Citrus Sinensis ID: 014742

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------42

MSETYTVKVEEARPAADGKPSGGPVYRCIYAKDGLLESPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRGDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGMVE

ccccEEEEccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccccCEEEEcccccccccEEEEHHHHHHHHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHHHccccEEEccccccHHHHHHHHHHccccEEEEccccHHHHHHHccccccccEEEEEEcccccHHHHHHHHcccEEEEHHHHHHcccccccccccccccEEEEEEcccccccccHHHccHHHHHHHHHHHHHHHHHcccccccccEEEEEcHHHHHHHHHHHHHHHHcccEEEEccccHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHcccEEEEEEccccccHHHHHHHHHHHcccEEECccccc

***TYTV****************PVYRCIYAKDGLLESPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRGDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGMVE

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Long chain acyl-CoA synthetase 2	Activation of long-chain fatty acids for both synthesis of cellular lipids, and degradation via beta-oxidation. Acts in the cutin pathway. Preferentially uses palmitate, palmitoleate, oleate and linoleate. Required for repression of lateral root formation through its role in cutin biosynthesis and subsequent aerial tissues permeability.	probable	Q9XIA9

Prediction of Enzyme Commission Number

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3TSY, chain A
Confidence level:very confident
Coverage over the Query: 23-329,367-419
View the alignment between query and template
View the model in PyMOL

Template: 3IEP, chain A
Confidence level:probable
Coverage over the Query: 76-183,200-359
View the alignment between query and template
View the model in PyMOL