~~~~~~ 132 (420)
.+|+||.+.-|.. ....++.|.++|++.|- .||-...-.+.++
T Consensus 67 ~~DVvIDfT~p~~--~~~~~~~~~~~g~~~ViGTTG~~~~~~~~l~ 110 (124)
T PF01113_consen 67 EADVVIDFTNPDA--VYDNLEYALKHGVPLVIGTTGFSDEQIDELE 110 (124)
T ss_dssp H-SEEEEES-HHH--HHHHHHHHHHHT-EEEEE-SSSHHHHHHHHH
T ss_pred cCCEEEEcCChHH--hHHHHHHHHhCCCCEEEECCCCCHHHHHHHH
Confidence 8999999886532 36788999999998666 6677665545444
|
In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A .... |
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.0023 Score=61.54 Aligned_cols=105 Identities=14% Similarity=0.227 Sum_probs=75.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEec---ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR---NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagR---s~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
..++|+|+.||||++.+.++....++ .++...+. ... + ..+++.. ..++.+++..|+.|...+..++.
T Consensus 7 ~~vlItgg~gfi~Sn~~~~~~~~~p~-----~~~v~idkL~~~s~-~-~~l~~~~--n~p~ykfv~~di~~~~~~~~~~~ 77 (331)
T KOG0747|consen 7 KNVLITGGAGFIGSNFINYLVDKYPD-----YKFVNLDKLDYCSN-L-KNLEPVR--NSPNYKFVEGDIADADLVLYLFE 77 (331)
T ss_pred ceEEEecCcCcchhhhhhhcccCCCC-----CcEEEEeecccccc-c-chhhhhc--cCCCceEeeccccchHHHHhhhc
Confidence 57999999999999999999988753 45544432 111 2 2222222 35678999999999998888876
Q ss_pred --ccCeeEeccCCCCCC----------------cHHHHHHHHHcCC--cEEecCCcH
Q 014694 88 --QTKLLLNCVGPYRLH----------------GDPVAAACVHSGC--DYLDISGEP 124 (420)
Q Consensus 88 --~~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~--~yvdisge~ 124 (420)
..|.|||.|+.++.. ...++++|...|- .+|++|.+-
T Consensus 78 ~~~id~vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTde 134 (331)
T KOG0747|consen 78 TEEIDTVIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDE 134 (331)
T ss_pred cCchhhhhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccc
Confidence 578999999876532 1677888888853 578887543
|
|
| >TIGR02355 moeB molybdopterin synthase sulfurylase MoeB | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.013 Score=56.02 Aligned_cols=103 Identities=16% Similarity=0.192 Sum_probs=67.3
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh-------------------hHHHHHHHHhCCCCCCCcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-------------------TRVKQALQWASPSHSLSIP 70 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~-------------------~kl~~~~~~l~~~~~~~~~ 70 (420)
..+|+|.|+ |.+|..++++|++.|- -++.+++.+. .|.+.+.+.+.. ..+.++
T Consensus 24 ~~~VlvvG~-GglGs~va~~La~~Gv------g~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~-inp~v~ 95 (240)
T TIGR02355 24 ASRVLIVGL-GGLGCAASQYLAAAGV------GNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQ-INPHIA 95 (240)
T ss_pred CCcEEEECc-CHHHHHHHHHHHHcCC------CEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHH-HCCCcE
Confidence 457999987 7799999999999883 4666666531 233333333321 113344
Q ss_pred EEEEe-CCCHHHHHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecC
Q 014694 71 ILTAD-TTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 71 ~i~~D-~~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdis 121 (420)
+...+ --+.+.+.++++++|+||.|...+.. -..+-++|.+.++.+|..+
T Consensus 96 i~~~~~~i~~~~~~~~~~~~DlVvd~~D~~~~-r~~ln~~~~~~~ip~v~~~ 146 (240)
T TIGR02355 96 INPINAKLDDAELAALIAEHDIVVDCTDNVEV-RNQLNRQCFAAKVPLVSGA 146 (240)
T ss_pred EEEEeccCCHHHHHHHhhcCCEEEEcCCCHHH-HHHHHHHHHHcCCCEEEEE
Confidence 33332 22446678889999999999876432 2456689999999888743
|
This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899). |
| >TIGR01759 MalateDH-SF1 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.014 Score=58.28 Aligned_cols=90 Identities=13% Similarity=-0.013 Sum_probs=56.2
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh--hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~--~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
++++|.|+||+|.+|+.++..|+..+-.......++.+.++++ ++++....++.........-+. +. ....+.+
T Consensus 2 ~p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~--i~--~~~~~~~ 77 (323)
T TIGR01759 2 KPVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVV--AT--TDPEEAF 77 (323)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcE--Ee--cChHHHh
Confidence 5789999999999999999999876521100113789999965 4565555555320000001011 11 1235678
Q ss_pred hccCeeEeccCCCCCC
Q 014694 87 SQTKLLLNCVGPYRLH 102 (420)
Q Consensus 87 ~~~dvVIn~aGp~~~~ 102 (420)
+++|+||.+||.....
T Consensus 78 ~daDvVVitAG~~~k~ 93 (323)
T TIGR01759 78 KDVDAALLVGAFPRKP 93 (323)
T ss_pred CCCCEEEEeCCCCCCC
Confidence 8999999999975433
|
This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms. |
| >PRK08328 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.014 Score=55.33 Aligned_cols=102 Identities=11% Similarity=0.104 Sum_probs=65.0
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh--------------------HHHHHHHHhCCCCCCCc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT--------------------RVKQALQWASPSHSLSI 69 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~--------------------kl~~~~~~l~~~~~~~~ 69 (420)
..+|+|+|+ |.+|..+++.|++.|- -++.+++.+.- |.+...+.+.. ..+++
T Consensus 27 ~~~VlIiG~-GGlGs~ia~~La~~Gv------g~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~-~np~v 98 (231)
T PRK08328 27 KAKVAVVGV-GGLGSPVAYYLAAAGV------GRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLER-FNSDI 98 (231)
T ss_pred CCcEEEECC-CHHHHHHHHHHHHcCC------CEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHH-hCCCC
Confidence 457999997 7799999999999983 46777774421 21111112211 01233
Q ss_pred cE--EEEeCCCHHHHHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecC
Q 014694 70 PI--LTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 70 ~~--i~~D~~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdis 121 (420)
.+ +...+ +++.+.++++++|+||.|...+. ....+-++|.+.++.+|+..
T Consensus 99 ~v~~~~~~~-~~~~~~~~l~~~D~Vid~~d~~~-~r~~l~~~~~~~~ip~i~g~ 150 (231)
T PRK08328 99 KIETFVGRL-SEENIDEVLKGVDVIVDCLDNFE-TRYLLDDYAHKKGIPLVHGA 150 (231)
T ss_pred EEEEEeccC-CHHHHHHHHhcCCEEEECCCCHH-HHHHHHHHHHHcCCCEEEEe
Confidence 33 33334 45667888999999999987532 22445678999998887643
|
|
| >PRK05597 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.013 Score=59.11 Aligned_cols=102 Identities=10% Similarity=0.002 Sum_probs=69.5
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh-------------------hHHHHHHHHhCCCCCCCc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-------------------TRVKQALQWASPSHSLSI 69 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~-------------------~kl~~~~~~l~~~~~~~~ 69 (420)
+..+|+|+|+ |.+|..++++|+..|- -++.+++.+. .|.+.+.+.+.. ..+.+
T Consensus 27 ~~~~VlivG~-GGlGs~~a~~La~~Gv------g~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~-~np~v 98 (355)
T PRK05597 27 FDAKVAVIGA-GGLGSPALLYLAGAGV------GHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLA-LNPDV 98 (355)
T ss_pred hCCeEEEECC-CHHHHHHHHHHHHcCC------CeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHH-HCCCc
Confidence 3458999998 7799999999999883 4677777542 345445554432 12233
Q ss_pred --cEEEEeCCCHHHHHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEec
Q 014694 70 --PILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDI 120 (420)
Q Consensus 70 --~~i~~D~~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdi 120 (420)
+.+...++ .+.+.++++++|+||.|..-+.. -.-+-++|.+.++.+|..
T Consensus 99 ~v~~~~~~i~-~~~~~~~~~~~DvVvd~~d~~~~-r~~~n~~c~~~~ip~v~~ 149 (355)
T PRK05597 99 KVTVSVRRLT-WSNALDELRDADVILDGSDNFDT-RHLASWAAARLGIPHVWA 149 (355)
T ss_pred EEEEEEeecC-HHHHHHHHhCCCEEEECCCCHHH-HHHHHHHHHHcCCCEEEE
Confidence 33444553 46677889999999999875432 134668999999987764
|
|
| >TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.015 Score=58.10 Aligned_cols=86 Identities=13% Similarity=0.068 Sum_probs=49.6
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhH--HHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR--VKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~k--l~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
+|.|+||+|.+|..++..|+..+-......+.+.+.++++.+ ++....++.. ...... ..+.-.....+.++++
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~a~g~~~Dl~d---~~~~~~-~~~~~~~~~~~~~~~a 76 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKVLEGVVMELMD---CAFPLL-DGVVPTHDPAVAFTDV 76 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccccceeEeehhc---ccchhc-CceeccCChHHHhCCC
Confidence 589999999999999999987542100001368999986543 3322222211 000000 0000001345778899
Q ss_pred CeeEeccCCCCC
Q 014694 90 KLLLNCVGPYRL 101 (420)
Q Consensus 90 dvVIn~aGp~~~ 101 (420)
|+||+++|.-..
T Consensus 77 DiVVitAG~~~~ 88 (324)
T TIGR01758 77 DVAILVGAFPRK 88 (324)
T ss_pred CEEEEcCCCCCC
Confidence 999999996543
|
This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography |
| >PRK07877 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0087 Score=65.59 Aligned_cols=107 Identities=9% Similarity=0.054 Sum_probs=71.3
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC------------------hhHHHHHHHHhCC-CCCCCc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN------------------PTRVKQALQWASP-SHSLSI 69 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs------------------~~kl~~~~~~l~~-~~~~~~ 69 (420)
++.+|+|+|+ | +|..++.+|++.|-. -++.+++.+ ..|.+.+.+.+.. ....++
T Consensus 106 ~~~~V~IvG~-G-lGs~~a~~LaraGvv-----G~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v 178 (722)
T PRK07877 106 GRLRIGVVGL-S-VGHAIAHTLAAEGLC-----GELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPV 178 (722)
T ss_pred hcCCEEEEEe-c-HHHHHHHHHHHccCC-----CeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEE
Confidence 3457999999 7 999999999998710 256666643 1233333333321 112234
Q ss_pred cEEEEeCCCHHHHHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcH
Q 014694 70 PILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEP 124 (420)
Q Consensus 70 ~~i~~D~~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~ 124 (420)
..+...+ +++.++++++++|+||.|.--+. .-.-+-++|.+.++.+|.-++..
T Consensus 179 ~~~~~~i-~~~n~~~~l~~~DlVvD~~D~~~-~R~~ln~~a~~~~iP~i~~~~~~ 231 (722)
T PRK07877 179 EVFTDGL-TEDNVDAFLDGLDVVVEECDSLD-VKVLLREAARARRIPVLMATSDR 231 (722)
T ss_pred EEEeccC-CHHHHHHHhcCCCEEEECCCCHH-HHHHHHHHHHHcCCCEEEEcCCC
Confidence 4444445 47889999999999999997542 12456689999999988877533
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.015 Score=60.29 Aligned_cols=92 Identities=20% Similarity=0.189 Sum_probs=68.7
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-Hhc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CSQ 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~-~~~ 88 (420)
+.+|+|+|+ |.+|+.+++.|.+.+ .++.++++++++.+.+.++. .++.++.+|.+|++.++++ +++
T Consensus 231 ~~~iiIiG~-G~~g~~l~~~L~~~~-------~~v~vid~~~~~~~~~~~~~-----~~~~~i~gd~~~~~~L~~~~~~~ 297 (453)
T PRK09496 231 VKRVMIVGG-GNIGYYLAKLLEKEG-------YSVKLIERDPERAEELAEEL-----PNTLVLHGDGTDQELLEEEGIDE 297 (453)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCC-------CeEEEEECCHHHHHHHHHHC-----CCCeEEECCCCCHHHHHhcCCcc
Confidence 467999998 999999999998876 78999999999887776643 2567899999999998665 678
Q ss_pred cCeeEeccCCCCCCcHHHHHHHHHcCC
Q 014694 89 TKLLLNCVGPYRLHGDPVAAACVHSGC 115 (420)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~Ac~~~g~ 115 (420)
+|.||.+..-- .....+...|.+.+.
T Consensus 298 a~~vi~~~~~~-~~n~~~~~~~~~~~~ 323 (453)
T PRK09496 298 ADAFIALTNDD-EANILSSLLAKRLGA 323 (453)
T ss_pred CCEEEECCCCc-HHHHHHHHHHHHhCC
Confidence 99998766521 111223344555655
|
|
| >cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.015 Score=53.78 Aligned_cols=103 Identities=12% Similarity=0.247 Sum_probs=66.5
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh---------------------hHHHHHHHHhCCCCCCC
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP---------------------TRVKQALQWASPSHSLS 68 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~---------------------~kl~~~~~~l~~~~~~~ 68 (420)
..+|+|+|+.| +|..+++.|+..|- -++.+++.+. .|.+.+.+.+.. ..+.
T Consensus 19 ~s~VlviG~gg-lGsevak~L~~~GV------g~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~-lNp~ 90 (198)
T cd01485 19 SAKVLIIGAGA-LGAEIAKNLVLAGI------DSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQE-LNPN 90 (198)
T ss_pred hCcEEEECCCH-HHHHHHHHHHHcCC------CEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHH-HCCC
Confidence 45799999866 99999999999983 4566666431 123233333321 1233
Q ss_pred ccE--EEEeCCC-HHHHHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecC
Q 014694 69 IPI--LTADTTD-PPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 69 ~~~--i~~D~~d-~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdis 121 (420)
+++ +..++.+ .+...+.++++|+||.|..+.. .-..+-+.|.+.++.++...
T Consensus 91 v~i~~~~~~~~~~~~~~~~~~~~~dvVi~~~d~~~-~~~~ln~~c~~~~ip~i~~~ 145 (198)
T cd01485 91 VKLSIVEEDSLSNDSNIEEYLQKFTLVIATEENYE-RTAKVNDVCRKHHIPFISCA 145 (198)
T ss_pred CEEEEEecccccchhhHHHHHhCCCEEEECCCCHH-HHHHHHHHHHHcCCCEEEEE
Confidence 443 3333432 4556778899999999877632 23556789999998887764
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol |
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.014 Score=60.33 Aligned_cols=94 Identities=14% Similarity=0.205 Sum_probs=64.8
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
..+|+|+|+ |-+|+.++++|...+. .++.+++|+.++.+.+.++++ .. +.+.+++.+.+.++
T Consensus 182 ~~~vlViGa-G~iG~~~a~~L~~~G~------~~V~v~~r~~~ra~~la~~~g------~~-----~~~~~~~~~~l~~a 243 (423)
T PRK00045 182 GKKVLVIGA-GEMGELVAKHLAEKGV------RKITVANRTLERAEELAEEFG------GE-----AIPLDELPEALAEA 243 (423)
T ss_pred CCEEEEECc-hHHHHHHHHHHHHCCC------CeEEEEeCCHHHHHHHHHHcC------Cc-----EeeHHHHHHHhccC
Confidence 457999987 9999999999988762 378999999999888877663 11 12335667778899
Q ss_pred CeeEeccCCCC-CCcHHHHHHHHHc----CCcEEecC
Q 014694 90 KLLLNCVGPYR-LHGDPVAAACVHS----GCDYLDIS 121 (420)
Q Consensus 90 dvVIn~aGp~~-~~~~~vv~Ac~~~----g~~yvdis 121 (420)
|+||+|.|... ......++.+... ..-.+|++
T Consensus 244 DvVI~aT~s~~~~i~~~~l~~~~~~~~~~~~vviDla 280 (423)
T PRK00045 244 DIVISSTGAPHPIIGKGMVERALKARRHRPLLLVDLA 280 (423)
T ss_pred CEEEECCCCCCcEEcHHHHHHHHhhccCCCeEEEEeC
Confidence 99999987432 2223334443321 23477774
|
|
| >PRK05600 thiamine biosynthesis protein ThiF; Validated | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.016 Score=58.80 Aligned_cols=103 Identities=16% Similarity=0.124 Sum_probs=69.1
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC-------------------hhHHHHHHHHhCC-CCCCC
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASP-SHSLS 68 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs-------------------~~kl~~~~~~l~~-~~~~~ 68 (420)
+..+|+|+|+ |.+|..++++|++.|- -++.+++.+ ..|.+.+.+.+.. ...-+
T Consensus 40 ~~~~VliiG~-GglG~~v~~~La~~Gv------g~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~ 112 (370)
T PRK05600 40 HNARVLVIGA-GGLGCPAMQSLASAGV------GTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIR 112 (370)
T ss_pred cCCcEEEECC-CHHHHHHHHHHHHcCC------CEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCe
Confidence 3457999997 7799999999999883 477777764 2344444444432 01123
Q ss_pred ccEEEEeCCCHHHHHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEec
Q 014694 69 IPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDI 120 (420)
Q Consensus 69 ~~~i~~D~~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdi 120 (420)
+..+...+ +++.+.++++++|+||.|..-+.. -..+-++|.+.++.+|..
T Consensus 113 i~~~~~~i-~~~~~~~~~~~~DlVid~~Dn~~~-r~~in~~~~~~~iP~v~~ 162 (370)
T PRK05600 113 VNALRERL-TAENAVELLNGVDLVLDGSDSFAT-KFLVADAAEITGTPLVWG 162 (370)
T ss_pred eEEeeeec-CHHHHHHHHhCCCEEEECCCCHHH-HHHHHHHHHHcCCCEEEE
Confidence 33444444 456788899999999999876432 234568899999877654
|
|
| >PRK07340 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.003 Score=62.40 Aligned_cols=100 Identities=12% Similarity=0.144 Sum_probs=74.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
.++.|+|+ |..|+..++.++...+ ..++.+.+|+.++.+++.+++.. ..+.+. . +++++++.++|
T Consensus 126 ~~v~IiGa-G~qa~~~~~al~~~~~-----~~~v~v~~r~~~~a~~~a~~~~~---~~~~~~---~---~~~~~av~~aD 190 (304)
T PRK07340 126 GDLLLIGT-GVQARAHLEAFAAGLP-----VRRVWVRGRTAASAAAFCAHARA---LGPTAE---P---LDGEAIPEAVD 190 (304)
T ss_pred CEEEEECC-cHHHHHHHHHHHHhCC-----CCEEEEEcCCHHHHHHHHHHHHh---cCCeeE---E---CCHHHHhhcCC
Confidence 47999986 9999999999986432 15799999999999999888741 122322 2 34567778999
Q ss_pred eeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHHHHH
Q 014694 91 LLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMER 129 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~~~~ 129 (420)
+||+|.... ++++++-.+-|+|..-+....++.++
T Consensus 191 iVitaT~s~----~Pl~~~~~~~g~hi~~iGs~~p~~~E 225 (304)
T PRK07340 191 LVVTATTSR----TPVYPEAARAGRLVVAVGAFTPDMAE 225 (304)
T ss_pred EEEEccCCC----CceeCccCCCCCEEEecCCCCCCccc
Confidence 999988643 45666656788888888777776655
|
|
| >PLN00203 glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.021 Score=60.56 Aligned_cols=97 Identities=16% Similarity=0.204 Sum_probs=66.8
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
..+|+|+|+ |-+|+.++++|...+. .+|.+..|+.++.+.+.++++ +..+... ..+++.+.+.++
T Consensus 266 ~kkVlVIGA-G~mG~~~a~~L~~~G~------~~V~V~nRs~era~~La~~~~-----g~~i~~~---~~~dl~~al~~a 330 (519)
T PLN00203 266 SARVLVIGA-GKMGKLLVKHLVSKGC------TKMVVVNRSEERVAALREEFP-----DVEIIYK---PLDEMLACAAEA 330 (519)
T ss_pred CCEEEEEeC-HHHHHHHHHHHHhCCC------CeEEEEeCCHHHHHHHHHHhC-----CCceEee---cHhhHHHHHhcC
Confidence 457999998 9999999999998762 479999999999988887652 1222222 334567788999
Q ss_pred CeeEeccCCCCC-CcHHHHHHHHHc----C--CcEEecC
Q 014694 90 KLLLNCVGPYRL-HGDPVAAACVHS----G--CDYLDIS 121 (420)
Q Consensus 90 dvVIn~aGp~~~-~~~~vv~Ac~~~----g--~~yvdis 121 (420)
|+||+|.+-... .....++.+... + .-+||++
T Consensus 331 DVVIsAT~s~~pvI~~e~l~~~~~~~~~~~~~~~~IDLA 369 (519)
T PLN00203 331 DVVFTSTSSETPLFLKEHVEALPPASDTVGGKRLFVDIS 369 (519)
T ss_pred CEEEEccCCCCCeeCHHHHHHhhhcccccCCCeEEEEeC
Confidence 999998763222 234455554322 1 2478873
|
|
| >PRK08618 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.0078 Score=60.04 Aligned_cols=101 Identities=13% Similarity=0.148 Sum_probs=71.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
.++.|+|+ |.+|+..++.++.... .-+|.+.+|++++.+++.+++.. ...+++.. + +++++++.++|
T Consensus 128 ~~v~iiGa-G~~a~~~~~al~~~~~-----~~~v~v~~r~~~~a~~~~~~~~~--~~~~~~~~--~---~~~~~~~~~aD 194 (325)
T PRK08618 128 KTLCLIGT-GGQAKGQLEAVLAVRD-----IERVRVYSRTFEKAYAFAQEIQS--KFNTEIYV--V---NSADEAIEEAD 194 (325)
T ss_pred cEEEEECC-cHHHHHHHHHHHhcCC-----ccEEEEECCCHHHHHHHHHHHHH--hcCCcEEE--e---CCHHHHHhcCC
Confidence 46999985 8899998888775421 15899999999999988887641 11233332 2 23567778999
Q ss_pred eeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHHHH
Q 014694 91 LLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFME 128 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~~~ 128 (420)
+||+|..-. .++++.+.+.|+|.+-+-...+.++
T Consensus 195 iVi~aT~s~----~p~i~~~l~~G~hV~~iGs~~p~~~ 228 (325)
T PRK08618 195 IIVTVTNAK----TPVFSEKLKKGVHINAVGSFMPDMQ 228 (325)
T ss_pred EEEEccCCC----CcchHHhcCCCcEEEecCCCCcccc
Confidence 999988532 3555577899999888866655544
|
|
| >smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.0064 Score=51.42 Aligned_cols=98 Identities=12% Similarity=0.183 Sum_probs=59.0
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEE-ecChhHHHHHHHHhCCCCCCCcc-EEEEeCCCHHHHHHHHhcc
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA-GRNPTRVKQALQWASPSHSLSIP-ILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~ia-gRs~~kl~~~~~~l~~~~~~~~~-~i~~D~~d~~sl~~~~~~~ 89 (420)
+|.|+|++|.+|+.+++.|.++.. +++..+ +|+.++.+.+.... .++. ++..++ +.+.++ ..++
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~~~------~~l~av~~~~~~~~~~~~~~~-----~~~~~~~~~~~-~~~~~~--~~~~ 66 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEHPD------FEVVALAASARSAGKRVSEAG-----PHLKGEVVLEL-EPEDFE--ELAV 66 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcCCC------ceEEEEEechhhcCcCHHHHC-----ccccccccccc-ccCChh--hcCC
Confidence 478999999999999999988631 555444 66544433333221 1121 111122 223333 2589
Q ss_pred CeeEeccCCCCCCcHHH---HHHHHHcCCcEEecCCcHH
Q 014694 90 KLLLNCVGPYRLHGDPV---AAACVHSGCDYLDISGEPE 125 (420)
Q Consensus 90 dvVIn~aGp~~~~~~~v---v~Ac~~~g~~yvdisge~~ 125 (420)
|+||-|+++-.. ..+ +..+.+.|..+||+|+...
T Consensus 67 DvV~~~~~~~~~--~~~~~~~~~~~~~g~~viD~s~~~~ 103 (122)
T smart00859 67 DIVFLALPHGVS--KEIAPLLPKAAEAGVKVIDLSSAFR 103 (122)
T ss_pred CEEEEcCCcHHH--HHHHHHHHhhhcCCCEEEECCcccc
Confidence 999999976432 222 2345578999999997654
|
The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase. |
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.012 Score=58.08 Aligned_cols=94 Identities=15% Similarity=0.209 Sum_probs=63.4
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
...+++|+|+ |.+|+.+++.|.+.+ .+|.+.+|+.++.+.. ++++ ... . +.+++.+.+++
T Consensus 151 ~g~kvlViG~-G~iG~~~a~~L~~~G-------a~V~v~~r~~~~~~~~-~~~G------~~~--~---~~~~l~~~l~~ 210 (296)
T PRK08306 151 HGSNVLVLGF-GRTGMTLARTLKALG-------ANVTVGARKSAHLARI-TEMG------LSP--F---HLSELAEEVGK 210 (296)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHH-HHcC------Cee--e---cHHHHHHHhCC
Confidence 3468999997 889999999999887 7899999998776443 3332 221 1 23567888899
Q ss_pred cCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcH
Q 014694 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEP 124 (420)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~ 124 (420)
+|+||||+.+.. .....++.+ ..+.-.+|++..+
T Consensus 211 aDiVI~t~p~~~-i~~~~l~~~-~~g~vIIDla~~p 244 (296)
T PRK08306 211 IDIIFNTIPALV-LTKEVLSKM-PPEALIIDLASKP 244 (296)
T ss_pred CCEEEECCChhh-hhHHHHHcC-CCCcEEEEEccCC
Confidence 999999985421 122333222 3456678876443
|
|
| >PRK13302 putative L-aspartate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.028 Score=54.68 Aligned_cols=104 Identities=19% Similarity=0.219 Sum_probs=70.2
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceE-EEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v-~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
.+++|-|+|. |.+|+.+++.|.+..+ .+++ .+.+|++++.+++.++++. .. . ..+ +++++.
T Consensus 5 ~~irIGIIG~-G~IG~~~a~~L~~~~~-----~~el~aV~dr~~~~a~~~a~~~g~-----~~--~--~~~---~eell~ 66 (271)
T PRK13302 5 PELRVAIAGL-GAIGKAIAQALDRGLP-----GLTLSAVAVRDPQRHADFIWGLRR-----PP--P--VVP---LDQLAT 66 (271)
T ss_pred CeeEEEEECc-cHHHHHHHHHHHhcCC-----CeEEEEEECCCHHHHHHHHHhcCC-----Cc--c--cCC---HHHHhc
Confidence 3578999985 9999999999987411 1565 4788998888777665430 01 0 123 445567
Q ss_pred ccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecC-CcHHHHHHHHH
Q 014694 88 QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS-GEPEFMERMEA 132 (420)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdis-ge~~~~~~~~~ 132 (420)
++|+|+-|+.+... ..++..|.++|.|.+..+ +...-.+++++
T Consensus 67 ~~D~Vvi~tp~~~h--~e~~~~aL~aGk~Vi~~s~gal~~~~~L~~ 110 (271)
T PRK13302 67 HADIVVEAAPASVL--RAIVEPVLAAGKKAIVLSVGALLRNEDLID 110 (271)
T ss_pred CCCEEEECCCcHHH--HHHHHHHHHcCCcEEEecchhHHhHHHHHH
Confidence 89999999876433 677888899999977655 33333345544
|
|
| >KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.017 Score=58.25 Aligned_cols=102 Identities=17% Similarity=0.251 Sum_probs=66.6
Q ss_pred CCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 014694 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 7 ~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
......|||+||+|.+|+.+++-+...+ ....++.++.+++ ++.++++. -...|..|++-++++.
T Consensus 155 ~~~g~~vLv~ggsggVG~~aiQlAk~~~-------~~~v~t~~s~e~~-~l~k~lGA-------d~vvdy~~~~~~e~~k 219 (347)
T KOG1198|consen 155 LSKGKSVLVLGGSGGVGTAAIQLAKHAG-------AIKVVTACSKEKL-ELVKKLGA-------DEVVDYKDENVVELIK 219 (347)
T ss_pred cCCCCeEEEEeCCcHHHHHHHHHHHhcC-------CcEEEEEcccchH-HHHHHcCC-------cEeecCCCHHHHHHHH
Confidence 3445689999999999999987765554 3566677777777 56666652 2356888866666655
Q ss_pred h----ccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcH
Q 014694 87 S----QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEP 124 (420)
Q Consensus 87 ~----~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~ 124 (420)
+ +.|+|+.|+|.-.. ...+...+...+..||-+.|+.
T Consensus 220 k~~~~~~DvVlD~vg~~~~-~~~~~~l~~~g~~~~i~~~~~~ 260 (347)
T KOG1198|consen 220 KYTGKGVDVVLDCVGGSTL-TKSLSCLLKGGGGAYIGLVGDE 260 (347)
T ss_pred hhcCCCccEEEECCCCCcc-ccchhhhccCCceEEEEecccc
Confidence 5 48999999997322 1223333333344566665543
|
|
| >PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.016 Score=60.88 Aligned_cols=70 Identities=17% Similarity=0.218 Sum_probs=50.8
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
+..+++|+|+ |.+|+.++..|++.+ .++.+.+|+.++.+++.+.+. ... .+..+ +.. +.+
T Consensus 331 ~~k~vlIiGa-GgiG~aia~~L~~~G-------~~V~i~~R~~~~~~~la~~~~------~~~--~~~~~---~~~-l~~ 390 (477)
T PRK09310 331 NNQHVAIVGA-GGAAKAIATTLARAG-------AELLIFNRTKAHAEALASRCQ------GKA--FPLES---LPE-LHR 390 (477)
T ss_pred CCCEEEEEcC-cHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhc------cce--echhH---hcc-cCC
Confidence 3457999996 899999999999987 688899999998887776542 111 12222 222 467
Q ss_pred cCeeEeccCC
Q 014694 89 TKLLLNCVGP 98 (420)
Q Consensus 89 ~dvVIn~aGp 98 (420)
+|+||||...
T Consensus 391 ~DiVInatP~ 400 (477)
T PRK09310 391 IDIIINCLPP 400 (477)
T ss_pred CCEEEEcCCC
Confidence 9999999854
|
|
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.0079 Score=58.05 Aligned_cols=82 Identities=18% Similarity=0.184 Sum_probs=61.3
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhH--HHHH-HHHhCCCCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR--VKQA-LQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~k--l~~~-~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
..+|+|-||+-|..+++.|++.| +.|..+.|..+. ...+ +-++......++.++.+|++|..+|.++++
T Consensus 4 ~ALITGITGQDGsYLa~lLLekG-------Y~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~ 76 (345)
T COG1089 4 VALITGITGQDGSYLAELLLEKG-------YEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEE 76 (345)
T ss_pred eEEEecccCCchHHHHHHHHhcC-------cEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHh
Confidence 57999999999999999999998 888877775321 1111 111111123457789999999999999998
Q ss_pred -ccCeeEeccCCCC
Q 014694 88 -QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -~~dvVIn~aGp~~ 100 (420)
+.|.|.|.++..+
T Consensus 77 v~PdEIYNLaAQS~ 90 (345)
T COG1089 77 VQPDEIYNLAAQSH 90 (345)
T ss_pred cCchhheecccccc
Confidence 5789999998654
|
|
| >PRK08655 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.013 Score=60.96 Aligned_cols=91 Identities=15% Similarity=0.220 Sum_probs=64.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
|+|.|+||+|.+|..+++.|.+.+ ++|.+.+|++++..+...+++ +. . ..+..+.+.++|
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G-------~~V~v~~r~~~~~~~~a~~~g------v~-----~--~~~~~e~~~~aD 60 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKG-------FEVIVTGRDPKKGKEVAKELG------VE-----Y--ANDNIDAAKDAD 60 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCC-------CEEEEEECChHHHHHHHHHcC------Ce-----e--ccCHHHHhccCC
Confidence 479999999999999999999887 789999999888766655442 11 1 122455678899
Q ss_pred eeEeccCCCCCCcHHHHHHHH---HcCCcEEecCCc
Q 014694 91 LLLNCVGPYRLHGDPVAAACV---HSGCDYLDISGE 123 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~Ac~---~~g~~yvdisge 123 (420)
+||-|+.+... ..+++... ..++-++|+++-
T Consensus 61 vVIlavp~~~~--~~vl~~l~~~l~~~~iViDvsSv 94 (437)
T PRK08655 61 IVIISVPINVT--EDVIKEVAPHVKEGSLLMDVTSV 94 (437)
T ss_pred EEEEecCHHHH--HHHHHHHHhhCCCCCEEEEcccc
Confidence 99998865322 34444433 345568888863
|
|
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.025 Score=58.43 Aligned_cols=94 Identities=14% Similarity=0.191 Sum_probs=66.1
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
..+|+|+|+ |-+|+.++++|...+. .+|.+.+|+.++.+++.++++. ..+ +.+++.+.+.++
T Consensus 180 ~~~VlViGa-G~iG~~~a~~L~~~G~------~~V~v~~rs~~ra~~la~~~g~------~~i-----~~~~l~~~l~~a 241 (417)
T TIGR01035 180 GKKALLIGA-GEMGELVAKHLLRKGV------GKILIANRTYERAEDLAKELGG------EAV-----KFEDLEEYLAEA 241 (417)
T ss_pred CCEEEEECC-hHHHHHHHHHHHHCCC------CEEEEEeCCHHHHHHHHHHcCC------eEe-----eHHHHHHHHhhC
Confidence 357999997 9999999999998762 5799999999998778776641 111 235677888899
Q ss_pred CeeEeccCCCC-CCcHHHHHHHHHcC---CcEEecC
Q 014694 90 KLLLNCVGPYR-LHGDPVAAACVHSG---CDYLDIS 121 (420)
Q Consensus 90 dvVIn~aGp~~-~~~~~vv~Ac~~~g---~~yvdis 121 (420)
|+||.|.+-.. ......++.+...+ .-.+|++
T Consensus 242 DvVi~aT~s~~~ii~~e~l~~~~~~~~~~~~viDla 277 (417)
T TIGR01035 242 DIVISSTGAPHPIVSKEDVERALRERTRPLFIIDIA 277 (417)
T ss_pred CEEEECCCCCCceEcHHHHHHHHhcCCCCeEEEEeC
Confidence 99999987432 22344555544322 2467774
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
| >PRK14851 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.019 Score=62.67 Aligned_cols=105 Identities=11% Similarity=0.108 Sum_probs=70.3
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC-------------------hhHHHHHHHHhCC-CCCCC
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASP-SHSLS 68 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs-------------------~~kl~~~~~~l~~-~~~~~ 68 (420)
+..+|+|.|+ |.+|..+++.|++.|- -++.+++-+ ..|.+.+.+.+.. ....+
T Consensus 42 ~~~~VlIvG~-GGlGs~va~~Lar~GV------G~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~ 114 (679)
T PRK14851 42 AEAKVAIPGM-GGVGGVHLITMVRTGI------GRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLE 114 (679)
T ss_pred hcCeEEEECc-CHHHHHHHHHHHHhCC------CeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCe
Confidence 3458999996 7799999999999983 356666632 1344333333321 11223
Q ss_pred ccEEEEeCCCHHHHHHHHhccCeeEeccCCCCC-CcHHHHHHHHHcCCcEEecC
Q 014694 69 IPILTADTTDPPSLHRLCSQTKLLLNCVGPYRL-HGDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 69 ~~~i~~D~~d~~sl~~~~~~~dvVIn~aGp~~~-~~~~vv~Ac~~~g~~yvdis 121 (420)
+..+...+ +++.+.++++++|+||+|.-.+.. ....+.++|.+.++.+|...
T Consensus 115 I~~~~~~i-~~~n~~~~l~~~DvVid~~D~~~~~~r~~l~~~c~~~~iP~i~~g 167 (679)
T PRK14851 115 ITPFPAGI-NADNMDAFLDGVDVVLDGLDFFQFEIRRTLFNMAREKGIPVITAG 167 (679)
T ss_pred EEEEecCC-ChHHHHHHHhCCCEEEECCCCCcHHHHHHHHHHHHHCCCCEEEee
Confidence 44455556 457788999999999999865432 22467889999999887653
|
|
| >TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating) | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.045 Score=53.89 Aligned_cols=92 Identities=16% Similarity=0.096 Sum_probs=58.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
|+|-|+|. |.+|..+++.|++++ ++|.+.+|++++.+.+.+.-. . ...+.+++.+.+.++|
T Consensus 1 M~Ig~IGl-G~mG~~la~~L~~~g-------~~V~~~dr~~~~~~~l~~~g~-------~----~~~s~~~~~~~~~~~d 61 (298)
T TIGR00872 1 MQLGLIGL-GRMGANIVRRLAKRG-------HDCVGYDHDQDAVKAMKEDRT-------T----GVANLRELSQRLSAPR 61 (298)
T ss_pred CEEEEEcc-hHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHcCC-------c----ccCCHHHHHhhcCCCC
Confidence 46889985 999999999999987 789999999999877664211 0 1124445555556677
Q ss_pred eeEeccCCCCCCcHHHHHHHH---HcCCcEEecCCc
Q 014694 91 LLLNCVGPYRLHGDPVAAACV---HSGCDYLDISGE 123 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~Ac~---~~g~~yvdisge 123 (420)
+||-|+-+. .-..+++... ..|.-+||.+..
T Consensus 62 vIi~~vp~~--~~~~v~~~l~~~l~~g~ivid~st~ 95 (298)
T TIGR00872 62 VVWVMVPHG--IVDAVLEELAPTLEKGDIVIDGGNS 95 (298)
T ss_pred EEEEEcCch--HHHHHHHHHHhhCCCCCEEEECCCC
Confidence 777776442 1233333322 234446666543
|
This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle. |
| >TIGR01915 npdG NADPH-dependent F420 reductase | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.019 Score=53.91 Aligned_cols=78 Identities=15% Similarity=0.136 Sum_probs=53.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~-~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
|+|.|+||+|.+|..++..|++.+ ++|.+.+|++++++.+.+..... ....+... +-..+ ..+.++++
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G-------~~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~~-~~~~~---~~ea~~~a 69 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAG-------NKIIIGSRDLEKAEEAAAKALEELGHGGSDIK-VTGAD---NAEAAKRA 69 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCC-------CEEEEEEcCHHHHHHHHHHHHhhccccCCCce-EEEeC---hHHHHhcC
Confidence 579999999999999999999987 68888999999887766543100 00111110 11112 24557789
Q ss_pred CeeEeccCCC
Q 014694 90 KLLLNCVGPY 99 (420)
Q Consensus 90 dvVIn~aGp~ 99 (420)
|+||-++-+.
T Consensus 70 DvVilavp~~ 79 (219)
T TIGR01915 70 DVVILAVPWD 79 (219)
T ss_pred CEEEEECCHH
Confidence 9999988654
|
This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase. |
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.009 Score=58.91 Aligned_cols=33 Identities=9% Similarity=-0.074 Sum_probs=28.7
Q ss_pred ceEEEEcCC--cHHHHHHHHHHHHhCCCCCCCcceEEEEecC
Q 014694 11 FDVIILGAS--GFTGKYVVREALKLFNFPSSPIKSLALAGRN 50 (420)
Q Consensus 11 ~~IvV~GAT--G~~G~~va~~L~~~~~~~~~~~~~v~iagRs 50 (420)
..++||||+ ..||+.+++.|+++| .+|++.+|.
T Consensus 9 k~alITGa~~~~GIG~a~A~~la~~G-------a~Vvv~~~~ 43 (299)
T PRK06300 9 KIAFIAGIGDDQGYGWGIAKALAEAG-------ATILVGTWV 43 (299)
T ss_pred CEEEEeCCCCCCCHHHHHHHHHHHCC-------CEEEEEecc
Confidence 369999995 789999999999998 899987654
|
|
| >PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.016 Score=55.65 Aligned_cols=96 Identities=13% Similarity=0.222 Sum_probs=70.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--c
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--Q 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--~ 88 (420)
|+|+|+|||+ =|+.+++.|.+.+ . +.+..-..-.. ++... ......++.+-+.|.+.+.++++ +
T Consensus 1 m~ILvlgGTt-E~r~la~~L~~~g-------~-v~~sv~t~~g~-~~~~~----~~~~~~v~~G~lg~~~~l~~~l~~~~ 66 (249)
T PF02571_consen 1 MKILVLGGTT-EGRKLAERLAEAG-------Y-VIVSVATSYGG-ELLKP----ELPGLEVRVGRLGDEEGLAEFLRENG 66 (249)
T ss_pred CEEEEEechH-HHHHHHHHHHhcC-------C-EEEEEEhhhhH-hhhcc----ccCCceEEECCCCCHHHHHHHHHhCC
Confidence 6899999997 5999999999987 4 33222221111 11110 11345677777769999999996 6
Q ss_pred cCeeEeccCCCCC-CcHHHHHHHHHcCCcEEec
Q 014694 89 TKLLLNCVGPYRL-HGDPVAAACVHSGCDYLDI 120 (420)
Q Consensus 89 ~dvVIn~aGp~~~-~~~~vv~Ac~~~g~~yvdi 120 (420)
.+.||.+.-||.. ...++.+||.+.|+.|+-+
T Consensus 67 i~~vIDATHPfA~~is~na~~a~~~~~ipylR~ 99 (249)
T PF02571_consen 67 IDAVIDATHPFAAEISQNAIEACRELGIPYLRF 99 (249)
T ss_pred CcEEEECCCchHHHHHHHHHHHHhhcCcceEEE
Confidence 8999999999864 3689999999999999987
|
Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process |
| >cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.021 Score=54.17 Aligned_cols=103 Identities=13% Similarity=0.154 Sum_probs=67.4
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh-------------------hHHHHHHHHhCCCCCCCcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-------------------TRVKQALQWASPSHSLSIP 70 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~-------------------~kl~~~~~~l~~~~~~~~~ 70 (420)
..+|+|+|. |.+|..+++.|++.|- -++.+++.+. .|.+.+.+.+.. -.+.++
T Consensus 11 ~~~VlVvG~-GGvGs~va~~Lar~GV------g~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~-inP~~~ 82 (231)
T cd00755 11 NAHVAVVGL-GGVGSWAAEALARSGV------GKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRD-INPECE 82 (231)
T ss_pred CCCEEEECC-CHHHHHHHHHHHHcCC------CEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHH-HCCCcE
Confidence 457999987 7799999999999983 4677766431 233333433321 112333
Q ss_pred E--EEEeCCCHHHHHHHHh-ccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCC
Q 014694 71 I--LTADTTDPPSLHRLCS-QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISG 122 (420)
Q Consensus 71 ~--i~~D~~d~~sl~~~~~-~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisg 122 (420)
+ +...+ +++.+..++. +.|+||.|...... -..+.+.|.++++.+|..-|
T Consensus 83 V~~~~~~i-~~~~~~~l~~~~~D~VvdaiD~~~~-k~~L~~~c~~~~ip~I~s~g 135 (231)
T cd00755 83 VDAVEEFL-TPDNSEDLLGGDPDFVVDAIDSIRA-KVALIAYCRKRKIPVISSMG 135 (231)
T ss_pred EEEeeeec-CHhHHHHHhcCCCCEEEEcCCCHHH-HHHHHHHHHHhCCCEEEEeC
Confidence 3 33333 3456666664 69999999875432 25688999999999888755
|
coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.022 Score=60.67 Aligned_cols=70 Identities=19% Similarity=0.133 Sum_probs=50.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-Hhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~-~~~~ 89 (420)
.+++|+|| |.+|+.++..|++.+ .+|.++.|+.++.+.+.+++. ... .+.. ++.+. ...+
T Consensus 380 k~vlIlGa-GGagrAia~~L~~~G-------~~V~i~nR~~e~a~~la~~l~------~~~--~~~~---~~~~~~~~~~ 440 (529)
T PLN02520 380 KLFVVIGA-GGAGKALAYGAKEKG-------ARVVIANRTYERAKELADAVG------GQA--LTLA---DLENFHPEEG 440 (529)
T ss_pred CEEEEECC-cHHHHHHHHHHHHCC-------CEEEEEcCCHHHHHHHHHHhC------Cce--eeHh---HhhhhccccC
Confidence 47999998 799999999999987 689999999999988877653 111 1222 22222 2357
Q ss_pred CeeEeccCCC
Q 014694 90 KLLLNCVGPY 99 (420)
Q Consensus 90 dvVIn~aGp~ 99 (420)
|+||||...-
T Consensus 441 diiINtT~vG 450 (529)
T PLN02520 441 MILANTTSVG 450 (529)
T ss_pred eEEEecccCC
Confidence 8999988643
|
|
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.011 Score=55.38 Aligned_cols=85 Identities=14% Similarity=0.180 Sum_probs=62.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~-- 88 (420)
++|+|+|++|.+|++|.+-+...+.+ +-+|...+.. .+|+++.++.++++++
T Consensus 2 ~kIlVtGg~GLVGsAi~~vv~~q~~~----~e~wvf~~sk----------------------d~DLt~~a~t~~lF~~ek 55 (315)
T KOG1431|consen 2 KKILVTGGTGLVGSAIVKVVQEQGFD----DENWVFIGSK----------------------DADLTNLADTRALFESEK 55 (315)
T ss_pred ceEEEecCCchHHHHHHHHHHhcCCC----CcceEEeccc----------------------cccccchHHHHHHHhccC
Confidence 47999999999999999999888742 2578877642 2578888888888875
Q ss_pred cCeeEeccCC----CCC-------------CcHHHHHHHHHcCCcEEecC
Q 014694 89 TKLLLNCVGP----YRL-------------HGDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 89 ~dvVIn~aGp----~~~-------------~~~~vv~Ac~~~g~~yvdis 121 (420)
...|||.|+- ++. ...+++..|-+.|+.-+-.|
T Consensus 56 PthVIhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsc 105 (315)
T KOG1431|consen 56 PTHVIHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSC 105 (315)
T ss_pred CceeeehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhh
Confidence 4567887752 221 13788889999888544333
|
|
| >cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.06 Score=53.21 Aligned_cols=77 Identities=17% Similarity=0.203 Sum_probs=54.0
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCC---CCCCccEEEEeCCCHHHHHHHHhc
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS---HSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~---~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
+|.|+|+ |.+|+.++..|+..+.. .++.+.+|+.++++.+..++... ......+ . ..+.+ .+++
T Consensus 2 kI~IIGa-G~vG~~~a~~l~~~g~~-----~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i-~--~~~~~----~l~~ 68 (306)
T cd05291 2 KVVIIGA-GHVGSSFAYSLVNQGIA-----DELVLIDINEEKAEGEALDLEDALAFLPSPVKI-K--AGDYS----DCKD 68 (306)
T ss_pred EEEEECC-CHHHHHHHHHHHhcCCC-----CEEEEEeCCcchhhHhHhhHHHHhhccCCCeEE-E--cCCHH----HhCC
Confidence 6999996 99999999999987621 37999999999988777766320 0111112 2 22322 3589
Q ss_pred cCeeEeccCCCCC
Q 014694 89 TKLLLNCVGPYRL 101 (420)
Q Consensus 89 ~dvVIn~aGp~~~ 101 (420)
+|+||+++|.-..
T Consensus 69 aDIVIitag~~~~ 81 (306)
T cd05291 69 ADIVVITAGAPQK 81 (306)
T ss_pred CCEEEEccCCCCC
Confidence 9999999996543
|
L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine |
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.033 Score=48.21 Aligned_cols=98 Identities=16% Similarity=0.151 Sum_probs=75.8
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
+..+|+++|. | .|..+++.|.+.+ .+|..++.++...+...+. .+.++..|+.+++ -++-++
T Consensus 16 ~~~kileIG~-G-fG~~vA~~L~~~G-------~~ViaIDi~~~aV~~a~~~-------~~~~v~dDlf~p~--~~~y~~ 77 (134)
T PRK04148 16 KNKKIVELGI-G-FYFKVAKKLKESG-------FDVIVIDINEKAVEKAKKL-------GLNAFVDDLFNPN--LEIYKN 77 (134)
T ss_pred cCCEEEEEEe-c-CCHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHh-------CCeEEECcCCCCC--HHHHhc
Confidence 3467999986 6 7899999999887 8999999999987665442 3688999999876 366788
Q ss_pred cCeeEeccCCCCCCcHHHHHHHHHcCCcE--EecCCcHH
Q 014694 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDY--LDISGEPE 125 (420)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~Ac~~~g~~y--vdisge~~ 125 (420)
+|+|..+--|-.. -.++++.+.+.+++. ..++||.+
T Consensus 78 a~liysirpp~el-~~~~~~la~~~~~~~~i~~l~~e~~ 115 (134)
T PRK04148 78 AKLIYSIRPPRDL-QPFILELAKKINVPLIIKPLSGEEP 115 (134)
T ss_pred CCEEEEeCCCHHH-HHHHHHHHHHcCCCEEEEcCCCCCC
Confidence 9998877655433 378899999999974 44777763
|
|
| >cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1 | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.026 Score=52.26 Aligned_cols=101 Identities=13% Similarity=0.175 Sum_probs=63.9
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC-------------------hhHHHHHHHHhCCCCCCCcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASPSHSLSIP 70 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs-------------------~~kl~~~~~~l~~~~~~~~~ 70 (420)
..+|+|.|+.| +|..+++.|+..|- -++.+.+.+ ..|.+.+.+.+.. ..+.+.
T Consensus 21 ~s~VlIiG~gg-lG~evak~La~~GV------g~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~-lNp~v~ 92 (197)
T cd01492 21 SARILLIGLKG-LGAEIAKNLVLSGI------GSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRA-LNPRVK 92 (197)
T ss_pred hCcEEEEcCCH-HHHHHHHHHHHcCC------CEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHH-HCCCCE
Confidence 45799999855 99999999999983 456666643 1233333333321 112333
Q ss_pred --EEEEeCCCHHHHHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecC
Q 014694 71 --ILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 71 --~i~~D~~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdis 121 (420)
.+...+. +...+.++++|+||.|..+.. .-..+-+.|.+.++.++...
T Consensus 93 i~~~~~~~~--~~~~~~~~~~dvVi~~~~~~~-~~~~ln~~c~~~~ip~i~~~ 142 (197)
T cd01492 93 VSVDTDDIS--EKPEEFFSQFDVVVATELSRA-ELVKINELCRKLGVKFYATG 142 (197)
T ss_pred EEEEecCcc--ccHHHHHhCCCEEEECCCCHH-HHHHHHHHHHHcCCCEEEEE
Confidence 3333333 234567889999998876532 23556788999998876653
|
Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain. |
| >cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.029 Score=54.13 Aligned_cols=83 Identities=11% Similarity=0.043 Sum_probs=55.9
Q ss_pred EEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccCee
Q 014694 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKLL 92 (420)
Q Consensus 13 IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~dvV 92 (420)
|.|+||+|.+|..++..|+..+.. ...++.+.++++++++....++..-...... ...-. ..++.+.++++|+|
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~---~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~-~~i~~--~~d~~~~~~~aDiV 74 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVL---LAIELVLYDIDEEKLKGVAMDLQDAVEPLAD-IKVSI--TDDPYEAFKDADVV 74 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCC---cceEEEEEeCCcccchHHHHHHHHhhhhccC-cEEEE--CCchHHHhCCCCEE
Confidence 578999999999999999887610 0158999999998887777666420001101 11111 12356778999999
Q ss_pred EeccCCCCC
Q 014694 93 LNCVGPYRL 101 (420)
Q Consensus 93 In~aGp~~~ 101 (420)
|.++|.-..
T Consensus 75 v~t~~~~~~ 83 (263)
T cd00650 75 IITAGVGRK 83 (263)
T ss_pred EECCCCCCC
Confidence 999986543
|
Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains |
| >PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.017 Score=58.43 Aligned_cols=100 Identities=12% Similarity=0.118 Sum_probs=62.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
++|-|.||||++|+.+.+.++++.. + +..++..+..+.+.- .. ..+ .+-.....++.|+++ ++++|
T Consensus 2 ~~VAIVGATG~vG~ell~llL~~~~--f-~~~~l~~~ss~~sg~-~~-~~f-----~g~~~~v~~~~~~~~----~~~~D 67 (369)
T PRK06598 2 KKVGFVGWRGMVGSVLMQRMVEEND--F-DLIEPVFFSTSQAGG-AA-PSF-----GGKEGTLQDAFDIDA----LKKLD 67 (369)
T ss_pred eEEEEEeCCCHHHHHHHHHHHhCCC--C-CcCcEEEecchhhCC-cc-ccc-----CCCcceEEecCChhH----hcCCC
Confidence 5799999999999999997887752 1 011244444322111 11 111 111234445555444 36799
Q ss_pred eeEeccCCCCCCcHHHHHHHHHcCCc--EEecCCcHHH
Q 014694 91 LLLNCVGPYRLHGDPVAAACVHSGCD--YLDISGEPEF 126 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~Ac~~~g~~--yvdisge~~~ 126 (420)
+|+.++|.- ....+...+.++|+. .||.|+....
T Consensus 68 ivf~a~~~~--~s~~~~~~~~~aG~~~~VID~Ss~fR~ 103 (369)
T PRK06598 68 IIITCQGGD--YTNEVYPKLRAAGWQGYWIDAASTLRM 103 (369)
T ss_pred EEEECCCHH--HHHHHHHHHHhCCCCeEEEECChHHhC
Confidence 999998643 447777878889954 9999987643
|
|
| >PRK08300 acetaldehyde dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.034 Score=54.71 Aligned_cols=98 Identities=15% Similarity=0.173 Sum_probs=65.5
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceE-EEEecChhHH-HHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNPTRV-KQALQWASPSHSLSIPILTADTTDPPSLHRL- 85 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v-~iagRs~~kl-~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~- 85 (420)
++++|-|+| +|.+|+..+..+.+.. . +++ .++++++++. .+..++++ +... ..+.+.+.+.
T Consensus 3 ~klrVAIIG-tG~IGt~hm~~l~~~~--~----velvAVvdid~es~gla~A~~~G------i~~~---~~~ie~LL~~~ 66 (302)
T PRK08300 3 SKLKVAIIG-SGNIGTDLMIKILRSE--H----LEPGAMVGIDPESDGLARARRLG------VATS---AEGIDGLLAMP 66 (302)
T ss_pred CCCeEEEEc-CcHHHHHHHHHHhcCC--C----cEEEEEEeCChhhHHHHHHHHcC------CCcc---cCCHHHHHhCc
Confidence 568999999 8999999888887742 1 454 6778887642 23344332 2211 1233434332
Q ss_pred -HhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcH
Q 014694 86 -CSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEP 124 (420)
Q Consensus 86 -~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~ 124 (420)
+.+.|+|+.+++.... ......+.++|+|.||.+.-.
T Consensus 67 ~~~dIDiVf~AT~a~~H--~e~a~~a~eaGk~VID~sPA~ 104 (302)
T PRK08300 67 EFDDIDIVFDATSAGAH--VRHAAKLREAGIRAIDLTPAA 104 (302)
T ss_pred CCCCCCEEEECCCHHHH--HHHHHHHHHcCCeEEECCccc
Confidence 2568999999886533 677888899999999998554
|
|
| >cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.032 Score=55.27 Aligned_cols=82 Identities=17% Similarity=0.039 Sum_probs=53.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
|+|.|+||+|.+|..++-.|+..+-. .++++.+.+ +++...-+|.. ......+..+. ..+++.+.++++|
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~~-----~elvLiDi~--~a~g~alDL~~-~~~~~~i~~~~--~~~~~y~~~~daD 70 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPLV-----SELALYDIV--NTPGVAADLSH-INTPAKVTGYL--GPEELKKALKGAD 70 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCC-----cEEEEEecC--ccceeehHhHh-CCCcceEEEec--CCCchHHhcCCCC
Confidence 58999999999999999988776521 478999988 44433333431 11112222111 1233667889999
Q ss_pred eeEeccCCCCCC
Q 014694 91 LLLNCVGPYRLH 102 (420)
Q Consensus 91 vVIn~aGp~~~~ 102 (420)
+||-++|.-...
T Consensus 71 ivvitaG~~~k~ 82 (310)
T cd01337 71 VVVIPAGVPRKP 82 (310)
T ss_pred EEEEeCCCCCCC
Confidence 999999975443
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.024 Score=53.04 Aligned_cols=101 Identities=17% Similarity=0.293 Sum_probs=70.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
++|.|.|. |.||+.+++.+... +-+ .-.+++.+|+.+|.+++...+.. ++. .++++++...|
T Consensus 1 l~vgiVGc-GaIG~~l~e~v~~~-~~~---~e~v~v~D~~~ek~~~~~~~~~~----------~~~---s~ide~~~~~D 62 (255)
T COG1712 1 LKVGIVGC-GAIGKFLLELVRDG-RVD---FELVAVYDRDEEKAKELEASVGR----------RCV---SDIDELIAEVD 62 (255)
T ss_pred CeEEEEec-cHHHHHHHHHHhcC-Ccc---eeEEEEecCCHHHHHHHHhhcCC----------Ccc---ccHHHHhhccc
Confidence 46788875 99999999887643 111 13568889999999887766531 112 34667778999
Q ss_pred eeEeccCCCCCCcHHHHHHHHHcCCcEEecC----CcHHHHHHHH
Q 014694 91 LLLNCVGPYRLHGDPVAAACVHSGCDYLDIS----GEPEFMERME 131 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~Ac~~~g~~yvdis----ge~~~~~~~~ 131 (420)
+|+-||++-.. ...+.-+.++|.|++.+| .|+.+.+++.
T Consensus 63 lvVEaAS~~Av--~e~~~~~L~~g~d~iV~SVGALad~~l~erl~ 105 (255)
T COG1712 63 LVVEAASPEAV--REYVPKILKAGIDVIVMSVGALADEGLRERLR 105 (255)
T ss_pred eeeeeCCHHHH--HHHhHHHHhcCCCEEEEechhccChHHHHHHH
Confidence 99999997432 445556678999998876 3556666554
|
|
| >PRK08057 cobalt-precorrin-6x reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.033 Score=53.42 Aligned_cols=94 Identities=19% Similarity=0.258 Sum_probs=71.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--c
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--Q 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--~ 88 (420)
++|+|+|||+ =|+.+++.|.+.+ +++.+..-..... . ......+..+-+.|.+.+.++++ +
T Consensus 3 ~~IlvlgGT~-egr~la~~L~~~g-------~~v~~Svat~~g~---~------~~~~~~v~~G~l~~~~~l~~~l~~~~ 65 (248)
T PRK08057 3 PRILLLGGTS-EARALARALAAAG-------VDIVLSLAGRTGG---P------ADLPGPVRVGGFGGAEGLAAYLREEG 65 (248)
T ss_pred ceEEEEechH-HHHHHHHHHHhCC-------CeEEEEEccCCCC---c------ccCCceEEECCCCCHHHHHHHHHHCC
Confidence 4799999997 5999999998876 4554433322211 1 12345677777779999999997 6
Q ss_pred cCeeEeccCCCCC-CcHHHHHHHHHcCCcEEecC
Q 014694 89 TKLLLNCVGPYRL-HGDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 89 ~dvVIn~aGp~~~-~~~~vv~Ac~~~g~~yvdis 121 (420)
.++||...-||.. ...++.++|.+.++.|+-+-
T Consensus 66 i~~VIDATHPfA~~is~~a~~ac~~~~ipyiR~e 99 (248)
T PRK08057 66 IDLVIDATHPYAAQISANAAAACRALGIPYLRLE 99 (248)
T ss_pred CCEEEECCCccHHHHHHHHHHHHHHhCCcEEEEe
Confidence 8999999999864 36899999999999999883
|
|
| >cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.041 Score=52.33 Aligned_cols=101 Identities=9% Similarity=0.098 Sum_probs=64.0
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh-------------------hHHHHHHHHhCC-CCCCCccE
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-------------------TRVKQALQWASP-SHSLSIPI 71 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~-------------------~kl~~~~~~l~~-~~~~~~~~ 71 (420)
+|+|.|+ |.+|..+++.|+..|- -++.+++.+. .|.+.+.+.+.. ....++..
T Consensus 1 kVlvvG~-GGlG~eilk~La~~Gv------g~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~ 73 (234)
T cd01484 1 KVLLVGA-GGIGCELLKNLALMGF------GQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVP 73 (234)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCC------CeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEE
Confidence 4889986 7799999999999873 4677766531 233333333321 01123334
Q ss_pred EEEeCCCHHHH-HHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEec
Q 014694 72 LTADTTDPPSL-HRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDI 120 (420)
Q Consensus 72 i~~D~~d~~sl-~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdi 120 (420)
+..++.+.+.. ...+++.|+||++..-... ...+-+.|.+.++.+|+.
T Consensus 74 ~~~~i~~~~~~~~~f~~~~DvVi~a~Dn~~a-R~~ln~~c~~~~iplI~~ 122 (234)
T cd01484 74 YQNKVGPEQDFNDTFFEQFHIIVNALDNIIA-RRYVNGMLIFLIVPLIES 122 (234)
T ss_pred EeccCChhhhchHHHHhCCCEEEECCCCHHH-HHHHHHHHHHcCCCEEEE
Confidence 44555443332 4678999999999764332 245678899888888875
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou |
| >PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.035 Score=56.91 Aligned_cols=102 Identities=18% Similarity=0.128 Sum_probs=66.8
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC-------------------hhHHHHHHHHhCCCCCCCc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASPSHSLSI 69 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs-------------------~~kl~~~~~~l~~~~~~~~ 69 (420)
+..+|+|+|+ |.+|..++++|+..|- -++.+++.+ ..|.+.+.+.+.. ..+.+
T Consensus 41 ~~~~VlviG~-GGlGs~va~~La~~Gv------g~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~-~np~v 112 (392)
T PRK07878 41 KNARVLVIGA-GGLGSPTLLYLAAAGV------GTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVE-INPLV 112 (392)
T ss_pred hcCCEEEECC-CHHHHHHHHHHHHcCC------CeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHH-hCCCc
Confidence 3457999997 7799999999999883 356666533 1233333333321 12333
Q ss_pred cE--EEEeCCCHHHHHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEec
Q 014694 70 PI--LTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDI 120 (420)
Q Consensus 70 ~~--i~~D~~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdi 120 (420)
++ +...++ .+.+.++++++|+||.|..-+. ....+-++|.+.++.+|..
T Consensus 113 ~i~~~~~~i~-~~~~~~~~~~~D~Vvd~~d~~~-~r~~ln~~~~~~~~p~v~~ 163 (392)
T PRK07878 113 NVRLHEFRLD-PSNAVELFSQYDLILDGTDNFA-TRYLVNDAAVLAGKPYVWG 163 (392)
T ss_pred EEEEEeccCC-hhHHHHHHhcCCEEEECCCCHH-HHHHHHHHHHHcCCCEEEE
Confidence 33 334443 4567788999999999986542 1234668999999988764
|
|
| >PRK10669 putative cation:proton antiport protein; Provisional | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.033 Score=59.73 Aligned_cols=72 Identities=15% Similarity=0.182 Sum_probs=59.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-Hhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~-~~~~ 89 (420)
-+|+|.|. |-+|+.+++.|.+++ .++.+.++|+++.+++.+ .+...+.+|.+|++.++++ ++++
T Consensus 418 ~hiiI~G~-G~~G~~la~~L~~~g-------~~vvvId~d~~~~~~~~~-------~g~~~i~GD~~~~~~L~~a~i~~a 482 (558)
T PRK10669 418 NHALLVGY-GRVGSLLGEKLLAAG-------IPLVVIETSRTRVDELRE-------RGIRAVLGNAANEEIMQLAHLDCA 482 (558)
T ss_pred CCEEEECC-ChHHHHHHHHHHHCC-------CCEEEEECCHHHHHHHHH-------CCCeEEEcCCCCHHHHHhcCcccc
Confidence 46888886 889999999999987 789999999999877653 2578999999999998876 6789
Q ss_pred CeeEeccC
Q 014694 90 KLLLNCVG 97 (420)
Q Consensus 90 dvVIn~aG 97 (420)
|.||-+.+
T Consensus 483 ~~viv~~~ 490 (558)
T PRK10669 483 RWLLLTIP 490 (558)
T ss_pred CEEEEEcC
Confidence 98776654
|
|
| >PLN02602 lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.17 Score=51.04 Aligned_cols=82 Identities=18% Similarity=0.204 Sum_probs=56.0
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC--CCCCCccEEEEeCCCHHHHHHHH
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--SHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~--~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
++.+|.|+|| |.+|..++-.|+..+-. -++.+.+.++++++....++.. ...... .+..+ .|. +.+
T Consensus 36 ~~~KI~IIGa-G~VG~~~a~~l~~~~l~-----~el~LiDi~~~~~~g~a~DL~~~~~~~~~~-~i~~~-~dy----~~~ 103 (350)
T PLN02602 36 RHTKVSVVGV-GNVGMAIAQTILTQDLA-----DELALVDVNPDKLRGEMLDLQHAAAFLPRT-KILAS-TDY----AVT 103 (350)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCC-----CEEEEEeCCCchhhHHHHHHHhhhhcCCCC-EEEeC-CCH----HHh
Confidence 3379999996 99999999998876521 4799999999888776666642 011122 22221 232 238
Q ss_pred hccCeeEeccCCCCCC
Q 014694 87 SQTKLLLNCVGPYRLH 102 (420)
Q Consensus 87 ~~~dvVIn~aGp~~~~ 102 (420)
+++|+||-++|.-...
T Consensus 104 ~daDiVVitAG~~~k~ 119 (350)
T PLN02602 104 AGSDLCIVTAGARQIP 119 (350)
T ss_pred CCCCEEEECCCCCCCc
Confidence 8999999999975443
|
|
| >cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.054 Score=53.70 Aligned_cols=80 Identities=19% Similarity=0.157 Sum_probs=50.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh--hHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHh
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~--~kl~~~~~~l~~~-~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
|+|.|+||||++|..++..|+..+. ..++.+.+|+. ++++....++... ....... .....+ +. +.++
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~-----~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~-~i~~~~--d~-~~l~ 71 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDV-----VKEINLISRPKSLEKLKGLRLDIYDALAAAGIDA-EIKISS--DL-SDVA 71 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC-----CCEEEEEECcccccccccccchhhhchhccCCCc-EEEECC--CH-HHhC
Confidence 5899999999999999999998862 13688899955 5554443333210 0011111 122221 12 3489
Q ss_pred ccCeeEeccCCC
Q 014694 88 QTKLLLNCVGPY 99 (420)
Q Consensus 88 ~~dvVIn~aGp~ 99 (420)
++|+||-|+|..
T Consensus 72 ~aDiViitag~p 83 (309)
T cd05294 72 GSDIVIITAGVP 83 (309)
T ss_pred CCCEEEEecCCC
Confidence 999999999953
|
The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox |
| >PRK14852 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.037 Score=62.14 Aligned_cols=103 Identities=13% Similarity=0.103 Sum_probs=69.1
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC-------------------hhHHHHHHHHhCCCCCCCc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASPSHSLSI 69 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs-------------------~~kl~~~~~~l~~~~~~~~ 69 (420)
+..+|+|.|. |.+|..+++.|+..|- -++.+++-+ ..|.+.+.+.+.. -.+.+
T Consensus 331 ~~srVlVvGl-GGlGs~ia~~LAraGV------G~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~-INP~v 402 (989)
T PRK14852 331 LRSRVAIAGL-GGVGGIHLMTLARTGI------GNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALS-VNPFL 402 (989)
T ss_pred hcCcEEEECC-cHHHHHHHHHHHHcCC------CeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHH-HCCCC
Confidence 3457999996 6799999999999983 356665532 1344334333321 12344
Q ss_pred cE--EEEeCCCHHHHHHHHhccCeeEeccCCCCC-CcHHHHHHHHHcCCcEEec
Q 014694 70 PI--LTADTTDPPSLHRLCSQTKLLLNCVGPYRL-HGDPVAAACVHSGCDYLDI 120 (420)
Q Consensus 70 ~~--i~~D~~d~~sl~~~~~~~dvVIn~aGp~~~-~~~~vv~Ac~~~g~~yvdi 120 (420)
++ +...+ +++.++++++++|+||.|...+.. ....+.++|.+.++.+|..
T Consensus 403 ~I~~~~~~I-~~en~~~fl~~~DiVVDa~D~~~~~~rr~l~~~c~~~~IP~I~a 455 (989)
T PRK14852 403 DIRSFPEGV-AAETIDAFLKDVDLLVDGIDFFALDIRRRLFNRALELGIPVITA 455 (989)
T ss_pred eEEEEecCC-CHHHHHHHhhCCCEEEECCCCccHHHHHHHHHHHHHcCCCEEEe
Confidence 44 43344 567889999999999999875432 2257788999999987764
|
|
| >cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2 | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.038 Score=54.79 Aligned_cols=102 Identities=15% Similarity=0.213 Sum_probs=67.8
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC-------------------hhHHHHHHHHhCC-CCCCCccE
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASP-SHSLSIPI 71 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs-------------------~~kl~~~~~~l~~-~~~~~~~~ 71 (420)
+|+|.|+ |.+|..+++.|+..|- -++.+++.+ ..|.+.+.+.+.. ...-++..
T Consensus 1 kVlIVGa-GGlG~EiaKnLal~Gv------g~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~ 73 (312)
T cd01489 1 KVLVVGA-GGIGCELLKNLVLTGF------GEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVA 73 (312)
T ss_pred CEEEECC-CHHHHHHHHHHHHhcC------CeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEE
Confidence 4899997 7899999999999883 467776643 1233333333321 01223444
Q ss_pred EEEeCCCHHHHHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecC
Q 014694 72 LTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 72 i~~D~~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdis 121 (420)
+..++.+.....+.+++.|+||++...... ...+-+.|.++++.+|+..
T Consensus 74 ~~~~i~~~~~~~~f~~~~DvVv~a~Dn~~a-r~~in~~c~~~~ip~I~~g 122 (312)
T cd01489 74 YHANIKDPDFNVEFFKQFDLVFNALDNLAA-RRHVNKMCLAADVPLIESG 122 (312)
T ss_pred EeccCCCccchHHHHhcCCEEEECCCCHHH-HHHHHHHHHHCCCCEEEEe
Confidence 455666544455788999999999875432 3557789999999998853
|
UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2. |
| >COG2085 Predicted dinucleotide-binding enzymes [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.039 Score=51.23 Aligned_cols=89 Identities=16% Similarity=0.156 Sum_probs=57.8
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC-hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs-~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
.++.+|+||.+|..+++.|++.+ ++|.+..|+ +++++...+.+.. . + ...+...+++.+|
T Consensus 2 ~~~~i~GtGniG~alA~~~a~ag-------~eV~igs~r~~~~~~a~a~~l~~------~-i-----~~~~~~dA~~~aD 62 (211)
T COG2085 2 MIIAIIGTGNIGSALALRLAKAG-------HEVIIGSSRGPKALAAAAAALGP------L-I-----TGGSNEDAAALAD 62 (211)
T ss_pred cEEEEeccChHHHHHHHHHHhCC-------CeEEEecCCChhHHHHHHHhhcc------c-c-----ccCChHHHHhcCC
Confidence 45566778999999999999998 789998654 5566666666541 1 1 1234566778899
Q ss_pred eeEeccCCCCCCcHHHHHHHHH-c-CCcEEecC
Q 014694 91 LLLNCVGPYRLHGDPVAAACVH-S-GCDYLDIS 121 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~Ac~~-~-g~~yvdis 121 (420)
|||-++ ||... ..+++...+ . +.-.||.+
T Consensus 63 VVvLAV-P~~a~-~~v~~~l~~~~~~KIvID~t 93 (211)
T COG2085 63 VVVLAV-PFEAI-PDVLAELRDALGGKIVIDAT 93 (211)
T ss_pred EEEEec-cHHHH-HhHHHHHHHHhCCeEEEecC
Confidence 999877 55432 233333322 2 34566665
|
|
| >PLN00112 malate dehydrogenase (NADP); Provisional | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.055 Score=56.10 Aligned_cols=92 Identities=13% Similarity=0.013 Sum_probs=60.4
Q ss_pred CCCcceEEEEcCCcHHHHHHHHHHHHhCCCC--CCCcceEEEEecChhHHHHHHHHhCCCCCCC-ccEEEEeCCCHHHHH
Q 014694 7 IPELFDVIILGASGFTGKYVVREALKLFNFP--SSPIKSLALAGRNPTRVKQALQWASPSHSLS-IPILTADTTDPPSLH 83 (420)
Q Consensus 7 ~~~~~~IvV~GATG~~G~~va~~L~~~~~~~--~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~-~~~i~~D~~d~~sl~ 83 (420)
..++.+|.|+||+|.+|.+++-.|+...-.+ .....++.+.++++++++...-++......- ..+... ..| .
T Consensus 97 ~~~~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~-~~~----y 171 (444)
T PLN00112 97 WKKLINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIG-IDP----Y 171 (444)
T ss_pred CCCCeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEe-cCC----H
Confidence 4467899999999999999999998771100 0011478999999999887776664200000 122211 123 4
Q ss_pred HHHhccCeeEeccCCCCCCc
Q 014694 84 RLCSQTKLLLNCVGPYRLHG 103 (420)
Q Consensus 84 ~~~~~~dvVIn~aGp~~~~~ 103 (420)
+.++++|+||-++|.-...|
T Consensus 172 e~~kdaDiVVitAG~prkpG 191 (444)
T PLN00112 172 EVFQDAEWALLIGAKPRGPG 191 (444)
T ss_pred HHhCcCCEEEECCCCCCCCC
Confidence 56789999999999754433
|
|
| >PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.077 Score=52.20 Aligned_cols=102 Identities=13% Similarity=0.000 Sum_probs=61.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
|+|.|+| .|.+|..+++.|++.+ ++|.+.+|++++.+.+.+ .+ . .. ..+++++.+-+.++|
T Consensus 1 m~Ig~IG-lG~mG~~mA~~L~~~g-------~~v~v~dr~~~~~~~~~~-~g------~--~~--~~s~~~~~~~~~~ad 61 (299)
T PRK12490 1 MKLGLIG-LGKMGGNMAERLREDG-------HEVVGYDVNQEAVDVAGK-LG------I--TA--RHSLEELVSKLEAPR 61 (299)
T ss_pred CEEEEEc-ccHHHHHHHHHHHhCC-------CEEEEEECCHHHHHHHHH-CC------C--ee--cCCHHHHHHhCCCCC
Confidence 3688887 5999999999999987 788999999998876543 21 1 11 123332222222367
Q ss_pred eeEeccCCCCCCcHHHHHHHH---HcCCcEEecCC-cHHHHHHHHH
Q 014694 91 LLLNCVGPYRLHGDPVAAACV---HSGCDYLDISG-EPEFMERMEA 132 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~Ac~---~~g~~yvdisg-e~~~~~~~~~ 132 (420)
+||.|+.+... -+.+++... ..|.-+||.|. .+...+++.+
T Consensus 62 vVi~~vp~~~~-~~~v~~~i~~~l~~g~ivid~st~~~~~~~~~~~ 106 (299)
T PRK12490 62 TIWVMVPAGEV-TESVIKDLYPLLSPGDIVVDGGNSRYKDDLRRAE 106 (299)
T ss_pred EEEEEecCchH-HHHHHHHHhccCCCCCEEEECCCCCchhHHHHHH
Confidence 88777754311 133333322 23445788754 4555566554
|
|
| >PRK05442 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.034 Score=55.50 Aligned_cols=87 Identities=13% Similarity=0.006 Sum_probs=54.3
Q ss_pred CCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh--hHHHHHHHHhCC---CCCCCccEEEEeCCCHHHH
Q 014694 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASP---SHSLSIPILTADTTDPPSL 82 (420)
Q Consensus 8 ~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~--~kl~~~~~~l~~---~~~~~~~~i~~D~~d~~sl 82 (420)
.++.+|.|+||+|.+|..++-.|+..+-.+.....++.+.++++ ++++....++.. +...++. +. ...
T Consensus 2 ~~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~-i~------~~~ 74 (326)
T PRK05442 2 KAPVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVV-IT------DDP 74 (326)
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcE-Ee------cCh
Confidence 45679999999999999999988875421100113789999854 345444444431 0001221 11 123
Q ss_pred HHHHhccCeeEeccCCCCC
Q 014694 83 HRLCSQTKLLLNCVGPYRL 101 (420)
Q Consensus 83 ~~~~~~~dvVIn~aGp~~~ 101 (420)
.+.++++|+||-++|....
T Consensus 75 y~~~~daDiVVitaG~~~k 93 (326)
T PRK05442 75 NVAFKDADVALLVGARPRG 93 (326)
T ss_pred HHHhCCCCEEEEeCCCCCC
Confidence 5678899999999996543
|
|
| >PRK07411 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.038 Score=56.59 Aligned_cols=101 Identities=9% Similarity=0.074 Sum_probs=66.3
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC-------------------hhHHHHHHHHhCC-CCCCCc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASP-SHSLSI 69 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs-------------------~~kl~~~~~~l~~-~~~~~~ 69 (420)
..+|+|+|+ |.+|..++++|+..|- -++.+++.+ ..|.+.+.+.+.. ....++
T Consensus 38 ~~~VlivG~-GGlG~~va~~La~~Gv------g~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v 110 (390)
T PRK07411 38 AASVLCIGT-GGLGSPLLLYLAAAGI------GRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQV 110 (390)
T ss_pred cCcEEEECC-CHHHHHHHHHHHHcCC------CEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeE
Confidence 457999998 6699999999999983 356666543 1233344444421 011233
Q ss_pred cEEEEeCCCHHHHHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEe
Q 014694 70 PILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLD 119 (420)
Q Consensus 70 ~~i~~D~~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvd 119 (420)
..+...++ ++...++++++|+||.|...+.. -..+-++|.+.++.+|.
T Consensus 111 ~~~~~~~~-~~~~~~~~~~~D~Vvd~~d~~~~-r~~ln~~~~~~~~p~v~ 158 (390)
T PRK07411 111 DLYETRLS-SENALDILAPYDVVVDGTDNFPT-RYLVNDACVLLNKPNVY 158 (390)
T ss_pred EEEecccC-HHhHHHHHhCCCEEEECCCCHHH-HHHHHHHHHHcCCCEEE
Confidence 33444443 45677889999999999886532 24566899999988765
|
|
| >cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.03 Score=55.84 Aligned_cols=91 Identities=12% Similarity=-0.020 Sum_probs=55.2
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh--hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~--~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
++++|.|+||+|.+|..++..|+..+-.+.....++.+.++++ ++++....++......-..-+.... ...+.+
T Consensus 1 ~p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~----~~~~~~ 76 (322)
T cd01338 1 KPVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVITD----DPNVAF 76 (322)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEec----CcHHHh
Confidence 3679999999999999999998876521101113789999854 3355444444310000001011211 225678
Q ss_pred hccCeeEeccCCCCCCc
Q 014694 87 SQTKLLLNCVGPYRLHG 103 (420)
Q Consensus 87 ~~~dvVIn~aGp~~~~~ 103 (420)
+++|+||.++|.....+
T Consensus 77 ~daDivvitaG~~~k~g 93 (322)
T cd01338 77 KDADWALLVGAKPRGPG 93 (322)
T ss_pred CCCCEEEEeCCCCCCCC
Confidence 89999999999755433
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK12550 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.056 Score=52.57 Aligned_cols=44 Identities=18% Similarity=0.055 Sum_probs=37.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHh
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWA 61 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l 61 (420)
.+++|+|| |..++.++..|++.+. .++.++.|+.++.+++.+.+
T Consensus 123 ~~vlilGa-GGaarAi~~aL~~~g~------~~i~i~nR~~~~a~~la~~~ 166 (272)
T PRK12550 123 LVVALRGS-GGMAKAVAAALRDAGF------TDGTIVARNEKTGKALAELY 166 (272)
T ss_pred CeEEEECC-cHHHHHHHHHHHHCCC------CEEEEEeCCHHHHHHHHHHh
Confidence 37999997 8899999999998872 47999999999998887755
|
|
| >cd05293 LDH_1 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.12 Score=51.40 Aligned_cols=82 Identities=17% Similarity=0.143 Sum_probs=55.6
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCC-CCCccEEEEeCCCHHHHHHHHhc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSH-SLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~-~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
.++|.|+|| |.+|..++..|+..+- .-++.+.++++++++....++.... .....-+.+ ..|.+ .+++
T Consensus 3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~-----~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~-~~dy~----~~~~ 71 (312)
T cd05293 3 RNKVTVVGV-GQVGMACAISILAKGL-----ADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEA-DKDYS----VTAN 71 (312)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCC-----CCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEE-CCCHH----HhCC
Confidence 458999997 9999999998887752 1479999999888776666664200 011112222 12332 3789
Q ss_pred cCeeEeccCCCCCC
Q 014694 89 TKLLLNCVGPYRLH 102 (420)
Q Consensus 89 ~dvVIn~aGp~~~~ 102 (420)
+|+||.++|.....
T Consensus 72 adivvitaG~~~k~ 85 (312)
T cd05293 72 SKVVIVTAGARQNE 85 (312)
T ss_pred CCEEEECCCCCCCC
Confidence 99999999975543
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.067 Score=53.42 Aligned_cols=88 Identities=17% Similarity=0.190 Sum_probs=64.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
-.|+|+|+. .+|...+++....+ .+|++.+|+++|++ ++++++ .+.+ .|..|++.++++-+.+|
T Consensus 168 ~~V~I~G~G-GlGh~avQ~Aka~g-------a~Via~~~~~~K~e-~a~~lG------Ad~~-i~~~~~~~~~~~~~~~d 231 (339)
T COG1064 168 KWVAVVGAG-GLGHMAVQYAKAMG-------AEVIAITRSEEKLE-LAKKLG------ADHV-INSSDSDALEAVKEIAD 231 (339)
T ss_pred CEEEEECCc-HHHHHHHHHHHHcC-------CeEEEEeCChHHHH-HHHHhC------CcEE-EEcCCchhhHHhHhhCc
Confidence 469999985 89999999988887 79999999999984 555564 1222 33336666677666699
Q ss_pred eeEeccCCCCCCcHHHHHHHHHcCCc
Q 014694 91 LLLNCVGPYRLHGDPVAAACVHSGCD 116 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~Ac~~~g~~ 116 (420)
++|+++++ ..-.+.+++....|+.
T Consensus 232 ~ii~tv~~--~~~~~~l~~l~~~G~~ 255 (339)
T COG1064 232 AIIDTVGP--ATLEPSLKALRRGGTL 255 (339)
T ss_pred EEEECCCh--hhHHHHHHHHhcCCEE
Confidence 99999993 2336667777777763
|
|
| >PRK08291 ectoine utilization protein EutC; Validated | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.025 Score=56.59 Aligned_cols=102 Identities=15% Similarity=0.279 Sum_probs=68.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
.+++|+|+ |..|+..+..+....+ ..++.+.+|+.++.+++.+++.. ..++.+... +++++++.++|
T Consensus 133 ~~v~IiGa-G~~a~~~~~al~~~~~-----~~~V~v~~R~~~~a~~l~~~~~~--~~g~~v~~~-----~d~~~al~~aD 199 (330)
T PRK08291 133 SRAAVIGA-GEQARLQLEALTLVRP-----IREVRVWARDAAKAEAYAADLRA--ELGIPVTVA-----RDVHEAVAGAD 199 (330)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCC-----CCEEEEEcCCHHHHHHHHHHHhh--ccCceEEEe-----CCHHHHHccCC
Confidence 47999987 7789999998876431 15799999999999999887742 112332222 23677788999
Q ss_pred eeEeccCCCCCCcHHHHHH-HHHcCCcEEecCCcHHHHHH
Q 014694 91 LLLNCVGPYRLHGDPVAAA-CVHSGCDYLDISGEPEFMER 129 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~A-c~~~g~~yvdisge~~~~~~ 129 (420)
+||++.... ++++++ ..+.|+|...+....+..++
T Consensus 200 iVi~aT~s~----~p~i~~~~l~~g~~v~~vg~d~~~~rE 235 (330)
T PRK08291 200 IIVTTTPSE----EPILKAEWLHPGLHVTAMGSDAEHKNE 235 (330)
T ss_pred EEEEeeCCC----CcEecHHHcCCCceEEeeCCCCCCccc
Confidence 999987532 455654 35777876665444444433
|
|
| >TIGR02992 ectoine_eutC ectoine utilization protein EutC | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.009 Score=59.65 Aligned_cols=101 Identities=15% Similarity=0.218 Sum_probs=69.4
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
.+++|+|+ |..|+..++.|+...+ .-++.+.+|+.++.+++.+++.. ...+++.. . +++++.+.++|
T Consensus 130 ~~v~iiGa-G~qA~~~~~al~~~~~-----i~~v~V~~R~~~~a~~~a~~~~~--~~g~~v~~--~---~~~~~av~~aD 196 (326)
T TIGR02992 130 SVVAIFGA-GMQARLQLEALTLVRD-----IRSARIWARDSAKAEALALQLSS--LLGIDVTA--A---TDPRAAMSGAD 196 (326)
T ss_pred cEEEEECC-CHHHHHHHHHHHHhCC-----ccEEEEECCCHHHHHHHHHHHHh--hcCceEEE--e---CCHHHHhccCC
Confidence 46899986 8999999999975431 14799999999999998887741 11233222 2 34677788999
Q ss_pred eeEeccCCCCCCcHHHHH-HHHHcCCcEEecCCcHHHHH
Q 014694 91 LLLNCVGPYRLHGDPVAA-ACVHSGCDYLDISGEPEFME 128 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~-Ac~~~g~~yvdisge~~~~~ 128 (420)
+||+|.... ++++. ...+.|+|...+....+..+
T Consensus 197 iVvtaT~s~----~p~i~~~~l~~g~~i~~vg~~~p~~r 231 (326)
T TIGR02992 197 IIVTTTPSE----TPILHAEWLEPGQHVTAMGSDAEHKN 231 (326)
T ss_pred EEEEecCCC----CcEecHHHcCCCcEEEeeCCCCCCce
Confidence 999998542 35553 45678888776655444443
|
Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423). |
| >PRK04207 glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.052 Score=54.60 Aligned_cols=104 Identities=14% Similarity=0.093 Sum_probs=65.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceE-EEEecChhHHHHHHHHhCCCC----CCCcc-EEEEeCCCHHHHHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNPTRVKQALQWASPSH----SLSIP-ILTADTTDPPSLHR 84 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v-~iagRs~~kl~~~~~~l~~~~----~~~~~-~i~~D~~d~~sl~~ 84 (420)
++|.|.|+ |-+|+.+++.+.++.. +++ .+.+++.+....+++..+... ..... +-..++.-...++.
T Consensus 2 ikVaI~G~-GrIGr~va~al~~~~d------~eLvav~d~~~~~~~~la~~~G~~~~~~~~~~~~~~~~~~i~V~~~~~e 74 (341)
T PRK04207 2 IKVGVNGY-GTIGKRVADAVAAQPD------MELVGVAKTKPDYEARVAVEKGYPLYVADPEREKAFEEAGIPVAGTIED 74 (341)
T ss_pred eEEEEECC-CHHHHHHHHHHhcCCC------cEEEEEECCChHHHHHHHHhcCCCccccCccccccccCCceEEcCChhH
Confidence 58999999 9999999998877531 555 445556555555554332100 00000 00000000122455
Q ss_pred HHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCc
Q 014694 85 LCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGE 123 (420)
Q Consensus 85 ~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge 123 (420)
++.++|+||.|.+++. .....+.|.++|++.|+-+++
T Consensus 75 l~~~vDVVIdaT~~~~--~~e~a~~~~~aGk~VI~~~~~ 111 (341)
T PRK04207 75 LLEKADIVVDATPGGV--GAKNKELYEKAGVKAIFQGGE 111 (341)
T ss_pred hhccCCEEEECCCchh--hHHHHHHHHHCCCEEEEcCCC
Confidence 5678999999998864 467888999999999999886
|
|
| >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.015 Score=54.96 Aligned_cols=67 Identities=13% Similarity=0.165 Sum_probs=47.4
Q ss_pred EEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-----
Q 014694 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS----- 87 (420)
Q Consensus 13 IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~----- 87 (420)
.+=-.+||++|+.+|++|++.| ++|++.+|.. .+ . ......+|+.+.+++.++++
T Consensus 18 ~itN~SSGgIG~AIA~~la~~G-------a~Vvlv~~~~-~l-------~-----~~~~~~~Dv~d~~s~~~l~~~v~~~ 77 (227)
T TIGR02114 18 SITNHSTGHLGKIITETFLSAG-------HEVTLVTTKR-AL-------K-----PEPHPNLSIREIETTKDLLITLKEL 77 (227)
T ss_pred eecCCcccHHHHHHHHHHHHCC-------CEEEEEcChh-hc-------c-----cccCCcceeecHHHHHHHHHHHHHH
Confidence 3333468999999999999998 7898887631 11 1 00113478888887777653
Q ss_pred --ccCeeEeccCCC
Q 014694 88 --QTKLLLNCVGPY 99 (420)
Q Consensus 88 --~~dvVIn~aGp~ 99 (420)
..|++||+||..
T Consensus 78 ~g~iDiLVnnAgv~ 91 (227)
T TIGR02114 78 VQEHDILIHSMAVS 91 (227)
T ss_pred cCCCCEEEECCEec
Confidence 579999999964
|
In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity. |
| >TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.055 Score=52.89 Aligned_cols=97 Identities=18% Similarity=0.195 Sum_probs=61.9
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccCe
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKL 91 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~dv 91 (420)
+|.|+| .|.+|..+++.|++.+ ++|.+.+|++++.+.+.+ .+ .. ...+..++++++|+
T Consensus 1 ~IgvIG-~G~mG~~iA~~l~~~G-------~~V~~~dr~~~~~~~~~~-~g------~~-------~~~~~~~~~~~aDi 58 (291)
T TIGR01505 1 KVGFIG-LGIMGSPMSINLAKAG-------YQLHVTTIGPEVADELLA-AG------AV-------TAETARQVTEQADV 58 (291)
T ss_pred CEEEEE-ecHHHHHHHHHHHHCC-------CeEEEEcCCHHHHHHHHH-CC------Cc-------ccCCHHHHHhcCCE
Confidence 377887 5999999999999987 789999999988876543 11 11 11235677889999
Q ss_pred eEeccCCCCCCcHHHH---HHHH---HcCCcEEecCCcHH-HHHHHH
Q 014694 92 LLNCVGPYRLHGDPVA---AACV---HSGCDYLDISGEPE-FMERME 131 (420)
Q Consensus 92 VIn~aGp~~~~~~~vv---~Ac~---~~g~~yvdisge~~-~~~~~~ 131 (420)
||.|+..... -..++ +.+. ..++.+||.|.-.+ -.+++.
T Consensus 59 vi~~vp~~~~-~~~v~~~~~~~~~~~~~g~iivd~st~~~~~~~~l~ 104 (291)
T TIGR01505 59 IFTMVPDSPQ-VEEVAFGENGIIEGAKPGKTLVDMSSISPIESKRFA 104 (291)
T ss_pred EEEecCCHHH-HHHHHcCcchHhhcCCCCCEEEECCCCCHHHHHHHH
Confidence 9998853211 11222 1111 34556888765444 334443
|
This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism. |
| >PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.081 Score=57.29 Aligned_cols=106 Identities=13% Similarity=0.081 Sum_probs=76.5
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-Hhc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CSQ 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~-~~~ 88 (420)
+.+|+|.|. |-+|+.+++.|.+++ .++.+.++|+++.+.+.+ .+.+++.+|.+|++.++++ +++
T Consensus 400 ~~~vII~G~-Gr~G~~va~~L~~~g-------~~vvvID~d~~~v~~~~~-------~g~~v~~GDat~~~~L~~agi~~ 464 (601)
T PRK03659 400 KPQVIIVGF-GRFGQVIGRLLMANK-------MRITVLERDISAVNLMRK-------YGYKVYYGDATQLELLRAAGAEK 464 (601)
T ss_pred cCCEEEecC-chHHHHHHHHHHhCC-------CCEEEEECCHHHHHHHHh-------CCCeEEEeeCCCHHHHHhcCCcc
Confidence 357888885 889999999999887 789999999999876643 2467899999999999987 779
Q ss_pred cCeeEeccCCCCCCcHHHHHHHHHcCC--cEEecCCcHHHHHHHH
Q 014694 89 TKLLLNCVGPYRLHGDPVAAACVHSGC--DYLDISGEPEFMERME 131 (420)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~Ac~~~g~--~yvdisge~~~~~~~~ 131 (420)
+|.||-+.+-. .....++..+.+..- +.+--+.+..-.+.+.
T Consensus 465 A~~vv~~~~d~-~~n~~i~~~~r~~~p~~~IiaRa~~~~~~~~L~ 508 (601)
T PRK03659 465 AEAIVITCNEP-EDTMKIVELCQQHFPHLHILARARGRVEAHELL 508 (601)
T ss_pred CCEEEEEeCCH-HHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHH
Confidence 99998887532 222455566665543 3333444554444444
|
|
| >TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.036 Score=56.72 Aligned_cols=73 Identities=11% Similarity=0.088 Sum_probs=54.2
Q ss_pred cceEEEEcC----------------CcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEE
Q 014694 10 LFDVIILGA----------------SGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILT 73 (420)
Q Consensus 10 ~~~IvV~GA----------------TG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~ 73 (420)
..+|+|+|| ||.+|..+++++..+| .+|.+..++.+.. . .. .+..
T Consensus 185 ~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~G-------a~V~~~~g~~~~~------~----~~--~~~~ 245 (390)
T TIGR00521 185 GKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRG-------ADVTLITGPVSLL------T----PP--GVKS 245 (390)
T ss_pred CceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCC-------CEEEEeCCCCccC------C----CC--CcEE
Confidence 457999998 4679999999999998 7888877654321 1 11 3356
Q ss_pred EeCCCHHHH-HHHH----hccCeeEeccCCCCC
Q 014694 74 ADTTDPPSL-HRLC----SQTKLLLNCVGPYRL 101 (420)
Q Consensus 74 ~D~~d~~sl-~~~~----~~~dvVIn~aGp~~~ 101 (420)
+|+.+.+++ ++++ .+.|++||+||....
T Consensus 246 ~~v~~~~~~~~~~~~~~~~~~D~~i~~Aavsd~ 278 (390)
T TIGR00521 246 IKVSTAEEMLEAALNELAKDFDIFISAAAVADF 278 (390)
T ss_pred EEeccHHHHHHHHHHhhcccCCEEEEccccccc
Confidence 899988887 5444 368999999998654
|
This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity. |
| >PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.047 Score=48.42 Aligned_cols=96 Identities=14% Similarity=0.157 Sum_probs=59.4
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC-CCCCCccE---EEEeCCCHHHHHHHHh
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPI---LTADTTDPPSLHRLCS 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~-~~~~~~~~---i~~D~~d~~sl~~~~~ 87 (420)
+|.|+|| |-.|..++..|+.++ .+|.+.+|+++..+.+.+.-.. ....++.+ +.+ ..+++++++
T Consensus 1 KI~ViGa-G~~G~AlA~~la~~g-------~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~----t~dl~~a~~ 68 (157)
T PF01210_consen 1 KIAVIGA-GNWGTALAALLADNG-------HEVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKA----TTDLEEALE 68 (157)
T ss_dssp EEEEESS-SHHHHHHHHHHHHCT-------EEEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEE----ESSHHHHHT
T ss_pred CEEEECc-CHHHHHHHHHHHHcC-------CEEEEEeccHHHHHHHHHhCCCCCCCCCcccCccccc----ccCHHHHhC
Confidence 5899997 889999999999998 8999999999888777654321 00111111 222 134678889
Q ss_pred ccCeeEeccCCCCCCcHHHHHHHHH---cCCcEEecC
Q 014694 88 QTKLLLNCVGPYRLHGDPVAAACVH---SGCDYLDIS 121 (420)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~Ac~~---~g~~yvdis 121 (420)
++|+||-++-.+.. +.+++.... .+...|.++
T Consensus 69 ~ad~IiiavPs~~~--~~~~~~l~~~l~~~~~ii~~~ 103 (157)
T PF01210_consen 69 DADIIIIAVPSQAH--REVLEQLAPYLKKGQIIISAT 103 (157)
T ss_dssp T-SEEEE-S-GGGH--HHHHHHHTTTSHTT-EEEETS
T ss_pred cccEEEecccHHHH--HHHHHHHhhccCCCCEEEEec
Confidence 99999877743322 444444432 344455544
|
This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A .... |
| >PRK06153 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.059 Score=54.66 Aligned_cols=100 Identities=17% Similarity=0.171 Sum_probs=62.9
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC----------------------hhHHHHHHHHhCCCCCC
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN----------------------PTRVKQALQWASPSHSL 67 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs----------------------~~kl~~~~~~l~~~~~~ 67 (420)
..+|+|.|+ |.+|..+++.|++.+- -++.+++-+ ..|.+.+.+.+.. ...
T Consensus 176 ~~~VaIVG~-GG~GS~Va~~LAR~GV------geI~LVD~D~Ve~SNLnRQ~gaf~~~DvGk~~~KVevaa~rl~~-in~ 247 (393)
T PRK06153 176 GQRIAIIGL-GGTGSYILDLVAKTPV------REIHLFDGDDFLQHNAFRSPGAASIEELREAPKKVDYFKSRYSN-MRR 247 (393)
T ss_pred hCcEEEEcC-CccHHHHHHHHHHcCC------CEEEEECCCEecccccccccccCCHhHcCCcchHHHHHHHHHHH-hCC
Confidence 347999997 6799999999999883 456665532 1333333333321 112
Q ss_pred CccEEEEeCCCHHHHHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEec
Q 014694 68 SIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDI 120 (420)
Q Consensus 68 ~~~~i~~D~~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdi 120 (420)
++..+...+ +++.+. .+.++|+||-|+.-... -.-+.++|.+.++.+||+
T Consensus 248 ~I~~~~~~I-~~~n~~-~L~~~DiV~dcvDn~~a-R~~ln~~a~~~gIP~Id~ 297 (393)
T PRK06153 248 GIVPHPEYI-DEDNVD-ELDGFTFVFVCVDKGSS-RKLIVDYLEALGIPFIDV 297 (393)
T ss_pred eEEEEeecC-CHHHHH-HhcCCCEEEEcCCCHHH-HHHHHHHHHHcCCCEEEe
Confidence 343344444 555554 56889999998864321 244568888888888876
|
|
| >PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.12 Score=50.80 Aligned_cols=41 Identities=22% Similarity=0.282 Sum_probs=35.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQ 59 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~ 59 (420)
|+|.|+| .|-+|+.+++.|++.+ ++|.+.+|++++.+.+.+
T Consensus 1 m~Ig~IG-lG~MG~~mA~~L~~~g-------~~v~v~dr~~~~~~~~~~ 41 (301)
T PRK09599 1 MQLGMIG-LGRMGGNMARRLLRGG-------HEVVGYDRNPEAVEALAE 41 (301)
T ss_pred CEEEEEc-ccHHHHHHHHHHHHCC-------CeEEEEECCHHHHHHHHH
Confidence 4688887 5999999999999987 789999999998877643
|
|
| >PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.045 Score=54.04 Aligned_cols=79 Identities=16% Similarity=0.194 Sum_probs=52.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCC-CCCccEEEEeCCCHHHHHHHHhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSH-SLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~-~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
|+|.|+|+ |.+|..++..|++.+ ++|.+.+|++++++++.+...... ...... ...+.-..+.++.++++
T Consensus 2 mkI~iiG~-G~mG~~~a~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 72 (325)
T PRK00094 2 MKIAVLGA-GSWGTALAIVLARNG-------HDVTLWARDPEQAAEINADRENPRYLPGIKL-PDNLRATTDLAEALADA 72 (325)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCC-------CEEEEEECCHHHHHHHHHcCcccccCCCCcC-CCCeEEeCCHHHHHhCC
Confidence 47999986 999999999999987 789999999988877665321000 000000 00011112345567789
Q ss_pred CeeEeccCC
Q 014694 90 KLLLNCVGP 98 (420)
Q Consensus 90 dvVIn~aGp 98 (420)
|+||-|+.+
T Consensus 73 D~vi~~v~~ 81 (325)
T PRK00094 73 DLILVAVPS 81 (325)
T ss_pred CEEEEeCCH
Confidence 999999876
|
|
| >TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.11 Score=53.02 Aligned_cols=92 Identities=12% Similarity=-0.003 Sum_probs=57.6
Q ss_pred CCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEE--ecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHH
Q 014694 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA--GRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHR 84 (420)
Q Consensus 7 ~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~ia--gRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~ 84 (420)
..++.+|.|+||+|.+|..++-.|+..+-.+....+.+.+. ++++++++....++......-..-+..-..| .+
T Consensus 41 ~~~p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~~~----y~ 116 (387)
T TIGR01757 41 WKKTVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGIDP----YE 116 (387)
T ss_pred CCCCeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEecCC----HH
Confidence 44678999999999999999999987763110001233344 8899998877766642000001111111122 46
Q ss_pred HHhccCeeEeccCCCCCC
Q 014694 85 LCSQTKLLLNCVGPYRLH 102 (420)
Q Consensus 85 ~~~~~dvVIn~aGp~~~~ 102 (420)
.++++|+||.++|.....
T Consensus 117 ~~kdaDIVVitAG~prkp 134 (387)
T TIGR01757 117 VFEDADWALLIGAKPRGP 134 (387)
T ss_pred HhCCCCEEEECCCCCCCC
Confidence 688999999999975443
|
This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized. |
| >PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.085 Score=51.86 Aligned_cols=98 Identities=16% Similarity=0.174 Sum_probs=64.5
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccCe
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKL 91 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~dv 91 (420)
+|.|+| .|.+|..+++.|++.+ ++|.+.+|++++.+++.+. + .. ...+..++++++|+
T Consensus 3 ~Ig~IG-lG~mG~~mA~~l~~~G-------~~V~v~d~~~~~~~~~~~~-g------~~-------~~~s~~~~~~~aDv 60 (296)
T PRK15461 3 AIAFIG-LGQMGSPMASNLLKQG-------HQLQVFDVNPQAVDALVDK-G------AT-------PAASPAQAAAGAEF 60 (296)
T ss_pred eEEEEe-eCHHHHHHHHHHHHCC-------CeEEEEcCCHHHHHHHHHc-C------Cc-------ccCCHHHHHhcCCE
Confidence 688887 5999999999999987 7899999999998766542 1 11 11234567788999
Q ss_pred eEeccCCCCCCcHHHHH------HHHHcCCcEEecC-CcHHHHHHHHH
Q 014694 92 LLNCVGPYRLHGDPVAA------ACVHSGCDYLDIS-GEPEFMERMEA 132 (420)
Q Consensus 92 VIn~aGp~~~~~~~vv~------Ac~~~g~~yvdis-ge~~~~~~~~~ 132 (420)
||-|+.+.... ..++. .....+.-+||.| +.+...+++..
T Consensus 61 Vi~~vp~~~~~-~~vl~~~~~i~~~l~~g~lvid~sT~~p~~~~~l~~ 107 (296)
T PRK15461 61 VITMLPNGDLV-RSVLFGENGVCEGLSRDALVIDMSTIHPLQTDKLIA 107 (296)
T ss_pred EEEecCCHHHH-HHHHcCcccHhhcCCCCCEEEECCCCCHHHHHHHHH
Confidence 99888653211 12211 1123445578876 66666666655
|
|
| >cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2 | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.068 Score=50.54 Aligned_cols=94 Identities=12% Similarity=0.140 Sum_probs=60.1
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC----hhHH-------HHHHHHhCCCCCCCccEEEEeCC
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN----PTRV-------KQALQWASPSHSLSIPILTADTT 77 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs----~~kl-------~~~~~~l~~~~~~~~~~i~~D~~ 77 (420)
+..+|+|+|| |..|+.++..|.+.+-. ..++.+.+|+ .++. +.+.+... .. . .+
T Consensus 24 ~~~rvlvlGA-GgAg~aiA~~L~~~G~~----~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~----~~-~---~~-- 88 (226)
T cd05311 24 EEVKIVINGA-GAAGIAIARLLLAAGAK----PENIVVVDSKGVIYEGREDDLNPDKNEIAKETN----PE-K---TG-- 88 (226)
T ss_pred cCCEEEEECc-hHHHHHHHHHHHHcCcC----cceEEEEeCCCccccccchhhhHHHHHHHHHhc----cC-c---cc--
Confidence 3458999998 88999999999988720 0169999998 4432 22222221 00 0 11
Q ss_pred CHHHHHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecC
Q 014694 78 DPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 78 d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdis 121 (420)
.++.+.++++|+|||+.++... ...+++...+..+.| +++
T Consensus 89 --~~l~~~l~~~dvlIgaT~~G~~-~~~~l~~m~~~~ivf-~ls 128 (226)
T cd05311 89 --GTLKEALKGADVFIGVSRPGVV-KKEMIKKMAKDPIVF-ALA 128 (226)
T ss_pred --CCHHHHHhcCCEEEeCCCCCCC-CHHHHHhhCCCCEEE-EeC
Confidence 2355667789999999986543 356667665544455 666
|
Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph |
| >PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.12 Score=52.38 Aligned_cols=110 Identities=18% Similarity=0.223 Sum_probs=68.2
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEE--EecChhHHHHHHHHhCCCCCCCccEE-EEeC------------
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLAL--AGRNPTRVKQALQWASPSHSLSIPIL-TADT------------ 76 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~i--agRs~~kl~~~~~~l~~~~~~~~~~i-~~D~------------ 76 (420)
+|.|+|+||-||+..++-+.++.. . ++|.. +++|.+++.+..++++. +++ ..|-
T Consensus 3 ~VaILGsTGSIG~~tL~vi~~~p~-~----f~VvaLaa~~n~~~l~~q~~~f~p------~~v~i~~~~~~~~l~~~l~~ 71 (385)
T PRK05447 3 RITILGSTGSIGTQTLDVIRRNPD-R----FRVVALSAGKNVELLAEQAREFRP------KYVVVADEEAAKELKEALAA 71 (385)
T ss_pred eEEEEcCChHHHHHHHHHHHhCcc-c----cEEEEEEcCCCHHHHHHHHHHhCC------CEEEEcCHHHHHHHHHhhcc
Confidence 699999999999999888766531 2 55533 37889999888887752 111 1111
Q ss_pred ------CCHHHHHHHHh--ccCeeEeccCCCCCC------------------------cHHHHHHHHHcCCcEEecCCcH
Q 014694 77 ------TDPPSLHRLCS--QTKLLLNCVGPYRLH------------------------GDPVAAACVHSGCDYLDISGEP 124 (420)
Q Consensus 77 ------~d~~sl~~~~~--~~dvVIn~aGp~~~~------------------------~~~vv~Ac~~~g~~yvdisge~ 124 (420)
.-.+.+.+++. ++|+|+++..-+... |..+.+++.++|++.+-+-.|.
T Consensus 72 ~~~~v~~G~~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaLANKEslV~aG~~i~~~a~~~g~~i~PVDSEh 151 (385)
T PRK05447 72 AGIEVLAGEEGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIALANKESLVCAGELVMDAAKKSGAQILPVDSEH 151 (385)
T ss_pred CCceEEEChhHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEEEeCHHHHHhhHHHHHHHHHHcCCeEEEECHHH
Confidence 12455666665 468998877643211 2444555556666666665555
Q ss_pred HHHHHHHH
Q 014694 125 EFMERMEA 132 (420)
Q Consensus 125 ~~~~~~~~ 132 (420)
.-+.+.++
T Consensus 152 ~ai~q~l~ 159 (385)
T PRK05447 152 SAIFQCLP 159 (385)
T ss_pred HHHHHHhc
Confidence 55555554
|
|
| >PRK06223 malate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.032 Score=55.03 Aligned_cols=81 Identities=15% Similarity=0.048 Sum_probs=52.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCC-CCCCcc-EEEEeCCCHHHHHHHHhc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIP-ILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~-~~~~~~-~i~~D~~d~~sl~~~~~~ 88 (420)
++|.|+|| |.+|..++..++..+- .++.+.++++++++....++... ...... .+.. ..| . +.+++
T Consensus 3 ~KI~VIGa-G~vG~~ia~~la~~~~------~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~-~~d---~-~~~~~ 70 (307)
T PRK06223 3 KKISIIGA-GNVGATLAHLLALKEL------GDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITG-TND---Y-EDIAG 70 (307)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC------eEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEe-CCC---H-HHHCC
Confidence 58999999 9999999999988761 28999999988776544333210 001111 1221 123 2 34789
Q ss_pred cCeeEeccCCCCCCc
Q 014694 89 TKLLLNCVGPYRLHG 103 (420)
Q Consensus 89 ~dvVIn~aGp~~~~~ 103 (420)
+|+||.++|.....+
T Consensus 71 aDiVii~~~~p~~~~ 85 (307)
T PRK06223 71 SDVVVITAGVPRKPG 85 (307)
T ss_pred CCEEEECCCCCCCcC
Confidence 999999998654443
|
|
| >PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.052 Score=58.97 Aligned_cols=89 Identities=17% Similarity=0.188 Sum_probs=67.5
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-Hhc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CSQ 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~-~~~ 88 (420)
+.+|+|.|. |-+|+.+++.|.+++ .++.+.++|+++.+.+.+ .+.+++.+|.+|++.++++ +++
T Consensus 400 ~~~vII~G~-Gr~G~~va~~L~~~g-------~~vvvID~d~~~v~~~~~-------~g~~v~~GDat~~~~L~~agi~~ 464 (621)
T PRK03562 400 QPRVIIAGF-GRFGQIVGRLLLSSG-------VKMTVLDHDPDHIETLRK-------FGMKVFYGDATRMDLLESAGAAK 464 (621)
T ss_pred cCcEEEEec-ChHHHHHHHHHHhCC-------CCEEEEECCHHHHHHHHh-------cCCeEEEEeCCCHHHHHhcCCCc
Confidence 357888886 889999999999887 789999999999877644 2468899999999988875 678
Q ss_pred cCeeEeccCCCCCCcHHHHHHHHHcC
Q 014694 89 TKLLLNCVGPYRLHGDPVAAACVHSG 114 (420)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~Ac~~~g 114 (420)
+|.||-+..-. .....++..+++..
T Consensus 465 A~~vvv~~~d~-~~n~~i~~~ar~~~ 489 (621)
T PRK03562 465 AEVLINAIDDP-QTSLQLVELVKEHF 489 (621)
T ss_pred CCEEEEEeCCH-HHHHHHHHHHHHhC
Confidence 99998887421 12244455555543
|
|
| >PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.093 Score=43.69 Aligned_cols=101 Identities=22% Similarity=0.289 Sum_probs=71.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceE-EEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v-~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
++|.|+|+ |.+|+...+.+.+..+ ..++ .+.++++++.++..+..+ +. . .+| ++++++
T Consensus 1 i~v~iiG~-G~~g~~~~~~~~~~~~-----~~~v~~v~d~~~~~~~~~~~~~~------~~-~---~~~---~~~ll~~~ 61 (120)
T PF01408_consen 1 IRVGIIGA-GSIGRRHLRALLRSSP-----DFEVVAVCDPDPERAEAFAEKYG------IP-V---YTD---LEELLADE 61 (120)
T ss_dssp EEEEEEST-SHHHHHHHHHHHHTTT-----TEEEEEEECSSHHHHHHHHHHTT------SE-E---ESS---HHHHHHHT
T ss_pred CEEEEECC-cHHHHHHHHHHHhcCC-----CcEEEEEEeCCHHHHHHHHHHhc------cc-c---hhH---HHHHHHhh
Confidence 47899998 8889999999888753 1454 688999999888877664 23 1 223 666666
Q ss_pred ccCeeEeccCCCCCCcHHHHHHHHHcCCc-EEe--cCCcHHHHHHHHH
Q 014694 88 QTKLLLNCVGPYRLHGDPVAAACVHSGCD-YLD--ISGEPEFMERMEA 132 (420)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~-yvd--isge~~~~~~~~~ 132 (420)
+.|+|+-+..+.. ...++..|.+.|.| +++ ++-...=.+++++
T Consensus 62 ~~D~V~I~tp~~~--h~~~~~~~l~~g~~v~~EKP~~~~~~~~~~l~~ 107 (120)
T PF01408_consen 62 DVDAVIIATPPSS--HAEIAKKALEAGKHVLVEKPLALTLEEAEELVE 107 (120)
T ss_dssp TESEEEEESSGGG--HHHHHHHHHHTTSEEEEESSSSSSHHHHHHHHH
T ss_pred cCCEEEEecCCcc--hHHHHHHHHHcCCEEEEEcCCcCCHHHHHHHHH
Confidence 6899988776533 36888999999997 555 4445555555554
|
GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A .... |
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=95.53 E-value=0.045 Score=49.36 Aligned_cols=74 Identities=19% Similarity=0.263 Sum_probs=51.5
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
...+|+|+|+++.+|..++++|.+++ .++.++.|+. +++.+.+++
T Consensus 43 ~gk~vlViG~G~~~G~~~a~~L~~~g-------~~V~v~~r~~----------------------------~~l~~~l~~ 87 (168)
T cd01080 43 AGKKVVVVGRSNIVGKPLAALLLNRN-------ATVTVCHSKT----------------------------KNLKEHTKQ 87 (168)
T ss_pred CCCEEEEECCcHHHHHHHHHHHhhCC-------CEEEEEECCc----------------------------hhHHHHHhh
Confidence 44689999997778999999999987 6788888863 234567778
Q ss_pred cCeeEeccCCCCCCcHHHHHHHHHcCCcEEecC
Q 014694 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdis 121 (420)
+|+||++++--+..... -.+.+.-.||++
T Consensus 88 aDiVIsat~~~~ii~~~----~~~~~~viIDla 116 (168)
T cd01080 88 ADIVIVAVGKPGLVKGD----MVKPGAVVIDVG 116 (168)
T ss_pred CCEEEEcCCCCceecHH----HccCCeEEEEcc
Confidence 99999998853322222 123345567763
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >PRK06141 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.035 Score=55.14 Aligned_cols=101 Identities=12% Similarity=0.160 Sum_probs=67.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
.+|.|+| +|..|+..++.++...+ ..+|.+.+|++++.+++.+++.. ....+..+ +++++.++++|
T Consensus 126 ~~v~iiG-~G~~a~~~~~al~~~~~-----~~~V~V~~Rs~~~a~~~a~~~~~---~g~~~~~~-----~~~~~av~~aD 191 (314)
T PRK06141 126 SRLLVVG-TGRLASLLALAHASVRP-----IKQVRVWGRDPAKAEALAAELRA---QGFDAEVV-----TDLEAAVRQAD 191 (314)
T ss_pred ceEEEEC-CcHHHHHHHHHHHhcCC-----CCEEEEEcCCHHHHHHHHHHHHh---cCCceEEe-----CCHHHHHhcCC
Confidence 4799998 49999999997776331 16899999999999999887741 12223322 34566778999
Q ss_pred eeEeccCCCCCCcHHHHH-HHHHcCCcEEecCCcHHHHHH
Q 014694 91 LLLNCVGPYRLHGDPVAA-ACVHSGCDYLDISGEPEFMER 129 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~-Ac~~~g~~yvdisge~~~~~~ 129 (420)
+||+|.... ++++. ...+.|+|..-++...++.++
T Consensus 192 IVi~aT~s~----~pvl~~~~l~~g~~i~~ig~~~~~~~E 227 (314)
T PRK06141 192 IISCATLST----EPLVRGEWLKPGTHLDLVGNFTPDMRE 227 (314)
T ss_pred EEEEeeCCC----CCEecHHHcCCCCEEEeeCCCCccccc
Confidence 998877632 35443 345677754445444555544
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.43 E-value=0.016 Score=54.79 Aligned_cols=55 Identities=20% Similarity=0.154 Sum_probs=44.4
Q ss_pred HHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh----ccCeeEeccCCC
Q 014694 26 VVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS----QTKLLLNCVGPY 99 (420)
Q Consensus 26 va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~----~~dvVIn~aGp~ 99 (420)
+++.|++++ .+|++++|+.++++. ..++.+|++|.+++.++++ +.|+|||+||..
T Consensus 1 ~a~~l~~~G-------~~Vv~~~r~~~~~~~------------~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~ 59 (241)
T PRK12428 1 TARLLRFLG-------ARVIGVDRREPGMTL------------DGFIQADLGDPASIDAAVAALPGRIDALFNIAGVP 59 (241)
T ss_pred ChHHHHhCC-------CEEEEEeCCcchhhh------------hHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCC
Confidence 467888887 799999999876521 2357899999999999987 479999999964
|
|
| >PRK11559 garR tartronate semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.41 E-value=0.12 Score=50.66 Aligned_cols=98 Identities=21% Similarity=0.281 Sum_probs=64.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
++|.|+| .|.+|..+++.|++.+ ++|.+.+|++++.+.+.+ .+ +. . . +++.++++++|
T Consensus 3 ~~IgviG-~G~mG~~~a~~l~~~g-------~~v~~~d~~~~~~~~~~~-~g------~~--~--~---~~~~e~~~~~d 60 (296)
T PRK11559 3 MKVGFIG-LGIMGKPMSKNLLKAG-------YSLVVYDRNPEAVAEVIA-AG------AE--T--A---STAKAVAEQCD 60 (296)
T ss_pred ceEEEEc-cCHHHHHHHHHHHHCC-------CeEEEEcCCHHHHHHHHH-CC------Ce--e--c---CCHHHHHhcCC
Confidence 4799998 5999999999999987 788999999988766543 11 11 1 1 23456678999
Q ss_pred eeEeccCCCCCCcHHHH------HHHHHcCCcEEecCCcHHH-HHHHH
Q 014694 91 LLLNCVGPYRLHGDPVA------AACVHSGCDYLDISGEPEF-MERME 131 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv------~Ac~~~g~~yvdisge~~~-~~~~~ 131 (420)
+||-|+-.... -..++ ..+...+..++|.|.-.+- .+++.
T Consensus 61 ~vi~~vp~~~~-~~~v~~~~~~~~~~~~~g~iiid~st~~~~~~~~l~ 107 (296)
T PRK11559 61 VIITMLPNSPH-VKEVALGENGIIEGAKPGTVVIDMSSIAPLASREIA 107 (296)
T ss_pred EEEEeCCCHHH-HHHHHcCcchHhhcCCCCcEEEECCCCCHHHHHHHH
Confidence 99988853221 12222 1122456679998766553 34443
|
|
| >KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=95.40 E-value=0.089 Score=51.78 Aligned_cols=93 Identities=17% Similarity=0.187 Sum_probs=71.8
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
....|.|.|+.| +|..-+++...-+ ++|.+++++..|.++..+.|+ .+.+..-..|++.+.++.+-
T Consensus 181 pG~~vgI~GlGG-LGh~aVq~AKAMG-------~rV~vis~~~~kkeea~~~LG------Ad~fv~~~~d~d~~~~~~~~ 246 (360)
T KOG0023|consen 181 PGKWVGIVGLGG-LGHMAVQYAKAMG-------MRVTVISTSSKKKEEAIKSLG------ADVFVDSTEDPDIMKAIMKT 246 (360)
T ss_pred CCcEEEEecCcc-cchHHHHHHHHhC-------cEEEEEeCCchhHHHHHHhcC------cceeEEecCCHHHHHHHHHh
Confidence 345799999988 9999999988888 899999999988888888886 34454444589999999998
Q ss_pred cCeeEeccCCCCCC-cHHHHHHHHHcCC
Q 014694 89 TKLLLNCVGPYRLH-GDPVAAACVHSGC 115 (420)
Q Consensus 89 ~dvVIn~aGp~~~~-~~~vv~Ac~~~g~ 115 (420)
.|.++|++--+... -++.++.++.+|+
T Consensus 247 ~dg~~~~v~~~a~~~~~~~~~~lk~~Gt 274 (360)
T KOG0023|consen 247 TDGGIDTVSNLAEHALEPLLGLLKVNGT 274 (360)
T ss_pred hcCcceeeeeccccchHHHHHHhhcCCE
Confidence 89888888643222 2666777766665
|
|
| >COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.074 Score=53.11 Aligned_cols=74 Identities=16% Similarity=0.195 Sum_probs=50.7
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHH---HHHHHH
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPP---SLHRLC 86 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~---sl~~~~ 86 (420)
.-.|+|+||+|.+|...++-+...+ ..++++..+.+|.+ .+.+++. . ...|..+++ .+.++.
T Consensus 143 g~~VLV~gaaGgVG~~aiQlAk~~G-------~~~v~~~~s~~k~~-~~~~lGA------d-~vi~y~~~~~~~~v~~~t 207 (326)
T COG0604 143 GETVLVHGAAGGVGSAAIQLAKALG-------ATVVAVVSSSEKLE-LLKELGA------D-HVINYREEDFVEQVRELT 207 (326)
T ss_pred CCEEEEecCCchHHHHHHHHHHHcC-------CcEEEEecCHHHHH-HHHhcCC------C-EEEcCCcccHHHHHHHHc
Confidence 3479999999999999998877776 45666666677776 6666651 1 223344432 333344
Q ss_pred h--ccCeeEeccCC
Q 014694 87 S--QTKLLLNCVGP 98 (420)
Q Consensus 87 ~--~~dvVIn~aGp 98 (420)
. +.|+|+.++|.
T Consensus 208 ~g~gvDvv~D~vG~ 221 (326)
T COG0604 208 GGKGVDVVLDTVGG 221 (326)
T ss_pred CCCCceEEEECCCH
Confidence 3 58999999985
|
|
| >PLN02350 phosphogluconate dehydrogenase (decarboxylating) | Back alignment and domain information |
|---|
Probab=95.31 E-value=0.17 Score=53.43 Aligned_cols=101 Identities=8% Similarity=0.074 Sum_probs=65.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHh---CC------C-------CCCCccEEEE
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWA---SP------S-------HSLSIPILTA 74 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l---~~------~-------~~~~~~~i~~ 74 (420)
.+|-++| .|-.|+.+++.|++++ ++|.+.+|+.++.+.+.+.. +. . ...+.++|..
T Consensus 7 ~~IG~IG-LG~MG~~mA~nL~~~G-------~~V~V~NRt~~k~~~l~~~~~~~Ga~~~~~a~s~~e~v~~l~~~dvIi~ 78 (493)
T PLN02350 7 SRIGLAG-LAVMGQNLALNIAEKG-------FPISVYNRTTSKVDETVERAKKEGNLPLYGFKDPEDFVLSIQKPRSVII 78 (493)
T ss_pred CCEEEEe-eHHHHHHHHHHHHhCC-------CeEEEECCCHHHHHHHHHhhhhcCCcccccCCCHHHHHhcCCCCCEEEE
Confidence 3688886 6999999999999998 89999999999988776531 10 0 0011344444
Q ss_pred eCCCHHHHHHHHh-------ccCeeEeccCCCCCCcHHHHHHHHHcCCcEEe
Q 014694 75 DTTDPPSLHRLCS-------QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLD 119 (420)
Q Consensus 75 D~~d~~sl~~~~~-------~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvd 119 (420)
=+.|.+.+++++. .-|+||.+.-........+.+.+.+.|++|+|
T Consensus 79 ~v~~~~aV~~Vi~gl~~~l~~G~iiID~sT~~~~~t~~~~~~l~~~Gi~fld 130 (493)
T PLN02350 79 LVKAGAPVDQTIKALSEYMEPGDCIIDGGNEWYENTERRIKEAAEKGLLYLG 130 (493)
T ss_pred ECCCcHHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEe
Confidence 4555554444432 23566666543333446666777777777777
|
|
| >PTZ00142 6-phosphogluconate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.28 E-value=0.14 Score=53.77 Aligned_cols=100 Identities=10% Similarity=0.135 Sum_probs=63.5
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC--------CC----C---CCccEEEEeC
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--------SH----S---LSIPILTADT 76 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~--------~~----~---~~~~~i~~D~ 76 (420)
+|-|+|. |-.|..+++.|++++ ++|.+.+|++++.+.+.+.... .. . .+..++..=+
T Consensus 3 ~IgvIGL-G~MG~~lA~nL~~~G-------~~V~v~dr~~~~~~~l~~~~~~~g~~i~~~~s~~e~v~~l~~~d~Iil~v 74 (470)
T PTZ00142 3 DIGLIGL-AVMGQNLALNIASRG-------FKISVYNRTYEKTEEFVKKAKEGNTRVKGYHTLEELVNSLKKPRKVILLI 74 (470)
T ss_pred EEEEEeE-hHHHHHHHHHHHHCC-------CeEEEEeCCHHHHHHHHHhhhhcCCcceecCCHHHHHhcCCCCCEEEEEe
Confidence 6888885 999999999999998 7999999999998877653110 00 0 0123233223
Q ss_pred CCHHHHHHHHh-------ccCeeEeccCCCCCCcHHHHHHHHHcCCcEEe
Q 014694 77 TDPPSLHRLCS-------QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLD 119 (420)
Q Consensus 77 ~d~~sl~~~~~-------~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvd 119 (420)
.+.+.++.++. .-++||.+.--.........+.+.+.|+||+|
T Consensus 75 ~~~~~v~~vi~~l~~~L~~g~iIID~gn~~~~dt~~r~~~l~~~Gi~fld 124 (470)
T PTZ00142 75 KAGEAVDETIDNLLPLLEKGDIIIDGGNEWYLNTERRIKRCEEKGILYLG 124 (470)
T ss_pred CChHHHHHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEc
Confidence 34333333322 23566666544333346666777788888887
|
|
| >TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 | Back alignment and domain information |
|---|
Probab=95.27 E-value=0.14 Score=47.52 Aligned_cols=80 Identities=15% Similarity=0.148 Sum_probs=50.6
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC---hhHH---------------HHHHHHhCC-CCCCCc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN---PTRV---------------KQALQWASP-SHSLSI 69 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs---~~kl---------------~~~~~~l~~-~~~~~~ 69 (420)
+..+|+|.|+ |.+|..++++|++.|- -+|.+.+++ .+.+ +.+.+.+.. ....++
T Consensus 20 ~~~~V~IvG~-GglGs~ia~~La~~Gv------g~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i 92 (200)
T TIGR02354 20 EQATVAICGL-GGLGSNVAINLARAGI------GKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEI 92 (200)
T ss_pred hCCcEEEECc-CHHHHHHHHHHHHcCC------CEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEE
Confidence 3457999998 7799999999999982 368888876 2222 112222211 011223
Q ss_pred cEEEEeCCCHHHHHHHHhccCeeEecc
Q 014694 70 PILTADTTDPPSLHRLCSQTKLLLNCV 96 (420)
Q Consensus 70 ~~i~~D~~d~~sl~~~~~~~dvVIn~a 96 (420)
..+..++ +.+.+.++++++|+||.|.
T Consensus 93 ~~~~~~i-~~~~~~~~~~~~DlVi~a~ 118 (200)
T TIGR02354 93 EAYDEKI-TEENIDKFFKDADIVCEAF 118 (200)
T ss_pred EEeeeeC-CHhHHHHHhcCCCEEEECC
Confidence 3344455 3467788888999999884
|
Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter. |
| >cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=95.25 E-value=0.17 Score=49.45 Aligned_cols=92 Identities=17% Similarity=0.211 Sum_probs=58.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCC-HHHHHHHHhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTD-PPSLHRLCSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d-~~sl~~~~~~~ 89 (420)
-.++|+||+|.+|+.+++.+...+ .++.++.|+.++.+.+ .+++ ... ..|..+ .+.+.+. .+.
T Consensus 164 ~~vlI~ga~g~vG~~~~~~a~~~g-------~~v~~~~~~~~~~~~~-~~~~------~~~-~~~~~~~~~~~~~~-~~~ 227 (332)
T cd08259 164 DTVLVTGAGGGVGIHAIQLAKALG-------ARVIAVTRSPEKLKIL-KELG------ADY-VIDGSKFSEDVKKL-GGA 227 (332)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcC-------CeEEEEeCCHHHHHHH-HHcC------CcE-EEecHHHHHHHHhc-cCC
Confidence 479999999999999999998887 7888888988877554 4332 111 123222 1222222 268
Q ss_pred CeeEeccCCCCCCcHHHHHHHHHcCCcEEecC
Q 014694 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdis 121 (420)
|+||+++|... ....-.|...+-+++.++
T Consensus 228 d~v~~~~g~~~---~~~~~~~~~~~g~~v~~g 256 (332)
T cd08259 228 DVVIELVGSPT---IEESLRSLNKGGRLVLIG 256 (332)
T ss_pred CEEEECCChHH---HHHHHHHhhcCCEEEEEc
Confidence 99999998532 222223334445677664
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. |
| >PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms [] | Back alignment and domain information |
|---|
Probab=95.21 E-value=0.25 Score=42.47 Aligned_cols=45 Identities=20% Similarity=0.210 Sum_probs=35.3
Q ss_pred EEEEcCCcHHHHHHHHHHHHhCCCCCCCcceE--EEEecChhHHHHHHHHhC
Q 014694 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSL--ALAGRNPTRVKQALQWAS 62 (420)
Q Consensus 13 IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v--~iagRs~~kl~~~~~~l~ 62 (420)
|+|+|+||-||+...+-+.++.+ . ++| ..+++|.+++.+...++.
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d-~----f~v~~Lsa~~n~~~L~~q~~~f~ 47 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPD-K----FEVVALSAGSNIEKLAEQAREFK 47 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTT-T----EEEEEEEESSTHHHHHHHHHHHT
T ss_pred CEEEcCCcHHHHHHHHHHHhCCC-c----eEEEEEEcCCCHHHHHHHHHHhC
Confidence 68999999999999988877642 2 565 345688889988888774
|
In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A .... |
| >cd05292 LDH_2 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=95.20 E-value=0.12 Score=51.18 Aligned_cols=79 Identities=18% Similarity=0.194 Sum_probs=53.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC--CCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--SHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~--~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
|+|.|+|+ |.+|..++..|+..+. ..++.+.++++++++....++.. ....... +.. .|. +.+++
T Consensus 1 mkI~IIGa-G~VG~~~a~~l~~~g~-----~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~-i~~--~d~----~~l~~ 67 (308)
T cd05292 1 MKVAIVGA-GFVGSTTAYALLLRGL-----ASEIVLVDINKAKAEGEAMDLAHGTPFVKPVR-IYA--GDY----ADCKG 67 (308)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCC-----CCEEEEEECCchhhhhHHHHHHccccccCCeE-Eee--CCH----HHhCC
Confidence 57999998 9999999999998762 14799999999887644444431 0011111 111 232 34789
Q ss_pred cCeeEeccCCCCCC
Q 014694 89 TKLLLNCVGPYRLH 102 (420)
Q Consensus 89 ~dvVIn~aGp~~~~ 102 (420)
+|+||.++|.....
T Consensus 68 aDiViita~~~~~~ 81 (308)
T cd05292 68 ADVVVITAGANQKP 81 (308)
T ss_pred CCEEEEccCCCCCC
Confidence 99999999965443
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK07634 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=95.20 E-value=0.13 Score=48.83 Aligned_cols=74 Identities=16% Similarity=0.231 Sum_probs=49.8
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcce-EEEEec-ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKS-LALAGR-NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~-v~iagR-s~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
..++|.|+|+ |.+|..++..|++++... .+ +.+..| +.++++.+.++.+ +. .. .| .++++
T Consensus 3 ~~~kI~iIG~-G~mg~ala~~l~~~~~~~----~~~i~~~~~~~~~~~~~~~~~~~------~~--~~--~~---~~~~~ 64 (245)
T PRK07634 3 KKHRILFIGA-GRMAEAIFSGLLKTSKEY----IEEIIVSNRSNVEKLDQLQARYN------VS--TT--TD---WKQHV 64 (245)
T ss_pred CCCeEEEECc-CHHHHHHHHHHHhCCCCC----cCeEEEECCCCHHHHHHHHHHcC------cE--Ee--CC---hHHHH
Confidence 3578999985 999999999998875211 33 667777 4677766665432 21 11 22 34566
Q ss_pred hccCeeEeccCCCC
Q 014694 87 SQTKLLLNCVGPYR 100 (420)
Q Consensus 87 ~~~dvVIn~aGp~~ 100 (420)
+++|+||.|+-|..
T Consensus 65 ~~~DiViiavp~~~ 78 (245)
T PRK07634 65 TSVDTIVLAMPPSA 78 (245)
T ss_pred hcCCEEEEecCHHH
Confidence 78999999987643
|
|
| >TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=95.19 E-value=0.079 Score=52.58 Aligned_cols=81 Identities=15% Similarity=0.036 Sum_probs=51.4
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccCe
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKL 91 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~dv 91 (420)
+|.|+||+|.+|..++-.|+..+- ..++++.++++ .+....++.. ......+.... +.+++.+.++++|+
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~-----~~elvL~Di~~--a~g~a~DL~~-~~~~~~i~~~~--~~~~~~~~~~daDi 70 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPY-----VSELSLYDIAG--AAGVAADLSH-IPTAASVKGFS--GEEGLENALKGADV 70 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCC-----CcEEEEecCCC--CcEEEchhhc-CCcCceEEEec--CCCchHHHcCCCCE
Confidence 589999999999999998887752 14789999876 2222222321 01111222111 12335678999999
Q ss_pred eEeccCCCCCC
Q 014694 92 LLNCVGPYRLH 102 (420)
Q Consensus 92 VIn~aGp~~~~ 102 (420)
||.++|.-...
T Consensus 71 vvitaG~~~~~ 81 (312)
T TIGR01772 71 VVIPAGVPRKP 81 (312)
T ss_pred EEEeCCCCCCC
Confidence 99999975443
|
Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases. |
| >cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=95.18 E-value=0.088 Score=48.79 Aligned_cols=93 Identities=14% Similarity=0.108 Sum_probs=60.0
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
+.++|+|.|. |.+|+.++++|.+.+ .+|.+.+++.++++++.+.++ .. .+|. +++.. .+
T Consensus 27 ~gk~v~I~G~-G~vG~~~A~~L~~~G-------~~Vvv~D~~~~~~~~~~~~~g------~~--~v~~---~~l~~--~~ 85 (200)
T cd01075 27 EGKTVAVQGL-GKVGYKLAEHLLEEG-------AKLIVADINEEAVARAAELFG------AT--VVAP---EEIYS--VD 85 (200)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCC-------CEEEEEcCCHHHHHHHHHHcC------CE--EEcc---hhhcc--cc
Confidence 3467999997 789999999999988 789999999998877766542 11 2222 21211 27
Q ss_pred cCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHH
Q 014694 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEF 126 (420)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~ 126 (420)
+|+++.|+.-.... .. .+.+-++++|--.+..++
T Consensus 86 ~Dv~vp~A~~~~I~-~~---~~~~l~~~~v~~~AN~~~ 119 (200)
T cd01075 86 ADVFAPCALGGVIN-DD---TIPQLKAKAIAGAANNQL 119 (200)
T ss_pred CCEEEecccccccC-HH---HHHHcCCCEEEECCcCcc
Confidence 99999887543222 22 223445665554444433
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc |
| >PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=95.17 E-value=0.11 Score=53.85 Aligned_cols=98 Identities=17% Similarity=0.212 Sum_probs=62.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-cc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-QT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-~~ 89 (420)
.+|+|+|+++ +|..+++.|++.| .+|.+.+++........+++. ...+.+...+ ++..+ .. .+
T Consensus 6 k~v~v~G~g~-~G~s~a~~l~~~G-------~~V~~~d~~~~~~~~~~~~l~---~~g~~~~~~~--~~~~~---~~~~~ 69 (447)
T PRK02472 6 KKVLVLGLAK-SGYAAAKLLHKLG-------ANVTVNDGKPFSENPEAQELL---EEGIKVICGS--HPLEL---LDEDF 69 (447)
T ss_pred CEEEEEeeCH-HHHHHHHHHHHCC-------CEEEEEcCCCccchhHHHHHH---hcCCEEEeCC--CCHHH---hcCcC
Confidence 3699999987 9999999999998 789999886543322333332 1133333222 22222 23 48
Q ss_pred CeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHHHHH
Q 014694 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMER 129 (420)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~~~~ 129 (420)
|+||+..|... ..++++++.+.|+..+ ++.++...
T Consensus 70 d~vV~s~gi~~--~~~~~~~a~~~~i~v~---~~~el~~~ 104 (447)
T PRK02472 70 DLMVKNPGIPY--TNPMVEKALEKGIPII---TEVELAYL 104 (447)
T ss_pred CEEEECCCCCC--CCHHHHHHHHCCCcEE---eHHHHHHH
Confidence 99999998543 3588888888887544 44444333
|
|
| >PTZ00117 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.18 Score=50.21 Aligned_cols=82 Identities=13% Similarity=0.035 Sum_probs=52.7
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC-CCCCCcc-EEEEeCCCHHHHHHHH
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIP-ILTADTTDPPSLHRLC 86 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~-~~~~~~~-~i~~D~~d~~sl~~~~ 86 (420)
+.++|.|+|| |.+|..++..++..+- .++.+.++++++++...-++.. ....... .+.+ ..| .+ .+
T Consensus 4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~------~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~-~~d---~~-~l 71 (319)
T PTZ00117 4 KRKKISMIGA-GQIGSTVALLILQKNL------GDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILG-TNN---YE-DI 71 (319)
T ss_pred CCcEEEEECC-CHHHHHHHHHHHHCCC------CeEEEEECCCccchhHHHHHhhhccccCCCeEEEe-CCC---HH-Hh
Confidence 4568999997 9999999988877651 4799999998776543332321 0011111 2222 123 34 56
Q ss_pred hccCeeEeccCCCCCC
Q 014694 87 SQTKLLLNCVGPYRLH 102 (420)
Q Consensus 87 ~~~dvVIn~aGp~~~~ 102 (420)
+++|+||.++|.....
T Consensus 72 ~~ADiVVitag~~~~~ 87 (319)
T PTZ00117 72 KDSDVVVITAGVQRKE 87 (319)
T ss_pred CCCCEEEECCCCCCCC
Confidence 8999999999865443
|
|
| >cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Probab=95.10 E-value=0.1 Score=51.72 Aligned_cols=94 Identities=16% Similarity=0.050 Sum_probs=58.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHH----HHHHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPS----LHRLC 86 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~s----l~~~~ 86 (420)
-.|+|+||+|.+|..+++.+...+ .++++..++.++.+.+.+.++. .. ..|..+.++ +.+..
T Consensus 153 ~~VlI~Ga~G~vG~~aiqlAk~~G-------~~Vi~~~~~~~~~~~~~~~lGa------~~-vi~~~~~~~~~~~i~~~~ 218 (338)
T cd08295 153 ETVFVSAASGAVGQLVGQLAKLKG-------CYVVGSAGSDEKVDLLKNKLGF------DD-AFNYKEEPDLDAALKRYF 218 (338)
T ss_pred CEEEEecCccHHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHhcCC------ce-eEEcCCcccHHHHHHHhC
Confidence 479999999999999998777776 6888889999888666554641 11 233322222 22222
Q ss_pred -hccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecC
Q 014694 87 -SQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 87 -~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdis 121 (420)
.++|+||+++|. ......++ |...+-+++.+.
T Consensus 219 ~~gvd~v~d~~g~--~~~~~~~~-~l~~~G~iv~~G 251 (338)
T cd08295 219 PNGIDIYFDNVGG--KMLDAVLL-NMNLHGRIAACG 251 (338)
T ss_pred CCCcEEEEECCCH--HHHHHHHH-HhccCcEEEEec
Confidence 258999999984 11123333 334444566553
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in |
| >COG0623 FabI Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=95.09 E-value=0.13 Score=48.32 Aligned_cols=80 Identities=15% Similarity=0.139 Sum_probs=58.5
Q ss_pred ceEEEEcCC--cHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 11 FDVIILGAS--GFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 11 ~~IvV~GAT--G~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
.+++|.|-. --|+-.|++.|.++| .+++....++ ++++-++++.. .....-++.||++|.+++++++.
T Consensus 7 K~~lI~Gvan~rSIAwGIAk~l~~~G-------AeL~fTy~~e-~l~krv~~la~-~~~s~~v~~cDV~~d~~i~~~f~~ 77 (259)
T COG0623 7 KRILIMGVANNRSIAWGIAKALAEQG-------AELAFTYQGE-RLEKRVEELAE-ELGSDLVLPCDVTNDESIDALFAT 77 (259)
T ss_pred ceEEEEEecccccHHHHHHHHHHHcC-------CEEEEEeccH-HHHHHHHHHHh-hccCCeEEecCCCCHHHHHHHHHH
Confidence 478898854 348999999999998 6788777665 54444444431 11124579999999999999987
Q ss_pred ------ccCeeEeccCCC
Q 014694 88 ------QTKLLLNCVGPY 99 (420)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (420)
..|.|+|+.|..
T Consensus 78 i~~~~g~lD~lVHsIaFa 95 (259)
T COG0623 78 IKKKWGKLDGLVHSIAFA 95 (259)
T ss_pred HHHhhCcccEEEEEeccC
Confidence 469999999853
|
|
| >COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=95.07 E-value=0.17 Score=49.40 Aligned_cols=99 Identities=18% Similarity=0.260 Sum_probs=62.2
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccCe
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKL 91 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~dv 91 (420)
+|-++| .|-.|..++.+|.+.+ +.+.+.+|+++|..+.+...+. .-.++..++++++|+
T Consensus 2 kIafIG-LG~MG~pmA~~L~~aG-------~~v~v~~r~~~ka~~~~~~~Ga-------------~~a~s~~eaa~~aDv 60 (286)
T COG2084 2 KIAFIG-LGIMGSPMAANLLKAG-------HEVTVYNRTPEKAAELLAAAGA-------------TVAASPAEAAAEADV 60 (286)
T ss_pred eEEEEc-CchhhHHHHHHHHHCC-------CEEEEEeCChhhhhHHHHHcCC-------------cccCCHHHHHHhCCE
Confidence 566776 6999999999999998 8999999999995455443321 112334677788888
Q ss_pred eEeccCCCCCCcHHHHH---HH---HHcCCcEEecCC-cHHHHHHHHH
Q 014694 92 LLNCVGPYRLHGDPVAA---AC---VHSGCDYLDISG-EPEFMERMEA 132 (420)
Q Consensus 92 VIn~aGp~~~~~~~vv~---Ac---~~~g~~yvdisg-e~~~~~~~~~ 132 (420)
||.|+.....- +.|+. -. ...|..+||.|. .+...+++..
T Consensus 61 Vitmv~~~~~V-~~V~~g~~g~~~~~~~G~i~IDmSTisp~~a~~~a~ 107 (286)
T COG2084 61 VITMLPDDAAV-RAVLFGENGLLEGLKPGAIVIDMSTISPETARELAA 107 (286)
T ss_pred EEEecCCHHHH-HHHHhCccchhhcCCCCCEEEECCCCCHHHHHHHHH
Confidence 88887532110 11111 01 123666888764 4444455444
|
|
| >TIGR03693 ocin_ThiF_like putative thiazole-containing bacteriocin maturation protein | Back alignment and domain information |
|---|
Probab=94.99 E-value=0.11 Score=55.41 Aligned_cols=101 Identities=11% Similarity=0.090 Sum_probs=72.5
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHH---HH---HHHhCCCCCCCccEEEEeCCCHHHH
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVK---QA---LQWASPSHSLSIPILTADTTDPPSL 82 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~---~~---~~~l~~~~~~~~~~i~~D~~d~~sl 82 (420)
|.-+|+|+|. |.+|..++..|++.|..+ ++.+..++-.+.+. ++ .+++ .+++.+...|....+++
T Consensus 128 R~akVlVlG~-Gg~~s~lv~sL~~sG~~~----I~~vd~D~v~SNlnRIgEl~e~A~~~----n~~v~v~~i~~~~~~dl 198 (637)
T TIGR03693 128 RNAKILAAGS-GDFLTKLVRSLIDSGFPR----FHAIVTDAEEHALDRIHELAEIAEET----DDALLVQEIDFAEDQHL 198 (637)
T ss_pred hcccEEEEec-CchHHHHHHHHHhcCCCc----EEEEeccccchhhhHHHHHHHHHHHh----CCCCceEeccCCcchhH
Confidence 6678999986 668999999999998522 44454555444332 32 3332 35677777777788999
Q ss_pred HHHHhccCeeEeccCCCCCC-cHHHHHHHHHcCCcEE
Q 014694 83 HRLCSQTKLLLNCVGPYRLH-GDPVAAACVHSGCDYL 118 (420)
Q Consensus 83 ~~~~~~~dvVIn~aGp~~~~-~~~vv~Ac~~~g~~yv 118 (420)
.+.++..|+||+.+.-+... -..+-++|++.|..++
T Consensus 199 ~ev~~~~DiVi~vsDdy~~~~Lr~lN~acvkegk~~I 235 (637)
T TIGR03693 199 HEAFEPADWVLYVSDNGDIDDLHALHAFCKEEGKGFI 235 (637)
T ss_pred HHhhcCCcEEEEECCCCChHHHHHHHHHHHHcCCCeE
Confidence 99999999999999855433 3667789999996543
|
Members of this protein family are found in a three-gene operon in Bacillus anthracis and related Bacillus species, where the other two genes are clearly identified with maturation of a putative thiazole-containing bacteriocin precursor. While there is no detectable pairwise sequence similarity between members of this family and the proposed cyclodehydratases such as SagC of Streptococcus pyogenes (see family TIGR03603), both families show similarity through PSI-BLAST to ThiF, a protein involved in biosynthesis of the thiazole moiety for thiamine biosynthesis. This family, therefore, may contribute to cyclodehydratase function in heterocycle-containing bacteriocin biosyntheses. In Bacillus licheniformis ATCC 14580, the bacteriocin precursor gene is adjacent to the gene for this protein. |
| >PLN03154 putative allyl alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.97 E-value=0.1 Score=52.25 Aligned_cols=74 Identities=18% Similarity=0.135 Sum_probs=50.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHH----HHHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSL----HRLC 86 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl----~~~~ 86 (420)
-.|+|+||+|.+|..+++.+...+ .+|+++.++.++++.+.++++ ... ..|..+.+++ .+..
T Consensus 160 ~~VlV~GaaG~vG~~aiqlAk~~G-------~~Vi~~~~~~~k~~~~~~~lG------a~~-vi~~~~~~~~~~~i~~~~ 225 (348)
T PLN03154 160 DSVFVSAASGAVGQLVGQLAKLHG-------CYVVGSAGSSQKVDLLKNKLG------FDE-AFNYKEEPDLDAALKRYF 225 (348)
T ss_pred CEEEEecCccHHHHHHHHHHHHcC-------CEEEEEcCCHHHHHHHHHhcC------CCE-EEECCCcccHHHHHHHHC
Confidence 469999999999999988877766 688888899888866655564 121 2343322222 2222
Q ss_pred -hccCeeEeccCC
Q 014694 87 -SQTKLLLNCVGP 98 (420)
Q Consensus 87 -~~~dvVIn~aGp 98 (420)
.+.|+||.|+|.
T Consensus 226 ~~gvD~v~d~vG~ 238 (348)
T PLN03154 226 PEGIDIYFDNVGG 238 (348)
T ss_pred CCCcEEEEECCCH
Confidence 258999999984
|
|
| >cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively | Back alignment and domain information |
|---|
Probab=94.97 E-value=0.19 Score=49.47 Aligned_cols=99 Identities=14% Similarity=0.112 Sum_probs=57.8
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC---------------------hhHHHHHHHHhCCCCCCCcc
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN---------------------PTRVKQALQWASPSHSLSIP 70 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs---------------------~~kl~~~~~~l~~~~~~~~~ 70 (420)
+|+|+|+ |.+|..++++|+..|- -++.+++.+ ..|.+.+.+.+.. ..+.++
T Consensus 1 kVLIvGa-GGLGs~vA~~La~aGV------g~ItlvD~D~Ve~sNL~RQ~L~~~~D~~iGk~Ka~aaa~~L~~-iNP~v~ 72 (307)
T cd01486 1 KCLLLGA-GTLGCNVARNLLGWGV------RHITFVDSGKVSYSNPVRQSLFTFEDCKGGKPKAEAAAERLKE-IFPSID 72 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCC------CeEEEECCCEeccccCCcccccccchhhcCccHHHHHHHHHHH-HCCCcE
Confidence 5899988 6799999999999873 345554422 1133333333321 012233
Q ss_pred E--EEEeC----------------CCHHHHHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEe
Q 014694 71 I--LTADT----------------TDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLD 119 (420)
Q Consensus 71 ~--i~~D~----------------~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvd 119 (420)
+ +...+ .|.+.+.++++++|+||.|...+.. .--+-.+|.+.+..+|+
T Consensus 73 v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~d~tDn~es-R~L~~~~~~~~~k~~I~ 138 (307)
T cd01486 73 ATGIVLSIPMPGHPISESEVPSTLKDVKRLEELIKDHDVIFLLTDSRES-RWLPTLLSAAKNKLVIN 138 (307)
T ss_pred EEEeeeeccccccccccccccccccCHHHHHHHHhhCCEEEECCCCHHH-HHHHHHHHHHhCCcEEE
Confidence 2 22221 3567788899999999988864322 12334566666665554
|
This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole. |
| >TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=94.92 E-value=0.24 Score=48.37 Aligned_cols=60 Identities=17% Similarity=0.145 Sum_probs=43.0
Q ss_pred CCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccCeeEeccC
Q 014694 18 ASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKLLLNCVG 97 (420)
Q Consensus 18 ATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~dvVIn~aG 97 (420)
|.|.+|..+++.|++.+ ++|.+.+|+.++.+.+.+ .+ +. .. ++..++++++|+||-|+.
T Consensus 3 GlG~mG~~mA~~L~~~G-------~~V~v~dr~~~~~~~l~~-~g------~~--~~-----~s~~~~~~~advVil~vp 61 (288)
T TIGR01692 3 GLGNMGGPMAANLLKAG-------HPVRVFDLFPDAVEEAVA-AG------AQ--AA-----ASPAEAAEGADRVITMLP 61 (288)
T ss_pred cccHhHHHHHHHHHhCC-------CeEEEEeCCHHHHHHHHH-cC------Ce--ec-----CCHHHHHhcCCEEEEeCC
Confidence 46999999999999987 789999999998876654 11 11 11 124456677777777775
Q ss_pred C
Q 014694 98 P 98 (420)
Q Consensus 98 p 98 (420)
+
T Consensus 62 ~ 62 (288)
T TIGR01692 62 A 62 (288)
T ss_pred C
Confidence 4
|
This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446). |
| >cd08293 PTGR2 Prostaglandin reductase | Back alignment and domain information |
|---|
Probab=94.92 E-value=0.14 Score=50.73 Aligned_cols=94 Identities=13% Similarity=0.103 Sum_probs=60.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcc-eEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCH---HHHHHHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIK-SLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDP---PSLHRLC 86 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~-~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~---~sl~~~~ 86 (420)
-.|+|+||+|.+|..+++.+...+ . +|+++.+++++.+.+.++++. .. ..|..+. +.+.++.
T Consensus 156 ~~VlI~ga~g~vG~~aiqlAk~~G-------~~~Vi~~~~s~~~~~~~~~~lGa------~~-vi~~~~~~~~~~i~~~~ 221 (345)
T cd08293 156 QTMVVSGAAGACGSLAGQIGRLLG-------CSRVVGICGSDEKCQLLKSELGF------DA-AINYKTDNVAERLRELC 221 (345)
T ss_pred CEEEEECCCcHHHHHHHHHHHHcC-------CCEEEEEcCCHHHHHHHHHhcCC------cE-EEECCCCCHHHHHHHHC
Confidence 479999999999999988766666 5 788888999988776665641 21 2333332 2233222
Q ss_pred -hccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecC
Q 014694 87 -SQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 87 -~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdis 121 (420)
.++|+||+++|... ....+ .|.+.+-+++.+.
T Consensus 222 ~~gvd~vid~~g~~~--~~~~~-~~l~~~G~iv~~G 254 (345)
T cd08293 222 PEGVDVYFDNVGGEI--SDTVI-SQMNENSHIILCG 254 (345)
T ss_pred CCCceEEEECCCcHH--HHHHH-HHhccCCEEEEEe
Confidence 25899999998422 12333 3445555666653
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid |
| >TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type | Back alignment and domain information |
|---|
Probab=94.91 E-value=0.075 Score=53.03 Aligned_cols=101 Identities=17% Similarity=0.240 Sum_probs=71.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
.++.|+| +|..|+.-++.+....+ ..+|.+.+|+.++.+.+.+++.. ..+.+..+ ++.+++++++|
T Consensus 129 ~~lgiiG-~G~qA~~~l~al~~~~~-----~~~v~V~~r~~~~~~~~~~~~~~---~g~~v~~~-----~~~~eav~~aD 194 (325)
T TIGR02371 129 SVLGIIG-AGRQAWTQLEALSRVFD-----LEEVSVYCRTPSTREKFALRASD---YEVPVRAA-----TDPREAVEGCD 194 (325)
T ss_pred CEEEEEC-CCHHHHHHHHHHHhcCC-----CCEEEEECCCHHHHHHHHHHHHh---hCCcEEEe-----CCHHHHhccCC
Confidence 4688886 59999998888776432 26899999999999888877641 12333333 24567788999
Q ss_pred eeEeccCCCCCCcHHHHHH-HHHcCCcEEecCCcHHHHHH
Q 014694 91 LLLNCVGPYRLHGDPVAAA-CVHSGCDYLDISGEPEFMER 129 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~A-c~~~g~~yvdisge~~~~~~ 129 (420)
+||.|... .+++++. ..+.|+|.+-+....+..++
T Consensus 195 iVitaT~s----~~P~~~~~~l~~g~~v~~vGs~~p~~~E 230 (325)
T TIGR02371 195 ILVTTTPS----RKPVVKADWVSEGTHINAIGADAPGKQE 230 (325)
T ss_pred EEEEecCC----CCcEecHHHcCCCCEEEecCCCCccccc
Confidence 99987732 3466543 57889998888776666554
|
This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity. |
| >TIGR01761 thiaz-red thiazolinyl imide reductase | Back alignment and domain information |
|---|
Probab=94.91 E-value=0.19 Score=50.58 Aligned_cols=91 Identities=14% Similarity=0.239 Sum_probs=59.9
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
.+.+|.|+|+ || |+.-++.+.+..+ + .--+++++|+.++.+++.++.+ +.. . .++++++.+
T Consensus 2 ~~~rVgViG~-~~-G~~h~~al~~~~~-~---~eLvaV~d~~~erA~~~A~~~g------i~~----y---~~~eell~d 62 (343)
T TIGR01761 2 DVQSVVVCGT-RF-GQFYLAAFAAAPE-R---FELAGILAQGSERSRALAHRLG------VPL----Y---CEVEELPDD 62 (343)
T ss_pred CCcEEEEEeH-HH-HHHHHHHHHhCCC-C---cEEEEEEcCCHHHHHHHHHHhC------CCc----c---CCHHHHhcC
Confidence 4578999998 76 8887777766431 1 0236788999999988888764 221 2 335566676
Q ss_pred cCeeEeccCC--CCCCcHHHHHHHHHcCCcEE
Q 014694 89 TKLLLNCVGP--YRLHGDPVAAACVHSGCDYL 118 (420)
Q Consensus 89 ~dvVIn~aGp--~~~~~~~vv~Ac~~~g~~yv 118 (420)
.|+++-++.. .......++.+|.++|.|.+
T Consensus 63 ~Di~~V~ipt~~P~~~H~e~a~~aL~aGkHVL 94 (343)
T TIGR01761 63 IDIACVVVRSAIVGGQGSALARALLARGIHVL 94 (343)
T ss_pred CCEEEEEeCCCCCCccHHHHHHHHHhCCCeEE
Confidence 7765444321 12334788888999998843
|
This reductase is found associated with gene clusters for the biosynthesis of various non-ribosomal peptide derived natural products in which cysteine is cyclized to a thiazoline ring containing an imide double bond. Examples include yersiniabactin (irp3/YbtU) and pyochelin (PchG). |
| >PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional | Back alignment and domain information |
|---|
Probab=94.90 E-value=0.25 Score=52.26 Aligned_cols=98 Identities=14% Similarity=0.179 Sum_probs=62.1
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCC----------
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTD---------- 78 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d---------- 78 (420)
.+-+|+|+|+ |-+|...+..+...| .+|.+.+++.++++. .++++ .+++..|..+
T Consensus 164 pg~kVlViGa-G~iGL~Ai~~Ak~lG-------A~V~a~D~~~~rle~-aeslG------A~~v~i~~~e~~~~~~gya~ 228 (509)
T PRK09424 164 PPAKVLVIGA-GVAGLAAIGAAGSLG-------AIVRAFDTRPEVAEQ-VESMG------AEFLELDFEEEGGSGDGYAK 228 (509)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHH-HHHcC------CeEEEeccccccccccchhh
Confidence 3568999997 999999999988877 679999999999864 44464 2333333211
Q ss_pred ----H--HH----HHHHHhccCeeEeccCCCCC-Cc----HHHHHHHHHcCCcEEecCC
Q 014694 79 ----P--PS----LHRLCSQTKLLLNCVGPYRL-HG----DPVAAACVHSGCDYLDISG 122 (420)
Q Consensus 79 ----~--~s----l~~~~~~~dvVIn~aGp~~~-~~----~~vv~Ac~~~g~~yvdisg 122 (420)
. +. +.+.++++|+||+|+|.... .. +..++.+ +.|...+|++-
T Consensus 229 ~~s~~~~~~~~~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~m-kpGgvIVdvg~ 286 (509)
T PRK09424 229 VMSEEFIKAEMALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASM-KPGSVIVDLAA 286 (509)
T ss_pred hcchhHHHHHHHHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhc-CCCCEEEEEcc
Confidence 1 11 12223579999999985321 11 2333333 34556788763
|
|
| >TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit | Back alignment and domain information |
|---|
Probab=94.88 E-value=0.18 Score=53.23 Aligned_cols=98 Identities=17% Similarity=0.255 Sum_probs=64.9
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCC------------
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTT------------ 77 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~------------ 77 (420)
+-+++|+|+ |-+|...+..+...+ ..|.+.+++.++++.. ++++ .+++..|..
T Consensus 164 ~akVlViGa-G~iGl~Aa~~ak~lG-------A~V~v~d~~~~rle~a-~~lG------a~~v~v~~~e~g~~~~gYa~~ 228 (511)
T TIGR00561 164 PAKVLVIGA-GVAGLAAIGAANSLG-------AIVRAFDTRPEVKEQV-QSMG------AEFLELDFKEEGGSGDGYAKV 228 (511)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHH-HHcC------CeEEeccccccccccccceee
Confidence 458999997 999999999988887 5799999999887544 4454 233333321
Q ss_pred --CHHH------HHHHHhccCeeEecc---CC-C-CCCcHHHHHHHHHcCCcEEecCCc
Q 014694 78 --DPPS------LHRLCSQTKLLLNCV---GP-Y-RLHGDPVAAACVHSGCDYLDISGE 123 (420)
Q Consensus 78 --d~~s------l~~~~~~~dvVIn~a---Gp-~-~~~~~~vv~Ac~~~g~~yvdisge 123 (420)
++.. +.+.++++|+||+|+ |- . ....+..++. .+.|...||++-+
T Consensus 229 ~s~~~~~~~~~~~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~-MKpGsvIVDlA~d 286 (511)
T TIGR00561 229 MSEEFIAAEMELFAAQAKEVDIIITTALIPGKPAPKLITEEMVDS-MKAGSVIVDLAAE 286 (511)
T ss_pred cCHHHHHHHHHHHHHHhCCCCEEEECcccCCCCCCeeehHHHHhh-CCCCCEEEEeeeC
Confidence 1111 455667899999999 41 1 1223444444 3556778888743
|
In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff. |
| >PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=94.85 E-value=0.048 Score=53.88 Aligned_cols=40 Identities=20% Similarity=0.208 Sum_probs=34.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQAL 58 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~ 58 (420)
++|.|+| +|.+|..++..|++++ ++|.+.+|++++++...
T Consensus 3 ~~V~VIG-~G~mG~~iA~~la~~G-------~~V~v~d~~~~~~~~~~ 42 (308)
T PRK06129 3 GSVAIIG-AGLIGRAWAIVFARAG-------HEVRLWDADPAAAAAAP 42 (308)
T ss_pred cEEEEEC-ccHHHHHHHHHHHHCC-------CeeEEEeCCHHHHHHHH
Confidence 3799999 6999999999999988 79999999988776543
|
|
| >COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=94.81 E-value=0.12 Score=51.00 Aligned_cols=82 Identities=21% Similarity=0.137 Sum_probs=55.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC-CCCCCc-cEEEEeCCCHHHHHHHHhc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSI-PILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~-~~~~~~-~~i~~D~~d~~sl~~~~~~ 88 (420)
++|.|+|| |++|+.++-.|+.... ...+.+.++++++.+-...++.. ...... ..+..| .| -+.+++
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~-----~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~----y~~~~~ 69 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGL-----GSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GD----YEDLKG 69 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcccc-----cceEEEEEcccccccchhcchhhcchhccCceEEecC-CC----hhhhcC
Confidence 47999999 9999999999966652 13899999997777655555532 000111 122222 22 456789
Q ss_pred cCeeEeccCCCCCCc
Q 014694 89 TKLLLNCVGPYRLHG 103 (420)
Q Consensus 89 ~dvVIn~aGp~~~~~ 103 (420)
+|+||-+||.-+..|
T Consensus 70 aDiVvitAG~prKpG 84 (313)
T COG0039 70 ADIVVITAGVPRKPG 84 (313)
T ss_pred CCEEEEeCCCCCCCC
Confidence 999999999766554
|
|
| >TIGR00036 dapB dihydrodipicolinate reductase | Back alignment and domain information |
|---|
Probab=94.68 E-value=0.14 Score=49.66 Aligned_cols=94 Identities=16% Similarity=0.134 Sum_probs=55.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceE-EEEecCh-hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNP-TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v-~iagRs~-~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
++|.|+|++|.+|+.+++.+.++.. +++ .+.+|+. ++..+-..++. ......+.. ..|.+.+ ...
T Consensus 2 ikV~IiGa~G~MG~~i~~~i~~~~~------~elvav~d~~~~~~~~~~~~~~~--~~~~~gv~~--~~d~~~l---~~~ 68 (266)
T TIGR00036 2 IKVAVAGAAGRMGRELIKAALAAEG------LQLVAAFERHGSSLQGTDAGELA--GIGKVGVPV--TDDLEAV---ETD 68 (266)
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCC------CEEEEEEecCCccccCCCHHHhc--CcCcCCcee--eCCHHHh---cCC
Confidence 5899999999999999999887631 454 4456442 22111111111 000111111 1243433 356
Q ss_pred cCeeEeccCCCCCCcHHHHHHHHHcCCcEEe
Q 014694 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLD 119 (420)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvd 119 (420)
+|+||-+..|.. ...+++.|.++|+|.|-
T Consensus 69 ~DvVIdfT~p~~--~~~~~~~al~~g~~vVi 97 (266)
T TIGR00036 69 PDVLIDFTTPEG--VLNHLKFALEHGVRLVV 97 (266)
T ss_pred CCEEEECCChHH--HHHHHHHHHHCCCCEEE
Confidence 899988886633 36788888999988765
|
|
| >TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating | Back alignment and domain information |
|---|
Probab=94.67 E-value=0.21 Score=52.38 Aligned_cols=41 Identities=15% Similarity=0.221 Sum_probs=35.3
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHH
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQW 60 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~ 60 (420)
+|-|+| .|-.|..+++.|++++ ++|.+.+|++++.+.+.+.
T Consensus 1 ~IG~IG-LG~MG~~mA~nL~~~G-------~~V~v~drt~~~~~~l~~~ 41 (467)
T TIGR00873 1 DIGVIG-LAVMGSNLALNMADHG-------FTVSVYNRTPEKTDEFLAE 41 (467)
T ss_pred CEEEEe-eHHHHHHHHHHHHhcC-------CeEEEEeCCHHHHHHHHhh
Confidence 366776 5999999999999998 7999999999999887764
|
This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason. |
| >PRK06476 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=94.67 E-value=0.14 Score=49.16 Aligned_cols=72 Identities=14% Similarity=0.206 Sum_probs=50.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
|+|.|+| +|.+|+.+++.|.+.+.. ...+.+.+|+.++.+++.+... .+. .+ .+ ..++++++|
T Consensus 1 m~IgiIG-~G~mG~aia~~L~~~g~~----~~~i~v~~r~~~~~~~l~~~~~-----~~~--~~--~~---~~~~~~~aD 63 (258)
T PRK06476 1 MKIGFIG-TGAITEAMVTGLLTSPAD----VSEIIVSPRNAQIAARLAERFP-----KVR--IA--KD---NQAVVDRSD 63 (258)
T ss_pred CeEEEEC-cCHHHHHHHHHHHhCCCC----hheEEEECCCHHHHHHHHHHcC-----Cce--Ee--CC---HHHHHHhCC
Confidence 3688998 699999999999987621 1356788999999877766431 111 11 23 344567899
Q ss_pred eeEeccCCC
Q 014694 91 LLLNCVGPY 99 (420)
Q Consensus 91 vVIn~aGp~ 99 (420)
+||-|+.|.
T Consensus 64 vVilav~p~ 72 (258)
T PRK06476 64 VVFLAVRPQ 72 (258)
T ss_pred EEEEEeCHH
Confidence 999999763
|
|
| >PRK11880 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=94.67 E-value=0.19 Score=48.39 Aligned_cols=71 Identities=14% Similarity=0.158 Sum_probs=50.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
++|.|+|+ |.+|..+++.|.+.+.. ..++.+.+|+.++.+++.+.++ +.+ . .+ ..+.+.++|
T Consensus 3 m~I~iIG~-G~mG~~la~~l~~~g~~----~~~v~v~~r~~~~~~~~~~~~g------~~~--~--~~---~~~~~~~ad 64 (267)
T PRK11880 3 KKIGFIGG-GNMASAIIGGLLASGVP----AKDIIVSDPSPEKRAALAEEYG------VRA--A--TD---NQEAAQEAD 64 (267)
T ss_pred CEEEEEec-hHHHHHHHHHHHhCCCC----cceEEEEcCCHHHHHHHHHhcC------Cee--c--CC---hHHHHhcCC
Confidence 57999986 99999999999887521 1578899999988877665432 111 1 12 334467899
Q ss_pred eeEeccCCC
Q 014694 91 LLLNCVGPY 99 (420)
Q Consensus 91 vVIn~aGp~ 99 (420)
+||-|+-|+
T Consensus 65 vVil~v~~~ 73 (267)
T PRK11880 65 VVVLAVKPQ 73 (267)
T ss_pred EEEEEcCHH
Confidence 999888654
|
|
| >cd05290 LDH_3 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=94.63 E-value=0.17 Score=50.12 Aligned_cols=77 Identities=22% Similarity=0.274 Sum_probs=54.2
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC-CC-C--CCccEEEEeCCCHHHHHHHHh
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SH-S--LSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~-~~-~--~~~~~i~~D~~d~~sl~~~~~ 87 (420)
+|.|+|| |.+|..++..|+..+-. -++.+.+.++++++....+|.. .. . .++.+. . .| -+.++
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~~~~~~-----~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~-~--~~----y~~~~ 67 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALALGLF-----SEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIR-A--GD----YDDCA 67 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHhcCCC-----CEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEE-E--CC----HHHhC
Confidence 5889998 99999999999886521 3799999998887766666642 00 0 122222 2 23 45688
Q ss_pred ccCeeEeccCCCCC
Q 014694 88 QTKLLLNCVGPYRL 101 (420)
Q Consensus 88 ~~dvVIn~aGp~~~ 101 (420)
++|+||-+||....
T Consensus 68 ~aDivvitaG~~~k 81 (307)
T cd05290 68 DADIIVITAGPSID 81 (307)
T ss_pred CCCEEEECCCCCCC
Confidence 99999999996543
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=94.60 E-value=0.25 Score=51.83 Aligned_cols=100 Identities=20% Similarity=0.240 Sum_probs=64.3
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh-hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~-~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
..+|+|+|+ |.+|..+++.|.+.+ .+|.+.+++. +....+.+.+. ..++++...+-.+ ....
T Consensus 16 ~~~v~viG~-G~~G~~~A~~L~~~G-------~~V~~~d~~~~~~~~~~~~~l~---~~gv~~~~~~~~~------~~~~ 78 (480)
T PRK01438 16 GLRVVVAGL-GVSGFAAADALLELG-------ARVTVVDDGDDERHRALAAILE---ALGATVRLGPGPT------LPED 78 (480)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCC-------CEEEEEeCCchhhhHHHHHHHH---HcCCEEEECCCcc------ccCC
Confidence 347999997 889999999999887 7899988654 23333333332 1245554432111 2356
Q ss_pred cCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHHHHHHH
Q 014694 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERME 131 (420)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~~~~~~ 131 (420)
+|+||-+.|.- ...+++..|.+.|+.. -++.++.-.+.
T Consensus 79 ~D~Vv~s~Gi~--~~~~~~~~a~~~gi~v---~~~~e~~~~~~ 116 (480)
T PRK01438 79 TDLVVTSPGWR--PDAPLLAAAADAGIPV---WGEVELAWRLR 116 (480)
T ss_pred CCEEEECCCcC--CCCHHHHHHHHCCCee---cchHHHHHHhh
Confidence 89999887753 3357788888888655 46777654433
|
|
| >PTZ00082 L-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.58 E-value=0.29 Score=48.75 Aligned_cols=83 Identities=8% Similarity=-0.017 Sum_probs=51.9
Q ss_pred CCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC-CCCCCcc-EEEEeCCCHHHHHH
Q 014694 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIP-ILTADTTDPPSLHR 84 (420)
Q Consensus 7 ~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~-~~~~~~~-~i~~D~~d~~sl~~ 84 (420)
+-+..+|.|+|| |.+|..++..++..+- ..+.+.++++++++...-++.. ....... -+.. ..| . +
T Consensus 3 ~~~~~KI~IIGa-G~vG~~ia~~la~~gl------~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~-~~d---~-~ 70 (321)
T PTZ00082 3 MIKRRKISLIGS-GNIGGVMAYLIVLKNL------GDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIG-TNN---Y-E 70 (321)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCC------CeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEE-CCC---H-H
Confidence 334568999995 9999999998887661 3799999998865322221111 0011111 1222 133 2 3
Q ss_pred HHhccCeeEeccCCCCC
Q 014694 85 LCSQTKLLLNCVGPYRL 101 (420)
Q Consensus 85 ~~~~~dvVIn~aGp~~~ 101 (420)
.++++|+||+++|....
T Consensus 71 ~l~~aDiVI~tag~~~~ 87 (321)
T PTZ00082 71 DIAGSDVVIVTAGLTKR 87 (321)
T ss_pred HhCCCCEEEECCCCCCC
Confidence 56899999999986543
|
|
| >PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.51 E-value=0.14 Score=50.91 Aligned_cols=77 Identities=14% Similarity=0.059 Sum_probs=52.2
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC-CCCCCcc----EEEEeCCCHHHHHH
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIP----ILTADTTDPPSLHR 84 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~-~~~~~~~----~i~~D~~d~~sl~~ 84 (420)
.|+|.|+|+ |-+|..++..|++.+ ++|.+.+|++++.+.+.+.... ....... +... +++.+
T Consensus 4 ~m~I~iIG~-G~mG~~ia~~L~~~G-------~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~-----~~~~e 70 (328)
T PRK14618 4 GMRVAVLGA-GAWGTALAVLAASKG-------VPVRLWARRPEFAAALAAERENREYLPGVALPAELYPT-----ADPEE 70 (328)
T ss_pred CCeEEEECc-CHHHHHHHHHHHHCC-------CeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEe-----CCHHH
Confidence 468999986 999999999999987 7899999998887766542110 0000111 1111 23445
Q ss_pred HHhccCeeEeccCCC
Q 014694 85 LCSQTKLLLNCVGPY 99 (420)
Q Consensus 85 ~~~~~dvVIn~aGp~ 99 (420)
.++++|+||-|+-..
T Consensus 71 ~~~~aD~Vi~~v~~~ 85 (328)
T PRK14618 71 ALAGADFAVVAVPSK 85 (328)
T ss_pred HHcCCCEEEEECchH
Confidence 678899999888654
|
|
| >COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=94.51 E-value=0.13 Score=48.94 Aligned_cols=95 Identities=17% Similarity=0.242 Sum_probs=68.3
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
.++|+|+|||+= ++.+++.|...+.. ..-..+++|..+- .++. ...+.+-.-+.+.+.+.++
T Consensus 2 ~~~ilvlGGT~D-ar~la~~L~~~~~~----~~~ss~t~~g~~l----~~~~-------~~~~~~G~l~~e~l~~~l~e~ 65 (257)
T COG2099 2 MMRILLLGGTSD-ARALAKKLAAAPVD----IILSSLTGYGAKL----AEQI-------GPVRVGGFLGAEGLAAFLREE 65 (257)
T ss_pred CceEEEEeccHH-HHHHHHHhhccCcc----EEEEEcccccccc----hhcc-------CCeeecCcCCHHHHHHHHHHc
Confidence 367999999984 89999999887510 0111223343222 2221 2356667778899999987
Q ss_pred ccCeeEeccCCCCC-CcHHHHHHHHHcCCcEEec
Q 014694 88 QTKLLLNCVGPYRL-HGDPVAAACVHSGCDYLDI 120 (420)
Q Consensus 88 ~~dvVIn~aGp~~~-~~~~vv~Ac~~~g~~yvdi 120 (420)
++|+||.+.-||.. ...|.+++|.+.|+.|+-+
T Consensus 66 ~i~llIDATHPyAa~iS~Na~~aake~gipy~r~ 99 (257)
T COG2099 66 GIDLLIDATHPYAARISQNAARAAKETGIPYLRL 99 (257)
T ss_pred CCCEEEECCChHHHHHHHHHHHHHHHhCCcEEEE
Confidence 68999999999854 4699999999999999987
|
|
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=94.50 E-value=0.15 Score=46.19 Aligned_cols=66 Identities=21% Similarity=0.123 Sum_probs=46.9
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
+..+|.|+|- |-||+.+++.+..-+ .+|...+|+....... ... .+ . ..++++++++
T Consensus 35 ~g~tvgIiG~-G~IG~~vA~~l~~fG-------~~V~~~d~~~~~~~~~-~~~--------~~-~-----~~~l~ell~~ 91 (178)
T PF02826_consen 35 RGKTVGIIGY-GRIGRAVARRLKAFG-------MRVIGYDRSPKPEEGA-DEF--------GV-E-----YVSLDELLAQ 91 (178)
T ss_dssp TTSEEEEEST-SHHHHHHHHHHHHTT--------EEEEEESSCHHHHHH-HHT--------TE-E-----ESSHHHHHHH
T ss_pred CCCEEEEEEE-cCCcCeEeeeeecCC-------ceeEEecccCChhhhc-ccc--------cc-e-----eeehhhhcch
Confidence 4458999975 999999999999887 8999999988765411 111 11 1 2357889999
Q ss_pred cCeeEeccC
Q 014694 89 TKLLLNCVG 97 (420)
Q Consensus 89 ~dvVIn~aG 97 (420)
+|+|++++-
T Consensus 92 aDiv~~~~p 100 (178)
T PF02826_consen 92 ADIVSLHLP 100 (178)
T ss_dssp -SEEEE-SS
T ss_pred hhhhhhhhc
Confidence 999988774
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >PRK06823 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=94.50 E-value=0.11 Score=51.64 Aligned_cols=101 Identities=15% Similarity=0.250 Sum_probs=73.4
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
..+.|+| +|..++.-++.++.-.+ .-+|.+.+|+.++.+++.+++.. ..+.+..+ ++.+++++++|
T Consensus 129 ~~l~iiG-~G~qA~~~~~a~~~v~~-----i~~v~v~~r~~~~a~~~~~~~~~---~~~~v~~~-----~~~~~av~~AD 194 (315)
T PRK06823 129 SAIGIVG-TGIQARMQLMYLKNVTD-----CRQLWVWGRSETALEEYRQYAQA---LGFAVNTT-----LDAAEVAHAAN 194 (315)
T ss_pred CEEEEEC-CcHHHHHHHHHHHhcCC-----CCEEEEECCCHHHHHHHHHHHHh---cCCcEEEE-----CCHHHHhcCCC
Confidence 4688887 59999999998887542 26899999999999988877641 23444444 34688889999
Q ss_pred eeEeccCCCCCCcHHHHHH-HHHcCCcEEecCCcHHHHHH
Q 014694 91 LLLNCVGPYRLHGDPVAAA-CVHSGCDYLDISGEPEFMER 129 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~A-c~~~g~~yvdisge~~~~~~ 129 (420)
+|+.|..- .++++++ ..+.|+|..-+....+..++
T Consensus 195 IV~taT~s----~~P~~~~~~l~~G~hi~~iGs~~p~~~E 230 (315)
T PRK06823 195 LIVTTTPS----REPLLQAEDIQPGTHITAVGADSPGKQE 230 (315)
T ss_pred EEEEecCC----CCceeCHHHcCCCcEEEecCCCCccccc
Confidence 99977642 2466643 55788998888766666554
|
|
| >TIGR03736 PRTRC_ThiF PRTRC system ThiF family protein | Back alignment and domain information |
|---|
Probab=94.47 E-value=0.3 Score=46.74 Aligned_cols=99 Identities=11% Similarity=0.130 Sum_probs=54.8
Q ss_pred CCcceEEEEcCCcHHHHHHHHHHHHhCCC----CCCCcceEEEEecCh------------------hHHHHHHHHhCCCC
Q 014694 8 PELFDVIILGASGFTGKYVVREALKLFNF----PSSPIKSLALAGRNP------------------TRVKQALQWASPSH 65 (420)
Q Consensus 8 ~~~~~IvV~GATG~~G~~va~~L~~~~~~----~~~~~~~v~iagRs~------------------~kl~~~~~~l~~~~ 65 (420)
.++.+|+|+|+ |.+|..+++.|++.+-. +.....++.+++.+. .|.+.+.+.+....
T Consensus 9 ~~~~~V~vvG~-GGlGs~v~~~Lar~G~a~~~~G~~~g~~i~lvD~D~Ve~sNLnRQlf~~~dVG~~Ka~v~~~ri~~~~ 87 (244)
T TIGR03736 9 SRPVSVVLVGA-GGTGSQVIAGLARLHHALKALGHPGGLAVTVYDDDTVSEANVGRQAFYPADVGQNKAIVLVNRLNQAM 87 (244)
T ss_pred hCCCeEEEEcC-ChHHHHHHHHHHHccccccccCCCCCCEEEEECCCEEccchhhcccCChhHCCcHHHHHHHHHHHhcc
Confidence 46789999998 77999999999986410 000013777777541 23333444443101
Q ss_pred CCCccEEEEeCCCHHHHHHHHhccCeeEeccCCCCCCcHHHHHHHHH
Q 014694 66 SLSIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVH 112 (420)
Q Consensus 66 ~~~~~~i~~D~~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~ 112 (420)
..+++.+...+.. + ....++|+||+|+--.. ....+.+.|.+
T Consensus 88 ~~~i~a~~~~~~~-~---~~~~~~DiVi~avDn~~-aR~~l~~~~~~ 129 (244)
T TIGR03736 88 GTDWTAHPERVER-S---STLHRPDIVIGCVDNRA-ARLAILRAFEG 129 (244)
T ss_pred CceEEEEEeeeCc-h---hhhcCCCEEEECCCCHH-HHHHHHHHHHH
Confidence 1122333333333 1 22457899998886332 12445677766
|
A novel genetic system characterized by six major proteins, included a ParB homolog and a ThiF homolog, is designated PRTRC, or ParB-Related,ThiF-Related Cassette. This family is the PRTRC system ThiF family protein. |
| >PRK07680 late competence protein ComER; Validated | Back alignment and domain information |
|---|
Probab=94.46 E-value=0.16 Score=49.27 Aligned_cols=94 Identities=18% Similarity=0.330 Sum_probs=59.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
|+|.|+| .|-+|..+++.|.+.+... ..++.+.+|+.++.+.+.++.. .+. .. .+ ..+++.++|
T Consensus 1 m~I~iIG-~G~mG~ala~~L~~~g~~~---~~~v~v~~r~~~~~~~~~~~~~-----g~~--~~--~~---~~~~~~~aD 64 (273)
T PRK07680 1 MNIGFIG-TGNMGTILIEAFLESGAVK---PSQLTITNRTPAKAYHIKERYP-----GIH--VA--KT---IEEVISQSD 64 (273)
T ss_pred CEEEEEC-ccHHHHHHHHHHHHCCCCC---cceEEEECCCHHHHHHHHHHcC-----CeE--EE--CC---HHHHHHhCC
Confidence 4689999 5999999999999876100 1368999999988876655331 121 11 12 334567899
Q ss_pred eeEeccCCCCCCcHHHHHHHHH---cCCcEEecCC
Q 014694 91 LLLNCVGPYRLHGDPVAAACVH---SGCDYLDISG 122 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~Ac~~---~g~~yvdisg 122 (420)
+||-|+-|... ..+++.... .+...|++++
T Consensus 65 iVilav~p~~~--~~vl~~l~~~l~~~~~iis~~a 97 (273)
T PRK07680 65 LIFICVKPLDI--YPLLQKLAPHLTDEHCLVSITS 97 (273)
T ss_pred EEEEecCHHHH--HHHHHHHHhhcCCCCEEEEECC
Confidence 99999965432 344444332 2345666665
|
|
| >TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Probab=94.39 E-value=0.17 Score=49.89 Aligned_cols=93 Identities=13% Similarity=-0.015 Sum_probs=59.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH----
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC---- 86 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~---- 86 (420)
-.|+|+||+|.+|..+++.+...+ .++++..++.++.+.+ .+++ .. ...|..+.+.+.+.+
T Consensus 140 ~~VLI~ga~g~vG~~aiqlAk~~G-------~~Vi~~~~s~~~~~~~-~~lG------a~-~vi~~~~~~~~~~~~~~~~ 204 (325)
T TIGR02825 140 ETVMVNAAAGAVGSVVGQIAKLKG-------CKVVGAAGSDEKVAYL-KKLG------FD-VAFNYKTVKSLEETLKKAS 204 (325)
T ss_pred CEEEEeCCccHHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHH-HHcC------CC-EEEeccccccHHHHHHHhC
Confidence 479999999999999988776666 6888889998887655 4454 12 123333322232222
Q ss_pred -hccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecC
Q 014694 87 -SQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 87 -~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdis 121 (420)
.+.|+||+++|... ... .-.|.+.+-+++.+.
T Consensus 205 ~~gvdvv~d~~G~~~--~~~-~~~~l~~~G~iv~~G 237 (325)
T TIGR02825 205 PDGYDCYFDNVGGEF--SNT-VIGQMKKFGRIAICG 237 (325)
T ss_pred CCCeEEEEECCCHHH--HHH-HHHHhCcCcEEEEec
Confidence 25899999998421 122 234455566677653
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. |
| >PRK07417 arogenate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=94.34 E-value=0.17 Score=49.14 Aligned_cols=67 Identities=18% Similarity=0.245 Sum_probs=48.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
|+|.|+| .|.+|..++..|.+.+ ++|.+.+|+++++++..+. + .+. ....+ . +.++++|
T Consensus 1 m~I~IIG-~G~mG~sla~~L~~~g-------~~V~~~d~~~~~~~~a~~~-g-----~~~---~~~~~---~-~~~~~aD 59 (279)
T PRK07417 1 MKIGIVG-LGLIGGSLGLDLRSLG-------HTVYGVSRRESTCERAIER-G-----LVD---EASTD---L-SLLKDCD 59 (279)
T ss_pred CeEEEEe-ecHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHC-C-----Ccc---cccCC---H-hHhcCCC
Confidence 4789998 6999999999999887 7899999999887665432 1 011 11112 1 2467899
Q ss_pred eeEeccCC
Q 014694 91 LLLNCVGP 98 (420)
Q Consensus 91 vVIn~aGp 98 (420)
+||-|+-+
T Consensus 60 lVilavp~ 67 (279)
T PRK07417 60 LVILALPI 67 (279)
T ss_pred EEEEcCCH
Confidence 99998854
|
|
| >PRK07589 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=94.33 E-value=0.14 Score=51.66 Aligned_cols=103 Identities=11% Similarity=0.179 Sum_probs=72.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
-.+.|+|+ |..++.-++.++.-.+ .-+|.+.+|+.++.+++.+++.. ..+++..+ ++++++++++|
T Consensus 130 ~~l~iiGa-G~QA~~~l~a~~~vr~-----i~~V~v~~r~~~~a~~~~~~~~~---~~~~v~~~-----~~~~~av~~AD 195 (346)
T PRK07589 130 RTMALIGN-GAQSEFQALAFKALLG-----IEEIRLYDIDPAATAKLARNLAG---PGLRIVAC-----RSVAEAVEGAD 195 (346)
T ss_pred cEEEEECC-cHHHHHHHHHHHHhCC-----ceEEEEEeCCHHHHHHHHHHHHh---cCCcEEEe-----CCHHHHHhcCC
Confidence 36888875 9999999988887552 26899999999999999888752 23455444 34788999999
Q ss_pred eeEeccCCCCCCcHHHHHH-HHHcCCcEEecCCcHHHHHH
Q 014694 91 LLLNCVGPYRLHGDPVAAA-CVHSGCDYLDISGEPEFMER 129 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~A-c~~~g~~yvdisge~~~~~~ 129 (420)
+|+.|.. .. ...++++. ..+.|+|..-+-...+.+++
T Consensus 196 IIvtaT~-S~-~~~Pvl~~~~lkpG~hV~aIGs~~p~~~E 233 (346)
T PRK07589 196 IITTVTA-DK-TNATILTDDMVEPGMHINAVGGDCPGKTE 233 (346)
T ss_pred EEEEecC-CC-CCCceecHHHcCCCcEEEecCCCCCCccc
Confidence 9997773 21 11255543 56788887666555555544
|
|
| >PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=94.32 E-value=0.15 Score=45.64 Aligned_cols=73 Identities=15% Similarity=0.215 Sum_probs=50.5
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEe-------------
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTAD------------- 75 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D------------- 75 (420)
++.+|+|+|+ |-+|+..++-+...+ .++.+.+.+.+++++... .. ...+..+
T Consensus 19 ~p~~vvv~G~-G~vg~gA~~~~~~lG-------a~v~~~d~~~~~~~~~~~-~~------~~~i~~~~~~~~~~~~~~~~ 83 (168)
T PF01262_consen 19 PPAKVVVTGA-GRVGQGAAEIAKGLG-------AEVVVPDERPERLRQLES-LG------AYFIEVDYEDHLERKDFDKA 83 (168)
T ss_dssp -T-EEEEEST-SHHHHHHHHHHHHTT--------EEEEEESSHHHHHHHHH-TT------TEESEETTTTTTTSB-CCHH
T ss_pred CCeEEEEECC-CHHHHHHHHHHhHCC-------CEEEeccCCHHHHHhhhc-cc------CceEEEcccccccccccchh
Confidence 5578999985 999999999998887 899999999888765533 22 2233332
Q ss_pred ------CCCHHHHHHHHhccCeeEecc
Q 014694 76 ------TTDPPSLHRLCSQTKLLLNCV 96 (420)
Q Consensus 76 ------~~d~~sl~~~~~~~dvVIn~a 96 (420)
..+...+.+.++.+|+||+++
T Consensus 84 ~~~~~~~~~~~~f~~~i~~~d~vI~~~ 110 (168)
T PF01262_consen 84 DYYEHPESYESNFAEFIAPADIVIGNG 110 (168)
T ss_dssp HCHHHCCHHHHHHHHHHHH-SEEEEHH
T ss_pred hhhHHHHHhHHHHHHHHhhCcEEeeec
Confidence 223457888888999998655
|
4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A .... |
| >PRK13301 putative L-aspartate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.30 E-value=0.46 Score=45.90 Aligned_cols=100 Identities=18% Similarity=0.198 Sum_probs=66.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceE-EEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-Hhc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CSQ 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v-~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~-~~~ 88 (420)
++|-|+|- |.+|+.|++.|.+.... .+++ .+.+|+.++.+++.+. ++ . + ++++++ ...
T Consensus 3 ~rvgiIG~-GaIG~~va~~l~~~~~~----~~~l~~V~~~~~~~~~~~~~~--------~~--~--~---~~l~~ll~~~ 62 (267)
T PRK13301 3 HRIAFIGL-GAIASDVAAGLLADAAQ----PCQLAALTRNAADLPPALAGR--------VA--L--L---DGLPGLLAWR 62 (267)
T ss_pred eEEEEECc-cHHHHHHHHHHhcCCCC----ceEEEEEecCCHHHHHHhhcc--------Cc--c--c---CCHHHHhhcC
Confidence 57888875 99999999998775321 1444 4455666665544321 11 1 1 235564 578
Q ss_pred cCeeEeccCCCCCCcHHHHHHHHHcCCcEEecC----CcHHHHHHHHH
Q 014694 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS----GEPEFMERMEA 132 (420)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdis----ge~~~~~~~~~ 132 (420)
+|+||-||++-.. ......+.++|++++-+| .+..+.+++.+
T Consensus 63 ~DlVVE~A~~~av--~e~~~~iL~~g~dlvv~SvGALaD~~~~~~l~~ 108 (267)
T PRK13301 63 PDLVVEAAGQQAI--AEHAEGCLTAGLDMIICSAGALADDALRARLIA 108 (267)
T ss_pred CCEEEECCCHHHH--HHHHHHHHhcCCCEEEEChhHhcCHHHHHHHHH
Confidence 9999999997443 455677888999998888 45556666665
|
|
| >PRK12491 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=94.30 E-value=0.19 Score=48.79 Aligned_cols=73 Identities=14% Similarity=0.168 Sum_probs=51.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
++|.++| .|.+|..+++.|.+.+.. ...++.+.+|++++++.+.++++ +. .+ .| ..++++++|
T Consensus 3 ~~IgfIG-~G~MG~aia~~L~~~g~~---~~~~I~v~~r~~~~~~~l~~~~g------~~--~~--~~---~~e~~~~aD 65 (272)
T PRK12491 3 KQIGFIG-CGNMGIAMIGGMINKNIV---SPDQIICSDLNVSNLKNASDKYG------IT--IT--TN---NNEVANSAD 65 (272)
T ss_pred CeEEEEC-ccHHHHHHHHHHHHCCCC---CCceEEEECCCHHHHHHHHHhcC------cE--Ee--CC---cHHHHhhCC
Confidence 4699998 599999999999987520 01478899999999877665442 21 12 12 334567899
Q ss_pred eeEeccCCCC
Q 014694 91 LLLNCVGPYR 100 (420)
Q Consensus 91 vVIn~aGp~~ 100 (420)
+||-|+-|..
T Consensus 66 iIiLavkP~~ 75 (272)
T PRK12491 66 ILILSIKPDL 75 (272)
T ss_pred EEEEEeChHH
Confidence 9999998743
|
|
| >PRK06046 alanine dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=94.30 E-value=0.12 Score=51.59 Aligned_cols=101 Identities=16% Similarity=0.289 Sum_probs=68.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
.+|.|+| +|..|+..++.+....+ ..++.+.+|+.++.+++.+++.. ...+.+...+ | +++++. +|
T Consensus 130 ~~vgiiG-~G~qa~~h~~al~~~~~-----i~~v~v~~r~~~~~~~~~~~~~~--~~~~~v~~~~--~---~~~~l~-aD 195 (326)
T PRK06046 130 KVVGIIG-AGNQARTQLLALSEVFD-----LEEVRVYDRTKSSAEKFVERMSS--VVGCDVTVAE--D---IEEACD-CD 195 (326)
T ss_pred CEEEEEC-CcHHHHHHHHHHHhhCC-----ceEEEEECCCHHHHHHHHHHHHh--hcCceEEEeC--C---HHHHhh-CC
Confidence 4788996 58899999998876532 25789999999999988887641 1122222222 3 455565 99
Q ss_pred eeEeccCCCCCCcHHHHHH-HHHcCCcEEecCCcHHHHHH
Q 014694 91 LLLNCVGPYRLHGDPVAAA-CVHSGCDYLDISGEPEFMER 129 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~A-c~~~g~~yvdisge~~~~~~ 129 (420)
+|++|.... ++++++ ..+.|+|...+....+..++
T Consensus 196 iVv~aTps~----~P~~~~~~l~~g~hV~~iGs~~p~~~E 231 (326)
T PRK06046 196 ILVTTTPSR----KPVVKAEWIKEGTHINAIGADAPGKQE 231 (326)
T ss_pred EEEEecCCC----CcEecHHHcCCCCEEEecCCCCCcccc
Confidence 999887532 466544 35789998888776666554
|
|
| >cd05295 MDH_like Malate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=94.28 E-value=0.23 Score=51.61 Aligned_cols=90 Identities=14% Similarity=0.009 Sum_probs=60.3
Q ss_pred CCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEec--ChhHHHHHHHHhCC---CCCCCccEEEEeCCCHHH
Q 014694 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR--NPTRVKQALQWASP---SHSLSIPILTADTTDPPS 81 (420)
Q Consensus 7 ~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagR--s~~kl~~~~~~l~~---~~~~~~~~i~~D~~d~~s 81 (420)
+..+.+|+|+||+|.||..++-.|++-.--+....+.+.+.+. +.++++...-++.. +....+.+ .. .
T Consensus 120 ~~~p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i-~~--~---- 192 (452)
T cd05295 120 KINPLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISV-TT--D---- 192 (452)
T ss_pred CCCceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEE-EE--C----
Confidence 5567899999999999999999998731101112377888998 67888777666642 11112222 22 1
Q ss_pred HHHHHhccCeeEeccCCCCCCc
Q 014694 82 LHRLCSQTKLLLNCVGPYRLHG 103 (420)
Q Consensus 82 l~~~~~~~dvVIn~aGp~~~~~ 103 (420)
-.+.++++|+||-++|.-...|
T Consensus 193 ~~ea~~daDvvIitag~prk~G 214 (452)
T cd05295 193 LDVAFKDAHVIVLLDDFLIKEG 214 (452)
T ss_pred CHHHhCCCCEEEECCCCCCCcC
Confidence 2567899999999999755444
|
These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=94.28 E-value=0.042 Score=53.68 Aligned_cols=78 Identities=14% Similarity=0.127 Sum_probs=51.7
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC---C--CCCCccE-----EEEeCCCHHH
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP---S--HSLSIPI-----LTADTTDPPS 81 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~---~--~~~~~~~-----i~~D~~d~~s 81 (420)
+|.|+|+ |.+|..++..|++.+ ++|.+.++++++++++.+.+.. . ....+.- +...+.-..+
T Consensus 3 ~V~VIG~-G~mG~~iA~~la~~G-------~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~ 74 (288)
T PRK09260 3 KLVVVGA-GVMGRGIAYVFAVSG-------FQTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSYSLD 74 (288)
T ss_pred EEEEECc-cHHHHHHHHHHHhCC-------CcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCc
Confidence 6899997 999999999999987 7899999999988776543210 0 0000000 0000111134
Q ss_pred HHHHHhccCeeEeccC
Q 014694 82 LHRLCSQTKLLLNCVG 97 (420)
Q Consensus 82 l~~~~~~~dvVIn~aG 97 (420)
+.+.++++|+||-|+.
T Consensus 75 ~~~~~~~aD~Vi~avp 90 (288)
T PRK09260 75 LKAAVADADLVIEAVP 90 (288)
T ss_pred HHHhhcCCCEEEEecc
Confidence 6677889999999885
|
|
| >TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating) | Back alignment and domain information |
|---|
Probab=94.26 E-value=0.28 Score=48.03 Aligned_cols=93 Identities=14% Similarity=0.183 Sum_probs=61.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceE-EEEecChhHHH-HHHHHhCCCCCCCccEEEEeCCCHHHHHHHH--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNPTRVK-QALQWASPSHSLSIPILTADTTDPPSLHRLC-- 86 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v-~iagRs~~kl~-~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~-- 86 (420)
++|-|+|+ |.+|+..+..+.+.. + .++ .++++++++.. +..++++ +.... .+ ++.++
T Consensus 2 lrVAIIG~-G~IG~~h~~~ll~~~--~----~elvaV~d~d~es~~la~A~~~G------i~~~~---~~---~e~ll~~ 62 (285)
T TIGR03215 2 VKVAIIGS-GNIGTDLMYKLLRSE--H----LEMVAMVGIDPESDGLARARELG------VKTSA---EG---VDGLLAN 62 (285)
T ss_pred cEEEEEeC-cHHHHHHHHHHHhCC--C----cEEEEEEeCCcccHHHHHHHHCC------CCEEE---CC---HHHHhcC
Confidence 68999996 999998888877643 1 444 56788876532 3334332 22221 23 33333
Q ss_pred hccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcH
Q 014694 87 SQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEP 124 (420)
Q Consensus 87 ~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~ 124 (420)
.+.|+|+.+.+.... ......|.++|.|.+|.+...
T Consensus 63 ~dIDaV~iaTp~~~H--~e~a~~al~aGk~VIdekPa~ 98 (285)
T TIGR03215 63 PDIDIVFDATSAKAH--ARHARLLAELGKIVIDLTPAA 98 (285)
T ss_pred CCCCEEEECCCcHHH--HHHHHHHHHcCCEEEECCccc
Confidence 368999999876543 677888999999999987544
|
Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc. |
| >COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.26 E-value=0.14 Score=50.16 Aligned_cols=72 Identities=18% Similarity=0.276 Sum_probs=57.7
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
+-+|+|+|+ |++|..-++-...-+ .+|++.++|.++|+++-+... .++.. =..++..+++.++++
T Consensus 168 ~~kv~iiGG-GvvgtnaAkiA~glg-------A~Vtild~n~~rl~~ldd~f~----~rv~~---~~st~~~iee~v~~a 232 (371)
T COG0686 168 PAKVVVLGG-GVVGTNAAKIAIGLG-------ADVTILDLNIDRLRQLDDLFG----GRVHT---LYSTPSNIEEAVKKA 232 (371)
T ss_pred CccEEEECC-ccccchHHHHHhccC-------CeeEEEecCHHHHhhhhHhhC----ceeEE---EEcCHHHHHHHhhhc
Confidence 347999987 999999998877776 799999999999977665543 23333 346789999999999
Q ss_pred CeeEecc
Q 014694 90 KLLLNCV 96 (420)
Q Consensus 90 dvVIn~a 96 (420)
|+||+.+
T Consensus 233 DlvIgaV 239 (371)
T COG0686 233 DLVIGAV 239 (371)
T ss_pred cEEEEEE
Confidence 9999876
|
|
| >COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=94.11 E-value=0.13 Score=52.04 Aligned_cols=85 Identities=14% Similarity=0.231 Sum_probs=56.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCcc-EEEEe-----CCCHHHHHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIP-ILTAD-----TTDPPSLHR 84 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~-~i~~D-----~~d~~sl~~ 84 (420)
|+|.|+| |||+|.-.+--|++.| ++|++.+.+++|.+.+.+.....--+.++ +++-+ +.=..+.++
T Consensus 1 MkI~viG-tGYVGLv~g~~lA~~G-------HeVv~vDid~~KV~~ln~g~~PI~EpgLe~ll~~~~~~gRl~fTtd~~~ 72 (414)
T COG1004 1 MKITVIG-TGYVGLVTGACLAELG-------HEVVCVDIDESKVELLNKGISPIYEPGLEELLKENLASGRLRFTTDYEE 72 (414)
T ss_pred CceEEEC-CchHHHHHHHHHHHcC-------CeEEEEeCCHHHHHHHhCCCCCCcCccHHHHHHhccccCcEEEEcCHHH
Confidence 6899997 6999999999999998 79999999999997665533210000000 00000 111134667
Q ss_pred HHhccCeeEeccC-CCCCCc
Q 014694 85 LCSQTKLLLNCVG-PYRLHG 103 (420)
Q Consensus 85 ~~~~~dvVIn~aG-p~~~~~ 103 (420)
.++.+|+++-|+| |+...|
T Consensus 73 a~~~adv~fIavgTP~~~dg 92 (414)
T COG1004 73 AVKDADVVFIAVGTPPDEDG 92 (414)
T ss_pred HHhcCCEEEEEcCCCCCCCC
Confidence 7889999999998 444333
|
|
| >COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.08 E-value=0.13 Score=51.09 Aligned_cols=99 Identities=20% Similarity=0.233 Sum_probs=59.4
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHH-HHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRV-KQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl-~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
++|-|.||||.+|+.+++.|.++.. ... ...+....|+..+- -++..+ .+. +.-++.|... .+++
T Consensus 2 ~~VavvGATG~VG~~~~~~L~e~~f-~~~-~~~~~AS~rSaG~~~~~f~~~-------~~~-v~~~~~~~~~----~~~~ 67 (334)
T COG0136 2 LNVAVLGATGAVGQVLLELLEERHF-PFE-ELVLLASARSAGKKYIEFGGK-------SIG-VPEDAADEFV----FSDV 67 (334)
T ss_pred cEEEEEeccchHHHHHHHHHHhcCC-Ccc-eEEEEecccccCCccccccCc-------ccc-Cccccccccc----cccC
Confidence 6899999999999999999999542 110 02233333444332 111110 011 1111222222 2279
Q ss_pred CeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHH
Q 014694 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPE 125 (420)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~ 125 (420)
|+|+.|+|- .+...+...+.++|+-.||-++...
T Consensus 68 Divf~~ag~--~~s~~~~p~~~~~G~~VIdnsSa~R 101 (334)
T COG0136 68 DIVFFAAGG--SVSKEVEPKAAEAGCVVIDNSSAFR 101 (334)
T ss_pred CEEEEeCch--HHHHHHHHHHHHcCCEEEeCCcccc
Confidence 999999974 2347888889999998888876543
|
|
| >cd00300 LDH_like L-lactate dehydrogenase-like enzymes | Back alignment and domain information |
|---|
Probab=94.07 E-value=0.68 Score=45.64 Aligned_cols=76 Identities=20% Similarity=0.151 Sum_probs=52.4
Q ss_pred EEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC--CCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--SHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 13 IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~--~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
|.|+|+ |++|..++..|+..+- ..++.+.++++++++....++.. .......+.. ..| .+.++++|
T Consensus 1 i~iiGa-G~VG~~~a~~l~~~~~-----~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~--~~~----~~~l~~aD 68 (300)
T cd00300 1 ITIIGA-GNVGAAVAFALIAKGL-----ASELVLVDVNEEKAKGDALDLSHASAFLATGTIVR--GGD----YADAADAD 68 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhcCC-----CCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEE--CCC----HHHhCCCC
Confidence 568887 8899999998887752 14799999999988877776642 0111112221 122 34788999
Q ss_pred eeEeccCCCC
Q 014694 91 LLLNCVGPYR 100 (420)
Q Consensus 91 vVIn~aGp~~ 100 (420)
+||.++|...
T Consensus 69 iVIitag~p~ 78 (300)
T cd00300 69 IVVITAGAPR 78 (300)
T ss_pred EEEEcCCCCC
Confidence 9999999543
|
Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot |
| >COG0673 MviM Predicted dehydrogenases and related proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.06 E-value=0.36 Score=47.78 Aligned_cols=106 Identities=19% Similarity=0.194 Sum_probs=72.3
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
++++|.|+|+.|+.++..+..+.+.... ..-+.+.+|+.++++++.++.+ +. ....+++++++.
T Consensus 2 ~~irvgiiG~G~~~~~~~~~~~~~~~~~----~~~vav~d~~~~~a~~~a~~~~------~~------~~~~~~~~ll~~ 65 (342)
T COG0673 2 KMIRVGIIGAGGIAGKAHLPALAALGGG----LELVAVVDRDPERAEAFAEEFG------IA------KAYTDLEELLAD 65 (342)
T ss_pred CeeEEEEEcccHHHHHHhHHHHHhCCCc----eEEEEEecCCHHHHHHHHHHcC------CC------cccCCHHHHhcC
Confidence 4679999998777778788887776410 1457888999999999988774 12 122446677764
Q ss_pred --cCeeEeccCCCCCCcHHHHHHHHHcCCc-EEe--cCCcHHHHHHHHH
Q 014694 89 --TKLLLNCVGPYRLHGDPVAAACVHSGCD-YLD--ISGEPEFMERMEA 132 (420)
Q Consensus 89 --~dvVIn~aGp~~~~~~~vv~Ac~~~g~~-yvd--isge~~~~~~~~~ 132 (420)
.|+|+-+.-+... ..++.+|.++|.| +|. ++-...=.++|++
T Consensus 66 ~~iD~V~Iatp~~~H--~e~~~~AL~aGkhVl~EKPla~t~~ea~~l~~ 112 (342)
T COG0673 66 PDIDAVYIATPNALH--AELALAALEAGKHVLCEKPLALTLEEAEELVE 112 (342)
T ss_pred CCCCEEEEcCCChhh--HHHHHHHHhcCCEEEEcCCCCCCHHHHHHHHH
Confidence 6888877755433 5777888899998 444 4545544555555
|
|
| >cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase | Back alignment and domain information |
|---|
Probab=93.95 E-value=0.53 Score=45.23 Aligned_cols=94 Identities=11% Similarity=0.051 Sum_probs=60.0
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHH---HHHHH
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPS---LHRLC 86 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~s---l~~~~ 86 (420)
.-.|+|+|++|.+|+.+++.+...+ .++.+++++.++++.+ ++++ .. ...+..+.+. +.+..
T Consensus 140 ~~~vlv~g~~~~ig~~~~~~~~~~g-------~~v~~~~~~~~~~~~~-~~~g------~~-~~~~~~~~~~~~~~~~~~ 204 (323)
T cd05276 140 GETVLIHGGASGVGTAAIQLAKALG-------ARVIATAGSEEKLEAC-RALG------AD-VAINYRTEDFAEEVKEAT 204 (323)
T ss_pred CCEEEEEcCcChHHHHHHHHHHHcC-------CEEEEEcCCHHHHHHH-HHcC------CC-EEEeCCchhHHHHHHHHh
Confidence 3479999999999999999888887 7888899998887655 4443 12 2234443332 33333
Q ss_pred --hccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecC
Q 014694 87 --SQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 87 --~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdis 121 (420)
.+.|++|+++|... .... -.|...+-+++.++
T Consensus 205 ~~~~~d~vi~~~g~~~--~~~~-~~~~~~~g~~i~~~ 238 (323)
T cd05276 205 GGRGVDVILDMVGGDY--LARN-LRALAPDGRLVLIG 238 (323)
T ss_pred CCCCeEEEEECCchHH--HHHH-HHhhccCCEEEEEe
Confidence 25899999998422 1222 22334444666654
|
PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding |
| >PRK15059 tartronate semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=93.94 E-value=0.42 Score=46.89 Aligned_cols=98 Identities=12% Similarity=0.129 Sum_probs=57.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
|+|-++| .|.+|..+++.|++.+ +++.+.+|++. .+.+. +.+ .. .+ ++..++++++|
T Consensus 1 m~Ig~IG-lG~MG~~ma~~L~~~G-------~~v~v~~~~~~-~~~~~-~~g------~~--~~-----~s~~~~~~~ad 57 (292)
T PRK15059 1 MKLGFIG-LGIMGTPMAINLARAG-------HQLHVTTIGPV-ADELL-SLG------AV--SV-----ETARQVTEASD 57 (292)
T ss_pred CeEEEEc-cCHHHHHHHHHHHHCC-------CeEEEEeCCHh-HHHHH-HcC------Ce--ec-----CCHHHHHhcCC
Confidence 3688887 6999999999999987 78888888864 34432 221 11 11 22345667889
Q ss_pred eeEeccCCCCCCcHHHHH------HHHHcCCcEEecCCcH-HHHHHHHH
Q 014694 91 LLLNCVGPYRLHGDPVAA------ACVHSGCDYLDISGEP-EFMERMEA 132 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~------Ac~~~g~~yvdisge~-~~~~~~~~ 132 (420)
+||-|+..... -+.++. .....|.-+||.|.-. ...+++.+
T Consensus 58 vVi~~v~~~~~-v~~v~~~~~g~~~~~~~g~ivvd~sT~~p~~~~~~~~ 105 (292)
T PRK15059 58 IIFIMVPDTPQ-VEEVLFGENGCTKASLKGKTIVDMSSISPIETKRFAR 105 (292)
T ss_pred EEEEeCCChHH-HHHHHcCCcchhccCCCCCEEEECCCCCHHHHHHHHH
Confidence 99888753210 011110 0012355688887444 44454444
|
|
| >PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=93.94 E-value=0.048 Score=53.30 Aligned_cols=79 Identities=13% Similarity=0.108 Sum_probs=50.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC---CCCCCccEEE--------EeCCCH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP---SHSLSIPILT--------ADTTDP 79 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~---~~~~~~~~i~--------~D~~d~ 79 (420)
.+|.|+|+ |.+|..++..|++.+ ++|.+.+++++++++..+.+.. ....+..+.. ..+.-.
T Consensus 4 ~kIaViGa-G~mG~~iA~~la~~G-------~~V~l~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 75 (287)
T PRK08293 4 KNVTVAGA-GVLGSQIAFQTAFHG-------FDVTIYDISDEALEKAKERIAKLADRYVRDLEATKEAPAEAALNRITLT 75 (287)
T ss_pred cEEEEECC-CHHHHHHHHHHHhcC-------CeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHcCeEEe
Confidence 36999986 999999999999887 7899999999877665543210 0000000000 000011
Q ss_pred HHHHHHHhccCeeEeccC
Q 014694 80 PSLHRLCSQTKLLLNCVG 97 (420)
Q Consensus 80 ~sl~~~~~~~dvVIn~aG 97 (420)
.++++.++++|+||-|+.
T Consensus 76 ~d~~~a~~~aDlVieavp 93 (287)
T PRK08293 76 TDLAEAVKDADLVIEAVP 93 (287)
T ss_pred CCHHHHhcCCCEEEEecc
Confidence 346667889999998874
|
|
| >TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=93.91 E-value=0.46 Score=46.96 Aligned_cols=78 Identities=14% Similarity=0.087 Sum_probs=48.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCC-CCCCc-cEEEEeCCCHHHHHHHHhc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSI-PILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~-~~~~~-~~i~~D~~d~~sl~~~~~~ 88 (420)
++|.|+|+ |++|..++..++..+. .+|.+.+++++..+....++... ..... ..+.. ..| .+. +++
T Consensus 2 ~KV~VIGa-G~vG~~iA~~la~~g~------~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~-t~d---~~~-~~~ 69 (305)
T TIGR01763 2 KKISVIGA-GFVGATTAFRLAEKEL------ADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTG-TNN---YAD-TAN 69 (305)
T ss_pred CEEEEECc-CHHHHHHHHHHHHcCC------CeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEe-cCC---HHH-hCC
Confidence 58999997 9999999999998761 27999999766544222112110 00111 12222 123 233 689
Q ss_pred cCeeEeccCCCC
Q 014694 89 TKLLLNCVGPYR 100 (420)
Q Consensus 89 ~dvVIn~aGp~~ 100 (420)
+|+||-|+|.-.
T Consensus 70 aDiVIitag~p~ 81 (305)
T TIGR01763 70 SDIVVITAGLPR 81 (305)
T ss_pred CCEEEEcCCCCC
Confidence 999999999533
|
The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable. |
| >PRK07502 cyclohexadienyl dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=93.89 E-value=0.28 Score=48.38 Aligned_cols=71 Identities=18% Similarity=0.175 Sum_probs=49.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
.+|.|+| .|.+|..++..|.+.+. ..+|.+.+|++++++...+ .+ +..... .+..+.++++|
T Consensus 7 ~~I~IIG-~G~mG~sla~~l~~~g~-----~~~V~~~dr~~~~~~~a~~-~g------~~~~~~-----~~~~~~~~~aD 68 (307)
T PRK07502 7 DRVALIG-IGLIGSSLARAIRRLGL-----AGEIVGADRSAETRARARE-LG------LGDRVT-----TSAAEAVKGAD 68 (307)
T ss_pred cEEEEEe-eCHHHHHHHHHHHhcCC-----CcEEEEEECCHHHHHHHHh-CC------CCceec-----CCHHHHhcCCC
Confidence 4799998 69999999999998762 1478999999888765432 22 110111 12345678899
Q ss_pred eeEeccCCC
Q 014694 91 LLLNCVGPY 99 (420)
Q Consensus 91 vVIn~aGp~ 99 (420)
+||.|+.+.
T Consensus 69 vViiavp~~ 77 (307)
T PRK07502 69 LVILCVPVG 77 (307)
T ss_pred EEEECCCHH
Confidence 999999763
|
|
| >KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=93.83 E-value=0.09 Score=50.74 Aligned_cols=87 Identities=20% Similarity=0.092 Sum_probs=55.9
Q ss_pred CCCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 014694 6 QIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 6 ~~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~ 85 (420)
..++.++|.|+||.|.||+.+.-.| +..| . .-..++.+-...+ -+..++. +-+-...+....-++.|++.
T Consensus 24 ~~~~~~KVAvlGAaGGIGQPLSLLl-K~np-~---Vs~LaLYDi~~~~--GVaaDlS---HI~T~s~V~g~~g~~~L~~a 93 (345)
T KOG1494|consen 24 GSQRGLKVAVLGAAGGIGQPLSLLL-KLNP-L---VSELALYDIANTP--GVAADLS---HINTNSSVVGFTGADGLENA 93 (345)
T ss_pred cccCcceEEEEecCCccCccHHHHH-hcCc-c---cceeeeeecccCC--ccccccc---ccCCCCceeccCChhHHHHH
Confidence 3567889999999999999986554 4442 1 1234444432211 1222232 22333445566667899999
Q ss_pred HhccCeeEeccCCCCCC
Q 014694 86 CSQTKLLLNCVGPYRLH 102 (420)
Q Consensus 86 ~~~~dvVIn~aGp~~~~ 102 (420)
++++|+||--||--+..
T Consensus 94 l~~advVvIPAGVPRKP 110 (345)
T KOG1494|consen 94 LKGADVVVIPAGVPRKP 110 (345)
T ss_pred hcCCCEEEecCCCCCCC
Confidence 99999999999965543
|
|
| >PRK13303 L-aspartate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.82 E-value=0.36 Score=46.72 Aligned_cols=90 Identities=16% Similarity=0.195 Sum_probs=57.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEE-ecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA-GRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~ia-gRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
++|.|+|. |.+|+.+++.+.+... .++... .+.. +.+...+.+. ..+. . ..|.+++ ..++
T Consensus 2 ~rVgIiG~-G~iG~~~~~~l~~~~~------~~l~~v~~~~~-~~~~~~~~~~----~~~~--~--~~d~~~l---~~~~ 62 (265)
T PRK13303 2 MKVAMIGF-GAIGAAVLELLEHDPD------LRVDWVIVPEH-SIDAVRRALG----EAVR--V--VSSVDAL---PQRP 62 (265)
T ss_pred cEEEEECC-CHHHHHHHHHHhhCCC------ceEEEEEEcCC-CHHHHhhhhc----cCCe--e--eCCHHHh---ccCC
Confidence 58999998 9999999999887631 344332 3332 2222222221 1111 1 2344444 3569
Q ss_pred CeeEeccCCCCCCcHHHHHHHHHcCCcEEecC
Q 014694 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdis 121 (420)
|+||-|+++... ..++..|.++|.|.+..+
T Consensus 63 DvVve~t~~~~~--~e~~~~aL~aGk~Vvi~s 92 (265)
T PRK13303 63 DLVVECAGHAAL--KEHVVPILKAGIDCAVIS 92 (265)
T ss_pred CEEEECCCHHHH--HHHHHHHHHcCCCEEEeC
Confidence 999999987533 678899999999988765
|
|
| >PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=93.78 E-value=0.19 Score=49.24 Aligned_cols=73 Identities=18% Similarity=0.294 Sum_probs=49.5
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
..+++|+|++|.+|+.++..|.+.+ .+|.+..|... ++.+.++++
T Consensus 159 Gk~vvViG~gg~vGkpia~~L~~~g-------atVtv~~~~t~----------------------------~L~~~~~~a 203 (283)
T PRK14192 159 GKHAVVVGRSAILGKPMAMMLLNAN-------ATVTICHSRTQ----------------------------NLPELVKQA 203 (283)
T ss_pred CCEEEEECCcHHHHHHHHHHHHhCC-------CEEEEEeCCch----------------------------hHHHHhccC
Confidence 3479999999999999999998876 67888776322 233444789
Q ss_pred CeeEeccCCCCCCcHHHHHHHHHcCCcEEecC
Q 014694 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdis 121 (420)
|+|||++|--.. +-....+.|+-.+|+.
T Consensus 204 DIvI~AtG~~~~----v~~~~lk~gavViDvg 231 (283)
T PRK14192 204 DIIVGAVGKPEL----IKKDWIKQGAVVVDAG 231 (283)
T ss_pred CEEEEccCCCCc----CCHHHcCCCCEEEEEE
Confidence 999999973221 2223345566566653
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 420 | |||
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 1e-14 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 2e-08 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 4e-07 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 4e-06 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 5e-06 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 4e-05 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 5e-04 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 5e-04 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 6e-04 |
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} Length = 118 | Back alignment and structure |
|---|
Score = 69.4 bits (170), Expect = 1e-14
Identities = 18/121 (14%), Positives = 42/121 (34%), Gaps = 16/121 (13%)
Query: 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPI 71
++ ++GA G G+ + S S+ +A + + + + +
Sbjct: 7 NICVVGA-GKIGQMIAALLKT------SSNYSVTVADHDLAALAVL-------NRMGVAT 52
Query: 72 LTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERME 131
D D L + +++ P+ L +A A +G Y D++ + +
Sbjct: 53 KQVDAKDEAGLAKALGGFDAVISAA-PFFLT-PIIAKAAKAAGAHYFDLTEDVAATNAVR 110
Query: 132 A 132
A
Sbjct: 111 A 111
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} Length = 467 | Back alignment and structure |
|---|
Score = 51.0 bits (121), Expect = 4e-07
Identities = 19/121 (15%), Positives = 47/121 (38%), Gaps = 15/121 (12%)
Query: 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPIL 72
V++LG+ GF + V+ + ++ +A R + + +
Sbjct: 26 VLLLGS-GFVAQPVIDTLAANDDI------NVTVACRTLANAQAL------AKPSGSKAI 72
Query: 73 TADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEA 132
+ D TD +L ++ + ++++ + PY H V + + + D + S + +E
Sbjct: 73 SLDVTDDSALDKVLADNDVVISLI-PYTFH-PNVVKSAIRTKTDVVTSSYISPALRELEP 130
Query: 133 R 133
Sbjct: 131 E 131
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A Length = 450 | Back alignment and structure |
|---|
Score = 47.6 bits (112), Expect = 4e-06
Identities = 18/121 (14%), Positives = 41/121 (33%), Gaps = 15/121 (12%)
Query: 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPIL 72
V++LG+ GF + + + +A R K+ + +
Sbjct: 6 VLMLGS-GFVTRPTLDVLTDSGI-------KVTVACRTLESAKKLS-----AGVQHSTPI 52
Query: 73 TADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEA 132
+ D D +L ++ L+++ + PY H V + + + S M ++
Sbjct: 53 SLDVNDDAALDAEVAKHDLVISLI-PYTFHA-TVIKSAIRQKKHVVTTSYVSPAMMELDQ 110
Query: 133 R 133
Sbjct: 111 A 111
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242 | Back alignment and structure |
|---|
Score = 46.3 bits (110), Expect = 5e-06
Identities = 18/85 (21%), Positives = 31/85 (36%), Gaps = 12/85 (14%)
Query: 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPIL 72
V ILGASG TG+ +++E L+ + L GR L + ++ ++
Sbjct: 21 VFILGASGETGRVLLKEILE-----QGLFSKVTLIGRRK------LTFDEEAYK-NVNQE 68
Query: 73 TADTTDPPSLHRLCSQTKLLLNCVG 97
D + C+G
Sbjct: 69 VVDFEKLDDYASAFQGHDVGFCCLG 93
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221 | Back alignment and structure |
|---|
Score = 43.9 bits (103), Expect = 4e-05
Identities = 12/106 (11%), Positives = 29/106 (27%), Gaps = 10/106 (9%)
Query: 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPIL 72
+ ILGA+G + + L + + L GR + ++
Sbjct: 8 ITILGAAGQIAQXLTATLLTYTDMH------ITLYGRQLKTRIPPEIIDHE----RVTVI 57
Query: 73 TADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYL 118
+P L + + +++ + A +
Sbjct: 58 EGSFQNPGXLEQAVTNAEVVFVGAMESGSDMASIVKALSRXNIRRV 103
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307 | Back alignment and structure |
|---|
Score = 41.0 bits (96), Expect = 5e-04
Identities = 20/112 (17%), Positives = 42/112 (37%), Gaps = 5/112 (4%)
Query: 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPIL 72
++ILG +G G+++V ++K +P +L + + SL + +L
Sbjct: 5 ILILGPTGAIGRHIVWASIKA----GNPTYALVRKTITAANPETKEELIDNYQSLGVILL 60
Query: 73 TADTTDPPSLHRLCSQTKLLLNCVGPYRLHG-DPVAAACVHSGCDYLDISGE 123
D D +L + Q +++ G + + A +G E
Sbjct: 61 EGDINDHETLVKAIKQVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFFPSE 112
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321 | Back alignment and structure |
|---|
Score = 40.7 bits (95), Expect = 5e-04
Identities = 23/136 (16%), Positives = 53/136 (38%), Gaps = 17/136 (12%)
Query: 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPIL 72
+II G +G+ GK++VR +L + P+ P+ V+ ++ S + I+
Sbjct: 7 IIIYGGTGYIGKFMVRASLSF-SHPTFIYARPLTPDSTPSSVQLREEFRSM----GVTII 61
Query: 73 TADTTDPPSLHRLCSQTKLLLNCVGPYRLHG-DPVAAACVHS-----------GCDYLDI 120
+ + + + Q ++++ + + + A + GC+ I
Sbjct: 62 EGEMEEHEKMVSVLKQVDIVISALPFPMISSQIHIINAIKAAGNIKRFLPSDFGCEEDRI 121
Query: 121 SGEPEFMERMEARQWI 136
P F +E ++ I
Sbjct: 122 KPLPPFESVLEKKRII 137
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308 | Back alignment and structure |
|---|
Score = 40.6 bits (95), Expect = 6e-04
Identities = 22/130 (16%), Positives = 50/130 (38%), Gaps = 8/130 (6%)
Query: 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPIL 72
++++GA+G+ G++V + +L L P+ + + A N + + + + I+
Sbjct: 7 ILLIGATGYIGRHVAKASLDL-GHPTFLLVRESTASSNSEKAQLLESFKAS----GANIV 61
Query: 73 TADTTDPPSLHRLCSQTKLLLNCVGPYRLHG-DPVAAACVHSGCDYLDISGEPEFMERME 131
D SL ++++ VG ++ + A G EF ++
Sbjct: 62 HGSIDDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPS--EFGNDVD 119
Query: 132 ARQWIPPAVP 141
+ PA
Sbjct: 120 NVHAVEPAKS 129
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 420 | |||
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 99.71 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 99.45 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.35 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.3 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.29 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.29 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.29 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.27 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.27 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.27 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.25 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 99.24 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.24 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 99.23 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.23 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 99.22 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.22 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 99.22 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.22 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.21 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 99.21 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 99.2 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.2 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.2 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.19 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.18 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.17 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.17 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.16 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 99.15 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 99.15 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.15 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.14 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.14 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.13 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.12 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 99.12 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.11 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 99.11 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 99.11 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 99.11 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 99.1 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 99.09 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.09 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.09 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.07 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 99.07 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 99.06 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.06 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 99.06 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 99.05 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 99.05 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 99.05 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 99.05 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 99.05 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.04 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 99.04 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 99.04 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 99.04 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 99.04 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.04 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 99.03 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.03 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.03 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 99.03 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 99.03 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 99.03 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.03 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 99.03 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 99.03 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 99.02 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.02 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.02 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 99.01 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.01 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.01 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 99.0 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 99.0 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 99.0 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 99.0 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 99.0 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 98.99 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 98.99 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 98.99 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 98.99 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 98.99 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 98.99 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 98.99 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 98.99 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 98.99 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 98.99 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 98.98 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 98.98 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 98.98 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 98.98 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 98.98 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 98.98 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 98.98 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 98.98 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 98.98 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 98.98 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 98.98 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 98.98 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 98.98 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 98.97 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 98.97 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 98.97 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 98.97 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 98.97 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 98.97 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 98.97 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 98.96 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 98.96 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 98.96 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 98.96 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 98.96 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 98.96 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 98.95 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 98.95 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 98.95 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 98.95 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 98.95 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 98.95 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 98.95 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 98.95 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 98.95 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 98.95 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 98.95 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 98.95 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 98.95 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 98.95 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 98.94 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.94 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 98.94 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 98.94 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 98.94 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 98.94 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 98.94 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 98.94 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 98.93 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 98.93 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 98.93 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 98.93 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 98.93 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 98.93 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 98.93 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 98.93 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 98.93 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 98.93 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 98.92 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 98.92 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 98.92 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 98.92 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 98.92 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 98.92 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 98.92 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 98.92 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 98.92 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 98.92 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 98.92 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.91 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 98.91 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 98.91 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 98.91 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 98.91 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 98.91 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 98.91 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 98.9 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 98.9 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 98.9 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 98.9 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 98.9 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 98.9 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 98.9 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 98.9 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 98.89 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 98.89 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 98.89 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 98.89 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 98.89 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 98.89 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 98.89 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 98.88 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 98.88 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 98.88 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 98.88 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 98.88 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 98.88 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 98.88 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 98.88 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 98.87 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 98.87 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 98.87 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 98.87 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 98.87 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 98.87 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 98.86 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 98.86 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 98.86 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 98.86 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 98.86 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 98.85 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 98.85 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 98.85 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 98.85 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 98.84 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.84 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 98.84 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 98.84 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.84 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 98.84 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 98.83 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 98.83 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 98.83 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 98.83 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 98.83 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 98.83 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 98.82 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 98.82 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 98.82 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 98.81 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 98.81 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 98.81 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 98.81 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 98.81 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 98.81 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 98.81 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 98.8 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 98.8 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.8 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 98.8 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 98.8 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 98.79 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 98.79 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 98.79 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 98.79 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 98.78 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 98.78 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 98.78 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 98.78 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 98.78 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 98.78 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 98.78 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 98.77 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 98.77 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 98.77 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 98.77 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 98.76 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 98.76 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 98.76 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 98.75 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 98.75 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 98.74 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 98.73 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 98.73 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 98.72 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 98.72 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 98.72 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 98.72 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 98.72 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 98.72 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 98.72 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 98.71 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 98.7 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 98.69 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 98.68 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 98.68 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 98.68 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 98.67 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 98.67 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 98.67 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 98.66 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 98.66 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 98.66 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 98.66 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 98.65 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 98.65 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 98.64 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 98.64 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 98.64 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 98.63 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 98.63 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 98.62 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 98.61 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 98.6 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 98.58 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 98.58 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 98.57 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 98.56 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 98.55 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 98.53 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 98.53 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 98.5 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 98.49 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 98.49 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 98.44 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 98.43 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 98.42 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 98.42 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 98.41 | |
| 2ph5_A | 480 | Homospermidine synthase; alpha-beta protein, struc | 98.41 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 98.41 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 98.4 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 98.39 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 98.38 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 98.35 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 98.35 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 98.35 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 98.34 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 98.24 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 98.23 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 98.14 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 98.07 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 98.06 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 98.04 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 98.03 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 98.01 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 98.0 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 97.99 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 97.98 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 97.97 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 97.95 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 97.93 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 97.92 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 97.91 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 97.89 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 97.88 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 97.83 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 97.81 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 97.8 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 97.8 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 97.77 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 97.75 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 97.75 | |
| 2nqt_A | 352 | N-acetyl-gamma-glutamyl-phosphate reductase; apopr | 97.69 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 97.68 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 97.67 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 97.67 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 97.67 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 97.67 | |
| 5mdh_A | 333 | Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH | 97.58 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 97.57 | |
| 1xyg_A | 359 | Putative N-acetyl-gamma-glutamyl-phosphate reduct; | 97.5 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 97.47 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 97.47 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 97.47 | |
| 3h8v_A | 292 | Ubiquitin-like modifier-activating enzyme 5; rossm | 97.47 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 97.46 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 97.44 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 97.42 | |
| 2ozp_A | 345 | N-acetyl-gamma-glutamyl-phosphate reductase; amino | 97.4 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 97.38 | |
| 1ys4_A | 354 | Aspartate-semialdehyde dehydrogenase; oxidoreducta | 97.38 | |
| 3pwz_A | 272 | Shikimate dehydrogenase 3; alpha-beta, oxidoreduct | 97.33 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 97.31 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 97.3 | |
| 2ep5_A | 350 | 350AA long hypothetical aspartate-semialdehyde deh | 97.3 | |
| 3dr3_A | 337 | N-acetyl-gamma-glutamyl-phosphate reductase; csgid | 97.29 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 97.28 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 97.27 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 97.24 | |
| 1p77_A | 272 | Shikimate 5-dehydrogenase; NADPH, oxidoreductase; | 97.24 | |
| 1mld_A | 314 | Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D | 97.24 | |
| 2hjs_A | 340 | USG-1 protein homolog; aspartate-semialdehyde dehy | 97.23 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 97.22 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 97.22 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 97.21 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 97.2 | |
| 1zud_1 | 251 | Adenylyltransferase THIF; thiamin, thiazole, prote | 97.2 | |
| 1dih_A | 273 | Dihydrodipicolinate reductase; oxidoreductase; HET | 97.19 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 97.18 | |
| 1gpj_A | 404 | Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro | 97.16 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 97.14 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 97.14 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 97.14 | |
| 3o8q_A | 281 | Shikimate 5-dehydrogenase I alpha; structural geno | 97.14 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 97.11 | |
| 4dpk_A | 359 | Malonyl-COA/succinyl-COA reductase; dinucleotide b | 97.1 | |
| 4dpl_A | 359 | Malonyl-COA/succinyl-COA reductase; dinucleotide b | 97.1 | |
| 3fi9_A | 343 | Malate dehydrogenase; structural genomics, oxidore | 97.09 | |
| 2vns_A | 215 | Metalloreductase steap3; metal-binding, transmembr | 97.07 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 97.07 | |
| 3h5n_A | 353 | MCCB protein; ubiquitin-activating enzyme, microci | 97.04 | |
| 3c24_A | 286 | Putative oxidoreductase; YP_511008.1, structural g | 97.03 | |
| 3rui_A | 340 | Ubiquitin-like modifier-activating enzyme ATG7; au | 97.0 | |
| 3pqe_A | 326 | L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas | 97.0 | |
| 1pzg_A | 331 | LDH, lactate dehydrogenase; apicomplexa, APAD, tet | 97.0 | |
| 1lnq_A | 336 | MTHK channels, potassium channel related protein; | 96.97 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 96.95 | |
| 3vku_A | 326 | L-LDH, L-lactate dehydrogenase; rossmann fold, NAD | 96.94 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 96.91 | |
| 1ez4_A | 318 | Lactate dehydrogenase; rossmann fold, oxidoreducta | 96.89 | |
| 3fbt_A | 282 | Chorismate mutase and shikimate 5-dehydrogenase fu | 96.89 | |
| 3u62_A | 253 | Shikimate dehydrogenase; shikimate pathway, oxidor | 96.87 | |
| 3d1l_A | 266 | Putative NADP oxidoreductase BF3122; structural ge | 96.86 | |
| 3g0o_A | 303 | 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine | 96.86 | |
| 2ahr_A | 259 | Putative pyrroline carboxylate reductase; pyrrolin | 96.85 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 96.84 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 96.8 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 96.77 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 96.76 | |
| 3l6d_A | 306 | Putative oxidoreductase; structural genomics, prot | 96.76 | |
| 2r00_A | 336 | Aspartate-semialdehyde dehydrogenase; conformation | 96.75 | |
| 4dll_A | 320 | 2-hydroxy-3-oxopropionate reductase; structural ge | 96.75 | |
| 1p9l_A | 245 | Dihydrodipicolinate reductase; oxidoreductase, lys | 96.74 | |
| 3ijp_A | 288 | DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, | 96.73 | |
| 3phh_A | 269 | Shikimate dehydrogenase; shikimate pathway, helico | 96.73 | |
| 3q2i_A | 354 | Dehydrogenase; rossmann fold, UDP-sugar binding, N | 96.72 | |
| 1bg6_A | 359 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L | 96.72 | |
| 2zqz_A | 326 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ro | 96.7 | |
| 4gsl_A | 615 | Ubiquitin-like modifier-activating enzyme ATG7; ub | 96.7 | |
| 3pwk_A | 366 | Aspartate-semialdehyde dehydrogenase; NADP binding | 96.69 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 96.69 | |
| 1y6j_A | 318 | L-lactate dehydrogenase; southeast collaboratory f | 96.64 | |
| 1oju_A | 294 | MDH, malate dehydrogenase; hyperthermophilic, oxid | 96.6 | |
| 2hk9_A | 275 | Shikimate dehydrogenase; shikimate pathway, drug d | 96.59 | |
| 3vh1_A | 598 | Ubiquitin-like modifier-activating enzyme ATG7; au | 96.58 | |
| 3uuw_A | 308 | Putative oxidoreductase with NAD(P)-binding rossm | 96.58 | |
| 4f3y_A | 272 | DHPR, dihydrodipicolinate reductase; structural ge | 96.58 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 96.57 | |
| 3tum_A | 269 | Shikimate dehydrogenase family protein; rossmann-f | 96.56 | |
| 3euw_A | 344 | MYO-inositol dehydrogenase; protein structure init | 96.56 | |
| 2v6b_A | 304 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ra | 96.54 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 96.53 | |
| 3doj_A | 310 | AT3G25530, dehydrogenase-like protein; gamma-hydro | 96.53 | |
| 3p2y_A | 381 | Alanine dehydrogenase/pyridine nucleotide transhy; | 96.51 | |
| 3d0o_A | 317 | L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly | 96.51 | |
| 3pef_A | 287 | 6-phosphogluconate dehydrogenase, NAD-binding; gam | 96.51 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 96.49 | |
| 2d5c_A | 263 | AROE, shikimate 5-dehydrogenase; substrate, dimer, | 96.48 | |
| 3cky_A | 301 | 2-hydroxymethyl glutarate dehydrogenase; rossmann | 96.48 | |
| 3qha_A | 296 | Putative oxidoreductase; seattle structural genomi | 96.46 | |
| 1vpd_A | 299 | Tartronate semialdehyde reductase; structural geno | 96.43 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 96.43 | |
| 4aj2_A | 331 | L-lactate dehydrogenase A chain; oxidoreductase-in | 96.43 | |
| 3hsk_A | 381 | Aspartate-semialdehyde dehydrogenase; candida albi | 96.42 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 96.42 | |
| 3db2_A | 354 | Putative NADPH-dependent oxidoreductase; two domai | 96.4 | |
| 4dio_A | 405 | NAD(P) transhydrogenase subunit alpha PART 1; stru | 96.39 | |
| 2ew2_A | 316 | 2-dehydropantoate 2-reductase, putative; alpha-str | 96.39 | |
| 3dtt_A | 245 | NADP oxidoreductase; structural genomics, joint ce | 96.37 | |
| 2xxj_A | 310 | L-LDH, L-lactate dehydrogenase; oxidoreductase, hy | 96.35 | |
| 1tlt_A | 319 | Putative oxidoreductase (virulence factor MVIM HO; | 96.35 | |
| 4e21_A | 358 | 6-phosphogluconate dehydrogenase (decarboxylating; | 96.34 | |
| 2o7s_A | 523 | DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat | 96.34 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 96.34 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 96.33 | |
| 2h78_A | 302 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601 | 96.32 | |
| 3cea_A | 346 | MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore | 96.32 | |
| 1b7g_O | 340 | Protein (glyceraldehyde 3-phosphate dehydrogenase; | 96.3 | |
| 1nvm_B | 312 | Acetaldehyde dehydrogenase (acylating), 4-hydroxy- | 96.3 | |
| 1ldn_A | 316 | L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA | 96.29 | |
| 3oqb_A | 383 | Oxidoreductase; structural genomics, protein struc | 96.28 | |
| 3hhp_A | 312 | Malate dehydrogenase; MDH, citric acid cycle, TCA | 96.26 | |
| 3tz6_A | 344 | Aspartate-semialdehyde dehydrogenase; asadh, ASD, | 96.24 | |
| 1vkn_A | 351 | N-acetyl-gamma-glutamyl-phosphate reductase; TM178 | 96.22 | |
| 2x0j_A | 294 | Malate dehydrogenase; oxidoreductase, hyperthermop | 96.21 | |
| 3p7m_A | 321 | Malate dehydrogenase; putative dehydrogenase, enzy | 96.19 | |
| 4hkt_A | 331 | Inositol 2-dehydrogenase; structural genomics, nys | 96.18 | |
| 2cf5_A | 357 | Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign | 96.18 | |
| 1r0k_A | 388 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; N | 96.16 | |
| 4h7p_A | 345 | Malate dehydrogenase; ssgcid, structural G seattle | 96.16 | |
| 1l7d_A | 384 | Nicotinamide nucleotide transhydrogenase, subunit | 96.16 | |
| 1x13_A | 401 | NAD(P) transhydrogenase subunit alpha; NAD(H)-bind | 96.15 | |
| 3rc1_A | 350 | Sugar 3-ketoreductase; sugar biosynthesis, TDP bin | 96.15 | |
| 1npy_A | 271 | Hypothetical shikimate 5-dehydrogenase-like protei | 96.15 | |
| 3obb_A | 300 | Probable 3-hydroxyisobutyrate dehydrogenase; struc | 96.14 | |
| 3krt_A | 456 | Crotonyl COA reductase; structural genomics, prote | 96.14 | |
| 1edz_A | 320 | 5,10-methylenetetrahydrofolate dehydrogenase; nucl | 96.13 | |
| 1cf2_P | 337 | Protein (glyceraldehyde-3-phosphate dehydrogenase) | 96.12 | |
| 3uw3_A | 377 | Aspartate-semialdehyde dehydrogenase; structural g | 96.07 | |
| 3ldh_A | 330 | Lactate dehydrogenase; oxidoreductase, CHOH donor, | 96.07 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 96.06 | |
| 3gvi_A | 324 | Malate dehydrogenase; NAD, oxidoreductase, tricarb | 96.06 | |
| 3nep_X | 314 | Malate dehydrogenase; halophIle, molecular adpatat | 96.05 | |
| 3e9m_A | 330 | Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, | 96.05 | |
| 2i99_A | 312 | MU-crystallin homolog; thyroid hormine binding pro | 96.04 | |
| 3gt0_A | 247 | Pyrroline-5-carboxylate reductase; structural geno | 96.04 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 96.03 | |
| 3tri_A | 280 | Pyrroline-5-carboxylate reductase; amino acid bios | 96.03 | |
| 1t2d_A | 322 | LDH-P, L-lactate dehydrogenase; ternary complex, o | 96.02 | |
| 1uuf_A | 369 | YAHK, zinc-type alcohol dehydrogenase-like protein | 96.02 | |
| 1t4b_A | 367 | Aspartate-semialdehyde dehydrogenase; asadh, HOSR, | 96.01 | |
| 3pdu_A | 287 | 3-hydroxyisobutyrate dehydrogenase family protein; | 95.99 | |
| 1a5z_A | 319 | L-lactate dehydrogenase; oxidoreductase, glycolysi | 95.97 | |
| 4e12_A | 283 | Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 | 95.93 | |
| 1ur5_A | 309 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 95.93 | |
| 1ydw_A | 362 | AX110P-like protein; structural genomics, protein | 95.92 | |
| 4huj_A | 220 | Uncharacterized protein; PSI-biology, nysgrc, stru | 95.92 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 95.91 | |
| 3pzr_A | 370 | Aspartate-semialdehyde dehydrogenase; NADP, oxidor | 95.89 | |
| 2yv3_A | 331 | Aspartate-semialdehyde dehydrogenase; aspartate pa | 95.89 | |
| 3qsg_A | 312 | NAD-binding phosphogluconate dehydrogenase-like P; | 95.88 | |
| 3gaz_A | 343 | Alcohol dehydrogenase superfamily protein; oxidore | 95.88 | |
| 1y8q_A | 346 | Ubiquitin-like 1 activating enzyme E1A; SUMO, hete | 95.87 | |
| 2uyy_A | 316 | N-PAC protein; long-chain dehydrogenase, cytokine; | 95.87 | |
| 2vn8_A | 375 | Reticulon-4-interacting protein 1; mitochondrion, | 95.85 | |
| 3bio_A | 304 | Oxidoreductase, GFO/IDH/MOCA family; structural ge | 95.84 | |
| 1nvt_A | 287 | Shikimate 5'-dehydrogenase; structural genomics, P | 95.82 | |
| 1h2b_A | 359 | Alcohol dehydrogenase; oxidoreductase, archaea, hy | 95.81 |
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.1e-16 Score=160.21 Aligned_cols=107 Identities=19% Similarity=0.219 Sum_probs=91.6
Q ss_pred CCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 014694 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 7 ~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
..|+|+|+|+|| |++|+.++++|.++ .+|.+++|+.++++++. ..+..+.+|++|.+++.+++
T Consensus 13 ~g~~mkilvlGa-G~vG~~~~~~L~~~--------~~v~~~~~~~~~~~~~~--------~~~~~~~~d~~d~~~l~~~~ 75 (365)
T 3abi_A 13 EGRHMKVLILGA-GNIGRAIAWDLKDE--------FDVYIGDVNNENLEKVK--------EFATPLKVDASNFDKLVEVM 75 (365)
T ss_dssp ---CCEEEEECC-SHHHHHHHHHHTTT--------SEEEEEESCHHHHHHHT--------TTSEEEECCTTCHHHHHHHH
T ss_pred cCCccEEEEECC-CHHHHHHHHHHhcC--------CCeEEEEcCHHHHHHHh--------ccCCcEEEecCCHHHHHHHH
Confidence 458899999999 99999999999654 57899999999886653 24567889999999999999
Q ss_pred hccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHHHHHHHH
Q 014694 87 SQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEA 132 (420)
Q Consensus 87 ~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~~~~~~~ 132 (420)
+++|+||||++|+ ++.+++++|+++|+||+|+|.+.++++.+.+
T Consensus 76 ~~~DvVi~~~p~~--~~~~v~~~~~~~g~~yvD~s~~~~~~~~l~~ 119 (365)
T 3abi_A 76 KEFELVIGALPGF--LGFKSIKAAIKSKVDMVDVSFMPENPLELRD 119 (365)
T ss_dssp TTCSEEEECCCGG--GHHHHHHHHHHHTCEEEECCCCSSCGGGGHH
T ss_pred hCCCEEEEecCCc--ccchHHHHHHhcCcceEeeeccchhhhhhhh
Confidence 9999999999987 4689999999999999999999988877655
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=99.45 E-value=1.3e-12 Score=107.91 Aligned_cols=107 Identities=15% Similarity=0.245 Sum_probs=93.1
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
.++|+|+|+ |++|+.+++.|.+.+. ++|.+.+|++++++.+.+ .++.++.+|+.|.+++.++++++
T Consensus 5 ~~~v~I~G~-G~iG~~~~~~l~~~g~------~~v~~~~r~~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~ 70 (118)
T 3ic5_A 5 RWNICVVGA-GKIGQMIAALLKTSSN------YSVTVADHDLAALAVLNR-------MGVATKQVDAKDEAGLAKALGGF 70 (118)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHCSS------EEEEEEESCHHHHHHHHT-------TTCEEEECCTTCHHHHHHHTTTC
T ss_pred cCeEEEECC-CHHHHHHHHHHHhCCC------ceEEEEeCCHHHHHHHHh-------CCCcEEEecCCCHHHHHHHHcCC
Confidence 358999999 9999999999999872 789999999998876541 34678899999999999999999
Q ss_pred CeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHHHHHHHH
Q 014694 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEA 132 (420)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~~~~~~~ 132 (420)
|+||||+++.. ..+++++|.+.|++++|++++..+.+.+.+
T Consensus 71 d~vi~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 111 (118)
T 3ic5_A 71 DAVISAAPFFL--TPIIAKAAKAAGAHYFDLTEDVAATNAVRA 111 (118)
T ss_dssp SEEEECSCGGG--HHHHHHHHHHTTCEEECCCSCHHHHHHHHH
T ss_pred CEEEECCCchh--hHHHHHHHHHhCCCEEEecCcHHHHHHHHH
Confidence 99999997543 489999999999999999999999888764
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.35 E-value=1.6e-12 Score=119.99 Aligned_cols=97 Identities=20% Similarity=0.364 Sum_probs=80.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
++|+|+|||||+|++++++|++++ ++|.+.+|+.++++.+ ..++.++.+|++|++++.++++++|
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~--------~~~~~~~~~Dl~d~~~~~~~~~~~d 69 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRG-------FEVTAVVRHPEKIKIE--------NEHLKVKKADVSSLDEVCEVCKGAD 69 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTT-------CEEEEECSCGGGCCCC--------CTTEEEECCCTTCHHHHHHHHTTCS
T ss_pred CEEEEEcCCchHHHHHHHHHHHCC-------CEEEEEEcCcccchhc--------cCceEEEEecCCCHHHHHHHhcCCC
Confidence 689999999999999999999987 7999999998775321 2468899999999999999999999
Q ss_pred eeEeccCCCCCC----------cHHHHHHHHHcCC-cEEecCC
Q 014694 91 LLLNCVGPYRLH----------GDPVAAACVHSGC-DYLDISG 122 (420)
Q Consensus 91 vVIn~aGp~~~~----------~~~vv~Ac~~~g~-~yvdisg 122 (420)
+|||++|+.... ..+++++|.+.++ ++|.+|.
T Consensus 70 ~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss 112 (227)
T 3dhn_A 70 AVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGG 112 (227)
T ss_dssp EEEECCCC------CCSHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred EEEEeCcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 999999986321 2778899999887 6777764
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=1e-11 Score=122.36 Aligned_cols=101 Identities=17% Similarity=0.225 Sum_probs=81.7
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh----hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP----TRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~----~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~ 85 (420)
+++|+|+|||||+|++++++|++.+ ++|.+.+|+. ++++.+ +.+. ..++.++.+|++|.+++.++
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g-------~~V~~l~R~~~~~~~~~~~~-~~l~---~~~v~~~~~Dl~d~~~l~~~ 78 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAH-------RPTYILARPGPRSPSKAKIF-KALE---DKGAIIVYGLINEQEAMEKI 78 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTT-------CCEEEEECSSCCCHHHHHHH-HHHH---HTTCEEEECCTTCHHHHHHH
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCC-------CCEEEEECCCCCChhHHHHH-HHHH---hCCcEEEEeecCCHHHHHHH
Confidence 4689999999999999999999987 7899999976 455432 2231 24689999999999999999
Q ss_pred Hh--ccCeeEeccCCCCCC-cHHHHHHHHHcC-CcEEecC
Q 014694 86 CS--QTKLLLNCVGPYRLH-GDPVAAACVHSG-CDYLDIS 121 (420)
Q Consensus 86 ~~--~~dvVIn~aGp~~~~-~~~vv~Ac~~~g-~~yvdis 121 (420)
++ ++|+|||++|..... ..+++++|.++| +..+..|
T Consensus 79 ~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~S 118 (346)
T 3i6i_A 79 LKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLPS 118 (346)
T ss_dssp HHHTTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEECS
T ss_pred HhhCCCCEEEECCchhhHHHHHHHHHHHHHcCCceEEeec
Confidence 99 999999999975433 489999999999 7544433
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.29 E-value=8.4e-12 Score=114.79 Aligned_cols=96 Identities=15% Similarity=0.201 Sum_probs=82.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCC-HHHHHHHHhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTD-PPSLHRLCSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d-~~sl~~~~~~~ 89 (420)
|+|+|+|||||+|++++++|++++ ++|.+++|+.++++. ..++.++.+|++| ++++.++++++
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g-------~~V~~~~R~~~~~~~---------~~~~~~~~~D~~d~~~~~~~~~~~~ 64 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTD-------YQIYAGARKVEQVPQ---------YNNVKAVHFDVDWTPEEMAKQLHGM 64 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSS-------CEEEEEESSGGGSCC---------CTTEEEEECCTTSCHHHHHTTTTTC
T ss_pred CeEEEECCCCHHHHHHHHHHHHCC-------CEEEEEECCccchhh---------cCCceEEEecccCCHHHHHHHHcCC
Confidence 579999999999999999999987 899999999877532 1468899999999 99999999999
Q ss_pred CeeEeccCCCCCC--------cHHHHHHHHHcCC-cEEecCC
Q 014694 90 KLLLNCVGPYRLH--------GDPVAAACVHSGC-DYLDISG 122 (420)
Q Consensus 90 dvVIn~aGp~~~~--------~~~vv~Ac~~~g~-~yvdisg 122 (420)
|+||||+|..... ..+++++|.++++ ++|.+|.
T Consensus 65 d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 106 (219)
T 3dqp_A 65 DAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLST 106 (219)
T ss_dssp SEEEECCCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CEEEECCcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECc
Confidence 9999999975421 2788999999887 6777775
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.29 E-value=9e-12 Score=114.76 Aligned_cols=98 Identities=14% Similarity=0.196 Sum_probs=80.4
Q ss_pred eEEEEcCCcHHHHHHHHHHH-HhCCCCCCCcceEEEEecChh-HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 12 DVIILGASGFTGKYVVREAL-KLFNFPSSPIKSLALAGRNPT-RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~-~~~~~~~~~~~~v~iagRs~~-kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
+|+|+||||++|+.++++|+ +.+ ++|++.+|+.+ +++++.+. ..++.++.+|++|++++.++++++
T Consensus 7 ~vlVtGasg~iG~~~~~~l~~~~g-------~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~d~~~~~~~~~~~ 74 (221)
T 3r6d_A 7 YITILGAAGQIAQXLTATLLTYTD-------MHITLYGRQLKTRIPPEIID-----HERVTVIEGSFQNPGXLEQAVTNA 74 (221)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCC-------CEEEEEESSHHHHSCHHHHT-----STTEEEEECCTTCHHHHHHHHTTC
T ss_pred EEEEEeCCcHHHHHHHHHHHhcCC-------ceEEEEecCccccchhhccC-----CCceEEEECCCCCHHHHHHHHcCC
Confidence 49999999999999999999 676 89999999998 77665421 346889999999999999999999
Q ss_pred CeeEeccCCCCCCcHHHHHHHHHcCC-cEEecC
Q 014694 90 KLLLNCVGPYRLHGDPVAAACVHSGC-DYLDIS 121 (420)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~Ac~~~g~-~yvdis 121 (420)
|+|||++|.......+++++|.+.+. ++|.+|
T Consensus 75 d~vv~~ag~~n~~~~~~~~~~~~~~~~~iv~iS 107 (221)
T 3r6d_A 75 EVVFVGAMESGSDMASIVKALSRXNIRRVIGVS 107 (221)
T ss_dssp SEEEESCCCCHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CEEEEcCCCCChhHHHHHHHHHhcCCCeEEEEe
Confidence 99999999742225677777877776 566665
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.29 E-value=7.6e-12 Score=114.99 Aligned_cols=96 Identities=16% Similarity=0.172 Sum_probs=79.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
|+|+|+|||||+|++++++|++++ ++|.+++|+.++++.+. ..++.++.+|++|+++ +.+.++|
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g-------~~V~~~~R~~~~~~~~~-------~~~~~~~~~D~~d~~~--~~~~~~d 64 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRG-------HEVLAVVRDPQKAADRL-------GATVATLVKEPLVLTE--ADLDSVD 64 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHT-------CTTSEEEECCGGGCCH--HHHTTCS
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCC-------CEEEEEEeccccccccc-------CCCceEEecccccccH--hhcccCC
Confidence 579999999999999999999997 89999999998875442 2468899999999888 7889999
Q ss_pred eeEeccCCCCC---------CcHHHHHHHHHcCCcEEecCC
Q 014694 91 LLLNCVGPYRL---------HGDPVAAACVHSGCDYLDISG 122 (420)
Q Consensus 91 vVIn~aGp~~~---------~~~~vv~Ac~~~g~~yvdisg 122 (420)
+||||+|+... ...+++++|.++|.++|.+|+
T Consensus 65 ~vi~~ag~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS 105 (224)
T 3h2s_A 65 AVVDALSVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFILG 105 (224)
T ss_dssp EEEECCCCCTTSSCTHHHHHHHHHHHHTCTTCCCEEEEECC
T ss_pred EEEECCccCCCcchhhHHHHHHHHHHHHHHHcCCcEEEEec
Confidence 99999998521 126778888888877777764
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.27 E-value=5.2e-12 Score=120.94 Aligned_cols=98 Identities=14% Similarity=0.182 Sum_probs=81.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHh-CCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKL-FNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~-~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
|+|+|+|||||+|++++++|++. + .+|.++.|+.++++.+. ..+++++.+|++|++++.++++++
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g-------~~V~~~~R~~~~~~~~~-------~~~v~~~~~D~~d~~~l~~~~~~~ 66 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHI-------DHFHIGVRNVEKVPDDW-------RGKVSVRQLDYFNQESMVEAFKGM 66 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTC-------TTEEEEESSGGGSCGGG-------BTTBEEEECCTTCHHHHHHHTTTC
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCC-------CcEEEEECCHHHHHHhh-------hCCCEEEEcCCCCHHHHHHHHhCC
Confidence 57999999999999999999887 5 78999999988754321 246889999999999999999999
Q ss_pred CeeEeccCCCCCC------cHHHHHHHHHcCC-cEEecCC
Q 014694 90 KLLLNCVGPYRLH------GDPVAAACVHSGC-DYLDISG 122 (420)
Q Consensus 90 dvVIn~aGp~~~~------~~~vv~Ac~~~g~-~yvdisg 122 (420)
|+|||++|+.... ..+++++|.++|+ ++|.+|.
T Consensus 67 d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss 106 (289)
T 3e48_A 67 DTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGY 106 (289)
T ss_dssp SEEEECCCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CEEEEeCCCCccchhhHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 9999999975432 2688999999997 5666653
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=2.8e-11 Score=119.65 Aligned_cols=106 Identities=16% Similarity=0.252 Sum_probs=89.0
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHh-CCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh
Q 014694 9 ELFDVIILGASGFTGKYVVREALKL-FNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~-~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
+.++|+|+||||++|++++++|++. +. .+|++.+|++.+++.+.+.+. ..++.++.+|++|.+++.++++
T Consensus 20 ~~k~vlVTGatG~iG~~l~~~L~~~~g~------~~V~~~~r~~~~~~~~~~~~~---~~~v~~~~~Dl~d~~~l~~~~~ 90 (344)
T 2gn4_A 20 DNQTILITGGTGSFGKCFVRKVLDTTNA------KKIIVYSRDELKQSEMAMEFN---DPRMRFFIGDVRDLERLNYALE 90 (344)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHCCC------SEEEEEESCHHHHHHHHHHHC---CTTEEEEECCTTCHHHHHHHTT
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhhCCC------CEEEEEECChhhHHHHHHHhc---CCCEEEEECCCCCHHHHHHHHh
Confidence 4468999999999999999999998 71 389999999999888777764 3568899999999999999999
Q ss_pred ccCeeEeccCCCCCC----------------cHHHHHHHHHcCC-cEEecCCc
Q 014694 88 QTKLLLNCVGPYRLH----------------GDPVAAACVHSGC-DYLDISGE 123 (420)
Q Consensus 88 ~~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~-~yvdisge 123 (420)
++|+|||+||..... ..+++++|.++++ ++|.+|..
T Consensus 91 ~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~ 143 (344)
T 2gn4_A 91 GVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTD 143 (344)
T ss_dssp TCSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCG
T ss_pred cCCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCC
Confidence 999999999965310 1678999999987 67877754
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.27 E-value=1.3e-11 Score=112.96 Aligned_cols=97 Identities=21% Similarity=0.216 Sum_probs=80.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
|+|+|+|||||+|++++++|++++ ++|.+.+|+.++++.+. .++.++.+|++|+++ +.+.++|
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g-------~~V~~~~R~~~~~~~~~--------~~~~~~~~D~~d~~~--~~~~~~d 63 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRG-------HEVTAIVRNAGKITQTH--------KDINILQKDIFDLTL--SDLSDQN 63 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCSHHHHHHC--------SSSEEEECCGGGCCH--HHHTTCS
T ss_pred CeEEEEcCCchhHHHHHHHHHhCC-------CEEEEEEcCchhhhhcc--------CCCeEEeccccChhh--hhhcCCC
Confidence 579999999999999999999998 89999999998875442 367899999999887 7889999
Q ss_pred eeEeccCCCCCC-------cHHHHHHHHHcCC-cEEecCCcH
Q 014694 91 LLLNCVGPYRLH-------GDPVAAACVHSGC-DYLDISGEP 124 (420)
Q Consensus 91 vVIn~aGp~~~~-------~~~vv~Ac~~~g~-~yvdisge~ 124 (420)
+||||+|+.... ..+++++|.+++. ++|.+|...
T Consensus 64 ~vi~~ag~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~ 105 (221)
T 3ew7_A 64 VVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGAA 105 (221)
T ss_dssp EEEECCCSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECCCC
T ss_pred EEEECCcCCccccchHHHHHHHHHHHHHhcCCceEEEEecce
Confidence 999999985322 2788899988865 677776543
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=1.8e-11 Score=110.63 Aligned_cols=99 Identities=14% Similarity=0.216 Sum_probs=81.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
++|+|+||||++|++++++|++++ ++|.+.+|+.++++. + ...++.++.+|++|++++.++++++|
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g-------~~V~~~~r~~~~~~~----~---~~~~~~~~~~D~~~~~~~~~~~~~~d 69 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAG-------YEVTVLVRDSSRLPS----E---GPRPAHVVVGDVLQAADVDKTVAGQD 69 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-------CEEEEEESCGGGSCS----S---SCCCSEEEESCTTSHHHHHHHHTTCS
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCC-------CeEEEEEeChhhccc----c---cCCceEEEEecCCCHHHHHHHHcCCC
Confidence 689999999999999999999987 799999999877521 1 13468899999999999999999999
Q ss_pred eeEeccCCCCC---------CcHHHHHHHHHcCC-cEEecCCc
Q 014694 91 LLLNCVGPYRL---------HGDPVAAACVHSGC-DYLDISGE 123 (420)
Q Consensus 91 vVIn~aGp~~~---------~~~~vv~Ac~~~g~-~yvdisge 123 (420)
+|||++|+... ...+++++|.+.++ ++|.+|..
T Consensus 70 ~vi~~a~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~ 112 (206)
T 1hdo_A 70 AVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSA 112 (206)
T ss_dssp EEEECCCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCG
T ss_pred EEEECccCCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEeee
Confidence 99999997542 13677888888887 57777654
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.24 E-value=1.5e-11 Score=120.19 Aligned_cols=102 Identities=21% Similarity=0.265 Sum_probs=79.9
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
..|+|+|+|||||+|++++++|++++ ++|.+.+|+.++.+.+. ..++.++.+|++|++++.+++++
T Consensus 12 ~~M~ilVtGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~l~-------~~~~~~~~~Dl~d~~~~~~~~~~ 77 (342)
T 2x4g_A 12 AHVKYAVLGATGLLGHHAARAIRAAG-------HDLVLIHRPSSQIQRLA-------YLEPECRVAEMLDHAGLERALRG 77 (342)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTT-------CEEEEEECTTSCGGGGG-------GGCCEEEECCTTCHHHHHHHTTT
T ss_pred cCCEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEecChHhhhhhc-------cCCeEEEEecCCCHHHHHHHHcC
Confidence 34689999999999999999999987 79999999877653321 12578899999999999999999
Q ss_pred cCeeEeccCCCCCC--------------cHHHHHHHHHcCC-cEEecCCcH
Q 014694 89 TKLLLNCVGPYRLH--------------GDPVAAACVHSGC-DYLDISGEP 124 (420)
Q Consensus 89 ~dvVIn~aGp~~~~--------------~~~vv~Ac~~~g~-~yvdisge~ 124 (420)
+|+|||++|..... ..+++++|.++++ ++|.+|...
T Consensus 78 ~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~ 128 (342)
T 2x4g_A 78 LDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAY 128 (342)
T ss_dssp CSEEEEC------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGG
T ss_pred CCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHH
Confidence 99999999965321 1688999999986 788887643
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.24 E-value=2.5e-11 Score=112.89 Aligned_cols=98 Identities=13% Similarity=0.162 Sum_probs=81.4
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCc-cEEEEeCCCHHHHHHHHh
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSI-PILTADTTDPPSLHRLCS 87 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~-~~i~~D~~d~~sl~~~~~ 87 (420)
+.++|+|+||||++|++++++|++++ ++|++.+|+.++++++.+ .++ .++.+|++ +++.+.+.
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G-------~~V~~~~R~~~~~~~~~~-------~~~~~~~~~Dl~--~~~~~~~~ 83 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKG-------HEPVAMVRNEEQGPELRE-------RGASDIVVANLE--EDFSHAFA 83 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESSGGGHHHHHH-------TTCSEEEECCTT--SCCGGGGT
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCC-------CeEEEEECChHHHHHHHh-------CCCceEEEcccH--HHHHHHHc
Confidence 45689999999999999999999987 899999999998876543 257 88999998 77888899
Q ss_pred ccCeeEeccCCCCCC------------cHHHHHHHHHcCC-cEEecCC
Q 014694 88 QTKLLLNCVGPYRLH------------GDPVAAACVHSGC-DYLDISG 122 (420)
Q Consensus 88 ~~dvVIn~aGp~~~~------------~~~vv~Ac~~~g~-~yvdisg 122 (420)
++|+|||++|+.... ..+++++|.+.+. ++|.+|.
T Consensus 84 ~~D~vi~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 131 (236)
T 3e8x_A 84 SIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSS 131 (236)
T ss_dssp TCSEEEECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECC
T ss_pred CCCEEEECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEec
Confidence 999999999976421 2678888888886 6777765
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.23 E-value=1.3e-11 Score=122.35 Aligned_cols=101 Identities=17% Similarity=0.185 Sum_probs=84.7
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHh-CCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCC-CHHHHHHHHh
Q 014694 10 LFDVIILGASGFTGKYVVREALKL-FNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTT-DPPSLHRLCS 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~-~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~-d~~sl~~~~~ 87 (420)
.++|+|+|||||+|++++++|+++ + ++|.+++|+.++++.+.+ ..++.++.+|++ |.+++.++++
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~~g-------~~V~~~~r~~~~~~~~~~------~~~v~~~~~Dl~~d~~~~~~~~~ 90 (372)
T 3slg_A 24 AKKVLILGVNGFIGHHLSKRILETTD-------WEVFGMDMQTDRLGDLVK------HERMHFFEGDITINKEWVEYHVK 90 (372)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHSS-------CEEEEEESCCTTTGGGGG------STTEEEEECCTTTCHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCC-------CEEEEEeCChhhhhhhcc------CCCeEEEeCccCCCHHHHHHHhc
Confidence 468999999999999999999998 5 799999999877644322 247889999999 9999999999
Q ss_pred ccCeeEeccCCCCC----------------CcHHHHHHHHHcCCcEEecCCc
Q 014694 88 QTKLLLNCVGPYRL----------------HGDPVAAACVHSGCDYLDISGE 123 (420)
Q Consensus 88 ~~dvVIn~aGp~~~----------------~~~~vv~Ac~~~g~~yvdisge 123 (420)
++|+||||||.... ...+++++|.+.+.++|.+|..
T Consensus 91 ~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~v~~SS~ 142 (372)
T 3slg_A 91 KCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTS 142 (372)
T ss_dssp HCSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHTCEEEEECCG
T ss_pred cCCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEeCcH
Confidence 99999999996542 1267899999998788888864
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.23 E-value=4.9e-11 Score=115.20 Aligned_cols=97 Identities=20% Similarity=0.281 Sum_probs=79.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC-----hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-----PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs-----~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~ 85 (420)
++|+|+||||++|++++++|++++ ++|.+.+|+ +++.+.+ +.+. ..++.++.+|++|++++.++
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g-------~~V~~~~R~~~~~~~~~~~~~-~~~~---~~~~~~~~~D~~d~~~l~~~ 73 (313)
T 1qyd_A 5 SRVLIVGGTGYIGKRIVNASISLG-------HPTYVLFRPEVVSNIDKVQML-LYFK---QLGAKLIEASLDDHQRLVDA 73 (313)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTT-------CCEEEECCSCCSSCHHHHHHH-HHHH---TTTCEEECCCSSCHHHHHHH
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCC-------CcEEEEECCCcccchhHHHHH-HHHH---hCCeEEEeCCCCCHHHHHHH
Confidence 579999999999999999999987 789999998 3454333 2231 24678999999999999999
Q ss_pred HhccCeeEeccCCCC-----CCcHHHHHHHHHcC-Cc-EE
Q 014694 86 CSQTKLLLNCVGPYR-----LHGDPVAAACVHSG-CD-YL 118 (420)
Q Consensus 86 ~~~~dvVIn~aGp~~-----~~~~~vv~Ac~~~g-~~-yv 118 (420)
++++|+|||++|+.. ....+++++|.++| +. +|
T Consensus 74 ~~~~d~vi~~a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v 113 (313)
T 1qyd_A 74 LKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFL 113 (313)
T ss_dssp HTTCSEEEECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEE
T ss_pred HhCCCEEEECCccccchhhHHHHHHHHHHHHhcCCCceEE
Confidence 999999999999752 22488999999998 74 44
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=99.22 E-value=3.8e-11 Score=121.58 Aligned_cols=106 Identities=25% Similarity=0.343 Sum_probs=88.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~-- 88 (420)
++|+|+|| |++|+.+++.|++++.. ..+|++++|+.++++++.+++......++..+.+|++|.+++++++++
T Consensus 2 ~kVlIiGa-GgiG~~ia~~L~~~g~~----~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~ 76 (405)
T 4ina_A 2 AKVLQIGA-GGVGGVVAHKMAMNREV----FSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVK 76 (405)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTCTTT----CCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCC----ceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhC
Confidence 37999999 99999999999987620 028999999999999888876410113578899999999999999998
Q ss_pred cCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCc
Q 014694 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGE 123 (420)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge 123 (420)
+|+||||+||+. ..+++++|.++|+||+|+++.
T Consensus 77 ~DvVin~ag~~~--~~~v~~a~l~~g~~vvD~a~~ 109 (405)
T 4ina_A 77 PQIVLNIALPYQ--DLTIMEACLRTGVPYLDTANY 109 (405)
T ss_dssp CSEEEECSCGGG--HHHHHHHHHHHTCCEEESSCC
T ss_pred CCEEEECCCccc--ChHHHHHHHHhCCCEEEecCC
Confidence 899999999875 478999999999999998764
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.22 E-value=1.1e-11 Score=118.26 Aligned_cols=98 Identities=21% Similarity=0.262 Sum_probs=81.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHh--CCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 11 FDVIILGASGFTGKYVVREALKL--FNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~--~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
++|+|+|||||+|++++++|+++ + ++|.+.+|+.++.+.+.. .++.++.+|++|++++.+++++
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g-------~~V~~~~r~~~~~~~l~~-------~~~~~~~~D~~d~~~l~~~~~~ 66 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPA-------SQIIAIVRNVEKASTLAD-------QGVEVRHGDYNQPESLQKAFAG 66 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCG-------GGEEEEESCTTTTHHHHH-------TTCEEEECCTTCHHHHHHHTTT
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCC-------CeEEEEEcCHHHHhHHhh-------cCCeEEEeccCCHHHHHHHHhc
Confidence 36999999999999999999987 5 799999999887655432 2578899999999999999999
Q ss_pred cCeeEeccCCCCC------CcHHHHHHHHHcCC-cEEecCC
Q 014694 89 TKLLLNCVGPYRL------HGDPVAAACVHSGC-DYLDISG 122 (420)
Q Consensus 89 ~dvVIn~aGp~~~------~~~~vv~Ac~~~g~-~yvdisg 122 (420)
+|+|||++|+... ...+++++|.++++ ++|.+|.
T Consensus 67 ~d~vi~~a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss 107 (287)
T 2jl1_A 67 VSKLLFISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGY 107 (287)
T ss_dssp CSEEEECCCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCEEEEcCCCCcCchHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 9999999997421 12678999999998 6777664
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=1.9e-11 Score=120.16 Aligned_cols=109 Identities=13% Similarity=0.076 Sum_probs=83.2
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCC----CCCccEEEEeCCCHHHHHH
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSH----SLSIPILTADTTDPPSLHR 84 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~----~~~~~~i~~D~~d~~sl~~ 84 (420)
..++|+|+|||||+|++++++|++++ ++|++++|+..+.....+.+.... ..++.++.+|+.|++++.+
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~ 96 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLN-------QVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQ 96 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHH
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHH
Confidence 34689999999999999999999987 799999996543222222221000 0468899999999999999
Q ss_pred HHhccCeeEeccCCCCCC----------------cHHHHHHHHHcCC-cEEecCCcH
Q 014694 85 LCSQTKLLLNCVGPYRLH----------------GDPVAAACVHSGC-DYLDISGEP 124 (420)
Q Consensus 85 ~~~~~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~-~yvdisge~ 124 (420)
+++++|+||||||..... ..+++++|.+.++ ++|.+|...
T Consensus 97 ~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~ 153 (351)
T 3ruf_A 97 VMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSS 153 (351)
T ss_dssp HTTTCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGG
T ss_pred HhcCCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHH
Confidence 999999999999964311 1568999999997 688777543
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.22 E-value=5.9e-11 Score=114.33 Aligned_cols=97 Identities=18% Similarity=0.294 Sum_probs=78.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh------hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP------TRVKQALQWASPSHSLSIPILTADTTDPPSLHR 84 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~------~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~ 84 (420)
++|+|+||||++|++++++|++++ ++|.+.+|+. ++.+.+ +.+. ..+++++.+|++|++++.+
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g-------~~V~~l~R~~~~~~~~~~~~~~-~~l~---~~~v~~v~~D~~d~~~l~~ 73 (308)
T 1qyc_A 5 SRILLIGATGYIGRHVAKASLDLG-------HPTFLLVRESTASSNSEKAQLL-ESFK---ASGANIVHGSIDDHASLVE 73 (308)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTT-------CCEEEECCCCCTTTTHHHHHHH-HHHH---TTTCEEECCCTTCHHHHHH
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCC-------CCEEEEECCcccccCHHHHHHH-HHHH---hCCCEEEEeccCCHHHHHH
Confidence 479999999999999999999987 7899999973 343322 2332 2468899999999999999
Q ss_pred HHhccCeeEeccCCCCC-CcHHHHHHHHHcC-CcEE
Q 014694 85 LCSQTKLLLNCVGPYRL-HGDPVAAACVHSG-CDYL 118 (420)
Q Consensus 85 ~~~~~dvVIn~aGp~~~-~~~~vv~Ac~~~g-~~yv 118 (420)
+++++|+|||++|+... ...+++++|.++| +..+
T Consensus 74 ~~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~ 109 (308)
T 1qyc_A 74 AVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRF 109 (308)
T ss_dssp HHHTCSEEEECCCGGGSGGGHHHHHHHHHHCCCSEE
T ss_pred HHcCCCEEEECCcchhhhhHHHHHHHHHhcCCCceE
Confidence 99999999999997542 3489999999998 7544
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.21 E-value=6.7e-11 Score=113.91 Aligned_cols=97 Identities=20% Similarity=0.272 Sum_probs=79.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh-------hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-------TRVKQALQWASPSHSLSIPILTADTTDPPSLH 83 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~-------~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~ 83 (420)
++|+|+||||++|++++++|++++ ++|.+.+|+. ++.+.+ +++. ..++.++.+|++|++++.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g-------~~V~~~~R~~~~~~~~~~~~~~~-~~l~---~~~v~~v~~D~~d~~~l~ 71 (307)
T 2gas_A 3 NKILILGPTGAIGRHIVWASIKAG-------NPTYALVRKTITAANPETKEELI-DNYQ---SLGVILLEGDINDHETLV 71 (307)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHHT-------CCEEEEECCSCCSSCHHHHHHHH-HHHH---HTTCEEEECCTTCHHHHH
T ss_pred cEEEEECCCchHHHHHHHHHHhCC-------CcEEEEECCCcccCChHHHHHHH-HHHH---hCCCEEEEeCCCCHHHHH
Confidence 469999999999999999999997 7899999987 555443 2221 135789999999999999
Q ss_pred HHHhccCeeEeccCCCCC-CcHHHHHHHHHcC-CcEE
Q 014694 84 RLCSQTKLLLNCVGPYRL-HGDPVAAACVHSG-CDYL 118 (420)
Q Consensus 84 ~~~~~~dvVIn~aGp~~~-~~~~vv~Ac~~~g-~~yv 118 (420)
++++++|+|||++|+... ...+++++|.++| +..+
T Consensus 72 ~~~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~ 108 (307)
T 2gas_A 72 KAIKQVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKF 108 (307)
T ss_dssp HHHTTCSEEEECSSSSCGGGHHHHHHHHHHHCCCSEE
T ss_pred HHHhCCCEEEECCcccccccHHHHHHHHHhcCCceEE
Confidence 999999999999997543 3488999999998 7543
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=99.21 E-value=4.8e-11 Score=117.09 Aligned_cols=96 Identities=13% Similarity=0.073 Sum_probs=79.2
Q ss_pred CCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 014694 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 7 ~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
..+.++|+|+|||||+|++++++|++++ ++|++.+|+.++ .++.++.+|+.|.+++.+++
T Consensus 16 ~~~~~~vlVtGatG~iG~~l~~~L~~~G-------~~V~~~~r~~~~-------------~~~~~~~~Dl~d~~~~~~~~ 75 (347)
T 4id9_A 16 PRGSHMILVTGSAGRVGRAVVAALRTQG-------RTVRGFDLRPSG-------------TGGEEVVGSLEDGQALSDAI 75 (347)
T ss_dssp -----CEEEETTTSHHHHHHHHHHHHTT-------CCEEEEESSCCS-------------SCCSEEESCTTCHHHHHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhCC-------CEEEEEeCCCCC-------------CCccEEecCcCCHHHHHHHH
Confidence 3455689999999999999999999998 789999998654 25789999999999999999
Q ss_pred hccCeeEeccCCCCCCc--------------HHHHHHHHHcCC-cEEecCC
Q 014694 87 SQTKLLLNCVGPYRLHG--------------DPVAAACVHSGC-DYLDISG 122 (420)
Q Consensus 87 ~~~dvVIn~aGp~~~~~--------------~~vv~Ac~~~g~-~yvdisg 122 (420)
+++|+|||+|++..... .+++++|.+.++ ++|.+|.
T Consensus 76 ~~~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS 126 (347)
T 4id9_A 76 MGVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASS 126 (347)
T ss_dssp TTCSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred hCCCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 99999999999764321 678999999888 6777775
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.20 E-value=1.7e-11 Score=119.96 Aligned_cols=107 Identities=11% Similarity=0.085 Sum_probs=81.7
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
..++|+|+|||||||++++++|++++ ++|++.+|+.++.++..+.+......++.++.+|++|++++.++++
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 76 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHG-------YDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA 76 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCC-------CcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc
Confidence 45689999999999999999999998 7999999986654443333210012467889999999999999998
Q ss_pred -ccCeeEeccCCCCCC----------------cHHHHHHHHHcCC-cEEecCC
Q 014694 88 -QTKLLLNCVGPYRLH----------------GDPVAAACVHSGC-DYLDISG 122 (420)
Q Consensus 88 -~~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~-~yvdisg 122 (420)
++|+|||+||..... ..+++++|.+.+. ++|.+|.
T Consensus 77 ~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 129 (341)
T 3enk_A 77 HPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSS 129 (341)
T ss_dssp SCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred cCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEec
Confidence 899999999975321 1467777777776 5666654
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=3.9e-11 Score=116.49 Aligned_cols=96 Identities=19% Similarity=0.282 Sum_probs=78.6
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh-HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT-RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~-kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
+|+|+||||++|++++++|++++ ++|.+++|+.+ +.+. ++++. ..+++++.+|++|++++.++++++|
T Consensus 13 ~ilVtGatG~iG~~l~~~L~~~g-------~~V~~l~R~~~~~~~~-~~~l~---~~~v~~v~~Dl~d~~~l~~a~~~~d 81 (318)
T 2r6j_A 13 KILIFGGTGYIGNHMVKGSLKLG-------HPTYVFTRPNSSKTTL-LDEFQ---SLGAIIVKGELDEHEKLVELMKKVD 81 (318)
T ss_dssp CEEEETTTSTTHHHHHHHHHHTT-------CCEEEEECTTCSCHHH-HHHHH---HTTCEEEECCTTCHHHHHHHHTTCS
T ss_pred eEEEECCCchHHHHHHHHHHHCC-------CcEEEEECCCCchhhH-HHHhh---cCCCEEEEecCCCHHHHHHHHcCCC
Confidence 69999999999999999999987 78999999875 4322 22221 1357899999999999999999999
Q ss_pred eeEeccCCCC-CCcHHHHHHHHHcC-CcEE
Q 014694 91 LLLNCVGPYR-LHGDPVAAACVHSG-CDYL 118 (420)
Q Consensus 91 vVIn~aGp~~-~~~~~vv~Ac~~~g-~~yv 118 (420)
+|||++++.. ....+++++|.++| +..+
T Consensus 82 ~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~ 111 (318)
T 2r6j_A 82 VVISALAFPQILDQFKILEAIKVAGNIKRF 111 (318)
T ss_dssp EEEECCCGGGSTTHHHHHHHHHHHCCCCEE
T ss_pred EEEECCchhhhHHHHHHHHHHHhcCCCCEE
Confidence 9999999753 33589999999998 7543
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=1.1e-10 Score=108.69 Aligned_cols=77 Identities=19% Similarity=0.144 Sum_probs=66.0
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
.++|+|+||||++|++++++|++++. .++|++.+|+.++++.+ ..++.++.+|++|++++.++++++
T Consensus 4 ~~~ilVtGasG~iG~~l~~~l~~~~~-----g~~V~~~~r~~~~~~~~--------~~~~~~~~~D~~d~~~~~~~~~~~ 70 (253)
T 1xq6_A 4 LPTVLVTGASGRTGQIVYKKLKEGSD-----KFVAKGLVRSAQGKEKI--------GGEADVFIGDITDADSINPAFQGI 70 (253)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTT-----TCEEEEEESCHHHHHHT--------TCCTTEEECCTTSHHHHHHHHTTC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhcCC-----CcEEEEEEcCCCchhhc--------CCCeeEEEecCCCHHHHHHHHcCC
Confidence 35799999999999999999999831 17999999998876432 236789999999999999999999
Q ss_pred CeeEeccCCC
Q 014694 90 KLLLNCVGPY 99 (420)
Q Consensus 90 dvVIn~aGp~ 99 (420)
|+|||++|..
T Consensus 71 d~vi~~a~~~ 80 (253)
T 1xq6_A 71 DALVILTSAV 80 (253)
T ss_dssp SEEEECCCCC
T ss_pred CEEEEecccc
Confidence 9999999964
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.19 E-value=6.9e-11 Score=114.76 Aligned_cols=97 Identities=18% Similarity=0.303 Sum_probs=79.4
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh------hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP------TRVKQALQWASPSHSLSIPILTADTTDPPSLHR 84 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~------~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~ 84 (420)
++|+|+||||++|++++++|++++ ++|.+++|+. ++.+.+ +.+. ..++.++.+|++|++++.+
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g-------~~V~~~~R~~~~~~~~~~~~~l-~~~~---~~~v~~v~~D~~d~~~l~~ 73 (321)
T 3c1o_A 5 EKIIIYGGTGYIGKFMVRASLSFS-------HPTFIYARPLTPDSTPSSVQLR-EEFR---SMGVTIIEGEMEEHEKMVS 73 (321)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTT-------CCEEEEECCCCTTCCHHHHHHH-HHHH---HTTCEEEECCTTCHHHHHH
T ss_pred cEEEEEcCCchhHHHHHHHHHhCC-------CcEEEEECCcccccChHHHHHH-HHhh---cCCcEEEEecCCCHHHHHH
Confidence 579999999999999999999987 7899999986 343322 2221 2367899999999999999
Q ss_pred HHhccCeeEeccCCCC-CCcHHHHHHHHHcC-Cc-EE
Q 014694 85 LCSQTKLLLNCVGPYR-LHGDPVAAACVHSG-CD-YL 118 (420)
Q Consensus 85 ~~~~~dvVIn~aGp~~-~~~~~vv~Ac~~~g-~~-yv 118 (420)
+++++|+|||++|+.. ....+++++|.++| +. +|
T Consensus 74 a~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v 110 (321)
T 3c1o_A 74 VLKQVDIVISALPFPMISSQIHIINAIKAAGNIKRFL 110 (321)
T ss_dssp HHTTCSEEEECCCGGGSGGGHHHHHHHHHHCCCCEEE
T ss_pred HHcCCCEEEECCCccchhhHHHHHHHHHHhCCccEEe
Confidence 9999999999999753 34589999999998 74 44
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.18 E-value=3.5e-11 Score=112.19 Aligned_cols=99 Identities=17% Similarity=0.247 Sum_probs=81.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
++|+|+||||++|+.++++|++++. ++|++.+|+.++++++ ...++.++.+|++|+++++++++++|
T Consensus 24 k~vlVtGatG~iG~~l~~~L~~~G~------~~V~~~~R~~~~~~~~-------~~~~~~~~~~Dl~d~~~~~~~~~~~D 90 (236)
T 3qvo_A 24 KNVLILGAGGQIARHVINQLADKQT------IKQTLFARQPAKIHKP-------YPTNSQIIMGDVLNHAALKQAMQGQD 90 (236)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCTT------EEEEEEESSGGGSCSS-------CCTTEEEEECCTTCHHHHHHHHTTCS
T ss_pred cEEEEEeCCcHHHHHHHHHHHhCCC------ceEEEEEcChhhhccc-------ccCCcEEEEecCCCHHHHHHHhcCCC
Confidence 4799999999999999999999872 6899999998876321 13467899999999999999999999
Q ss_pred eeEeccCCCCC--CcHHHHHHHHHcCC-cEEecCC
Q 014694 91 LLLNCVGPYRL--HGDPVAAACVHSGC-DYLDISG 122 (420)
Q Consensus 91 vVIn~aGp~~~--~~~~vv~Ac~~~g~-~yvdisg 122 (420)
+|||++|+... ...+++++|.+++. ++|.+|.
T Consensus 91 ~vv~~a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS 125 (236)
T 3qvo_A 91 IVYANLTGEDLDIQANSVIAAMKACDVKRLIFVLS 125 (236)
T ss_dssp EEEEECCSTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred EEEEcCCCCchhHHHHHHHHHHHHcCCCEEEEEec
Confidence 99999997432 23678899998887 5777765
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.17 E-value=6.1e-11 Score=112.88 Aligned_cols=97 Identities=23% Similarity=0.211 Sum_probs=78.7
Q ss_pred eEEEEcCCcHHHHHHHHHHHHh--CCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 12 DVIILGASGFTGKYVVREALKL--FNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~--~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
+|+|+|||||+|++++++|+++ + ++|.+.+|+.++.+.+.. .++.++.+|++|++++.++++++
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g-------~~V~~~~r~~~~~~~~~~-------~~~~~~~~D~~d~~~~~~~~~~~ 66 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPA-------SQIVAIVRNPAKAQALAA-------QGITVRQADYGDEAALTSALQGV 66 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCG-------GGEEEEESCTTTCHHHHH-------TTCEEEECCTTCHHHHHHHTTTC
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCC-------ceEEEEEcChHhhhhhhc-------CCCeEEEcCCCCHHHHHHHHhCC
Confidence 4899999999999999999987 5 789999999887654432 25788999999999999999999
Q ss_pred CeeEeccCCCC----CCcHHHHHHHHHcCC-cEEecCC
Q 014694 90 KLLLNCVGPYR----LHGDPVAAACVHSGC-DYLDISG 122 (420)
Q Consensus 90 dvVIn~aGp~~----~~~~~vv~Ac~~~g~-~yvdisg 122 (420)
|+|||++|+.. ....+++++|.++|+ ++|.+|.
T Consensus 67 d~vi~~a~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss 104 (286)
T 2zcu_A 67 EKLLLISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSL 104 (286)
T ss_dssp SEEEECC--------CHHHHHHHHHHHHTCCEEEEEEE
T ss_pred CEEEEeCCCCchHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 99999999631 123789999999997 6777654
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.17 E-value=5.4e-11 Score=115.95 Aligned_cols=108 Identities=12% Similarity=0.069 Sum_probs=82.9
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEE-EEeCCCHHHHHHHHh
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPIL-TADTTDPPSLHRLCS 87 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i-~~D~~d~~sl~~~~~ 87 (420)
+.++|+|+|||||+|++++++|++++ ++|++.+|+.++.+.+.+.+......++.++ .+|++|.++++++++
T Consensus 10 ~~~~vlVTGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~ 82 (342)
T 1y1p_A 10 EGSLVLVTGANGFVASHVVEQLLEHG-------YKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK 82 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCC-------CEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHc
Confidence 44689999999999999999999987 7999999998877655543310001356777 799999999999999
Q ss_pred ccCeeEeccCCCCCC-------------cHHHHHHHHH-cCC-cEEecCCc
Q 014694 88 QTKLLLNCVGPYRLH-------------GDPVAAACVH-SGC-DYLDISGE 123 (420)
Q Consensus 88 ~~dvVIn~aGp~~~~-------------~~~vv~Ac~~-~g~-~yvdisge 123 (420)
++|+|||+||+.... ..+++++|.+ .++ ++|.+|..
T Consensus 83 ~~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~ 133 (342)
T 1y1p_A 83 GAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSST 133 (342)
T ss_dssp TCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCG
T ss_pred CCCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccH
Confidence 999999999976421 1567788874 454 67776654
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=4.7e-11 Score=116.74 Aligned_cols=105 Identities=16% Similarity=0.233 Sum_probs=82.3
Q ss_pred CCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 014694 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 7 ~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
..+.++|+|+|||||+|++++++|++++ ++|++.+|+.++..++.++ ..++.++.+|++|++++.+++
T Consensus 17 ~~~~~~vlVTGasG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~-----l~~v~~~~~Dl~d~~~~~~~~ 84 (330)
T 2pzm_A 17 RGSHMRILITGGAGCLGSNLIEHWLPQG-------HEILVIDNFATGKREVLPP-----VAGLSVIEGSVTDAGLLERAF 84 (330)
T ss_dssp TTTCCEEEEETTTSHHHHHHHHHHGGGT-------CEEEEEECCSSSCGGGSCS-----CTTEEEEECCTTCHHHHHHHH
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEECCCccchhhhhc-----cCCceEEEeeCCCHHHHHHHH
Confidence 3355789999999999999999999987 7999999975543211111 136788999999999999999
Q ss_pred h--ccCeeEeccCCCCCC-------------cHHHHHHHHHcCC-cEEecCCc
Q 014694 87 S--QTKLLLNCVGPYRLH-------------GDPVAAACVHSGC-DYLDISGE 123 (420)
Q Consensus 87 ~--~~dvVIn~aGp~~~~-------------~~~vv~Ac~~~g~-~yvdisge 123 (420)
+ ++|+||||||..... ..+++++|.++++ ++|.+|..
T Consensus 85 ~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~ 137 (330)
T 2pzm_A 85 DSFKPTHVVHSAAAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQTA 137 (330)
T ss_dssp HHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEEEG
T ss_pred hhcCCCEEEECCccCCCccccChhHHHHHHHHHHHHHHHHHcCCCEEEEecCH
Confidence 9 999999999975430 2578889988887 67777643
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.15 E-value=1.9e-10 Score=113.79 Aligned_cols=107 Identities=13% Similarity=0.088 Sum_probs=81.1
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHH--hCCCCCCCcceEEEEecChhHHHHH---HHHhCC---CCCCCccEEEEeCCCHH
Q 014694 9 ELFDVIILGASGFTGKYVVREALK--LFNFPSSPIKSLALAGRNPTRVKQA---LQWASP---SHSLSIPILTADTTDPP 80 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~--~~~~~~~~~~~v~iagRs~~kl~~~---~~~l~~---~~~~~~~~i~~D~~d~~ 80 (420)
+.++|+|+|||||+|++++++|++ .+ ++|++.+|+....... .+.+.. ....++.++.+|++|++
T Consensus 9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~ 81 (362)
T 3sxp_A 9 ENQTILITGGAGFVGSNLAFHFQENHPK-------AKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPL 81 (362)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHCTT-------SEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhhCCC-------CeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHH
Confidence 446899999999999999999999 66 8999999976521100 000000 01245788999999999
Q ss_pred HHHHH-HhccCeeEeccCCCCCC--------------cHHHHHHHHHcCCcEEecCC
Q 014694 81 SLHRL-CSQTKLLLNCVGPYRLH--------------GDPVAAACVHSGCDYLDISG 122 (420)
Q Consensus 81 sl~~~-~~~~dvVIn~aGp~~~~--------------~~~vv~Ac~~~g~~yvdisg 122 (420)
+++++ ..++|+||||||..... ..+++++|.+.++++|.+|.
T Consensus 82 ~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~V~~SS 138 (362)
T 3sxp_A 82 DLRRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAKVIYASS 138 (362)
T ss_dssp HHHHHTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHhhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCc
Confidence 99999 88999999999965421 16889999999988888775
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.15 E-value=3.6e-11 Score=117.96 Aligned_cols=107 Identities=8% Similarity=0.154 Sum_probs=79.3
Q ss_pred CCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh--HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 014694 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT--RVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 8 ~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~--kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~ 85 (420)
...++|+|+|||||+|++++++|++++. .++|.+.+|+.. ..+.+ +.+. ...++.++.+|++|++++.++
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-----~~~v~~~~~~~~~~~~~~l-~~~~--~~~~~~~~~~Dl~d~~~~~~~ 93 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQSYE-----TYKIINFDALTYSGNLNNV-KSIQ--DHPNYYFVKGEIQNGELLEHV 93 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHHCT-----TEEEEEEECCCTTCCGGGG-TTTT--TCTTEEEEECCTTCHHHHHHH
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhhCC-----CcEEEEEeccccccchhhh-hhhc--cCCCeEEEEcCCCCHHHHHHH
Confidence 3457899999999999999999999873 167777777541 21111 1111 235788999999999999999
Q ss_pred Hhc--cCeeEeccCCCCCC----------------cHHHHHHHHHcCCc-EEecCC
Q 014694 86 CSQ--TKLLLNCVGPYRLH----------------GDPVAAACVHSGCD-YLDISG 122 (420)
Q Consensus 86 ~~~--~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~~-yvdisg 122 (420)
+++ +|+|||+||+.... ..+++++|.+.++. +|.+|.
T Consensus 94 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS 149 (346)
T 4egb_A 94 IKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVST 149 (346)
T ss_dssp HHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEE
T ss_pred HhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 997 99999999975422 16789999999884 777765
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.15 E-value=3.8e-11 Score=117.39 Aligned_cols=106 Identities=19% Similarity=0.228 Sum_probs=80.0
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHH--HHHhCCCCCCCccEEEEeCCCHHHHHHHHh
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQA--LQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~--~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
.++|+|+|||||||++++++|++++ ++|.+..|+.++.+.. +..+. ...++.++.+|++|++++.++++
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G-------~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~ 79 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKG-------YAVNTTVRDPDNQKKVSHLLELQ--ELGDLKIFRADLTDELSFEAPIA 79 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTT-------CEEEEEESCTTCTTTTHHHHHHG--GGSCEEEEECCTTTSSSSHHHHT
T ss_pred CCEEEEECCchHHHHHHHHHHHHCC-------CEEEEEEcCcchhhhHHHHHhcC--CCCcEEEEecCCCChHHHHHHHc
Confidence 4689999999999999999999988 7899889986542111 11221 12357789999999999999999
Q ss_pred ccCeeEeccCCCCCC---------------cHHHHHHHHHcC-C-cEEecCCcH
Q 014694 88 QTKLLLNCVGPYRLH---------------GDPVAAACVHSG-C-DYLDISGEP 124 (420)
Q Consensus 88 ~~dvVIn~aGp~~~~---------------~~~vv~Ac~~~g-~-~yvdisge~ 124 (420)
++|+|||+|++.... ..+++++|.+++ + ++|.+|...
T Consensus 80 ~~D~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~ 133 (338)
T 2rh8_A 80 GCDFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAA 133 (338)
T ss_dssp TCSEEEEESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHH
T ss_pred CCCEEEEeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHH
Confidence 999999999975311 156788888875 5 577776644
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.14 E-value=1.5e-10 Score=111.25 Aligned_cols=102 Identities=15% Similarity=0.109 Sum_probs=80.7
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
.++|+|+||||++|++++++|++++. ++|++.+|+.++... +.+. ..++.++.+|++|++++.++++++
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~------~~V~~~~R~~~~~~~--~~l~---~~~~~~~~~D~~d~~~l~~~~~~~ 73 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGT------FKVRVVTRNPRKKAA--KELR---LQGAEVVQGDQDDQVIMELALNGA 73 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCS------SEEEEEESCTTSHHH--HHHH---HTTCEEEECCTTCHHHHHHHHTTC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCC------ceEEEEEcCCCCHHH--HHHH---HCCCEEEEecCCCHHHHHHHHhcC
Confidence 45799999999999999999999862 689999999876421 1111 135788999999999999999999
Q ss_pred CeeEeccCCCCC--------CcHHHHHHHHHcCC-cEEecCC
Q 014694 90 KLLLNCVGPYRL--------HGDPVAAACVHSGC-DYLDISG 122 (420)
Q Consensus 90 dvVIn~aGp~~~--------~~~~vv~Ac~~~g~-~yvdisg 122 (420)
|+|||++|.... ...+++++|.++|+ ++|.+|.
T Consensus 74 d~vi~~a~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~ 115 (299)
T 2wm3_A 74 YATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGL 115 (299)
T ss_dssp SEEEECCCHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred CEEEEeCCCCccccchHHHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 999999985421 13678899999987 5666553
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=9.9e-11 Score=111.26 Aligned_cols=96 Identities=15% Similarity=0.130 Sum_probs=79.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
.+|+||||||+||++++++|++++ .+|++.+|+..+.+ ..++.++.+|++|++++.++++++|
T Consensus 4 k~vlVTGasg~IG~~la~~L~~~G-------~~V~~~~r~~~~~~----------~~~~~~~~~Dl~d~~~~~~~~~~~D 66 (267)
T 3rft_A 4 KRLLVTGAAGQLGRVMRERLAPMA-------EILRLADLSPLDPA----------GPNEECVQCDLADANAVNAMVAGCD 66 (267)
T ss_dssp EEEEEESTTSHHHHHHHHHTGGGE-------EEEEEEESSCCCCC----------CTTEEEEECCTTCHHHHHHHHTTCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcC-------CEEEEEecCCcccc----------CCCCEEEEcCCCCHHHHHHHHcCCC
Confidence 469999999999999999999987 89999999876542 2467899999999999999999999
Q ss_pred eeEeccCCCCCCc------------HHHHHHHHHcCC-cEEecCCc
Q 014694 91 LLLNCVGPYRLHG------------DPVAAACVHSGC-DYLDISGE 123 (420)
Q Consensus 91 vVIn~aGp~~~~~------------~~vv~Ac~~~g~-~yvdisge 123 (420)
+|||+||...... .+++++|.+++. ++|.+|..
T Consensus 67 ~vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~ 112 (267)
T 3rft_A 67 GIVHLGGISVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSN 112 (267)
T ss_dssp EEEECCSCCSCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEG
T ss_pred EEEECCCCcCcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcch
Confidence 9999999753321 567888888876 67776643
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.13 E-value=1.2e-10 Score=115.57 Aligned_cols=103 Identities=15% Similarity=0.160 Sum_probs=82.8
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEe-CCCHHHHHHHHhc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTAD-TTDPPSLHRLCSQ 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D-~~d~~sl~~~~~~ 88 (420)
.++|+|+|||||+|++++++|++++ ++|++.+|+.++... +.+. ...++.++.+| ++|++++.+++++
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g-------~~V~~~~R~~~~~~~--~~l~--~~~~v~~v~~D~l~d~~~l~~~~~~ 73 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVG-------HHVRAQVHSLKGLIA--EELQ--AIPNVTLFQGPLLNNVPLMDTLFEG 73 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTT-------CCEEEEESCSCSHHH--HHHH--TSTTEEEEESCCTTCHHHHHHHHTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC-------CEEEEEECCCChhhH--HHHh--hcCCcEEEECCccCCHHHHHHHHhc
Confidence 4579999999999999999999987 789999998876521 1121 12357889999 9999999999999
Q ss_pred cCeeEeccCCCC----CCcHHHHHHHHHcC-C-cEEecCCc
Q 014694 89 TKLLLNCVGPYR----LHGDPVAAACVHSG-C-DYLDISGE 123 (420)
Q Consensus 89 ~dvVIn~aGp~~----~~~~~vv~Ac~~~g-~-~yvdisge 123 (420)
+|+|||+++.+. ..+.+++++|.++| + ++|.+|..
T Consensus 74 ~d~Vi~~a~~~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~ 114 (352)
T 1xgk_A 74 AHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMP 114 (352)
T ss_dssp CSEEEECCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECC
T ss_pred CCEEEEcCCCCCcHHHHHHHHHHHHHHHcCCccEEEEeCCc
Confidence 999999998652 23588999999999 6 78877743
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.12 E-value=1.2e-10 Score=113.82 Aligned_cols=105 Identities=20% Similarity=0.245 Sum_probs=79.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHH--HhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQ--WASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~--~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
.+|+|+|||||||++++++|++++ ++|.+..|+.++.+++.. ++.. ...++.++.+|++|++++++++++
T Consensus 6 ~~vlVTGatGfIG~~l~~~L~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~ 77 (337)
T 2c29_D 6 ETVCVTGASGFIGSWLVMRLLERG-------YTVRATVRDPTNVKKVKHLLDLPK-AETHLTLWKADLADEGSFDEAIKG 77 (337)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT-------CEEEEEESCTTCHHHHHHHHTSTT-HHHHEEEEECCTTSTTTTHHHHTT
T ss_pred CEEEEECCchHHHHHHHHHHHHCC-------CEEEEEECCcchhHHHHHHHhccc-CCCeEEEEEcCCCCHHHHHHHHcC
Confidence 479999999999999999999987 789988998774432221 1210 012467889999999999999999
Q ss_pred cCeeEeccCCCCCC---------------cHHHHHHHHHcC-C-cEEecCCc
Q 014694 89 TKLLLNCVGPYRLH---------------GDPVAAACVHSG-C-DYLDISGE 123 (420)
Q Consensus 89 ~dvVIn~aGp~~~~---------------~~~vv~Ac~~~g-~-~yvdisge 123 (420)
+|+|||+|++.... ..+++++|.+++ + ++|.+|..
T Consensus 78 ~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~ 129 (337)
T 2c29_D 78 CTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSA 129 (337)
T ss_dssp CSEEEECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCG
T ss_pred CCEEEEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeH
Confidence 99999999975321 156788888877 4 57777653
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=99.12 E-value=1.4e-10 Score=114.24 Aligned_cols=108 Identities=13% Similarity=0.131 Sum_probs=83.5
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh----HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT----RVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~----kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~ 85 (420)
.++|+|+|||||+|++++++|++.+ ++|++++|+.. +++.+.+.+......++.++.+|++|.+++.++
T Consensus 27 ~~~vlVtGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 99 (352)
T 1sb8_A 27 PKVWLITGVAGFIGSNLLETLLKLD-------QKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNA 99 (352)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHH
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHH
Confidence 3589999999999999999999987 79999999753 454444433200014678899999999999999
Q ss_pred HhccCeeEeccCCCCC-----C-----------cHHHHHHHHHcCC-cEEecCCcH
Q 014694 86 CSQTKLLLNCVGPYRL-----H-----------GDPVAAACVHSGC-DYLDISGEP 124 (420)
Q Consensus 86 ~~~~dvVIn~aGp~~~-----~-----------~~~vv~Ac~~~g~-~yvdisge~ 124 (420)
++++|+||||||+... . ..+++++|.+.++ ++|.+|...
T Consensus 100 ~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~ 155 (352)
T 1sb8_A 100 CAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSS 155 (352)
T ss_dssp HTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGG
T ss_pred hcCCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHH
Confidence 9999999999997531 0 1678899998887 577776543
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.11 E-value=1.1e-10 Score=114.00 Aligned_cols=101 Identities=15% Similarity=0.147 Sum_probs=80.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHh-CCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCC-HHHHHHHHhc
Q 014694 11 FDVIILGASGFTGKYVVREALKL-FNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTD-PPSLHRLCSQ 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~-~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d-~~sl~~~~~~ 88 (420)
|+|+|+|||||+|++++++|+++ + ++|.+.+|+.++++.+. ...++.++.+|++| .+.+.+++++
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g-------~~V~~~~r~~~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~~~ 67 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDH-------YEVYGLDIGSDAISRFL------NHPHFHFVEGDISIHSEWIEYHVKK 67 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTT-------CEEEEEESCCGGGGGGT------TCTTEEEEECCTTTCSHHHHHHHHH
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCC-------CEEEEEeCCcchHHHhh------cCCCeEEEeccccCcHHHHHhhccC
Confidence 47999999999999999999997 5 79999999987754321 12467889999998 4678889999
Q ss_pred cCeeEeccCCCCCC----------------cHHHHHHHHHcCCcEEecCCcH
Q 014694 89 TKLLLNCVGPYRLH----------------GDPVAAACVHSGCDYLDISGEP 124 (420)
Q Consensus 89 ~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~~yvdisge~ 124 (420)
+|+||||||..... ..+++++|.+.+.++|.+|...
T Consensus 68 ~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~SS~~ 119 (345)
T 2bll_A 68 CDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSE 119 (345)
T ss_dssp CSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGG
T ss_pred CCEEEEcccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEecHH
Confidence 99999999964310 1578899998887788887643
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=99.11 E-value=1.1e-10 Score=114.42 Aligned_cols=105 Identities=12% Similarity=0.183 Sum_probs=80.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhH-HHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR-VKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~k-l~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
++|+|+|||||+|++++++|+++++ .++|++.+|+... ....++++. ..++.++.+|++|++++.++++++
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~~-----g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~ 76 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNHP-----DVHVTVLDKLTYAGNKANLEAIL---GDRVELVVGDIADAELVDKLAAKA 76 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCT-----TCEEEEEECCCTTCCGGGTGGGC---SSSEEEEECCTTCHHHHHHHHTTC
T ss_pred cEEEEeCCccHHHHHHHHHHHHhCC-----CCEEEEEeCCCCCCChhHHhhhc---cCCeEEEECCCCCHHHHHHHhhcC
Confidence 4799999999999999999999831 1789999996421 111112221 246788999999999999999999
Q ss_pred CeeEeccCCCCCC----------------cHHHHHHHHHcCCcEEecCCc
Q 014694 90 KLLLNCVGPYRLH----------------GDPVAAACVHSGCDYLDISGE 123 (420)
Q Consensus 90 dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~~yvdisge 123 (420)
|+||||||+.... ..+++++|.+.++++|.+|..
T Consensus 77 d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~v~~SS~ 126 (348)
T 1oc2_A 77 DAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTD 126 (348)
T ss_dssp SEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEG
T ss_pred CEEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCCeEEEeccc
Confidence 9999999975310 267889999888888888754
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.11 E-value=2.4e-10 Score=111.69 Aligned_cols=105 Identities=16% Similarity=0.204 Sum_probs=80.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh-hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc-
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~-~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~- 88 (420)
++|+|+|||||+|++++++|++.+ ++|++.+|+. ...+...+.+. ...++.++.+|++|++++++++++
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~l~--~~~~~~~~~~Dl~d~~~~~~~~~~~ 72 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQG-------IDLIVFDNLSRKGATDNLHWLS--SLGNFEFVHGDIRNKNDVTRLITKY 72 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEECCCSTTHHHHHHHHH--TTCCCEEEECCTTCHHHHHHHHHHH
T ss_pred cEEEEeCCCchhHHHHHHHHHhCC-------CEEEEEeCCCccCchhhhhhhc--cCCceEEEEcCCCCHHHHHHHHhcc
Confidence 479999999999999999999987 7999999853 22222223332 123578899999999999999998
Q ss_pred -cCeeEeccCCCCCC----------------cHHHHHHHHHcCC--cEEecCCcH
Q 014694 89 -TKLLLNCVGPYRLH----------------GDPVAAACVHSGC--DYLDISGEP 124 (420)
Q Consensus 89 -~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~--~yvdisge~ 124 (420)
+|+|||+||+.... ..+++++|.+.++ ++|.+|...
T Consensus 73 ~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~ 127 (347)
T 1orr_A 73 MPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNK 127 (347)
T ss_dssp CCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGG
T ss_pred CCCEEEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHH
Confidence 99999999975320 1578899998886 477777543
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=99.11 E-value=1.7e-10 Score=113.70 Aligned_cols=105 Identities=13% Similarity=0.128 Sum_probs=83.2
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc-
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~- 88 (420)
.++|+|+|||||+|++++++|++++ ++|++.+|+.++.+.+.+.+. ...++.++.+|+.|++++.+++++
T Consensus 9 ~~~vlVtGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~ 79 (357)
T 1rkx_A 9 GKRVFVTGHTGFKGGWLSLWLQTMG-------ATVKGYSLTAPTVPSLFETAR--VADGMQSEIGDIRDQNKLLESIREF 79 (357)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESSCSSSSCHHHHTT--TTTTSEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHhCC-------CeEEEEeCCCcccchhhHhhc--cCCceEEEEccccCHHHHHHHHHhc
Confidence 4689999999999999999999987 799999998766544444442 134688999999999999999987
Q ss_pred -cCeeEeccCCCCCC----------------cHHHHHHHHHcC-C-cEEecCCc
Q 014694 89 -TKLLLNCVGPYRLH----------------GDPVAAACVHSG-C-DYLDISGE 123 (420)
Q Consensus 89 -~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g-~-~yvdisge 123 (420)
+|+||||||..... ..+++++|.+.+ + ++|.+|..
T Consensus 80 ~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~ 133 (357)
T 1rkx_A 80 QPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSD 133 (357)
T ss_dssp CCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCG
T ss_pred CCCEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCH
Confidence 89999999953210 156888998876 4 67777764
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=99.10 E-value=3.3e-10 Score=109.51 Aligned_cols=94 Identities=15% Similarity=0.182 Sum_probs=78.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
++|+|+|||||+|++++++|++++ ++|.+++|+.++.+ + .++.++.+|++ ++++.++++++|
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~--~--------~~~~~~~~Dl~-~~~~~~~~~~~d 64 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKNDG-------NTPIILTRSIGNKA--I--------NDYEYRVSDYT-LEDLINQLNDVD 64 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCCC---------------CCEEEECCCC-HHHHHHHTTTCS
T ss_pred CEEEEECCCcHHHHHHHHHHHhCC-------CEEEEEeCCCCccc--C--------CceEEEEcccc-HHHHHHhhcCCC
Confidence 589999999999999999999987 79999999954432 1 15789999999 999999999999
Q ss_pred eeEeccCCCCCC------------cHHHHHHHHHcCCc-EEecCC
Q 014694 91 LLLNCVGPYRLH------------GDPVAAACVHSGCD-YLDISG 122 (420)
Q Consensus 91 vVIn~aGp~~~~------------~~~vv~Ac~~~g~~-yvdisg 122 (420)
+||||||+.... ..+++++|.++++. +|.+|.
T Consensus 65 ~Vih~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS 109 (311)
T 3m2p_A 65 AVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYAST 109 (311)
T ss_dssp EEEECCCCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred EEEEccccCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 999999975432 27889999999985 777775
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=99.09 E-value=1.7e-10 Score=115.12 Aligned_cols=100 Identities=11% Similarity=0.056 Sum_probs=81.2
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
.++|+|+|||||+|++++++|++++ ++|++.+|+.++.... ...++.++.+|++|.+++.++++++
T Consensus 29 ~~~vlVtGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~-------~~~~v~~~~~Dl~d~~~~~~~~~~~ 94 (379)
T 2c5a_A 29 NLKISITGAGGFIASHIARRLKHEG-------HYVIASDWKKNEHMTE-------DMFCDEFHLVDLRVMENCLKVTEGV 94 (379)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESSCCSSSCG-------GGTCSEEEECCTTSHHHHHHHHTTC
T ss_pred CCeEEEECCccHHHHHHHHHHHHCC-------CeEEEEECCCccchhh-------ccCCceEEECCCCCHHHHHHHhCCC
Confidence 3589999999999999999999987 7999999987553211 1236788999999999999999999
Q ss_pred CeeEeccCCCCC-----C------------cHHHHHHHHHcCC-cEEecCCc
Q 014694 90 KLLLNCVGPYRL-----H------------GDPVAAACVHSGC-DYLDISGE 123 (420)
Q Consensus 90 dvVIn~aGp~~~-----~------------~~~vv~Ac~~~g~-~yvdisge 123 (420)
|+|||+||+... . ..+++++|.++++ ++|.+|..
T Consensus 95 d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~ 146 (379)
T 2c5a_A 95 DHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSA 146 (379)
T ss_dssp SEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEG
T ss_pred CEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeeh
Confidence 999999997532 1 1578899999887 67777753
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.09 E-value=1.3e-10 Score=113.74 Aligned_cols=102 Identities=13% Similarity=0.190 Sum_probs=80.4
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc-
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~- 88 (420)
.++|+|+|||||+|++++++|++++ ++|++.+|+.....+ .+. ...++.++.+|++|++++++++++
T Consensus 21 ~~~vlVTGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~---~l~--~~~~~~~~~~Dl~d~~~~~~~~~~~ 88 (333)
T 2q1w_A 21 MKKVFITGICGQIGSHIAELLLERG-------DKVVGIDNFATGRRE---HLK--DHPNLTFVEGSIADHALVNQLIGDL 88 (333)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEECCSSCCGG---GSC--CCTTEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCC-------CEEEEEECCCccchh---hHh--hcCCceEEEEeCCCHHHHHHHHhcc
Confidence 3689999999999999999999987 799999997543211 111 113678899999999999999998
Q ss_pred -cCeeEeccCCCCCC-------------cHHHHHHHHHcCC-cEEecCCc
Q 014694 89 -TKLLLNCVGPYRLH-------------GDPVAAACVHSGC-DYLDISGE 123 (420)
Q Consensus 89 -~dvVIn~aGp~~~~-------------~~~vv~Ac~~~g~-~yvdisge 123 (420)
+|+||||||..... ..+++++|.++++ ++|.+|..
T Consensus 89 ~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~ 138 (333)
T 2q1w_A 89 QPDAVVHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQTA 138 (333)
T ss_dssp CCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEG
T ss_pred CCcEEEECceecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECcH
Confidence 99999999975431 2578889988887 67777653
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.09 E-value=4.8e-11 Score=111.02 Aligned_cols=76 Identities=22% Similarity=0.264 Sum_probs=64.7
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcc--eEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIK--SLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~--~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
.++|+|+||||++|++++++|++++ . +|++.+|+.++++... ..++.++.+|++|++++.++++
T Consensus 18 ~~~vlVtGasg~iG~~l~~~L~~~G-------~~~~V~~~~r~~~~~~~~~-------~~~~~~~~~D~~d~~~~~~~~~ 83 (242)
T 2bka_A 18 NKSVFILGASGETGRVLLKEILEQG-------LFSKVTLIGRRKLTFDEEA-------YKNVNQEVVDFEKLDDYASAFQ 83 (242)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHHT-------CCSEEEEEESSCCCCCSGG-------GGGCEEEECCGGGGGGGGGGGS
T ss_pred CCeEEEECCCcHHHHHHHHHHHcCC-------CCCEEEEEEcCCCCccccc-------cCCceEEecCcCCHHHHHHHhc
Confidence 3579999999999999999999998 6 8999999877653211 1256789999999999999999
Q ss_pred ccCeeEeccCCC
Q 014694 88 QTKLLLNCVGPY 99 (420)
Q Consensus 88 ~~dvVIn~aGp~ 99 (420)
++|+||||+|..
T Consensus 84 ~~d~vi~~ag~~ 95 (242)
T 2bka_A 84 GHDVGFCCLGTT 95 (242)
T ss_dssp SCSEEEECCCCC
T ss_pred CCCEEEECCCcc
Confidence 999999999975
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.07 E-value=1.3e-09 Score=103.07 Aligned_cols=79 Identities=16% Similarity=0.161 Sum_probs=71.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|+||++++++|++++ .+|++.+|+.++++++.++++ .++.++.+|++|+++++++++
T Consensus 9 k~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~ 77 (259)
T 4e6p_A 9 KSALITGSARGIGRAFAEAYVREG-------ATVAIADIDIERARQAAAEIG----PAAYAVQMDVTRQDSIDAAIAATV 77 (259)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHC----TTEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhC----CCceEEEeeCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 799999999999998888874 467889999999999999887
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 78 ~~~g~id~lv~~Ag~~~ 94 (259)
T 4e6p_A 78 EHAGGLDILVNNAALFD 94 (259)
T ss_dssp HHSSSCCEEEECCCCCC
T ss_pred HHcCCCCEEEECCCcCC
Confidence 7899999999643
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.07 E-value=1.2e-09 Score=101.99 Aligned_cols=82 Identities=16% Similarity=0.099 Sum_probs=69.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|++|++++++|++++ ++|++.+|+.++++++.+++......++.++.+|++|+++++++++
T Consensus 3 k~vlItGasggiG~~~a~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 75 (250)
T 2cfc_A 3 RVAIVTGASSGNGLAIATRFLARG-------DRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATM 75 (250)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence 369999999999999999999998 7999999999998887776621112357789999999999999887
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
+.|+|||+||..
T Consensus 76 ~~~~~id~li~~Ag~~ 91 (250)
T 2cfc_A 76 EQFGAIDVLVNNAGIT 91 (250)
T ss_dssp HHHSCCCEEEECCCCC
T ss_pred HHhCCCCEEEECCCCC
Confidence 789999999964
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.06 E-value=1.9e-09 Score=101.98 Aligned_cols=79 Identities=18% Similarity=0.062 Sum_probs=69.6
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
...++|+||+|+||++++++|++++ ++|++.+|+.++++++.+++. .++.++.+|++|+++++++++
T Consensus 12 ~k~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~d~~~v~~~~~~~ 80 (263)
T 3ak4_A 12 GRKAIVTGGSKGIGAAIARALDKAG-------ATVAIADLDVMAAQAVVAGLE----NGGFAVEVDVTKRASVDAAMQKA 80 (263)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHTCT----TCCEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHh----cCCeEEEEeCCCHHHHHHHHHHH
Confidence 3479999999999999999999998 799999999999888777653 257789999999999999887
Q ss_pred -----ccCeeEeccCCC
Q 014694 88 -----QTKLLLNCVGPY 99 (420)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (420)
+.|+|||+||..
T Consensus 81 ~~~~g~iD~lv~~Ag~~ 97 (263)
T 3ak4_A 81 IDALGGFDLLCANAGVS 97 (263)
T ss_dssp HHHHTCCCEEEECCCCC
T ss_pred HHHcCCCCEEEECCCcC
Confidence 789999999964
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.06 E-value=2.5e-10 Score=111.34 Aligned_cols=104 Identities=14% Similarity=0.079 Sum_probs=80.4
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHH-HHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc-
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVK-QALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~-~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~- 88 (420)
++|+|+|||||+|++++++|++++ ++|++.+|+.++.+ ..++.+. ...++.++.+|++|++++.+++++
T Consensus 4 ~~vlVtGatG~iG~~l~~~L~~~G-------~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~ 74 (345)
T 2z1m_A 4 KRALITGIRGQDGAYLAKLLLEKG-------YEVYGADRRSGEFASWRLKELG--IENDVKIIHMDLLEFSNIIRTIEKV 74 (345)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEECSCCSTTTTHHHHHTT--CTTTEEECCCCTTCHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCC-------CEEEEEECCCcccccccHhhcc--ccCceeEEECCCCCHHHHHHHHHhc
Confidence 579999999999999999999987 79999999876532 1223332 123577889999999999999986
Q ss_pred -cCeeEeccCCCCCC----------------cHHHHHHHHHcCC--cEEecCCc
Q 014694 89 -TKLLLNCVGPYRLH----------------GDPVAAACVHSGC--DYLDISGE 123 (420)
Q Consensus 89 -~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~--~yvdisge 123 (420)
+|+||||||..... ..+++++|.+.++ ++|.+|..
T Consensus 75 ~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~ 128 (345)
T 2z1m_A 75 QPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTS 128 (345)
T ss_dssp CCSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEG
T ss_pred CCCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEech
Confidence 59999999975310 2678888888874 67777654
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=99.06 E-value=2.9e-10 Score=109.52 Aligned_cols=97 Identities=13% Similarity=0.061 Sum_probs=78.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHh--CCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 11 FDVIILGASGFTGKYVVREALKL--FNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~--~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
++|+|+|||||+|++++++|+++ + ++|.+.+|+.++.+ +. .++.++.+|++|++++.++++
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~~~g-------~~V~~~~r~~~~~~-~~--------~~~~~~~~D~~d~~~~~~~~~~ 66 (312)
T 2yy7_A 3 PKILIIGACGQIGTELTQKLRKLYGT-------ENVIASDIRKLNTD-VV--------NSGPFEVVNALDFNQIEHLVEV 66 (312)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHHHCG-------GGEEEEESCCCSCH-HH--------HSSCEEECCTTCHHHHHHHHHH
T ss_pred ceEEEECCccHHHHHHHHHHHHhCCC-------CEEEEEcCCCcccc-cc--------CCCceEEecCCCHHHHHHHHhh
Confidence 57999999999999999999998 5 78999999876532 21 146789999999999999998
Q ss_pred -ccCeeEeccCCCCCC---------------cHHHHHHHHHcCC-cEEecCCc
Q 014694 88 -QTKLLLNCVGPYRLH---------------GDPVAAACVHSGC-DYLDISGE 123 (420)
Q Consensus 88 -~~dvVIn~aGp~~~~---------------~~~vv~Ac~~~g~-~yvdisge 123 (420)
++|+|||+||..... ..+++++|.+.++ ++|.+|..
T Consensus 67 ~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~ 119 (312)
T 2yy7_A 67 HKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSI 119 (312)
T ss_dssp TTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEG
T ss_pred cCCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccH
Confidence 899999999975321 1578888988887 67777654
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.05 E-value=1.5e-09 Score=103.05 Aligned_cols=84 Identities=14% Similarity=0.151 Sum_probs=72.2
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
...++|+||+|+||+.++++|++++ .+|++.+|+.++++++.+++......++.++.+|++|+++++++++
T Consensus 10 ~k~vlVTGas~gIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 82 (262)
T 3pk0_A 10 GRSVVVTGGTKGIGRGIATVFARAG-------ANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRA 82 (262)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 7999999999999888877743112467889999999999999887
Q ss_pred -----ccCeeEeccCCCC
Q 014694 88 -----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 83 ~~~~g~id~lvnnAg~~~ 100 (262)
T 3pk0_A 83 VEEFGGIDVVCANAGVFP 100 (262)
T ss_dssp HHHHSCCSEEEECCCCCC
T ss_pred HHHhCCCCEEEECCCCCC
Confidence 6899999999653
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.05 E-value=1.7e-09 Score=103.01 Aligned_cols=83 Identities=18% Similarity=0.141 Sum_probs=70.3
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
...|+|+||+|+||+.++++|++++ .+|++.+|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 31 ~k~vlITGasggIG~~la~~L~~~G-------~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~v~~~~~~~ 102 (272)
T 1yb1_A 31 GEIVLITGAGHGIGRLTAYEFAKLK-------SKLVLWDINKHGLEETAAKCKG-LGAKVHTFVVDCSNREDIYSSAKKV 102 (272)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CEEEEEEcCHHHHHHHHHHHHh-cCCeEEEEEeeCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 7999999999888877766531 12467889999999999998876
Q ss_pred -----ccCeeEeccCCCC
Q 014694 88 -----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 103 ~~~~g~iD~li~~Ag~~~ 120 (272)
T 1yb1_A 103 KAEIGDVSILVNNAGVVY 120 (272)
T ss_dssp HHHTCCCSEEEECCCCCC
T ss_pred HHHCCCCcEEEECCCcCC
Confidence 6799999999653
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=99.05 E-value=1.9e-09 Score=101.00 Aligned_cols=80 Identities=21% Similarity=0.203 Sum_probs=69.0
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCc-cEEEEeCCCHHHHHHHHh-
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSI-PILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~-~~i~~D~~d~~sl~~~~~- 87 (420)
...++|+||+|++|++++++|++++ ++|++.+|+.++++++.++++ .++ .++.+|++|+++++++++
T Consensus 11 ~k~vlITGasggiG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~ 79 (254)
T 2wsb_A 11 GACAAVTGAGSGIGLEICRAFAASG-------ARLILIDREAAALDRAAQELG----AAVAARIVADVTDAEAMTAAAAE 79 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHG----GGEEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhc----ccceeEEEEecCCHHHHHHHHHH
Confidence 3479999999999999999999998 799999999999888777663 245 778999999999998874
Q ss_pred -----ccCeeEeccCCCC
Q 014694 88 -----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 80 ~~~~~~id~li~~Ag~~~ 97 (254)
T 2wsb_A 80 AEAVAPVSILVNSAGIAR 97 (254)
T ss_dssp HHHHSCCCEEEECCCCCC
T ss_pred HHhhCCCcEEEECCccCC
Confidence 6899999999643
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.05 E-value=1.5e-09 Score=100.53 Aligned_cols=77 Identities=21% Similarity=0.135 Sum_probs=67.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..|+|+||+|++|+.++++|++++ ++|++.+|+.++++++.+++. ++.++.+|++|+++++++++
T Consensus 6 k~vlVtGasggiG~~~a~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~ 73 (234)
T 2ehd_A 6 GAVLITGASRGIGEATARLLHAKG-------YRVGLMARDEKRLQALAAELE-----GALPLPGDVREEGDWARAVAAME 73 (234)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHST-----TCEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHhh-----hceEEEecCCCHHHHHHHHHHHH
Confidence 469999999999999999999998 799999999999888777652 57889999999999988876
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
+.|+|||++|..
T Consensus 74 ~~~~~id~li~~Ag~~ 89 (234)
T 2ehd_A 74 EAFGELSALVNNAGVG 89 (234)
T ss_dssp HHHSCCCEEEECCCCC
T ss_pred HHcCCCCEEEECCCcC
Confidence 579999999964
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.05 E-value=2.2e-09 Score=101.86 Aligned_cols=84 Identities=13% Similarity=0.065 Sum_probs=69.9
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~-~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
...++|+||+|+||+.++++|++++ ++|++.+|+.++++++.+++.. ....++.++.+|++|+++++++++
T Consensus 13 ~k~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 85 (267)
T 1iy8_A 13 DRVVLITGGGSGLGRATAVRLAAEG-------AKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTA 85 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHH
Confidence 3479999999999999999999998 7999999999988777665521 012467788999999999999887
Q ss_pred ------ccCeeEeccCCCC
Q 014694 88 ------QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 86 ~~~~~g~id~lv~nAg~~~ 104 (267)
T 1iy8_A 86 TTERFGRIDGFFNNAGIEG 104 (267)
T ss_dssp HHHHHSCCSEEEECCCCCC
T ss_pred HHHHcCCCCEEEECCCcCC
Confidence 5799999999653
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=1.5e-09 Score=102.81 Aligned_cols=79 Identities=14% Similarity=0.069 Sum_probs=69.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|+||+.++++|++++ ++|++.+|+.++++++.+++. .++.++.+|++|+++++++++
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~ 76 (260)
T 1nff_A 8 KVALVSGGARGMGASHVRAMVAEG-------AKVVFGDILDEEGKAMAAELA----DAARYVHLDVTQPAQWKAAVDTAV 76 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHTG----GGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhh----cCceEEEecCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 799999999999888777663 246788999999999999987
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 77 ~~~g~iD~lv~~Ag~~~ 93 (260)
T 1nff_A 77 TAFGGLHVLVNNAGILN 93 (260)
T ss_dssp HHHSCCCEEEECCCCCC
T ss_pred HHcCCCCEEEECCCCCC
Confidence 7899999999653
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=9.2e-10 Score=110.02 Aligned_cols=104 Identities=13% Similarity=0.064 Sum_probs=79.5
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHH--------------------HHHHHHhCCCCCCC
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRV--------------------KQALQWASPSHSLS 68 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl--------------------~~~~~~l~~~~~~~ 68 (420)
..++|+|||||||||++++++|++++ ++|++++|+.... +.+.+.. ..+
T Consensus 10 ~~~~vlVTG~tGfIG~~l~~~L~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~----~~~ 78 (404)
T 1i24_A 10 HGSRVMVIGGDGYCGWATALHLSKKN-------YEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALT----GKS 78 (404)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHH----CCC
T ss_pred CCCeEEEeCCCcHHHHHHHHHHHhCC-------CeEEEEEecCccccccccccccccccchhhhhhhhHhhcc----CCc
Confidence 44689999999999999999999987 7999999864321 1111111 246
Q ss_pred ccEEEEeCCCHHHHHHHHhc--cCeeEeccCCCCCC-------------------cHHHHHHHHHcCC--cEEecCCc
Q 014694 69 IPILTADTTDPPSLHRLCSQ--TKLLLNCVGPYRLH-------------------GDPVAAACVHSGC--DYLDISGE 123 (420)
Q Consensus 69 ~~~i~~D~~d~~sl~~~~~~--~dvVIn~aGp~~~~-------------------~~~vv~Ac~~~g~--~yvdisge 123 (420)
+.++.+|++|++++.+++++ +|+|||+||..... ..+++++|.+.+. ++|.+|..
T Consensus 79 v~~~~~Dl~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~ 156 (404)
T 1i24_A 79 IELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTM 156 (404)
T ss_dssp CEEEESCTTSHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCG
T ss_pred eEEEECCCCCHHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcH
Confidence 78899999999999999998 99999999964310 1567889988884 78888764
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.04 E-value=2.9e-10 Score=110.76 Aligned_cols=108 Identities=13% Similarity=0.029 Sum_probs=79.6
Q ss_pred CCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHH-HHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 014694 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVK-QALQWASPSHSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 7 ~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~-~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~ 85 (420)
.+..++|+|+|||||+|++++++|++++ ++|.+.+|+.++.. ..++.+. ...++.++.+|++|++++.++
T Consensus 11 ~~~~~~vlVTGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~ 81 (335)
T 1rpn_A 11 GSMTRSALVTGITGQDGAYLAKLLLEKG-------YRVHGLVARRSSDTRWRLRELG--IEGDIQYEDGDMADACSVQRA 81 (335)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEECCCSSCCCHHHHHTT--CGGGEEEEECCTTCHHHHHHH
T ss_pred cccCCeEEEECCCChHHHHHHHHHHHCC-------CeEEEEeCCCccccccchhhcc--ccCceEEEECCCCCHHHHHHH
Confidence 3455789999999999999999999987 79999999865421 1122221 123577899999999999999
Q ss_pred Hhc--cCeeEeccCCCCCC----------------cHHHHHHHHHcCC--cEEecCCc
Q 014694 86 CSQ--TKLLLNCVGPYRLH----------------GDPVAAACVHSGC--DYLDISGE 123 (420)
Q Consensus 86 ~~~--~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~--~yvdisge 123 (420)
+++ +|+||||||..... ..+++++|.+.++ ++|.+|..
T Consensus 82 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~ 139 (335)
T 1rpn_A 82 VIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTS 139 (335)
T ss_dssp HHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEG
T ss_pred HHHcCCCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCH
Confidence 986 59999999975321 1578889988874 67777653
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=7.9e-10 Score=108.27 Aligned_cols=102 Identities=16% Similarity=0.160 Sum_probs=78.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh----------hHHHHHHHHhCCCCCCCccEEEEeCCCHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP----------TRVKQALQWASPSHSLSIPILTADTTDPP 80 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~----------~kl~~~~~~l~~~~~~~~~~i~~D~~d~~ 80 (420)
++|+|+|||||+|++++++|++.+ ++|++++|+. +.++.+.+.. ..++.++.+|++|++
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~~D~~~~~ 71 (348)
T 1ek6_A 3 EKVLVTGGAGYIGSHTVLELLEAG-------YLPVVIDNFHNAFRGGGSLPESLRRVQELT----GRSVEFEEMDILDQG 71 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTT-------CCEEEEECSSSSCBCSSSSBHHHHHHHHHH----TCCCEEEECCTTCHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEecCCcccccccccHHHHHHHHhcc----CCceEEEECCCCCHH
Confidence 579999999999999999999987 7899988853 2333332211 246788999999999
Q ss_pred HHHHHHh--ccCeeEeccCCCCCC----------------cHHHHHHHHHcCC-cEEecCCc
Q 014694 81 SLHRLCS--QTKLLLNCVGPYRLH----------------GDPVAAACVHSGC-DYLDISGE 123 (420)
Q Consensus 81 sl~~~~~--~~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~-~yvdisge 123 (420)
++.++++ ++|+|||+||+.... ..+++++|.++++ ++|.+|..
T Consensus 72 ~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~ 133 (348)
T 1ek6_A 72 ALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSA 133 (348)
T ss_dssp HHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEG
T ss_pred HHHHHHHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcH
Confidence 9999998 799999999975310 2567888888886 67777653
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.04 E-value=1.3e-09 Score=104.04 Aligned_cols=82 Identities=15% Similarity=0.123 Sum_probs=68.4
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~-~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..++|+||+|+||+.++++|++++ ++|++.+|+.++++++.+++... ...++.++.+|++|+++++++++
T Consensus 33 k~vlVTGasggIG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 105 (279)
T 1xg5_A 33 RLALVTGASGGIGAAVARALVQQG-------LKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAI 105 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCC-------CEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHH
Confidence 469999999999999999999998 79999999998888776655310 11346778999999999998887
Q ss_pred -----ccCeeEeccCCC
Q 014694 88 -----QTKLLLNCVGPY 99 (420)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (420)
++|+|||+||..
T Consensus 106 ~~~~g~iD~vi~~Ag~~ 122 (279)
T 1xg5_A 106 RSQHSGVDICINNAGLA 122 (279)
T ss_dssp HHHHCCCSEEEECCCCC
T ss_pred HHhCCCCCEEEECCCCC
Confidence 689999999964
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=1.1e-09 Score=109.24 Aligned_cols=106 Identities=14% Similarity=0.173 Sum_probs=80.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHH-HhCCCCCCCcceEEEEecChhH---------HHHH---HHHhCCC-CCCC---ccEEE
Q 014694 11 FDVIILGASGFTGKYVVREAL-KLFNFPSSPIKSLALAGRNPTR---------VKQA---LQWASPS-HSLS---IPILT 73 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~-~~~~~~~~~~~~v~iagRs~~k---------l~~~---~~~l~~~-~~~~---~~~i~ 73 (420)
|+|+|+|||||+|++++++|+ +++ ++|++++|+..+ .+.+ ++++... ...+ +.++.
T Consensus 3 m~vlVTGatG~iG~~l~~~L~~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (397)
T 1gy8_A 3 MRVLVCGGAGYIGSHFVRALLRDTN-------HSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEV 75 (397)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCC-------CEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHhCC-------CEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEE
Confidence 689999999999999999999 877 789999987543 3333 3333210 0123 78899
Q ss_pred EeCCCHHHHHHHHh--c-cCeeEeccCCCCCC----------------cHHHHHHHHHcCC-cEEecCCc
Q 014694 74 ADTTDPPSLHRLCS--Q-TKLLLNCVGPYRLH----------------GDPVAAACVHSGC-DYLDISGE 123 (420)
Q Consensus 74 ~D~~d~~sl~~~~~--~-~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~-~yvdisge 123 (420)
+|++|++++.++++ + +|+|||+||+.... ..+++++|.+.++ ++|.+|..
T Consensus 76 ~Dl~d~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~ 145 (397)
T 1gy8_A 76 GDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSA 145 (397)
T ss_dssp SCTTCHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEG
T ss_pred CCCCCHHHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCH
Confidence 99999999999998 6 99999999975421 1568888988887 67777653
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.03 E-value=4.3e-10 Score=109.30 Aligned_cols=100 Identities=11% Similarity=0.106 Sum_probs=80.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--c
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--Q 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--~ 88 (420)
++|+|+|||||+|++++++|++++ ++|.+.+|+..+.. +.+ ..++.++.+|++|++++.++++ +
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~---~~~----~~~~~~~~~D~~~~~~~~~~~~~~~ 67 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDEG-------LSVVVVDNLQTGHE---DAI----TEGAKFYNGDLRDKAFLRDVFTQEN 67 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEECCSSCCG---GGS----CTTSEEEECCTTCHHHHHHHHHHSC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCC-------CEEEEEeCCCcCch---hhc----CCCcEEEECCCCCHHHHHHHHhhcC
Confidence 479999999999999999999987 78999998764421 122 1267889999999999999999 8
Q ss_pred cCeeEeccCCCCCC----------------cHHHHHHHHHcCC-cEEecCCcH
Q 014694 89 TKLLLNCVGPYRLH----------------GDPVAAACVHSGC-DYLDISGEP 124 (420)
Q Consensus 89 ~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~-~yvdisge~ 124 (420)
+|+|||+||+.... ..+++++|.++++ ++|.+|...
T Consensus 68 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~ 120 (330)
T 2c20_A 68 IEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAA 120 (330)
T ss_dssp EEEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGG
T ss_pred CCEEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCce
Confidence 99999999975320 2678889988887 678777643
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.03 E-value=6.8e-10 Score=103.58 Aligned_cols=83 Identities=12% Similarity=0.145 Sum_probs=69.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|++|++++++|++++ ++|++.+|+.++++++.+++......++.++.+|++|+++++++++
T Consensus 8 ~~vlVtGasggiG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 80 (248)
T 2pnf_A 8 KVSLVTGSTRGIGRAIAEKLASAG-------STVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIY 80 (248)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTT-------CEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCC-------CEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHH
Confidence 479999999999999999999988 7999999999888776665420002357789999999999999887
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 81 ~~~~~~d~vi~~Ag~~~ 97 (248)
T 2pnf_A 81 NLVDGIDILVNNAGITR 97 (248)
T ss_dssp HHSSCCSEEEECCCCCC
T ss_pred HhcCCCCEEEECCCCCC
Confidence 7899999999653
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.03 E-value=7.9e-10 Score=103.96 Aligned_cols=83 Identities=14% Similarity=0.159 Sum_probs=70.0
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
...|+|+||+|++|++++++|++++ ++|++.+|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 13 ~k~vlItGasggiG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 84 (260)
T 3awd_A 13 NRVAIVTGGAQNIGLACVTALAEAG-------ARVIIADLDEAMATKAVEDLRM-EGHDVSSVVMDVTNTESVQNAVRSV 84 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCceEEEEecCCCHHHHHHHHHHH
Confidence 3479999999999999999999998 7999999999888777666531 12467889999999999999886
Q ss_pred -----ccCeeEeccCCCC
Q 014694 88 -----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 85 ~~~~~~id~vi~~Ag~~~ 102 (260)
T 3awd_A 85 HEQEGRVDILVACAGICI 102 (260)
T ss_dssp HHHHSCCCEEEECCCCCC
T ss_pred HHHcCCCCEEEECCCCCC
Confidence 6899999999643
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.03 E-value=8.5e-10 Score=106.97 Aligned_cols=82 Identities=13% Similarity=0.130 Sum_probs=71.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|+||+.++++|++++ ++|++++|+.++++++.+++.. ...++.++.+|++|.++++++++
T Consensus 32 k~vlVTGas~gIG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~ 103 (301)
T 3tjr_A 32 RAAVVTGGASGIGLATATEFARRG-------ARLVLSDVDQPALEQAVNGLRG-QGFDAHGVVCDVRHLDEMVRLADEAF 103 (301)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHh-cCCceEEEEccCCCHHHHHHHHHHHH
Confidence 469999999999999999999998 7999999999999888777642 23467889999999999999887
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 104 ~~~g~id~lvnnAg~~~ 120 (301)
T 3tjr_A 104 RLLGGVDVVFSNAGIVV 120 (301)
T ss_dssp HHHSSCSEEEECCCCCC
T ss_pred HhCCCCCEEEECCCcCC
Confidence 6899999999653
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=99.03 E-value=8.5e-10 Score=104.05 Aligned_cols=79 Identities=14% Similarity=0.084 Sum_probs=70.5
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
...|+|+||+|++|+.++++|++++ ++|++.+|+.++++++.++++ .++.++.+|++|+++++++++
T Consensus 12 ~k~vlVTGasggiG~~~a~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~ 80 (265)
T 2o23_A 12 GLVAVITGGASGLGLATAERLVGQG-------ASAVLLDLPNSGGEAQAKKLG----NNCVFAPADVTSEKDVQTALALA 80 (265)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEECTTSSHHHHHHHHC----TTEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCcHhHHHHHHHhC----CceEEEEcCCCCHHHHHHHHHHH
Confidence 4579999999999999999999998 799999999998888877774 467889999999999999887
Q ss_pred -----ccCeeEeccCCC
Q 014694 88 -----QTKLLLNCVGPY 99 (420)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (420)
+.|+|||+||..
T Consensus 81 ~~~~g~id~li~~Ag~~ 97 (265)
T 2o23_A 81 KGKFGRVDVAVNCAGIA 97 (265)
T ss_dssp HHHHSCCCEEEECCCCC
T ss_pred HHHCCCCCEEEECCccC
Confidence 789999999964
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=99.03 E-value=2.7e-09 Score=100.98 Aligned_cols=83 Identities=17% Similarity=0.204 Sum_probs=69.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|+||+.++++|++++ ++|++.+|+.++++++.+++......++.++.+|++|+++++++++
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 80 (263)
T 3ai3_A 8 KVAVITGSSSGIGLAIAEGFAKEG-------AHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVR 80 (263)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCC-------CEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 7999999999988877666521002357789999999999999887
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 81 ~~~g~id~lv~~Ag~~~ 97 (263)
T 3ai3_A 81 SSFGGADILVNNAGTGS 97 (263)
T ss_dssp HHHSSCSEEEECCCCCC
T ss_pred HHcCCCCEEEECCCCCC
Confidence 7899999999653
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.03 E-value=1.2e-09 Score=104.32 Aligned_cols=78 Identities=15% Similarity=0.160 Sum_probs=69.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|+||++++++|++++ ++|++.+|+.++++++.+++. .++.++.+|++|+++++++++
T Consensus 6 k~vlVTGas~gIG~~~a~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~~~~~~~~~~ 74 (281)
T 3m1a_A 6 KVWLVTGASSGFGRAIAEAAVAAG-------DTVIGTARRTEALDDLVAAYP----DRAEAISLDVTDGERIDVVAADVL 74 (281)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT-------CEEEEEESSGGGGHHHHHHCT----TTEEEEECCTTCHHHHHHHHHHHH
T ss_pred cEEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHhcc----CCceEEEeeCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 799999999999988877653 468899999999999999887
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
+.|+|||+||..
T Consensus 75 ~~~g~id~lv~~Ag~~ 90 (281)
T 3m1a_A 75 ARYGRVDVLVNNAGRT 90 (281)
T ss_dssp HHHSCCSEEEECCCCE
T ss_pred HhCCCCCEEEECCCcC
Confidence 679999999964
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=99.03 E-value=1.9e-09 Score=101.76 Aligned_cols=79 Identities=19% Similarity=0.078 Sum_probs=69.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|+||+.++++|++++ ++|++.+|+.++++++.++++ .++.++.+|++|+++++++++
T Consensus 6 k~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~ 74 (254)
T 1hdc_A 6 KTVIITGGARGLGAEAARQAVAAG-------ARVVLADVLDEEGAATARELG----DAARYQHLDVTIEEDWQRVVAYAR 74 (254)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHTTG----GGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhC----CceeEEEecCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 799999999999888777652 356788999999999999887
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 75 ~~~g~iD~lv~nAg~~~ 91 (254)
T 1hdc_A 75 EEFGSVDGLVNNAGIST 91 (254)
T ss_dssp HHHSCCCEEEECCCCCC
T ss_pred HHcCCCCEEEECCCCCC
Confidence 7899999999643
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.03 E-value=6e-10 Score=107.25 Aligned_cols=87 Identities=17% Similarity=0.199 Sum_probs=71.6
Q ss_pred CCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCH-HHHHHH
Q 014694 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDP-PSLHRL 85 (420)
Q Consensus 7 ~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~-~sl~~~ 85 (420)
+.+...|+|+||+|+||+.++++|++++ .+|++++|+.+++++..+++......++.++.+|++|+ ++++++
T Consensus 9 ~~~~k~vlITGas~GIG~~~a~~L~~~G-------~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~ 81 (311)
T 3o26_A 9 VTKRRCAVVTGGNKGIGFEICKQLSSNG-------IMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSL 81 (311)
T ss_dssp ---CCEEEESSCSSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHH
T ss_pred cCCCcEEEEecCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHH
Confidence 3345579999999999999999999998 79999999999998888877532234678899999998 888777
Q ss_pred Hh-------ccCeeEeccCCCC
Q 014694 86 CS-------QTKLLLNCVGPYR 100 (420)
Q Consensus 86 ~~-------~~dvVIn~aGp~~ 100 (420)
++ +.|+|||+||...
T Consensus 82 ~~~~~~~~g~iD~lv~nAg~~~ 103 (311)
T 3o26_A 82 ADFIKTHFGKLDILVNNAGVAG 103 (311)
T ss_dssp HHHHHHHHSSCCEEEECCCCCS
T ss_pred HHHHHHhCCCCCEEEECCcccc
Confidence 65 6899999999753
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=99.02 E-value=2e-09 Score=100.67 Aligned_cols=80 Identities=18% Similarity=0.171 Sum_probs=70.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~-- 88 (420)
..|+|+||+|++|+.++++|++++ ++|++.+|+.++++++.+++.. ..++.++.+|++|++++++++++
T Consensus 7 k~vlVtGasggiG~~~a~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~ 77 (251)
T 1zk4_A 7 KVAIITGGTLGIGLAIATKFVEEG-------AKVMITGRHSDVGEKAAKSVGT--PDQIQFFQHDSSDEDGWTKLFDATE 77 (251)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHCC--TTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred cEEEEeCCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhhc--cCceEEEECCCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 7999999999988888777742 24678899999999999998874
Q ss_pred -----cCeeEeccCCC
Q 014694 89 -----TKLLLNCVGPY 99 (420)
Q Consensus 89 -----~dvVIn~aGp~ 99 (420)
.|+|||+||..
T Consensus 78 ~~~~~id~li~~Ag~~ 93 (251)
T 1zk4_A 78 KAFGPVSTLVNNAGIA 93 (251)
T ss_dssp HHHSSCCEEEECCCCC
T ss_pred HHhCCCCEEEECCCCC
Confidence 89999999964
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.02 E-value=2e-09 Score=101.42 Aligned_cols=83 Identities=13% Similarity=0.152 Sum_probs=68.4
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCC------CCCccEEEEeCCCHHHHHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSH------SLSIPILTADTTDPPSLHR 84 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~------~~~~~~i~~D~~d~~sl~~ 84 (420)
..|+|+||+|++|+.++++|++++ ++|++.+|+.++++++.+++.... ..++.++.+|++|++++++
T Consensus 8 k~vlITGasggiG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 80 (264)
T 2pd6_A 8 ALALVTGAGSGIGRAVSVRLAGEG-------ATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARC 80 (264)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHH
Confidence 479999999999999999999998 799999999999888777653200 1457889999999999999
Q ss_pred HHhcc--------CeeEeccCCCC
Q 014694 85 LCSQT--------KLLLNCVGPYR 100 (420)
Q Consensus 85 ~~~~~--------dvVIn~aGp~~ 100 (420)
+++++ |+|||+||...
T Consensus 81 ~~~~~~~~~g~i~d~vi~~Ag~~~ 104 (264)
T 2pd6_A 81 LLEQVQACFSRPPSVVVSCAGITQ 104 (264)
T ss_dssp HHHHHHHHHSSCCSEEEECCCCCC
T ss_pred HHHHHHHHhCCCCeEEEECCCcCC
Confidence 88764 99999999653
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.02 E-value=2.7e-09 Score=99.30 Aligned_cols=78 Identities=14% Similarity=0.078 Sum_probs=67.9
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc-
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~- 88 (420)
.+.|+|+||+|++|++++++|++++ ++|++.+|+.++++++.+++ .+++++.+|++|++++++++++
T Consensus 7 ~~~vlVTGasggiG~~~a~~l~~~G-------~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~ 74 (244)
T 1cyd_A 7 GLRALVTGAGKGIGRDTVKALHASG-------AKVVAVTRTNSDLVSLAKEC-----PGIEPVCVDLGDWDATEKALGGI 74 (244)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHS-----TTCEEEECCTTCHHHHHHHHTTC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHhc-----cCCCcEEecCCCHHHHHHHHHHc
Confidence 3579999999999999999999998 79999999999887776654 2467789999999999999874
Q ss_pred --cCeeEeccCCC
Q 014694 89 --TKLLLNCVGPY 99 (420)
Q Consensus 89 --~dvVIn~aGp~ 99 (420)
.|+|||+||..
T Consensus 75 ~~id~vi~~Ag~~ 87 (244)
T 1cyd_A 75 GPVDLLVNNAALV 87 (244)
T ss_dssp CCCSEEEECCCCC
T ss_pred CCCCEEEECCccc
Confidence 79999999954
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.01 E-value=3.7e-09 Score=100.79 Aligned_cols=77 Identities=16% Similarity=0.160 Sum_probs=68.4
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|+||+.++++|++++ ++|++.+|+.++++++.+++. ++.++.+|++|+++++++++
T Consensus 10 k~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~Dv~d~~~v~~~~~~~~ 77 (270)
T 1yde_A 10 KVVVVTGGGRGIGAGIVRAFVNSG-------ARVVICDKDESGGRALEQELP-----GAVFILCDVTQEDDVKTLVSETI 77 (270)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHCT-----TEEEEECCTTSHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhc-----CCeEEEcCCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 799999999999888777653 46789999999999999887
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
+.|+|||+||..
T Consensus 78 ~~~g~iD~lv~nAg~~ 93 (270)
T 1yde_A 78 RRFGRLDCVVNNAGHH 93 (270)
T ss_dssp HHHSCCCEEEECCCCC
T ss_pred HHcCCCCEEEECCCCC
Confidence 679999999964
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.01 E-value=6.2e-10 Score=104.28 Aligned_cols=84 Identities=18% Similarity=0.095 Sum_probs=70.8
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
....|+|+||+|++|++++++|++++ ++|++.+|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 10 ~~~~vlVtGasggiG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~ 81 (255)
T 1fmc_A 10 DGKCAIITGAGAGIGKEIAITFATAG-------ASVVVSDINADAANHVVDEIQQ-LGGQAFACRCDITSEQELSALADF 81 (255)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHTTT-------CEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCC-------CEEEEEcCCHHHHHHHHHHHHH-hCCceEEEEcCCCCHHHHHHHHHH
Confidence 34579999999999999999999988 7999999999888777766531 12467788999999999999887
Q ss_pred ------ccCeeEeccCCCC
Q 014694 88 ------QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 82 ~~~~~~~~d~vi~~Ag~~~ 100 (255)
T 1fmc_A 82 AISKLGKVDILVNNAGGGG 100 (255)
T ss_dssp HHHHHSSCCEEEECCCCCC
T ss_pred HHHhcCCCCEEEECCCCCC
Confidence 7899999999643
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.01 E-value=4.8e-10 Score=110.36 Aligned_cols=103 Identities=17% Similarity=0.241 Sum_probs=78.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHh-CCCCCCCcceEEEEecCh--hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh
Q 014694 11 FDVIILGASGFTGKYVVREALKL-FNFPSSPIKSLALAGRNP--TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~-~~~~~~~~~~v~iagRs~--~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
|+|+|+|||||+|++++++|++. + ++|++.+|+. ++++.+ +++. ...++.++.+|++|++++.++++
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~g-------~~V~~~~r~~~~~~~~~~-~~~~--~~~~~~~~~~Dl~d~~~~~~~~~ 70 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNTQ-------DTVVNIDKLTYAGNLESL-SDIS--ESNRYNFEHADICDSAEITRIFE 70 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCS-------CEEEEEECCCTTCCGGGG-TTTT--TCTTEEEEECCTTCHHHHHHHHH
T ss_pred CEEEEECCCchHhHHHHHHHHhcCC-------CeEEEEecCCCCCchhhh-hhhh--cCCCeEEEECCCCCHHHHHHHHh
Confidence 47999999999999999999997 4 7899999864 222222 1221 12467889999999999999998
Q ss_pred --ccCeeEeccCCCCCC----------------cHHHHHHHHHc--CC--------cEEecCCc
Q 014694 88 --QTKLLLNCVGPYRLH----------------GDPVAAACVHS--GC--------DYLDISGE 123 (420)
Q Consensus 88 --~~dvVIn~aGp~~~~----------------~~~vv~Ac~~~--g~--------~yvdisge 123 (420)
++|+||||||..... ..+++++|.+. ++ ++|.+|..
T Consensus 71 ~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~ 134 (361)
T 1kew_A 71 QYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTD 134 (361)
T ss_dssp HHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEG
T ss_pred hcCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCH
Confidence 899999999975410 25778888887 64 67777643
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.00 E-value=1.4e-09 Score=102.55 Aligned_cols=79 Identities=15% Similarity=0.072 Sum_probs=69.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~-- 88 (420)
..++|+||+|+||+.++++|++++ .+|++.+|+.++++++.++++ .++.++.+|++|++++++++++
T Consensus 7 k~vlVTGas~giG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~ 75 (253)
T 1hxh_A 7 KVALVTGGASGVGLEVVKLLLGEG-------AKVAFSDINEAAGQQLAAELG----ERSMFVRHDVSSEADWTLVMAAVQ 75 (253)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT-------CEEEEECSCHHHHHHHHHHHC----TTEEEECCCTTCHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHcC----CceEEEEccCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 799999999999988877763 3677889999999999988875
Q ss_pred -----cCeeEeccCCCC
Q 014694 89 -----TKLLLNCVGPYR 100 (420)
Q Consensus 89 -----~dvVIn~aGp~~ 100 (420)
.|+|||+||...
T Consensus 76 ~~~g~id~lv~~Ag~~~ 92 (253)
T 1hxh_A 76 RRLGTLNVLVNNAGILL 92 (253)
T ss_dssp HHHCSCCEEEECCCCCC
T ss_pred HHcCCCCEEEECCCCCC
Confidence 599999999653
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=99.00 E-value=3.3e-09 Score=101.03 Aligned_cols=80 Identities=20% Similarity=0.248 Sum_probs=70.9
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
...++|+||+|+||+.++++|++++ .+|++.+|+.++++++.++++ .++.++.+|++|+++++++++
T Consensus 27 gk~vlVTGas~gIG~aia~~la~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~ 95 (266)
T 3grp_A 27 GRKALVTGATGGIGEAIARCFHAQG-------AIVGLHGTREDKLKEIAADLG----KDVFVFSANLSDRKSIKQLAEVA 95 (266)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHC----SSEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhC----CceEEEEeecCCHHHHHHHHHHH
Confidence 3479999999999999999999998 799999999999988888774 467889999999999999887
Q ss_pred -----ccCeeEeccCCCC
Q 014694 88 -----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 96 ~~~~g~iD~lvnnAg~~~ 113 (266)
T 3grp_A 96 EREMEGIDILVNNAGITR 113 (266)
T ss_dssp HHHHTSCCEEEECCCCC-
T ss_pred HHHcCCCCEEEECCCCCC
Confidence 6899999999653
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.00 E-value=4.2e-09 Score=99.56 Aligned_cols=82 Identities=18% Similarity=0.191 Sum_probs=69.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~-~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..++|+||+|+||+.++++|++++ .+|++.+|+.++++++.+++... ...++.++.+|++|+++++++++
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 80 (260)
T 2z1n_A 8 KLAVVTAGSSGLGFASALELARNG-------ARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKA 80 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHH
Confidence 479999999999999999999998 79999999999888777665310 01267789999999999999887
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
+.|+|||+||..
T Consensus 81 ~~~~gid~lv~~Ag~~ 96 (260)
T 2z1n_A 81 RDLGGADILVYSTGGP 96 (260)
T ss_dssp HHTTCCSEEEECCCCC
T ss_pred HHhcCCCEEEECCCCC
Confidence 589999999954
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=99.00 E-value=1.3e-09 Score=102.99 Aligned_cols=82 Identities=18% Similarity=0.193 Sum_probs=69.4
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH---
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC--- 86 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~--- 86 (420)
...++|+||+|+||+.++++|++++ ++|++.+|+.++++++.+++.. ...++.++.+|++|++++++++
T Consensus 9 ~k~vlVTGas~giG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (260)
T 2ae2_A 9 GCTALVTGGSRGIGYGIVEELASLG-------ASVYTCSRNQKELNDCLTQWRS-KGFKVEASVCDLSSRSERQELMNTV 80 (260)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHH-TTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 3479999999999999999999998 7999999999988877766531 1235778899999999999887
Q ss_pred -----hccCeeEeccCCC
Q 014694 87 -----SQTKLLLNCVGPY 99 (420)
Q Consensus 87 -----~~~dvVIn~aGp~ 99 (420)
.+.|+|||+||..
T Consensus 81 ~~~~~g~id~lv~~Ag~~ 98 (260)
T 2ae2_A 81 ANHFHGKLNILVNNAGIV 98 (260)
T ss_dssp HHHTTTCCCEEEECCCCC
T ss_pred HHHcCCCCCEEEECCCCC
Confidence 4689999999964
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.00 E-value=4.6e-09 Score=100.92 Aligned_cols=81 Identities=16% Similarity=0.098 Sum_probs=71.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|+||+.++++|++++ .+|++.+|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G-------~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~ 100 (283)
T 3v8b_A 29 PVALITGAGSGIGRATALALAADG-------VTVGALGRTRTEVEEVADEIVG-AGGQAIALEADVSDELQMRNAVRDLV 100 (283)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTT-------CEEEEEESSHHHHHHHHHHHTT-TTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 469999999999999999999998 8999999999999998888753 23467889999999999999887
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
+.|+|||+||..
T Consensus 101 ~~~g~iD~lVnnAg~~ 116 (283)
T 3v8b_A 101 LKFGHLDIVVANAGIN 116 (283)
T ss_dssp HHHSCCCEEEECCCCC
T ss_pred HHhCCCCEEEECCCCC
Confidence 689999999964
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=98.99 E-value=3.3e-10 Score=107.24 Aligned_cols=96 Identities=17% Similarity=0.135 Sum_probs=77.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
++|+|+|||||+|++++++|++++ ++|++.+|+.++. + ..++.++.+|++|++++.++++++|
T Consensus 3 ~~ilVtGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~------~----~~~~~~~~~Dl~d~~~~~~~~~~~d 65 (267)
T 3ay3_A 3 NRLLVTGAAGGVGSAIRPHLGTLA-------HEVRLSDIVDLGA------A----EAHEEIVACDLADAQAVHDLVKDCD 65 (267)
T ss_dssp EEEEEESTTSHHHHHHGGGGGGTE-------EEEEECCSSCCCC------C----CTTEEECCCCTTCHHHHHHHHTTCS
T ss_pred ceEEEECCCCHHHHHHHHHHHhCC-------CEEEEEeCCCccc------c----CCCccEEEccCCCHHHHHHHHcCCC
Confidence 379999999999999999999987 8999999987542 1 1346788899999999999999999
Q ss_pred eeEeccCCCCCC------------cHHHHHHHHHcCC-cEEecCCc
Q 014694 91 LLLNCVGPYRLH------------GDPVAAACVHSGC-DYLDISGE 123 (420)
Q Consensus 91 vVIn~aGp~~~~------------~~~vv~Ac~~~g~-~yvdisge 123 (420)
+|||++|+.... ..+++++|.++++ ++|.+|..
T Consensus 66 ~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~ 111 (267)
T 3ay3_A 66 GIIHLGGVSVERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSN 111 (267)
T ss_dssp EEEECCSCCSCCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEG
T ss_pred EEEECCcCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCH
Confidence 999999975321 1578888888876 67776643
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=1.8e-09 Score=105.35 Aligned_cols=101 Identities=10% Similarity=0.137 Sum_probs=74.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh----hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP----TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~----~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
|+|+|+|||||||++++++|++++ ++|++.+|.. +.++.+.+.. ..++.++.+|++|++++.+++
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G-------~~V~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~ 69 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQNG-------HDVIILDNLCNSKRSVLPVIERLG----GKHPTFVEGDIRNEALMTEIL 69 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEECCSSCCTTHHHHHHHHH----TSCCEEEECCTTCHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEecCCCcchhHHHHHHhhc----CCcceEEEccCCCHHHHHHHh
Confidence 479999999999999999999987 7888887642 2233222211 235778999999999999998
Q ss_pred hc--cCeeEeccCCCCCC----------------cHHHHHHHHHcCC-cEEecCC
Q 014694 87 SQ--TKLLLNCVGPYRLH----------------GDPVAAACVHSGC-DYLDISG 122 (420)
Q Consensus 87 ~~--~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~-~yvdisg 122 (420)
++ +|+|||+||..... ..+++++|.++++ ++|.+|.
T Consensus 70 ~~~~~D~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 124 (338)
T 1udb_A 70 HDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSS 124 (338)
T ss_dssp HHTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred hccCCCEEEECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcc
Confidence 74 89999999964310 1456777777776 5666654
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=3.4e-10 Score=109.13 Aligned_cols=97 Identities=12% Similarity=0.153 Sum_probs=77.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
|+|+|+|||||+|++++++|++++ ++|.+.+|+.++..... ..++.++.+|+.|.+ +.+++++ |
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~-------~~~~~~~~~Dl~d~~-~~~~~~~-d 64 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELG-------YEVVVVDNLSSGRREFV-------NPSAELHVRDLKDYS-WGAGIKG-D 64 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEECCCSSCCGGGS-------CTTSEEECCCTTSTT-TTTTCCC-S
T ss_pred CEEEEECCCChHHHHHHHHHHhCC-------CEEEEEeCCCCCchhhc-------CCCceEEECccccHH-HHhhcCC-C
Confidence 579999999999999999999987 79999999876542211 246788999999988 8888888 9
Q ss_pred eeEeccCCCCCC----------------cHHHHHHHHHcCC-cEEecCCc
Q 014694 91 LLLNCVGPYRLH----------------GDPVAAACVHSGC-DYLDISGE 123 (420)
Q Consensus 91 vVIn~aGp~~~~----------------~~~vv~Ac~~~g~-~yvdisge 123 (420)
+|||+||..... ..+++++|.+.++ ++|.+|..
T Consensus 65 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~ 114 (312)
T 3ko8_A 65 VVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSS 114 (312)
T ss_dssp EEEECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEG
T ss_pred EEEECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcH
Confidence 999999953211 1578899999887 67777753
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=3.5e-09 Score=99.44 Aligned_cols=81 Identities=19% Similarity=0.195 Sum_probs=69.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|+||+.++++|++++ ++|++.+|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 8 k~~lVTGas~gIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dv~~~~~~~~~~~~~~ 79 (247)
T 2jah_A 8 KVALITGASSGIGEATARALAAEG-------AAVAIAARRVEKLRALGDELTA-AGAKVHVLELDVADRQGVDAAVASTV 79 (247)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHh-cCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 7999999999998887776631 12467789999999999998876
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
+.|+|||+||..
T Consensus 80 ~~~g~id~lv~nAg~~ 95 (247)
T 2jah_A 80 EALGGLDILVNNAGIM 95 (247)
T ss_dssp HHHSCCSEEEECCCCC
T ss_pred HHcCCCCEEEECCCCC
Confidence 689999999964
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.99 E-value=1.6e-09 Score=102.48 Aligned_cols=83 Identities=12% Similarity=0.032 Sum_probs=69.3
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEec-ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagR-s~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
...|+|+||+|++|++++++|++++ ++|++.+| +.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 21 ~k~vlItGasggiG~~la~~l~~~G-------~~v~~~~r~~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~ 92 (274)
T 1ja9_A 21 GKVALTTGAGRGIGRGIAIELGRRG-------ASVVVNYGSSSKAAEEVVAELKK-LGAQGVAIQADISKPSEVVALFDK 92 (274)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTT-------CEEEEEESSCHHHHHHHHHHHHH-TTCCEEEEECCTTSHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEcCCchHHHHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHH
Confidence 3579999999999999999999998 78999999 88887776665531 12457789999999999999887
Q ss_pred ------ccCeeEeccCCCC
Q 014694 88 ------QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 93 ~~~~~~~~d~vi~~Ag~~~ 111 (274)
T 1ja9_A 93 AVSHFGGLDFVMSNSGMEV 111 (274)
T ss_dssp HHHHHSCEEEEECCCCCCC
T ss_pred HHHHcCCCCEEEECCCCCC
Confidence 7899999999653
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.99 E-value=2.6e-09 Score=101.29 Aligned_cols=84 Identities=17% Similarity=0.097 Sum_probs=70.0
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHhc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~-~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
...++|+||+|+||++++++|++++ ++|++.+|+.++++++.+++... ...++.++.+|++|++++++++++
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 79 (267)
T 2gdz_A 7 GKVALVTGAAQGIGRAFAEALLLKG-------AKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRK 79 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHH
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHH
Confidence 3479999999999999999999998 79999999999888777766421 123467889999999999998874
Q ss_pred -------cCeeEeccCCCC
Q 014694 89 -------TKLLLNCVGPYR 100 (420)
Q Consensus 89 -------~dvVIn~aGp~~ 100 (420)
.|+|||+||...
T Consensus 80 ~~~~~g~id~lv~~Ag~~~ 98 (267)
T 2gdz_A 80 VVDHFGRLDILVNNAGVNN 98 (267)
T ss_dssp HHHHHSCCCEEEECCCCCC
T ss_pred HHHHcCCCCEEEECCCCCC
Confidence 699999999753
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=98.99 E-value=4.3e-10 Score=108.83 Aligned_cols=103 Identities=21% Similarity=0.307 Sum_probs=72.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEec-ChhH---HHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-NPTR---VKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagR-s~~k---l~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
.+|+|||||||||++++++|++++ ++|.+..| +.++ .+.+ .++.. ...++.++.+|++|++++++++
T Consensus 2 k~vlVTGatG~iG~~l~~~L~~~G-------~~V~~~~r~~~~~~~~~~~~-~~~~~-~~~~~~~~~~Dl~d~~~~~~~~ 72 (322)
T 2p4h_X 2 GRVCVTGGTGFLGSWIIKSLLENG-------YSVNTTIRADPERKRDVSFL-TNLPG-ASEKLHFFNADLSNPDSFAAAI 72 (322)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-------CEEEEECCCC----CCCHHH-HTSTT-HHHHEEECCCCTTCGGGGHHHH
T ss_pred CEEEEECChhHHHHHHHHHHHHCC-------CEEEEEEeCCccchhHHHHH-Hhhhc-cCCceEEEecCCCCHHHHHHHH
Confidence 369999999999999999999987 78998888 6533 2222 11110 0013567889999999999999
Q ss_pred hccCeeEeccCCCCCC---------------cHHHHHHHHHc-CC-cEEecCC
Q 014694 87 SQTKLLLNCVGPYRLH---------------GDPVAAACVHS-GC-DYLDISG 122 (420)
Q Consensus 87 ~~~dvVIn~aGp~~~~---------------~~~vv~Ac~~~-g~-~yvdisg 122 (420)
+++|+|||+|++.... ..+++++|.+. ++ ++|.+|.
T Consensus 73 ~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS 125 (322)
T 2p4h_X 73 EGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSS 125 (322)
T ss_dssp TTCSEEEECCCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEE
T ss_pred cCCCEEEEcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecc
Confidence 9999999999864211 14566777776 55 5666654
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=98.99 E-value=3.4e-09 Score=98.20 Aligned_cols=78 Identities=18% Similarity=0.159 Sum_probs=70.1
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc--
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT-- 89 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~-- 89 (420)
.++|+||+|++|+.++++|++++ .+|++.+|+.++++++.+++. .++.++.+|++|+++++++++++
T Consensus 3 ~vlVTGas~gIG~~~a~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~~ 71 (230)
T 3guy_A 3 LIVITGASSGLGAELAKLYDAEG-------KATYLTGRSESKLSTVTNCLS----NNVGYRARDLASHQEVEQLFEQLDS 71 (230)
T ss_dssp CEEEESTTSHHHHHHHHHHHHTT-------CCEEEEESCHHHHHHHHHTCS----SCCCEEECCTTCHHHHHHHHHSCSS
T ss_pred EEEEecCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHh----hccCeEeecCCCHHHHHHHHHHHhh
Confidence 59999999999999999999998 789999999999988888763 46889999999999999999876
Q ss_pred --CeeEeccCCCC
Q 014694 90 --KLLLNCVGPYR 100 (420)
Q Consensus 90 --dvVIn~aGp~~ 100 (420)
|+|||+||...
T Consensus 72 ~~d~lv~~Ag~~~ 84 (230)
T 3guy_A 72 IPSTVVHSAGSGY 84 (230)
T ss_dssp CCSEEEECCCCCC
T ss_pred cCCEEEEeCCcCC
Confidence 89999999643
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=98.99 E-value=1.6e-09 Score=103.84 Aligned_cols=86 Identities=16% Similarity=0.140 Sum_probs=71.6
Q ss_pred CCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 014694 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 7 ~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
+.+...++|+||+|+||+.++++|++++ .+|++.+|+.++++++.+++.. ...++.++.+|++|++++++++
T Consensus 21 m~~~k~~lVTGas~GIG~aia~~la~~G-------~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dv~d~~~v~~~~ 92 (279)
T 3sju_A 21 MSRPQTAFVTGVSSGIGLAVARTLAARG-------IAVYGCARDAKNVSAAVDGLRA-AGHDVDGSSCDVTSTDEVHAAV 92 (279)
T ss_dssp ----CEEEEESTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHT-TTCCEEEEECCTTCHHHHHHHH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEECCCCCHHHHHHHH
Confidence 3344579999999999999999999998 7999999999999888887742 2356788999999999999888
Q ss_pred h-------ccCeeEeccCCCC
Q 014694 87 S-------QTKLLLNCVGPYR 100 (420)
Q Consensus 87 ~-------~~dvVIn~aGp~~ 100 (420)
+ +.|+|||+||...
T Consensus 93 ~~~~~~~g~id~lv~nAg~~~ 113 (279)
T 3sju_A 93 AAAVERFGPIGILVNSAGRNG 113 (279)
T ss_dssp HHHHHHHCSCCEEEECCCCCC
T ss_pred HHHHHHcCCCcEEEECCCCCC
Confidence 6 5799999999654
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=98.98 E-value=3.4e-09 Score=99.32 Aligned_cols=82 Identities=15% Similarity=0.170 Sum_probs=69.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEec-ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagR-s~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..++|+||+|+||+.++++|++++ ++|++.+| +.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 5 k~vlVTGas~giG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 76 (246)
T 2uvd_A 5 KVALVTGASRGIGRAIAIDLAKQG-------ANVVVNYAGNEQKANEVVDEIKK-LGSDAIAVRADVANAEDVTNMVKQT 76 (246)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTT-------CEEEEEESSCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCCCHHHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 479999999999999999999998 79999999 88888777666531 12457789999999999999887
Q ss_pred -----ccCeeEeccCCCC
Q 014694 88 -----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 77 ~~~~g~id~lv~nAg~~~ 94 (246)
T 2uvd_A 77 VDVFGQVDILVNNAGVTK 94 (246)
T ss_dssp HHHHSCCCEEEECCCCCC
T ss_pred HHHcCCCCEEEECCCCCC
Confidence 6899999999653
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.98 E-value=2.9e-09 Score=100.99 Aligned_cols=81 Identities=19% Similarity=0.190 Sum_probs=70.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|+||+.+++.|++++ .+|++.+|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~ 83 (264)
T 3ucx_A 12 KVVVISGVGPALGTTLARRCAEQG-------ADLVLAARTVERLEDVAKQVTD-TGRRALSVGTDITDDAQVAHLVDETM 83 (264)
T ss_dssp CEEEEESCCTTHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred cEEEEECCCcHHHHHHHHHHHHCc-------CEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 8999999999999888777642 23467889999999999999887
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
+.|+|||+||..
T Consensus 84 ~~~g~id~lv~nAg~~ 99 (264)
T 3ucx_A 84 KAYGRVDVVINNAFRV 99 (264)
T ss_dssp HHTSCCSEEEECCCSC
T ss_pred HHcCCCcEEEECCCCC
Confidence 579999999864
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.98 E-value=3.5e-09 Score=100.64 Aligned_cols=79 Identities=15% Similarity=0.166 Sum_probs=69.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~-- 88 (420)
..++|+||+|+||+.++++|++++ ++|++.+|+.++++++.+++. .++.++.+|++|++++++++++
T Consensus 7 k~vlITGas~gIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~ 75 (263)
T 2a4k_A 7 KTILVTGAASGIGRAALDLFAREG-------ASLVAVDREERLLAEAVAALE----AEAIAVVADVSDPKAVEAVFAEAL 75 (263)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHTCC----SSEEEEECCTTSHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhc----CceEEEEcCCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 799999999999988877663 4577899999999999998874
Q ss_pred -----cCeeEeccCCCC
Q 014694 89 -----TKLLLNCVGPYR 100 (420)
Q Consensus 89 -----~dvVIn~aGp~~ 100 (420)
.|+|||+||...
T Consensus 76 ~~~g~iD~lvnnAg~~~ 92 (263)
T 2a4k_A 76 EEFGRLHGVAHFAGVAH 92 (263)
T ss_dssp HHHSCCCEEEEGGGGTT
T ss_pred HHcCCCcEEEECCCCCC
Confidence 699999999653
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=98.98 E-value=4.7e-09 Score=97.75 Aligned_cols=78 Identities=17% Similarity=0.120 Sum_probs=68.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..|+|+||+|++|++++++|++++ ++|++.+|+.++++++.+++. +..++.+|++|+++++++++
T Consensus 8 k~vlITGasggiG~~~a~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~ 75 (244)
T 3d3w_A 8 RRVLVTGAGKGIGRGTVQALHATG-------ARVVAVSRTQADLDSLVRECP-----GIEPVCVDLGDWEATERALGSVG 75 (244)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHST-----TCEEEECCTTCHHHHHHHHTTCC
T ss_pred cEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHcC-----CCCEEEEeCCCHHHHHHHHHHcC
Confidence 479999999999999999999988 799999999999887776652 45778999999999999987
Q ss_pred ccCeeEeccCCCC
Q 014694 88 QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 76 ~id~vi~~Ag~~~ 88 (244)
T 3d3w_A 76 PVDLLVNNAAVAL 88 (244)
T ss_dssp CCCEEEECCCCCC
T ss_pred CCCEEEECCccCC
Confidence 4799999999643
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=98.98 E-value=9.3e-10 Score=102.20 Aligned_cols=82 Identities=17% Similarity=0.178 Sum_probs=69.8
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh----
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~---- 87 (420)
.++|+||+|++|+.++++|++++ ++|++.+|+.++++++.+++......++.++.+|++|+++++++++
T Consensus 4 ~vlITGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 76 (235)
T 3l77_A 4 VAVITGASRGIGEAIARALARDG-------YALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLE 76 (235)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHH
Confidence 69999999999999999999998 7899999999998887766521113467889999999999999887
Q ss_pred ---ccCeeEeccCCCC
Q 014694 88 ---QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ---~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 77 ~~g~id~li~~Ag~~~ 92 (235)
T 3l77_A 77 RFGDVDVVVANAGLGY 92 (235)
T ss_dssp HHSSCSEEEECCCCCC
T ss_pred hcCCCCEEEECCcccc
Confidence 6799999999653
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=98.98 E-value=1.8e-09 Score=101.98 Aligned_cols=81 Identities=19% Similarity=0.200 Sum_probs=71.4
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|+||+.++++|++++ .+|++.+|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 7 k~vlVTGas~gIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~ 78 (257)
T 3imf_A 7 KVVIITGGSSGMGKGMATRFAKEG-------ARVVITGRTKEKLEEAKLEIEQ-FPGQILTVQMDVRNTDDIQKMIEQID 78 (257)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHCC-STTCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 7999999999999998888753 23467889999999999999887
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
+.|+|||+||..
T Consensus 79 ~~~g~id~lv~nAg~~ 94 (257)
T 3imf_A 79 EKFGRIDILINNAAGN 94 (257)
T ss_dssp HHHSCCCEEEECCCCC
T ss_pred HHcCCCCEEEECCCCC
Confidence 679999999954
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=98.98 E-value=9.7e-10 Score=103.67 Aligned_cols=82 Identities=23% Similarity=0.270 Sum_probs=70.0
Q ss_pred cceEEEEcCCcHHHHHHHHHHHH-hCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 10 LFDVIILGASGFTGKYVVREALK-LFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~-~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
...|+|+||+|+||++++++|++ .+ .+|++++|+.++++++.+++.. ...++.++.+|++|.++++++++
T Consensus 4 ~k~vlITGasggIG~~~a~~L~~~~g-------~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~~~~~~~~ 75 (276)
T 1wma_A 4 IHVALVTGGNKGIGLAIVRDLCRLFS-------GDVVLTARDVTRGQAAVQQLQA-EGLSPRFHQLDIDDLQSIRALRDF 75 (276)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHHSS-------SEEEEEESSHHHHHHHHHHHHH-TTCCCEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHhcC-------CeEEEEeCChHHHHHHHHHHHh-cCCeeEEEECCCCCHHHHHHHHHH
Confidence 45799999999999999999999 77 7999999999888777766531 12467889999999999999887
Q ss_pred ------ccCeeEeccCCC
Q 014694 88 ------QTKLLLNCVGPY 99 (420)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (420)
+.|+|||+||..
T Consensus 76 ~~~~~g~id~li~~Ag~~ 93 (276)
T 1wma_A 76 LRKEYGGLDVLVNNAGIA 93 (276)
T ss_dssp HHHHHSSEEEEEECCCCC
T ss_pred HHHhcCCCCEEEECCccc
Confidence 789999999964
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=98.98 E-value=2.3e-09 Score=110.65 Aligned_cols=111 Identities=19% Similarity=0.288 Sum_probs=83.3
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHH---HHHHHhCC-----------CCCCCccEEEE
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVK---QALQWASP-----------SHSLSIPILTA 74 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~---~~~~~l~~-----------~~~~~~~~i~~ 74 (420)
+.++|+|+|||||+|++++++|++..+. ..+|++.+|+.++.+ ++.+.+.. ....++.++.+
T Consensus 72 ~~~~VLVTGatG~IG~~l~~~Ll~~~~~----g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~ 147 (478)
T 4dqv_A 72 ELRTVLLTGATGFLGRYLVLELLRRLDV----DGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAG 147 (478)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHHSCT----TCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEEC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhcCCC----CCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEe
Confidence 4568999999999999999999998310 179999999865432 22222210 00247889999
Q ss_pred eCC------CHHHHHHHHhccCeeEeccCCCCCC------------cHHHHHHHHHcCC-cEEecCCc
Q 014694 75 DTT------DPPSLHRLCSQTKLLLNCVGPYRLH------------GDPVAAACVHSGC-DYLDISGE 123 (420)
Q Consensus 75 D~~------d~~sl~~~~~~~dvVIn~aGp~~~~------------~~~vv~Ac~~~g~-~yvdisge 123 (420)
|++ |.+++.++++++|+||||||..... ..+++++|.+.++ ++|.+|..
T Consensus 148 Dl~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~ 215 (478)
T 4dqv_A 148 DKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTA 215 (478)
T ss_dssp CTTSGGGGCCHHHHHHHHHHCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEG
T ss_pred ECCCcccCCCHHHHHHHHcCCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeeh
Confidence 998 7778999999999999999975431 2678999999887 68877753
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=98.98 E-value=2.8e-09 Score=100.99 Aligned_cols=81 Identities=15% Similarity=0.141 Sum_probs=70.0
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc-
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~- 88 (420)
...++|+||+|+||+.++++|++++ .+|++.+|+.++++++.+++.. ...++.++.+|++|++++.+++++
T Consensus 29 ~k~vlITGas~gIG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~ 100 (262)
T 3rkr_A 29 GQVAVVTGASRGIGAAIARKLGSLG-------ARVVLTARDVEKLRAVEREIVA-AGGEAESHACDLSHSDAIAAFATGV 100 (262)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHH-TTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHH-hCCceeEEEecCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 7999999999998888776632 234678899999999999998864
Q ss_pred ------cCeeEeccCC
Q 014694 89 ------TKLLLNCVGP 98 (420)
Q Consensus 89 ------~dvVIn~aGp 98 (420)
.|+|||+||.
T Consensus 101 ~~~~g~id~lv~~Ag~ 116 (262)
T 3rkr_A 101 LAAHGRCDVLVNNAGV 116 (262)
T ss_dssp HHHHSCCSEEEECCCC
T ss_pred HHhcCCCCEEEECCCc
Confidence 7999999996
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=98.98 E-value=1.7e-09 Score=102.29 Aligned_cols=83 Identities=14% Similarity=0.053 Sum_probs=71.4
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
...++|+||+|+||+.++++|++++ .+|++.+|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 12 ~k~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~ 83 (256)
T 3gaf_A 12 DAVAIVTGAAAGIGRAIAGTFAKAG-------ASVVVTDLKSEGAEAVAAAIRQ-AGGKAIGLECNVTDEQHREAVIKAA 83 (256)
T ss_dssp TCEEEECSCSSHHHHHHHHHHHHHT-------CEEEEEESSHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEECCCCCHHHHHHHHHHH
Confidence 3479999999999999999999998 7999999999998888776632 23567889999999999999887
Q ss_pred -----ccCeeEeccCCCC
Q 014694 88 -----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 84 ~~~~g~id~lv~nAg~~~ 101 (256)
T 3gaf_A 84 LDQFGKITVLVNNAGGGG 101 (256)
T ss_dssp HHHHSCCCEEEECCCCCC
T ss_pred HHHcCCCCEEEECCCCCC
Confidence 6899999999653
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.98 E-value=7.8e-10 Score=107.77 Aligned_cols=106 Identities=9% Similarity=0.119 Sum_probs=79.3
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh--HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT--RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~--kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
.|+|+|+|||||+|++++++|++++. .++|++.+|+.. +.+.+ +++. ...++.++.+|++|++++++++.
T Consensus 3 ~m~vlVTGatG~iG~~l~~~L~~~g~-----~~~V~~~~r~~~~~~~~~~-~~~~--~~~~~~~~~~Dl~d~~~~~~~~~ 74 (336)
T 2hun_A 3 SMKLLVTGGMGFIGSNFIRYILEKHP-----DWEVINIDKLGYGSNPANL-KDLE--DDPRYTFVKGDVADYELVKELVR 74 (336)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCT-----TCEEEEEECCCTTCCGGGG-TTTT--TCTTEEEEECCTTCHHHHHHHHH
T ss_pred CCeEEEECCCchHHHHHHHHHHHhCC-----CCEEEEEecCcccCchhHH-hhhc--cCCceEEEEcCCCCHHHHHHHhh
Confidence 36899999999999999999999862 178999998642 22211 1121 12467889999999999999999
Q ss_pred ccCeeEeccCCCCCC----------------cHHHHHHHHHcCC--cEEecCCc
Q 014694 88 QTKLLLNCVGPYRLH----------------GDPVAAACVHSGC--DYLDISGE 123 (420)
Q Consensus 88 ~~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~--~yvdisge 123 (420)
++|+||||||..... ..+++++|.+.+. ++|.+|..
T Consensus 75 ~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~ 128 (336)
T 2hun_A 75 KVDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTD 128 (336)
T ss_dssp TCSEEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEG
T ss_pred CCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccH
Confidence 999999999975310 1577888888764 67777643
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=98.98 E-value=1.5e-09 Score=104.04 Aligned_cols=83 Identities=17% Similarity=0.099 Sum_probs=71.8
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
...++|+||+|+||+.++++|++++ .+|++.+|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 32 gk~~lVTGas~GIG~aia~~la~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~v~~~~~~~ 103 (276)
T 3r1i_A 32 GKRALITGASTGIGKKVALAYAEAG-------AQVAVAARHSDALQVVADEIAG-VGGKALPIRCDVTQPDQVRGMLDQM 103 (276)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTT-------CEEEEEESSGGGGHHHHHHHHH-TTCCCEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 3479999999999999999999998 7999999999998888776632 23467889999999999999987
Q ss_pred -----ccCeeEeccCCCC
Q 014694 88 -----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 104 ~~~~g~iD~lvnnAg~~~ 121 (276)
T 3r1i_A 104 TGELGGIDIAVCNAGIVS 121 (276)
T ss_dssp HHHHSCCSEEEECCCCCC
T ss_pred HHHcCCCCEEEECCCCCC
Confidence 6899999999754
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=98.97 E-value=2.7e-09 Score=100.44 Aligned_cols=82 Identities=16% Similarity=0.094 Sum_probs=68.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEec-ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagR-s~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..|+|+||+|++|++++++|++++ ++|++.+| +.++++++.+++.. ...++.++.+|++|++++.++++
T Consensus 8 k~vlITGasggiG~~~a~~l~~~G-------~~V~~~~r~~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 79 (261)
T 1gee_A 8 KVVVITGSSTGLGKSMAIRFATEK-------AKVVVNYRSKEDEANSVLEEIKK-VGGEAIAVKGDVTVESDVINLVQSA 79 (261)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTT-------CEEEEEESSCHHHHHHHHHHHHH-TTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCC-------CEEEEEcCCChHHHHHHHHHHHh-cCCceEEEECCCCCHHHHHHHHHHH
Confidence 479999999999999999999998 78999999 88887777665531 12356789999999999999887
Q ss_pred -----ccCeeEeccCCCC
Q 014694 88 -----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 80 ~~~~g~id~li~~Ag~~~ 97 (261)
T 1gee_A 80 IKEFGKLDVMINNAGLEN 97 (261)
T ss_dssp HHHHSCCCEEEECCCCCC
T ss_pred HHHcCCCCEEEECCCCCC
Confidence 6899999999643
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=98.97 E-value=1.1e-09 Score=106.73 Aligned_cols=108 Identities=14% Similarity=0.218 Sum_probs=78.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHh-CCCCCCCcceEEEEecChh--HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh
Q 014694 11 FDVIILGASGFTGKYVVREALKL-FNFPSSPIKSLALAGRNPT--RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~-~~~~~~~~~~v~iagRs~~--kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
|+|+|+|||||+|++++++|+++ ++.. ..++|++.+|+.. ..+.+ +.+. ...++.++.+|++|++++.+++.
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~--~~~~V~~~~r~~~~~~~~~~-~~~~--~~~~~~~~~~Dl~d~~~~~~~~~ 75 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDV--PADEVIVLDSLTYAGNRANL-APVD--ADPRLRFVHGDIRDAGLLARELR 75 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTS--CCSEEEEEECCCTTCCGGGG-GGGT--TCTTEEEEECCTTCHHHHHHHTT
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCC--CceEEEEEECCCccCchhhh-hhcc--cCCCeEEEEcCCCCHHHHHHHhc
Confidence 57999999999999999999995 3100 0058888898642 11111 1221 12467889999999999999999
Q ss_pred ccCeeEeccCCCCCC----------------cHHHHHHHHHcCC-cEEecCCc
Q 014694 88 QTKLLLNCVGPYRLH----------------GDPVAAACVHSGC-DYLDISGE 123 (420)
Q Consensus 88 ~~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~-~yvdisge 123 (420)
++|+||||||..... ..+++++|.+.++ ++|.+|..
T Consensus 76 ~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~ 128 (337)
T 1r6d_A 76 GVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTN 128 (337)
T ss_dssp TCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEG
T ss_pred CCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecch
Confidence 999999999975310 2678899999887 67777653
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=98.97 E-value=4.4e-10 Score=113.88 Aligned_cols=107 Identities=12% Similarity=0.086 Sum_probs=76.5
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh---HHHHHHHHhCC--------CCCCCccEEEEeCC
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT---RVKQALQWASP--------SHSLSIPILTADTT 77 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~---kl~~~~~~l~~--------~~~~~~~~i~~D~~ 77 (420)
..++|+|+|||||||++++++|++.+ .+|++++|+.+ .++.+.+.+.. ....++.++.+|++
T Consensus 68 ~~~~vlVTGatG~iG~~l~~~L~~~g-------~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~ 140 (427)
T 4f6c_A 68 PLGNTLLTGATGFLGAYLIEALQGYS-------HRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFE 140 (427)
T ss_dssp CCEEEEEECTTSHHHHHHHHHHTTTE-------EEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC-
T ss_pred CCCEEEEecCCcHHHHHHHHHHHcCC-------CEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCC
Confidence 44589999999999999999997766 89999999876 33333222210 01247889999999
Q ss_pred CHHHHHHHHhccCeeEeccCCCCCC-------------cHHHHHHHHHcCCcEEecCCc
Q 014694 78 DPPSLHRLCSQTKLLLNCVGPYRLH-------------GDPVAAACVHSGCDYLDISGE 123 (420)
Q Consensus 78 d~~sl~~~~~~~dvVIn~aGp~~~~-------------~~~vv~Ac~~~g~~yvdisge 123 (420)
|++++. .+.++|+||||||+.... ..+++++|.+.+.++|.+|..
T Consensus 141 d~~~l~-~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~~~~~~v~~SS~ 198 (427)
T 4f6c_A 141 CMDDVV-LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTI 198 (427)
T ss_dssp --CCCC-CSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHHTTCEEEEEEEG
T ss_pred CcccCC-CcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCcEEEECch
Confidence 988888 777899999999976421 167889998855577777643
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=98.97 E-value=1.5e-09 Score=104.51 Aligned_cols=79 Identities=22% Similarity=0.240 Sum_probs=70.4
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
...++|+||+|+||++++++|++++ .+|++++|+.++++++.+++. .++.++.+|++|.++++++++
T Consensus 16 gk~vlVTGas~gIG~~~a~~L~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dl~d~~~v~~~~~~~ 84 (291)
T 3rd5_A 16 QRTVVITGANSGLGAVTARELARRG-------ATVIMAVRDTRKGEAAARTMA----GQVEVRELDLQDLSSVRRFADGV 84 (291)
T ss_dssp TCEEEEECCSSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHTTSS----SEEEEEECCTTCHHHHHHHHHTC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHhc----CCeeEEEcCCCCHHHHHHHHHhc
Confidence 3579999999999999999999998 799999999999988877653 467899999999999999998
Q ss_pred -ccCeeEeccCCC
Q 014694 88 -QTKLLLNCVGPY 99 (420)
Q Consensus 88 -~~dvVIn~aGp~ 99 (420)
+.|+|||+||..
T Consensus 85 ~~iD~lv~nAg~~ 97 (291)
T 3rd5_A 85 SGADVLINNAGIM 97 (291)
T ss_dssp CCEEEEEECCCCC
T ss_pred CCCCEEEECCcCC
Confidence 469999999965
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=98.97 E-value=3.3e-09 Score=100.19 Aligned_cols=82 Identities=17% Similarity=0.229 Sum_probs=68.7
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH---
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC--- 86 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~--- 86 (420)
...|+|+||+|++|++++++|++++ ++|++.+|+.++++++.+++.. ...++.++.+|++|++++++++
T Consensus 14 ~k~vlITGasggiG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 85 (266)
T 1xq1_A 14 AKTVLVTGGTKGIGHAIVEEFAGFG-------AVIHTCARNEYELNECLSKWQK-KGFQVTGSVCDASLRPEREKLMQTV 85 (266)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCeeEEEECCCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 7999999999988877766531 1245778999999999999887
Q ss_pred -----hccCeeEeccCCC
Q 014694 87 -----SQTKLLLNCVGPY 99 (420)
Q Consensus 87 -----~~~dvVIn~aGp~ 99 (420)
.+.|+|||+||..
T Consensus 86 ~~~~~~~id~li~~Ag~~ 103 (266)
T 1xq1_A 86 SSMFGGKLDILINNLGAI 103 (266)
T ss_dssp HHHHTTCCSEEEEECCC-
T ss_pred HHHhCCCCcEEEECCCCC
Confidence 4679999999964
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=98.97 E-value=7.1e-10 Score=107.18 Aligned_cols=92 Identities=18% Similarity=0.271 Sum_probs=59.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~-- 88 (420)
++|+|+|||||+|++++++|++++ ++|++.+|+.++ . + ++.+|++|++++.+++++
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~--------~-----~--~~~~Dl~d~~~~~~~~~~~~ 60 (315)
T 2ydy_A 3 RRVLVTGATGLLGRAVHKEFQQNN-------WHAVGCGFRRAR--------P-----K--FEQVNLLDSNAVHHIIHDFQ 60 (315)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT-------CEEEEEC---------------------------------CHHHHHHHC
T ss_pred CeEEEECCCcHHHHHHHHHHHhCC-------CeEEEEccCCCC--------C-----C--eEEecCCCHHHHHHHHHhhC
Confidence 579999999999999999999987 799999987543 0 1 577899999999999985
Q ss_pred cCeeEeccCCCCCC----------------cHHHHHHHHHcCCcEEecCCcH
Q 014694 89 TKLLLNCVGPYRLH----------------GDPVAAACVHSGCDYLDISGEP 124 (420)
Q Consensus 89 ~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~~yvdisge~ 124 (420)
+|+||||||..... ..+++++|.+.+.++|.+|...
T Consensus 61 ~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~ 112 (315)
T 2ydy_A 61 PHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGAFLIYISSDY 112 (315)
T ss_dssp CSEEEECC-------------------CHHHHHHHHHHHHHTCEEEEEEEGG
T ss_pred CCEEEECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEchHH
Confidence 89999999975321 1678899998888888877543
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.96 E-value=1.6e-09 Score=107.13 Aligned_cols=106 Identities=14% Similarity=0.129 Sum_probs=74.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHH-HHHHHhCCC---CCCCccEEEEeCCCHHHHHHHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVK-QALQWASPS---HSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~-~~~~~l~~~---~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
++|+|+|||||+|++++++|++++ ++|.+.+|+.++.. ..++.+... ...++.++.+|++|++++.+++
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~ 74 (372)
T 1db3_A 2 KVALITGVTGQDGSYLAEFLLEKG-------YEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRIL 74 (372)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEECC---------------------CCEEECCCCSSCHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCC-------CEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHH
Confidence 479999999999999999999987 79999999865421 111111100 0246778899999999999999
Q ss_pred hc--cCeeEeccCCCCCC----------------cHHHHHHHHHcCC----cEEecCCc
Q 014694 87 SQ--TKLLLNCVGPYRLH----------------GDPVAAACVHSGC----DYLDISGE 123 (420)
Q Consensus 87 ~~--~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~----~yvdisge 123 (420)
++ +|+||||||..... ..+++++|.+.++ ++|.+|..
T Consensus 75 ~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~ 133 (372)
T 1db3_A 75 REVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTS 133 (372)
T ss_dssp HHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEG
T ss_pred HhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCh
Confidence 86 69999999975321 1567888888875 67777653
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=98.96 E-value=3.3e-09 Score=101.64 Aligned_cols=79 Identities=13% Similarity=0.027 Sum_probs=70.5
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
...++|+||+|+||+.+++.|++++ .+|++.+|+.++++++.++++ .++.++.+|++|+++++++++
T Consensus 27 ~k~vlVTGas~GIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~ 95 (277)
T 4dqx_A 27 QRVCIVTGGGSGIGRATAELFAKNG-------AYVVVADVNEDAAVRVANEIG----SKAFGVRVDVSSAKDAESMVEKT 95 (277)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESSHHHHHHHHHHHC----TTEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhC----CceEEEEecCCCHHHHHHHHHHH
Confidence 3479999999999999999999998 799999999999988888764 467889999999999999887
Q ss_pred -----ccCeeEeccCCC
Q 014694 88 -----QTKLLLNCVGPY 99 (420)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (420)
+.|+|||+||..
T Consensus 96 ~~~~g~iD~lv~nAg~~ 112 (277)
T 4dqx_A 96 TAKWGRVDVLVNNAGFG 112 (277)
T ss_dssp HHHHSCCCEEEECCCCC
T ss_pred HHHcCCCCEEEECCCcC
Confidence 689999999964
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=98.96 E-value=2.9e-10 Score=108.65 Aligned_cols=94 Identities=18% Similarity=0.207 Sum_probs=77.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc-c
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-T 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~-~ 89 (420)
++|+|+| +||+|++++++|++++ ++|.+.+|+.+++ ..++.++.+|+.|++++.+++++ +
T Consensus 4 ~~ilVtG-aG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~~~~ 64 (286)
T 3gpi_A 4 SKILIAG-CGDLGLELARRLTAQG-------HEVTGLRRSAQPM-----------PAGVQTLIADVTRPDTLASIVHLRP 64 (286)
T ss_dssp CCEEEEC-CSHHHHHHHHHHHHTT-------CCEEEEECTTSCC-----------CTTCCEEECCTTCGGGCTTGGGGCC
T ss_pred CcEEEEC-CCHHHHHHHHHHHHCC-------CEEEEEeCCcccc-----------ccCCceEEccCCChHHHHHhhcCCC
Confidence 5799999 5999999999999987 7899999987663 24688999999999999999988 9
Q ss_pred CeeEeccCCCCCC-----------cHHHHHHHHHcCC-cEEecCCc
Q 014694 90 KLLLNCVGPYRLH-----------GDPVAAACVHSGC-DYLDISGE 123 (420)
Q Consensus 90 dvVIn~aGp~~~~-----------~~~vv~Ac~~~g~-~yvdisge 123 (420)
|+|||+||+.... ..+++++|.+.++ ++|.+|..
T Consensus 65 d~vih~a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~ 110 (286)
T 3gpi_A 65 EILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSST 110 (286)
T ss_dssp SEEEECHHHHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEG
T ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEccc
Confidence 9999999863211 2678888887776 57766643
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.96 E-value=8.2e-10 Score=105.56 Aligned_cols=88 Identities=17% Similarity=0.299 Sum_probs=72.2
Q ss_pred CCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 014694 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 7 ~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
...+++|+|+|||||+|++++++|++++ ++|++.+|+ .+|++|++++.+++
T Consensus 9 ~~~~~~vlVtGatG~iG~~l~~~L~~~g-------~~V~~~~r~----------------------~~Dl~d~~~~~~~~ 59 (292)
T 1vl0_A 9 HHHHMKILITGANGQLGREIQKQLKGKN-------VEVIPTDVQ----------------------DLDITNVLAVNKFF 59 (292)
T ss_dssp ---CEEEEEESTTSHHHHHHHHHHTTSS-------EEEEEECTT----------------------TCCTTCHHHHHHHH
T ss_pred ccccceEEEECCCChHHHHHHHHHHhCC-------CeEEeccCc----------------------cCCCCCHHHHHHHH
Confidence 4456789999999999999999999987 899999985 15889999999999
Q ss_pred h--ccCeeEeccCCCCCC----------------cHHHHHHHHHcCCcEEecCCc
Q 014694 87 S--QTKLLLNCVGPYRLH----------------GDPVAAACVHSGCDYLDISGE 123 (420)
Q Consensus 87 ~--~~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~~yvdisge 123 (420)
+ ++|+||||||..... ..+++++|.++++++|.+|..
T Consensus 60 ~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~iv~~SS~ 114 (292)
T 1vl0_A 60 NEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTD 114 (292)
T ss_dssp HHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEG
T ss_pred HhcCCCEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEechH
Confidence 8 799999999975310 267889999888888887754
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=98.96 E-value=1.9e-09 Score=103.12 Aligned_cols=79 Identities=24% Similarity=0.236 Sum_probs=71.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|+||+.++++|++++ .+|++++|+.++++++.++++ .++.++.+|++|+++++++++
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~~ 97 (272)
T 4dyv_A 29 KIAIVTGAGSGVGRAVAVALAGAG-------YGVALAGRRLDALQETAAEIG----DDALCVPTDVTDPDSVRALFTATV 97 (272)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHT----SCCEEEECCTTSHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHhC----CCeEEEEecCCCHHHHHHHHHHHH
Confidence 468999999999999999999998 799999999999999888874 467899999999999999887
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 98 ~~~g~iD~lVnnAg~~~ 114 (272)
T 4dyv_A 98 EKFGRVDVLFNNAGTGA 114 (272)
T ss_dssp HHHSCCCEEEECCCCCC
T ss_pred HHcCCCCEEEECCCCCC
Confidence 7899999999743
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=98.96 E-value=3.3e-09 Score=100.03 Aligned_cols=80 Identities=14% Similarity=0.089 Sum_probs=71.5
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
...++|+||+|++|+.++++|++++ .+|++.+|+.++++++.++++ .++.++.+|++|.++++++++
T Consensus 9 ~k~vlITGas~gIG~~~a~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~ 77 (261)
T 3n74_A 9 GKVALITGAGSGFGEGMAKRFAKGG-------AKVVIVDRDKAGAERVAGEIG----DAALAVAADISKEADVDAAVEAA 77 (261)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHC----TTEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CEEEEEcCCHHHHHHHHHHhC----CceEEEEecCCCHHHHHHHHHHH
Confidence 3479999999999999999999998 799999999999999888774 467889999999999999887
Q ss_pred -----ccCeeEeccCCCC
Q 014694 88 -----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 78 ~~~~g~id~li~~Ag~~~ 95 (261)
T 3n74_A 78 LSKFGKVDILVNNAGIGH 95 (261)
T ss_dssp HHHHSCCCEEEECCCCCC
T ss_pred HHhcCCCCEEEECCccCC
Confidence 5799999999754
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=98.95 E-value=2.4e-09 Score=100.67 Aligned_cols=80 Identities=15% Similarity=0.106 Sum_probs=70.6
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
...++|+||+|+||+.++++|++++ .+|++.+|+.++++++.+++. .+...+.+|++|+++++++++
T Consensus 9 gk~~lVTGas~gIG~a~a~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~ 77 (248)
T 3op4_A 9 GKVALVTGASRGIGKAIAELLAERG-------AKVIGTATSESGAQAISDYLG----DNGKGMALNVTNPESIEAVLKAI 77 (248)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTT-------CEEEEEESSHHHHHHHHHHHG----GGEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhc----ccceEEEEeCCCHHHHHHHHHHH
Confidence 3479999999999999999999998 899999999999988888774 346788999999999999887
Q ss_pred -----ccCeeEeccCCCC
Q 014694 88 -----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 78 ~~~~g~iD~lv~nAg~~~ 95 (248)
T 3op4_A 78 TDEFGGVDILVNNAGITR 95 (248)
T ss_dssp HHHHCCCSEEEECCCCCC
T ss_pred HHHcCCCCEEEECCCCCC
Confidence 6899999999653
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=98.95 E-value=5.6e-09 Score=99.06 Aligned_cols=81 Identities=16% Similarity=0.113 Sum_probs=71.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++||||++.||+.+++.|++++ .+|++.+|++++++++.+++.. ...++..+.+|++|+++++++++
T Consensus 8 KvalVTGas~GIG~aiA~~la~~G-------a~Vv~~~~~~~~~~~~~~~i~~-~g~~~~~~~~Dvt~~~~v~~~~~~~~ 79 (254)
T 4fn4_A 8 KVVIVTGAGSGIGRAIAKKFALND-------SIVVAVELLEDRLNQIVQELRG-MGKEVLGVKADVSKKKDVEEFVRRTF 79 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcC-------CEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 469999999999999999999998 8999999999999998887742 23567889999999999999876
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
+.|++||+||..
T Consensus 80 ~~~G~iDiLVNNAGi~ 95 (254)
T 4fn4_A 80 ETYSRIDVLCNNAGIM 95 (254)
T ss_dssp HHHSCCCEEEECCCCC
T ss_pred HHcCCCCEEEECCccc
Confidence 579999999954
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=98.95 E-value=1.9e-09 Score=101.18 Aligned_cols=82 Identities=15% Similarity=0.135 Sum_probs=70.8
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
...++|+||+|++|+.++++|++++ .+|++.+|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 9 ~k~vlITGas~giG~~~a~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (253)
T 3qiv_A 9 NKVGIVTGSGGGIGQAYAEALAREG-------AAVVVADINAEAAEAVAKQIVA-DGGTAISVAVDVSDPESAKAMADRT 80 (253)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHH-TTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC-------CEEEEEcCCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHH
Confidence 3479999999999999999999998 7999999999999888776632 23467789999999999999887
Q ss_pred -----ccCeeEeccCCC
Q 014694 88 -----QTKLLLNCVGPY 99 (420)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (420)
+.|+|||+||.+
T Consensus 81 ~~~~g~id~li~~Ag~~ 97 (253)
T 3qiv_A 81 LAEFGGIDYLVNNAAIF 97 (253)
T ss_dssp HHHHSCCCEEEECCCCC
T ss_pred HHHcCCCCEEEECCCcC
Confidence 789999999974
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=98.95 E-value=1.2e-09 Score=105.82 Aligned_cols=99 Identities=18% Similarity=0.239 Sum_probs=76.2
Q ss_pred CCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 014694 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 7 ~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
..+.++|+|+|||||+|++++++|++++ ++|++.+|+.++ +. + ++.++.+|++|++++.+++
T Consensus 9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G-------~~V~~~~r~~~~-~~----l------~~~~~~~Dl~d~~~~~~~~ 70 (321)
T 2pk3_A 9 HHGSMRALITGVAGFVGKYLANHLTEQN-------VEVFGTSRNNEA-KL----P------NVEMISLDIMDSQRVKKVI 70 (321)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCTTC-CC----T------TEEEEECCTTCHHHHHHHH
T ss_pred ccCcceEEEECCCChHHHHHHHHHHHCC-------CEEEEEecCCcc-cc----c------eeeEEECCCCCHHHHHHHH
Confidence 3455689999999999999999999987 799999998754 21 1 4678899999999999999
Q ss_pred hc--cCeeEeccCCCCCC----------------cHHHHHHHHHc-CC-cEEecCCc
Q 014694 87 SQ--TKLLLNCVGPYRLH----------------GDPVAAACVHS-GC-DYLDISGE 123 (420)
Q Consensus 87 ~~--~dvVIn~aGp~~~~----------------~~~vv~Ac~~~-g~-~yvdisge 123 (420)
++ +|+||||||+.... ..+++++|.+. +. ++|.+|..
T Consensus 71 ~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~ 127 (321)
T 2pk3_A 71 SDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSS 127 (321)
T ss_dssp HHHCCSEEEECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEG
T ss_pred HhcCCCEEEEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccH
Confidence 86 89999999975410 25678888765 33 67776643
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=4.3e-10 Score=111.88 Aligned_cols=104 Identities=16% Similarity=0.119 Sum_probs=76.2
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhH-----HHHHHHHhCCCCCC-CccEEEEeCCCHHHHHHH
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR-----VKQALQWASPSHSL-SIPILTADTTDPPSLHRL 85 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~k-----l~~~~~~l~~~~~~-~~~~i~~D~~d~~sl~~~ 85 (420)
+|+|+|||||||++++++|++.+ ++|++++|+.++ ++.+.+.+.. ... ++.++.+|++|++++.++
T Consensus 30 ~vlVtGatG~IG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~ 101 (381)
T 1n7h_A 30 IALITGITGQDGSYLTEFLLGKG-------YEVHGLIRRSSNFNTQRINHIYIDPHN-VNKALMKLHYADLTDASSLRRW 101 (381)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-------CEEEEEECCCSSCCCTTTTTTC---------CCEEEEECCTTCHHHHHHH
T ss_pred eEEEEcCCchHHHHHHHHHHHCC-------CEEEEEecCCccccchhhhhhhhcccc-ccccceEEEECCCCCHHHHHHH
Confidence 79999999999999999999987 799999998654 2222111100 012 577899999999999999
Q ss_pred Hhc--cCeeEeccCCCCCC----------------cHHHHHHHHHcCC------cEEecCCc
Q 014694 86 CSQ--TKLLLNCVGPYRLH----------------GDPVAAACVHSGC------DYLDISGE 123 (420)
Q Consensus 86 ~~~--~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~------~yvdisge 123 (420)
+++ +|+||||||+.... ..+++++|.+.++ ++|.+|..
T Consensus 102 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~ 163 (381)
T 1n7h_A 102 IDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSS 163 (381)
T ss_dssp HHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEG
T ss_pred HHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcH
Confidence 986 59999999975421 1567888887653 66766643
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=98.95 E-value=1.4e-09 Score=102.59 Aligned_cols=83 Identities=12% Similarity=0.109 Sum_probs=71.5
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
...++|+||+|+||+.++++|++++ .+|++.+|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 7 ~k~vlVTGas~GIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~ 78 (252)
T 3h7a_A 7 NATVAVIGAGDYIGAEIAKKFAAEG-------FTVFAGRRNGEKLAPLVAEIEA-AGGRIVARSLDARNEDEVTAFLNAA 78 (252)
T ss_dssp SCEEEEECCSSHHHHHHHHHHHHTT-------CEEEEEESSGGGGHHHHHHHHH-TTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEECcCCCHHHHHHHHHHH
Confidence 3479999999999999999999998 7999999999998888777642 23467889999999999999987
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 79 ~~~g~id~lv~nAg~~~ 95 (252)
T 3h7a_A 79 DAHAPLEVTIFNVGANV 95 (252)
T ss_dssp HHHSCEEEEEECCCCCC
T ss_pred HhhCCceEEEECCCcCC
Confidence 5699999999654
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=9.7e-10 Score=106.20 Aligned_cols=93 Identities=14% Similarity=0.122 Sum_probs=75.7
Q ss_pred eEEEEcCCcHHHHHHHHHHHHh--CCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 12 DVIILGASGFTGKYVVREALKL--FNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~--~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
+|+|+|||||+|++++++|++. + ++|.+.+|+..+. .++.++.+|++|++++.++++
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g-------~~V~~~~r~~~~~------------~~~~~~~~D~~d~~~~~~~~~~~ 61 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGK-------KNVIASDIVQRDT------------GGIKFITLDVSNRDEIDRAVEKY 61 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCG-------GGEEEEESSCCCC------------TTCCEEECCTTCHHHHHHHHHHT
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCC-------CEEEEecCCCccc------------cCceEEEecCCCHHHHHHHHhhc
Confidence 4899999999999999999998 5 7899999875442 145789999999999999998
Q ss_pred ccCeeEeccCCCCCC---------------cHHHHHHHHHcCC-cEEecCCc
Q 014694 88 QTKLLLNCVGPYRLH---------------GDPVAAACVHSGC-DYLDISGE 123 (420)
Q Consensus 88 ~~dvVIn~aGp~~~~---------------~~~vv~Ac~~~g~-~yvdisge 123 (420)
++|+|||+||..... ..+++++|.+.++ ++|.+|..
T Consensus 62 ~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~ 113 (317)
T 3ajr_A 62 SIDAIFHLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTI 113 (317)
T ss_dssp TCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEG
T ss_pred CCcEEEECCcccCCccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCH
Confidence 899999999975311 1578888988887 67776643
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.95 E-value=1.6e-09 Score=103.25 Aligned_cols=82 Identities=22% Similarity=0.199 Sum_probs=70.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|+||+.++++|++++ .+|++++|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 5 k~~lVTGas~GIG~aia~~la~~G-------~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~ 76 (264)
T 3tfo_A 5 KVILITGASGGIGEGIARELGVAG-------AKILLGARRQARIEAIATEIRD-AGGTALAQVLDVTDRHSVAAFAQAAV 76 (264)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTT-------CEEEEEESSHHHHHHHHHHHHH-TTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEeCCccHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 7999999999999888877632 13457788999999999999876
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 77 ~~~g~iD~lVnnAG~~~ 93 (264)
T 3tfo_A 77 DTWGRIDVLVNNAGVMP 93 (264)
T ss_dssp HHHSCCCEEEECCCCCC
T ss_pred HHcCCCCEEEECCCCCC
Confidence 6899999999653
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=98.95 E-value=2.1e-09 Score=102.38 Aligned_cols=93 Identities=14% Similarity=0.065 Sum_probs=76.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
++|+|+|| ||+|++++++|++++ ++|.+.+|+.++.+.+.. .+++++.+|++|.+ +.++|
T Consensus 6 ~~ilVtGa-G~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~-------~~~~~~~~D~~d~~-----~~~~d 65 (286)
T 3ius_A 6 GTLLSFGH-GYTARVLSRALAPQG-------WRIIGTSRNPDQMEAIRA-------SGAEPLLWPGEEPS-----LDGVT 65 (286)
T ss_dssp CEEEEETC-CHHHHHHHHHHGGGT-------CEEEEEESCGGGHHHHHH-------TTEEEEESSSSCCC-----CTTCC
T ss_pred CcEEEECC-cHHHHHHHHHHHHCC-------CEEEEEEcChhhhhhHhh-------CCCeEEEecccccc-----cCCCC
Confidence 68999998 999999999999987 899999999988765543 35788999999844 78999
Q ss_pred eeEeccCCCCCC---cHHHHHHHHH--cCC-cEEecCCc
Q 014694 91 LLLNCVGPYRLH---GDPVAAACVH--SGC-DYLDISGE 123 (420)
Q Consensus 91 vVIn~aGp~~~~---~~~vv~Ac~~--~g~-~yvdisge 123 (420)
+|||++++.... ..+++++|.+ .++ ++|.+|..
T Consensus 66 ~vi~~a~~~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss~ 104 (286)
T 3ius_A 66 HLLISTAPDSGGDPVLAALGDQIAARAAQFRWVGYLSTT 104 (286)
T ss_dssp EEEECCCCBTTBCHHHHHHHHHHHHTGGGCSEEEEEEEG
T ss_pred EEEECCCccccccHHHHHHHHHHHhhcCCceEEEEeecc
Confidence 999999986442 3678999988 565 67777754
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=1.2e-09 Score=105.59 Aligned_cols=99 Identities=18% Similarity=0.275 Sum_probs=77.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--c
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--Q 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--~ 88 (420)
|+|+|+|||||+|++++++|++++ ++|++.+|+..... +.+ ..++.++.+|++|++++.++++ +
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G-------~~V~~~~r~~~~~~---~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~ 66 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLARG-------LEVAVLDNLATGKR---ENV----PKGVPFFRVDLRDKEGVERAFREFR 66 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT-------CEEEEECCCSSCCG---GGS----CTTCCEECCCTTCHHHHHHHHHHHC
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCC-------CEEEEEECCCcCch---hhc----ccCeEEEECCCCCHHHHHHHHHhcC
Confidence 479999999999999999999987 78999998543211 111 1357789999999999999998 7
Q ss_pred cCeeEeccCCCCCC----------------cHHHHHHHHHcCC-cEEecCCc
Q 014694 89 TKLLLNCVGPYRLH----------------GDPVAAACVHSGC-DYLDISGE 123 (420)
Q Consensus 89 ~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~-~yvdisge 123 (420)
+|+|||++|..... ..+++++|.+.++ ++|.+|..
T Consensus 67 ~d~vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~ 118 (311)
T 2p5y_A 67 PTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTG 118 (311)
T ss_dssp CSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEH
T ss_pred CCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCC
Confidence 99999999975310 1578888888887 67777654
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.95 E-value=2.7e-09 Score=99.93 Aligned_cols=81 Identities=20% Similarity=0.148 Sum_probs=70.6
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
+...|+|+||+|+||+++++.|++++ .+|++.+|+.++++++.+++. .++.++.+|++|.+++.++++
T Consensus 13 ~~k~vlVTGas~gIG~~~a~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~ 81 (249)
T 3f9i_A 13 TGKTSLITGASSGIGSAIARLLHKLG-------SKVIISGSNEEKLKSLGNALK----DNYTIEVCNLANKEECSNLISK 81 (249)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHC----SSEEEEECCTTSHHHHHHHHHT
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCC-------CEEEEEcCCHHHHHHHHHHhc----cCccEEEcCCCCHHHHHHHHHh
Confidence 44579999999999999999999998 799999999999998888774 467889999999999999988
Q ss_pred --ccCeeEeccCCCC
Q 014694 88 --QTKLLLNCVGPYR 100 (420)
Q Consensus 88 --~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 82 ~~~id~li~~Ag~~~ 96 (249)
T 3f9i_A 82 TSNLDILVCNAGITS 96 (249)
T ss_dssp CSCCSEEEECCC---
T ss_pred cCCCCEEEECCCCCC
Confidence 5799999999643
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=8.4e-09 Score=96.89 Aligned_cols=79 Identities=16% Similarity=0.236 Sum_probs=66.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh-hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~-~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..++|+||+|+||+.++++|++++ ++|++.+|+. +++++.+++. ..++.++.+|++|+++++++++
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~ 76 (249)
T 2ew8_A 8 KLAVITGGANGIGRAIAERFAVEG-------ADIAIADLVPAPEAEAAIRNL----GRRVLTVKCDVSQPGDVEAFGKQV 76 (249)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESSCCHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEcCCchhHHHHHHHhc----CCcEEEEEeecCCHHHHHHHHHHH
Confidence 479999999999999999999998 7999999998 7776544443 2467889999999999998865
Q ss_pred -----ccCeeEeccCCCC
Q 014694 88 -----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 77 ~~~~g~id~lv~nAg~~~ 94 (249)
T 2ew8_A 77 ISTFGRCDILVNNAGIYP 94 (249)
T ss_dssp HHHHSCCCEEEECCCCCC
T ss_pred HHHcCCCCEEEECCCCCC
Confidence 6899999999643
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=4.1e-09 Score=100.06 Aligned_cols=81 Identities=15% Similarity=0.167 Sum_probs=70.4
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
...|+|+||+|++|+.++++|++++ ++|++.+|+.++++++.+++.. ..++.++.+|++|+++++++++
T Consensus 16 ~k~vlITGasggiG~~~a~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~ 86 (278)
T 2bgk_A 16 DKVAIITGGAGGIGETTAKLFVRYG-------AKVVIADIADDHGQKVCNNIGS--PDVISFVHCDVTKDEDVRNLVDTT 86 (278)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHCC--TTTEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEcCChhHHHHHHHHhCC--CCceEEEECCCCCHHHHHHHHHHH
Confidence 3479999999999999999999998 7999999999888877777742 2367889999999999999887
Q ss_pred -----ccCeeEeccCCC
Q 014694 88 -----QTKLLLNCVGPY 99 (420)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (420)
+.|+|||++|..
T Consensus 87 ~~~~~~id~li~~Ag~~ 103 (278)
T 2bgk_A 87 IAKHGKLDIMFGNVGVL 103 (278)
T ss_dssp HHHHSCCCEEEECCCCC
T ss_pred HHHcCCCCEEEECCccc
Confidence 689999999964
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.94 E-value=8.6e-10 Score=109.45 Aligned_cols=106 Identities=14% Similarity=0.141 Sum_probs=77.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhH-----HHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR-----VKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~k-----l~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~ 85 (420)
++|+|+|||||+|++++++|++++ ++|++++|+.++ ++.+.+........++.++.+|++|++++.++
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 97 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKG-------YEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKI 97 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHH
T ss_pred cEEEEECCCchHHHHHHHHHHHCC-------CEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHH
Confidence 379999999999999999999987 799999997543 22221110000123577899999999999999
Q ss_pred Hhc--cCeeEeccCCCCCC----------------cHHHHHHHHHcCC----cEEecCCc
Q 014694 86 CSQ--TKLLLNCVGPYRLH----------------GDPVAAACVHSGC----DYLDISGE 123 (420)
Q Consensus 86 ~~~--~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~----~yvdisge 123 (420)
+++ +|+||||||+.... ..+++++|.+.++ ++|.+|..
T Consensus 98 ~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~ 157 (375)
T 1t2a_A 98 INEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTS 157 (375)
T ss_dssp HHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEG
T ss_pred HHhcCCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecch
Confidence 986 59999999975421 1567888888875 67776653
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=98.94 E-value=6.5e-09 Score=97.47 Aligned_cols=82 Identities=13% Similarity=0.160 Sum_probs=67.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEec-ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagR-s~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..++|+||+|+||++++++|++++ .+|++.+| +.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 5 k~~lVTGas~gIG~~ia~~l~~~G-------~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~ 76 (246)
T 3osu_A 5 KSALVTGASRGIGRSIALQLAEEG-------YNVAVNYAGSKEKAEAVVEEIKA-KGVDSFAIQANVADADEVKAMIKEV 76 (246)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTT-------CEEEEEESSCHHHHHHHHHHHHH-TTSCEEEEECCTTCHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHH
Confidence 479999999999999999999998 78888776 56777777666531 23467789999999999999887
Q ss_pred -----ccCeeEeccCCCC
Q 014694 88 -----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 77 ~~~~g~id~lv~nAg~~~ 94 (246)
T 3osu_A 77 VSQFGSLDVLVNNAGITR 94 (246)
T ss_dssp HHHHSCCCEEEECCCCCC
T ss_pred HHHcCCCCEEEECCCCCC
Confidence 6799999999653
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=98.94 E-value=1.2e-09 Score=102.38 Aligned_cols=80 Identities=20% Similarity=0.267 Sum_probs=68.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC-hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs-~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..|+|+||+|++|++++++|++++ ++|++.+|+ .++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 8 k~vlVTGasggiG~~~a~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 79 (258)
T 3afn_B 8 KRVLITGSSQGIGLATARLFARAG-------AKVGLHGRKAPANIDETIASMRA-DGGDAAFFAADLATSEACQQLVDEF 79 (258)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTT-------CEEEEEESSCCTTHHHHHHHHHH-TTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCC-------CEEEEECCCchhhHHHHHHHHHh-cCCceEEEECCCCCHHHHHHHHHHH
Confidence 479999999999999999999998 799999999 8888777665531 12457889999999999999987
Q ss_pred -----ccCeeEeccCC
Q 014694 88 -----QTKLLLNCVGP 98 (420)
Q Consensus 88 -----~~dvVIn~aGp 98 (420)
+.|+|||+||.
T Consensus 80 ~~~~g~id~vi~~Ag~ 95 (258)
T 3afn_B 80 VAKFGGIDVLINNAGG 95 (258)
T ss_dssp HHHHSSCSEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 78999999996
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.94 E-value=2.5e-09 Score=99.66 Aligned_cols=89 Identities=20% Similarity=0.204 Sum_probs=69.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..|+|+||+|++|+.++++|++++........+|++.+|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 3 k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~ 81 (244)
T 2bd0_A 3 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRA-EGALTDTITADISDMADVRRLTTHIV 81 (244)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHT-TTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHc-cCCeeeEEEecCCCHHHHHHHHHHHH
Confidence 46999999999999999999999810000001899999999988887776631 13457789999999999999887
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 82 ~~~g~id~li~~Ag~~~ 98 (244)
T 2bd0_A 82 ERYGHIDCLVNNAGVGR 98 (244)
T ss_dssp HHTSCCSEEEECCCCCC
T ss_pred HhCCCCCEEEEcCCcCC
Confidence 6899999999653
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=98.94 E-value=2.9e-09 Score=100.11 Aligned_cols=79 Identities=19% Similarity=0.174 Sum_probs=70.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|+||+.++++|++++ .+|++.+|+.++++++.++++ .++.++.+|++|+++++++++
T Consensus 7 k~vlVTGas~gIG~a~a~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~ 75 (247)
T 3rwb_A 7 KTALVTGAAQGIGKAIAARLAADG-------ATVIVSDINAEGAKAAAASIG----KKARAIAADISDPGSVKALFAEIQ 75 (247)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEECSCHHHHHHHHHHHC----TTEEECCCCTTCHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhC----CceEEEEcCCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 799999999999988888774 467888999999999999887
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 76 ~~~g~id~lv~nAg~~~ 92 (247)
T 3rwb_A 76 ALTGGIDILVNNASIVP 92 (247)
T ss_dssp HHHSCCSEEEECCCCCC
T ss_pred HHCCCCCEEEECCCCCC
Confidence 6899999999653
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.94 E-value=2.3e-09 Score=102.19 Aligned_cols=81 Identities=20% Similarity=0.217 Sum_probs=68.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHh---CCCCCCCccEEEEeCCCHHHHHHHHh
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWA---SPSHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l---~~~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
..++|+||+|+||+.++++|++++ ++|++.+|+.++++++.+++ .. ...++.++.+|++|+++++++++
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~ 78 (278)
T 1spx_A 7 KVAIITGSSNGIGRATAVLFAREG-------AKVTITGRHAERLEETRQQILAAGV-SEQNVNSVVADVTTDAGQDEILS 78 (278)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHHTTC-CGGGEEEEECCTTSHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHhccc-CCCceeEEecccCCHHHHHHHHH
Confidence 479999999999999999999998 79999999999988877766 31 12356788999999999999887
Q ss_pred -------ccCeeEeccCCC
Q 014694 88 -------QTKLLLNCVGPY 99 (420)
Q Consensus 88 -------~~dvVIn~aGp~ 99 (420)
+.|+|||+||..
T Consensus 79 ~~~~~~g~id~lv~~Ag~~ 97 (278)
T 1spx_A 79 TTLGKFGKLDILVNNAGAA 97 (278)
T ss_dssp HHHHHHSCCCEEEECCC--
T ss_pred HHHHHcCCCCEEEECCCCC
Confidence 789999999964
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.94 E-value=2.4e-09 Score=101.00 Aligned_cols=81 Identities=16% Similarity=0.097 Sum_probs=69.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|+||+.++++|++++ ++|++.+|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~ 74 (256)
T 1geg_A 3 KVALVTGAGQGIGKAIALRLVKDG-------FAVAIADYNDATAKAVASEINQ-AGGHAVAVKVDVSDRDQVFAAVEQAR 74 (256)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHHH
Confidence 369999999999999999999998 7999999999988877766531 12457789999999999999887
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
+.|+|||+||..
T Consensus 75 ~~~g~id~lv~nAg~~ 90 (256)
T 1geg_A 75 KTLGGFDVIVNNAGVA 90 (256)
T ss_dssp HHTTCCCEEEECCCCC
T ss_pred HHhCCCCEEEECCCCC
Confidence 789999999964
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.94 E-value=4.9e-09 Score=101.39 Aligned_cols=82 Identities=23% Similarity=0.263 Sum_probs=69.5
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCC---CccEEEEeCCCHHHHHHHH
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSL---SIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~---~~~~i~~D~~d~~sl~~~~ 86 (420)
...++|+||+|+||+.+++.|++++ ++|++.+|+.++++++.+++.. ... ++.++.+|++|++++++++
T Consensus 26 ~k~vlVTGas~gIG~aia~~L~~~G-------~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~~~~Dv~d~~~v~~~~ 97 (297)
T 1xhl_A 26 GKSVIITGSSNGIGRSAAVIFAKEG-------AQVTITGRNEDRLEETKQQILK-AGVPAEKINAVVADVTEASGQDDII 97 (297)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHH-TTCCGGGEEEEECCTTSHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCCCceEEEEecCCCCHHHHHHHH
Confidence 3479999999999999999999998 7999999999998887766531 112 5778999999999999988
Q ss_pred h-------ccCeeEeccCCC
Q 014694 87 S-------QTKLLLNCVGPY 99 (420)
Q Consensus 87 ~-------~~dvVIn~aGp~ 99 (420)
+ +.|+|||+||..
T Consensus 98 ~~~~~~~g~iD~lvnnAG~~ 117 (297)
T 1xhl_A 98 NTTLAKFGKIDILVNNAGAN 117 (297)
T ss_dssp HHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHhcCCCCEEEECCCcC
Confidence 7 689999999964
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=98.93 E-value=1.1e-09 Score=104.70 Aligned_cols=82 Identities=17% Similarity=0.184 Sum_probs=71.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|+||+.++++|++++ .+|++.+|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 27 k~~lVTGas~gIG~aia~~la~~G-------~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~ 98 (271)
T 4ibo_A 27 RTALVTGSSRGLGRAMAEGLAVAG-------ARILINGTDPSRVAQTVQEFRN-VGHDAEAVAFDVTSESEIIEAFARLD 98 (271)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTT-------CEEEECCSCHHHHHHHHHHHHH-TTCCEEECCCCTTCHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 7999999999999888877632 23467788999999999999887
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 99 ~~~g~iD~lv~nAg~~~ 115 (271)
T 4ibo_A 99 EQGIDVDILVNNAGIQF 115 (271)
T ss_dssp HHTCCCCEEEECCCCCC
T ss_pred HHCCCCCEEEECCCCCC
Confidence 6899999999653
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.93 E-value=2.6e-09 Score=99.74 Aligned_cols=78 Identities=18% Similarity=0.230 Sum_probs=69.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|+||+.++++|++++ .+|++.+|+.++++++.++++ .++.++.+|++|+++++++++
T Consensus 4 k~vlVTGas~GIG~a~a~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~ 72 (235)
T 3l6e_A 4 GHIIVTGAGSGLGRALTIGLVERG-------HQVSMMGRRYQRLQQQELLLG----NAVIGIVADLAHHEDVDVAFAAAV 72 (235)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHG----GGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHhc----CCceEEECCCCCHHHHHHHHHHHH
Confidence 369999999999999999999998 799999999999988888774 257889999999999999887
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
+.|+|||+||..
T Consensus 73 ~~~g~id~lvnnAg~~ 88 (235)
T 3l6e_A 73 EWGGLPELVLHCAGTG 88 (235)
T ss_dssp HHHCSCSEEEEECCCC
T ss_pred HhcCCCcEEEECCCCC
Confidence 469999999964
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=98.93 E-value=1e-09 Score=118.23 Aligned_cols=103 Identities=15% Similarity=0.165 Sum_probs=79.4
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhH----HHHHHHHhCCCCCCCccEEEEeCCCHHHHHH
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR----VKQALQWASPSHSLSIPILTADTTDPPSLHR 84 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~k----l~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~ 84 (420)
..++|+|+|||||||++++++|++++ ++|++++|+..+ ++.+ +.+. ..++.++.+|+.|++++.+
T Consensus 10 ~~~~ilVTGatG~IG~~l~~~L~~~G-------~~V~~~~r~~~~~~~~~~~l-~~~~---~~~v~~v~~Dl~d~~~l~~ 78 (699)
T 1z45_A 10 TSKIVLVTGGAGYIGSHTVVELIENG-------YDCVVADNLSNSTYDSVARL-EVLT---KHHIPFYEVDLCDRKGLEK 78 (699)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEECCSSCCTHHHHHH-HHHH---TSCCCEEECCTTCHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCc-------CEEEEEECCCcchHHHHHHH-hhcc---CCceEEEEcCCCCHHHHHH
Confidence 34689999999999999999999987 789999987543 2222 1121 2467899999999999999
Q ss_pred HHh--ccCeeEeccCCCCCC----------------cHHHHHHHHHcCC-cEEecCC
Q 014694 85 LCS--QTKLLLNCVGPYRLH----------------GDPVAAACVHSGC-DYLDISG 122 (420)
Q Consensus 85 ~~~--~~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~-~yvdisg 122 (420)
+++ ++|+|||+||..... ..+++++|.+.++ ++|.+|.
T Consensus 79 ~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS 135 (699)
T 1z45_A 79 VFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSS 135 (699)
T ss_dssp HHHHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred HHHhCCCCEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECc
Confidence 998 799999999975421 1578899998886 5666653
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=98.93 E-value=5e-09 Score=97.40 Aligned_cols=81 Identities=21% Similarity=0.209 Sum_probs=66.7
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEE-ecChhHHHHHHHHhCCCCCCCccE-EEEeCCCHHHHHHHHh--
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA-GRNPTRVKQALQWASPSHSLSIPI-LTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~ia-gRs~~kl~~~~~~l~~~~~~~~~~-i~~D~~d~~sl~~~~~-- 87 (420)
.|+|+||+|++|++++++|++++ ++|++. +|+.++++++.+++.. ...++.. +.+|++|+++++++++
T Consensus 3 ~vlITGasggiG~~~a~~l~~~G-------~~v~~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~ 74 (245)
T 2ph3_A 3 KALITGASRGIGRAIALRLAEDG-------FALAIHYGQNREKAEEVAEEARR-RGSPLVAVLGANLLEAEAATALVHQA 74 (245)
T ss_dssp EEEETTTTSHHHHHHHHHHHTTT-------CEEEEEESSCHHHHHHHHHHHHH-TTCSCEEEEECCTTSHHHHHHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHHHCC-------CEEEEEcCCCHHHHHHHHHHHHh-cCCceEEEEeccCCCHHHHHHHHHHH
Confidence 69999999999999999999988 788887 8999888777665531 1234555 8899999999998865
Q ss_pred -----ccCeeEeccCCCC
Q 014694 88 -----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 75 ~~~~~~~d~li~~Ag~~~ 92 (245)
T 2ph3_A 75 AEVLGGLDTLVNNAGITR 92 (245)
T ss_dssp HHHHTCCCEEEECCCCCC
T ss_pred HHhcCCCCEEEECCCCCC
Confidence 6899999999653
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=98.93 E-value=2.7e-09 Score=103.15 Aligned_cols=83 Identities=14% Similarity=0.153 Sum_probs=71.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|+||+.+++.|++++ .+|++.+|+.++++++.+++......++.++.+|++|+++++++++
T Consensus 42 k~vlVTGas~GIG~aia~~la~~G-------~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 114 (293)
T 3rih_A 42 RSVLVTGGTKGIGRGIATVFARAG-------ANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVV 114 (293)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT-------CEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 7999999999999888888853112467889999999999998876
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 115 ~~~g~iD~lvnnAg~~~ 131 (293)
T 3rih_A 115 DAFGALDVVCANAGIFP 131 (293)
T ss_dssp HHHSCCCEEEECCCCCC
T ss_pred HHcCCCCEEEECCCCCC
Confidence 5699999999653
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.93 E-value=2.5e-09 Score=100.72 Aligned_cols=84 Identities=12% Similarity=0.083 Sum_probs=66.5
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc-
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~- 88 (420)
...|+|+||+|+||++++++|++++ ++|++.+|+.++.++..+++......++.++.+|++|++++++++++
T Consensus 14 ~k~vlITGasggiG~~~a~~l~~~G-------~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 86 (265)
T 1h5q_A 14 NKTIIVTGGNRGIGLAFTRAVAAAG-------ANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQI 86 (265)
T ss_dssp TEEEEEETTTSHHHHHHHHHHHHTT-------EEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHH
Confidence 3479999999999999999999998 89999999766655444443100124678899999999999988764
Q ss_pred ------cCeeEeccCCCC
Q 014694 89 ------TKLLLNCVGPYR 100 (420)
Q Consensus 89 ------~dvVIn~aGp~~ 100 (420)
.|+|||+||...
T Consensus 87 ~~~~~~id~li~~Ag~~~ 104 (265)
T 1h5q_A 87 DADLGPISGLIANAGVSV 104 (265)
T ss_dssp HHHSCSEEEEEECCCCCC
T ss_pred HHhcCCCCEEEECCCcCC
Confidence 799999999653
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=98.93 E-value=2e-09 Score=101.98 Aligned_cols=82 Identities=11% Similarity=0.128 Sum_probs=69.6
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEE-ecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA-GRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~ia-gRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
...++|+||+|+||+.++++|++++ .+|++. +|+.++++++.+++.. ...++.++.+|++|+++++++++.
T Consensus 4 ~k~vlVTGas~gIG~aia~~l~~~G-------~~vv~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~ 75 (258)
T 3oid_A 4 NKCALVTGSSRGVGKAAAIRLAENG-------YNIVINYARSKKAALETAEEIEK-LGVKVLVVKANVGQPAKIKEMFQQ 75 (258)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHTT-------CEEEEEESSCHHHHHHHHHHHHT-TTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEecCCchHHHHHHHHHHHCC-------CEEEEEcCCCHHHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHH
Confidence 3479999999999999999999998 788886 8999998888777642 234678899999999999998874
Q ss_pred -------cCeeEeccCCC
Q 014694 89 -------TKLLLNCVGPY 99 (420)
Q Consensus 89 -------~dvVIn~aGp~ 99 (420)
.|+|||+||..
T Consensus 76 ~~~~~g~id~lv~nAg~~ 93 (258)
T 3oid_A 76 IDETFGRLDVFVNNAASG 93 (258)
T ss_dssp HHHHHSCCCEEEECCCCC
T ss_pred HHHHcCCCCEEEECCCCC
Confidence 59999999954
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.93 E-value=5.1e-09 Score=99.63 Aligned_cols=83 Identities=17% Similarity=0.150 Sum_probs=69.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|+||+.++++|++++ ++|++.+|+.++++++.+++......++.++.+|++|+++++++++
T Consensus 22 k~~lVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 94 (267)
T 1vl8_A 22 RVALVTGGSRGLGFGIAQGLAEAG-------CSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVK 94 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 469999999999999999999998 7999999999988777665510012356788999999999998887
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 95 ~~~g~iD~lvnnAg~~~ 111 (267)
T 1vl8_A 95 EKFGKLDTVVNAAGINR 111 (267)
T ss_dssp HHHSCCCEEEECCCCCC
T ss_pred HHcCCCCEEEECCCcCC
Confidence 6899999999653
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=98.93 E-value=2.3e-09 Score=100.91 Aligned_cols=77 Identities=17% Similarity=0.252 Sum_probs=69.2
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh----
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~---- 87 (420)
.++|+||+|+||+.++++|++++ .+|++.+|+.++++++.+++. .++.++.+|++|+++++++++
T Consensus 2 ~vlVTGas~gIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~ 70 (248)
T 3asu_A 2 IVLVTGATAGFGECITRRFIQQG-------HKVIATGRRQERLQELKDELG----DNLYIAQLDVRNRAAIEEMLASLPA 70 (248)
T ss_dssp EEEETTTTSTTHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHC----TTEEEEECCTTCHHHHHHHHHTSCT
T ss_pred EEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhc----CceEEEEcCCCCHHHHHHHHHHHHH
Confidence 58999999999999999999998 899999999999988887774 367789999999999999987
Q ss_pred ---ccCeeEeccCCC
Q 014694 88 ---QTKLLLNCVGPY 99 (420)
Q Consensus 88 ---~~dvVIn~aGp~ 99 (420)
+.|+|||+||..
T Consensus 71 ~~g~iD~lvnnAg~~ 85 (248)
T 3asu_A 71 EWCNIDILVNNAGLA 85 (248)
T ss_dssp TTCCCCEEEECCCCC
T ss_pred hCCCCCEEEECCCcC
Confidence 579999999964
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=98.93 E-value=4e-09 Score=100.84 Aligned_cols=82 Identities=17% Similarity=0.154 Sum_probs=69.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|+||+.++++|++++ ++|++.+|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 23 k~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~ 94 (277)
T 2rhc_B 23 EVALVTGATSGIGLEIARRLGKEG-------LRVFVCARGEEGLRTTLKELRE-AGVEADGRTCDVRSVPEIEALVAAVV 94 (277)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCceEEEECCCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 7999999999988877766631 12457789999999999999887
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 95 ~~~g~iD~lv~~Ag~~~ 111 (277)
T 2rhc_B 95 ERYGPVDVLVNNAGRPG 111 (277)
T ss_dssp HHTCSCSEEEECCCCCC
T ss_pred HHhCCCCEEEECCCCCC
Confidence 6899999999643
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.92 E-value=2.5e-09 Score=100.89 Aligned_cols=79 Identities=19% Similarity=0.143 Sum_probs=61.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|+||+.++++|++++ .+|++.+|+.+++++..++++ .++.++.+|++|+++++++++
T Consensus 8 k~~lVTGas~gIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~ 76 (257)
T 3tpc_A 8 RVFIVTGASSGLGAAVTRMLAQEG-------ATVLGLDLKPPAGEEPAAELG----AAVRFRNADVTNEADATAALAFAK 76 (257)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-------CEEEEEESSCC----------------CEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEeCChHHHHHHHHHhC----CceEEEEccCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 799999999998877776653 467889999999999999887
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 77 ~~~g~id~lv~nAg~~~ 93 (257)
T 3tpc_A 77 QEFGHVHGLVNCAGTAP 93 (257)
T ss_dssp HHHSCCCEEEECCCCCC
T ss_pred HHcCCCCEEEECCCCCC
Confidence 7899999999753
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=98.92 E-value=6.4e-10 Score=110.73 Aligned_cols=103 Identities=14% Similarity=0.109 Sum_probs=80.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
++|+|+|||||+|++++++|++++. ++|.+++|+.++.. +.+. ...++.++.+|++|++++.++++++|
T Consensus 33 ~~ilVtGatG~iG~~l~~~L~~~g~------~~V~~~~r~~~~~~---~~l~--~~~~v~~~~~Dl~d~~~l~~~~~~~d 101 (377)
T 2q1s_A 33 TNVMVVGGAGFVGSNLVKRLLELGV------NQVHVVDNLLSAEK---INVP--DHPAVRFSETSITDDALLASLQDEYD 101 (377)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC------SEEEEECCCTTCCG---GGSC--CCTTEEEECSCTTCHHHHHHCCSCCS
T ss_pred CEEEEECCccHHHHHHHHHHHHcCC------ceEEEEECCCCCch---hhcc--CCCceEEEECCCCCHHHHHHHhhCCC
Confidence 5799999999999999999999862 68999999865431 1111 13467889999999999999999999
Q ss_pred eeEeccCCCCCC----------------cHHHHHHHHHc-CC-cEEecCCcH
Q 014694 91 LLLNCVGPYRLH----------------GDPVAAACVHS-GC-DYLDISGEP 124 (420)
Q Consensus 91 vVIn~aGp~~~~----------------~~~vv~Ac~~~-g~-~yvdisge~ 124 (420)
+|||+||+.... ..+++++|.++ ++ ++|.+|...
T Consensus 102 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~ 153 (377)
T 2q1s_A 102 YVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGC 153 (377)
T ss_dssp EEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC-
T ss_pred EEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHH
Confidence 999999975321 26788999888 77 677777543
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.92 E-value=2.5e-09 Score=100.03 Aligned_cols=83 Identities=14% Similarity=0.091 Sum_probs=70.8
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc-
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~- 88 (420)
...++|+||+|+||+.++++|++++ .+|++.+|+.++++++.+++.. ...++.++.+|++|+++++++++.
T Consensus 5 ~k~vlITGas~gIG~~~a~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 76 (247)
T 3lyl_A 5 EKVALVTGASRGIGFEVAHALASKG-------ATVVGTATSQASAEKFENSMKE-KGFKARGLVLNISDIESIQNFFAEI 76 (247)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTT-------CEEEEEESSHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCceEEEEecCCCHHHHHHHHHHH
Confidence 3479999999999999999999998 7999999999988887776632 234678899999999999998874
Q ss_pred ------cCeeEeccCCCC
Q 014694 89 ------TKLLLNCVGPYR 100 (420)
Q Consensus 89 ------~dvVIn~aGp~~ 100 (420)
.|+|||+||...
T Consensus 77 ~~~~~~id~li~~Ag~~~ 94 (247)
T 3lyl_A 77 KAENLAIDILVNNAGITR 94 (247)
T ss_dssp HHTTCCCSEEEECCCCCC
T ss_pred HHHcCCCCEEEECCCCCC
Confidence 699999999753
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=98.92 E-value=2.8e-09 Score=100.68 Aligned_cols=81 Identities=11% Similarity=0.108 Sum_probs=69.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|+||+.++++|++++ ++|++.+|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 15 k~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~~~ 86 (260)
T 2zat_A 15 KVALVTASTDGIGLAIARRLAQDG-------AHVVVSSRKQENVDRTVATLQG-EGLSVTGTVCHVGKAEDRERLVAMAV 86 (260)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCceEEEEccCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 7999999999988777666531 12457788999999999998887
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
+.|+|||+||..
T Consensus 87 ~~~g~iD~lv~~Ag~~ 102 (260)
T 2zat_A 87 NLHGGVDILVSNAAVN 102 (260)
T ss_dssp HHHSCCCEEEECCCCC
T ss_pred HHcCCCCEEEECCCCC
Confidence 789999999964
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.92 E-value=4.8e-09 Score=107.97 Aligned_cols=107 Identities=15% Similarity=0.214 Sum_probs=88.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
.+|+|+|| |++|+.+++.|++.+. .+|.+++|+.++++++.+.. ++..+.+|+.|.+++.++++++|
T Consensus 24 k~VlIiGA-GgiG~aia~~L~~~~g------~~V~v~~R~~~ka~~la~~~------~~~~~~~D~~d~~~l~~~l~~~D 90 (467)
T 2axq_A 24 KNVLLLGS-GFVAQPVIDTLAANDD------INVTVACRTLANAQALAKPS------GSKAISLDVTDDSALDKVLADND 90 (467)
T ss_dssp EEEEEECC-STTHHHHHHHHHTSTT------EEEEEEESSHHHHHHHHGGG------TCEEEECCTTCHHHHHHHHHTSS
T ss_pred CEEEEECC-hHHHHHHHHHHHhCCC------CeEEEEECCHHHHHHHHHhc------CCcEEEEecCCHHHHHHHHcCCC
Confidence 47999998 9999999999998741 78999999999988776531 35667889999999999999999
Q ss_pred eeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHHHHHHHH
Q 014694 91 LLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEA 132 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~~~~~~~ 132 (420)
+||||+++... ..+.++|.+.|+||+|++...+....+.+
T Consensus 91 vVIn~tp~~~~--~~v~~a~l~~g~~vvd~~~~~p~~~~Ll~ 130 (467)
T 2axq_A 91 VVISLIPYTFH--PNVVKSAIRTKTDVVTSSYISPALRELEP 130 (467)
T ss_dssp EEEECSCGGGH--HHHHHHHHHHTCEEEECSCCCHHHHHHHH
T ss_pred EEEECCchhhh--HHHHHHHHhcCCEEEEeecCCHHHHHHHH
Confidence 99999987532 46889999999999999876666666554
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.92 E-value=4e-09 Score=99.90 Aligned_cols=81 Identities=16% Similarity=0.129 Sum_probs=69.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|+||+.++++|++++ ++|++.+|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~ 79 (262)
T 1zem_A 8 KVCLVTGAGGNIGLATALRLAEEG-------TAIALLDMNREALEKAEASVRE-KGVEARSYVCDVTSEEAVIGTVDSVV 79 (262)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHT-TTSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 7999999999998887776642 13457788999999999988876
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
+.|+|||+||..
T Consensus 80 ~~~g~id~lv~nAg~~ 95 (262)
T 1zem_A 80 RDFGKIDFLFNNAGYQ 95 (262)
T ss_dssp HHHSCCCEEEECCCCC
T ss_pred HHhCCCCEEEECCCCC
Confidence 689999999964
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.92 E-value=4.5e-09 Score=100.55 Aligned_cols=80 Identities=16% Similarity=0.195 Sum_probs=69.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|+||+.++++|++++ .+|++.+|+.++++++.+++.. ..++.++.+|++|+++++++++
T Consensus 30 k~vlVTGas~gIG~aia~~L~~~G-------~~V~~~~r~~~~~~~~~~~l~~--~~~~~~~~~Dv~d~~~v~~~~~~~~ 100 (276)
T 2b4q_A 30 RIALVTGGSRGIGQMIAQGLLEAG-------ARVFICARDAEACADTATRLSA--YGDCQAIPADLSSEAGARRLAQALG 100 (276)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEECSCHHHHHHHHHHHTT--SSCEEECCCCTTSHHHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh--cCceEEEEeeCCCHHHHHHHHHHHH
Confidence 469999999999999999999998 7999999999999888887752 2257778899999999998887
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
+.|+|||+||..
T Consensus 101 ~~~g~iD~lvnnAg~~ 116 (276)
T 2b4q_A 101 ELSARLDILVNNAGTS 116 (276)
T ss_dssp HHCSCCSEEEECCCCC
T ss_pred HhcCCCCEEEECCCCC
Confidence 689999999964
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=98.92 E-value=3.3e-09 Score=99.89 Aligned_cols=83 Identities=16% Similarity=0.154 Sum_probs=69.6
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeC--CCHHHHHHHHh
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADT--TDPPSLHRLCS 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~--~d~~sl~~~~~ 87 (420)
...++|+||+|+||+.+++.|++++ .+|++.+|+.++++++.+++......++.++.+|+ +|+++++++++
T Consensus 12 ~k~vlVTGas~gIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 84 (252)
T 3f1l_A 12 DRIILVTGASDGIGREAAMTYARYG-------ATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQ 84 (252)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHH
Confidence 3479999999999999999999998 79999999999988877665311123678899999 89999988876
Q ss_pred -------ccCeeEeccCCC
Q 014694 88 -------QTKLLLNCVGPY 99 (420)
Q Consensus 88 -------~~dvVIn~aGp~ 99 (420)
+.|+|||+||..
T Consensus 85 ~~~~~~g~id~lv~nAg~~ 103 (252)
T 3f1l_A 85 RIAVNYPRLDGVLHNAGLL 103 (252)
T ss_dssp HHHHHCSCCSEEEECCCCC
T ss_pred HHHHhCCCCCEEEECCccC
Confidence 689999999964
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=98.92 E-value=8.4e-10 Score=105.73 Aligned_cols=87 Identities=14% Similarity=0.254 Sum_probs=71.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~-- 88 (420)
|+|+|+|||||+|++++++|+ ++ ++|.+.+|+.. .+.+|+.|++++.+++++
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g-------~~V~~~~r~~~------------------~~~~D~~d~~~~~~~~~~~~ 54 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PV-------GNLIALDVHSK------------------EFCGDFSNPKGVAETVRKLR 54 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TT-------SEEEEECTTCS------------------SSCCCTTCHHHHHHHHHHHC
T ss_pred CeEEEECCCCHHHHHHHHHhh-cC-------CeEEEeccccc------------------cccccCCCHHHHHHHHHhcC
Confidence 479999999999999999999 76 79999999751 245799999999999987
Q ss_pred cCeeEeccCCCCCC----------------cHHHHHHHHHcCCcEEecCCc
Q 014694 89 TKLLLNCVGPYRLH----------------GDPVAAACVHSGCDYLDISGE 123 (420)
Q Consensus 89 ~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~~yvdisge 123 (420)
+|+|||++|..... ..+++++|.+.++++|.+|..
T Consensus 55 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~ 105 (299)
T 1n2s_A 55 PDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTD 105 (299)
T ss_dssp CSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTCEEEEEEEG
T ss_pred CCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEecc
Confidence 99999999975410 267888888888888877754
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.92 E-value=1.2e-08 Score=97.69 Aligned_cols=81 Identities=11% Similarity=0.139 Sum_probs=69.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..|+|+||+|+||+.+++.|++++ .+|++.+|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 45 k~vlITGasggIG~~la~~L~~~G-------~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~ 116 (285)
T 2c07_A 45 KVALVTGAGRGIGREIAKMLAKSV-------SHVICISRTQKSCDSVVDEIKS-FGYESSGYAGDVSKKEEISEVINKIL 116 (285)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTTS-------SEEEEEESSHHHHHHHHHHHHT-TTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHcC-------CEEEEEcCCHHHHHHHHHHHHh-cCCceeEEECCCCCHHHHHHHHHHHH
Confidence 479999999999999999999987 7899999999988887776632 13467789999999999999885
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
+.|+|||+||..
T Consensus 117 ~~~~~id~li~~Ag~~ 132 (285)
T 2c07_A 117 TEHKNVDILVNNAGIT 132 (285)
T ss_dssp HHCSCCCEEEECCCCC
T ss_pred HhcCCCCEEEECCCCC
Confidence 589999999965
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.92 E-value=5.2e-09 Score=100.03 Aligned_cols=83 Identities=12% Similarity=0.092 Sum_probs=70.2
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEec-------------ChhHHHHHHHHhCCCCCCCccEEEEeC
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-------------NPTRVKQALQWASPSHSLSIPILTADT 76 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagR-------------s~~kl~~~~~~l~~~~~~~~~~i~~D~ 76 (420)
...++|+||+|+||+.++++|++++ .+|++.+| +.++++++.+++.. ...++.++.+|+
T Consensus 15 gk~~lVTGas~gIG~a~a~~la~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv 86 (280)
T 3pgx_A 15 GRVAFITGAARGQGRSHAVRLAAEG-------ADIIACDICAPVSASVTYAPASPEDLDETARLVED-QGRKALTRVLDV 86 (280)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTT-------CEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHT-TTCCEEEEECCT
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeccccccccccccccCHHHHHHHHHHHHh-cCCeEEEEEcCC
Confidence 3479999999999999999999998 89999998 67788777766642 235677899999
Q ss_pred CCHHHHHHHHh-------ccCeeEeccCCCC
Q 014694 77 TDPPSLHRLCS-------QTKLLLNCVGPYR 100 (420)
Q Consensus 77 ~d~~sl~~~~~-------~~dvVIn~aGp~~ 100 (420)
+|+++++++++ +.|+|||+||...
T Consensus 87 ~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~ 117 (280)
T 3pgx_A 87 RDDAALRELVADGMEQFGRLDVVVANAGVLS 117 (280)
T ss_dssp TCHHHHHHHHHHHHHHHCCCCEEEECCCCCC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 99999999887 6899999999754
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.91 E-value=1.1e-09 Score=105.10 Aligned_cols=82 Identities=18% Similarity=0.217 Sum_probs=68.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|+||+.++++|++++ .+|++.+|+.++++++.+++.......+.++.+|++|+++++++++
T Consensus 34 k~~lVTGas~GIG~aia~~la~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 106 (281)
T 4dry_A 34 RIALVTGGGTGVGRGIAQALSAEG-------YSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVR 106 (281)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 469999999999999999999998 7999999999998887776631011234789999999999999887
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
+.|+|||+||..
T Consensus 107 ~~~g~iD~lvnnAG~~ 122 (281)
T 4dry_A 107 AEFARLDLLVNNAGSN 122 (281)
T ss_dssp HHHSCCSEEEECCCCC
T ss_pred HHcCCCCEEEECCCCC
Confidence 469999999964
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.91 E-value=4.3e-09 Score=100.28 Aligned_cols=78 Identities=21% Similarity=0.082 Sum_probs=70.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|+||+.++++|++++ .+|++.+|+.++++++.++++ .++.++.+|++|+++++++++
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~ 80 (271)
T 3tzq_B 12 KVAIITGACGGIGLETSRVLARAG-------ARVVLADLPETDLAGAAASVG----RGAVHHVVDLTNEVSVRALIDFTI 80 (271)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEECTTSCHHHHHHHHC----TTCEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEcCCHHHHHHHHHHhC----CCeEEEECCCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 799999999999988888774 467889999999999999987
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
+.|+|||+||..
T Consensus 81 ~~~g~id~lv~nAg~~ 96 (271)
T 3tzq_B 81 DTFGRLDIVDNNAAHS 96 (271)
T ss_dssp HHHSCCCEEEECCCCC
T ss_pred HHcCCCCEEEECCCCC
Confidence 689999999965
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=98.91 E-value=1.6e-09 Score=102.99 Aligned_cols=83 Identities=19% Similarity=0.232 Sum_probs=70.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|+||+.+++.|++++ .+|++.+|+.++++++.+++......++.++.+|++|+++++++++
T Consensus 21 k~vlVTGas~gIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 93 (266)
T 4egf_A 21 KRALITGATKGIGADIARAFAAAG-------ARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAA 93 (266)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 7999999999998887766531013467889999999999998876
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 94 ~~~g~id~lv~nAg~~~ 110 (266)
T 4egf_A 94 EAFGGLDVLVNNAGISH 110 (266)
T ss_dssp HHHTSCSEEEEECCCCC
T ss_pred HHcCCCCEEEECCCcCC
Confidence 6899999999754
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.91 E-value=3.7e-09 Score=101.32 Aligned_cols=80 Identities=20% Similarity=0.140 Sum_probs=67.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEec-ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagR-s~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..++|+||+|+||+.+++.|++++ .+|++.+| +.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 30 k~~lVTGas~GIG~aia~~la~~G-------~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~ 101 (280)
T 4da9_A 30 PVAIVTGGRRGIGLGIARALAASG-------FDIAITGIGDAEGVAPVIAELSG-LGARVIFLRADLADLSSHQATVDAV 101 (280)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCCHHHHHHHHHHHHH-TTCCEEEEECCTTSGGGHHHHHHHH
T ss_pred CEEEEecCCCHHHHHHHHHHHHCC-------CeEEEEeCCCHHHHHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHH
Confidence 469999999999999999999998 78999985 77888777766531 23467889999999999999887
Q ss_pred -----ccCeeEeccCC
Q 014694 88 -----QTKLLLNCVGP 98 (420)
Q Consensus 88 -----~~dvVIn~aGp 98 (420)
+.|+|||+||.
T Consensus 102 ~~~~g~iD~lvnnAg~ 117 (280)
T 4da9_A 102 VAEFGRIDCLVNNAGI 117 (280)
T ss_dssp HHHHSCCCEEEEECC-
T ss_pred HHHcCCCCEEEECCCc
Confidence 68999999996
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.91 E-value=8.7e-10 Score=105.11 Aligned_cols=84 Identities=21% Similarity=0.278 Sum_probs=71.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--c
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--Q 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--~ 88 (420)
|+|+|+|||||+|++++++|++++ ++|.+.+|. .+|+.|.+++.++++ +
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~~g-------~~V~~~~r~----------------------~~D~~d~~~~~~~~~~~~ 56 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNPEE-------YDIYPFDKK----------------------LLDITNISQVQQVVQEIR 56 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCTTT-------EEEEEECTT----------------------TSCTTCHHHHHHHHHHHC
T ss_pred eEEEEECCCCHHHHHHHHHHHhCC-------CEEEEeccc----------------------ccCCCCHHHHHHHHHhcC
Confidence 589999999999999999999987 899999982 158999999999998 6
Q ss_pred cCeeEeccCCCCCC----------------cHHHHHHHHHcCCcEEecCCc
Q 014694 89 TKLLLNCVGPYRLH----------------GDPVAAACVHSGCDYLDISGE 123 (420)
Q Consensus 89 ~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~~yvdisge 123 (420)
+|+|||+||..... ..+++++|.+.++++|.+|..
T Consensus 57 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~SS~ 107 (287)
T 3sc6_A 57 PHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGAKLVYISTD 107 (287)
T ss_dssp CSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEG
T ss_pred CCEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEchh
Confidence 99999999976421 157899999999988888754
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=98.91 E-value=4.7e-09 Score=99.07 Aligned_cols=82 Identities=12% Similarity=0.104 Sum_probs=69.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhH--HHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR--VKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~k--l~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
..++|+||+|+||+.++++|++++ .+|++.+|+.++ ++++.+++.. ...++.++.+|++|+++++++++
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~ 74 (258)
T 3a28_C 3 KVAMVTGGAQGIGRGISEKLAADG-------FDIAVADLPQQEEQAAETIKLIEA-ADQKAVFVGLDVTDKANFDSAIDE 74 (258)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHT-------CEEEEEECGGGHHHHHHHHHHHHT-TTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEeCCcchHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHH
Confidence 369999999999999999999998 799999999887 7777766632 13467789999999999999887
Q ss_pred ------ccCeeEeccCCCC
Q 014694 88 ------QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 75 ~~~~~g~iD~lv~nAg~~~ 93 (258)
T 3a28_C 75 AAEKLGGFDVLVNNAGIAQ 93 (258)
T ss_dssp HHHHHTCCCEEEECCCCCC
T ss_pred HHHHhCCCCEEEECCCCCC
Confidence 6899999999643
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=98.91 E-value=4.2e-09 Score=100.91 Aligned_cols=79 Identities=15% Similarity=0.061 Sum_probs=70.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|+||+.++++|++++ .+|++.+|+.++++++.++++ .++.++.+|++|+++++++++
T Consensus 30 k~vlVTGas~gIG~aia~~la~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~~ 98 (277)
T 3gvc_A 30 KVAIVTGAGAGIGLAVARRLADEG-------CHVLCADIDGDAADAAATKIG----CGAAACRVDVSDEQQIIAMVDACV 98 (277)
T ss_dssp CEEEETTTTSTHHHHHHHHHHHTT-------CEEEEEESSHHHHHHHHHHHC----SSCEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHcC----CcceEEEecCCCHHHHHHHHHHHH
Confidence 469999999999999999999998 899999999999988888774 467889999999999998877
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 99 ~~~g~iD~lvnnAg~~~ 115 (277)
T 3gvc_A 99 AAFGGVDKLVANAGVVH 115 (277)
T ss_dssp HHHSSCCEEEECCCCCC
T ss_pred HHcCCCCEEEECCCCCC
Confidence 6799999999753
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.90 E-value=4.2e-09 Score=99.24 Aligned_cols=83 Identities=18% Similarity=0.103 Sum_probs=70.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC--CCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--SHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~--~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
..++|+||+|+||+.++++|++++ .+|++.+|+.++++++.+++.. ....++.++.+|++|+++++++++
T Consensus 8 k~~lVTGas~GIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 80 (250)
T 3nyw_A 8 GLAIITGASQGIGAVIAAGLATDG-------YRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKD 80 (250)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHT-------CEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHH
Confidence 479999999999999999999998 7999999999998887776532 012467889999999999999876
Q ss_pred ------ccCeeEeccCCCC
Q 014694 88 ------QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 81 ~~~~~g~iD~lvnnAg~~~ 99 (250)
T 3nyw_A 81 IHQKYGAVDILVNAAAMFM 99 (250)
T ss_dssp HHHHHCCEEEEEECCCCCC
T ss_pred HHHhcCCCCEEEECCCcCC
Confidence 5799999999753
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=98.90 E-value=4.8e-09 Score=100.96 Aligned_cols=82 Identities=17% Similarity=0.151 Sum_probs=68.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc-
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT- 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~- 89 (420)
..|+|+||+|++|++++++|++++ ++|++.+|+.++++++.+++......++.++.+|++|+++++++++++
T Consensus 27 k~vlITGasggiG~~la~~L~~~G-------~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 99 (302)
T 1w6u_A 27 KVAFITGGGTGLGKGMTTLLSSLG-------AQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELI 99 (302)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 799999999998877766652100246788999999999999988754
Q ss_pred ------CeeEeccCCC
Q 014694 90 ------KLLLNCVGPY 99 (420)
Q Consensus 90 ------dvVIn~aGp~ 99 (420)
|+|||+||..
T Consensus 100 ~~~g~id~li~~Ag~~ 115 (302)
T 1w6u_A 100 KVAGHPNIVINNAAGN 115 (302)
T ss_dssp HHTCSCSEEEECCCCC
T ss_pred HHcCCCCEEEECCCCC
Confidence 9999999954
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.90 E-value=3.1e-09 Score=102.00 Aligned_cols=81 Identities=16% Similarity=0.079 Sum_probs=71.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|+||+.++++|++++ .+|++.+|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 9 k~vlVTGas~GIG~aia~~la~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~ 80 (280)
T 3tox_A 9 KIAIVTGASSGIGRAAALLFAREG-------AKVVVTARNGNALAELTDEIAG-GGGEAAALAGDVGDEALHEALVELAV 80 (280)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTT-------CEEEECCSCHHHHHHHHHHHTT-TTCCEEECCCCTTCHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHh-cCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 7999999999999998888752 23567788999999999999887
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
+.|+|||+||..
T Consensus 81 ~~~g~iD~lvnnAg~~ 96 (280)
T 3tox_A 81 RRFGGLDTAFNNAGAL 96 (280)
T ss_dssp HHHSCCCEEEECCCCC
T ss_pred HHcCCCCEEEECCCCC
Confidence 689999999965
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=98.90 E-value=6.8e-09 Score=97.78 Aligned_cols=79 Identities=18% Similarity=0.193 Sum_probs=64.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|+||+.++++|++++ .+|++.+|+.+ ++..+++.. ...++.++.+|++|+++++++++
T Consensus 5 k~vlVTGas~giG~~ia~~l~~~G-------~~V~~~~r~~~--~~~~~~l~~-~~~~~~~~~~D~~~~~~v~~~~~~~~ 74 (255)
T 2q2v_A 5 KTALVTGSTSGIGLGIAQVLARAG-------ANIVLNGFGDP--APALAEIAR-HGVKAVHHPADLSDVAQIEALFALAE 74 (255)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTT-------CEEEEECSSCC--HHHHHHHHT-TSCCEEEECCCTTSHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEeCCch--HHHHHHHHh-cCCceEEEeCCCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 79999999876 334444421 12456778899999999999987
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
+.|+|||+||..
T Consensus 75 ~~~g~id~lv~~Ag~~ 90 (255)
T 2q2v_A 75 REFGGVDILVNNAGIQ 90 (255)
T ss_dssp HHHSSCSEEEECCCCC
T ss_pred HHcCCCCEEEECCCCC
Confidence 789999999964
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=98.90 E-value=3.4e-09 Score=103.66 Aligned_cols=82 Identities=16% Similarity=0.144 Sum_probs=69.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~-~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..|+|+||+|+||++++++|++++ ++|++++|+.++++++.+++.. ....++.++.+|++|+++++++++
T Consensus 9 k~vlVTGas~gIG~~la~~l~~~G-------~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 81 (319)
T 3ioy_A 9 RTAFVTGGANGVGIGLVRQLLNQG-------CKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEV 81 (319)
T ss_dssp CEEEEETTTSTHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHH
T ss_pred CEEEEcCCchHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 479999999999999999999998 8999999999998888776631 011257789999999999999887
Q ss_pred -----ccCeeEeccCCC
Q 014694 88 -----QTKLLLNCVGPY 99 (420)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (420)
+.|+|||+||..
T Consensus 82 ~~~~g~id~lv~nAg~~ 98 (319)
T 3ioy_A 82 EARFGPVSILCNNAGVN 98 (319)
T ss_dssp HHHTCCEEEEEECCCCC
T ss_pred HHhCCCCCEEEECCCcC
Confidence 459999999954
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.90 E-value=5.7e-09 Score=97.47 Aligned_cols=84 Identities=14% Similarity=0.103 Sum_probs=69.5
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeC--CCHHHHHHHH
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADT--TDPPSLHRLC 86 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~--~d~~sl~~~~ 86 (420)
+...++|+||+|++|+.++++|++++ .+|++.+|+.++++++.+++......+..++.+|+ .|.+++++++
T Consensus 13 ~~k~vlITGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~ 85 (247)
T 3i1j_A 13 KGRVILVTGAARGIGAAAARAYAAHG-------ASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELA 85 (247)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCC-------CEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHH
Confidence 34579999999999999999999998 79999999999998887766421224567788888 8999888887
Q ss_pred h-------ccCeeEeccCCC
Q 014694 87 S-------QTKLLLNCVGPY 99 (420)
Q Consensus 87 ~-------~~dvVIn~aGp~ 99 (420)
+ +.|+|||+||..
T Consensus 86 ~~~~~~~g~id~lv~nAg~~ 105 (247)
T 3i1j_A 86 ARVEHEFGRLDGLLHNASII 105 (247)
T ss_dssp HHHHHHHSCCSEEEECCCCC
T ss_pred HHHHHhCCCCCEEEECCccC
Confidence 6 679999999964
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=98.90 E-value=4.4e-09 Score=100.63 Aligned_cols=81 Identities=21% Similarity=0.255 Sum_probs=69.4
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCC--CCCCccEEEEeCCCHHHHHHHHh-
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS--HSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~--~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
..++|+||+|+||++++++|++++ .+|++.+|+.++++++.+++... ...++.++.+|++|+++++++++
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 84 (281)
T 3svt_A 12 RTYLVTGGGSGIGKGVAAGLVAAG-------ASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDA 84 (281)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHH
Confidence 479999999999999999999998 79999999999998888777421 11257789999999999999887
Q ss_pred ------ccCeeEeccCC
Q 014694 88 ------QTKLLLNCVGP 98 (420)
Q Consensus 88 ------~~dvVIn~aGp 98 (420)
+.|+|||+||.
T Consensus 85 ~~~~~g~id~lv~nAg~ 101 (281)
T 3svt_A 85 VTAWHGRLHGVVHCAGG 101 (281)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHcCCCCEEEECCCc
Confidence 46999999996
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.90 E-value=3.7e-09 Score=101.89 Aligned_cols=82 Identities=21% Similarity=0.270 Sum_probs=69.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC----CCCCCccEEEEeCCCHHHHHHHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP----SHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~----~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
..|+|+||+|++|++++++|++++ ++|++.+|+.++++++.+++.. ....++.++.+|++|++++++++
T Consensus 19 k~vlVTGasggIG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~ 91 (303)
T 1yxm_A 19 QVAIVTGGATGIGKAIVKELLELG-------SNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLV 91 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHH
Confidence 479999999999999999999998 7999999999988877766521 01346788999999999999988
Q ss_pred hc-------cCeeEeccCCC
Q 014694 87 SQ-------TKLLLNCVGPY 99 (420)
Q Consensus 87 ~~-------~dvVIn~aGp~ 99 (420)
+. .|+|||+||..
T Consensus 92 ~~~~~~~g~id~li~~Ag~~ 111 (303)
T 1yxm_A 92 KSTLDTFGKINFLVNNGGGQ 111 (303)
T ss_dssp HHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHcCCCCEEEECCCCC
Confidence 74 89999999954
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=98.89 E-value=4.8e-09 Score=99.10 Aligned_cols=79 Identities=20% Similarity=0.202 Sum_probs=70.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|+||+.++++|++++ .+|++.+|+.++++++.++++ .++.++.+|++|+++++++++
T Consensus 9 k~~lVTGas~gIG~a~a~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~ 77 (255)
T 4eso_A 9 KKAIVIGGTHGMGLATVRRLVEGG-------AEVLLTGRNESNIARIREEFG----PRVHALRSDIADLNEIAVLGAAAG 77 (255)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHG----GGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhC----CcceEEEccCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 799999999999988888774 467889999999999998876
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 78 ~~~g~id~lv~nAg~~~ 94 (255)
T 4eso_A 78 QTLGAIDLLHINAGVSE 94 (255)
T ss_dssp HHHSSEEEEEECCCCCC
T ss_pred HHhCCCCEEEECCCCCC
Confidence 5799999999653
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.89 E-value=4.8e-09 Score=99.97 Aligned_cols=82 Identities=18% Similarity=0.181 Sum_probs=69.5
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH---
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC--- 86 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~--- 86 (420)
...++|+||+|+||+.++++|++++ ++|++.+|+.++++++.+++.. ...++.++.+|++|++++++++
T Consensus 21 ~k~vlVTGas~gIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 92 (273)
T 1ae1_A 21 GTTALVTGGSKGIGYAIVEELAGLG-------ARVYTCSRNEKELDECLEIWRE-KGLNVEGSVCDLLSRTERDKLMQTV 92 (273)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCcchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCceEEEECCCCCHHHHHHHHHHH
Confidence 3479999999999999999999998 7999999999988877766531 1246778999999999999887
Q ss_pred -----hccCeeEeccCCC
Q 014694 87 -----SQTKLLLNCVGPY 99 (420)
Q Consensus 87 -----~~~dvVIn~aGp~ 99 (420)
.+.|+|||+||..
T Consensus 93 ~~~~~g~id~lv~nAg~~ 110 (273)
T 1ae1_A 93 AHVFDGKLNILVNNAGVV 110 (273)
T ss_dssp HHHTTSCCCEEEECCCCC
T ss_pred HHHcCCCCcEEEECCCCC
Confidence 4689999999964
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.89 E-value=5.8e-09 Score=97.84 Aligned_cols=77 Identities=19% Similarity=0.169 Sum_probs=67.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~-- 88 (420)
..++|+||+|+||+.++++|++++ ++|++.+|+.++++++.+++ .+.++.+|++|++++++++++
T Consensus 6 k~vlVTGas~giG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~~~~~ 72 (245)
T 1uls_A 6 KAVLITGAAHGIGRATLELFAKEG-------ARLVACDIEEGPLREAAEAV------GAHPVVMDVADPASVERGFAEAL 72 (245)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHTT------TCEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHc------CCEEEEecCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 89999999999988776644 267889999999999998874
Q ss_pred -----cCeeEeccCCCC
Q 014694 89 -----TKLLLNCVGPYR 100 (420)
Q Consensus 89 -----~dvVIn~aGp~~ 100 (420)
.|+|||+||...
T Consensus 73 ~~~g~id~lvn~Ag~~~ 89 (245)
T 1uls_A 73 AHLGRLDGVVHYAGITR 89 (245)
T ss_dssp HHHSSCCEEEECCCCCC
T ss_pred HHcCCCCEEEECCCCCC
Confidence 799999999643
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=98.89 E-value=3.2e-09 Score=101.51 Aligned_cols=82 Identities=18% Similarity=0.196 Sum_probs=69.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|+||+.++++|++++ .+|++.+|+.+++++..+++......++.++.+|++|+++++++++
T Consensus 28 k~~lVTGas~GIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 100 (277)
T 4fc7_A 28 KVAFITGGGSGIGFRIAEIFMRHG-------CHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQAL 100 (277)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT-------CEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 469999999999999999999998 7999999999988777766521012467889999999999999887
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
+.|+|||+||..
T Consensus 101 ~~~g~id~lv~nAg~~ 116 (277)
T 4fc7_A 101 KEFGRIDILINCAAGN 116 (277)
T ss_dssp HHHSCCCEEEECCCCC
T ss_pred HHcCCCCEEEECCcCC
Confidence 689999999954
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.89 E-value=4.5e-09 Score=100.47 Aligned_cols=81 Identities=20% Similarity=0.247 Sum_probs=69.4
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCC---CccEEEEeCCCHHHHHHHHh
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSL---SIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~---~~~~i~~D~~d~~sl~~~~~ 87 (420)
..++|+||+|+||+.++++|++++ ++|++.+|+.++++++.+++.. ... ++.++.+|++|+++++++++
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dv~~~~~v~~~~~ 78 (280)
T 1xkq_A 7 KTVIITGSSNGIGRTTAILFAQEG-------ANVTITGRSSERLEETRQIILK-SGVSEKQVNSVVADVTTEDGQDQIIN 78 (280)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHT-TTCCGGGEEEEECCTTSHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHH-cCCCCcceEEEEecCCCHHHHHHHHH
Confidence 479999999999999999999998 7999999999998887776632 112 57789999999999998877
Q ss_pred -------ccCeeEeccCCC
Q 014694 88 -------QTKLLLNCVGPY 99 (420)
Q Consensus 88 -------~~dvVIn~aGp~ 99 (420)
+.|+|||+||..
T Consensus 79 ~~~~~~g~iD~lv~nAg~~ 97 (280)
T 1xkq_A 79 STLKQFGKIDVLVNNAGAA 97 (280)
T ss_dssp HHHHHHSCCCEEEECCCCC
T ss_pred HHHHhcCCCCEEEECCCCC
Confidence 589999999964
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=98.89 E-value=8.4e-09 Score=98.15 Aligned_cols=76 Identities=22% Similarity=0.180 Sum_probs=65.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|+||+.++++|++++ .+|++.+|+.++++++ . ..++.++.+|++|.++++++++
T Consensus 17 k~vlVTGas~gIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~----~---~~~~~~~~~Dv~d~~~v~~~~~~~~ 82 (266)
T 3p19_A 17 KLVVITGASSGIGEAIARRFSEEG-------HPLLLLARRVERLKAL----N---LPNTLCAQVDVTDKYTFDTAITRAE 82 (266)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-------CCEEEEESCHHHHHTT----C---CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHh----h---cCCceEEEecCCCHHHHHHHHHHHH
Confidence 469999999999999999999998 7899999998887543 1 2357789999999999999887
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 83 ~~~g~iD~lvnnAg~~~ 99 (266)
T 3p19_A 83 KIYGPADAIVNNAGMML 99 (266)
T ss_dssp HHHCSEEEEEECCCCCC
T ss_pred HHCCCCCEEEECCCcCC
Confidence 6899999999653
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.89 E-value=5.8e-09 Score=100.04 Aligned_cols=83 Identities=19% Similarity=0.230 Sum_probs=69.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEec-ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagR-s~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..++|+||+|+||+.++++|++++ .+|++.+| +.++++++.+++......++.++.+|++|+++++++++
T Consensus 26 k~~lVTGas~GIG~~ia~~la~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 98 (281)
T 3v2h_A 26 KTAVITGSTSGIGLAIARTLAKAG-------ANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMV 98 (281)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTT-------CEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHH
Confidence 469999999999999999999998 79999999 66777777776642123467788999999999999887
Q ss_pred -----ccCeeEeccCCCC
Q 014694 88 -----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 99 ~~~~g~iD~lv~nAg~~~ 116 (281)
T 3v2h_A 99 ADRFGGADILVNNAGVQF 116 (281)
T ss_dssp HHHTSSCSEEEECCCCCC
T ss_pred HHHCCCCCEEEECCCCCC
Confidence 6799999999753
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=98.88 E-value=3.3e-09 Score=101.07 Aligned_cols=81 Identities=16% Similarity=0.108 Sum_probs=66.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~-- 88 (420)
..|+|+||+|+||++++++|++++ ++|++.+|+.++++++.+.+.. ...++.++.+|++|++++++++++
T Consensus 35 k~vlITGasggIG~~la~~L~~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~ 106 (279)
T 3ctm_A 35 KVASVTGSSGGIGWAVAEAYAQAG-------ADVAIWYNSHPADEKAEHLQKT-YGVHSKAYKCNISDPKSVEETISQQE 106 (279)
T ss_dssp CEEEETTTTSSHHHHHHHHHHHHT-------CEEEEEESSSCCHHHHHHHHHH-HCSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCcceEEEeecCCHHHHHHHHHHHH
Confidence 479999999999999999999998 7999999998776655544320 123578899999999999998875
Q ss_pred -----cCeeEeccCCC
Q 014694 89 -----TKLLLNCVGPY 99 (420)
Q Consensus 89 -----~dvVIn~aGp~ 99 (420)
.|+|||+||..
T Consensus 107 ~~~g~id~li~~Ag~~ 122 (279)
T 3ctm_A 107 KDFGTIDVFVANAGVT 122 (279)
T ss_dssp HHHSCCSEEEECGGGS
T ss_pred HHhCCCCEEEECCccc
Confidence 89999999964
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=98.88 E-value=1.4e-08 Score=96.02 Aligned_cols=77 Identities=17% Similarity=0.210 Sum_probs=67.7
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh----
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~---- 87 (420)
.||||||++.||+.+++.|+++| .+|++.+|++++++++.++. .++..+.+|++|+++++++++
T Consensus 4 ~vlVTGas~GIG~aia~~la~~G-------a~V~~~~~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~v~~~~~ 71 (247)
T 3ged_A 4 GVIVTGGGHGIGKQICLDFLEAG-------DKVCFIDIDEKRSADFAKER-----PNLFYFHGDVADPLTLKKFVEYAME 71 (247)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHTTC-----TTEEEEECCTTSHHHHHHHHHHHHH
T ss_pred EEEEecCCCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHhc-----CCEEEEEecCCCHHHHHHHHHHHHH
Confidence 69999999999999999999998 89999999999987776543 467789999999999999876
Q ss_pred ---ccCeeEeccCCCC
Q 014694 88 ---QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ---~~dvVIn~aGp~~ 100 (420)
+.|++||+||...
T Consensus 72 ~~g~iDiLVNNAG~~~ 87 (247)
T 3ged_A 72 KLQRIDVLVNNACRGS 87 (247)
T ss_dssp HHSCCCEEEECCCCCC
T ss_pred HcCCCCEEEECCCCCC
Confidence 5799999998654
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.88 E-value=7.5e-09 Score=98.89 Aligned_cols=83 Identities=11% Similarity=0.015 Sum_probs=68.7
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC------------hhHHHHHHHHhCCCCCCCccEEEEeCC
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN------------PTRVKQALQWASPSHSLSIPILTADTT 77 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs------------~~kl~~~~~~l~~~~~~~~~~i~~D~~ 77 (420)
...++|+||+|+||+.+++.|++++ .+|++.+|+ .+++++...++.. ...++.++.+|++
T Consensus 10 gk~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~ 81 (287)
T 3pxx_A 10 DKVVLVTGGARGQGRSHAVKLAEEG-------ADIILFDICHDIETNEYPLATSRDLEEAGLEVEK-TGRKAYTAEVDVR 81 (287)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHH-TTSCEEEEECCTT
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCC-------CeEEEEcccccccccccchhhhHHHHHHHHHHHh-cCCceEEEEccCC
Confidence 3479999999999999999999998 799999997 6666666554421 2356788999999
Q ss_pred CHHHHHHHHh-------ccCeeEeccCCCC
Q 014694 78 DPPSLHRLCS-------QTKLLLNCVGPYR 100 (420)
Q Consensus 78 d~~sl~~~~~-------~~dvVIn~aGp~~ 100 (420)
|+++++++++ +.|+|||+||...
T Consensus 82 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~ 111 (287)
T 3pxx_A 82 DRAAVSRELANAVAEFGKLDVVVANAGICP 111 (287)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCcCc
Confidence 9999999887 6899999999753
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.88 E-value=4.6e-09 Score=100.41 Aligned_cols=81 Identities=23% Similarity=0.198 Sum_probs=70.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc-
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT- 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~- 89 (420)
..++|+||+|+||+.++++|++++ ++|++.+|+.++++++.+++.. ..++.++.+|++|+++++++++++
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G-------~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~ 92 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAG-------WSLVLTGRREERLQALAGELSA--KTRVLPLTLDVRDRAAMSAAVDNLP 92 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHTT--TSCEEEEECCTTCHHHHHHHHHTCC
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHhhc--CCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 469999999999999999999998 8999999999999888887742 146778999999999999998864
Q ss_pred ------CeeEeccCCCC
Q 014694 90 ------KLLLNCVGPYR 100 (420)
Q Consensus 90 ------dvVIn~aGp~~ 100 (420)
|+|||+||...
T Consensus 93 ~~~g~iD~lvnnAG~~~ 109 (272)
T 2nwq_A 93 EEFATLRGLINNAGLAL 109 (272)
T ss_dssp GGGSSCCEEEECCCCCC
T ss_pred HHhCCCCEEEECCCCCC
Confidence 99999999643
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=98.88 E-value=5.2e-09 Score=99.79 Aligned_cols=83 Identities=14% Similarity=0.050 Sum_probs=68.8
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC------------hhHHHHHHHHhCCCCCCCccEEEEeCC
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN------------PTRVKQALQWASPSHSLSIPILTADTT 77 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs------------~~kl~~~~~~l~~~~~~~~~~i~~D~~ 77 (420)
...++|+||+|+||+.+++.|++++ .+|++.+|+ .+++++..+.+.. ...++.++.+|++
T Consensus 13 gk~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~ 84 (278)
T 3sx2_A 13 GKVAFITGAARGQGRAHAVRLAADG-------ADIIAVDLCDQIASVPYPLATPEELAATVKLVED-IGSRIVARQADVR 84 (278)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTT-------CEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHH-HTCCEEEEECCTT
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC-------CeEEEEecccccccccccccchHHHHHHHHHHHh-cCCeEEEEeCCCC
Confidence 3479999999999999999999998 899999987 6677666554421 1346788999999
Q ss_pred CHHHHHHHHh-------ccCeeEeccCCCC
Q 014694 78 DPPSLHRLCS-------QTKLLLNCVGPYR 100 (420)
Q Consensus 78 d~~sl~~~~~-------~~dvVIn~aGp~~ 100 (420)
|+++++++++ +.|+|||+||...
T Consensus 85 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~ 114 (278)
T 3sx2_A 85 DRESLSAALQAGLDELGRLDIVVANAGIAP 114 (278)
T ss_dssp CHHHHHHHHHHHHHHHCCCCEEEECCCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 9999999887 6899999999754
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=98.88 E-value=8.6e-09 Score=97.90 Aligned_cols=83 Identities=13% Similarity=0.222 Sum_probs=70.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~-~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..++|+||+|+||+.++++|++++ .+|++.+|+.+++++..+++.. .....+..+.+|++|+++++++++
T Consensus 11 k~~lVTGas~gIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 83 (267)
T 3t4x_A 11 KTALVTGSTAGIGKAIATSLVAEG-------ANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKY 83 (267)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTT-------CEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhc
Confidence 479999999999999999999998 7999999999998887776632 012346678899999999999887
Q ss_pred -ccCeeEeccCCCC
Q 014694 88 -QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 84 g~id~lv~nAg~~~ 97 (267)
T 3t4x_A 84 PKVDILINNLGIFE 97 (267)
T ss_dssp CCCSEEEECCCCCC
T ss_pred CCCCEEEECCCCCC
Confidence 6899999999754
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=98.88 E-value=3.9e-09 Score=100.74 Aligned_cols=82 Identities=15% Similarity=0.053 Sum_probs=70.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|+||+.+++.|++++ .+|++.+|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~ 100 (270)
T 3ftp_A 29 QVAIVTGASRGIGRAIALELARRG-------AMVIGTATTEAGAEGIGAAFKQ-AGLEGRGAVLNVNDATAVDALVESTL 100 (270)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTT-------CEEEEEESSHHHHHHHHHHHHH-HTCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEEeCCCHHHHHHHHHHHH
Confidence 469999999999999999999998 7999999999988877766531 12467889999999999999887
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 101 ~~~g~iD~lvnnAg~~~ 117 (270)
T 3ftp_A 101 KEFGALNVLVNNAGITQ 117 (270)
T ss_dssp HHHSCCCEEEECCCCCC
T ss_pred HHcCCCCEEEECCCCCC
Confidence 6899999999643
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.88 E-value=1.1e-08 Score=96.34 Aligned_cols=80 Identities=18% Similarity=0.159 Sum_probs=69.4
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh----
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~---- 87 (420)
.++|+||+|+||+.++++|++++. ...|++.+|+.++++++.++++ .++.++.+|++|+++++++++
T Consensus 4 ~~lVTGas~GIG~aia~~l~~~g~-----~~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~ 74 (254)
T 3kzv_A 4 VILVTGVSRGIGKSIVDVLFSLDK-----DTVVYGVARSEAPLKKLKEKYG----DRFFYVVGDITEDSVLKQLVNAAVK 74 (254)
T ss_dssp EEEECSTTSHHHHHHHHHHHHHCS-----SCEEEEEESCHHHHHHHHHHHG----GGEEEEESCTTSHHHHHHHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHHhcCC-----CeEEEEecCCHHHHHHHHHHhC----CceEEEECCCCCHHHHHHHHHHHHH
Confidence 699999999999999999999862 1789999999999988887763 467889999999999999887
Q ss_pred ---ccCeeEeccCCCC
Q 014694 88 ---QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ---~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 75 ~~g~id~lvnnAg~~~ 90 (254)
T 3kzv_A 75 GHGKIDSLVANAGVLE 90 (254)
T ss_dssp HHSCCCEEEEECCCCC
T ss_pred hcCCccEEEECCcccC
Confidence 6799999999743
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.87 E-value=1.6e-09 Score=104.73 Aligned_cols=97 Identities=11% Similarity=0.132 Sum_probs=75.1
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccCe
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKL 91 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~dv 91 (420)
+|+|+|||||||++++++|++++ ..+++..|+..+.+. + ...+.++.+|++| +++.++++++|+
T Consensus 3 ~vlVTGatG~iG~~l~~~L~~~g-------~~v~~~~~~~~~~~~----~----~~~~~~~~~Dl~~-~~~~~~~~~~d~ 66 (313)
T 3ehe_A 3 LIVVTGGAGFIGSHVVDKLSESN-------EIVVIDNLSSGNEEF----V----NEAARLVKADLAA-DDIKDYLKGAEE 66 (313)
T ss_dssp CEEEETTTSHHHHHHHHHHTTTS-------CEEEECCCSSCCGGG----S----CTTEEEECCCTTT-SCCHHHHTTCSE
T ss_pred EEEEECCCchHHHHHHHHHHhCC-------CEEEEEcCCCCChhh----c----CCCcEEEECcCCh-HHHHHHhcCCCE
Confidence 69999999999999999999887 456665555443321 1 2457889999999 999999999999
Q ss_pred eEeccCCCCCC----------------cHHHHHHHHHcCC-cEEecCCcH
Q 014694 92 LLNCVGPYRLH----------------GDPVAAACVHSGC-DYLDISGEP 124 (420)
Q Consensus 92 VIn~aGp~~~~----------------~~~vv~Ac~~~g~-~yvdisge~ 124 (420)
|||+|+..... ..+++++|.++++ ++|.+|...
T Consensus 67 vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~ 116 (313)
T 3ehe_A 67 VWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTST 116 (313)
T ss_dssp EEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGG
T ss_pred EEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchH
Confidence 99999953211 1568899999887 688887643
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=5.1e-09 Score=99.67 Aligned_cols=82 Identities=11% Similarity=0.095 Sum_probs=68.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEec-ChhHHHHHHHHhCCCCCCCccEEEEeCCCH----HHHHHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-NPTRVKQALQWASPSHSLSIPILTADTTDP----PSLHRL 85 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagR-s~~kl~~~~~~l~~~~~~~~~~i~~D~~d~----~sl~~~ 85 (420)
..++|+||+|+||+.++++|++++ ++|++.+| +.++++++.+++......++.++.+|++|+ ++++++
T Consensus 12 k~~lVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 84 (276)
T 1mxh_A 12 PAAVITGGARRIGHSIAVRLHQQG-------FRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDI 84 (276)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTT-------CEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHH
Confidence 479999999999999999999998 79999999 988888777665210024677899999999 888888
Q ss_pred Hh-------ccCeeEeccCCC
Q 014694 86 CS-------QTKLLLNCVGPY 99 (420)
Q Consensus 86 ~~-------~~dvVIn~aGp~ 99 (420)
++ +.|+|||+||..
T Consensus 85 ~~~~~~~~g~id~lv~nAg~~ 105 (276)
T 1mxh_A 85 IDCSFRAFGRCDVLVNNASAY 105 (276)
T ss_dssp HHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHhcCCCCEEEECCCCC
Confidence 76 689999999964
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=98.87 E-value=3e-09 Score=114.02 Aligned_cols=103 Identities=15% Similarity=0.135 Sum_probs=81.9
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHh-CCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHH-HHHHH
Q 014694 9 ELFDVIILGASGFTGKYVVREALKL-FNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPS-LHRLC 86 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~-~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~s-l~~~~ 86 (420)
+.++|+|+|||||+|++++++|++. + ++|++.+|+.++++.+. ...++.++.+|++|.++ +++++
T Consensus 314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g-------~~V~~~~r~~~~~~~~~------~~~~v~~v~~Dl~d~~~~~~~~~ 380 (660)
T 1z7e_A 314 RRTRVLILGVNGFIGNHLTERLLREDH-------YEVYGLDIGSDAISRFL------NHPHFHFVEGDISIHSEWIEYHV 380 (660)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHSSS-------EEEEEEESCCTTTGGGT------TCTTEEEEECCTTTCHHHHHHHH
T ss_pred cCceEEEEcCCcHHHHHHHHHHHhcCC-------CEEEEEEcCchhhhhhc------cCCceEEEECCCCCcHHHHHHhh
Confidence 4468999999999999999999997 5 89999999877653321 12467889999999765 78889
Q ss_pred hccCeeEeccCCCCCC----------------cHHHHHHHHHcCCcEEecCCcH
Q 014694 87 SQTKLLLNCVGPYRLH----------------GDPVAAACVHSGCDYLDISGEP 124 (420)
Q Consensus 87 ~~~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~~yvdisge~ 124 (420)
+++|+|||+||..... ..+++++|.+++.++|.+|...
T Consensus 381 ~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~r~V~~SS~~ 434 (660)
T 1z7e_A 381 KKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSE 434 (660)
T ss_dssp HHCSEEEECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGG
T ss_pred cCCCEEEECceecCccccccCHHHHHHhhhHHHHHHHHHHHHhCCEEEEEecHH
Confidence 9999999999965421 1578899998887788887643
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=4.1e-09 Score=103.66 Aligned_cols=102 Identities=14% Similarity=0.035 Sum_probs=77.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~-- 88 (420)
++|+|+|||||+|++++++|+++++.+ ..++|.+.+|+..+.. + ...++.++.+|++|++++.+++++
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~~~--~~~~V~~~~r~~~~~~-----~---~~~~~~~~~~Dl~d~~~~~~~~~~~~ 71 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEILPLADTPG--GPWKVYGVARRTRPAW-----H---EDNPINYVQCDISDPDDSQAKLSPLT 71 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHTTSTTCTT--CSEEEEEEESSCCCSC-----C---CSSCCEEEECCTTSHHHHHHHHTTCT
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCCC--CceEEEEEeCCCCccc-----c---ccCceEEEEeecCCHHHHHHHHhcCC
Confidence 579999999999999999999876100 1168999999876532 1 134678999999999999999998
Q ss_pred -cCeeEeccCCCCCC-----------cHHHHHHHHHc--CC-cEEecCC
Q 014694 89 -TKLLLNCVGPYRLH-----------GDPVAAACVHS--GC-DYLDISG 122 (420)
Q Consensus 89 -~dvVIn~aGp~~~~-----------~~~vv~Ac~~~--g~-~yvdisg 122 (420)
+|+||||||..... ..+++++|.+. ++ ++|..+|
T Consensus 72 ~~d~vih~a~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g 120 (364)
T 2v6g_A 72 DVTHVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTG 120 (364)
T ss_dssp TCCEEEECCCCCCSSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECC
T ss_pred CCCEEEECCCCCcchHHHHHHHhHHHHHHHHHHHHHhccccceEEeccC
Confidence 99999999975321 26788888887 56 4554344
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=98.87 E-value=6.6e-09 Score=106.56 Aligned_cols=107 Identities=15% Similarity=0.128 Sum_probs=85.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
.+|+|+| +|++|+.+++.|++.+ .+|++++|+.++++++.+.+ ..+..+.+|+.|.+++.++++++|
T Consensus 4 k~VlViG-aG~iG~~ia~~L~~~G-------~~V~v~~R~~~~a~~la~~~-----~~~~~~~~Dv~d~~~l~~~l~~~D 70 (450)
T 1ff9_A 4 KSVLMLG-SGFVTRPTLDVLTDSG-------IKVTVACRTLESAKKLSAGV-----QHSTPISLDVNDDAALDAEVAKHD 70 (450)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHTTT-------CEEEEEESSHHHHHHTTTTC-----TTEEEEECCTTCHHHHHHHHTTSS
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCc-------CEEEEEECCHHHHHHHHHhc-----CCceEEEeecCCHHHHHHHHcCCc
Confidence 4799998 7999999999999876 68999999998876654432 235678889999999999999999
Q ss_pred eeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHHHHHHHH
Q 014694 91 LLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEA 132 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~~~~~~~ 132 (420)
+||||+++... ..+.++|.+.|+||+|.+-..+....+++
T Consensus 71 vVIn~a~~~~~--~~i~~a~l~~g~~vvd~~~~~~~~~~l~~ 110 (450)
T 1ff9_A 71 LVISLIPYTFH--ATVIKSAIRQKKHVVTTSYVSPAMMELDQ 110 (450)
T ss_dssp EEEECCC--CH--HHHHHHHHHHTCEEEESSCCCHHHHHTHH
T ss_pred EEEECCccccc--hHHHHHHHhCCCeEEEeecccHHHHHHHH
Confidence 99999987432 35788999999999998765555566554
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=98.87 E-value=8.2e-09 Score=97.69 Aligned_cols=84 Identities=17% Similarity=0.137 Sum_probs=71.2
Q ss_pred cceEEEEcCCc-HHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 10 LFDVIILGASG-FTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 10 ~~~IvV~GATG-~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
...++|+||+| .+|+.++++|++++ .+|++.+|+.++++++.+++......++.++.+|++|+++++++++
T Consensus 22 ~k~vlITGasg~GIG~~~a~~l~~~G-------~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~ 94 (266)
T 3o38_A 22 GKVVLVTAAAGTGIGSTTARRALLEG-------ADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQ 94 (266)
T ss_dssp TCEEEESSCSSSSHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECCCCCchHHHHHHHHHHCC-------CEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHH
Confidence 34799999998 69999999999998 7999999999999888887742223478899999999999999887
Q ss_pred ------ccCeeEeccCCCC
Q 014694 88 ------QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 95 ~~~~~g~id~li~~Ag~~~ 113 (266)
T 3o38_A 95 TVEKAGRLDVLVNNAGLGG 113 (266)
T ss_dssp HHHHHSCCCEEEECCCCCC
T ss_pred HHHHhCCCcEEEECCCcCC
Confidence 5699999999643
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.86 E-value=4.7e-10 Score=102.11 Aligned_cols=92 Identities=16% Similarity=0.169 Sum_probs=71.4
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcc--eEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIK--SLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~--~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
.++|+|+||||++|++++++|++++ . +|.+++|+.++. ..++.++.+|++|++++.+++
T Consensus 5 ~~~vlVtGatG~iG~~l~~~l~~~g-------~~~~V~~~~r~~~~~-----------~~~~~~~~~D~~~~~~~~~~~- 65 (215)
T 2a35_A 5 PKRVLLAGATGLTGEHLLDRILSEP-------TLAKVIAPARKALAE-----------HPRLDNPVGPLAELLPQLDGS- 65 (215)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCT-------TCCEEECCBSSCCCC-----------CTTEECCBSCHHHHGGGCCSC-
T ss_pred CceEEEECCCcHHHHHHHHHHHhCC-------CCCeEEEEeCCCccc-----------CCCceEEeccccCHHHHHHhh-
Confidence 4689999999999999999999987 4 899999987650 235677889999998888877
Q ss_pred ccCeeEeccCCCCC--------------CcHHHHHHHHHcCC-cEEecC
Q 014694 88 QTKLLLNCVGPYRL--------------HGDPVAAACVHSGC-DYLDIS 121 (420)
Q Consensus 88 ~~dvVIn~aGp~~~--------------~~~~vv~Ac~~~g~-~yvdis 121 (420)
+|+||||+|+... ...+++++|.+.++ ++|.+|
T Consensus 66 -~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S 113 (215)
T 2a35_A 66 -IDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVS 113 (215)
T ss_dssp -CSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEC
T ss_pred -hcEEEECeeeccccCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEEC
Confidence 9999999997531 01456667766665 355554
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=98.86 E-value=4.4e-09 Score=98.04 Aligned_cols=82 Identities=15% Similarity=0.210 Sum_probs=65.6
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEE-ecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA-GRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~ia-gRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
...|+|+||+|++|+.++++|++++ ++|++. .|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 5 ~~~vlItGasggiG~~~a~~l~~~G-------~~V~~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~ 76 (247)
T 2hq1_A 5 GKTAIVTGSSRGLGKAIAWKLGNMG-------ANIVLNGSPASTSLDATAEEFKA-AGINVVVAKGDVKNPEDVENMVKT 76 (247)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTT-------CEEEEEECTTCSHHHHHHHHHHH-TTCCEEEEESCTTSHHHHHHHHHH
T ss_pred CcEEEEECCCchHHHHHHHHHHHCC-------CEEEEEcCcCHHHHHHHHHHHHh-cCCcEEEEECCCCCHHHHHHHHHH
Confidence 3579999999999999999999998 788888 6787777766655521 12467889999999999999887
Q ss_pred ------ccCeeEeccCCC
Q 014694 88 ------QTKLLLNCVGPY 99 (420)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (420)
+.|+|||+||..
T Consensus 77 ~~~~~~~~d~vi~~Ag~~ 94 (247)
T 2hq1_A 77 AMDAFGRIDILVNNAGIT 94 (247)
T ss_dssp HHHHHSCCCEEEECC---
T ss_pred HHHhcCCCCEEEECCCCC
Confidence 689999999964
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=98.86 E-value=6.8e-09 Score=99.51 Aligned_cols=79 Identities=13% Similarity=0.103 Sum_probs=69.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|+||+.++++|++++ .+|++.+|+.++++++.++++ .++.++.+|++|+++++++++
T Consensus 6 k~~lVTGas~GIG~aia~~la~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~ 74 (281)
T 3zv4_A 6 EVALITGGASGLGRALVDRFVAEG-------ARVAVLDKSAERLRELEVAHG----GNAVGVVGDVRSLQDQKRAAERCL 74 (281)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHTB----TTEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCc-------CEEEEEeCCHHHHHHHHHHcC----CcEEEEEcCCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 899999999999988877663 467889999999999998876
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 75 ~~~g~iD~lvnnAg~~~ 91 (281)
T 3zv4_A 75 AAFGKIDTLIPNAGIWD 91 (281)
T ss_dssp HHHSCCCEEECCCCCCC
T ss_pred HhcCCCCEEEECCCcCc
Confidence 4699999999643
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=98.86 E-value=8.1e-09 Score=97.96 Aligned_cols=82 Identities=17% Similarity=0.145 Sum_probs=69.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~-~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..++|+||+|+||+.++++|++++ .+|++.+|+.++++++.+++.. ....++.++.+|++|+++++++++
T Consensus 9 k~~lVTGas~GIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 81 (265)
T 3lf2_A 9 AVAVVTGGSSGIGLATVELLLEAG-------AAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEAC 81 (265)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHH
Confidence 479999999999999999999998 7999999999998887776631 112347889999999999998876
Q ss_pred -----ccCeeEeccCCC
Q 014694 88 -----QTKLLLNCVGPY 99 (420)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (420)
+.|+|||+||..
T Consensus 82 ~~~~g~id~lvnnAg~~ 98 (265)
T 3lf2_A 82 ERTLGCASILVNNAGQG 98 (265)
T ss_dssp HHHHCSCSEEEECCCCC
T ss_pred HHHcCCCCEEEECCCCC
Confidence 569999999964
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=98.86 E-value=7.1e-09 Score=98.63 Aligned_cols=83 Identities=16% Similarity=0.119 Sum_probs=67.4
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEec-ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagR-s~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
...|+|+||+|+||+.++++|++++ .+|++.+| +.+.++.+.+.+.. ...++.++.+|++|+++++++++
T Consensus 29 ~k~vlITGas~gIG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~ 100 (271)
T 4iin_A 29 GKNVLITGASKGIGAEIAKTLASMG-------LKVWINYRSNAEVADALKNELEE-KGYKAAVIKFDAASESDFIEAIQT 100 (271)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTT-------CEEEEEESSCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCCCHHHHHHHHHHHHh-cCCceEEEECCCCCHHHHHHHHHH
Confidence 3479999999999999999999998 79999999 45555555554421 23467889999999999999887
Q ss_pred ------ccCeeEeccCCCC
Q 014694 88 ------QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 101 ~~~~~g~id~li~nAg~~~ 119 (271)
T 4iin_A 101 IVQSDGGLSYLVNNAGVVR 119 (271)
T ss_dssp HHHHHSSCCEEEECCCCCC
T ss_pred HHHhcCCCCEEEECCCcCC
Confidence 6899999999754
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.85 E-value=9.4e-09 Score=98.23 Aligned_cols=83 Identities=11% Similarity=0.097 Sum_probs=68.2
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC------------hhHHHHHHHHhCCCCCCCccEEEEeCC
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN------------PTRVKQALQWASPSHSLSIPILTADTT 77 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs------------~~kl~~~~~~l~~~~~~~~~~i~~D~~ 77 (420)
...++|+||+|+||+.++++|++++ .+|++.+|+ .+++++..+.+.. ...++.++.+|++
T Consensus 10 ~k~~lVTGas~gIG~a~a~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~ 81 (281)
T 3s55_A 10 GKTALITGGARGMGRSHAVALAEAG-------ADIAICDRCENSDVVGYPLATADDLAETVALVEK-TGRRCISAKVDVK 81 (281)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHH-TTCCEEEEECCTT
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-------CeEEEEeCCccccccccccccHHHHHHHHHHHHh-cCCeEEEEeCCCC
Confidence 3579999999999999999999998 799999997 5566655554421 2346788999999
Q ss_pred CHHHHHHHHh-------ccCeeEeccCCCC
Q 014694 78 DPPSLHRLCS-------QTKLLLNCVGPYR 100 (420)
Q Consensus 78 d~~sl~~~~~-------~~dvVIn~aGp~~ 100 (420)
|+++++++++ +.|+|||+||...
T Consensus 82 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~ 111 (281)
T 3s55_A 82 DRAALESFVAEAEDTLGGIDIAITNAGIST 111 (281)
T ss_dssp CHHHHHHHHHHHHHHHTCCCEEEECCCCCC
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEECCCCCC
Confidence 9999999887 6899999999653
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=98.85 E-value=4.3e-09 Score=99.29 Aligned_cols=90 Identities=18% Similarity=0.139 Sum_probs=72.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~-- 88 (420)
|+|+|+|||||+|++++++|++ + ++|.+.+|+.+.. .+ +.+|++|++++.+++++
T Consensus 1 m~ilVtGatG~iG~~l~~~L~~-g-------~~V~~~~r~~~~~------------~~---~~~Dl~~~~~~~~~~~~~~ 57 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLSE-R-------HEVIKVYNSSEIQ------------GG---YKLDLTDFPRLEDFIIKKR 57 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHTT-T-------SCEEEEESSSCCT------------TC---EECCTTSHHHHHHHHHHHC
T ss_pred CEEEEECCCChhHHHHHHHHhc-C-------CeEEEecCCCcCC------------CC---ceeccCCHHHHHHHHHhcC
Confidence 4799999999999999999984 5 6899999986320 12 78999999999999986
Q ss_pred cCeeEeccCCCCCC----------------cHHHHHHHHHcCCcEEecCCc
Q 014694 89 TKLLLNCVGPYRLH----------------GDPVAAACVHSGCDYLDISGE 123 (420)
Q Consensus 89 ~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~~yvdisge 123 (420)
+|+||||+|..... ..+++++|.+.+.++|.+|..
T Consensus 58 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~iv~~SS~ 108 (273)
T 2ggs_A 58 PDVIINAAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVIDSYIVHISTD 108 (273)
T ss_dssp CSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEG
T ss_pred CCEEEECCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhCCeEEEEecc
Confidence 99999999975421 267788888877787777653
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=98.85 E-value=7.7e-09 Score=98.28 Aligned_cols=86 Identities=17% Similarity=0.159 Sum_probs=68.7
Q ss_pred CCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEe-cChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 014694 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAG-RNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 7 ~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iag-Rs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~ 85 (420)
+.....++|+||+|+||+.++++|++++ .+|++.+ |+.++++...+++.. ...++.++.+|++|+++++++
T Consensus 22 ~~~~k~vlITGas~gIG~~~a~~l~~~G-------~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~ 93 (269)
T 3gk3_A 22 MQAKRVAFVTGGMGGLGAAISRRLHDAG-------MAVAVSHSERNDHVSTWLMHERD-AGRDFKAYAVDVADFESCERC 93 (269)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHTTT-------CEEEEEECSCHHHHHHHHHHHHT-TTCCCEEEECCTTCHHHHHHH
T ss_pred hhcCCEEEEECCCchHHHHHHHHHHHCC-------CEEEEEcCCchHHHHHHHHHHHh-cCCceEEEEecCCCHHHHHHH
Confidence 3344579999999999999999999998 7898888 666666666655431 235688999999999999998
Q ss_pred Hh-------ccCeeEeccCCCC
Q 014694 86 CS-------QTKLLLNCVGPYR 100 (420)
Q Consensus 86 ~~-------~~dvVIn~aGp~~ 100 (420)
++ +.|+|||+||...
T Consensus 94 ~~~~~~~~g~id~li~nAg~~~ 115 (269)
T 3gk3_A 94 AEKVLADFGKVDVLINNAGITR 115 (269)
T ss_dssp HHHHHHHHSCCSEEEECCCCCC
T ss_pred HHHHHHHcCCCCEEEECCCcCC
Confidence 87 6899999999653
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.85 E-value=1.3e-08 Score=96.06 Aligned_cols=76 Identities=16% Similarity=0.185 Sum_probs=65.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|+||++++++|++++ ++|++.+|+.++ +++.+++. + .++.+|++|+++++++++
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~-~~~~~~~~-----~-~~~~~D~~~~~~~~~~~~~~~ 72 (256)
T 2d1y_A 7 KGVLVTGGARGIGRAIAQAFAREG-------ALVALCDLRPEG-KEVAEAIG-----G-AFFQVDLEDERERVRFVEEAA 72 (256)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESSTTH-HHHHHHHT-----C-EEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEeCChhH-HHHHHHhh-----C-CEEEeeCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 799999999888 67766662 3 778999999999998876
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 73 ~~~g~iD~lv~~Ag~~~ 89 (256)
T 2d1y_A 73 YALGRVDVLVNNAAIAA 89 (256)
T ss_dssp HHHSCCCEEEECCCCCC
T ss_pred HHcCCCCEEEECCCCCC
Confidence 5799999999653
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.84 E-value=1.1e-08 Score=96.24 Aligned_cols=86 Identities=15% Similarity=0.062 Sum_probs=67.5
Q ss_pred CCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEe-cChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 014694 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAG-RNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 7 ~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iag-Rs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~ 85 (420)
..+...|+|+||+|++|+.++++|++++ .+|++.+ |+.++.++..+++.. ...++.++.+|++|.++++++
T Consensus 10 ~~~~k~vlITGas~giG~~ia~~l~~~G-------~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~ 81 (256)
T 3ezl_A 10 VMSQRIAYVTGGMGGIGTSICQRLHKDG-------FRVVAGCGPNSPRRVKWLEDQKA-LGFDFYASEGNVGDWDSTKQA 81 (256)
T ss_dssp ---CEEEEETTTTSHHHHHHHHHHHHTT-------EEEEEEECTTCSSHHHHHHHHHH-TTCCCEEEECCTTCHHHHHHH
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCCHHHHHHHHHHHHh-cCCeeEEEecCCCCHHHHHHH
Confidence 3455679999999999999999999998 7888877 666666665554421 234678899999999999998
Q ss_pred Hh-------ccCeeEeccCCCC
Q 014694 86 CS-------QTKLLLNCVGPYR 100 (420)
Q Consensus 86 ~~-------~~dvVIn~aGp~~ 100 (420)
++ +.|+|||+||...
T Consensus 82 ~~~~~~~~g~id~lv~~Ag~~~ 103 (256)
T 3ezl_A 82 FDKVKAEVGEIDVLVNNAGITR 103 (256)
T ss_dssp HHHHHHHTCCEEEEEECCCCCC
T ss_pred HHHHHHhcCCCCEEEECCCCCC
Confidence 87 5799999999653
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.84 E-value=2.2e-08 Score=95.56 Aligned_cols=82 Identities=15% Similarity=0.146 Sum_probs=67.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEec-ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagR-s~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..++|+||+|+||+.++++|++++ .+|++.+| +.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 32 k~~lVTGas~GIG~aia~~la~~G-------~~V~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~Dv~d~~~v~~~~~~~ 103 (271)
T 3v2g_A 32 KTAFVTGGSRGIGAAIAKRLALEG-------AAVALTYVNAAERAQAVVSEIEQ-AGGRAVAIRADNRDAEAIEQAIRET 103 (271)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESSCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEeCCCHHHHHHHHHHHHh-cCCcEEEEECCCCCHHHHHHHHHHH
Confidence 469999999999999999999998 78888865 45667666665531 23467789999999999999887
Q ss_pred -----ccCeeEeccCCCC
Q 014694 88 -----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 104 ~~~~g~iD~lvnnAg~~~ 121 (271)
T 3v2g_A 104 VEALGGLDILVNSAGIWH 121 (271)
T ss_dssp HHHHSCCCEEEECCCCCC
T ss_pred HHHcCCCcEEEECCCCCC
Confidence 6899999999653
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=98.84 E-value=1.2e-08 Score=97.69 Aligned_cols=79 Identities=18% Similarity=0.148 Sum_probs=70.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..+|||||++.||+.+++.|+++| .+|++.+|+.+++++..++++ .+...+.+|++|+++++++++
T Consensus 30 KvalVTGas~GIG~aiA~~la~~G-------a~V~i~~r~~~~l~~~~~~~g----~~~~~~~~Dv~~~~~v~~~~~~~~ 98 (273)
T 4fgs_A 30 KIAVITGATSGIGLAAAKRFVAEG-------ARVFITGRRKDVLDAAIAEIG----GGAVGIQADSANLAELDRLYEKVK 98 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHC----TTCEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEeCcCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHcC----CCeEEEEecCCCHHHHHHHHHHHH
Confidence 368999999999999999999998 899999999999999999885 467789999999999999876
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
+.|++||+||...
T Consensus 99 ~~~G~iDiLVNNAG~~~ 115 (273)
T 4fgs_A 99 AEAGRIDVLFVNAGGGS 115 (273)
T ss_dssp HHHSCEEEEEECCCCCC
T ss_pred HHcCCCCEEEECCCCCC
Confidence 4699999999643
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=98.84 E-value=6.9e-09 Score=98.02 Aligned_cols=83 Identities=13% Similarity=0.151 Sum_probs=68.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhH-HHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR-VKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~k-l~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..++|+||+|+||+.++++|++++ .+|++.+|+.++ ++++.+++......++.++.+|++|+++++++++
T Consensus 5 k~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 77 (260)
T 1x1t_A 5 KVAVVTGSTSGIGLGIATALAAQG-------ADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNA 77 (260)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTT-------CEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHcC-------CEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHH
Confidence 479999999999999999999998 799999999887 7777665521002356788899999999999887
Q ss_pred -----ccCeeEeccCCCC
Q 014694 88 -----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 78 ~~~~g~iD~lv~~Ag~~~ 95 (260)
T 1x1t_A 78 VRQMGRIDILVNNAGIQH 95 (260)
T ss_dssp HHHHSCCSEEEECCCCCC
T ss_pred HHhcCCCCEEEECCCCCC
Confidence 6899999999643
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.84 E-value=1.3e-08 Score=99.72 Aligned_cols=81 Identities=17% Similarity=0.211 Sum_probs=65.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC-----hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-----PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs-----~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~ 85 (420)
..++||||+|+||+.+++.|+++| ++|++..|+ .++++++.+.+.. ...++.++.+|++|+++++++
T Consensus 6 k~vlVTGas~GIG~aia~~L~~~G-------~~V~~~~r~~~~r~~~~~~~l~~~~~~-~~~~~~~~~~Dvtd~~~v~~~ 77 (324)
T 3u9l_A 6 KIILITGASSGFGRLTAEALAGAG-------HRVYASMRDIVGRNASNVEAIAGFARD-NDVDLRTLELDVQSQVSVDRA 77 (324)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTT-------CEEEEEESCTTTTTHHHHHHHHHHHHH-HTCCEEEEECCTTCHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-------CEEEEecCcccccCHHHHHHHHHHHHh-cCCcEEEEEeecCCHHHHHHH
Confidence 479999999999999999999998 789887665 5566655544321 124678899999999999999
Q ss_pred Hh-------ccCeeEeccCCC
Q 014694 86 CS-------QTKLLLNCVGPY 99 (420)
Q Consensus 86 ~~-------~~dvVIn~aGp~ 99 (420)
++ ++|+|||+||..
T Consensus 78 ~~~~~~~~g~iD~lVnnAG~~ 98 (324)
T 3u9l_A 78 IDQIIGEDGRIDVLIHNAGHM 98 (324)
T ss_dssp HHHHHHHHSCCSEEEECCCCC
T ss_pred HHHHHHHcCCCCEEEECCCcC
Confidence 87 789999999954
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=98.84 E-value=5.7e-09 Score=99.25 Aligned_cols=84 Identities=15% Similarity=0.113 Sum_probs=69.1
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEE-ecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA-GRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~ia-gRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
+...|+|+||+|+||+.++++|++++ ++|++. .|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 25 ~~k~vlITGas~gIG~a~a~~l~~~G-------~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~ 96 (272)
T 4e3z_A 25 DTPVVLVTGGSRGIGAAVCRLAARQG-------WRVGVNYAANREAADAVVAAITE-SGGEAVAIPGDVGNAADIAAMFS 96 (272)
T ss_dssp CSCEEEETTTTSHHHHHHHHHHHHTT-------CEEEEEESSCHHHHHHHHHHHHH-TTCEEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCC-------CEEEEEcCCChhHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHH
Confidence 34479999999999999999999998 788776 7888888777766531 23467889999999999999887
Q ss_pred -------ccCeeEeccCCCC
Q 014694 88 -------QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -------~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 97 ~~~~~~g~id~li~nAg~~~ 116 (272)
T 4e3z_A 97 AVDRQFGRLDGLVNNAGIVD 116 (272)
T ss_dssp HHHHHHSCCCEEEECCCCCC
T ss_pred HHHHhCCCCCEEEECCCCCC
Confidence 5699999999754
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=98.83 E-value=2.8e-09 Score=104.14 Aligned_cols=107 Identities=14% Similarity=0.172 Sum_probs=76.2
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
..++|+|+|||||+|++++++|++++.......++|.+.+|+.++... . ...++.++.+|++|+++++++++
T Consensus 13 ~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~----~---~~~~~~~~~~Dl~d~~~~~~~~~~ 85 (342)
T 2hrz_A 13 QGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA----G---FSGAVDARAADLSAPGEAEKLVEA 85 (342)
T ss_dssp SCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT----T---CCSEEEEEECCTTSTTHHHHHHHT
T ss_pred cCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc----c---cCCceeEEEcCCCCHHHHHHHHhc
Confidence 346899999999999999999999861000000478889998654311 0 12457789999999999999995
Q ss_pred ccCeeEeccCCCCCC---------------cHHHHHHHHHcC-----C-cEEecCC
Q 014694 88 QTKLLLNCVGPYRLH---------------GDPVAAACVHSG-----C-DYLDISG 122 (420)
Q Consensus 88 ~~dvVIn~aGp~~~~---------------~~~vv~Ac~~~g-----~-~yvdisg 122 (420)
++|+|||+||+.... ..+++++|.+.+ + ++|.+|.
T Consensus 86 ~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS 141 (342)
T 2hrz_A 86 RPDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSS 141 (342)
T ss_dssp CCSEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEE
T ss_pred CCCEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCc
Confidence 899999999975310 156777777765 3 5666654
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=98.83 E-value=1.8e-08 Score=95.48 Aligned_cols=82 Identities=15% Similarity=0.115 Sum_probs=67.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEE-EecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLAL-AGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~i-agRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..|+|+||+|+||+.++++|++++ .+|++ ..|+.+++++..+++.. ...++.++.+|++|+++++++++
T Consensus 27 k~vlVTGas~gIG~~la~~l~~~G-------~~v~i~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~~~~~~~~~ 98 (267)
T 4iiu_A 27 RSVLVTGASKGIGRAIARQLAADG-------FNIGVHYHRDAAGAQETLNAIVA-NGGNGRLLSFDVANREQCREVLEHE 98 (267)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT-------CEEEEEESSCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCchHHHHHHHHHHHh-cCCceEEEEecCCCHHHHHHHHHHH
Confidence 469999999999999999999998 67755 56788887777766532 23567899999999999999887
Q ss_pred -----ccCeeEeccCCCC
Q 014694 88 -----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (420)
..|+|||+||...
T Consensus 99 ~~~~g~id~li~nAg~~~ 116 (267)
T 4iiu_A 99 IAQHGAWYGVVSNAGIAR 116 (267)
T ss_dssp HHHHCCCSEEEECCCCCC
T ss_pred HHHhCCccEEEECCCCCC
Confidence 6899999999654
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=98.83 E-value=4.7e-09 Score=97.64 Aligned_cols=82 Identities=15% Similarity=0.104 Sum_probs=67.4
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEE-EecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLAL-AGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~i-agRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..|+|+||+|++|+.++++|++++ ++|++ .+|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 2 k~vlVTGasggiG~~la~~l~~~G-------~~v~~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 73 (244)
T 1edo_A 2 PVVVVTGASRGIGKAIALSLGKAG-------CKVLVNYARSAKAAEEVSKQIEA-YGGQAITFGGDVSKEADVEAMMKTA 73 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTT-------CEEEEEESSCHHHHHHHHHHHHH-HTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEcCCCHHHHHHHHHHHHh-cCCcEEEEeCCCCCHHHHHHHHHHH
Confidence 369999999999999999999998 78888 58998888776655421 12357788999999999999887
Q ss_pred -----ccCeeEeccCCCC
Q 014694 88 -----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 74 ~~~~g~id~li~~Ag~~~ 91 (244)
T 1edo_A 74 IDAWGTIDVVVNNAGITR 91 (244)
T ss_dssp HHHSSCCSEEEECCCCCC
T ss_pred HHHcCCCCEEEECCCCCC
Confidence 6899999999653
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=98.83 E-value=1.4e-08 Score=97.21 Aligned_cols=82 Identities=12% Similarity=0.092 Sum_probs=69.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC----------------hhHHHHHHHHhCCCCCCCccEEEE
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN----------------PTRVKQALQWASPSHSLSIPILTA 74 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs----------------~~kl~~~~~~l~~~~~~~~~~i~~ 74 (420)
..++|+||+|+||+.+++.|++++ .+|++.+|+ .++++++.+++.. ...++.++.+
T Consensus 12 k~~lVTGas~gIG~aia~~la~~G-------~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 83 (286)
T 3uve_A 12 KVAFVTGAARGQGRSHAVRLAQEG-------ADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKG-HNRRIVTAEV 83 (286)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-------CEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHT-TTCCEEEEEC
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC-------CeEEEEeccccccccccccccccCCHHHHHHHHHHHhh-cCCceEEEEc
Confidence 479999999999999999999998 899999887 6777777766542 2356788999
Q ss_pred eCCCHHHHHHHHh-------ccCeeEeccCCCC
Q 014694 75 DTTDPPSLHRLCS-------QTKLLLNCVGPYR 100 (420)
Q Consensus 75 D~~d~~sl~~~~~-------~~dvVIn~aGp~~ 100 (420)
|++|+++++++++ +.|+|||+||...
T Consensus 84 Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~ 116 (286)
T 3uve_A 84 DVRDYDALKAAVDSGVEQLGRLDIIVANAGIGN 116 (286)
T ss_dssp CTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCEEEECCcccC
Confidence 9999999999887 6899999999643
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=98.83 E-value=6.1e-09 Score=100.73 Aligned_cols=86 Identities=12% Similarity=0.090 Sum_probs=71.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--c
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--Q 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--~ 88 (420)
++|+|+|||||+|++++++|++.+ ++|++..|+. .+|+.|.+++.++++ +
T Consensus 4 ~~ilVtGatG~iG~~l~~~L~~~g-------~~v~~~~r~~---------------------~~D~~d~~~~~~~~~~~~ 55 (321)
T 1e6u_A 4 QRVFIAGHRGMVGSAIRRQLEQRG-------DVELVLRTRD---------------------ELNLLDSRAVHDFFASER 55 (321)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCT-------TEEEECCCTT---------------------TCCTTCHHHHHHHHHHHC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCC-------CeEEEEecCc---------------------cCCccCHHHHHHHHHhcC
Confidence 689999999999999999999887 7888877752 158999999999999 8
Q ss_pred cCeeEeccCCCCC------C-----------cHHHHHHHHHcCC-cEEecCCcH
Q 014694 89 TKLLLNCVGPYRL------H-----------GDPVAAACVHSGC-DYLDISGEP 124 (420)
Q Consensus 89 ~dvVIn~aGp~~~------~-----------~~~vv~Ac~~~g~-~yvdisge~ 124 (420)
+|+|||+||+... . ..+++++|.+.++ ++|.+|...
T Consensus 56 ~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~ 109 (321)
T 1e6u_A 56 IDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSC 109 (321)
T ss_dssp CSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGG
T ss_pred CCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHH
Confidence 9999999997641 0 1578899999887 788887643
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=98.83 E-value=5e-09 Score=103.17 Aligned_cols=100 Identities=11% Similarity=0.125 Sum_probs=75.9
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
.++|+|+|||||+|++++++|++.+. .+|++.+|+..+.+ .+.+ .++. +.+|++|++.++++++
T Consensus 46 ~~~vlVtGatG~iG~~l~~~L~~~g~------~~V~~~~r~~~~~~--~~~~-----~~~~-~~~d~~~~~~~~~~~~~~ 111 (357)
T 2x6t_A 46 GRMIIVTGGAGFIGSNIVKALNDKGI------TDILVVDNLKDGTK--FVNL-----VDLN-IADYMDKEDFLIQIMAGE 111 (357)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTTC------CCEEEEECCSSGGG--GGGT-----TTSC-CSEEEEHHHHHHHHHTTC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC------cEEEEEecCCCcch--hhcc-----cCce-EeeecCcHHHHHHHHhhc
Confidence 36799999999999999999999862 57888899765421 1112 1233 6789999999999997
Q ss_pred ---ccCeeEeccCCCCCC--------------cHHHHHHHHHcCCcEEecCCc
Q 014694 88 ---QTKLLLNCVGPYRLH--------------GDPVAAACVHSGCDYLDISGE 123 (420)
Q Consensus 88 ---~~dvVIn~aGp~~~~--------------~~~vv~Ac~~~g~~yvdisge 123 (420)
++|+|||+||+.... ..+++++|.+.++++|.+|..
T Consensus 112 ~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~r~V~~SS~ 164 (357)
T 2x6t_A 112 EFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSA 164 (357)
T ss_dssp CCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEG
T ss_pred ccCCCCEEEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcch
Confidence 599999999975431 167889999888888887754
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=98.82 E-value=8.7e-09 Score=98.19 Aligned_cols=82 Identities=16% Similarity=0.126 Sum_probs=68.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEec-ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagR-s~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..++|+||+|+||+.+++.|++++ .+|++.+| +.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 29 k~vlVTGas~gIG~aia~~la~~G-------~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~v~~~~~~~ 100 (269)
T 4dmm_A 29 RIALVTGASRGIGRAIALELAAAG-------AKVAVNYASSAGAADEVVAAIAA-AGGEAFAVKADVSQESEVEALFAAV 100 (269)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTT-------CEEEEEESSCHHHHHHHHHHHHH-TTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEeCCChHHHHHHHHHHHh-cCCcEEEEECCCCCHHHHHHHHHHH
Confidence 469999999999999999999998 78998888 67777776665531 23467889999999999999887
Q ss_pred -----ccCeeEeccCCCC
Q 014694 88 -----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 101 ~~~~g~id~lv~nAg~~~ 118 (269)
T 4dmm_A 101 IERWGRLDVLVNNAGITR 118 (269)
T ss_dssp HHHHSCCCEEEECCCCCC
T ss_pred HHHcCCCCEEEECCCCCC
Confidence 6799999999754
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=98.82 E-value=3.4e-09 Score=103.86 Aligned_cols=101 Identities=13% Similarity=0.143 Sum_probs=74.3
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
..++|+|+|||||+|++++++|++.+ ++|.+.+|+..+.....+.+. ...++.++.+|+.|.. +.+
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~-----~~~ 91 (343)
T 2b69_A 26 DRKRILITGGAGFVGSHLTDKLMMDG-------HEVTVVDNFFTGRKRNVEHWI--GHENFELINHDVVEPL-----YIE 91 (343)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEECCSSCCGGGTGGGT--TCTTEEEEECCTTSCC-----CCC
T ss_pred CCCEEEEEcCccHHHHHHHHHHHHCC-------CEEEEEeCCCccchhhhhhhc--cCCceEEEeCccCChh-----hcC
Confidence 34689999999999999999999987 799999997542211111111 1246788899998753 568
Q ss_pred cCeeEeccCCCCCC----------------cHHHHHHHHHcCCcEEecCCc
Q 014694 89 TKLLLNCVGPYRLH----------------GDPVAAACVHSGCDYLDISGE 123 (420)
Q Consensus 89 ~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~~yvdisge 123 (420)
+|+||||||+.... ..+++++|.+.++++|.+|..
T Consensus 92 ~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~ 142 (343)
T 2b69_A 92 VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTS 142 (343)
T ss_dssp CSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEG
T ss_pred CCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEECcH
Confidence 99999999975421 257889999988888887754
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.82 E-value=1e-08 Score=97.31 Aligned_cols=77 Identities=14% Similarity=0.113 Sum_probs=66.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|+||+++++.|++++ .+|++.+|+.+++.+.+++. ++.++.+|++|+++++++++
T Consensus 28 k~vlVTGas~gIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~------~~~~~~~Dv~~~~~v~~~~~~~~ 94 (260)
T 3gem_A 28 APILITGASQRVGLHCALRLLEHG-------HRVIISYRTEHASVTELRQA------GAVALYGDFSCETGIMAFIDLLK 94 (260)
T ss_dssp CCEEESSTTSHHHHHHHHHHHHTT-------CCEEEEESSCCHHHHHHHHH------TCEEEECCTTSHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEeCChHHHHHHHHhc------CCeEEECCCCCHHHHHHHHHHHH
Confidence 469999999999999999999998 78999999988876555544 36789999999999999886
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 95 ~~~g~iD~lv~nAg~~~ 111 (260)
T 3gem_A 95 TQTSSLRAVVHNASEWL 111 (260)
T ss_dssp HHCSCCSEEEECCCCCC
T ss_pred HhcCCCCEEEECCCccC
Confidence 5799999999654
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=98.81 E-value=2.1e-09 Score=111.47 Aligned_cols=106 Identities=12% Similarity=0.098 Sum_probs=77.9
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhH---HHHHHHHhCC--------CCCCCccEEEEeCC
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR---VKQALQWASP--------SHSLSIPILTADTT 77 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~k---l~~~~~~l~~--------~~~~~~~~i~~D~~ 77 (420)
..++|+|+|||||+|++++++|.+.+ .+|.+.+|+.++ ++++.+.+.. ....++.++.+|+.
T Consensus 149 ~~~~VLVTGatG~iG~~l~~~L~~~g-------~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~ 221 (508)
T 4f6l_B 149 PLGNTLLTGATGFLGAYLIEALQGYS-------HRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFE 221 (508)
T ss_dssp CCEEEEESCTTSHHHHHHHHHTBTTE-------EEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTT
T ss_pred CCCeEEEECCccchHHHHHHHHHhcC-------CEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCc
Confidence 34689999999999999999996665 899999998763 2222221100 01357899999999
Q ss_pred CHHHHHHHHhccCeeEeccCCCCCC-------------cHHHHHHHHHcCCcEEecCC
Q 014694 78 DPPSLHRLCSQTKLLLNCVGPYRLH-------------GDPVAAACVHSGCDYLDISG 122 (420)
Q Consensus 78 d~~sl~~~~~~~dvVIn~aGp~~~~-------------~~~vv~Ac~~~g~~yvdisg 122 (420)
|++++. ...++|+|||||++.... ..+++++|.+.+.++|.+|.
T Consensus 222 d~~~l~-~~~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~v~iSS 278 (508)
T 4f6l_B 222 CMDDVV-LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVST 278 (508)
T ss_dssp BCSSCC-CSSCCSEEEECCCC--------CCHHHHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred ccccCC-CccCCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHhCCCcEEEeCC
Confidence 988888 778999999999975421 17788999886667777764
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=98.81 E-value=6.4e-09 Score=93.98 Aligned_cols=64 Identities=23% Similarity=0.354 Sum_probs=56.6
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc-
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~- 88 (420)
+|+|+|+||+|++|+.++++|+ ++ ++|++.+|+.+ .+.+|++|++++++++++
T Consensus 3 kM~vlVtGasg~iG~~~~~~l~-~g-------~~V~~~~r~~~------------------~~~~D~~~~~~~~~~~~~~ 56 (202)
T 3d7l_A 3 AMKILLIGASGTLGSAVKERLE-KK-------AEVITAGRHSG------------------DVTVDITNIDSIKKMYEQV 56 (202)
T ss_dssp SCEEEEETTTSHHHHHHHHHHT-TT-------SEEEEEESSSS------------------SEECCTTCHHHHHHHHHHH
T ss_pred CcEEEEEcCCcHHHHHHHHHHH-CC-------CeEEEEecCcc------------------ceeeecCCHHHHHHHHHHh
Confidence 4689999999999999999999 87 79999999753 367899999999999886
Q ss_pred --cCeeEeccCCC
Q 014694 89 --TKLLLNCVGPY 99 (420)
Q Consensus 89 --~dvVIn~aGp~ 99 (420)
.|+|||++|..
T Consensus 57 ~~~d~vi~~ag~~ 69 (202)
T 3d7l_A 57 GKVDAIVSATGSA 69 (202)
T ss_dssp CCEEEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 79999999954
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.81 E-value=5.6e-09 Score=99.12 Aligned_cols=82 Identities=13% Similarity=0.087 Sum_probs=71.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++||||++.||+.+++.|+++| .+|++.+|+++++++..+++.. ...++..+.+|++|+++++++++
T Consensus 10 KvalVTGas~GIG~aia~~la~~G-------a~Vvi~~~~~~~~~~~~~~l~~-~g~~~~~~~~Dv~~~~~v~~~~~~~~ 81 (255)
T 4g81_D 10 KTALVTGSARGLGFAYAEGLAAAG-------ARVILNDIRATLLAESVDTLTR-KGYDAHGVAFDVTDELAIEAAFSKLD 81 (255)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTT-------CEEEECCSCHHHHHHHHHHHHH-TTCCEEECCCCTTCHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEeeCCCHHHHHHHHHHHH
Confidence 469999999999999999999998 8999999999999988887742 23467788999999999999876
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
+.|++||+||...
T Consensus 82 ~~~G~iDiLVNNAG~~~ 98 (255)
T 4g81_D 82 AEGIHVDILINNAGIQY 98 (255)
T ss_dssp HTTCCCCEEEECCCCCC
T ss_pred HHCCCCcEEEECCCCCC
Confidence 4799999999654
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.81 E-value=8.3e-09 Score=99.02 Aligned_cols=98 Identities=11% Similarity=0.123 Sum_probs=75.0
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc---
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ--- 88 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~--- 88 (420)
+|+|+|||||+|++++++|++++. .+|.+.+|+..+.. . ..+. ++. +.+|++|.+.+++++++
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~------~~V~~~~r~~~~~~-~-~~~~-----~~~-~~~d~~~~~~~~~~~~~~~~ 66 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGI------TDILVVDNLKDGTK-F-VNLV-----DLN-IADYMDKEDFLIQIMAGEEF 66 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTC------CCEEEEECCSSGGG-G-HHHH-----TSC-CSEEEEHHHHHHHHHTTCCC
T ss_pred CEEEEcCccHHHHHHHHHHHHCCC------cEEEEEccCCCCch-h-hhcC-----cce-eccccccHHHHHHHHhcccc
Confidence 489999999999999999999862 57888898765421 0 1111 123 67899999999999985
Q ss_pred --cCeeEeccCCCCCC--------------cHHHHHHHHHcCCcEEecCCc
Q 014694 89 --TKLLLNCVGPYRLH--------------GDPVAAACVHSGCDYLDISGE 123 (420)
Q Consensus 89 --~dvVIn~aGp~~~~--------------~~~vv~Ac~~~g~~yvdisge 123 (420)
+|+||||+|+.... ..+++++|.+.++++|.+|..
T Consensus 67 ~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~ 117 (310)
T 1eq2_A 67 GDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSA 117 (310)
T ss_dssp SSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEG
T ss_pred CCCcEEEECcccccCcccCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEeeH
Confidence 99999999976431 167889999988888887754
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=98.81 E-value=6.9e-09 Score=99.43 Aligned_cols=81 Identities=14% Similarity=0.148 Sum_probs=67.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..|+|+||+|+||+.++++|++++ ++|++.+|+.++++++.+++......++.++.+|++|+++++++++
T Consensus 29 k~vlITGasggIG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~ 101 (286)
T 1xu9_A 29 KKVIVTGASKGIGREMAYHLAKMG-------AHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAG 101 (286)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 7999999999998877665421011257789999999999988876
Q ss_pred ----ccCeeEec-cCC
Q 014694 88 ----QTKLLLNC-VGP 98 (420)
Q Consensus 88 ----~~dvVIn~-aGp 98 (420)
+.|+|||+ +|.
T Consensus 102 ~~~g~iD~li~naag~ 117 (286)
T 1xu9_A 102 KLMGGLDMLILNHITN 117 (286)
T ss_dssp HHHTSCSEEEECCCCC
T ss_pred HHcCCCCEEEECCccC
Confidence 68999999 564
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=98.81 E-value=1.5e-08 Score=95.93 Aligned_cols=81 Identities=15% Similarity=0.112 Sum_probs=67.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEE-ecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA-GRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~ia-gRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..++|+||+|+||+.++++|++++ .+|++. .|+.+++++..+++.. ...++.++.+|++|+++++++++
T Consensus 9 k~vlVTGas~GIG~aia~~la~~G-------~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~ 80 (259)
T 3edm_A 9 RTIVVAGAGRDIGRACAIRFAQEG-------ANVVLTYNGAAEGAATAVAEIEK-LGRSALAIKADLTNAAEVEAAISAA 80 (259)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEECSSCHHHHHHHHHHHT-TTSCCEEEECCTTCHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCC-------CEEEEEcCCCHHHHHHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHHH
Confidence 479999999999999999999998 788887 6677777777666632 23567889999999999999887
Q ss_pred -----ccCeeEeccCCC
Q 014694 88 -----QTKLLLNCVGPY 99 (420)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (420)
+.|+|||+||..
T Consensus 81 ~~~~g~id~lv~nAg~~ 97 (259)
T 3edm_A 81 ADKFGEIHGLVHVAGGL 97 (259)
T ss_dssp HHHHCSEEEEEECCCCC
T ss_pred HHHhCCCCEEEECCCcc
Confidence 679999999854
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=98.81 E-value=2.4e-08 Score=95.54 Aligned_cols=82 Identities=11% Similarity=0.065 Sum_probs=65.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhH-HHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR-VKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~k-l~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..++|+||+|+||+.++++|++++ ++|++.+|+.++ ++.+.+++.. ...++.++.+|++|.++++++++
T Consensus 30 k~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 101 (283)
T 1g0o_A 30 KVALVTGAGRGIGREMAMELGRRG-------CKVIVNYANSTESAEEVVAAIKK-NGSDAACVKANVGVVEDIVRMFEEA 101 (283)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT-------CEEEEEESSCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEeCCchHHHHHHHHHHHH-hCCCeEEEEcCCCCHHHHHHHHHHH
Confidence 479999999999999999999998 799999998654 4444444421 13467789999999999988876
Q ss_pred -----ccCeeEeccCCCC
Q 014694 88 -----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 102 ~~~~g~iD~lv~~Ag~~~ 119 (283)
T 1g0o_A 102 VKIFGKLDIVCSNSGVVS 119 (283)
T ss_dssp HHHHSCCCEEEECCCCCC
T ss_pred HHHcCCCCEEEECCCcCC
Confidence 5799999999653
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.80 E-value=8.4e-09 Score=99.36 Aligned_cols=86 Identities=22% Similarity=0.196 Sum_probs=70.4
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~-~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..++|+||+|+||+.+++.|++++.. ..+|++.+|+.++++++.+++.. ....++.++.+|++|+++++++++
T Consensus 34 k~~lVTGas~GIG~aia~~l~~~G~~----~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 109 (287)
T 3rku_A 34 KTVLITGASAGIGKATALEYLEASNG----DMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENL 109 (287)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHHTT----CSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTS
T ss_pred CEEEEecCCChHHHHHHHHHHHcCCC----CceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 46999999999999999999998710 14899999999999888776632 013457789999999999999987
Q ss_pred -----ccCeeEeccCCCC
Q 014694 88 -----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 110 ~~~~g~iD~lVnnAG~~~ 127 (287)
T 3rku_A 110 PQEFKDIDILVNNAGKAL 127 (287)
T ss_dssp CGGGCSCCEEEECCCCCC
T ss_pred HHhcCCCCEEEECCCcCC
Confidence 4799999999643
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.80 E-value=1.4e-08 Score=97.00 Aligned_cols=76 Identities=14% Similarity=0.100 Sum_probs=68.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|+||+.++++|++++ .+|++++|+.++++++.++++ .++.++.+|++|.++++++++
T Consensus 31 k~vlVTGas~GIG~aia~~l~~~G-------~~Vi~~~r~~~~~~~~~~~~~----~~~~~~~~Dl~~~~~v~~~~~~~~ 99 (281)
T 3ppi_A 31 ASAIVSGGAGGLGEATVRRLHADG-------LGVVIADLAAEKGKALADELG----NRAEFVSTNVTSEDSVLAAIEAAN 99 (281)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHC----TTEEEEECCTTCHHHHHHHHHHHT
T ss_pred CEEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCChHHHHHHHHHhC----CceEEEEcCCCCHHHHHHHHHHHH
Confidence 369999999999999999999998 799999999999999888874 468899999999999999887
Q ss_pred ---ccCeeEeccC
Q 014694 88 ---QTKLLLNCVG 97 (420)
Q Consensus 88 ---~~dvVIn~aG 97 (420)
+.|+|||+++
T Consensus 100 ~~~~id~lv~~aa 112 (281)
T 3ppi_A 100 QLGRLRYAVVAHG 112 (281)
T ss_dssp TSSEEEEEEECCC
T ss_pred HhCCCCeEEEccC
Confidence 5799999944
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.80 E-value=1.1e-08 Score=97.52 Aligned_cols=83 Identities=17% Similarity=0.135 Sum_probs=67.5
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEE-ecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA-GRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~ia-gRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
...++|+||+|+||+.+++.|++++ .+|++. .|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 27 ~k~~lVTGas~GIG~aia~~la~~G-------~~Vv~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~ 98 (267)
T 3u5t_A 27 NKVAIVTGASRGIGAAIAARLASDG-------FTVVINYAGKAAAAEEVAGKIEA-AGGKALTAQADVSDPAAVRRLFAT 98 (267)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHT-------CEEEEEESSCSHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEcCCCHHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHH
Confidence 3479999999999999999999998 788877 5667777776665531 23467889999999999999887
Q ss_pred ------ccCeeEeccCCCC
Q 014694 88 ------QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 99 ~~~~~g~iD~lvnnAG~~~ 117 (267)
T 3u5t_A 99 AEEAFGGVDVLVNNAGIMP 117 (267)
T ss_dssp HHHHHSCEEEEEECCCCCC
T ss_pred HHHHcCCCCEEEECCCCCC
Confidence 6799999999653
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=98.80 E-value=7.7e-09 Score=99.28 Aligned_cols=82 Identities=15% Similarity=0.169 Sum_probs=68.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh-hHHHHHHHHhCCCCCCCccEEEEeCCC----HHHHHHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-TRVKQALQWASPSHSLSIPILTADTTD----PPSLHRL 85 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~-~kl~~~~~~l~~~~~~~~~~i~~D~~d----~~sl~~~ 85 (420)
..++|+||+|+||+.++++|++++ .+|++.+|+. ++++++.+++......++.++.+|++| +++++++
T Consensus 24 k~~lVTGas~gIG~aia~~L~~~G-------~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~ 96 (288)
T 2x9g_A 24 PAAVVTGAAKRIGRAIAVKLHQTG-------YRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEI 96 (288)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHHT-------CEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC-------CeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHH
Confidence 479999999999999999999998 7999999998 888777766520013467889999999 9999888
Q ss_pred Hh-------ccCeeEeccCCC
Q 014694 86 CS-------QTKLLLNCVGPY 99 (420)
Q Consensus 86 ~~-------~~dvVIn~aGp~ 99 (420)
++ +.|+|||+||..
T Consensus 97 ~~~~~~~~g~iD~lvnnAG~~ 117 (288)
T 2x9g_A 97 INSCFRAFGRCDVLVNNASAF 117 (288)
T ss_dssp HHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHhcCCCCEEEECCCCC
Confidence 76 689999999964
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.80 E-value=1.9e-08 Score=95.35 Aligned_cols=73 Identities=22% Similarity=0.232 Sum_probs=63.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|+||+.++++|++++ .+|++.+|+.++.+ ..++.++.+|++|+++++++++
T Consensus 29 k~vlVTGas~gIG~aia~~l~~~G-------~~V~~~~r~~~~~~----------~~~~~~~~~Dv~d~~~v~~~~~~~~ 91 (260)
T 3un1_A 29 KVVVITGASQGIGAGLVRAYRDRN-------YRVVATSRSIKPSA----------DPDIHTVAGDISKPETADRIVREGI 91 (260)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTT-------CEEEEEESSCCCCS----------STTEEEEESCTTSHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEeCChhhcc----------cCceEEEEccCCCHHHHHHHHHHHH
Confidence 469999999999999999999998 89999999876531 2357889999999999999887
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 92 ~~~g~iD~lv~nAg~~~ 108 (260)
T 3un1_A 92 ERFGRIDSLVNNAGVFL 108 (260)
T ss_dssp HHHSCCCEEEECCCCCC
T ss_pred HHCCCCCEEEECCCCCC
Confidence 6899999999653
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=98.79 E-value=1.2e-08 Score=98.45 Aligned_cols=79 Identities=15% Similarity=0.082 Sum_probs=64.2
Q ss_pred cceEEEEcCCcH--HHHHHHHHHHHhCCCCCCCcceEEEEecChhHHH---HHHHHhCCCCCCCccEEEEeCCCHHHHHH
Q 014694 10 LFDVIILGASGF--TGKYVVREALKLFNFPSSPIKSLALAGRNPTRVK---QALQWASPSHSLSIPILTADTTDPPSLHR 84 (420)
Q Consensus 10 ~~~IvV~GATG~--~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~---~~~~~l~~~~~~~~~~i~~D~~d~~sl~~ 84 (420)
...++|+||+|+ ||+.+++.|++++ .+|++.+|+.+..+ ++.++. .++.++.+|++|++++++
T Consensus 31 gk~~lVTGasg~~GIG~aia~~la~~G-------~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~ 98 (293)
T 3grk_A 31 GKRGLILGVANNRSIAWGIAKAAREAG-------AELAFTYQGDALKKRVEPLAEEL-----GAFVAGHCDVADAASIDA 98 (293)
T ss_dssp TCEEEEECCCSSSSHHHHHHHHHHHTT-------CEEEEEECSHHHHHHHHHHHHHH-----TCEEEEECCTTCHHHHHH
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHCC-------CEEEEEcCCHHHHHHHHHHHHhc-----CCceEEECCCCCHHHHHH
Confidence 347999999988 9999999999998 78999999965433 333333 357789999999999999
Q ss_pred HHh-------ccCeeEeccCCCC
Q 014694 85 LCS-------QTKLLLNCVGPYR 100 (420)
Q Consensus 85 ~~~-------~~dvVIn~aGp~~ 100 (420)
+++ +.|+|||+||...
T Consensus 99 ~~~~~~~~~g~iD~lVnnAG~~~ 121 (293)
T 3grk_A 99 VFETLEKKWGKLDFLVHAIGFSD 121 (293)
T ss_dssp HHHHHHHHTSCCSEEEECCCCCC
T ss_pred HHHHHHHhcCCCCEEEECCccCC
Confidence 887 5799999999653
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.79 E-value=6.1e-09 Score=98.40 Aligned_cols=79 Identities=18% Similarity=0.155 Sum_probs=66.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~-- 88 (420)
..++|+||+|+||+.++++|++++ .+|++.+|+.++++++.+++.. ...++.++.+|++|+++++++++.
T Consensus 6 k~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~ 77 (260)
T 2qq5_A 6 QVCVVTGASRGIGRGIALQLCKAG-------ATVYITGRHLDTLRVVAQEAQS-LGGQCVPVVCDSSQESEVRSLFEQVD 77 (260)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHH-HSSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHH-cCCceEEEECCCCCHHHHHHHHHHHH
Confidence 469999999999999999999998 7999999999988877766521 123567899999999999887653
Q ss_pred ------cCeeEeccC
Q 014694 89 ------TKLLLNCVG 97 (420)
Q Consensus 89 ------~dvVIn~aG 97 (420)
.|+|||+||
T Consensus 78 ~~~~g~id~lvnnAg 92 (260)
T 2qq5_A 78 REQQGRLDVLVNNAY 92 (260)
T ss_dssp HHHTTCCCEEEECCC
T ss_pred HhcCCCceEEEECCc
Confidence 599999995
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=98.79 E-value=1.2e-08 Score=96.63 Aligned_cols=83 Identities=12% Similarity=0.133 Sum_probs=68.1
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC---hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN---PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs---~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
...++|+||+++||+.++++|++++ .+|++.+|+ .++++++.+++.. ...++.++.+|++|++++++++
T Consensus 11 ~k~vlVTGas~GIG~aia~~la~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~d~~~v~~~~ 82 (262)
T 3ksu_A 11 NKVIVIAGGIKNLGALTAKTFALES-------VNLVLHYHQAKDSDTANKLKDELED-QGAKVALYQSDLSNEEEVAKLF 82 (262)
T ss_dssp TCEEEEETCSSHHHHHHHHHHTTSS-------CEEEEEESCGGGHHHHHHHHHHHHT-TTCEEEEEECCCCSHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CEEEEEecCccCHHHHHHHHHHHHh-cCCcEEEEECCCCCHHHHHHHH
Confidence 3479999999999999999999998 789998764 5567777776642 2346788999999999999988
Q ss_pred h-------ccCeeEeccCCCC
Q 014694 87 S-------QTKLLLNCVGPYR 100 (420)
Q Consensus 87 ~-------~~dvVIn~aGp~~ 100 (420)
+ +.|+|||+||...
T Consensus 83 ~~~~~~~g~iD~lvnnAg~~~ 103 (262)
T 3ksu_A 83 DFAEKEFGKVDIAINTVGKVL 103 (262)
T ss_dssp HHHHHHHCSEEEEEECCCCCC
T ss_pred HHHHHHcCCCCEEEECCCCCC
Confidence 7 6799999999653
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=98.79 E-value=1.4e-08 Score=97.86 Aligned_cols=82 Identities=18% Similarity=0.193 Sum_probs=65.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHH-HHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRV-KQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl-~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..++|+||+|+||+.++++|++++ .+|++.+|+.++. +.+.+.+.. ...++.++.+|++|+++++++++
T Consensus 48 k~vlVTGas~GIG~aia~~la~~G-------~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~ 119 (291)
T 3ijr_A 48 KNVLITGGDSGIGRAVSIAFAKEG-------ANIAIAYLDEEGDANETKQYVEK-EGVKCVLLPGDLSDEQHCKDIVQET 119 (291)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESSCHHHHHHHHHHHHT-TTCCEEEEESCTTSHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEeCCchHHHHHHHHHHHh-cCCcEEEEECCCCCHHHHHHHHHHH
Confidence 479999999999999999999998 7999999987643 333333321 23467889999999999999887
Q ss_pred -----ccCeeEeccCCCC
Q 014694 88 -----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 120 ~~~~g~iD~lvnnAg~~~ 137 (291)
T 3ijr_A 120 VRQLGSLNILVNNVAQQY 137 (291)
T ss_dssp HHHHSSCCEEEECCCCCC
T ss_pred HHHcCCCCEEEECCCCcC
Confidence 6799999999643
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.78 E-value=1.3e-08 Score=95.22 Aligned_cols=78 Identities=13% Similarity=0.080 Sum_probs=66.0
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
...++|+||+|+||+.++++|++++ .+|++.+|+.++++++. ++ .++.++.+|++|+++++++++
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~-~~-----~~~~~~~~D~~~~~~~~~~~~~~ 72 (246)
T 2ag5_A 6 GKVIILTAAAQGIGQAAALAFAREG-------AKVIATDINESKLQELE-KY-----PGIQTRVLDVTKKKQIDQFANEV 72 (246)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHGGGG-GS-----TTEEEEECCTTCHHHHHHHHHHC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHH-hc-----cCceEEEeeCCCHHHHHHHHHHh
Confidence 3479999999999999999999998 79999999998876554 33 257789999999999987754
Q ss_pred -ccCeeEeccCCCC
Q 014694 88 -QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 73 ~~id~lv~~Ag~~~ 86 (246)
T 2ag5_A 73 ERLDVLFNVAGFVH 86 (246)
T ss_dssp SCCSEEEECCCCCC
T ss_pred CCCCEEEECCccCC
Confidence 6799999999653
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.78 E-value=2.3e-08 Score=94.39 Aligned_cols=84 Identities=21% Similarity=0.187 Sum_probs=65.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..|+|+||+|+||+.++++|++++.. ..+|++.+|+.++++.+. ++.. ...++.++.+|++|+++++++++
T Consensus 22 k~vlITGasggIG~~la~~L~~~G~~----~~~V~~~~r~~~~~~~~~-~l~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~ 95 (267)
T 1sny_A 22 NSILITGCNRGLGLGLVKALLNLPQP----PQHLFTTCRNREQAKELE-DLAK-NHSNIHILEIDLRNFDAYDKLVADIE 95 (267)
T ss_dssp SEEEESCCSSHHHHHHHHHHHTSSSC----CSEEEEEESCTTSCHHHH-HHHH-HCTTEEEEECCTTCGGGHHHHHHHHH
T ss_pred CEEEEECCCCcHHHHHHHHHHhcCCC----CcEEEEEecChhhhHHHH-Hhhc-cCCceEEEEecCCChHHHHHHHHHHH
Confidence 47999999999999999999998621 168999999987654332 2210 12467889999999999999887
Q ss_pred ------ccCeeEeccCCCC
Q 014694 88 ------QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 96 ~~~g~~~id~li~~Ag~~~ 114 (267)
T 1sny_A 96 GVTKDQGLNVLFNNAGIAP 114 (267)
T ss_dssp HHHGGGCCSEEEECCCCCC
T ss_pred HhcCCCCccEEEECCCcCC
Confidence 7999999999654
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=98.78 E-value=1.6e-08 Score=94.97 Aligned_cols=79 Identities=24% Similarity=0.256 Sum_probs=63.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcce-EEEEecCh--hHHHHHHHHhCCCCCCCccEEEEeCCCH-HHHHHHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKS-LALAGRNP--TRVKQALQWASPSHSLSIPILTADTTDP-PSLHRLC 86 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~-v~iagRs~--~kl~~~~~~l~~~~~~~~~~i~~D~~d~-~sl~~~~ 86 (420)
..++|+||+|+||+.++++|++++ .+ |++.+|+. +.++++.+... ..++.++.+|++|+ +++++++
T Consensus 6 k~vlVtGas~gIG~~~a~~l~~~G-------~~~v~~~~r~~~~~~~~~l~~~~~---~~~~~~~~~D~~~~~~~~~~~~ 75 (254)
T 1sby_A 6 KNVIFVAALGGIGLDTSRELVKRN-------LKNFVILDRVENPTALAELKAINP---KVNITFHTYDVTVPVAESKKLL 75 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTC-------CSEEEEEESSCCHHHHHHHHHHCT---TSEEEEEECCTTSCHHHHHHHH
T ss_pred cEEEEECCCChHHHHHHHHHHHCC-------CcEEEEEecCchHHHHHHHHHhCC---CceEEEEEEecCCChHHHHHHH
Confidence 479999999999999999999998 65 89999986 44555544321 23577899999998 8888877
Q ss_pred h-------ccCeeEeccCCC
Q 014694 87 S-------QTKLLLNCVGPY 99 (420)
Q Consensus 87 ~-------~~dvVIn~aGp~ 99 (420)
+ +.|+|||+||..
T Consensus 76 ~~~~~~~g~id~lv~~Ag~~ 95 (254)
T 1sby_A 76 KKIFDQLKTVDILINGAGIL 95 (254)
T ss_dssp HHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHhcCCCCEEEECCccC
Confidence 6 689999999964
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=98.78 E-value=1.2e-08 Score=100.11 Aligned_cols=113 Identities=13% Similarity=0.046 Sum_probs=76.6
Q ss_pred CCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh--hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 014694 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 8 ~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~--~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~ 85 (420)
.++|+|+|+||+||+|++++..|++.+..+.....+|.+.+++. ++++....++. ...+.++ .|+.+.+++.+.
T Consensus 2 ~~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~---~~~~~~~-~di~~~~~~~~a 77 (327)
T 1y7t_A 2 KAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELE---DCAFPLL-AGLEATDDPKVA 77 (327)
T ss_dssp CCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHH---TTTCTTE-EEEEEESCHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhh---ccccccc-CCeEeccChHHH
Confidence 34579999999999999999999986510000002789999874 34443333342 1123344 677776778888
Q ss_pred HhccCeeEeccCCCCCCc--------------HHHHHHHHHcC-C--cEEecCCcH
Q 014694 86 CSQTKLLLNCVGPYRLHG--------------DPVAAACVHSG-C--DYLDISGEP 124 (420)
Q Consensus 86 ~~~~dvVIn~aGp~~~~~--------------~~vv~Ac~~~g-~--~yvdisge~ 124 (420)
++++|+|||+||.....+ .+++++|.+++ . .++.+|...
T Consensus 78 ~~~~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~ 133 (327)
T 1y7t_A 78 FKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPA 133 (327)
T ss_dssp TTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred hCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCch
Confidence 999999999999764322 67889999886 4 466666443
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=98.78 E-value=8.2e-09 Score=98.72 Aligned_cols=82 Identities=13% Similarity=0.078 Sum_probs=70.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|+||+.++++|++++ .+|++.+|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 34 k~~lVTGas~GIG~aia~~la~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~~~~~~~~~~ 105 (275)
T 4imr_A 34 RTALVTGSSRGIGAAIAEGLAGAG-------AHVILHGVKPGSTAAVQQRIIA-SGGTAQELAGDLSEAGAGTDLIERAE 105 (275)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTT-------CEEEEEESSTTTTHHHHHHHHH-TTCCEEEEECCTTSTTHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEcCCHHHHHHHHHHHHh-cCCeEEEEEecCCCHHHHHHHHHHHH
Confidence 469999999999999999999998 7999999999888877776631 23567889999999999998887
Q ss_pred ---ccCeeEeccCCCC
Q 014694 88 ---QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ---~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 106 ~~g~iD~lvnnAg~~~ 121 (275)
T 4imr_A 106 AIAPVDILVINASAQI 121 (275)
T ss_dssp HHSCCCEEEECCCCCC
T ss_pred HhCCCCEEEECCCCCC
Confidence 6799999999643
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.78 E-value=2.6e-08 Score=95.10 Aligned_cols=81 Identities=17% Similarity=0.161 Sum_probs=65.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|+||+.+++.|++++ .+|++.+|+ ++++++.+++.. ...++.++.+|++|.++++++.+
T Consensus 32 k~~lVTGas~GIG~aia~~la~~G-------~~V~~~~r~-~~~~~~~~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~ 102 (273)
T 3uf0_A 32 RTAVVTGAGSGIGRAIAHGYARAG-------AHVLAWGRT-DGVKEVADEIAD-GGGSAEAVVADLADLEGAANVAEELA 102 (273)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESS-THHHHHHHHHHT-TTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEcCH-HHHHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHHH
Confidence 469999999999999999999998 789999976 445555555531 23467889999999999988765
Q ss_pred ---ccCeeEeccCCCC
Q 014694 88 ---QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ---~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 103 ~~g~iD~lv~nAg~~~ 118 (273)
T 3uf0_A 103 ATRRVDVLVNNAGIIA 118 (273)
T ss_dssp HHSCCCEEEECCCCCC
T ss_pred hcCCCcEEEECCCCCC
Confidence 6899999999754
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.78 E-value=1.9e-08 Score=95.92 Aligned_cols=82 Identities=13% Similarity=0.132 Sum_probs=68.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEec-------------ChhHHHHHHHHhCCCCCCCccEEEEeCC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-------------NPTRVKQALQWASPSHSLSIPILTADTT 77 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagR-------------s~~kl~~~~~~l~~~~~~~~~~i~~D~~ 77 (420)
..++|+||+|+||+.+++.|++++ .+|++.+| +.+++++..+.+.. ...++.++.+|++
T Consensus 12 k~~lVTGas~GIG~a~a~~la~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~ 83 (277)
T 3tsc_A 12 RVAFITGAARGQGRAHAVRMAAEG-------ADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEA-ANRRIVAAVVDTR 83 (277)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-------CEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHH-TTCCEEEEECCTT
T ss_pred CEEEEECCccHHHHHHHHHHHHcC-------CEEEEEeccccccccccccccCHHHHHHHHHHHHh-cCCeEEEEECCCC
Confidence 469999999999999999999998 79999998 67777776665531 2346788999999
Q ss_pred CHHHHHHHHh-------ccCeeEeccCCCC
Q 014694 78 DPPSLHRLCS-------QTKLLLNCVGPYR 100 (420)
Q Consensus 78 d~~sl~~~~~-------~~dvVIn~aGp~~ 100 (420)
|+++++++++ +.|+|||+||...
T Consensus 84 ~~~~v~~~~~~~~~~~g~id~lvnnAg~~~ 113 (277)
T 3tsc_A 84 DFDRLRKVVDDGVAALGRLDIIVANAGVAA 113 (277)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 9999999886 4899999999754
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.77 E-value=2.2e-08 Score=96.73 Aligned_cols=81 Identities=11% Similarity=0.051 Sum_probs=68.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC------------hhHHHHHHHHhCCCCCCCccEEEEeCCC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN------------PTRVKQALQWASPSHSLSIPILTADTTD 78 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs------------~~kl~~~~~~l~~~~~~~~~~i~~D~~d 78 (420)
..++|+||+++||+.+++.|++++ .+|++.+|+ .+++++..+++.. ...++.++.+|++|
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G-------~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~ 100 (299)
T 3t7c_A 29 KVAFITGAARGQGRSHAITLAREG-------ADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEA-LGRRIIASQVDVRD 100 (299)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-------CEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHH-TTCCEEEEECCTTC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEecccccccccccccCHHHHHHHHHHHHh-cCCceEEEECCCCC
Confidence 469999999999999999999998 799999987 6777776665531 23567889999999
Q ss_pred HHHHHHHHh-------ccCeeEeccCCC
Q 014694 79 PPSLHRLCS-------QTKLLLNCVGPY 99 (420)
Q Consensus 79 ~~sl~~~~~-------~~dvVIn~aGp~ 99 (420)
+++++++++ +.|+|||+||..
T Consensus 101 ~~~v~~~~~~~~~~~g~iD~lv~nAg~~ 128 (299)
T 3t7c_A 101 FDAMQAAVDDGVTQLGRLDIVLANAALA 128 (299)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence 999999887 689999999964
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=98.77 E-value=2e-08 Score=97.93 Aligned_cols=82 Identities=18% Similarity=0.168 Sum_probs=67.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC------------hhHHHHHHHHhCCCCCCCccEEEEeCCC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN------------PTRVKQALQWASPSHSLSIPILTADTTD 78 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs------------~~kl~~~~~~l~~~~~~~~~~i~~D~~d 78 (420)
..++|+||+|+||+.+++.|++++ .+|++++|+ .++++++.+.+.. ...++.++.+|++|
T Consensus 47 k~~lVTGas~GIG~aia~~la~~G-------~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~d 118 (317)
T 3oec_A 47 KVAFITGAARGQGRTHAVRLAQDG-------ADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEE-QGRRIIARQADVRD 118 (317)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTT-------CEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHH-TTCCEEEEECCTTC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-------CeEEEEecccccccccccccCHHHHHHHHHHHHh-cCCeEEEEECCCCC
Confidence 469999999999999999999998 799999886 6667666655431 23467889999999
Q ss_pred HHHHHHHHh-------ccCeeEeccCCCC
Q 014694 79 PPSLHRLCS-------QTKLLLNCVGPYR 100 (420)
Q Consensus 79 ~~sl~~~~~-------~~dvVIn~aGp~~ 100 (420)
+++++++++ +.|+|||+||...
T Consensus 119 ~~~v~~~~~~~~~~~g~iD~lVnnAg~~~ 147 (317)
T 3oec_A 119 LASLQAVVDEALAEFGHIDILVSNVGISN 147 (317)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 999999887 6899999999653
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.77 E-value=1.6e-08 Score=100.20 Aligned_cols=82 Identities=18% Similarity=0.133 Sum_probs=66.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhH-------HHHHHHHhCCCCCCCccEEEEeCCCHHHHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR-------VKQALQWASPSHSLSIPILTADTTDPPSLH 83 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~k-------l~~~~~~l~~~~~~~~~~i~~D~~d~~sl~ 83 (420)
..++|+||+|+||+.++++|++++ .+|++++|+.++ +++..+++.. ...++.++.+|++|+++++
T Consensus 46 k~vlVTGas~GIG~aia~~La~~G-------a~Vvl~~r~~~~~~~l~~~l~~~~~~~~~-~g~~~~~~~~Dv~d~~~v~ 117 (346)
T 3kvo_A 46 CTVFITGASRGIGKAIALKAAKDG-------ANIVIAAKTAQPHPKLLGTIYTAAEEIEA-VGGKALPCIVDVRDEQQIS 117 (346)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT-------CEEEEEESCCSCCSSSCCCHHHHHHHHHH-TTCEEEEEECCTTCHHHHH
T ss_pred CEEEEeCCChHHHHHHHHHHHHCC-------CEEEEEECChhhhhhhHHHHHHHHHHHHh-cCCeEEEEEccCCCHHHHH
Confidence 469999999999999999999998 799999998764 4444444421 1346778999999999999
Q ss_pred HHHh-------ccCeeEeccCCCC
Q 014694 84 RLCS-------QTKLLLNCVGPYR 100 (420)
Q Consensus 84 ~~~~-------~~dvVIn~aGp~~ 100 (420)
++++ +.|+|||+||...
T Consensus 118 ~~~~~~~~~~g~iDilVnnAG~~~ 141 (346)
T 3kvo_A 118 AAVEKAIKKFGGIDILVNNASAIS 141 (346)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHHHHcCCCCEEEECCCCCC
Confidence 9887 6899999999643
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=98.77 E-value=1.1e-08 Score=98.60 Aligned_cols=82 Identities=13% Similarity=0.117 Sum_probs=69.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEe-cChhHHHHHHHHhCCCCCCCccEEEEeCCCHH---------
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAG-RNPTRVKQALQWASPSHSLSIPILTADTTDPP--------- 80 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iag-Rs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~--------- 80 (420)
..++|+||+|+||+.+++.|++++ ++|++.+ |+.++++++.+++......++.++.+|++|++
T Consensus 10 k~~lVTGas~GIG~aia~~la~~G-------~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 82 (291)
T 1e7w_A 10 PVALVTGAAKRLGRSIAEGLHAEG-------YAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADG 82 (291)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTT-------CEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----
T ss_pred CEEEEECCCchHHHHHHHHHHHCC-------CeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCccccccccccc
Confidence 479999999999999999999998 7999999 99998887777652001346788999999999
Q ss_pred --------HHHHHHh-------ccCeeEeccCCC
Q 014694 81 --------SLHRLCS-------QTKLLLNCVGPY 99 (420)
Q Consensus 81 --------sl~~~~~-------~~dvVIn~aGp~ 99 (420)
++.++++ +.|+|||+||..
T Consensus 83 ~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~ 116 (291)
T 1e7w_A 83 SAPVTLFTRCAELVAACYTHWGRCDVLVNNASSF 116 (291)
T ss_dssp CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred ccccchHHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 8888877 689999999964
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=98.76 E-value=3e-08 Score=93.80 Aligned_cols=83 Identities=10% Similarity=-0.006 Sum_probs=69.0
Q ss_pred cceEEEEcCCc--HHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh
Q 014694 10 LFDVIILGASG--FTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 10 ~~~IvV~GATG--~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
...+|||||+| .||+.+++.|+++| .+|++.+|++++++++.+.+......++.++.+|++|+++++++++
T Consensus 6 gK~alVTGaa~~~GIG~aiA~~la~~G-------a~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 78 (256)
T 4fs3_A 6 NKTYVIMGIANKRSIAFGVAKVLDQLG-------AKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFE 78 (256)
T ss_dssp TCEEEEECCCSTTCHHHHHHHHHHHTT-------CEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHH
T ss_pred CCEEEEECCCCCchHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHH
Confidence 34799999987 89999999999998 8999999999888777766542123467889999999999988876
Q ss_pred -------ccCeeEeccCCC
Q 014694 88 -------QTKLLLNCVGPY 99 (420)
Q Consensus 88 -------~~dvVIn~aGp~ 99 (420)
+.|++||++|..
T Consensus 79 ~~~~~~G~iD~lvnnAg~~ 97 (256)
T 4fs3_A 79 QIGKDVGNIDGVYHSIAFA 97 (256)
T ss_dssp HHHHHHCCCSEEEECCCCC
T ss_pred HHHHHhCCCCEEEeccccc
Confidence 579999999954
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=98.76 E-value=1.2e-08 Score=97.85 Aligned_cols=83 Identities=12% Similarity=0.057 Sum_probs=67.5
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh-------HHHHHHHHhCCCCCCCccEEEEeCCCHHHH
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT-------RVKQALQWASPSHSLSIPILTADTTDPPSL 82 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~-------kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl 82 (420)
...++|+||+|+||+.++++|++++ .+|++.+|+.+ ++++..+++.. ...++.++.+|++|++++
T Consensus 9 ~k~vlVTGas~GIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v 80 (285)
T 3sc4_A 9 GKTMFISGGSRGIGLAIAKRVAADG-------ANVALVAKSAEPHPKLPGTIYTAAKEIEE-AGGQALPIVGDIRDGDAV 80 (285)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHTTT-------CEEEEEESCCSCCSSSCCCHHHHHHHHHH-HTSEEEEEECCTTSHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEECChhhhhhhhHHHHHHHHHHHh-cCCcEEEEECCCCCHHHH
Confidence 3479999999999999999999998 79999999876 35454444421 124678899999999999
Q ss_pred HHHHh-------ccCeeEeccCCCC
Q 014694 83 HRLCS-------QTKLLLNCVGPYR 100 (420)
Q Consensus 83 ~~~~~-------~~dvVIn~aGp~~ 100 (420)
+++++ +.|+|||+||...
T Consensus 81 ~~~~~~~~~~~g~id~lvnnAg~~~ 105 (285)
T 3sc4_A 81 AAAVAKTVEQFGGIDICVNNASAIN 105 (285)
T ss_dssp HHHHHHHHHHHSCCSEEEECCCCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCC
Confidence 99887 6899999999653
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.76 E-value=1.4e-08 Score=95.92 Aligned_cols=80 Identities=20% Similarity=0.240 Sum_probs=64.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh-HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT-RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~-kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..++|+||+|+||+.++++|++++ .+|++.+|+.+ .++.+.+.+.. ...++.++.+|++|+++++++++
T Consensus 8 k~vlVTGas~gIG~~~a~~l~~~G-------~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~ 79 (264)
T 3i4f_A 8 RHALITAGTKGLGKQVTEKLLAKG-------YSVTVTYHSDTTAMETMKETYKD-VEERLQFVQADVTKKEDLHKIVEEA 79 (264)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT-------CEEEEEESSCHHHHHHHHHHTGG-GGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred CEEEEeCCCchhHHHHHHHHHHCC-------CEEEEEcCCChHHHHHHHHHHHh-cCCceEEEEecCCCHHHHHHHHHHH
Confidence 369999999999999999999998 78988877654 44444443321 12467889999999999999887
Q ss_pred -----ccCeeEeccCC
Q 014694 88 -----QTKLLLNCVGP 98 (420)
Q Consensus 88 -----~~dvVIn~aGp 98 (420)
+.|+|||+||+
T Consensus 80 ~~~~g~id~lv~~Ag~ 95 (264)
T 3i4f_A 80 MSHFGKIDFLINNAGP 95 (264)
T ss_dssp HHHHSCCCEEECCCCC
T ss_pred HHHhCCCCEEEECCcc
Confidence 68999999994
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.75 E-value=1.7e-08 Score=93.77 Aligned_cols=81 Identities=22% Similarity=0.241 Sum_probs=67.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..|+|+||+|++|++++++|++++. .++|++.+|+.++++++.+ +. ..++.++.+|++|+++++++++
T Consensus 4 k~vlItGasggiG~~la~~l~~~g~-----~~~V~~~~r~~~~~~~l~~-~~---~~~~~~~~~D~~~~~~~~~~~~~~~ 74 (250)
T 1yo6_A 4 GSVVVTGANRGIGLGLVQQLVKDKN-----IRHIIATARDVEKATELKS-IK---DSRVHVLPLTVTCDKSLDTFVSKVG 74 (250)
T ss_dssp SEEEESSCSSHHHHHHHHHHHTCTT-----CCEEEEEESSGGGCHHHHT-CC---CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEecCCchHHHHHHHHHHhcCC-----CcEEEEEecCHHHHHHHHh-cc---CCceEEEEeecCCHHHHHHHHHHHH
Confidence 4799999999999999999999862 1589999999988766532 21 3467889999999999999887
Q ss_pred ------ccCeeEeccCCCC
Q 014694 88 ------QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 75 ~~~g~~~id~li~~Ag~~~ 93 (250)
T 1yo6_A 75 EIVGSDGLSLLINNAGVLL 93 (250)
T ss_dssp HHHGGGCCCEEEECCCCCC
T ss_pred HhcCCCCCcEEEECCcccC
Confidence 7999999999654
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=98.75 E-value=1.9e-08 Score=95.96 Aligned_cols=83 Identities=16% Similarity=0.101 Sum_probs=66.6
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhH-------HHHHHHHhCCCCCCCccEEEEeCCCHHHH
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR-------VKQALQWASPSHSLSIPILTADTTDPPSL 82 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~k-------l~~~~~~l~~~~~~~~~~i~~D~~d~~sl 82 (420)
...++|+||+|+||+.++++|++++ .+|++++|+.++ +++..+++.. ...++.++.+|++|++++
T Consensus 6 ~k~~lVTGas~GIG~aia~~la~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v 77 (274)
T 3e03_A 6 GKTLFITGASRGIGLAIALRAARDG-------ANVAIAAKSAVANPKLPGTIHSAAAAVNA-AGGQGLALKCDIREEDQV 77 (274)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCCSCCTTSCCCHHHHHHHHHH-HTSEEEEEECCTTCHHHH
T ss_pred CcEEEEECCCChHHHHHHHHHHHCC-------CEEEEEeccchhhhhhHHHHHHHHHHHHh-cCCeEEEEeCCCCCHHHH
Confidence 3479999999999999999999998 799999998754 4444443321 134677899999999999
Q ss_pred HHHHh-------ccCeeEeccCCCC
Q 014694 83 HRLCS-------QTKLLLNCVGPYR 100 (420)
Q Consensus 83 ~~~~~-------~~dvVIn~aGp~~ 100 (420)
+++++ +.|+|||+||...
T Consensus 78 ~~~~~~~~~~~g~iD~lvnnAG~~~ 102 (274)
T 3e03_A 78 RAAVAATVDTFGGIDILVNNASAIW 102 (274)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCccc
Confidence 99876 6799999999653
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.74 E-value=5.6e-09 Score=99.98 Aligned_cols=91 Identities=14% Similarity=0.138 Sum_probs=69.2
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
+.++|+|+|||||+|++++++|++++ . +.... ...+.++.+|++|++++.+++++
T Consensus 5 ~~~~vlVtGatG~iG~~l~~~L~~~g-------~------~~~~~------------~~~~~~~~~D~~d~~~~~~~~~~ 59 (319)
T 4b8w_A 5 QSMRILVTGGSGLVGKAIQKVVADGA-------G------LPGED------------WVFVSSKDADLTDTAQTRALFEK 59 (319)
T ss_dssp CCCEEEEETCSSHHHHHHHHHHHTTT-------C------CTTCE------------EEECCTTTCCTTSHHHHHHHHHH
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhcC-------C------ccccc------------ccccCceecccCCHHHHHHHHhh
Confidence 34689999999999999999999987 3 11000 11234457899999999999997
Q ss_pred --cCeeEeccCCCCC------C-----------cHHHHHHHHHcCC-cEEecCCcH
Q 014694 89 --TKLLLNCVGPYRL------H-----------GDPVAAACVHSGC-DYLDISGEP 124 (420)
Q Consensus 89 --~dvVIn~aGp~~~------~-----------~~~vv~Ac~~~g~-~yvdisge~ 124 (420)
+|+|||||++... . ..+++++|.+.++ ++|.+|...
T Consensus 60 ~~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~ 115 (319)
T 4b8w_A 60 VQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTC 115 (319)
T ss_dssp SCCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGG
T ss_pred cCCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchh
Confidence 9999999997531 0 1568999999998 577777643
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=98.73 E-value=2.4e-08 Score=94.77 Aligned_cols=79 Identities=16% Similarity=0.224 Sum_probs=66.9
Q ss_pred ceEEEEcC--CcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhH-HHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh
Q 014694 11 FDVIILGA--SGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR-VKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 11 ~~IvV~GA--TG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~k-l~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
..++|+|| +|+||+.++++|++++ .+|++.+|+.++ ++++.++++ .++.++.+|++|+++++++++
T Consensus 8 k~vlVTGa~~s~gIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~ 76 (269)
T 2h7i_A 8 KRILVSGIITDSSIAFHIARVAQEQG-------AQLVLTGFDRLRLIQRITDRLP----AKAPLLELDVQNEEHLASLAG 76 (269)
T ss_dssp CEEEECCCSSTTSHHHHHHHHHHHTT-------CEEEEEECSCHHHHHHHHTTSS----SCCCEEECCTTCHHHHHHHHH
T ss_pred CEEEEECCCCCCchHHHHHHHHHHCC-------CEEEEEecChHHHHHHHHHhcC----CCceEEEccCCCHHHHHHHHH
Confidence 46999999 9999999999999998 799999999876 456555442 367889999999999999887
Q ss_pred ----------ccCeeEeccCCCC
Q 014694 88 ----------QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----------~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 77 ~~~~~~g~~~~iD~lv~nAg~~~ 99 (269)
T 2h7i_A 77 RVTEAIGAGNKLDGVVHSIGFMP 99 (269)
T ss_dssp HHHHHHCTTCCEEEEEECCCCCC
T ss_pred HHHHHhCCCCCceEEEECCccCc
Confidence 7899999999653
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.73 E-value=1.7e-08 Score=98.63 Aligned_cols=82 Identities=15% Similarity=0.049 Sum_probs=68.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC----------hhHHHHHHHHhCCCCCCCccEEEEeCCCHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN----------PTRVKQALQWASPSHSLSIPILTADTTDPP 80 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs----------~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~ 80 (420)
..++|+||+|+||+.+++.|++++ .+|++.+|+ .++++++.+++.. ...++.++.+|++|++
T Consensus 28 k~vlVTGas~GIG~aia~~la~~G-------~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~d~~ 99 (322)
T 3qlj_A 28 RVVIVTGAGGGIGRAHALAFAAEG-------ARVVVNDIGVGLDGSPASGGSAAQSVVDEITA-AGGEAVADGSNVADWD 99 (322)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT-------CEEEEECCCBCTTSSBTCTTSHHHHHHHHHHH-TTCEEEEECCCTTSHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCcccccccccccHHHHHHHHHHHHh-cCCcEEEEECCCCCHH
Confidence 469999999999999999999998 899999998 6777777766631 2345778899999999
Q ss_pred HHHHHHh-------ccCeeEeccCCCC
Q 014694 81 SLHRLCS-------QTKLLLNCVGPYR 100 (420)
Q Consensus 81 sl~~~~~-------~~dvVIn~aGp~~ 100 (420)
+++++++ +.|+|||+||...
T Consensus 100 ~v~~~~~~~~~~~g~iD~lv~nAg~~~ 126 (322)
T 3qlj_A 100 QAAGLIQTAVETFGGLDVLVNNAGIVR 126 (322)
T ss_dssp HHHHHHHHHHHHHSCCCEEECCCCCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 9999887 6899999999754
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.72 E-value=1.5e-08 Score=99.51 Aligned_cols=82 Identities=13% Similarity=0.117 Sum_probs=69.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEe-cChhHHHHHHHHhCCCCCCCccEEEEeCCCHH---------
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAG-RNPTRVKQALQWASPSHSLSIPILTADTTDPP--------- 80 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iag-Rs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~--------- 80 (420)
..++|+||+|+||+.+++.|++++ ++|++++ |+.++++++.+++......++.++.+|++|++
T Consensus 47 k~~lVTGas~GIG~aia~~La~~G-------~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 119 (328)
T 2qhx_A 47 PVALVTGAAKRLGRSIAEGLHAEG-------YAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADG 119 (328)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTT-------CEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC------
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccc
Confidence 469999999999999999999998 7999999 99998888777652001246788999999999
Q ss_pred --------HHHHHHh-------ccCeeEeccCCC
Q 014694 81 --------SLHRLCS-------QTKLLLNCVGPY 99 (420)
Q Consensus 81 --------sl~~~~~-------~~dvVIn~aGp~ 99 (420)
+++++++ +.|+|||+||..
T Consensus 120 ~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~ 153 (328)
T 2qhx_A 120 SAPVTLFTRCAELVAACYTHWGRCDVLVNNASSF 153 (328)
T ss_dssp -CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred ccccccHHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 8888876 689999999964
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=98.72 E-value=3.9e-08 Score=92.96 Aligned_cols=77 Identities=13% Similarity=0.120 Sum_probs=63.6
Q ss_pred ceEEEEcCC--cHHHHHHHHHHHHhCCCCCCCcceEEEEecChh---HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 014694 11 FDVIILGAS--GFTGKYVVREALKLFNFPSSPIKSLALAGRNPT---RVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 11 ~~IvV~GAT--G~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~---kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~ 85 (420)
..++|+||+ |+||+.++++|++++ .+|++.+|+.+ .++++.++. ..+.++.+|++|+++++++
T Consensus 9 k~vlVTGas~~~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~l~~~~-----~~~~~~~~D~~~~~~v~~~ 76 (261)
T 2wyu_A 9 KKALVMGVTNQRSLGFAIAAKLKEAG-------AEVALSYQAERLRPEAEKLAEAL-----GGALLFRADVTQDEELDAL 76 (261)
T ss_dssp CEEEEESCCSSSSHHHHHHHHHHHHT-------CEEEEEESCGGGHHHHHHHHHHT-----TCCEEEECCTTCHHHHHHH
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHCC-------CEEEEEcCCHHHHHHHHHHHHhc-----CCcEEEECCCCCHHHHHHH
Confidence 479999999 999999999999998 79999999875 333333332 2367899999999999998
Q ss_pred Hh-------ccCeeEeccCCC
Q 014694 86 CS-------QTKLLLNCVGPY 99 (420)
Q Consensus 86 ~~-------~~dvVIn~aGp~ 99 (420)
++ +.|+|||+||..
T Consensus 77 ~~~~~~~~g~iD~lv~~Ag~~ 97 (261)
T 2wyu_A 77 FAGVKEAFGGLDYLVHAIAFA 97 (261)
T ss_dssp HHHHHHHHSSEEEEEECCCCC
T ss_pred HHHHHHHcCCCCEEEECCCCC
Confidence 87 679999999964
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.72 E-value=3.2e-08 Score=93.43 Aligned_cols=82 Identities=11% Similarity=0.030 Sum_probs=66.0
Q ss_pred CCCcceEEEEcCC--cHHHHHHHHHHHHhCCCCCCCcceEEEEecChhH---HHHHHHHhCCCCCCCccEEEEeCCCHHH
Q 014694 7 IPELFDVIILGAS--GFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR---VKQALQWASPSHSLSIPILTADTTDPPS 81 (420)
Q Consensus 7 ~~~~~~IvV~GAT--G~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~k---l~~~~~~l~~~~~~~~~~i~~D~~d~~s 81 (420)
..+...|+|+||+ |+||+.++++|++++ .+|++.+|+... ++++.++. .++.++.+|++|+++
T Consensus 11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~ 78 (271)
T 3ek2_A 11 FLDGKRILLTGLLSNRSIAYGIAKACKREG-------AELAFTYVGDRFKDRITEFAAEF-----GSELVFPCDVADDAQ 78 (271)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTT-------CEEEEEESSGGGHHHHHHHHHHT-----TCCCEEECCTTCHHH
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHHcC-------CCEEEEecchhhHHHHHHHHHHc-----CCcEEEECCCCCHHH
Confidence 3455689999999 999999999999998 799999998543 33333332 357899999999999
Q ss_pred HHHHHh-------ccCeeEeccCCCC
Q 014694 82 LHRLCS-------QTKLLLNCVGPYR 100 (420)
Q Consensus 82 l~~~~~-------~~dvVIn~aGp~~ 100 (420)
++++++ +.|+|||+||...
T Consensus 79 v~~~~~~~~~~~g~id~lv~nAg~~~ 104 (271)
T 3ek2_A 79 IDALFASLKTHWDSLDGLVHSIGFAP 104 (271)
T ss_dssp HHHHHHHHHHHCSCEEEEEECCCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCccCc
Confidence 999987 4699999999653
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=98.72 E-value=4.2e-08 Score=92.76 Aligned_cols=83 Identities=12% Similarity=0.111 Sum_probs=65.2
Q ss_pred ceEEEEcCCcH--HHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 11 FDVIILGASGF--TGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 11 ~~IvV~GATG~--~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
..++|+||+|+ ||+.++++|++++ .+|++.+|+....+.+.+........++.++.+|++|+++++++++
T Consensus 8 k~vlVTGasg~~GIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 80 (266)
T 3oig_A 8 RNIVVMGVANKRSIAWGIARSLHEAG-------ARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFAS 80 (266)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHHTT-------CEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHH
T ss_pred CEEEEEcCCCCCcHHHHHHHHHHHCC-------CEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHH
Confidence 47999999988 9999999999998 7999999987544333322211012368899999999999999887
Q ss_pred ------ccCeeEeccCCCC
Q 014694 88 ------QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (420)
..|+|||+||...
T Consensus 81 ~~~~~g~id~li~~Ag~~~ 99 (266)
T 3oig_A 81 IKEQVGVIHGIAHCIAFAN 99 (266)
T ss_dssp HHHHHSCCCEEEECCCCCC
T ss_pred HHHHhCCeeEEEEcccccc
Confidence 5799999999653
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=98.72 E-value=3.3e-08 Score=94.47 Aligned_cols=79 Identities=11% Similarity=0.062 Sum_probs=65.7
Q ss_pred cceEEEEcCCcH--HHHHHHHHHHHhCCCCCCCcceEEEEecCh--hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 014694 10 LFDVIILGASGF--TGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 10 ~~~IvV~GATG~--~G~~va~~L~~~~~~~~~~~~~v~iagRs~--~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~ 85 (420)
...++|+||+|+ ||+.++++|++++ .+|++.+|+. +.++++.++. .++.++.+|++|.++++++
T Consensus 26 ~k~vlVTGasg~~GIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~l~~~~-----~~~~~~~~Dl~~~~~v~~~ 93 (280)
T 3nrc_A 26 GKKILITGLLSNKSIAYGIAKAMHREG-------AELAFTYVGQFKDRVEKLCAEF-----NPAAVLPCDVISDQEIKDL 93 (280)
T ss_dssp TCEEEECCCCSTTCHHHHHHHHHHHTT-------CEEEEEECTTCHHHHHHHHGGG-----CCSEEEECCTTCHHHHHHH
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHcC-------CEEEEeeCchHHHHHHHHHHhc-----CCceEEEeecCCHHHHHHH
Confidence 347999999966 9999999999998 7999999987 5555554443 3578999999999999998
Q ss_pred Hhc-------cCeeEeccCCCC
Q 014694 86 CSQ-------TKLLLNCVGPYR 100 (420)
Q Consensus 86 ~~~-------~dvVIn~aGp~~ 100 (420)
++. .|+|||+||...
T Consensus 94 ~~~~~~~~g~id~li~nAg~~~ 115 (280)
T 3nrc_A 94 FVELGKVWDGLDAIVHSIAFAP 115 (280)
T ss_dssp HHHHHHHCSSCCEEEECCCCCC
T ss_pred HHHHHHHcCCCCEEEECCccCC
Confidence 874 599999999754
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=98.72 E-value=3.9e-08 Score=94.96 Aligned_cols=82 Identities=13% Similarity=0.037 Sum_probs=64.5
Q ss_pred cceEEEEcCCc--HHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh
Q 014694 10 LFDVIILGASG--FTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 10 ~~~IvV~GATG--~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
...++|+||+| +||+.+++.|++++ .+|++.+|+.+..+.+.+... ....+.++.+|++|+++++++++
T Consensus 30 ~k~vlVTGasg~~GIG~~ia~~la~~G-------~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dv~d~~~v~~~~~ 100 (296)
T 3k31_A 30 GKKGVIIGVANDKSLAWGIAKAVCAQG-------AEVALTYLSETFKKRVDPLAE--SLGVKLTVPCDVSDAESVDNMFK 100 (296)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHTT-------CEEEEEESSGGGHHHHHHHHH--HHTCCEEEECCTTCHHHHHHHHH
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHCC-------CEEEEEeCChHHHHHHHHHHH--hcCCeEEEEcCCCCHHHHHHHHH
Confidence 34799999997 99999999999998 799999999765443332211 01246789999999999999887
Q ss_pred -------ccCeeEeccCCCC
Q 014694 88 -------QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -------~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 101 ~~~~~~g~iD~lVnnAG~~~ 120 (296)
T 3k31_A 101 VLAEEWGSLDFVVHAVAFSD 120 (296)
T ss_dssp HHHHHHSCCSEEEECCCCCC
T ss_pred HHHHHcCCCCEEEECCCcCC
Confidence 5699999999653
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=98.72 E-value=2.1e-08 Score=94.48 Aligned_cols=82 Identities=18% Similarity=0.216 Sum_probs=67.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHH---hCCCCCCCcceEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHH
Q 014694 11 FDVIILGASGFTGKYVVREALK---LFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~---~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~-~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
..++|+||+|+||+.++++|++ ++ .+|++.+|+.++++++.+++... ...++.++.+|++|++++++++
T Consensus 7 k~~lVTGas~gIG~~ia~~l~~~~~~G-------~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~ 79 (259)
T 1oaa_A 7 AVCVLTGASRGFGRALAPQLARLLSPG-------SVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLL 79 (259)
T ss_dssp EEEEESSCSSHHHHHHHHHHHTTBCTT-------CEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHH
T ss_pred cEEEEeCCCChHHHHHHHHHHHhhcCC-------CeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHH
Confidence 4699999999999999999998 66 79999999999988877766310 1235778999999999998887
Q ss_pred hc---------cC--eeEeccCCC
Q 014694 87 SQ---------TK--LLLNCVGPY 99 (420)
Q Consensus 87 ~~---------~d--vVIn~aGp~ 99 (420)
+. .| +|||+||..
T Consensus 80 ~~~~~~~~~g~~d~~~lvnnAg~~ 103 (259)
T 1oaa_A 80 SAVRELPRPEGLQRLLLINNAATL 103 (259)
T ss_dssp HHHHHSCCCTTCCEEEEEECCCCC
T ss_pred HHHHhccccccCCccEEEECCccc
Confidence 53 47 999999964
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=98.71 E-value=3.6e-08 Score=93.72 Aligned_cols=82 Identities=11% Similarity=0.094 Sum_probs=67.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEec-ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagR-s~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..++|+||+|+||+.++++|++++ .+|++.+| +.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 19 k~~lVTGas~gIG~aia~~l~~~G-------~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~ 90 (270)
T 3is3_A 19 KVALVTGSGRGIGAAVAVHLGRLG-------AKVVVNYANSTKDAEKVVSEIKA-LGSDAIAIKADIRQVPEIVKLFDQA 90 (270)
T ss_dssp CEEEESCTTSHHHHHHHHHHHHTT-------CEEEEEESSCHHHHHHHHHHHHH-TTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCC-------CEEEEEcCCCHHHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 469999999999999999999998 78888765 56667666665531 23567889999999999999887
Q ss_pred -----ccCeeEeccCCCC
Q 014694 88 -----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 91 ~~~~g~id~lvnnAg~~~ 108 (270)
T 3is3_A 91 VAHFGHLDIAVSNSGVVS 108 (270)
T ss_dssp HHHHSCCCEEECCCCCCC
T ss_pred HHHcCCCCEEEECCCCCC
Confidence 5799999999753
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.70 E-value=1.8e-08 Score=91.10 Aligned_cols=74 Identities=27% Similarity=0.321 Sum_probs=64.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
+.|+|+||+|++|++++++|+++ +|++.+|+.++++++.+++. . .++.+|++|+++++++++
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~---------~V~~~~r~~~~~~~~~~~~~-----~-~~~~~D~~~~~~~~~~~~~~~ 65 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH---------DLLLSGRRAGALAELAREVG-----A-RALPADLADELEAKALLEEAG 65 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS---------EEEEECSCHHHHHHHHHHHT-----C-EECCCCTTSHHHHHHHHHHHC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC---------CEEEEECCHHHHHHHHHhcc-----C-cEEEeeCCCHHHHHHHHHhcC
Confidence 36999999999999999999764 58889999999888877663 1 778899999999999998
Q ss_pred ccCeeEeccCCC
Q 014694 88 QTKLLLNCVGPY 99 (420)
Q Consensus 88 ~~dvVIn~aGp~ 99 (420)
+.|+|||++|..
T Consensus 66 ~id~vi~~ag~~ 77 (207)
T 2yut_A 66 PLDLLVHAVGKA 77 (207)
T ss_dssp SEEEEEECCCCC
T ss_pred CCCEEEECCCcC
Confidence 899999999964
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=98.69 E-value=3.4e-08 Score=97.83 Aligned_cols=79 Identities=20% Similarity=0.235 Sum_probs=64.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcc-eEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIK-SLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~-~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
|+|+|+|||||+|++++++|++++ . +|...+|+ .|++++.++++++
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g-------~~~v~~~d~~--------------------------~d~~~l~~~~~~~ 47 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTT-------DHHIFEVHRQ--------------------------TKEEELESALLKA 47 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHC-------CCEEEECCTT--------------------------CCHHHHHHHHHHC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC-------CCEEEEECCC--------------------------CCHHHHHHHhccC
Confidence 589999999999999999999997 4 66655553 5788899999999
Q ss_pred CeeEeccCCCCCC------------cHHHHHHHHHcCC--cEEecCC
Q 014694 90 KLLLNCVGPYRLH------------GDPVAAACVHSGC--DYLDISG 122 (420)
Q Consensus 90 dvVIn~aGp~~~~------------~~~vv~Ac~~~g~--~yvdisg 122 (420)
|+|||+||..... ..+++++|.++++ ++|.+|.
T Consensus 48 d~Vih~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss 94 (369)
T 3st7_A 48 DFIVHLAGVNRPEHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSS 94 (369)
T ss_dssp SEEEECCCSBCTTCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEE
T ss_pred CEEEECCcCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCc
Confidence 9999999965321 2789999999985 5777764
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=98.68 E-value=5.8e-08 Score=92.44 Aligned_cols=78 Identities=15% Similarity=0.122 Sum_probs=64.1
Q ss_pred ceEEEEcCC--cHHHHHHHHHHHHhCCCCCCCcceEEEEecChh---HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 014694 11 FDVIILGAS--GFTGKYVVREALKLFNFPSSPIKSLALAGRNPT---RVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 11 ~~IvV~GAT--G~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~---kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~ 85 (420)
..++|+||+ |+||+.++++|++++ .+|++.+|+.+ .++++.++. ..+.++.+|++|+++++++
T Consensus 7 k~vlVTGas~~~gIG~~~a~~l~~~G-------~~V~~~~r~~~~~~~~~~l~~~~-----~~~~~~~~D~~~~~~v~~~ 74 (275)
T 2pd4_A 7 KKGLIVGVANNKSIAYGIAQSCFNQG-------ATLAFTYLNESLEKRVRPIAQEL-----NSPYVYELDVSKEEHFKSL 74 (275)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHTTT-------CEEEEEESSTTTHHHHHHHHHHT-----TCCCEEECCTTCHHHHHHH
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHhc-----CCcEEEEcCCCCHHHHHHH
Confidence 479999999 999999999999998 79999999876 333333332 2378899999999999998
Q ss_pred Hh-------ccCeeEeccCCCC
Q 014694 86 CS-------QTKLLLNCVGPYR 100 (420)
Q Consensus 86 ~~-------~~dvVIn~aGp~~ 100 (420)
++ +.|+|||+||...
T Consensus 75 ~~~~~~~~g~id~lv~nAg~~~ 96 (275)
T 2pd4_A 75 YNSVKKDLGSLDFIVHSVAFAP 96 (275)
T ss_dssp HHHHHHHTSCEEEEEECCCCCC
T ss_pred HHHHHHHcCCCCEEEECCccCc
Confidence 87 5699999999653
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=98.68 E-value=3.5e-08 Score=94.94 Aligned_cols=80 Identities=14% Similarity=0.145 Sum_probs=68.9
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
..+++|+||+|++|+.+++.|++.+ .+|.+++|+.++++++.+++.. ..++.++.+|++|++++.++++++
T Consensus 119 gk~vlVtGaaGGiG~aia~~L~~~G-------~~V~i~~R~~~~~~~l~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~ 189 (287)
T 1lu9_A 119 GKKAVVLAGTGPVGMRSAALLAGEG-------AEVVLCGRKLDKAQAAADSVNK--RFKVNVTAAETADDASRAEAVKGA 189 (287)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTT-------CEEEEEESSHHHHHHHHHHHHH--HHTCCCEEEECCSHHHHHHHTTTC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCc-------CEEEEEECCHHHHHHHHHHHHh--cCCcEEEEecCCCHHHHHHHHHhC
Confidence 3579999999999999999999998 6899999999998888776531 124567889999999999999999
Q ss_pred CeeEeccCC
Q 014694 90 KLLLNCVGP 98 (420)
Q Consensus 90 dvVIn~aGp 98 (420)
|+||||+|.
T Consensus 190 DvlVn~ag~ 198 (287)
T 1lu9_A 190 HFVFTAGAI 198 (287)
T ss_dssp SEEEECCCT
T ss_pred CEEEECCCc
Confidence 999999974
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.68 E-value=6.8e-08 Score=92.46 Aligned_cols=78 Identities=13% Similarity=0.103 Sum_probs=63.7
Q ss_pred ceEEEEcCC--cHHHHHHHHHHHHhCCCCCCCcceEEEEecChh---HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 014694 11 FDVIILGAS--GFTGKYVVREALKLFNFPSSPIKSLALAGRNPT---RVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 11 ~~IvV~GAT--G~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~---kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~ 85 (420)
..++|+||+ |+||+.+++.|++++ .+|++.+|+.+ .++++.++. ..+.++.+|++|+++++++
T Consensus 22 k~vlVTGas~~~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~l~~~~-----~~~~~~~~Dl~~~~~v~~~ 89 (285)
T 2p91_A 22 KRALITGVANERSIAYGIAKSFHREG-------AQLAFTYATPKLEKRVREIAKGF-----GSDLVVKCDVSLDEDIKNL 89 (285)
T ss_dssp CEEEECCCSSTTSHHHHHHHHHHHTT-------CEEEEEESSGGGHHHHHHHHHHT-----TCCCEEECCTTCHHHHHHH
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHHHhc-----CCeEEEEcCCCCHHHHHHH
Confidence 469999999 999999999999998 79999999875 333333322 2367899999999999998
Q ss_pred Hh-------ccCeeEeccCCCC
Q 014694 86 CS-------QTKLLLNCVGPYR 100 (420)
Q Consensus 86 ~~-------~~dvVIn~aGp~~ 100 (420)
++ +.|+|||+||...
T Consensus 90 ~~~~~~~~g~iD~lv~~Ag~~~ 111 (285)
T 2p91_A 90 KKFLEENWGSLDIIVHSIAYAP 111 (285)
T ss_dssp HHHHHHHTSCCCEEEECCCCCC
T ss_pred HHHHHHHcCCCCEEEECCCCCC
Confidence 87 5799999999653
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=98.67 E-value=5.6e-08 Score=91.97 Aligned_cols=78 Identities=14% Similarity=0.130 Sum_probs=63.2
Q ss_pred ceEEEEcCC--cHHHHHHHHHHHHhCCCCCCCcceEEEEecCh---hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 014694 11 FDVIILGAS--GFTGKYVVREALKLFNFPSSPIKSLALAGRNP---TRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 11 ~~IvV~GAT--G~~G~~va~~L~~~~~~~~~~~~~v~iagRs~---~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~ 85 (420)
..++|+||+ |+||+.++++|++++ ++|++.+|+. +.++++.++.+ ...++.+|++|+++++++
T Consensus 10 k~vlVTGas~~~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~l~~~~~-----~~~~~~~D~~~~~~v~~~ 77 (265)
T 1qsg_A 10 KRILVTGVASKLSIAYGIAQAMHREG-------AELAFTYQNDKLKGRVEEFAAQLG-----SDIVLQCDVAEDASIDTM 77 (265)
T ss_dssp CEEEECCCCSTTSHHHHHHHHHHHTT-------CEEEEEESSTTTHHHHHHHHHHTT-----CCCEEECCTTCHHHHHHH
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHCC-------CEEEEEcCcHHHHHHHHHHHHhcC-----CcEEEEccCCCHHHHHHH
Confidence 469999999 999999999999998 7999999987 33333333322 347899999999999998
Q ss_pred Hh-------ccCeeEeccCCCC
Q 014694 86 CS-------QTKLLLNCVGPYR 100 (420)
Q Consensus 86 ~~-------~~dvVIn~aGp~~ 100 (420)
++ +.|+|||+||...
T Consensus 78 ~~~~~~~~g~iD~lv~~Ag~~~ 99 (265)
T 1qsg_A 78 FAELGKVWPKFDGFVHSIGFAP 99 (265)
T ss_dssp HHHHHTTCSSEEEEEECCCCCC
T ss_pred HHHHHHHcCCCCEEEECCCCCC
Confidence 87 5799999999653
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=98.67 E-value=3.8e-08 Score=93.68 Aligned_cols=75 Identities=15% Similarity=0.073 Sum_probs=62.5
Q ss_pred CCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh
Q 014694 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 8 ~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
.+...|+|+||+|+||+.++++|++++ .+|++.+|+.+++ ......+.+|++|+++++++++
T Consensus 12 ~~~k~vlVTGas~GIG~aia~~l~~~G-------~~V~~~~r~~~~~-----------~~~~~~~~~Dv~~~~~v~~~~~ 73 (269)
T 3vtz_A 12 FTDKVAIVTGGSSGIGLAVVDALVRYG-------AKVVSVSLDEKSD-----------VNVSDHFKIDVTNEEEVKEAVE 73 (269)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTT-------CEEEEEESCC--C-----------TTSSEEEECCTTCHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEeCCchhc-----------cCceeEEEecCCCHHHHHHHHH
Confidence 344579999999999999999999998 7999999987654 1245788999999999999887
Q ss_pred -------ccCeeEeccCCCC
Q 014694 88 -------QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -------~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 74 ~~~~~~g~iD~lv~nAg~~~ 93 (269)
T 3vtz_A 74 KTTKKYGRIDILVNNAGIEQ 93 (269)
T ss_dssp HHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHcCCCCEEEECCCcCC
Confidence 6899999999643
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=98.67 E-value=1.8e-08 Score=93.84 Aligned_cols=68 Identities=12% Similarity=0.096 Sum_probs=58.3
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh----
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~---- 87 (420)
+|+|+||||++|++++++|++++ ++|++++|+.++++ . . +.+|++|+++++++++
T Consensus 3 ~vlVtGasg~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~-----------~--~-~~~D~~~~~~~~~~~~~~~~ 61 (255)
T 2dkn_A 3 VIAITGSASGIGAALKELLARAG-------HTVIGIDRGQADIE-----------A--D-LSTPGGRETAVAAVLDRCGG 61 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESSSSSEE-----------C--C-TTSHHHHHHHHHHHHHHHTT
T ss_pred EEEEeCCCcHHHHHHHHHHHhCC-------CEEEEEeCChhHcc-----------c--c-ccCCcccHHHHHHHHHHcCC
Confidence 69999999999999999999987 79999999876541 0 1 4579999999999987
Q ss_pred ccCeeEeccCCCC
Q 014694 88 QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ~~dvVIn~aGp~~ 100 (420)
++|+|||+||...
T Consensus 62 ~~d~vi~~Ag~~~ 74 (255)
T 2dkn_A 62 VLDGLVCCAGVGV 74 (255)
T ss_dssp CCSEEEECCCCCT
T ss_pred CccEEEECCCCCC
Confidence 8999999999754
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=98.66 E-value=6.9e-08 Score=99.89 Aligned_cols=84 Identities=15% Similarity=0.154 Sum_probs=67.0
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh---HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT---RVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~---kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
...++|+||+|+||+.++++|++++. .+|++.+|+.. +++++.+++.. ...++.++.+|++|++++.+++
T Consensus 226 ~~~vLITGgtGgIG~~la~~La~~G~------~~vvl~~R~~~~~~~~~~l~~~l~~-~g~~v~~~~~Dv~d~~~v~~~~ 298 (486)
T 2fr1_A 226 TGTVLVTGGTGGVGGQIARWLARRGA------PHLLLVSRSGPDADGAGELVAELEA-LGARTTVAACDVTDRESVRELL 298 (486)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHTC------SEEEEEESSGGGSTTHHHHHHHHHH-TTCEEEEEECCTTCHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC------CEEEEEcCCCCCcHHHHHHHHHHHh-cCCEEEEEEeCCCCHHHHHHHH
Confidence 45799999999999999999999981 25999999874 44555544421 1346788999999999999999
Q ss_pred hcc------CeeEeccCCCC
Q 014694 87 SQT------KLLLNCVGPYR 100 (420)
Q Consensus 87 ~~~------dvVIn~aGp~~ 100 (420)
+++ |+|||++|...
T Consensus 299 ~~i~~~g~ld~VIh~AG~~~ 318 (486)
T 2fr1_A 299 GGIGDDVPLSAVFHAAATLD 318 (486)
T ss_dssp HTSCTTSCEEEEEECCCCCC
T ss_pred HHHHhcCCCcEEEECCccCC
Confidence 876 99999999654
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.66 E-value=1.4e-07 Score=88.50 Aligned_cols=72 Identities=17% Similarity=0.184 Sum_probs=61.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|+||+.++++|++++ .+|++.+|+.+. . ...+.++.+|++|+++++++++
T Consensus 8 k~vlVTGas~giG~~ia~~l~~~G-------~~V~~~~r~~~~--------~---~~~~~~~~~D~~d~~~~~~~~~~~~ 69 (250)
T 2fwm_X 8 KNVWVTGAGKGIGYATALAFVEAG-------AKVTGFDQAFTQ--------E---QYPFATEVMDVADAAQVAQVCQRLL 69 (250)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-------CEEEEEESCCCS--------S---CCSSEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEeCchhh--------h---cCCceEEEcCCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 799999998652 1 1126788999999999999887
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 70 ~~~g~id~lv~~Ag~~~ 86 (250)
T 2fwm_X 70 AETERLDALVNAAGILR 86 (250)
T ss_dssp HHCSCCCEEEECCCCCC
T ss_pred HHcCCCCEEEECCCcCC
Confidence 6899999999643
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=98.66 E-value=4.4e-08 Score=92.25 Aligned_cols=75 Identities=15% Similarity=0.161 Sum_probs=64.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|+||+.++++|++++ .+|++.+|+.+++ .++++ .++.++.+|++|+++++++++
T Consensus 10 k~vlVTGas~gIG~aia~~l~~~G-------~~V~~~~r~~~~~---~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~ 75 (257)
T 3tl3_A 10 AVAVVTGGASGLGLATTKRLLDAG-------AQVVVLDIRGEDV---VADLG----DRARFAAADVTDEAAVASALDLAE 75 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHT-------CEEEEEESSCHHH---HHHTC----TTEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEeCchHHH---HHhcC----CceEEEECCCCCHHHHHHHHHHHH
Confidence 469999999999999999999998 7999999976544 33342 467889999999999999887
Q ss_pred ---ccCeeEeccCCC
Q 014694 88 ---QTKLLLNCVGPY 99 (420)
Q Consensus 88 ---~~dvVIn~aGp~ 99 (420)
+.|+|||+||..
T Consensus 76 ~~g~id~lv~nAg~~ 90 (257)
T 3tl3_A 76 TMGTLRIVVNCAGTG 90 (257)
T ss_dssp HHSCEEEEEECGGGS
T ss_pred HhCCCCEEEECCCCC
Confidence 789999999964
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=98.66 E-value=1.6e-07 Score=87.38 Aligned_cols=72 Identities=18% Similarity=0.182 Sum_probs=59.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|++|+.++++|++++ ++|++.+|+.+++ .+++ .+.++.+|++| ++++++++
T Consensus 3 k~vlVTGas~giG~~~a~~l~~~G-------~~V~~~~r~~~~~---~~~~------~~~~~~~D~~~-~~~~~~~~~~~ 65 (239)
T 2ekp_A 3 RKALVTGGSRGIGRAIAEALVARG-------YRVAIASRNPEEA---AQSL------GAVPLPTDLEK-DDPKGLVKRAL 65 (239)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESSCHHH---HHHH------TCEEEECCTTT-SCHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHH---HHhh------CcEEEecCCch-HHHHHHHHHHH
Confidence 369999999999999999999998 7999999998763 3333 25778999999 87777654
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
+.|+|||+||..
T Consensus 66 ~~~g~id~lv~~Ag~~ 81 (239)
T 2ekp_A 66 EALGGLHVLVHAAAVN 81 (239)
T ss_dssp HHHTSCCEEEECCCCC
T ss_pred HHcCCCCEEEECCCCC
Confidence 689999999964
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=98.65 E-value=6.2e-08 Score=91.91 Aligned_cols=71 Identities=17% Similarity=0.126 Sum_probs=61.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|+||+.+++.|++++ .+|++.+|+.++ ..++.++.+|++|+++++++++
T Consensus 9 k~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~------------~~~~~~~~~Dl~~~~~v~~~~~~~~ 69 (264)
T 2dtx_A 9 KVVIVTGASMGIGRAIAERFVDEG-------SKVIDLSIHDPG------------EAKYDHIECDVTNPDQVKASIDHIF 69 (264)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTT-------CEEEEEESSCCC------------SCSSEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEecCccc------------CCceEEEEecCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 799999998655 1357889999999999999887
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 70 ~~~g~iD~lv~~Ag~~~ 86 (264)
T 2dtx_A 70 KEYGSISVLVNNAGIES 86 (264)
T ss_dssp HHHSCCCEEEECCCCCC
T ss_pred HHcCCCCEEEECCCCCC
Confidence 6899999999643
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.65 E-value=6.1e-08 Score=93.49 Aligned_cols=82 Identities=12% Similarity=0.071 Sum_probs=64.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh--hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~--~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
..++|+||+|+||+.++++|++++ .+|++.+|+. ++++++.+.+.. ...++.++.+|++|+++++++++
T Consensus 50 k~vlVTGas~GIG~aia~~la~~G-------~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~ 121 (294)
T 3r3s_A 50 RKALVTGGDSGIGRAAAIAYAREG-------ADVAINYLPAEEEDAQQVKALIEE-CGRKAVLLPGDLSDESFARSLVHK 121 (294)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEECCGGGHHHHHHHHHHHHH-TTCCEEECCCCTTSHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEeCCcchhHHHHHHHHHHH-cCCcEEEEEecCCCHHHHHHHHHH
Confidence 479999999999999999999998 7899999873 344444443321 13467788999999999988876
Q ss_pred ------ccCeeEeccCCCC
Q 014694 88 ------QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 122 ~~~~~g~iD~lv~nAg~~~ 140 (294)
T 3r3s_A 122 AREALGGLDILALVAGKQT 140 (294)
T ss_dssp HHHHHTCCCEEEECCCCCC
T ss_pred HHHHcCCCCEEEECCCCcC
Confidence 6799999999643
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=98.64 E-value=5.7e-08 Score=91.39 Aligned_cols=77 Identities=23% Similarity=0.240 Sum_probs=65.8
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
...++||||++.||+.+++.|+++| .+|++.+|+.+++++. ...++..+.+|++|+++++++++
T Consensus 11 GK~alVTGas~GIG~aia~~la~~G-------a~Vv~~~~~~~~~~~~-------~~~~~~~~~~Dv~~~~~v~~~~~~~ 76 (242)
T 4b79_A 11 GQQVLVTGGSSGIGAAIAMQFAELG-------AEVVALGLDADGVHAP-------RHPRIRREELDITDSQRLQRLFEAL 76 (242)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESSTTSTTSC-------CCTTEEEEECCTTCHHHHHHHHHHC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHhhh-------hcCCeEEEEecCCCHHHHHHHHHhc
Confidence 4579999999999999999999998 8999999998876421 23567889999999999999887
Q ss_pred -ccCeeEeccCCCC
Q 014694 88 -QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -~~dvVIn~aGp~~ 100 (420)
+.|++||+||...
T Consensus 77 g~iDiLVNNAGi~~ 90 (242)
T 4b79_A 77 PRLDVLVNNAGISR 90 (242)
T ss_dssp SCCSEEEECCCCCC
T ss_pred CCCCEEEECCCCCC
Confidence 5799999999643
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.64 E-value=4.8e-08 Score=90.43 Aligned_cols=70 Identities=9% Similarity=0.015 Sum_probs=61.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..|+|+||+|++|+.++++|++++ ++|++.+|+.+ + .++.++.+|++|+++++++++
T Consensus 3 k~vlVtGasggiG~~la~~l~~~G-------~~V~~~~r~~~-~------------~~~~~~~~D~~~~~~~~~~~~~~~ 62 (242)
T 1uay_A 3 RSALVTGGASGLGRAAALALKARG-------YRVVVLDLRRE-G------------EDLIYVEGDVTREEDVRRAVARAQ 62 (242)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHT-------CEEEEEESSCC-S------------SSSEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCC-------CEEEEEccCcc-c------------cceEEEeCCCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 79999999865 2 235789999999999999988
Q ss_pred ---ccCeeEeccCCCC
Q 014694 88 ---QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ---~~dvVIn~aGp~~ 100 (420)
+.|+|||++|...
T Consensus 63 ~~~~~d~li~~ag~~~ 78 (242)
T 1uay_A 63 EEAPLFAVVSAAGVGL 78 (242)
T ss_dssp HHSCEEEEEECCCCCC
T ss_pred hhCCceEEEEcccccC
Confidence 7899999999643
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=98.64 E-value=2.5e-07 Score=87.83 Aligned_cols=81 Identities=12% Similarity=0.030 Sum_probs=65.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++||||++.||+.+++.|++++ .+|++.+|+.++.+.+ +++.. ...++..+.+|++|+++++++++
T Consensus 8 KvalVTGas~GIG~aia~~la~~G-------a~Vv~~~r~~~~~~~~-~~~~~-~~~~~~~~~~Dv~~~~~v~~~v~~~~ 78 (258)
T 4gkb_A 8 KVVIVTGGASGIGGAISMRLAEER-------AIPVVFARHAPDGAFL-DALAQ-RQPRATYLPVELQDDAQCRDAVAQTI 78 (258)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESSCCCHHHH-HHHHH-HCTTCEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcC-------CEEEEEECCcccHHHH-HHHHh-cCCCEEEEEeecCCHHHHHHHHHHHH
Confidence 469999999999999999999998 8999999987765332 22210 13567889999999999988876
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
+.|++||+||...
T Consensus 79 ~~~G~iDiLVNnAGi~~ 95 (258)
T 4gkb_A 79 ATFGRLDGLVNNAGVND 95 (258)
T ss_dssp HHHSCCCEEEECCCCCC
T ss_pred HHhCCCCEEEECCCCCC
Confidence 5799999999643
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=98.63 E-value=4.8e-08 Score=92.23 Aligned_cols=70 Identities=16% Similarity=0.174 Sum_probs=61.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~-- 88 (420)
..++|+||+|+||+.++++|++++ .+|++.+|+.+++ ..+.++.+|++|++++++++++
T Consensus 22 k~vlVTGas~gIG~aia~~l~~~G-------~~V~~~~r~~~~~------------~~~~~~~~Dl~d~~~v~~~~~~~~ 82 (253)
T 2nm0_A 22 RSVLVTGGNRGIGLAIARAFADAG-------DKVAITYRSGEPP------------EGFLAVKCDITDTEQVEQAYKEIE 82 (253)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESSSCCC------------TTSEEEECCTTSHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEeCChHhh------------ccceEEEecCCCHHHHHHHHHHHH
Confidence 469999999999999999999998 7999999987654 2367889999999999998875
Q ss_pred -----cCeeEeccCCC
Q 014694 89 -----TKLLLNCVGPY 99 (420)
Q Consensus 89 -----~dvVIn~aGp~ 99 (420)
.|+|||+||..
T Consensus 83 ~~~g~iD~lv~nAg~~ 98 (253)
T 2nm0_A 83 ETHGPVEVLIANAGVT 98 (253)
T ss_dssp HHTCSCSEEEEECSCC
T ss_pred HHcCCCCEEEECCCCC
Confidence 59999999964
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.63 E-value=4.3e-08 Score=94.10 Aligned_cols=61 Identities=20% Similarity=0.210 Sum_probs=47.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
|+|+|||||||||++++++|+++| ++|.+..|++++. -+..| +...+.+.++|
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G-------~~V~~l~R~~~~~----------------~~~~~----~~~~~~l~~~d 53 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARG-------HEVTLVSRKPGPG----------------RITWD----ELAASGLPSCD 53 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESSCCTT----------------EEEHH----HHHHHCCCSCS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEECCCCcC----------------eeecc----hhhHhhccCCC
Confidence 789999999999999999999998 8999999975431 11112 22344567899
Q ss_pred eeEeccCC
Q 014694 91 LLLNCVGP 98 (420)
Q Consensus 91 vVIn~aGp 98 (420)
.|||++|.
T Consensus 54 ~vihla~~ 61 (298)
T 4b4o_A 54 AAVNLAGE 61 (298)
T ss_dssp EEEECCCC
T ss_pred EEEEeccC
Confidence 99999984
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=98.62 E-value=5.2e-08 Score=91.26 Aligned_cols=82 Identities=16% Similarity=0.099 Sum_probs=66.8
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEE-ecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA-GRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~ia-gRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
...++|+||+|+||+.++++|++++ .+|++. +|+.+++++..+++.. ...++.++.+|++|.++++++++.
T Consensus 7 ~k~vlITGas~gIG~~~a~~l~~~G-------~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~ 78 (255)
T 3icc_A 7 GKVALVTGASRGIGRAIAKRLANDG-------ALVAIHYGNRKEEAEETVYEIQS-NGGSAFSIGANLESLHGVEALYSS 78 (255)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTT-------CEEEEEESSCSHHHHHHHHHHHH-TTCEEEEEECCTTSHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC-------CeEEEEeCCchHHHHHHHHHHHh-cCCceEEEecCcCCHHHHHHHHHH
Confidence 4579999999999999999999998 678774 7788888777766532 234567889999999999888763
Q ss_pred -------------cCeeEeccCCC
Q 014694 89 -------------TKLLLNCVGPY 99 (420)
Q Consensus 89 -------------~dvVIn~aGp~ 99 (420)
.|+|||+||..
T Consensus 79 ~~~~~~~~~~~~~id~lv~nAg~~ 102 (255)
T 3icc_A 79 LDNELQNRTGSTKFDILINNAGIG 102 (255)
T ss_dssp HHHHHHHHHSSSCEEEEEECCCCC
T ss_pred HHHHhcccccCCcccEEEECCCCC
Confidence 89999999964
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=98.61 E-value=2.6e-08 Score=92.99 Aligned_cols=72 Identities=13% Similarity=0.086 Sum_probs=60.7
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
...++|+||+|+||+.++++|++++ ++|++.+|+.++++ ....++.+|++|+++++++++
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~-----------~~~~~~~~D~~~~~~v~~~~~~~ 68 (241)
T 1dhr_A 7 ARRVLVYGGRGALGSRCVQAFRARN-------WWVASIDVVENEEA-----------SASVIVKMTDSFTEQADQVTAEV 68 (241)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTT-------CEEEEEESSCCTTS-----------SEEEECCCCSCHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCC-------CEEEEEeCChhhcc-----------CCcEEEEcCCCCHHHHHHHHHHH
Confidence 3479999999999999999999998 79999999876542 123567899999999988876
Q ss_pred -------ccCeeEeccCCC
Q 014694 88 -------QTKLLLNCVGPY 99 (420)
Q Consensus 88 -------~~dvVIn~aGp~ 99 (420)
+.|+|||+||..
T Consensus 69 ~~~~~~g~iD~lv~~Ag~~ 87 (241)
T 1dhr_A 69 GKLLGDQKVDAILCVAGGW 87 (241)
T ss_dssp HHHHTTCCEEEEEECCCCC
T ss_pred HHHhCCCCCCEEEEccccc
Confidence 689999999964
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=98.60 E-value=6.5e-09 Score=100.16 Aligned_cols=94 Identities=14% Similarity=0.156 Sum_probs=67.3
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh----HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT----RVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~----kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~ 85 (420)
.++|+|+|||||+|++++++|++++ ++|.+.+|+.+ ..+.+. .+. ...++.++.+|+.
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~-~~~--~~~~~~~~~~Dl~-------- 68 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASG-------EEVTVLDDLRVPPMIPPEGTG-KFL--EKPVLELEERDLS-------- 68 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-------CCEEEECCCSSCCSSCCTTSS-EEE--CSCGGGCCHHHHT--------
T ss_pred CCeEEEECCCChHHHHHHHHHHHCC-------CEEEEEecCCcccccchhhhh-hhc--cCCCeeEEeCccc--------
Confidence 4689999999999999999999987 78999999865 211110 000 1134555555654
Q ss_pred HhccCeeEeccCCCCC---------------CcHHHHHHHHHcCC-cEEecCCc
Q 014694 86 CSQTKLLLNCVGPYRL---------------HGDPVAAACVHSGC-DYLDISGE 123 (420)
Q Consensus 86 ~~~~dvVIn~aGp~~~---------------~~~~vv~Ac~~~g~-~yvdisge 123 (420)
++|+|||++|.... ...+++++|.++++ ++|.+|..
T Consensus 69 --~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~v~~~v~~SS~ 120 (321)
T 3vps_A 69 --DVRLVYHLASHKSVPRSFKQPLDYLDNVDSGRHLLALCTSVGVPKVVVGSTC 120 (321)
T ss_dssp --TEEEEEECCCCCCHHHHTTSTTTTHHHHHHHHHHHHHHHHHTCCEEEEEEEG
T ss_pred --cCCEEEECCccCChHHHHhCHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCH
Confidence 79999999996531 01678999999996 67777653
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.58 E-value=3.2e-08 Score=91.91 Aligned_cols=71 Identities=13% Similarity=0.054 Sum_probs=60.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|+||+.++++|++++ ++|++.+|+.++++ ....++.+|++|+++++++++
T Consensus 4 k~vlITGas~gIG~~~a~~l~~~G-------~~V~~~~r~~~~~~-----------~~~~~~~~D~~~~~~~~~~~~~~~ 65 (236)
T 1ooe_A 4 GKVIVYGGKGALGSAILEFFKKNG-------YTVLNIDLSANDQA-----------DSNILVDGNKNWTEQEQSILEQTA 65 (236)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTT-------EEEEEEESSCCTTS-----------SEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEecCccccc-----------cccEEEeCCCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 89999999876642 123567789999999988876
Q ss_pred ------ccCeeEeccCCC
Q 014694 88 ------QTKLLLNCVGPY 99 (420)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (420)
+.|+|||+||..
T Consensus 66 ~~~~~g~id~lv~~Ag~~ 83 (236)
T 1ooe_A 66 SSLQGSQVDGVFCVAGGW 83 (236)
T ss_dssp HHHTTCCEEEEEECCCCC
T ss_pred HHhCCCCCCEEEECCccc
Confidence 689999999964
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=98.58 E-value=2.3e-08 Score=94.47 Aligned_cols=84 Identities=12% Similarity=0.090 Sum_probs=65.1
Q ss_pred cceEEEEcCC--cHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHH-HHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 014694 10 LFDVIILGAS--GFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRV-KQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 10 ~~~IvV~GAT--G~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl-~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
...++|+||+ +++|+.++++|++++ .+|++.+|+.++. ++.++++......++.++.+|++|++++++++
T Consensus 20 ~k~vlITGas~~~giG~~~a~~l~~~G-------~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~ 92 (267)
T 3gdg_A 20 GKVVVVTGASGPKGMGIEAARGCAEMG-------AAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLV 92 (267)
T ss_dssp TCEEEETTCCSSSSHHHHHHHHHHHTS-------CEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHH
T ss_pred CCEEEEECCCCCCChHHHHHHHHHHCC-------CeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHH
Confidence 3479999999 899999999999998 7899998875443 34443331101246788899999999999988
Q ss_pred hc-------cCeeEeccCCCC
Q 014694 87 SQ-------TKLLLNCVGPYR 100 (420)
Q Consensus 87 ~~-------~dvVIn~aGp~~ 100 (420)
+. .|+|||+||...
T Consensus 93 ~~~~~~~g~id~li~nAg~~~ 113 (267)
T 3gdg_A 93 KDVVADFGQIDAFIANAGATA 113 (267)
T ss_dssp HHHHHHTSCCSEEEECCCCCC
T ss_pred HHHHHHcCCCCEEEECCCcCC
Confidence 74 599999999654
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.57 E-value=3.2e-07 Score=86.07 Aligned_cols=72 Identities=19% Similarity=0.167 Sum_probs=55.6
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
+...|+|+||+|+||+.++++|++++ .+|++.+|+.+.++ +++ .+.++ +|+ .++++++++
T Consensus 18 ~~k~vlVTGas~gIG~~~a~~l~~~G-------~~V~~~~r~~~~~~----~~~-----~~~~~-~D~--~~~~~~~~~~ 78 (249)
T 1o5i_A 18 RDKGVLVLAASRGIGRAVADVLSQEG-------AEVTICARNEELLK----RSG-----HRYVV-CDL--RKDLDLLFEK 78 (249)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTT-------CEEEEEESCHHHHH----HTC-----SEEEE-CCT--TTCHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEcCCHHHHH----hhC-----CeEEE-eeH--HHHHHHHHHH
Confidence 34479999999999999999999998 79999999985543 221 34556 898 344555544
Q ss_pred --ccCeeEeccCCC
Q 014694 88 --QTKLLLNCVGPY 99 (420)
Q Consensus 88 --~~dvVIn~aGp~ 99 (420)
+.|+|||+||..
T Consensus 79 ~~~iD~lv~~Ag~~ 92 (249)
T 1o5i_A 79 VKEVDILVLNAGGP 92 (249)
T ss_dssp SCCCSEEEECCCCC
T ss_pred hcCCCEEEECCCCC
Confidence 789999999964
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=98.56 E-value=1.6e-07 Score=97.69 Aligned_cols=83 Identities=17% Similarity=0.189 Sum_probs=67.9
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcc-eEEEEecChh---HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIK-SLALAGRNPT---RVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~-~v~iagRs~~---kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~ 85 (420)
...|+|+||+|+||+.++++|++++ . ++++.+|+.. +++++.+++.. ...++.++.+|++|.+++.++
T Consensus 259 ~~~vLITGgtGgIG~~lA~~La~~G-------~~~vvl~~R~~~~~~~~~~l~~~l~~-~g~~v~~~~~Dvtd~~~v~~~ 330 (511)
T 2z5l_A 259 SGTVLITGGMGAIGRRLARRLAAEG-------AERLVLTSRRGPEAPGAAELAEELRG-HGCEVVHAACDVAERDALAAL 330 (511)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTT-------CSEEEEEESSGGGSTTHHHHHHHHHT-TTCEEEEEECCSSCHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC-------CcEEEEEecCCcccHHHHHHHHHHHh-cCCEEEEEEeCCCCHHHHHHH
Confidence 3579999999999999999999987 4 6899999863 45555555531 234678899999999999999
Q ss_pred Hhc--cCeeEeccCCCC
Q 014694 86 CSQ--TKLLLNCVGPYR 100 (420)
Q Consensus 86 ~~~--~dvVIn~aGp~~ 100 (420)
+++ .|+|||++|...
T Consensus 331 ~~~~~ld~VVh~AGv~~ 347 (511)
T 2z5l_A 331 VTAYPPNAVFHTAGILD 347 (511)
T ss_dssp HHHSCCSEEEECCCCCC
T ss_pred HhcCCCcEEEECCcccC
Confidence 986 999999999654
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=98.55 E-value=4.3e-08 Score=101.98 Aligned_cols=89 Identities=16% Similarity=0.175 Sum_probs=67.4
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
.|+|+|+|||||+|++++++|++.+ ++|.+++|+.++. ..+.+|+.|. +.+.+.++
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G-------~~V~~l~R~~~~~---------------~~v~~d~~~~--~~~~l~~~ 202 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGG-------HEVIQLVRKEPKP---------------GKRFWDPLNP--ASDLLDGA 202 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT-------CEEEEEESSSCCT---------------TCEECCTTSC--CTTTTTTC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEECCCCCc---------------cceeecccch--hHHhcCCC
Confidence 6799999999999999999999987 8999999987653 2256677643 45667899
Q ss_pred CeeEeccCCCCCC-----------------cHHHHHH-HHHcCC-cEEecCC
Q 014694 90 KLLLNCVGPYRLH-----------------GDPVAAA-CVHSGC-DYLDISG 122 (420)
Q Consensus 90 dvVIn~aGp~~~~-----------------~~~vv~A-c~~~g~-~yvdisg 122 (420)
|+||||||+.... ..+++++ |.+.++ ++|.+|+
T Consensus 203 D~Vih~A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS 254 (516)
T 3oh8_A 203 DVLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASA 254 (516)
T ss_dssp SEEEECCCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEE
T ss_pred CEEEECCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCc
Confidence 9999999975210 2678888 566666 6777765
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=98.53 E-value=1.2e-07 Score=88.80 Aligned_cols=70 Identities=17% Similarity=0.188 Sum_probs=59.4
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|+||+.++++|++++ .+|++.+|+.++++ .+..+.+|++|+++++++++
T Consensus 16 k~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~------------~~~~~~~D~~~~~~~~~~~~~~~ 76 (247)
T 1uzm_A 16 RSVLVTGGNRGIGLAIAQRLAADG-------HKVAVTHRGSGAPK------------GLFGVEVDVTDSDAVDRAFTAVE 76 (247)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT-------CEEEEEESSSCCCT------------TSEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEeCChHHHH------------HhcCeeccCCCHHHHHHHHHHHH
Confidence 469999999999999999999998 79999999876542 12247899999999998876
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
+.|+|||+||..
T Consensus 77 ~~~g~id~lv~~Ag~~ 92 (247)
T 1uzm_A 77 EHQGPVEVLVSNAGLS 92 (247)
T ss_dssp HHHSSCSEEEEECSCC
T ss_pred HHcCCCCEEEECCCCC
Confidence 469999999964
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=98.53 E-value=2.2e-07 Score=90.79 Aligned_cols=88 Identities=14% Similarity=0.116 Sum_probs=65.3
Q ss_pred CCCCCCCCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEE---------ecChhHHHHHHHHhCCCCCCCccE
Q 014694 1 MQAQSQIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA---------GRNPTRVKQALQWASPSHSLSIPI 71 (420)
Q Consensus 1 m~~~~~~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~ia---------gRs~~kl~~~~~~l~~~~~~~~~~ 71 (420)
|..++... ...++|+||+|+||+.++++|++++ .+|++. +|+.++++++.+++.. ....
T Consensus 1 M~~~~~l~-gk~~lVTGas~GIG~~~a~~La~~G-------a~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~----~~~~ 68 (319)
T 1gz6_A 1 MASPLRFD-GRVVLVTGAGGGLGRAYALAFAERG-------ALVVVNDLGGDFKGVGKGSSAADKVVEEIRR----RGGK 68 (319)
T ss_dssp --CCCCCT-TCEEEETTTTSHHHHHHHHHHHHTT-------CEEEEECCCBCTTSCBCCSHHHHHHHHHHHH----TTCE
T ss_pred CCCCCCCC-CCEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEcCCcccccccCCHHHHHHHHHHHHh----hCCe
Confidence 55444333 3479999999999999999999998 788885 5677888777776631 1123
Q ss_pred EEEeCCCHHHHHHHHh-------ccCeeEeccCCCC
Q 014694 72 LTADTTDPPSLHRLCS-------QTKLLLNCVGPYR 100 (420)
Q Consensus 72 i~~D~~d~~sl~~~~~-------~~dvVIn~aGp~~ 100 (420)
..+|+.|.++++++++ +.|+|||+||...
T Consensus 69 ~~~D~~~~~~~~~~~~~~~~~~g~iD~lVnnAG~~~ 104 (319)
T 1gz6_A 69 AVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILR 104 (319)
T ss_dssp EEEECCCGGGHHHHHHHHHHHTSCCCEEEECCCCCC
T ss_pred EEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 4689999988877754 5899999999643
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.50 E-value=1.4e-07 Score=88.06 Aligned_cols=72 Identities=15% Similarity=0.119 Sum_probs=60.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHH-hCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALK-LFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~-~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..++|+||+|+||+.++++|++ .+ .+|++.+|+.+.. ...+.++.+|++|+++++++++
T Consensus 5 k~vlITGas~gIG~~~a~~l~~~~g-------~~v~~~~~~~~~~-----------~~~~~~~~~Dv~~~~~v~~~~~~~ 66 (244)
T 4e4y_A 5 ANYLVTGGSKGIGKAVVELLLQNKN-------HTVINIDIQQSFS-----------AENLKFIKADLTKQQDITNVLDII 66 (244)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTSTT-------EEEEEEESSCCCC-----------CTTEEEEECCTTCHHHHHHHHHHT
T ss_pred CeEEEeCCCChHHHHHHHHHHhcCC-------cEEEEeccccccc-----------cccceEEecCcCCHHHHHHHHHHH
Confidence 4699999999999999999998 55 7899999876521 2356789999999999999987
Q ss_pred ---ccCeeEeccCCCC
Q 014694 88 ---QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ---~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 67 ~~~~id~lv~nAg~~~ 82 (244)
T 4e4y_A 67 KNVSFDGIFLNAGILI 82 (244)
T ss_dssp TTCCEEEEEECCCCCC
T ss_pred HhCCCCEEEECCccCC
Confidence 6799999999643
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=98.49 E-value=1.6e-07 Score=88.20 Aligned_cols=68 Identities=13% Similarity=0.141 Sum_probs=58.8
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc---
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ--- 88 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~--- 88 (420)
.|+|+||+|++|+.++++|++++ ++|++.+|+.++++ ...+.+|++|.++++++++.
T Consensus 24 ~vlITGas~gIG~~la~~l~~~G-------~~V~~~~r~~~~~~-------------~~~~~~d~~d~~~v~~~~~~~~~ 83 (251)
T 3orf_A 24 NILVLGGSGALGAEVVKFFKSKS-------WNTISIDFRENPNA-------------DHSFTIKDSGEEEIKSVIEKINS 83 (251)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESSCCTTS-------------SEEEECSCSSHHHHHHHHHHHHT
T ss_pred EEEEECCCCHHHHHHHHHHHHCC-------CEEEEEeCCccccc-------------ccceEEEeCCHHHHHHHHHHHHH
Confidence 69999999999999999999998 79999999976641 23578899999999998874
Q ss_pred ----cCeeEeccCCC
Q 014694 89 ----TKLLLNCVGPY 99 (420)
Q Consensus 89 ----~dvVIn~aGp~ 99 (420)
.|+|||+||..
T Consensus 84 ~~g~iD~li~~Ag~~ 98 (251)
T 3orf_A 84 KSIKVDTFVCAAGGW 98 (251)
T ss_dssp TTCCEEEEEECCCCC
T ss_pred HcCCCCEEEECCccC
Confidence 49999999964
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=98.49 E-value=3.1e-07 Score=87.27 Aligned_cols=71 Identities=20% Similarity=0.173 Sum_probs=59.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|+||+.++++|++++ .+|++++|+.++++ ....+.+|++|.++++++++
T Consensus 29 k~vlVTGas~gIG~aia~~la~~G-------~~V~~~~r~~~~~~------------~~~~~~~Dv~~~~~~~~~~~~~~ 89 (266)
T 3uxy_A 29 KVALVTGAAGGIGGAVVTALRAAG-------ARVAVADRAVAGIA------------ADLHLPGDLREAAYADGLPGAVA 89 (266)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTT-------CEEEECSSCCTTSC------------CSEECCCCTTSHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHH------------hhhccCcCCCCHHHHHHHHHHHH
Confidence 469999999999999999999998 79999999876542 12334789999999888776
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 90 ~~~g~iD~lvnnAg~~~ 106 (266)
T 3uxy_A 90 AGLGRLDIVVNNAGVIS 106 (266)
T ss_dssp HHHSCCCEEEECCCCCC
T ss_pred HhcCCCCEEEECCCCCC
Confidence 6899999999754
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=98.44 E-value=5.4e-07 Score=93.37 Aligned_cols=82 Identities=18% Similarity=0.208 Sum_probs=65.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh---hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP---TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~---~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
..++|+||+|+||+.++++|++++. .++++.+|+. ++++++.+++.. ...++.++.+|++|.+++.++++
T Consensus 240 ~~vLITGgsgGIG~alA~~La~~Ga------~~vvl~~R~~~~~~~~~~l~~~l~~-~g~~v~~~~~Dvtd~~~v~~~~~ 312 (496)
T 3mje_A 240 GSVLVTGGTGGIGGRVARRLAEQGA------AHLVLTSRRGADAPGAAELRAELEQ-LGVRVTIAACDAADREALAALLA 312 (496)
T ss_dssp SEEEEETCSSHHHHHHHHHHHHTTC------SEEEEEESSGGGSTTHHHHHHHHHH-TTCEEEEEECCTTCHHHHHHHHH
T ss_pred CEEEEECCCCchHHHHHHHHHHCCC------cEEEEEeCCCCChHHHHHHHHHHHh-cCCeEEEEEccCCCHHHHHHHHH
Confidence 4799999999999999999999882 3789999973 344555554421 23467889999999999999987
Q ss_pred c------cCeeEeccCCC
Q 014694 88 Q------TKLLLNCVGPY 99 (420)
Q Consensus 88 ~------~dvVIn~aGp~ 99 (420)
. .|+|||+||..
T Consensus 313 ~i~~~g~ld~vVh~AGv~ 330 (496)
T 3mje_A 313 ELPEDAPLTAVFHSAGVA 330 (496)
T ss_dssp TCCTTSCEEEEEECCCCC
T ss_pred HHHHhCCCeEEEECCccc
Confidence 4 68999999975
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=98.43 E-value=1.4e-07 Score=92.45 Aligned_cols=82 Identities=16% Similarity=0.008 Sum_probs=61.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh---HHHHHHHHhC--CCCCCCccEEEEeCCCHHHHHHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT---RVKQALQWAS--PSHSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~---kl~~~~~~l~--~~~~~~~~~i~~D~~d~~sl~~~ 85 (420)
..|+||||+|+||+.++++|++++ .++++++|+.. ++.+..+.+. .....++.++.+|++|+++++++
T Consensus 3 k~vlVTGas~GIG~ala~~L~~~G-------~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~ 75 (327)
T 1jtv_A 3 TVVLITGCSSGIGLHLAVRLASDP-------SQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAA 75 (327)
T ss_dssp EEEEESCCSSHHHHHHHHHHHTCT-------TCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-------CceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHH
Confidence 369999999999999999999988 56666666543 3333333221 00124678899999999999999
Q ss_pred Hhc-----cCeeEeccCCC
Q 014694 86 CSQ-----TKLLLNCVGPY 99 (420)
Q Consensus 86 ~~~-----~dvVIn~aGp~ 99 (420)
++. .|+|||+||..
T Consensus 76 ~~~~~~g~iD~lVnnAG~~ 94 (327)
T 1jtv_A 76 RERVTEGRVDVLVCNAGLG 94 (327)
T ss_dssp HHTCTTSCCSEEEECCCCC
T ss_pred HHHHhcCCCCEEEECCCcC
Confidence 986 89999999964
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=98.42 E-value=3.7e-07 Score=86.04 Aligned_cols=79 Identities=16% Similarity=0.140 Sum_probs=63.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh-HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT-RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~-kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..++||||++.||+.+++.|+++| .+|++.+|+.. +..+.+++. ..++..+.+|++|+++++++++
T Consensus 10 KvalVTGas~GIG~aiA~~la~~G-------a~Vvi~~r~~~~~~~~~~~~~----g~~~~~~~~Dv~d~~~v~~~~~~g 78 (247)
T 4hp8_A 10 RKALVTGANTGLGQAIAVGLAAAG-------AEVVCAARRAPDETLDIIAKD----GGNASALLIDFADPLAAKDSFTDA 78 (247)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT-------CEEEEEESSCCHHHHHHHHHT----TCCEEEEECCTTSTTTTTTSSTTT
T ss_pred CEEEEeCcCCHHHHHHHHHHHHcC-------CEEEEEeCCcHHHHHHHHHHh----CCcEEEEEccCCCHHHHHHHHHhC
Confidence 369999999999999999999998 89999999853 222233332 3567889999999999888876
Q ss_pred ccCeeEeccCCCC
Q 014694 88 QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ~~dvVIn~aGp~~ 100 (420)
+.|++||+||...
T Consensus 79 ~iDiLVNNAGi~~ 91 (247)
T 4hp8_A 79 GFDILVNNAGIIR 91 (247)
T ss_dssp CCCEEEECCCCCC
T ss_pred CCCEEEECCCCCC
Confidence 5899999999654
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=98.42 E-value=7.4e-07 Score=75.36 Aligned_cols=101 Identities=12% Similarity=0.097 Sum_probs=74.4
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-HhccC
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CSQTK 90 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~-~~~~d 90 (420)
+|+|+|+ |.+|+.+++.|.+.+ .+|.+.+|++++++.+.+ .....+.+|..|.+.+.++ +.++|
T Consensus 8 ~v~I~G~-G~iG~~~a~~l~~~g-------~~v~~~d~~~~~~~~~~~-------~~~~~~~~d~~~~~~l~~~~~~~~d 72 (144)
T 2hmt_A 8 QFAVIGL-GRFGGSIVKELHRMG-------HEVLAVDINEEKVNAYAS-------YATHAVIANATEENELLSLGIRNFE 72 (144)
T ss_dssp SEEEECC-SHHHHHHHHHHHHTT-------CCCEEEESCHHHHHTTTT-------TCSEEEECCTTCHHHHHTTTGGGCS
T ss_pred cEEEECC-CHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHH-------hCCEEEEeCCCCHHHHHhcCCCCCC
Confidence 6999998 999999999999987 688899999877643321 2345678899998888876 78999
Q ss_pred eeEeccCCCCCCcHHHHHHHHHcCCcEEe-cCCcHHHH
Q 014694 91 LLLNCVGPYRLHGDPVAAACVHSGCDYLD-ISGEPEFM 127 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~Ac~~~g~~yvd-isge~~~~ 127 (420)
+||++++........+.+.|.+.+.+.+. .+......
T Consensus 73 ~vi~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~ 110 (144)
T 2hmt_A 73 YVIVAIGANIQASTLTTLLLKELDIPNIWVKAQNYYHH 110 (144)
T ss_dssp EEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCSHHHH
T ss_pred EEEECCCCchHHHHHHHHHHHHcCCCeEEEEeCCHHHH
Confidence 99999986322234567778888875443 34444433
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=98.41 E-value=7.6e-07 Score=84.66 Aligned_cols=72 Identities=14% Similarity=0.055 Sum_probs=60.4
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
...++||||++.||+.+++.|+++| .+|++.+|+.++. ..+...+.+|++|+++++++++
T Consensus 11 GK~alVTGas~GIG~aia~~la~~G-------a~V~~~~r~~~~~-----------~~~~~~~~~Dv~~~~~v~~~~~~~ 72 (261)
T 4h15_A 11 GKRALITAGTKGAGAATVSLFLELG-------AQVLTTARARPEG-----------LPEELFVEADLTTKEGCAIVAEAT 72 (261)
T ss_dssp TCEEEESCCSSHHHHHHHHHHHHTT-------CEEEEEESSCCTT-----------SCTTTEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEeccCcHHHHHHHHHHHHcC-------CEEEEEECCchhC-----------CCcEEEEEcCCCCHHHHHHHHHHH
Confidence 3479999999999999999999998 8999999986431 1234578999999999998876
Q ss_pred -----ccCeeEeccCCC
Q 014694 88 -----QTKLLLNCVGPY 99 (420)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (420)
+.|++||+||..
T Consensus 73 ~~~~G~iDilVnnAG~~ 89 (261)
T 4h15_A 73 RQRLGGVDVIVHMLGGS 89 (261)
T ss_dssp HHHTSSCSEEEECCCCC
T ss_pred HHHcCCCCEEEECCCCC
Confidence 479999999954
|
| >2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=98.41 E-value=3.5e-07 Score=93.33 Aligned_cols=105 Identities=16% Similarity=0.239 Sum_probs=74.6
Q ss_pred CCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCC--CH-HHHH
Q 014694 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTT--DP-PSLH 83 (420)
Q Consensus 7 ~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~--d~-~sl~ 83 (420)
..-+++|+|+| .|.+|+.+++.|+++..-. ...|.+++.+..+. .+.+.++ +.++..+++ |. +.+.
T Consensus 10 ~~~~~rVlIIG-aGgVG~~va~lla~~~dv~---~~~I~vaD~~~~~~-~~~~~~g------~~~~~~~Vdadnv~~~l~ 78 (480)
T 2ph5_A 10 ILFKNRFVILG-FGCVGQALMPLIFEKFDIK---PSQVTIIAAEGTKV-DVAQQYG------VSFKLQQITPQNYLEVIG 78 (480)
T ss_dssp BCCCSCEEEEC-CSHHHHHHHHHHHHHBCCC---GGGEEEEESSCCSC-CHHHHHT------CEEEECCCCTTTHHHHTG
T ss_pred ecCCCCEEEEC-cCHHHHHHHHHHHhCCCCc---eeEEEEeccchhhh-hHHhhcC------CceeEEeccchhHHHHHH
Confidence 34456899999 5999999999999986200 12788998876543 3344432 355555554 44 3355
Q ss_pred HHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcH
Q 014694 84 RLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEP 124 (420)
Q Consensus 84 ~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~ 124 (420)
+++++.|+|||++=++ ....++++|.++|+||+|++.|+
T Consensus 79 aLl~~~DvVIN~s~~~--~~l~Im~acleaGv~YlDTa~E~ 117 (480)
T 2ph5_A 79 STLEENDFLIDVSIGI--SSLALIILCNQKGALYINAATEP 117 (480)
T ss_dssp GGCCTTCEEEECCSSS--CHHHHHHHHHHHTCEEEESSCCC
T ss_pred HHhcCCCEEEECCccc--cCHHHHHHHHHcCCCEEECCCCc
Confidence 6777779999966443 35899999999999999999764
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.41 E-value=2.4e-06 Score=71.92 Aligned_cols=104 Identities=14% Similarity=0.125 Sum_probs=75.1
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-Hhc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CSQ 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~-~~~ 88 (420)
.|+|+|+|+ |++|+.+++.|.+.+ .+|.+.+|++++++.+.+.. ++.++.+|..+++.+.+. +.+
T Consensus 4 ~m~i~IiG~-G~iG~~~a~~L~~~g-------~~v~~~d~~~~~~~~~~~~~------~~~~~~~d~~~~~~l~~~~~~~ 69 (140)
T 1lss_A 4 GMYIIIAGI-GRVGYTLAKSLSEKG-------HDIVLIDIDKDICKKASAEI------DALVINGDCTKIKTLEDAGIED 69 (140)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHC------SSEEEESCTTSHHHHHHTTTTT
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCC-------CeEEEEECCHHHHHHHHHhc------CcEEEEcCCCCHHHHHHcCccc
Confidence 478999987 999999999999987 78999999998887665543 345677899888887765 678
Q ss_pred cCeeEeccCCCCCCcHHHHHHHHHcCC-cEEecCCcHHHHH
Q 014694 89 TKLLLNCVGPYRLHGDPVAAACVHSGC-DYLDISGEPEFME 128 (420)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~Ac~~~g~-~yvdisge~~~~~ 128 (420)
+|+||.+++... ....+.+.+.+.+. +.+..+..+...+
T Consensus 70 ~d~vi~~~~~~~-~~~~~~~~~~~~~~~~ii~~~~~~~~~~ 109 (140)
T 1lss_A 70 ADMYIAVTGKEE-VNLMSSLLAKSYGINKTIARISEIEYKD 109 (140)
T ss_dssp CSEEEECCSCHH-HHHHHHHHHHHTTCCCEEEECSSTTHHH
T ss_pred CCEEEEeeCCch-HHHHHHHHHHHcCCCEEEEEecCHhHHH
Confidence 999999987532 22345566666665 3444443333333
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=98.40 E-value=1e-07 Score=89.28 Aligned_cols=68 Identities=12% Similarity=0.068 Sum_probs=58.0
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc--
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT-- 89 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~-- 89 (420)
.|+|+||+|+||+.++++|++++ ++|++++|+.++++. . +.+|++|.+++++++++.
T Consensus 3 ~vlVTGas~gIG~~~a~~l~~~G-------~~V~~~~r~~~~~~~-------------~-~~~Dl~~~~~v~~~~~~~~~ 61 (257)
T 1fjh_A 3 IIVISGCATGIGAATRKVLEAAG-------HQIVGIDIRDAEVIA-------------D-LSTAEGRKQAIADVLAKCSK 61 (257)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESSSSSEEC-------------C-TTSHHHHHHHHHHHHTTCTT
T ss_pred EEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEeCCchhhcc-------------c-cccCCCCHHHHHHHHHHhCC
Confidence 59999999999999999999998 799999998765420 1 458999999999998755
Q ss_pred --CeeEeccCCCC
Q 014694 90 --KLLLNCVGPYR 100 (420)
Q Consensus 90 --dvVIn~aGp~~ 100 (420)
|+|||+||...
T Consensus 62 ~id~lv~~Ag~~~ 74 (257)
T 1fjh_A 62 GMDGLVLCAGLGP 74 (257)
T ss_dssp CCSEEEECCCCCT
T ss_pred CCCEEEECCCCCC
Confidence 99999999754
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=98.39 E-value=3e-07 Score=85.84 Aligned_cols=76 Identities=16% Similarity=0.182 Sum_probs=56.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHH---HH-
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHR---LC- 86 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~---~~- 86 (420)
..++|+||+|+||+.+++.|++ + .+|++.+|+.++++++.+ + .++.++.+|+.|.++... .+
T Consensus 6 k~vlITGas~gIG~~~a~~l~~-g-------~~v~~~~r~~~~~~~~~~-~-----~~~~~~~~D~~~~~~~~~~~~~~~ 71 (245)
T 3e9n_A 6 KIAVVTGATGGMGIEIVKDLSR-D-------HIVYALGRNPEHLAALAE-I-----EGVEPIESDIVKEVLEEGGVDKLK 71 (245)
T ss_dssp CEEEEESTTSHHHHHHHHHHTT-T-------SEEEEEESCHHHHHHHHT-S-----TTEEEEECCHHHHHHTSSSCGGGT
T ss_pred CEEEEEcCCCHHHHHHHHHHhC-C-------CeEEEEeCCHHHHHHHHh-h-----cCCcceecccchHHHHHHHHHHHH
Confidence 4699999999999999999987 5 689999999998876654 2 357788899887754221 12
Q ss_pred --hccCeeEeccCCCC
Q 014694 87 --SQTKLLLNCVGPYR 100 (420)
Q Consensus 87 --~~~dvVIn~aGp~~ 100 (420)
.+.|+|||+||...
T Consensus 72 ~~~~id~lv~~Ag~~~ 87 (245)
T 3e9n_A 72 NLDHVDTLVHAAAVAR 87 (245)
T ss_dssp TCSCCSEEEECC----
T ss_pred hcCCCCEEEECCCcCC
Confidence 26899999999653
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=98.38 E-value=2.4e-06 Score=87.59 Aligned_cols=77 Identities=16% Similarity=0.154 Sum_probs=63.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh--hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~--~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
..++|+||+|+||+.++++|++++ .+|++.+|+. +.++++.+++ +..++.+|++|.++++++++
T Consensus 214 k~~LVTGgsgGIG~aiA~~La~~G-------a~Vvl~~r~~~~~~l~~~~~~~------~~~~~~~Dvtd~~~v~~~~~~ 280 (454)
T 3u0b_A 214 KVAVVTGAARGIGATIAEVFARDG-------ATVVAIDVDGAAEDLKRVADKV------GGTALTLDVTADDAVDKITAH 280 (454)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTT-------CEEEEEECGGGHHHHHHHHHHH------TCEEEECCTTSTTHHHHHHHH
T ss_pred CEEEEeCCchHHHHHHHHHHHHCC-------CEEEEEeCCccHHHHHHHHHHc------CCeEEEEecCCHHHHHHHHHH
Confidence 479999999999999999999998 7899999964 3455555554 35689999999999998876
Q ss_pred -------ccCeeEeccCCCC
Q 014694 88 -------QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -------~~dvVIn~aGp~~ 100 (420)
..|+|||+||...
T Consensus 281 ~~~~~g~~id~lV~nAGv~~ 300 (454)
T 3u0b_A 281 VTEHHGGKVDILVNNAGITR 300 (454)
T ss_dssp HHHHSTTCCSEEEECCCCCC
T ss_pred HHHHcCCCceEEEECCcccC
Confidence 3899999999754
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.35 E-value=1.7e-06 Score=73.60 Aligned_cols=89 Identities=16% Similarity=0.119 Sum_probs=69.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-Hhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~-~~~~ 89 (420)
.+|+|+|+ |++|+.+++.|.+.+ ++|.+.+|++++++.+.+ ....++.+|.+|++.++++ +.++
T Consensus 7 ~~v~I~G~-G~iG~~la~~L~~~g-------~~V~~id~~~~~~~~~~~-------~~~~~~~gd~~~~~~l~~~~~~~~ 71 (141)
T 3llv_A 7 YEYIVIGS-EAAGVGLVRELTAAG-------KKVLAVDKSKEKIELLED-------EGFDAVIADPTDESFYRSLDLEGV 71 (141)
T ss_dssp CSEEEECC-SHHHHHHHHHHHHTT-------CCEEEEESCHHHHHHHHH-------TTCEEEECCTTCHHHHHHSCCTTC
T ss_pred CEEEEECC-CHHHHHHHHHHHHCC-------CeEEEEECCHHHHHHHHH-------CCCcEEECCCCCHHHHHhCCcccC
Confidence 47999998 999999999999987 789999999999877654 2357889999999998886 5689
Q ss_pred CeeEeccCCCCCCcHHHHHHHHHcCC
Q 014694 90 KLLLNCVGPYRLHGDPVAAACVHSGC 115 (420)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~Ac~~~g~ 115 (420)
|+||.+.+.. .....+...+.+.+.
T Consensus 72 d~vi~~~~~~-~~n~~~~~~a~~~~~ 96 (141)
T 3llv_A 72 SAVLITGSDD-EFNLKILKALRSVSD 96 (141)
T ss_dssp SEEEECCSCH-HHHHHHHHHHHHHCC
T ss_pred CEEEEecCCH-HHHHHHHHHHHHhCC
Confidence 9999998732 112445566666664
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=98.35 E-value=3.9e-07 Score=95.15 Aligned_cols=84 Identities=15% Similarity=0.073 Sum_probs=64.6
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEE-ecC-------------hhHHHHHHHHhCCCCCCCccEEEEe
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA-GRN-------------PTRVKQALQWASPSHSLSIPILTAD 75 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~ia-gRs-------------~~kl~~~~~~l~~~~~~~~~~i~~D 75 (420)
...++|+||+|+||..++++|++++. ..+++. +|+ .++++++.+++.. ...++.++.+|
T Consensus 251 ~~~vLITGgsgGIG~~lA~~La~~G~------~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~v~~~~~D 323 (525)
T 3qp9_A 251 DGTVLVTGAEEPAAAEAARRLARDGA------GHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELAD-LGATATVVTCD 323 (525)
T ss_dssp TSEEEESSTTSHHHHHHHHHHHHHTC------CEEEEEECCCC---------------CHHHHHHHHH-HTCEEEEEECC
T ss_pred CCEEEEECCCCcHHHHHHHHHHHcCC------CEEEEEeCCCCCCccccccccccCHHHHHHHHHHHh-cCCEEEEEECC
Confidence 34799999999999999999999982 347777 898 3445555555421 13467889999
Q ss_pred CCCHHHHHHHHhc------cCeeEeccCCCC
Q 014694 76 TTDPPSLHRLCSQ------TKLLLNCVGPYR 100 (420)
Q Consensus 76 ~~d~~sl~~~~~~------~dvVIn~aGp~~ 100 (420)
++|.+++.++++. .|+|||+||...
T Consensus 324 vtd~~~v~~~~~~i~~~g~id~vVh~AGv~~ 354 (525)
T 3qp9_A 324 LTDAEAAARLLAGVSDAHPLSAVLHLPPTVD 354 (525)
T ss_dssp TTSHHHHHHHHHTSCTTSCEEEEEECCCCCC
T ss_pred CCCHHHHHHHHHHHHhcCCCcEEEECCcCCC
Confidence 9999999999986 589999999754
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=98.35 E-value=4.5e-07 Score=83.43 Aligned_cols=62 Identities=18% Similarity=0.224 Sum_probs=54.9
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
...++|+||+|+||+.++++|++++ .+|++.+|+.+ +|++|+++++++++
T Consensus 6 ~k~vlVTGas~gIG~~~a~~l~~~G-------~~V~~~~r~~~---------------------~D~~~~~~v~~~~~~~ 57 (223)
T 3uce_A 6 KTVYVVLGGTSGIGAELAKQLESEH-------TIVHVASRQTG---------------------LDISDEKSVYHYFETI 57 (223)
T ss_dssp CEEEEEETTTSHHHHHHHHHHCSTT-------EEEEEESGGGT---------------------CCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-------CEEEEecCCcc---------------------cCCCCHHHHHHHHHHh
Confidence 3479999999999999999999988 89999998753 69999999999887
Q ss_pred -ccCeeEeccCCC
Q 014694 88 -QTKLLLNCVGPY 99 (420)
Q Consensus 88 -~~dvVIn~aGp~ 99 (420)
+.|+|||+||..
T Consensus 58 g~id~lv~nAg~~ 70 (223)
T 3uce_A 58 GAFDHLIVTAGSY 70 (223)
T ss_dssp CSEEEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 679999999965
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=98.34 E-value=1.8e-06 Score=84.74 Aligned_cols=121 Identities=12% Similarity=0.003 Sum_probs=82.2
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC----hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHH
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN----PTRVKQALQWASPSHSLSIPILTADTTDPPSLHR 84 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs----~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~ 84 (420)
++++|+|+||+||+|+.++..|+..+..+.....++.+.+++ .++++....++.. ....+ ..|+....++.+
T Consensus 4 ~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~---~~~~~-~~~i~~~~~~~~ 79 (329)
T 1b8p_A 4 TPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDD---CAFPL-LAGMTAHADPMT 79 (329)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHT---TTCTT-EEEEEEESSHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhh---hcccc-cCcEEEecCcHH
Confidence 457999999999999999999988651000001378999998 7667655555531 11122 245555566888
Q ss_pred HHhccCeeEeccCCCCCCc--------------HHHHHHHHHcC-C--cEEecCCcHHHHHHHHHh
Q 014694 85 LCSQTKLLLNCVGPYRLHG--------------DPVAAACVHSG-C--DYLDISGEPEFMERMEAR 133 (420)
Q Consensus 85 ~~~~~dvVIn~aGp~~~~~--------------~~vv~Ac~~~g-~--~yvdisge~~~~~~~~~~ 133 (420)
.++++|+|||++|.....+ ..++++|.+.+ . .+|.+|.....+-.+..+
T Consensus 80 al~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~t~~~~~ 145 (329)
T 1b8p_A 80 AFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNAYIAMK 145 (329)
T ss_dssp HTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHH
T ss_pred HhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHHHHHHHH
Confidence 9999999999999655433 56788888874 3 577787656665555543
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=98.24 E-value=5.2e-07 Score=84.77 Aligned_cols=74 Identities=9% Similarity=-0.024 Sum_probs=53.9
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh----
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~---- 87 (420)
.++|+||+|+||+.++++|++++ ++|++.+|+.++++.+.+ +.. ...++..+ |. ++++++++
T Consensus 3 ~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~-l~~-~~~~~~~~--d~---~~v~~~~~~~~~ 68 (254)
T 1zmt_A 3 TAIVTNVKHFGGMGSALRLSEAG-------HTVACHDESFKQKDELEA-FAE-TYPQLKPM--SE---QEPAELIEAVTS 68 (254)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTT-------CEEEECCGGGGSHHHHHH-HHH-HCTTSEEC--CC---CSHHHHHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHH-HHh-cCCcEEEE--CH---HHHHHHHHHHHH
Confidence 59999999999999999999998 799999999888766544 311 01222222 44 44444443
Q ss_pred ---ccCeeEeccCCC
Q 014694 88 ---QTKLLLNCVGPY 99 (420)
Q Consensus 88 ---~~dvVIn~aGp~ 99 (420)
+.|+|||+||..
T Consensus 69 ~~g~iD~lv~nAg~~ 83 (254)
T 1zmt_A 69 AYGQVDVLVSNDIFA 83 (254)
T ss_dssp HHSCCCEEEEECCCC
T ss_pred HhCCCCEEEECCCcC
Confidence 689999999965
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=98.23 E-value=7.4e-07 Score=83.19 Aligned_cols=75 Identities=11% Similarity=0.004 Sum_probs=54.8
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEE-e--cChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHH-HHh
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA-G--RNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHR-LCS 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~ia-g--Rs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~-~~~ 87 (420)
.++|+||+|+||+.++++|++++ ++|++. + |+.++++++.+++. ..++. |..+.+.+.+ +.+
T Consensus 3 ~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~~~~r~~~~~~~~~~~~~-----~~~~~--~~~~v~~~~~~~~~ 68 (244)
T 1zmo_A 3 IALVTHARHFAGPAAVEALTQDG-------YTVVCHDASFADAAERQRFESENP-----GTIAL--AEQKPERLVDATLQ 68 (244)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTT-------CEEEECCGGGGSHHHHHHHHHHST-----TEEEC--CCCCGGGHHHHHGG
T ss_pred EEEEECCCChHHHHHHHHHHHCC-------CEEEEecCCcCCHHHHHHHHHHhC-----CCccc--CHHHHHHHHHHHHH
Confidence 69999999999999999999998 799999 6 99999888777651 11111 4433333322 222
Q ss_pred ---ccCeeEeccCCCC
Q 014694 88 ---QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ---~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 69 ~~g~iD~lv~~Ag~~~ 84 (244)
T 1zmo_A 69 HGEAIDTIVSNDYIPR 84 (244)
T ss_dssp GSSCEEEEEECCCCCT
T ss_pred HcCCCCEEEECCCcCC
Confidence 5799999999643
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.14 E-value=1.2e-05 Score=69.35 Aligned_cols=93 Identities=11% Similarity=0.070 Sum_probs=71.2
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC-hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-Hh
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CS 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs-~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~-~~ 87 (420)
+.+|+|+|+ |.+|+.+++.|.+.+ ++|.+++|+ .++.+.+.+... .++.++.+|.+|++.+.++ +.
T Consensus 3 ~~~vlI~G~-G~vG~~la~~L~~~g-------~~V~vid~~~~~~~~~~~~~~~----~~~~~i~gd~~~~~~l~~a~i~ 70 (153)
T 1id1_A 3 KDHFIVCGH-SILAINTILQLNQRG-------QNVTVISNLPEDDIKQLEQRLG----DNADVIPGDSNDSSVLKKAGID 70 (153)
T ss_dssp CSCEEEECC-SHHHHHHHHHHHHTT-------CCEEEEECCCHHHHHHHHHHHC----TTCEEEESCTTSHHHHHHHTTT
T ss_pred CCcEEEECC-CHHHHHHHHHHHHCC-------CCEEEEECCChHHHHHHHHhhc----CCCeEEEcCCCCHHHHHHcChh
Confidence 347999996 999999999999987 789999997 566655554442 3578899999999999987 89
Q ss_pred ccCeeEeccCCCCCCcHHHHHHHHHc-CC
Q 014694 88 QTKLLLNCVGPYRLHGDPVAAACVHS-GC 115 (420)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~Ac~~~-g~ 115 (420)
++|+||.+.+... ....+...|.+. +.
T Consensus 71 ~ad~vi~~~~~d~-~n~~~~~~a~~~~~~ 98 (153)
T 1id1_A 71 RCRAILALSDNDA-DNAFVVLSAKDMSSD 98 (153)
T ss_dssp TCSEEEECSSCHH-HHHHHHHHHHHHTSS
T ss_pred hCCEEEEecCChH-HHHHHHHHHHHHCCC
Confidence 9999999987532 224445566655 54
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=98.07 E-value=4.3e-06 Score=88.87 Aligned_cols=79 Identities=11% Similarity=0.015 Sum_probs=58.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEec---------ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR---------NPTRVKQALQWASPSHSLSIPILTADTTDPPS 81 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagR---------s~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~s 81 (420)
..++|+||+|+||+.+++.|++++ .+|++.+| +.++++++.+++.. ....+.+|+.|.++
T Consensus 20 k~~lVTGas~GIG~aiA~~La~~G-------a~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~----~~~~~~~D~~d~~~ 88 (613)
T 3oml_A 20 RVAVVTGAGAGLGREYALLFAERG-------AKVVVNDLGGTHSGDGASQRAADIVVDEIRK----AGGEAVADYNSVID 88 (613)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT-------CEEEEC--------------CHHHHHHHHHH----TTCCEEECCCCGGG
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEeCCcccccccCCHHHHHHHHHHHHH----hCCeEEEEeCCHHH
Confidence 469999999999999999999998 79999887 77777777776631 11234589999998
Q ss_pred HHHHHh-------ccCeeEeccCCCC
Q 014694 82 LHRLCS-------QTKLLLNCVGPYR 100 (420)
Q Consensus 82 l~~~~~-------~~dvVIn~aGp~~ 100 (420)
++++++ +.|+|||+||...
T Consensus 89 ~~~~~~~~~~~~g~iDiLVnnAGi~~ 114 (613)
T 3oml_A 89 GAKVIETAIKAFGRVDILVNNAGILR 114 (613)
T ss_dssp HHHHHC----------CEECCCCCCC
T ss_pred HHHHHHHHHHHCCCCcEEEECCCCCC
Confidence 888876 4799999999653
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=98.06 E-value=1.3e-05 Score=80.30 Aligned_cols=80 Identities=11% Similarity=-0.088 Sum_probs=62.7
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHH-hCCCCCCCcceEEEEecChhHH---------------HHHHHHhCCCCCCCccEE
Q 014694 9 ELFDVIILGASGFTGKYVVREALK-LFNFPSSPIKSLALAGRNPTRV---------------KQALQWASPSHSLSIPIL 72 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~-~~~~~~~~~~~v~iagRs~~kl---------------~~~~~~l~~~~~~~~~~i 72 (420)
....++|+||++.||+.+++.|++ .| .+|++.+|+.+.+ ++.+++. ..++..+
T Consensus 46 ~gKvaLVTGas~GIG~AiA~~LA~g~G-------A~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~----G~~a~~i 114 (405)
T 3zu3_A 46 GPKRVLVIGASTGYGLAARITAAFGCG-------ADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQK----GLYAKSI 114 (405)
T ss_dssp CCSEEEEESCSSHHHHHHHHHHHHHHC-------CEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHT----TCCEEEE
T ss_pred CCCEEEEeCcchHHHHHHHHHHHHhcC-------CEEEEEeCCchhhhhhcccccchhHHHHHHHHHhc----CCceEEE
Confidence 345799999999999999999999 98 7899998875432 2222222 2456778
Q ss_pred EEeCCCHHHHHHHHh-------ccCeeEeccCCC
Q 014694 73 TADTTDPPSLHRLCS-------QTKLLLNCVGPY 99 (420)
Q Consensus 73 ~~D~~d~~sl~~~~~-------~~dvVIn~aGp~ 99 (420)
.+|++|+++++++++ +.|++||+||..
T Consensus 115 ~~Dvtd~~~v~~~v~~i~~~~G~IDiLVNNAG~~ 148 (405)
T 3zu3_A 115 NGDAFSDEIKQLTIDAIKQDLGQVDQVIYSLASP 148 (405)
T ss_dssp ESCTTSHHHHHHHHHHHHHHTSCEEEEEECCCCS
T ss_pred ECCCCCHHHHHHHHHHHHHHcCCCCEEEEcCccc
Confidence 999999999998876 479999999853
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=98.04 E-value=1.6e-05 Score=72.84 Aligned_cols=103 Identities=17% Similarity=0.216 Sum_probs=75.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-Hhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~-~~~~ 89 (420)
|+|+|+|+ |.+|+.+++.|.+.+ ++|.+.++++++++.+.+.. +..++.+|.+|++.+.++ ++++
T Consensus 1 M~iiIiG~-G~~G~~la~~L~~~g-------~~v~vid~~~~~~~~l~~~~------~~~~i~gd~~~~~~l~~a~i~~a 66 (218)
T 3l4b_C 1 MKVIIIGG-ETTAYYLARSMLSRK-------YGVVIINKDRELCEEFAKKL------KATIIHGDGSHKEILRDAEVSKN 66 (218)
T ss_dssp CCEEEECC-HHHHHHHHHHHHHTT-------CCEEEEESCHHHHHHHHHHS------SSEEEESCTTSHHHHHHHTCCTT
T ss_pred CEEEEECC-CHHHHHHHHHHHhCC-------CeEEEEECCHHHHHHHHHHc------CCeEEEcCCCCHHHHHhcCcccC
Confidence 57999997 999999999999987 78999999999988776543 367899999999999987 7899
Q ss_pred CeeEeccCCCCCCcHHHHHHHHH-cCCc-EEecCCcHHHHH
Q 014694 90 KLLLNCVGPYRLHGDPVAAACVH-SGCD-YLDISGEPEFME 128 (420)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~Ac~~-~g~~-yvdisge~~~~~ 128 (420)
|+||.+.+... ....+...+.+ ++.. .+-........+
T Consensus 67 d~vi~~~~~d~-~n~~~~~~a~~~~~~~~iia~~~~~~~~~ 106 (218)
T 3l4b_C 67 DVVVILTPRDE-VNLFIAQLVMKDFGVKRVVSLVNDPGNME 106 (218)
T ss_dssp CEEEECCSCHH-HHHHHHHHHHHTSCCCEEEECCCSGGGHH
T ss_pred CEEEEecCCcH-HHHHHHHHHHHHcCCCeEEEEEeCcchHH
Confidence 99998886432 12333444444 4553 333333333333
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=98.03 E-value=9.1e-06 Score=88.85 Aligned_cols=84 Identities=15% Similarity=0.244 Sum_probs=67.3
Q ss_pred CcceEEEEcCCcHHHHHHHHHHH-HhCCCCCCCcc-eEEEEecC---hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHH
Q 014694 9 ELFDVIILGASGFTGKYVVREAL-KLFNFPSSPIK-SLALAGRN---PTRVKQALQWASPSHSLSIPILTADTTDPPSLH 83 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~-~~~~~~~~~~~-~v~iagRs---~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~ 83 (420)
....++|+||+|.+|+.++++|+ +++ . ++++.+|+ .++++++.+++.. ...++.++.||++|.++++
T Consensus 529 ~~~~~lItGg~~GlG~aiA~~la~~~G-------a~~vvl~~R~~~~~~~~~~~~~~l~~-~G~~v~~~~~Dvsd~~~v~ 600 (795)
T 3slk_A 529 AAGTVLVTGGTGALGAEVARHLVIERG-------VRNLVLVSRRGPAASGAAELVAQLTA-YGAEVSLQACDVADRETLA 600 (795)
T ss_dssp TTSEEEEETTTSHHHHHHHHHHHHTSS-------CCEEEEEESSGGGSTTHHHHHHHHHH-TTCEEEEEECCTTCHHHHH
T ss_pred cccceeeccCCCCcHHHHHHHHHHHcC-------CcEEEEeccCccchHHHHHHHHHHHh-cCCcEEEEEeecCCHHHHH
Confidence 34468999999999999999999 677 4 59999998 4556666666531 2356788999999999999
Q ss_pred HHHhc------cCeeEeccCCCC
Q 014694 84 RLCSQ------TKLLLNCVGPYR 100 (420)
Q Consensus 84 ~~~~~------~dvVIn~aGp~~ 100 (420)
++++. .|+|||+||...
T Consensus 601 ~~~~~~~~~~~id~lVnnAGv~~ 623 (795)
T 3slk_A 601 KVLASIPDEHPLTAVVHAAGVLD 623 (795)
T ss_dssp HHHHTSCTTSCEEEEEECCCCCC
T ss_pred HHHHHHHHhCCCEEEEECCCcCC
Confidence 99875 489999999754
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=98.01 E-value=3e-05 Score=75.94 Aligned_cols=109 Identities=17% Similarity=0.031 Sum_probs=69.5
Q ss_pred CCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh
Q 014694 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 8 ~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
.++++|+|+||+||+|..++..|+..+. ..++.+.++++++ ....++.. ...... +.. +.+..++.+.++
T Consensus 6 ~~~mKI~ViGAaG~VG~~la~~L~~~g~-----~~ev~l~Di~~~~--~~~~dL~~-~~~~~~-v~~-~~~t~d~~~al~ 75 (326)
T 1smk_A 6 APGFKVAILGAAGGIGQPLAMLMKMNPL-----VSVLHLYDVVNAP--GVTADISH-MDTGAV-VRG-FLGQQQLEAALT 75 (326)
T ss_dssp --CEEEEEETTTSTTHHHHHHHHHHCTT-----EEEEEEEESSSHH--HHHHHHHT-SCSSCE-EEE-EESHHHHHHHHT
T ss_pred CCCCEEEEECCCChHHHHHHHHHHhCCC-----CCEEEEEeCCCcH--hHHHHhhc-ccccce-EEE-EeCCCCHHHHcC
Confidence 3568999999999999999999987652 1478888987762 22222321 011111 222 334567888999
Q ss_pred ccCeeEeccCCCCCCc--------------HHHHHHHHHcCCc--EEecCCcHHH
Q 014694 88 QTKLLLNCVGPYRLHG--------------DPVAAACVHSGCD--YLDISGEPEF 126 (420)
Q Consensus 88 ~~dvVIn~aGp~~~~~--------------~~vv~Ac~~~g~~--yvdisge~~~ 126 (420)
++|+||+++|.....+ ..++++|.+.+.+ .+.+|-....
T Consensus 76 gaDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~SNPv~~ 130 (326)
T 1smk_A 76 GMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISNPVNS 130 (326)
T ss_dssp TCSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHH
T ss_pred CCCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCchHH
Confidence 9999999999654332 5677788877653 4444433333
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.00 E-value=7.9e-06 Score=92.74 Aligned_cols=82 Identities=13% Similarity=0.099 Sum_probs=66.1
Q ss_pred ceEEEEcCCcH-HHHHHHHHHHHhCCCCCCCcceEEEE-ecChhHHHHHHHHhCCC---CCCCccEEEEeCCCHHHHHHH
Q 014694 11 FDVIILGASGF-TGKYVVREALKLFNFPSSPIKSLALA-GRNPTRVKQALQWASPS---HSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 11 ~~IvV~GATG~-~G~~va~~L~~~~~~~~~~~~~v~ia-gRs~~kl~~~~~~l~~~---~~~~~~~i~~D~~d~~sl~~~ 85 (420)
..+||+||+++ ||+.+++.|+++| .+|++. +|+.++++++.+++... ...++.++.+|++|.++++++
T Consensus 477 KvALVTGASgGGIGrAIAr~LA~~G-------A~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaL 549 (1688)
T 2pff_A 477 KYVLITGAGKGSIGAEVLQGLLQGG-------AKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEAL 549 (1688)
T ss_dssp CCEEECSCSSSSTHHHHHHHHHHHT-------CEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHH
T ss_pred CEEEEECCChHHHHHHHHHHHHHCc-------CEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHH
Confidence 36999999998 9999999999998 788887 68877776666666321 123567899999999999988
Q ss_pred Hh-------------ccCeeEeccCCC
Q 014694 86 CS-------------QTKLLLNCVGPY 99 (420)
Q Consensus 86 ~~-------------~~dvVIn~aGp~ 99 (420)
++ ..|+|||+||..
T Consensus 550 Ve~I~e~~~~~GfG~~IDILVNNAGI~ 576 (1688)
T 2pff_A 550 IEFIYDTEKNGGLGWDLDAIIPFAAIP 576 (1688)
T ss_dssp HHHHHSCTTSSSCCCCCCEEECCCCCC
T ss_pred HHHHHHhccccccCCCCeEEEECCCcC
Confidence 74 479999999964
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=97.99 E-value=1e-05 Score=81.72 Aligned_cols=78 Identities=14% Similarity=0.023 Sum_probs=61.5
Q ss_pred cceEEEEcCCcHHHHHHHHHHHH-hCCCCCCCcceEEEEecChhHHH---------------HHHHHhCCCCCCCccEEE
Q 014694 10 LFDVIILGASGFTGKYVVREALK-LFNFPSSPIKSLALAGRNPTRVK---------------QALQWASPSHSLSIPILT 73 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~-~~~~~~~~~~~v~iagRs~~kl~---------------~~~~~l~~~~~~~~~~i~ 73 (420)
...+||+||++.||+.+++.|++ .| .+|++++|+.+.++ +.+++. ..++..+.
T Consensus 61 gKvaLVTGASsGIG~AiA~~LA~~~G-------A~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~----G~~a~~i~ 129 (422)
T 3s8m_A 61 PKKVLVIGASSGYGLASRITAAFGFG-------ADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAA----GLYSKSIN 129 (422)
T ss_dssp CSEEEEESCSSHHHHHHHHHHHHHHC-------CEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHT----TCCEEEEE
T ss_pred CCEEEEECCChHHHHHHHHHHHHhCC-------CEEEEEeCCchhhhhhhcccccchhHHHHHHHHhc----CCcEEEEE
Confidence 44799999999999999999999 88 89999999765432 222222 34567889
Q ss_pred EeCCCHHHHHHHHh--------ccCeeEeccCC
Q 014694 74 ADTTDPPSLHRLCS--------QTKLLLNCVGP 98 (420)
Q Consensus 74 ~D~~d~~sl~~~~~--------~~dvVIn~aGp 98 (420)
+|++|+++++++++ +.|++||+||.
T Consensus 130 ~Dvtd~~~v~~~v~~i~~~~~G~IDiLVNNAG~ 162 (422)
T 3s8m_A 130 GDAFSDAARAQVIELIKTEMGGQVDLVVYSLAS 162 (422)
T ss_dssp SCTTSHHHHHHHHHHHHHHSCSCEEEEEECCCC
T ss_pred ecCCCHHHHHHHHHHHHHHcCCCCCEEEEcCcc
Confidence 99999998888764 46999999985
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=97.98 E-value=4.5e-05 Score=74.27 Aligned_cols=79 Identities=15% Similarity=0.131 Sum_probs=63.6
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC---hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN---PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs---~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
..+++|+|| |.+|+.++..|++.+. -+|.+++|+ .++.+++.+++.. .....+...++.+.+++.+.+
T Consensus 154 gk~~lVlGa-GG~g~aia~~L~~~Ga------~~V~i~nR~~~~~~~a~~la~~~~~--~~~~~~~~~~~~~~~~l~~~l 224 (315)
T 3tnl_A 154 GKKMTICGA-GGAATAICIQAALDGV------KEISIFNRKDDFYANAEKTVEKINS--KTDCKAQLFDIEDHEQLRKEI 224 (315)
T ss_dssp TSEEEEECC-SHHHHHHHHHHHHTTC------SEEEEEECSSTTHHHHHHHHHHHHH--HSSCEEEEEETTCHHHHHHHH
T ss_pred CCEEEEECC-ChHHHHHHHHHHHCCC------CEEEEEECCCchHHHHHHHHHHhhh--hcCCceEEeccchHHHHHhhh
Confidence 347999997 8899999999999871 389999999 8898888877641 112345567888888899999
Q ss_pred hccCeeEeccC
Q 014694 87 SQTKLLLNCVG 97 (420)
Q Consensus 87 ~~~dvVIn~aG 97 (420)
.++|+||||..
T Consensus 225 ~~aDiIINaTp 235 (315)
T 3tnl_A 225 AESVIFTNATG 235 (315)
T ss_dssp HTCSEEEECSS
T ss_pred cCCCEEEECcc
Confidence 99999999985
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=97.97 E-value=3.7e-05 Score=74.77 Aligned_cols=107 Identities=21% Similarity=0.206 Sum_probs=68.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEec--ChhHHHHHHHHhCC--CCC-CCccEEEEeCCCHHHHHHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR--NPTRVKQALQWASP--SHS-LSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagR--s~~kl~~~~~~l~~--~~~-~~~~~i~~D~~d~~sl~~~ 85 (420)
|+|+|+||+|++|+.++..|+..+. ..++.+.++ +.++++....++.. +.. .++.+...+ +++.+.
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~-----~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~~a 71 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPF-----MKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DENLRI 71 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTT-----CCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCGGG
T ss_pred CEEEEECCCChhHHHHHHHHHhCCC-----CCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchHHH
Confidence 5899999999999999999987652 146888998 77666543322210 011 122322211 235667
Q ss_pred HhccCeeEeccCCCCCCc--------------HHHHHHHHHcCCc--EEecCCcHHHH
Q 014694 86 CSQTKLLLNCVGPYRLHG--------------DPVAAACVHSGCD--YLDISGEPEFM 127 (420)
Q Consensus 86 ~~~~dvVIn~aGp~~~~~--------------~~vv~Ac~~~g~~--yvdisge~~~~ 127 (420)
++++|+|||++|.....+ ..++++|.+++ + .+.+|....-+
T Consensus 72 l~gaD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SNPv~~~ 128 (313)
T 1hye_A 72 IDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITNPVDVM 128 (313)
T ss_dssp GTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSSSHHHH
T ss_pred hCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecCcHHHH
Confidence 899999999999655433 57788888876 5 44444433333
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=97.95 E-value=2.5e-05 Score=79.09 Aligned_cols=81 Identities=12% Similarity=-0.003 Sum_probs=62.5
Q ss_pred CCcceEEEEcCCcHHHHH--HHHHHHHhCCCCCCCcceEEEEecChh---------------HHHHHHHHhCCCCCCCcc
Q 014694 8 PELFDVIILGASGFTGKY--VVREALKLFNFPSSPIKSLALAGRNPT---------------RVKQALQWASPSHSLSIP 70 (420)
Q Consensus 8 ~~~~~IvV~GATG~~G~~--va~~L~~~~~~~~~~~~~v~iagRs~~---------------kl~~~~~~l~~~~~~~~~ 70 (420)
.....++|+||++.||+. +++.+++.| .+|++++|+.. .+++..++. ..++.
T Consensus 58 ~~gK~aLVTGassGIG~A~aia~ala~~G-------a~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~----g~~~~ 126 (418)
T 4eue_A 58 RGPKKVLIVGASSGFGLATRISVAFGGPE-------AHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKK----GLVAK 126 (418)
T ss_dssp CCCSEEEEESCSSHHHHHHHHHHHHSSSC-------CEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHT----TCCEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHHhCC-------CEEEEEecCcchhhhcccccccchHHHHHHHHHHc----CCcEE
Confidence 344579999999999999 999988877 79999998643 222233332 34577
Q ss_pred EEEEeCCCHHHHHHHHh-------ccCeeEeccCCC
Q 014694 71 ILTADTTDPPSLHRLCS-------QTKLLLNCVGPY 99 (420)
Q Consensus 71 ~i~~D~~d~~sl~~~~~-------~~dvVIn~aGp~ 99 (420)
.+.+|++|+++++++++ +.|++||+||..
T Consensus 127 ~~~~Dvtd~~~v~~~v~~i~~~~G~IDiLVnNAG~~ 162 (418)
T 4eue_A 127 NFIEDAFSNETKDKVIKYIKDEFGKIDLFVYSLAAP 162 (418)
T ss_dssp EEESCTTCHHHHHHHHHHHHHTTCCEEEEEECCCCS
T ss_pred EEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCccc
Confidence 89999999999988876 469999999863
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=97.93 E-value=2.1e-05 Score=91.70 Aligned_cols=82 Identities=13% Similarity=0.103 Sum_probs=65.5
Q ss_pred ceEEEEcCCcH-HHHHHHHHHHHhCCCCCCCcceEEEE-ecChhHHHHHHHHhCC---CCCCCccEEEEeCCCHHHHHHH
Q 014694 11 FDVIILGASGF-TGKYVVREALKLFNFPSSPIKSLALA-GRNPTRVKQALQWASP---SHSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 11 ~~IvV~GATG~-~G~~va~~L~~~~~~~~~~~~~v~ia-gRs~~kl~~~~~~l~~---~~~~~~~~i~~D~~d~~sl~~~ 85 (420)
..+|||||+++ ||+.+++.|+++| .+|+++ +|+.++++++.+++.. ....++.++.+|++|.++++++
T Consensus 676 KvaLVTGASsGgIG~aIA~~La~~G-------A~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~al 748 (1887)
T 2uv8_A 676 KYVLITGAGKGSIGAEVLQGLLQGG-------AKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEAL 748 (1887)
T ss_dssp CEEEEESCCSSSHHHHHHHHHHHTT-------CEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHH
T ss_pred CEEEEECCCCcHHHHHHHHHHHHCC-------CEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHH
Confidence 46999999998 9999999999998 789888 6888777665554410 0124577899999999999988
Q ss_pred Hh-------------ccCeeEeccCCC
Q 014694 86 CS-------------QTKLLLNCVGPY 99 (420)
Q Consensus 86 ~~-------------~~dvVIn~aGp~ 99 (420)
++ ..|+|||+||..
T Consensus 749 v~~i~~~~~~~G~G~~LDiLVNNAGi~ 775 (1887)
T 2uv8_A 749 IEFIYDTEKNGGLGWDLDAIIPFAAIP 775 (1887)
T ss_dssp HHHHHSCTTTTSCCCCCSEEEECCCCC
T ss_pred HHHHHHhccccccCCCCeEEEECCCcC
Confidence 75 479999999964
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=97.92 E-value=2.4e-05 Score=67.68 Aligned_cols=105 Identities=11% Similarity=0.110 Sum_probs=73.2
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-Hh
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CS 87 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~-~~ 87 (420)
...+|+|+|+ |.+|+.+++.|.+.+ .+|.+.+|++++++.+.+ ..+..++.+|..+++.+.+. +.
T Consensus 18 ~~~~v~IiG~-G~iG~~la~~L~~~g-------~~V~vid~~~~~~~~~~~------~~g~~~~~~d~~~~~~l~~~~~~ 83 (155)
T 2g1u_A 18 KSKYIVIFGC-GRLGSLIANLASSSG-------HSVVVVDKNEYAFHRLNS------EFSGFTVVGDAAEFETLKECGME 83 (155)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTT-------CEEEEEESCGGGGGGSCT------TCCSEEEESCTTSHHHHHTTTGG
T ss_pred CCCcEEEECC-CHHHHHHHHHHHhCC-------CeEEEEECCHHHHHHHHh------cCCCcEEEecCCCHHHHHHcCcc
Confidence 3458999996 999999999999887 789999999988743321 12355677888888887776 78
Q ss_pred ccCeeEeccCCCCCCcHHHHHHHHH-cCC-cEEecCCcHHHHH
Q 014694 88 QTKLLLNCVGPYRLHGDPVAAACVH-SGC-DYLDISGEPEFME 128 (420)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~Ac~~-~g~-~yvdisge~~~~~ 128 (420)
++|+||.|++... ....+...+.. .+. ..+-.+..+...+
T Consensus 84 ~ad~Vi~~~~~~~-~~~~~~~~~~~~~~~~~iv~~~~~~~~~~ 125 (155)
T 2g1u_A 84 KADMVFAFTNDDS-TNFFISMNARYMFNVENVIARVYDPEKIK 125 (155)
T ss_dssp GCSEEEECSSCHH-HHHHHHHHHHHTSCCSEEEEECSSGGGHH
T ss_pred cCCEEEEEeCCcH-HHHHHHHHHHHHCCCCeEEEEECCHHHHH
Confidence 8999999998532 22445556665 554 3343343333333
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=97.91 E-value=2.6e-05 Score=90.81 Aligned_cols=81 Identities=11% Similarity=0.110 Sum_probs=64.1
Q ss_pred ceEEEEcCCcH-HHHHHHHHHHHhCCCCCCCcceEEEEe-cChhHHHHHHH----HhCCCCCCCccEEEEeCCCHHHHHH
Q 014694 11 FDVIILGASGF-TGKYVVREALKLFNFPSSPIKSLALAG-RNPTRVKQALQ----WASPSHSLSIPILTADTTDPPSLHR 84 (420)
Q Consensus 11 ~~IvV~GATG~-~G~~va~~L~~~~~~~~~~~~~v~iag-Rs~~kl~~~~~----~l~~~~~~~~~~i~~D~~d~~sl~~ 84 (420)
..+||+||+|+ ||+.+++.|+++| .+|++++ |+.+++++..+ ++.. ...++.++.+|++|.+++++
T Consensus 653 KvaLVTGASgGgIG~aIAr~LA~~G-------A~VVl~~~R~~~~l~~~a~eL~~el~~-~G~~v~~v~~DVsd~esV~a 724 (1878)
T 2uv9_A 653 KHALMTGAGAGSIGAEVLQGLLSGG-------AKVIVTTSRFSRQVTEYYQGIYARCGA-RGSQLVVVPFNQGSKQDVEA 724 (1878)
T ss_dssp CEEEEESCCTTSHHHHHHHHHHHTT-------CEEEEEESSCCHHHHHHHHHHHHHHCC-TTCEEEEEECCTTCHHHHHH
T ss_pred CEEEEECCCCcHHHHHHHHHHHHCC-------CEEEEEecCChHHHHHHHHHHHHHhhc-cCCeEEEEEcCCCCHHHHHH
Confidence 46999999999 9999999999998 7888884 77776655443 3321 12457789999999999999
Q ss_pred HHh-----------ccCeeEeccCCC
Q 014694 85 LCS-----------QTKLLLNCVGPY 99 (420)
Q Consensus 85 ~~~-----------~~dvVIn~aGp~ 99 (420)
+++ ..|+|||+||..
T Consensus 725 lv~~i~~~~~~~G~~IDiLVnNAGi~ 750 (1878)
T 2uv9_A 725 LVNYIYDTKNGLGWDLDYVVPFAAIP 750 (1878)
T ss_dssp HHHHHHCSSSSCCCCCSEEEECCCCC
T ss_pred HHHHHHHhhcccCCCCcEEEeCcccc
Confidence 875 479999999964
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=97.89 E-value=6.6e-05 Score=66.61 Aligned_cols=103 Identities=19% Similarity=0.165 Sum_probs=75.1
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHh-CCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH--H
Q 014694 10 LFDVIILGASGFTGKYVVREALKL-FNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL--C 86 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~-~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~--~ 86 (420)
..+|+|+|+ |.+|+.+++.|.+. + ++|.+.+|++++++.+.+ . ++.++.+|.+|++.+.++ +
T Consensus 39 ~~~v~IiG~-G~~G~~~a~~L~~~~g-------~~V~vid~~~~~~~~~~~-~------g~~~~~gd~~~~~~l~~~~~~ 103 (183)
T 3c85_A 39 HAQVLILGM-GRIGTGAYDELRARYG-------KISLGIEIREEAAQQHRS-E------GRNVISGDATDPDFWERILDT 103 (183)
T ss_dssp TCSEEEECC-SHHHHHHHHHHHHHHC-------SCEEEEESCHHHHHHHHH-T------TCCEEECCTTCHHHHHTBCSC
T ss_pred CCcEEEECC-CHHHHHHHHHHHhccC-------CeEEEEECCHHHHHHHHH-C------CCCEEEcCCCCHHHHHhccCC
Confidence 457999985 99999999999998 8 789999999998876543 2 356788899999888887 7
Q ss_pred hccCeeEeccCCCCCCcHHHHHHHHHcC-C-cEEecCCcHHHHH
Q 014694 87 SQTKLLLNCVGPYRLHGDPVAAACVHSG-C-DYLDISGEPEFME 128 (420)
Q Consensus 87 ~~~dvVIn~aGp~~~~~~~vv~Ac~~~g-~-~yvdisge~~~~~ 128 (420)
.++|+||.+.+... ....++..+.+.+ . +.+..+-.....+
T Consensus 104 ~~ad~vi~~~~~~~-~~~~~~~~~~~~~~~~~ii~~~~~~~~~~ 146 (183)
T 3c85_A 104 GHVKLVLLAMPHHQ-GNQTALEQLQRRNYKGQIAAIAEYPDQLE 146 (183)
T ss_dssp CCCCEEEECCSSHH-HHHHHHHHHHHTTCCSEEEEEESSHHHHH
T ss_pred CCCCEEEEeCCChH-HHHHHHHHHHHHCCCCEEEEEECCHHHHH
Confidence 88999999887422 2244556666665 2 3333333444433
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=97.88 E-value=7.9e-05 Score=63.37 Aligned_cols=104 Identities=11% Similarity=0.100 Sum_probs=74.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-Hhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~-~~~~ 89 (420)
.+|+|+|+ |.+|+.+++.|.+.+ ++|.+.++++++++.+.+ .++.++.+|.++++.+.++ +.++
T Consensus 8 ~~viIiG~-G~~G~~la~~L~~~g-------~~v~vid~~~~~~~~~~~-------~g~~~i~gd~~~~~~l~~a~i~~a 72 (140)
T 3fwz_A 8 NHALLVGY-GRVGSLLGEKLLASD-------IPLVVIETSRTRVDELRE-------RGVRAVLGNAANEEIMQLAHLECA 72 (140)
T ss_dssp SCEEEECC-SHHHHHHHHHHHHTT-------CCEEEEESCHHHHHHHHH-------TTCEEEESCTTSHHHHHHTTGGGC
T ss_pred CCEEEECc-CHHHHHHHHHHHHCC-------CCEEEEECCHHHHHHHHH-------cCCCEEECCCCCHHHHHhcCcccC
Confidence 47999997 999999999999987 789999999999877654 2467889999999988876 6789
Q ss_pred CeeEeccCCCCCCcHHHHHHHHHc--CCcEEecCCcHHHHHHH
Q 014694 90 KLLLNCVGPYRLHGDPVAAACVHS--GCDYLDISGEPEFMERM 130 (420)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~Ac~~~--g~~yvdisge~~~~~~~ 130 (420)
|+||.+.+.... ...++..+.+. ..+.+-..-.....+.+
T Consensus 73 d~vi~~~~~~~~-n~~~~~~a~~~~~~~~iiar~~~~~~~~~l 114 (140)
T 3fwz_A 73 KWLILTIPNGYE-AGEIVASARAKNPDIEIIARAHYDDEVAYI 114 (140)
T ss_dssp SEEEECCSCHHH-HHHHHHHHHHHCSSSEEEEEESSHHHHHHH
T ss_pred CEEEEECCChHH-HHHHHHHHHHHCCCCeEEEEECCHHHHHHH
Confidence 999988864321 12233444443 23444444445544444
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=97.83 E-value=2.6e-05 Score=70.83 Aligned_cols=75 Identities=13% Similarity=0.073 Sum_probs=54.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
|+|.|+||+|++|+.+++.|++.+ ++|.+.+|++++.+.+.+.++. .+. ..|+. .+++.++++++|
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g-------~~V~~~~r~~~~~~~~~~~~~~----~~~--~~~~~-~~~~~~~~~~~D 66 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLG-------HEIVVGSRREEKAEAKAAEYRR----IAG--DASIT-GMKNEDAAEACD 66 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT-------CEEEEEESSHHHHHHHHHHHHH----HHS--SCCEE-EEEHHHHHHHCS
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhcc----ccc--cCCCC-hhhHHHHHhcCC
Confidence 479999999999999999999887 7899999999888776654320 000 00111 134566778999
Q ss_pred eeEeccCCC
Q 014694 91 LLLNCVGPY 99 (420)
Q Consensus 91 vVIn~aGp~ 99 (420)
+||+|+.+.
T Consensus 67 ~Vi~~~~~~ 75 (212)
T 1jay_A 67 IAVLTIPWE 75 (212)
T ss_dssp EEEECSCHH
T ss_pred EEEEeCChh
Confidence 999999764
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=97.81 E-value=0.00013 Score=70.63 Aligned_cols=93 Identities=9% Similarity=0.014 Sum_probs=62.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEec--ChhHHHHHHHHhCC--CCCCCccEEEEeCCCHHHHHHHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR--NPTRVKQALQWASP--SHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagR--s~~kl~~~~~~l~~--~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
|+|+|+||+|++|+.++..|+..+. ..++.+.++ +.++++....++.. ....++.+. .+ + .+.+
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~-----~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~-~~--~----~~a~ 68 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDI-----ADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVR-QG--G----YEDT 68 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-----CSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEE-EC--C----GGGG
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC-----CCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEE-eC--C----HHHh
Confidence 5899999999999999999988652 136888999 88776554433321 001233333 22 2 3458
Q ss_pred hccCeeEeccCCCCCCc--------------HHHHHHHHHcCC
Q 014694 87 SQTKLLLNCVGPYRLHG--------------DPVAAACVHSGC 115 (420)
Q Consensus 87 ~~~dvVIn~aGp~~~~~--------------~~vv~Ac~~~g~ 115 (420)
+++|+|||++|.....+ ..++++|.+.+.
T Consensus 69 ~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p 111 (303)
T 1o6z_A 69 AGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHND 111 (303)
T ss_dssp TTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred CCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 89999999999655443 456677777654
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=97.80 E-value=5.7e-06 Score=80.86 Aligned_cols=81 Identities=12% Similarity=0.062 Sum_probs=56.0
Q ss_pred ceEEEEcCCc--HHHHHHHHHHHHhCCCCCCCcceEEEEecCh---------hHHHHHHHHhCC--CCCCCccEEEEeCC
Q 014694 11 FDVIILGASG--FTGKYVVREALKLFNFPSSPIKSLALAGRNP---------TRVKQALQWASP--SHSLSIPILTADTT 77 (420)
Q Consensus 11 ~~IvV~GATG--~~G~~va~~L~~~~~~~~~~~~~v~iagRs~---------~kl~~~~~~l~~--~~~~~~~~i~~D~~ 77 (420)
..+|||||++ .||+.++++|++++ .+|++.+|+. ++++...+.... .....+.++.+|++
T Consensus 3 k~~lITGas~~~GIG~aiA~~la~~G-------~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~ 75 (329)
T 3lt0_A 3 DICFIAGIGDTNGYGWGIAKELSKRN-------VKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDAS 75 (329)
T ss_dssp CEEEEECCSSSSSHHHHHHHHHHHTT-------CEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTT
T ss_pred cEEEEECCCCCCchHHHHHHHHHHCC-------CEEEEEecCccccccccchHHHHHHHHHHHhhccccccccccccccc
Confidence 3699999875 89999999999998 7999666554 333322222211 01123567888888
Q ss_pred CH--H------------------HHHHHHh-------ccCeeEeccCC
Q 014694 78 DP--P------------------SLHRLCS-------QTKLLLNCVGP 98 (420)
Q Consensus 78 d~--~------------------sl~~~~~-------~~dvVIn~aGp 98 (420)
+. + ++.++++ ..|+|||+||.
T Consensus 76 ~~~~~~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi 123 (329)
T 3lt0_A 76 FDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLAN 123 (329)
T ss_dssp CSSGGGCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCC
T ss_pred ccchhhhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcc
Confidence 77 6 7776655 47999999995
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=97.80 E-value=9.1e-05 Score=71.05 Aligned_cols=112 Identities=16% Similarity=0.151 Sum_probs=72.0
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
..+++|+|| |.+|+.++..|++.+. -+|.+++|+.++.+++.+++.. ....+.+...+. +++.+.++++
T Consensus 127 ~k~vlVlGa-GG~g~aia~~L~~~G~------~~v~i~~R~~~~a~~la~~~~~-~~~~~~i~~~~~---~~l~~~l~~~ 195 (283)
T 3jyo_A 127 LDSVVQVGA-GGVGNAVAYALVTHGV------QKLQVADLDTSRAQALADVINN-AVGREAVVGVDA---RGIEDVIAAA 195 (283)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTC------SEEEEECSSHHHHHHHHHHHHH-HHTSCCEEEECS---TTHHHHHHHS
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCCC------CEEEEEECCHHHHHHHHHHHHh-hcCCceEEEcCH---HHHHHHHhcC
Confidence 347999998 8899999999999872 3799999999999888876631 011234444544 4467778899
Q ss_pred CeeEeccCCCCC--CcHHHHHHHHHcCCcEEecCC---cHHHHHHHHH
Q 014694 90 KLLLNCVGPYRL--HGDPVAAACVHSGCDYLDISG---EPEFMERMEA 132 (420)
Q Consensus 90 dvVIn~aGp~~~--~~~~vv~Ac~~~g~~yvdisg---e~~~~~~~~~ 132 (420)
|+||||...... ...++-..+...+...+|+.- +.+|++...+
T Consensus 196 DiVInaTp~Gm~~~~~~pi~~~~l~~~~~v~DlvY~P~~T~ll~~A~~ 243 (283)
T 3jyo_A 196 DGVVNATPMGMPAHPGTAFDVSCLTKDHWVGDVVYMPIETELLKAARA 243 (283)
T ss_dssp SEEEECSSTTSTTSCSCSSCGGGCCTTCEEEECCCSSSSCHHHHHHHH
T ss_pred CEEEECCCCCCCCCCCCCCCHHHhCCCCEEEEecCCCCCCHHHHHHHH
Confidence 999999853211 111222223334445666654 3455555443
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=97.77 E-value=1.5e-05 Score=68.18 Aligned_cols=90 Identities=11% Similarity=0.132 Sum_probs=65.3
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
..+|+|+|+ |.+|+.+++.|.+.+ .++.+.+|+.++.+++.++++ ..+ .+. +++.++++++
T Consensus 21 ~~~v~iiG~-G~iG~~~a~~l~~~g-------~~v~v~~r~~~~~~~~a~~~~------~~~--~~~---~~~~~~~~~~ 81 (144)
T 3oj0_A 21 GNKILLVGN-GMLASEIAPYFSYPQ-------YKVTVAGRNIDHVRAFAEKYE------YEY--VLI---NDIDSLIKNN 81 (144)
T ss_dssp CCEEEEECC-SHHHHHHGGGCCTTT-------CEEEEEESCHHHHHHHHHHHT------CEE--EEC---SCHHHHHHTC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCC-------CEEEEEcCCHHHHHHHHHHhC------Cce--Eee---cCHHHHhcCC
Confidence 357999996 999999999998866 679999999999988887763 122 223 3356778899
Q ss_pred CeeEeccCCCCCCcHHHHHHHHHcCCcEEecC
Q 014694 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdis 121 (420)
|+||+|++.....- -..+.+.|.+++|++
T Consensus 82 Divi~at~~~~~~~---~~~~l~~g~~vid~~ 110 (144)
T 3oj0_A 82 DVIITATSSKTPIV---EERSLMPGKLFIDLG 110 (144)
T ss_dssp SEEEECSCCSSCSB---CGGGCCTTCEEEECC
T ss_pred CEEEEeCCCCCcEe---eHHHcCCCCEEEEcc
Confidence 99999998543211 113345577888884
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.75 E-value=9.2e-05 Score=73.62 Aligned_cols=98 Identities=17% Similarity=0.185 Sum_probs=72.4
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
..+|+|+|+ |.+|+.+++.+...+ .+|.+.+|+.++++.+.+.++ .. +.+|..+.+++.+.++++
T Consensus 166 ~~~V~ViGa-G~iG~~~a~~l~~~G-------a~V~~~d~~~~~~~~~~~~~g------~~-~~~~~~~~~~l~~~~~~~ 230 (369)
T 2eez_A 166 PASVVILGG-GTVGTNAAKIALGMG-------AQVTILDVNHKRLQYLDDVFG------GR-VITLTATEANIKKSVQHA 230 (369)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHTT------TS-EEEEECCHHHHHHHHHHC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCC-------CEEEEEECCHHHHHHHHHhcC------ce-EEEecCCHHHHHHHHhCC
Confidence 468999999 999999999999887 799999999999877665553 12 557778889999999999
Q ss_pred CeeEeccCCCC-----CCcHHHHHHHHHcCCcEEecCCc
Q 014694 90 KLLLNCVGPYR-----LHGDPVAAACVHSGCDYLDISGE 123 (420)
Q Consensus 90 dvVIn~aGp~~-----~~~~~vv~Ac~~~g~~yvdisge 123 (420)
|+||+|+|... ......++.+ +.|..+||++..
T Consensus 231 DvVi~~~g~~~~~~~~li~~~~l~~m-k~gg~iV~v~~~ 268 (369)
T 2eez_A 231 DLLIGAVLVPGAKAPKLVTRDMLSLM-KEGAVIVDVAVD 268 (369)
T ss_dssp SEEEECCC-------CCSCHHHHTTS-CTTCEEEECC--
T ss_pred CEEEECCCCCccccchhHHHHHHHhh-cCCCEEEEEecC
Confidence 99999998432 1123444443 345667887643
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=97.75 E-value=0.00017 Score=70.09 Aligned_cols=80 Identities=15% Similarity=0.102 Sum_probs=61.3
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC---hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN---PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs---~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
..+++|+|| |.+|+.++..|++.+. -+|.++.|+ .++.+++.+++.. .....+...+..+.+.+.+.+
T Consensus 148 gk~~lVlGA-GGaaraia~~L~~~G~------~~v~v~nRt~~~~~~a~~la~~~~~--~~~~~v~~~~~~~l~~~~~~l 218 (312)
T 3t4e_A 148 GKTMVLLGA-GGAATAIGAQAAIEGI------KEIKLFNRKDDFFEKAVAFAKRVNE--NTDCVVTVTDLADQHAFTEAL 218 (312)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTC------SEEEEEECSSTHHHHHHHHHHHHHH--HSSCEEEEEETTCHHHHHHHH
T ss_pred CCEEEEECc-CHHHHHHHHHHHHcCC------CEEEEEECCCchHHHHHHHHHHhhh--ccCcceEEechHhhhhhHhhc
Confidence 347999997 8899999999999872 389999999 8888888876641 112344556777755567778
Q ss_pred hccCeeEeccCC
Q 014694 87 SQTKLLLNCVGP 98 (420)
Q Consensus 87 ~~~dvVIn~aGp 98 (420)
.++|+||||...
T Consensus 219 ~~~DiIINaTp~ 230 (312)
T 3t4e_A 219 ASADILTNGTKV 230 (312)
T ss_dssp HHCSEEEECSST
T ss_pred cCceEEEECCcC
Confidence 899999999854
|
| >2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A | Back alignment and structure |
|---|
Probab=97.69 E-value=1.6e-05 Score=78.71 Aligned_cols=106 Identities=12% Similarity=0.083 Sum_probs=64.2
Q ss_pred CCCCCCCCCcceEEEEcCCcHHHHHHHHHHHHhC-----CCCCCCcceEEEEe-c-ChhH-HHHHHHHhCCCCCCCccEE
Q 014694 1 MQAQSQIPELFDVIILGASGFTGKYVVREALKLF-----NFPSSPIKSLALAG-R-NPTR-VKQALQWASPSHSLSIPIL 72 (420)
Q Consensus 1 m~~~~~~~~~~~IvV~GATG~~G~~va~~L~~~~-----~~~~~~~~~v~iag-R-s~~k-l~~~~~~l~~~~~~~~~~i 72 (420)
|+..+.|. .++|.|.||||++|+.+++.|.++. . .++..+. | +..+ +..+...+. ...++.+
T Consensus 1 ~~~~~~M~-m~kVaIvGATG~vG~~llr~L~~~~~~~~~~------~ei~~l~s~~~agk~~~~~~~~l~--~~~~~~~- 70 (352)
T 2nqt_A 1 MQNRQVAN-ATKVAVAGASGYAGGEILRLLLGHPAYADGR------LRIGALTAATSAGSTLGEHHPHLT--PLAHRVV- 70 (352)
T ss_dssp -----CCS-CEEEEEETTTSHHHHHHHHHHHTCHHHHTTS------EEEEEEEESSCTTSBGGGTCTTCG--GGTTCBC-
T ss_pred CCcccccc-CCEEEEECCCCHHHHHHHHHHHcCCCCCCcc------EEEEEEECCCcCCCchhhhccccc--ccceeee-
Confidence 55444453 3799999999999999999998764 2 5665544 3 3222 211100010 0012222
Q ss_pred EEeCCCHHHHHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHH
Q 014694 73 TADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPE 125 (420)
Q Consensus 73 ~~D~~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~ 125 (420)
.|. |+++ ++++|+||.|+|... ...++.++ ++|+..||+|+...
T Consensus 71 -~~~-~~~~----~~~~DvVf~alg~~~--s~~~~~~~-~~G~~vIDlSa~~R 114 (352)
T 2nqt_A 71 -EPT-EAAV----LGGHDAVFLALPHGH--SAVLAQQL-SPETLIIDCGADFR 114 (352)
T ss_dssp -EEC-CHHH----HTTCSEEEECCTTSC--CHHHHHHS-CTTSEEEECSSTTT
T ss_pred -ccC-CHHH----hcCCCEEEECCCCcc--hHHHHHHH-hCCCEEEEECCCcc
Confidence 233 3332 458999999998643 57888888 99999999997753
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=97.68 E-value=6.8e-05 Score=79.45 Aligned_cols=78 Identities=21% Similarity=0.144 Sum_probs=57.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh---------hHHHHHHHHhCCCCCCCccEEEEeCCCHHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP---------TRVKQALQWASPSHSLSIPILTADTTDPPS 81 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~---------~kl~~~~~~l~~~~~~~~~~i~~D~~d~~s 81 (420)
..++||||++.||+.+++.|+++| .+|++.+|+. ++++++.+++.. .... ..+|+.|.++
T Consensus 9 kvalVTGas~GIG~a~A~~la~~G-------a~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~---~g~~-~~~d~~d~~~ 77 (604)
T 2et6_A 9 KVVIITGAGGGLGKYYSLEFAKLG-------AKVVVNDLGGALNGQGGNSKAADVVVDEIVK---NGGV-AVADYNNVLD 77 (604)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT-------CEEEEECC-----------CHHHHHHHHHHH---TTCE-EEEECCCTTC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHcC-------CEEEEEeCCccccccccchHHHHHHHHHHHh---cCCe-EEEEcCCHHH
Confidence 369999999999999999999998 7999988765 667777666631 1112 3468877765
Q ss_pred HHHHHh-------ccCeeEeccCCC
Q 014694 82 LHRLCS-------QTKLLLNCVGPY 99 (420)
Q Consensus 82 l~~~~~-------~~dvVIn~aGp~ 99 (420)
++++++ +.|++||+||..
T Consensus 78 ~~~~v~~~~~~~G~iDiLVnNAGi~ 102 (604)
T 2et6_A 78 GDKIVETAVKNFGTVHVIINNAGIL 102 (604)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCC
Confidence 555443 589999999964
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=97.67 E-value=5.7e-05 Score=73.10 Aligned_cols=34 Identities=18% Similarity=0.114 Sum_probs=30.5
Q ss_pred ceEEEEcC--CcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh
Q 014694 11 FDVIILGA--SGFTGKYVVREALKLFNFPSSPIKSLALAGRNP 51 (420)
Q Consensus 11 ~~IvV~GA--TG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~ 51 (420)
..++|+|| +++||+.+++.|++++ .+|++.+|+.
T Consensus 10 k~~lVTGa~~s~GIG~aia~~la~~G-------~~Vv~~~r~~ 45 (315)
T 2o2s_A 10 QTAFVAGVADSHGYGWAIAKHLASAG-------ARVALGTWPP 45 (315)
T ss_dssp CEEEEECCSSSSSHHHHHHHHHHTTT-------CEEEEEECHH
T ss_pred CEEEEeCCCCCCChHHHHHHHHHHCC-------CEEEEEeccc
Confidence 46999999 8999999999999998 7899998864
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=97.67 E-value=0.00011 Score=68.94 Aligned_cols=101 Identities=19% Similarity=0.181 Sum_probs=72.7
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh-------------------hHHHHHHHHhCCCCCCCcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-------------------TRVKQALQWASPSHSLSIP 70 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~-------------------~kl~~~~~~l~~~~~~~~~ 70 (420)
..+|+|+|+ |.+|..++++|++.|- -++.+++++. .|.+.+.+.+.. ..+.+.
T Consensus 31 ~~~VlVvG~-Gg~G~~va~~La~~Gv------~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~-~np~~~ 102 (249)
T 1jw9_B 31 DSRVLIVGL-GGLGCAASQYLASAGV------GNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTR-INPHIA 102 (249)
T ss_dssp HCEEEEECC-SHHHHHHHHHHHHHTC------SEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHH-HCTTSE
T ss_pred CCeEEEEee-CHHHHHHHHHHHHcCC------CeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHH-HCCCcE
Confidence 347999997 7899999999999982 4899999987 777776665531 012333
Q ss_pred E--EEEeCCCHHHHHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEec
Q 014694 71 I--LTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDI 120 (420)
Q Consensus 71 ~--i~~D~~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdi 120 (420)
+ +..+++ .+.+.++++++|+||+|..... ....+.++|.+.++.+|+.
T Consensus 103 v~~~~~~~~-~~~~~~~~~~~DvVi~~~d~~~-~~~~l~~~~~~~~~p~i~~ 152 (249)
T 1jw9_B 103 ITPVNALLD-DAELAALIAEHDLVLDCTDNVA-VRNQLNAGCFAAKVPLVSG 152 (249)
T ss_dssp EEEECSCCC-HHHHHHHHHTSSEEEECCSSHH-HHHHHHHHHHHHTCCEEEE
T ss_pred EEEEeccCC-HhHHHHHHhCCCEEEEeCCCHH-HHHHHHHHHHHcCCCEEEe
Confidence 3 333353 4677888999999999986432 2356678888888887775
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=97.67 E-value=8.6e-05 Score=90.64 Aligned_cols=80 Identities=14% Similarity=0.074 Sum_probs=66.6
Q ss_pred ceEEEEcCCcH-HHHHHHHHHHHhCCCCCCCcceEEEEecChhH-----HHHHHHHhCCCCCCCccEEEEeCCCHHHHHH
Q 014694 11 FDVIILGASGF-TGKYVVREALKLFNFPSSPIKSLALAGRNPTR-----VKQALQWASPSHSLSIPILTADTTDPPSLHR 84 (420)
Q Consensus 11 ~~IvV~GATG~-~G~~va~~L~~~~~~~~~~~~~v~iagRs~~k-----l~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~ 84 (420)
..++||||++. ||+.+++.|++.| .+|++.+|+.++ ++++.+++.. ...++..+.+|++|++++++
T Consensus 2137 KvaLVTGAs~GsIG~AiA~~La~~G-------A~Vvi~~r~~~~~~~~~~~~l~~~l~~-~G~~~~~v~~Dvtd~~~v~~ 2208 (3089)
T 3zen_D 2137 EVAVVTGASKGSIAASVVGQLLDGG-------ATVIATTSRLDDDRLAFYKQLYRDHAR-FDATLWVVPANMASYSDIDK 2208 (3089)
T ss_dssp CEEEEESCCTTSHHHHHHHHHHHTT-------CEEEEEESCCSHHHHHHHHHHHHHHCC-TTCEEEEEECCTTCHHHHHH
T ss_pred CEEEEeCCChhHHHHHHHHHHHHCC-------CEEEEEeCChhhhhhHHHHHHHHHHhh-cCCeEEEEEecCCCHHHHHH
Confidence 46999999999 9999999999998 899999998776 6677777642 23356678899999999998
Q ss_pred HHh-----------ccCeeEeccCC
Q 014694 85 LCS-----------QTKLLLNCVGP 98 (420)
Q Consensus 85 ~~~-----------~~dvVIn~aGp 98 (420)
+++ +.|++||+||.
T Consensus 2209 lv~~i~~~~~~~fG~IDILVNNAGi 2233 (3089)
T 3zen_D 2209 LVEWVGTEQTESLGPQSIHLKDAQT 2233 (3089)
T ss_dssp HHHHHTSCCEEEESSSEEEECCCCC
T ss_pred HHHHHHhhhhhhcCCCCEEEECCCc
Confidence 854 36899999996
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=97.67 E-value=0.00022 Score=68.75 Aligned_cols=99 Identities=11% Similarity=0.104 Sum_probs=69.8
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
..+++|+|+ |.+|+.++..|++.+. .+|.+++|+.++++++.++++. ... ++.+.+++.+.+.++
T Consensus 141 ~~~vlVlGa-Gg~g~aia~~L~~~G~------~~V~v~nR~~~ka~~la~~~~~----~~~----~~~~~~~~~~~~~~a 205 (297)
T 2egg_A 141 GKRILVIGA-GGGARGIYFSLLSTAA------ERIDMANRTVEKAERLVREGDE----RRS----AYFSLAEAETRLAEY 205 (297)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHTTTC------SEEEEECSSHHHHHHHHHHSCS----SSC----CEECHHHHHHTGGGC
T ss_pred CCEEEEECc-HHHHHHHHHHHHHCCC------CEEEEEeCCHHHHHHHHHHhhh----ccC----ceeeHHHHHhhhccC
Confidence 357999998 7899999999999871 3899999999999998887741 111 111335677788899
Q ss_pred CeeEeccCCCCCCc---HHHHHHHHHcCCcEEecCCc
Q 014694 90 KLLLNCVGPYRLHG---DPVAAACVHSGCDYLDISGE 123 (420)
Q Consensus 90 dvVIn~aGp~~~~~---~~vv~Ac~~~g~~yvdisge 123 (420)
|+||||++...... .++-..+...+..++|++-.
T Consensus 206 DivIn~t~~~~~~~~~~~~i~~~~l~~~~~v~D~~y~ 242 (297)
T 2egg_A 206 DIIINTTSVGMHPRVEVQPLSLERLRPGVIVSDIIYN 242 (297)
T ss_dssp SEEEECSCTTCSSCCSCCSSCCTTCCTTCEEEECCCS
T ss_pred CEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEcCCC
Confidence 99999998543210 11112345567778888764
|
| >5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00014 Score=71.40 Aligned_cols=120 Identities=14% Similarity=0.053 Sum_probs=75.5
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh--hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~--~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
.+++|+|+||+|++|+.++..|+..+..+....+.+.+.++++ ++++-...++.. ....+. .++.......+.+
T Consensus 2 ~~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~---~~~~~~-~~~~~~~~~~~~~ 77 (333)
T 5mdh_A 2 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQD---CALPLL-KDVIATDKEEIAF 77 (333)
T ss_dssp CCEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHH---TCCTTE-EEEEEESCHHHHT
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHh---hhhccc-CCEEEcCCcHHHh
Confidence 4689999999999999999999876521100114589999974 466555555531 111111 1222223456778
Q ss_pred hccCeeEeccCCCCCCc--------------HHHHHHHHHcCC---cEEecCCcHHHHHHHHH
Q 014694 87 SQTKLLLNCVGPYRLHG--------------DPVAAACVHSGC---DYLDISGEPEFMERMEA 132 (420)
Q Consensus 87 ~~~dvVIn~aGp~~~~~--------------~~vv~Ac~~~g~---~yvdisge~~~~~~~~~ 132 (420)
+++|+||+++|.....| ..+++++.+++- .++.+|.....+-.+..
T Consensus 78 ~daDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsNPvd~~t~~~~ 140 (333)
T 5mdh_A 78 KDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNPANTNCLTAS 140 (333)
T ss_dssp TTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHH
T ss_pred CCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCchHHHHHHHH
Confidence 99999999999654322 567777777764 36667655555544443
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00022 Score=63.90 Aligned_cols=75 Identities=13% Similarity=0.088 Sum_probs=55.3
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
....|+|+||+|.+|..+++.+...+ .+|++.+|++++++.+ ++++ .. ..+|..+.+..+.+.+
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G-------~~V~~~~~~~~~~~~~-~~~g------~~-~~~d~~~~~~~~~~~~~ 102 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIG-------ARIYTTAGSDAKREML-SRLG------VE-YVGDSRSVDFADEILEL 102 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHT-------CEEEEEESSHHHHHHH-HTTC------CS-EEEETTCSTHHHHHHHH
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHH-HHcC------CC-EEeeCCcHHHHHHHHHH
Confidence 34579999999999999999998887 7899999998887554 3332 22 2357776554444332
Q ss_pred ----ccCeeEeccCC
Q 014694 88 ----QTKLLLNCVGP 98 (420)
Q Consensus 88 ----~~dvVIn~aGp 98 (420)
+.|+||||+|+
T Consensus 103 ~~~~~~D~vi~~~g~ 117 (198)
T 1pqw_A 103 TDGYGVDVVLNSLAG 117 (198)
T ss_dssp TTTCCEEEEEECCCT
T ss_pred hCCCCCeEEEECCch
Confidence 48999999984
|
| >1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A | Back alignment and structure |
|---|
Probab=97.50 E-value=4.4e-05 Score=75.75 Aligned_cols=101 Identities=14% Similarity=0.087 Sum_probs=63.5
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
.+++|.|.||||++|+.+++.|.++. .+++..+.+..+.-+.+.+.... .... + ..|+.-.+ ++.+++
T Consensus 15 ~~~kV~IiGAtG~iG~~llr~L~~~p------~~elvai~~~~~~g~~~~~~~~~--~~~~-v-~~dl~~~~--~~~~~~ 82 (359)
T 1xyg_A 15 KDIRIGLLGASGYTGAEIVRLLANHP------HFQVTLMTADRKAGQSMESVFPH--LRAQ-K-LPTLVSVK--DADFST 82 (359)
T ss_dssp CCEEEEEECCSSHHHHHHHHHHHTCS------SEEEEEEBCSTTTTSCHHHHCGG--GTTS-C-CCCCBCGG--GCCGGG
T ss_pred cCcEEEEECcCCHHHHHHHHHHHcCC------CcEEEEEeCchhcCCCHHHhCch--hcCc-c-cccceecc--hhHhcC
Confidence 34789999999999999999998764 16766555433221112111110 0010 0 12322222 334568
Q ss_pred cCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcH
Q 014694 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEP 124 (420)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~ 124 (420)
+|+||.|+|... ....+..+ ++|++.||+|+..
T Consensus 83 vDvVf~atp~~~--s~~~a~~~-~aG~~VId~sa~~ 115 (359)
T 1xyg_A 83 VDAVFCCLPHGT--TQEIIKEL-PTALKIVDLSADF 115 (359)
T ss_dssp CSEEEECCCTTT--HHHHHHTS-CTTCEEEECSSTT
T ss_pred CCEEEEcCCchh--HHHHHHHH-hCCCEEEECCccc
Confidence 999999997543 36778888 9999999999864
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00023 Score=72.97 Aligned_cols=102 Identities=14% Similarity=0.320 Sum_probs=77.0
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-Hh
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CS 87 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~-~~ 87 (420)
..|+|+|.|+ |-+|+.+++.|.+++ +.|.+.++++++++++.+++ ++.++.+|.++++.|+++ ++
T Consensus 2 ~~M~iiI~G~-G~vG~~la~~L~~~~-------~~v~vId~d~~~~~~~~~~~------~~~~i~Gd~~~~~~L~~Agi~ 67 (461)
T 4g65_A 2 NAMKIIILGA-GQVGGTLAENLVGEN-------NDITIVDKDGDRLRELQDKY------DLRVVNGHASHPDVLHEAGAQ 67 (461)
T ss_dssp CCEEEEEECC-SHHHHHHHHHTCSTT-------EEEEEEESCHHHHHHHHHHS------SCEEEESCTTCHHHHHHHTTT
T ss_pred CcCEEEEECC-CHHHHHHHHHHHHCC-------CCEEEEECCHHHHHHHHHhc------CcEEEEEcCCCHHHHHhcCCC
Confidence 4689999998 899999999998887 89999999999998887766 467899999999999998 78
Q ss_pred ccCeeEeccCCCCCCcHHHH--HHHHH-cCC-cEEecCCcHHHH
Q 014694 88 QTKLLLNCVGPYRLHGDPVA--AACVH-SGC-DYLDISGEPEFM 127 (420)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv--~Ac~~-~g~-~yvdisge~~~~ 127 (420)
++|++|-+.+- ...|++ ..|.+ .+. +.+--.-.+.+.
T Consensus 68 ~ad~~ia~t~~---De~Nl~~~~~Ak~~~~~~~~iar~~~~~~~ 108 (461)
T 4g65_A 68 DADMLVAVTNT---DETNMAACQVAFTLFNTPNRIARIRSPQYL 108 (461)
T ss_dssp TCSEEEECCSC---HHHHHHHHHHHHHHHCCSSEEEECCCHHHH
T ss_pred cCCEEEEEcCC---hHHHHHHHHHHHHhcCCccceeEeccchhh
Confidence 99999976642 223433 22333 244 444444555554
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=97.47 E-value=0.0006 Score=68.85 Aligned_cols=108 Identities=14% Similarity=0.173 Sum_probs=81.7
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-Hh
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CS 87 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~-~~ 87 (420)
++++|+|+|. |.+|+.+++.|.+.+ ++|+++++++++++.+.+ .++.++.+|.++++.|+++ +.
T Consensus 3 ~~~~viIiG~-Gr~G~~va~~L~~~g-------~~vvvId~d~~~v~~~~~-------~g~~vi~GDat~~~~L~~agi~ 67 (413)
T 3l9w_A 3 HGMRVIIAGF-GRFGQITGRLLLSSG-------VKMVVLDHDPDHIETLRK-------FGMKVFYGDATRMDLLESAGAA 67 (413)
T ss_dssp -CCSEEEECC-SHHHHHHHHHHHHTT-------CCEEEEECCHHHHHHHHH-------TTCCCEESCTTCHHHHHHTTTT
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHCC-------CCEEEEECCHHHHHHHHh-------CCCeEEEcCCCCHHHHHhcCCC
Confidence 3467999997 999999999999987 789999999999877653 2467899999999999988 88
Q ss_pred ccCeeEeccCCCCCCcHHHHHHHHHcCC--cEEecCCcHHHHHHHHH
Q 014694 88 QTKLLLNCVGPYRLHGDPVAAACVHSGC--DYLDISGEPEFMERMEA 132 (420)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~Ac~~~g~--~yvdisge~~~~~~~~~ 132 (420)
++|+||.+.+.. .....++..+.+.+. +.|--+-.....+.+..
T Consensus 68 ~A~~viv~~~~~-~~n~~i~~~ar~~~p~~~Iiara~~~~~~~~L~~ 113 (413)
T 3l9w_A 68 KAEVLINAIDDP-QTNLQLTEMVKEHFPHLQIIARARDVDHYIRLRQ 113 (413)
T ss_dssp TCSEEEECCSSH-HHHHHHHHHHHHHCTTCEEEEEESSHHHHHHHHH
T ss_pred ccCEEEECCCCh-HHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHH
Confidence 999999888642 223556667777665 34444555555555543
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=97.47 E-value=0.0001 Score=71.30 Aligned_cols=33 Identities=9% Similarity=-0.055 Sum_probs=29.9
Q ss_pred ceEEEEcC--CcHHHHHHHHHHHHhCCCCCCCcceEEEEecC
Q 014694 11 FDVIILGA--SGFTGKYVVREALKLFNFPSSPIKSLALAGRN 50 (420)
Q Consensus 11 ~~IvV~GA--TG~~G~~va~~L~~~~~~~~~~~~~v~iagRs 50 (420)
..++|+|| +++||+.+++.|++++ .+|++.+|+
T Consensus 10 k~~lVTGa~~s~GIG~aia~~la~~G-------~~Vv~~~r~ 44 (319)
T 2ptg_A 10 KTAFVAGVADSNGYGWAICKLLRAAG-------ARVLVGTWP 44 (319)
T ss_dssp CEEEEECCCCTTSHHHHHHHHHHHTT-------CEEEEEECH
T ss_pred CEEEEeCCCCCCcHHHHHHHHHHHCC-------CEEEEEecc
Confidence 46999999 8999999999999998 789999875
|
| >3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A* | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00032 Score=67.52 Aligned_cols=103 Identities=17% Similarity=0.267 Sum_probs=72.1
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh------------------hHHHHHHHHhCCCCCCCc-
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP------------------TRVKQALQWASPSHSLSI- 69 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~------------------~kl~~~~~~l~~~~~~~~- 69 (420)
+..+|+|+|+ |.+|..++++|++.|- -++.+++++. .|.+.+.+.+.. ..+.+
T Consensus 35 ~~~~VlVvGa-GGlGs~va~~La~aGV------G~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~-iNP~v~ 106 (292)
T 3h8v_A 35 RTFAVAIVGV-GGVGSVTAEMLTRCGI------GKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRN-INPDVL 106 (292)
T ss_dssp GGCEEEEECC-SHHHHHHHHHHHHHTC------SEEEEECCCBC------------CCTTSBHHHHHHHHHHH-HCTTSE
T ss_pred hCCeEEEECc-CHHHHHHHHHHHHcCC------CEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHh-hCCCcE
Confidence 3458999998 7799999999999983 5788888765 455555444421 11233
Q ss_pred -cEEEEeCCCHHHHHHHH-----------hccCeeEeccCCCCCCcHHHHHHHHHcCCcEEec
Q 014694 70 -PILTADTTDPPSLHRLC-----------SQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDI 120 (420)
Q Consensus 70 -~~i~~D~~d~~sl~~~~-----------~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdi 120 (420)
..+..++++.+.++.++ +++|+||+|...+.. -..+-++|.+.++.+|+.
T Consensus 107 v~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn~~~-R~~in~~c~~~~~Pli~~ 168 (292)
T 3h8v_A 107 FEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDNFEA-RMTINTACNELGQTWMES 168 (292)
T ss_dssp EEEECCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCSSHHH-HHHHHHHHHHHTCCEEEE
T ss_pred EEEecccCCcHHHHHHHhhhhcccccccCCCCCEEEECCcchhh-hhHHHHHHHHhCCCEEEe
Confidence 34444666666677665 689999999875432 256778999999988764
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=97.46 E-value=8.4e-05 Score=71.10 Aligned_cols=34 Identities=15% Similarity=0.051 Sum_probs=30.6
Q ss_pred ceEEEEcCC--cHHHHHHHHHHHHhCCCCCCCcceEEEEecCh
Q 014694 11 FDVIILGAS--GFTGKYVVREALKLFNFPSSPIKSLALAGRNP 51 (420)
Q Consensus 11 ~~IvV~GAT--G~~G~~va~~L~~~~~~~~~~~~~v~iagRs~ 51 (420)
..++|+||+ |+||+.++++|++++ .+|++.+|+.
T Consensus 9 k~~lVTGas~~~GIG~aia~~la~~G-------~~V~~~~r~~ 44 (297)
T 1d7o_A 9 KRAFIAGIADDNGYGWAVAKSLAAAG-------AEILVGTWVP 44 (297)
T ss_dssp CEEEEECCSSSSSHHHHHHHHHHHTT-------CEEEEEEEHH
T ss_pred CEEEEECCCCCCChHHHHHHHHHHCC-------CeEEEeeccc
Confidence 469999999 999999999999998 7899998763
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00023 Score=65.73 Aligned_cols=90 Identities=13% Similarity=0.020 Sum_probs=69.6
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-Hh
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CS 87 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~-~~ 87 (420)
...+|+|+|+ |.+|+.+++.|.+.+ + |.+++|++++++.+. . ++.++.+|.+|++.++++ ++
T Consensus 8 ~~~~viI~G~-G~~G~~la~~L~~~g-------~-v~vid~~~~~~~~~~--~------~~~~i~gd~~~~~~l~~a~i~ 70 (234)
T 2aef_A 8 KSRHVVICGW-SESTLECLRELRGSE-------V-FVLAEDENVRKKVLR--S------GANFVHGDPTRVSDLEKANVR 70 (234)
T ss_dssp --CEEEEESC-CHHHHHHHHHSTTSE-------E-EEEESCGGGHHHHHH--T------TCEEEESCTTCHHHHHHTTCT
T ss_pred CCCEEEEECC-ChHHHHHHHHHHhCC-------e-EEEEECCHHHHHHHh--c------CCeEEEcCCCCHHHHHhcCcc
Confidence 3457999997 999999999998876 8 999999998876554 2 467899999999999887 88
Q ss_pred ccCeeEeccCCCCCCcHHHHHHHHHcCCc
Q 014694 88 QTKLLLNCVGPYRLHGDPVAAACVHSGCD 116 (420)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~ 116 (420)
++|.||.+.+.- .....+...|.+.+.+
T Consensus 71 ~ad~vi~~~~~d-~~n~~~~~~a~~~~~~ 98 (234)
T 2aef_A 71 GARAVIVDLESD-SETIHCILGIRKIDES 98 (234)
T ss_dssp TCSEEEECCSCH-HHHHHHHHHHHHHCSS
T ss_pred hhcEEEEcCCCc-HHHHHHHHHHHHHCCC
Confidence 999999887642 1124455667777654
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00042 Score=67.36 Aligned_cols=74 Identities=15% Similarity=0.033 Sum_probs=55.9
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
...|+|+||+|.+|..+++.+...+ .+|++.+|+.++++.+ ++++ .. ..+|..+.+++.+.+.
T Consensus 146 g~~vlV~Ga~ggiG~~~~~~~~~~G-------~~V~~~~~~~~~~~~~-~~~g------~~-~~~d~~~~~~~~~~~~~~ 210 (333)
T 1v3u_A 146 GETVLVSAAAGAVGSVVGQIAKLKG-------CKVVGAAGSDEKIAYL-KQIG------FD-AAFNYKTVNSLEEALKKA 210 (333)
T ss_dssp SCEEEEESTTBHHHHHHHHHHHHTT-------CEEEEEESSHHHHHHH-HHTT------CS-EEEETTSCSCHHHHHHHH
T ss_pred CCEEEEecCCCcHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHH-HhcC------Cc-EEEecCCHHHHHHHHHHH
Confidence 3479999999999999999998887 7899999999988766 5554 12 3458776333433332
Q ss_pred ---ccCeeEeccCC
Q 014694 88 ---QTKLLLNCVGP 98 (420)
Q Consensus 88 ---~~dvVIn~aGp 98 (420)
+.|+||||+|.
T Consensus 211 ~~~~~d~vi~~~g~ 224 (333)
T 1v3u_A 211 SPDGYDCYFDNVGG 224 (333)
T ss_dssp CTTCEEEEEESSCH
T ss_pred hCCCCeEEEECCCh
Confidence 58999999983
|
| >2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.40 E-value=8e-05 Score=73.50 Aligned_cols=99 Identities=13% Similarity=0.059 Sum_probs=63.0
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
.++|.|.||||+||+.+++.|.++. ..++..+.+..+.-+.+ .+.. ....... ...+.+.+ + +.++
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p------~~elv~v~s~~~~g~~~-~~~~-~~~~g~~--~~~~~~~~---~-~~~v 69 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSHP------YLEVKQVTSRRFAGEPV-HFVH-PNLRGRT--NLKFVPPE---K-LEPA 69 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCT------TEEEEEEBCSTTTTSBG-GGTC-GGGTTTC--CCBCBCGG---G-CCCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCC------CcEEEEEECchhhCchh-HHhC-chhcCcc--cccccchh---H-hcCC
Confidence 4789999999999999999998764 16766555433221111 1100 0000000 11222322 2 3789
Q ss_pred CeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcH
Q 014694 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEP 124 (420)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~ 124 (420)
|+||.|+|... ...++.++.++|++.||+|++.
T Consensus 70 DvV~~a~g~~~--s~~~a~~~~~aG~~VId~Sa~~ 102 (345)
T 2ozp_A 70 DILVLALPHGV--FAREFDRYSALAPVLVDLSADF 102 (345)
T ss_dssp SEEEECCCTTH--HHHTHHHHHTTCSEEEECSSTT
T ss_pred CEEEEcCCcHH--HHHHHHHHHHCCCEEEEcCccc
Confidence 99999998653 3677888999999999999863
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00016 Score=68.68 Aligned_cols=97 Identities=15% Similarity=0.206 Sum_probs=64.0
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
..+++|+|+ |.+|+.+++.|++.+ .+|.+.+|+.++++++.++++. .. .+...| .+++.+ .++
T Consensus 119 ~k~vlViGa-Gg~g~a~a~~L~~~G-------~~V~v~~R~~~~~~~la~~~~~--~~--~~~~~~---~~~~~~--~~~ 181 (271)
T 1nyt_A 119 GLRILLIGA-GGASRGVLLPLLSLD-------CAVTITNRTVSRAEELAKLFAH--TG--SIQALS---MDELEG--HEF 181 (271)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTT-------CEEEEECSSHHHHHHHHHHTGG--GS--SEEECC---SGGGTT--CCC
T ss_pred CCEEEEECC-cHHHHHHHHHHHHcC-------CEEEEEECCHHHHHHHHHHhhc--cC--CeeEec---HHHhcc--CCC
Confidence 357999998 779999999999987 6899999999999888877641 11 222233 233332 689
Q ss_pred CeeEeccCCCCCCc-HHHHHHHHHcCCcEEecCCc
Q 014694 90 KLLLNCVGPYRLHG-DPVAAACVHSGCDYLDISGE 123 (420)
Q Consensus 90 dvVIn~aGp~~~~~-~~vv~Ac~~~g~~yvdisge 123 (420)
|+||||++...... .++-..+...+..++|+.-.
T Consensus 182 DivVn~t~~~~~~~~~~i~~~~l~~~~~v~D~~y~ 216 (271)
T 1nyt_A 182 DLIINATSSGISGDIPAIPSSLIHPGIYCYDMFYQ 216 (271)
T ss_dssp SEEEECCSCGGGTCCCCCCGGGCCTTCEEEESCCC
T ss_pred CEEEECCCCCCCCCCCCCCHHHcCCCCEEEEeccC
Confidence 99999998543210 00111223345667776543
|
| >1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=97.38 E-value=0.0002 Score=70.88 Aligned_cols=101 Identities=13% Similarity=0.065 Sum_probs=63.0
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh-HHHHHHHHhCCCC-------CCCccEEEEeCCCHHH
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT-RVKQALQWASPSH-------SLSIPILTADTTDPPS 81 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~-kl~~~~~~l~~~~-------~~~~~~i~~D~~d~~s 81 (420)
.++|.|.||||++|+.+++.|.++. .+++..+.|+.. ..+.+.+..+.-. ..++.+. +. |+++
T Consensus 8 ~~kV~IiGAtG~iG~~llr~L~~~p------~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~ 78 (354)
T 1ys4_A 8 KIKVGVLGATGSVGQRFVQLLADHP------MFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVI--PT-DPKH 78 (354)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCS------SEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCE--ES-CTTS
T ss_pred cceEEEECcCCHHHHHHHHHHhcCC------CCEEEEEEcccccccccHHHhcccccccccccCceeeEEE--eC-CHHH
Confidence 3689999999999999999988764 277766654321 1111111111000 0011111 11 2222
Q ss_pred HHHHHh-ccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcH
Q 014694 82 LHRLCS-QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEP 124 (420)
Q Consensus 82 l~~~~~-~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~ 124 (420)
+.+ ++|+||-|.+... ...++..+.++|++.||.++..
T Consensus 79 ---~~~~~~DvV~~atp~~~--~~~~a~~~~~aG~~VId~s~~~ 117 (354)
T 1ys4_A 79 ---EEFEDVDIVFSALPSDL--AKKFEPEFAKEGKLIFSNASAY 117 (354)
T ss_dssp ---GGGTTCCEEEECCCHHH--HHHHHHHHHHTTCEEEECCSTT
T ss_pred ---HhcCCCCEEEECCCchH--HHHHHHHHHHCCCEEEECCchh
Confidence 335 8999999987543 3678888899999999999863
|
| >3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=97.33 E-value=0.0012 Score=62.85 Aligned_cols=105 Identities=13% Similarity=0.102 Sum_probs=67.0
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
..+++|+|+ |.+|+.++..|++.+. .+|.+++|+.++.+++.+++.. ..+...+..+ +.. .++
T Consensus 120 ~k~~lvlGa-Gg~~~aia~~L~~~G~------~~v~i~~R~~~~a~~la~~~~~-----~~~~~~~~~~---l~~--~~~ 182 (272)
T 3pwz_A 120 NRRVLLLGA-GGAVRGALLPFLQAGP------SELVIANRDMAKALALRNELDH-----SRLRISRYEA---LEG--QSF 182 (272)
T ss_dssp TSEEEEECC-SHHHHHHHHHHHHTCC------SEEEEECSCHHHHHHHHHHHCC-----TTEEEECSGG---GTT--CCC
T ss_pred CCEEEEECc-cHHHHHHHHHHHHcCC------CEEEEEeCCHHHHHHHHHHhcc-----CCeeEeeHHH---hcc--cCC
Confidence 457999998 7899999999999872 3899999999999999988751 1233334433 222 689
Q ss_pred CeeEeccCCCCCCc-HHHHHHHHHcCCcEEecCC---cHHHHHHHH
Q 014694 90 KLLLNCVGPYRLHG-DPVAAACVHSGCDYLDISG---EPEFMERME 131 (420)
Q Consensus 90 dvVIn~aGp~~~~~-~~vv~Ac~~~g~~yvdisg---e~~~~~~~~ 131 (420)
|+||||...-.... .++-......+...+|+.- +.+|++...
T Consensus 183 DivInaTp~gm~~~~~~i~~~~l~~~~~V~DlvY~P~~T~ll~~A~ 228 (272)
T 3pwz_A 183 DIVVNATSASLTADLPPLPADVLGEAALAYELAYGKGLTPFLRLAR 228 (272)
T ss_dssp SEEEECSSGGGGTCCCCCCGGGGTTCSEEEESSCSCCSCHHHHHHH
T ss_pred CEEEECCCCCCCCCCCCCCHHHhCcCCEEEEeecCCCCCHHHHHHH
Confidence 99999975321100 0111122344555677653 345555443
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00047 Score=67.76 Aligned_cols=74 Identities=11% Similarity=0.027 Sum_probs=55.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcc-eEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIK-SLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC--- 86 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~-~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~--- 86 (420)
-.|+|+||+|.+|..+++.+...+ . +|++.+|+.++++.+.++++ .. ..+|..+.+..+.+.
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~~G-------a~~Vi~~~~~~~~~~~~~~~~g------~~-~~~d~~~~~~~~~~~~~~ 227 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHFLG-------CSRVVGICGTHEKCILLTSELG------FD-AAINYKKDNVAEQLRESC 227 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTT-------CSEEEEEESCHHHHHHHHHTSC------CS-EEEETTTSCHHHHHHHHC
T ss_pred cEEEEECCCcHHHHHHHHHHHHCC-------CCeEEEEeCCHHHHHHHHHHcC------Cc-eEEecCchHHHHHHHHhc
Confidence 479999999999999999988887 6 89999999998877665464 12 345776644333332
Q ss_pred h-ccCeeEeccCC
Q 014694 87 S-QTKLLLNCVGP 98 (420)
Q Consensus 87 ~-~~dvVIn~aGp 98 (420)
. +.|+||+|+|.
T Consensus 228 ~~~~d~vi~~~G~ 240 (357)
T 2zb4_A 228 PAGVDVYFDNVGG 240 (357)
T ss_dssp TTCEEEEEESCCH
T ss_pred CCCCCEEEECCCH
Confidence 2 58999999983
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00063 Score=67.35 Aligned_cols=97 Identities=15% Similarity=0.163 Sum_probs=67.7
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
+.+|+|+|+ |.+|+.+++.+...+ .+|.+.+|+.++++.+.+... ..+ ..+..+.+++.+.++++
T Consensus 167 ~~~VlViGa-GgvG~~aa~~a~~~G-------a~V~v~dr~~~r~~~~~~~~~----~~~---~~~~~~~~~~~~~~~~~ 231 (361)
T 1pjc_A 167 PGKVVILGG-GVVGTEAAKMAVGLG-------AQVQIFDINVERLSYLETLFG----SRV---ELLYSNSAEIETAVAEA 231 (361)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHG----GGS---EEEECCHHHHHHHHHTC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCC-------CEEEEEeCCHHHHHHHHHhhC----cee---EeeeCCHHHHHHHHcCC
Confidence 358999999 999999999999887 689999999999877765432 111 12223566788888899
Q ss_pred CeeEeccCCCCC-----CcHHHHHHHHHcCCcEEecCC
Q 014694 90 KLLLNCVGPYRL-----HGDPVAAACVHSGCDYLDISG 122 (420)
Q Consensus 90 dvVIn~aGp~~~-----~~~~vv~Ac~~~g~~yvdisg 122 (420)
|+||||++.... .....++. .+.+...+|++-
T Consensus 232 DvVI~~~~~~~~~~~~li~~~~~~~-~~~g~~ivdv~~ 268 (361)
T 1pjc_A 232 DLLIGAVLVPGRRAPILVPASLVEQ-MRTGSVIVDVAV 268 (361)
T ss_dssp SEEEECCCCTTSSCCCCBCHHHHTT-SCTTCEEEETTC
T ss_pred CEEEECCCcCCCCCCeecCHHHHhh-CCCCCEEEEEec
Confidence 999999974221 12233333 234556777753
|
| >2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00027 Score=69.80 Aligned_cols=102 Identities=13% Similarity=0.091 Sum_probs=63.7
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEe-cChhHHHHHHHHhCCCC-----CCCccEEEEeCCCHHHH
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAG-RNPTRVKQALQWASPSH-----SLSIPILTADTTDPPSL 82 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iag-Rs~~kl~~~~~~l~~~~-----~~~~~~i~~D~~d~~sl 82 (420)
+.++|.|.||||++|+.+++.|.++. ..++..+. .+.+..+.+.+...... .....+...|. |++.+
T Consensus 3 ~~~kV~IiGAtG~iG~~llr~L~~~p------~~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~~ 75 (350)
T 2ep5_A 3 DKIKVSLLGSTGMVGQKMVKMLAKHP------YLELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPIVST-NYEDH 75 (350)
T ss_dssp CCEEEEEESCSSHHHHHHHHHHTTCS------SEEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBEECS-SGGGG
T ss_pred CCcEEEEECcCCHHHHHHHHHHHhCC------CcEEEEEecChhhcCCCHHHhcCcccccccccCCceeEEeeC-CHHHh
Confidence 34789999999999999999887763 26776654 22121111211111000 00012222333 44332
Q ss_pred HHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCc
Q 014694 83 HRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGE 123 (420)
Q Consensus 83 ~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge 123 (420)
+++|+||-|.|.+. ...++.++.++|++.||.++.
T Consensus 76 ----~~vDvVf~atp~~~--s~~~a~~~~~aG~~VId~s~~ 110 (350)
T 2ep5_A 76 ----KDVDVVLSALPNEL--AESIELELVKNGKIVVSNASP 110 (350)
T ss_dssp ----TTCSEEEECCCHHH--HHHHHHHHHHTTCEEEECSST
T ss_pred ----cCCCEEEECCChHH--HHHHHHHHHHCCCEEEECCcc
Confidence 68999998887543 467889999999999999976
|
| >3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00042 Score=68.02 Aligned_cols=99 Identities=15% Similarity=0.272 Sum_probs=63.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh---h---HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP---T---RVKQALQWASPSHSLSIPILTADTTDPPSLHR 84 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~---~---kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~ 84 (420)
++|.|.||||++|+.+++.|.++.. +++..+.++. + ++.++...+. ...+..+... .|.+ +
T Consensus 5 ~kv~IvGatG~vG~~l~~~L~~~p~------~el~~l~s~~~~~saGk~~~~~~p~~~--~~~~~~v~~~--~~~~---~ 71 (337)
T 3dr3_A 5 LNTLIVGASGYAGAELVTYVNRHPH------MNITALTVSAQSNDAGKLISDLHPQLK--GIVELPLQPM--SDIS---E 71 (337)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTT------EEEEEEEEETTCTTTTSBHHHHCGGGT--TTCCCBEEEE--SSGG---G
T ss_pred eEEEEECCCChHHHHHHHHHHhCCC------CcEEEEEecCchhhcCCchHHhCcccc--CccceeEecc--CCHH---H
Confidence 6899999999999999999888641 6665554332 2 2332222221 0112333322 1222 2
Q ss_pred HHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcH
Q 014694 85 LCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEP 124 (420)
Q Consensus 85 ~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~ 124 (420)
+++++|+||-|.+... ....+..+.+.|+..||+|+..
T Consensus 72 ~~~~~Dvvf~a~p~~~--s~~~~~~~~~~g~~vIDlSa~f 109 (337)
T 3dr3_A 72 FSPGVDVVFLATAHEV--SHDLAPQFLEAGCVVFDLSGAF 109 (337)
T ss_dssp TCTTCSEEEECSCHHH--HHHHHHHHHHTTCEEEECSSTT
T ss_pred HhcCCCEEEECCChHH--HHHHHHHHHHCCCEEEEcCCcc
Confidence 3368999999887432 3677888899999999999874
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00032 Score=74.26 Aligned_cols=79 Identities=16% Similarity=0.111 Sum_probs=52.6
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeC-CCHHHHHH-H---H
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADT-TDPPSLHR-L---C 86 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~-~d~~sl~~-~---~ 86 (420)
.++||||++.||+.+++.|+++| .+|++.+|+. ++++.+++.. ...++..+.+|+ .+.+.+.+ + +
T Consensus 324 valVTGas~GIG~a~A~~la~~G-------a~Vv~~~~~~--~~~~~~~i~~-~g~~~~~~~~Dv~~~~~~~~~~~~~~~ 393 (604)
T 2et6_A 324 VVLITGAGAGLGKEYAKWFAKYG-------AKVVVNDFKD--ATKTVDEIKA-AGGEAWPDQHDVAKDSEAIIKNVIDKY 393 (604)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTT-------CEEEEECSSC--CHHHHHHHHH-TTCEEEEECCCHHHHHHHHHHHHHHHH
T ss_pred eEEEECcchHHHHHHHHHHHHCC-------CEEEEEeCcc--HHHHHHHHHh-cCCeEEEEEcChHHHHHHHHHHHHHhc
Confidence 58999999999999999999998 7899988632 2233333311 122344556676 44443322 2 2
Q ss_pred hccCeeEeccCCCC
Q 014694 87 SQTKLLLNCVGPYR 100 (420)
Q Consensus 87 ~~~dvVIn~aGp~~ 100 (420)
.+.|++||+||...
T Consensus 394 G~iDiLVnNAGi~~ 407 (604)
T 2et6_A 394 GTIDILVNNAGILR 407 (604)
T ss_dssp SCCCEEEECCCCCC
T ss_pred CCCCEEEECCCCCC
Confidence 36899999999643
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00022 Score=86.70 Aligned_cols=81 Identities=14% Similarity=0.074 Sum_probs=62.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcce-EEEEecChhHH---HHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKS-LALAGRNPTRV---KQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~-v~iagRs~~kl---~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
..++|+||+|.+|+.+++.|+++| .+ |++.+|+..+. ++..+++.. ...++.++.+|++|.+++++++
T Consensus 1885 k~~lITGgs~GIG~aia~~la~~G-------a~~vvl~~R~~~~~~~~~~~~~~l~~-~g~~v~~~~~Dvsd~~~v~~~~ 1956 (2512)
T 2vz8_A 1885 KSYVITGGLGGFGLQLAQWLRLRG-------AQKLVLTSRSGIRTGYQARQVREWRR-QGVQVLVSTSNASSLDGARSLI 1956 (2512)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-------CCEEEEECSSCCCSHHHHHHHHHHHH-TTCEEEEECCCSSSHHHHHHHH
T ss_pred CEEEEECCCCCHHHHHHHHHHHCC-------CCEEEEEeCCCcchHHHHHHHHHHHh-CCCEEEEEecCCCCHHHHHHHH
Confidence 469999999999999999999998 54 88889986443 333443321 1345677889999999999887
Q ss_pred h------ccCeeEeccCCC
Q 014694 87 S------QTKLLLNCVGPY 99 (420)
Q Consensus 87 ~------~~dvVIn~aGp~ 99 (420)
+ ..|+|||+||..
T Consensus 1957 ~~~~~~g~id~lVnnAgv~ 1975 (2512)
T 2vz8_A 1957 TEATQLGPVGGVFNLAMVL 1975 (2512)
T ss_dssp HHHHHHSCEEEEEECCCC-
T ss_pred HHHHhcCCCcEEEECCCcC
Confidence 6 479999999964
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=97.24 E-value=0.0005 Score=67.08 Aligned_cols=75 Identities=15% Similarity=0.041 Sum_probs=55.2
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH---
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC--- 86 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~--- 86 (420)
...|+|+||+|.+|..+++.+...+ .+|++.+|+.++++.+.++++ .. ..+|..+.+++.+.+
T Consensus 156 g~~vlI~Ga~g~iG~~~~~~a~~~G-------~~V~~~~~~~~~~~~~~~~~g------~~-~~~d~~~~~~~~~~~~~~ 221 (345)
T 2j3h_A 156 GETVYVSAASGAVGQLVGQLAKMMG-------CYVVGSAGSKEKVDLLKTKFG------FD-DAFNYKEESDLTAALKRC 221 (345)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTT-------CEEEEEESSHHHHHHHHHTSC------CS-EEEETTSCSCSHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHcC------Cc-eEEecCCHHHHHHHHHHH
Confidence 3479999999999999999988877 789999999999876654554 12 234766543333332
Q ss_pred --hccCeeEeccCC
Q 014694 87 --SQTKLLLNCVGP 98 (420)
Q Consensus 87 --~~~dvVIn~aGp 98 (420)
.+.|+||+|+|.
T Consensus 222 ~~~~~d~vi~~~g~ 235 (345)
T 2j3h_A 222 FPNGIDIYFENVGG 235 (345)
T ss_dssp CTTCEEEEEESSCH
T ss_pred hCCCCcEEEECCCH
Confidence 258999999983
|
| >1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A* | Back alignment and structure |
|---|
Probab=97.24 E-value=0.0005 Score=65.29 Aligned_cols=97 Identities=24% Similarity=0.253 Sum_probs=64.5
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
..+++|+|+ |.+|+.++..|++.+ .+|.+.+|+.++++++.++++. .. .+...|+ +++.+ .++
T Consensus 119 ~~~vlvlGa-Gg~g~a~a~~L~~~G-------~~v~v~~R~~~~a~~l~~~~~~--~~--~~~~~~~---~~~~~--~~~ 181 (272)
T 1p77_A 119 NQHVLILGA-GGATKGVLLPLLQAQ-------QNIVLANRTFSKTKELAERFQP--YG--NIQAVSM---DSIPL--QTY 181 (272)
T ss_dssp TCEEEEECC-SHHHHTTHHHHHHTT-------CEEEEEESSHHHHHHHHHHHGG--GS--CEEEEEG---GGCCC--SCC
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHccc--cC--CeEEeeH---HHhcc--CCC
Confidence 357999998 789999999999987 6899999999999888877641 01 2223343 22211 489
Q ss_pred CeeEeccCCCCCCcH-HHHHHHHHcCCcEEecCCc
Q 014694 90 KLLLNCVGPYRLHGD-PVAAACVHSGCDYLDISGE 123 (420)
Q Consensus 90 dvVIn~aGp~~~~~~-~vv~Ac~~~g~~yvdisge 123 (420)
|+||||++....... ++-..+...+...+|++-.
T Consensus 182 DivIn~t~~~~~~~~~~i~~~~l~~~~~v~D~~y~ 216 (272)
T 1p77_A 182 DLVINATSAGLSGGTASVDAEILKLGSAFYDMQYA 216 (272)
T ss_dssp SEEEECCCC-------CCCHHHHHHCSCEEESCCC
T ss_pred CEEEECCCCCCCCCCCCCCHHHcCCCCEEEEeeCC
Confidence 999999985432110 1223445667778887653
|
| >1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* | Back alignment and structure |
|---|
Probab=97.24 E-value=0.0029 Score=61.36 Aligned_cols=107 Identities=19% Similarity=0.076 Sum_probs=66.4
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
|+|+|+||+|++|..++..|+..+- ..++.+.++++ .+....++.. ...... +..- ....++++.++++|
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~-----~~ev~L~Di~~--~~~~a~dL~~-~~~~~~-l~~~-~~t~d~~~a~~~aD 70 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPL-----VSRLTLYDIAH--TPGVAADLSH-IETRAT-VKGY-LGPEQLPDCLKGCD 70 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTT-----CSEEEEEESSS--HHHHHHHHTT-SSSSCE-EEEE-ESGGGHHHHHTTCS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC-----CcEEEEEeCCc--cHHHHHHHhc-cCcCce-EEEe-cCCCCHHHHhCCCC
Confidence 5899999999999999999887651 14799999987 3334445532 111111 1110 01245777899999
Q ss_pred eeEeccCCCCCCc--------------HHHHHHHHHcCC--cEEecCCcHHHH
Q 014694 91 LLLNCVGPYRLHG--------------DPVAAACVHSGC--DYLDISGEPEFM 127 (420)
Q Consensus 91 vVIn~aGp~~~~~--------------~~vv~Ac~~~g~--~yvdisge~~~~ 127 (420)
+||+++|.....+ ..+++++.+..- .++.+|-....+
T Consensus 71 vVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sNPv~~~ 123 (314)
T 1mld_A 71 VVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNPVNST 123 (314)
T ss_dssp EEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSCHHHH
T ss_pred EEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCCcchh
Confidence 9999999655433 334445555443 455565544444
|
| >2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00027 Score=69.49 Aligned_cols=95 Identities=19% Similarity=0.193 Sum_probs=61.2
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEE-ecC-hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA-GRN-PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~ia-gRs-~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
.++|.|.||||+||+.+++.|.+++.+ ...+..+ +|+ ..+. + .+. +..+...|. |++. ++
T Consensus 6 ~~kV~IiGAtG~iG~~llr~L~~~~~~----~~elv~i~s~~~~g~~--~--~~~-----g~~i~~~~~-~~~~----~~ 67 (340)
T 2hjs_A 6 PLNVAVVGATGSVGEALVGLLDERDFP----LHRLHLLASAESAGQR--M--GFA-----ESSLRVGDV-DSFD----FS 67 (340)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCC----CSCEEEEECTTTTTCE--E--EET-----TEEEECEEG-GGCC----GG
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCC----cEEEEEEecCCCCCCc--c--ccC-----CcceEEecC-CHHH----hc
Confidence 478999999999999999999865421 1455443 432 2110 0 010 112111222 2222 46
Q ss_pred ccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcH
Q 014694 88 QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEP 124 (420)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~ 124 (420)
++|+||.|.|.+. ....+.++.++|++.||+|+..
T Consensus 68 ~~DvV~~a~g~~~--s~~~a~~~~~aG~kvId~Sa~~ 102 (340)
T 2hjs_A 68 SVGLAFFAAAAEV--SRAHAERARAAGCSVIDLSGAL 102 (340)
T ss_dssp GCSEEEECSCHHH--HHHHHHHHHHTTCEEEETTCTT
T ss_pred CCCEEEEcCCcHH--HHHHHHHHHHCCCEEEEeCCCC
Confidence 8999999998643 4678888999999999999764
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=97.22 E-value=0.0012 Score=65.75 Aligned_cols=81 Identities=12% Similarity=0.030 Sum_probs=60.9
Q ss_pred CCcceEEEEcCCcHHHHHHHHHHH-HhCCCCCCCcceEEEEecChhH---------------HHHHHHHhCCCCCCCccE
Q 014694 8 PELFDVIILGASGFTGKYVVREAL-KLFNFPSSPIKSLALAGRNPTR---------------VKQALQWASPSHSLSIPI 71 (420)
Q Consensus 8 ~~~~~IvV~GATG~~G~~va~~L~-~~~~~~~~~~~~v~iagRs~~k---------------l~~~~~~l~~~~~~~~~~ 71 (420)
..+.++||+||+..+|..++..|+ +.+ ..++++.|+.+. ..+..++. ..+...
T Consensus 48 ~~pK~vLVtGaSsGiGlA~AialAf~~G-------A~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~----G~~a~~ 116 (401)
T 4ggo_A 48 KAPKNVLVLGCSNGYGLASRITAAFGYG-------AATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKRE----GLYSVT 116 (401)
T ss_dssp CCCCEEEEESCSSHHHHHHHHHHHHHHC-------CEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHH----TCCEEE
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHhhCC-------CCEEEEecCCcccccccccccchhHHHHHHHHHHc----CCCcee
Confidence 346689999999999999999998 566 567777764321 12223333 346778
Q ss_pred EEEeCCCHHHHHHHHh-------ccCeeEeccCCC
Q 014694 72 LTADTTDPPSLHRLCS-------QTKLLLNCVGPY 99 (420)
Q Consensus 72 i~~D~~d~~sl~~~~~-------~~dvVIn~aGp~ 99 (420)
+.||+.|+++++++++ +.|+|||+++..
T Consensus 117 i~~Dv~d~e~i~~vi~~i~~~~G~IDiLVhS~A~~ 151 (401)
T 4ggo_A 117 IDGDAFSDEIKAQVIEEAKKKGIKFDLIVYSLASP 151 (401)
T ss_dssp EESCTTSHHHHHHHHHHHHHTTCCEEEEEECCCCS
T ss_pred EeCCCCCHHHHHHHHHHHHHhcCCCCEEEEecccc
Confidence 9999999999999886 579999999853
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=97.22 E-value=0.00086 Score=65.19 Aligned_cols=76 Identities=14% Similarity=0.047 Sum_probs=56.8
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
..-+|+|+||+|.+|..+++.+...+ .+|++.+|++++++.+.++++ .. ...|..+.+..+.+.+
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~~~G-------a~Vi~~~~~~~~~~~~~~~~g------~~-~~~~~~~~~~~~~~~~~ 214 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIARLKG-------CRVVGIAGGAEKCRFLVEELG------FD-GAIDYKNEDLAAGLKRE 214 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTT-------CEEEEEESSHHHHHHHHHTTC------CS-EEEETTTSCHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHcC------CC-EEEECCCHHHHHHHHHh
Confidence 34479999999999999999988877 799999999999877656664 12 2356666444333332
Q ss_pred ---ccCeeEeccCC
Q 014694 88 ---QTKLLLNCVGP 98 (420)
Q Consensus 88 ---~~dvVIn~aGp 98 (420)
+.|+||+|+|.
T Consensus 215 ~~~~~d~vi~~~g~ 228 (336)
T 4b7c_A 215 CPKGIDVFFDNVGG 228 (336)
T ss_dssp CTTCEEEEEESSCH
T ss_pred cCCCceEEEECCCc
Confidence 58999999983
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.21 E-value=0.00072 Score=65.51 Aligned_cols=74 Identities=18% Similarity=0.114 Sum_probs=55.7
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
.-.|+|+||+|.+|..+++.+...+ .+|++.+|++++++.+. +++ .. ..+|..+.+..+++.+
T Consensus 141 g~~vlV~Ga~ggiG~~~~~~a~~~G-------~~V~~~~~~~~~~~~~~-~~g------~~-~~~~~~~~~~~~~~~~~~ 205 (327)
T 1qor_A 141 DEQFLFHAAAGGVGLIACQWAKALG-------AKLIGTVGTAQKAQSAL-KAG------AW-QVINYREEDLVERLKEIT 205 (327)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHHT-------CEEEEEESSHHHHHHHH-HHT------CS-EEEETTTSCHHHHHHHHT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHH-HcC------CC-EEEECCCccHHHHHHHHh
Confidence 3479999999999999999998887 78999999998886554 353 12 2357766554444432
Q ss_pred ---ccCeeEeccCC
Q 014694 88 ---QTKLLLNCVGP 98 (420)
Q Consensus 88 ---~~dvVIn~aGp 98 (420)
+.|+||||+|+
T Consensus 206 ~~~~~D~vi~~~g~ 219 (327)
T 1qor_A 206 GGKKVRVVYDSVGR 219 (327)
T ss_dssp TTCCEEEEEECSCG
T ss_pred CCCCceEEEECCch
Confidence 58999999993
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.20 E-value=0.0008 Score=65.86 Aligned_cols=74 Identities=15% Similarity=-0.006 Sum_probs=55.2
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..+|+|+||+|.+|..+++.+...+ .+|++.+|+.++++. +++++ .. ...|+.+.+++.+.+.
T Consensus 170 g~~vlV~Ga~ggiG~~~~~~a~~~G-------a~V~~~~~~~~~~~~-~~~~g------~~-~~~d~~~~~~~~~~~~~~ 234 (347)
T 2hcy_A 170 GHWVAISGAAGGLGSLAVQYAKAMG-------YRVLGIDGGEGKEEL-FRSIG------GE-VFIDFTKEKDIVGAVLKA 234 (347)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEECSTTHHHH-HHHTT------CC-EEEETTTCSCHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CcEEEEcCCHHHHHH-HHHcC------Cc-eEEecCccHhHHHHHHHH
Confidence 3479999999999999999988877 789999999988854 44553 12 3358775444444443
Q ss_pred ---ccCeeEeccCC
Q 014694 88 ---QTKLLLNCVGP 98 (420)
Q Consensus 88 ---~~dvVIn~aGp 98 (420)
+.|+||+++|.
T Consensus 235 ~~~~~D~vi~~~g~ 248 (347)
T 2hcy_A 235 TDGGAHGVINVSVS 248 (347)
T ss_dssp HTSCEEEEEECSSC
T ss_pred hCCCCCEEEECCCc
Confidence 58999999983
|
| >1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00052 Score=64.48 Aligned_cols=102 Identities=17% Similarity=0.201 Sum_probs=69.6
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh-------------------hHHHHHHHHhCCCCCCCcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-------------------TRVKQALQWASPSHSLSIP 70 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~-------------------~kl~~~~~~l~~~~~~~~~ 70 (420)
..+|+|+|+ |.+|..++++|++.|- -++.+++++. .|.+.+.+.+.. ..+.++
T Consensus 28 ~~~VlvvG~-GglG~~va~~La~~Gv------g~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~-~np~~~ 99 (251)
T 1zud_1 28 DSQVLIIGL-GGLGTPAALYLAGAGV------GTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQ-LNPDIQ 99 (251)
T ss_dssp TCEEEEECC-STTHHHHHHHHHHTTC------SEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHH-HCTTSE
T ss_pred cCcEEEEcc-CHHHHHHHHHHHHcCC------CeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHH-HCCCCE
Confidence 357999998 5599999999999983 4788886542 566555555431 112344
Q ss_pred EEEEeC-CCHHHHHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEec
Q 014694 71 ILTADT-TDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDI 120 (420)
Q Consensus 71 ~i~~D~-~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdi 120 (420)
+...+. -+.+.+.++++++|+||+|...+. .-..+-++|.+.++.+|+.
T Consensus 100 v~~~~~~~~~~~~~~~~~~~DvVi~~~d~~~-~r~~l~~~~~~~~~p~i~~ 149 (251)
T 1zud_1 100 LTALQQRLTGEALKDAVARADVVLDCTDNMA-TRQEINAACVALNTPLITA 149 (251)
T ss_dssp EEEECSCCCHHHHHHHHHHCSEEEECCSSHH-HHHHHHHHHHHTTCCEEEE
T ss_pred EEEEeccCCHHHHHHHHhcCCEEEECCCCHH-HHHHHHHHHHHhCCCEEEE
Confidence 433321 245678889999999999986432 2356678888888877775
|
| >1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A* | Back alignment and structure |
|---|
Probab=97.19 E-value=0.00012 Score=69.97 Aligned_cols=97 Identities=19% Similarity=0.155 Sum_probs=60.8
Q ss_pred CCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEE-EEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHH
Q 014694 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLA-LAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 8 ~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~-iagRs~~kl~~~~~~l~~~-~~~~~~~i~~D~~d~~sl~~~ 85 (420)
.++++|.|+|++|.+|+.+++.+.+... +++. +++|+.+++. .+.+... ......+.. .++++++
T Consensus 3 ~~~mkV~V~Ga~G~mG~~~~~~~~~~~~------~elva~~d~~~~~~~--g~d~~~~~g~~~~~v~~-----~~dl~~~ 69 (273)
T 1dih_A 3 DANIRVAIAGAGGRMGRQLIQAALALEG------VQLGAALEREGSSLL--GSDAGELAGAGKTGVTV-----QSSLDAV 69 (273)
T ss_dssp CCBEEEEETTTTSHHHHHHHHHHHHSTT------EECCCEECCTTCTTC--SCCTTCSSSSSCCSCCE-----ESCSTTT
T ss_pred CCCcEEEEECCCCHHHHHHHHHHHhCCC------CEEEEEEecCchhhh--hhhHHHHcCCCcCCcee-----cCCHHHH
Confidence 3568999999999999999999886541 5664 6667654320 0001000 000111111 1223345
Q ss_pred HhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEe
Q 014694 86 CSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLD 119 (420)
Q Consensus 86 ~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvd 119 (420)
++++|+||.++.|.. ...++++|.++|+|.|-
T Consensus 70 l~~~DvVIDft~p~~--~~~~~~~a~~~G~~vVi 101 (273)
T 1dih_A 70 KDDFDVFIDFTRPEG--TLNHLAFCRQHGKGMVI 101 (273)
T ss_dssp TTSCSEEEECSCHHH--HHHHHHHHHHTTCEEEE
T ss_pred hcCCCEEEEcCChHH--HHHHHHHHHhCCCCEEE
Confidence 568999998887753 36788999999999666
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.18 E-value=0.00095 Score=65.60 Aligned_cols=74 Identities=11% Similarity=0.053 Sum_probs=55.3
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH---H
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL---C 86 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~---~ 86 (420)
.-.|+|+||+|.+|..+++.+...+ .+|++.+|++++++ .+++++ .. ..+|..+.+..+++ .
T Consensus 171 g~~vlV~GasggiG~~~~~~a~~~G-------a~Vi~~~~~~~~~~-~~~~~g------a~-~~~d~~~~~~~~~~~~~~ 235 (351)
T 1yb5_A 171 GESVLVHGASGGVGLAACQIARAYG-------LKILGTAGTEEGQK-IVLQNG------AH-EVFNHREVNYIDKIKKYV 235 (351)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTT-------CEEEEEESSHHHHH-HHHHTT------CS-EEEETTSTTHHHHHHHHH
T ss_pred cCEEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCChhHHH-HHHHcC------CC-EEEeCCCchHHHHHHHHc
Confidence 3479999999999999999988877 78999999999886 445554 12 23577665443333 3
Q ss_pred h--ccCeeEeccCC
Q 014694 87 S--QTKLLLNCVGP 98 (420)
Q Consensus 87 ~--~~dvVIn~aGp 98 (420)
. +.|+||+|+|.
T Consensus 236 ~~~~~D~vi~~~G~ 249 (351)
T 1yb5_A 236 GEKGIDIIIEMLAN 249 (351)
T ss_dssp CTTCEEEEEESCHH
T ss_pred CCCCcEEEEECCCh
Confidence 2 58999999984
|
| >1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 | Back alignment and structure |
|---|
Probab=97.16 E-value=0.0027 Score=63.77 Aligned_cols=93 Identities=15% Similarity=0.067 Sum_probs=67.0
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcc-eEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIK-SLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~-~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
..+|+|+|+ |.+|+.+++.|...+ . +|.+++|+.++++++.++++ .. .. +.+++.+.+.+
T Consensus 167 g~~VlIiGa-G~iG~~~a~~l~~~G-------~~~V~v~~r~~~ra~~la~~~g------~~--~~---~~~~l~~~l~~ 227 (404)
T 1gpj_A 167 DKTVLVVGA-GEMGKTVAKSLVDRG-------VRAVLVANRTYERAVELARDLG------GE--AV---RFDELVDHLAR 227 (404)
T ss_dssp TCEEEEESC-CHHHHHHHHHHHHHC-------CSEEEEECSSHHHHHHHHHHHT------CE--EC---CGGGHHHHHHT
T ss_pred CCEEEEECh-HHHHHHHHHHHHHCC-------CCEEEEEeCCHHHHHHHHHHcC------Cc--ee---cHHhHHHHhcC
Confidence 457999998 999999999999887 5 89999999999877777774 11 12 23457778889
Q ss_pred cCeeEeccCCCCC-CcHHHHHH-HHH----cCCcEEecC
Q 014694 89 TKLLLNCVGPYRL-HGDPVAAA-CVH----SGCDYLDIS 121 (420)
Q Consensus 89 ~dvVIn~aGp~~~-~~~~vv~A-c~~----~g~~yvdis 121 (420)
+|+||+|+|.... .....++. +.+ .+.-.+|++
T Consensus 228 aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia 266 (404)
T 1gpj_A 228 SDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIA 266 (404)
T ss_dssp CSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECC
T ss_pred CCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEcc
Confidence 9999999875432 23455555 432 223477775
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=97.14 E-value=0.0017 Score=59.96 Aligned_cols=71 Identities=13% Similarity=0.201 Sum_probs=53.3
Q ss_pred cceEEEEcC----------------CcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEE
Q 014694 10 LFDVIILGA----------------SGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILT 73 (420)
Q Consensus 10 ~~~IvV~GA----------------TG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~ 73 (420)
...|+|+|| ||.+|..++++++++| .+|++.+|+.. + . ... ....
T Consensus 8 gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~G-------a~V~l~~~~~~-l-------~--~~~--g~~~ 68 (226)
T 1u7z_A 8 HLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRG-------ANVTLVSGPVS-L-------P--TPP--FVKR 68 (226)
T ss_dssp TCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTT-------CEEEEEECSCC-C-------C--CCT--TEEE
T ss_pred CCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCC-------CEEEEEECCcc-c-------c--cCC--CCeE
Confidence 357999999 7999999999999998 78988887642 1 1 011 2346
Q ss_pred EeCCCHHHHHHHH----hccCeeEeccCCC
Q 014694 74 ADTTDPPSLHRLC----SQTKLLLNCVGPY 99 (420)
Q Consensus 74 ~D~~d~~sl~~~~----~~~dvVIn~aGp~ 99 (420)
+|+.+.+++.+.+ .++|++||+||..
T Consensus 69 ~dv~~~~~~~~~v~~~~~~~Dili~~Aav~ 98 (226)
T 1u7z_A 69 VDVMTALEMEAAVNASVQQQNIFIGCAAVA 98 (226)
T ss_dssp EECCSHHHHHHHHHHHGGGCSEEEECCBCC
T ss_pred EccCcHHHHHHHHHHhcCCCCEEEECCccc
Confidence 7888876655543 4789999999964
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=97.14 E-value=0.00092 Score=65.68 Aligned_cols=74 Identities=11% Similarity=0.046 Sum_probs=55.8
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH---H
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL---C 86 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~---~ 86 (420)
.-.|+|+||+|.+|..+++.+...+ .+|++.+|++++++.+ ++++ .. ..+|..+.+..+++ .
T Consensus 163 g~~vlV~Ga~ggiG~~~~~~a~~~G-------a~Vi~~~~~~~~~~~~-~~~g------~~-~~~~~~~~~~~~~~~~~~ 227 (354)
T 2j8z_A 163 GDYVLIHAGLSGVGTAAIQLTRMAG-------AIPLVTAGSQKKLQMA-EKLG------AA-AGFNYKKEDFSEATLKFT 227 (354)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHH-HHHT------CS-EEEETTTSCHHHHHHHHT
T ss_pred CCEEEEECCccHHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHH-HHcC------Cc-EEEecCChHHHHHHHHHh
Confidence 3479999999999999999988877 7899999999998665 5554 12 34577665443333 3
Q ss_pred h--ccCeeEeccCC
Q 014694 87 S--QTKLLLNCVGP 98 (420)
Q Consensus 87 ~--~~dvVIn~aGp 98 (420)
. +.|+||+|+|.
T Consensus 228 ~~~~~d~vi~~~G~ 241 (354)
T 2j8z_A 228 KGAGVNLILDCIGG 241 (354)
T ss_dssp TTSCEEEEEESSCG
T ss_pred cCCCceEEEECCCc
Confidence 2 58999999985
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=97.14 E-value=0.0012 Score=65.65 Aligned_cols=97 Identities=20% Similarity=0.194 Sum_probs=69.4
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
+..+|+|+|+ |.+|+.+++.+...+ .+|.+.+|+.++++.+.+.++ ..+ ..+..+.+++.+.+++
T Consensus 167 ~g~~V~ViG~-G~iG~~~a~~a~~~G-------a~V~~~d~~~~~l~~~~~~~g----~~~---~~~~~~~~~l~~~l~~ 231 (377)
T 2vhw_A 167 EPADVVVIGA-GTAGYNAARIANGMG-------ATVTVLDINIDKLRQLDAEFC----GRI---HTRYSSAYELEGAVKR 231 (377)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHTT----TSS---EEEECCHHHHHHHHHH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCC-------CEEEEEeCCHHHHHHHHHhcC----Cee---EeccCCHHHHHHHHcC
Confidence 3457999998 999999999998887 789999999999877665554 122 2344566788899999
Q ss_pred cCeeEeccCCCCC-----CcHHHHHHHHHcCCcEEecC
Q 014694 89 TKLLLNCVGPYRL-----HGDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 89 ~dvVIn~aGp~~~-----~~~~vv~Ac~~~g~~yvdis 121 (420)
+|+||+|++.... .....++.+ +.|...||++
T Consensus 232 aDvVi~~~~~p~~~t~~li~~~~l~~m-k~g~~iV~va 268 (377)
T 2vhw_A 232 ADLVIGAVLVPGAKAPKLVSNSLVAHM-KPGAVLVDIA 268 (377)
T ss_dssp CSEEEECCCCTTSCCCCCBCHHHHTTS-CTTCEEEEGG
T ss_pred CCEEEECCCcCCCCCcceecHHHHhcC-CCCcEEEEEe
Confidence 9999999873211 123334332 3455677776
|
| >3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* | Back alignment and structure |
|---|
Probab=97.14 E-value=0.0014 Score=62.67 Aligned_cols=72 Identities=14% Similarity=0.199 Sum_probs=53.1
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
..+++|+|+ |.+|+.++..|++.+. .+|.+.+|+.++.+++.+++.. .. .+...+..+ + ..++
T Consensus 126 ~k~vlvlGa-Gg~g~aia~~L~~~G~------~~v~v~~R~~~~a~~la~~~~~--~~--~~~~~~~~~---l---~~~a 188 (281)
T 3o8q_A 126 GATILLIGA-GGAARGVLKPLLDQQP------ASITVTNRTFAKAEQLAELVAA--YG--EVKAQAFEQ---L---KQSY 188 (281)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHTTCC------SEEEEEESSHHHHHHHHHHHGG--GS--CEEEEEGGG---C---CSCE
T ss_pred CCEEEEECc-hHHHHHHHHHHHhcCC------CeEEEEECCHHHHHHHHHHhhc--cC--CeeEeeHHH---h---cCCC
Confidence 457999998 7899999999999872 3899999999999998887741 11 222333322 2 1689
Q ss_pred CeeEeccCC
Q 014694 90 KLLLNCVGP 98 (420)
Q Consensus 90 dvVIn~aGp 98 (420)
|+||||...
T Consensus 189 DiIInaTp~ 197 (281)
T 3o8q_A 189 DVIINSTSA 197 (281)
T ss_dssp EEEEECSCC
T ss_pred CEEEEcCcC
Confidence 999999853
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=97.11 E-value=0.0017 Score=60.17 Aligned_cols=73 Identities=11% Similarity=0.139 Sum_probs=52.9
Q ss_pred cceEEEEcC----------------CcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEE
Q 014694 10 LFDVIILGA----------------SGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILT 73 (420)
Q Consensus 10 ~~~IvV~GA----------------TG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~ 73 (420)
.++|+|+|| ||.+|..++++++++| .+|++.+|+.+.. ......+..
T Consensus 3 gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~G-------a~V~lv~~~~~~~----------~~~~~~~~~ 65 (232)
T 2gk4_A 3 AMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAG-------YEVCLITTKRALK----------PEPHPNLSI 65 (232)
T ss_dssp CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTT-------CEEEEEECTTSCC----------CCCCTTEEE
T ss_pred CCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCC-------CEEEEEeCCcccc----------ccCCCCeEE
Confidence 458999999 9999999999999998 8999999875311 000112445
Q ss_pred EeCCCHHHHHH----HHhccCeeEeccCCC
Q 014694 74 ADTTDPPSLHR----LCSQTKLLLNCVGPY 99 (420)
Q Consensus 74 ~D~~d~~sl~~----~~~~~dvVIn~aGp~ 99 (420)
.|+...+++.. .+.++|++||+||..
T Consensus 66 ~~v~s~~em~~~v~~~~~~~Dili~aAAvs 95 (232)
T 2gk4_A 66 REITNTKDLLIEMQERVQDYQVLIHSMAVS 95 (232)
T ss_dssp EECCSHHHHHHHHHHHGGGCSEEEECSBCC
T ss_pred EEHhHHHHHHHHHHHhcCCCCEEEEcCccc
Confidence 56666544433 445799999999964
|
| >4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A* | Back alignment and structure |
|---|
Probab=97.10 E-value=0.00043 Score=68.55 Aligned_cols=103 Identities=19% Similarity=0.283 Sum_probs=63.5
Q ss_pred CCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEE-EecCh--hHHHHHHHHhCCCCC----CCccEEEEeCCCHH
Q 014694 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLAL-AGRNP--TRVKQALQWASPSHS----LSIPILTADTTDPP 80 (420)
Q Consensus 8 ~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~i-agRs~--~kl~~~~~~l~~~~~----~~~~~i~~D~~d~~ 80 (420)
+++++|-|.|||||+|+.+++.|.++. ..++.. +.++. .++.........+.. .+..+. +. +++
T Consensus 5 ~~~~kVaIvGATGyvG~eLlrlL~~hP------~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~--~~-~~~ 75 (359)
T 4dpk_A 5 RRTLKAAILGATGLVGIEYVRMLSNHP------YIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIK--PT-DPK 75 (359)
T ss_dssp -CCEEEEETTTTSTTHHHHHHHHTTCS------SEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCE--EC-CGG
T ss_pred CCCCeEEEECCCCHHHHHHHHHHHhCC------CceEEEEECchhcCCChhHhcccccccccccccccceEE--eC-CHH
Confidence 456899999999999999999777653 156544 44433 223221000000000 022222 22 333
Q ss_pred HHHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHH
Q 014694 81 SLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPE 125 (420)
Q Consensus 81 sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~ 125 (420)
+ +.++|+||.|.+-.. ...++..+.+.|+..||+|+...
T Consensus 76 ~----~~~vDvvf~a~p~~~--s~~~a~~~~~~G~~vIDlSa~~R 114 (359)
T 4dpk_A 76 L----MDDVDIIFSPLPQGA--AGPVEEQFAKEGFPVISNSPDHR 114 (359)
T ss_dssp G----CTTCCEEEECCCTTT--HHHHHHHHHHTTCEEEECSSTTT
T ss_pred H----hcCCCEEEECCChHH--HHHHHHHHHHCCCEEEEcCCCcc
Confidence 3 368999999987543 46788888999999999998753
|
| >4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A* | Back alignment and structure |
|---|
Probab=97.10 E-value=0.00043 Score=68.55 Aligned_cols=103 Identities=19% Similarity=0.283 Sum_probs=63.5
Q ss_pred CCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEE-EecCh--hHHHHHHHHhCCCCC----CCccEEEEeCCCHH
Q 014694 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLAL-AGRNP--TRVKQALQWASPSHS----LSIPILTADTTDPP 80 (420)
Q Consensus 8 ~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~i-agRs~--~kl~~~~~~l~~~~~----~~~~~i~~D~~d~~ 80 (420)
+++++|-|.|||||+|+.+++.|.++. ..++.. +.++. .++.........+.. .+..+. +. +++
T Consensus 5 ~~~~kVaIvGATGyvG~eLlrlL~~hP------~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~--~~-~~~ 75 (359)
T 4dpl_A 5 RRTLKAAILGATGLVGIEYVRMLSNHP------YIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIK--PT-DPK 75 (359)
T ss_dssp -CCEEEEETTTTSTTHHHHHHHHTTCS------SEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCE--EC-CGG
T ss_pred CCCCeEEEECCCCHHHHHHHHHHHhCC------CceEEEEECchhcCCChhHhcccccccccccccccceEE--eC-CHH
Confidence 456899999999999999999777653 156544 44433 223221000000000 022222 22 333
Q ss_pred HHHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHH
Q 014694 81 SLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPE 125 (420)
Q Consensus 81 sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~ 125 (420)
+ +.++|+||.|.+-.. ...++..+.+.|+..||+|+...
T Consensus 76 ~----~~~vDvvf~a~p~~~--s~~~a~~~~~~G~~vIDlSa~~R 114 (359)
T 4dpl_A 76 L----MDDVDIIFSPLPQGA--AGPVEEQFAKEGFPVISNSPDHR 114 (359)
T ss_dssp G----CTTCCEEEECCCTTT--HHHHHHHHHHTTCEEEECSSTTT
T ss_pred H----hcCCCEEEECCChHH--HHHHHHHHHHCCCEEEEcCCCcc
Confidence 3 368999999987543 46788888999999999998753
|
| >3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.09 E-value=0.00045 Score=68.00 Aligned_cols=83 Identities=13% Similarity=0.126 Sum_probs=55.6
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
+.++|.|+||+|++|..++..++..+.. .++.+.++++++++....++.........+.. ..+..+.+++
T Consensus 7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~-----~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~-----t~d~~~al~d 76 (343)
T 3fi9_A 7 TEEKLTIVGAAGMIGSNMAQTAAMMRLT-----PNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTF-----TSDIKEALTD 76 (343)
T ss_dssp CSSEEEEETTTSHHHHHHHHHHHHTTCC-----SCEEEECSCHHHHHHHHHHHHHHCCTTCCCEE-----ESCHHHHHTT
T ss_pred CCCEEEEECCCChHHHHHHHHHHhcCCC-----CEEEEEeCCchhHHHHHHhhhhCcCCCCceEE-----cCCHHHHhCC
Confidence 3468999999999999999998887621 37999999999887655444310011111111 1235677899
Q ss_pred cCeeEeccCCCCC
Q 014694 89 TKLLLNCVGPYRL 101 (420)
Q Consensus 89 ~dvVIn~aGp~~~ 101 (420)
+|+||.++|....
T Consensus 77 ADvVvitaG~p~k 89 (343)
T 3fi9_A 77 AKYIVSSGGAPRK 89 (343)
T ss_dssp EEEEEECCC----
T ss_pred CCEEEEccCCCCC
Confidence 9999999996543
|
| >2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* | Back alignment and structure |
|---|
Probab=97.07 E-value=0.0014 Score=59.85 Aligned_cols=89 Identities=18% Similarity=0.194 Sum_probs=60.8
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
+.++|.|+| +|.+|+.+++.|.+.+ ++|.+.+|+.++++.+.+ .++.+ . ++.+++++
T Consensus 27 ~~~~I~iiG-~G~~G~~la~~l~~~g-------~~V~~~~r~~~~~~~~~~-------~g~~~--~------~~~~~~~~ 83 (215)
T 2vns_A 27 EAPKVGILG-SGDFARSLATRLVGSG-------FKVVVGSRNPKRTARLFP-------SAAQV--T------FQEEAVSS 83 (215)
T ss_dssp --CCEEEEC-CSHHHHHHHHHHHHTT-------CCEEEEESSHHHHHHHSB-------TTSEE--E------EHHHHTTS
T ss_pred CCCEEEEEc-cCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHH-------cCCce--e------cHHHHHhC
Confidence 346899999 7999999999999887 689999999888755422 12222 1 35567789
Q ss_pred cCeeEeccCCCCCCcHHHH--HHHHHcCCcEEecCCc
Q 014694 89 TKLLLNCVGPYRLHGDPVA--AACVHSGCDYLDISGE 123 (420)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv--~Ac~~~g~~yvdisge 123 (420)
+|+||.|+.+... ..++ .... .++.++|++.-
T Consensus 84 ~DvVi~av~~~~~--~~v~~l~~~~-~~~~vv~~s~g 117 (215)
T 2vns_A 84 PEVIFVAVFREHY--SSLCSLSDQL-AGKILVDVSNP 117 (215)
T ss_dssp CSEEEECSCGGGS--GGGGGGHHHH-TTCEEEECCCC
T ss_pred CCEEEECCChHHH--HHHHHHHHhc-CCCEEEEeCCC
Confidence 9999999987532 1222 2222 46667777643
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=97.07 E-value=0.00095 Score=64.88 Aligned_cols=74 Identities=15% Similarity=0.056 Sum_probs=55.2
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHH---HH
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHR---LC 86 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~---~~ 86 (420)
.-.|+|+||+|.+|..+++.+...+ .+|++.+|++++++.+. +++ .. ..+|.++.+..++ ..
T Consensus 146 g~~vlV~Ga~ggiG~~~~~~a~~~G-------~~Vi~~~~~~~~~~~~~-~~g------~~-~~~d~~~~~~~~~i~~~~ 210 (333)
T 1wly_A 146 GDYVLIHAAAGGMGHIMVPWARHLG-------ATVIGTVSTEEKAETAR-KLG------CH-HTINYSTQDFAEVVREIT 210 (333)
T ss_dssp TCEEEETTTTSTTHHHHHHHHHHTT-------CEEEEEESSHHHHHHHH-HHT------CS-EEEETTTSCHHHHHHHHH
T ss_pred CCEEEEECCccHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHH-HcC------CC-EEEECCCHHHHHHHHHHh
Confidence 3479999999999999999998887 78999999998886554 454 12 2357766543333 33
Q ss_pred h--ccCeeEeccCC
Q 014694 87 S--QTKLLLNCVGP 98 (420)
Q Consensus 87 ~--~~dvVIn~aGp 98 (420)
. +.|+||||+|.
T Consensus 211 ~~~~~d~vi~~~g~ 224 (333)
T 1wly_A 211 GGKGVDVVYDSIGK 224 (333)
T ss_dssp TTCCEEEEEECSCT
T ss_pred CCCCCeEEEECCcH
Confidence 2 58999999995
|
| >3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A | Back alignment and structure |
|---|
Probab=97.04 E-value=0.0014 Score=64.69 Aligned_cols=103 Identities=16% Similarity=0.151 Sum_probs=69.9
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh-------------------hHHHHHHHHhCC-CCCCCc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-------------------TRVKQALQWASP-SHSLSI 69 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~-------------------~kl~~~~~~l~~-~~~~~~ 69 (420)
..+|+|+|+ |.+|..++++|++.|- -++.+++++. .|.+.+.+.+.. ....++
T Consensus 118 ~~~VlvvG~-GglGs~va~~La~aGv------g~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v 190 (353)
T 3h5n_A 118 NAKVVILGC-GGIGNHVSVILATSGI------GEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISV 190 (353)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHHTC------SEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEE
T ss_pred CCeEEEECC-CHHHHHHHHHHHhCCC------CeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeE
Confidence 347999998 7799999999999983 5788888752 244444444321 012234
Q ss_pred cEEEEeCCCHHHHHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEec
Q 014694 70 PILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDI 120 (420)
Q Consensus 70 ~~i~~D~~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdi 120 (420)
..+..++++..++.. ++++|+||.|..-+...-..+-++|.+.++.+|+.
T Consensus 191 ~~~~~~i~~~~~~~~-~~~~DlVvd~~Dn~~~~r~~ln~~c~~~~~p~i~~ 240 (353)
T 3h5n_A 191 SEIALNINDYTDLHK-VPEADIWVVSADHPFNLINWVNKYCVRANQPYINA 240 (353)
T ss_dssp EEEECCCCSGGGGGG-SCCCSEEEECCCCSTTHHHHHHHHHHHTTCCEEEE
T ss_pred EEeecccCchhhhhH-hccCCEEEEecCChHHHHHHHHHHHHHhCCCEEEE
Confidence 445556666554666 89999999988644322245568999999887765
|
| >3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP} | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0014 Score=62.40 Aligned_cols=90 Identities=22% Similarity=0.197 Sum_probs=62.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
++|.|+|+||.+|..+++.|.+.+ ++|.+.+|++++++.+.+ .+ +. ..+ ..+.++++|
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g-------~~V~~~~r~~~~~~~~~~-~g------~~-----~~~---~~~~~~~aD 69 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSA-------HHLAAIEIAPEGRDRLQG-MG------IP-----LTD---GDGWIDEAD 69 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSS-------SEEEEECCSHHHHHHHHH-TT------CC-----CCC---SSGGGGTCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC-------CEEEEEECCHHHHHHHHh-cC------CC-----cCC---HHHHhcCCC
Confidence 589999999999999999999987 789999999998877654 21 11 112 234567899
Q ss_pred eeEeccCCCCCCcHHHHHHHHH---cCCcEEecCCcH
Q 014694 91 LLLNCVGPYRLHGDPVAAACVH---SGCDYLDISGEP 124 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~Ac~~---~g~~yvdisge~ 124 (420)
+||.|+.+.. -..+++.... .++.++|+|.-.
T Consensus 70 vVi~av~~~~--~~~v~~~l~~~l~~~~ivv~~s~~~ 104 (286)
T 3c24_A 70 VVVLALPDNI--IEKVAEDIVPRVRPGTIVLILDAAA 104 (286)
T ss_dssp EEEECSCHHH--HHHHHHHHGGGSCTTCEEEESCSHH
T ss_pred EEEEcCCchH--HHHHHHHHHHhCCCCCEEEECCCCc
Confidence 9999997643 1344443322 244566665544
|
| >3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A* | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0028 Score=62.06 Aligned_cols=102 Identities=14% Similarity=0.088 Sum_probs=71.0
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh-------------------hHHHHHHHHhCCCCCCCcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-------------------TRVKQALQWASPSHSLSIP 70 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~-------------------~kl~~~~~~l~~~~~~~~~ 70 (420)
..+|+|+|+ |.+|..++++|+..|- -++.+++++. .|.+.+.+.+.. ..+.++
T Consensus 34 ~~~VlIvGa-GGlGs~va~~La~aGV------g~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~-inP~v~ 105 (340)
T 3rui_A 34 NTKVLLLGA-GTLGCYVSRALIAWGV------RKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKR-IFPLMD 105 (340)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTC------CEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHH-HCTTCE
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCC------CEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHH-hCCCCE
Confidence 457999998 7799999999999983 5788887643 455555544421 123444
Q ss_pred EEEEe--C--------------CCHHHHHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEec
Q 014694 71 ILTAD--T--------------TDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDI 120 (420)
Q Consensus 71 ~i~~D--~--------------~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdi 120 (420)
+...+ + .+.+.+.++++++|+||+|...+.. ...+-++|.+.++.+|+.
T Consensus 106 v~~~~~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tDn~~t-R~lin~~c~~~~~plI~a 170 (340)
T 3rui_A 106 ATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRES-RWLPSLLSNIENKTVINA 170 (340)
T ss_dssp EEEECCCCCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSTGG-GHHHHHHHHHTTCEEEEE
T ss_pred EEEEeccccccCcccchhhhhcCCHHHHHhhhccCCEEEecCCCHHH-HHHHHHHHHHcCCcEEEe
Confidence 44433 2 1345678889999999999876542 356678999999887764
|
| >3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0071 Score=58.96 Aligned_cols=81 Identities=14% Similarity=0.186 Sum_probs=56.2
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC--CCC-CCccEEEEeCCCHHHHHHH
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--SHS-LSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~--~~~-~~~~~i~~D~~d~~sl~~~ 85 (420)
..++|.|+|| |++|..++..|+..+.. -++.+.++++++++....++.. +.. .++.+... |. +.
T Consensus 4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~-----~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~---~~----~a 70 (326)
T 3pqe_A 4 HVNKVALIGA-GFVGSSYAFALINQGIT-----DELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYG---TY----ED 70 (326)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHHHTCC-----SEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEE---CG----GG
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCC-----ceEEEEecchHHHHHHHHHHHhccccccCCeEEEeC---cH----HH
Confidence 3568999996 99999999999988620 2899999999988775544431 000 23333322 22 35
Q ss_pred HhccCeeEeccCCCCCC
Q 014694 86 CSQTKLLLNCVGPYRLH 102 (420)
Q Consensus 86 ~~~~dvVIn~aGp~~~~ 102 (420)
++++|+||.++|.....
T Consensus 71 ~~~aDvVvi~ag~p~kp 87 (326)
T 3pqe_A 71 CKDADIVCICAGANQKP 87 (326)
T ss_dssp GTTCSEEEECCSCCCCT
T ss_pred hCCCCEEEEecccCCCC
Confidence 78999999999965443
|
| >1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0069 Score=59.15 Aligned_cols=85 Identities=8% Similarity=0.001 Sum_probs=57.9
Q ss_pred CCCCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcc-eEEEEecChhHHHHHHHHhCC---CCCCCccEEEEeCCCHH
Q 014694 5 SQIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIK-SLALAGRNPTRVKQALQWASP---SHSLSIPILTADTTDPP 80 (420)
Q Consensus 5 ~~~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~-~v~iagRs~~kl~~~~~~l~~---~~~~~~~~i~~D~~d~~ 80 (420)
.+.+++++|.|+|| |.+|..++..|+..+ + +|.+.++++++++.....+.. .......+... +|
T Consensus 4 ~~~~~~~kI~VIGa-G~vG~~lA~~la~~g-------~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t--~d-- 71 (331)
T 1pzg_A 4 ALVQRRKKVAMIGS-GMIGGTMGYLCALRE-------LADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE--YS-- 71 (331)
T ss_dssp CCCSCCCEEEEECC-SHHHHHHHHHHHHHT-------CCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE--CS--
T ss_pred CcCCCCCEEEEECC-CHHHHHHHHHHHhCC-------CCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEe--CC--
Confidence 33445689999998 999999999999987 4 899999999888764333311 00111122211 23
Q ss_pred HHHHHHhccCeeEeccCCCCCC
Q 014694 81 SLHRLCSQTKLLLNCVGPYRLH 102 (420)
Q Consensus 81 sl~~~~~~~dvVIn~aGp~~~~ 102 (420)
+++.++++|+||.++|.....
T Consensus 72 -~~ea~~~aDiVi~a~g~p~~~ 92 (331)
T 1pzg_A 72 -YEAALTGADCVIVTAGLTKVP 92 (331)
T ss_dssp -HHHHHTTCSEEEECCSCSSCT
T ss_pred -HHHHhCCCCEEEEccCCCCCC
Confidence 555789999999999855433
|
| >1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A | Back alignment and structure |
|---|
Probab=96.97 E-value=0.00098 Score=64.96 Aligned_cols=89 Identities=15% Similarity=0.042 Sum_probs=68.8
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-Hhc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CSQ 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~-~~~ 88 (420)
+.+|+|+|+ |.+|+.+++.|.+++ . +.+.++++++++ +.+ .++.++.+|.+|++.++++ +++
T Consensus 115 ~~~viI~G~-G~~g~~l~~~L~~~g-------~-v~vid~~~~~~~-~~~-------~~~~~i~gd~~~~~~L~~a~i~~ 177 (336)
T 1lnq_A 115 SRHVVICGW-SESTLECLRELRGSE-------V-FVLAEDENVRKK-VLR-------SGANFVHGDPTRVSDLEKANVRG 177 (336)
T ss_dssp -CEEEEESC-CHHHHHHHTTGGGSC-------E-EEEESCGGGHHH-HHH-------TTCEEEESCTTSHHHHHHTCSTT
T ss_pred cCCEEEECC-cHHHHHHHHHHHhCC-------c-EEEEeCChhhhh-HHh-------CCcEEEEeCCCCHHHHHhcChhh
Confidence 457999997 999999999998876 7 999999999987 433 2578999999999999988 889
Q ss_pred cCeeEeccCCCCCCcHHHHHHHHHcCCc
Q 014694 89 TKLLLNCVGPYRLHGDPVAAACVHSGCD 116 (420)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~Ac~~~g~~ 116 (420)
+|.||.+.+.. .....++..+.+.+.+
T Consensus 178 a~~vi~~~~~d-~~n~~~~~~ar~~~~~ 204 (336)
T 1lnq_A 178 ARAVIVDLESD-SETIHCILGIRKIDES 204 (336)
T ss_dssp EEEEEECCSSH-HHHHHHHHHHHTTCTT
T ss_pred ccEEEEcCCcc-HHHHHHHHHHHHHCCC
Confidence 99999887632 1123445556666653
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0021 Score=62.75 Aligned_cols=94 Identities=16% Similarity=0.146 Sum_probs=63.2
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHH---HHHHHH
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPP---SLHRLC 86 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~---sl~~~~ 86 (420)
..+|+|+||+|.+|..+++.+...+ .+|++.+|++++++.+ .+++ .. ..+|..+.+ .+.+..
T Consensus 167 g~~vlV~Gasg~iG~~~~~~a~~~G-------~~Vi~~~~~~~~~~~~-~~~g------a~-~~~d~~~~~~~~~~~~~~ 231 (343)
T 2eih_A 167 GDDVLVMAAGSGVSVAAIQIAKLFG-------ARVIATAGSEDKLRRA-KALG------AD-ETVNYTHPDWPKEVRRLT 231 (343)
T ss_dssp TCEEEECSTTSTTHHHHHHHHHHTT-------CEEEEEESSHHHHHHH-HHHT------CS-EEEETTSTTHHHHHHHHT
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHH-HhcC------CC-EEEcCCcccHHHHHHHHh
Confidence 4579999999999999999988877 7899999999998665 4454 12 235776643 333333
Q ss_pred h--ccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecC
Q 014694 87 S--QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 87 ~--~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdis 121 (420)
. +.|+||+++|+ ..-...++.....| +++.+.
T Consensus 232 ~~~~~d~vi~~~g~--~~~~~~~~~l~~~G-~~v~~g 265 (343)
T 2eih_A 232 GGKGADKVVDHTGA--LYFEGVIKATANGG-RIAIAG 265 (343)
T ss_dssp TTTCEEEEEESSCS--SSHHHHHHHEEEEE-EEEESS
T ss_pred CCCCceEEEECCCH--HHHHHHHHhhccCC-EEEEEe
Confidence 2 58999999993 22233444433333 555553
|
| >3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0066 Score=59.23 Aligned_cols=80 Identities=11% Similarity=0.067 Sum_probs=55.5
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC--CCCCCccEEEEeCCCHHHHHHHH
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--SHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~--~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
+.++|.|+|| |.+|..++..|+..+.. -++.+.++++++++....++.. +....+.+. .| + .+.+
T Consensus 8 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~-----~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~-~~--~----~~a~ 74 (326)
T 3vku_A 8 DHQKVILVGD-GAVGSSYAYAMVLQGIA-----QEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIY-SA--E----YSDA 74 (326)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTCC-----SEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEE-EC--C----GGGG
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCC-----CeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEE-EC--c----HHHh
Confidence 3468999997 99999999999988621 2899999999998876666642 001122222 22 2 2358
Q ss_pred hccCeeEeccCCCCC
Q 014694 87 SQTKLLLNCVGPYRL 101 (420)
Q Consensus 87 ~~~dvVIn~aGp~~~ 101 (420)
+++|+||.++|....
T Consensus 75 ~~aDiVvi~ag~~~k 89 (326)
T 3vku_A 75 KDADLVVITAGAPQK 89 (326)
T ss_dssp TTCSEEEECCCCC--
T ss_pred cCCCEEEECCCCCCC
Confidence 899999999996443
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=96.91 E-value=0.00078 Score=64.31 Aligned_cols=68 Identities=21% Similarity=0.239 Sum_probs=50.8
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
..+++|+|+ |.+|+.++..|++.+. -+|.++.|+.++.+++.+ .+.. . ..+++.+.+.++
T Consensus 117 ~k~vlvlGa-Gg~g~aia~~L~~~G~------~~v~v~~R~~~~a~~la~--------~~~~--~---~~~~~~~~~~~a 176 (277)
T 3don_A 117 DAYILILGA-GGASKGIANELYKIVR------PTLTVANRTMSRFNNWSL--------NINK--I---NLSHAESHLDEF 176 (277)
T ss_dssp GCCEEEECC-SHHHHHHHHHHHTTCC------SCCEEECSCGGGGTTCCS--------CCEE--E---CHHHHHHTGGGC
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCCC------CEEEEEeCCHHHHHHHHH--------hccc--c---cHhhHHHHhcCC
Confidence 347999997 8899999999999872 278999999988654321 1211 1 345677778899
Q ss_pred CeeEeccC
Q 014694 90 KLLLNCVG 97 (420)
Q Consensus 90 dvVIn~aG 97 (420)
|+|||+..
T Consensus 177 DiVInaTp 184 (277)
T 3don_A 177 DIIINTTP 184 (277)
T ss_dssp SEEEECCC
T ss_pred CEEEECcc
Confidence 99999975
|
| >1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0072 Score=58.70 Aligned_cols=84 Identities=14% Similarity=0.178 Sum_probs=56.6
Q ss_pred CCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC--CCCCCccEEEEeCCCHHHHHH
Q 014694 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--SHSLSIPILTADTTDPPSLHR 84 (420)
Q Consensus 7 ~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~--~~~~~~~~i~~D~~d~~sl~~ 84 (420)
|+++++|.|+|| |.+|..++-.|+..+- .-++.+.++++++++....++.. +...++.+. .| + .+
T Consensus 2 ~~~~~KI~IiGa-G~vG~~~a~~l~~~~~-----~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~-~~--~----~~ 68 (318)
T 1ez4_A 2 MPNHQKVVLVGD-GAVGSSYAFAMAQQGI-----AEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIY-SG--E----YS 68 (318)
T ss_dssp BTTBCEEEEECC-SHHHHHHHHHHHHHTC-----CSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEE-EC--C----GG
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHcCCC-----CCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEE-EC--C----HH
Confidence 345589999998 9999999999988762 13799999999998876655532 011223333 22 2 33
Q ss_pred HHhccCeeEeccCCCCCCc
Q 014694 85 LCSQTKLLLNCVGPYRLHG 103 (420)
Q Consensus 85 ~~~~~dvVIn~aGp~~~~~ 103 (420)
.++++|+||.++|.....|
T Consensus 69 a~~~aDvVii~ag~~~~~g 87 (318)
T 1ez4_A 69 DCKDADLVVITAGAPQKPG 87 (318)
T ss_dssp GGTTCSEEEECCCC-----
T ss_pred HhCCCCEEEECCCCCCCCC
Confidence 4889999999999755443
|
| >3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0017 Score=62.06 Aligned_cols=101 Identities=18% Similarity=0.232 Sum_probs=65.6
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
..+++|+|+ |.+|+.++..|.+.+. -+|.++.|+.++.+++.+++ .. .++ +++.+ + ++
T Consensus 122 ~k~vlvlGa-GGaaraia~~L~~~G~------~~v~v~nRt~~ka~~La~~~--------~~--~~~---~~l~~-l-~~ 179 (282)
T 3fbt_A 122 NNICVVLGS-GGAARAVLQYLKDNFA------KDIYVVTRNPEKTSEIYGEF--------KV--ISY---DELSN-L-KG 179 (282)
T ss_dssp TSEEEEECS-STTHHHHHHHHHHTTC------SEEEEEESCHHHHHHHCTTS--------EE--EEH---HHHTT-C-CC
T ss_pred CCEEEEECC-cHHHHHHHHHHHHcCC------CEEEEEeCCHHHHHHHHHhc--------Cc--ccH---HHHHh-c-cC
Confidence 457999997 7799999999999872 38999999999987665422 21 222 33444 4 89
Q ss_pred CeeEeccCCCCC---CcHHHHHHHHHcCCcEEecC---CcHHHHHHHHH
Q 014694 90 KLLLNCVGPYRL---HGDPVAAACVHSGCDYLDIS---GEPEFMERMEA 132 (420)
Q Consensus 90 dvVIn~aGp~~~---~~~~vv~Ac~~~g~~yvdis---ge~~~~~~~~~ 132 (420)
|+||||...-.. ...++-..+...+...+|+. .+.+|++...+
T Consensus 180 DivInaTp~Gm~~~~~~~pi~~~~l~~~~~v~DlvY~P~~T~ll~~A~~ 228 (282)
T 3fbt_A 180 DVIINCTPKGMYPKEGESPVDKEVVAKFSSAVDLIYNPVETLFLKYARE 228 (282)
T ss_dssp SEEEECSSTTSTTSTTCCSSCHHHHTTCSEEEESCCSSSSCHHHHHHHH
T ss_pred CEEEECCccCccCCCccCCCCHHHcCCCCEEEEEeeCCCCCHHHHHHHH
Confidence 999999843211 01123344455566667765 35566665544
|
| >3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.87 E-value=0.001 Score=62.71 Aligned_cols=101 Identities=18% Similarity=0.152 Sum_probs=67.9
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccCe
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKL 91 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~dv 91 (420)
+++|+|+ |.+|+.++..|++.+. -+|.+.+|+.++.+++.+++ .. .+ .+++.+.++++|+
T Consensus 110 ~vliiGa-Gg~a~ai~~~L~~~G~------~~I~v~nR~~~ka~~la~~~--------~~--~~---~~~~~~~~~~aDi 169 (253)
T 3u62_A 110 PVVVVGA-GGAARAVIYALLQMGV------KDIWVVNRTIERAKALDFPV--------KI--FS---LDQLDEVVKKAKS 169 (253)
T ss_dssp SEEEECC-SHHHHHHHHHHHHTTC------CCEEEEESCHHHHHTCCSSC--------EE--EE---GGGHHHHHHTCSE
T ss_pred eEEEECc-HHHHHHHHHHHHHcCC------CEEEEEeCCHHHHHHHHHHc--------cc--CC---HHHHHhhhcCCCE
Confidence 7999997 8899999999999872 37999999999876543322 21 12 2456778889999
Q ss_pred eEeccCCCC-CCcHHHHHHHHHcCCcEEecCC-cHHHHHHHHH
Q 014694 92 LLNCVGPYR-LHGDPVAAACVHSGCDYLDISG-EPEFMERMEA 132 (420)
Q Consensus 92 VIn~aGp~~-~~~~~vv~Ac~~~g~~yvdisg-e~~~~~~~~~ 132 (420)
||||...-. ....++-......+...+|+.. +.+|++...+
T Consensus 170 VInatp~gm~p~~~~i~~~~l~~~~~V~Divy~~T~ll~~A~~ 212 (253)
T 3u62_A 170 LFNTTSVGMKGEELPVSDDSLKNLSLVYDVIYFDTPLVVKARK 212 (253)
T ss_dssp EEECSSTTTTSCCCSCCHHHHTTCSEEEECSSSCCHHHHHHHH
T ss_pred EEECCCCCCCCCCCCCCHHHhCcCCEEEEeeCCCcHHHHHHHH
Confidence 999884321 1111222334556667788653 6677766554
|
| >3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=96.86 E-value=0.001 Score=62.49 Aligned_cols=89 Identities=12% Similarity=0.131 Sum_probs=60.7
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcce-EEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKS-LALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~-v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
.|+|.|+|+ |.+|+.+++.|.+.+ ++ |.+.+|++++++.+.+.++ +. .. .+ +.+++++
T Consensus 10 ~m~i~iiG~-G~mG~~~a~~l~~~g-------~~~v~~~~~~~~~~~~~~~~~g------~~--~~--~~---~~~~~~~ 68 (266)
T 3d1l_A 10 DTPIVLIGA-GNLATNLAKALYRKG-------FRIVQVYSRTEESARELAQKVE------AE--YT--TD---LAEVNPY 68 (266)
T ss_dssp GCCEEEECC-SHHHHHHHHHHHHHT-------CCEEEEECSSHHHHHHHHHHTT------CE--EE--SC---GGGSCSC
T ss_pred CCeEEEEcC-CHHHHHHHHHHHHCC-------CeEEEEEeCCHHHHHHHHHHcC------Cc--ee--CC---HHHHhcC
Confidence 478999997 999999999999987 56 8899999999888776543 11 11 12 2344678
Q ss_pred cCeeEeccCCCCCCcHHHHHHHHH---cCCcEEecC
Q 014694 89 TKLLLNCVGPYRLHGDPVAAACVH---SGCDYLDIS 121 (420)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~Ac~~---~g~~yvdis 121 (420)
+|+||-|+.+... ..+++.... .++.+++++
T Consensus 69 ~Dvvi~av~~~~~--~~v~~~l~~~~~~~~ivv~~s 102 (266)
T 3d1l_A 69 AKLYIVSLKDSAF--AELLQGIVEGKREEALMVHTA 102 (266)
T ss_dssp CSEEEECCCHHHH--HHHHHHHHTTCCTTCEEEECC
T ss_pred CCEEEEecCHHHH--HHHHHHHHhhcCCCcEEEECC
Confidence 9999999876422 344443332 233455554
|
| >3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0083 Score=57.48 Aligned_cols=101 Identities=19% Similarity=0.053 Sum_probs=63.7
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
+.++|.|+|+ |.+|..+++.|++.+ ++|.+.+|++++++.+.+. + ......| +.+++++
T Consensus 6 ~~~~I~iIG~-G~mG~~~a~~l~~~G-------~~V~~~dr~~~~~~~~~~~-g------~~~~~~~------~~e~~~~ 64 (303)
T 3g0o_A 6 TDFHVGIVGL-GSMGMGAARSCLRAG-------LSTWGADLNPQACANLLAE-G------ACGAAAS------AREFAGV 64 (303)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHHTT-------CEEEEECSCHHHHHHHHHT-T------CSEEESS------STTTTTT
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHCC-------CeEEEEECCHHHHHHHHHc-C------CccccCC------HHHHHhc
Confidence 3468999975 999999999999987 7999999999998777652 1 1211112 3345677
Q ss_pred cCeeEeccCCCCCCcHHHH---H---HHHHcCCcEEecCCc-HHHHHHHH
Q 014694 89 TKLLLNCVGPYRLHGDPVA---A---ACVHSGCDYLDISGE-PEFMERME 131 (420)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv---~---Ac~~~g~~yvdisge-~~~~~~~~ 131 (420)
+|+||-|+..... -+.++ + .....+..+||.|.- +...+++.
T Consensus 65 aDvvi~~vp~~~~-~~~v~~~~~~l~~~l~~g~ivv~~st~~~~~~~~~~ 113 (303)
T 3g0o_A 65 VDALVILVVNAAQ-VRQVLFGEDGVAHLMKPGSAVMVSSTISSADAQEIA 113 (303)
T ss_dssp CSEEEECCSSHHH-HHHHHC--CCCGGGSCTTCEEEECSCCCHHHHHHHH
T ss_pred CCEEEEECCCHHH-HHHHHhChhhHHhhCCCCCEEEecCCCCHHHHHHHH
Confidence 8998888854211 01221 1 112345668888754 33444443
|
| >2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0019 Score=60.25 Aligned_cols=87 Identities=16% Similarity=0.259 Sum_probs=60.8
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
.|+|.|+| .|.+|+.+++.|.+.+ ..|.+.+|++++++.+.++++ +.. ..| +.++++++
T Consensus 3 ~m~i~iiG-~G~mG~~~a~~l~~~g-------~~v~~~~~~~~~~~~~~~~~g------~~~----~~~---~~~~~~~~ 61 (259)
T 2ahr_A 3 AMKIGIIG-VGKMASAIIKGLKQTP-------HELIISGSSLERSKEIAEQLA------LPY----AMS---HQDLIDQV 61 (259)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHTTSS-------CEEEEECSSHHHHHHHHHHHT------CCB----CSS---HHHHHHTC
T ss_pred ccEEEEEC-CCHHHHHHHHHHHhCC-------CeEEEECCCHHHHHHHHHHcC------CEe----eCC---HHHHHhcC
Confidence 36899999 5999999999998876 689999999999888776553 111 223 45567799
Q ss_pred CeeEeccCCCCCCcHHHHHHHHHcCCcEEec
Q 014694 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDI 120 (420)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdi 120 (420)
|+||.|+.+... ..+++.. +.+..+|+.
T Consensus 62 D~Vi~~v~~~~~--~~v~~~l-~~~~~vv~~ 89 (259)
T 2ahr_A 62 DLVILGIKPQLF--ETVLKPL-HFKQPIISM 89 (259)
T ss_dssp SEEEECSCGGGH--HHHHTTS-CCCSCEEEC
T ss_pred CEEEEEeCcHhH--HHHHHHh-ccCCEEEEe
Confidence 999999975422 3333322 244456665
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=96.84 E-value=0.003 Score=62.33 Aligned_cols=94 Identities=14% Similarity=0.128 Sum_probs=66.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
-+|+|+|+ |.+|..+++.+...+ .+|++.+++.++++.+.++++ .. ...|..+.+.+.++..++|
T Consensus 189 ~~VlV~Ga-G~vG~~~~q~a~~~G-------a~Vi~~~~~~~~~~~~~~~lG------a~-~v~~~~~~~~~~~~~~~~D 253 (366)
T 1yqd_A 189 KHIGIVGL-GGLGHVAVKFAKAFG-------SKVTVISTSPSKKEEALKNFG------AD-SFLVSRDQEQMQAAAGTLD 253 (366)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT-------CEEEEEESCGGGHHHHHHTSC------CS-EEEETTCHHHHHHTTTCEE
T ss_pred CEEEEECC-CHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHhcC------Cc-eEEeccCHHHHHHhhCCCC
Confidence 47999996 999999999887776 789999999999877665664 12 2357778777777777899
Q ss_pred eeEeccCCCCCCcHHHHHHHHHcCCcEEecC
Q 014694 91 LLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~Ac~~~g~~yvdis 121 (420)
+||+++|..... ...++.. +.+-+++.+.
T Consensus 254 ~vid~~g~~~~~-~~~~~~l-~~~G~iv~~g 282 (366)
T 1yqd_A 254 GIIDTVSAVHPL-LPLFGLL-KSHGKLILVG 282 (366)
T ss_dssp EEEECCSSCCCS-HHHHHHE-EEEEEEEECC
T ss_pred EEEECCCcHHHH-HHHHHHH-hcCCEEEEEc
Confidence 999999853221 3334433 3333566554
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0027 Score=62.31 Aligned_cols=74 Identities=9% Similarity=0.085 Sum_probs=54.5
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
.-.|+|+||+|.+|..+++.+...+ .+|++.+|++++++.+ ++++. . ...|..+.+..+.+.+
T Consensus 168 g~~VlV~Gg~g~iG~~~~~~a~~~G-------a~Vi~~~~~~~~~~~~-~~lGa------~-~~~~~~~~~~~~~~~~~~ 232 (353)
T 4dup_A 168 GESVLIHGGTSGIGTTAIQLARAFG-------AEVYATAGSTGKCEAC-ERLGA------K-RGINYRSEDFAAVIKAET 232 (353)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTT-------CEEEEEESSHHHHHHH-HHHTC------S-EEEETTTSCHHHHHHHHH
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHH-HhcCC------C-EEEeCCchHHHHHHHHHh
Confidence 3479999999999999999988877 7899999999998654 44641 2 2346655443333322
Q ss_pred --ccCeeEeccCC
Q 014694 88 --QTKLLLNCVGP 98 (420)
Q Consensus 88 --~~dvVIn~aGp 98 (420)
+.|+||+|+|.
T Consensus 233 ~~g~Dvvid~~g~ 245 (353)
T 4dup_A 233 GQGVDIILDMIGA 245 (353)
T ss_dssp SSCEEEEEESCCG
T ss_pred CCCceEEEECCCH
Confidence 58999999985
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=96.77 E-value=0.0039 Score=60.33 Aligned_cols=74 Identities=18% Similarity=0.113 Sum_probs=54.7
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH---H
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL---C 86 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~---~ 86 (420)
.-.|+|+||+|.+|..+++.+...+ .+|++.+|++++++.+ .+++. . ...|..+.+..+++ .
T Consensus 141 g~~VlV~Ga~g~iG~~~~~~a~~~G-------a~Vi~~~~~~~~~~~~-~~~Ga------~-~~~~~~~~~~~~~~~~~~ 205 (325)
T 3jyn_A 141 GEIILFHAAAGGVGSLACQWAKALG-------AKLIGTVSSPEKAAHA-KALGA------W-ETIDYSHEDVAKRVLELT 205 (325)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHHT-------CEEEEEESSHHHHHHH-HHHTC------S-EEEETTTSCHHHHHHHHT
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHH-HHcCC------C-EEEeCCCccHHHHHHHHh
Confidence 3479999999999999999988887 7899999999998655 45541 2 23466554433333 3
Q ss_pred h--ccCeeEeccCC
Q 014694 87 S--QTKLLLNCVGP 98 (420)
Q Consensus 87 ~--~~dvVIn~aGp 98 (420)
. +.|+||+|+|.
T Consensus 206 ~~~g~Dvvid~~g~ 219 (325)
T 3jyn_A 206 DGKKCPVVYDGVGQ 219 (325)
T ss_dssp TTCCEEEEEESSCG
T ss_pred CCCCceEEEECCCh
Confidence 2 58999999985
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0038 Score=60.57 Aligned_cols=74 Identities=11% Similarity=0.042 Sum_probs=54.3
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHH---HH
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHR---LC 86 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~---~~ 86 (420)
.-+|+|+||+|.+|..+++.+...+ .+|++.+|++++++ .+++++ .. ...|..+.+..++ ..
T Consensus 149 g~~vlV~Ga~g~iG~~~~~~a~~~G-------a~Vi~~~~~~~~~~-~~~~~g------a~-~~~~~~~~~~~~~~~~~~ 213 (334)
T 3qwb_A 149 GDYVLLFAAAGGVGLILNQLLKMKG-------AHTIAVASTDEKLK-IAKEYG------AE-YLINASKEDILRQVLKFT 213 (334)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHTT-------CEEEEEESSHHHHH-HHHHTT------CS-EEEETTTSCHHHHHHHHT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHH-HHHHcC------Cc-EEEeCCCchHHHHHHHHh
Confidence 3479999999999999999888777 78999999999986 445564 12 2346655443333 33
Q ss_pred h--ccCeeEeccCC
Q 014694 87 S--QTKLLLNCVGP 98 (420)
Q Consensus 87 ~--~~dvVIn~aGp 98 (420)
. +.|+||+|+|.
T Consensus 214 ~~~g~D~vid~~g~ 227 (334)
T 3qwb_A 214 NGKGVDASFDSVGK 227 (334)
T ss_dssp TTSCEEEEEECCGG
T ss_pred CCCCceEEEECCCh
Confidence 2 58999999985
|
| >3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0064 Score=58.50 Aligned_cols=100 Identities=17% Similarity=0.128 Sum_probs=66.8
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
+.++|.|+| .|.+|..+++.|++.+ ++|.+.+|++++++.+.+. + +. . . .++.+++++
T Consensus 8 ~~~~IgiIG-~G~mG~~~A~~l~~~G-------~~V~~~dr~~~~~~~~~~~-g------~~--~--~---~~~~e~~~~ 65 (306)
T 3l6d_A 8 FEFDVSVIG-LGAMGTIMAQVLLKQG-------KRVAIWNRSPGKAAALVAA-G------AH--L--C---ESVKAALSA 65 (306)
T ss_dssp CSCSEEEEC-CSHHHHHHHHHHHHTT-------CCEEEECSSHHHHHHHHHH-T------CE--E--C---SSHHHHHHH
T ss_pred CCCeEEEEC-CCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHC-C------Ce--e--c---CCHHHHHhc
Confidence 346899997 5999999999999987 7899999999998877653 2 11 1 1 345667788
Q ss_pred cCeeEeccCCCCCCcHHHHH----HHHHcCCcEEecCCcH-HHHHHHH
Q 014694 89 TKLLLNCVGPYRLHGDPVAA----ACVHSGCDYLDISGEP-EFMERME 131 (420)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~----Ac~~~g~~yvdisge~-~~~~~~~ 131 (420)
+|+||.|+..... -+.++. .....|..+||+|.-. ...+++.
T Consensus 66 aDvVi~~vp~~~~-~~~v~~~~~l~~~~~g~ivid~st~~~~~~~~l~ 112 (306)
T 3l6d_A 66 SPATIFVLLDNHA-THEVLGMPGVARALAHRTIVDYTTNAQDEGLALQ 112 (306)
T ss_dssp SSEEEECCSSHHH-HHHHHTSTTHHHHTTTCEEEECCCCCTTHHHHHH
T ss_pred CCEEEEEeCCHHH-HHHHhcccchhhccCCCEEEECCCCCHHHHHHHH
Confidence 9999988864221 112221 1124567788887544 3444444
|
| >2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C* | Back alignment and structure |
|---|
Probab=96.75 E-value=0.00092 Score=65.59 Aligned_cols=95 Identities=18% Similarity=0.182 Sum_probs=62.5
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEe-c-ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAG-R-NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iag-R-s~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
.++|.|.||||+||+.+++.|.++.- +.+++..+. | +..+. + .+. +..+...|. |++ .++
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~----p~~elv~i~s~~~~G~~--~--~~~-----~~~i~~~~~-~~~----~~~ 64 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREF----PVDELFLLASERSEGKT--Y--RFN-----GKTVRVQNV-EEF----DWS 64 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTC----CEEEEEEEECTTTTTCE--E--EET-----TEEEEEEEG-GGC----CGG
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCC----CCEEEEEEECCCCCCCc--e--eec-----CceeEEecC-ChH----Hhc
Confidence 47899999999999999999988731 125665544 2 22220 0 011 112222232 222 236
Q ss_pred ccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcH
Q 014694 88 QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEP 124 (420)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~ 124 (420)
++|+||-|.|.+. ....+.++.++|+..||+|+..
T Consensus 65 ~vDvVf~a~g~~~--s~~~a~~~~~~G~~vId~s~~~ 99 (336)
T 2r00_A 65 QVHIALFSAGGEL--SAKWAPIAAEAGVVVIDNTSHF 99 (336)
T ss_dssp GCSEEEECSCHHH--HHHHHHHHHHTTCEEEECSSTT
T ss_pred CCCEEEECCCchH--HHHHHHHHHHcCCEEEEcCCcc
Confidence 8999999998643 4678888999999999999874
|
| >4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0053 Score=59.43 Aligned_cols=101 Identities=15% Similarity=0.155 Sum_probs=67.6
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
+.++|.|+|. |.+|..+++.|++.+ ++|.+.+|++++++++.+. .+. .. .++.+++++
T Consensus 30 ~~~~I~iIG~-G~mG~~~a~~l~~~G-------~~V~~~dr~~~~~~~l~~~-------g~~--~~-----~~~~e~~~~ 87 (320)
T 4dll_A 30 YARKITFLGT-GSMGLPMARRLCEAG-------YALQVWNRTPARAASLAAL-------GAT--IH-----EQARAAARD 87 (320)
T ss_dssp CCSEEEEECC-TTTHHHHHHHHHHTT-------CEEEEECSCHHHHHHHHTT-------TCE--EE-----SSHHHHHTT
T ss_pred CCCEEEEECc-cHHHHHHHHHHHhCC-------CeEEEEcCCHHHHHHHHHC-------CCE--ee-----CCHHHHHhc
Confidence 3468999976 999999999999987 7999999999998776541 121 11 346677889
Q ss_pred cCeeEeccCCCCCCcHHHHH-----HHHHcCCcEEecCCcH-HHHHHHHH
Q 014694 89 TKLLLNCVGPYRLHGDPVAA-----ACVHSGCDYLDISGEP-EFMERMEA 132 (420)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~-----Ac~~~g~~yvdisge~-~~~~~~~~ 132 (420)
+|+||-|+..... -..++. .....+..+||.|.-. ...+++..
T Consensus 88 aDvVi~~vp~~~~-~~~v~~~~~~~~~l~~~~~vi~~st~~~~~~~~~~~ 136 (320)
T 4dll_A 88 ADIVVSMLENGAV-VQDVLFAQGVAAAMKPGSLFLDMASITPREARDHAA 136 (320)
T ss_dssp CSEEEECCSSHHH-HHHHHTTTCHHHHCCTTCEEEECSCCCHHHHHHHHH
T ss_pred CCEEEEECCCHHH-HHHHHcchhHHhhCCCCCEEEecCCCCHHHHHHHHH
Confidence 9999988853211 122221 1223566788887654 44444443
|
| >1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A* | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0051 Score=57.58 Aligned_cols=141 Identities=15% Similarity=0.053 Sum_probs=82.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
++|.|.|++|-+|+.+++.+.+... +++..+....+.++++.. . +.+ +.+|+++++.+.+.+.
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~------~elva~~d~~~dl~~~~~-~------~~D-vvIDfT~p~a~~~~~~~a~ 66 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADD------LTLSAELDAGDPLSLLTD-G------NTE-VVIDFTHPDVVMGNLEFLI 66 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTT------CEEEEEECTTCCTHHHHH-T------TCC-EEEECSCTTTHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC------CEEEEEEccCCCHHHHhc-c------CCc-EEEEccChHHHHHHHHHHH
Confidence 4799999999999999999876531 666544433344444433 1 233 6779998888776654
Q ss_pred --ccCeeEeccCCCCCCcHHHHHHHHHc-CCcEEecCCcH---HHHHHHHHhccCCCCCcceeeeeeeeccCCc--cccc
Q 014694 88 --QTKLLLNCVGPYRLHGDPVAAACVHS-GCDYLDISGEP---EFMERMEARQWIPPAVPNQIEAYVSLESDKR--IVGN 159 (420)
Q Consensus 88 --~~dvVIn~aGp~~~~~~~vv~Ac~~~-g~~yvdisge~---~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~--~~g~ 159 (420)
+.++||-+.|.....-..+.++|.++ ++..+..+.-. ..+.++..+... -. .|++..-.+|..|. .|
T Consensus 67 ~~g~~~VigTTG~~~e~~~~l~~aa~~~~~~~vv~a~N~siGv~ll~~l~~~aa~--~~-~dieIiE~HH~~K~DaPS-- 141 (245)
T 1p9l_A 67 DNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNFAIGAVLSMHFAKQAAR--FF-DSAEVIELHHPHKADAPS-- 141 (245)
T ss_dssp HTTCEEEECCCCCCHHHHHHHHHHHHTSTTCEEEECSCCCHHHHHHHHHHHHHGG--GC-SEEEEEEEECTTCCSSSC--
T ss_pred HcCCCEEEcCCCCCHHHHHHHHHHHHhCCCCCEEEECCccHHHHHHHHHHHHHHh--hc-CCEEEEECcccCCCCCCC--
Confidence 56889988884332224556666656 67655554322 223333332221 11 28886665554332 22
Q ss_pred cccHHHHHHHHh
Q 014694 160 FGTYESAVLGVA 171 (420)
Q Consensus 160 ~GT~~S~~~~~~ 171 (420)
||--.+...++
T Consensus 142 -GTA~~lae~i~ 152 (245)
T 1p9l_A 142 -GTAARTAKLIA 152 (245)
T ss_dssp -HHHHHHHHHHH
T ss_pred -HHHHHHHHHHH
Confidence 66555444443
|
| >3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=96.73 E-value=0.001 Score=63.73 Aligned_cols=105 Identities=17% Similarity=0.107 Sum_probs=60.6
Q ss_pred CCCCCCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceE-EEEecChhHH-HHHHHHhCCCCCCCccEEEEeCCCHH
Q 014694 3 AQSQIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNPTRV-KQALQWASPSHSLSIPILTADTTDPP 80 (420)
Q Consensus 3 ~~~~~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v-~iagRs~~kl-~~~~~~l~~~~~~~~~~i~~D~~d~~ 80 (420)
+|++|.++++|+|.||+|-+|+.+++.+.+.. .+++ .+.+|+.+.. -.-+.++. ..... ++.-.+
T Consensus 14 ~~~~m~~~irV~V~Ga~GrMGr~i~~~v~~~~------~~eLvg~vd~~~~~~~G~d~gel~--G~~~~-----gv~v~~ 80 (288)
T 3ijp_A 14 AQTQGPGSMRLTVVGANGRMGRELITAIQRRK------DVELCAVLVRKGSSFVDKDASILI--GSDFL-----GVRITD 80 (288)
T ss_dssp -------CEEEEESSTTSHHHHHHHHHHHTCS------SEEEEEEBCCTTCTTTTSBGGGGT--TCSCC-----SCBCBS
T ss_pred hhhhccCCeEEEEECCCCHHHHHHHHHHHhCC------CCEEEEEEecCCccccccchHHhh--ccCcC-----CceeeC
Confidence 45667788899999999999999999988764 1665 4456754321 00000110 00011 111113
Q ss_pred HHHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEe-cCC
Q 014694 81 SLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLD-ISG 122 (420)
Q Consensus 81 sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvd-isg 122 (420)
++++++.++|+||.+..|-. ....++.|.++|++.|- .+|
T Consensus 81 dl~~ll~~aDVvIDFT~p~a--~~~~~~~~l~~Gv~vViGTTG 121 (288)
T 3ijp_A 81 DPESAFSNTEGILDFSQPQA--SVLYANYAAQKSLIHIIGTTG 121 (288)
T ss_dssp CHHHHTTSCSEEEECSCHHH--HHHHHHHHHHHTCEEEECCCC
T ss_pred CHHHHhcCCCEEEEcCCHHH--HHHHHHHHHHcCCCEEEECCC
Confidence 46667778999998876533 25667889999998776 345
|
| >3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A* | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0082 Score=56.93 Aligned_cols=91 Identities=16% Similarity=0.072 Sum_probs=64.1
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
..+++|+|+ |.+|+.++..|++.+ .+|.++.|+.++.+++. +++ +. ..+..+. .++
T Consensus 118 ~k~vlvlGa-GGaaraia~~L~~~G-------~~v~V~nRt~~ka~~la-~~~------~~--~~~~~~l-------~~~ 173 (269)
T 3phh_A 118 YQNALILGA-GGSAKALACELKKQG-------LQVSVLNRSSRGLDFFQ-RLG------CD--CFMEPPK-------SAF 173 (269)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTT-------CEEEEECSSCTTHHHHH-HHT------CE--EESSCCS-------SCC
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHH-HCC------Ce--EecHHHh-------ccC
Confidence 357999997 899999999999987 68999999999998887 663 12 2233331 179
Q ss_pred CeeEeccCCCC----CCcHHHHHHHHHcCCcEEecCCcH
Q 014694 90 KLLLNCVGPYR----LHGDPVAAACVHSGCDYLDISGEP 124 (420)
Q Consensus 90 dvVIn~aGp~~----~~~~~vv~Ac~~~g~~yvdisge~ 124 (420)
|+||||...-. ......+.+....+.-.+|+.-.|
T Consensus 174 DiVInaTp~Gm~~~~~l~~~~l~~~l~~~~~v~D~vY~P 212 (269)
T 3phh_A 174 DLIINATSASLHNELPLNKEVLKGYFKEGKLAYDLAYGF 212 (269)
T ss_dssp SEEEECCTTCCCCSCSSCHHHHHHHHHHCSEEEESCCSS
T ss_pred CEEEEcccCCCCCCCCCChHHHHhhCCCCCEEEEeCCCC
Confidence 99999975321 123444444556677778876543
|
| >3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A* | Back alignment and structure |
|---|
Probab=96.72 E-value=0.011 Score=57.89 Aligned_cols=109 Identities=11% Similarity=0.112 Sum_probs=76.1
Q ss_pred CCCCCCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceE-EEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHH
Q 014694 3 AQSQIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPS 81 (420)
Q Consensus 3 ~~~~~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v-~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~s 81 (420)
.++...++++|.|+|+ |.+|+..++.|.+..+ ..++ ++.+|++++++++.++.+ +. . ..|
T Consensus 6 ~~m~~~~~~rvgiiG~-G~~g~~~~~~l~~~~~-----~~~lvav~d~~~~~~~~~~~~~~------~~--~--~~~--- 66 (354)
T 3q2i_A 6 IPPITDRKIRFALVGC-GRIANNHFGALEKHAD-----RAELIDVCDIDPAALKAAVERTG------AR--G--HAS--- 66 (354)
T ss_dssp CCCCCSSCEEEEEECC-STTHHHHHHHHHHTTT-----TEEEEEEECSSHHHHHHHHHHHC------CE--E--ESC---
T ss_pred eecCCCCcceEEEEcC-cHHHHHHHHHHHhCCC-----CeEEEEEEcCCHHHHHHHHHHcC------Cc--e--eCC---
Confidence 3444556789999997 8899999999888731 1564 588999999988887663 21 1 223
Q ss_pred HHHHHh--ccCeeEeccCCCCCCcHHHHHHHHHcCCcEEe---cCCcHHHHHHHHH
Q 014694 82 LHRLCS--QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLD---ISGEPEFMERMEA 132 (420)
Q Consensus 82 l~~~~~--~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvd---isge~~~~~~~~~ 132 (420)
++++++ ++|+|+-|.-+... ..++.+|.++|.|.+- ++....-.++|++
T Consensus 67 ~~~ll~~~~~D~V~i~tp~~~h--~~~~~~al~~gk~v~~EKP~a~~~~~~~~l~~ 120 (354)
T 3q2i_A 67 LTDMLAQTDADIVILTTPSGLH--PTQSIECSEAGFHVMTEKPMATRWEDGLEMVK 120 (354)
T ss_dssp HHHHHHHCCCSEEEECSCGGGH--HHHHHHHHHTTCEEEECSSSCSSHHHHHHHHH
T ss_pred HHHHhcCCCCCEEEECCCcHHH--HHHHHHHHHCCCCEEEeCCCcCCHHHHHHHHH
Confidence 455555 78999987765432 6778889999998553 4555555566655
|
| >1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0068 Score=59.04 Aligned_cols=102 Identities=15% Similarity=0.065 Sum_probs=66.0
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCC-CHHHHHHHHh
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTT-DPPSLHRLCS 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~-~~~~~~~i~~D~~-d~~sl~~~~~ 87 (420)
.++|.|+|+ |.+|..++..|.+.+ ++|.+.+|++++++.+.+..+.. ....... ...+. ...++.++++
T Consensus 4 ~mki~iiG~-G~~G~~~a~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 74 (359)
T 1bg6_A 4 SKTYAVLGL-GNGGHAFAAYLALKG-------QSVLAWDIDAQRIKEIQDRGAIIAEGPGLAG-TAHPDLLTSDIGLAVK 74 (359)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTT-------CEEEEECSCHHHHHHHHHHTSEEEESSSCCE-EECCSEEESCHHHHHT
T ss_pred cCeEEEECC-CHHHHHHHHHHHhCC-------CEEEEEeCCHHHHHHHHhcCCeEEecccccc-ccccceecCCHHHHHh
Confidence 478999997 999999999999887 78999999999988776642100 0000110 01110 1123556678
Q ss_pred ccCeeEeccCCCCCCcHHHHHHHH---HcCCcEEecCC
Q 014694 88 QTKLLLNCVGPYRLHGDPVAAACV---HSGCDYLDISG 122 (420)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~Ac~---~~g~~yvdisg 122 (420)
++|+||.|+.+... ..+++... ..++..|++.|
T Consensus 75 ~~D~vi~~v~~~~~--~~~~~~l~~~l~~~~~vv~~~~ 110 (359)
T 1bg6_A 75 DADVILIVVPAIHH--ASIAANIASYISEGQLIILNPG 110 (359)
T ss_dssp TCSEEEECSCGGGH--HHHHHHHGGGCCTTCEEEESSC
T ss_pred cCCEEEEeCCchHH--HHHHHHHHHhCCCCCEEEEcCC
Confidence 99999999976543 45554443 23566777766
|
| >2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=96.70 E-value=0.022 Score=55.45 Aligned_cols=82 Identities=13% Similarity=0.104 Sum_probs=56.1
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCC--CCCCccEEEEeCCCHHHHHHHH
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS--HSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~--~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
++++|.|+|| |.+|..++-.|+..+- .-++.+.++++++++....++... ...++.+. .| + .+.+
T Consensus 8 ~~~KI~IiGa-G~vG~~la~~l~~~~~-----~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~~--~----~~a~ 74 (326)
T 2zqz_A 8 DHQKVILVGD-GAVGSSYAYAMVLQGI-----AQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIY-SA--E----YSDA 74 (326)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTC-----CSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEE-EC--C----GGGG
T ss_pred CCCEEEEECC-CHHHHHHHHHHHcCCC-----CCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEE-EC--C----HHHh
Confidence 4479999999 9999999999888762 137999999999988766666420 11223333 22 3 3348
Q ss_pred hccCeeEeccCCCCCCc
Q 014694 87 SQTKLLLNCVGPYRLHG 103 (420)
Q Consensus 87 ~~~dvVIn~aGp~~~~~ 103 (420)
+++|+||.++|.....|
T Consensus 75 ~~aDvVii~ag~~~k~g 91 (326)
T 2zqz_A 75 KDADLVVITAGAPQKPG 91 (326)
T ss_dssp GGCSEEEECCCCC----
T ss_pred CCCCEEEEcCCCCCCCC
Confidence 89999999999765544
|
| >4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0037 Score=65.62 Aligned_cols=102 Identities=14% Similarity=0.088 Sum_probs=70.9
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh-------------------hHHHHHHHHhCCCCCCCcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-------------------TRVKQALQWASPSHSLSIP 70 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~-------------------~kl~~~~~~l~~~~~~~~~ 70 (420)
..+|+|+|+ |.+|..++++|++.|- -++.+++++. .|.+.+.+.+.. ..+.+.
T Consensus 326 ~arVLIVGa-GGLGs~vA~~La~aGV------G~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~-iNP~V~ 397 (615)
T 4gsl_A 326 NTKVLLLGA-GTLGCYVSRALIAWGV------RKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKR-IFPLMD 397 (615)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTC------CEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHH-HCTTCE
T ss_pred CCeEEEECC-CHHHHHHHHHHHHcCC------CEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHh-hCCCcE
Confidence 357999998 7799999999999983 5788888753 455555544431 113444
Q ss_pred EEEEe--C--------------CCHHHHHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEec
Q 014694 71 ILTAD--T--------------TDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDI 120 (420)
Q Consensus 71 ~i~~D--~--------------~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdi 120 (420)
+...+ + .+.+.+.++++++|+||+|...+.. ...+-++|.+.++.+|+.
T Consensus 398 v~~~~~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tDn~~t-R~~ln~~c~~~~~PlI~a 462 (615)
T 4gsl_A 398 ATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRES-RWLPSLLSNIENKTVINA 462 (615)
T ss_dssp EEEECCCCCCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSGGG-THHHHHHHHHTTCEEEEE
T ss_pred EEEeeccccccCccccchhhhcCCHHHHHHHhhcCCEEEecCCCHHH-HHHHHHHHHHcCCeEEEE
Confidence 43332 2 1345677889999999999876543 356778999998877764
|
| >3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A | Back alignment and structure |
|---|
Probab=96.69 E-value=0.0016 Score=64.65 Aligned_cols=95 Identities=17% Similarity=0.196 Sum_probs=60.5
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEe-cC-hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAG-RN-PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iag-Rs-~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
+++|.|.||||++|+.+++.|.++.- +..++..+. ++ ..+.-. +. ......-+++ +++ ++
T Consensus 2 ~~kVaIvGATG~vG~eLlrlL~~~~~----p~~el~~~as~~saG~~~~----~~-----~~~~~~~~~~-~~~----~~ 63 (366)
T 3pwk_A 2 GYTVAVVGATGAVGAQMIKMLEESTL----PIDKIRYLASARSAGKSLK----FK-----DQDITIEETT-ETA----FE 63 (366)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCC----CEEEEEEEECTTTTTCEEE----ET-----TEEEEEEECC-TTT----TT
T ss_pred CcEEEEECCCChHHHHHHHHHhcCCC----CcEEEEEEEccccCCCcce----ec-----CCCceEeeCC-HHH----hc
Confidence 47899999999999999998887631 124444433 22 222100 11 1122222332 222 46
Q ss_pred ccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcH
Q 014694 88 QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEP 124 (420)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~ 124 (420)
++|+||-|+|.+. ....+....+.|+..||+|+..
T Consensus 64 ~~Dvvf~a~~~~~--s~~~a~~~~~~G~~vIDlSa~~ 98 (366)
T 3pwk_A 64 GVDIALFSAGSST--SAKYAPYAVKAGVVVVDNTSYF 98 (366)
T ss_dssp TCSEEEECSCHHH--HHHHHHHHHHTTCEEEECSSTT
T ss_pred CCCEEEECCChHh--HHHHHHHHHHCCCEEEEcCCcc
Confidence 8999999997432 4677788889999999999863
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=96.69 E-value=0.0044 Score=60.47 Aligned_cols=73 Identities=14% Similarity=0.175 Sum_probs=55.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHh-CCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHH---HHHHH
Q 014694 11 FDVIILGASGFTGKYVVREALKL-FNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPS---LHRLC 86 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~-~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~s---l~~~~ 86 (420)
-.|+|+||+|.+|..+++.+... + .+|++.+|++++++.+ ++++ .. ...|..+.+. +.++.
T Consensus 172 ~~vlV~Gagg~iG~~~~~~a~~~~G-------a~Vi~~~~~~~~~~~~-~~~g------~~-~~~~~~~~~~~~~~~~~~ 236 (347)
T 1jvb_A 172 KTLLVVGAGGGLGTMAVQIAKAVSG-------ATIIGVDVREEAVEAA-KRAG------AD-YVINASMQDPLAEIRRIT 236 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTC-------CEEEEEESSHHHHHHH-HHHT------CS-EEEETTTSCHHHHHHHHT
T ss_pred CEEEEECCCccHHHHHHHHHHHcCC-------CeEEEEcCCHHHHHHH-HHhC------CC-EEecCCCccHHHHHHHHh
Confidence 47999999989999999999888 7 7899999999988655 4554 12 2346665443 44544
Q ss_pred h--ccCeeEeccCC
Q 014694 87 S--QTKLLLNCVGP 98 (420)
Q Consensus 87 ~--~~dvVIn~aGp 98 (420)
. +.|+||+++|.
T Consensus 237 ~~~~~d~vi~~~g~ 250 (347)
T 1jvb_A 237 ESKGVDAVIDLNNS 250 (347)
T ss_dssp TTSCEEEEEESCCC
T ss_pred cCCCceEEEECCCC
Confidence 3 68999999984
|
| >1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=96.64 E-value=0.016 Score=56.20 Aligned_cols=82 Identities=17% Similarity=0.133 Sum_probs=51.0
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCC--CCCCccEEEEeCCCHHHHHHHH
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS--HSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~--~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
++++|.|+|| |++|..++-.|+..+. .-++.+.++++++++....++... ...++.+. . .+ .+.+
T Consensus 6 ~~~KI~IiGa-G~vG~~~a~~l~~~~~-----~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~--~~----~~a~ 72 (318)
T 1y6j_A 6 SRSKVAIIGA-GFVGASAAFTMALRQT-----ANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLY-A--GD----YSDV 72 (318)
T ss_dssp -CCCEEEECC-SHHHHHHHHHHHHTTC-----SSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----C----GGGG
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC-----CCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEE-E--CC----HHHh
Confidence 4579999998 9999999999988762 138999999988877656666421 01122111 1 23 3348
Q ss_pred hccCeeEeccCCCCCCc
Q 014694 87 SQTKLLLNCVGPYRLHG 103 (420)
Q Consensus 87 ~~~dvVIn~aGp~~~~~ 103 (420)
+++|+||.++|.....+
T Consensus 73 ~~aDvVii~~g~p~k~g 89 (318)
T 1y6j_A 73 KDCDVIVVTAGANRKPG 89 (318)
T ss_dssp TTCSEEEECCCC-----
T ss_pred CCCCEEEEcCCCCCCCC
Confidence 89999999999654433
|
| >1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A* | Back alignment and structure |
|---|
Probab=96.60 E-value=0.017 Score=55.40 Aligned_cols=81 Identities=16% Similarity=0.128 Sum_probs=54.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC---CCCCCccEEEEeCCCHHHHHHHHh
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP---SHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~---~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
|+|.|+|| |.+|..++..|+..+.. -++.+.++++++++....++.. .......+ .+. +| .+.++
T Consensus 1 MkI~ViGa-G~vG~~la~~l~~~~~~-----~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i-~~t-~d----~~a~~ 68 (294)
T 1oju_A 1 MKLGFVGA-GRVGSTSAFTCLLNLDV-----DEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKI-VGG-AD----YSLLK 68 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCC-----SEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEE-EEE-SC----GGGGT
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCC-----CeEEEEECChHHHHHHHHHHHhhhhhcCCCCEE-EEe-CC----HHHhC
Confidence 68999999 99999999999888620 2899999999887633322211 01112222 221 13 34678
Q ss_pred ccCeeEeccCCCCCCc
Q 014694 88 QTKLLLNCVGPYRLHG 103 (420)
Q Consensus 88 ~~dvVIn~aGp~~~~~ 103 (420)
++|+||.++|.....|
T Consensus 69 ~aDiVViaag~~~kpG 84 (294)
T 1oju_A 69 GSEIIVVTAGLARKPG 84 (294)
T ss_dssp TCSEEEECCCCCCCSS
T ss_pred CCCEEEECCCCCCCCC
Confidence 9999999999655443
|
| >2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A | Back alignment and structure |
|---|
Probab=96.59 E-value=0.0022 Score=60.89 Aligned_cols=92 Identities=15% Similarity=0.126 Sum_probs=63.6
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
.++|+|+|+ |.+|+.++..|.+.+ .+|.+.+|+.++.+++.+++ .+...+ ++.+.++++
T Consensus 129 ~~~v~iiGa-G~~g~aia~~L~~~g-------~~V~v~~r~~~~~~~l~~~~--------g~~~~~-----~~~~~~~~a 187 (275)
T 2hk9_A 129 EKSILVLGA-GGASRAVIYALVKEG-------AKVFLWNRTKEKAIKLAQKF--------PLEVVN-----SPEEVIDKV 187 (275)
T ss_dssp GSEEEEECC-SHHHHHHHHHHHHHT-------CEEEEECSSHHHHHHHTTTS--------CEEECS-----CGGGTGGGC
T ss_pred CCEEEEECc-hHHHHHHHHHHHHcC-------CEEEEEECCHHHHHHHHHHc--------CCeeeh-----hHHhhhcCC
Confidence 458999996 889999999999987 68999999998887665432 111111 244567899
Q ss_pred CeeEeccCCCCCCc-HHHH-HHHHHcCCcEEecCC
Q 014694 90 KLLLNCVGPYRLHG-DPVA-AACVHSGCDYLDISG 122 (420)
Q Consensus 90 dvVIn~aGp~~~~~-~~vv-~Ac~~~g~~yvdisg 122 (420)
|+||+|+.+..... ..++ ..+.+.+...+|++.
T Consensus 188 DiVi~atp~~~~~~~~~~i~~~~l~~g~~viDv~~ 222 (275)
T 2hk9_A 188 QVIVNTTSVGLKDEDPEIFNYDLIKKDHVVVDIIY 222 (275)
T ss_dssp SEEEECSSTTSSTTCCCSSCGGGCCTTSEEEESSS
T ss_pred CEEEEeCCCCCCCCCCCCCCHHHcCCCCEEEEcCC
Confidence 99999998654210 0112 133455777888876
|
| >3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A | Back alignment and structure |
|---|
Probab=96.58 E-value=0.0043 Score=65.00 Aligned_cols=101 Identities=14% Similarity=0.089 Sum_probs=69.5
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC-------------------hhHHHHHHHHhCCCCCCCcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASPSHSLSIP 70 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs-------------------~~kl~~~~~~l~~~~~~~~~ 70 (420)
..+|+|+|+ |.+|..++++|++.|- -++.+++.+ ..|.+.+.+.+.. ..+.++
T Consensus 327 ~~kVLIVGa-GGLGs~va~~La~aGV------G~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~-iNP~v~ 398 (598)
T 3vh1_A 327 NTKVLLLGA-GTLGCYVSRALIAWGV------RKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKR-IFPLMD 398 (598)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHTTTC------CEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHH-HCTTCE
T ss_pred CCeEEEECC-CHHHHHHHHHHHHcCC------CEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHh-HCCCcE
Confidence 357999998 7799999999999983 478888643 2466555555431 013444
Q ss_pred EEEEe--C--------------CCHHHHHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEe
Q 014694 71 ILTAD--T--------------TDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLD 119 (420)
Q Consensus 71 ~i~~D--~--------------~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvd 119 (420)
+...+ + .+.+.+.++++++|+||+|..-+.. ...+-++|.+.++.+|+
T Consensus 399 v~~~~~~I~~pgh~i~~~~~~~l~~~~l~~li~~~DvVvdatDn~~t-R~lin~~c~~~~~plI~ 462 (598)
T 3vh1_A 399 ATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRES-RWLPSLLSNIENKTVIN 462 (598)
T ss_dssp EEEECCCCCCSSCCCCSHHHHHHHHHHHHHHHHHCSEEEECCSBGGG-THHHHHHHHHTTCEEEE
T ss_pred EEEEeccccccCcccccccccccCHHHHHHHHhcCCEEEECCCCHHH-HHHHHHHHHhcCCCEEE
Confidence 43332 2 1346678889999999999875543 35677899998887665
|
| >3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=96.58 E-value=0.012 Score=56.44 Aligned_cols=102 Identities=9% Similarity=0.006 Sum_probs=72.0
Q ss_pred CcceEEEEcCCcHHHHH-HHHHHHHhCCCCCCCcceE-EEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 014694 9 ELFDVIILGASGFTGKY-VVREALKLFNFPSSPIKSL-ALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~-va~~L~~~~~~~~~~~~~v-~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
++++|.|+|+ |.+|+. .++.|.+.. ..++ ++.+|++++.+++.++.+ +.. ..| +++++
T Consensus 5 ~~~~igiIG~-G~~g~~~~~~~l~~~~------~~~l~av~d~~~~~~~~~a~~~~------~~~----~~~---~~~ll 64 (308)
T 3uuw_A 5 KNIKMGMIGL-GSIAQKAYLPILTKSE------RFEFVGAFTPNKVKREKICSDYR------IMP----FDS---IESLA 64 (308)
T ss_dssp CCCEEEEECC-SHHHHHHTHHHHTSCS------SSEEEEEECSCHHHHHHHHHHHT------CCB----CSC---HHHHH
T ss_pred ccCcEEEEec-CHHHHHHHHHHHHhCC------CeEEEEEECCCHHHHHHHHHHcC------CCC----cCC---HHHHH
Confidence 4579999997 889985 777776643 1555 589999999988887764 111 334 45555
Q ss_pred hccCeeEeccCCCCCCcHHHHHHHHHcCCcE-Ee--cCCcHHHHHHHHH
Q 014694 87 SQTKLLLNCVGPYRLHGDPVAAACVHSGCDY-LD--ISGEPEFMERMEA 132 (420)
Q Consensus 87 ~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~y-vd--isge~~~~~~~~~ 132 (420)
+++|+|+-|..+... ..++..|.++|.|. +. ++-...-.++|++
T Consensus 65 ~~~D~V~i~tp~~~h--~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~ 111 (308)
T 3uuw_A 65 KKCDCIFLHSSTETH--YEIIKILLNLGVHVYVDKPLASTVSQGEELIE 111 (308)
T ss_dssp TTCSEEEECCCGGGH--HHHHHHHHHTTCEEEECSSSSSSHHHHHHHHH
T ss_pred hcCCEEEEeCCcHhH--HHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHH
Confidence 599999987765433 67788899999984 43 5566666666665
|
| >4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=96.58 E-value=0.0026 Score=60.47 Aligned_cols=96 Identities=19% Similarity=0.179 Sum_probs=60.9
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEE-EecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLAL-AGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~i-agRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
.++|.|+||+|.+|+.+++.+.++.. +++.. .+|+.+... -+.++. ..... . ++.-.+++++++.+
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~~~------~eLv~~~d~~~~~~~--G~d~ge--l~g~~--~-gv~v~~dl~~ll~~ 73 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAAPD------ATLVGALDRTGSPQL--GQDAGA--FLGKQ--T-GVALTDDIERVCAE 73 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHCTT------EEEEEEBCCTTCTTT--TSBTTT--TTTCC--C-SCBCBCCHHHHHHH
T ss_pred ccEEEEECCCCHHHHHHHHHHHhCCC------CEEEEEEEecCcccc--cccHHH--HhCCC--C-CceecCCHHHHhcC
Confidence 47999999999999999999987642 66644 567643210 000110 00000 0 12112346666778
Q ss_pred cCeeEeccCCCCCCcHHHHHHHHHcCCcEEec
Q 014694 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDI 120 (420)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdi 120 (420)
+|+||.+..|-. ....++.|.++|++.|--
T Consensus 74 ~DVVIDfT~p~a--~~~~~~~al~~G~~vVig 103 (272)
T 4f3y_A 74 ADYLIDFTLPEG--TLVHLDAALRHDVKLVIG 103 (272)
T ss_dssp CSEEEECSCHHH--HHHHHHHHHHHTCEEEEC
T ss_pred CCEEEEcCCHHH--HHHHHHHHHHcCCCEEEE
Confidence 999999886533 256788999999997763
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=96.57 E-value=0.0061 Score=58.45 Aligned_cols=92 Identities=15% Similarity=0.217 Sum_probs=65.9
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
+..+|.|+|+ |.+|+.+++.|...+ .+|.+.+|+.++++.+.+ ++ +.. .+ .+++++++++
T Consensus 156 ~g~~v~IiG~-G~iG~~~a~~l~~~G-------~~V~~~d~~~~~~~~~~~-~g------~~~--~~---~~~l~~~l~~ 215 (300)
T 2rir_A 156 HGSQVAVLGL-GRTGMTIARTFAALG-------ANVKVGARSSAHLARITE-MG------LVP--FH---TDELKEHVKD 215 (300)
T ss_dssp TTSEEEEECC-SHHHHHHHHHHHHTT-------CEEEEEESSHHHHHHHHH-TT------CEE--EE---GGGHHHHSTT
T ss_pred CCCEEEEEcc-cHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHH-CC------CeE--Ec---hhhHHHHhhC
Confidence 4468999996 999999999999887 799999999987755433 32 222 12 3468888999
Q ss_pred cCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCC
Q 014694 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISG 122 (420)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisg 122 (420)
+|+||+++.+. ......++. .+.+..+||++-
T Consensus 216 aDvVi~~~p~~-~i~~~~~~~-mk~g~~lin~a~ 247 (300)
T 2rir_A 216 IDICINTIPSM-ILNQTVLSS-MTPKTLILDLAS 247 (300)
T ss_dssp CSEEEECCSSC-CBCHHHHTT-SCTTCEEEECSS
T ss_pred CCEEEECCChh-hhCHHHHHh-CCCCCEEEEEeC
Confidence 99999999863 333444432 345677888873
|
| >3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=96.56 E-value=0.013 Score=57.07 Aligned_cols=102 Identities=12% Similarity=0.055 Sum_probs=72.9
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceE-EEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v-~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
++++|.|+|+ |.+|+..++.|.+... .++ ++.+|+.++++++.++++ +.. . .+++++++
T Consensus 3 ~~~rvgiiG~-G~~g~~~~~~l~~~~~------~~l~av~d~~~~~~~~~a~~~g------~~~--~-----~~~~~~l~ 62 (344)
T 3euw_A 3 LTLRIALFGA-GRIGHVHAANIAANPD------LELVVIADPFIEGAQRLAEANG------AEA--V-----ASPDEVFA 62 (344)
T ss_dssp CCEEEEEECC-SHHHHHHHHHHHHCTT------EEEEEEECSSHHHHHHHHHTTT------CEE--E-----SSHHHHTT
T ss_pred CceEEEEECC-cHHHHHHHHHHHhCCC------cEEEEEECCCHHHHHHHHHHcC------Cce--e-----CCHHHHhc
Confidence 4578999997 9999999999887631 565 478999999888776542 221 1 34667777
Q ss_pred --ccCeeEeccCCCCCCcHHHHHHHHHcCCcEEe---cCCcHHHHHHHHH
Q 014694 88 --QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLD---ISGEPEFMERMEA 132 (420)
Q Consensus 88 --~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvd---isge~~~~~~~~~ 132 (420)
++|+|+-|..+.. ...++..|.++|.|.+- ++-...-.++|++
T Consensus 63 ~~~~D~V~i~tp~~~--h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~ 110 (344)
T 3euw_A 63 RDDIDGIVIGSPTST--HVDLITRAVERGIPALCEKPIDLDIEMVRACKE 110 (344)
T ss_dssp CSCCCEEEECSCGGG--HHHHHHHHHHTTCCEEECSCSCSCHHHHHHHHH
T ss_pred CCCCCEEEEeCCchh--hHHHHHHHHHcCCcEEEECCCCCCHHHHHHHHH
Confidence 7899998886543 36788889999998543 4555555566665
|
| >2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=96.54 E-value=0.028 Score=54.00 Aligned_cols=76 Identities=14% Similarity=0.190 Sum_probs=51.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcc--eEEEEecChhHHHHHHHHhCCCC--CCCccEEEEeCCCHHHHHHHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIK--SLALAGRNPTRVKQALQWASPSH--SLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~--~v~iagRs~~kl~~~~~~l~~~~--~~~~~~i~~D~~d~~sl~~~~ 86 (420)
++|.|+|| |.+|..++..|+..+ + +|.+.++++++++....++.... .....+. .+ |. +.+
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~g-------~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~-~~--~~----~a~ 65 (304)
T 2v6b_A 1 MKVGVVGT-GFVGSTAAFALVLRG-------SCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVW-HG--GH----SEL 65 (304)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT-------CCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEE-EE--CG----GGG
T ss_pred CEEEEECC-CHHHHHHHHHHHhCC-------CCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEE-EC--CH----HHh
Confidence 47999998 999999999998876 4 89999999988876655554200 1122222 22 32 347
Q ss_pred hccCeeEeccCCCCC
Q 014694 87 SQTKLLLNCVGPYRL 101 (420)
Q Consensus 87 ~~~dvVIn~aGp~~~ 101 (420)
+++|+||.++|....
T Consensus 66 ~~aDvVIi~~~~~~~ 80 (304)
T 2v6b_A 66 ADAQVVILTAGANQK 80 (304)
T ss_dssp TTCSEEEECC-----
T ss_pred CCCCEEEEcCCCCCC
Confidence 899999999986543
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=96.53 E-value=0.0094 Score=56.97 Aligned_cols=91 Identities=15% Similarity=0.121 Sum_probs=65.7
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
+..+|.|+|+ |.+|+.+++.|...+ .+|.+.+|+.++++.+. +++ +.. .+ .+++++++++
T Consensus 154 ~g~~v~IiG~-G~iG~~~a~~l~~~G-------~~V~~~dr~~~~~~~~~-~~g------~~~--~~---~~~l~~~l~~ 213 (293)
T 3d4o_A 154 HGANVAVLGL-GRVGMSVARKFAALG-------AKVKVGARESDLLARIA-EMG------MEP--FH---ISKAAQELRD 213 (293)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTT-------CEEEEEESSHHHHHHHH-HTT------SEE--EE---GGGHHHHTTT
T ss_pred CCCEEEEEee-CHHHHHHHHHHHhCC-------CEEEEEECCHHHHHHHH-HCC------Cee--cC---hhhHHHHhcC
Confidence 3457999995 999999999998887 79999999988765443 332 222 22 3567888999
Q ss_pred cCeeEeccCCCCCCcHHHHHHHHHcCCcEEecC
Q 014694 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdis 121 (420)
+|+||+++.. .......++. .+.+..+||++
T Consensus 214 aDvVi~~~p~-~~i~~~~l~~-mk~~~~lin~a 244 (293)
T 3d4o_A 214 VDVCINTIPA-LVVTANVLAE-MPSHTFVIDLA 244 (293)
T ss_dssp CSEEEECCSS-CCBCHHHHHH-SCTTCEEEECS
T ss_pred CCEEEECCCh-HHhCHHHHHh-cCCCCEEEEec
Confidence 9999999854 4444555544 34567788887
|
| >3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=96.53 E-value=0.0064 Score=58.55 Aligned_cols=101 Identities=17% Similarity=0.206 Sum_probs=66.6
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
+.++|.|+|. |.+|..+++.|++.+ ++|.+.+|++++++.+.+ .+ +. . . .++.+++++
T Consensus 20 ~m~~I~iIG~-G~mG~~~A~~l~~~G-------~~V~~~dr~~~~~~~l~~-~g------~~--~--~---~~~~~~~~~ 77 (310)
T 3doj_A 20 HMMEVGFLGL-GIMGKAMSMNLLKNG-------FKVTVWNRTLSKCDELVE-HG------AS--V--C---ESPAEVIKK 77 (310)
T ss_dssp CSCEEEEECC-SHHHHHHHHHHHHTT-------CEEEEECSSGGGGHHHHH-TT------CE--E--C---SSHHHHHHH
T ss_pred cCCEEEEECc-cHHHHHHHHHHHHCC-------CeEEEEeCCHHHHHHHHH-CC------Ce--E--c---CCHHHHHHh
Confidence 4468999985 999999999999988 799999999999877654 21 11 1 1 345667788
Q ss_pred cCeeEeccCCCCCCcHHHH---HH---HHHcCCcEEecCCc-HHHHHHHHH
Q 014694 89 TKLLLNCVGPYRLHGDPVA---AA---CVHSGCDYLDISGE-PEFMERMEA 132 (420)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv---~A---c~~~g~~yvdisge-~~~~~~~~~ 132 (420)
+|+||-|+..... -+.++ +. ....+..+||.|.- +...+++..
T Consensus 78 aDvvi~~vp~~~~-~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~ 127 (310)
T 3doj_A 78 CKYTIAMLSDPCA-ALSVVFDKGGVLEQICEGKGYIDMSTVDAETSLKINE 127 (310)
T ss_dssp CSEEEECCSSHHH-HHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHH
T ss_pred CCEEEEEcCCHHH-HHHHHhCchhhhhccCCCCEEEECCCCCHHHHHHHHH
Confidence 9999988842111 12222 11 12345668888864 444445443
|
| >3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=96.51 E-value=0.0068 Score=60.28 Aligned_cols=99 Identities=16% Similarity=0.180 Sum_probs=69.2
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeC------------
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADT------------ 76 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~------------ 76 (420)
++.+|+|+|+ |-+|..+++.+...| .+|.+.+|+.++++.+.+ ++ ..++..|+
T Consensus 183 ~~~kV~ViG~-G~iG~~aa~~a~~lG-------a~V~v~D~~~~~l~~~~~-lG------a~~~~l~~~~~~~~gya~~~ 247 (381)
T 3p2y_A 183 KPASALVLGV-GVAGLQALATAKRLG-------AKTTGYDVRPEVAEQVRS-VG------AQWLDLGIDAAGEGGYAREL 247 (381)
T ss_dssp CCCEEEEESC-SHHHHHHHHHHHHHT-------CEEEEECSSGGGHHHHHH-TT------CEECCCC-------------
T ss_pred CCCEEEEECc-hHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHH-cC------CeEEeccccccccccchhhh
Confidence 3458999998 999999999999988 789999999999876654 43 12221110
Q ss_pred ------CCHHHHHHHHhccCeeEeccCCCC-----CCcHHHHHHHHHcCCcEEecCCc
Q 014694 77 ------TDPPSLHRLCSQTKLLLNCVGPYR-----LHGDPVAAACVHSGCDYLDISGE 123 (420)
Q Consensus 77 ------~d~~sl~~~~~~~dvVIn~aGp~~-----~~~~~vv~Ac~~~g~~yvdisge 123 (420)
.+.+.+.+.++++|+||+++.... ...+.+++... .|.-.||++-+
T Consensus 248 ~~~~~~~~~~~l~e~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~Mk-pGsVIVDvA~d 304 (381)
T 3p2y_A 248 SEAERAQQQQALEDAITKFDIVITTALVPGRPAPRLVTAAAATGMQ-PGSVVVDLAGE 304 (381)
T ss_dssp CHHHHHHHHHHHHHHHTTCSEEEECCCCTTSCCCCCBCHHHHHTSC-TTCEEEETTGG
T ss_pred hHHHHhhhHHHHHHHHhcCCEEEECCCCCCcccceeecHHHHhcCC-CCcEEEEEeCC
Confidence 124678889999999999873211 12355555543 56778888743
|
| >3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A* | Back alignment and structure |
|---|
Probab=96.51 E-value=0.032 Score=53.95 Aligned_cols=82 Identities=16% Similarity=0.265 Sum_probs=56.1
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC--CCC-CCccEEEEeCCCHHHHHHH
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--SHS-LSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~--~~~-~~~~~i~~D~~d~~sl~~~ 85 (420)
++++|.|+|| |.+|..++..|+..+. ..++.+.++++++++....++.. +.. .++.+. .| + .+.
T Consensus 5 ~~~KI~IIGa-G~vG~~la~~l~~~~~-----~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~-~~--~----~~a 71 (317)
T 3d0o_A 5 KGNKVVLIGN-GAVGSSYAFSLVNQSI-----VDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVK-AG--E----YSD 71 (317)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHCS-----CSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEE-EC--C----GGG
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC-----CCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEE-eC--C----HHH
Confidence 4579999999 9999999999988762 14799999998887654433321 011 223332 22 3 344
Q ss_pred HhccCeeEeccCCCCCCc
Q 014694 86 CSQTKLLLNCVGPYRLHG 103 (420)
Q Consensus 86 ~~~~dvVIn~aGp~~~~~ 103 (420)
++++|+||.++|.....+
T Consensus 72 ~~~aDvVvi~ag~~~~~g 89 (317)
T 3d0o_A 72 CHDADLVVICAGAAQKPG 89 (317)
T ss_dssp GTTCSEEEECCCCCCCTT
T ss_pred hCCCCEEEECCCCCCCCC
Confidence 889999999999765544
|
| >3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=96.51 E-value=0.006 Score=57.92 Aligned_cols=99 Identities=14% Similarity=0.234 Sum_probs=67.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
++|.|+|+ |.+|..+++.|++.+ ++|.+.+|++++.+.+.+. ++. . ..++.++++++|
T Consensus 2 ~~i~iIG~-G~mG~~~a~~l~~~G-------~~V~~~dr~~~~~~~~~~~-------g~~--~-----~~~~~~~~~~aD 59 (287)
T 3pef_A 2 QKFGFIGL-GIMGSAMAKNLVKAG-------CSVTIWNRSPEKAEELAAL-------GAE--R-----AATPCEVVESCP 59 (287)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT-------CEEEEECSSGGGGHHHHHT-------TCE--E-----CSSHHHHHHHCS
T ss_pred CEEEEEee-cHHHHHHHHHHHHCC-------CeEEEEcCCHHHHHHHHHC-------CCe--e-----cCCHHHHHhcCC
Confidence 57999985 999999999999987 7999999999998776652 111 1 134667778899
Q ss_pred eeEeccCCCCCCcHHHH---H---HHHHcCCcEEecCCc-HHHHHHHHH
Q 014694 91 LLLNCVGPYRLHGDPVA---A---ACVHSGCDYLDISGE-PEFMERMEA 132 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv---~---Ac~~~g~~yvdisge-~~~~~~~~~ 132 (420)
+||.|+..... -..++ + .....+..+||.|+- +...+++.+
T Consensus 60 vvi~~vp~~~~-~~~v~~~~~~l~~~l~~~~~vi~~st~~~~~~~~~~~ 107 (287)
T 3pef_A 60 VTFAMLADPAA-AEEVCFGKHGVLEGIGEGRGYVDMSTVDPATSQRIGV 107 (287)
T ss_dssp EEEECCSSHHH-HHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHH
T ss_pred EEEEEcCCHHH-HHHHHcCcchHhhcCCCCCEEEeCCCCCHHHHHHHHH
Confidence 99998852111 12222 1 223456778998874 444455443
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=96.49 E-value=0.0065 Score=59.11 Aligned_cols=75 Identities=13% Similarity=0.141 Sum_probs=54.3
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHH---H
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHR---L 85 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~---~ 85 (420)
..-+|+|+||+|.+|..+++.+...+ .+|++.+|+.++++.+ .+++. . ...|..+.+..++ .
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~~~G-------a~Vi~~~~~~~~~~~~-~~lga------~-~~~~~~~~~~~~~~~~~ 208 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQILN-------FRLIAVTRNNKHTEEL-LRLGA------A-YVIDTSTAPLYETVMEL 208 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHT-------CEEEEEESSSTTHHHH-HHHTC------S-EEEETTTSCHHHHHHHH
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHH-HhCCC------c-EEEeCCcccHHHHHHHH
Confidence 33479999999999999999888777 7899999999998655 44641 2 2346655443333 3
Q ss_pred Hh--ccCeeEeccCC
Q 014694 86 CS--QTKLLLNCVGP 98 (420)
Q Consensus 86 ~~--~~dvVIn~aGp 98 (420)
.. +.|+||+|+|.
T Consensus 209 ~~~~g~Dvvid~~g~ 223 (340)
T 3gms_A 209 TNGIGADAAIDSIGG 223 (340)
T ss_dssp TTTSCEEEEEESSCH
T ss_pred hCCCCCcEEEECCCC
Confidence 32 68999999984
|
| >2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A* | Back alignment and structure |
|---|
Probab=96.48 E-value=0.0015 Score=61.40 Aligned_cols=89 Identities=17% Similarity=0.124 Sum_probs=63.9
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccCe
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKL 91 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~dv 91 (420)
+|+|+|+ |.+|+.+++.|.+.+ .+|.+.+|+.++.+++.++++ .. ..+ +.++ +++|+
T Consensus 118 ~v~iiG~-G~~g~~~a~~l~~~g-------~~v~v~~r~~~~~~~l~~~~~------~~-----~~~---~~~~-~~~Di 174 (263)
T 2d5c_A 118 PALVLGA-GGAGRAVAFALREAG-------LEVWVWNRTPQRALALAEEFG------LR-----AVP---LEKA-REARL 174 (263)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTT-------CCEEEECSSHHHHHHHHHHHT------CE-----ECC---GGGG-GGCSE
T ss_pred eEEEECC-cHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHhc------cc-----hhh---Hhhc-cCCCE
Confidence 7999997 789999999999887 589999999999888887764 11 123 3344 78999
Q ss_pred eEeccCCCCCCc-HHHH-HHHHHcCCcEEecCCc
Q 014694 92 LLNCVGPYRLHG-DPVA-AACVHSGCDYLDISGE 123 (420)
Q Consensus 92 VIn~aGp~~~~~-~~vv-~Ac~~~g~~yvdisge 123 (420)
||+|+.+..... ..++ ..+.+.|.+++|++..
T Consensus 175 vi~~tp~~~~~~~~~~l~~~~l~~g~~viD~~~~ 208 (263)
T 2d5c_A 175 LVNATRVGLEDPSASPLPAELFPEEGAAVDLVYR 208 (263)
T ss_dssp EEECSSTTTTCTTCCSSCGGGSCSSSEEEESCCS
T ss_pred EEEccCCCCCCCCCCCCCHHHcCCCCEEEEeecC
Confidence 999998753210 0111 2344567788898754
|
| >3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri} | Back alignment and structure |
|---|
Probab=96.48 E-value=0.0041 Score=59.23 Aligned_cols=93 Identities=12% Similarity=0.158 Sum_probs=61.2
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
++++|.|+|+ |.+|+.+++.|.+.+ ++|.+.+|++++++.+.+. .+. . ..+ +.+++++
T Consensus 3 ~~~~i~iiG~-G~~G~~~a~~l~~~g-------~~V~~~~~~~~~~~~~~~~-------g~~--~--~~~---~~~~~~~ 60 (301)
T 3cky_A 3 KSIKIGFIGL-GAMGKPMAINLLKEG-------VTVYAFDLMEANVAAVVAQ-------GAQ--A--CEN---NQKVAAA 60 (301)
T ss_dssp -CCEEEEECC-CTTHHHHHHHHHHTT-------CEEEEECSSHHHHHHHHTT-------TCE--E--CSS---HHHHHHH
T ss_pred CCCEEEEECc-cHHHHHHHHHHHHCC-------CeEEEEeCCHHHHHHHHHC-------CCe--e--cCC---HHHHHhC
Confidence 4578999985 999999999999887 7899999999888765431 121 1 223 4556678
Q ss_pred cCeeEeccCCCCCCcHHHHH------HHHHcCCcEEecCCcH
Q 014694 89 TKLLLNCVGPYRLHGDPVAA------ACVHSGCDYLDISGEP 124 (420)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~------Ac~~~g~~yvdisge~ 124 (420)
+|+||.|+..... -..++. .+...++.+|+++.-.
T Consensus 61 ~D~vi~~vp~~~~-~~~v~~~~~~l~~~l~~~~~vv~~~~~~ 101 (301)
T 3cky_A 61 SDIIFTSLPNAGI-VETVMNGPGGVLSACKAGTVIVDMSSVS 101 (301)
T ss_dssp CSEEEECCSSHHH-HHHHHHSTTCHHHHSCTTCEEEECCCCC
T ss_pred CCEEEEECCCHHH-HHHHHcCcchHhhcCCCCCEEEECCCCC
Confidence 9999999843211 122331 2233466777765433
|
| >3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=96.46 E-value=0.0048 Score=59.04 Aligned_cols=102 Identities=10% Similarity=-0.003 Sum_probs=66.5
Q ss_pred CCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 014694 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 7 ~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
+...++|.|+| .|.+|..+++.|++.+ ++|.+.+|++++++.+.+. ++. . . .++++++
T Consensus 12 M~~~~~I~vIG-~G~mG~~~A~~l~~~G-------~~V~~~dr~~~~~~~~~~~-------g~~--~--~---~~~~~~~ 69 (296)
T 3qha_A 12 TTEQLKLGYIG-LGNMGAPMATRMTEWP-------GGVTVYDIRIEAMTPLAEA-------GAT--L--A---DSVADVA 69 (296)
T ss_dssp ---CCCEEEEC-CSTTHHHHHHHHTTST-------TCEEEECSSTTTSHHHHHT-------TCE--E--C---SSHHHHT
T ss_pred ccCCCeEEEEC-cCHHHHHHHHHHHHCC-------CeEEEEeCCHHHHHHHHHC-------CCE--E--c---CCHHHHH
Confidence 33456899998 5999999999999987 7899999999998776542 111 1 1 2456677
Q ss_pred hccCeeEeccCCCCCCcHHHHHHHH---HcCCcEEecCCcHH-HHHHHHH
Q 014694 87 SQTKLLLNCVGPYRLHGDPVAAACV---HSGCDYLDISGEPE-FMERMEA 132 (420)
Q Consensus 87 ~~~dvVIn~aGp~~~~~~~vv~Ac~---~~g~~yvdisge~~-~~~~~~~ 132 (420)
+ +|+||.|+..... -+.+++... ..+..+||.|.-.+ ..+++.+
T Consensus 70 ~-aDvvi~~vp~~~~-~~~v~~~l~~~l~~g~ivv~~st~~~~~~~~~~~ 117 (296)
T 3qha_A 70 A-ADLIHITVLDDAQ-VREVVGELAGHAKPGTVIAIHSTISDTTAVELAR 117 (296)
T ss_dssp T-SSEEEECCSSHHH-HHHHHHHHHTTCCTTCEEEECSCCCHHHHHHHHH
T ss_pred h-CCEEEEECCChHH-HHHHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHH
Confidence 7 9999998853211 133333333 24566888876544 4444443
|
| >1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.43 E-value=0.0052 Score=58.42 Aligned_cols=91 Identities=21% Similarity=0.282 Sum_probs=61.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
|+|.|+| .|.+|..+++.|.+.+ ++|.+.+|++++++.+.+. .+. . ..+ +.++++++|
T Consensus 6 m~i~iiG-~G~~G~~~a~~l~~~g-------~~V~~~~~~~~~~~~~~~~-------g~~--~--~~~---~~~~~~~~D 63 (299)
T 1vpd_A 6 MKVGFIG-LGIMGKPMSKNLLKAG-------YSLVVSDRNPEAIADVIAA-------GAE--T--AST---AKAIAEQCD 63 (299)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTT-------CEEEEECSCHHHHHHHHHT-------TCE--E--CSS---HHHHHHHCS
T ss_pred ceEEEEC-chHHHHHHHHHHHhCC-------CEEEEEeCCHHHHHHHHHC-------CCe--e--cCC---HHHHHhCCC
Confidence 6899999 5999999999999887 7899999999988776542 111 1 223 455677899
Q ss_pred eeEeccCCCCCCcHHHH------HHHHHcCCcEEecCCcH
Q 014694 91 LLLNCVGPYRLHGDPVA------AACVHSGCDYLDISGEP 124 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv------~Ac~~~g~~yvdisge~ 124 (420)
+||.|+..... -..++ ..+...++.+|+++.-.
T Consensus 64 ~vi~~v~~~~~-~~~~~~~~~~l~~~l~~~~~vv~~s~~~ 102 (299)
T 1vpd_A 64 VIITMLPNSPH-VKEVALGENGIIEGAKPGTVLIDMSSIA 102 (299)
T ss_dssp EEEECCSSHHH-HHHHHHSTTCHHHHCCTTCEEEECSCCC
T ss_pred EEEEECCCHHH-HHHHHhCcchHhhcCCCCCEEEECCCCC
Confidence 99999963211 12222 12234466778776443
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=96.43 E-value=0.0055 Score=60.28 Aligned_cols=74 Identities=14% Similarity=0.095 Sum_probs=52.7
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHH---HHHHH
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPS---LHRLC 86 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~s---l~~~~ 86 (420)
.-+|+|+||+|.+|..+++.+...+ .+|++.+|++++++.+. +++ .. ...|..+.+. +.+..
T Consensus 164 g~~VlV~Ga~G~iG~~~~q~a~~~G-------a~Vi~~~~~~~~~~~~~-~~G------a~-~~~~~~~~~~~~~~~~~~ 228 (362)
T 2c0c_A 164 GKKVLVTAAAGGTGQFAMQLSKKAK-------CHVIGTCSSDEKSAFLK-SLG------CD-RPINYKTEPVGTVLKQEY 228 (362)
T ss_dssp TCEEEETTTTBTTHHHHHHHHHHTT-------CEEEEEESSHHHHHHHH-HTT------CS-EEEETTTSCHHHHHHHHC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHhCC-------CEEEEEECCHHHHHHHH-HcC------Cc-EEEecCChhHHHHHHHhc
Confidence 3479999999999999999888777 78999999998886544 454 12 2345554322 22222
Q ss_pred -hccCeeEeccCC
Q 014694 87 -SQTKLLLNCVGP 98 (420)
Q Consensus 87 -~~~dvVIn~aGp 98 (420)
.++|+||+|+|.
T Consensus 229 ~~g~D~vid~~g~ 241 (362)
T 2c0c_A 229 PEGVDVVYESVGG 241 (362)
T ss_dssp TTCEEEEEECSCT
T ss_pred CCCCCEEEECCCH
Confidence 258999999984
|
| >4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ... | Back alignment and structure |
|---|
Probab=96.43 E-value=0.033 Score=54.38 Aligned_cols=111 Identities=16% Similarity=0.165 Sum_probs=70.0
Q ss_pred CCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHH
Q 014694 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 7 ~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~-~~~~~~~i~~D~~d~~sl~~~ 85 (420)
..+.++|.|+|| |.+|..++..|+..+.. .++.+.++++++++....++... ......-+.. ..|.+ .
T Consensus 16 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~-----~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~-~~d~~----~ 84 (331)
T 4aj2_A 16 QVPQNKITVVGV-GAVGMACAISILMKDLA-----DELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVS-SKDYS----V 84 (331)
T ss_dssp -CCSSEEEEECC-SHHHHHHHHHHHHTTCC-----SEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEE-CSSGG----G
T ss_pred cCCCCEEEEECC-CHHHHHHHHHHHhCCCC-----ceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEE-cCCHH----H
Confidence 345679999998 99999999999987621 38999999999888766655310 0011122221 22432 4
Q ss_pred HhccCeeEeccCCCCCCc--------------HHHHHHHHHcCC--cEEecCCcHHHHH
Q 014694 86 CSQTKLLLNCVGPYRLHG--------------DPVAAACVHSGC--DYLDISGEPEFME 128 (420)
Q Consensus 86 ~~~~dvVIn~aGp~~~~~--------------~~vv~Ac~~~g~--~yvdisge~~~~~ 128 (420)
++++|+||.++|.....| ..+++++.+..- .++.+|.....+-
T Consensus 85 ~~~aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtNPvdi~t 143 (331)
T 4aj2_A 85 TANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSNPVDILT 143 (331)
T ss_dssp GTTEEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHH
T ss_pred hCCCCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecChHHHHH
Confidence 889999999999654433 344555555532 3566654444433
|
| >3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans} | Back alignment and structure |
|---|
Probab=96.42 E-value=0.0044 Score=61.70 Aligned_cols=103 Identities=13% Similarity=0.164 Sum_probs=62.7
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEE-EE-ec-ChhH-HHHHHHHhCCCC----CCCccEEEEeCCCHH
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLA-LA-GR-NPTR-VKQALQWASPSH----SLSIPILTADTTDPP 80 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~-ia-gR-s~~k-l~~~~~~l~~~~----~~~~~~i~~D~~d~~ 80 (420)
++++|-|.|||||+|+.+++.|.++. ..++. +. .+ +..+ +.++...+.... ..+..+. |+++.+
T Consensus 18 ~~~kVaIvGAtG~vG~ell~lL~~hp------~~el~~l~aS~~saGk~~~~~~~~~~~~~~p~~~~~~~v~--~~~~~~ 89 (381)
T 3hsk_A 18 SVKKAGVLGATGSVGQRFILLLSKHP------EFEIHALGASSRSAGKKYKDAASWKQTETLPETEQDIVVQ--ECKPEG 89 (381)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCS------SEEEEEEEECTTTTTSBHHHHCCCCCSSCCCHHHHTCBCE--ESSSCT
T ss_pred CccEEEEECCCChHHHHHHHHHHcCC------CceEEEeeccccccCCCHHHhcccccccccccccccceEE--eCchhh
Confidence 34789999999999999999887763 25664 32 33 3222 322211110000 0122222 232211
Q ss_pred HHHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHH
Q 014694 81 SLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPE 125 (420)
Q Consensus 81 sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~ 125 (420)
. ++++|+||.|.+-. ....++..+.+.|+..||+|+...
T Consensus 90 ~----~~~~Dvvf~alp~~--~s~~~~~~~~~~G~~VIDlSa~fR 128 (381)
T 3hsk_A 90 N----FLECDVVFSGLDAD--VAGDIEKSFVEAGLAVVSNAKNYR 128 (381)
T ss_dssp T----GGGCSEEEECCCHH--HHHHHHHHHHHTTCEEEECCSTTT
T ss_pred h----cccCCEEEECCChh--HHHHHHHHHHhCCCEEEEcCCccc
Confidence 2 46899999998743 246778888899999999998753
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=96.42 E-value=0.0093 Score=58.21 Aligned_cols=73 Identities=11% Similarity=0.084 Sum_probs=53.4
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHH---HHHHH-
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPS---LHRLC- 86 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~s---l~~~~- 86 (420)
..|+|+||+|.+|..+++.+...+ .+|++.+++.++++.+ .+++. . ...|..+.+. +.+..
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~G-------a~Vi~~~~~~~~~~~~-~~~Ga------~-~~~~~~~~~~~~~v~~~~~ 230 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEG-------FRPIVTVRRDEQIALL-KDIGA------A-HVLNEKAPDFEATLREVMK 230 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHT-------CEEEEEESCGGGHHHH-HHHTC------S-EEEETTSTTHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHH-HHcCC------C-EEEECCcHHHHHHHHHHhc
Confidence 368999999999999999888887 7999999999998655 45641 2 2345555332 33333
Q ss_pred -hccCeeEeccCC
Q 014694 87 -SQTKLLLNCVGP 98 (420)
Q Consensus 87 -~~~dvVIn~aGp 98 (420)
.+.|+||+|+|.
T Consensus 231 ~~g~D~vid~~g~ 243 (349)
T 3pi7_A 231 AEQPRIFLDAVTG 243 (349)
T ss_dssp HHCCCEEEESSCH
T ss_pred CCCCcEEEECCCC
Confidence 269999999984
|
| >3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2} | Back alignment and structure |
|---|
Probab=96.40 E-value=0.025 Score=55.21 Aligned_cols=103 Identities=14% Similarity=0.103 Sum_probs=72.4
Q ss_pred CCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcce-EEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 014694 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKS-LALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 8 ~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~-v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
.++++|.|+|+ |.+|+..++.|.+.. ..+ +++.+|+.++.+++.++.+ ++. . .++++++
T Consensus 3 ~~~~~vgiiG~-G~~g~~~~~~l~~~~------~~~lvav~d~~~~~~~~~~~~~g------~~~----~---~~~~~~l 62 (354)
T 3db2_A 3 YNPVGVAAIGL-GRWAYVMADAYTKSE------KLKLVTCYSRTEDKREKFGKRYN------CAG----D---ATMEALL 62 (354)
T ss_dssp CCCEEEEEECC-SHHHHHHHHHHTTCS------SEEEEEEECSSHHHHHHHHHHHT------CCC----C---SSHHHHH
T ss_pred CCcceEEEEcc-CHHHHHHHHHHHhCC------CcEEEEEECCCHHHHHHHHHHcC------CCC----c---CCHHHHh
Confidence 45689999997 889999998887653 166 4588999999988877664 111 2 3356666
Q ss_pred --hccCeeEeccCCCCCCcHHHHHHHHHcCCcEEe---cCCcHHHHHHHHH
Q 014694 87 --SQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLD---ISGEPEFMERMEA 132 (420)
Q Consensus 87 --~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvd---isge~~~~~~~~~ 132 (420)
.++|+|+-|..+.. ...++.+|.++|.|.+- ++-...-.++|.+
T Consensus 63 ~~~~~D~V~i~tp~~~--h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~ 111 (354)
T 3db2_A 63 AREDVEMVIITVPNDK--HAEVIEQCARSGKHIYVEKPISVSLDHAQRIDQ 111 (354)
T ss_dssp HCSSCCEEEECSCTTS--HHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHH
T ss_pred cCCCCCEEEEeCChHH--HHHHHHHHHHcCCEEEEccCCCCCHHHHHHHHH
Confidence 46899998876543 36778888999988443 4555555666655
|
| >4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.39 E-value=0.011 Score=59.35 Aligned_cols=99 Identities=12% Similarity=0.184 Sum_probs=69.2
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEE--------------
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTA-------------- 74 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~-------------- 74 (420)
++.+|+|+|+ |-+|..+++.+...| .+|.+.+|+.++++.+.+ ++. +++..
T Consensus 189 ~~~kV~ViG~-G~iG~~aa~~a~~lG-------a~V~v~D~~~~~l~~~~~-~G~------~~~~~~~~~~~d~~~~~~y 253 (405)
T 4dio_A 189 PAAKIFVMGA-GVAGLQAIATARRLG-------AVVSATDVRPAAKEQVAS-LGA------KFIAVEDEEFKAAETAGGY 253 (405)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTT-------CEEEEECSSTTHHHHHHH-TTC------EECCCCC------------
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCC-------CEEEEEcCCHHHHHHHHH-cCC------ceeecccccccccccccch
Confidence 3468999998 999999999998887 789999999998866644 431 11111
Q ss_pred --eCCC------HHHHHHHHhccCeeEeccCCCC-----CCcHHHHHHHHHcCCcEEecCCc
Q 014694 75 --DTTD------PPSLHRLCSQTKLLLNCVGPYR-----LHGDPVAAACVHSGCDYLDISGE 123 (420)
Q Consensus 75 --D~~d------~~sl~~~~~~~dvVIn~aGp~~-----~~~~~vv~Ac~~~g~~yvdisge 123 (420)
.+++ .+.+.+.++++|+||+|+.... ...+.+++..+ .|.-.||++-+
T Consensus 254 a~e~s~~~~~~~~~~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk-~GsVIVDvA~d 314 (405)
T 4dio_A 254 AKEMSGEYQVKQAALVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMK-PGSVVVDLAVE 314 (405)
T ss_dssp -----CHHHHHHHHHHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSC-TTCEEEETTGG
T ss_pred hhhcchhhhhhhHhHHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCC-CCCEEEEEeCC
Confidence 1222 3588999999999999975221 12355565543 67778998743
|
| >2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=96.39 E-value=0.0032 Score=60.05 Aligned_cols=102 Identities=14% Similarity=0.097 Sum_probs=61.8
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEE--EeCCCHHHHHHHHh
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILT--ADTTDPPSLHRLCS 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~--~D~~d~~sl~~~~~ 87 (420)
.|+|.|+|+ |.+|..++..|++.+ ++|.+.+|++++++.+.+. +........... .++.+.+++.+.++
T Consensus 3 ~m~i~iiG~-G~~G~~~a~~l~~~g-------~~V~~~~r~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (316)
T 2ew2_A 3 AMKIAIAGA-GAMGSRLGIMLHQGG-------NDVTLIDQWPAHIEAIRKN-GLIADFNGEEVVANLPIFSPEEIDHQNE 73 (316)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTT-------CEEEEECSCHHHHHHHHHH-CEEEEETTEEEEECCCEECGGGCCTTSC
T ss_pred CCeEEEECc-CHHHHHHHHHHHhCC-------CcEEEEECCHHHHHHHHhC-CEEEEeCCCeeEecceeecchhhcccCC
Confidence 368999996 999999999999987 7899999999988777653 100000000001 11113333333445
Q ss_pred ccCeeEeccCCCCCCcHHHHHHHHH---cCCcEEecCC
Q 014694 88 QTKLLLNCVGPYRLHGDPVAAACVH---SGCDYLDISG 122 (420)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~Ac~~---~g~~yvdisg 122 (420)
++|+||-|+.+... ..+++.... .++..++++.
T Consensus 74 ~~d~vi~~v~~~~~--~~v~~~l~~~l~~~~~iv~~~~ 109 (316)
T 2ew2_A 74 QVDLIIALTKAQQL--DAMFKAIQPMITEKTYVLCLLN 109 (316)
T ss_dssp CCSEEEECSCHHHH--HHHHHHHGGGCCTTCEEEECCS
T ss_pred CCCEEEEEeccccH--HHHHHHHHHhcCCCCEEEEecC
Confidence 89999999976432 344443322 2445677653
|
| >3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=96.37 E-value=0.011 Score=54.82 Aligned_cols=70 Identities=16% Similarity=0.278 Sum_probs=50.9
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhH--------------HHHHHHHhCCCCCCCccEEEE
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR--------------VKQALQWASPSHSLSIPILTA 74 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~k--------------l~~~~~~l~~~~~~~~~~i~~ 74 (420)
..++|.|+| +|.+|..+++.|++.+ ++|.+.+|++++ ++++.++++ . +.+
T Consensus 18 ~~~kIgiIG-~G~mG~alA~~L~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~---~~~ 81 (245)
T 3dtt_A 18 QGMKIAVLG-TGTVGRTMAGALADLG-------HEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHP-----H---VHL 81 (245)
T ss_dssp -CCEEEEEC-CSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHTCC-------CCHHHHGGGST-----T---CEE
T ss_pred CCCeEEEEC-CCHHHHHHHHHHHHCC-------CEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcC-----c---eec
Confidence 446899997 6999999999999987 789999999887 333332221 1 111
Q ss_pred eCCCHHHHHHHHhccCeeEeccCCC
Q 014694 75 DTTDPPSLHRLCSQTKLLLNCVGPY 99 (420)
Q Consensus 75 D~~d~~sl~~~~~~~dvVIn~aGp~ 99 (420)
.++.++++++|+||.|+-+.
T Consensus 82 -----~~~~e~~~~aDvVilavp~~ 101 (245)
T 3dtt_A 82 -----AAFADVAAGAELVVNATEGA 101 (245)
T ss_dssp -----EEHHHHHHHCSEEEECSCGG
T ss_pred -----cCHHHHHhcCCEEEEccCcH
Confidence 23556778899999999764
|
| >2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A | Back alignment and structure |
|---|
Probab=96.35 E-value=0.044 Score=52.85 Aligned_cols=80 Identities=13% Similarity=0.086 Sum_probs=57.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCC--CCCCccEEEEeCCCHHHHHHHHhc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS--HSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~--~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
++|.|+|| |.+|..++-.|+..+. ..++.+.++++++++....++... ...++.+. .+ + .+.+++
T Consensus 1 ~KI~IiGa-G~vG~~~a~~l~~~~~-----~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~-~~--~----~~a~~~ 67 (310)
T 2xxj_A 1 MKVGIVGS-GMVGSATAYALALLGV-----AREVVLVDLDRKLAQAHAEDILHATPFAHPVWVW-AG--S----YGDLEG 67 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC-----CSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEE-EC--C----GGGGTT
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-----CCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEE-EC--C----HHHhCC
Confidence 57999998 9999999999888753 147999999999988766666420 01123333 32 3 334889
Q ss_pred cCeeEeccCCCCCCc
Q 014694 89 TKLLLNCVGPYRLHG 103 (420)
Q Consensus 89 ~dvVIn~aGp~~~~~ 103 (420)
+|+||.++|.....|
T Consensus 68 aD~Vii~ag~~~~~g 82 (310)
T 2xxj_A 68 ARAVVLAAGVAQRPG 82 (310)
T ss_dssp EEEEEECCCCCCCTT
T ss_pred CCEEEECCCCCCCCC
Confidence 999999999765544
|
| >1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5 | Back alignment and structure |
|---|
Probab=96.35 E-value=0.028 Score=54.05 Aligned_cols=102 Identities=12% Similarity=0.062 Sum_probs=70.1
Q ss_pred CcceEEEEcCCcHHHHH-HHHHHHHhCCCCCCCcceE-EEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 014694 9 ELFDVIILGASGFTGKY-VVREALKLFNFPSSPIKSL-ALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~-va~~L~~~~~~~~~~~~~v-~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
++++|.|+|+ |.+|+. +++.|.+.. ..++ ++++|+.++.+++.++.+ +. -.+|.+.+ .
T Consensus 4 ~~~~vgiiG~-G~~g~~~~~~~l~~~~------~~~lvav~d~~~~~~~~~~~~~g------~~----~~~~~~~l---~ 63 (319)
T 1tlt_A 4 KKLRIGVVGL-GGIAQKAWLPVLAAAS------DWTLQGAWSPTRAKALPICESWR------IP----YADSLSSL---A 63 (319)
T ss_dssp -CEEEEEECC-STHHHHTHHHHHHSCS------SEEEEEEECSSCTTHHHHHHHHT------CC----BCSSHHHH---H
T ss_pred CcceEEEECC-CHHHHHHHHHHHHhCC------CeEEEEEECCCHHHHHHHHHHcC------CC----ccCcHHHh---h
Confidence 4579999997 999986 888876643 1565 588999999888877664 22 13455544 4
Q ss_pred hccCeeEeccCCCCCCcHHHHHHHHHcCCc-EEe--cCCcHHHHHHHHH
Q 014694 87 SQTKLLLNCVGPYRLHGDPVAAACVHSGCD-YLD--ISGEPEFMERMEA 132 (420)
Q Consensus 87 ~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~-yvd--isge~~~~~~~~~ 132 (420)
.++|+|+-|..+... ..++.+|.++|.| +++ ++-...-.++|++
T Consensus 64 ~~~D~V~i~tp~~~h--~~~~~~al~~G~~v~~eKP~~~~~~~~~~l~~ 110 (319)
T 1tlt_A 64 ASCDAVFVHSSTASH--FDVVSTLLNAGVHVCVDKPLAENLRDAERLVE 110 (319)
T ss_dssp TTCSEEEECSCTTHH--HHHHHHHHHTTCEEEEESSSCSSHHHHHHHHH
T ss_pred cCCCEEEEeCCchhH--HHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHH
Confidence 689999988765332 5778889999998 444 3444555566655
|
| >4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=96.34 E-value=0.0096 Score=58.78 Aligned_cols=101 Identities=14% Similarity=0.064 Sum_probs=66.8
Q ss_pred CCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 014694 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 7 ~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
|.+.++|.|+| .|.+|..+++.|++.+ ++|.+.+|++++++.+.+. .+. ...+ +.+++
T Consensus 19 Mm~~mkIgiIG-lG~mG~~~A~~L~~~G-------~~V~v~dr~~~~~~~l~~~-------g~~----~~~s---~~e~~ 76 (358)
T 4e21_A 19 YFQSMQIGMIG-LGRMGADMVRRLRKGG-------HECVVYDLNVNAVQALERE-------GIA----GARS---IEEFC 76 (358)
T ss_dssp ---CCEEEEEC-CSHHHHHHHHHHHHTT-------CEEEEECSCHHHHHHHHTT-------TCB----CCSS---HHHHH
T ss_pred hhcCCEEEEEC-chHHHHHHHHHHHhCC-------CEEEEEeCCHHHHHHHHHC-------CCE----EeCC---HHHHH
Confidence 33457899998 5999999999999988 7999999999998776531 111 1223 44555
Q ss_pred hcc---CeeEeccCCCCCCcHHHHHHHHH---cCCcEEecCCcHH-HHHHHH
Q 014694 87 SQT---KLLLNCVGPYRLHGDPVAAACVH---SGCDYLDISGEPE-FMERME 131 (420)
Q Consensus 87 ~~~---dvVIn~aGp~~~~~~~vv~Ac~~---~g~~yvdisge~~-~~~~~~ 131 (420)
+++ |+||.|+.+. .-..+++.... .+.-+||.+...+ -.+++.
T Consensus 77 ~~a~~~DvVi~~vp~~--~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~ 126 (358)
T 4e21_A 77 AKLVKPRVVWLMVPAA--VVDSMLQRMTPLLAANDIVIDGGNSHYQDDIRRA 126 (358)
T ss_dssp HHSCSSCEEEECSCGG--GHHHHHHHHGGGCCTTCEEEECSSCCHHHHHHHH
T ss_pred hcCCCCCEEEEeCCHH--HHHHHHHHHHhhCCCCCEEEeCCCCChHHHHHHH
Confidence 555 9999998765 23445544332 3556888875543 334443
|
| >2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A* | Back alignment and structure |
|---|
Probab=96.34 E-value=0.0026 Score=66.10 Aligned_cols=70 Identities=21% Similarity=0.157 Sum_probs=50.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHH-HHhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHR-LCSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~-~~~~~ 89 (420)
..++|+|| |.+|+.++..|++.+ .+|.+++|+.++++++.++++. .+ .++.| +.+ .....
T Consensus 365 k~vlV~Ga-GGig~aia~~L~~~G-------~~V~i~~R~~~~a~~la~~~~~------~~--~~~~d---l~~~~~~~~ 425 (523)
T 2o7s_A 365 KTVVVIGA-GGAGKALAYGAKEKG-------AKVVIANRTYERALELAEAIGG------KA--LSLTD---LDNYHPEDG 425 (523)
T ss_dssp -CEEEECC-SHHHHHHHHHHHHHC-------C-CEEEESSHHHHHHHHHHTTC-------C--EETTT---TTTC--CCS
T ss_pred CEEEEECC-cHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHcCC------ce--eeHHH---hhhccccCc
Confidence 36999999 699999999999998 6899999999999888877631 11 13322 222 12357
Q ss_pred CeeEeccCCC
Q 014694 90 KLLLNCVGPY 99 (420)
Q Consensus 90 dvVIn~aGp~ 99 (420)
|+||||+|..
T Consensus 426 DilVN~agvg 435 (523)
T 2o7s_A 426 MVLANTTSMG 435 (523)
T ss_dssp EEEEECSSTT
T ss_pred eEEEECCCCC
Confidence 9999999853
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=96.34 E-value=0.0099 Score=57.91 Aligned_cols=74 Identities=12% Similarity=0.142 Sum_probs=52.1
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCC-C-HHHHHHHHh
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTT-D-PPSLHRLCS 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~-d-~~sl~~~~~ 87 (420)
.-+|+|+||+|.+|..+++.+...+ .+|++.+++.++++. +++++. .. ..|.. + .+.+.+...
T Consensus 160 g~~VlV~Gasg~iG~~~~~~a~~~G-------a~Vi~~~~~~~~~~~-~~~~ga------~~-v~~~~~~~~~~v~~~~~ 224 (342)
T 4eye_A 160 GETVLVLGAAGGIGTAAIQIAKGMG-------AKVIAVVNRTAATEF-VKSVGA------DI-VLPLEEGWAKAVREATG 224 (342)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTT-------CEEEEEESSGGGHHH-HHHHTC------SE-EEESSTTHHHHHHHHTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcC-------CEEEEEeCCHHHHHH-HHhcCC------cE-EecCchhHHHHHHHHhC
Confidence 3479999999999999999888777 789999999999854 445641 21 23443 2 123333333
Q ss_pred --ccCeeEeccCC
Q 014694 88 --QTKLLLNCVGP 98 (420)
Q Consensus 88 --~~dvVIn~aGp 98 (420)
+.|+||+|+|.
T Consensus 225 ~~g~Dvvid~~g~ 237 (342)
T 4eye_A 225 GAGVDMVVDPIGG 237 (342)
T ss_dssp TSCEEEEEESCC-
T ss_pred CCCceEEEECCch
Confidence 58999999985
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=96.33 E-value=0.0055 Score=58.53 Aligned_cols=72 Identities=18% Similarity=0.162 Sum_probs=53.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
-+|+|+||+|.+|..+++.+...+ .+|++.+|++++++.+ ++++ .. ...|..+.+++.+.+.++|
T Consensus 127 ~~vlV~Ga~G~vG~~~~~~a~~~G-------a~Vi~~~~~~~~~~~~-~~~g------a~-~~~~~~~~~~~~~~~~~~d 191 (302)
T 1iz0_A 127 EKVLVQAAAGALGTAAVQVARAMG-------LRVLAAASRPEKLALP-LALG------AE-EAATYAEVPERAKAWGGLD 191 (302)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTT-------CEEEEEESSGGGSHHH-HHTT------CS-EEEEGGGHHHHHHHTTSEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHH-HhcC------CC-EEEECCcchhHHHHhcCce
Confidence 479999999999999999887776 7899999999988655 4454 12 2346655133444458899
Q ss_pred eeEeccCC
Q 014694 91 LLLNCVGP 98 (420)
Q Consensus 91 vVIn~aGp 98 (420)
+||+ +|.
T Consensus 192 ~vid-~g~ 198 (302)
T 1iz0_A 192 LVLE-VRG 198 (302)
T ss_dssp EEEE-CSC
T ss_pred EEEE-CCH
Confidence 9999 885
|
| >3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=96.32 E-value=0.036 Score=53.74 Aligned_cols=104 Identities=11% Similarity=0.110 Sum_probs=71.0
Q ss_pred CCcceEEEEcCCcHHHHHHHHHHH-HhCCCCCCCcce-EEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 014694 8 PELFDVIILGASGFTGKYVVREAL-KLFNFPSSPIKS-LALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 8 ~~~~~IvV~GATG~~G~~va~~L~-~~~~~~~~~~~~-v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~ 85 (420)
.++++|.|+|+ |.+|+..++.|. +.. ..+ +++.+|++++++++.++++ +..+ . .| ++++
T Consensus 6 ~~~~~v~iiG~-G~ig~~~~~~l~~~~~------~~~~vav~d~~~~~~~~~a~~~g------~~~~-~--~~---~~~~ 66 (346)
T 3cea_A 6 RKPLRAAIIGL-GRLGERHARHLVNKIQ------GVKLVAACALDSNQLEWAKNELG------VETT-Y--TN---YKDM 66 (346)
T ss_dssp CCCEEEEEECC-STTHHHHHHHHHHTCS------SEEEEEEECSCHHHHHHHHHTTC------CSEE-E--SC---HHHH
T ss_pred CCcceEEEEcC-CHHHHHHHHHHHhcCC------CcEEEEEecCCHHHHHHHHHHhC------CCcc-c--CC---HHHH
Confidence 35579999997 899999999887 432 156 4678999999887776553 2111 1 23 5566
Q ss_pred Hh--ccCeeEeccCCCCCCcHHHHHHHHHcCCcE-Ee--cCCcHHHHHHHHH
Q 014694 86 CS--QTKLLLNCVGPYRLHGDPVAAACVHSGCDY-LD--ISGEPEFMERMEA 132 (420)
Q Consensus 86 ~~--~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~y-vd--isge~~~~~~~~~ 132 (420)
++ ++|+||-|..+... ..++..|.++|.|. ++ ++-...-.++|++
T Consensus 67 l~~~~~D~V~i~tp~~~h--~~~~~~al~~G~~v~~eKp~~~~~~~~~~l~~ 116 (346)
T 3cea_A 67 IDTENIDAIFIVAPTPFH--PEMTIYAMNAGLNVFCEKPLGLDFNEVDEMAK 116 (346)
T ss_dssp HTTSCCSEEEECSCGGGH--HHHHHHHHHTTCEEEECSCCCSCHHHHHHHHH
T ss_pred hcCCCCCEEEEeCChHhH--HHHHHHHHHCCCEEEEcCCCCCCHHHHHHHHH
Confidence 65 68999988865433 57778889999884 43 3444555556654
|
| >1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=96.30 E-value=0.012 Score=57.79 Aligned_cols=99 Identities=16% Similarity=0.180 Sum_probs=67.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceE-EEEecChhHHHHHHHHhCCCCCCCccEEEE-eCC---------CH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNPTRVKQALQWASPSHSLSIPILTA-DTT---------DP 79 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v-~iagRs~~kl~~~~~~l~~~~~~~~~~i~~-D~~---------d~ 79 (420)
++|-|.|+ |++|+.+++.|.++.. .++ .+.+++.++........+ +.+... |.. -.
T Consensus 2 ikVgIiGa-G~iG~~~~r~L~~~p~------~elvav~d~~~~~~~~~a~~~g------~~~~~~~~~~~~~~~~~v~v~ 68 (340)
T 1b7g_O 2 VNVAVNGY-GTIGKRVADAIIKQPD------MKLVGVAKTSPNYEAFIAHRRG------IRIYVPQQSIKKFEESGIPVA 68 (340)
T ss_dssp EEEEEECC-SHHHHHHHHHHHTCTT------EEEEEEECSSCSHHHHHHHHTT------CCEECCGGGHHHHHTTTCCCC
T ss_pred eEEEEEec-CHHHHHHHHHHHcCCC------CEEEEEEcCChHHHHHHHHhcC------cceecCcCHHHHhcccccccc
Confidence 57999999 9999999999887641 555 567787666655554421 222211 100 00
Q ss_pred HHHHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcH
Q 014694 80 PSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEP 124 (420)
Q Consensus 80 ~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~ 124 (420)
+++++++.++|+||-|.+.+. .....+.+.++|+..||+++..
T Consensus 69 ~~~e~l~~~vDvV~~aTp~~~--s~~~a~~~~~aG~kvV~~sa~~ 111 (340)
T 1b7g_O 69 GTVEDLIKTSDIVVDTTPNGV--GAQYKPIYLQLQRNAIFQGGEK 111 (340)
T ss_dssp CCHHHHHHHCSEEEECCSTTH--HHHHHHHHHHTTCEEEECTTSC
T ss_pred cCHhHhhcCCCEEEECCCCch--hHHHHHHHHHcCCeEEEeCCCC
Confidence 123355568999999998754 3567788999999999999883
|
| >1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=96.30 E-value=0.0089 Score=57.92 Aligned_cols=97 Identities=15% Similarity=0.185 Sum_probs=65.7
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcce-EEEEecChhH-HHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKS-LALAGRNPTR-VKQALQWASPSHSLSIPILTADTTDPPSLHRL- 85 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~-v~iagRs~~k-l~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~- 85 (420)
++++|.|+| +|++|+.+++.|.++.+ ..+ +.+++|++++ .+++.++++ +... ..+.+++.+.
T Consensus 3 ~~irVaIIG-~G~iG~~~~~~l~~~~~-----~~elvav~d~~~~~~~~~~a~~~g------~~~~---~~~~e~ll~~~ 67 (312)
T 1nvm_B 3 QKLKVAIIG-SGNIGTDLMIKVLRNAK-----YLEMGAMVGIDAASDGLARAQRMG------VTTT---YAGVEGLIKLP 67 (312)
T ss_dssp SCEEEEEEC-CSHHHHHHHHHHHHHCS-----SEEEEEEECSCTTCHHHHHHHHTT------CCEE---SSHHHHHHHSG
T ss_pred CCCEEEEEc-CcHHHHHHHHHHHhhCc-----CeEEEEEEeCChhhhHHHHHHHcC------CCcc---cCCHHHHHhcc
Confidence 568999999 69999999999877432 143 5678899877 556666553 1211 1222333222
Q ss_pred -HhccCeeEeccCCCCCCcHHHHHHHHHc--CCcEEecCC
Q 014694 86 -CSQTKLLLNCVGPYRLHGDPVAAACVHS--GCDYLDISG 122 (420)
Q Consensus 86 -~~~~dvVIn~aGp~~~~~~~vv~Ac~~~--g~~yvdisg 122 (420)
..++|+||-++++. ....++..|.++ |.|.++.+.
T Consensus 68 ~~~~iDvV~~atp~~--~h~~~a~~al~a~~Gk~Vi~ekp 105 (312)
T 1nvm_B 68 EFADIDFVFDATSAS--AHVQNEALLRQAKPGIRLIDLTP 105 (312)
T ss_dssp GGGGEEEEEECSCHH--HHHHHHHHHHHHCTTCEEEECST
T ss_pred CCCCCcEEEECCChH--HHHHHHHHHHHhCCCCEEEEcCc
Confidence 24689999999853 236777888899 999998664
|
| >1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A* | Back alignment and structure |
|---|
Probab=96.29 E-value=0.041 Score=53.21 Aligned_cols=82 Identities=20% Similarity=0.251 Sum_probs=55.4
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC--C-CCCCccEEEEeCCCHHHHHHH
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--S-HSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~--~-~~~~~~~i~~D~~d~~sl~~~ 85 (420)
..++|.|+|| |.+|..++..|+..+. ..++.+.++++++++....++.. . ...++.+. . .+. +.
T Consensus 5 ~~~kI~IIGa-G~vG~sla~~l~~~~~-----~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~-~--~~~----~a 71 (316)
T 1ldn_A 5 GGARVVVIGA-GFVGASYVFALMNQGI-----ADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIW-H--GDY----DD 71 (316)
T ss_dssp TSCEEEEECC-SHHHHHHHHHHHHHTC-----CSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEE-E--CCG----GG
T ss_pred CCCEEEEECc-CHHHHHHHHHHHhCCC-----CCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEE-c--CcH----HH
Confidence 4468999999 9999999999887762 14799999998877654443321 0 11123333 2 222 34
Q ss_pred HhccCeeEeccCCCCCCc
Q 014694 86 CSQTKLLLNCVGPYRLHG 103 (420)
Q Consensus 86 ~~~~dvVIn~aGp~~~~~ 103 (420)
++++|+||.++|.....+
T Consensus 72 l~~aDvViia~~~~~~~g 89 (316)
T 1ldn_A 72 CRDADLVVICAGANQKPG 89 (316)
T ss_dssp TTTCSEEEECCSCCCCTT
T ss_pred hCCCCEEEEcCCCCCCCC
Confidence 789999999998765443
|
| >3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum} | Back alignment and structure |
|---|
Probab=96.28 E-value=0.0098 Score=58.81 Aligned_cols=112 Identities=14% Similarity=0.140 Sum_probs=71.7
Q ss_pred CCCcceEEEEcCCcHHHHH-HH----HHHHHhCCCC----CCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCC
Q 014694 7 IPELFDVIILGASGFTGKY-VV----REALKLFNFP----SSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTT 77 (420)
Q Consensus 7 ~~~~~~IvV~GATG~~G~~-va----~~L~~~~~~~----~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~ 77 (420)
+.++++|.|+|++|++|+. .+ +.+.+..... .....++++++|+.++.+++.++.+ +.-+ .+
T Consensus 3 ~~~~irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~~~~~a~~~a~~~~------~~~~---~~ 73 (383)
T 3oqb_A 3 TTQRLGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGRSAEKVEALAKRFN------IARW---TT 73 (383)
T ss_dssp CCEEEEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECSSSHHHHHHHHHTT------CCCE---ES
T ss_pred CCceeEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcCCHHHHHHHHHHhC------CCcc---cC
Confidence 4567899999999999997 66 6666654100 0000122599999999988888764 1111 12
Q ss_pred CHHHHHHHHhc--cCeeEeccCCCCCCcHHHHHHHHHcCCcEEe---cCCcHHHHHHHHH
Q 014694 78 DPPSLHRLCSQ--TKLLLNCVGPYRLHGDPVAAACVHSGCDYLD---ISGEPEFMERMEA 132 (420)
Q Consensus 78 d~~sl~~~~~~--~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvd---isge~~~~~~~~~ 132 (420)
| +++++++ .|+|+-|..+.. ...++.+|.++|.|.+- ++-...=.++|++
T Consensus 74 ~---~~~ll~~~~iD~V~i~tp~~~--h~~~~~~al~~Gk~V~~EKP~a~~~~~~~~l~~ 128 (383)
T 3oqb_A 74 D---LDAALADKNDTMFFDAATTQA--RPGLLTQAINAGKHVYCEKPIATNFEEALEVVK 128 (383)
T ss_dssp C---HHHHHHCSSCCEEEECSCSSS--SHHHHHHHHTTTCEEEECSCSCSSHHHHHHHHH
T ss_pred C---HHHHhcCCCCCEEEECCCchH--HHHHHHHHHHCCCeEEEcCCCCCCHHHHHHHHH
Confidence 3 5666654 888887766533 36888899999998442 2444444555554
|
| >3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A* | Back alignment and structure |
|---|
Probab=96.26 E-value=0.04 Score=53.28 Aligned_cols=82 Identities=17% Similarity=0.074 Sum_probs=53.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHh-CCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKL-FNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~-~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
|+|.|+||+|++|..++..|..+ .- ..++.+.++++ +++-...++.. ......+... .. ....+.++++
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~-----~~el~L~Di~~-~~~G~a~Dl~~-~~~~~~v~~~-~~--~~~~~~~~~a 70 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPS-----GSELSLYDIAP-VTPGVAVDLSH-IPTAVKIKGF-SG--EDATPALEGA 70 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCT-----TEEEEEECSST-THHHHHHHHHT-SCSSEEEEEE-CS--SCCHHHHTTC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCC-----CceEEEEecCC-CchhHHHHhhC-CCCCceEEEe-cC--CCcHHHhCCC
Confidence 58999999999999999988876 31 15799999987 44444444431 1111122211 11 1135678899
Q ss_pred CeeEeccCCCCCC
Q 014694 90 KLLLNCVGPYRLH 102 (420)
Q Consensus 90 dvVIn~aGp~~~~ 102 (420)
|+||-++|.....
T Consensus 71 Divii~ag~~rkp 83 (312)
T 3hhp_A 71 DVVLISAGVARKP 83 (312)
T ss_dssp SEEEECCSCSCCT
T ss_pred CEEEEeCCCCCCC
Confidence 9999999965543
|
| >3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A | Back alignment and structure |
|---|
Probab=96.24 E-value=0.0015 Score=64.20 Aligned_cols=94 Identities=17% Similarity=0.104 Sum_probs=60.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEe-cCh-hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAG-RNP-TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iag-Rs~-~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
++|-|.|||||+|+.+++.|.++.- +..++..+. ++. .+. +. +. ..+...-|+++ + .+++
T Consensus 2 ~~VaIvGatG~vG~el~~lL~~h~f----p~~el~~~~s~~~aG~~--~~--~~-----~~~~~~~~~~~-~----~~~~ 63 (344)
T 3tz6_A 2 LSIGIVGATGQVGQVMRTLLDERDF----PASAVRFFASARSQGRK--LA--FR-----GQEIEVEDAET-A----DPSG 63 (344)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTC----CEEEEEEEECTTTSSCE--EE--ET-----TEEEEEEETTT-S----CCTT
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC----CceEEEEEECcccCCCc--ee--ec-----CCceEEEeCCH-H----Hhcc
Confidence 6899999999999999998888730 124555443 322 111 00 11 11222233332 2 2368
Q ss_pred cCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcH
Q 014694 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEP 124 (420)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~ 124 (420)
+|+||-|.|-+. ....+....+.|+..||+|+..
T Consensus 64 ~Dvvf~a~~~~~--s~~~a~~~~~~G~~vID~Sa~~ 97 (344)
T 3tz6_A 64 LDIALFSAGSAM--SKVQAPRFAAAGVTVIDNSSAW 97 (344)
T ss_dssp CSEEEECSCHHH--HHHHHHHHHHTTCEEEECSSTT
T ss_pred CCEEEECCChHH--HHHHHHHHHhCCCEEEECCCcc
Confidence 999999998533 3677788889999999999853
|
| >1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=96.22 E-value=0.0037 Score=61.57 Aligned_cols=94 Identities=14% Similarity=0.237 Sum_probs=58.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC--h-hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN--P-TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs--~-~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
.+|-|.||||++|+.+++.|.++.. .++..+.-. . .++.++...+. .++.+ -++ |+++ +.+
T Consensus 14 ~~V~IvGAtG~vG~ellrlL~~hP~------~el~~l~S~~~aG~~~~~~~p~~~----~~l~~--~~~-~~~~---~~~ 77 (351)
T 1vkn_A 14 IRAGIIGATGYTGLELVRLLKNHPE------AKITYLSSRTYAGKKLEEIFPSTL----ENSIL--SEF-DPEK---VSK 77 (351)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHCTT------EEEEEEECSTTTTSBHHHHCGGGC----CCCBC--BCC-CHHH---HHH
T ss_pred eEEEEECCCCHHHHHHHHHHHcCCC------cEEEEEeCcccccCChHHhChhhc----cCceE--EeC-CHHH---hhc
Confidence 4799999999999999999998742 566554422 2 22322222121 11111 122 3333 347
Q ss_pred ccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcH
Q 014694 88 QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEP 124 (420)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~ 124 (420)
++|+||.|++-. ....++..+ .|+..||+|++.
T Consensus 78 ~~Dvvf~alp~~--~s~~~~~~~--~g~~VIDlSsdf 110 (351)
T 1vkn_A 78 NCDVLFTALPAG--ASYDLVREL--KGVKIIDLGADF 110 (351)
T ss_dssp HCSEEEECCSTT--HHHHHHTTC--CSCEEEESSSTT
T ss_pred CCCEEEECCCcH--HHHHHHHHh--CCCEEEECChhh
Confidence 899999988632 235555555 799999999863
|
| >2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A* | Back alignment and structure |
|---|
Probab=96.21 E-value=0.028 Score=53.97 Aligned_cols=108 Identities=16% Similarity=0.150 Sum_probs=69.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC--C-CCCCccEEEEeCCCHHHHHHHHh
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--S-HSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~--~-~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
|+|.|+|| |.+|+.++-.|+.++.. -++.+.+.++++.+-...+|.. . ......+... .|.+ .++
T Consensus 1 MKV~IiGa-G~VG~~~a~~l~~~~~~-----~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~--~d~~----~~~ 68 (294)
T 2x0j_A 1 MKLGFVGA-GRVGSTSAFTCLLNLDV-----DEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYS----LLK 68 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCC-----SEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEE--SCGG----GGT
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCC-----CEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecC--CCHH----HhC
Confidence 68999996 99999999998887631 4799999998877655554431 0 0112223322 2333 478
Q ss_pred ccCeeEeccCCCCCCc--------------HHHHHHHHHcCC--cEEecCCcHHHHHHH
Q 014694 88 QTKLLLNCVGPYRLHG--------------DPVAAACVHSGC--DYLDISGEPEFMERM 130 (420)
Q Consensus 88 ~~dvVIn~aGp~~~~~--------------~~vv~Ac~~~g~--~yvdisge~~~~~~~ 130 (420)
++|+||-+||.-...| ..+++++.+++- .++.+|-....+-.+
T Consensus 69 ~aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsNPvd~~t~i 127 (294)
T 2x0j_A 69 GSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPMDVMTYI 127 (294)
T ss_dssp TCSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSHHHHHHH
T ss_pred CCCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEecCcchhhHHh
Confidence 9999999999665544 445666666553 366666555544333
|
| >3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=96.19 E-value=0.042 Score=53.31 Aligned_cols=80 Identities=14% Similarity=0.088 Sum_probs=56.2
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcc-eEEEEecChhHHHHHHHHhCCC---CCCCccEEEEeCCCHHHHHHH
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIK-SLALAGRNPTRVKQALQWASPS---HSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~-~v~iagRs~~kl~~~~~~l~~~---~~~~~~~i~~D~~d~~sl~~~ 85 (420)
.++|.|+|| |.+|..++..|+..+ + ++.+.++++++++....++... ......+... .|. +.
T Consensus 5 ~~kI~iiGa-G~vG~~~a~~l~~~~-------~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t--~d~----~a 70 (321)
T 3p7m_A 5 RKKITLVGA-GNIGGTLAHLALIKQ-------LGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGT--NDY----KD 70 (321)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTT-------CCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCG----GG
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCC-------CceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEc--CCH----HH
Confidence 468999995 999999999998876 4 8999999998887655555320 0112333322 232 46
Q ss_pred HhccCeeEeccCCCCCCc
Q 014694 86 CSQTKLLLNCVGPYRLHG 103 (420)
Q Consensus 86 ~~~~dvVIn~aGp~~~~~ 103 (420)
++++|+||.++|.....|
T Consensus 71 ~~~aDvVIi~ag~p~k~G 88 (321)
T 3p7m_A 71 LENSDVVIVTAGVPRKPG 88 (321)
T ss_dssp GTTCSEEEECCSCCCCTT
T ss_pred HCCCCEEEEcCCcCCCCC
Confidence 889999999999655444
|
| >4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.18 E-value=0.034 Score=53.67 Aligned_cols=100 Identities=14% Similarity=0.113 Sum_probs=72.0
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceE-EEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v-~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
+++|.|+|+ |.+|+..++.|.+... .++ ++.+|++++.+++.++.+ +. ..| ++++++
T Consensus 3 ~~~vgiiG~-G~~g~~~~~~l~~~~~------~~l~av~d~~~~~~~~~~~~~~------~~-----~~~---~~~~l~~ 61 (331)
T 4hkt_A 3 TVRFGLLGA-GRIGKVHAKAVSGNAD------ARLVAVADAFPAAAEAIAGAYG------CE-----VRT---IDAIEAA 61 (331)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHCTT------EEEEEEECSSHHHHHHHHHHTT------CE-----ECC---HHHHHHC
T ss_pred ceEEEEECC-CHHHHHHHHHHhhCCC------cEEEEEECCCHHHHHHHHHHhC------CC-----cCC---HHHHhcC
Confidence 468999997 9999999999887631 565 478999999888877653 22 233 556666
Q ss_pred -ccCeeEeccCCCCCCcHHHHHHHHHcCCcEEe---cCCcHHHHHHHHH
Q 014694 88 -QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLD---ISGEPEFMERMEA 132 (420)
Q Consensus 88 -~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvd---isge~~~~~~~~~ 132 (420)
++|+|+.|..+.. ...++..|.++|.|.+- ++-...=.++|.+
T Consensus 62 ~~~D~V~i~tp~~~--h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~ 108 (331)
T 4hkt_A 62 ADIDAVVICTPTDT--HADLIERFARAGKAIFCEKPIDLDAERVRACLK 108 (331)
T ss_dssp TTCCEEEECSCGGG--HHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHH
T ss_pred CCCCEEEEeCCchh--HHHHHHHHHHcCCcEEEecCCCCCHHHHHHHHH
Confidence 7899998885543 36788889999998443 4555555666665
|
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* | Back alignment and structure |
|---|
Probab=96.18 E-value=0.0084 Score=58.78 Aligned_cols=73 Identities=18% Similarity=0.153 Sum_probs=56.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
-+|+|+|+ |.+|..+++.+...+ .+|++.++++++++.+.++++. . ...|..+.+.+.++..++|
T Consensus 182 ~~VlV~Ga-G~vG~~a~qlak~~G-------a~Vi~~~~~~~~~~~~~~~lGa------~-~vi~~~~~~~~~~~~~g~D 246 (357)
T 2cf5_A 182 LRGGILGL-GGVGHMGVKIAKAMG-------HHVTVISSSNKKREEALQDLGA------D-DYVIGSDQAKMSELADSLD 246 (357)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHT-------CEEEEEESSTTHHHHHHTTSCC------S-CEEETTCHHHHHHSTTTEE
T ss_pred CEEEEECC-CHHHHHHHHHHHHCC-------CeEEEEeCChHHHHHHHHHcCC------c-eeeccccHHHHHHhcCCCC
Confidence 47999996 899999999887777 7899999999988666545641 1 1346667666776666899
Q ss_pred eeEeccCC
Q 014694 91 LLLNCVGP 98 (420)
Q Consensus 91 vVIn~aGp 98 (420)
+||+++|.
T Consensus 247 ~vid~~g~ 254 (357)
T 2cf5_A 247 YVIDTVPV 254 (357)
T ss_dssp EEEECCCS
T ss_pred EEEECCCC
Confidence 99999984
|
| >1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A* | Back alignment and structure |
|---|
Probab=96.16 E-value=0.029 Score=55.80 Aligned_cols=95 Identities=19% Similarity=0.181 Sum_probs=59.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEE-E-EecChhHHHHHHHHhCCCCCCCccEE-EEeCCC---------
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLA-L-AGRNPTRVKQALQWASPSHSLSIPIL-TADTTD--------- 78 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~-i-agRs~~kl~~~~~~l~~~~~~~~~~i-~~D~~d--------- 78 (420)
.+|.|+|+||.+|+.+++-+.++.. .+++. + ++||.+++.+...+++ ++.+ ..|...
T Consensus 5 ~rI~ILGsTGSIG~~~l~vi~~~p~-----~~~v~al~ag~ni~~l~~~~~~f~------~~~v~v~d~~~~~~l~~~l~ 73 (388)
T 1r0k_A 5 RTVTVLGATGSIGHSTLDLIERNLD-----RYQVIALTANRNVKDLADAAKRTN------AKRAVIADPSLYNDLKEALA 73 (388)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTGG-----GEEEEEEEESSCHHHHHHHHHHTT------CSEEEESCGGGHHHHHHHTT
T ss_pred eEEEEECCCeEeHHHHHHHHHhCcC-----cEEEEEEEcCCCHHHHHHHHHHcC------CcEEEEcChHHHHHHHHHhc
Confidence 5799999999999999999887641 15553 4 7899999888877764 2322 233222
Q ss_pred ---------HHHHHHHHh-ccCeeEecc-CCCCCCcHHHHHHHHHcCCcEEe
Q 014694 79 ---------PPSLHRLCS-QTKLLLNCV-GPYRLHGDPVAAACVHSGCDYLD 119 (420)
Q Consensus 79 ---------~~sl~~~~~-~~dvVIn~a-Gp~~~~~~~vv~Ac~~~g~~yvd 119 (420)
.+.+.+++. .+|+|+++. |.. |.....+|+++|.|.+-
T Consensus 74 ~~~~~v~~g~~~~~el~~~~iDvVV~ai~G~a---Gl~ptlaAi~aGK~Vvl 122 (388)
T 1r0k_A 74 GSSVEAAAGADALVEAAMMGADWTMAAIIGCA---GLKATLAAIRKGKTVAL 122 (388)
T ss_dssp TCSSEEEESHHHHHHHHTSCCSEEEECCCSGG---GHHHHHHHHHTTSEEEE
T ss_pred cCCcEEEeCccHHHHHHcCCCCEEEEeCCCHH---HHHHHHHHHHCCCEEEE
Confidence 233334443 279999998 522 33444445555555444
|
| >4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major} | Back alignment and structure |
|---|
Probab=96.16 E-value=0.045 Score=53.67 Aligned_cols=91 Identities=14% Similarity=0.057 Sum_probs=56.2
Q ss_pred CCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh--hHHHHHHHHhCCCCCC-CccEEEEeCCCHHHHHH
Q 014694 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASPSHSL-SIPILTADTTDPPSLHR 84 (420)
Q Consensus 8 ~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~--~kl~~~~~~l~~~~~~-~~~~i~~D~~d~~sl~~ 84 (420)
..+.+|.|+||+|.||+.++-.|+...--+......+.+.+.++ .+++-+.-++..-... ...++..+ | ..+
T Consensus 22 ~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~--~---~~~ 96 (345)
T 4h7p_A 22 MSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTA--D---PRV 96 (345)
T ss_dssp CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEES--C---HHH
T ss_pred CCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcC--C---hHH
Confidence 34579999999999999999888775311101114789999865 3445444444210011 11222221 2 456
Q ss_pred HHhccCeeEeccCCCCCCc
Q 014694 85 LCSQTKLLLNCVGPYRLHG 103 (420)
Q Consensus 85 ~~~~~dvVIn~aGp~~~~~ 103 (420)
.++++|+||-++|.....|
T Consensus 97 a~~~advVvi~aG~prkpG 115 (345)
T 4h7p_A 97 AFDGVAIAIMCGAFPRKAG 115 (345)
T ss_dssp HTTTCSEEEECCCCCCCTT
T ss_pred HhCCCCEEEECCCCCCCCC
Confidence 7899999999999765544
|
| >1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* | Back alignment and structure |
|---|
Probab=96.16 E-value=0.015 Score=57.84 Aligned_cols=97 Identities=14% Similarity=0.217 Sum_probs=65.2
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCC-----------
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTT----------- 77 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~----------- 77 (420)
...+|+|+|+ |-+|..+++.+...+ .+|.+.+|+.++++.+.+ ++. .++..|..
T Consensus 171 ~g~~V~ViGa-G~iG~~aa~~a~~~G-------a~V~~~d~~~~~~~~~~~-~Ga------~~~~i~~~~~~~~~~~~~~ 235 (384)
T 1l7d_A 171 PPARVLVFGV-GVAGLQAIATAKRLG-------AVVMATDVRAATKEQVES-LGG------KFITVDDEAMKTAETAGGY 235 (384)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTT-------CEEEEECSCSTTHHHHHH-TTC------EECCC--------------
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHH-cCC------eEEeecccccccccccccc
Confidence 3458999996 999999999988887 689999999988866543 541 11101111
Q ss_pred -----------CHHHHHHHHhccCeeEecc---CCCC--CCcHHHHHHHHHcCCcEEecC
Q 014694 78 -----------DPPSLHRLCSQTKLLLNCV---GPYR--LHGDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 78 -----------d~~sl~~~~~~~dvVIn~a---Gp~~--~~~~~vv~Ac~~~g~~yvdis 121 (420)
+.+.+.+.++++|+||+|+ |.-. ......++.. +.|...+|++
T Consensus 236 ~~~~s~~~~~~~~~~l~~~~~~aDvVi~~~~~pg~~~~~li~~~~l~~m-k~g~vivdva 294 (384)
T 1l7d_A 236 AKEMGEEFRKKQAEAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKM-KPGSVIIDLA 294 (384)
T ss_dssp ---------CCHHHHHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTS-CTTCEEEETT
T ss_pred hhhcCHHHHhhhHHHHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcC-CCCCEEEEEe
Confidence 2344788889999999999 5211 1234444443 4566788887
|
| >1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A* | Back alignment and structure |
|---|
Probab=96.15 E-value=0.018 Score=57.77 Aligned_cols=97 Identities=15% Similarity=0.173 Sum_probs=65.6
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCC------------
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTT------------ 77 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~------------ 77 (420)
..+|+|+|+ |-+|..+++.+...+ .+|.+.+|+.++++.+ ++++ ..++..|..
T Consensus 172 g~~V~ViGa-G~iG~~aa~~a~~~G-------a~V~v~D~~~~~~~~~-~~lG------a~~~~~~~~~~~~~~~g~~~~ 236 (401)
T 1x13_A 172 PAKVMVIGA-GVAGLAAIGAANSLG-------AIVRAFDTRPEVKEQV-QSMG------AEFLELDFKEEAGSGDGYAKV 236 (401)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTT-------CEEEEECSCGGGHHHH-HHTT------CEECCC--------CCHHHHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCC-------CEEEEEcCCHHHHHHH-HHcC------CEEEEecccccccccccchhh
Confidence 457999997 999999999998887 7899999999988765 4453 122211211
Q ss_pred -CH-------HHHHHHHhccCeeEeccCC-C----CCCcHHHHHHHHHcCCcEEecCC
Q 014694 78 -DP-------PSLHRLCSQTKLLLNCVGP-Y----RLHGDPVAAACVHSGCDYLDISG 122 (420)
Q Consensus 78 -d~-------~sl~~~~~~~dvVIn~aGp-~----~~~~~~vv~Ac~~~g~~yvdisg 122 (420)
+. +.+.+.++++|+||++++. . .......++.+ +.|...||++-
T Consensus 237 ~~~~~~~~~~~~l~e~~~~aDvVI~~~~~pg~~ap~li~~~~l~~m-k~g~vIVdva~ 293 (401)
T 1x13_A 237 MSDAFIKAEMELFAAQAKEVDIIVTTALIPGKPAPKLITREMVDSM-KAGSVIVDLAA 293 (401)
T ss_dssp HSHHHHHHHHHHHHHHHHHCSEEEECCCCTTSCCCCCBCHHHHHTS-CTTCEEEETTG
T ss_pred ccHHHHHHHHHHHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcC-CCCcEEEEEcC
Confidence 11 2577888899999999632 1 11234555554 35677888873
|
| >3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A* | Back alignment and structure |
|---|
Probab=96.15 E-value=0.029 Score=54.86 Aligned_cols=104 Identities=13% Similarity=0.017 Sum_probs=72.5
Q ss_pred CCCcceEEEEcCCcHHHH-HHHHHHHHhCCCCCCCcceE-EEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHH
Q 014694 7 IPELFDVIILGASGFTGK-YVVREALKLFNFPSSPIKSL-ALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHR 84 (420)
Q Consensus 7 ~~~~~~IvV~GATG~~G~-~va~~L~~~~~~~~~~~~~v-~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~ 84 (420)
..++++|.|+|+ |.+|+ ..++.|.+... .++ ++++|+.++.+++.++.+ +..+ .++++
T Consensus 24 ~m~~~rigiIG~-G~~g~~~~~~~l~~~~~------~~l~av~d~~~~~~~~~a~~~g------~~~~-------~~~~~ 83 (350)
T 3rc1_A 24 NANPIRVGVIGC-ADIAWRRALPALEAEPL------TEVTAIASRRWDRAKRFTERFG------GEPV-------EGYPA 83 (350)
T ss_dssp --CCEEEEEESC-CHHHHHTHHHHHHHCTT------EEEEEEEESSHHHHHHHHHHHC------SEEE-------ESHHH
T ss_pred CCCceEEEEEcC-cHHHHHHHHHHHHhCCC------eEEEEEEcCCHHHHHHHHHHcC------CCCc-------CCHHH
Confidence 335689999986 89998 78888877531 565 588999999988887764 2222 23566
Q ss_pred HHh--ccCeeEeccCCCCCCcHHHHHHHHHcCCcEEe---cCCcHHHHHHHHH
Q 014694 85 LCS--QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLD---ISGEPEFMERMEA 132 (420)
Q Consensus 85 ~~~--~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvd---isge~~~~~~~~~ 132 (420)
+++ ++|+|+-|.-+.. ...++.+|.++|.|.+- ++-...=.++|++
T Consensus 84 ll~~~~~D~V~i~tp~~~--h~~~~~~al~aGk~Vl~EKP~a~~~~ea~~l~~ 134 (350)
T 3rc1_A 84 LLERDDVDAVYVPLPAVL--HAEWIDRALRAGKHVLAEKPLTTDRPQAERLFA 134 (350)
T ss_dssp HHTCTTCSEEEECCCGGG--HHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHH
T ss_pred HhcCCCCCEEEECCCcHH--HHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHH
Confidence 665 5899988775533 36788889999998443 5556666666665
|
| >1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=96.15 E-value=0.011 Score=56.18 Aligned_cols=99 Identities=18% Similarity=0.140 Sum_probs=66.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
.+++|+|+ |.+|+.++..|.+.+. .+|.++.|+.++.+++.++++ ..+ .+ + +. ..++|
T Consensus 120 ~~vlvlGa-Ggaarav~~~L~~~G~------~~i~v~nRt~~ka~~la~~~~------~~~--~~--~---~~--~~~~D 177 (271)
T 1npy_A 120 AKVIVHGS-GGMAKAVVAAFKNSGF------EKLKIYARNVKTGQYLAALYG------YAY--IN--S---LE--NQQAD 177 (271)
T ss_dssp SCEEEECS-STTHHHHHHHHHHTTC------CCEEEECSCHHHHHHHHHHHT------CEE--ES--C---CT--TCCCS
T ss_pred CEEEEECC-cHHHHHHHHHHHHCCC------CEEEEEeCCHHHHHHHHHHcC------Ccc--ch--h---hh--cccCC
Confidence 47999996 7799999999999872 379999999999998888774 111 11 1 11 35799
Q ss_pred eeEeccCCCCCC-----cHHHHHHHHHcCCcEEecCC---cHHHHHHHH
Q 014694 91 LLLNCVGPYRLH-----GDPVAAACVHSGCDYLDISG---EPEFMERME 131 (420)
Q Consensus 91 vVIn~aGp~~~~-----~~~vv~Ac~~~g~~yvdisg---e~~~~~~~~ 131 (420)
+||||....... ..++-..+...+...+|+.- +.++++...
T Consensus 178 ivInaTp~gm~~~~~~~~~~~~~~~l~~~~~v~DlvY~P~~T~ll~~A~ 226 (271)
T 1npy_A 178 ILVNVTSIGMKGGKEEMDLAFPKAFIDNASVAFDVVAMPVETPFIRYAQ 226 (271)
T ss_dssp EEEECSSTTCTTSTTTTSCSSCHHHHHHCSEEEECCCSSSSCHHHHHHH
T ss_pred EEEECCCCCccCccccCCCCCCHHHcCCCCEEEEeecCCCCCHHHHHHH
Confidence 999998743311 01222355666777888875 334544433
|
| >3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A* | Back alignment and structure |
|---|
Probab=96.14 E-value=0.018 Score=55.39 Aligned_cols=100 Identities=16% Similarity=0.172 Sum_probs=60.2
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC--C----CCCCccEEEEeCCCHHHHHHH
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--S----HSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~--~----~~~~~~~i~~D~~d~~sl~~~ 85 (420)
+|-++| .|..|..++++|++.+ ++|.+.+|++++.+.+.+.=.. . .....+++..=+.|.+.++++
T Consensus 5 kIgfIG-lG~MG~~mA~~L~~~G-------~~v~v~dr~~~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~V 76 (300)
T 3obb_A 5 QIAFIG-LGHMGAPMATNLLKAG-------YLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGL 76 (300)
T ss_dssp EEEEEC-CSTTHHHHHHHHHHTT-------CEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHH
T ss_pred EEEEee-ehHHHHHHHHHHHhCC-------CeEEEEcCCHHHHHHHHHcCCEEcCCHHHHHhcCCceeecCCchHHHHHH
Confidence 688887 5999999999999998 8999999999999877653110 0 011234444445555555555
Q ss_pred Hhcc----------CeeEeccCCCCCCcHHHHHHHHHcCCcEEe
Q 014694 86 CSQT----------KLLLNCVGPYRLHGDPVAAACVHSGCDYLD 119 (420)
Q Consensus 86 ~~~~----------dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvd 119 (420)
+.+. ++||++.-........+.+.+.+.|++|+|
T Consensus 77 ~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~~~lD 120 (300)
T 3obb_A 77 YLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLD 120 (300)
T ss_dssp HHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTCEEEE
T ss_pred HhchhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEe
Confidence 4321 233433322222234555555555666665
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A | Back alignment and structure |
|---|
Probab=96.14 E-value=0.013 Score=59.47 Aligned_cols=74 Identities=19% Similarity=0.196 Sum_probs=52.6
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCH----------
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDP---------- 79 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~---------- 79 (420)
.-.|+|+||+|.+|...++.+...+ .+++++++++++++.+ ++++. . ...|..+.
T Consensus 229 g~~VlV~GasG~vG~~avqlak~~G-------a~vi~~~~~~~~~~~~-~~lGa------~-~vi~~~~~d~~~~~~~~~ 293 (456)
T 3krt_A 229 GDNVLIWGASGGLGSYATQFALAGG-------ANPICVVSSPQKAEIC-RAMGA------E-AIIDRNAEGYRFWKDENT 293 (456)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTT-------CEEEEEESSHHHHHHH-HHHTC------C-EEEETTTTTCCSEEETTE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcC-------CeEEEEECCHHHHHHH-HhhCC------c-EEEecCcCcccccccccc
Confidence 3479999999999999999887777 7888888999998654 56652 1 12233321
Q ss_pred ----------HHHHHHHh--ccCeeEeccCC
Q 014694 80 ----------PSLHRLCS--QTKLLLNCVGP 98 (420)
Q Consensus 80 ----------~sl~~~~~--~~dvVIn~aGp 98 (420)
+.+.++.. ++|+||+|+|.
T Consensus 294 ~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G~ 324 (456)
T 3krt_A 294 QDPKEWKRFGKRIRELTGGEDIDIVFEHPGR 324 (456)
T ss_dssp ECHHHHHHHHHHHHHHHTSCCEEEEEECSCH
T ss_pred cchHHHHHHHHHHHHHhCCCCCcEEEEcCCc
Confidence 34444443 68999999984
|
| >1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A* | Back alignment and structure |
|---|
Probab=96.13 E-value=0.0022 Score=62.39 Aligned_cols=101 Identities=7% Similarity=-0.028 Sum_probs=67.0
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
...+++|+|++.-+|+.+++.|++.+ .+|.+++|+..++.+..+++. ...........++++++.+.+++
T Consensus 176 ~gk~vvVIG~G~iVG~~~A~~L~~~g-------AtVtv~nR~~~~l~~ra~~la---~~~~~~t~~~~t~~~~L~e~l~~ 245 (320)
T 1edz_A 176 YGKKCIVINRSEIVGRPLAALLANDG-------ATVYSVDVNNIQKFTRGESLK---LNKHHVEDLGEYSEDLLKKCSLD 245 (320)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTTS-------CEEEEECSSEEEEEESCCCSS---CCCCEEEEEEECCHHHHHHHHHH
T ss_pred CCCEEEEECCCcchHHHHHHHHHHCC-------CEEEEEeCchHHHHhHHHHHh---hhcccccccccccHhHHHHHhcc
Confidence 34589999998888999999999887 789999998655422222221 00011111222455789999999
Q ss_pred cCeeEeccCCCCC-CcHHHHHHHHHcCCcEEecCCc
Q 014694 89 TKLLLNCVGPYRL-HGDPVAAACVHSGCDYLDISGE 123 (420)
Q Consensus 89 ~dvVIn~aGp~~~-~~~~vv~Ac~~~g~~yvdisge 123 (420)
+|+||+++|--.. ..... ++.|+..||++-.
T Consensus 246 ADIVIsAtg~p~~vI~~e~----vk~GavVIDVgi~ 277 (320)
T 1edz_A 246 SDVVITGVPSENYKFPTEY----IKEGAVCINFACT 277 (320)
T ss_dssp CSEEEECCCCTTCCBCTTT----SCTTEEEEECSSS
T ss_pred CCEEEECCCCCcceeCHHH----cCCCeEEEEcCCC
Confidence 9999999985332 22122 2557899999754
|
| >1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=96.12 E-value=0.023 Score=55.54 Aligned_cols=104 Identities=13% Similarity=0.093 Sum_probs=65.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceE-EEEecChhHHHHHHHHhCCCCCCC----c-cEEEEeCCCHHHHHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNPTRVKQALQWASPSHSLS----I-PILTADTTDPPSLHR 84 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v-~iagRs~~kl~~~~~~l~~~~~~~----~-~~i~~D~~d~~sl~~ 84 (420)
++|.|.|+ |++|+.+++.|.++.. +++ .+.+++..........-+.+.... + .+-..++.=..+.++
T Consensus 2 ikVgIiGa-G~iG~~l~r~L~~~~~------~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~l~v~~~~~~ 74 (337)
T 1cf2_P 2 KAVAINGY-GTVGKRVADAIAQQDD------MKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDD 74 (337)
T ss_dssp EEEEEECC-STTHHHHHHHHHTSSS------EEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHH
T ss_pred eEEEEEeE-CHHHHHHHHHHHcCCC------cEEEEEEcCChhHHHHhcCCcchhhccccccceeeecCCceEEcCCHHH
Confidence 57999999 9999999999987641 565 456676555544443211000000 0 000000000013455
Q ss_pred HHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCc
Q 014694 85 LCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGE 123 (420)
Q Consensus 85 ~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge 123 (420)
++.++|+||-|++.+.. ...+..+.++|++.||.+++
T Consensus 75 ~~~~vDvV~~atp~~~~--~~~a~~~l~aG~~VId~sp~ 111 (337)
T 1cf2_P 75 MLDEADIVIDCTPEGIG--AKNLKMYKEKGIKAIFQGGE 111 (337)
T ss_dssp HHHTCSEEEECCSTTHH--HHHHHHHHHHTCCEEECTTS
T ss_pred HhcCCCEEEECCCchhh--HHHHHHHHHcCCEEEEecCC
Confidence 66799999999987533 56778899999999999987
|
| >3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=96.07 E-value=0.0054 Score=60.96 Aligned_cols=95 Identities=13% Similarity=0.148 Sum_probs=59.7
Q ss_pred cceEEEEcCCcHHHHHHHH-HHHHhCCCCCCCcceEEE-EecChhH-HHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 014694 10 LFDVIILGASGFTGKYVVR-EALKLFNFPSSPIKSLAL-AGRNPTR-VKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~-~L~~~~~~~~~~~~~v~i-agRs~~k-l~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
+++|-|+|||||+|+.+++ -|.++.- ...++.. +.|+..+ +.. +. .. ....-+..++++ +
T Consensus 4 ~~~VaIvGATG~vG~ellr~lL~~hp~----~~~~l~~~ss~~aG~~~~~----~~---~~--~~~v~~~~~~~~----~ 66 (377)
T 3uw3_A 4 SMNVGLVGWRGMVGSVLMQRMQEEGDF----DLIEPVFFSTSNAGGKAPS----FA---KN--ETTLKDATSIDD----L 66 (377)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGG----GGSEEEEEESSCTTSBCCT----TC---CS--CCBCEETTCHHH----H
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCC----CceEEEEEechhcCCCHHH----cC---CC--ceEEEeCCChhH----h
Confidence 5789999999999999999 5554430 0145544 4443222 111 11 11 122234545444 3
Q ss_pred hccCeeEeccCCCCCCcHHHHHHHHHcCC--cEEecCCc
Q 014694 87 SQTKLLLNCVGPYRLHGDPVAAACVHSGC--DYLDISGE 123 (420)
Q Consensus 87 ~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~--~yvdisge 123 (420)
+++|+||.|.|-+. ....+..+.++|+ ..||.++.
T Consensus 67 ~~vDvvf~a~~~~~--s~~~~~~~~~~G~k~~VID~ss~ 103 (377)
T 3uw3_A 67 KKCDVIITCQGGDY--TNDVFPKLRAAGWNGYWIDAASS 103 (377)
T ss_dssp HTCSEEEECSCHHH--HHHHHHHHHHTTCCSEEEECSST
T ss_pred cCCCEEEECCChHH--HHHHHHHHHHCCCCEEEEeCCcc
Confidence 68999999987533 3677778889997 79999984
|
| >3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1 | Back alignment and structure |
|---|
Probab=96.07 E-value=0.095 Score=51.01 Aligned_cols=81 Identities=14% Similarity=0.086 Sum_probs=55.2
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC--CCCCCccEEEEeCCCHHHHHHHH
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--SHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~--~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
+.++|.|+|| |.+|..++..|+..+-. .++.+.++++++++....++.. .......+... .|.+ . +
T Consensus 20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~-----~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t--~d~~---~-~ 87 (330)
T 3ldh_A 20 SYNKITVVGC-DAVGMADAISVLMKDLA-----DEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSG--KDYS---V-S 87 (330)
T ss_dssp CCCEEEEEST-THHHHHHHHHHHHHCCC-----SEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEE--SSSC---S-C
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCC-----CeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEc--CCHH---H-h
Confidence 4468999999 99999999999988720 2899999999888765544421 00111222222 2322 2 7
Q ss_pred hccCeeEeccCCCCC
Q 014694 87 SQTKLLLNCVGPYRL 101 (420)
Q Consensus 87 ~~~dvVIn~aGp~~~ 101 (420)
+++|+||-++|....
T Consensus 88 ~daDiVIitaG~p~k 102 (330)
T 3ldh_A 88 AGSKLVVITAGARQQ 102 (330)
T ss_dssp SSCSEEEECCSCCCC
T ss_pred CCCCEEEEeCCCCCC
Confidence 899999999996544
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=96.06 E-value=0.014 Score=56.99 Aligned_cols=72 Identities=15% Similarity=0.142 Sum_probs=51.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcc-eEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHH---HHHHHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIK-SLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPP---SLHRLC 86 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~-~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~---sl~~~~ 86 (420)
-+|+|+|| |.+|..+++.+...+ . +|++.+|++++++.+ ++++ .. ...|..+++ .+.++.
T Consensus 169 ~~VlV~Ga-G~vG~~~~q~a~~~G-------a~~Vi~~~~~~~~~~~~-~~~G------a~-~~~~~~~~~~~~~v~~~~ 232 (348)
T 2d8a_A 169 KSVLITGA-GPLGLLGIAVAKASG-------AYPVIVSEPSDFRRELA-KKVG------AD-YVINPFEEDVVKEVMDIT 232 (348)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTT-------CCSEEEECSCHHHHHHH-HHHT------CS-EEECTTTSCHHHHHHHHT
T ss_pred CEEEEECC-CHHHHHHHHHHHHcC-------CCEEEEECCCHHHHHHH-HHhC------CC-EEECCCCcCHHHHHHHHc
Confidence 46999999 999999999887776 5 899999999888554 4564 12 124555433 233333
Q ss_pred h--ccCeeEeccCC
Q 014694 87 S--QTKLLLNCVGP 98 (420)
Q Consensus 87 ~--~~dvVIn~aGp 98 (420)
. ++|+||+++|.
T Consensus 233 ~g~g~D~vid~~g~ 246 (348)
T 2d8a_A 233 DGNGVDVFLEFSGA 246 (348)
T ss_dssp TTSCEEEEEECSCC
T ss_pred CCCCCCEEEECCCC
Confidence 2 58999999983
|
| >3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A* | Back alignment and structure |
|---|
Probab=96.06 E-value=0.041 Score=53.47 Aligned_cols=80 Identities=13% Similarity=0.049 Sum_probs=54.3
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcc-eEEEEecChhHHHHHHHHhCC---CCCCCccEEEEeCCCHHHHHHH
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIK-SLALAGRNPTRVKQALQWASP---SHSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~-~v~iagRs~~kl~~~~~~l~~---~~~~~~~~i~~D~~d~~sl~~~ 85 (420)
.++|.|+|| |.+|..++..|+..+ + ++.+.++++++++....++.. .......+... .|. +.
T Consensus 7 ~~kI~viGa-G~vG~~~a~~l~~~~-------~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t--~d~----~a 72 (324)
T 3gvi_A 7 RNKIALIGS-GMIGGTLAHLAGLKE-------LGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGA--NDY----AA 72 (324)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTT-------CCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE--SSG----GG
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCC-------CCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEe--CCH----HH
Confidence 468999998 999999999998876 5 899999999887644433321 00012233222 232 46
Q ss_pred HhccCeeEeccCCCCCCc
Q 014694 86 CSQTKLLLNCVGPYRLHG 103 (420)
Q Consensus 86 ~~~~dvVIn~aGp~~~~~ 103 (420)
++++|+||.++|.....|
T Consensus 73 ~~~aDiVIiaag~p~k~G 90 (324)
T 3gvi_A 73 IEGADVVIVTAGVPRKPG 90 (324)
T ss_dssp GTTCSEEEECCSCCCC--
T ss_pred HCCCCEEEEccCcCCCCC
Confidence 789999999999655444
|
| >3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber} | Back alignment and structure |
|---|
Probab=96.05 E-value=0.026 Score=54.70 Aligned_cols=80 Identities=14% Similarity=0.107 Sum_probs=52.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC---CCCCCccEEEEeCCCHHHHHHHHh
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP---SHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~---~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
|+|.|+|| |.+|..++..|+..+-. -++.+.++++++++....++.. ....+..+...| + .+.++
T Consensus 1 Mkv~ViGa-G~vG~~~a~~l~~~~~~-----~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~----~~a~~ 68 (314)
T 3nep_X 1 MKVTVIGA-GNVGATVAECVARQDVA-----KEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--D----YGPTE 68 (314)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCS-----SEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--S----SGGGT
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCC-----CEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--C----HHHhC
Confidence 68999997 99999999999988620 2899999999887654444421 001122332222 2 24578
Q ss_pred ccCeeEeccCCCCCC
Q 014694 88 QTKLLLNCVGPYRLH 102 (420)
Q Consensus 88 ~~dvVIn~aGp~~~~ 102 (420)
++|+||.++|.....
T Consensus 69 ~aDvVii~ag~~~kp 83 (314)
T 3nep_X 69 DSDVCIITAGLPRSP 83 (314)
T ss_dssp TCSEEEECCCC----
T ss_pred CCCEEEECCCCCCCC
Confidence 999999999965443
|
| >3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=96.05 E-value=0.036 Score=53.66 Aligned_cols=103 Identities=12% Similarity=0.003 Sum_probs=72.7
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceE-EEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v-~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
++++|.|+|+ |.+|+..++.|.+... .++ ++++|+.++.+++.++.+. . . -..+++++++
T Consensus 4 ~~~~igiiG~-G~~g~~~~~~l~~~~~------~~l~av~d~~~~~~~~~~~~~~~---~--~-------~~~~~~~ll~ 64 (330)
T 3e9m_A 4 DKIRYGIMST-AQIVPRFVAGLRESAQ------AEVRGIASRRLENAQKMAKELAI---P--V-------AYGSYEELCK 64 (330)
T ss_dssp CCEEEEECSC-CTTHHHHHHHHHHSSS------EEEEEEBCSSSHHHHHHHHHTTC---C--C-------CBSSHHHHHH
T ss_pred CeEEEEEECc-hHHHHHHHHHHHhCCC------cEEEEEEeCCHHHHHHHHHHcCC---C--c-------eeCCHHHHhc
Confidence 4579999997 9999999999887641 565 4789999999888876641 0 0 1134566666
Q ss_pred --ccCeeEeccCCCCCCcHHHHHHHHHcCCcEEe---cCCcHHHHHHHHH
Q 014694 88 --QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLD---ISGEPEFMERMEA 132 (420)
Q Consensus 88 --~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvd---isge~~~~~~~~~ 132 (420)
++|+|+-|.-+... ..++..|.++|.|.+- ++-...=.++|++
T Consensus 65 ~~~~D~V~i~tp~~~h--~~~~~~al~~gk~vl~EKP~~~~~~e~~~l~~ 112 (330)
T 3e9m_A 65 DETIDIIYIPTYNQGH--YSAAKLALSQGKPVLLEKPFTLNAAEAEELFA 112 (330)
T ss_dssp CTTCSEEEECCCGGGH--HHHHHHHHHTTCCEEECSSCCSSHHHHHHHHH
T ss_pred CCCCCEEEEcCCCHHH--HHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHH
Confidence 78999988765433 6778889999998543 4555555566655
|
| >2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.04 E-value=0.014 Score=56.47 Aligned_cols=94 Identities=12% Similarity=0.097 Sum_probs=66.9
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHh-CCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 10 LFDVIILGASGFTGKYVVREALKL-FNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~-~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
.++|.|+|+ |.+|+.+++.|++. +. .+|.+.+|++++.+++.++++ . .+..+ +++++++++
T Consensus 135 ~~~igiIG~-G~~g~~~a~~l~~~~g~------~~V~v~dr~~~~~~~l~~~~~----~--~~~~~-----~~~~e~v~~ 196 (312)
T 2i99_A 135 SEVLCILGA-GVQAYSHYEIFTEQFSF------KEVRIWNRTKENAEKFADTVQ----G--EVRVC-----SSVQEAVAG 196 (312)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHCCC------SEEEEECSSHHHHHHHHHHSS----S--CCEEC-----SSHHHHHTT
T ss_pred CcEEEEECC-cHHHHHHHHHHHHhCCC------cEEEEEcCCHHHHHHHHHHhh----C--CeEEe-----CCHHHHHhc
Confidence 457999986 99999999999886 41 389999999999988887663 1 11221 346677889
Q ss_pred cCeeEeccCCCCCCcHHHHH-HHHHcCCcEEecCCcHH
Q 014694 89 TKLLLNCVGPYRLHGDPVAA-ACVHSGCDYLDISGEPE 125 (420)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~-Ac~~~g~~yvdisge~~ 125 (420)
+|+||.|.... .++++ .+.+.|+|.++++...+
T Consensus 197 aDiVi~atp~~----~~v~~~~~l~~g~~vi~~g~~~p 230 (312)
T 2i99_A 197 ADVIITVTLAT----EPILFGEWVKPGAHINAVGASRP 230 (312)
T ss_dssp CSEEEECCCCS----SCCBCGGGSCTTCEEEECCCCST
T ss_pred CCEEEEEeCCC----CcccCHHHcCCCcEEEeCCCCCC
Confidence 99999988522 23332 35567889999854433
|
| >3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=96.04 E-value=0.011 Score=54.89 Aligned_cols=71 Identities=17% Similarity=0.241 Sum_probs=52.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
++|.|+| .|.+|..+++.|.+.+.. ...+|.+.+|++++++.+.++.+ +. . ..+ ..++++++|
T Consensus 3 ~~i~iIG-~G~mG~~~a~~l~~~g~~---~~~~V~~~~r~~~~~~~~~~~~g------~~--~--~~~---~~e~~~~aD 65 (247)
T 3gt0_A 3 KQIGFIG-CGNMGMAMIGGMINKNIV---SSNQIICSDLNTANLKNASEKYG------LT--T--TTD---NNEVAKNAD 65 (247)
T ss_dssp CCEEEEC-CSHHHHHHHHHHHHTTSS---CGGGEEEECSCHHHHHHHHHHHC------CE--E--CSC---HHHHHHHCS
T ss_pred CeEEEEC-ccHHHHHHHHHHHhCCCC---CCCeEEEEeCCHHHHHHHHHHhC------CE--E--eCC---hHHHHHhCC
Confidence 5799998 599999999999998710 00289999999999988876653 11 1 223 455677899
Q ss_pred eeEeccCC
Q 014694 91 LLLNCVGP 98 (420)
Q Consensus 91 vVIn~aGp 98 (420)
+||-|+-|
T Consensus 66 vVilav~~ 73 (247)
T 3gt0_A 66 ILILSIKP 73 (247)
T ss_dssp EEEECSCT
T ss_pred EEEEEeCH
Confidence 99999944
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=96.03 E-value=0.014 Score=56.61 Aligned_cols=73 Identities=12% Similarity=0.004 Sum_probs=52.9
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHH---HHHHHH
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPP---SLHRLC 86 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~---sl~~~~ 86 (420)
..+|+|+|| |.+|..+++.+...+ .+|++.+|++++++.+ ++++ .. ..+|..+.+ .+.++.
T Consensus 165 g~~VlV~Ga-G~vG~~~~~~a~~~G-------a~Vi~~~~~~~~~~~~-~~lG------a~-~~~d~~~~~~~~~~~~~~ 228 (339)
T 1rjw_A 165 GEWVAIYGI-GGLGHVAVQYAKAMG-------LNVVAVDIGDEKLELA-KELG------AD-LVVNPLKEDAAKFMKEKV 228 (339)
T ss_dssp TCEEEEECC-STTHHHHHHHHHHTT-------CEEEEECSCHHHHHHH-HHTT------CS-EEECTTTSCHHHHHHHHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHH-HHCC------CC-EEecCCCccHHHHHHHHh
Confidence 347999999 679999999888777 7899999999998655 4554 12 235666433 333333
Q ss_pred hccCeeEeccCC
Q 014694 87 SQTKLLLNCVGP 98 (420)
Q Consensus 87 ~~~dvVIn~aGp 98 (420)
.++|+||+++|.
T Consensus 229 ~~~d~vid~~g~ 240 (339)
T 1rjw_A 229 GGVHAAVVTAVS 240 (339)
T ss_dssp SSEEEEEESSCC
T ss_pred CCCCEEEECCCC
Confidence 578999999983
|
| >3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=96.03 E-value=0.02 Score=54.39 Aligned_cols=71 Identities=10% Similarity=0.118 Sum_probs=53.7
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
.++|.|+|+ |.+|..+++.|++.+.+ ..+|.+.+|++++++++.++++ +. .. .+..+.++++
T Consensus 3 ~~~I~iIG~-G~mG~aia~~l~~~g~~----~~~V~v~dr~~~~~~~l~~~~g------i~--~~-----~~~~~~~~~a 64 (280)
T 3tri_A 3 TSNITFIGG-GNMARNIVVGLIANGYD----PNRICVTNRSLDKLDFFKEKCG------VH--TT-----QDNRQGALNA 64 (280)
T ss_dssp CSCEEEESC-SHHHHHHHHHHHHTTCC----GGGEEEECSSSHHHHHHHHTTC------CE--EE-----SCHHHHHSSC
T ss_pred CCEEEEEcc-cHHHHHHHHHHHHCCCC----CCeEEEEeCCHHHHHHHHHHcC------CE--Ee-----CChHHHHhcC
Confidence 367999987 99999999999998711 1389999999999988876442 22 11 1245677899
Q ss_pred CeeEeccCC
Q 014694 90 KLLLNCVGP 98 (420)
Q Consensus 90 dvVIn~aGp 98 (420)
|+||-++-|
T Consensus 65 DvVilav~p 73 (280)
T 3tri_A 65 DVVVLAVKP 73 (280)
T ss_dssp SEEEECSCG
T ss_pred CeEEEEeCH
Confidence 999999965
|
| >1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A* | Back alignment and structure |
|---|
Probab=96.02 E-value=0.012 Score=57.27 Aligned_cols=79 Identities=8% Similarity=0.017 Sum_probs=54.3
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC---CCCCCccEEEEeCCCHHHHHHHH
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP---SHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~---~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
.++|.|+|| |.+|..++..|+..+- .+|.+.++++++++.....+.. .......+... +| . +.+
T Consensus 4 ~~kI~VIGa-G~vG~~ia~~la~~g~------~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t--~d---~-~al 70 (322)
T 1t2d_A 4 KAKIVLVGS-GMIGGVMATLIVQKNL------GDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS--NT---Y-DDL 70 (322)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTC------CEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEE--CC---G-GGG
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC------CeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEEC--CC---H-HHh
Confidence 468999998 9999999999998761 3799999999888765544421 00112222221 23 2 457
Q ss_pred hccCeeEeccCCCCC
Q 014694 87 SQTKLLLNCVGPYRL 101 (420)
Q Consensus 87 ~~~dvVIn~aGp~~~ 101 (420)
+++|+||.++|....
T Consensus 71 ~~aD~Vi~a~g~p~k 85 (322)
T 1t2d_A 71 AGADVVIVTAGFTKA 85 (322)
T ss_dssp TTCSEEEECCSCSSC
T ss_pred CCCCEEEEeCCCCCC
Confidence 899999999985443
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.02 E-value=0.016 Score=57.16 Aligned_cols=72 Identities=13% Similarity=0.119 Sum_probs=54.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
-+|+|+|+ |.+|..+++.+...+ .+|++.++++++++.+ ++++. . ...|..+.+.++++..++|
T Consensus 196 ~~VlV~Ga-G~vG~~aiqlak~~G-------a~Vi~~~~~~~~~~~a-~~lGa------~-~vi~~~~~~~~~~~~~g~D 259 (369)
T 1uuf_A 196 KKVGVVGI-GGLGHMGIKLAHAMG-------AHVVAFTTSEAKREAA-KALGA------D-EVVNSRNADEMAAHLKSFD 259 (369)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT-------CEEEEEESSGGGHHHH-HHHTC------S-EEEETTCHHHHHTTTTCEE
T ss_pred CEEEEECC-CHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHH-HHcCC------c-EEeccccHHHHHHhhcCCC
Confidence 47999998 789999998877776 6899999999998654 45641 2 2357777665555556899
Q ss_pred eeEeccCC
Q 014694 91 LLLNCVGP 98 (420)
Q Consensus 91 vVIn~aGp 98 (420)
+||+++|.
T Consensus 260 vvid~~g~ 267 (369)
T 1uuf_A 260 FILNTVAA 267 (369)
T ss_dssp EEEECCSS
T ss_pred EEEECCCC
Confidence 99999984
|
| >1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A* | Back alignment and structure |
|---|
Probab=96.01 E-value=0.012 Score=58.42 Aligned_cols=96 Identities=14% Similarity=0.159 Sum_probs=59.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEe-cChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAG-RNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iag-Rs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
++|.|.||||++|+.+++.++.+.+ . +...+.++. |+..+. + ..+. +..+...|..|++.+ +++
T Consensus 2 ~kVaIvGAtG~vG~~llr~ll~~~~--~-~~v~i~~~~~~s~G~~--v-~~~~-----g~~i~~~~~~~~~~~----~~~ 66 (367)
T 1t4b_A 2 QNVGFIGWRGMVGSVLMQRMVEERD--F-DAIRPVFFSTSQLGQA--A-PSFG-----GTTGTLQDAFDLEAL----KAL 66 (367)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTG--G-GGSEEEEEESSSTTSB--C-CGGG-----TCCCBCEETTCHHHH----HTC
T ss_pred cEEEEECCCCHHHHHHHHHHHhcCC--C-CeEEEEEEEeCCCCCC--c-cccC-----CCceEEEecCChHHh----cCC
Confidence 4799999999999999995554331 0 013444443 332220 0 0110 123334455565543 589
Q ss_pred CeeEeccCCCCCCcHHHHHHHHHcCC--cEEecCCc
Q 014694 90 KLLLNCVGPYRLHGDPVAAACVHSGC--DYLDISGE 123 (420)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~Ac~~~g~--~yvdisge 123 (420)
|+||.|.|.+ .....+....++|+ ..||.++.
T Consensus 67 DvVf~a~g~~--~s~~~a~~~~~~G~k~vVID~ss~ 100 (367)
T 1t4b_A 67 DIIVTCQGGD--YTNEIYPKLRESGWQGYWIDAASS 100 (367)
T ss_dssp SEEEECSCHH--HHHHHHHHHHHTTCCCEEEECSST
T ss_pred CEEEECCCch--hHHHHHHHHHHCCCCEEEEcCChh
Confidence 9999999853 24677888889998 68998875
|
| >3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=95.99 E-value=0.013 Score=55.64 Aligned_cols=98 Identities=15% Similarity=0.225 Sum_probs=64.4
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
++|.|+| .|.+|..+++.|++.+ ++|.+.+|++++.+.+.+. + +. . . .++.++++++|
T Consensus 2 ~~I~iiG-~G~mG~~~a~~l~~~G-------~~V~~~dr~~~~~~~~~~~-g------~~--~--~---~~~~~~~~~ad 59 (287)
T 3pdu_A 2 TTYGFLG-LGIMGGPMAANLVRAG-------FDVTVWNRNPAKCAPLVAL-G------AR--Q--A---SSPAEVCAACD 59 (287)
T ss_dssp CCEEEEC-CSTTHHHHHHHHHHHT-------CCEEEECSSGGGGHHHHHH-T------CE--E--C---SCHHHHHHHCS
T ss_pred CeEEEEc-cCHHHHHHHHHHHHCC-------CeEEEEcCCHHHHHHHHHC-C------Ce--e--c---CCHHHHHHcCC
Confidence 3689998 5999999999999998 7899999999998776653 1 11 1 1 23566777899
Q ss_pred eeEeccCCCCCCcHHHH---HH---HHHcCCcEEecCCc-HHHHHHHH
Q 014694 91 LLLNCVGPYRLHGDPVA---AA---CVHSGCDYLDISGE-PEFMERME 131 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv---~A---c~~~g~~yvdisge-~~~~~~~~ 131 (420)
+||.|+..... -..++ +. ....+..+||.|.- +...+++.
T Consensus 60 vvi~~v~~~~~-~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~ 106 (287)
T 3pdu_A 60 ITIAMLADPAA-AREVCFGANGVLEGIGGGRGYIDMSTVDDETSTAIG 106 (287)
T ss_dssp EEEECCSSHHH-HHHHHHSTTCGGGTCCTTCEEEECSCCCHHHHHHHH
T ss_pred EEEEEcCCHHH-HHHHHcCchhhhhcccCCCEEEECCCCCHHHHHHHH
Confidence 99998864211 12222 11 12345568888754 44444443
|
| >1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=95.97 E-value=0.077 Score=51.25 Aligned_cols=76 Identities=14% Similarity=0.051 Sum_probs=53.4
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcc--eEEEEecChhHHHHHHHHhCC--CCCCCccEEEEeCCCHHHHHHHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIK--SLALAGRNPTRVKQALQWASP--SHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~--~v~iagRs~~kl~~~~~~l~~--~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
|+|.|+|+ |.+|..++..|++.+ + +|.+.+|++++++.+...+.. +......+ .. +|.+ .+
T Consensus 1 mkI~VIGa-G~~G~~la~~l~~~g-------~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i-~~--~d~~----~~ 65 (319)
T 1a5z_A 1 MKIGIVGL-GRVGSSTAFALLMKG-------FAREMVLIDVDKKRAEGDALDLIHGTPFTRRANI-YA--GDYA----DL 65 (319)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHT-------CCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEE-EE--CCGG----GG
T ss_pred CEEEEECC-CHHHHHHHHHHHhCC-------CCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEE-Ee--CCHH----Hh
Confidence 57999998 999999999999987 5 899999999888776543310 00011122 22 2432 46
Q ss_pred hccCeeEeccCCCCC
Q 014694 87 SQTKLLLNCVGPYRL 101 (420)
Q Consensus 87 ~~~dvVIn~aGp~~~ 101 (420)
+++|+||.+++....
T Consensus 66 ~~aDvViiav~~~~~ 80 (319)
T 1a5z_A 66 KGSDVVIVAAGVPQK 80 (319)
T ss_dssp TTCSEEEECCCCCCC
T ss_pred CCCCEEEEccCCCCC
Confidence 899999999986553
|
| >4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* | Back alignment and structure |
|---|
Probab=95.93 E-value=0.0084 Score=56.95 Aligned_cols=81 Identities=12% Similarity=0.079 Sum_probs=53.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC-----------CCCCCccEEEEeCCCH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-----------SHSLSIPILTADTTDP 79 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~-----------~~~~~~~~i~~D~~d~ 79 (420)
.+|.|+|+ |.+|..+++.|++.+ ++|.+.+|++++++...+.+.. .......-....+.-.
T Consensus 5 ~kV~VIGa-G~mG~~iA~~la~~G-------~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~ 76 (283)
T 4e12_A 5 TNVTVLGT-GVLGSQIAFQTAFHG-------FAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYS 76 (283)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT-------CEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCC-------CeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEe
Confidence 47999986 999999999999988 8999999999988777654210 0000000000000011
Q ss_pred HHHHHHHhccCeeEeccCCC
Q 014694 80 PSLHRLCSQTKLLLNCVGPY 99 (420)
Q Consensus 80 ~sl~~~~~~~dvVIn~aGp~ 99 (420)
.++.+.++++|+||.++.+.
T Consensus 77 ~~~~~~~~~aDlVi~av~~~ 96 (283)
T 4e12_A 77 DDLAQAVKDADLVIEAVPES 96 (283)
T ss_dssp SCHHHHTTTCSEEEECCCSC
T ss_pred CCHHHHhccCCEEEEeccCc
Confidence 33566788999999999754
|
| >1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A* | Back alignment and structure |
|---|
Probab=95.93 E-value=0.04 Score=53.09 Aligned_cols=79 Identities=11% Similarity=0.067 Sum_probs=53.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCC---CCCCccEEEEeCCCHHHHHHHHh
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS---HSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~---~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
++|.|+|| |++|..++..|+..+. .++.+.++++++++....++... ......+... +|. +.++
T Consensus 3 ~kI~VIGa-G~vG~~~a~~la~~g~------~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~----~a~~ 69 (309)
T 1ur5_A 3 KKISIIGA-GFVGSTTAHWLAAKEL------GDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NNY----ADTA 69 (309)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC------SEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCG----GGGT
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCC------CeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEEC--CCH----HHHC
Confidence 58999999 9999999999988761 37999999998887655555310 0112233221 232 3478
Q ss_pred ccCeeEeccCCCCCC
Q 014694 88 QTKLLLNCVGPYRLH 102 (420)
Q Consensus 88 ~~dvVIn~aGp~~~~ 102 (420)
++|+||.++|.-...
T Consensus 70 ~aD~Vi~a~g~p~~~ 84 (309)
T 1ur5_A 70 NSDVIVVTSGAPRKP 84 (309)
T ss_dssp TCSEEEECCCC----
T ss_pred CCCEEEEcCCCCCCC
Confidence 999999999865443
|
| >1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A | Back alignment and structure |
|---|
Probab=95.92 E-value=0.035 Score=54.39 Aligned_cols=108 Identities=13% Similarity=0.065 Sum_probs=70.6
Q ss_pred CCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceE-EEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 014694 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 7 ~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v-~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~ 85 (420)
+.++++|.|+|+ |.+|+..++.|.+... .++ ++++|+.++.+++.++.+. ..... . . .+++++
T Consensus 3 ~~~~~~vgiiG~-G~ig~~~~~~l~~~~~------~~lv~v~d~~~~~~~~~a~~~~~--~~~~~--~--~---~~~~~l 66 (362)
T 1ydw_A 3 TETQIRIGVMGC-ADIARKVSRAIHLAPN------ATISGVASRSLEKAKAFATANNY--PESTK--I--H---GSYESL 66 (362)
T ss_dssp ---CEEEEEESC-CTTHHHHHHHHHHCTT------EEEEEEECSSHHHHHHHHHHTTC--CTTCE--E--E---SSHHHH
T ss_pred CCCceEEEEECc-hHHHHHHHHHHhhCCC------cEEEEEEcCCHHHHHHHHHHhCC--CCCCe--e--e---CCHHHH
Confidence 446689999997 9999999998877531 554 7889999998888776641 00111 1 1 235666
Q ss_pred Hh--ccCeeEeccCCCCCCcHHHHHHHHHcCCcEE-e--cCCcHHHHHHHHH
Q 014694 86 CS--QTKLLLNCVGPYRLHGDPVAAACVHSGCDYL-D--ISGEPEFMERMEA 132 (420)
Q Consensus 86 ~~--~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yv-d--isge~~~~~~~~~ 132 (420)
++ ++|+|+-|..+.. ...++.+|.++|.|.+ . ++-...=.++|++
T Consensus 67 l~~~~~D~V~i~tp~~~--h~~~~~~al~aGk~V~~EKP~a~~~~e~~~l~~ 116 (362)
T 1ydw_A 67 LEDPEIDALYVPLPTSL--HVEWAIKAAEKGKHILLEKPVAMNVTEFDKIVD 116 (362)
T ss_dssp HHCTTCCEEEECCCGGG--HHHHHHHHHTTTCEEEECSSCSSSHHHHHHHHH
T ss_pred hcCCCCCEEEEcCChHH--HHHHHHHHHHCCCeEEEecCCcCCHHHHHHHHH
Confidence 65 5899998875433 2577888899999844 3 3334444555555
|
| >4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=95.92 E-value=0.007 Score=55.28 Aligned_cols=67 Identities=13% Similarity=0.156 Sum_probs=51.4
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEE-EecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLAL-AGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~i-agRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
++|.|+| +|.+|..+++.|++.+ ++|.+ .+|++++++++.++++ +... . ++. +.++++
T Consensus 24 mkI~IIG-~G~mG~~la~~l~~~g-------~~V~~v~~r~~~~~~~l~~~~g------~~~~-~--~~~----~~~~~a 82 (220)
T 4huj_A 24 TTYAIIG-AGAIGSALAERFTAAQ-------IPAIIANSRGPASLSSVTDRFG------ASVK-A--VEL----KDALQA 82 (220)
T ss_dssp CCEEEEE-CHHHHHHHHHHHHHTT-------CCEEEECTTCGGGGHHHHHHHT------TTEE-E--CCH----HHHTTS
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCC-------CEEEEEECCCHHHHHHHHHHhC------CCcc-c--ChH----HHHhcC
Confidence 6899999 6999999999999987 67877 8999999988877664 2222 1 222 236789
Q ss_pred CeeEeccCC
Q 014694 90 KLLLNCVGP 98 (420)
Q Consensus 90 dvVIn~aGp 98 (420)
|+||-++-+
T Consensus 83 DvVilavp~ 91 (220)
T 4huj_A 83 DVVILAVPY 91 (220)
T ss_dssp SEEEEESCG
T ss_pred CEEEEeCCh
Confidence 999999854
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=95.91 E-value=0.021 Score=58.29 Aligned_cols=102 Identities=14% Similarity=0.205 Sum_probs=77.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-Hhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~-~~~~ 89 (420)
.+|+|.|| |-+|..+++.|.+ . +++.+..++.++.+.+.+++. +..++.+|.+|++-|++. +.++
T Consensus 236 ~~v~I~Gg-G~ig~~lA~~L~~-~-------~~v~iIE~d~~r~~~la~~l~-----~~~Vi~GD~td~~~L~ee~i~~~ 301 (461)
T 4g65_A 236 RRIMIVGG-GNIGASLAKRLEQ-T-------YSVKLIERNLQRAEKLSEELE-----NTIVFCGDAADQELLTEENIDQV 301 (461)
T ss_dssp CEEEEECC-SHHHHHHHHHHTT-T-------SEEEEEESCHHHHHHHHHHCT-----TSEEEESCTTCHHHHHHTTGGGC
T ss_pred cEEEEEcc-hHHHHHHHHHhhh-c-------CceEEEecCHHHHHHHHHHCC-----CceEEeccccchhhHhhcCchhh
Confidence 36888886 8899999999743 2 689999999999999998873 577899999999988886 7899
Q ss_pred CeeEeccCCCCCCcHHHH--HHHHHcCCc-EEecCCcHHHHHH
Q 014694 90 KLLLNCVGPYRLHGDPVA--AACVHSGCD-YLDISGEPEFMER 129 (420)
Q Consensus 90 dvVIn~aGp~~~~~~~vv--~Ac~~~g~~-yvdisge~~~~~~ 129 (420)
|++|.+.+- .-.|++ -.|++.|++ -+-.-..+.+.+-
T Consensus 302 D~~ia~T~~---De~Ni~~~llAk~~gv~kvIa~vn~~~~~~l 341 (461)
T 4g65_A 302 DVFIALTNE---DETNIMSAMLAKRMGAKKVMVLIQRGAYVDL 341 (461)
T ss_dssp SEEEECCSC---HHHHHHHHHHHHHTTCSEEEEECSCHHHHHH
T ss_pred cEEEEcccC---cHHHHHHHHHHHHcCCccccccccccchhhh
Confidence 999988763 224444 345677874 4444455555443
|
| >3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A | Back alignment and structure |
|---|
Probab=95.89 E-value=0.0065 Score=60.27 Aligned_cols=95 Identities=16% Similarity=0.131 Sum_probs=58.4
Q ss_pred ceEEEEcCCcHHHHHHHH-HHHHhCCCCCCCcceEEE-EecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 11 FDVIILGASGFTGKYVVR-EALKLFNFPSSPIKSLAL-AGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~-~L~~~~~~~~~~~~~v~i-agRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
|+|-|.|||||+|+.+++ -|.++.- ...++.. +.|+..+. + .++. .. ....-|..++++ +++
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~----~~~~l~~~ss~~aG~~--~-~~~~---~~--~~~~~~~~~~~~----~~~ 64 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDF----DLIEPVFFSTSQIGVP--A-PNFG---KD--AGMLHDAFDIES----LKQ 64 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGG----GGSEEEEEESSSTTSB--C-CCSS---SC--CCBCEETTCHHH----HTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCC----CceEEEEEeccccCcC--H-HHhC---CC--ceEEEecCChhH----hcc
Confidence 579999999999999999 5554430 0145443 44442221 0 0011 11 122234444443 478
Q ss_pred cCeeEeccCCCCCCcHHHHHHHHHcCC--cEEecCCc
Q 014694 89 TKLLLNCVGPYRLHGDPVAAACVHSGC--DYLDISGE 123 (420)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~Ac~~~g~--~yvdisge 123 (420)
+|+||.|.|.+. ....+....+.|+ ..||.++.
T Consensus 65 ~Dvvf~a~~~~~--s~~~~~~~~~~G~k~~VID~ss~ 99 (370)
T 3pzr_A 65 LDAVITCQGGSY--TEKVYPALRQAGWKGYWIDAAST 99 (370)
T ss_dssp CSEEEECSCHHH--HHHHHHHHHHTTCCCEEEECSST
T ss_pred CCEEEECCChHH--HHHHHHHHHHCCCCEEEEeCCch
Confidence 999999987533 3677777888896 69999974
|
| >2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=95.89 E-value=0.0038 Score=61.03 Aligned_cols=94 Identities=17% Similarity=0.086 Sum_probs=57.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEE-EecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLAL-AGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~i-agRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
|+|.|.||||++|+.+++.|.+++.+. ..+.. ..++... +.+. ..+..+...+. |++. + ++
T Consensus 1 mkVaI~GAtG~iG~~llr~L~~~~~~~----~~l~~~~s~~~~g-----~~l~---~~g~~i~v~~~-~~~~----~-~~ 62 (331)
T 2yv3_A 1 MRVAVVGATGAVGREILKVLEARNFPL----SELRLYASPRSAG-----VRLA---FRGEEIPVEPL-PEGP----L-PV 62 (331)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCC----SCCEEEECGGGSS-----CEEE---ETTEEEEEEEC-CSSC----C-CC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCc----EEEEEeeccccCC-----CEEE---EcCceEEEEeC-Chhh----c-CC
Confidence 579999999999999999998654211 23332 2221110 0000 00112222233 3332 3 89
Q ss_pred CeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcH
Q 014694 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEP 124 (420)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~ 124 (420)
|+||.|.|.+. ....+....+.|+..||+|++.
T Consensus 63 DvV~~a~g~~~--s~~~a~~~~~~G~~vId~s~~~ 95 (331)
T 2yv3_A 63 DLVLASAGGGI--SRAKALVWAEGGALVVDNSSAW 95 (331)
T ss_dssp SEEEECSHHHH--HHHHHHHHHHTTCEEEECSSSS
T ss_pred CEEEECCCccc--hHHHHHHHHHCCCEEEECCCcc
Confidence 99999998643 3667788889999999999874
|
| >3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp} | Back alignment and structure |
|---|
Probab=95.88 E-value=0.038 Score=53.18 Aligned_cols=70 Identities=9% Similarity=0.099 Sum_probs=50.5
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcc-eEEEEecC--hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIK-SLALAGRN--PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~-~v~iagRs--~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~ 85 (420)
..++|.|+|. |.+|..+++.|++.+ + +|.+.+|+ +++.+.+.+ .+ +. . . .++.++
T Consensus 23 ~~~~I~iIG~-G~mG~~~A~~L~~~G-------~~~V~~~dr~~~~~~~~~~~~-~g------~~--~--~---~~~~e~ 80 (312)
T 3qsg_A 23 NAMKLGFIGF-GEAASAIASGLRQAG-------AIDMAAYDAASAESWRPRAEE-LG------VS--C--K---ASVAEV 80 (312)
T ss_dssp --CEEEEECC-SHHHHHHHHHHHHHS-------CCEEEEECSSCHHHHHHHHHH-TT------CE--E--C---SCHHHH
T ss_pred CCCEEEEECc-cHHHHHHHHHHHHCC-------CCeEEEEcCCCCHHHHHHHHH-CC------CE--E--e---CCHHHH
Confidence 3468999985 999999999999998 6 89999997 466654433 22 11 1 1 235567
Q ss_pred HhccCeeEeccCCCC
Q 014694 86 CSQTKLLLNCVGPYR 100 (420)
Q Consensus 86 ~~~~dvVIn~aGp~~ 100 (420)
++++|+||-|+.+..
T Consensus 81 ~~~aDvVi~~vp~~~ 95 (312)
T 3qsg_A 81 AGECDVIFSLVTAQA 95 (312)
T ss_dssp HHHCSEEEECSCTTT
T ss_pred HhcCCEEEEecCchh
Confidence 788999999997643
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=95.88 E-value=0.021 Score=55.62 Aligned_cols=71 Identities=14% Similarity=0.098 Sum_probs=50.2
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCH---HHHHHHH
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDP---PSLHRLC 86 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~---~sl~~~~ 86 (420)
.-+|+|+||+|.+|..+++.+...+ .+|++. ++.++++. +++++ ... +| .+. +.+.+..
T Consensus 151 g~~VlV~Ga~g~iG~~~~q~a~~~G-------a~Vi~~-~~~~~~~~-~~~lG------a~~--i~-~~~~~~~~~~~~~ 212 (343)
T 3gaz_A 151 GQTVLIQGGGGGVGHVAIQIALARG-------ARVFAT-ARGSDLEY-VRDLG------ATP--ID-ASREPEDYAAEHT 212 (343)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEE-ECHHHHHH-HHHHT------SEE--EE-TTSCHHHHHHHHH
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCC-------CEEEEE-eCHHHHHH-HHHcC------CCE--ec-cCCCHHHHHHHHh
Confidence 3479999999999999999888777 688887 88888754 45564 222 34 332 2233333
Q ss_pred h--ccCeeEeccCC
Q 014694 87 S--QTKLLLNCVGP 98 (420)
Q Consensus 87 ~--~~dvVIn~aGp 98 (420)
. ++|+||+|+|.
T Consensus 213 ~~~g~D~vid~~g~ 226 (343)
T 3gaz_A 213 AGQGFDLVYDTLGG 226 (343)
T ss_dssp TTSCEEEEEESSCT
T ss_pred cCCCceEEEECCCc
Confidence 2 68999999984
|
| >1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A* | Back alignment and structure |
|---|
Probab=95.87 E-value=0.019 Score=56.35 Aligned_cols=100 Identities=12% Similarity=0.114 Sum_probs=66.7
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEe----------cC---------hhHHHHHHHHhCCCCCCCcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAG----------RN---------PTRVKQALQWASPSHSLSIP 70 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iag----------Rs---------~~kl~~~~~~l~~~~~~~~~ 70 (420)
..+|+|+|+ |.+|..+++.|+..|- -++.+++ |+ ..|.+.+.+.+.. ..+.+.
T Consensus 36 ~~~VlivG~-GGlG~~ia~~La~~Gv------g~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~-lnp~v~ 107 (346)
T 1y8q_A 36 ASRVLLVGL-KGLGAEIAKNLILAGV------KGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQN-LNPMVD 107 (346)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHHTC------SEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHH-TCTTSE
T ss_pred CCeEEEECC-CHHHHHHHHHHHHcCC------CEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHh-HCCCeE
Confidence 357999997 6799999999999983 4788874 32 2355555554431 123444
Q ss_pred EEEE--eCCCHHHHHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEec
Q 014694 71 ILTA--DTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDI 120 (420)
Q Consensus 71 ~i~~--D~~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdi 120 (420)
+... ++++ ...++++++|+||.|...... -..+-++|.+.++.+|+.
T Consensus 108 v~~~~~~~~~--~~~~~~~~~dvVv~~~d~~~~-r~~ln~~~~~~~ip~i~~ 156 (346)
T 1y8q_A 108 VKVDTEDIEK--KPESFFTQFDAVCLTCCSRDV-IVKVDQICHKNSIKFFTG 156 (346)
T ss_dssp EEEECSCGGG--CCHHHHTTCSEEEEESCCHHH-HHHHHHHHHHTTCEEEEE
T ss_pred EEEEecccCc--chHHHhcCCCEEEEcCCCHHH-HHHHHHHHHHcCCCEEEE
Confidence 3333 3322 346778999999999765432 256778999999888775
|
| >2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.87 E-value=0.02 Score=55.00 Aligned_cols=66 Identities=18% Similarity=0.269 Sum_probs=50.5
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
.++|.|+|+ |.+|..+++.|.+.+ ++|.+.+|++++++.+.+ .+ +. . ..+ +.++++++
T Consensus 30 ~~~I~iIG~-G~mG~~~a~~l~~~g-------~~V~~~~~~~~~~~~~~~-~g------~~--~--~~~---~~~~~~~~ 87 (316)
T 2uyy_A 30 DKKIGFLGL-GLMGSGIVSNLLKMG-------HTVTVWNRTAEKCDLFIQ-EG------AR--L--GRT---PAEVVSTC 87 (316)
T ss_dssp SSCEEEECC-SHHHHHHHHHHHHTT-------CCEEEECSSGGGGHHHHH-TT------CE--E--CSC---HHHHHHHC
T ss_pred CCeEEEEcc-cHHHHHHHHHHHhCC-------CEEEEEeCCHHHHHHHHH-cC------CE--E--cCC---HHHHHhcC
Confidence 478999995 999999999999887 689999999998876654 21 11 1 122 44567789
Q ss_pred CeeEeccC
Q 014694 90 KLLLNCVG 97 (420)
Q Consensus 90 dvVIn~aG 97 (420)
|+||.|+.
T Consensus 88 DvVi~av~ 95 (316)
T 2uyy_A 88 DITFACVS 95 (316)
T ss_dssp SEEEECCS
T ss_pred CEEEEeCC
Confidence 99999986
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.85 E-value=0.029 Score=55.20 Aligned_cols=73 Identities=18% Similarity=0.150 Sum_probs=50.9
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH--h
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC--S 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~--~ 87 (420)
.-+|+|+||+|.+|..+++.+...+ .+|++.+ +.++++. +++++ .. ...|..+.+..+++. .
T Consensus 184 g~~VlV~Ga~G~vG~~~~qla~~~G-------a~Vi~~~-~~~~~~~-~~~lG------a~-~v~~~~~~~~~~~~~~~~ 247 (375)
T 2vn8_A 184 GKRVLILGASGGVGTFAIQVMKAWD-------AHVTAVC-SQDASEL-VRKLG------AD-DVIDYKSGSVEEQLKSLK 247 (375)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEE-CGGGHHH-HHHTT------CS-EEEETTSSCHHHHHHTSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC-------CEEEEEe-ChHHHHH-HHHcC------CC-EEEECCchHHHHHHhhcC
Confidence 3479999999999999998887776 6787777 5567654 45664 12 234666544333333 3
Q ss_pred ccCeeEeccCC
Q 014694 88 QTKLLLNCVGP 98 (420)
Q Consensus 88 ~~dvVIn~aGp 98 (420)
++|+||+|+|-
T Consensus 248 g~D~vid~~g~ 258 (375)
T 2vn8_A 248 PFDFILDNVGG 258 (375)
T ss_dssp CBSEEEESSCT
T ss_pred CCCEEEECCCC
Confidence 68999999984
|
| >3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=95.84 E-value=0.0061 Score=58.72 Aligned_cols=88 Identities=20% Similarity=0.288 Sum_probs=57.6
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEE-EEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLA-LAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~-iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
++++|.|+|. |.+|+.+++.|.+.. .+++. +.+|++++++. .+ +.+ .++.+ +.+. .
T Consensus 8 ~~irv~IIG~-G~iG~~~~~~l~~~~------~~elvav~d~~~~~~~~----~g------~~~--~~~~~---l~~~-~ 64 (304)
T 3bio_A 8 KKIRAAIVGY-GNIGRYALQALREAP------DFEIAGIVRRNPAEVPF----EL------QPF--RVVSD---IEQL-E 64 (304)
T ss_dssp CCEEEEEECC-SHHHHHHHHHHHHCT------TEEEEEEECC-----------CC------TTS--CEESS---GGGS-S
T ss_pred CCCEEEEECC-hHHHHHHHHHHhcCC------CCEEEEEEcCCHHHHHH----cC------CCc--CCHHH---HHhC-C
Confidence 4689999986 999999999988753 16765 78898877643 21 221 12333 2233 6
Q ss_pred ccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecC
Q 014694 88 QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdis 121 (420)
++|+||.|..+... ..++..|.++|.|.++-+
T Consensus 65 ~~DvViiatp~~~h--~~~~~~al~aG~~Vi~ek 96 (304)
T 3bio_A 65 SVDVALVCSPSREV--ERTALEILKKGICTADSF 96 (304)
T ss_dssp SCCEEEECSCHHHH--HHHHHHHHTTTCEEEECC
T ss_pred CCCEEEECCCchhh--HHHHHHHHHcCCeEEECC
Confidence 89999998876543 577889999999998863
|
| >1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=95.82 E-value=0.0086 Score=57.06 Aligned_cols=99 Identities=12% Similarity=0.061 Sum_probs=62.4
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
.+++|+||+ .+|+.+++.|++.+ +|.+++|+.++++++.+++........ .+.+|+.|. .+.+.++|
T Consensus 129 k~vlV~GaG-giG~aia~~L~~~G--------~V~v~~r~~~~~~~l~~~~~~~~~~~~-~~~~d~~~~---~~~~~~~D 195 (287)
T 1nvt_A 129 KNIVIYGAG-GAARAVAFELAKDN--------NIIIANRTVEKAEALAKEIAEKLNKKF-GEEVKFSGL---DVDLDGVD 195 (287)
T ss_dssp CEEEEECCS-HHHHHHHHHHTSSS--------EEEEECSSHHHHHHHHHHHHHHHTCCH-HHHEEEECT---TCCCTTCC
T ss_pred CEEEEECch-HHHHHHHHHHHHCC--------CEEEEECCHHHHHHHHHHHhhhccccc-ceeEEEeeH---HHhhCCCC
Confidence 479999985 89999999998763 688899999998888776531000010 112344331 34456899
Q ss_pred eeEeccCCCCCC---cHHH-HHHHHHcCCcEEecCC
Q 014694 91 LLLNCVGPYRLH---GDPV-AAACVHSGCDYLDISG 122 (420)
Q Consensus 91 vVIn~aGp~~~~---~~~v-v~Ac~~~g~~yvdisg 122 (420)
+||||+|..... ..++ -..+...+...+|++-
T Consensus 196 ilVn~ag~~~~~~~~~~~~~~~~~l~~~~~v~Dv~y 231 (287)
T 1nvt_A 196 IIINATPIGMYPNIDVEPIVKAEKLREDMVVMDLIY 231 (287)
T ss_dssp EEEECSCTTCTTCCSSCCSSCSTTCCSSSEEEECCC
T ss_pred EEEECCCCCCCCCCCCCCCCCHHHcCCCCEEEEeee
Confidence 999999864321 0112 1223445666788864
|
| >1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=95.81 E-value=0.027 Score=55.14 Aligned_cols=72 Identities=17% Similarity=0.179 Sum_probs=53.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHh-CCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCH--HHHHHHHh
Q 014694 11 FDVIILGASGFTGKYVVREALKL-FNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDP--PSLHRLCS 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~-~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~--~sl~~~~~ 87 (420)
-+|+|+|| |.+|..+++.+... + .+|++.++++++++.+ ++++ .. ...|..+. +.+.++..
T Consensus 188 ~~VlV~Ga-G~vG~~avqlak~~~G-------a~Vi~~~~~~~~~~~~-~~lG------a~-~vi~~~~~~~~~v~~~~~ 251 (359)
T 1h2b_A 188 AYVAIVGV-GGLGHIAVQLLKVMTP-------ATVIALDVKEEKLKLA-ERLG------AD-HVVDARRDPVKQVMELTR 251 (359)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHCC-------CEEEEEESSHHHHHHH-HHTT------CS-EEEETTSCHHHHHHHHTT
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCC-------CeEEEEeCCHHHHHHH-HHhC------CC-EEEeccchHHHHHHHHhC
Confidence 47999999 89999999988777 6 6899999999998654 4564 12 23466654 34444443
Q ss_pred --ccCeeEeccCC
Q 014694 88 --QTKLLLNCVGP 98 (420)
Q Consensus 88 --~~dvVIn~aGp 98 (420)
+.|+||+++|.
T Consensus 252 g~g~Dvvid~~G~ 264 (359)
T 1h2b_A 252 GRGVNVAMDFVGS 264 (359)
T ss_dssp TCCEEEEEESSCC
T ss_pred CCCCcEEEECCCC
Confidence 58999999984
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 420 | ||||
| d1xgka_ | 350 | c.2.1.2 (A:) Negative transcriptional regulator Nm | 0.003 |
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Score = 36.9 bits (84), Expect = 0.003
Identities = 29/219 (13%), Positives = 49/219 (22%), Gaps = 17/219 (7%)
Query: 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPIL 72
+ ++GA+G G ++R A A + + A P ++ +
Sbjct: 6 IAVVGATGRQGASLIRVAAA------VGHHVRAQV-HSLKGLIAEELQAIP----NVTLF 54
Query: 73 TADTTDPPSLHRLCSQTKLLLNCVGP------YRLHGDPVAAACVHSGCDYLDISGEPEF 126
+ L + L + D AA + S P+
Sbjct: 55 QGPLLNNVPLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDH 114
Query: 127 MERMEARQWIPPAVPNQIEAYVSLESDKRIVGNFGTYESAVLGVANAQELQKLRRSRPRR 186
A +E YV G Y + + +L
Sbjct: 115 SLYGPWPAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFE 174
Query: 187 ARPVIPGPAPLRGPLVESQKRIGLWAIKLPSADATVVRR 225
PL E L I R
Sbjct: 175 WHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHR 213
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 420 | |||
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.39 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.22 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 99.11 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.11 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 99.1 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 99.07 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.05 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.02 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 99.02 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 98.99 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 98.99 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 98.98 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 98.97 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 98.95 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 98.95 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 98.95 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 98.94 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 98.94 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 98.94 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 98.94 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 98.94 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 98.93 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 98.93 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 98.92 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 98.92 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 98.92 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 98.92 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 98.92 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 98.91 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 98.91 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 98.91 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 98.9 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 98.9 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 98.9 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 98.9 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 98.88 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 98.88 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 98.87 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 98.87 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 98.87 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 98.87 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 98.86 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 98.86 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 98.84 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 98.84 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 98.83 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 98.83 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 98.82 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 98.82 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 98.82 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 98.82 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 98.81 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 98.81 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 98.81 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 98.8 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 98.8 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 98.79 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 98.79 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 98.78 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 98.78 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 98.78 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 98.76 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 98.75 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 98.75 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 98.73 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 98.71 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 98.7 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 98.7 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 98.68 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 98.63 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 98.6 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 98.55 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 98.54 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 98.54 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 98.53 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 98.53 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 98.53 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 98.52 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 98.49 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 98.48 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 98.45 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 98.43 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 98.38 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 98.27 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 98.25 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 98.23 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 98.22 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 98.19 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 98.18 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 98.11 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 98.11 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 98.0 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 97.99 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 97.94 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 97.85 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 97.81 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 97.78 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 97.76 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 97.71 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 97.7 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 97.64 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 97.62 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 97.58 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 97.56 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 97.52 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 97.45 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 97.42 | |
| d1mb4a1 | 147 | Aspartate beta-semialdehyde dehydrogenase {Vibrio | 97.4 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 97.4 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 97.4 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 97.4 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 97.38 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 97.34 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 97.29 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 97.24 | |
| d1vkna1 | 176 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 97.2 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 97.19 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 97.17 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 97.16 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 97.16 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 97.14 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 97.13 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 97.12 | |
| d2g17a1 | 179 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 97.11 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 97.1 | |
| d2gz1a1 | 154 | Aspartate beta-semialdehyde dehydrogenase {Strepto | 97.08 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 97.08 | |
| d1nvmb1 | 157 | Acetaldehyde dehydrogenase (acylating) {Pseudomona | 97.04 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 97.01 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 96.97 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 96.92 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 96.9 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 96.89 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 96.86 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 96.86 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 96.85 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 96.79 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 96.76 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 96.71 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 96.68 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 96.64 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 96.63 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 96.6 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 96.59 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 96.55 | |
| d2cvoa1 | 183 | Putative semialdehyde dehydrogenase {Rice (Oryza s | 96.51 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 96.49 | |
| d1nvta1 | 177 | Shikimate 5-dehydrogenase AroE {Archaeon Methanoco | 96.46 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 96.43 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 96.39 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 96.39 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 96.39 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 96.36 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 96.35 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 96.34 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 96.28 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 96.24 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 96.23 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 96.14 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 96.12 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 96.1 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 96.1 | |
| d1f06a1 | 170 | Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb | 96.0 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 95.99 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 95.93 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 95.81 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 95.58 | |
| d1l7da1 | 183 | Nicotinamide nucleotide transhydrogenase dI compon | 95.57 | |
| d1u8xx1 | 167 | Maltose-6'-phosphate glucosidase GlvA {Bacillus su | 95.54 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 95.54 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 95.52 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 95.5 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 95.47 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 95.39 | |
| d2bcgg1 | 297 | Guanine nucleotide dissociation inhibitor, GDI {Ba | 95.24 | |
| d2cvza2 | 156 | Hydroxyisobutyrate dehydrogenase {Thermus thermoph | 95.22 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 95.19 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 95.1 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 95.04 | |
| d1xeaa1 | 167 | Putative oxidoreductase VCA1048 {Vibrio cholerae [ | 95.0 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 94.95 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 94.88 | |
| d1tlta1 | 164 | Virulence factor MviM {Escherichia coli [TaxId: 56 | 94.83 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 94.81 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 94.76 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 94.69 | |
| d1ydwa1 | 184 | Probable oxidoreductase At4g09670 {Thale cress (Ar | 94.62 | |
| d1h6da1 | 221 | Glucose-fructose oxidoreductase, N-terminal domain | 94.59 | |
| d1diha1 | 162 | Dihydrodipicolinate reductase {Escherichia coli [T | 94.52 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 94.49 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 94.41 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 94.31 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 94.23 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 94.17 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 94.16 | |
| d1zh8a1 | 181 | Hypothetical protein TM0312 {Thermotoga maritima [ | 94.14 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 94.0 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 93.99 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 93.91 | |
| d1d5ta1 | 336 | Guanine nucleotide dissociation inhibitor, GDI {Co | 93.84 | |
| d2i76a2 | 153 | Hypothetical protein TM1727 {Thermotoga maritima [ | 93.77 | |
| d1j5pa4 | 132 | Hypothetical protein TM1643 {Thermotoga maritima [ | 93.62 | |
| d2czca2 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 93.34 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 93.23 | |
| d1obba1 | 171 | Alpha-glucosidase AglA {Thermotoga maritima [TaxId | 92.93 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 92.88 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 92.68 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 92.33 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 92.24 | |
| d1yovb1 | 426 | UBA3 {Human (Homo sapiens) [TaxId: 9606]} | 92.04 | |
| d2dt5a2 | 126 | Transcriptional repressor Rex, C-terminal domain { | 91.94 | |
| d1b7go1 | 178 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 91.91 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 91.87 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 91.39 | |
| d1s6ya1 | 169 | 6-phospho-beta-glucosidase {Bacillus stearothermop | 91.24 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 91.15 | |
| d1up7a1 | 162 | 6-phospho-beta-glucosidase {Thermotoga maritima [T | 90.94 | |
| d2gf3a1 | 281 | Sarcosine oxidase {Bacillus sp., strain b0618 [Tax | 90.67 | |
| d1x7da_ | 340 | Ornithine cyclodeaminase {Pseudomonas putida [TaxI | 90.49 | |
| d1gesa1 | 217 | Glutathione reductase {Escherichia coli [TaxId: 56 | 89.69 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 89.65 | |
| d1v59a1 | 233 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 89.36 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 89.25 | |
| d1c1da1 | 201 | Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ | 88.96 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 88.93 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 88.85 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 88.27 | |
| d1v8ba1 | 163 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 88.15 | |
| d2nvwa1 | 237 | Galactose/lactose metabolism regulatory protein GA | 88.04 | |
| d3lada1 | 229 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 87.55 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 87.42 | |
| d1w4xa1 | 298 | Phenylacetone monooxygenase {Thermobifida fusca [T | 87.26 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 87.22 | |
| d1yova1 | 529 | Amyloid beta precursor protein-binding protein 1, | 87.22 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 86.94 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 86.8 | |
| d1vjta1 | 193 | Putative alpha-glucosidase TM0752 {Thermotoga mari | 86.79 | |
| d1nhpa1 | 198 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 86.77 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 86.74 | |
| d2i0za1 | 251 | Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396] | 86.69 | |
| d1leha1 | 230 | Leucine dehydrogenase {Bacillus sphaericus [TaxId: | 86.69 | |
| d2ivda1 | 347 | Protoporphyrinogen oxidase {Myxococcus xanthus [Ta | 86.64 | |
| d1dxla1 | 221 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 86.53 | |
| d2iida1 | 370 | L-aminoacid oxidase {Malayan pit viper (Calloselas | 86.46 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 86.44 | |
| d2f5va1 | 379 | Pyranose 2-oxidase {White-rot fungus (Peniophora s | 86.34 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 86.29 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 86.22 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 86.08 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 85.97 | |
| d3c96a1 | 288 | Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: | 85.89 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 85.71 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 85.67 | |
| d1edza1 | 171 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 85.6 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 85.3 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 85.13 | |
| d1i8ta1 | 298 | UDP-galactopyranose mutase, N-terminal domain {Esc | 84.93 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 84.88 | |
| d2gqfa1 | 253 | Hypothetical protein HI0933 {Haemophilus influenza | 84.5 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 84.42 | |
| d1dlja2 | 196 | UDP-glucose dehydrogenase (UDPGDH) {Streptococcus | 84.36 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 84.31 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 83.96 | |
| d1lvla1 | 220 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 83.85 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 83.64 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 83.14 | |
| d1pj5a2 | 305 | N,N-dimethylglycine oxidase {Arthrobacter globifor | 82.93 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 82.52 | |
| d1k0ia1 | 292 | p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a | 82.46 | |
| d1y0pa2 | 308 | Flavocytochrome c3 (respiratory fumarate reductase | 82.37 | |
| d1cf2o1 | 171 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 81.8 | |
| d1ojta2 | 125 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 81.8 | |
| d1omoa_ | 320 | Archaeal alanine dehydrogenase {Archaeon Archaeogl | 81.65 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 81.62 | |
| d2dw4a2 | 449 | Lysine-specific histone demethylase 1, LSD1 {Human | 81.3 | |
| d1ps9a3 | 179 | 2,4-dienoyl-CoA reductase, middle domain {Escheric | 81.26 | |
| d1fl2a1 | 184 | Alkyl hydroperoxide reductase subunit F (AhpF), C- | 80.86 | |
| d1djqa3 | 233 | Trimethylamine dehydrogenase, middle domain {Methy | 80.17 |
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.39 E-value=5.1e-13 Score=120.13 Aligned_cols=97 Identities=14% Similarity=0.230 Sum_probs=82.6
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccCe
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKL 91 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~dv 91 (420)
+|+|+||||++|++++++|++++ ++|.+..|+.++++.. ...+++++.+|++|.+++.++++++|+
T Consensus 5 kIlV~GatG~iG~~v~~~Ll~~g-------~~V~~~~R~~~~~~~~-------~~~~~~~~~gD~~d~~~l~~al~~~d~ 70 (205)
T d1hdoa_ 5 KIAIFGATGQTGLTTLAQAVQAG-------YEVTVLVRDSSRLPSE-------GPRPAHVVVGDVLQAADVDKTVAGQDA 70 (205)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTT-------CEEEEEESCGGGSCSS-------SCCCSEEEESCTTSHHHHHHHHTTCSE
T ss_pred EEEEECCCCHHHHHHHHHHHHCc-------CEEEEEEcChhhcccc-------cccccccccccccchhhHHHHhcCCCE
Confidence 69999999999999999999987 8999999999886321 235689999999999999999999999
Q ss_pred eEeccCCCCCC---------cHHHHHHHHHcCC-cEEecCC
Q 014694 92 LLNCVGPYRLH---------GDPVAAACVHSGC-DYLDISG 122 (420)
Q Consensus 92 VIn~aGp~~~~---------~~~vv~Ac~~~g~-~yvdisg 122 (420)
|||++|+.... ..++++++.++++ ++|.+|+
T Consensus 71 vi~~~g~~~~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss 111 (205)
T d1hdoa_ 71 VIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTS 111 (205)
T ss_dssp EEECCCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred EEEEeccCCchhhhhhhHHHHHHHHHHHHhcCCCeEEEEee
Confidence 99999974321 2688999999998 5777764
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=99.22 E-value=1.5e-11 Score=118.39 Aligned_cols=103 Identities=10% Similarity=0.146 Sum_probs=79.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC----hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN----PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs----~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
|+|+|||||||+|++++++|++++ ++|.+++|. .+.+... +.+. ..++.++++|++|.+.+.+++
T Consensus 1 MKiLItG~tGfIG~~l~~~L~~~g-------~~V~~~d~~~~~~~~~~~~~-~~~~---~~~~~~~~~Dl~d~~~l~~~~ 69 (338)
T d1udca_ 1 MRVLVTGGSGYIGSHTCVQLLQNG-------HDVIILDNLCNSKRSVLPVI-ERLG---GKHPTFVEGDIRNEALMTEIL 69 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEECCSSCCTTHHHHH-HHHH---TSCCEEEECCTTCHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCc-------CEEEEEECCCCcchhhHHHH-Hhhc---CCCCEEEEeecCCHHHHHHHH
Confidence 689999999999999999999998 789888762 2222222 2221 357899999999999999999
Q ss_pred h--ccCeeEeccCCCCC-C---------------cHHHHHHHHHcCC-cEEecCCcH
Q 014694 87 S--QTKLLLNCVGPYRL-H---------------GDPVAAACVHSGC-DYLDISGEP 124 (420)
Q Consensus 87 ~--~~dvVIn~aGp~~~-~---------------~~~vv~Ac~~~g~-~yvdisge~ 124 (420)
+ ++|+|||+|+.... . ..+++++|.+.++ ++|.+|+..
T Consensus 70 ~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~ 126 (338)
T d1udca_ 70 HDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSAT 126 (338)
T ss_dssp HHTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGG
T ss_pred hccCCCEEEECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcce
Confidence 8 78999999985321 0 1679999999997 577766543
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=99.11 E-value=4.5e-11 Score=114.80 Aligned_cols=100 Identities=15% Similarity=0.135 Sum_probs=77.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHH-HHhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHR-LCSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~-~~~~~ 89 (420)
|+|+|||||||+|++++++|++++. .+|.+.++...+...+. ...+++++.+|++|.+++.+ +.+++
T Consensus 1 MKILITG~tGfiG~~l~~~Ll~~g~------~~V~~ld~~~~~~~~~~------~~~~~~~i~~Di~~~~~~~~~~~~~~ 68 (342)
T d2blla1 1 MRVLILGVNGFIGNHLTERLLREDH------YEVYGLDIGSDAISRFL------NHPHFHFVEGDISIHSEWIEYHVKKC 68 (342)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTT------CEEEEEESCCGGGGGGT------TCTTEEEEECCTTTCSHHHHHHHHHC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC------CEEEEEeCCCcchhhhc------cCCCeEEEECccCChHHHHHHHHhCC
Confidence 6899999999999999999999872 57888888665543322 24578999999988766555 77889
Q ss_pred CeeEeccCCCCCC----------------cHHHHHHHHHcCCcEEecCC
Q 014694 90 KLLLNCVGPYRLH----------------GDPVAAACVHSGCDYLDISG 122 (420)
Q Consensus 90 dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~~yvdisg 122 (420)
|+|||+|+..... ..+++++|.+.+++.+.++.
T Consensus 69 d~Vih~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~~~~~~ss 117 (342)
T d2blla1 69 DVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 117 (342)
T ss_dssp SEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECC
T ss_pred CccccccccccccccccCCcccccccccccccccccccccccccccccc
Confidence 9999999965421 27788999999987666554
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.11 E-value=1.3e-10 Score=110.52 Aligned_cols=95 Identities=16% Similarity=0.219 Sum_probs=73.3
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEec--ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR--NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagR--s~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
+|+|||||||+|++++++|++++ ++|++++| ...+.+.+ ..+. ...+++++.+|+.|.+++.++++++
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~g-------~~V~~id~~~~~~~~~~~-~~~~--~~~~~~~i~~Di~~~~~l~~~~~~~ 71 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQG-------IDLIVFDNLSRKGATDNL-HWLS--SLGNFEFVHGDIRNKNDVTRLITKY 71 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-------CEEEEEECCCSTTHHHHH-HHHH--TTCCCEEEECCTTCHHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCc-------CEEEEEECCCcccchhHH-HHhh--ccCCcEEEEcccCCHHHHHHHHHhc
Confidence 69999999999999999999987 78988874 22222222 2221 2357899999999999999999865
Q ss_pred --CeeEeccCCCCCC----------------cHHHHHHHHHcCCc
Q 014694 90 --KLLLNCVGPYRLH----------------GDPVAAACVHSGCD 116 (420)
Q Consensus 90 --dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~~ 116 (420)
|+|||+|++.... ..+|+++|.++++.
T Consensus 72 ~~d~Vih~aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~ 116 (338)
T d1orra_ 72 MPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSN 116 (338)
T ss_dssp CCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred CCceEEeecccccccccccChHHHHHHHHHHHHHHHHhhhccccc
Confidence 9999999976432 15788888888873
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=99.10 E-value=8.6e-11 Score=114.11 Aligned_cols=103 Identities=17% Similarity=0.160 Sum_probs=73.9
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh-----hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-----TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~-----~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
.++|||||||+|++++++|++.+ ++|.+++|.. .+++.+..+.. ....++.++++|++|.+++.+.+
T Consensus 3 ~vLITGatGfiGs~lv~~Ll~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~ 74 (357)
T d1db3a_ 3 VALITGVTGQDGSYLAEFLLEKG-------YEVHGIKRRASSFNTERVDHIYQDPH-TCNPKFHLHYGDLSDTSNLTRIL 74 (357)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-------CEEEEECC----------------------CCEEECCCCSSCHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCc-------CEEEEEECCCcccchhhHHHHHhhhh-hcCCCeEEEEeecCCHHHHHHHH
Confidence 57799999999999999999987 7999999843 33433332211 12357889999999999999999
Q ss_pred hcc--CeeEeccCCCCCC----------------cHHHHHHHHHcCC----cEEecCC
Q 014694 87 SQT--KLLLNCVGPYRLH----------------GDPVAAACVHSGC----DYLDISG 122 (420)
Q Consensus 87 ~~~--dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~----~yvdisg 122 (420)
+++ |+|||+|+..... ..+++++|.++++ ++|.+|.
T Consensus 75 ~~~~~d~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS 132 (357)
T d1db3a_ 75 REVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQAST 132 (357)
T ss_dssp HHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEE
T ss_pred hccCCCEEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEc
Confidence 865 9999999864321 1678899998776 3787774
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=99.07 E-value=1.2e-10 Score=103.50 Aligned_cols=81 Identities=14% Similarity=0.149 Sum_probs=71.9
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
+..+|+|+||+|.+|+.+++.|++++ .+|++++|+.++++++.+++.. ..++.+..+|+.|.+++++++.+
T Consensus 22 ~gK~vlItGasgGIG~~ia~~la~~G-------~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~ 92 (191)
T d1luaa1 22 KGKKAVVLAGTGPVGMRSAALLAGEG-------AEVVLCGRKLDKAQAAADSVNK--RFKVNVTAAETADDASRAEAVKG 92 (191)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESSHHHHHHHHHHHHH--HHTCCCEEEECCSHHHHHHHTTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhhc-------cchhhcccchHHHHHHHHHHHh--ccchhhhhhhcccHHHHHHHhcC
Confidence 34579999999999999999999998 7999999999999888887742 23567789999999999999999
Q ss_pred cCeeEeccCC
Q 014694 89 TKLLLNCVGP 98 (420)
Q Consensus 89 ~dvVIn~aGp 98 (420)
+|+|||++|.
T Consensus 93 iDilin~Ag~ 102 (191)
T d1luaa1 93 AHFVFTAGAI 102 (191)
T ss_dssp CSEEEECCCT
T ss_pred cCeeeecCcc
Confidence 9999999985
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.05 E-value=3.6e-11 Score=109.94 Aligned_cols=100 Identities=22% Similarity=0.259 Sum_probs=78.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
.+|+|+|||||+|++++++|++++. ..+|.+.+|++.+.... ....+.+..+|+.+.+++.+.++++|
T Consensus 15 k~IlItGaTG~iG~~l~~~Ll~~g~-----~~~v~~~~R~~~~~~~~-------~~~~i~~~~~D~~~~~~~~~~~~~~d 82 (232)
T d2bkaa1 15 KSVFILGASGETGRVLLKEILEQGL-----FSKVTLIGRRKLTFDEE-------AYKNVNQEVVDFEKLDDYASAFQGHD 82 (232)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHHTC-----CSEEEEEESSCCCCCSG-------GGGGCEEEECCGGGGGGGGGGGSSCS
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCC-----CCEEEEEecChhhhccc-------ccceeeeeeecccccccccccccccc
Confidence 4799999999999999999999872 13899999976543211 12356788899999999999999999
Q ss_pred eeEeccCCCCCC-------------cHHHHHHHHHcCCc-EEecCC
Q 014694 91 LLLNCVGPYRLH-------------GDPVAAACVHSGCD-YLDISG 122 (420)
Q Consensus 91 vVIn~aGp~~~~-------------~~~vv~Ac~~~g~~-yvdisg 122 (420)
+||||+|..... ..+++++|.+++++ ++.+|.
T Consensus 83 ~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss 128 (232)
T d2bkaa1 83 VGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSS 128 (232)
T ss_dssp EEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECC
T ss_pred cccccccccccccchhhhhhhcccccceeeecccccCccccccCCc
Confidence 999999964321 26788999999985 677664
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.02 E-value=6.3e-10 Score=107.10 Aligned_cols=100 Identities=15% Similarity=0.187 Sum_probs=76.4
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh----hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP----TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~----~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
.|||||||||+|++++++|++++ ++|.+++|.. +.+... +.+. ..+++++.+|++|.+.++++++
T Consensus 3 ~ILVTGatGfIG~~lv~~Ll~~g-------~~V~~~d~~~~~~~~~~~~~-~~~~---~~~v~~~~~Dl~d~~~l~~~~~ 71 (347)
T d1z45a2 3 IVLVTGGAGYIGSHTVVELIENG-------YDCVVADNLSNSTYDSVARL-EVLT---KHHIPFYEVDLCDRKGLEKVFK 71 (347)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-------CEEEEEECCSSCCTHHHHHH-HHHH---TSCCCEEECCTTCHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCc-------CeEEEEECCCCcchhHHHhH-Hhhc---ccCCeEEEeecCCHHHHHHHHh
Confidence 39999999999999999999997 7898887521 222222 2221 3578999999999999999987
Q ss_pred --ccCeeEeccCCCCCC----------------cHHHHHHHHHcCC-cEEecCC
Q 014694 88 --QTKLLLNCVGPYRLH----------------GDPVAAACVHSGC-DYLDISG 122 (420)
Q Consensus 88 --~~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~-~yvdisg 122 (420)
++|+|||+|+..... ..+++++|.+.++ ++|.+|.
T Consensus 72 ~~~~d~VihlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS 125 (347)
T d1z45a2 72 EYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSS 125 (347)
T ss_dssp HSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred ccCCCEEEEccccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecc
Confidence 689999999965321 1678899999997 5666654
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.02 E-value=2.1e-10 Score=111.04 Aligned_cols=103 Identities=12% Similarity=0.059 Sum_probs=81.0
Q ss_pred CCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 014694 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 7 ~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
|++.|+|+|||||||+|++|+++|++++ ++|++++|...+. ... .....++..+|+.|.+.+.+++
T Consensus 12 ~~~nMKILVTGgsGfIGs~lv~~L~~~g-------~~V~~~d~~~~~~--~~~-----~~~~~~~~~~D~~~~~~~~~~~ 77 (363)
T d2c5aa1 12 PSENLKISITGAGGFIASHIARRLKHEG-------HYVIASDWKKNEH--MTE-----DMFCDEFHLVDLRVMENCLKVT 77 (363)
T ss_dssp TTSCCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESSCCSS--SCG-----GGTCSEEEECCTTSHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCc-------CEEEEEeCCCccc--hhh-----hcccCcEEEeechhHHHHHHHh
Confidence 5567999999999999999999999987 7899888754321 001 1235578889999999999999
Q ss_pred hccCeeEeccCCCCCC-----------------cHHHHHHHHHcCC-cEEecCCc
Q 014694 87 SQTKLLLNCVGPYRLH-----------------GDPVAAACVHSGC-DYLDISGE 123 (420)
Q Consensus 87 ~~~dvVIn~aGp~~~~-----------------~~~vv~Ac~~~g~-~yvdisge 123 (420)
+++|.|||+++..... ..+++++|.++++ ++|.+|..
T Consensus 78 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~ 132 (363)
T d2c5aa1 78 EGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSA 132 (363)
T ss_dssp TTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEG
T ss_pred hcCCeEeecccccccccccccccccccccccchhhHHHHhHHhhCcccccccccc
Confidence 9999999999865431 2678999999998 57776653
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=98.99 E-value=9.8e-10 Score=102.69 Aligned_cols=102 Identities=20% Similarity=0.240 Sum_probs=79.1
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh-----HHHHHHHHhCCCCCCCccEEEEeCCCHHHHH
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT-----RVKQALQWASPSHSLSIPILTADTTDPPSLH 83 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~-----kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~ 83 (420)
++.+|+|+|||||+|++++++|+++| ++|.++.|+.. +.+. ...+. ..+++++.+|+.|.+++.
T Consensus 2 ~k~KILVtGatG~iG~~l~~~L~~~G-------~~V~~~~R~~~~~~~~~~~~-~~~~~---~~~v~~v~~d~~d~~~~~ 70 (312)
T d1qyda_ 2 KKSRVLIVGGTGYIGKRIVNASISLG-------HPTYVLFRPEVVSNIDKVQM-LLYFK---QLGAKLIEASLDDHQRLV 70 (312)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHTT-------CCEEEECCSCCSSCHHHHHH-HHHHH---TTTCEEECCCSSCHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCC-------CEEEEEECCCcccchhHHHH-Hhhhc---cCCcEEEEeecccchhhh
Confidence 45679999999999999999999988 78999999743 2222 22222 346889999999999999
Q ss_pred HHHhccCeeEeccCCCCCC-----cHHHHHHHHHcCC-cEEecC
Q 014694 84 RLCSQTKLLLNCVGPYRLH-----GDPVAAACVHSGC-DYLDIS 121 (420)
Q Consensus 84 ~~~~~~dvVIn~aGp~~~~-----~~~vv~Ac~~~g~-~yvdis 121 (420)
+.+.+++.+|+++++.... ..+++++|.+.+. +++..|
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~S 114 (312)
T d1qyda_ 71 DALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPS 114 (312)
T ss_dssp HHHTTCSEEEECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEECS
T ss_pred hhccCcchhhhhhhhcccccchhhhhHHHHHHHHhcCCcEEEEe
Confidence 9999999999999864321 3677888888764 666554
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=98.99 E-value=3.4e-10 Score=108.75 Aligned_cols=98 Identities=13% Similarity=0.083 Sum_probs=77.8
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc-
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~- 88 (420)
..+|+|||||||+|++++++|++.+ ++|.+.+|+..+...+.+... ....++++.+|++|++.+.++++.
T Consensus 8 ~KkILVTG~tGfIGs~lv~~Ll~~g-------~~V~~~~r~~~~~~~~~~~~~--~~~~i~~~~~Dl~d~~~l~~~~~~~ 78 (356)
T d1rkxa_ 8 GKRVFVTGHTGFKGGWLSLWLQTMG-------ATVKGYSLTAPTVPSLFETAR--VADGMQSEIGDIRDQNKLLESIREF 78 (356)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESSCSSSSCHHHHTT--TTTTSEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEECCCCccHHHHhhhh--cccCCeEEEeeccChHhhhhhhhhc
Confidence 3689999999999999999999998 799999998766555544443 235789999999999999999874
Q ss_pred -cCeeEeccCCCCCC----------------cHHHHHHHHHcCCc
Q 014694 89 -TKLLLNCVGPYRLH----------------GDPVAAACVHSGCD 116 (420)
Q Consensus 89 -~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~~ 116 (420)
.++|+|+++..... ..+++++|.+.+..
T Consensus 79 ~~~~v~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~ 123 (356)
T d1rkxa_ 79 QPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGV 123 (356)
T ss_dssp CCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCC
T ss_pred hhhhhhhhhccccccccccCCccccccccccchhhhhhhhccccc
Confidence 58999999864321 15778888877653
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.98 E-value=1.8e-09 Score=99.57 Aligned_cols=83 Identities=18% Similarity=0.154 Sum_probs=72.4
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++||||++.||+.+++.|+++| .+|++.+|+.++++++.+++.. ...++..+.||++|+++++++++
T Consensus 8 kv~lITGas~GIG~~ia~~la~~G-------~~V~l~~r~~~~l~~~~~~~~~-~~~~~~~~~~Dvs~~~~v~~~~~~i~ 79 (244)
T d1yb1a_ 8 EIVLITGAGHGIGRLTAYEFAKLK-------SKLVLWDINKHGLEETAAKCKG-LGAKVHTFVVDCSNREDIYSSAKKVK 79 (244)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEeeCCCHHHHHHHHHHHH
Confidence 369999999999999999999998 8999999999999999887742 34567889999999999999876
Q ss_pred ----ccCeeEeccCCCCC
Q 014694 88 ----QTKLLLNCVGPYRL 101 (420)
Q Consensus 88 ----~~dvVIn~aGp~~~ 101 (420)
..|++||++|....
T Consensus 80 ~~~g~idilinnag~~~~ 97 (244)
T d1yb1a_ 80 AEIGDVSILVNNAGVVYT 97 (244)
T ss_dssp HHTCCCSEEEECCCCCCC
T ss_pred HHcCCCceeEeecccccc
Confidence 47999999997543
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=98.97 E-value=4.9e-10 Score=107.83 Aligned_cols=107 Identities=12% Similarity=0.062 Sum_probs=80.8
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHHHh
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~-~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
+..+|+|||||||+|++++++|+++| ++|.++.|+.++.+.+...... ........+.+|+.|.+++.+++.
T Consensus 10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G-------~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 82 (342)
T d1y1pa1 10 EGSLVLVTGANGFVASHVVEQLLEHG-------YKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK 82 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT
T ss_pred CcCEEEEECCCCHHHHHHHHHHHHCc-------CEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcc
Confidence 34589999999999999999999998 8999999998877655432211 011223346689999999999999
Q ss_pred ccCeeEeccCCCCCC-------------cHHHHHHHHHcC-C-cEEecCC
Q 014694 88 QTKLLLNCVGPYRLH-------------GDPVAAACVHSG-C-DYLDISG 122 (420)
Q Consensus 88 ~~dvVIn~aGp~~~~-------------~~~vv~Ac~~~g-~-~yvdisg 122 (420)
++|.|+|++++.... ..+++++|.+.+ + ++|.+|.
T Consensus 83 ~~~~v~~~a~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS 132 (342)
T d1y1pa1 83 GAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSS 132 (342)
T ss_dssp TCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECC
T ss_pred cchhhhhhcccccccccccccccchhhhHHHHHHhhhccccccccccccc
Confidence 999999999975432 167888998874 4 4565553
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.95 E-value=9.9e-10 Score=102.10 Aligned_cols=84 Identities=15% Similarity=0.123 Sum_probs=71.4
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHh-
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~-~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
...++|+||++.||+.+|+.|+++| ++|++.+|++++++++.+++... ...++..+.||++|+++++++++
T Consensus 10 ~Kv~lITGas~GIG~aiA~~la~~G-------~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~ 82 (257)
T d1xg5a_ 10 DRLALVTGASGGIGAAVARALVQQG-------LKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSA 82 (257)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHH
Confidence 3469999999999999999999998 89999999999999988877531 12356778999999999999876
Q ss_pred ------ccCeeEeccCCCC
Q 014694 88 ------QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (420)
+.|++||+||...
T Consensus 83 ~~~~~g~iD~lVnnAg~~~ 101 (257)
T d1xg5a_ 83 IRSQHSGVDICINNAGLAR 101 (257)
T ss_dssp HHHHHCCCSEEEECCCCCC
T ss_pred HHHhcCCCCEEEecccccC
Confidence 5799999999754
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=98.95 E-value=1.6e-09 Score=100.61 Aligned_cols=79 Identities=16% Similarity=0.181 Sum_probs=71.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||++.||+.+++.|+++| .+|++.+|+.++++++.++++ .++..+.+|++|+++++++++
T Consensus 6 K~alVTGas~GIG~aia~~la~~G-------a~V~~~~r~~~~l~~~~~~~~----~~~~~~~~Dvt~~~~v~~~~~~~~ 74 (256)
T d1k2wa_ 6 KTALITGSARGIGRAFAEAYVREG-------ARVAIADINLEAARATAAEIG----PAACAIALDVTDQASIDRCVAELL 74 (256)
T ss_dssp EEEEEETCSSHHHHHHHHHHHHTT-------EEEEEEESCHHHHHHHHHHHC----TTEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHhC----CceEEEEeeCCCHHHHHHHHHHHH
Confidence 469999999999999999999998 899999999999999999885 467789999999999999876
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
+.|++||+||...
T Consensus 75 ~~~g~iDilVnnAg~~~ 91 (256)
T d1k2wa_ 75 DRWGSIDILVNNAALFD 91 (256)
T ss_dssp HHHSCCCEEEECCCCCC
T ss_pred HHhCCccEEEeeccccc
Confidence 4799999999654
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.95 E-value=4.3e-09 Score=97.37 Aligned_cols=78 Identities=15% Similarity=0.154 Sum_probs=69.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..+||+||++.||+.+++.|++++ .+|++.+|++++++++.+++. +...+.+|++|+++++++++
T Consensus 7 K~alITGas~GIG~aia~~la~~G-------a~V~i~~r~~~~~~~~~~~~~-----~~~~~~~Dvs~~~~v~~~~~~~~ 74 (250)
T d1ydea1 7 KVVVVTGGGRGIGAGIVRAFVNSG-------ARVVICDKDESGGRALEQELP-----GAVFILCDVTQEDDVKTLVSETI 74 (250)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHCT-----TEEEEECCTTSHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHhcC-----CCeEEEccCCCHHHHHHHHHHHH
Confidence 369999999999999999999998 899999999999999888764 56789999999999999876
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
+.|++||+||...
T Consensus 75 ~~~g~iDilVnnAG~~~ 91 (250)
T d1ydea1 75 RRFGRLDCVVNNAGHHP 91 (250)
T ss_dssp HHHSCCCEEEECCCCCC
T ss_pred HhcCCCCEEEecccccc
Confidence 4799999999643
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=98.94 E-value=1.4e-09 Score=100.67 Aligned_cols=81 Identities=17% Similarity=0.161 Sum_probs=72.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..+||+||++.||+.+++.|+++| .+|++.+|+.++++++.+++.. ..++.++.+|++|+++++++++
T Consensus 7 K~alVTGas~GIG~aia~~la~~G-------a~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~ 77 (251)
T d1zk4a1 7 KVAIITGGTLGIGLAIATKFVEEG-------AKVMITGRHSDVGEKAAKSVGT--PDQIQFFQHDSSDEDGWTKLFDATE 77 (251)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHCC--TTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHhCC--CCcEEEEEccCCCHHHHHHHHHHHH
Confidence 469999999999999999999998 8999999999999999998863 4578889999999999998876
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
+.|++||+||...
T Consensus 78 ~~~G~iDiLVnnAg~~~ 94 (251)
T d1zk4a1 78 KAFGPVSTLVNNAGIAV 94 (251)
T ss_dssp HHHSSCCEEEECCCCCC
T ss_pred HHhCCceEEEecccccc
Confidence 4799999999754
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=98.94 E-value=2.2e-09 Score=104.59 Aligned_cols=103 Identities=17% Similarity=0.219 Sum_probs=73.7
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEec---------C---hhHHHHHHHHhCC----CCCCCccEEE
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR---------N---PTRVKQALQWASP----SHSLSIPILT 73 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagR---------s---~~kl~~~~~~l~~----~~~~~~~~i~ 73 (420)
.|+|+|||||||+|++++++|+++.. ++|+++++ . .++.....+.... .....+.++.
T Consensus 2 ~MKVLITG~tGfIGs~lv~~LL~~~~------~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (383)
T d1gy8a_ 2 HMRVLVCGGAGYIGSHFVRALLRDTN------HSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEV 75 (383)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCC------CEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEE
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHhCC------CEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEE
Confidence 47899999999999999999998652 78998874 1 1222222222211 1123577899
Q ss_pred EeCCCHHHHHHHHh---ccCeeEeccCCCCCC----------------cHHHHHHHHHcCCcEE
Q 014694 74 ADTTDPPSLHRLCS---QTKLLLNCVGPYRLH----------------GDPVAAACVHSGCDYL 118 (420)
Q Consensus 74 ~D~~d~~sl~~~~~---~~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~~yv 118 (420)
+|++|.+.++++++ .+|+|||+|++.... ..+++++|.++++..+
T Consensus 76 ~Di~d~~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~ 139 (383)
T d1gy8a_ 76 GDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKI 139 (383)
T ss_dssp SCTTCHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEE
T ss_pred CcccCHHHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccCCccc
Confidence 99999999999986 469999999975421 1667788888887533
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=98.94 E-value=1.2e-09 Score=106.76 Aligned_cols=102 Identities=14% Similarity=0.075 Sum_probs=74.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh--------------------hHHHHHHHHhCCCCCCCcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--------------------TRVKQALQWASPSHSLSIP 70 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~--------------------~kl~~~~~~l~~~~~~~~~ 70 (420)
|+|+|||||||+|++++++|++.+ ++|++++.-. +.+..... + ...+++
T Consensus 2 ~kILVTGatGfiG~~lv~~Ll~~g-------~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~i~ 70 (393)
T d1i24a_ 2 SRVMVIGGDGYCGWATALHLSKKN-------YEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKA-L---TGKSIE 70 (393)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHH-H---HCCCCE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCc-------CEEEEEecCCcccccccccccccccccchHHHHHHHHh-h---cCCCcE
Confidence 689999999999999999999988 8898886211 11111111 1 135789
Q ss_pred EEEEeCCCHHHHHHHHhc--cCeeEeccCCCCC----C---------------cHHHHHHHHHcCC--cEEecCCc
Q 014694 71 ILTADTTDPPSLHRLCSQ--TKLLLNCVGPYRL----H---------------GDPVAAACVHSGC--DYLDISGE 123 (420)
Q Consensus 71 ~i~~D~~d~~sl~~~~~~--~dvVIn~aGp~~~----~---------------~~~vv~Ac~~~g~--~yvdisge 123 (420)
++.+|++|.+.+++++++ .|+|||+|+.... . ..+++++|.+.+. +++..|..
T Consensus 71 ~~~~Dl~d~~~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~ 146 (393)
T d1i24a_ 71 LYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTM 146 (393)
T ss_dssp EEESCTTSHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCG
T ss_pred EEEccCCCHHHHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeecccc
Confidence 999999999999999985 5999999985321 1 1567888888775 35555433
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=98.94 E-value=2e-09 Score=100.46 Aligned_cols=81 Identities=15% Similarity=0.183 Sum_probs=71.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..+||+||++.||+.+|++|+++| .+|++.+|++++++++.+++.. ...+.++.+|++|+++++++++
T Consensus 7 KvalITGas~GIG~aia~~la~~G-------a~V~i~~r~~~~~~~~~~~l~~--~~~~~~~~~Dv~~~~~v~~~~~~~~ 77 (268)
T d2bgka1 7 KVAIITGGAGGIGETTAKLFVRYG-------AKVVIADIADDHGQKVCNNIGS--PDVISFVHCDVTKDEDVRNLVDTTI 77 (268)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHCC--TTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHhcC--CCceEEEEccCCCHHHHHHHHHHHH
Confidence 469999999999999999999998 8999999999999999999863 3456788999999999999876
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
+.|++||+||...
T Consensus 78 ~~~g~iD~lVnnAG~~~ 94 (268)
T d2bgka1 78 AKHGKLDIMFGNVGVLS 94 (268)
T ss_dssp HHHSCCCEEEECCCCCC
T ss_pred HHcCCcceecccccccc
Confidence 5799999999653
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=98.94 E-value=4.1e-09 Score=97.96 Aligned_cols=82 Identities=16% Similarity=0.123 Sum_probs=71.4
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..+|||||++.||+.+++.|+++| .+|++.+|++++++++.+++.. ...++..+.+|++|+++++++++
T Consensus 6 K~alITGas~GIG~aia~~la~~G-------a~V~~~~r~~~~l~~~~~~~~~-~g~~~~~~~~Dv~~~~~v~~~~~~~~ 77 (260)
T d1zema1 6 KVCLVTGAGGNIGLATALRLAEEG-------TAIALLDMNREALEKAEASVRE-KGVEARSYVCDVTSEEAVIGTVDSVV 77 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHT-TTSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 469999999999999999999998 8999999999999998888753 23467789999999999998876
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
..|++||++|...
T Consensus 78 ~~~g~iDilVnnaG~~~ 94 (260)
T d1zema1 78 RDFGKIDFLFNNAGYQG 94 (260)
T ss_dssp HHHSCCCEEEECCCCCC
T ss_pred HHhCCCCeehhhhcccc
Confidence 4799999999653
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.93 E-value=1.5e-09 Score=100.08 Aligned_cols=79 Identities=14% Similarity=0.069 Sum_probs=70.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||++.||+.+++.|++++ .+|++.+|++++++++.++++ .+..++.+|++|+++++++++
T Consensus 7 K~alITGas~GIG~aia~~la~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~ 75 (244)
T d1nffa_ 7 KVALVSGGARGMGASHVRAMVAEG-------AKVVFGDILDEEGKAMAAELA----DAARYVHLDVTQPAQWKAAVDTAV 75 (244)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHTG----GGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHhh----CcceEEEeecCCHHHHHHHHHHHH
Confidence 469999999999999999999998 899999999999999998874 456788999999999998876
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
..|++||+||...
T Consensus 76 ~~~g~idilinnAG~~~ 92 (244)
T d1nffa_ 76 TAFGGLHVLVNNAGILN 92 (244)
T ss_dssp HHHSCCCEEEECCCCCC
T ss_pred HHhCCCeEEEECCcccC
Confidence 4799999999754
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=98.93 E-value=3.6e-09 Score=98.10 Aligned_cols=79 Identities=19% Similarity=0.078 Sum_probs=70.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..+|||||++.||+.++++|+++| .+|++.+|+.++++++.++++ .++.++.+|++|+++++++++
T Consensus 6 K~alVTGas~GIG~aia~~la~~G-------a~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~ 74 (254)
T d1hdca_ 6 KTVIITGGARGLGAEAARQAVAAG-------ARVVLADVLDEEGAATARELG----DAARYQHLDVTIEEDWQRVVAYAR 74 (254)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHTTG----GGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEeCcCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHhC----CceEEEEcccCCHHHHHHHHHHHH
Confidence 469999999999999999999998 899999999999999888774 467889999999999999876
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
+.|++||+||...
T Consensus 75 ~~~g~iDilVnnAg~~~ 91 (254)
T d1hdca_ 75 EEFGSVDGLVNNAGIST 91 (254)
T ss_dssp HHHSCCCEEEECCCCCC
T ss_pred HHcCCccEEEecCcccc
Confidence 5799999999754
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=98.92 E-value=1.9e-09 Score=99.87 Aligned_cols=102 Identities=21% Similarity=0.265 Sum_probs=80.1
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHH-----HHHHHHhCCCCCCCccEEEEeCCCHHHHHH
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRV-----KQALQWASPSHSLSIPILTADTTDPPSLHR 84 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl-----~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~ 84 (420)
+.+|+|+|||||+|++++++|++++ ++|.+++|+.... ......+. ..++.++.+|+.+.+.+.+
T Consensus 3 kkKILVtGatG~iG~~l~~~L~~~G-------~~V~~l~R~~~~~~~~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~ 72 (307)
T d1qyca_ 3 RSRILLIGATGYIGRHVAKASLDLG-------HPTFLLVRESTASSNSEKAQLLESFK---ASGANIVHGSIDDHASLVE 72 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTT-------CCEEEECCCCCTTTTHHHHHHHHHHH---TTTCEEECCCTTCHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-------CeEEEEECCCccccchhHHHHHHhhc---cCCcEEEEeecccchhhhh
Confidence 4589999999999999999999988 7899999975331 11122221 3467889999999999999
Q ss_pred HHhccCeeEeccCCCCCCc-HHHHHHHHHcCCc-EEecC
Q 014694 85 LCSQTKLLLNCVGPYRLHG-DPVAAACVHSGCD-YLDIS 121 (420)
Q Consensus 85 ~~~~~dvVIn~aGp~~~~~-~~vv~Ac~~~g~~-yvdis 121 (420)
.+++++.|||+++.....+ .+++++|.++++. ++..|
T Consensus 73 ~~~~~~~vi~~~~~~~~~~~~~~~~a~~~~~~~~~~~~s 111 (307)
T d1qyca_ 73 AVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPS 111 (307)
T ss_dssp HHHTCSEEEECCCGGGSGGGHHHHHHHHHHCCCSEEECS
T ss_pred hhhhceeeeecccccccchhhHHHHHHHHhccccceeee
Confidence 9999999999998766544 7888999988874 44443
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.92 E-value=2.4e-09 Score=98.53 Aligned_cols=78 Identities=14% Similarity=0.101 Sum_probs=70.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..+||+||++.||+.+++.|+++| .+|++.+|++++++++.+++. ++..+.+|++|+++++++++
T Consensus 6 K~alITGas~GIG~aia~~la~~G-------a~V~~~~r~~~~l~~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~g 73 (242)
T d1cyda_ 6 LRALVTGAGKGIGRDTVKALHASG-------AKVVAVTRTNSDLVSLAKECP-----GIEPVCVDLGDWDATEKALGGIG 73 (242)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHST-----TCEEEECCTTCHHHHHHHHTTCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHhcC-----CCeEEEEeCCCHHHHHHHHHHcC
Confidence 479999999999999999999998 899999999999999888763 57789999999999999987
Q ss_pred ccCeeEeccCCCC
Q 014694 88 QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ~~dvVIn~aGp~~ 100 (420)
+.|++||+||...
T Consensus 74 ~iDilVnnAg~~~ 86 (242)
T d1cyda_ 74 PVDLLVNNAALVI 86 (242)
T ss_dssp CCSEEEECCCCCC
T ss_pred CCeEEEECCcccc
Confidence 4799999999654
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=98.92 E-value=2.2e-09 Score=98.79 Aligned_cols=77 Identities=19% Similarity=0.168 Sum_probs=68.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||++.||+.+++.|+++| .+|++.+|++++++++.++++ ...+.+|++|+++++++++
T Consensus 6 K~~lITGas~GIG~aia~~l~~~G-------~~V~~~~r~~~~l~~~~~~~~------~~~~~~Dv~~~~~v~~~~~~~~ 72 (242)
T d1ulsa_ 6 KAVLITGAAHGIGRATLELFAKEG-------ARLVACDIEEGPLREAAEAVG------AHPVVMDVADPASVERGFAEAL 72 (242)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHTTT------CEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHcC------CeEEEEecCCHHHHHHHHHHHH
Confidence 479999999999999999999998 899999999999998887663 5678999999999998876
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
+.|++||+||...
T Consensus 73 ~~~g~iDilVnnAG~~~ 89 (242)
T d1ulsa_ 73 AHLGRLDGVVHYAGITR 89 (242)
T ss_dssp HHHSSCCEEEECCCCCC
T ss_pred HhcCCceEEEECCcccc
Confidence 4799999999654
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=98.92 E-value=1.8e-09 Score=96.57 Aligned_cols=75 Identities=19% Similarity=0.147 Sum_probs=64.5
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccCe
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKL 91 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~dv 91 (420)
+|+|+|||||+|++++++|++++. .+.++...|++++.+.+ ..+++++.+|+.|.+++.++++++|.
T Consensus 5 tVlVtGatG~iG~~l~~~Ll~~g~-----~v~v~~~~R~~~~~~~~--------~~~~~~~~~d~~~~~~~~~~~~~~d~ 71 (252)
T d2q46a1 5 TVLVTGASGRTGQIVYKKLKEGSD-----KFVAKGLVRSAQGKEKI--------GGEADVFIGDITDADSINPAFQGIDA 71 (252)
T ss_dssp EEEEESTTSTTHHHHHHHHHHTTT-----TCEEEEEESCHHHHHHT--------TCCTTEEECCTTSHHHHHHHHTTCSE
T ss_pred EEEEECCccHHHHHHHHHHHHCCC-----cEEEEEEcCCHHHHHhc--------cCCcEEEEeeecccccccccccccee
Confidence 799999999999999999999873 15677788998876432 24689999999999999999999999
Q ss_pred eEeccCCC
Q 014694 92 LLNCVGPY 99 (420)
Q Consensus 92 VIn~aGp~ 99 (420)
|||+++..
T Consensus 72 vi~~a~~~ 79 (252)
T d2q46a1 72 LVILTSAV 79 (252)
T ss_dssp EEECCCCC
T ss_pred eEEEEeec
Confidence 99999854
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=98.92 E-value=1.7e-09 Score=100.24 Aligned_cols=80 Identities=16% Similarity=0.120 Sum_probs=69.6
Q ss_pred EEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-----
Q 014694 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS----- 87 (420)
Q Consensus 13 IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~----- 87 (420)
+||+||++.||+.+++.|+++| .+|++.+|++++++++.+++.. ...++..+.+|++|+++++++++
T Consensus 4 alITGas~GIG~aia~~la~~G-------a~V~~~~r~~~~l~~~~~~i~~-~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 75 (255)
T d1gega_ 4 ALVTGAGQGIGKAIALRLVKDG-------FAVAIADYNDATAKAVASEINQ-AGGHAVAVKVDVSDRDQVFAAVEQARKT 75 (255)
T ss_dssp EEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEcCCccHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 5999999999999999999998 8999999999999988887742 23467789999999999999876
Q ss_pred --ccCeeEeccCCCC
Q 014694 88 --QTKLLLNCVGPYR 100 (420)
Q Consensus 88 --~~dvVIn~aGp~~ 100 (420)
+.|++||+||...
T Consensus 76 ~g~iDilVnnAG~~~ 90 (255)
T d1gega_ 76 LGGFDVIVNNAGVAP 90 (255)
T ss_dssp TTCCCEEEECCCCCC
T ss_pred hCCccEEEecccccc
Confidence 5799999999543
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.91 E-value=2.8e-09 Score=98.21 Aligned_cols=78 Identities=17% Similarity=0.120 Sum_probs=70.4
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||++.||+.+++.|+++| .+|++.+|++++++++.+++. ++..+.+|++|+++++++++
T Consensus 8 K~~lITGas~GIG~aia~~la~~G-------~~V~~~~r~~~~l~~~~~~~~-----~~~~~~~Dv~d~~~v~~~~~~~g 75 (244)
T d1pr9a_ 8 RRVLVTGAGKGIGRGTVQALHATG-------ARVVAVSRTQADLDSLVRECP-----GIEPVCVDLGDWEATERALGSVG 75 (244)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHST-----TCEEEECCTTCHHHHHHHHTTCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcC-------CEEEEEECCHHHHHHHHHhcC-----CCeEEEEeCCCHHHHHHHHHHhC
Confidence 479999999999999999999998 899999999999999988774 57789999999999999987
Q ss_pred ccCeeEeccCCCC
Q 014694 88 QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ~~dvVIn~aGp~~ 100 (420)
+.|++||+||...
T Consensus 76 ~iDilVnnAg~~~ 88 (244)
T d1pr9a_ 76 PVDLLVNNAAVAL 88 (244)
T ss_dssp CCCEEEECCCCCC
T ss_pred CceEEEecccccc
Confidence 5799999999754
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=98.91 E-value=3.1e-09 Score=102.10 Aligned_cols=102 Identities=14% Similarity=0.132 Sum_probs=78.0
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCH-HHHHHHHh
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDP-PSLHRLCS 87 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~-~sl~~~~~ 87 (420)
++.+|+|+|||||+|++++++|++++ ++|++..|+.++.... .+. ...+++++.+|+.|. +.++.++.
T Consensus 2 ~kktIlVtGatG~iG~~lv~~Ll~~G-------~~V~~l~R~~~~~~~~--~~~--~~~~v~~~~gD~~d~~~~~~~a~~ 70 (350)
T d1xgka_ 2 QKKTIAVVGATGRQGASLIRVAAAVG-------HHVRAQVHSLKGLIAE--ELQ--AIPNVTLFQGPLLNNVPLMDTLFE 70 (350)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTT-------CCEEEEESCSCSHHHH--HHH--TSTTEEEEESCCTTCHHHHHHHHT
T ss_pred CCCEEEEECCChHHHHHHHHHHHhCC-------CeEEEEECCcchhhhh--hhc--ccCCCEEEEeeCCCcHHHHHHHhc
Confidence 34589999999999999999999987 8899999987765321 111 134788999999885 45778889
Q ss_pred ccCeeEeccCCCCCC----cHHHHHHHHHcCC-cEEecC
Q 014694 88 QTKLLLNCVGPYRLH----GDPVAAACVHSGC-DYLDIS 121 (420)
Q Consensus 88 ~~dvVIn~aGp~~~~----~~~vv~Ac~~~g~-~yvdis 121 (420)
++++++....+.... ..++++||.++|+ +++.+|
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~aa~~agv~~~v~~S 109 (350)
T d1xgka_ 71 GAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYS 109 (350)
T ss_dssp TCSEEEECCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEE
T ss_pred CCceEEeecccccchhhhhhhHHHHHHHHhCCCceEEEe
Confidence 999887766544322 4889999999997 555554
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=98.91 E-value=1.3e-09 Score=100.89 Aligned_cols=83 Identities=17% Similarity=0.150 Sum_probs=69.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||++.||+.+|+.|+++| .+|++.+|+.+++++..+++......++..+.+|++|+++++++++
T Consensus 6 K~~lITGas~GIG~aia~~la~~G-------a~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~ 78 (251)
T d1vl8a_ 6 RVALVTGGSRGLGFGIAQGLAEAG-------CSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVK 78 (251)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 469999999999999999999998 8999999999998887766531112457788999999999999876
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
+.|++||+||...
T Consensus 79 ~~~g~iDiLVnnAG~~~ 95 (251)
T d1vl8a_ 79 EKFGKLDTVVNAAGINR 95 (251)
T ss_dssp HHHSCCCEEEECCCCCC
T ss_pred HHcCCCCEEEECCCCCC
Confidence 4799999999643
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=98.90 E-value=1.8e-09 Score=100.11 Aligned_cols=81 Identities=17% Similarity=0.172 Sum_probs=70.6
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh----
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~---- 87 (420)
.+|||||++.||+.+++.|+++| ++|++.+|++++++++.+++.. ...++..+.+|++|+++++++++
T Consensus 4 ValITGas~GIG~aia~~la~~G-------a~V~i~~r~~~~l~~~~~~l~~-~g~~~~~~~~Dvs~~~~v~~~~~~~~~ 75 (257)
T d2rhca1 4 VALVTGATSGIGLEIARRLGKEG-------LRVFVCARGEEGLRTTLKELRE-AGVEADGRTCDVRSVPEIEALVAAVVE 75 (257)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence 46999999999999999999998 8999999999999998887742 23467889999999999999876
Q ss_pred ---ccCeeEeccCCCC
Q 014694 88 ---QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ---~~dvVIn~aGp~~ 100 (420)
+.|++||+||...
T Consensus 76 ~~g~iDilVnnAG~~~ 91 (257)
T d2rhca1 76 RYGPVDVLVNNAGRPG 91 (257)
T ss_dssp HTCSCSEEEECCCCCC
T ss_pred HhCCCCEEEecccccC
Confidence 4799999999654
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=98.90 E-value=5.1e-09 Score=96.36 Aligned_cols=80 Identities=16% Similarity=0.140 Sum_probs=70.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++||||++.||+.+++.|+++| ++|++.+|++++++++.++++ .+...+.+|++|+++++++++
T Consensus 5 K~alITGas~GIG~a~a~~l~~~G-------~~Vv~~~r~~~~l~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~ 73 (243)
T d1q7ba_ 5 KIALVTGASRGIGRAIAETLAARG-------AKVIGTATSENGAQAISDYLG----ANGKGLMLNVTDPASIESVLEKIR 73 (243)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTT-------CEEEEEESSHHHHHHHHHHHG----GGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHhC----CCCcEEEEEecCHHHhhhhhhhhh
Confidence 368999999999999999999998 899999999999999998884 356788999999999998876
Q ss_pred ----ccCeeEeccCCCCC
Q 014694 88 ----QTKLLLNCVGPYRL 101 (420)
Q Consensus 88 ----~~dvVIn~aGp~~~ 101 (420)
..|++||+||....
T Consensus 74 ~~~g~iDilVnnAg~~~~ 91 (243)
T d1q7ba_ 74 AEFGEVDILVNNAGITRD 91 (243)
T ss_dssp HHTCSCSEEEECCCCCCC
T ss_pred cccCCcceehhhhhhccc
Confidence 57999999996543
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=98.90 E-value=5.4e-09 Score=96.61 Aligned_cols=82 Identities=12% Similarity=0.157 Sum_probs=71.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||++.||+.+++.|+++| .+|++.+|++++++++.+++.. ...++..+.+|++|+++++++++
T Consensus 11 KvalITGas~GIG~a~a~~la~~G-------a~V~~~~r~~~~l~~~~~~l~~-~g~~~~~~~~Dvt~~~~v~~~~~~~~ 82 (251)
T d2c07a1 11 KVALVTGAGRGIGREIAKMLAKSV-------SHVICISRTQKSCDSVVDEIKS-FGYESSGYAGDVSKKEEISEVINKIL 82 (251)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTTS-------SEEEEEESSHHHHHHHHHHHHT-TTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcC-------CEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 368999999999999999999998 8999999999999998888753 23467889999999999999886
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
+.|++||++|...
T Consensus 83 ~~~g~iDilvnnag~~~ 99 (251)
T d2c07a1 83 TEHKNVDILVNNAGITR 99 (251)
T ss_dssp HHCSCCCEEEECCCCCC
T ss_pred HhcCCceeeeecccccc
Confidence 5799999999654
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=98.90 E-value=5e-10 Score=108.88 Aligned_cols=95 Identities=17% Similarity=0.214 Sum_probs=68.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcce-EEEEecCh--hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKS-LALAGRNP--TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~-v~iagRs~--~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
|+|+|+|||||+|++++++|++.+ +. +++.++.. .+.+.+ +.+ ....+++++.+|++|.+.+.++++
T Consensus 1 MkILItG~tGfIGs~l~~~L~~~g-------~~vv~~~d~~~~~~~~~~~-~~~--~~~~~~~~~~~Dl~d~~~l~~~~~ 70 (361)
T d1kewa_ 1 MKILITGGAGFIGSAVVRHIIKNT-------QDTVVNIDKLTYAGNLESL-SDI--SESNRYNFEHADICDSAEITRIFE 70 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHC-------SCEEEEEECCCTTCCGGGG-TTT--TTCTTEEEEECCTTCHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-------CCEEEEEeCCCccccHHHH-Hhh--hhcCCcEEEEccCCCHHHHHHHHH
Confidence 689999999999999999999987 44 44444321 111111 112 124578899999999999999987
Q ss_pred --ccCeeEeccCCCCCC----------------cHHHHHHHHHcCC
Q 014694 88 --QTKLLLNCVGPYRLH----------------GDPVAAACVHSGC 115 (420)
Q Consensus 88 --~~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~ 115 (420)
++|+|||||+..... ..+++++|.+.++
T Consensus 71 ~~~~d~VihlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~ 116 (361)
T d1kewa_ 71 QYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWS 116 (361)
T ss_dssp HHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred hCCCCEEEECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 479999999864311 1467888877653
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=98.88 E-value=5.2e-10 Score=107.66 Aligned_cols=105 Identities=12% Similarity=0.180 Sum_probs=75.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC-hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs-~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
|+|+|||||||+|++++++|++++. .+++++.++. ........+.+ ...+++++.+|+.|.+.+.+++..+
T Consensus 3 mkILVTGgtGfIGs~lv~~L~~~g~-----~v~v~~~d~~~~~~~~~~~~~~---~~~~i~~~~~Di~d~~~~~~~~~~~ 74 (346)
T d1oc2a_ 3 KNIIVTGGAGFIGSNFVHYVYNNHP-----DVHVTVLDKLTYAGNKANLEAI---LGDRVELVVGDIADAELVDKLAAKA 74 (346)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCT-----TCEEEEEECCCTTCCGGGTGGG---CSSSEEEEECCTTCHHHHHHHHTTC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCC-----CeEEEEEeCCCccccHHHHHHh---hcCCeEEEEccCCCHHHHHHHHhhh
Confidence 6899999999999999999999972 1445544421 11100111112 2357889999999999999999999
Q ss_pred CeeEeccCCCCCC----------------cHHHHHHHHHcCCcEEecCCc
Q 014694 90 KLLLNCVGPYRLH----------------GDPVAAACVHSGCDYLDISGE 123 (420)
Q Consensus 90 dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~~yvdisge 123 (420)
+.|+|+|+..... ..+++++|...+.+++.++..
T Consensus 75 ~~v~~~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~~k~i~~ss~ 124 (346)
T d1oc2a_ 75 DAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTD 124 (346)
T ss_dssp SEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEG
T ss_pred hhhhhhhhcccccchhhCcccceeeehHhHHhhhhhhccccccccccccc
Confidence 9999999865321 267788888888887776544
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=98.88 E-value=3.4e-09 Score=98.49 Aligned_cols=83 Identities=13% Similarity=0.082 Sum_probs=69.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~-~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..+||+||++.||+.+++.|+++| .+|++.+|+.+++++..+++.. ....++..+.+|++|+++++++++
T Consensus 5 K~alITGas~GIG~aia~~la~~G-------a~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~ 77 (258)
T d1iy8a_ 5 RVVLITGGGSGLGRATAVRLAAEG-------AKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTAT 77 (258)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHH
Confidence 369999999999999999999998 8999999999999887766532 123456778999999999998876
Q ss_pred -----ccCeeEeccCCCC
Q 014694 88 -----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (420)
+.|++||+||...
T Consensus 78 ~~~~G~iDiLVnnAG~~~ 95 (258)
T d1iy8a_ 78 TERFGRIDGFFNNAGIEG 95 (258)
T ss_dssp HHHHSCCSEEEECCCCCC
T ss_pred HHHhCCCCEEEECCcccc
Confidence 5799999999653
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=98.87 E-value=6e-09 Score=95.73 Aligned_cols=88 Identities=20% Similarity=0.207 Sum_probs=69.8
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh----
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~---- 87 (420)
-||||||++.||+.+++.|+++|-.-......|++.+|+.++++++.+++.. ...++..+.+|++|+++++++++
T Consensus 3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~-~g~~~~~~~~Dvt~~~~v~~~~~~~~~ 81 (240)
T d2bd0a1 3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRA-EGALTDTITADISDMADVRRLTTHIVE 81 (240)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHT-TTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 3789999999999999999999821000012489999999999999888752 23467789999999999998876
Q ss_pred ---ccCeeEeccCCCC
Q 014694 88 ---QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ---~~dvVIn~aGp~~ 100 (420)
+.|++||+||...
T Consensus 82 ~~g~iDilvnnAg~~~ 97 (240)
T d2bd0a1 82 RYGHIDCLVNNAGVGR 97 (240)
T ss_dssp HTSCCSEEEECCCCCC
T ss_pred HcCCcceeeccccccc
Confidence 4799999999654
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.87 E-value=1.8e-09 Score=101.12 Aligned_cols=80 Identities=25% Similarity=0.272 Sum_probs=69.4
Q ss_pred EEEEcCCcHHHHHHHHHHHHh-CCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh----
Q 014694 13 VIILGASGFTGKYVVREALKL-FNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (420)
Q Consensus 13 IvV~GATG~~G~~va~~L~~~-~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~---- 87 (420)
.|||||++.||+.+++.|++. + .+|++++|+.++++++.+++.. ...++.++.+|++|.++++++++
T Consensus 6 AlVTGas~GIG~a~A~~la~~~g-------~~Vi~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dvs~~~sv~~~~~~~~~ 77 (275)
T d1wmaa1 6 ALVTGGNKGIGLAIVRDLCRLFS-------GDVVLTARDVTRGQAAVQQLQA-EGLSPRFHQLDIDDLQSIRALRDFLRK 77 (275)
T ss_dssp EEESSCSSHHHHHHHHHHHHHSS-------SEEEEEESSHHHHHHHHHHHHH-TTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred EEECCCCCHHHHHHHHHHHHhCC-------CEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEEecCCHHHHHHHHHHHHH
Confidence 499999999999999999987 5 7999999999999999888752 24568899999999999988865
Q ss_pred ---ccCeeEeccCCCC
Q 014694 88 ---QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ---~~dvVIn~aGp~~ 100 (420)
+.|++||+||...
T Consensus 78 ~~g~iDiLVnNAGi~~ 93 (275)
T d1wmaa1 78 EYGGLDVLVNNAGIAF 93 (275)
T ss_dssp HHSSEEEEEECCCCCC
T ss_pred hcCCcEEEEEcCCcCC
Confidence 5799999999653
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.87 E-value=3.5e-09 Score=98.05 Aligned_cols=84 Identities=17% Similarity=0.104 Sum_probs=72.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~-~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..++||||++.||+.+++.|+++| .+|++.+|+.++++++.+++... ...++..+.+|++|+++++++++
T Consensus 4 KvalITGas~GIG~aia~~la~~G-------a~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 76 (254)
T d2gdza1 4 KVALVTGAAQGIGRAFAEALLLKG-------AKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKV 76 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHH
Confidence 368999999999999999999998 89999999999999988887531 22356778999999999999876
Q ss_pred -----ccCeeEeccCCCCC
Q 014694 88 -----QTKLLLNCVGPYRL 101 (420)
Q Consensus 88 -----~~dvVIn~aGp~~~ 101 (420)
+.|++||+||....
T Consensus 77 ~~~~G~iDilVnnAg~~~~ 95 (254)
T d2gdza1 77 VDHFGRLDILVNNAGVNNE 95 (254)
T ss_dssp HHHHSCCCEEEECCCCCCS
T ss_pred HHHcCCcCeeccccccccc
Confidence 57999999998654
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=98.87 E-value=2.3e-09 Score=100.29 Aligned_cols=83 Identities=20% Similarity=0.223 Sum_probs=71.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCC--CCCCccEEEEeCCCHHHHHHHHh-
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS--HSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~--~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
..+||+||++.||+.+|+.|+++| .+|++.+|++++++++.+++... ...++..+.+|++|+++++++++
T Consensus 6 K~alVTGas~GIG~aia~~la~~G-------a~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~ 78 (272)
T d1xkqa_ 6 KTVIITGSSNGIGRTTAILFAQEG-------ANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINS 78 (272)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHH
T ss_pred CEEEEeCcCcHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHH
Confidence 369999999999999999999998 89999999999999988877431 12346789999999999999876
Q ss_pred ------ccCeeEeccCCCC
Q 014694 88 ------QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (420)
+.|++||+||...
T Consensus 79 ~~~~~g~iDilvnnAG~~~ 97 (272)
T d1xkqa_ 79 TLKQFGKIDVLVNNAGAAI 97 (272)
T ss_dssp HHHHHSCCCEEEECCCCCC
T ss_pred HHHHhCCceEEEeCCcccC
Confidence 5799999999654
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=98.86 E-value=2.4e-09 Score=99.34 Aligned_cols=82 Identities=18% Similarity=0.105 Sum_probs=71.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++||||++.||+.+|+.|+++| .+|++.+|++++++++.+++.. ...++..+.+|++|+++++++++
T Consensus 12 K~alITGas~GIG~aia~~la~~G-------a~V~~~~r~~~~~~~~~~~l~~-~g~~~~~~~~Dvs~~~~~~~~~~~~~ 83 (255)
T d1fmca_ 12 KCAIITGAGAGIGKEIAITFATAG-------ASVVVSDINADAANHVVDEIQQ-LGGQAFACRCDITSEQELSALADFAI 83 (255)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTTT-------CEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHH-cCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 8999999999999998887742 23467789999999999988875
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
..|++||+||...
T Consensus 84 ~~~g~iDilvnnAG~~~ 100 (255)
T d1fmca_ 84 SKLGKVDILVNNAGGGG 100 (255)
T ss_dssp HHHSSCCEEEECCCCCC
T ss_pred HHcCCCCEeeeCCcCCC
Confidence 5799999999653
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=98.86 E-value=4.9e-09 Score=97.09 Aligned_cols=79 Identities=15% Similarity=0.073 Sum_probs=70.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..+||+||++.||+.+++.|+++| .+|++.+|++++++++.++++ .+..++.+|++|+++++++++
T Consensus 7 K~alITGas~GIG~aia~~la~~G-------a~V~~~~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~~~~~~~~~~ 75 (253)
T d1hxha_ 7 KVALVTGGASGVGLEVVKLLLGEG-------AKVAFSDINEAAGQQLAAELG----ERSMFVRHDVSSEADWTLVMAAVQ 75 (253)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT-------CEEEEECSCHHHHHHHHHHHC----TTEEEECCCTTCHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHhC----CCeEEEEeecCCHHHHHHHHHHHH
Confidence 469999999999999999999998 899999999999999999885 456778899999999998876
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
+.|++||+||...
T Consensus 76 ~~~g~iDilVnnAG~~~ 92 (253)
T d1hxha_ 76 RRLGTLNVLVNNAGILL 92 (253)
T ss_dssp HHHCSCCEEEECCCCCC
T ss_pred HHhCCCCeEEecccccC
Confidence 4799999999754
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=98.84 E-value=4.8e-09 Score=96.40 Aligned_cols=78 Identities=15% Similarity=0.165 Sum_probs=69.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..+||+||++.||+.+|+.|++++ ++|++.+|+.++++++.++++ .++.++++|++|+++++++++
T Consensus 6 K~alItGas~GIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dls~~~~i~~~~~~i~ 74 (241)
T d2a4ka1 6 KTILVTGAASGIGRAALDLFAREG-------ASLVAVDREERLLAEAVAALE----AEAIAVVADVSDPKAVEAVFAEAL 74 (241)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHTCC----SSEEEEECCTTSHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHcC----CceEEEEecCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 899999999999998888774 467789999999999988876
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
+.|++||+||..
T Consensus 75 ~~~g~iDiLinnAg~~ 90 (241)
T d2a4ka1 75 EEFGRLHGVAHFAGVA 90 (241)
T ss_dssp HHHSCCCEEEEGGGGT
T ss_pred HHhCCccEeccccccc
Confidence 479999999864
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=98.84 E-value=4.3e-09 Score=97.76 Aligned_cols=82 Identities=18% Similarity=0.203 Sum_probs=70.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..+|||||++.||+.+++.|++++ .+|++.+|++++++++.+++.. ...++..+.+|++|+++++++++
T Consensus 9 K~alITGas~GIG~aia~~la~~G-------a~V~~~~r~~~~l~~~~~~~~~-~g~~~~~~~~Dv~~~~~v~~~~~~~~ 80 (259)
T d2ae2a_ 9 CTALVTGGSRGIGYGIVEELASLG-------ASVYTCSRNQKELNDCLTQWRS-KGFKVEASVCDLSSRSERQELMNTVA 80 (259)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHH-TTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHh-cCCCceEEEeeCCCHHHHHHHHHHHH
Confidence 469999999999999999999998 8999999999999998887742 23456788999999999988764
Q ss_pred -----ccCeeEeccCCCC
Q 014694 88 -----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (420)
..|++||+||...
T Consensus 81 ~~~~~~idilvnnAG~~~ 98 (259)
T d2ae2a_ 81 NHFHGKLNILVNNAGIVI 98 (259)
T ss_dssp HHTTTCCCEEEECCCCCC
T ss_pred HHhCCCceEEEECCceec
Confidence 3699999999654
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.83 E-value=4.5e-09 Score=100.59 Aligned_cols=110 Identities=12% Similarity=0.133 Sum_probs=82.4
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEec----ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHH
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR----NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHR 84 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagR----s~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~ 84 (420)
.+.+|||||||||+|++++++|.+.+ ++|.+++| +...++.+..........++.++.+|..|...+..
T Consensus 15 ~~k~iLVTG~tGfIGs~lv~~L~~~g-------~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~ 87 (341)
T d1sb8a_ 15 QPKVWLITGVAGFIGSNLLETLLKLD-------QKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNN 87 (341)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHH
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCc-------CEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccc
Confidence 34579999999999999999999998 78998886 22333333222211112467889999999999999
Q ss_pred HHhccCeeEeccCCCCCC----------------cHHHHHHHHHcCC-cEEecCCcHH
Q 014694 85 LCSQTKLLLNCVGPYRLH----------------GDPVAAACVHSGC-DYLDISGEPE 125 (420)
Q Consensus 85 ~~~~~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~-~yvdisge~~ 125 (420)
.....++|+|+++..... ..+++++|.++++ ++|.+|....
T Consensus 88 ~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~v 145 (341)
T d1sb8a_ 88 ACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSST 145 (341)
T ss_dssp HHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGG
T ss_pred ccccccccccccccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEccccee
Confidence 999999999998754321 2778999999998 6777765443
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=98.83 E-value=2.4e-09 Score=99.52 Aligned_cols=83 Identities=11% Similarity=0.084 Sum_probs=69.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..+|||||++.||+.+++.|+++| ++|++.+|+.++++++.+++......++..+.+|++|+++++++++
T Consensus 10 K~alITGas~GIG~aia~~la~~G-------a~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~ 82 (260)
T d1h5qa_ 10 KTIIVTGGNRGIGLAFTRAVAAAG-------ANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQID 82 (260)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTT-------EEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 8999999999988777665521113467789999999999999886
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
..|++||+||...
T Consensus 83 ~~~g~iDilVnnAg~~~ 99 (260)
T d1h5qa_ 83 ADLGPISGLIANAGVSV 99 (260)
T ss_dssp HHSCSEEEEEECCCCCC
T ss_pred HHhCCCcEecccccccc
Confidence 4799999999643
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.82 E-value=7.9e-09 Score=98.93 Aligned_cols=98 Identities=16% Similarity=0.198 Sum_probs=73.0
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEec------C----hhHHHHHHHHhCCCCCCCccEEEEeCCCHHH
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR------N----PTRVKQALQWASPSHSLSIPILTADTTDPPS 81 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagR------s----~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~s 81 (420)
+|+|||||||+|++++++|++.+ ++|.+.+| + .+.++.+. .+. ..++.++.+|++|.+.
T Consensus 4 KILITG~tGfIGs~lv~~Ll~~g-------~~V~~ld~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~Dl~d~~~ 72 (346)
T d1ek6a_ 4 KVLVTGGAGYIGSHTVLELLEAG-------YLPVVIDNFHNAFRGGGSLPESLRRVQ-ELT---GRSVEFEEMDILDQGA 72 (346)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-------CCEEEEECSSSSCBCSSSSBHHHHHHH-HHH---TCCCEEEECCTTCHHH
T ss_pred eEEEECCCcHHHHHHHHHHHHCc-------CEEEEEECCCccccccccchHHHHHHH-Hhc---CCCcEEEEeecccccc
Confidence 79999999999999999999987 68888763 1 22333222 221 3578999999999999
Q ss_pred HHHHHhccC--eeEeccCCCCCC----------------cHHHHHHHHHcCCc-EEec
Q 014694 82 LHRLCSQTK--LLLNCVGPYRLH----------------GDPVAAACVHSGCD-YLDI 120 (420)
Q Consensus 82 l~~~~~~~d--vVIn~aGp~~~~----------------~~~vv~Ac~~~g~~-yvdi 120 (420)
+.+++...+ +++|+|+..... ..+++++|.++++. ++.+
T Consensus 73 l~~~~~~~~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ 130 (346)
T d1ek6a_ 73 LQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFS 130 (346)
T ss_dssp HHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred ccccccccccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcCccccccc
Confidence 999988654 788999854321 16788888888874 4444
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.82 E-value=2.5e-10 Score=108.65 Aligned_cols=98 Identities=12% Similarity=0.122 Sum_probs=67.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh-HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT-RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~-kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
.+|+|+|||||+|++++++|++++ ++|.+++|... +.+.+ .... ...++++.. .+.++.++.++
T Consensus 2 KKIlVtG~sGfiG~~lv~~L~~~g-------~~V~~~d~~~~~~~~~~-~~~~--~~~~~d~~~-----~~~~~~~~~~~ 66 (312)
T d2b69a1 2 KRILITGGAGFVGSHLTDKLMMDG-------HEVTVVDNFFTGRKRNV-EHWI--GHENFELIN-----HDVVEPLYIEV 66 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEECCSSCCGGGT-GGGT--TCTTEEEEE-----CCTTSCCCCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCc-------CEEEEEeCCCcCCHHHH-HHhc--CCCceEEEe-----hHHHHHHHcCC
Confidence 479999999999999999999987 78988887322 22111 1111 122333333 33455566789
Q ss_pred CeeEeccCCCCC----C------------cHHHHHHHHHcCCcEEecCCc
Q 014694 90 KLLLNCVGPYRL----H------------GDPVAAACVHSGCDYLDISGE 123 (420)
Q Consensus 90 dvVIn~aGp~~~----~------------~~~vv~Ac~~~g~~yvdisge 123 (420)
|+|||+|+.... . ..+++++|.+.++++|.+|..
T Consensus 67 d~VihlAa~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~k~I~~SS~ 116 (312)
T d2b69a1 67 DQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTS 116 (312)
T ss_dssp SEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEG
T ss_pred CEEEECcccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECh
Confidence 999999986442 1 268899999999998887643
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=98.82 E-value=3.8e-09 Score=98.96 Aligned_cols=83 Identities=23% Similarity=0.256 Sum_probs=70.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCC--CCCCccEEEEeCCCHHHHHHHHh-
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS--HSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~--~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
..++||||++.||+.+|+.|+++| .+|++.+|++++++++.+++... ...++..+.+|++|+++++++++
T Consensus 5 K~alITGas~GIG~aia~~la~~G-------a~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 77 (274)
T d1xhla_ 5 KSVIITGSSNGIGRSAAVIFAKEG-------AQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINT 77 (274)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHH
Confidence 469999999999999999999998 89999999999999888877421 12356789999999999998876
Q ss_pred ------ccCeeEeccCCCC
Q 014694 88 ------QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (420)
+.|++||+||...
T Consensus 78 ~~~~~G~iDilVnnAG~~~ 96 (274)
T d1xhla_ 78 TLAKFGKIDILVNNAGANL 96 (274)
T ss_dssp HHHHHSCCCEEEECCCCCC
T ss_pred HHHHcCCceEEEeeccccc
Confidence 4799999999643
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=98.82 E-value=1.2e-09 Score=101.62 Aligned_cols=87 Identities=14% Similarity=0.263 Sum_probs=66.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~-- 88 (420)
|+|||+|||||+|++++++|.+.+ . +..++++... +.+|++|.+.+++.+++
T Consensus 1 MKILItG~tGfiG~~l~~~L~~~g-------~-~v~~~~~~~~------------------~~~Dl~~~~~~~~~i~~~~ 54 (298)
T d1n2sa_ 1 MNILLFGKTGQVGWELQRSLAPVG-------N-LIALDVHSKE------------------FCGDFSNPKGVAETVRKLR 54 (298)
T ss_dssp CEEEEECTTSHHHHHHHHHTTTTS-------E-EEEECTTCSS------------------SCCCTTCHHHHHHHHHHHC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC-------C-EEEEECCCcc------------------ccCcCCCHHHHHHHHHHcC
Confidence 789999999999999999998876 3 4444443211 23689999999999985
Q ss_pred cCeeEeccCCCCCC----------------cHHHHHHHHHcCCcEEecCCc
Q 014694 89 TKLLLNCVGPYRLH----------------GDPVAAACVHSGCDYLDISGE 123 (420)
Q Consensus 89 ~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~~yvdisge 123 (420)
+|+||||||..... ...++++|.+.+++++.+|..
T Consensus 55 ~D~Vih~Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ss~ 105 (298)
T d1n2sa_ 55 PDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTD 105 (298)
T ss_dssp CSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTCEEEEEEEG
T ss_pred CCEEEEecccccccccccCccccccccccccccchhhhhcccccccccccc
Confidence 59999999854311 267888998888887777654
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=98.81 E-value=7e-09 Score=96.30 Aligned_cols=84 Identities=18% Similarity=0.159 Sum_probs=71.2
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
...++|+||++.||+.+++.|+++| .+|++.+|++++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 6 gK~alITGas~GIG~aia~~la~~G-------~~V~i~~r~~~~l~~~~~~~~~-~~~~~~~~~~D~s~~~~~~~~~~~~ 77 (258)
T d1ae1a_ 6 GTTALVTGGSKGIGYAIVEELAGLG-------ARVYTCSRNEKELDECLEIWRE-KGLNVEGSVCDLLSRTERDKLMQTV 77 (258)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHh-cCCCceEEEeecCCHHHHHHHHHHH
Confidence 4579999999999999999999998 8999999999999988887742 23466788999999999988765
Q ss_pred ------ccCeeEeccCCCCC
Q 014694 88 ------QTKLLLNCVGPYRL 101 (420)
Q Consensus 88 ------~~dvVIn~aGp~~~ 101 (420)
..|+|||++|....
T Consensus 78 ~~~~~g~idilinnag~~~~ 97 (258)
T d1ae1a_ 78 AHVFDGKLNILVNNAGVVIH 97 (258)
T ss_dssp HHHTTSCCCEEEECCCCCCC
T ss_pred HHHhCCCcEEEecccccccc
Confidence 26899999997543
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=98.81 E-value=3.1e-09 Score=98.92 Aligned_cols=82 Identities=20% Similarity=0.218 Sum_probs=69.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCC--CCCCccEEEEeCCCHHHHHHHHh-
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS--HSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~--~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
..+||+||++.||+.++++|+++| .+|++.+|++++++++.+++... ...++..+.+|++|+++++++++
T Consensus 6 KvalVTGas~GIG~aia~~la~~G-------a~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~ 78 (264)
T d1spxa_ 6 KVAIITGSSNGIGRATAVLFAREG-------AKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILST 78 (264)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHH
T ss_pred CEEEEeCcCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHH
Confidence 368999999999999999999998 89999999999999888876421 12347789999999999999876
Q ss_pred ------ccCeeEeccCCC
Q 014694 88 ------QTKLLLNCVGPY 99 (420)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (420)
+.|++||+||..
T Consensus 79 ~~~~~g~iDilvnnAG~~ 96 (264)
T d1spxa_ 79 TLGKFGKLDILVNNAGAA 96 (264)
T ss_dssp HHHHHSCCCEEEECCC--
T ss_pred HHHHhCCCCEeecccccc
Confidence 579999999964
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=98.81 E-value=5.1e-09 Score=98.66 Aligned_cols=84 Identities=17% Similarity=0.149 Sum_probs=70.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..+||+|||+.||+.+|+.|+++| .+|++.+|+.+++++..+++......++..+.+|++|++++++++.
T Consensus 26 K~alITGas~GIG~aiA~~la~~G-------a~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~ 98 (294)
T d1w6ua_ 26 KVAFITGGGTGLGKGMTTLLSSLG-------AQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELI 98 (294)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcC-------CEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhh
Confidence 469999999999999999999998 8999999999998887776632113466789999999999988765
Q ss_pred ----ccCeeEeccCCCCC
Q 014694 88 ----QTKLLLNCVGPYRL 101 (420)
Q Consensus 88 ----~~dvVIn~aGp~~~ 101 (420)
+.|++||++|....
T Consensus 99 ~~~g~iDilvnnAg~~~~ 116 (294)
T d1w6ua_ 99 KVAGHPNIVINNAAGNFI 116 (294)
T ss_dssp HHTCSCSEEEECCCCCCC
T ss_pred hhccccchhhhhhhhccc
Confidence 57999999997543
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=98.80 E-value=7.2e-09 Score=96.18 Aligned_cols=83 Identities=13% Similarity=0.159 Sum_probs=67.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC-hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs-~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..++||||++.||+.+|++|+++| .+|++.+|+ .++++++.+++......++.++.+|++|+++++++++
T Consensus 5 K~alITGas~GIG~aiA~~la~~G-------a~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~ 77 (260)
T d1x1ta1 5 KVAVVTGSTSGIGLGIATALAAQG-------ADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNA 77 (260)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTT-------CEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence 468999999999999999999998 899999997 4667666655421113467788999999999999886
Q ss_pred -----ccCeeEeccCCCC
Q 014694 88 -----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (420)
+.|++||+||...
T Consensus 78 ~~~~G~iDiLVnnAG~~~ 95 (260)
T d1x1ta1 78 VRQMGRIDILVNNAGIQH 95 (260)
T ss_dssp HHHHSCCSEEEECCCCCC
T ss_pred HHHhCCCcEEEeeccccc
Confidence 4799999999654
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.80 E-value=8.2e-09 Score=97.81 Aligned_cols=83 Identities=20% Similarity=0.259 Sum_probs=70.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC----CCCCCccEEEEeCCCHHHHHHHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP----SHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~----~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
..+|||||++.||+.+|+.|+++| .+|++.+|+.+++++..+++.. ....++..+.+|++|++++++++
T Consensus 13 KvalITGas~GIG~aia~~la~~G-------a~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~ 85 (297)
T d1yxma1 13 QVAIVTGGATGIGKAIVKELLELG-------SNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLV 85 (297)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHH
Confidence 469999999999999999999998 8999999999999888877632 12346778899999999999987
Q ss_pred h-------ccCeeEeccCCCC
Q 014694 87 S-------QTKLLLNCVGPYR 100 (420)
Q Consensus 87 ~-------~~dvVIn~aGp~~ 100 (420)
+ +.|++||+||...
T Consensus 86 ~~~~~~~G~iDiLVnnAg~~~ 106 (297)
T d1yxma1 86 KSTLDTFGKINFLVNNGGGQF 106 (297)
T ss_dssp HHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHhCCeEEEEeeccccc
Confidence 6 5799999999643
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=98.79 E-value=8.2e-09 Score=96.69 Aligned_cols=79 Identities=14% Similarity=0.130 Sum_probs=70.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++||||++.||+.+++.|+++| .+|++.+|++++++++.++++ .++..+.+|++|+++++++++
T Consensus 6 K~alITGas~GIG~aia~~la~~G-------a~V~i~~r~~~~l~~~~~~~~----~~~~~~~~Dv~~~~~~~~~~~~~~ 74 (276)
T d1bdba_ 6 EAVLITGGASGLGRALVDRFVAEG-------AKVAVLDKSAERLAELETDHG----DNVLGIVGDVRSLEDQKQAASRCV 74 (276)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHG----GGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHcC----CCeeEEecccccHHHHHHHHHHHH
Confidence 479999999999999999999998 899999999999999888774 467889999999999998876
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
..|++||+||...
T Consensus 75 ~~~g~idilvnnAG~~~ 91 (276)
T d1bdba_ 75 ARFGKIDTLIPNAGIWD 91 (276)
T ss_dssp HHHSCCCEEECCCCCCC
T ss_pred HHhCCcccccccccccC
Confidence 5799999999643
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.79 E-value=4e-09 Score=100.80 Aligned_cols=104 Identities=16% Similarity=0.195 Sum_probs=73.3
Q ss_pred eE-EEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh-----HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 014694 12 DV-IILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT-----RVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 12 ~I-vV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~-----kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~ 85 (420)
+| +|||||||+|++++++|++.+ ++|..++|..+ +++.+..........+++++.+|++|++.+.++
T Consensus 2 KI~LVTG~tGfIG~~l~~~Ll~~g-------~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 74 (347)
T d1t2aa_ 2 NVALITGITGQDGSYLAEFLLEKG-------YEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKI 74 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHH
T ss_pred CEEEEecCCcHHHHHHHHHHHHCc-------CEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHH
Confidence 58 999999999999999999988 89999998542 232222111101124678999999999999999
Q ss_pred Hhc--cCeeEeccCCCCCC----------------cHHHHHHHHHcCC----cEEecCC
Q 014694 86 CSQ--TKLLLNCVGPYRLH----------------GDPVAAACVHSGC----DYLDISG 122 (420)
Q Consensus 86 ~~~--~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~----~yvdisg 122 (420)
+.+ .++|+|+++..... ..+++++|.+++. ++|.+|.
T Consensus 75 ~~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS 133 (347)
T d1t2aa_ 75 INEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQAST 133 (347)
T ss_dssp HHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEE
T ss_pred HhhcccceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecc
Confidence 875 56888888754321 1567888888776 4777663
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=98.78 E-value=6.1e-09 Score=95.96 Aligned_cols=81 Identities=22% Similarity=0.235 Sum_probs=67.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..||||||++.||+.++++|++++. .++|++.+|+.++++++.+.. ..++.++.+|++|.++++++++
T Consensus 4 KtilITGassGIG~a~a~~la~~G~-----~~~Vi~~~R~~~~~~~l~~~~----~~~~~~~~~Dvs~~~~v~~~~~~i~ 74 (250)
T d1yo6a1 4 GSVVVTGANRGIGLGLVQQLVKDKN-----IRHIIATARDVEKATELKSIK----DSRVHVLPLTVTCDKSLDTFVSKVG 74 (250)
T ss_dssp SEEEESSCSSHHHHHHHHHHHTCTT-----CCEEEEEESSGGGCHHHHTCC----CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC-----CCEEEEEeCCHHHHHHHHHhh----CCceEEEEEecCCHHHHHHHHHHHH
Confidence 4799999999999999999999872 157888999999988765432 3578899999999999988764
Q ss_pred ------ccCeeEeccCCCC
Q 014694 88 ------QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (420)
..|++||+||...
T Consensus 75 ~~~~~~~idilinnAG~~~ 93 (250)
T d1yo6a1 75 EIVGSDGLSLLINNAGVLL 93 (250)
T ss_dssp HHHGGGCCCEEEECCCCCC
T ss_pred HHhCCCCeEEEEEcCcccC
Confidence 2799999999654
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=98.78 E-value=6.2e-09 Score=96.68 Aligned_cols=83 Identities=18% Similarity=0.244 Sum_probs=70.2
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
...+||+||++.||+.+++.|+++| .+|++.+|++++++++.+++.. ...++..+.+|++|+++++++++
T Consensus 8 gK~alVTGas~GIG~aiA~~la~~G-------a~V~~~~r~~~~l~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~ 79 (259)
T d1xq1a_ 8 AKTVLVTGGTKGIGHAIVEEFAGFG-------AVIHTCARNEYELNECLSKWQK-KGFQVTGSVCDASLRPEREKLMQTV 79 (259)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHh-cCCceEEEeccCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 8999999999999998887742 23467889999999999888764
Q ss_pred ------ccCeeEeccCCCC
Q 014694 88 ------QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (420)
..|++||+||...
T Consensus 80 ~~~~~g~idilvnnAG~~~ 98 (259)
T d1xq1a_ 80 SSMFGGKLDILINNLGAIR 98 (259)
T ss_dssp HHHHTTCCSEEEEECCC--
T ss_pred HHHhCCCcccccccccccC
Confidence 3799999999643
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.78 E-value=1.8e-08 Score=86.79 Aligned_cols=107 Identities=16% Similarity=0.209 Sum_probs=87.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
.+|+|+|| |++|+.++++|.+++ ++|.+++|+.++++++.+.+. .......+..+...+...+...|
T Consensus 3 K~IliiGa-G~~G~~~a~~L~~~g-------~~V~v~dr~~~~a~~l~~~~~-----~~~~~~~~~~~~~~~~~~i~~~~ 69 (182)
T d1e5qa1 3 KSVLMLGS-GFVTRPTLDVLTDSG-------IKVTVACRTLESAKKLSAGVQ-----HSTPISLDVNDDAALDAEVAKHD 69 (182)
T ss_dssp CEEEEECC-STTHHHHHHHHHTTT-------CEEEEEESCHHHHHHHHTTCT-----TEEEEECCTTCHHHHHHHHTTSS
T ss_pred CEEEEECC-CHHHHHHHHHHHhCC-------CEEEEEECChHHHHHHHhccc-----ccccccccccchhhhHhhhhccc
Confidence 37999997 999999999999987 899999999999988877553 34455567778888889999999
Q ss_pred eeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHHHHHHHH
Q 014694 91 LLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEA 132 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~~~~~~~ 132 (420)
++|++. |+. ....++..|.+.++|++|++...+.++.+.+
T Consensus 70 ~~i~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 109 (182)
T d1e5qa1 70 LVISLI-PYT-FHATVIKSAIRQKKHVVTTSYVSPAMMELDQ 109 (182)
T ss_dssp EEEECS-CGG-GHHHHHHHHHHHTCEEECSSCCCHHHHHTHH
T ss_pred eeEeec-cch-hhhHHHHHHHhhccceeecccCcHHHHHHHH
Confidence 999776 433 3467889999999999999988777766554
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=98.76 E-value=4.3e-08 Score=90.16 Aligned_cols=79 Identities=16% Similarity=0.233 Sum_probs=66.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhH-HHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR-VKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~k-l~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..++|+||++.||+.+++.|+++| ++|++.+|++++ .++..++. ..++..+.+|++|+++++++++
T Consensus 6 KvalVTGas~GIG~aia~~la~~G-------a~V~~~~~~~~~~~~~~~~~~----g~~~~~~~~Dvs~~~~v~~~~~~~ 74 (247)
T d2ew8a1 6 KLAVITGGANGIGRAIAERFAVEG-------ADIAIADLVPAPEAEAAIRNL----GRRVLTVKCDVSQPGDVEAFGKQV 74 (247)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESSCCHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECCchHHHHHHHHHc----CCcEEEEEeeCCCHHHHHHHHHHH
Confidence 369999999999999999999998 899999998643 44444554 3567889999999999999876
Q ss_pred -----ccCeeEeccCCCC
Q 014694 88 -----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (420)
..|++||+||...
T Consensus 75 ~~~~G~iDilVnnAG~~~ 92 (247)
T d2ew8a1 75 ISTFGRCDILVNNAGIYP 92 (247)
T ss_dssp HHHHSCCCEEEECCCCCC
T ss_pred HHHcCCCCEEEECCCCCC
Confidence 5799999999754
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=98.75 E-value=1.7e-08 Score=92.87 Aligned_cols=82 Identities=15% Similarity=0.111 Sum_probs=67.5
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEE-ecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA-GRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~ia-gRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
-|+|+||++.||+.++++|+++| .+|++. .|++++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 3 V~lITGas~GIG~a~a~~la~~G-------a~V~i~~~~~~~~~~~~~~~~~~-~g~~~~~~~~Dv~~~~~v~~~~~~~~ 74 (244)
T d1edoa_ 3 VVVVTGASRGIGKAIALSLGKAG-------CKVLVNYARSAKAAEEVSKQIEA-YGGQAITFGGDVSKEADVEAMMKTAI 74 (244)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTT-------CEEEEEESSCHHHHHHHHHHHHH-HTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEeCCCHHHHHHHHHHHHH-cCCcEEEEeCCCCCHHHHHHHHHHHH
Confidence 48999999999999999999998 789886 5677788777776631 13467789999999999999876
Q ss_pred ----ccCeeEeccCCCCC
Q 014694 88 ----QTKLLLNCVGPYRL 101 (420)
Q Consensus 88 ----~~dvVIn~aGp~~~ 101 (420)
+.|++||+||....
T Consensus 75 ~~~g~iDiLVnnAg~~~~ 92 (244)
T d1edoa_ 75 DAWGTIDVVVNNAGITRD 92 (244)
T ss_dssp HHSSCCSEEEECCCCCCC
T ss_pred HHcCCCCccccccccccc
Confidence 57999999997543
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=98.75 E-value=8.6e-09 Score=95.86 Aligned_cols=82 Identities=16% Similarity=0.094 Sum_probs=68.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh-hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~-~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..++|+||++.||+.+|+.|++++ .+|++.+|+. ++++++.+++.. ...++..+.+|++|+++++++++
T Consensus 8 K~alITGas~GIG~aia~~la~~G-------~~Vv~~~r~~~~~~~~~~~~~~~-~g~~~~~~~~Dvt~~~~v~~~~~~~ 79 (261)
T d1geea_ 8 KVVVITGSSTGLGKSMAIRFATEK-------AKVVVNYRSKEDEANSVLEEIKK-VGGEAIAVKGDVTVESDVINLVQSA 79 (261)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTT-------CEEEEEESSCHHHHHHHHHHHHH-TTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEeCCcHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHH
Confidence 469999999999999999999998 8999999985 467666666532 23467789999999999999876
Q ss_pred -----ccCeeEeccCCCC
Q 014694 88 -----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (420)
+.|++||+||...
T Consensus 80 ~~~~G~iDiLVnnAG~~~ 97 (261)
T d1geea_ 80 IKEFGKLDVMINNAGLEN 97 (261)
T ss_dssp HHHHSCCCEEEECCCCCC
T ss_pred HHHhCCCCEeeccceecC
Confidence 5799999999754
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=98.73 E-value=4.9e-09 Score=99.73 Aligned_cols=83 Identities=19% Similarity=0.150 Sum_probs=61.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh-----hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-----TRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~-----~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~ 85 (420)
.+++|||||||+|++++++|++++ ++|+.++|.. ++++.+...........+.++.+|+.+.+.+.+.
T Consensus 2 k~~LVTGatGfiG~~lv~~Ll~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~ 74 (339)
T d1n7ha_ 2 KIALITGITGQDGSYLTEFLLGKG-------YEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRW 74 (339)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHH
T ss_pred CEEEEeCCccHHHHHHHHHHHHCc-------CEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHH
Confidence 479999999999999999999998 8999999853 2332221111101234577899999999999998
Q ss_pred Hh--ccCeeEeccCCCC
Q 014694 86 CS--QTKLLLNCVGPYR 100 (420)
Q Consensus 86 ~~--~~dvVIn~aGp~~ 100 (420)
++ ++|+|||+|+...
T Consensus 75 ~~~~~~D~Vih~Aa~~~ 91 (339)
T d1n7ha_ 75 IDVIKPDEVYNLAAQSH 91 (339)
T ss_dssp HHHHCCSEEEECCSCCC
T ss_pred Hhhhccchhhhcccccc
Confidence 86 5699999999754
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=98.71 E-value=3.4e-09 Score=100.78 Aligned_cols=109 Identities=14% Similarity=0.196 Sum_probs=76.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh--hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~--~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
|+|+|||||||+|++++++|++++..-. ...++...++.. .+...+ ..+. ...++.++.+|..+...+......
T Consensus 1 MkIlItG~tGfIG~~l~~~L~~~g~~v~-~~~~i~~~d~~~~~~~~~~~-~~~~--~~~~~~~~~~d~~~~~~~~~~~~~ 76 (322)
T d1r6da_ 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDV-PADEVIVLDSLTYAGNRANL-APVD--ADPRLRFVHGDIRDAGLLARELRG 76 (322)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTS-CCSEEEEEECCCTTCCGGGG-GGGT--TCTTEEEEECCTTCHHHHHHHTTT
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCcc-CCceEEEEeCCCccccHhHh-hhhh--cCCCeEEEEeccccchhhhccccc
Confidence 6899999999999999999999873111 113455554321 111111 1121 245788999999999999999999
Q ss_pred cCeeEeccCCCCCC----------------cHHHHHHHHHcCC-cEEecCCc
Q 014694 89 TKLLLNCVGPYRLH----------------GDPVAAACVHSGC-DYLDISGE 123 (420)
Q Consensus 89 ~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~-~yvdisge 123 (420)
.|+|||+|+..... ..+++++|.++++ ++|.+|..
T Consensus 77 ~d~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~ 128 (322)
T d1r6da_ 77 VDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTN 128 (322)
T ss_dssp CCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEG
T ss_pred cceEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecc
Confidence 99999999864321 1678999999987 57776643
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=98.70 E-value=1.1e-08 Score=94.05 Aligned_cols=83 Identities=23% Similarity=0.236 Sum_probs=66.1
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh----
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~---- 87 (420)
.||||||++.||+.+|+.|++.... .++|++.+|++++++++.+... ...++.++.+|++|+++++++++
T Consensus 4 tilITGas~GIG~a~a~~l~~~a~~----g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dvs~~~~v~~~~~~i~~ 77 (248)
T d1snya_ 4 SILITGCNRGLGLGLVKALLNLPQP----PQHLFTTCRNREQAKELEDLAK--NHSNIHILEIDLRNFDAYDKLVADIEG 77 (248)
T ss_dssp EEEESCCSSHHHHHHHHHHHTSSSC----CSEEEEEESCTTSCHHHHHHHH--HCTTEEEEECCTTCGGGHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHHHhC----CCEEEEEECCHHHHHHHHHHHh--cCCcEEEEEEEeccHHHHHHHHhhhHH
Confidence 5999999999999999999864311 1799999999998877654332 23578899999999999888765
Q ss_pred -----ccCeeEeccCCCC
Q 014694 88 -----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (420)
+.|++||+||...
T Consensus 78 ~~~~~~iDiLvnNAg~~~ 95 (248)
T d1snya_ 78 VTKDQGLNVLFNNAGIAP 95 (248)
T ss_dssp HHGGGCCSEEEECCCCCC
T ss_pred HhhcCCcceEEeeccccc
Confidence 3799999999644
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=98.70 E-value=3.2e-08 Score=91.17 Aligned_cols=76 Identities=14% Similarity=0.142 Sum_probs=65.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..+|||||++.||+.+++.|++++ ++|++.+|+++++ ++.++++ ...+.+|++|+++++++++
T Consensus 6 K~alITGas~GIG~aia~~la~~G-------~~V~~~~~~~~~~-~~~~~~~------~~~~~~Dv~~~~~v~~~~~~~~ 71 (248)
T d2d1ya1 6 KGVLVTGGARGIGRAIAQAFAREG-------ALVALCDLRPEGK-EVAEAIG------GAFFQVDLEDERERVRFVEEAA 71 (248)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESSTTHH-HHHHHHT------CEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHH-HHHHHcC------CeEEEEeCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 8999999998876 4556553 4678999999999998876
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
+.|++||+||...
T Consensus 72 ~~~G~iDiLVnnAG~~~ 88 (248)
T d2d1ya1 72 YALGRVDVLVNNAAIAA 88 (248)
T ss_dssp HHHSCCCEEEECCCCCC
T ss_pred HhcCCCCeEEEeCcCCC
Confidence 5799999999653
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.68 E-value=1.8e-08 Score=95.07 Aligned_cols=102 Identities=14% Similarity=0.082 Sum_probs=74.9
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHH-HHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc--
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRV-KQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl-~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~-- 88 (420)
+|+|||||||+|++++++|++++ ++|..++|..+.. ..-++.+. ...++.++.+|+.|.+.+.+.+..
T Consensus 2 ~vLItG~tGfiG~~l~~~Ll~~g-------~~V~~~~r~~~~~~~~~l~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~~ 72 (321)
T d1rpna_ 2 SALVTGITGQDGAYLAKLLLEKG-------YRVHGLVARRSSDTRWRLRELG--IEGDIQYEDGDMADACSVQRAVIKAQ 72 (321)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-------CEEEEEECCCSSCCCHHHHHTT--CGGGEEEEECCTTCHHHHHHHHHHHC
T ss_pred EEEEECCCCHHHHHHHHHHHHCc-------CEEEEEECCCCcccHHHHHHhc--ccCCcEEEEccccChHHhhhhhcccc
Confidence 69999999999999999999988 8999999864321 11223332 234678999999999999998775
Q ss_pred cCeeEeccCCCCCC----------------cHHHHHHHHHcCCc--EEecCC
Q 014694 89 TKLLLNCVGPYRLH----------------GDPVAAACVHSGCD--YLDISG 122 (420)
Q Consensus 89 ~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~~--yvdisg 122 (420)
.++++|+++..... ..+++++|.+++.. ++..|.
T Consensus 73 ~~~~~~~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss 124 (321)
T d1rpna_ 73 PQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQAST 124 (321)
T ss_dssp CSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred ccccccccccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccc
Confidence 56788888754321 16778999988863 555543
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=98.63 E-value=1.9e-08 Score=92.74 Aligned_cols=61 Identities=15% Similarity=0.306 Sum_probs=53.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--c
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--Q 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--~ 88 (420)
|+|+|+|||||+|++++++|.+++ ++|+..+|+. +|+.|.++++++++ +
T Consensus 2 MKIlItGasGfiG~~l~~~L~~~g-------~~Vi~~~r~~----------------------~D~~d~~~~~~~l~~~~ 52 (281)
T d1vl0a_ 2 MKILITGANGQLGREIQKQLKGKN-------VEVIPTDVQD----------------------LDITNVLAVNKFFNEKK 52 (281)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTSS-------EEEEEECTTT----------------------CCTTCHHHHHHHHHHHC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC-------CEEEEeechh----------------------ccCCCHHHHHHHHHHcC
Confidence 789999999999999999999887 8898887742 37889999999987 5
Q ss_pred cCeeEeccCCCC
Q 014694 89 TKLLLNCVGPYR 100 (420)
Q Consensus 89 ~dvVIn~aGp~~ 100 (420)
.|+|||+++...
T Consensus 53 ~d~vih~a~~~~ 64 (281)
T d1vl0a_ 53 PNVVINCAAHTA 64 (281)
T ss_dssp CSEEEECCCCCC
T ss_pred CCEEEeeccccc
Confidence 699999998754
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.60 E-value=4.6e-08 Score=90.44 Aligned_cols=83 Identities=13% Similarity=0.092 Sum_probs=67.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEE-ecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA-GRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~ia-gRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..+||+||++.||+.++++|+++| ++|++. +|+.++++++.+++.. ...++..+.+|++|+++++++++
T Consensus 7 K~alITGas~GIG~aia~~la~~G-------~~Vvi~~~~~~~~~~~~~~~~~~-~g~~~~~~~~D~~~~~~v~~~~~~~ 78 (259)
T d1ja9a_ 7 KVALTTGAGRGIGRGIAIELGRRG-------ASVVVNYGSSSKAAEEVVAELKK-LGAQGVAIQADISKPSEVVALFDKA 78 (259)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT-------CEEEEEESSCHHHHHHHHHHHHH-TTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcC-------CEEEEEcCCChHHHHHHHHHHHH-cCCCceEecCCCCCHHHHHHHHHHH
Confidence 468999999999999999999998 788875 5666667777766642 23467789999999999999877
Q ss_pred -----ccCeeEeccCCCCC
Q 014694 88 -----QTKLLLNCVGPYRL 101 (420)
Q Consensus 88 -----~~dvVIn~aGp~~~ 101 (420)
..|++||++|....
T Consensus 79 ~~~~g~idilinnag~~~~ 97 (259)
T d1ja9a_ 79 VSHFGGLDFVMSNSGMEVW 97 (259)
T ss_dssp HHHHSCEEEEECCCCCCCC
T ss_pred HHHcCCCcEEEeccccccc
Confidence 47999999997543
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=98.55 E-value=7.4e-08 Score=90.56 Aligned_cols=86 Identities=12% Similarity=0.093 Sum_probs=65.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--c
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--Q 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--~ 88 (420)
.+|+|||||||+|++|+++|++++ +.+++.++. . .+|+.|.+.+.++++ +
T Consensus 3 kkIlITG~tGfiG~~l~~~L~~~g-------~~vi~~~~~-~--------------------~~~~~~~~~~~~~~~~~~ 54 (315)
T d1e6ua_ 3 QRVFIAGHRGMVGSAIRRQLEQRG-------DVELVLRTR-D--------------------ELNLLDSRAVHDFFASER 54 (315)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCT-------TEEEECCCT-T--------------------TCCTTCHHHHHHHHHHHC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCc-------CEEEEecCc-h--------------------hccccCHHHHHHHHhhcC
Confidence 489999999999999999999987 555554321 1 147888999998876 4
Q ss_pred cCeeEeccCCCCCC-----------------cHHHHHHHHHcCC-cEEecCCcH
Q 014694 89 TKLLLNCVGPYRLH-----------------GDPVAAACVHSGC-DYLDISGEP 124 (420)
Q Consensus 89 ~dvVIn~aGp~~~~-----------------~~~vv~Ac~~~g~-~yvdisge~ 124 (420)
.|+|||+++..... ..+++++|.+.++ ++|.+|...
T Consensus 55 ~d~v~~~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~ 108 (315)
T d1e6ua_ 55 IDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSC 108 (315)
T ss_dssp CSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGG
T ss_pred CCEEEEcchhccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCce
Confidence 79999999764321 1678889999997 577776543
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.54 E-value=5.2e-08 Score=90.01 Aligned_cols=84 Identities=20% Similarity=0.245 Sum_probs=66.9
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~-~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
.+|||||++.||+.++++|++.... .++|++.+|+.++++++.+++.. ....++..+.+|++|+++++++++
T Consensus 8 valITGas~GIG~aiA~~lA~~~~~----G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~ 83 (259)
T d1oaaa_ 8 VCVLTGASRGFGRALAPQLARLLSP----GSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVR 83 (259)
T ss_dssp EEEESSCSSHHHHHHHHHHHTTBCT----TCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHhcccC----CCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence 5799999999999999999974211 18999999999999998887742 112356789999999999998874
Q ss_pred --------ccCeeEeccCCC
Q 014694 88 --------QTKLLLNCVGPY 99 (420)
Q Consensus 88 --------~~dvVIn~aGp~ 99 (420)
..|++||++|..
T Consensus 84 ~~~~~~~~~~~~lvnnag~~ 103 (259)
T d1oaaa_ 84 ELPRPEGLQRLLLINNAATL 103 (259)
T ss_dssp HSCCCTTCCEEEEEECCCCC
T ss_pred HhhhhccCceEEEEeccccc
Confidence 246899999864
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=98.54 E-value=8.9e-08 Score=88.15 Aligned_cols=80 Identities=15% Similarity=0.118 Sum_probs=63.6
Q ss_pred ceEEEEcCCc--HHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 11 FDVIILGASG--FTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 11 ~~IvV~GATG--~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
..++||||+| .||+.++++|+++| .+|++.+|+++..+...+... ...+...+.+|++|+++++++++
T Consensus 9 K~alITGas~~~GIG~aiA~~la~~G-------a~V~i~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~v~~~~~~ 79 (256)
T d1ulua_ 9 KKALVMGVTNQRSLGFAIAAKLKEAG-------AEVALSYQAERLRPEAEKLAE--ALGGALLFRADVTQDEELDALFAG 79 (256)
T ss_dssp CEEEEESCCCSSSHHHHHHHHHHHTT-------CEEEEEESSGGGHHHHHHHHH--HTTCCEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEECCCCCchHHHHHHHHHHHCC-------CEEEEEeCcHHHHHHHHHhhh--ccCcccccccccCCHHHHHHHHHH
Confidence 4699999998 79999999999998 899999998765544332221 12356789999999999999876
Q ss_pred ------ccCeeEeccCCC
Q 014694 88 ------QTKLLLNCVGPY 99 (420)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (420)
+.|++||++|..
T Consensus 80 ~~~~~g~iDilVnnag~~ 97 (256)
T d1ulua_ 80 VKEAFGGLDYLVHAIAFA 97 (256)
T ss_dssp HHHHHSSEEEEEECCCCC
T ss_pred HHHhcCCceEEEeccccc
Confidence 479999999864
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.53 E-value=1.6e-07 Score=87.17 Aligned_cols=83 Identities=13% Similarity=0.109 Sum_probs=67.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+|||+.||+.+|+.|+++| .+|++.+|++++++++.+++..........+.+|+++.+.+...+.
T Consensus 15 K~alITGassGIG~aiA~~la~~G-------~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 87 (269)
T d1xu9a_ 15 KKVIVTGASKGIGREMAYHLAKMG-------AHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAG 87 (269)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHH
Confidence 469999999999999999999998 8999999999999988776531123456678889998887777654
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
..|++||++|...
T Consensus 88 ~~~g~~~~li~nag~~~ 104 (269)
T d1xu9a_ 88 KLMGGLDMLILNHITNT 104 (269)
T ss_dssp HHHTSCSEEEECCCCCC
T ss_pred HHhCCcccccccccccc
Confidence 5789999998654
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.53 E-value=1e-07 Score=88.70 Aligned_cols=84 Identities=10% Similarity=0.040 Sum_probs=68.5
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC-hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs-~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
...++|+||++.||+.+++.|+++| .+|++.+|+ .+.++++.+++.. ...++.++.+|++|++++.++++
T Consensus 18 gK~~lITGas~GIG~aia~~la~~G-------a~Vvi~~~~~~~~~~~~~~~~~~-~g~~~~~~~~D~~~~~~v~~~~~~ 89 (272)
T d1g0oa_ 18 GKVALVTGAGRGIGREMAMELGRRG-------CKVIVNYANSTESAEEVVAAIKK-NGSDAACVKANVGVVEDIVRMFEE 89 (272)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTT-------CEEEEEESSCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcC-------CEEEEEeCCchHHHHHHHHHHHh-hCCceeeEeCCCCCHHHHHHHHHH
Confidence 3479999999999999999999998 899998876 5666766665532 23567889999999999999876
Q ss_pred ------ccCeeEeccCCCCC
Q 014694 88 ------QTKLLLNCVGPYRL 101 (420)
Q Consensus 88 ------~~dvVIn~aGp~~~ 101 (420)
+.|++||++|....
T Consensus 90 ~~~~~g~idilV~nag~~~~ 109 (272)
T d1g0oa_ 90 AVKIFGKLDIVCSNSGVVSF 109 (272)
T ss_dssp HHHHHSCCCEEEECCCCCCC
T ss_pred HHHHhCCCCccccccccchh
Confidence 46999999996543
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.53 E-value=3.7e-08 Score=87.69 Aligned_cols=93 Identities=19% Similarity=0.264 Sum_probs=61.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH-hcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC-SQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~-~~~ 89 (420)
.+|+|+|||||+|++++++|++++. ..+|.+..|+... ....+..+..|..++.+.+ ..+
T Consensus 3 KkIlItGatG~iG~~lv~~L~~~~~-----~~~v~~~~r~~~~--------------~~~~~~~~~~d~~~~~~~~~~~~ 63 (212)
T d2a35a1 3 KRVLLAGATGLTGEHLLDRILSEPT-----LAKVIAPARKALA--------------EHPRLDNPVGPLAELLPQLDGSI 63 (212)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHCTT-----CCEEECCBSSCCC--------------CCTTEECCBSCHHHHGGGCCSCC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCC-----eEEEEEEeCCchh--------------hcccccccccchhhhhhccccch
Confidence 4899999999999999999999872 1367666665321 1122344455555444443 357
Q ss_pred CeeEeccCCCCCC--------------cHHHHHHHHHcCC-cEEecCC
Q 014694 90 KLLLNCVGPYRLH--------------GDPVAAACVHSGC-DYLDISG 122 (420)
Q Consensus 90 dvVIn~aGp~~~~--------------~~~vv~Ac~~~g~-~yvdisg 122 (420)
|+||||+|..... ..+++++|.++++ +++.+|+
T Consensus 64 d~vi~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss 111 (212)
T d2a35a1 64 DTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSA 111 (212)
T ss_dssp SEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECC
T ss_pred heeeeeeeeeccccccccccccchhhhhhhcccccccccccccccccc
Confidence 9999999865311 2667788888887 4666653
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.52 E-value=6.6e-08 Score=88.40 Aligned_cols=71 Identities=15% Similarity=0.157 Sum_probs=61.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..+||+||++.||+.+++.|+++| .+|++.+|+.+++ .++..+++|++|+++++++++
T Consensus 8 K~~lITGas~GIG~aia~~la~~G-------a~V~~~~r~~~~~------------~~~~~~~~Dv~~~~~v~~~~~~~~ 68 (237)
T d1uzma1 8 RSVLVTGGNRGIGLAIAQRLAADG-------HKVAVTHRGSGAP------------KGLFGVEVDVTDSDAVDRAFTAVE 68 (237)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT-------CEEEEEESSSCCC------------TTSEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECCcchh------------cCceEEEEecCCHHHHHHHHHHHH
Confidence 479999999999999999999998 8999999987654 345678999999999998876
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
..|++||+||...
T Consensus 69 ~~~g~iDiLVnnAG~~~ 85 (237)
T d1uzma1 69 EHQGPVEVLVSNAGLSA 85 (237)
T ss_dssp HHHSSCSEEEEECSCCC
T ss_pred HhcCCceEEEeeecccc
Confidence 4799999999643
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=98.49 E-value=1.9e-07 Score=85.91 Aligned_cols=84 Identities=15% Similarity=0.141 Sum_probs=66.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh---hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP---TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~---~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
-.+||+||+|.||+.++++|++++. -+|++++|+. +.++++.+++.. ...++.++.+|++|+++++++++
T Consensus 10 gt~lVTGgs~GIG~a~a~~la~~Ga------~~vvl~~R~~~~~~~~~~~~~~l~~-~g~~v~~~~~Dv~d~~~~~~~~~ 82 (259)
T d2fr1a1 10 GTVLVTGGTGGVGGQIARWLARRGA------PHLLLVSRSGPDADGAGELVAELEA-LGARTTVAACDVTDRESVRELLG 82 (259)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHTC------SEEEEEESSGGGSTTHHHHHHHHHH-TTCEEEEEECCTTCHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC------CEEEEEeCCccCHHHHHHHHHHHHh-ccccccccccccchHHHHHHhhc
Confidence 3799999999999999999999982 2688899974 345555555431 23567889999999999999987
Q ss_pred c------cCeeEeccCCCCC
Q 014694 88 Q------TKLLLNCVGPYRL 101 (420)
Q Consensus 88 ~------~dvVIn~aGp~~~ 101 (420)
. .|.|||++|....
T Consensus 83 ~i~~~~~i~~vv~~ag~~~~ 102 (259)
T d2fr1a1 83 GIGDDVPLSAVFHAAATLDD 102 (259)
T ss_dssp TSCTTSCEEEEEECCCCCCC
T ss_pred cccccccccccccccccccc
Confidence 4 5789999997653
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.48 E-value=5.8e-07 Score=84.95 Aligned_cols=80 Identities=13% Similarity=0.057 Sum_probs=64.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEec---------ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR---------NPTRVKQALQWASPSHSLSIPILTADTTDPPS 81 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagR---------s~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~s 81 (420)
..+|||||++.||+.+++.|+++| .+|++.+| +.++++++.+++. .......+|+.|.++
T Consensus 8 KvalITGas~GIG~aiA~~la~~G-------a~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~d~~~~~~ 76 (302)
T d1gz6a_ 8 RVVLVTGAGGGLGRAYALAFAERG-------ALVVVNDLGGDFKGVGKGSSAADKVVEEIR----RRGGKAVANYDSVEA 76 (302)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT-------CEEEEECCCBCTTSCBCCSHHHHHHHHHHH----HTTCEEEEECCCGGG
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcC-------CEEEEEeCCchhhhhhhhHHHHHHHHHHHh----hcccccccccchHHH
Confidence 369999999999999999999998 89999865 4566777777664 244567889999888
Q ss_pred HHHHHh-------ccCeeEeccCCCCC
Q 014694 82 LHRLCS-------QTKLLLNCVGPYRL 101 (420)
Q Consensus 82 l~~~~~-------~~dvVIn~aGp~~~ 101 (420)
++++++ +.|++||+||....
T Consensus 77 ~~~~v~~~~~~~G~iDiLVnNAGi~~~ 103 (302)
T d1gz6a_ 77 GEKLVKTALDTFGRIDVVVNNAGILRD 103 (302)
T ss_dssp HHHHHHHHHHHTSCCCEEEECCCCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCccCCC
Confidence 877765 57999999997543
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=98.45 E-value=1.6e-07 Score=86.72 Aligned_cols=84 Identities=19% Similarity=0.111 Sum_probs=63.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCC-CHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTT-DPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~-d~~sl~~~~~-- 87 (420)
..|+|+||++.||+.+++.|++++ .++++.+|+.++++++.+........++.++.+|++ +.+++++++.
T Consensus 6 K~vlITGgs~GIG~~~A~~la~~G-------~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 78 (254)
T d1sbya1 6 KNVIFVAALGGIGLDTSRELVKRN-------LKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKI 78 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTC-------CSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHH
T ss_pred CEEEEecCCCHHHHHHHHHHHHCC-------CEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHH
Confidence 469999999999999999999998 788888887766554433111112346778899997 5566777654
Q ss_pred -----ccCeeEeccCCCCC
Q 014694 88 -----QTKLLLNCVGPYRL 101 (420)
Q Consensus 88 -----~~dvVIn~aGp~~~ 101 (420)
+.|++||+||....
T Consensus 79 ~~~~g~iDilvnnAG~~~~ 97 (254)
T d1sbya1 79 FDQLKTVDILINGAGILDD 97 (254)
T ss_dssp HHHHSCCCEEEECCCCCCT
T ss_pred HHHcCCCCEEEeCCCCCCH
Confidence 57999999997654
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=98.43 E-value=2.6e-07 Score=84.04 Aligned_cols=72 Identities=18% Similarity=0.167 Sum_probs=59.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCH-HHHHHHHhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDP-PSLHRLCSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~-~sl~~~~~~~ 89 (420)
..+|||||++.||+.++++|+++| .+|++.+|+++++++ . ...++.+|+++. +.+.+-+.+.
T Consensus 5 K~~lVTGas~GIG~aia~~l~~~G-------a~V~~~~r~~~~l~~----~------~~~~~~~Dv~~~~~~~~~~~g~i 67 (234)
T d1o5ia_ 5 KGVLVLAASRGIGRAVADVLSQEG-------AEVTICARNEELLKR----S------GHRYVVCDLRKDLDLLFEKVKEV 67 (234)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHH----T------CSEEEECCTTTCHHHHHHHSCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEECCHHHHHh----c------CCcEEEcchHHHHHHHHHHhCCC
Confidence 479999999999999999999998 899999999887743 2 246788999763 4555556689
Q ss_pred CeeEeccCCC
Q 014694 90 KLLLNCVGPY 99 (420)
Q Consensus 90 dvVIn~aGp~ 99 (420)
|++||+||..
T Consensus 68 D~lVnnAG~~ 77 (234)
T d1o5ia_ 68 DILVLNAGGP 77 (234)
T ss_dssp SEEEECCCCC
T ss_pred cEEEeccccc
Confidence 9999999954
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.38 E-value=2.6e-07 Score=84.67 Aligned_cols=78 Identities=13% Similarity=0.139 Sum_probs=65.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..+||+||++.||+.+++.|+++| ++|++.+|++++++++.+. ..+....+|+.+.+.++....
T Consensus 7 K~alITGas~GIG~aia~~la~~G-------~~Vi~~~r~~~~l~~~~~~------~~~~~~~~d~~~~~~~~~~~~~~~ 73 (245)
T d2ag5a1 7 KVIILTAAAQGIGQAAALAFAREG-------AKVIATDINESKLQELEKY------PGIQTRVLDVTKKKQIDQFANEVE 73 (245)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHGGGGGS------TTEEEEECCTTCHHHHHHHHHHCS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHhc------cCCceeeeeccccccccccccccc
Confidence 469999999999999999999998 8999999999998766543 346788889998887777655
Q ss_pred ccCeeEeccCCCCC
Q 014694 88 QTKLLLNCVGPYRL 101 (420)
Q Consensus 88 ~~dvVIn~aGp~~~ 101 (420)
+.|++||++|....
T Consensus 74 ~id~lVn~ag~~~~ 87 (245)
T d2ag5a1 74 RLDVLFNVAGFVHH 87 (245)
T ss_dssp CCSEEEECCCCCCC
T ss_pred cceeEEecccccCC
Confidence 67999999996543
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.27 E-value=3.4e-07 Score=84.19 Aligned_cols=74 Identities=11% Similarity=0.000 Sum_probs=58.6
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh----
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~---- 87 (420)
.+|||||++.||+.+++.|+++| .+|++.+|+.++++++..... .+..+|+.|+++++++++
T Consensus 2 TAlVTGas~GiG~aiA~~la~~G-------a~V~i~~r~~~~~~~~~~~~~-------~~~~~dv~~~~~~~~~~~~~~~ 67 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAG-------HTVACHDESFKQKDELEAFAE-------TYPQLKPMSEQEPAELIEAVTS 67 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTT-------CEEEECCGGGGSHHHHHHHHH-------HCTTSEECCCCSHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHhhhC-------cEEEeccCCHHHHHHHHHHHHH
Confidence 47999999999999999999998 899999999888876644321 223467777777766654
Q ss_pred ---ccCeeEeccCCC
Q 014694 88 ---QTKLLLNCVGPY 99 (420)
Q Consensus 88 ---~~dvVIn~aGp~ 99 (420)
+.|++||+||..
T Consensus 68 ~~G~iDiLVnNAg~~ 82 (252)
T d1zmta1 68 AYGQVDVLVSNDIFA 82 (252)
T ss_dssp HHSCCCEEEEECCCC
T ss_pred HcCCCCEEEECCcCC
Confidence 579999999853
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=98.25 E-value=1.1e-06 Score=81.18 Aligned_cols=82 Identities=12% Similarity=0.070 Sum_probs=63.0
Q ss_pred cceEEEEcCCc--HHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh
Q 014694 10 LFDVIILGASG--FTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 10 ~~~IvV~GATG--~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
...+||+||+| .||+.+|+.|+++| .+|++++|+++..+. ++++.. ......++.+|+++++++.+++.
T Consensus 5 gK~alITGaag~~GIG~AiA~~la~~G-------a~V~i~~r~~~~~~~-~~~l~~-~~~~~~~~~~d~~~~~~~~~~~~ 75 (274)
T d2pd4a1 5 GKKGLIVGVANNKSIAYGIAQSCFNQG-------ATLAFTYLNESLEKR-VRPIAQ-ELNSPYVYELDVSKEEHFKSLYN 75 (274)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHTTT-------CEEEEEESSTTTHHH-HHHHHH-HTTCCCEEECCTTCHHHHHHHHH
T ss_pred CCEEEEECCCCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHH-HHHHHh-hCCceeEeeecccchhhHHHHHH
Confidence 34799999987 79999999999998 899999998643322 222211 12456788999999999888875
Q ss_pred -------ccCeeEeccCCCC
Q 014694 88 -------QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -------~~dvVIn~aGp~~ 100 (420)
..|++||++|.+.
T Consensus 76 ~~~~~~g~id~lV~nag~~~ 95 (274)
T d2pd4a1 76 SVKKDLGSLDFIVHSVAFAP 95 (274)
T ss_dssp HHHHHTSCEEEEEECCCCCC
T ss_pred HHHHHcCCCCeEEeeccccc
Confidence 5799999999654
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=98.23 E-value=1.7e-06 Score=79.32 Aligned_cols=79 Identities=18% Similarity=0.178 Sum_probs=62.6
Q ss_pred cceEEEEcCCc--HHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHH-HHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 014694 10 LFDVIILGASG--FTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQ-ALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 10 ~~~IvV~GATG--~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~-~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
...+||+||+| .||+.+++.|+++| .+|++.+|+.+++.+ +.+++ ..+...+++|+.|++++++++
T Consensus 6 gK~~lItGaag~~GIG~aiA~~la~~G-------a~Vil~~~~~~~~~~~~~~~~----~~~~~~~~~dv~~~~~~~~~~ 74 (268)
T d2h7ma1 6 GKRILVSGIITDSSIAFHIARVAQEQG-------AQLVLTGFDRLRLIQRITDRL----PAKAPLLELDVQNEEHLASLA 74 (268)
T ss_dssp TCEEEECCCSSTTCHHHHHHHHHHHTT-------CEEEEEECSCHHHHHHHHTTS----SSCCCEEECCTTCHHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHcC-------CEEEEEeCChHHHHHHHHHHc----CCceeeEeeeccccccccccc
Confidence 34799999765 59999999999998 899999999887744 44433 356788999999998777765
Q ss_pred h----------ccCeeEeccCCC
Q 014694 87 S----------QTKLLLNCVGPY 99 (420)
Q Consensus 87 ~----------~~dvVIn~aGp~ 99 (420)
+ ..|++||++|..
T Consensus 75 ~~v~~~~~~~~~ld~~i~~ag~~ 97 (268)
T d2h7ma1 75 GRVTEAIGAGNKLDGVVHSIGFM 97 (268)
T ss_dssp HHHHHHHCTTCCEEEEEECCCCC
T ss_pred chhhhccccCCCcceeeeccccc
Confidence 4 258999999954
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.22 E-value=1.4e-06 Score=81.38 Aligned_cols=85 Identities=18% Similarity=0.037 Sum_probs=63.9
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhH---HHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR---VKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~k---l~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
-||||||++.||+.+++.|++++.. .+.+.+..|+.++ +++..+++.. ...++..+.+|++|++++.++++.
T Consensus 4 VvlITGassGIG~a~A~~la~~Ga~----v~~v~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~Dv~~~~~~~~~~~~ 78 (285)
T d1jtva_ 4 VVLITGCSSGIGLHLAVRLASDPSQ----SFKVYATLRDLKTQGRLWEAARALAC-PPGSLETLQLDVRDSKSVAAARER 78 (285)
T ss_dssp EEEESCCSSHHHHHHHHHHHTCTTC----CEEEEEEESCGGGTHHHHHHHHHTTC-CTTSEEEEECCTTCHHHHHHHHHT
T ss_pred EEEEccCCCHHHHHHHHHHHHCCCC----eEEEEEecCChhhhHHHHHHHHHHhc-cCCceEEEeccccchHhhhhhhhh
Confidence 4788999999999999999998721 1456666776554 4444455532 345678899999999999999864
Q ss_pred -----cCeeEeccCCCCC
Q 014694 89 -----TKLLLNCVGPYRL 101 (420)
Q Consensus 89 -----~dvVIn~aGp~~~ 101 (420)
.|++||++|....
T Consensus 79 ~~~g~idilvnnag~~~~ 96 (285)
T d1jtva_ 79 VTEGRVDVLVCNAGLGLL 96 (285)
T ss_dssp CTTSCCSEEEECCCCCCC
T ss_pred ccccchhhhhhccccccc
Confidence 6899999996543
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=98.19 E-value=9.9e-07 Score=81.65 Aligned_cols=81 Identities=12% Similarity=0.039 Sum_probs=58.8
Q ss_pred EEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEec-ChhHHHHHHHHhCCCCCC-----------------CccEEEE
Q 014694 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-NPTRVKQALQWASPSHSL-----------------SIPILTA 74 (420)
Q Consensus 13 IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagR-s~~kl~~~~~~l~~~~~~-----------------~~~~i~~ 74 (420)
+|||||++.||+.+++.|+++| .+|++.+| +.++++++.+++...... ......+
T Consensus 5 AlITGas~GIG~aiA~~la~~G-------a~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 77 (284)
T d1e7wa_ 5 ALVTGAAKRLGRSIAEGLHAEG-------YAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSA 77 (284)
T ss_dssp EEETTCSSHHHHHHHHHHHHTT-------CEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CC
T ss_pred EEEeCCCCHHHHHHHHHHHHcC-------CEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccc
Confidence 6899999999999999999998 89988766 556666666655210011 1223456
Q ss_pred eCCCHHHHHHHHh-------ccCeeEeccCCCC
Q 014694 75 DTTDPPSLHRLCS-------QTKLLLNCVGPYR 100 (420)
Q Consensus 75 D~~d~~sl~~~~~-------~~dvVIn~aGp~~ 100 (420)
|+++.++++++++ +.|++||++|...
T Consensus 78 dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~ 110 (284)
T d1e7wa_ 78 PVTLFTRCAELVAACYTHWGRCDVLVNNASSFY 110 (284)
T ss_dssp CBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred cCCCHHHHHHHHHHHHHHhCCCCEEEecCCccC
Confidence 7889998988875 5799999999754
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.18 E-value=3.5e-06 Score=69.25 Aligned_cols=73 Identities=16% Similarity=0.209 Sum_probs=64.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-Hhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~-~~~~ 89 (420)
|+|+|+|+ |.+|+.+++.|.+.+ ++|.+.++++++++++.+++ +..++.+|.+|++.++++ ++++
T Consensus 1 M~IvI~G~-G~~G~~la~~L~~~g-------~~v~vid~d~~~~~~~~~~~------~~~vi~Gd~~~~~~l~~~~i~~a 66 (132)
T d1lssa_ 1 MYIIIAGI-GRVGYTLAKSLSEKG-------HDIVLIDIDKDICKKASAEI------DALVINGDCTKIKTLEDAGIEDA 66 (132)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHC------SSEEEESCTTSHHHHHHTTTTTC
T ss_pred CEEEEECC-CHHHHHHHHHHHHCC-------CCcceecCChhhhhhhhhhh------hhhhccCcccchhhhhhcChhhh
Confidence 68999998 999999999999987 79999999999998877654 367899999999999998 6889
Q ss_pred CeeEeccC
Q 014694 90 KLLLNCVG 97 (420)
Q Consensus 90 dvVIn~aG 97 (420)
|.++.+..
T Consensus 67 ~~vv~~t~ 74 (132)
T d1lssa_ 67 DMYIAVTG 74 (132)
T ss_dssp SEEEECCS
T ss_pred hhhcccCC
Confidence 99887654
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=98.11 E-value=1.9e-06 Score=78.83 Aligned_cols=82 Identities=11% Similarity=0.099 Sum_probs=58.0
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhH-HHHHHHHhCCCCCCCccEEEEeCCC----HHHHHHHH
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR-VKQALQWASPSHSLSIPILTADTTD----PPSLHRLC 86 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~k-l~~~~~~l~~~~~~~~~~i~~D~~d----~~sl~~~~ 86 (420)
..|||||++.||+.+++.|+++| .+|++.+|+.++ .+++.+++......+...+..|..+ .+.+.+++
T Consensus 3 vAlVTGas~GIG~aia~~la~~G-------~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (266)
T d1mxha_ 3 AAVITGGARRIGHSIAVRLHQQG-------FRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDII 75 (266)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTT-------CEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHH
Confidence 36999999999999999999998 899999998654 4555555532112344455555543 34444443
Q ss_pred h-------ccCeeEeccCCCC
Q 014694 87 S-------QTKLLLNCVGPYR 100 (420)
Q Consensus 87 ~-------~~dvVIn~aGp~~ 100 (420)
+ +.|++||+||...
T Consensus 76 ~~~~~~~g~iDilvnnAG~~~ 96 (266)
T d1mxha_ 76 DCSFRAFGRCDVLVNNASAYY 96 (266)
T ss_dssp HHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHhCCCCEEEECCccCC
Confidence 3 5899999999654
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.11 E-value=6e-06 Score=74.99 Aligned_cols=78 Identities=14% Similarity=0.095 Sum_probs=64.9
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
...+|||||++.||+.++++|+++| ++|++.+|+.++++++.++++ .+.....+|+.+.+.+++...
T Consensus 5 GKvalITGas~GIG~aia~~la~~G-------~~V~~~~r~~~~~~~~~~~l~----~~~~~~~~~~~~~~~~~~~~~~~ 73 (248)
T d2o23a1 5 GLVAVITGGASGLGLATAERLVGQG-------ASAVLLDLPNSGGEAQAKKLG----NNCVFAPADVTSEKDVQTALALA 73 (248)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEECTTSSHHHHHHHHC----TTEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEeCChHHHHHHHHHhC----CCccccccccccccccccccccc
Confidence 3568999999999999999999998 899999999999999999885 466778889999887776654
Q ss_pred -----ccCeeEeccCC
Q 014694 88 -----QTKLLLNCVGP 98 (420)
Q Consensus 88 -----~~dvVIn~aGp 98 (420)
..|.++++++.
T Consensus 74 ~~~~~~~~~~~~~~~~ 89 (248)
T d2o23a1 74 KGKFGRVDVAVNCAGI 89 (248)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred cccccccccccccccc
Confidence 35777766653
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=98.00 E-value=2.2e-06 Score=77.51 Aligned_cols=71 Identities=14% Similarity=0.085 Sum_probs=50.1
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH-----
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC----- 86 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~----- 86 (420)
+|+|+||++.||+.+++.|++++ ++|++++|++++.. .....+.+|+.+.+......
T Consensus 4 kVlITGas~GIG~aia~~l~~~G-------~~V~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~ 65 (235)
T d1ooea_ 4 KVIVYGGKGALGSAILEFFKKNG-------YTVLNIDLSANDQA-----------DSNILVDGNKNWTEQEQSILEQTAS 65 (235)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-------EEEEEEESSCCTTS-----------SEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCC-------CEEEEEECCchhcc-----------cccceeccccCchhHHHHHHHHHHH
Confidence 69999999999999999999998 89999999875421 11122334554443333222
Q ss_pred ----hccCeeEeccCCCC
Q 014694 87 ----SQTKLLLNCVGPYR 100 (420)
Q Consensus 87 ----~~~dvVIn~aGp~~ 100 (420)
.+.|+|||+||.+.
T Consensus 66 ~~~~g~iD~linnAG~~~ 83 (235)
T d1ooea_ 66 SLQGSQVDGVFCVAGGWA 83 (235)
T ss_dssp HHTTCCEEEEEECCCCCC
T ss_pred HhcCCCeeEEEECCcccc
Confidence 24799999999643
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=97.99 E-value=3.5e-05 Score=65.47 Aligned_cols=93 Identities=14% Similarity=0.109 Sum_probs=69.0
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
..+|+|+|+ |-+|+.++++|...+. .++.++.|+.++.+++.++++. . ..+-+++.+.+.++
T Consensus 24 ~~~ilviGa-G~~g~~v~~~L~~~g~------~~i~v~nRt~~ka~~l~~~~~~------~-----~~~~~~~~~~l~~~ 85 (159)
T d1gpja2 24 DKTVLVVGA-GEMGKTVAKSLVDRGV------RAVLVANRTYERAVELARDLGG------E-----AVRFDELVDHLARS 85 (159)
T ss_dssp TCEEEEESC-CHHHHHHHHHHHHHCC------SEEEEECSSHHHHHHHHHHHTC------E-----ECCGGGHHHHHHTC
T ss_pred cCeEEEECC-CHHHHHHHHHHHhcCC------cEEEEEcCcHHHHHHHHHhhhc------c-----cccchhHHHHhccC
Confidence 457999998 9999999999999872 4799999999999999887741 1 12346788899999
Q ss_pred CeeEeccCCC-CCCcHHHHHHHHH-cC----CcEEec
Q 014694 90 KLLLNCVGPY-RLHGDPVAAACVH-SG----CDYLDI 120 (420)
Q Consensus 90 dvVIn~aGp~-~~~~~~vv~Ac~~-~g----~~yvdi 120 (420)
|+||+|.+-. .......++...+ .. .-+||+
T Consensus 86 Divi~atss~~~ii~~~~i~~~~~~r~~~~~~~iiDl 122 (159)
T d1gpja2 86 DVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDI 122 (159)
T ss_dssp SEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEEC
T ss_pred CEEEEecCCCCccccHhhhHHHHHhcccCCCeEEEee
Confidence 9999999843 3344555544433 22 137887
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=97.94 E-value=9.5e-06 Score=73.87 Aligned_cols=81 Identities=12% Similarity=0.124 Sum_probs=62.6
Q ss_pred ceEEEEcCCc--HHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 11 FDVIILGASG--FTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 11 ~~IvV~GATG--~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
..+|||||+| .+|+.+++.|+++| .+|++.+|+++.++.+.+... .......+..|+.+..++.+.+.
T Consensus 6 K~~lITGass~~GIG~aiA~~l~~~G-------~~V~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 76 (258)
T d1qsga_ 6 KRILVTGVASKLSIAYGIAQAMHREG-------AELAFTYQNDKLKGRVEEFAA--QLGSDIVLQCDVAEDASIDTMFAE 76 (258)
T ss_dssp CEEEECCCCSTTSHHHHHHHHHHHTT-------CEEEEEESSTTTHHHHHHHHH--HTTCCCEEECCTTCHHHHHHHHHH
T ss_pred CEEEEECCCCchhHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHHh--hcCCcceeecccchHHHHHHHHHH
Confidence 4799999998 79999999999998 899999999765544433222 12356778889999888888765
Q ss_pred ------ccCeeEeccCCCC
Q 014694 88 ------QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (420)
..|++||+++...
T Consensus 77 ~~~~~~~~d~~v~~a~~~~ 95 (258)
T d1qsga_ 77 LGKVWPKFDGFVHSIGFAP 95 (258)
T ss_dssp HHTTCSSEEEEEECCCCCC
T ss_pred hhhcccccceEEEeecccc
Confidence 3589999998643
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=97.85 E-value=5.4e-06 Score=76.24 Aligned_cols=92 Identities=15% Similarity=0.241 Sum_probs=56.7
Q ss_pred EEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEec--ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHH-HHHHH---
Q 014694 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR--NPTRVKQALQWASPSHSLSIPILTADTTDPPS-LHRLC--- 86 (420)
Q Consensus 13 IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagR--s~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~s-l~~~~--- 86 (420)
|+|||||||+|++++++|++++. .+|++.++ +..+...+.+ . . .+|..+.+. .....
T Consensus 2 ILITGgsGfIGs~lv~~L~~~g~------~~V~~~d~~~~~~~~~~~~~-~------~----~~~~~~~~~~~~~~~~~~ 64 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDKGI------TDILVVDNLKDGTKFVNLVD-L------N----IADYMDKEDFLIQIMAGE 64 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTC------CCEEEEECCSSGGGGHHHHT-S------C----CSEEEEHHHHHHHHHTTC
T ss_pred EEEecCccHHHHHHHHHHHhCCC------CeEEEEECCCCcchhhcccc-c------c----hhhhccchHHHHHHhhhh
Confidence 89999999999999999999872 36777653 2222222211 1 1 122222222 33332
Q ss_pred --hccCeeEeccCCCCCC--------------cHHHHHHHHHcCCcEEecC
Q 014694 87 --SQTKLLLNCVGPYRLH--------------GDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 87 --~~~dvVIn~aGp~~~~--------------~~~vv~Ac~~~g~~yvdis 121 (420)
..+++|+|+++..... ...++++|...+++++..|
T Consensus 65 ~~~~~~~i~~~aa~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~v~~s 115 (307)
T d1eq2a_ 65 EFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYAS 115 (307)
T ss_dssp CCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEE
T ss_pred cccchhhhhhhcccccccccccccccccccccccccccccccccccccccc
Confidence 3578899998754322 1567788888888766554
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=97.81 E-value=0.00012 Score=61.26 Aligned_cols=82 Identities=13% Similarity=0.156 Sum_probs=56.0
Q ss_pred CCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC--CCCCCccEEEEeCCCHHHHHH
Q 014694 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--SHSLSIPILTADTTDPPSLHR 84 (420)
Q Consensus 7 ~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~--~~~~~~~~i~~D~~d~~sl~~ 84 (420)
|.++++|.|+|+ |++|..++..|+..+-. .++.+.++++++.+....++.. .......+...| .+
T Consensus 2 m~~~~KI~IIGa-G~VG~~~A~~l~~~~~~-----~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d---~~---- 68 (146)
T d1ez4a1 2 MPNHQKVVLVGD-GAVGSSYAFAMAQQGIA-----EEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGE---YS---- 68 (146)
T ss_dssp BTTBCEEEEECC-SHHHHHHHHHHHHHTCC-----SEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECC---GG----
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhcCCC-----cEEEEeecccchhHHHHHHHhccccccCCceEeecc---HH----
Confidence 455779999996 99999999999998721 4899999999887765555432 111222333333 33
Q ss_pred HHhccCeeEeccCCCCC
Q 014694 85 LCSQTKLLLNCVGPYRL 101 (420)
Q Consensus 85 ~~~~~dvVIn~aGp~~~ 101 (420)
.++++|+||.++|.-..
T Consensus 69 ~~~~adivvitag~~~~ 85 (146)
T d1ez4a1 69 DCKDADLVVITAGAPQK 85 (146)
T ss_dssp GGTTCSEEEECCCC---
T ss_pred HhccccEEEEecccccC
Confidence 36789999999996443
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.78 E-value=9.9e-06 Score=73.20 Aligned_cols=71 Identities=13% Similarity=0.100 Sum_probs=50.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
.+|||+||++.||+.+++.|++++ ++|++++|++.+. ......+.+|..+.+..+.+..
T Consensus 3 K~vlITGas~GIG~a~a~~l~~~G-------~~V~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~ 64 (236)
T d1dhra_ 3 RRVLVYGGRGALGSRCVQAFRARN-------WWVASIDVVENEE-----------ASASVIVKMTDSFTEQADQVTAEVG 64 (236)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT-------CEEEEEESSCCTT-----------SSEEEECCCCSCHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEeCCcccc-----------ccccceeecccCcHHHHHHHHHHHH
Confidence 479999999999999999999998 8999999876442 1112233445554444443322
Q ss_pred ------ccCeeEeccCCC
Q 014694 88 ------QTKLLLNCVGPY 99 (420)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (420)
+.|++||+||.+
T Consensus 65 ~~~~~~~iD~lInnAG~~ 82 (236)
T d1dhra_ 65 KLLGDQKVDAILCVAGGW 82 (236)
T ss_dssp HHHTTCCEEEEEECCCCC
T ss_pred HHhCCCCceEEEECCccc
Confidence 379999999954
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=97.76 E-value=5.8e-05 Score=65.32 Aligned_cols=80 Identities=15% Similarity=0.102 Sum_probs=61.4
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHH---HHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQ---ALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~---~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
..+|+|+|+ |.+|+.++..|.+.+. .++.++.|+.+++++ +.+++.. .........|+.+.+.+....
T Consensus 18 ~k~vlIlGa-GGaarai~~al~~~g~------~~i~i~nR~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 88 (182)
T d1vi2a1 18 GKTMVLLGA-GGASTAIGAQGAIEGL------KEIKLFNRRDEFFDKALAFAQRVNE--NTDCVVTVTDLADQQAFAEAL 88 (182)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTC------SEEEEEECSSTTHHHHHHHHHHHHH--HSSCEEEEEETTCHHHHHHHH
T ss_pred CCEEEEECC-cHHHHHHHHHHhhcCC------ceEeeeccchHHHHHHHHHHHHHHh--hcCcceEeeecccccchhhhh
Confidence 358999998 7899999999999873 589999998765554 3334421 123445678999999999999
Q ss_pred hccCeeEeccCC
Q 014694 87 SQTKLLLNCVGP 98 (420)
Q Consensus 87 ~~~dvVIn~aGp 98 (420)
..+|+||||...
T Consensus 89 ~~~diiIN~Tp~ 100 (182)
T d1vi2a1 89 ASADILTNGTKV 100 (182)
T ss_dssp HTCSEEEECSST
T ss_pred cccceeccccCC
Confidence 999999999753
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.71 E-value=1.1e-05 Score=67.50 Aligned_cols=99 Identities=18% Similarity=0.182 Sum_probs=62.1
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
++|+|-|+|||||+|+.+++-|.++.-+ ..++..+..+.+.-+. +. ...-....-++.+ ..+.+
T Consensus 1 q~mnVaIvGATGyvG~eli~lL~~~~hP----~~~l~~~~s~~~~Gk~----i~---~~~~~~~~~~~~~-----~~~~~ 64 (144)
T d2hjsa1 1 QPLNVAVVGATGSVGEALVGLLDERDFP----LHRLHLLASAESAGQR----MG---FAESSLRVGDVDS-----FDFSS 64 (144)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCC----CSCEEEEECTTTTTCE----EE---ETTEEEECEEGGG-----CCGGG
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCCC----ceEEEEEeecccCCcc----ee---eccccchhccchh-----hhhcc
Confidence 4689999999999999999999865411 2556555443322111 10 0011122222211 22567
Q ss_pred cCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHH
Q 014694 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPE 125 (420)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~ 125 (420)
+|+++.+++. .....++....+.|+..||+|++..
T Consensus 65 ~d~vf~a~p~--~~s~~~~~~~~~~g~~VID~Ss~fR 99 (144)
T d2hjsa1 65 VGLAFFAAAA--EVSRAHAERARAAGCSVIDLSGALE 99 (144)
T ss_dssp CSEEEECSCH--HHHHHHHHHHHHTTCEEEETTCTTT
T ss_pred ceEEEecCCc--chhhhhccccccCCceEEeechhhc
Confidence 9999988753 2246777788899999999998764
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=97.70 E-value=0.00011 Score=59.77 Aligned_cols=103 Identities=12% Similarity=0.091 Sum_probs=71.3
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-HhccC
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CSQTK 90 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~-~~~~d 90 (420)
+++|+|+ |-+|+.+++.|.+++ +++.+.+.++++++++.+ .....+.+|.+|++.++++ +.++|
T Consensus 2 ~~iIiG~-G~~G~~la~~L~~~g-------~~vvvid~d~~~~~~~~~-------~~~~~~~gd~~~~~~l~~a~i~~a~ 66 (134)
T d2hmva1 2 QFAVIGL-GRFGGSIVKELHRMG-------HEVLAVDINEEKVNAYAS-------YATHAVIANATEENELLSLGIRNFE 66 (134)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTT-------CCCEEEESCHHHHHHTTT-------TCSEEEECCTTCTTHHHHHTGGGCS
T ss_pred EEEEECC-CHHHHHHHHHHHHCC-------CeEEEecCcHHHHHHHHH-------hCCcceeeecccchhhhccCCcccc
Confidence 4788887 899999999999998 789999999999876532 2356788999999999998 88999
Q ss_pred eeEeccCCCCCCcHHHHHHHHHcCCc-EEecCCcHHHHHH
Q 014694 91 LLLNCVGPYRLHGDPVAAACVHSGCD-YLDISGEPEFMER 129 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~Ac~~~g~~-yvdisge~~~~~~ 129 (420)
.||-+.+-......-+..++...+.. .+-.+-.....+.
T Consensus 67 ~vi~~~~~~~~~~~~~~~~~~~~~~~~iiar~~~~~~~~~ 106 (134)
T d2hmva1 67 YVIVAIGANIQASTLTTLLLKELDIPNIWVKAQNYYHHKV 106 (134)
T ss_dssp EEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCSHHHHHH
T ss_pred EEEEEcCchHHhHHHHHHHHHHcCCCcEEeecccHhHHHH
Confidence 88877653221111222333455553 3333444444443
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=97.64 E-value=0.00032 Score=58.99 Aligned_cols=118 Identities=10% Similarity=-0.005 Sum_probs=74.4
Q ss_pred CCCCCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC--CCCCCccEEEEeCCCHHH
Q 014694 4 QSQIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--SHSLSIPILTADTTDPPS 81 (420)
Q Consensus 4 ~~~~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~--~~~~~~~~i~~D~~d~~s 81 (420)
|+.++|+.+|.|+|| |.+|+.++..|+..+- .++.+.+.++++++.....+.. ........+..+ ..
T Consensus 1 ~~~~~k~~KI~IIGa-G~VG~~lA~~l~~~~~------~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~----~~ 69 (154)
T d1pzga1 1 PALVQRRKKVAMIGS-GMIGGTMGYLCALREL------ADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE----YS 69 (154)
T ss_dssp CCCCSCCCEEEEECC-SHHHHHHHHHHHHHTC------CEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE----CS
T ss_pred CccccCCCcEEEECC-CHHHHHHHHHHHhCCC------ceEEEEEeccccchhHHHHHhhhccccCCeeEEecc----Cc
Confidence 456778899999998 9999999988777652 4799999998887666555421 000111122222 12
Q ss_pred HHHHHhccCeeEeccCCCCCCc-------------------HHHHHHHHHcCC--cEEecCCcHHHHHHHHH
Q 014694 82 LHRLCSQTKLLLNCVGPYRLHG-------------------DPVAAACVHSGC--DYLDISGEPEFMERMEA 132 (420)
Q Consensus 82 l~~~~~~~dvVIn~aGp~~~~~-------------------~~vv~Ac~~~g~--~yvdisge~~~~~~~~~ 132 (420)
.++.++++|+||.++|.-...+ ..+++.+.+.+- .++.+|-....+-.+..
T Consensus 70 ~~~~~~~adiVvitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~p~aiviivsNPvd~lt~~~~ 141 (154)
T d1pzga1 70 YEAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVTNPLDCMVKVMC 141 (154)
T ss_dssp HHHHHTTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHHHHHHH
T ss_pred hhhhhcCCCeEEEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcCCCcEEEEeCCcHHHHHHHHH
Confidence 3567789999999998543211 444555555554 36666666655544443
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.62 E-value=3.8e-05 Score=65.42 Aligned_cols=45 Identities=18% Similarity=0.224 Sum_probs=41.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWAS 62 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~ 62 (420)
|+|.|+||+|.+|+.+++.|++++ ++|.+.+|++++++++.+++.
T Consensus 1 Mki~vigGaG~iG~alA~~la~~G-------~~V~l~~R~~e~~~~l~~~i~ 45 (212)
T d1jaya_ 1 MRVALLGGTGNLGKGLALRLATLG-------HEIVVGSRREEKAEAKAAEYR 45 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT-------CEEEEEESSHHHHHHHHHHHH
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHH
Confidence 689999999999999999999998 899999999999998888764
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=97.58 E-value=0.00027 Score=59.31 Aligned_cols=92 Identities=12% Similarity=-0.024 Sum_probs=58.2
Q ss_pred CCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCC--cceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHH
Q 014694 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSP--IKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHR 84 (420)
Q Consensus 7 ~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~--~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~ 84 (420)
|.++++|.|+||+|++|+.++-.|+...--+... ...+....++.++++.+..++.........-+... ....+
T Consensus 1 m~~p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 76 (154)
T d1y7ta1 1 MKAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEAT----DDPKV 76 (154)
T ss_dssp CCCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE----SCHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccC----Cchhh
Confidence 4578999999999999999999988754211000 02333345677777776655532111222223332 22457
Q ss_pred HHhccCeeEeccCCCCCC
Q 014694 85 LCSQTKLLLNCVGPYRLH 102 (420)
Q Consensus 85 ~~~~~dvVIn~aGp~~~~ 102 (420)
.++++|+||.++|.....
T Consensus 77 ~~~~advViitaG~~~~p 94 (154)
T d1y7ta1 77 AFKDADYALLVGAAPRKA 94 (154)
T ss_dssp HTTTCSEEEECCCCCCCT
T ss_pred hcccccEEEeecCcCCCC
Confidence 789999999999976543
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.56 E-value=0.00061 Score=56.73 Aligned_cols=113 Identities=17% Similarity=0.207 Sum_probs=71.5
Q ss_pred CCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC---CCCCCccEEEEeCCCHHHHH
Q 014694 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP---SHSLSIPILTADTTDPPSLH 83 (420)
Q Consensus 7 ~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~---~~~~~~~~i~~D~~d~~sl~ 83 (420)
.....+|.|+|| |++|..++..|+..+-. -++.+.++++++++....++.. .......+... |.
T Consensus 3 ~~~~~KI~IiGa-G~vG~~~a~~l~~~~l~-----~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~---d~---- 69 (148)
T d1ldna1 3 NNGGARVVVIGA-GFVGASYVFALMNQGIA-----DEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHG---DY---- 69 (148)
T ss_dssp TTTSCEEEEECC-SHHHHHHHHHHHHHTCC-----SEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEEC---CG----
T ss_pred CCCCCeEEEECc-CHHHHHHHHHHHhcCCC-----ceEEEEeeccccccchhccHhhCccccCCCeEEEEC---CH----
Confidence 445568999997 99999999999988631 4799999999887666555532 01122223222 33
Q ss_pred HHHhccCeeEeccCCCCCCc--------------HHHHHHHHHcC--CcEEecCCcHHHHHHHHH
Q 014694 84 RLCSQTKLLLNCVGPYRLHG--------------DPVAAACVHSG--CDYLDISGEPEFMERMEA 132 (420)
Q Consensus 84 ~~~~~~dvVIn~aGp~~~~~--------------~~vv~Ac~~~g--~~yvdisge~~~~~~~~~ 132 (420)
+.++++|+||.++|.....+ ..+++...+.+ ..++.+|-....+-.+..
T Consensus 70 ~~l~daDvvvitag~~~~~~~~R~dl~~~N~~i~~~i~~~i~~~~p~a~~ivvtNPvd~~t~~~~ 134 (148)
T d1ldna1 70 DDCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATNPVDILTYATW 134 (148)
T ss_dssp GGTTTCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECSSSHHHHHHHHH
T ss_pred HHhccceeEEEecccccccCcchhHHHHHHHHHHHHHHHHHHhhCCCceEEEecCccHHHHHHHH
Confidence 33678999999999654432 23344444443 346666666555544443
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=97.52 E-value=6.3e-05 Score=67.94 Aligned_cols=63 Identities=14% Similarity=0.064 Sum_probs=48.5
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH-----
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC----- 86 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~----- 86 (420)
.||||||++.||+.+++.|+++| ++|++.+|+.+++ .+|+.+.+......
T Consensus 3 VvlITGas~GIG~aiA~~la~~G-------a~V~~~~~~~~~~------------------~~d~~~~~~~~~~~~~~~~ 57 (257)
T d1fjha_ 3 IIVISGCATGIGAATRKVLEAAG-------HQIVGIDIRDAEV------------------IADLSTAEGRKQAIADVLA 57 (257)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESSSSSE------------------ECCTTSHHHHHHHHHHHHT
T ss_pred EEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECChHHH------------------HHHhcCHHHHHHHHHHHHH
Confidence 46999999999999999999998 8999999975431 34666665555433
Q ss_pred ---hccCeeEeccCCC
Q 014694 87 ---SQTKLLLNCVGPY 99 (420)
Q Consensus 87 ---~~~dvVIn~aGp~ 99 (420)
...|+++|++|..
T Consensus 58 ~~~~~id~lv~~Ag~~ 73 (257)
T d1fjha_ 58 KCSKGMDGLVLCAGLG 73 (257)
T ss_dssp TCTTCCSEEEECCCCC
T ss_pred HhCCCCcEEEEcCCCC
Confidence 2479999999853
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=97.45 E-value=0.00018 Score=60.65 Aligned_cols=65 Identities=23% Similarity=0.364 Sum_probs=50.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
|+|-|+|- |.+|+.+++.|++.+ ++|.+.+|++++++++.+.-. ..+ ++..++++++|
T Consensus 1 MkIgiIGl-G~MG~~~A~~L~~~G-------~~V~~~d~~~~~~~~~~~~~~---------~~~-----~~~~e~~~~~d 58 (161)
T d1vpda2 1 MKVGFIGL-GIMGKPMSKNLLKAG-------YSLVVSDRNPEAIADVIAAGA---------ETA-----STAKAIAEQCD 58 (161)
T ss_dssp CEEEEECC-STTHHHHHHHHHHTT-------CEEEEECSCHHHHHHHHHTTC---------EEC-----SSHHHHHHHCS
T ss_pred CEEEEEeh-hHHHHHHHHHHHHCC-------CeEEEEeCCcchhHHHHHhhh---------hhc-----ccHHHHHhCCC
Confidence 57888975 999999999999988 899999999999987765321 111 23556677888
Q ss_pred eeEeccC
Q 014694 91 LLLNCVG 97 (420)
Q Consensus 91 vVIn~aG 97 (420)
+||.|+.
T Consensus 59 ~ii~~v~ 65 (161)
T d1vpda2 59 VIITMLP 65 (161)
T ss_dssp EEEECCS
T ss_pred eEEEEcC
Confidence 8888774
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=97.42 E-value=0.00036 Score=59.35 Aligned_cols=71 Identities=15% Similarity=0.228 Sum_probs=52.5
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
..+|+|+|| |.+++.++..|.+.+ .++.++.|+.++.+++.+.+.. ...+...+..+.+ ..++
T Consensus 18 ~k~vlIlGa-GGaarai~~al~~~g-------~~i~I~nRt~~ka~~l~~~~~~----~~~~~~~~~~~~~-----~~~~ 80 (170)
T d1nyta1 18 GLRILLIGA-GGASRGVLLPLLSLD-------CAVTITNRTVSRAEELAKLFAH----TGSIQALSMDELE-----GHEF 80 (170)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTT-------CEEEEECSSHHHHHHHHHHTGG----GSSEEECCSGGGT-----TCCC
T ss_pred CCEEEEECC-cHHHHHHHHHhcccc-------eEEEeccchHHHHHHHHHHHhh----ccccccccccccc-----cccc
Confidence 357999997 789999999999987 6899999999999998887641 1223333332211 2568
Q ss_pred CeeEeccC
Q 014694 90 KLLLNCVG 97 (420)
Q Consensus 90 dvVIn~aG 97 (420)
|+||||..
T Consensus 81 dliIN~Tp 88 (170)
T d1nyta1 81 DLIINATS 88 (170)
T ss_dssp SEEEECCS
T ss_pred ceeecccc
Confidence 99999974
|
| >d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Vibrio cholerae [TaxId: 666]
Probab=97.40 E-value=9.6e-05 Score=61.81 Aligned_cols=100 Identities=14% Similarity=0.164 Sum_probs=61.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
|+|-|+|||||+|+.+++.|+++.. .+...+..+..+...-+. . ....-.....+..|.+ .++++|
T Consensus 1 mKVaIiGATGyvG~eLi~lLl~~~~---~p~~~i~~~ss~~~~gk~----~---~~~~~~~~~~~~~~~~----~~~~~D 66 (147)
T d1mb4a1 1 MRVGLVGWRGMVGSVLMQRMVEERD---FDLIEPVFFSTSQIGVPA----P---NFGKDAGMLHDAFDIE----SLKQLD 66 (147)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTG---GGGSEEEEEESSCCSSBC----C---CSSSCCCBCEETTCHH----HHTTCS
T ss_pred CEEEEECCccHHHHHHHHHHHhcCC---CCceEEEEeccccccccc----c---ccCCcceeeecccchh----hhcccc
Confidence 6899999999999999999887531 012455544433221100 0 0111112222344433 357899
Q ss_pred eeEeccCCCCCCcHHHHHHHHHcCCc--EEecCCcHHH
Q 014694 91 LLLNCVGPYRLHGDPVAAACVHSGCD--YLDISGEPEF 126 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~Ac~~~g~~--yvdisge~~~ 126 (420)
+|+.|++. .....++....+.|.. .||+|++..+
T Consensus 67 vvF~alp~--~~s~~~~~~l~~~g~~~~VIDlSsdfR~ 102 (147)
T d1mb4a1 67 AVITCQGG--SYTEKVYPALRQAGWKGYWIDAASTLRM 102 (147)
T ss_dssp EEEECSCH--HHHHHHHHHHHHTTCCSEEEESSSTTTT
T ss_pred EEEEecCc--hHHHHHhHHHHHcCCceEEEeCCccccc
Confidence 99999853 2347778888888875 8999987654
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.40 E-value=7.8e-05 Score=62.35 Aligned_cols=99 Identities=11% Similarity=0.123 Sum_probs=63.7
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccCe
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKL 91 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~dv 91 (420)
+|-|+||||++|+.+++.|+++.+ + +..++....++........ ...-.....++.+.+. ++++|+
T Consensus 3 kVaIvGATG~VGqeli~~Ll~~~~--~-p~~~l~~~~ss~s~g~~~~-------~~~~~~~~~~~~~~~~----~~~~Di 68 (146)
T d1t4ba1 3 NVGFIGWRGMVGSVLMQRMVEERD--F-DAIRPVFFSTSQLGQAAPS-------FGGTTGTLQDAFDLEA----LKALDI 68 (146)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTG--G-GGSEEEEEESSSTTSBCCG-------GGTCCCBCEETTCHHH----HHTCSE
T ss_pred EEEEECCccHHHHHHHHHHHhCCC--C-CeeEEEEeecccccccccc-------ccCCceeeecccchhh----hhcCcE
Confidence 699999999999999999887642 1 1256666666543321110 0111223334444333 578999
Q ss_pred eEeccCCCCCCcHHHHHHHHHcCCc--EEecCCcHHH
Q 014694 92 LLNCVGPYRLHGDPVAAACVHSGCD--YLDISGEPEF 126 (420)
Q Consensus 92 VIn~aGp~~~~~~~vv~Ac~~~g~~--yvdisge~~~ 126 (420)
+|.|++- .....++..+.+.|.+ .||.|++..+
T Consensus 69 vF~a~~~--~~s~~~~~~~~~~g~~~~VID~Ss~fR~ 103 (146)
T d1t4ba1 69 IVTCQGG--DYTNEIYPKLRESGWQGYWIDAASSLRM 103 (146)
T ss_dssp EEECSCH--HHHHHHHHHHHHTTCCCEEEECSSTTTT
T ss_pred EEEecCc--hHHHHhhHHHHhcCCCeecccCCccccc
Confidence 9999852 2346777888888875 8899877654
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.40 E-value=0.0016 Score=53.93 Aligned_cols=83 Identities=20% Similarity=0.218 Sum_probs=54.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh--hHHHHHHHHhCC---CCCCCccEEEEeCCCHHHHHHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASP---SHSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~--~kl~~~~~~l~~---~~~~~~~~i~~D~~d~~sl~~~ 85 (420)
|+|.|+||+|.+|+.++..|+.++-. -++.+.++++ .+++.+..++.. ....+..+....-.|. +.
T Consensus 1 MKV~IiGA~G~VG~~~a~~l~~~~l~-----~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~----~~ 71 (145)
T d1hyea1 1 MKVTIIGASGRVGSATALLLAKEPFM-----KDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENL----RI 71 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTC-----CEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCG----GG
T ss_pred CEEEEECCCChHHHHHHHHHHhCCcc-----cccccccchhhhHhhhcccccchhcccccccCCccccCCcchH----HH
Confidence 68999999999999999988887621 4899999875 344444333321 1123334333322232 35
Q ss_pred HhccCeeEeccCCCCCC
Q 014694 86 CSQTKLLLNCVGPYRLH 102 (420)
Q Consensus 86 ~~~~dvVIn~aGp~~~~ 102 (420)
++++|+||-+||.....
T Consensus 72 l~~aDvVVitAG~~~~~ 88 (145)
T d1hyea1 72 IDESDVVIITSGVPRKE 88 (145)
T ss_dssp GTTCSEEEECCSCCCCT
T ss_pred hccceEEEEecccccCC
Confidence 67899999999965543
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.40 E-value=0.0015 Score=54.00 Aligned_cols=108 Identities=19% Similarity=0.056 Sum_probs=71.0
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccCe
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKL 91 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~dv 91 (420)
+|.|+||+|.+|+.++..|+..+-. -++++.+.++.+.+. .++.. .....-.. ......+..+.++++|+
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~~~~-----~elvLiDi~~~~~~a--~Dl~~--~~~~~~~~-~~~~~~~~~~~~~~aDi 71 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNSPLV-----SRLTLYDIAHTPGVA--ADLSH--IETRATVK-GYLGPEQLPDCLKGCDV 71 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTC-----SEEEEEESSSHHHHH--HHHTT--SSSSCEEE-EEESGGGHHHHHTTCSE
T ss_pred eEEEECCCChHHHHHHHHHHhCCcc-----ceEEEEeccccchhh--HHHhh--hhhhcCCC-eEEcCCChHHHhCCCCE
Confidence 6999999999999999888776521 478999988766543 34431 11111111 22235667788899999
Q ss_pred eEeccCCCCCCc--------------HHHHHHHHHcCC--cEEecCCcHHHHHH
Q 014694 92 LLNCVGPYRLHG--------------DPVAAACVHSGC--DYLDISGEPEFMER 129 (420)
Q Consensus 92 VIn~aGp~~~~~--------------~~vv~Ac~~~g~--~yvdisge~~~~~~ 129 (420)
||.++|.-...+ ..+++++.+++- .++.+|-....+-.
T Consensus 72 vVitag~~~~~g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivvtNPvD~~t~ 125 (144)
T d1mlda1 72 VVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNPVNSTIP 125 (144)
T ss_dssp EEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSCHHHHHH
T ss_pred EEECCCcCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEecCchhhhHH
Confidence 999999543322 566777777754 47777766664433
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=97.38 E-value=0.00015 Score=64.69 Aligned_cols=57 Identities=9% Similarity=0.050 Sum_probs=47.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
..+|||||++.||+.+++.|+++| ++|++.+|++++. +...+.+|+.+......+..
T Consensus 2 K~alITGas~GIG~aiA~~la~~G-------a~V~i~~~~~~~~-------------~~~~~~~d~~~~~~~~~~~~ 58 (241)
T d1uaya_ 2 RSALVTGGASGLGRAAALALKARG-------YRVVVLDLRREGE-------------DLIYVEGDVTREEDVRRAVA 58 (241)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHT-------CEEEEEESSCCSS-------------SSEEEECCTTCHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECCcccc-------------cceEeeccccchhhhHHHHH
Confidence 368999999999999999999998 8999999986543 34567889998877777654
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=97.34 E-value=0.00067 Score=57.54 Aligned_cols=47 Identities=21% Similarity=0.082 Sum_probs=39.9
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhC
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWAS 62 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~ 62 (420)
+..+|+|+|+ |.+++.++..|.+.+. -++.++.|+.++.+.+.+.++
T Consensus 16 ~~~~vlIlGa-GGaarai~~aL~~~g~------~~I~I~nR~~~ka~~L~~~~~ 62 (167)
T d1npya1 16 KNAKVIVHGS-GGMAKAVVAAFKNSGF------EKLKIYARNVKTGQYLAALYG 62 (167)
T ss_dssp TTSCEEEECS-STTHHHHHHHHHHTTC------CCEEEECSCHHHHHHHHHHHT
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCC------CEEEEecccHHHHHHHHHhhh
Confidence 4567999998 8899999999999872 478999999999988887764
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=97.29 E-value=0.0014 Score=53.83 Aligned_cols=80 Identities=14% Similarity=0.080 Sum_probs=55.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC--CCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--SHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~--~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
|+|.|+|| |.+|..++..|+..+- .-++.+.++++++++....++.. +......+.. .|.+ .+++
T Consensus 1 mKI~IIGa-G~VG~~~a~~l~~~~l-----~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~---~~~~----~~~~ 67 (140)
T d1a5za1 1 MKIGIVGL-GRVGSSTAFALLMKGF-----AREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYA---GDYA----DLKG 67 (140)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTC-----CSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEE---CCGG----GGTT
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCC-----CCEEEEEecccccccchhccccccccccccccccC---CcHH----HhcC
Confidence 68999997 9999999998888763 14799999999887765544421 1112223322 2332 3678
Q ss_pred cCeeEeccCCCCCCc
Q 014694 89 TKLLLNCVGPYRLHG 103 (420)
Q Consensus 89 ~dvVIn~aGp~~~~~ 103 (420)
+|+||.++|.....+
T Consensus 68 adivvitag~~~~~g 82 (140)
T d1a5za1 68 SDVVIVAAGVPQKPG 82 (140)
T ss_dssp CSEEEECCCCCCCSS
T ss_pred CCEEEEecccccCCC
Confidence 999999999765543
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=97.24 E-value=0.00099 Score=55.04 Aligned_cols=109 Identities=16% Similarity=0.114 Sum_probs=65.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC--CCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--SHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~--~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
.+|.|+|| |.+|..++-.|+..+- .-++.+.++++++++....++.. .......+... |. +.+++
T Consensus 2 ~KI~IIGa-G~VG~~~a~~l~~~~l-----~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~---~~----~~~~~ 68 (142)
T d1y6ja1 2 SKVAIIGA-GFVGASAAFTMALRQT-----ANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG---DY----SDVKD 68 (142)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTC-----SSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CG----GGGTT
T ss_pred CeEEEECC-CHHHHHHHHHHHhcCC-----CCEEEEEeccCCccceeeeeeccCcccCCCeeEeeC---cH----HHhCC
Confidence 37999997 9999999999988762 14799999999887666666643 11112222221 22 34788
Q ss_pred cCeeEeccCCCCCCc--------------HHHHHHHHHcCC--cEEecCCcHHHHHHHHH
Q 014694 89 TKLLLNCVGPYRLHG--------------DPVAAACVHSGC--DYLDISGEPEFMERMEA 132 (420)
Q Consensus 89 ~dvVIn~aGp~~~~~--------------~~vv~Ac~~~g~--~yvdisge~~~~~~~~~ 132 (420)
+|+||.++|.....+ ..+++.+.+.+- .++.+|-....+-.+..
T Consensus 69 adivvitag~~~~~~~~r~~l~~~N~~i~~~i~~~i~~~~p~ai~ivvtNPvdv~t~~~~ 128 (142)
T d1y6ja1 69 CDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNPVDIITYMIQ 128 (142)
T ss_dssp CSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECSSSHHHHHHHHH
T ss_pred CceEEEecccccCcCcchhHHhhHHHHHHHHHHHHhhccCCCceEEEecChHHHHHHHHH
Confidence 999999999654433 344555555543 36667666655544443
|
| >d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Thermotoga maritima [TaxId: 2336]
Probab=97.20 E-value=0.00015 Score=62.45 Aligned_cols=96 Identities=16% Similarity=0.249 Sum_probs=57.4
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEe-cCh--hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAG-RNP--TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iag-Rs~--~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
++|-|+|||||+|+.+++.|.+|-. .++..+. |+. +++..+...+. ... .....|. +.+.+
T Consensus 2 ikVaIvGATGyvG~eLirlL~~HP~------~ei~~l~s~~~aG~~i~~~~p~~~----~~~---~~~~~~~---~~~~~ 65 (176)
T d1vkna1 2 IRAGIIGATGYTGLELVRLLKNHPE------AKITYLSSRTYAGKKLEEIFPSTL----ENS---ILSEFDP---EKVSK 65 (176)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHCTT------EEEEEEECSTTTTSBHHHHCGGGC----CCC---BCBCCCH---HHHHH
T ss_pred eEEEEECCCcHHHHHHHHHHHhCCC------ceEEEeeccccCCCcccccCchhh----ccc---cccccCH---hHhcc
Confidence 5799999999999999999988742 6665443 322 22332222221 111 1122333 34456
Q ss_pred ccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHH
Q 014694 88 QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEF 126 (420)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~ 126 (420)
++|+|+.+..-- .....+. ...++..||+|++..+
T Consensus 66 ~~dvvf~a~p~~--~s~~~~~--~~~~~~VIDlSadfRl 100 (176)
T d1vkna1 66 NCDVLFTALPAG--ASYDLVR--ELKGVKIIDLGADFRF 100 (176)
T ss_dssp HCSEEEECCSTT--HHHHHHT--TCCSCEEEESSSTTTC
T ss_pred ccceEEEccccH--HHHHHHH--hhccceEEecCccccc
Confidence 899999877531 1122222 3467889999998766
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=97.19 E-value=0.0018 Score=53.45 Aligned_cols=111 Identities=17% Similarity=0.253 Sum_probs=70.3
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC--CCCCCccEEEEeCCCHHHHHHHHh
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--SHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~--~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
|.+|.|+|| |.+|..++..|+.++-. -++.+.++++++++....++.. .......+... .|.+ .++
T Consensus 1 p~Ki~IIGa-G~VG~~~a~~l~~~~l~-----~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~--~~~~----~~~ 68 (143)
T d1llda1 1 PTKLAVIGA-GAVGSTLAFAAAQRGIA-----REIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDPE----ICR 68 (143)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCC-----SEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCGG----GGT
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCC-----cEEEEEEeccccchhHHHHHHhccccCCCceeecC--CCHH----Hhh
Confidence 457999997 99999999999988631 4799999999887655444431 01122233222 2322 367
Q ss_pred ccCeeEeccCCCCCCc--------------HHHHHHHHHcCC--cEEecCCcHHHHHHHHH
Q 014694 88 QTKLLLNCVGPYRLHG--------------DPVAAACVHSGC--DYLDISGEPEFMERMEA 132 (420)
Q Consensus 88 ~~dvVIn~aGp~~~~~--------------~~vv~Ac~~~g~--~yvdisge~~~~~~~~~ 132 (420)
++|+||.++|.....+ ..+++.+.+.+- .++.+|-....+-.+..
T Consensus 69 daDvVVitaG~~~~~g~~R~dl~~~N~~i~~~i~~~i~~~~p~ai~ivvtNPvDvmt~~~~ 129 (143)
T d1llda1 69 DADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNPVDIATHVAQ 129 (143)
T ss_dssp TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHHHHH
T ss_pred CCcEEEEecccccCCCCchhhhhhhhHHHHHHHHHHHHhhCCCeEEEEeCCchHHHHHHHH
Confidence 8999999999766543 334445555543 36666655555544443
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=97.17 E-value=0.00086 Score=55.66 Aligned_cols=76 Identities=11% Similarity=0.133 Sum_probs=62.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-Hhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~-~~~~ 89 (420)
-.|+|.|. |-+|+.+++.|.+.+ .++.+...++++.....++.. ..++.++.+|.+|++.|+++ +.++
T Consensus 4 nHiII~G~-g~~g~~l~~~L~~~~-------~~v~vId~d~~~~~~~~~~~~---~~~~~vi~Gd~~d~~~L~~a~i~~a 72 (153)
T d1id1a_ 4 DHFIVCGH-SILAINTILQLNQRG-------QNVTVISNLPEDDIKQLEQRL---GDNADVIPGDSNDSSVLKKAGIDRC 72 (153)
T ss_dssp SCEEEECC-SHHHHHHHHHHHHTT-------CCEEEEECCCHHHHHHHHHHH---CTTCEEEESCTTSHHHHHHHTTTTC
T ss_pred CEEEEECC-CHHHHHHHHHHHHcC-------CCEEEEeccchhHHHHHHHhh---cCCcEEEEccCcchHHHHHhccccC
Confidence 36889887 889999999999987 788999999887665555542 24688999999999999887 6789
Q ss_pred CeeEeccC
Q 014694 90 KLLLNCVG 97 (420)
Q Consensus 90 dvVIn~aG 97 (420)
+.||-+.+
T Consensus 73 ~~vi~~~~ 80 (153)
T d1id1a_ 73 RAILALSD 80 (153)
T ss_dssp SEEEECSS
T ss_pred CEEEEccc
Confidence 99987765
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=97.16 E-value=0.0016 Score=53.53 Aligned_cols=109 Identities=13% Similarity=0.097 Sum_probs=68.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCC---CCCCccEEEEeCCCHHHHHHHHh
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS---HSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~---~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
|+|.|+|| |.+|..++..|+..+- .-++.+.++++++++.....+... ...+..+... +|.+ .++
T Consensus 1 mKI~IIGa-G~VG~~la~~l~~~~l-----~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~~----~~~ 68 (142)
T d1guza1 1 MKITVIGA-GNVGATTAFRLAEKQL-----ARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYA----DTA 68 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC-----CSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGG----GGT
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCC-----CceEEEeccccccchhhhhhhhcccchhcccceEEec--CCHH----Hhc
Confidence 68999997 9999999999888762 148999999998876555444210 1123333322 2333 368
Q ss_pred ccCeeEeccCCCCCCc--------------HHHHHHHHHcCC--cEEecCCcHHHHHHHH
Q 014694 88 QTKLLLNCVGPYRLHG--------------DPVAAACVHSGC--DYLDISGEPEFMERME 131 (420)
Q Consensus 88 ~~dvVIn~aGp~~~~~--------------~~vv~Ac~~~g~--~yvdisge~~~~~~~~ 131 (420)
++|+||.++|.....+ ..+++++.+.+- .++.+|-....+-.+.
T Consensus 69 dadvvvitag~~~~~g~~r~~l~~~N~~i~~~i~~~i~~~~p~aivivvtNPvd~~~~~~ 128 (142)
T d1guza1 69 NSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNPLDIMTHVA 128 (142)
T ss_dssp TCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECCSSHHHHHHHH
T ss_pred CCeEEEEEEecCCCCCCchHHHHHHHHHHHHHHHHHhhccCCCeEEEEecCChHHHHHHH
Confidence 9999999999655443 334445555442 3566665555544433
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.16 E-value=0.0036 Score=51.73 Aligned_cols=110 Identities=15% Similarity=0.044 Sum_probs=64.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
|+|.|+||+|.+|+.++-.|+...+- ..++.+.+..+ +.+....++.. ......... +....+ .+.++++|
T Consensus 1 MKV~IiGaaG~VG~~~a~~l~~~~~~----~~el~L~D~~~-~~~g~a~Dl~h-~~~~~~~~~--~~~~~~-~~~~~~aD 71 (145)
T d2cmda1 1 MKVAVLGAAGGIGQALALLLKTQLPS----GSELSLYDIAP-VTPGVAVDLSH-IPTAVKIKG--FSGEDA-TPALEGAD 71 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCT----TCEEEEECSST-THHHHHHHHHT-SCSSCEEEE--ECSSCC-HHHHTTCS
T ss_pred CEEEEEcCCChHHHHHHHHHHhCCCC----CcEEEEecccc-cchhHHHHHHC-CccccCCcE--EEcCCC-ccccCCCC
Confidence 68999999999999999877654210 15789999864 44444444431 111111111 111122 23578999
Q ss_pred eeEeccCCCCCCc--------------HHHHHHHHHcCC--cEEecCCcHHHHHH
Q 014694 91 LLLNCVGPYRLHG--------------DPVAAACVHSGC--DYLDISGEPEFMER 129 (420)
Q Consensus 91 vVIn~aGp~~~~~--------------~~vv~Ac~~~g~--~yvdisge~~~~~~ 129 (420)
+||.++|.....+ ..+++.+.+.+- .++.+|-...-+-.
T Consensus 72 vvvitaG~~~k~g~~R~dl~~~N~~i~~~v~~~i~~~~p~aivivvtNPvD~m~~ 126 (145)
T d2cmda1 72 VVLISAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNPVNTTVA 126 (145)
T ss_dssp EEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSSHHHHHH
T ss_pred EEEECCCccCCCCcchhhHHHHHHHHHHHHHHHHHhhCCCcEEEEccCCchHHHH
Confidence 9999999654332 445555555543 36666665554433
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=97.14 E-value=0.00083 Score=56.91 Aligned_cols=91 Identities=12% Similarity=0.050 Sum_probs=60.4
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~-~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
.+|.|+|| |.+|..++..|++++ ++|.+.+|++++++.+.+.-.. .................++.+.++++
T Consensus 2 k~iaIiGa-G~~G~~~A~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~a 73 (184)
T d1bg6a2 2 KTYAVLGL-GNGGHAFAAYLALKG-------QSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDA 73 (184)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT-------CEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTC
T ss_pred CEEEEECc-cHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCC
Confidence 47999998 999999999999998 8999999999998877654211 00111122211111123467888999
Q ss_pred CeeEeccCCCCCCcHHHHHHHH
Q 014694 90 KLLLNCVGPYRLHGDPVAAACV 111 (420)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~Ac~ 111 (420)
|+||-++..+.. +.+++...
T Consensus 74 D~iii~v~~~~~--~~~~~~i~ 93 (184)
T d1bg6a2 74 DVILIVVPAIHH--ASIAANIA 93 (184)
T ss_dssp SEEEECSCGGGH--HHHHHHHG
T ss_pred CEEEEEEchhHH--HHHHHHhh
Confidence 999998854432 44444443
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=97.13 E-value=0.005 Score=51.71 Aligned_cols=114 Identities=16% Similarity=0.131 Sum_probs=72.0
Q ss_pred CCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHHH
Q 014694 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 8 ~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~-~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
..+.+|.|+|+ |.+|..++-.|+..+-. -++.+.++++++.+....++.. ........+.. ..|.+ .+
T Consensus 18 ~~~~KV~IIGa-G~VG~~~A~~l~~~~l~-----~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~-~~d~~----~~ 86 (160)
T d1i0za1 18 VPNNKITVVGV-GQVGMACAISILGKSLA-----DELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVA-DKDYS----VT 86 (160)
T ss_dssp CCSSEEEEECC-SHHHHHHHHHHHHTTCC-----SEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEE-CSSGG----GG
T ss_pred CCCCeEEEECC-CHHHHHHHHHHHhcCCC-----cEEEEEEeccchhHHHHHHHhccccccCCCeEEe-ccchh----hc
Confidence 34469999997 99999999999998731 4799999999887666655532 00112222222 23333 36
Q ss_pred hccCeeEeccCCCCCCc--------------HHHHHHHHHcCC--cEEecCCcHHHHHHHHH
Q 014694 87 SQTKLLLNCVGPYRLHG--------------DPVAAACVHSGC--DYLDISGEPEFMERMEA 132 (420)
Q Consensus 87 ~~~dvVIn~aGp~~~~~--------------~~vv~Ac~~~g~--~yvdisge~~~~~~~~~ 132 (420)
+++|+||.++|.....+ ..+++...+.+- -++.+|-....+-.+..
T Consensus 87 ~~adiVVitAg~~~~~g~tR~~l~~~N~~i~~~i~~~i~~~~p~aiiivvtNPvDv~t~~~~ 148 (160)
T d1i0za1 87 ANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVVSNPVDILTYVTW 148 (160)
T ss_dssp TTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHHHH
T ss_pred ccccEEEEecCCccccCcchHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchHHHHHHHH
Confidence 78999999999755432 334444455443 26666666555544443
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=97.12 E-value=0.00085 Score=56.90 Aligned_cols=75 Identities=17% Similarity=0.186 Sum_probs=61.9
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
++-+|+|+|| |-.|...++-..+.+ .+|.+.+.+.++++++..... ..++ .-..+.+.+++.+++
T Consensus 31 ~pa~V~ViGa-GvaG~~A~~~A~~lG-------A~V~~~D~~~~~l~~l~~~~~----~~~~---~~~~~~~~l~~~~~~ 95 (168)
T d1pjca1 31 KPGKVVILGG-GVVGTEAAKMAVGLG-------AQVQIFDINVERLSYLETLFG----SRVE---LLYSNSAEIETAVAE 95 (168)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHG----GGSE---EEECCHHHHHHHHHT
T ss_pred CCcEEEEECC-ChHHHHHHHHHhhCC-------CEEEEEeCcHHHHHHHHHhhc----ccce---eehhhhhhHHHhhcc
Confidence 5678999997 999999999998888 799999999999988776653 2222 334578899999999
Q ss_pred cCeeEeccCC
Q 014694 89 TKLLLNCVGP 98 (420)
Q Consensus 89 ~dvVIn~aGp 98 (420)
+|+||.++=.
T Consensus 96 aDivI~aali 105 (168)
T d1pjca1 96 ADLLIGAVLV 105 (168)
T ss_dssp CSEEEECCCC
T ss_pred CcEEEEeeec
Confidence 9999999863
|
| >d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Salmonella typhimurium [TaxId: 90371]
Probab=97.11 E-value=0.00032 Score=60.30 Aligned_cols=101 Identities=15% Similarity=0.293 Sum_probs=62.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEE-EecC----h-hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLAL-AGRN----P-TRVKQALQWASPSHSLSIPILTADTTDPPSLHR 84 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~i-agRs----~-~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~ 84 (420)
++|.|.|||||+|+.+++.|.+|.. +++.. ..++ . +++......+. ..........+ + ...
T Consensus 2 ikVaIiGATGyvG~eLlrlL~~HP~------~ei~~l~~~s~~~~aGk~~~~~~~~~~--~~~~~~~~~~~--~---~~~ 68 (179)
T d2g17a1 2 LNTLIVGASGYAGAELVSYVNRHPH------MTITALTVSAQSNDAGKLISDLHPQLK--GIVDLPLQPMS--D---VRD 68 (179)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTT------EEEEEEEEETTCTTTTCBHHHHCGGGT--TTCCCBEEEES--C---GGG
T ss_pred cEEEEECcccHHHHHHHHHHHhCCC------CceEeeEeecccccccccccccccccc--cccccccccch--h---hhh
Confidence 5899999999999999999998842 66643 3332 1 22333222221 11122222222 2 222
Q ss_pred HHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHH
Q 014694 85 LCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEF 126 (420)
Q Consensus 85 ~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~ 126 (420)
...++|+|+.|.+.- .....+....+.++..||+|++..+
T Consensus 69 ~~~~~dvvf~alp~~--~s~~~~~~~~~~~~~vIDlSadfRl 108 (179)
T d2g17a1 69 FSADVDVVFLATAHE--VSHDLAPQFLQAGCVVFDLSGAFRV 108 (179)
T ss_dssp TCTTCCEEEECSCHH--HHHHHHHHHHHTTCEEEECSSTTSS
T ss_pred hhcccceeeccccch--hHHHHhhhhhhcCceeecccccccc
Confidence 345789999987542 2356777888999999999986543
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.10 E-value=0.0011 Score=55.78 Aligned_cols=40 Identities=18% Similarity=0.179 Sum_probs=35.1
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHH
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQ 59 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~ 59 (420)
+|-++| .|.+|..++++|++++ ++|.+.+|+.++.+.+.+
T Consensus 3 kIg~IG-lG~MG~~iA~~L~~~g-------~~v~~~d~~~~~~~~~~~ 42 (162)
T d3cuma2 3 QIAFIG-LGHMGAPMATNLLKAG-------YLLNVFDLVQSAVDGLVA 42 (162)
T ss_dssp EEEEEC-CSTTHHHHHHHHHHTT-------CEEEEECSSHHHHHHHHH
T ss_pred EEEEEE-EHHHHHHHHHHHHHCC-------CeEEEEECchhhhhhhhh
Confidence 588886 5999999999999998 899999999999876654
|
| >d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.08 E-value=8.8e-05 Score=62.48 Aligned_cols=98 Identities=17% Similarity=0.174 Sum_probs=60.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
|+|-|+|||||+|+.+++-|.+|.- +..++.....+.+.-+ .+. .........+..+ ..+.+.|
T Consensus 2 ~kVaIvGATGyvG~eLirlL~~H~f----p~~~l~~~~s~~s~G~----~~~---~~~~~~~~~~~~~-----~~~~~~d 65 (154)
T d2gz1a1 2 YTVAVVGATGAVGAQMIKMLEESTL----PIDKIRYLASARSAGK----SLK---FKDQDITIEETTE-----TAFEGVD 65 (154)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCCS----CEEEEEEEECGGGTTC----EEE---ETTEEEEEEECCT-----TTTTTCS
T ss_pred CEEEEECCCcHHHHHHHHHHHcCCC----CceEEEEecccccccc----ccc---ccCCcccccccch-----hhhhhhh
Confidence 7899999999999999998877741 1145554443222110 110 0011122223322 2245688
Q ss_pred eeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHH
Q 014694 91 LLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEF 126 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~ 126 (420)
+++.++++.. ....+....+.|+..||+|++..+
T Consensus 66 ~~f~~~~~~~--s~~~~~~~~~~~~~VIDlSsdfR~ 99 (154)
T d2gz1a1 66 IALFSAGSST--SAKYAPYAVKAGVVVVDNTSYFRQ 99 (154)
T ss_dssp EEEECSCHHH--HHHHHHHHHHTTCEEEECSSTTTT
T ss_pred hhhhccCccc--hhhHHhhhccccceehhcChhhhc
Confidence 8888886532 356667778899999999988763
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=97.08 E-value=0.0034 Score=51.73 Aligned_cols=107 Identities=10% Similarity=0.050 Sum_probs=64.2
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC--hhHHHHHHHHhCC--CCCCCccEEEEeCCCHHHHHHHHh
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN--PTRVKQALQWASP--SHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs--~~kl~~~~~~l~~--~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
+|.|+||+|.+|+.++..|+.++-. -++.+.+.+ +++++....++.. .......+... +.++ ++
T Consensus 2 KV~IiGaaG~VG~~~A~~l~~~~l~-----~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~---~~~~----~~ 69 (142)
T d1o6za1 2 KVSVVGAAGTVGAAAGYNIALRDIA-----DEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQG---GYED----TA 69 (142)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCC-----SEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEEC---CGGG----GT
T ss_pred eEEEECCCCcHHHHHHHHHHhCCCC-----CEEEEEecCCcccccceeecchhhcccccCCceEeeC---CHHH----hh
Confidence 6999999999999999999887631 378888854 4444433333321 11223333333 3333 57
Q ss_pred ccCeeEeccCCCCCCc--------------HHHHHHHHHcCC--cEEecCCcHHHHHHH
Q 014694 88 QTKLLLNCVGPYRLHG--------------DPVAAACVHSGC--DYLDISGEPEFMERM 130 (420)
Q Consensus 88 ~~dvVIn~aGp~~~~~--------------~~vv~Ac~~~g~--~yvdisge~~~~~~~ 130 (420)
++|+||.++|.....+ ..+++...+.+- .++.+|-....+-..
T Consensus 70 ~aDiVvitaG~~~~~g~~R~dl~~~N~~I~~~i~~~i~~~~p~~i~ivvtNPvDvmt~~ 128 (142)
T d1o6za1 70 GSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNPVDLLNRH 128 (142)
T ss_dssp TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCSSHHHHHHH
T ss_pred hcCEEEEecccccccCCchhhHHHHHHHHHHHHHHHHHhcCCCceEEEecChHHHHHHH
Confidence 9999999999654433 334444444432 356666555544433
|
| >d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Acetaldehyde dehydrogenase (acylating) species: Pseudomonas sp. [TaxId: 306]
Probab=97.04 E-value=0.00064 Score=57.24 Aligned_cols=102 Identities=14% Similarity=0.196 Sum_probs=60.2
Q ss_pred CCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceE-EEEecChh-HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHH
Q 014694 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNPT-RVKQALQWASPSHSLSIPILTADTTDPPSLHR 84 (420)
Q Consensus 7 ~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v-~iagRs~~-kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~ 84 (420)
|+++++|-|+| +|.+|+.....+++..+ ..++ ++++|+.+ +.....++.+ +++. ..+.+++.+
T Consensus 1 M~kkirvaIIG-aG~ig~~~~~~~l~~~~-----~~el~avas~~~~~~~~~~a~~~~------i~~~---~~~~d~l~~ 65 (157)
T d1nvmb1 1 MNQKLKVAIIG-SGNIGTDLMIKVLRNAK-----YLEMGAMVGIDAASDGLARAQRMG------VTTT---YAGVEGLIK 65 (157)
T ss_dssp CCSCEEEEEEC-CSHHHHHHHHHHHHHCS-----SEEEEEEECSCTTCHHHHHHHHTT------CCEE---SSHHHHHHH
T ss_pred CCCCcEEEEEc-CcHHHHHHHHHHHhhCC-----cceEEEEEecchhccchhhhhhcC------Cccc---ccceeeeee
Confidence 45679999999 89999865544555542 1444 66788765 3334444442 2222 223455555
Q ss_pred HH--hccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCc
Q 014694 85 LC--SQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGE 123 (420)
Q Consensus 85 ~~--~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge 123 (420)
.. .++|+|+.+.-..........-.+.++|++.||.|.+
T Consensus 66 ~~~~~~iDiVf~ATpag~h~~~~~~~~aa~~G~~VID~s~a 106 (157)
T d1nvmb1 66 LPEFADIDFVFDATSASAHVQNEALLRQAKPGIRLIDLTPA 106 (157)
T ss_dssp SGGGGGEEEEEECSCHHHHHHHHHHHHHHCTTCEEEECSTT
T ss_pred cccccccCEEEEcCCchhHHHhHHHHHHHHcCCEEEEcccc
Confidence 43 4789999876432211122233346889999999974
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=97.01 E-value=0.00068 Score=62.23 Aligned_cols=38 Identities=13% Similarity=-0.028 Sum_probs=33.0
Q ss_pred cceEEEEcCCc--HHHHHHHHHHHHhCCCCCCCcceEEEEecChhHH
Q 014694 10 LFDVIILGASG--FTGKYVVREALKLFNFPSSPIKSLALAGRNPTRV 54 (420)
Q Consensus 10 ~~~IvV~GATG--~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl 54 (420)
...+||+||+| .||+.+++.|+++| .+|++.+|+....
T Consensus 8 gK~alVTGass~~GIG~aiA~~la~~G-------a~Vvi~~~~~~~~ 47 (297)
T d1d7oa_ 8 GKRAFIAGIADDNGYGWAVAKSLAAAG-------AEILVGTWVPALN 47 (297)
T ss_dssp TCEEEEECCSSSSSHHHHHHHHHHHTT-------CEEEEEEEHHHHH
T ss_pred CCEEEEECCCCCchHHHHHHHHHHHCC-------CEEEEEeCchhhh
Confidence 34799999987 89999999999998 8999999976543
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.97 E-value=0.0073 Score=49.55 Aligned_cols=109 Identities=16% Similarity=0.138 Sum_probs=68.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC---CCCCCccEEEEeCCCHHHHHHHHh
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP---SHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~---~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
|+|.|+|| |.+|..++..|+.++.. -++.+.++++++.+....++.. .......+... .|. +.++
T Consensus 1 MKI~IIGa-G~VG~~~a~~l~~~~~~-----~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~--~d~----~~~~ 68 (142)
T d1ojua1 1 MKLGFVGA-GRVGSTSAFTCLLNLDV-----DEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADY----SLLK 68 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCC-----SEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCG----GGGT
T ss_pred CEEEEECc-CHHHHHHHHHHHhcCcC-----ceEEEEecccchhhHHHHHHhhhccccCCCCccccC--CCH----HHhc
Confidence 68999997 99999999988887631 4799999999887655444421 01112233322 232 2577
Q ss_pred ccCeeEeccCCCCCCc--------------HHHHHHHHHcCC--cEEecCCcHHHHHHHH
Q 014694 88 QTKLLLNCVGPYRLHG--------------DPVAAACVHSGC--DYLDISGEPEFMERME 131 (420)
Q Consensus 88 ~~dvVIn~aGp~~~~~--------------~~vv~Ac~~~g~--~yvdisge~~~~~~~~ 131 (420)
++|+||-++|.-...+ ..+.+.+.+.+- .++.+|-..+.+-.+.
T Consensus 69 ~adiVvitag~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~p~aivivvtNPvD~~t~~~ 128 (142)
T d1ojua1 69 GSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPMDVMTYIM 128 (142)
T ss_dssp TCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSHHHHHHHH
T ss_pred cccEEEEeccccCCCCCchHHHHHHhhHHHHHHHHHHHhhCCCcEEEEecCChHHHHHHH
Confidence 8999999999544433 334444455442 4666666555544433
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=96.92 E-value=0.015 Score=49.29 Aligned_cols=93 Identities=13% Similarity=0.045 Sum_probs=57.0
Q ss_pred CCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh--hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHH
Q 014694 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASPSHSLSIPILTADTTDPPSLHR 84 (420)
Q Consensus 7 ~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~--~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~ 84 (420)
..++.+|.|+||+|.+|+.++-.|++..--+......+.+.+.+. ++++.+.-++..-......-+..- ....+
T Consensus 21 ~k~~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~----~~~~~ 96 (175)
T d7mdha1 21 WKKLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIG----IDPYE 96 (175)
T ss_dssp CCCCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE----SCHHH
T ss_pred cCCCcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCcccc----ccchh
Confidence 456779999999999999999998874310101114566666544 556655544431011112222211 23567
Q ss_pred HHhccCeeEeccCCCCCCc
Q 014694 85 LCSQTKLLLNCVGPYRLHG 103 (420)
Q Consensus 85 ~~~~~dvVIn~aGp~~~~~ 103 (420)
.++++|+||-++|.....|
T Consensus 97 ~~~~aDvVvi~ag~~rkpg 115 (175)
T d7mdha1 97 VFEDVDWALLIGAKPRGPG 115 (175)
T ss_dssp HTTTCSEEEECCCCCCCTT
T ss_pred hccCCceEEEeeccCCCCC
Confidence 8899999999999765543
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=96.90 E-value=0.005 Score=51.17 Aligned_cols=121 Identities=12% Similarity=-0.040 Sum_probs=69.5
Q ss_pred CCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC--hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 014694 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN--PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 8 ~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs--~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~ 85 (420)
+++++|.|+||+|.+|+.++-.|++...........+.+.+.+ .++++.+..++..........+..- ....+.
T Consensus 1 s~p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~ 76 (154)
T d5mdha1 1 SEPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIAT----DKEEIA 76 (154)
T ss_dssp CCCEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEE----SCHHHH
T ss_pred CCceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccC----cccccc
Confidence 4689999999999999999999886542110111456666654 3555555433321011122222221 224577
Q ss_pred HhccCeeEeccCCCCCCc--------------HHHHHHHHH-cCC--cEEecCCcHHHHHHHHH
Q 014694 86 CSQTKLLLNCVGPYRLHG--------------DPVAAACVH-SGC--DYLDISGEPEFMERMEA 132 (420)
Q Consensus 86 ~~~~dvVIn~aGp~~~~~--------------~~vv~Ac~~-~g~--~yvdisge~~~~~~~~~ 132 (420)
++++|+||-++|.-...+ ..+++.+.+ ++- ..+.+|.....+-.+..
T Consensus 77 ~~~~dvVVitag~~~~~g~sr~dll~~N~~i~k~~~~~i~k~a~~~~~iivvsNPvD~mt~v~~ 140 (154)
T d5mdha1 77 FKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNPANTNCLTAS 140 (154)
T ss_dssp TTTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHH
T ss_pred cCCceEEEEecccCCCCCCchhHHHHHhHHHHHHHHHHHHhhCCCceEEEEecCcHHHHHHHHH
Confidence 889999999999654332 344445544 343 34566766555555443
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.89 E-value=0.002 Score=54.41 Aligned_cols=75 Identities=11% Similarity=0.034 Sum_probs=53.8
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
+.-+|+|+||+|.+|...++.+...+ .+++++.+++++++. +++++ .. ...|.++.+-.+++.+
T Consensus 28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G-------~~vi~~~~~~~~~~~-~~~~G------a~-~vi~~~~~~~~~~i~~~ 92 (174)
T d1yb5a2 28 AGESVLVHGASGGVGLAACQIARAYG-------LKILGTAGTEEGQKI-VLQNG------AH-EVFNHREVNYIDKIKKY 92 (174)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTT-------CEEEEEESSHHHHHH-HHHTT------CS-EEEETTSTTHHHHHHHH
T ss_pred CCCEEEEEeccccccccccccccccC-------ccccccccccccccc-ccccC------cc-cccccccccHHHHhhhh
Confidence 33479999999999999999877776 789888899888754 44564 12 2347766554444322
Q ss_pred ----ccCeeEeccCC
Q 014694 88 ----QTKLLLNCVGP 98 (420)
Q Consensus 88 ----~~dvVIn~aGp 98 (420)
+.|+||+|+|.
T Consensus 93 t~~~g~d~v~d~~g~ 107 (174)
T d1yb5a2 93 VGEKGIDIIIEMLAN 107 (174)
T ss_dssp HCTTCEEEEEESCHH
T ss_pred hccCCceEEeecccH
Confidence 47999999874
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=96.86 E-value=0.0014 Score=55.57 Aligned_cols=75 Identities=17% Similarity=0.149 Sum_probs=53.0
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
..-.|+|+||+|-+|...++.+...+ .+|+++.+++++++.+ ++++ .+. ..|..+...-...-.+
T Consensus 27 ~g~~VlI~ga~G~vG~~aiqlak~~G-------~~vi~~~~~~~~~~~~-~~lG------a~~-~i~~~~~~~~~~~~~g 91 (171)
T d1iz0a2 27 PGEKVLVQAAAGALGTAAVQVARAMG-------LRVLAAASRPEKLALP-LALG------AEE-AATYAEVPERAKAWGG 91 (171)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTT-------CEEEEEESSGGGSHHH-HHTT------CSE-EEEGGGHHHHHHHTTS
T ss_pred CCCEEEEEeccccchhhhhhhhcccc-------cccccccccccccccc-cccc------cce-eeehhhhhhhhhcccc
Confidence 33469999999999999999877776 7899899998888544 4554 122 2355443332233457
Q ss_pred cCeeEeccCC
Q 014694 89 TKLLLNCVGP 98 (420)
Q Consensus 89 ~dvVIn~aGp 98 (420)
+|+||+|+|+
T Consensus 92 ~D~v~d~~G~ 101 (171)
T d1iz0a2 92 LDLVLEVRGK 101 (171)
T ss_dssp EEEEEECSCT
T ss_pred ccccccccch
Confidence 8999999985
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.86 E-value=0.0042 Score=52.16 Aligned_cols=84 Identities=18% Similarity=0.194 Sum_probs=55.4
Q ss_pred CCCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHH
Q 014694 6 QIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHR 84 (420)
Q Consensus 6 ~~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~-~~~~~~~~i~~D~~d~~sl~~ 84 (420)
++.| .+|.|+|| |.+|..++..|+..+-. -++.+.++++++++....++.. ........+... .|.+
T Consensus 16 ~~~~-~KI~IIGa-G~VG~~~A~~l~~~~l~-----~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~-~d~~---- 83 (159)
T d2ldxa1 16 KLSR-CKITVVGV-GDVGMACAISILLKGLA-----DELALVDADTDKLRGEALDLQHGSLFLSTPKIVFG-KDYN---- 83 (159)
T ss_dssp CCCC-CEEEEECC-SHHHHHHHHHHHTTTSC-----SEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEE-SSGG----
T ss_pred cCCC-CeEEEECC-CHHHHHHHHHHHhcCCC-----CEEEEEeCCchhhhccHHHHhCcchhcCCCeEEec-cchh----
Confidence 3444 58999996 99999999988887631 4799999999887766555532 001112222221 2332
Q ss_pred HHhccCeeEeccCCCCC
Q 014694 85 LCSQTKLLLNCVGPYRL 101 (420)
Q Consensus 85 ~~~~~dvVIn~aGp~~~ 101 (420)
.++++|+||.++|....
T Consensus 84 ~~~~adivvitag~~~~ 100 (159)
T d2ldxa1 84 VSANSKLVIITAGARMV 100 (159)
T ss_dssp GGTTEEEEEECCSCCCC
T ss_pred hhccccEEEEecccccC
Confidence 35789999999996443
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=96.85 E-value=0.00081 Score=57.29 Aligned_cols=73 Identities=23% Similarity=0.208 Sum_probs=52.4
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
..+|+|+|+ |.+++.++..|.+.+ .++.++.|+.++.+.+.+.+.. ...+...+..+. ....+
T Consensus 18 ~k~vlIlGa-GGaarai~~aL~~~~-------~~i~I~nR~~~~a~~l~~~~~~----~~~~~~~~~~~~-----~~~~~ 80 (171)
T d1p77a1 18 NQHVLILGA-GGATKGVLLPLLQAQ-------QNIVLANRTFSKTKELAERFQP----YGNIQAVSMDSI-----PLQTY 80 (171)
T ss_dssp TCEEEEECC-SHHHHTTHHHHHHTT-------CEEEEEESSHHHHHHHHHHHGG----GSCEEEEEGGGC-----CCSCC
T ss_pred CCEEEEECC-cHHHHHHHHHHcccC-------ceeeeccchHHHHHHHHHHHhh----ccccchhhhccc-----ccccc
Confidence 447999987 779999999998754 6899999999999999888741 223333332111 14578
Q ss_pred CeeEeccCCC
Q 014694 90 KLLLNCVGPY 99 (420)
Q Consensus 90 dvVIn~aGp~ 99 (420)
|+||||....
T Consensus 81 diiIN~tp~g 90 (171)
T d1p77a1 81 DLVINATSAG 90 (171)
T ss_dssp SEEEECCCC-
T ss_pred ceeeeccccc
Confidence 9999998643
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=96.79 E-value=0.0014 Score=54.61 Aligned_cols=68 Identities=19% Similarity=0.289 Sum_probs=53.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
|+|.++|+ |-+|+.+++.|.+.+ .++.+.+|+.++.+++.++++. .+ .. +.+++++++|
T Consensus 1 MkIg~IG~-G~mG~al~~~l~~~~-------~~i~v~~r~~~~~~~l~~~~g~------~~----~~---~~~~~~~~~d 59 (152)
T d2ahra2 1 MKIGIIGV-GKMASAIIKGLKQTP-------HELIISGSSLERSKEIAEQLAL------PY----AM---SHQDLIDQVD 59 (152)
T ss_dssp CEEEEECC-SHHHHHHHHHHTTSS-------CEEEEECSSHHHHHHHHHHHTC------CB----CS---SHHHHHHTCS
T ss_pred CEEEEEec-cHHHHHHHHHHHhCC-------CeEEEEcChHHhHHhhccccce------ee----ec---hhhhhhhccc
Confidence 67889975 999999999998775 7899999999999888877641 11 11 3566678999
Q ss_pred eeEeccCCC
Q 014694 91 LLLNCVGPY 99 (420)
Q Consensus 91 vVIn~aGp~ 99 (420)
+||-|+-|.
T Consensus 60 vIilavkp~ 68 (152)
T d2ahra2 60 LVILGIKPQ 68 (152)
T ss_dssp EEEECSCGG
T ss_pred eeeeecchH
Confidence 999999774
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=96.76 E-value=0.0024 Score=53.97 Aligned_cols=73 Identities=16% Similarity=0.114 Sum_probs=54.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH---h
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC---S 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~---~ 87 (420)
-.|+|+||+|.+|..+++.....+ .+|++.+++++|++.+ .+++. . ...|..+++-.+++. .
T Consensus 30 ~~Vlv~ga~g~vG~~~iqlak~~G-------a~Vi~~~~s~~k~~~~-~~lGa------~-~vi~~~~~d~~~~v~~~t~ 94 (179)
T d1qora2 30 EQFLFHAAAGGVGLIACQWAKALG-------AKLIGTVGTAQKAQSA-LKAGA------W-QVINYREEDLVERLKEITG 94 (179)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHHT-------CEEEEEESSHHHHHHH-HHHTC------S-EEEETTTSCHHHHHHHHTT
T ss_pred CEEEEEccccccchHHHHHHHHhC-------CeEeecccchHHHHHH-HhcCC------e-EEEECCCCCHHHHHHHHhC
Confidence 479999999999999999887777 7999999999998654 45641 2 234776654444432 2
Q ss_pred --ccCeeEeccCC
Q 014694 88 --QTKLLLNCVGP 98 (420)
Q Consensus 88 --~~dvVIn~aGp 98 (420)
+.|+|++++|.
T Consensus 95 g~g~d~v~d~~g~ 107 (179)
T d1qora2 95 GKKVRVVYDSVGR 107 (179)
T ss_dssp TCCEEEEEECSCG
T ss_pred CCCeEEEEeCccH
Confidence 46899999985
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.71 E-value=0.0025 Score=54.02 Aligned_cols=74 Identities=15% Similarity=0.105 Sum_probs=53.1
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH---
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC--- 86 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~--- 86 (420)
.-.|+|+||+|.+|..+++.+...+ .+++++.++.++++. +++++ .. ...|..+++-.+++.
T Consensus 26 g~~VlI~ga~g~vG~~~iqla~~~g-------~~vi~~~~~~~~~~~-l~~~G------a~-~vi~~~~~~~~~~v~~~t 90 (183)
T d1pqwa_ 26 GERVLIHSATGGVGMAAVSIAKMIG-------ARIYTTAGSDAKREM-LSRLG------VE-YVGDSRSVDFADEILELT 90 (183)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHHT-------CEEEEEESSHHHHHH-HHTTC------CS-EEEETTCSTHHHHHHHHT
T ss_pred CCEEEEECCCCCcccccchhhcccc-------ccceeeecccccccc-ccccc------cc-ccccCCccCHHHHHHHHh
Confidence 3479999999999999999887777 788888899888754 44453 22 234666654333332
Q ss_pred --hccCeeEeccCC
Q 014694 87 --SQTKLLLNCVGP 98 (420)
Q Consensus 87 --~~~dvVIn~aGp 98 (420)
.++|+||+|+|.
T Consensus 91 ~~~g~d~v~d~~g~ 104 (183)
T d1pqwa_ 91 DGYGVDVVLNSLAG 104 (183)
T ss_dssp TTCCEEEEEECCCT
T ss_pred CCCCEEEEEecccc
Confidence 258999999984
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=96.68 E-value=0.0025 Score=54.33 Aligned_cols=74 Identities=14% Similarity=0.008 Sum_probs=51.4
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHH---HHHHHH
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPP---SLHRLC 86 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~---sl~~~~ 86 (420)
.-.|+|+||+|.+|..+++.....+ .+|+...|++++++.+ ++++ ...+ +|..+++ .+.+..
T Consensus 30 G~~VlV~ga~ggvG~~aiqlak~~G-------a~vi~~~~~~~~~~~~-~~~G------a~~v-i~~~~~~~~~~~~~~~ 94 (182)
T d1v3va2 30 GETVLVSAAAGAVGSVVGQIAKLKG-------CKVVGAAGSDEKIAYL-KQIG------FDAA-FNYKTVNSLEEALKKA 94 (182)
T ss_dssp SCEEEESSTTSHHHHHHHHHHHHTT-------CEEEEEESSHHHHHHH-HHTT------CSEE-EETTSCSCHHHHHHHH
T ss_pred CCEEEEEeCCCchhHHHHHHHHccC-------CEEEEeCCCHHHHHHH-Hhhh------hhhh-cccccccHHHHHHHHh
Confidence 3479999999999999998877776 7999999999887554 4443 1222 3444443 333332
Q ss_pred h--ccCeeEeccCC
Q 014694 87 S--QTKLLLNCVGP 98 (420)
Q Consensus 87 ~--~~dvVIn~aGp 98 (420)
. ++|+||+|+|.
T Consensus 95 ~~~Gvd~v~D~vG~ 108 (182)
T d1v3va2 95 SPDGYDCYFDNVGG 108 (182)
T ss_dssp CTTCEEEEEESSCH
T ss_pred hcCCCceeEEecCc
Confidence 2 58999999873
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=96.64 E-value=0.0068 Score=51.27 Aligned_cols=107 Identities=13% Similarity=0.063 Sum_probs=69.4
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
-+|-|+|- |.+|..+++.|++.+ ++|.+.+|++++.+++.++-. ...... .....+++...+..+|
T Consensus 3 ~nIg~IGl-G~MG~~mA~~L~~~G-------~~V~v~dr~~~~~~~l~~~~~----~~~~~~--~a~~~~~~~~~~~~~~ 68 (176)
T d2pgda2 3 ADIALIGL-AVMGQNLILNMNDHG-------FVVCAFNRTVSKVDDFLANEA----KGTKVL--GAHSLEEMVSKLKKPR 68 (176)
T ss_dssp BSEEEECC-SHHHHHHHHHHHHTT-------CCEEEECSSTHHHHHHHHTTT----TTSSCE--ECSSHHHHHHHBCSSC
T ss_pred CcEEEEeE-hHHHHHHHHHHHHCC-------CeEEEEcCCHHHHHHHHHhcc----cccccc--chhhhhhhhhhhcccc
Confidence 36888875 999999999999998 899999999999988876432 111111 2446677788888888
Q ss_pred eeEeccCCCCCCcHHHHHHHH---HcCCcEEecC-CcHHHHHHHHH
Q 014694 91 LLLNCVGPYRLHGDPVAAACV---HSGCDYLDIS-GEPEFMERMEA 132 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~Ac~---~~g~~yvdis-ge~~~~~~~~~ 132 (420)
++|.++-.... -..+.+... ..|..+||.| ..+...+++.+
T Consensus 69 ~ii~~~~~~~~-v~~v~~~l~~~~~~g~iiid~sT~~~~~~~~~~~ 113 (176)
T d2pgda2 69 RIILLVKAGQA-VDNFIEKLVPLLDIGDIIIDGGNSEYRDTMRRCR 113 (176)
T ss_dssp EEEECSCTTHH-HHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHH
T ss_pred eEEEecCchHH-HHHHHHHHHhccccCcEEEecCcchhHHHHHHHH
Confidence 88877643211 022222222 2345577765 45555555544
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=96.63 E-value=0.0036 Score=52.44 Aligned_cols=74 Identities=12% Similarity=0.139 Sum_probs=53.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
-+|+|+|++|.+|..+++.+...+. .+|++.++++++++. +++++ .+ ...|..+.+..++..+
T Consensus 29 ~~vlV~G~~G~vG~~~~~~~~~~g~------~~V~~~~~~~~~~~~-~~~~G------a~-~~i~~~~~~~~~~~~~~~~ 94 (170)
T d1jvba2 29 KTLLVVGAGGGLGTMAVQIAKAVSG------ATIIGVDVREEAVEA-AKRAG------AD-YVINASMQDPLAEIRRITE 94 (170)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTC------CEEEEEESSHHHHHH-HHHHT------CS-EEEETTTSCHHHHHHHHTT
T ss_pred CEEEEEeccccceeeeeeccccccc------ccccccccchhhHHH-HHHcC------Cc-eeeccCCcCHHHHHHHHhh
Confidence 4699999999999999999888772 589999999998854 45564 12 2345555444444443
Q ss_pred --ccCeeEeccCC
Q 014694 88 --QTKLLLNCVGP 98 (420)
Q Consensus 88 --~~dvVIn~aGp 98 (420)
..|+||.|+|.
T Consensus 95 ~~~~d~vid~~g~ 107 (170)
T d1jvba2 95 SKGVDAVIDLNNS 107 (170)
T ss_dssp TSCEEEEEESCCC
T ss_pred cccchhhhccccc
Confidence 47899999873
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=96.60 E-value=0.011 Score=48.88 Aligned_cols=110 Identities=7% Similarity=0.031 Sum_probs=69.2
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC---CCCCCccEEEEeCCCHHHHHHHH
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP---SHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~---~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
+.+|.|+|+ |.+|..++..|..++ ..++.+.++++++.+....++.. ....+..+...+ +. +.+
T Consensus 3 ~~KI~IIGa-G~VG~~~a~~l~~~~------l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~----~~~ 69 (150)
T d1t2da1 3 KAKIVLVGS-GMIGGVMATLIVQKN------LGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TY----DDL 69 (150)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTT------CCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CG----GGG
T ss_pred CCeEEEECC-CHHHHHHHHHHHhCC------CCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--cc----ccc
Confidence 358999996 999999997666654 15799999999887766555532 011233344332 32 335
Q ss_pred hccCeeEeccCCCCCCc-------------------HHHHHHHHHcCC--cEEecCCcHHHHHHHHH
Q 014694 87 SQTKLLLNCVGPYRLHG-------------------DPVAAACVHSGC--DYLDISGEPEFMERMEA 132 (420)
Q Consensus 87 ~~~dvVIn~aGp~~~~~-------------------~~vv~Ac~~~g~--~yvdisge~~~~~~~~~ 132 (420)
+++|+||.++|--...+ ..+++.+.+.+- .++.+|-....+-.+..
T Consensus 70 ~~advvvitag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~p~aivivvtNPvD~~t~~~~ 136 (150)
T d1t2da1 70 AGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTNPVDVMVQLLH 136 (150)
T ss_dssp TTCSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSSHHHHHHHHH
T ss_pred CCCcEEEEecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCchHHHHHHHH
Confidence 78999999999433211 344455555553 46777766666555443
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=96.59 E-value=0.012 Score=48.41 Aligned_cols=77 Identities=14% Similarity=0.097 Sum_probs=51.8
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~-~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
+|.|+|| |++|..++-.|+.++-. .++.+.++++++++....++.. ........... ..|.+ .++++|
T Consensus 3 KI~IIGa-G~VG~~~a~~l~~~~~~-----~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~-~~d~~----~l~~ad 71 (146)
T d1hyha1 3 KIGIIGL-GNVGAAVAHGLIAQGVA-----DDYVFIDANEAKVKADQIDFQDAMANLEAHGNIV-INDWA----ALADAD 71 (146)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHTCC-----SEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEE-ESCGG----GGTTCS
T ss_pred eEEEECc-CHHHHHHHHHHHhcCCC-----ceEEEEecccchhhhHHHhhhccccccCCcccee-ccCHH----Hhcccc
Confidence 7999996 99999999999988621 4799999999987665554431 00111221122 13433 358899
Q ss_pred eeEeccCCC
Q 014694 91 LLLNCVGPY 99 (420)
Q Consensus 91 vVIn~aGp~ 99 (420)
+||-++|..
T Consensus 72 iVVitaG~~ 80 (146)
T d1hyha1 72 VVISTLGNI 80 (146)
T ss_dssp EEEECCSCG
T ss_pred EEEEecccc
Confidence 999999954
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=96.55 E-value=0.0036 Score=52.55 Aligned_cols=73 Identities=12% Similarity=0.093 Sum_probs=55.8
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
.-+|+|+|+ |.+|...++.+...+ .++++++++.++++ ++++++. . ...|..+.+......++.
T Consensus 31 G~~VlI~Ga-G~vG~~a~qlak~~G-------a~~i~~~~~~~~~~-~a~~lGa------d-~~i~~~~~~~~~~~~~~~ 94 (168)
T d1uufa2 31 GKKVGVVGI-GGLGHMGIKLAHAMG-------AHVVAFTTSEAKRE-AAKALGA------D-EVVNSRNADEMAAHLKSF 94 (168)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTT-------CEEEEEESSGGGHH-HHHHHTC------S-EEEETTCHHHHHTTTTCE
T ss_pred CCEEEEecc-chHHHHHHHHhhccc-------ccchhhccchhHHH-HHhccCC------c-EEEECchhhHHHHhcCCC
Confidence 346999986 889999998877766 67778899988874 5566752 2 235777877777777789
Q ss_pred CeeEeccCC
Q 014694 90 KLLLNCVGP 98 (420)
Q Consensus 90 dvVIn~aGp 98 (420)
|++|.|+|-
T Consensus 95 D~vid~~g~ 103 (168)
T d1uufa2 95 DFILNTVAA 103 (168)
T ss_dssp EEEEECCSS
T ss_pred ceeeeeeec
Confidence 999999984
|
| >d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative semialdehyde dehydrogenase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=96.51 E-value=0.00036 Score=60.26 Aligned_cols=103 Identities=14% Similarity=0.112 Sum_probs=56.8
Q ss_pred CCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEe-cCh--hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHH
Q 014694 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAG-RNP--TRVKQALQWASPSHSLSIPILTADTTDPPSLH 83 (420)
Q Consensus 7 ~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iag-Rs~--~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~ 83 (420)
+.++++|-|+|||||+|+.+++.|.+|- .+++..+. ++. .++.+....+. ... +.......+
T Consensus 2 s~~kikVaIlGATGyvG~elirLL~~HP------~~ei~~l~S~~~aG~~~~~~~~~~~---~~~------~~~~~~~~~ 66 (183)
T d2cvoa1 2 SGEEVRIAVLGASGYTGAEIVRLLANHP------QFRIKVMTADRKAGEQFGSVFPHLI---TQD------LPNLVAVKD 66 (183)
T ss_dssp CSSCEEEEEESCSSHHHHHHHHHHTTCS------SEEEEEEECSTTTTSCHHHHCGGGT---TSC------CCCCBCGGG
T ss_pred CCCccEEEEECcccHHHHHHHHHHHhCC------CceEEEEeccccCCCcccccccccc---ccc------cccchhhhh
Confidence 4578899999999999999999999874 26665444 322 22332222221 011 111111122
Q ss_pred HHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHHH
Q 014694 84 RLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFM 127 (420)
Q Consensus 84 ~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~~ 127 (420)
..++++|+|+.+...- ....++... ......+|.+++..+.
T Consensus 67 ~~~~~~Dvvf~alp~~--~s~~~~~~l-~~~~~~v~~~~~~~~~ 107 (183)
T d2cvoa1 67 ADFSNVDAVFCCLPHG--TTQEIIKGL-PQELKIVDLSADFRLR 107 (183)
T ss_dssp CCGGGCSEEEECCSSS--HHHHHHHTS-CSSCEEEECSSTTTCS
T ss_pred hhhcccceeeeccccc--hHHHHHHHH-HhcCcccccchhhhcc
Confidence 3356799999887431 123444332 2334566666655443
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=96.49 E-value=0.0029 Score=59.24 Aligned_cols=40 Identities=15% Similarity=-0.028 Sum_probs=32.9
Q ss_pred eEEEEc--CCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHH
Q 014694 12 DVIILG--ASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQAL 58 (420)
Q Consensus 12 ~IvV~G--ATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~ 58 (420)
-.|||| ++..||+.+++.|+++| .+|++.+|+........
T Consensus 4 VAlITGaa~s~GIG~aiA~~la~~G-------A~V~i~~~~~~~~~~~~ 45 (329)
T d1uh5a_ 4 ICFIAGIGDTNGYGWGIAKELSKRN-------VKIIFGIWPPVYNIFMK 45 (329)
T ss_dssp EEEEECCSSSSSHHHHHHHHHHHTT-------CEEEEEECGGGHHHHHH
T ss_pred EEEEeCCCCCChHHHHHHHHHHHcC-------CEEEEEeCchhhhhhhH
Confidence 579999 45689999999999998 89999999876554443
|
| >d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=96.46 E-value=0.00029 Score=60.36 Aligned_cols=43 Identities=21% Similarity=0.220 Sum_probs=35.0
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHh
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWA 61 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l 61 (420)
..+|+|+|+ |.+++.++..|.+. -++.|+.|+.++.+++.+++
T Consensus 18 ~k~vlIlGa-GG~arai~~aL~~~--------~~i~I~nR~~~ka~~l~~~~ 60 (177)
T d1nvta1 18 DKNIVIYGA-GGAARAVAFELAKD--------NNIIIANRTVEKAEALAKEI 60 (177)
T ss_dssp SCEEEEECC-SHHHHHHHHHHTSS--------SEEEEECSSHHHHHHHHHHH
T ss_pred CCEEEEECC-cHHHHHHHHHHccc--------cceeeehhhhhHHHHHHHHH
Confidence 457999987 77999999888543 37999999999998887655
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.43 E-value=0.0028 Score=53.25 Aligned_cols=74 Identities=12% Similarity=0.036 Sum_probs=52.4
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCC-CHHHHHHHHhc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTT-DPPSLHRLCSQ 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~-d~~sl~~~~~~ 88 (420)
.-+|+|+|+ |.+|...++.+...+ .+|++++++++|++. .++++ ...+ .|.. +.+..++....
T Consensus 28 g~~vlI~Ga-G~vG~~a~q~ak~~G-------~~vi~~~~~~~k~~~-a~~lG------a~~~-i~~~~~~~~~~~~~~~ 91 (168)
T d1piwa2 28 GKKVGIVGL-GGIGSMGTLISKAMG-------AETYVISRSSRKRED-AMKMG------ADHY-IATLEEGDWGEKYFDT 91 (168)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHHT-------CEEEEEESSSTTHHH-HHHHT------CSEE-EEGGGTSCHHHHSCSC
T ss_pred CCEEEEECC-CCcchhHHHHhhhcc-------ccccccccchhHHHH-hhccC------CcEE-eeccchHHHHHhhhcc
Confidence 347999987 999999998877777 789999999999864 45564 1222 2332 33445555667
Q ss_pred cCeeEeccCCC
Q 014694 89 TKLLLNCVGPY 99 (420)
Q Consensus 89 ~dvVIn~aGp~ 99 (420)
.|++|.|+|..
T Consensus 92 ~d~vi~~~~~~ 102 (168)
T d1piwa2 92 FDLIVVCASSL 102 (168)
T ss_dssp EEEEEECCSCS
T ss_pred cceEEEEecCC
Confidence 89999998743
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=96.39 E-value=0.0017 Score=54.30 Aligned_cols=65 Identities=15% Similarity=0.288 Sum_probs=47.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
|+|.|+|+ |.+|..+++.|.+.+ ++|.+.+|+++.+++..+ .+ .+.. ..| +. +.++++|
T Consensus 1 MkI~iIG~-G~mG~~lA~~l~~~g-------~~V~~~d~~~~~~~~a~~-~~-----~~~~-~~~--~~----~~~~~~D 59 (165)
T d2f1ka2 1 MKIGVVGL-GLIGASLAGDLRRRG-------HYLIGVSRQQSTCEKAVE-RQ-----LVDE-AGQ--DL----SLLQTAK 59 (165)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT-------CEEEEECSCHHHHHHHHH-TT-----SCSE-EES--CG----GGGTTCS
T ss_pred CEEEEEee-cHHHHHHHHHHHHCC-------CEEEEEECCchHHHHHHH-hh-----ccce-eee--ec----ccccccc
Confidence 68999976 999999999999887 899999999988876554 21 1111 111 21 3567899
Q ss_pred eeEecc
Q 014694 91 LLLNCV 96 (420)
Q Consensus 91 vVIn~a 96 (420)
+||-++
T Consensus 60 iIilav 65 (165)
T d2f1ka2 60 IIFLCT 65 (165)
T ss_dssp EEEECS
T ss_pred cccccC
Confidence 998776
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=96.39 E-value=0.0054 Score=50.59 Aligned_cols=67 Identities=19% Similarity=0.250 Sum_probs=51.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
|+|.++|+ |.+|+.+++.|++.++ +++.+.+|++++++++.++.+ +. ..+ |.+. ++++|
T Consensus 1 MkI~fIG~-G~MG~ai~~~l~~~~~------~~i~v~~r~~~~~~~l~~~~~------~~--~~~--~~~~----v~~~D 59 (152)
T d1yqga2 1 MNVYFLGG-GNMAAAVAGGLVKQGG------YRIYIANRGAEKRERLEKELG------VE--TSA--TLPE----LHSDD 59 (152)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHCS------CEEEEECSSHHHHHHHHHHTC------CE--EES--SCCC----CCTTS
T ss_pred CEEEEEcC-cHHHHHHHHHHHHCCC------CcEEEEeCChhHHHHhhhhcc------cc--ccc--cccc----ccccc
Confidence 68999987 9999999999998873 789999999999988877653 22 122 1121 45689
Q ss_pred eeEeccCC
Q 014694 91 LLLNCVGP 98 (420)
Q Consensus 91 vVIn~aGp 98 (420)
+||-++-|
T Consensus 60 iv~lavkP 67 (152)
T d1yqga2 60 VLILAVKP 67 (152)
T ss_dssp EEEECSCH
T ss_pred eEEEecCH
Confidence 99988766
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.39 E-value=0.01 Score=49.65 Aligned_cols=74 Identities=18% Similarity=0.315 Sum_probs=51.8
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh----
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~---- 87 (420)
.|+|+|+ |.+|...++.+...+. .+|++.++++++++ +.++++. + .++..+-.+.....+.+.
T Consensus 29 ~VlI~G~-G~iG~~~~~~a~~~G~------~~Vi~~d~~~~rl~-~a~~~Ga----~-~~~~~~~~~~~~~~~~~~~~~g 95 (171)
T d1pl8a2 29 KVLVCGA-GPIGMVTLLVAKAMGA------AQVVVTDLSATRLS-KAKEIGA----D-LVLQISKESPQEIARKVEGQLG 95 (171)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTC------SEEEEEESCHHHHH-HHHHTTC----S-EEEECSSCCHHHHHHHHHHHHT
T ss_pred EEEEECC-CccHHHHHHHHHHcCC------ceEEeccCCHHHHH-HHHHhCC----c-ccccccccccccccccccccCC
Confidence 6888887 9999999988877772 47999999999995 4556641 1 223333345554544443
Q ss_pred -ccCeeEeccCC
Q 014694 88 -QTKLLLNCVGP 98 (420)
Q Consensus 88 -~~dvVIn~aGp 98 (420)
++|+||.|+|-
T Consensus 96 ~g~Dvvid~~G~ 107 (171)
T d1pl8a2 96 CKPEVTIECTGA 107 (171)
T ss_dssp SCCSEEEECSCC
T ss_pred CCceEEEeccCC
Confidence 57999999984
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=96.36 E-value=0.0066 Score=51.45 Aligned_cols=73 Identities=22% Similarity=0.302 Sum_probs=49.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCH--HHHHH-HHh
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDP--PSLHR-LCS 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~--~sl~~-~~~ 87 (420)
-+|+|+|| |.+|..+++.+...+. .+|+++++++++++ ++++++. . ...|..+. .+..+ +.+
T Consensus 30 ~~VlV~Ga-G~iG~~~~~~ak~~Ga------~~Vi~~~~~~~~~~-~a~~lGa------~-~vi~~~~~~~~~~~~~i~~ 94 (182)
T d1vj0a2 30 KTVVIQGA-GPLGLFGVVIARSLGA------ENVIVIAGSPNRLK-LAEEIGA------D-LTLNRRETSVEERRKAIMD 94 (182)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTB------SEEEEEESCHHHHH-HHHHTTC------S-EEEETTTSCHHHHHHHHHH
T ss_pred CEEEEECC-Cccchhheeccccccc------cccccccccccccc-ccccccc------e-EEEeccccchHHHHHHHHH
Confidence 47999997 8999999998877771 37999999999985 4566641 2 22344432 22222 221
Q ss_pred -----ccCeeEeccCC
Q 014694 88 -----QTKLLLNCVGP 98 (420)
Q Consensus 88 -----~~dvVIn~aGp 98 (420)
++|+||.|+|-
T Consensus 95 ~~~~~g~Dvvid~vG~ 110 (182)
T d1vj0a2 95 ITHGRGADFILEATGD 110 (182)
T ss_dssp HTTTSCEEEEEECSSC
T ss_pred hhCCCCceEEeecCCc
Confidence 47999999984
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=96.35 E-value=0.0088 Score=50.39 Aligned_cols=75 Identities=11% Similarity=0.082 Sum_probs=50.9
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
..-+|+|+|+ |.+|...++.+...+. ..|++++++++|++. +++++. .. ..|..+++..+++.+
T Consensus 28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~------~~v~~~~~~~~k~~~-a~~~Ga-----~~--~i~~~~~~~~~~i~~~ 92 (174)
T d1f8fa2 28 PASSFVTWGA-GAVGLSALLAAKVCGA------SIIIAVDIVESRLEL-AKQLGA-----TH--VINSKTQDPVAAIKEI 92 (174)
T ss_dssp TTCEEEEESC-SHHHHHHHHHHHHHTC------SEEEEEESCHHHHHH-HHHHTC-----SE--EEETTTSCHHHHHHHH
T ss_pred CCCEEEEeCC-CHHHhhhhhccccccc------ceeeeeccHHHHHHH-HHHcCC-----eE--EEeCCCcCHHHHHHHH
Confidence 3346999987 9999999988877772 567888899998854 456641 12 245555443333322
Q ss_pred ---ccCeeEeccCC
Q 014694 88 ---QTKLLLNCVGP 98 (420)
Q Consensus 88 ---~~dvVIn~aGp 98 (420)
+.|+||.|+|.
T Consensus 93 t~gg~D~vid~~G~ 106 (174)
T d1f8fa2 93 TDGGVNFALESTGS 106 (174)
T ss_dssp TTSCEEEEEECSCC
T ss_pred cCCCCcEEEEcCCc
Confidence 37899999873
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=96.34 E-value=0.0049 Score=51.58 Aligned_cols=73 Identities=19% Similarity=0.302 Sum_probs=49.5
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeC--CCHHHHHHHHh--
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADT--TDPPSLHRLCS-- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~--~d~~sl~~~~~-- 87 (420)
+|+|+| +|.+|...++.+...+ .+|++.+++++|++. +++++. + ..+..|- .+..++.+.++
T Consensus 29 ~vlV~G-~G~vG~~~~~~ak~~G-------a~vi~v~~~~~r~~~-a~~~ga----~-~~~~~~~~~~~~~~~~~~~~~~ 94 (170)
T d1e3ja2 29 TVLVIG-AGPIGLVSVLAAKAYG-------AFVVCTARSPRRLEV-AKNCGA----D-VTLVVDPAKEEESSIIERIRSA 94 (170)
T ss_dssp EEEEEC-CSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHH-HHHTTC----S-EEEECCTTTSCHHHHHHHHHHH
T ss_pred EEEEEc-ccccchhhHhhHhhhc-------ccccccchHHHHHHH-HHHcCC----c-EEEeccccccccchhhhhhhcc
Confidence 688987 5899999998877666 789999999999854 444531 1 1222232 23334444433
Q ss_pred ---ccCeeEeccCC
Q 014694 88 ---QTKLLLNCVGP 98 (420)
Q Consensus 88 ---~~dvVIn~aGp 98 (420)
++|+||.|+|.
T Consensus 95 ~g~g~D~vid~~g~ 108 (170)
T d1e3ja2 95 IGDLPNVTIDCSGN 108 (170)
T ss_dssp SSSCCSEEEECSCC
T ss_pred cccCCceeeecCCC
Confidence 48999999984
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=96.28 E-value=0.017 Score=47.19 Aligned_cols=78 Identities=12% Similarity=0.076 Sum_probs=52.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCC---CCCCccEEEEeCCCHHHHHHHHh
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS---HSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~---~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
.+|.|+|+ |.+|..++-.|+..+- .++.+.+.++++.+....++... ......+... .|.+ .++
T Consensus 2 ~KI~IIGa-G~VG~~~A~~l~~~~l------~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~--~d~~----~~~ 68 (142)
T d1uxja1 2 KKISIIGA-GFVGSTTAHWLAAKEL------GDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NNYA----DTA 68 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTC------SEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGG----GGT
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCc------ceEEEEeeccccchhHHHHhhccccccCCCCEEEec--CcHH----Hhc
Confidence 38999997 9999999998887752 57999999988876665555320 1112333322 2323 257
Q ss_pred ccCeeEeccCCCCC
Q 014694 88 QTKLLLNCVGPYRL 101 (420)
Q Consensus 88 ~~dvVIn~aGp~~~ 101 (420)
++|+||-++|....
T Consensus 69 ~advvvitag~~~~ 82 (142)
T d1uxja1 69 NSDVIVVTSGAPRK 82 (142)
T ss_dssp TCSEEEECCSCC--
T ss_pred CCCEEEEeeeccCC
Confidence 89999999996543
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.24 E-value=0.0035 Score=53.68 Aligned_cols=74 Identities=11% Similarity=0.027 Sum_probs=50.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
-.|+|.||+|.+|...++.....+. ..|+.+.+++++...+..+++. . ...|..+++..+.+-+
T Consensus 32 etVLI~gaaGgVG~~aiQlak~~Ga------~~vi~~~~~~e~~~~l~~~~ga------d-~vi~~~~~~~~~~~~~~~~ 98 (187)
T d1vj1a2 32 QTMVVSGAAGACGSLAGQIGHLLGC------SRVVGICGTQEKCLFLTSELGF------D-AAVNYKTGNVAEQLREACP 98 (187)
T ss_dssp CEEEESSTTSTTGGGHHHHHHHTTC------SEEEEEESSHHHHHHHHHHSCC------S-EEEETTSSCHHHHHHHHCT
T ss_pred CEEEEECCCchhhHHHHHHHHHcCC------cceecccchHHHHhhhhhcccc------e-EEeeccchhHHHHHHHHhc
Confidence 3699999999999999998766661 3466667777777777777752 1 3446655433222222
Q ss_pred -ccCeeEeccC
Q 014694 88 -QTKLLLNCVG 97 (420)
Q Consensus 88 -~~dvVIn~aG 97 (420)
++|+||.++|
T Consensus 99 ~GvDvv~D~vG 109 (187)
T d1vj1a2 99 GGVDVYFDNVG 109 (187)
T ss_dssp TCEEEEEESSC
T ss_pred cCceEEEecCC
Confidence 4788888887
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=96.23 E-value=0.011 Score=49.94 Aligned_cols=77 Identities=14% Similarity=0.090 Sum_probs=53.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
|+|-|+| .|.+|..++++|++.+ ++|.+.+|++++.+++.++-.. ......... ..+.+.+...+...+
T Consensus 2 MkIGvIG-lG~MG~~ma~~L~~~G-------~~V~~~dr~~~~~~~l~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~ 70 (178)
T d1pgja2 2 MDVGVVG-LGVMGANLALNIAEKG-------FKVAVFNRTYSKSEEFMKANAS--APFAGNLKA-FETMEAFAASLKKPR 70 (178)
T ss_dssp BSEEEEC-CSHHHHHHHHHHHHTT-------CCEEEECSSHHHHHHHHHHTTT--STTGGGEEE-CSCHHHHHHHBCSSC
T ss_pred CEEEEEe-ehHHHHHHHHHHHHCC-------CeEEEEECCHHHHHHHHHcCCc--cccccchhh-hhhhhHHHHhcccce
Confidence 6788887 5999999999999998 8999999999999988876531 111112222 334555666666666
Q ss_pred eeEeccCC
Q 014694 91 LLLNCVGP 98 (420)
Q Consensus 91 vVIn~aGp 98 (420)
.++-+..+
T Consensus 71 ~~~~~~~~ 78 (178)
T d1pgja2 71 KALILVQA 78 (178)
T ss_dssp EEEECCCC
T ss_pred EEEEeecC
Confidence 66555543
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.14 E-value=0.005 Score=52.44 Aligned_cols=79 Identities=18% Similarity=0.151 Sum_probs=52.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh--HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT--RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~--kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
|+|.|+|| |..|..++..|++++ .+|.+.+|..+ ..+.+.+. .........+...++.-.+++++++++
T Consensus 1 MkI~ViGa-G~~GtalA~~la~~g-------~~V~l~~r~~~~~~~~~i~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~ 71 (180)
T d1txga2 1 MIVSILGA-GAMGSALSVPLVDNG-------NEVRIWGTEFDTEILKSISAG-REHPRLGVKLNGVEIFWPEQLEKCLEN 71 (180)
T ss_dssp CEEEEESC-CHHHHHHHHHHHHHC-------CEEEEECCGGGHHHHHHHHTT-CCBTTTTBCCCSEEEECGGGHHHHHTT
T ss_pred CEEEEECC-CHHHHHHHHHHHHCC-------CEEEEEEecccHHHHHHHhhh-hhhhhhcchhccccccccccHHHHHhc
Confidence 78999997 999999999999987 78999999544 33333221 110001111111122335678899999
Q ss_pred cCeeEeccCC
Q 014694 89 TKLLLNCVGP 98 (420)
Q Consensus 89 ~dvVIn~aGp 98 (420)
+|+||.++-+
T Consensus 72 ad~Ii~avps 81 (180)
T d1txga2 72 AEVVLLGVST 81 (180)
T ss_dssp CSEEEECSCG
T ss_pred cchhhcccch
Confidence 9999998853
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=96.12 E-value=0.0052 Score=52.07 Aligned_cols=73 Identities=15% Similarity=0.160 Sum_probs=50.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHH---HHHHHHh
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPP---SLHRLCS 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~---sl~~~~~ 87 (420)
-+|+|+|+ |.+|...++.+...+. .+|++++++++|++ +.++++. . ..+|..+++ .+.++..
T Consensus 29 ~~VlI~Ga-G~vGl~~~q~ak~~Ga------~~Vi~~d~~~~r~~-~a~~lGa------~-~~i~~~~~~~~~~v~~~t~ 93 (174)
T d1jqba2 29 SSVVVIGI-GAVGLMGIAGAKLRGA------GRIIGVGSRPICVE-AAKFYGA------T-DILNYKNGHIEDQVMKLTN 93 (174)
T ss_dssp CCEEEECC-SHHHHHHHHHHHTTTC------SCEEEECCCHHHHH-HHHHHTC------S-EEECGGGSCHHHHHHHHTT
T ss_pred CEEEEEcC-Ccchhhhhhhhhcccc------cccccccchhhhHH-HHHhhCc------c-ccccccchhHHHHHHHHhh
Confidence 36999987 9999999888776662 47999999999985 4455651 1 223444433 3333332
Q ss_pred --ccCeeEeccCC
Q 014694 88 --QTKLLLNCVGP 98 (420)
Q Consensus 88 --~~dvVIn~aGp 98 (420)
++|+||.|+|-
T Consensus 94 g~G~D~vid~~g~ 106 (174)
T d1jqba2 94 GKGVDRVIMAGGG 106 (174)
T ss_dssp TSCEEEEEECSSC
T ss_pred ccCcceEEEccCC
Confidence 48999999984
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=96.10 E-value=0.038 Score=45.56 Aligned_cols=102 Identities=17% Similarity=0.139 Sum_probs=63.0
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceE--EEEecChhHHHHHHHHhCCCCCCCccEE-EEeCC---------
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSL--ALAGRNPTRVKQALQWASPSHSLSIPIL-TADTT--------- 77 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v--~iagRs~~kl~~~~~~l~~~~~~~~~~i-~~D~~--------- 77 (420)
+.+|.|+|+||-||+...+-+.++.+ . ++| ..+.+|-++|.+...++.. .++ ..|-.
T Consensus 2 pK~I~IlGsTGSIG~~tL~Vi~~~~d-~----f~v~~lsa~~N~~~L~~q~~ef~P------k~v~i~d~~~~~~l~~~~ 70 (150)
T d1r0ka2 2 PRTVTVLGATGSIGHSTLDLIERNLD-R----YQVIALTANRNVKDLADAAKRTNA------KRAVIADPSLYNDLKEAL 70 (150)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTGG-G----EEEEEEEESSCHHHHHHHHHHTTC------SEEEESCGGGHHHHHHHT
T ss_pred CcEEEEECCCcHHHHHHHHHHHcCCC-C----cEEEEEEeCCCHHHHHHHHHhhcc------ccceeccHHHHHHHHHHh
Confidence 46899999999999999988877531 1 555 3456788888888877742 111 11111
Q ss_pred ---------CHHHHHHHH-hccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcH
Q 014694 78 ---------DPPSLHRLC-SQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEP 124 (420)
Q Consensus 78 ---------d~~sl~~~~-~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~ 124 (420)
..+.+.++. ..+|+|++..-- ..|..-.-+++++|.+..-..=|.
T Consensus 71 ~~~~~~v~~g~~~l~~~~~~~~D~vv~Ai~G--~~GL~~tl~ai~~gk~iaLANKEs 125 (150)
T d1r0ka2 71 AGSSVEAAAGADALVEAAMMGADWTMAAIIG--CAGLKATLAAIRKGKTVALANKED 125 (150)
T ss_dssp TTCSSEEEESHHHHHHHHTSCCSEEEECCCS--GGGHHHHHHHHHTTSEEEECCSHC
T ss_pred hhcccccccCccchheecccccceeeeecCc--hhHHHHHHHHHhcCCEEEEecchh
Confidence 223333332 257888776532 335555566677777666555553
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=96.10 E-value=0.0017 Score=53.89 Aligned_cols=84 Identities=17% Similarity=0.163 Sum_probs=52.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
|+|.|+|+ |.+|..++.+|++.+ ++|.+..|+.++.+.... .. .............+. +....+|
T Consensus 1 MkI~IiGa-G~iG~~~a~~L~~~G-------~~V~~~~r~~~~~~~~~~-~~--~~~~~~~~~~~~~~~----~~~~~~D 65 (167)
T d1ks9a2 1 MKITVLGC-GALGQLWLTALCKQG-------HEVQGWLRVPQPYCSVNL-VE--TDGSIFNESLTANDP----DFLATSD 65 (167)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT-------CEEEEECSSCCSEEEEEE-EC--TTSCEEEEEEEESCH----HHHHTCS
T ss_pred CEEEEECc-CHHHHHHHHHHHHCC-------CceEEEEcCHHHhhhhcc-cc--CCccccccccccchh----hhhcccc
Confidence 78999998 999999999999988 899999998765432110 11 001111111222233 3345799
Q ss_pred eeEeccCCCCCCcHHHHHHHH
Q 014694 91 LLLNCVGPYRLHGDPVAAACV 111 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~Ac~ 111 (420)
+||.++-++.. +.+++.+.
T Consensus 66 ~iii~vka~~~--~~~~~~l~ 84 (167)
T d1ks9a2 66 LLLVTLKAWQV--SDAVKSLA 84 (167)
T ss_dssp EEEECSCGGGH--HHHHHHHH
T ss_pred eEEEeecccch--HHHHHhhc
Confidence 99999876542 34444443
|
| >d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Diaminopimelic acid dehydrogenase (DAPDH) species: Corynebacterium glutamicum [TaxId: 1718]
Probab=96.00 E-value=0.0054 Score=51.71 Aligned_cols=85 Identities=20% Similarity=0.236 Sum_probs=59.1
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceE-EEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v-~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
+++|.|+| +|++|+..++.|.+... +++ .+.+|+.++. ....... . .++..+..+
T Consensus 3 kirvgiiG-~G~ig~~~~~~l~~~~~------~elvav~~~~~~~~------------~~~~~~~--~---~~~~~~~~~ 58 (170)
T d1f06a1 3 NIRVAIVG-YGNLGRSVEKLIAKQPD------MDLVGIFSRRATLD------------TKTPVFD--V---ADVDKHADD 58 (170)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHTTCSS------EEEEEEEESSSCCS------------SSSCEEE--G---GGGGGTTTT
T ss_pred cceEEEEC-ChHHHHHHHHHHHhCCC------cEEEEEEecccccc------------ccccccc--c---hhhhhhccc
Confidence 58899998 59999999999877541 554 5677775432 1122221 1 233445568
Q ss_pred cCeeEeccCCCCCCcHHHHHHHHHcCCcEEec
Q 014694 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDI 120 (420)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdi 120 (420)
+|+|+.|..+... ..++..|.++|.|.|+.
T Consensus 59 ~D~Vvi~tp~~~h--~~~a~~aL~aG~~vv~~ 88 (170)
T d1f06a1 59 VDVLFLCMGSATD--IPEQAPKFAQFACTVDT 88 (170)
T ss_dssp CSEEEECSCTTTH--HHHHHHHHTTTSEEECC
T ss_pred cceEEEeCCCccc--HHHHHHHHHCCCcEEEe
Confidence 9999988876543 78999999999998864
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=95.99 E-value=0.0055 Score=44.93 Aligned_cols=45 Identities=18% Similarity=0.093 Sum_probs=36.9
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHh
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWA 61 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l 61 (420)
+..+|+|.||+|.+|...++.+...+ .+|+...++++|.+.+ +++
T Consensus 31 ~~~~vlI~gasGgVG~~aiQlak~~G-------~~Vi~~t~s~~k~~~~-~~l 75 (77)
T d1o8ca2 31 QDGEIVVTGASGGVGSTAVALLHKLG-------YQVVAVSGRESTHEYL-KSL 75 (77)
T ss_dssp GGCEEEESSTTSHHHHHHHHHHHHTT-------CCEEEEESCGGGHHHH-HHH
T ss_pred CCCcEEEEeCCCcHHHHHHHHHHHcC-------CeEEEEECCHHHHHHH-HHC
Confidence 45579999999999999999777766 7899999999998554 444
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=95.93 E-value=0.0098 Score=48.90 Aligned_cols=97 Identities=10% Similarity=0.034 Sum_probs=63.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHH-HhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQ-WASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~-~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
|+|-|+| .|.+|+.+++.|++++ +++.+.+|+.++...... ..+ + ++ +..++++++
T Consensus 1 MkIgiIG-~G~mG~~ia~~l~~~g-------~~v~~~~~~~~~~~~~~~~~~~--------~--~~-----~~~e~~~~~ 57 (152)
T d1i36a2 1 LRVGFIG-FGEVAQTLASRLRSRG-------VEVVTSLEGRSPSTIERARTVG--------V--TE-----TSEEDVYSC 57 (152)
T ss_dssp CEEEEES-CSHHHHHHHHHHHHTT-------CEEEECCTTCCHHHHHHHHHHT--------C--EE-----CCHHHHHTS
T ss_pred CEEEEEc-HHHHHHHHHHHHHHCC-------CeEEEEcCchhHHHHHhhhccc--------c--cc-----cHHHHHhhc
Confidence 6788996 5999999999999987 788888887766544433 221 1 12 235678999
Q ss_pred CeeEeccCCCCCCcHHHHHHHH-HcCCcEEecCCcHH-HHHHHHH
Q 014694 90 KLLLNCVGPYRLHGDPVAAACV-HSGCDYLDISGEPE-FMERMEA 132 (420)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~Ac~-~~g~~yvdisge~~-~~~~~~~ 132 (420)
|+||.|+-+.. ...++..+. ..+..+||+|...+ ..+++.+
T Consensus 58 diIi~~v~~~~--~~~~~~~~~~~~~~~~id~st~~p~~~~~l~~ 100 (152)
T d1i36a2 58 PVVISAVTPGV--ALGAARRAGRHVRGIYVDINNISPETVRMASS 100 (152)
T ss_dssp SEEEECSCGGG--HHHHHHHHHTTCCSEEEECSCCCHHHHHHHHH
T ss_pred CeEEEEecCch--HHHHHHhhcccCCceeeccCcCCHHHHHHHHH
Confidence 99999996532 133333333 23456999876554 4455443
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=95.81 E-value=0.0027 Score=54.22 Aligned_cols=43 Identities=19% Similarity=0.159 Sum_probs=36.7
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhC
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWAS 62 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~ 62 (420)
.|+|+||+|.+|...++.....+ .+|+...|+++|.+.+ ++++
T Consensus 34 ~vlV~gasGGVG~~aiQlAk~~G-------a~Via~~~~~~k~~~~-~~lG 76 (177)
T d1o89a2 34 EIVVTGASGGVGSTAVALLHKLG-------YQVVAVSGRESTHEYL-KSLG 76 (177)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTT-------CCEEEEESCGGGHHHH-HHHT
T ss_pred cEEEEEccccchHHHHHHHHHcC-------CCeEEEecchhHHHHH-Hhhc
Confidence 69999999999999999888777 7899999999998544 5564
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=95.58 E-value=0.0015 Score=55.42 Aligned_cols=43 Identities=19% Similarity=0.111 Sum_probs=36.4
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhC
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWAS 62 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~ 62 (420)
+|+|.||+|.+|...++.....+ .+|+...|+++|.+.+ ++++
T Consensus 26 ~VLV~gaaGgVG~~avQlAk~~G-------a~Viat~~s~~k~~~~-~~lG 68 (167)
T d1tt7a2 26 SVLVTGATGGVGGIAVSMLNKRG-------YDVVASTGNREAADYL-KQLG 68 (167)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHT-------CCEEEEESSSSTHHHH-HHHT
T ss_pred EEEEeCCcchHHHHHHHHHHHcC-------CceEEEecCHHHHHHH-Hhhc
Confidence 69999999999999998877777 7899999999998554 5554
|
| >d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Nicotinamide nucleotide transhydrogenase dI component species: Rhodospirillum rubrum [TaxId: 1085]
Probab=95.57 E-value=0.012 Score=50.21 Aligned_cols=78 Identities=12% Similarity=0.115 Sum_probs=56.0
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccE-------EE--------
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPI-------LT-------- 73 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~-------i~-------- 73 (420)
++-+|+|+|| |-.|...++-..+.+ ..|.+.+.+.++++++.+.... .+.+ ..
T Consensus 28 ~pa~VvViGa-GvaG~~Aa~~A~~lG-------A~V~v~D~~~~~~~~l~~l~~~----~i~~~~~~~~~~~~~~gyA~~ 95 (183)
T d1l7da1 28 PPARVLVFGV-GVAGLQAIATAKRLG-------AVVMATDVRAATKEQVESLGGK----FITVDDEAMKTAETAGGYAKE 95 (183)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTT-------CEEEEECSCSTTHHHHHHTTCE----ECCC-----------------
T ss_pred CCcEEEEEcC-cHHHHHHHHHHHHcC-------CEEEEEeccHHHHHHHHHhhcc----eEEEeccccccccccccchhh
Confidence 4568999998 999999999888888 7999999999998776553221 1110 00
Q ss_pred ----EeCCCHHHHHHHHhccCeeEeccCC
Q 014694 74 ----ADTTDPPSLHRLCSQTKLLLNCVGP 98 (420)
Q Consensus 74 ----~D~~d~~sl~~~~~~~dvVIn~aGp 98 (420)
.-..+.+.+.+.++++|+||.++-.
T Consensus 96 ~s~~~~~~~~~~l~~~l~~aDlVI~tali 124 (183)
T d1l7da1 96 MGEEFRKKQAEAVLKELVKTDIAITTALI 124 (183)
T ss_dssp ------CCHHHHHHHHHTTCSEEEECCCC
T ss_pred cCHHHHHHHHHHHHHHHHhhhhheeeeec
Confidence 0112356788889999999998853
|
| >d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Maltose-6'-phosphate glucosidase GlvA species: Bacillus subtilis [TaxId: 1423]
Probab=95.54 E-value=0.015 Score=48.92 Aligned_cols=107 Identities=12% Similarity=0.108 Sum_probs=61.7
Q ss_pred CcceEEEEcCCcHHHH-HHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC---CCCCCccEEEEeCCCHHHHHH
Q 014694 9 ELFDVIILGASGFTGK-YVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP---SHSLSIPILTADTTDPPSLHR 84 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~-~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~---~~~~~~~~i~~D~~d~~sl~~ 84 (420)
+.++|+|+||.+ +|. .++..++.+.+ .++ .-++++.+.++++++...+.+.. .......+... .+..+
T Consensus 2 k~~KI~iIGaGs-v~~~~~~~~ll~~~~-~l~-~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~e 73 (167)
T d1u8xx1 2 KSFSIVIAGGGS-TFTPGIVLMLLDHLE-EFP-IRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT-----TDPEE 73 (167)
T ss_dssp CCEEEEEECTTS-SSHHHHHHHHHHTTT-TSC-EEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE-----SCHHH
T ss_pred CCceEEEECCCh-hhhHHHHHHHHhhhh-hcC-CCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEec-----CChhh
Confidence 568999999844 444 34555555432 111 14799999999998744333211 00122333322 23677
Q ss_pred HHhccCeeEeccCCCCCCc-HHHHHHHHHcCCcEEecCCc
Q 014694 85 LCSQTKLLLNCVGPYRLHG-DPVAAACVHSGCDYLDISGE 123 (420)
Q Consensus 85 ~~~~~dvVIn~aGp~~~~~-~~vv~Ac~~~g~~yvdisge 123 (420)
.++++|+||+++|+....+ ...-....++|..--+.+|.
T Consensus 74 al~~AD~Vvitag~~~~~g~~rd~~i~~~~Gi~~~~t~g~ 113 (167)
T d1u8xx1 74 AFTDVDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGP 113 (167)
T ss_dssp HHSSCSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHH
T ss_pred ccCCCCEEEECCCcCCCCceeHHHhhchhcCceeeccccC
Confidence 8899999999999755433 33344455566533344443
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=95.54 E-value=0.026 Score=42.36 Aligned_cols=87 Identities=18% Similarity=0.185 Sum_probs=58.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
.+|+|+|. |-+|..++++|.+++ .+|.+.+.+.... ..+++. ....+..... +. ..+.+.|
T Consensus 6 K~v~ViGl-G~sG~s~a~~L~~~g-------~~v~~~D~~~~~~--~~~~~~----~~~~~~~~~~-~~----~~~~~~d 66 (93)
T d2jfga1 6 KNVVIIGL-GLTGLSCVDFFLARG-------VTPRVMDTRMTPP--GLDKLP----EAVERHTGSL-ND----EWLMAAD 66 (93)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTT-------CCCEEEESSSSCT--TGGGSC----TTSCEEESBC-CH----HHHHHCS
T ss_pred CEEEEEeE-CHHHHHHHHHHHHCC-------CEEEEeeCCcCch--hHHHHh----hccceeeccc-ch----hhhccCC
Confidence 47999998 889999999999998 7889888754321 112221 2334443332 22 2356789
Q ss_pred eeEeccCCCCCCcHHHHHHHHHcCCcEE
Q 014694 91 LLLNCVGPYRLHGDPVAAACVHSGCDYL 118 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~Ac~~~g~~yv 118 (420)
.||-.-|. ....++++.+.+.|+..|
T Consensus 67 ~vi~SPGi--~~~~~~~~~a~~~gi~ii 92 (93)
T d2jfga1 67 LIVASPGI--ALAHPSLSAAADAGIEIV 92 (93)
T ss_dssp EEEECTTS--CTTSHHHHHHHHTTCEEE
T ss_pred EEEECCCC--CCCCHHHHHHHHcCCCeE
Confidence 99877664 345789999999988654
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=95.52 E-value=0.0065 Score=52.30 Aligned_cols=74 Identities=11% Similarity=0.150 Sum_probs=52.7
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCC-CCCCcc---EEEEeCCCHHHHHHHHh
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIP---ILTADTTDPPSLHRLCS 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~-~~~~~~---~i~~D~~d~~sl~~~~~ 87 (420)
+|.|+|| |.-|..++..|++.+ .+|.+.+|+++..+.+.+.-..+ -.+++. -+.+. .+++++++
T Consensus 9 KI~ViGa-G~wGtAlA~~La~~g-------~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i~~t----~~l~~a~~ 76 (189)
T d1n1ea2 9 KAVVFGS-GAFGTALAMVLSKKC-------REVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFT----SDVEKAYN 76 (189)
T ss_dssp EEEEECC-SHHHHHHHHHHHTTE-------EEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEE----SCHHHHHT
T ss_pred eEEEECC-CHHHHHHHHHHHHcC-------CeEEEEEecHHHHHHHhhcccccccccccccccccccc----hhhhhccC
Confidence 6999997 889999999999887 79999999999887766532100 001111 12221 34788899
Q ss_pred ccCeeEeccC
Q 014694 88 QTKLLLNCVG 97 (420)
Q Consensus 88 ~~dvVIn~aG 97 (420)
++|+||-++-
T Consensus 77 ~ad~iiiavP 86 (189)
T d1n1ea2 77 GAEIILFVIP 86 (189)
T ss_dssp TCSCEEECSC
T ss_pred CCCEEEEcCc
Confidence 9999998873
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=95.50 E-value=0.0082 Score=51.05 Aligned_cols=73 Identities=15% Similarity=0.036 Sum_probs=48.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHH-HHHHHH--h
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPP-SLHRLC--S 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~-sl~~~~--~ 87 (420)
-.|+|.||+|.+|...++-....+ .+|+...++++|.+.+ .+++. +. ..|..+.. +..+.. +
T Consensus 33 ~~VLI~gaaGGVG~~aiQlak~~G-------a~Viat~~s~~k~~~~-~~lGa------~~-vi~~~~~~~~~~~~~~~~ 97 (176)
T d1xa0a2 33 GPVLVTGATGGVGSLAVSMLAKRG-------YTVEASTGKAAEHDYL-RVLGA------KE-VLAREDVMAERIRPLDKQ 97 (176)
T ss_dssp CCEEESSTTSHHHHHHHHHHHHTT-------CCEEEEESCTTCHHHH-HHTTC------SE-EEECC---------CCSC
T ss_pred CEEEEEeccchHHHHHHHHHHHcC-------CceEEecCchHHHHHH-Hhccc------ce-eeecchhHHHHHHHhhcc
Confidence 469999999999999998877776 7899999999998544 45541 21 22433221 111111 2
Q ss_pred ccCeeEeccCC
Q 014694 88 QTKLLLNCVGP 98 (420)
Q Consensus 88 ~~dvVIn~aGp 98 (420)
+.|+||+++|-
T Consensus 98 gvD~vid~vgg 108 (176)
T d1xa0a2 98 RWAAAVDPVGG 108 (176)
T ss_dssp CEEEEEECSTT
T ss_pred CcCEEEEcCCc
Confidence 57899999884
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=95.47 E-value=0.031 Score=49.50 Aligned_cols=101 Identities=19% Similarity=0.212 Sum_probs=67.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC-------------------hhHHHHHHHHhCCCCCCCccE
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASPSHSLSIPI 71 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs-------------------~~kl~~~~~~l~~~~~~~~~~ 71 (420)
-+|+|+|+ |.+|..++.+|++.|- -++.+++.+ ..|.+.+.+.+.. ..+.+.+
T Consensus 31 ~~VliiG~-GglGs~va~~La~~Gv------g~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~-~np~~~i 102 (247)
T d1jw9b_ 31 SRVLIVGL-GGLGCAASQYLASAGV------GNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTR-INPHIAI 102 (247)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTC------SEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHH-HCTTSEE
T ss_pred CCEEEECC-CHHHHHHHHHHHHcCC------CeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHH-hhcccch
Confidence 47999997 7799999999999983 477887743 1244444443321 1234555
Q ss_pred EEEeC-CCHHHHHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEec
Q 014694 72 LTADT-TDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDI 120 (420)
Q Consensus 72 i~~D~-~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdi 120 (420)
...+. .+.+.+.......|+||.+...+. ....+-++|.++++.+|..
T Consensus 103 ~~~~~~~~~~~~~~~~~~~divid~~d~~~-~~~~in~~~~~~~ip~i~g 151 (247)
T d1jw9b_ 103 TPVNALLDDAELAALIAEHDLVLDCTDNVA-VRNQLNAGCFAAKVPLVSG 151 (247)
T ss_dssp EEECSCCCHHHHHHHHHTSSEEEECCSSHH-HHHHHHHHHHHHTCCEEEE
T ss_pred hhhhhhhhhccccccccccceeeeccchhh-hhhhHHHHHHHhCCCcccc
Confidence 55543 245667778889999998886533 2345667888888877764
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=95.39 E-value=0.025 Score=47.11 Aligned_cols=73 Identities=10% Similarity=0.077 Sum_probs=48.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCC-CHHHHHHHH---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTT-DPPSLHRLC--- 86 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~-d~~sl~~~~--- 86 (420)
-.|+|.|+ |.+|...++.+...+. .+|++++++++|+ ++.++++. .. ..|.. +.+.+.+.+
T Consensus 30 ~tVlI~Ga-GGvG~~aiq~ak~~G~------~~vi~~~~~~~k~-~~ak~lGa------~~-~i~~~~~~~~~~~~~~~~ 94 (176)
T d2fzwa2 30 SVCAVFGL-GGVGLAVIMGCKVAGA------SRIIGVDINKDKF-ARAKEFGA------TE-CINPQDFSKPIQEVLIEM 94 (176)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTC------SEEEEECSCGGGH-HHHHHHTC------SE-EECGGGCSSCHHHHHHHH
T ss_pred CEEEEecc-hhHHHHHHHHHHHHhc------CceEEEcccHHHH-HHHHHhCC------cE-EEeCCchhhHHHHHHHHH
Confidence 36899988 5689999999888872 5788888888887 45666752 11 12222 122233332
Q ss_pred --hccCeeEeccCC
Q 014694 87 --SQTKLLLNCVGP 98 (420)
Q Consensus 87 --~~~dvVIn~aGp 98 (420)
.++|+||.++|.
T Consensus 95 ~~~g~D~vid~~G~ 108 (176)
T d2fzwa2 95 TDGGVDYSFECIGN 108 (176)
T ss_dssp TTSCBSEEEECSCC
T ss_pred cCCCCcEeeecCCC
Confidence 258999999884
|
| >d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: GDI-like N domain domain: Guanine nucleotide dissociation inhibitor, GDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.24 E-value=0.0087 Score=51.03 Aligned_cols=38 Identities=24% Similarity=0.206 Sum_probs=33.7
Q ss_pred CCCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh
Q 014694 6 QIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP 51 (420)
Q Consensus 6 ~~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~ 51 (420)
+|+.+|||+|+|| |..|..+|.+|++.| ++|.++.++.
T Consensus 1 ~m~~~yDviViGa-G~~Gl~~A~~La~~G-------~~V~vlE~~~ 38 (297)
T d2bcgg1 1 TIDTDYDVIVLGT-GITECILSGLLSVDG-------KKVLHIDKQD 38 (297)
T ss_dssp CCCCBCSEEEECC-SHHHHHHHHHHHHTT-------CCEEEECSSS
T ss_pred CCCCcCCEEEECc-CHHHHHHHHHHHHCC-------CCEEEEcCCC
Confidence 4678899999996 999999999999988 8999998863
|
| >d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=95.22 E-value=0.035 Score=45.65 Aligned_cols=42 Identities=14% Similarity=0.127 Sum_probs=33.2
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhC
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWAS 62 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~ 62 (420)
+|-++|- |.+|..++++|++.+ + ..+..|+.++.+.+.++..
T Consensus 2 kIg~IGl-G~MG~~ma~~L~~~g-------~-~~~~~~~~~~~~~~~~~~~ 43 (156)
T d2cvza2 2 KVAFIGL-GAMGYPMAGHLARRF-------P-TLVWNRTFEKALRHQEEFG 43 (156)
T ss_dssp CEEEECC-STTHHHHHHHHHTTS-------C-EEEECSSTHHHHHHHHHHC
T ss_pred eEEEEeH-HHHHHHHHHHHHhCC-------C-EEEEeCCHHHHHHHHHHcC
Confidence 4778875 999999999999876 3 3467899888877777654
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=95.19 E-value=0.0081 Score=51.99 Aligned_cols=76 Identities=16% Similarity=0.219 Sum_probs=52.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCc----------cEEEEeCCCHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSI----------PILTADTTDPP 80 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~----------~~i~~D~~d~~ 80 (420)
|+|.|+|. ||+|..++..|++.+ ++|.+.+.|.++++.+.+.......+.. ..+.+ ..
T Consensus 1 MkI~ViGl-G~vGl~~a~~la~~g-------~~V~g~D~n~~~i~~ln~g~~p~~e~~~~~~l~~~~~~~~~~~----~~ 68 (202)
T d1mv8a2 1 MRISIFGL-GYVGAVCAGCLSARG-------HEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSG----TT 68 (202)
T ss_dssp CEEEEECC-STTHHHHHHHHHHTT-------CEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE----ES
T ss_pred CEEEEECC-CHhHHHHHHHHHhCC-------CcEEEEeCCHHHHHHhcccCCcccchhhhhhhhhhhccccccc----CC
Confidence 68999975 999999999999998 8999999999988766542210000000 00111 12
Q ss_pred HHHHHHhccCeeEeccCC
Q 014694 81 SLHRLCSQTKLLLNCVGP 98 (420)
Q Consensus 81 sl~~~~~~~dvVIn~aGp 98 (420)
++.+.++.+|+++-|++.
T Consensus 69 ~~~~~i~~~d~i~i~VpT 86 (202)
T d1mv8a2 69 DFKKAVLDSDVSFICVGT 86 (202)
T ss_dssp CHHHHHHTCSEEEECCCC
T ss_pred CHHHHHhhCCEEEEecCc
Confidence 356677889999999974
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=95.10 E-value=0.038 Score=46.07 Aligned_cols=72 Identities=15% Similarity=0.163 Sum_probs=48.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
-.|+|+|+ |.+|...++.+...+. .++++.+++++|++... +++. .. ..|..+ +.+++..+
T Consensus 34 ~~vli~Ga-G~vG~~~~~~a~~~g~------~~vv~~~~~~~k~~~~~-~~ga-----~~--~i~~~~-~~~~~~~~~~~ 97 (172)
T d1h2ba2 34 AYVAIVGV-GGLGHIAVQLLKVMTP------ATVIALDVKEEKLKLAE-RLGA-----DH--VVDARR-DPVKQVMELTR 97 (172)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHCC------CEEEEEESSHHHHHHHH-HTTC-----SE--EEETTS-CHHHHHHHHTT
T ss_pred CEEEEeCC-ChHHHHHHHHHHhhcC------cccccccchhHHHHHHh-hccc-----ce--eecCcc-cHHHHHHHhhC
Confidence 35788876 9999999998877772 57888899999986544 4431 12 234433 23333332
Q ss_pred --ccCeeEeccCC
Q 014694 88 --QTKLLLNCVGP 98 (420)
Q Consensus 88 --~~dvVIn~aGp 98 (420)
+.|+||.|+|-
T Consensus 98 ~~g~d~vid~~g~ 110 (172)
T d1h2ba2 98 GRGVNVAMDFVGS 110 (172)
T ss_dssp TCCEEEEEESSCC
T ss_pred CCCceEEEEecCc
Confidence 47999999983
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=95.04 E-value=0.019 Score=44.86 Aligned_cols=88 Identities=16% Similarity=0.161 Sum_probs=62.1
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
...+|.|+|+ |.+|+-++....+.+ +++.+.+.+++.-.. .+ --..+.+|.+|.+.+.+++.
T Consensus 10 ~~~kigIlGg-GQL~rMla~aA~~lG-------~~v~v~d~~~~~PA~---~v------a~~~i~~~~~d~~~l~~~~~~ 72 (111)
T d1kjqa2 10 AATRVMLLGS-GELGKEVAIECQRLG-------VEVIAVDRYADAPAM---HV------AHRSHVINMLDGDALRRVVEL 72 (111)
T ss_dssp TCCEEEEESC-SHHHHHHHHHHHTTT-------CEEEEEESSTTCGGG---GG------SSEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEEeC-CHHHHHHHHHHHHCC-------CEEEEEcCCCCCchh---hc------CCeEEECCCCCHHHHHHHHHh
Confidence 4458999995 999999999987777 899999987654211 11 12578899999999999986
Q ss_pred -ccCeeEeccCCCCCCcHHHHHHHHHcCCc
Q 014694 88 -QTKLLLNCVGPYRLHGDPVAAACVHSGCD 116 (420)
Q Consensus 88 -~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~ 116 (420)
++|+|-- -+..-...+++.+.+.|+.
T Consensus 73 ~~~DviT~---E~EnI~~~~L~~le~~g~~ 99 (111)
T d1kjqa2 73 EKPHYIVP---EIEAIATDMLIQLEEEGLN 99 (111)
T ss_dssp HCCSEEEE---CSSCSCHHHHHHHHHTTCE
T ss_pred hCCceEEE---EecCcCHHHHHHHHHCCCe
Confidence 4687731 1233346667776666553
|
| >d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative oxidoreductase VCA1048 species: Vibrio cholerae [TaxId: 666]
Probab=95.00 E-value=0.035 Score=46.01 Aligned_cols=102 Identities=15% Similarity=0.124 Sum_probs=66.2
Q ss_pred ceEEEEcCCcHHHHH-HHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 11 FDVIILGASGFTGKY-VVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~-va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
++|.|+|+ |.+|+. .+..+.+.. ...++++++++++++.+.++++. ..+ .+|.+++.+ .+.
T Consensus 2 irvgiiG~-G~~~~~~~~~~l~~~~------~~~~~~~d~~~~~~~~~~~~~~~------~~~---~~~~~~ll~--~~i 63 (167)
T d1xeaa1 2 LKIAMIGL-GDIAQKAYLPVLAQWP------DIELVLCTRNPKVLGTLATRYRV------SAT---CTDYRDVLQ--YGV 63 (167)
T ss_dssp EEEEEECC-CHHHHHTHHHHHTTST------TEEEEEECSCHHHHHHHHHHTTC------CCC---CSSTTGGGG--GCC
T ss_pred eEEEEEcC-CHHHHHHHHHHHHhCC------CcEEEEEECCHHHHHHHHHhccc------ccc---cccHHHhcc--ccc
Confidence 68999986 778865 444444433 27888999999999888887642 111 123232222 368
Q ss_pred CeeEeccCCCCCCcHHHHHHHHHcCCcE-Ee--cCCcHHHHHHHHH
Q 014694 90 KLLLNCVGPYRLHGDPVAAACVHSGCDY-LD--ISGEPEFMERMEA 132 (420)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~Ac~~~g~~y-vd--isge~~~~~~~~~ 132 (420)
|+|+-|..+.. ...++.+|.++|.|. ++ ++-...=.++|.+
T Consensus 64 D~V~I~tp~~~--H~~~~~~al~~gk~V~~EKP~~~~~~e~~~l~~ 107 (167)
T d1xeaa1 64 DAVMIHAATDV--HSTLAAFFLHLGIPTFVDKPLAASAQECENLYE 107 (167)
T ss_dssp SEEEECSCGGG--HHHHHHHHHHTTCCEEEESCSCSSHHHHHHHHH
T ss_pred ceecccccccc--cccccccccccccccccCCCCcCCHHHHHHHHH
Confidence 99887765533 368889999999984 43 4555555566665
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=94.95 E-value=0.064 Score=44.66 Aligned_cols=74 Identities=9% Similarity=0.029 Sum_probs=48.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEE--eCCC-HHHHHHHH-
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTA--DTTD-PPSLHRLC- 86 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~--D~~d-~~sl~~~~- 86 (420)
-.|+|+|+ |.+|...+..+...+. .+|++++++++|++ +..+++ ...... |..| .+.+.+..
T Consensus 30 dtVlV~Ga-GG~G~~~~~~~~~~g~------~~Vi~~~~~~~k~~-~a~~~G------a~~~i~~~~~~~~~~~~~~~~~ 95 (176)
T d2jhfa2 30 STCAVFGL-GGVGLSVIMGCKAAGA------ARIIGVDINKDKFA-KAKEVG------ATECVNPQDYKKPIQEVLTEMS 95 (176)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC------SEEEEECSCGGGHH-HHHHTT------CSEEECGGGCSSCHHHHHHHHT
T ss_pred CEEEEECC-CCcHHHHHHHHHHcCC------ceEEeecCcHHHHH-HHHHhC------CeeEEecCCchhHHHHHHHHHh
Confidence 46999999 5689999999888762 68999999999985 445553 121111 2111 12222222
Q ss_pred -hccCeeEeccCC
Q 014694 87 -SQTKLLLNCVGP 98 (420)
Q Consensus 87 -~~~dvVIn~aGp 98 (420)
.+.|++|.++|.
T Consensus 96 ~~G~D~vid~~G~ 108 (176)
T d2jhfa2 96 NGGVDFSFEVIGR 108 (176)
T ss_dssp TSCBSEEEECSCC
T ss_pred cCCCCEEEecCCc
Confidence 258999998885
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=94.88 E-value=0.056 Score=46.23 Aligned_cols=73 Identities=21% Similarity=0.245 Sum_probs=49.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHH---HHHHHHh
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPP---SLHRLCS 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~---sl~~~~~ 87 (420)
-+|+|+|+ |.+|...++.+...+. .+|++++++++|++ ++++++ .. ...|..+.+ .+.++..
T Consensus 27 ~tVlV~Ga-G~vGl~a~~~ak~~ga------~~Vi~~d~~~~rl~-~a~~~G------a~-~~~~~~~~~~~~~i~~~t~ 91 (195)
T d1kola2 27 STVYVAGA-GPVGLAAAASARLLGA------AVVIVGDLNPARLA-HAKAQG------FE-IADLSLDTPLHEQIAALLG 91 (195)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC------SEEEEEESCHHHHH-HHHHTT------CE-EEETTSSSCHHHHHHHHHS
T ss_pred CEEEEECc-CHHHHHHHHHHHhhcc------cceeeecccchhhH-hhhhcc------cc-EEEeCCCcCHHHHHHHHhC
Confidence 47999986 8999888777666652 58999999999985 445554 22 223333332 3344433
Q ss_pred --ccCeeEeccCC
Q 014694 88 --QTKLLLNCVGP 98 (420)
Q Consensus 88 --~~dvVIn~aGp 98 (420)
++|++|.++|.
T Consensus 92 g~g~D~vid~vG~ 104 (195)
T d1kola2 92 EPEVDCAVDAVGF 104 (195)
T ss_dssp SSCEEEEEECCCT
T ss_pred CCCcEEEEECccc
Confidence 58999999984
|
| >d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Virulence factor MviM species: Escherichia coli [TaxId: 562]
Probab=94.83 E-value=0.048 Score=45.03 Aligned_cols=101 Identities=12% Similarity=0.087 Sum_probs=65.0
Q ss_pred cceEEEEcCCcHHHHHH-HHHHHHhCCCCCCCcceE-EEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh
Q 014694 10 LFDVIILGASGFTGKYV-VREALKLFNFPSSPIKSL-ALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~v-a~~L~~~~~~~~~~~~~v-~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
+++|.|+|. |.+|+.. +..+.... .+++ .+.+++.++.+.+.++.+ +++ .++ ++.+.+
T Consensus 1 Kiri~iIG~-G~~g~~~~~~~l~~~~------~~~i~~v~d~~~~~~~~~~~~~~------~~~----~~~---~~~l~~ 60 (164)
T d1tlta1 1 KLRIGVVGL-GGIAQKAWLPVLAAAS------DWTLQGAWSPTRAKALPICESWR------IPY----ADS---LSSLAA 60 (164)
T ss_dssp CEEEEEECC-STHHHHTHHHHHHSCS------SEEEEEEECSSCTTHHHHHHHHT------CCB----CSS---HHHHHT
T ss_pred CCEEEEEcC-CHHHHHHHHHHHHhCC------CcEEEEEEechhHhhhhhhhccc------ccc----ccc---chhhhh
Confidence 478999985 8899754 44554432 1554 678899999888887764 121 223 445567
Q ss_pred ccCeeEeccCCCCCCcHHHHHHHHHcCCc-EEe--cCCcHHHHHHHHH
Q 014694 88 QTKLLLNCVGPYRLHGDPVAAACVHSGCD-YLD--ISGEPEFMERMEA 132 (420)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~-yvd--isge~~~~~~~~~ 132 (420)
++|+|+-|.-+. ....++..|.++|.| +++ ++-...=.+++.+
T Consensus 61 ~~D~V~I~tp~~--~h~~~~~~al~~gk~V~~EKPla~~~~e~~~l~~ 106 (164)
T d1tlta1 61 SCDAVFVHSSTA--SHFDVVSTLLNAGVHVCVDKPLAENLRDAERLVE 106 (164)
T ss_dssp TCSEEEECSCTT--HHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHH
T ss_pred hcccccccccch--hccccccccccccceeeccccccCCHHHHHHHHH
Confidence 899988666432 236788899999998 444 4444444455544
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=94.81 E-value=0.028 Score=44.59 Aligned_cols=69 Identities=14% Similarity=0.166 Sum_probs=54.0
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-HhccC
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CSQTK 90 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~-~~~~d 90 (420)
.|+|.|. |-+|+.+++.|.. ..+.+...++++.+.+.+ .++.++.+|.+|++.|+++ +.+++
T Consensus 2 HivI~G~-g~~g~~l~~~L~~---------~~i~vi~~d~~~~~~~~~-------~~~~~i~Gd~~~~~~L~~a~i~~A~ 64 (129)
T d2fy8a1 2 HVVICGW-SESTLECLRELRG---------SEVFVLAEDENVRKKVLR-------SGANFVHGDPTRVSDLEKANVRGAR 64 (129)
T ss_dssp CEEEESC-CHHHHHHHHTSCG---------GGEEEEESCTTHHHHHHH-------TTCEEEESCTTSHHHHHHTTCTTCS
T ss_pred EEEEECC-CHHHHHHHHHHcC---------CCCEEEEcchHHHHHHHh-------cCccccccccCCHHHHHHhhhhcCc
Confidence 4788886 7789999999843 356778899888766543 3578899999999999886 67899
Q ss_pred eeEeccC
Q 014694 91 LLLNCVG 97 (420)
Q Consensus 91 vVIn~aG 97 (420)
.+|-+..
T Consensus 65 ~vi~~~~ 71 (129)
T d2fy8a1 65 AVIVNLE 71 (129)
T ss_dssp EEEECCS
T ss_pred EEEEecc
Confidence 8887654
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=94.76 E-value=0.074 Score=44.57 Aligned_cols=77 Identities=12% Similarity=0.086 Sum_probs=49.9
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCC--HHHHHHHH
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTD--PPSLHRLC 86 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d--~~sl~~~~ 86 (420)
..-.|+|+|+ |.+|...++.+...+. .+|++.+++++|+ ++.++++. ..++...-.| ...+.+..
T Consensus 28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga------~~Vi~~d~~~~r~-~~a~~~Ga-----~~~i~~~~~~~~~~~~~~~~ 94 (174)
T d1e3ia2 28 PGSTCAVFGL-GCVGLSAIIGCKIAGA------SRIIAIDINGEKF-PKAKALGA-----TDCLNPRELDKPVQDVITEL 94 (174)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTC------SEEEEECSCGGGH-HHHHHTTC-----SEEECGGGCSSCHHHHHHHH
T ss_pred CCCEEEEECC-ChHHHHHHHHHHHhCC------ceeeeeccchHHH-HHHHHhCC-----CcccCCccchhhhhhhHhhh
Confidence 3347999986 9999999999888772 4788999999998 56666752 1122111111 12222222
Q ss_pred --hccCeeEeccCC
Q 014694 87 --SQTKLLLNCVGP 98 (420)
Q Consensus 87 --~~~dvVIn~aGp 98 (420)
.++|+||.|+|-
T Consensus 95 ~~~G~d~vie~~G~ 108 (174)
T d1e3ia2 95 TAGGVDYSLDCAGT 108 (174)
T ss_dssp HTSCBSEEEESSCC
T ss_pred hcCCCcEEEEeccc
Confidence 368999999883
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=94.69 E-value=0.05 Score=45.70 Aligned_cols=73 Identities=10% Similarity=0.063 Sum_probs=49.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCC----HHHHHHHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTD----PPSLHRLC 86 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d----~~sl~~~~ 86 (420)
-.|+|+|+ |.+|...++.+...+. .+|++.+++++|++ +.++++. .. ..|..| .+.+.+..
T Consensus 31 ~tVlI~G~-GgvGl~ai~~ak~~G~------~~Vi~vd~~~~kl~-~Ak~~GA------~~-~in~~~~~~~~~~~~~~~ 95 (176)
T d1d1ta2 31 STCVVFGL-GGVGLSVIMGCKSAGA------SRIIGIDLNKDKFE-KAMAVGA------TE-CISPKDSTKPISEVLSEM 95 (176)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC------SEEEEECSCGGGHH-HHHHHTC------SE-EECGGGCSSCHHHHHHHH
T ss_pred CEEEEECC-CchhHHHHHHHHHcCC------ceEEEecCcHHHHH-HHHhcCC------cE-EECccccchHHHHHHHHh
Confidence 35899986 8999999999888772 58999999999995 6666652 11 122222 22333333
Q ss_pred --hccCeeEeccCC
Q 014694 87 --SQTKLLLNCVGP 98 (420)
Q Consensus 87 --~~~dvVIn~aGp 98 (420)
.+.|++|.++|.
T Consensus 96 ~g~G~d~vi~~~g~ 109 (176)
T d1d1ta2 96 TGNNVGYTFEVIGH 109 (176)
T ss_dssp HTSCCCEEEECSCC
T ss_pred ccccceEEEEeCCc
Confidence 258888888874
|
| >d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Probable oxidoreductase At4g09670 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=94.62 E-value=0.11 Score=43.60 Aligned_cols=105 Identities=13% Similarity=0.079 Sum_probs=68.1
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceE-EEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v-~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
+++|.|+|. |.+|+..++.|..... .++ ++.+++.++.+.+.++.+. .....+ .+| ++++++
T Consensus 1 kiki~iIG~-G~~g~~~~~~l~~~~~------~~i~ai~d~~~~~~~~~~~~~~~--~~~~~~----~~~---~~~ll~~ 64 (184)
T d1ydwa1 1 QIRIGVMGC-ADIARKVSRAIHLAPN------ATISGVASRSLEKAKAFATANNY--PESTKI----HGS---YESLLED 64 (184)
T ss_dssp CEEEEEESC-CTTHHHHHHHHHHCTT------EEEEEEECSSHHHHHHHHHHTTC--CTTCEE----ESS---HHHHHHC
T ss_pred CeEEEEEcC-CHHHHHHHHHHHhCCC------CEEEEEEeCCccccccchhcccc--ccceee----cCc---HHHhhhc
Confidence 468999995 8899999888876531 555 4779999998888776642 111111 123 555554
Q ss_pred -ccCeeEeccCCCCCCcHHHHHHHHHcCCcE-Ee--cCCcHHHHHHHHH
Q 014694 88 -QTKLLLNCVGPYRLHGDPVAAACVHSGCDY-LD--ISGEPEFMERMEA 132 (420)
Q Consensus 88 -~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~y-vd--isge~~~~~~~~~ 132 (420)
+.|+|+-+..+... ..++..|.++|.|. ++ ++-...=.+++++
T Consensus 65 ~~iD~v~I~tp~~~h--~~~~~~~l~~g~~v~~EKP~~~~~~e~~~l~~ 111 (184)
T d1ydwa1 65 PEIDALYVPLPTSLH--VEWAIKAAEKGKHILLEKPVAMNVTEFDKIVD 111 (184)
T ss_dssp TTCCEEEECCCGGGH--HHHHHHHHTTTCEEEECSSCSSSHHHHHHHHH
T ss_pred cccceeeecccchhh--cchhhhhhhccceeecccccccCHHHHHHHHH
Confidence 57888866654332 57788899999984 43 3444444555554
|
| >d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glucose-fructose oxidoreductase, N-terminal domain species: Zymomonas mobilis [TaxId: 542]
Probab=94.59 E-value=0.04 Score=48.11 Aligned_cols=111 Identities=13% Similarity=0.069 Sum_probs=70.8
Q ss_pred CCCCCcceEEEEcCCcHHHH-HHHHHHHHhCCCCCCCcceE-EEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHH
Q 014694 5 SQIPELFDVIILGASGFTGK-YVVREALKLFNFPSSPIKSL-ALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSL 82 (420)
Q Consensus 5 ~~~~~~~~IvV~GATG~~G~-~va~~L~~~~~~~~~~~~~v-~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl 82 (420)
....++.+|-|+|+ |.+|+ ++++.+.... ..++ ++++|++++++.+.++.+. ....+. ..+| +
T Consensus 28 ~~~~~~iriaiIG~-G~~~~~~~~~~~~~~~------~~~ivav~d~~~~~a~~~~~~~~i---~~~~~~--~~~d---~ 92 (221)
T d1h6da1 28 MPEDRRFGYAIVGL-GKYALNQILPGFAGCQ------HSRIEALVSGNAEKAKIVAAEYGV---DPRKIY--DYSN---F 92 (221)
T ss_dssp CCCCCCEEEEEECC-SHHHHHTHHHHTTTCS------SEEEEEEECSCHHHHHHHHHHTTC---CGGGEE--CSSS---G
T ss_pred CCCCCCEEEEEEcC-cHHHHHHHHHHHHhCC------CceEEEEecCCHHHHHHHHHhhcc---cccccc--ccCc---h
Confidence 34557889999996 88886 4555554432 1555 5889999999988887642 111211 1233 4
Q ss_pred HHHHh--ccCeeEeccCCCCCCcHHHHHHHHHcCCc-EEe--cCCcHHHHHHHHH
Q 014694 83 HRLCS--QTKLLLNCVGPYRLHGDPVAAACVHSGCD-YLD--ISGEPEFMERMEA 132 (420)
Q Consensus 83 ~~~~~--~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~-yvd--isge~~~~~~~~~ 132 (420)
+++++ ++|+|+-+..+... ..++..|.++|.| +++ ++....=.++|++
T Consensus 93 ~ell~~~~iD~V~I~tp~~~H--~~~~~~al~~gk~v~~EKPla~~~~e~~~l~~ 145 (221)
T d1h6da1 93 DKIAKDPKIDAVYIILPNSLH--AEFAIRAFKAGKHVMCEKPMATSVADCQRMID 145 (221)
T ss_dssp GGGGGCTTCCEEEECSCGGGH--HHHHHHHHHTTCEEEECSSCCSSHHHHHHHHH
T ss_pred hhhcccccceeeeeccchhhh--hhHHHHhhhcchhhhcCCCccCCHHHHHHHHH
Confidence 45554 57888877665433 5778888899988 555 4555555566665
|
| >d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Escherichia coli [TaxId: 562]
Probab=94.52 E-value=0.0072 Score=50.76 Aligned_cols=101 Identities=20% Similarity=0.181 Sum_probs=60.4
Q ss_pred CCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceE-EEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHH
Q 014694 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 8 ~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v-~iagRs~~kl~~~~~~l~~-~~~~~~~~i~~D~~d~~sl~~~ 85 (420)
+..++|.|.||+|-+|+.+++.+.+... +++ ...+|..... +-+.++. .......+.. .++++.+
T Consensus 2 ~s~ikI~i~Ga~GrMG~~i~~~i~~~~~------~~lv~~~~~~~~~~--~g~d~~~~~~~~~~~~~~-----~~~~~~~ 68 (162)
T d1diha1 2 DANIRVAIAGAGGRMGRQLIQAALALEG------VQLGAALEREGSSL--LGSDAGELAGAGKTGVTV-----QSSLDAV 68 (162)
T ss_dssp CCBEEEEETTTTSHHHHHHHHHHHHSTT------EECCCEECCTTCTT--CSCCTTCSSSSSCCSCCE-----ESCSTTT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCC------CEEEEEEecccchh--ccchhhhhhccccCCcee-----eccHHHH
Confidence 3568999999999999999999988752 555 3334432221 0011110 0001111111 1223456
Q ss_pred HhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEe-cCCc
Q 014694 86 CSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLD-ISGE 123 (420)
Q Consensus 86 ~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvd-isge 123 (420)
++.+||||-..-|-. ....++.|.++++++|- .||-
T Consensus 69 ~~~~DViIDFs~p~~--~~~~~~~a~~~~~~~ViGTTG~ 105 (162)
T d1diha1 69 KDDFDVFIDFTRPEG--TLNHLAFCRQHGKGMVIGTTGF 105 (162)
T ss_dssp TTSCSEEEECSCHHH--HHHHHHHHHHTTCEEEECCCCC
T ss_pred hcccceEEEeccHHH--HHHHHHHHHhccceeEEecCCC
Confidence 678999998776632 26788999999998665 4553
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=94.49 E-value=0.062 Score=44.23 Aligned_cols=43 Identities=19% Similarity=0.066 Sum_probs=34.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWAS 62 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~ 62 (420)
-+|+|+|+ |.+|..+++.+...+ .+|++.++++++++. .++++
T Consensus 29 ~~VlV~Ga-G~vG~~~~~~ak~~G-------~~Vi~~~~~~~~~~~-a~~~G 71 (166)
T d1llua2 29 QWVAISGI-GGLGHVAVQYARAMG-------LHVAAIDIDDAKLEL-ARKLG 71 (166)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT-------CEEEEEESCHHHHHH-HHHTT
T ss_pred CEEEEeec-cccHHHHHHHHHHcC-------CccceecchhhHHHh-hhccC
Confidence 46899886 899999888776666 789999999999854 45554
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=94.41 E-value=0.011 Score=50.36 Aligned_cols=95 Identities=22% Similarity=0.290 Sum_probs=53.6
Q ss_pred ceEEEE-cCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHH---HHHhCCCCCCCccEEEEe---CCCH-HHH
Q 014694 11 FDVIIL-GASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQA---LQWASPSHSLSIPILTAD---TTDP-PSL 82 (420)
Q Consensus 11 ~~IvV~-GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~---~~~l~~~~~~~~~~i~~D---~~d~-~sl 82 (420)
-+++|. ||+|.+|..+++.....+ .+++++.|+.++.++. +++++. + .++.-| ..+. +.+
T Consensus 30 ~~vli~~ga~g~vG~~aiqlAk~~G-------a~vI~~v~~~~~~~~~~~~~~~lGa----d-~vi~~~~~~~~~~~~~v 97 (189)
T d1gu7a2 30 KDWFIQNGGTSAVGKYASQIGKLLN-------FNSISVIRDRPNLDEVVASLKELGA----T-QVITEDQNNSREFGPTI 97 (189)
T ss_dssp TCEEEESCTTSHHHHHHHHHHHHHT-------CEEEEEECCCTTHHHHHHHHHHHTC----S-EEEEHHHHHCGGGHHHH
T ss_pred CEEEEEeCCCchHHHHHHHHHhhcC-------CeEEEEEecccccchHHhhhhhccc----c-EEEeccccchhHHHHHH
Confidence 357775 899999999998877777 7888888776655433 345541 1 122211 1111 122
Q ss_pred HHHH----hccCeeEeccCCCCCCcHHHHHHHHHcCCcEEec
Q 014694 83 HRLC----SQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDI 120 (420)
Q Consensus 83 ~~~~----~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdi 120 (420)
.++. .++|+||+++|... ....++.. +.+-++|.+
T Consensus 98 ~~~~~~~g~~vdvv~D~vg~~~--~~~~~~~l-~~~G~~v~~ 136 (189)
T d1gu7a2 98 KEWIKQSGGEAKLALNCVGGKS--STGIARKL-NNNGLMLTY 136 (189)
T ss_dssp HHHHHHHTCCEEEEEESSCHHH--HHHHHHTS-CTTCEEEEC
T ss_pred HHHHhhccCCceEEEECCCcch--hhhhhhhh-cCCcEEEEE
Confidence 3332 24899999987422 13333332 334456654
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=94.31 E-value=0.069 Score=43.33 Aligned_cols=37 Identities=19% Similarity=0.221 Sum_probs=32.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRV 54 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl 54 (420)
.+|.|+|+.|.+|+.+++.|.+.+ ++|.+.+|+....
T Consensus 10 ~kI~iIGg~G~mG~~la~~L~~~G-------~~V~~~d~~~~~~ 46 (152)
T d2pv7a2 10 HKIVIVGGYGKLGGLFARYLRASG-------YPISILDREDWAV 46 (152)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTT-------CCEEEECTTCGGG
T ss_pred CeEEEEcCCCHHHHHHHHHHHHcC-------CCcEecccccccc
Confidence 379999999999999999999988 8999999976543
|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glycine oxidase ThiO species: Bacillus sp. [TaxId: 1409]
Probab=94.23 E-value=0.019 Score=51.00 Aligned_cols=37 Identities=19% Similarity=0.325 Sum_probs=32.8
Q ss_pred CCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh
Q 014694 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP 51 (420)
Q Consensus 7 ~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~ 51 (420)
|.+.+||+|+|| |.+|..+|.+|++++ .+|+++.|+.
T Consensus 1 m~~~~DvvIIGa-Gi~Gls~A~~La~~G-------~~V~vlE~~~ 37 (276)
T d1ryia1 1 MKRHYEAVVIGG-GIIGSAIAYYLAKEN-------KNTALFESGT 37 (276)
T ss_dssp CCSEEEEEEECC-SHHHHHHHHHHHHTT-------CCEEEECSSS
T ss_pred CCccCCEEEECc-CHHHHHHHHHHHHCC-------CcEEEEeCCC
Confidence 456799999997 999999999999998 7999999864
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=94.17 E-value=0.1 Score=43.49 Aligned_cols=73 Identities=10% Similarity=0.035 Sum_probs=48.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCH----HHHHHHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDP----PSLHRLC 86 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~----~sl~~~~ 86 (420)
-.|+|+|+ |.+|...++.+...+. .+|++++++++|++ +.++++. .. ..|..+. +.+.+..
T Consensus 29 ~~VlV~Ga-GgvGl~a~~~ak~~G~------~~Vi~~d~~~~kl~-~a~~lGa------~~-~i~~~~~d~~~~~~~~~~ 93 (174)
T d1p0fa2 29 STCAVFGL-GGVGFSAIVGCKAAGA------SRIIGVGTHKDKFP-KAIELGA------TE-CLNPKDYDKPIYEVICEK 93 (174)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTC------SEEEEECSCGGGHH-HHHHTTC------SE-EECGGGCSSCHHHHHHHH
T ss_pred CEEEEECC-CchhHHHHHHHHHcCC------ceeeccCChHHHHH-HHHHcCC------cE-EEcCCCchhHHHHHHHHh
Confidence 36999986 8999999999988872 58999999999995 4555642 21 1232221 2222222
Q ss_pred --hccCeeEeccCC
Q 014694 87 --SQTKLLLNCVGP 98 (420)
Q Consensus 87 --~~~dvVIn~aGp 98 (420)
.+.|+||.++|.
T Consensus 94 ~~~G~d~vid~~g~ 107 (174)
T d1p0fa2 94 TNGGVDYAVECAGR 107 (174)
T ss_dssp TTSCBSEEEECSCC
T ss_pred cCCCCcEEEEcCCC
Confidence 257888888874
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=94.16 E-value=0.3 Score=39.91 Aligned_cols=46 Identities=24% Similarity=0.179 Sum_probs=36.0
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceE--EEEecChhHHHHHHHHhC
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSL--ALAGRNPTRVKQALQWAS 62 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v--~iagRs~~kl~~~~~~l~ 62 (420)
+|.|+|+||-||+...+-+.++. +. ++| ..+++|-+++.+...++.
T Consensus 3 ~I~IlGsTGSIG~~tL~Vi~~~~-d~----f~v~~Lsa~~N~~~L~~q~~~f~ 50 (151)
T d1q0qa2 3 QLTILGSTGSIGCSTLDVVRHNP-EH----FRVVALVAGKNVTRMVEQCLEFS 50 (151)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCT-TT----EEEEEEEESSCHHHHHHHHHHHC
T ss_pred eEEEEcCCcHHHHHHHHHHHhCC-CC----cEEEEEEecCcHHHHHHHHHHHh
Confidence 59999999999999998877653 22 555 446688888888888775
|
| >d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM0312 species: Thermotoga maritima [TaxId: 2336]
Probab=94.14 E-value=0.11 Score=43.55 Aligned_cols=104 Identities=13% Similarity=0.159 Sum_probs=65.9
Q ss_pred CcceEEEEcCCcHHHHHH-HHHHHHhCCCCCCCcceE-EEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 014694 9 ELFDVIILGASGFTGKYV-VREALKLFNFPSSPIKSL-ALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~v-a~~L~~~~~~~~~~~~~v-~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
++++|.|+|. |.+|+.+ +..+.+... ..++ .+.+|+.++.+.+.+..+ ...+ ..| +++++
T Consensus 2 kkirigiIG~-G~~g~~~h~~~l~~~~~-----~~~i~~v~d~~~~~~~~~~~~~~------~~~~---~~~---~~ell 63 (181)
T d1zh8a1 2 RKIRLGIVGC-GIAARELHLPALKNLSH-----LFEITAVTSRTRSHAEEFAKMVG------NPAV---FDS---YEELL 63 (181)
T ss_dssp CCEEEEEECC-SHHHHHTHHHHHHTTTT-----TEEEEEEECSSHHHHHHHHHHHS------SCEE---ESC---HHHHH
T ss_pred CCcEEEEEcC-CHHHHHHHHHHHHhCCC-----CeEEEEEEeccHhhhhhhhcccc------ccce---eee---eeccc
Confidence 4689999985 8899864 555554331 1454 578999999988887764 1111 123 55666
Q ss_pred h--ccCeeEeccCCCCCCcHHHHHHHHHcCCc-EEe--cCCcHHHHHHHHH
Q 014694 87 S--QTKLLLNCVGPYRLHGDPVAAACVHSGCD-YLD--ISGEPEFMERMEA 132 (420)
Q Consensus 87 ~--~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~-yvd--isge~~~~~~~~~ 132 (420)
+ +.|+|+-|.-+.. ...++..|.++|.| +++ ++-...=.+++.+
T Consensus 64 ~~~~id~v~I~tp~~~--h~~~~~~al~~gk~V~~EKPl~~~~~e~~~l~~ 112 (181)
T d1zh8a1 64 ESGLVDAVDLTLPVEL--NLPFIEKALRKGVHVICEKPISTDVETGKKVVE 112 (181)
T ss_dssp HSSCCSEEEECCCGGG--HHHHHHHHHHTTCEEEEESSSSSSHHHHHHHHH
T ss_pred cccccceeeccccccc--cccccccccccchhhhcCCCCcCCHHHHHHHHH
Confidence 5 5788887665433 36888899999998 443 3344444444444
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=94.00 E-value=0.15 Score=41.77 Aligned_cols=94 Identities=14% Similarity=0.091 Sum_probs=57.2
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccCe
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKL 91 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~dv 91 (420)
+|.|+|. |.+|..+++.|.+.+. ..+|...+||++.++...+. + .+....-+. + .....++|+
T Consensus 3 ~I~IIG~-G~mG~sla~~L~~~g~-----~~~I~~~D~~~~~~~~a~~~-~-----~~~~~~~~~---~--~~~~~~~dl 65 (171)
T d2g5ca2 3 NVLIVGV-GFMGGSFAKSLRRSGF-----KGKIYGYDINPESISKAVDL-G-----IIDEGTTSI---A--KVEDFSPDF 65 (171)
T ss_dssp EEEEESC-SHHHHHHHHHHHHTTC-----CSEEEEECSCHHHHHHHHHT-T-----SCSEEESCG---G--GGGGTCCSE
T ss_pred EEEEEcc-CHHHHHHHHHHHhcCC-----CeEEEEEECChHHHHHHHHh-h-----cchhhhhhh---h--hhhcccccc
Confidence 5999985 9999999999998873 26888899999988766542 1 112111111 1 122346899
Q ss_pred eEeccCCCCCCcHHHHHHHHH---cCCcEEecCCcH
Q 014694 92 LLNCVGPYRLHGDPVAAACVH---SGCDYLDISGEP 124 (420)
Q Consensus 92 VIn~aGp~~~~~~~vv~Ac~~---~g~~yvdisge~ 124 (420)
||-|+-|... .++++.... .++-.+|+++.-
T Consensus 66 Iila~p~~~~--~~vl~~l~~~~~~~~ii~d~~s~k 99 (171)
T d2g5ca2 66 VMLSSPVRTF--REIAKKLSYILSEDATVTDQGSVK 99 (171)
T ss_dssp EEECSCHHHH--HHHHHHHHHHSCTTCEEEECCSCC
T ss_pred ccccCCchhh--hhhhhhhhcccccccccccccccc
Confidence 9888754221 333333322 233466666543
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=93.99 E-value=0.054 Score=43.27 Aligned_cols=72 Identities=15% Similarity=0.193 Sum_probs=46.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEE-EecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLAL-AGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~i-agRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
|+|.|.|++|-.|+.+++.+.+.+ +++.. .+++... + +.++
T Consensus 1 mki~i~G~~GrMG~~i~~~~~~~~-------~~l~~~id~~~~~---------------------~----------~~~~ 42 (128)
T d1vm6a3 1 MKYGIVGYSGRMGQEIQKVFSEKG-------HELVLKVDVNGVE---------------------E----------LDSP 42 (128)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEEETTEEE---------------------E----------CSCC
T ss_pred CEEEEECCCCHHHHHHHHHHhcCC-------CeEEEEECCCcHH---------------------H----------hccC
Confidence 689999999999999988776665 45543 2322110 1 1246
Q ss_pred CeeEeccCCCCCCcHHHHHHHHHcCCcEEe-cCC
Q 014694 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLD-ISG 122 (420)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvd-isg 122 (420)
||||-..-|-.. ...++.|.+++++.|- .||
T Consensus 43 DVvIDFS~p~~~--~~~l~~~~~~~~p~ViGTTG 74 (128)
T d1vm6a3 43 DVVIDFSSPEAL--PKTVDLCKKYRAGLVLGTTA 74 (128)
T ss_dssp SEEEECSCGGGH--HHHHHHHHHHTCEEEECCCS
T ss_pred CEEEEecCHHHH--HHHHHHHHhcCCCEEEEcCC
Confidence 777766655332 5777888888887544 344
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=93.91 E-value=0.14 Score=39.44 Aligned_cols=86 Identities=12% Similarity=0.028 Sum_probs=57.5
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh-HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT-RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~-kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
..+|+|+|+ |-+|..-++.|++.+ .+|.+.....+ .+..+.+ ..++.++.-+..+ ++ +.+
T Consensus 12 ~k~vlVvG~-G~va~~ka~~ll~~g-------a~v~v~~~~~~~~~~~~~~------~~~i~~~~~~~~~-~d----l~~ 72 (113)
T d1pjqa1 12 DRDCLIVGG-GDVAERKARLLLEAG-------ARLTVNALTFIPQFTVWAN------EGMLTLVEGPFDE-TL----LDS 72 (113)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTT-------BEEEEEESSCCHHHHHHHT------TTSCEEEESSCCG-GG----GTT
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCC-------CeEEEEeccCChHHHHHHh------cCCceeeccCCCH-HH----hCC
Confidence 347999987 889999999999998 78887776543 2322222 2356666655543 22 457
Q ss_pred cCeeEeccCCCCCCcHHHHHHHHHcCC
Q 014694 89 TKLLLNCVGPYRLHGDPVAAACVHSGC 115 (420)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~Ac~~~g~ 115 (420)
+++|+.+.+-- .....+.+.|.+.|+
T Consensus 73 ~~lv~~at~d~-~~n~~i~~~a~~~~i 98 (113)
T d1pjqa1 73 CWLAIAATDDD-TVNQRVSDAAESRRI 98 (113)
T ss_dssp CSEEEECCSCH-HHHHHHHHHHHHTTC
T ss_pred CcEEeecCCCH-HHHHHHHHHHHHcCC
Confidence 88888776432 224677888888776
|
| >d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM1727 species: Thermotoga maritima [TaxId: 2336]
Probab=93.77 E-value=0.0045 Score=50.87 Aligned_cols=62 Identities=11% Similarity=0.142 Sum_probs=38.7
Q ss_pred EEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccCeeEe
Q 014694 15 ILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKLLLN 94 (420)
Q Consensus 15 V~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~dvVIn 94 (420)
++| +|.+|+.+++.|.+.+ ....+.+|+.++++++.++... . ..+ +.++++++|+||-
T Consensus 4 fIG-~G~mg~~l~~~L~~~~-------~~~~v~~R~~~~~~~l~~~~~~----~----~~~------~~~~~~~~DiVil 61 (153)
T d2i76a2 4 FVG-TGTLTRFFLECLKDRY-------EIGYILSRSIDRARNLAEVYGG----K----AAT------LEKHPELNGVVFV 61 (153)
T ss_dssp EES-CCHHHHHHHHTTC-----------CCCEECSSHHHHHHHHHHTCC----C----CCS------SCCCCC---CEEE
T ss_pred EEe-CcHHHHHHHHHHHhCC-------CEEEEEeCChhhhcchhhcccc----c----ccc------hhhhhccCcEEEE
Confidence 454 6999999999886543 2235789999999999887641 0 011 2234667899998
Q ss_pred ccCC
Q 014694 95 CVGP 98 (420)
Q Consensus 95 ~aGp 98 (420)
|+-+
T Consensus 62 ~v~d 65 (153)
T d2i76a2 62 IVPD 65 (153)
T ss_dssp CSCT
T ss_pred eccc
Confidence 8854
|
| >d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=93.34 E-value=0.05 Score=45.82 Aligned_cols=99 Identities=17% Similarity=0.139 Sum_probs=64.2
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceE-EEEecChhHHHHHHHHhCCCCCCCccEEEEe-----------CC
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNPTRVKQALQWASPSHSLSIPILTAD-----------TT 77 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v-~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D-----------~~ 77 (420)
.++|-|-| .|-||+.+++.+.++.+ .++ .+-+.++......+...+ ......+ +.
T Consensus 2 ~irIaING-fGRIGR~v~Ral~~~~d------ieiVaINd~~~~~~~~~l~~~~------~~~~~~~~~~~~~~~~~~~~ 68 (172)
T d2czca2 2 KVKVGVNG-YGTIGKRVAYAVTKQDD------MELIGITKTKPDFEAYRAKELG------IPVYAASEEFIPRFEKEGFE 68 (172)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHTCTT------EEEEEEEESSCSHHHHHHHHTT------CCEEESSGGGHHHHHHHTCC
T ss_pred cEEEEEEC-CCHHHHHHHHHHHhCCC------ceEEEEecCCChHHHHHhhhcC------ceeecccccceeeecccCcc
Confidence 36899988 59999999999977642 555 455555443323333221 1222211 11
Q ss_pred CHHHHHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCc
Q 014694 78 DPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGE 123 (420)
Q Consensus 78 d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge 123 (420)
....+..+..++|+||-|.|.|.. ..-.+...++|++.|.++++
T Consensus 69 ~~~~~~~~~~~vDvViEcTG~f~~--~~~~~~hl~~G~k~Vi~s~~ 112 (172)
T d2czca2 69 VAGTLNDLLEKVDIIVDATPGGIG--AKNKPLYEKAGVKAIFQGGE 112 (172)
T ss_dssp CSCBHHHHHTTCSEEEECCSTTHH--HHHHHHHHHHTCEEEECTTS
T ss_pred ccchhhhhhccCCEEEECCCCCCC--HHHHHHHHHcCCCEEEECCC
Confidence 122455566789999999998764 45567788999999998875
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.23 E-value=0.072 Score=45.46 Aligned_cols=41 Identities=15% Similarity=0.247 Sum_probs=35.7
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHH
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQW 60 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~ 60 (420)
+|.|+|| |.+|+.++..++..| ++|.+.+++++.+++..+.
T Consensus 6 kvaViGa-G~mG~~iA~~~a~~G-------~~V~l~D~~~~~l~~a~~~ 46 (192)
T d1f0ya2 6 HVTVIGG-GLMGAGIAQVAAATG-------HTVVLVDQTEDILAKSKKG 46 (192)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTT-------CEEEEECSCHHHHHHHHHH
T ss_pred EEEEECc-CHHHHHHHHHHHhCC-------CcEEEEECChHHHHHHHhh
Confidence 7999998 999999999999998 8999999999877655443
|
| >d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Alpha-glucosidase AglA species: Thermotoga maritima [TaxId: 2336]
Probab=92.93 E-value=0.1 Score=43.57 Aligned_cols=80 Identities=15% Similarity=0.140 Sum_probs=48.9
Q ss_pred cceEEEEcCCcHHHHH--HHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC---CCCCCccEEEEeCCCHHHHHH
Q 014694 10 LFDVIILGASGFTGKY--VVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP---SHSLSIPILTADTTDPPSLHR 84 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~--va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~---~~~~~~~~i~~D~~d~~sl~~ 84 (420)
.|+|.|+|| |.+|.. ++..|+.... . ...++++.++++++++.....+.. .......+... +| .++
T Consensus 2 ~mKI~iIGa-Gsvg~t~~~~~~l~~~~~--l-~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~--td---~~e 72 (171)
T d1obba1 2 SVKIGIIGA-GSAVFSLRLVSDLCKTPG--L-SGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKT--MN---LDD 72 (171)
T ss_dssp CCEEEEETT-TCHHHHHHHHHHHHTCGG--G-TTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEE--SC---HHH
T ss_pred CcEEEEECC-CHHHhHHHHHHHHHhccc--c-CCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEe--CC---hhh
Confidence 589999997 777754 3444554321 0 014899999999987654332211 01123333322 23 667
Q ss_pred HHhccCeeEeccCC
Q 014694 85 LCSQTKLLLNCVGP 98 (420)
Q Consensus 85 ~~~~~dvVIn~aGp 98 (420)
.++++|+||++++.
T Consensus 73 aL~dad~Vv~~~~~ 86 (171)
T d1obba1 73 VIIDADFVINTAMV 86 (171)
T ss_dssp HHTTCSEEEECCCT
T ss_pred cccCCCeEeeeccc
Confidence 88999999999875
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=92.88 E-value=0.16 Score=40.88 Aligned_cols=76 Identities=17% Similarity=0.166 Sum_probs=49.7
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEE-EecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLAL-AGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~i-agRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
+|.|.|++|-+|+.+++.+.+... +++.. .++. +.+..+ ...++|
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~~~------~~l~~~~d~~-~~~~~~---------------------------~~~~~D 46 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAADD------LTLSAELDAG-DPLSLL---------------------------TDGNTE 46 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTT------SEEEEEECTT-CCTHHH---------------------------HTTTCS
T ss_pred CEEEECCCCHHHHHHHHHHHhCCC------CEEEEEEecC-Cchhhh---------------------------ccccCC
Confidence 689999999999999999887652 55543 2221 111000 113578
Q ss_pred eeEeccCCCCCCcHHHHHHHHHcCCcEEe-cCCc
Q 014694 91 LLLNCVGPYRLHGDPVAAACVHSGCDYLD-ISGE 123 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~Ac~~~g~~yvd-isge 123 (420)
+||-..-|-.. ...++.|.++|++.|- .||-
T Consensus 47 vvIDFS~p~~~--~~~~~~~~~~~~~~ViGTTG~ 78 (135)
T d1yl7a1 47 VVIDFTHPDVV--MGNLEFLIDNGIHAVVGTTGF 78 (135)
T ss_dssp EEEECCCTTTH--HHHHHHHHHTTCEEEECCCCC
T ss_pred EEEEcccHHHH--HHHHHHHHhcCCCEEEecccc
Confidence 88887766432 6778899999998654 3443
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=92.68 E-value=0.12 Score=42.61 Aligned_cols=73 Identities=16% Similarity=0.217 Sum_probs=46.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCH----HHHHHHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDP----PSLHRLC 86 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~----~sl~~~~ 86 (420)
-.|+|+|+ |.+|...+..+...+. .+|++.+++++|++ ...+++. . . ..|..+. +.+.+..
T Consensus 30 ~~VlI~G~-Gg~g~~~~~~~~~~g~------~~Vi~~~~~~~rl~-~a~~~GA----d-~--~in~~~~~~~~~~~~~~~ 94 (175)
T d1cdoa2 30 STCAVFGL-GAVGLAAVMGCHSAGA------KRIIAVDLNPDKFE-KAKVFGA----T-D--FVNPNDHSEPISQVLSKM 94 (175)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC------SEEEEECSCGGGHH-HHHHTTC----C-E--EECGGGCSSCHHHHHHHH
T ss_pred CEEEEEec-CCccchHHHHHHHHhh------chheeecchHHHHH-HHHHcCC----c-E--EEcCCCcchhHHHHHHhh
Confidence 36889987 5578888887777762 68999999999985 4555642 1 1 2232221 2333333
Q ss_pred --hccCeeEeccCC
Q 014694 87 --SQTKLLLNCVGP 98 (420)
Q Consensus 87 --~~~dvVIn~aGp 98 (420)
.+.|+||.++|.
T Consensus 95 ~~~G~d~vid~~G~ 108 (175)
T d1cdoa2 95 TNGGVDFSLECVGN 108 (175)
T ss_dssp HTSCBSEEEECSCC
T ss_pred ccCCcceeeeecCC
Confidence 257888888874
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=92.33 E-value=0.11 Score=42.43 Aligned_cols=71 Identities=10% Similarity=0.010 Sum_probs=45.4
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCH---HHHHHHHh
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDP---PSLHRLCS 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~---~sl~~~~~ 87 (420)
-+|+|.|+ |-+|...++.+...+ .+|.+++++++|++. .++++ ...+ .|..+. +.+.+...
T Consensus 29 ~~vlv~G~-G~iG~~a~~~a~~~g-------~~v~~~~~~~~r~~~-~k~~G------a~~~-~~~~~~~~~~~~~~~~~ 92 (168)
T d1rjwa2 29 EWVAIYGI-GGLGHVAVQYAKAMG-------LNVVAVDIGDEKLEL-AKELG------ADLV-VNPLKEDAAKFMKEKVG 92 (168)
T ss_dssp CEEEEECC-STTHHHHHHHHHHTT-------CEEEEECSCHHHHHH-HHHTT------CSEE-ECTTTSCHHHHHHHHHS
T ss_pred CEEEEeec-ccchhhhhHHHhcCC-------CeEeccCCCHHHhhh-hhhcC------ccee-cccccchhhhhcccccC
Confidence 36888875 889999888777766 689999999999864 45564 2222 233332 33444445
Q ss_pred ccCeeEeccC
Q 014694 88 QTKLLLNCVG 97 (420)
Q Consensus 88 ~~dvVIn~aG 97 (420)
+.+.+|-+++
T Consensus 93 ~~~~~v~~~~ 102 (168)
T d1rjwa2 93 GVHAAVVTAV 102 (168)
T ss_dssp SEEEEEESSC
T ss_pred CCceEEeecC
Confidence 5555555554
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=92.24 E-value=0.091 Score=44.48 Aligned_cols=41 Identities=20% Similarity=0.260 Sum_probs=35.7
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHH
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQW 60 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~ 60 (420)
+|.|+|| |.+|+.++..++.+| ++|.+.+++++.+++..+.
T Consensus 6 ~vaViGa-G~mG~~iA~~~a~~G-------~~V~l~D~~~~~l~~~~~~ 46 (186)
T d1wdka3 6 QAAVLGA-GIMGGGIAYQSASKG-------TPILMKDINEHGIEQGLAE 46 (186)
T ss_dssp SEEEECC-HHHHHHHHHHHHHTT-------CCEEEECSSHHHHHHHHHH
T ss_pred EEEEECc-CHHHHHHHHHHHhCC-------CeEEEEECCHHHHhhhhhh
Confidence 5999998 999999999999998 8999999999887665543
|
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: UBA3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.04 E-value=0.086 Score=50.75 Aligned_cols=92 Identities=9% Similarity=0.079 Sum_probs=54.9
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC-------------------hhHHHHHHHHhCCCCCCCcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASPSHSLSIP 70 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs-------------------~~kl~~~~~~l~~~~~~~~~ 70 (420)
..+|+|.|+ |.+|..+++.|+..|- -++.+++.+ ..|.+.+.+.+.. ..+.++
T Consensus 37 ~~kVlvvG~-GglG~ei~k~L~~~Gv------g~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~-~np~v~ 108 (426)
T d1yovb1 37 TCKVLVIGA-GGLGCELLKNLALSGF------RQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLND-RVPNCN 108 (426)
T ss_dssp HCCEEEECS-STTHHHHHHHHHTTTC------CCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHH-HSTTCC
T ss_pred cCeEEEECC-CHHHHHHHHHHHHcCC------CeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHh-hCCCCc
Confidence 347999998 5599999999999873 367777743 1244333333321 012333
Q ss_pred E--EEEeCCCHHHHHHHHhccCeeEeccCCCCCCcHHHHHHHHH
Q 014694 71 I--LTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVH 112 (420)
Q Consensus 71 ~--i~~D~~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~ 112 (420)
+ +..++.+. -...++++|+||+|...+.. ...+-++|..
T Consensus 109 i~~~~~~i~~~--~~~~~~~~DlVi~~~Dn~~a-R~~in~~c~~ 149 (426)
T d1yovb1 109 VVPHFNKIQDF--NDTFYRQFHIIVCGLDSIIA-RRWINGMLIS 149 (426)
T ss_dssp CEEECSCGGGB--CHHHHTTCSEEEECCSCHHH-HHHHHHHHHH
T ss_pred eEeeeccccch--HHHHHHhcchheeccCcHHH-HHHHHHHHHH
Confidence 3 33334332 24678999999999875321 1333455653
|
| >d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Transcriptional repressor Rex, C-terminal domain domain: Transcriptional repressor Rex, C-terminal domain species: Thermus aquaticus [TaxId: 271]
Probab=91.94 E-value=0.059 Score=42.83 Aligned_cols=87 Identities=16% Similarity=0.046 Sum_probs=53.4
Q ss_pred CCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceE-EEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 014694 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 8 ~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v-~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
+|+++|+|+|| |.+|+.+++++..+. .+++ +..+-++++.-. . ..+++++ + .+.+.++.
T Consensus 1 ~~~~~v~I~Ga-G~~G~~l~~~l~~~~------~~~iv~fiDdd~~k~G~---~-----I~Gi~V~--~---~~~l~~~~ 60 (126)
T d2dt5a2 1 NRKWGLCIVGM-GRLGSALADYPGFGE------SFELRGFFDVDPEKVGR---P-----VRGGVIE--H---VDLLPQRV 60 (126)
T ss_dssp TSCEEEEEECC-SHHHHHHHHCSCCCS------SEEEEEEEESCTTTTTC---E-----ETTEEEE--E---GGGHHHHS
T ss_pred CCCceEEEEcC-CHHHHHHHHhHhhcC------CcEEEEEEeCchHhcCC---E-----ECCEEEe--c---HHHHHHHH
Confidence 36789999997 999999998865432 1665 445556555311 0 1233433 2 34566666
Q ss_pred hc-cCeeEeccCCCCCCcHHHHHHHHHcCCc
Q 014694 87 SQ-TKLLLNCVGPYRLHGDPVAAACVHSGCD 116 (420)
Q Consensus 87 ~~-~dvVIn~aGp~~~~~~~vv~Ac~~~g~~ 116 (420)
++ .++++-++.. .....+++.|.++|++
T Consensus 61 ~~~i~iai~~i~~--~~~~~I~d~l~~~gIk 89 (126)
T d2dt5a2 61 PGRIEIALLTVPR--EAAQKAADLLVAAGIK 89 (126)
T ss_dssp TTTCCEEEECSCH--HHHHHHHHHHHHHTCC
T ss_pred hhcccEEEEeCCH--HHHHHHHHHHHHcCCC
Confidence 53 4555554432 2337789999999886
|
| >d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=91.91 E-value=0.1 Score=44.04 Aligned_cols=102 Identities=15% Similarity=0.101 Sum_probs=59.3
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEE-EecChhHHHHHHHHhCCCCC---CCcc-EEEEeCCCHHHHHHHH
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLAL-AGRNPTRVKQALQWASPSHS---LSIP-ILTADTTDPPSLHRLC 86 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~i-agRs~~kl~~~~~~l~~~~~---~~~~-~i~~D~~d~~sl~~~~ 86 (420)
+|-|-| .|.||+.+++.+.++.+ ++++. .++++......+........ .... +....+.-...+..+.
T Consensus 3 KVaING-fGRIGR~v~Ral~~~~d------ievVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~ 75 (178)
T d1b7go1 3 NVAVNG-YGTIGKRVADAIIKQPD------MKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLI 75 (178)
T ss_dssp EEEEEC-CSHHHHHHHHHHHTCTT------EEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHH
T ss_pred EEEEEC-CCHHHHHHHHHHHhCCC------CEEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhh
Confidence 688887 79999999999988652 66644 44544433232222111000 0000 0000011112355666
Q ss_pred hccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCC
Q 014694 87 SQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISG 122 (420)
Q Consensus 87 ~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisg 122 (420)
.++|+||-|.|.|. +..-.+.+.++|.+.|...+
T Consensus 76 ~~vDiViecTG~f~--~~e~a~~hl~~G~KvIi~~~ 109 (178)
T d1b7go1 76 KTSDIVVDTTPNGV--GAQYKPIYLQLQRNAIFQGG 109 (178)
T ss_dssp HHCSEEEECCSTTH--HHHHHHHHHHTTCEEEECTT
T ss_pred hcCCEEEECCCCcC--CHHHHHHHHHcCCEEEEECC
Confidence 78999999999764 35667888889987776543
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=91.87 E-value=0.11 Score=44.64 Aligned_cols=36 Identities=19% Similarity=0.221 Sum_probs=31.4
Q ss_pred CCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC
Q 014694 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN 50 (420)
Q Consensus 7 ~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs 50 (420)
+..+.+|+|+|| |..|..+|.+|++++ .+|.++.|+
T Consensus 3 ~~~~~kVvVIGa-GiaGl~~A~~L~~~G-------~~V~vier~ 38 (268)
T d1c0pa1 3 MHSQKRVVVLGS-GVIGLSSALILARKG-------YSVHILARD 38 (268)
T ss_dssp CCCSCEEEEECC-SHHHHHHHHHHHHTT-------CEEEEEESS
T ss_pred CCCCCcEEEECc-cHHHHHHHHHHHHCC-------CCEEEEeCC
Confidence 445568999998 999999999999998 799999985
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=91.39 E-value=0.83 Score=34.00 Aligned_cols=90 Identities=11% Similarity=0.099 Sum_probs=55.3
Q ss_pred CCCcceEEEEcCCcHHH-HHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 014694 7 IPELFDVIILGASGFTG-KYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 7 ~~~~~~IvV~GATG~~G-~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~ 85 (420)
+.+..+|-++|-.| +| ..+|+.|.+.| +.|...+++....-+.+.+. .+.+...+ +++.
T Consensus 5 ~~~~~~ihfiGigG-~GMs~LA~~L~~~G-------~~VsGSD~~~~~~~~~L~~~------Gi~v~~g~--~~~~---- 64 (96)
T d1p3da1 5 MRRVQQIHFIGIGG-AGMSGIAEILLNEG-------YQISGSDIADGVVTQRLAQA------GAKIYIGH--AEEH---- 64 (96)
T ss_dssp CTTCCEEEEETTTS-TTHHHHHHHHHHHT-------CEEEEEESCCSHHHHHHHHT------TCEEEESC--CGGG----
T ss_pred chhCCEEEEEEECH-HHHHHHHHHHHhCC-------CEEEEEeCCCChhhhHHHHC------CCeEEECC--cccc----
Confidence 34445677776533 44 55699999998 89999998755433333333 24443322 3332
Q ss_pred HhccCeeEeccCCCCCCcHHHHHHHHHcCCcEE
Q 014694 86 CSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYL 118 (420)
Q Consensus 86 ~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yv 118 (420)
+.+.|+||-..+. ....+-+.+|.+.|...+
T Consensus 65 i~~~d~vV~S~AI--~~~npel~~A~~~gipii 95 (96)
T d1p3da1 65 IEGASVVVVSSAI--KDDNPELVTSKQKRIPVI 95 (96)
T ss_dssp GTTCSEEEECTTS--CTTCHHHHHHHHTTCCEE
T ss_pred CCCCCEEEECCCc--CCCCHHHHHHHHcCCCEE
Confidence 3578888766553 334677888899988654
|
| >d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=91.24 E-value=0.17 Score=42.15 Aligned_cols=85 Identities=15% Similarity=0.130 Sum_probs=47.2
Q ss_pred cceEEEEcC-CcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhH--HHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHH
Q 014694 10 LFDVIILGA-SGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR--VKQALQWASP-SHSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 10 ~~~IvV~GA-TG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~k--l~~~~~~l~~-~~~~~~~~i~~D~~d~~sl~~~ 85 (420)
+++|.|+|| +.+++..++.-+..... . ...++.+.+.++++ ++.+-..... ....+..+.....+| ..+.
T Consensus 1 k~KI~iIGaGs~~~~~~~~~l~~~~~~--~-~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~~~td---~~~a 74 (169)
T d1s6ya1 1 RLKIATIGGGSSYTPELVEGLIKRYHE--L-PVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLD---RRRA 74 (169)
T ss_dssp CEEEEEETTTCTTHHHHHHHHHHTTTT--C-CEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESC---HHHH
T ss_pred CcEEEEECCChhhHHHHHHHHHHhccc--c-CCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceeeecCC---chhh
Confidence 478999997 33555666555554321 0 11488999998754 4332211000 000122333333344 3567
Q ss_pred HhccCeeEeccCCCC
Q 014694 86 CSQTKLLLNCVGPYR 100 (420)
Q Consensus 86 ~~~~dvVIn~aGp~~ 100 (420)
++++|+||+++|.-.
T Consensus 75 l~gaDvVv~ta~~~~ 89 (169)
T d1s6ya1 75 LDGADFVTTQFRVGG 89 (169)
T ss_dssp HTTCSEEEECCCTTH
T ss_pred cCCCCEEEEccccCC
Confidence 889999999999643
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.15 E-value=0.27 Score=40.72 Aligned_cols=69 Identities=10% Similarity=0.170 Sum_probs=50.0
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccCe
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKL 91 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~dv 91 (420)
.++|+| +|.+|+-+|+.+...+ .+|.+..+++-+. +...+. .. ....+++++..+|+
T Consensus 26 ~v~V~G-yG~iG~g~A~~~rg~G-------~~V~v~e~dp~~a--l~A~~d-----G~--------~v~~~~~a~~~adi 82 (163)
T d1li4a1 26 VAVVAG-YGDVGKGCAQALRGFG-------ARVIITEIDPINA--LQAAME-----GY--------EVTTMDEACQEGNI 82 (163)
T ss_dssp EEEEEC-CSHHHHHHHHHHHHTT-------CEEEEECSCHHHH--HHHHHT-----TC--------EECCHHHHTTTCSE
T ss_pred EEEEec-cccccHHHHHHHHhCC-------CeeEeeecccchh--HHhhcC-----ce--------EeeehhhhhhhccE
Confidence 577876 8999999999999988 8999999988542 222221 11 11237788899999
Q ss_pred eEeccCCCCCCc
Q 014694 92 LLNCVGPYRLHG 103 (420)
Q Consensus 92 VIn~aGp~~~~~ 103 (420)
||.+.|-.+...
T Consensus 83 vvtaTGn~~vI~ 94 (163)
T d1li4a1 83 FVTTTGCIDIIL 94 (163)
T ss_dssp EEECSSCSCSBC
T ss_pred EEecCCCccchh
Confidence 999998654433
|
| >d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Thermotoga maritima [TaxId: 2336]
Probab=90.94 E-value=0.21 Score=41.16 Aligned_cols=82 Identities=10% Similarity=0.144 Sum_probs=47.8
Q ss_pred ceEEEEcCCcHHHHHHH-HHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 11 FDVIILGASGFTGKYVV-REALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va-~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
|+|.|+|| |.+|...+ ..+++... .. ...++.+.+.++++++...+...........+. .. ++ ..+.++++
T Consensus 1 mKIaiIGa-Gs~g~~~~~~~l~~~~~-~~-~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~~-~t-~~---~~~~l~~a 72 (162)
T d1up7a1 1 MRIAVIGG-GSSYTPELVKGLLDISE-DV-RIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVL-IS-DT---FEGAVVDA 72 (162)
T ss_dssp CEEEEETT-TCTTHHHHHHHHHHHTT-TS-CCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEE-EC-SS---HHHHHTTC
T ss_pred CEEEEECC-CHHHHHHHHHHHHhccc-cc-CccEEEEEecCcHHHHHHHHHHHhhhccCceEE-Ee-cC---cccccCCC
Confidence 68999998 44555444 33444321 00 114799999999998754432211001122322 22 22 45778999
Q ss_pred CeeEeccCCCC
Q 014694 90 KLLLNCVGPYR 100 (420)
Q Consensus 90 dvVIn~aGp~~ 100 (420)
|+||+++|.-.
T Consensus 73 DvVVita~~~~ 83 (162)
T d1up7a1 73 KYVIFQFRPGG 83 (162)
T ss_dssp SEEEECCCTTH
T ss_pred CEEEEecccCC
Confidence 99999999643
|
| >d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Sarcosine oxidase species: Bacillus sp., strain b0618 [TaxId: 1409]
Probab=90.67 E-value=0.1 Score=46.16 Aligned_cols=33 Identities=30% Similarity=0.248 Sum_probs=30.2
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN 50 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs 50 (420)
.|||+|+|| |.+|..+|.+|++++ ++|+++.+.
T Consensus 3 ~yDvvIIGa-Gi~Gls~A~~La~~G-------~~V~viE~~ 35 (281)
T d2gf3a1 3 HFDVIVVGA-GSMGMAAGYQLAKQG-------VKTLLVDAF 35 (281)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHTT-------CCEEEECSS
T ss_pred cCCEEEECc-CHHHHHHHHHHHHCC-------CcEEEEeCC
Confidence 589999997 999999999999998 899999875
|
| >d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Ornithine cyclodeaminase-like domain: Ornithine cyclodeaminase species: Pseudomonas putida [TaxId: 303]
Probab=90.49 E-value=0.45 Score=44.10 Aligned_cols=98 Identities=10% Similarity=0.172 Sum_probs=67.1
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccCe
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKL 91 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~dv 91 (420)
.+.|+|+ |..++.-++.+.+..+ .-+|.+.+|++++.+++.+++.. ..++++..+ ++++++++++|+
T Consensus 130 ~l~iiG~-G~QA~~~~~a~~~v~~-----i~~V~v~~r~~~~~~~~~~~l~~--~~g~~v~~~-----~s~~eav~~ADI 196 (340)
T d1x7da_ 130 KMALIGN-GAQSEFQALAFHKHLG-----IEEIVAYDTDPLATAKLIANLKE--YSGLTIRRA-----SSVAEAVKGVDI 196 (340)
T ss_dssp EEEEECC-STTHHHHHHHHHHHSC-----CCEEEEECSSHHHHHHHHHHHTT--CTTCEEEEC-----SSHHHHHTTCSE
T ss_pred eEEEEcc-cHHHHHHHHHHhhhcc-----eeeeEEEecChHHHHHHHHhhhh--ccCCCceec-----CCHHHHHhcCCc
Confidence 6888875 8899988888877653 26899999999999999988852 335666555 347889999999
Q ss_pred eEeccCCCCCCcHHHH-HHHHHcCCcEEecCCcH
Q 014694 92 LLNCVGPYRLHGDPVA-AACVHSGCDYLDISGEP 124 (420)
Q Consensus 92 VIn~aGp~~~~~~~vv-~Ac~~~g~~yvdisge~ 124 (420)
|+.|...-. ..+++ ....+.|+|..-+.+..
T Consensus 197 i~t~Tas~s--~~Pv~~~~~l~pG~hI~aiGs~~ 228 (340)
T d1x7da_ 197 ITTVTADKA--YATIITPDMLEPGMHLNAVGGDC 228 (340)
T ss_dssp EEECCCCSS--EEEEECGGGCCTTCEEEECSCCB
T ss_pred eeeccccCC--CCcccchhhcCCCCEEeecccch
Confidence 987663210 01221 13456667666665443
|
| >d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=89.69 E-value=0.13 Score=43.62 Aligned_cols=34 Identities=24% Similarity=0.282 Sum_probs=30.8
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN 50 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs 50 (420)
++|||+|+|| |+.|...+.++++.+ .+|+++.++
T Consensus 1 k~yDvvVIG~-G~aG~~aA~~a~~~G-------~kV~iiE~~ 34 (217)
T d1gesa1 1 KHYDYIAIGG-GSGGIASINRAAMYG-------QKCALIEAK 34 (217)
T ss_dssp CEEEEEEECC-SHHHHHHHHHHHTTT-------CCEEEEESS
T ss_pred CcCCEEEECC-CHHHHHHHHHHHHCC-------CEEEEEecc
Confidence 5799999998 999999999999988 789999875
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=89.65 E-value=0.24 Score=38.14 Aligned_cols=35 Identities=9% Similarity=0.162 Sum_probs=30.2
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP 51 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~ 51 (420)
.+.+|+|+|| |++|-.+|..|.+.+ .+|.++.|..
T Consensus 21 ~p~~v~IiGg-G~ig~E~A~~l~~~G-------~~Vtlve~~~ 55 (117)
T d1ebda2 21 VPKSLVVIGG-GYIGIELGTAYANFG-------TKVTILEGAG 55 (117)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHTT-------CEEEEEESSS
T ss_pred cCCeEEEECC-Cccceeeeeeecccc-------cEEEEEEecc
Confidence 3458999997 999999999999998 7899988764
|
| >d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=89.36 E-value=0.11 Score=44.45 Aligned_cols=37 Identities=27% Similarity=0.308 Sum_probs=32.6
Q ss_pred CCCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC
Q 014694 6 QIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN 50 (420)
Q Consensus 6 ~~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs 50 (420)
+|+++|||+|+|| |-.|...+.++++.+ .+|+++.++
T Consensus 1 ~m~~~yDviVIG~-GpAGl~aA~~aa~~G-------~kV~lie~~ 37 (233)
T d1v59a1 1 TINKSHDVVIIGG-GPAGYVAAIKAAQLG-------FNTACVEKR 37 (233)
T ss_dssp CEEEEEEEEEECC-SHHHHHHHHHHHHTT-------CCEEEEESS
T ss_pred CCCcccCEEEECC-CHHHHHHHHHHHHCC-------CcEEEEEec
Confidence 3678899999997 999999999999988 799998864
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=89.25 E-value=0.19 Score=42.37 Aligned_cols=59 Identities=19% Similarity=0.095 Sum_probs=44.3
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
..+|.|+|. |-||+.+++.+...+ .+|...+|+.... ... -.++++++++++
T Consensus 42 gk~vgIiG~-G~IG~~va~~l~~~g-------~~v~~~d~~~~~~-------------~~~-------~~~~l~ell~~s 93 (181)
T d1qp8a1 42 GEKVAVLGL-GEIGTRVGKILAALG-------AQVRGFSRTPKEG-------------PWR-------FTNSLEEALREA 93 (181)
T ss_dssp TCEEEEESC-STHHHHHHHHHHHTT-------CEEEEECSSCCCS-------------SSC-------CBSCSHHHHTTC
T ss_pred CceEEEecc-ccccccceeeeeccc-------ccccccccccccc-------------cee-------eeechhhhhhcc
Confidence 447999985 889999999998887 7999998864321 011 113578999999
Q ss_pred CeeEecc
Q 014694 90 KLLLNCV 96 (420)
Q Consensus 90 dvVIn~a 96 (420)
|+|+.++
T Consensus 94 Div~~~~ 100 (181)
T d1qp8a1 94 RAAVCAL 100 (181)
T ss_dssp SEEEECC
T ss_pred chhhccc
Confidence 9998766
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Probab=88.96 E-value=0.54 Score=40.10 Aligned_cols=42 Identities=24% Similarity=0.298 Sum_probs=35.5
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHH
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQAL 58 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~ 58 (420)
+..+|+|-| -|.+|++++++|.+.| .+|.+.+.+.+++....
T Consensus 26 ~gk~v~IqG-~G~VG~~~A~~L~~~G-------akvvv~d~d~~~~~~~~ 67 (201)
T d1c1da1 26 DGLTVLVQG-LGAVGGSLASLAAEAG-------AQLLVADTDTERVAHAV 67 (201)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTT-------CEEEEECSCHHHHHHHH
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCC-------CEEEEecchHHHHHHHH
Confidence 345788887 6999999999999998 79999999988886654
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=88.93 E-value=0.33 Score=41.36 Aligned_cols=63 Identities=14% Similarity=0.025 Sum_probs=45.1
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
..+|.|+| .|.||+.+++.|..-+ .+|...++....... . . . ...++++++++++
T Consensus 43 gk~vgIiG-~G~IG~~va~~l~~fg-------~~V~~~d~~~~~~~~--~-~------~--------~~~~~l~~~l~~s 97 (197)
T d1j4aa1 43 DQVVGVVG-TGHIGQVFMQIMEGFG-------AKVITYDIFRNPELE--K-K------G--------YYVDSLDDLYKQA 97 (197)
T ss_dssp GSEEEEEC-CSHHHHHHHHHHHHTT-------CEEEEECSSCCHHHH--H-T------T--------CBCSCHHHHHHHC
T ss_pred CCeEEEec-ccccchhHHHhHhhhc-------ccccccCcccccccc--c-c------e--------eeecccccccccc
Confidence 45799997 5999999999998777 789888876543211 1 0 0 1124588899999
Q ss_pred CeeEeccC
Q 014694 90 KLLLNCVG 97 (420)
Q Consensus 90 dvVIn~aG 97 (420)
|+|+.++-
T Consensus 98 Dii~~~~p 105 (197)
T d1j4aa1 98 DVISLHVP 105 (197)
T ss_dssp SEEEECSC
T ss_pred ccccccCC
Confidence 99887663
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=88.85 E-value=1.5 Score=32.15 Aligned_cols=86 Identities=13% Similarity=0.128 Sum_probs=55.5
Q ss_pred ceEEEEcCCcHHHH-HHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 11 FDVIILGASGFTGK-YVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~-~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
|+|-++|-.| +|- .+|+.|.+.+ +.|...+++....-+.+++.+ +++... .+++. ++++
T Consensus 2 ~~ihfiGIgG-~GMs~LA~~L~~~G-------~~VsGSD~~~~~~t~~L~~~G------i~i~~g--h~~~~----i~~~ 61 (89)
T d1j6ua1 2 MKIHFVGIGG-IGMSAVALHEFSNG-------NDVYGSNIEETERTAYLRKLG------IPIFVP--HSADN----WYDP 61 (89)
T ss_dssp CEEEEETTTS-HHHHHHHHHHHHTT-------CEEEEECSSCCHHHHHHHHTT------CCEESS--CCTTS----CCCC
T ss_pred cEEEEEeECH-HHHHHHHHHHHhCC-------CeEEEEeCCCChhHHHHHHCC------CeEEee--ecccc----cCCC
Confidence 5677777544 443 5788888888 899999988755444455543 444332 23222 2568
Q ss_pred CeeEeccCCCCCCcHHHHHHHHHcCCcEE
Q 014694 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYL 118 (420)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~Ac~~~g~~yv 118 (420)
|+||-..+. ....+.+++|.+.|....
T Consensus 62 d~vV~SsAI--~~~npel~~A~~~gIpv~ 88 (89)
T d1j6ua1 62 DLVIKTPAV--RDDNPEIVRARMERVPIE 88 (89)
T ss_dssp SEEEECTTC--CTTCHHHHHHHHTTCCEE
T ss_pred CEEEEecCc--CCCCHHHHHHHHcCCCcc
Confidence 988766654 334678899999988643
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=88.27 E-value=0.36 Score=40.53 Aligned_cols=63 Identities=16% Similarity=0.103 Sum_probs=43.9
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
..++.|+| .|.||+.+++.+..-+ .+|...+|...+.+... .. +. ..+++++++++
T Consensus 44 ~k~vgiiG-~G~IG~~va~~~~~fg-------~~v~~~d~~~~~~~~~~--~~------~~--------~~~l~ell~~s 99 (184)
T d1ygya1 44 GKTVGVVG-LGRIGQLVAQRIAAFG-------AYVVAYDPYVSPARAAQ--LG------IE--------LLSLDDLLARA 99 (184)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHTTT-------CEEEEECTTSCHHHHHH--HT------CE--------ECCHHHHHHHC
T ss_pred ceeeeecc-ccchhHHHHHHhhhcc-------ceEEeecCCCChhHHhh--cC------ce--------eccHHHHHhhC
Confidence 34677877 5999999999987766 78988888765432221 11 11 13478899999
Q ss_pred CeeEecc
Q 014694 90 KLLLNCV 96 (420)
Q Consensus 90 dvVIn~a 96 (420)
|+|+.++
T Consensus 100 Div~~~~ 106 (184)
T d1ygya1 100 DFISVHL 106 (184)
T ss_dssp SEEEECC
T ss_pred CEEEEcC
Confidence 9987665
|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=88.15 E-value=0.63 Score=38.32 Aligned_cols=68 Identities=16% Similarity=0.193 Sum_probs=50.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
.+++|.| -|.+|+-+|+++...+ .+|.+...++-+ ++...+ ...+ -..++++++.+|
T Consensus 24 k~vvV~G-YG~vGrG~A~~~rg~G-------a~V~V~E~DPi~--alqA~m-----dGf~--------v~~~~~a~~~aD 80 (163)
T d1v8ba1 24 KIVVICG-YGDVGKGCASSMKGLG-------ARVYITEIDPIC--AIQAVM-----EGFN--------VVTLDEIVDKGD 80 (163)
T ss_dssp SEEEEEC-CSHHHHHHHHHHHHHT-------CEEEEECSCHHH--HHHHHT-----TTCE--------ECCHHHHTTTCS
T ss_pred CEEEEec-ccccchhHHHHHHhCC-------CEEEEEecCchh--hHHHHh-----cCCc--------cCchhHccccCc
Confidence 3678886 7999999999999998 799999998854 222222 1222 133678999999
Q ss_pred eeEeccCCCCC
Q 014694 91 LLLNCVGPYRL 101 (420)
Q Consensus 91 vVIn~aGp~~~ 101 (420)
++|.+.|-...
T Consensus 81 i~vTaTGn~~v 91 (163)
T d1v8ba1 81 FFITCTGNVDV 91 (163)
T ss_dssp EEEECCSSSSS
T ss_pred EEEEcCCCCcc
Confidence 99999986543
|
| >d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Galactose/lactose metabolism regulatory protein GAL80 species: Yeast (Kluyveromyces lactis) [TaxId: 28985]
Probab=88.04 E-value=0.96 Score=39.13 Aligned_cols=109 Identities=11% Similarity=0.075 Sum_probs=67.3
Q ss_pred CCCcceEEEEcCC---cHHHHHHHHHHHHhCCCCCCCcceE-EEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHH
Q 014694 7 IPELFDVIILGAS---GFTGKYVVREALKLFNFPSSPIKSL-ALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSL 82 (420)
Q Consensus 7 ~~~~~~IvV~GAT---G~~G~~va~~L~~~~~~~~~~~~~v-~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl 82 (420)
..++++|-|+|.. |++++.-+..+.+..+ .+++ ++++++.++.+++.++.+. ..... +.| +
T Consensus 13 ~~k~irvgiIG~G~~~~~~~~~h~~ai~~~~~-----~~~ivav~d~~~~~~~~~~~~~~~---~~~~~----~~~---~ 77 (237)
T d2nvwa1 13 SSRPIRVGFVGLTSGKSWVAKTHFLAIQQLSS-----QFQIVALYNPTLKSSLQTIEQLQL---KHATG----FDS---L 77 (237)
T ss_dssp GGCCEEEEEECCCSTTSHHHHTHHHHHHHTTT-----TEEEEEEECSCHHHHHHHHHHTTC---TTCEE----ESC---H
T ss_pred CCCCeEEEEEecCccccHHHHHHHHHHHhcCC-----CeEEEEEEcCCHHHHHHHHHhccc---cccee----ecc---h
Confidence 3577899999974 4576665566655432 1565 5789999999888887641 11111 223 5
Q ss_pred HHHHh--ccCeeEeccCCCCCCcHHHHHHHHHcCC------c-EEe--cCCcHHHHHHHHH
Q 014694 83 HRLCS--QTKLLLNCVGPYRLHGDPVAAACVHSGC------D-YLD--ISGEPEFMERMEA 132 (420)
Q Consensus 83 ~~~~~--~~dvVIn~aGp~~~~~~~vv~Ac~~~g~------~-yvd--isge~~~~~~~~~ 132 (420)
+++++ +.|+|+-|.-+... ..++..|.++|. | +|. ++-...=.+++++
T Consensus 78 ~~l~~~~~iD~V~i~tp~~~h--~~~~~~al~aG~~~~~~k~V~~EKPla~~~~e~~~l~~ 136 (237)
T d2nvwa1 78 ESFAQYKDIDMIVVSVKVPEH--YEVVKNILEHSSQNLNLRYLYVEWALAASVQQAEELYS 136 (237)
T ss_dssp HHHHHCTTCSEEEECSCHHHH--HHHHHHHHHHSSSCSSCCEEEEESSSSSSHHHHHHHHH
T ss_pred hhcccccccceeeccCCCcch--hhHHHHHHHhcccccCCceEEEeccccCCHHHHHHHHH
Confidence 55665 46777777644332 577788888874 4 444 3444444566655
|
| >d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=87.55 E-value=0.28 Score=41.28 Aligned_cols=35 Identities=31% Similarity=0.393 Sum_probs=31.1
Q ss_pred CCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC
Q 014694 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN 50 (420)
Q Consensus 8 ~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs 50 (420)
+++|||+|+|| |-.|...+.++++.+ .+|+++.+.
T Consensus 1 ~~kYDviIIGg-GpAGl~aA~~aar~G-------~~V~viE~~ 35 (229)
T d3lada1 1 SQKFDVIVIGA-GPGGYVAAIKSAQLG-------LKTALIEKY 35 (229)
T ss_dssp CCCCSEEEECC-SHHHHHHHHHHHHHT-------CCEEEEECC
T ss_pred CCcCCEEEECc-CHHHHHHHHHHHHCC-------CeEEEEecc
Confidence 46899999997 999999999999998 789998764
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=87.42 E-value=0.41 Score=37.23 Aligned_cols=34 Identities=21% Similarity=0.278 Sum_probs=29.4
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP 51 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~ 51 (420)
..+|+|.|| |++|-.+|..|.+.+ .+|.+..|+.
T Consensus 30 ~~~vvIIGg-G~iG~E~A~~l~~~g-------~~Vtli~~~~ 63 (121)
T d1d7ya2 30 QSRLLIVGG-GVIGLELAATARTAG-------VHVSLVETQP 63 (121)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTT-------CEEEEEESSS
T ss_pred CCeEEEECc-chhHHHHHHHhhccc-------ceEEEEeecc
Confidence 357999987 999999999999987 7899988864
|
| >d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Phenylacetone monooxygenase species: Thermobifida fusca [TaxId: 2021]
Probab=87.26 E-value=0.28 Score=44.43 Aligned_cols=38 Identities=34% Similarity=0.544 Sum_probs=32.7
Q ss_pred CCCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh
Q 014694 6 QIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP 51 (420)
Q Consensus 6 ~~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~ 51 (420)
...+++||+|+|| |..|-.++.+|.+.+ +++.|..++.
T Consensus 3 ~p~~~~dV~IIGA-G~sGl~~a~~L~~~G-------~~v~i~Ek~~ 40 (298)
T d1w4xa1 3 QPPEEVDVLVVGA-GFSGLYALYRLRELG-------RSVHVIETAG 40 (298)
T ss_dssp CCCSEEEEEEECC-SHHHHHHHHHHHHTT-------CCEEEECSSS
T ss_pred CCCCCCCEEEECc-cHHHHHHHHHHHhCC-------CCEEEEEcCC
Confidence 3456789999998 999999999999987 7899998864
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=87.22 E-value=0.36 Score=37.56 Aligned_cols=35 Identities=17% Similarity=0.169 Sum_probs=30.3
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP 51 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~ 51 (420)
.+.+++|+|| |++|-.++..|.+.+ .+|.++.|+.
T Consensus 22 ~p~~~vIiG~-G~ig~E~A~~l~~lG-------~~Vtii~~~~ 56 (122)
T d1v59a2 22 IPKRLTIIGG-GIIGLEMGSVYSRLG-------SKVTVVEFQP 56 (122)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHTT-------CEEEEECSSS
T ss_pred CCCeEEEECC-CchHHHHHHHHHhhC-------cceeEEEecc
Confidence 3458999997 999999999999998 7999998854
|
| >d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: Amyloid beta precursor protein-binding protein 1, APPBP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.22 E-value=0.58 Score=45.93 Aligned_cols=100 Identities=14% Similarity=0.123 Sum_probs=63.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh-------------------hHHHHHHHHhCCCCCCCccE
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-------------------TRVKQALQWASPSHSLSIPI 71 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~-------------------~kl~~~~~~l~~~~~~~~~~ 71 (420)
.+|+|+|+ |.+|..+++.|+..|- -++.+++.+. .|.+.+.+.+.. ..+.+.+
T Consensus 26 s~VlvvG~-gglG~Ei~knLvl~GV------g~itivD~d~v~~sdL~rqf~~~~~diGk~ka~~~~~~L~~-lNp~v~i 97 (529)
T d1yova1 26 AHVCLINA-TATGTEILKNLVLPGI------GSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQE-LNSDVSG 97 (529)
T ss_dssp CEEEECCC-SHHHHHHHHHHHTTTC------SEEEEECCSBCCHHHHHHCTTCCGGGTTSBHHHHHHHHHHT-TCTTSBC
T ss_pred CCEEEECC-CHHHHHHHHHHHHhcC------CEEEEEcCCcCChhhcCchhcCChhhCCCHHHHHHHHHHHH-hCCCCcE
Confidence 47999998 6699999999999873 4777776431 233333333321 1233443
Q ss_pred EEEeCCCHHHH----HHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEec
Q 014694 72 LTADTTDPPSL----HRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDI 120 (420)
Q Consensus 72 i~~D~~d~~sl----~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdi 120 (420)
...+. +.+++ ...+++.|+||.|..+... -..+-+.|.++++.+|+.
T Consensus 98 ~~~~~-~~~~~~~~~~~~~~~~dvVv~~~~~~~~-~~~l~~~c~~~~ip~i~~ 148 (529)
T d1yova1 98 SFVEE-SPENLLDNDPSFFCRFTVVVATQLPEST-SLRLADVLWNSQIPLLIC 148 (529)
T ss_dssp CEESS-CHHHHHHSCGGGGGGCSEEEEESCCHHH-HHHHHHHHHHHTCCEEEE
T ss_pred EEEcC-CchhhhhhHHHHhcCCCEEEECCCCHHH-HHHHHHHHHHcCCCEEEE
Confidence 33332 23332 2456789999998765432 256789999999887654
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=86.94 E-value=0.39 Score=36.93 Aligned_cols=34 Identities=21% Similarity=0.059 Sum_probs=29.6
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP 51 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~ 51 (420)
+.+|+|+|| |++|-.++..|.+.+ .+|.+..|..
T Consensus 21 p~~vvIiGg-G~ig~E~A~~l~~~G-------~~Vtlve~~~ 54 (116)
T d1gesa2 21 PERVAVVGA-GYIGVELGGVINGLG-------AKTHLFEMFD 54 (116)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTT-------CEEEEECSSS
T ss_pred CCEEEEECC-ChhhHHHHHHhhccc-------cEEEEEeecc
Confidence 457999987 999999999999987 7899998864
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=86.80 E-value=0.4 Score=37.07 Aligned_cols=33 Identities=15% Similarity=0.169 Sum_probs=29.2
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN 50 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs 50 (420)
+.+|+|+|| |++|-.++..|.+.+ .+|.+..|.
T Consensus 22 p~~v~IiGg-G~iG~E~A~~l~~~g-------~~Vtlv~~~ 54 (117)
T d1onfa2 22 SKKIGIVGS-GYIAVELINVIKRLG-------IDSYIFARG 54 (117)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHTTT-------CEEEEECSS
T ss_pred CCEEEEECC-chHHHHHHHHHHhcc-------ccceeeehh
Confidence 457999997 999999999999887 789999985
|
| >d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=86.77 E-value=0.38 Score=40.12 Aligned_cols=35 Identities=26% Similarity=0.351 Sum_probs=29.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP 51 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~ 51 (420)
|+|+|+|| |++|-.+|..|.+.++ ..+|.+..|+.
T Consensus 1 ~KVvIIGg-G~~G~e~A~~l~~~~~-----~~~V~v~~~~~ 35 (198)
T d1nhpa1 1 MKVIVLGS-SHGGYEAVEELLNLHP-----DAEIQWYEKGD 35 (198)
T ss_dssp CEEEEECS-SHHHHHHHHHHHHHCT-----TSEEEEEESSS
T ss_pred CEEEEECC-cHHHHHHHHHHHhcCC-----CCeEEEEeCCC
Confidence 68999997 8999999999998874 26888888753
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=86.74 E-value=0.36 Score=41.57 Aligned_cols=35 Identities=11% Similarity=0.122 Sum_probs=30.6
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP 51 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~ 51 (420)
...+|+|+|| |..|..++..|++++ ++|.+..|+.
T Consensus 3 ~~~kV~IiGa-G~aGl~~A~~L~~~G-------~~v~v~Er~~ 37 (265)
T d2voua1 3 TTDRIAVVGG-SISGLTAALMLRDAG-------VDVDVYERSP 37 (265)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHTT-------CEEEEECSSS
T ss_pred CCCcEEEECc-CHHHHHHHHHHHHCC-------CCEEEEeCCC
Confidence 3458999998 999999999999988 8999998864
|
| >d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Flavoprotein BC4706 species: Bacillus cereus [TaxId: 1396]
Probab=86.69 E-value=0.27 Score=42.39 Aligned_cols=35 Identities=23% Similarity=0.331 Sum_probs=31.2
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT 52 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~ 52 (420)
+|||+|+|| |..|...+..|++++ ++|.++.++..
T Consensus 2 ~yDViIIGa-G~aGl~aA~~la~~G-------~~V~liEk~~~ 36 (251)
T d2i0za1 2 HYDVIVIGG-GPSGLMAAIGAAEEG-------ANVLLLDKGNK 36 (251)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTT-------CCEEEECSSSS
T ss_pred cCCEEEECc-CHHHHHHHHHHHHCC-------CcEEEEeCCCC
Confidence 589999997 999999999999988 89999998753
|
| >d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Leucine dehydrogenase species: Bacillus sphaericus [TaxId: 1421]
Probab=86.69 E-value=0.3 Score=42.72 Aligned_cols=46 Identities=20% Similarity=0.133 Sum_probs=38.7
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhC
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWAS 62 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~ 62 (420)
...+|+|-| -|.+|++++++|.+.+ .++++.+.+..+++.+....+
T Consensus 38 ~g~~v~IqG-~GnVG~~~a~~L~~~G-------akvv~~d~~~~~~~~~~~~~g 83 (230)
T d1leha1 38 EGLAVSVQG-LGNVAKALCKKLNTEG-------AKLVVTDVNKAAVSAAVAEEG 83 (230)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTT-------CEEEEECSCHHHHHHHHHHHC
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCC-------CEEEeecccHHHHHHHHHhcC
Confidence 345688876 5999999999999998 799999999999988877664
|
| >d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Myxococcus xanthus [TaxId: 34]
Probab=86.64 E-value=0.25 Score=42.61 Aligned_cols=32 Identities=19% Similarity=0.270 Sum_probs=29.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN 50 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs 50 (420)
|||+|+|| |..|-..|.+|++++ ++|.+..++
T Consensus 1 m~V~IIGa-G~aGL~aA~~L~~~G-------~~V~vlE~~ 32 (347)
T d2ivda1 1 MNVAVVGG-GISGLAVAHHLRSRG-------TDAVLLESS 32 (347)
T ss_dssp CCEEEECC-BHHHHHHHHHHHTTT-------CCEEEECSS
T ss_pred CeEEEECC-CHHHHHHHHHHHhCC-------CCEEEEecC
Confidence 68999998 999999999999988 789999875
|
| >d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=86.53 E-value=0.35 Score=40.73 Aligned_cols=34 Identities=24% Similarity=0.232 Sum_probs=30.4
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN 50 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs 50 (420)
.+|||+|+|| |..|...+.++++.+ .+|+++.++
T Consensus 2 ~~yDvvVIGg-GpaGl~aA~~aa~~G-------~kV~vie~~ 35 (221)
T d1dxla1 2 DENDVVIIGG-GPGGYVAAIKAAQLG-------FKTTCIEKR 35 (221)
T ss_dssp CCCCEEEECC-SHHHHHHHHHHHHHT-------CCEEEEECS
T ss_pred CcCCEEEECC-CHHHHHHHHHHHHCC-------CcEEEEEec
Confidence 4699999998 999999999999998 789998764
|
| >d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: L-aminoacid oxidase species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
Probab=86.46 E-value=0.41 Score=42.09 Aligned_cols=37 Identities=16% Similarity=0.161 Sum_probs=31.9
Q ss_pred CCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh
Q 014694 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP 51 (420)
Q Consensus 7 ~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~ 51 (420)
.+++.+|+|+|| |..|-..|.+|++.| ++|.|..++.
T Consensus 27 ~~~pkkV~IIGa-G~aGLsaA~~L~~~G-------~~V~vlE~~~ 63 (370)
T d2iida1 27 TSNPKHVVIVGA-GMAGLSAAYVLAGAG-------HQVTVLEASE 63 (370)
T ss_dssp CSSCCEEEEECC-BHHHHHHHHHHHHHT-------CEEEEECSSS
T ss_pred CCCCCeEEEECC-CHHHHHHHHHHHHCC-------CCEEEEeCCC
Confidence 456679999997 999999999999998 8999998753
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=86.44 E-value=0.41 Score=40.59 Aligned_cols=63 Identities=13% Similarity=-0.006 Sum_probs=44.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
.+|.|+|. |-||+.+++.+..-+ .+|...++...... ....+ +...++++++++++|
T Consensus 50 ktvgIiG~-G~IG~~va~~l~~fg-------~~v~~~d~~~~~~~--~~~~~-------------~~~~~~l~~ll~~sD 106 (193)
T d1mx3a1 50 ETLGIIGL-GRVGQAVALRAKAFG-------FNVLFYDPYLSDGV--ERALG-------------LQRVSTLQDLLFHSD 106 (193)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTTT-------CEEEEECTTSCTTH--HHHHT-------------CEECSSHHHHHHHCS
T ss_pred ceEEEecc-ccccccceeeeeccc-------cceeeccCcccccc--hhhhc-------------cccccchhhccccCC
Confidence 47899975 999999999998776 89998888654321 11111 111246888999999
Q ss_pred eeEecc
Q 014694 91 LLLNCV 96 (420)
Q Consensus 91 vVIn~a 96 (420)
+|+.++
T Consensus 107 ~i~~~~ 112 (193)
T d1mx3a1 107 CVTLHC 112 (193)
T ss_dssp EEEECC
T ss_pred EEEEee
Confidence 887655
|
| >d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Pyranose 2-oxidase species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]
Probab=86.34 E-value=0.33 Score=44.16 Aligned_cols=35 Identities=26% Similarity=0.303 Sum_probs=30.7
Q ss_pred CCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEec
Q 014694 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR 49 (420)
Q Consensus 7 ~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagR 49 (420)
|+.+||+||+|+ |.-|.-+|.+|++.+ ++|.++-+
T Consensus 1 md~~yDviIVGs-G~aG~v~A~~La~~G-------~kVlvLEa 35 (379)
T d2f5va1 1 MDIKYDVVIVGS-GPIGCTYARELVGAG-------YKVAMFDI 35 (379)
T ss_dssp CCSEEEEEEECC-SHHHHHHHHHHHHTT-------CEEEEECS
T ss_pred CCCcccEEEECc-CHHHHHHHHHHhhCC-------CeEEEEec
Confidence 467899999986 999999999999987 89999864
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=86.29 E-value=0.53 Score=39.77 Aligned_cols=65 Identities=15% Similarity=0.105 Sum_probs=44.5
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
..+|.|+|. |.||+.+++.+...+ .++...++............ ....++++++++++
T Consensus 47 g~tvgIiG~-G~IG~~va~~l~~fg-------~~v~~~d~~~~~~~~~~~~~--------------~~~~~~l~~ll~~s 104 (191)
T d1gdha1 47 NKTLGIYGF-GSIGQALAKRAQGFD-------MDIDYFDTHRASSSDEASYQ--------------ATFHDSLDSLLSVS 104 (191)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHTTT-------CEEEEECSSCCCHHHHHHHT--------------CEECSSHHHHHHHC
T ss_pred ccceEEeec-ccchHHHHHHHHhhc-------cccccccccccccchhhccc--------------ccccCCHHHHHhhC
Confidence 356888875 999999999988776 78888887654332222111 11124588999999
Q ss_pred CeeEecc
Q 014694 90 KLLLNCV 96 (420)
Q Consensus 90 dvVIn~a 96 (420)
|+|+.++
T Consensus 105 D~v~l~~ 111 (191)
T d1gdha1 105 QFFSLNA 111 (191)
T ss_dssp SEEEECC
T ss_pred CeEEecC
Confidence 9887655
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=86.22 E-value=0.44 Score=37.06 Aligned_cols=34 Identities=9% Similarity=0.016 Sum_probs=28.8
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN 50 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs 50 (420)
.+-+++|+|| |+||-.+|..|.+.+ .+|.++.|+
T Consensus 19 ~P~~vvIIGg-G~iG~E~A~~l~~lG-------~~Vtii~~~ 52 (122)
T d1h6va2 19 CPGKTLVVGA-SYVALECAGFLAGIG-------LDVTVMVRS 52 (122)
T ss_dssp CCCSEEEECC-SHHHHHHHHHHHHTT-------CCEEEEESS
T ss_pred CCCeEEEECC-CccHHHHHHHHhhcC-------CeEEEEEec
Confidence 3447999997 999999999999988 678887776
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=86.08 E-value=0.56 Score=36.41 Aligned_cols=34 Identities=18% Similarity=0.281 Sum_probs=28.9
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP 51 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~ 51 (420)
..+|+|.|| |++|-.++..|.+.+ .+|.+..|+.
T Consensus 30 ~k~vvViGg-G~iG~E~A~~l~~~g-------~~Vtlie~~~ 63 (123)
T d1nhpa2 30 VNNVVVIGS-GYIGIEAAEAFAKAG-------KKVTVIDILD 63 (123)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTT-------CEEEEEESSS
T ss_pred CCEEEEECC-hHHHHHHHHHhhccc-------eEEEEEEecC
Confidence 347999987 999999999999988 7899887753
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=85.97 E-value=0.93 Score=37.88 Aligned_cols=86 Identities=14% Similarity=0.011 Sum_probs=53.1
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
+..+|.|+| .|.||+.+++.+...+ .+|...++..... ...... + ++++++++.
T Consensus 43 ~~~~vgiiG-~G~IG~~va~~l~~fg-------~~v~~~d~~~~~~-------------~~~~~~--~---~~l~ell~~ 96 (188)
T d1sc6a1 43 RGKKLGIIG-YGHIGTQLGILAESLG-------MYVYFYDIENKLP-------------LGNATQ--V---QHLSDLLNM 96 (188)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTT-------CEEEEECSSCCCC-------------CTTCEE--C---SCHHHHHHH
T ss_pred cceEEEEee-cccchhhhhhhccccc-------ceEeeccccccch-------------hhhhhh--h---hhHHHHHhh
Confidence 345788886 5999999999988776 7898888754321 011111 1 358888999
Q ss_pred cCeeEeccCCCC----CCcHHHHHHHHHcCCcEEecC
Q 014694 89 TKLLLNCVGPYR----LHGDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 89 ~dvVIn~aGp~~----~~~~~vv~Ac~~~g~~yvdis 121 (420)
+|+|+.++.... ..+...++.+ ..++-.|.++
T Consensus 97 sDii~i~~plt~~T~~li~~~~l~~m-k~~a~lIN~a 132 (188)
T d1sc6a1 97 SDVVSLHVPENPSTKNMMGAKEISLM-KPGSLLINAS 132 (188)
T ss_dssp CSEEEECCCSSTTTTTCBCHHHHHHS-CTTEEEEECS
T ss_pred ccceeecccCCcchhhhccHHHHhhC-CCCCEEEEcC
Confidence 998876653221 2245555554 2244444443
|
| >d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monooxygenase PhzS species: Pseudomonas aeruginosa [TaxId: 287]
Probab=85.89 E-value=0.39 Score=41.51 Aligned_cols=35 Identities=20% Similarity=0.209 Sum_probs=29.6
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP 51 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~ 51 (420)
|+||+|+|| |..|..++..|.+.+. .+|.|..|+.
T Consensus 1 ~~~V~IvGa-G~aGl~~A~~L~~~Gi------~~V~V~Er~~ 35 (288)
T d3c96a1 1 PIDILIAGA-GIGGLSCALALHQAGI------GKVTLLESSS 35 (288)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTC------SEEEEEESSS
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCC------CeEEEEeCCC
Confidence 589999998 9999999999999871 2788888764
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=85.71 E-value=0.57 Score=36.12 Aligned_cols=35 Identities=14% Similarity=0.029 Sum_probs=29.8
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP 51 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~ 51 (420)
.+-+++|+|| |++|-.+|..|++.| .+|.+..|+.
T Consensus 21 ~p~~i~IiG~-G~ig~E~A~~l~~~G-------~~Vtiv~~~~ 55 (119)
T d3lada2 21 VPGKLGVIGA-GVIGLELGSVWARLG-------AEVTVLEAMD 55 (119)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHTT-------CEEEEEESSS
T ss_pred CCCeEEEECC-ChHHHHHHHHHHHcC-------CceEEEEeec
Confidence 3457999997 999999999999988 7888888753
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=85.67 E-value=0.63 Score=39.03 Aligned_cols=66 Identities=14% Similarity=0.027 Sum_probs=45.3
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
...+|.|+| .|.||+.++++|...+ .+|...+|....... .+... +....++++++++
T Consensus 43 ~~~~vgiiG-~G~IG~~va~~l~~fg-------~~v~~~d~~~~~~~~-~~~~~-------------~~~~~~l~~~l~~ 100 (188)
T d2naca1 43 EAMHVGTVA-AGRIGLAVLRRLAPFD-------VHLHYTDRHRLPESV-EKELN-------------LTWHATREDMYPV 100 (188)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHGGGT-------CEEEEECSSCCCHHH-HHHHT-------------CEECSSHHHHGGG
T ss_pred cccceeecc-ccccchhhhhhhhccC-------ceEEEEeeccccccc-ccccc-------------ccccCCHHHHHHh
Confidence 345788887 5999999999998877 789999886433211 12111 1123557889999
Q ss_pred cCeeEecc
Q 014694 89 TKLLLNCV 96 (420)
Q Consensus 89 ~dvVIn~a 96 (420)
+|+|+.++
T Consensus 101 sD~v~~~~ 108 (188)
T d2naca1 101 CDVVTLNC 108 (188)
T ss_dssp CSEEEECS
T ss_pred ccchhhcc
Confidence 99987665
|
| >d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=85.60 E-value=0.24 Score=41.39 Aligned_cols=99 Identities=7% Similarity=-0.024 Sum_probs=59.6
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
+..+++|+|.+.-+|+.++..|++++ .+|.+...+..........+ ..............++.+.+...+
T Consensus 28 ~GK~vvVIGrS~iVG~Pla~lL~~~g-------aTVt~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~lk~~~~~ 97 (171)
T d1edza1 28 YGKKCIVINRSEIVGRPLAALLANDG-------ATVYSVDVNNIQKFTRGESL---KLNKHHVEDLGEYSEDLLKKCSLD 97 (171)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTTS-------CEEEEECSSEEEEEESCCCS---SCCCCEEEEEEECCHHHHHHHHHH
T ss_pred CCCEEEEECCccccHHHHHHHHHHCC-------CEEEEeccccccccccccce---eeeeeccccccccchhHHhhcccc
Confidence 34589999999999999999999886 67877765422110000000 000111111112356779999999
Q ss_pred cCeeEeccCCCCC--CcHHHHHHHHHcCCcEEecCC
Q 014694 89 TKLLLNCVGPYRL--HGDPVAAACVHSGCDYLDISG 122 (420)
Q Consensus 89 ~dvVIn~aGp~~~--~~~~vv~Ac~~~g~~yvdisg 122 (420)
+|+||+.+|-... .+ --++.|+-.||+..
T Consensus 98 aDIvIsavG~p~~~i~~-----d~ik~GavvIDvGi 128 (171)
T d1edza1 98 SDVVITGVPSENYKFPT-----EYIKEGAVCINFAC 128 (171)
T ss_dssp CSEEEECCCCTTCCBCT-----TTSCTTEEEEECSS
T ss_pred CCEEEEccCCCccccCh-----hhcccCceEeeccc
Confidence 9999999985432 11 11334666777753
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.30 E-value=0.51 Score=36.70 Aligned_cols=34 Identities=21% Similarity=0.133 Sum_probs=29.7
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP 51 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~ 51 (420)
+.+++|+|| |++|-.++..|.+.+ .+|.++.|+.
T Consensus 22 pk~vvIvGg-G~iG~E~A~~l~~~G-------~~Vtlv~~~~ 55 (125)
T d3grsa2 22 PGRSVIVGA-GYIAVEMAGILSALG-------SKTSLMIRHD 55 (125)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTT-------CEEEEECSSS
T ss_pred CCEEEEEcC-CccHHHHHHHHhcCC-------cEEEEEeecc
Confidence 357999997 999999999999988 7899999863
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=85.13 E-value=0.45 Score=36.82 Aligned_cols=33 Identities=24% Similarity=0.313 Sum_probs=28.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP 51 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~ 51 (420)
.+++|.|| |++|-.+|..|.+.+ .+|.+..|++
T Consensus 33 ~~vvIiGg-G~iG~E~A~~l~~~g-------~~Vtlv~~~~ 65 (122)
T d1xhca2 33 GEAIIIGG-GFIGLELAGNLAEAG-------YHVKLIHRGA 65 (122)
T ss_dssp SEEEEEEC-SHHHHHHHHHHHHTT-------CEEEEECSSS
T ss_pred CcEEEECC-cHHHHHHHHHhhccc-------ceEEEEeccc
Confidence 46899987 999999999999988 7899988864
|
| >d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=84.93 E-value=0.31 Score=43.93 Aligned_cols=32 Identities=31% Similarity=0.517 Sum_probs=28.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN 50 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs 50 (420)
+||+|+|| |..|..+|++|++.+ .+|.|..++
T Consensus 2 ~dv~IIGa-G~sGl~~A~~L~~~g-------~~V~iiEk~ 33 (298)
T d1i8ta1 2 YDYIIVGS-GLFGAVCANELKKLN-------KKVLVIEKR 33 (298)
T ss_dssp EEEEEECC-SHHHHHHHHHHGGGT-------CCEEEECSS
T ss_pred ccEEEECC-cHHHHHHHHHHHhCC-------CcEEEEECC
Confidence 68999997 999999999999887 789998765
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=84.88 E-value=0.64 Score=35.48 Aligned_cols=33 Identities=15% Similarity=0.229 Sum_probs=28.9
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN 50 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs 50 (420)
+.+++|.|| |++|-.+|..|.+.+ .+|.+..|.
T Consensus 21 p~~vvIiGg-G~~G~E~A~~l~~~g-------~~Vtlve~~ 53 (115)
T d1lvla2 21 PQHLVVVGG-GYIGLELGIAYRKLG-------AQVSVVEAR 53 (115)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHHT-------CEEEEECSS
T ss_pred CCeEEEECC-CHHHHHHHHHHhhcc-------cceEEEeee
Confidence 457999987 999999999999998 789998875
|
| >d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Hypothetical protein HI0933 species: Haemophilus influenzae [TaxId: 727]
Probab=84.50 E-value=0.3 Score=42.57 Aligned_cols=39 Identities=26% Similarity=0.365 Sum_probs=33.2
Q ss_pred CCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhH
Q 014694 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR 53 (420)
Q Consensus 7 ~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~k 53 (420)
|++.+||+|+|| |-.|...|-+|++++ .+|.++.++..-
T Consensus 1 M~~~~DViIIGa-G~aGl~aA~~la~~G-------~~V~vlEk~~~~ 39 (253)
T d2gqfa1 1 MSQYSENIIIGA-GAAGLFCAAQLAKLG-------KSVTVFDNGKKI 39 (253)
T ss_dssp CEEECSEEEECC-SHHHHHHHHHHHHTT-------CCEEEECSSSSS
T ss_pred CCCCCcEEEECc-CHHHHHHHHHHHHCC-------CcEEEEecCCCC
Confidence 345689999998 999999999999988 799999997643
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=84.42 E-value=0.76 Score=37.96 Aligned_cols=30 Identities=17% Similarity=0.189 Sum_probs=19.2
Q ss_pred cEEEEeCCCHHHHHHHHhccCeeEeccCCCC
Q 014694 70 PILTADTTDPPSLHRLCSQTKLLLNCVGPYR 100 (420)
Q Consensus 70 ~~i~~D~~d~~sl~~~~~~~dvVIn~aGp~~ 100 (420)
.+..++... ..+.+.++++|+||+++|-..
T Consensus 63 tVt~~h~~t-~~l~~~~~~ADivI~a~G~p~ 92 (166)
T d1b0aa1 63 TTTVTHRFT-KNLRHHVENADLLIVAVGKPG 92 (166)
T ss_dssp EEEEECSSC-SCHHHHHHHCSEEEECSCCTT
T ss_pred ccccccccc-chhHHHHhhhhHhhhhccCcc
Confidence 334444332 235677788999999999544
|
| >d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: UDP-glucose dehydrogenase (UDPGDH) species: Streptococcus pyogenes [TaxId: 1314]
Probab=84.36 E-value=0.52 Score=39.44 Aligned_cols=40 Identities=18% Similarity=0.304 Sum_probs=33.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQ 59 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~ 59 (420)
|+|.|+| .||+|..++..++ .+ ++|...+-++++++.+.+
T Consensus 1 MkI~ViG-lG~vGl~~a~~~a-~g-------~~V~g~Din~~~v~~l~~ 40 (196)
T d1dlja2 1 MKIAVAG-SGYVGLSLGVLLS-LQ-------NEVTIVDILPSKVDKINN 40 (196)
T ss_dssp CEEEEEC-CSHHHHHHHHHHT-TT-------SEEEEECSCHHHHHHHHT
T ss_pred CEEEEEC-CChhHHHHHHHHH-CC-------CcEEEEECCHHHHHHHhh
Confidence 6899997 6999999987664 56 799999999998876654
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=84.31 E-value=0.49 Score=36.78 Aligned_cols=35 Identities=11% Similarity=0.136 Sum_probs=30.4
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP 51 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~ 51 (420)
.+-+++|+|| |++|-.+|..|.+.| .+|.++.|+.
T Consensus 24 ~p~~~viiG~-G~iglE~A~~~~~~G-------~~Vtvi~~~~ 58 (123)
T d1dxla2 24 IPKKLVVIGA-GYIGLEMGSVWGRIG-------SEVTVVEFAS 58 (123)
T ss_dssp CCSEEEESCC-SHHHHHHHHHHHHHT-------CEEEEECSSS
T ss_pred cCCeEEEEcc-chHHHHHHHHHHhcC-------CeEEEEEEcc
Confidence 3457999987 999999999999998 7999998864
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=83.96 E-value=0.6 Score=37.35 Aligned_cols=34 Identities=18% Similarity=0.191 Sum_probs=29.0
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP 51 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~ 51 (420)
+|+|+|| |++|-.++.+|.+.++ ..+|+++.+++
T Consensus 4 rivIvGg-G~~G~e~A~~l~~~~~-----~~~Vtlie~~~ 37 (186)
T d1fcda1 4 KVVVVGG-GTGGATAAKYIKLADP-----SIEVTLIEPNT 37 (186)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHCT-----TSEEEEECSCS
T ss_pred cEEEECc-cHHHHHHHHHHHHcCC-----CCcEEEEECCC
Confidence 7999997 9999999999999873 26888888764
|
| >d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=83.85 E-value=0.45 Score=40.26 Aligned_cols=36 Identities=19% Similarity=0.112 Sum_probs=31.4
Q ss_pred CCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC
Q 014694 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN 50 (420)
Q Consensus 7 ~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs 50 (420)
.+.++||+|+|| |..|...+.++++.+ .+|+++.++
T Consensus 2 ~~~~~DlvVIG~-GpaGl~aA~~aa~~G-------~~V~liE~~ 37 (220)
T d1lvla1 2 QTIQTTLLIIGG-GPGGYVAAIRAGQLG-------IPTVLVEGQ 37 (220)
T ss_dssp CCEECSEEEECC-SHHHHHHHHHHHHHT-------CCEEEECSS
T ss_pred CccccCEEEECC-CHHHHHHHHHHHHCC-------CcEEEEecC
Confidence 346789999996 899999999999998 799998875
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=83.64 E-value=0.47 Score=39.00 Aligned_cols=35 Identities=14% Similarity=0.105 Sum_probs=30.0
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcc-eEEEEecCh
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIK-SLALAGRNP 51 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~-~v~iagRs~ 51 (420)
++.+|+|+|| |.+|-..|.+|++.| + .|.+..|+.
T Consensus 3 ~~~kVaIIGa-GpaGl~aA~~l~~~G-------~~~V~v~E~~~ 38 (196)
T d1gtea4 3 YSAKIALLGA-GPASISCASFLARLG-------YSDITIFEKQE 38 (196)
T ss_dssp GGCCEEEECC-SHHHHHHHHHHHHTT-------CCCEEEEESSS
T ss_pred CCCEEEEECC-hHHHHHHHHHHHHCC-------CCeEEEEEecC
Confidence 4568999997 999999999999998 5 488888864
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=83.14 E-value=0.86 Score=35.78 Aligned_cols=34 Identities=21% Similarity=0.330 Sum_probs=29.5
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN 50 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs 50 (420)
...+|+|+|| |++|-.++..|.+.+ .+|.+..|+
T Consensus 34 ~~k~v~VIGg-G~iG~E~A~~l~~~g-------~~Vtvie~~ 67 (133)
T d1q1ra2 34 ADNRLVVIGG-GYIGLEVAATAIKAN-------MHVTLLDTA 67 (133)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTT-------CEEEEECSS
T ss_pred cCCEEEEECC-chHHHHHHHHHHhhC-------cceeeeeec
Confidence 3458999987 999999999999987 789998875
|
| >d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: N,N-dimethylglycine oxidase species: Arthrobacter globiformis [TaxId: 1665]
Probab=82.93 E-value=0.5 Score=41.90 Aligned_cols=33 Identities=21% Similarity=0.454 Sum_probs=28.2
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP 51 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~ 51 (420)
||+|+|| |.+|..+|.+|++++. .+|+++.|+.
T Consensus 3 dViIIGa-Gi~G~s~A~~La~~G~------~~V~liE~~~ 35 (305)
T d1pj5a2 3 RIVIIGA-GIVGTNLADELVTRGW------NNITVLDQGP 35 (305)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTC------CCEEEECSSC
T ss_pred CEEEECc-CHHHHHHHHHHHHcCC------CcEEEEeCCC
Confidence 7999997 9999999999999872 3699998863
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=82.52 E-value=1.3 Score=36.65 Aligned_cols=36 Identities=14% Similarity=0.249 Sum_probs=21.9
Q ss_pred HHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecC
Q 014694 82 LHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 82 l~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdis 121 (420)
+.+.++++|+||.++|-..... .-.++.|+-.||+.
T Consensus 76 l~~~~~~aDivi~a~G~~~~i~----~~~vk~g~iviDvg 111 (170)
T d1a4ia1 76 LDEEVNKGDILVVATGQPEMVK----GEWIKPGAIVIDCG 111 (170)
T ss_dssp HHHHHTTCSEEEECCCCTTCBC----GGGSCTTCEEEECC
T ss_pred HHHHHhhccchhhccccccccc----cccccCCCeEeccC
Confidence 4566778899998888544322 12344555666663
|
| >d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: p-Hydroxybenzoate hydroxylase, PHBH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=82.46 E-value=0.57 Score=41.14 Aligned_cols=35 Identities=23% Similarity=0.160 Sum_probs=31.1
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT 52 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~ 52 (420)
+.+|+|.|| |-+|..++..|.+.| ++|.|+.|+.+
T Consensus 2 k~~V~IvGa-Gp~Gl~~A~~L~~~G-------~~v~vlE~~~~ 36 (292)
T d1k0ia1 2 KTQVAIIGA-GPSGLLLGQLLHKAG-------IDNVILERQTP 36 (292)
T ss_dssp BCSEEEECC-SHHHHHHHHHHHHHT-------CCEEEECSSCH
T ss_pred CCCEEEECc-CHHHHHHHHHHHHCC-------CCEEEEeCCCC
Confidence 458999998 899999999999998 89999998764
|
| >d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella frigidimarina [TaxId: 56812]
Probab=82.37 E-value=0.52 Score=41.94 Aligned_cols=36 Identities=22% Similarity=0.318 Sum_probs=31.4
Q ss_pred CCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh
Q 014694 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP 51 (420)
Q Consensus 8 ~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~ 51 (420)
...+||+|+|+ |..|...+.+|++++ .+|+++.+..
T Consensus 14 ~e~~DVlVIG~-G~aGl~aA~~la~~G-------~~V~lvEK~~ 49 (308)
T d1y0pa2 14 HDTVDVVVVGS-GGAGFSAAISATDSG-------AKVILIEKEP 49 (308)
T ss_dssp SEECSEEEECC-SHHHHHHHHHHHHTT-------CCEEEECSSS
T ss_pred CCcCCEEEECc-CHHHHHHHHHHHHCC-------CcEEEEecCC
Confidence 35689999997 999999999999998 7899998753
|
| >d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Methanothermus fervidus [TaxId: 2180]
Probab=81.80 E-value=1 Score=37.19 Aligned_cols=98 Identities=13% Similarity=0.115 Sum_probs=59.5
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceE-EEEecChhHHHHHHHHhCCCCCCCccEEEEe-----------CCCH
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNPTRVKQALQWASPSHSLSIPILTAD-----------TTDP 79 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v-~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D-----------~~d~ 79 (420)
+|-|-| .|-||+.+++.+..+.+ .++ ++-++++......+.... ......+ +.-.
T Consensus 3 ~VgING-fGRIGR~v~R~l~~~~d------i~vvaInd~~~~~~~~~l~~~~------~~~~~~~~~~~~~~~~~~~~v~ 69 (171)
T d1cf2o1 3 AVAING-YGTVGKRVADAIAQQDD------MKVIGVSKTRPDFEARMALKKG------YDLYVAIPERVKLFEKAGIEVA 69 (171)
T ss_dssp EEEEEC-CSHHHHHHHHHHHTSSS------EEEEEEEESSCSHHHHHHHHTT------CCEEESSGGGHHHHHHTTCCCC
T ss_pred EEEEEc-CcHHHHHHHHHHHhCCC------ceEEEEecCCcHHHHHHHHhcC------CceEecccccceeecccCcccC
Confidence 577776 79999999998877652 555 445555433222222221 1111110 1111
Q ss_pred HHHHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcH
Q 014694 80 PSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEP 124 (420)
Q Consensus 80 ~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~ 124 (420)
..+..+.+++|+||-|.|.|.. ..-.+.-.++|++.|-.+++.
T Consensus 70 g~~~~~~~~vDvViEcTG~f~~--~~~~~~hl~~G~K~vi~~~~~ 112 (171)
T d1cf2o1 70 GTVDDMLDEADIVIDCTPEGIG--AKNLKMYKEKGIKAIFQGGEK 112 (171)
T ss_dssp EEHHHHHHTCSEEEECCSTTHH--HHHHHHHHHTTCEEEECTTSC
T ss_pred CChhHhhcCCCEEEEccCCCCC--HHHHHHHHHcCCCEEEECCCC
Confidence 2455667899999999998753 344566678899988877664
|
| >d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=81.80 E-value=0.97 Score=35.19 Aligned_cols=34 Identities=18% Similarity=0.112 Sum_probs=29.5
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP 51 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~ 51 (420)
+-+++|+|| |++|-.++..+.+.+ .+|.++.|..
T Consensus 26 p~~vvIiGg-G~IG~E~A~~~~~~G-------~~Vtive~~~ 59 (125)
T d1ojta2 26 PGKLLIIGG-GIIGLEMGTVYSTLG-------SRLDVVEMMD 59 (125)
T ss_dssp CSEEEEESC-SHHHHHHHHHHHHHT-------CEEEEECSSS
T ss_pred CCeEEEECC-CHHHHHHHHHhhcCC-------CEEEEEEeec
Confidence 457999987 999999999999998 7899988753
|
| >d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Ornithine cyclodeaminase-like domain: Archaeal alanine dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=81.65 E-value=2.5 Score=38.22 Aligned_cols=93 Identities=14% Similarity=0.207 Sum_probs=61.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
..+.|+| +|..++.-++.|....+ .-+|.+.+|+.++.+++.+++.. ..+... .+ . .+.+.++|
T Consensus 126 ~~l~iiG-aG~QA~~~~~al~~~~~-----i~~i~v~~r~~e~~~~~~~~~~~---~~~~~~-~~--~----~~a~~~aD 189 (320)
T d1omoa_ 126 SVFGFIG-CGTQAYFQLEALRRVFD-----IGEVKAYDVREKAAKKFVSYCED---RGISAS-VQ--P----AEEASRCD 189 (320)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHSC-----CCEEEEECSSHHHHHHHHHHHHH---TTCCEE-EC--C----HHHHTSSS
T ss_pred cEEEEec-CcccHHHHHHHHHHHhh-----hhhcccccCCHHHHHHHHHHHHh---cCCccc-cc--h----hhhhcccc
Confidence 3678886 59999999999888653 25899999999999888887741 122221 11 2 34568899
Q ss_pred eeEeccCCCCCCcHHHHH-HHHHcCCcEEecCCc
Q 014694 91 LLLNCVGPYRLHGDPVAA-ACVHSGCDYLDISGE 123 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~-Ac~~~g~~yvdisge 123 (420)
+|+.|..- .+++++ ...+.|+|..-+...
T Consensus 190 iV~taT~s----~~P~~~~~~l~~G~hv~~iGs~ 219 (320)
T d1omoa_ 190 VLVTTTPS----RKPVVKAEWVEEGTHINAIGAD 219 (320)
T ss_dssp EEEECCCC----SSCCBCGGGCCTTCEEEECSCC
T ss_pred EEEEeccC----cccccchhhcCCCCeEeecCCc
Confidence 99877642 123332 245667777766543
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=81.62 E-value=0.53 Score=39.97 Aligned_cols=60 Identities=18% Similarity=0.176 Sum_probs=41.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
.+|.|+|. |-||+.+++.|..-+ .+|...++...+. ....+ + ..+++++++.+|
T Consensus 46 ktvgIiG~-G~IG~~va~~l~~fg-------~~v~~~d~~~~~~----------~~~~~-----~---~~~l~~l~~~~D 99 (199)
T d1dxya1 46 QTVGVMGT-GHIGQVAIKLFKGFG-------AKVIAYDPYPMKG----------DHPDF-----D---YVSLEDLFKQSD 99 (199)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTT-------CEEEEECSSCCSS----------CCTTC-----E---ECCHHHHHHHCS
T ss_pred eeeeeeec-ccccccccccccccc-------eeeeccCCccchh----------hhcch-----h---HHHHHHHHHhcc
Confidence 46888875 999999999998877 8999888764321 00111 1 124677788888
Q ss_pred eeEecc
Q 014694 91 LLLNCV 96 (420)
Q Consensus 91 vVIn~a 96 (420)
+|+.++
T Consensus 100 ~v~~~~ 105 (199)
T d1dxya1 100 VIDLHV 105 (199)
T ss_dssp EEEECC
T ss_pred cceeee
Confidence 776544
|
| >d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Lysine-specific histone demethylase 1, LSD1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=81.30 E-value=0.87 Score=39.47 Aligned_cols=33 Identities=24% Similarity=0.317 Sum_probs=28.1
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEec
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR 49 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagR 49 (420)
++.+|+|+|| |..|-..|.+|++.| ++|.|.-+
T Consensus 4 ~~~kViVIGa-G~aGL~aA~~L~~~G-------~~V~VlEa 36 (449)
T d2dw4a2 4 KTGKVIIIGS-GVSGLAAARQLQSFG-------MDVTLLEA 36 (449)
T ss_dssp CCCEEEEECC-BHHHHHHHHHHHHTT-------CEEEEECS
T ss_pred CCCcEEEECC-CHHHHHHHHHHHhCC-------CCEEEEeC
Confidence 4457999997 999999999999988 78888754
|
| >d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, middle domain species: Escherichia coli [TaxId: 562]
Probab=81.26 E-value=0.99 Score=37.58 Aligned_cols=37 Identities=16% Similarity=0.134 Sum_probs=32.4
Q ss_pred CCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh
Q 014694 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP 51 (420)
Q Consensus 7 ~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~ 51 (420)
...+.+|+|+|| |..|-..+.+|++++ ++|.+..++.
T Consensus 40 ~~~~k~V~IIGa-GPAGL~AA~~la~~G-------~~Vtl~E~~~ 76 (179)
T d1ps9a3 40 AVQKKNLAVVGA-GPAGLAFAINAAARG-------HQVTLFDAHS 76 (179)
T ss_dssp CSSCCEEEEECC-SHHHHHHHHHHHTTT-------CEEEEEESSS
T ss_pred CCCCcEEEEECc-cHHHHHHHHHHHhhc-------cceEEEeccC
Confidence 445678999997 999999999999998 8999999864
|
| >d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains species: Escherichia coli [TaxId: 562]
Probab=80.86 E-value=0.68 Score=37.62 Aligned_cols=32 Identities=25% Similarity=0.364 Sum_probs=28.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN 50 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs 50 (420)
|||+|+|| |.+|-..+.++++.+ +++.++.+.
T Consensus 2 yDViIIGg-GpaGl~AAi~aar~G-------~~v~iie~~ 33 (184)
T d1fl2a1 2 YDVLIVGS-GPAGAAAAIYSARKG-------IRTGLMGER 33 (184)
T ss_dssp EEEEEECC-SHHHHHHHHHHHTTT-------CCEEEECSS
T ss_pred CcEEEECc-CHHHHHHHHHHHHcC-------CeEEEEEEe
Confidence 89999997 999999999999887 788888764
|
| >d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, middle domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=80.17 E-value=1.2 Score=38.11 Aligned_cols=37 Identities=22% Similarity=0.231 Sum_probs=31.5
Q ss_pred CCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh
Q 014694 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP 51 (420)
Q Consensus 7 ~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~ 51 (420)
...+.+|+|+|| |..|-..|.+|++.+ +++.+..++.
T Consensus 46 ~~~~k~VvIIGa-GpAGl~aA~~l~~~G-------~~v~l~E~~~ 82 (233)
T d1djqa3 46 TKNKDSVLIVGA-GPSGSEAARVLMESG-------YTVHLTDTAE 82 (233)
T ss_dssp CSSCCEEEEECC-SHHHHHHHHHHHHTT-------CEEEEECSSS
T ss_pred ccCCceEEEEcc-cHHHHHHHHHHHHhc-------cceeeEeecc
Confidence 345568999997 999999999999988 8999998754
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