Citrus Sinensis ID: 014746

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------42
MPSNNLLLEEPIRMASILEPSKPTFFPAMTKIVGTLGPRSRSVEIISGCLNAGMSVARFDFSWGDTAYHQETLENLKIAIKSTKKLCAVMLDTIGPELLVVTKTEHPISLLADESVVLTPDQDKEATSNLLPINFSGLSKAVKKGDTIFIGQYLFTGNETTSVMLEVTDVDGEDVVCQIKNSAILARQLYTLHVSQIRIDLPTLTDKDKEVISTWGARNNIDFLSLSHTRGAEDVRHARDFLSQLGDLGQTQIFAKIENTEGLTHFDEILHEADGIILARGNLGVDLPPEKVFLFQKAALYKCNMAGKPAVVTRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAKTTNATSESALKVALDYGKAHGVIKSHDRVVICQKVGDSAVVKIMELED
ccccccccccccccccccccccccccccccEEEEEcccccccHHHHHHHHHHcccEEEEccccccHHHHHHHHHHHHHHHHHccccEEEEEcccccEEEEEEcccccEEEEcccEEEEcccccccccccEEEEcccccccccccccEEEEcccccccccccEEEEEEEEEEccEEEEEEEEccEEccccccccccccccccccccHHcHHHHHHHcccccccEEEEEccccHHHHHHHHHHHHHccccccccEEEEcccHHHHHcHHHHHHHccEEEEEccccccccccccccHHHHHHHHHHHHccccEEEcccHHHHHccccccccHHHHHHHHHHccccHHcccccccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHcccccccccHHHHHHHHHHHHcccEEEEEEEccc
ccccccHHHHHHccccccccccccccccccEEEEEccHHHccHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHHHcHccccEEEEEcccccccccccccccEEEEcccEEEEEEcccccccccEEEEEccccccccccccEEEEcccEEEEEEEEEEEEEEEEccccEEEEEEEEccEEccccccccccccEEccccccHHcHHHHHHHcccccccEEEEHHHccHHHHHHHHHHHHHccccccEEEEEEEccHHHHHcHHHHHHHccEEEEEHHHHHHHccHHHHHHHHHHHHHHHHHHcccEEHcccccHHHccccccHHHHHHHHHHHHHcccEEEEcHHHHccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHcccccHHHHHHHHHHHHHHHccccEEEEEccccc
mpsnnllleepirmasilepskptffpamtkivgtlgprsrsVEIISGCLNagmsvarfdfswgdtayHQETLENLKIAIKSTKKLCAVMLDTIGPELLVVTktehpislladesvvltpdqdkeatsnllpinfsglskavkkgdtIFIGQYLFTGNETTSVMLEvtdvdgedVVCQIKNSAILARQLYTLHVSQiridlptltdkdkevistwgarnnidflslshtrgaedVRHARDFLSQLGDLGQTQIFAKIenteglthfdEILHEADGIILArgnlgvdlppekVFLFQKAALYKcnmagkpaVVTRVVDSmtdnlrptraEATDVANAVLDGSDAILLGAEtlrglypveTISIVGKICAEakttnatsESALKVALDYgkahgvikshDRVVICQKVGDSAVVKIMELED
mpsnnlllEEPIRMASILEPSKPTFFPAMTKIVGTLGPRSRSVEIISGCLNAGMSVARFDFSWGDTAYHQETLENLKIAIKSTKKLCAVMLDTIGPELLVVTKTEHPISLLADESVVLTPDQDKEatsnllpinfsGLSKAVKKGDTIFIGQYLFTGNETTSVMLEVTDVDGEDVVCQIKNSAILARQLYTLHVSQiridlptltdkdkevistwgarnnidflsLSHTRGAEDVRHARDFLSQLGDLGQTQIFAKIENTEGLTHFDEILHEADGIILARGNLGVDLPPEKVFLFQKAALYKCNMAGKPAVVTRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAKTTNATSESALKVALDYGKAHgvikshdrvvICQKVGDSAVVKIMELED
MPSNNLLLEEPIRMASILEPSKPTFFPAMTKIVGTLGPRSRSVEIISGCLNAGMSVARFDFSWGDTAYHQETLENLKIAIKSTKKLCAVMLDTIGPELLVVTKTEHPISLLADESVVLTPDQDKEATSNLLPINFSGLSKAVKKGDTIFIGQYLFTGNETTSVMLEVTDVDGEDVVCQIKNSAILARQLYTLHVSQIRIDLPTLTDKDKEVISTWGARNNIDFLSLSHTRGAEDVRHARDFLSQLGDLGQTQIFAKIENTEGLTHFDEILHEADGIILARGNLGVDLPPEKVFLFQKAALYKCNMAGKPAVVTRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAKTTNATSESALKVALDYGKAHGVIKSHDRVVICQKVGDSAVVKIMELED
**********************PTFFPAMTKIVGTLGPRSRSVEIISGCLNAGMSVARFDFSWGDTAYHQETLENLKIAIKSTKKLCAVMLDTIGPELLVVTKTEHPISLLADESVVLT********SNLLPINFSGLSKAVKKGDTIFIGQYLFTGNETTSVMLEVTDVDGEDVVCQIKNSAILARQLYTLHVSQIRIDLPTLTDKDKEVISTWGARNNIDFLSLSHTRGAEDVRHARDFLSQLGDLGQTQIFAKIENTEGLTHFDEILHEADGIILARGNLGVDLPPEKVFLFQKAALYKCNMAGKPAVVTRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAKTTNATSESALKVALDYGKAHGVIKSHDRVVICQKVGDSAVVKI*****
***********IRMASILEPSK*TFFPAMTKIVGTLGPRSRSVEIISGCLNAGMSVARFDFSWGDTAYHQETLENLKIAIKSTKKLCAVMLDTIGPELLVVTKTEHPISLLADESVVLTPDQDKEATSNLLPINFSGLSKAVKKGDTIFIGQYLFTGNETTSVMLEVTDVDGEDVVCQIKNSAILARQLYTLHVSQIRIDLPTLTDKDKEVISTWGARNNIDFLSLSHTRGAEDVRHARDFLSQLGDLGQTQIFAKIENTEGLTHFDEILHEADGIILARGNLGVDLPPEKVFLFQKAALYKCNMAGKPAVVTRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAKTTNATSESALKV*********VIKSHDRVVICQKVGDSAVVKIMEL**
MPSNNLLLEEPIRMASILEPSKPTFFPAMTKIVGTLGPRSRSVEIISGCLNAGMSVARFDFSWGDTAYHQETLENLKIAIKSTKKLCAVMLDTIGPELLVVTKTEHPISLLADESVVLTPDQDKEATSNLLPINFSGLSKAVKKGDTIFIGQYLFTGNETTSVMLEVTDVDGEDVVCQIKNSAILARQLYTLHVSQIRIDLPTLTDKDKEVISTWGARNNIDFLSLSHTRGAEDVRHARDFLSQLGDLGQTQIFAKIENTEGLTHFDEILHEADGIILARGNLGVDLPPEKVFLFQKAALYKCNMAGKPAVVTRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAKTTNATSESALKVALDYGKAHGVIKSHDRVVICQKVGDSAVVKIMELED
*****LLLEEPIRMASILEPSKPTFFPAMTKIVGTLGPRSRSVEIISGCLNAGMSVARFDFSWGDTAYHQETLENLKIAIKSTKKLCAVMLDTIGPELLVVTKTEHPISLLADESVVLTPDQDKEATSNLLPINFSGLSKAVKKGDTIFIGQYLFTGNETTSVMLEVTDVDGEDVVCQIKNSAILARQLYTLHVSQIRIDLPTLTDKDKEVISTWGARNNIDFLSLSHTRGAEDVRHARDFLSQLGDLGQTQIFAKIENTEGLTHFDEILHEADGIILARGNLGVDLPPEKVFLFQKAALYKCNMAGKPAVVTRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAKTTNATSESALKVALDYGKAHGVIKSHDRVVICQKVGDSAVVKIME***
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oooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MPSNNLLLEEPIRMASILEPSKPTFFPAMTKIVGTLGPRSRSVEIISGCLNAGMSVARFDFSWGDTAYHQETLENLKIAIKSTKKLCAVMLDTIGPELLVVTKTEHPISLLADESVVLTPDQDKEATSNLLPINFSGLSKAVKKGDTIFIGQYLFTGNETTSVMLEVTDVDGEDVVCQIKNSAILARQLYTLHVSQIRIDLPTLTDKDKEVISTWGARNNIDFLSLSHTRGAEDVRHARDFLSQLGDLGQTQIFAKIENTEGLTHFDEILHEADGIILARGNLGVDLPPEKVFLFQKAALYKCNMAGKPAVVTRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAKTTNATSESALKVALDYGKAHGVIKSHDRVVICQKVGDSAVVKIMELED
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query419 2.2.26 [Sep-21-2011]
Q42806 511 Pyruvate kinase, cytosoli no no 0.809 0.663 0.440 4e-75
P22200 510 Pyruvate kinase, cytosoli N/A no 0.799 0.656 0.433 6e-73
O65595 497 Probable pyruvate kinase, no no 0.835 0.704 0.414 1e-71
Q42954 508 Pyruvate kinase, cytosoli N/A no 0.794 0.655 0.428 1e-71
O44006531 Pyruvate kinase OS=Eimeri N/A no 0.832 0.657 0.395 1e-66
Q54RF5 507 Pyruvate kinase OS=Dictyo yes no 0.899 0.743 0.365 5e-64
P77983470 Pyruvate kinase I OS=Salm yes no 0.778 0.693 0.387 2e-62
Q8Z6K2470 Pyruvate kinase I OS=Salm N/A no 0.778 0.693 0.387 2e-62
P0AD61470 Pyruvate kinase I OS=Esch N/A no 0.778 0.693 0.384 2e-61
P0AD62470 Pyruvate kinase I OS=Esch N/A no 0.778 0.693 0.384 2e-61
>sp|Q42806|KPYC_SOYBN Pyruvate kinase, cytosolic isozyme OS=Glycine max PE=2 SV=1 Back     alignment and function desciption
 Score =  282 bits (721), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 159/361 (44%), Positives = 220/361 (60%), Gaps = 22/361 (6%)

Query: 30  TKIVGTLGPRSRSVEIISGCLNAGMSVARFDFSWGDTAYHQETLENLKIAIKSTKKLCAV 89
           TKIV TLGP SRSVE+    L AGM+VARF+FS G   YHQETL NLK A+ +T  LCAV
Sbjct: 23  TKIVCTLGPASRSVEMTEKLLRAGMNVARFNFSHGTHDYHQETLNNLKTAMHNTGILCAV 82

Query: 90  MLDTIGPELLV-VTKTEHPISLLADESVVLTPDQDKEATSNLLPINFSGLSKAVKKGDTI 148
           MLDT GPE+     K   PI L   + V +T D D +    ++ +++  L   +K G+TI
Sbjct: 83  MLDTKGPEIRTGFLKDGKPIQLKEGQEVTITTDYDIKGDPEMISMSYKKLPVHLKPGNTI 142

Query: 149 FIGQYLFTGNETTSVMLEVTDVDGEDVVCQIKNSAILARQLYTLHVSQIRIDLPTLTDKD 208
                   G  T +V+    D D   V C+ +N+A L  +   +++  + +DLPTLT+KD
Sbjct: 143 LCSD----GTITLTVL--SCDPDAGTVRCRCENTATLGER-KNVNLPGVVVDLPTLTEKD 195

Query: 209 KEVISTWGARNNIDFLSLSHTRGAEDVRHARDFLSQLGDLGQTQIFAKIENTEGLTHFDE 268
           KE I  WG  N ID ++LS  R   D+ + R  L         Q+ +K+EN EG+ +FDE
Sbjct: 196 KEDILGWGVPNKIDMIALSFVRKGSDLVNVRKVLGPHAK--NIQLMSKVENQEGVLNFDE 253

Query: 269 ILHEADGIILARGNLGVDLPPEKVFLFQKAALYKCNMAGKPAV-VTRVVDSMTDNLRPTR 327
           IL E D  ++ARG+LG+++P EK+FL QK  +YKCN+ GKP V  T++++SM  + RPTR
Sbjct: 254 ILRETDAFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTR 313

Query: 328 AEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAKTTNATSESALKVALDY 387
           AEATDVANAVLDG+D ++L  E+  G YP   + I+ +IC EA+++           LDY
Sbjct: 314 AEATDVANAVLDGTDCVMLSGESAAGAYPELAVKIMARICIEAESS-----------LDY 362

Query: 388 G 388
           G
Sbjct: 363 G 363

Glycine max (taxid: 3847)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 4EC: 0
>sp|P22200|KPYC_SOLTU Pyruvate kinase, cytosolic isozyme OS=Solanum tuberosum PE=2 SV=1 Back     alignment and function description
>sp|O65595|KPYC_ARATH Probable pyruvate kinase, cytosolic isozyme OS=Arabidopsis thaliana GN=At4g26390 PE=3 SV=1 Back     alignment and function description
>sp|Q42954|KPYC_TOBAC Pyruvate kinase, cytosolic isozyme OS=Nicotiana tabacum PE=2 SV=1 Back     alignment and function description
>sp|O44006|KPYK_EIMTE Pyruvate kinase OS=Eimeria tenella GN=PYK PE=2 SV=1 Back     alignment and function description
>sp|Q54RF5|KPYK_DICDI Pyruvate kinase OS=Dictyostelium discoideum GN=pyk PE=1 SV=1 Back     alignment and function description
>sp|P77983|KPYK1_SALTY Pyruvate kinase I OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=pykF PE=3 SV=2 Back     alignment and function description
>sp|Q8Z6K2|KPYK1_SALTI Pyruvate kinase I OS=Salmonella typhi GN=pykF PE=3 SV=1 Back     alignment and function description
>sp|P0AD61|KPYK1_ECOLI Pyruvate kinase I OS=Escherichia coli (strain K12) GN=pykF PE=1 SV=1 Back     alignment and function description
>sp|P0AD62|KPYK1_ECO57 Pyruvate kinase I OS=Escherichia coli O157:H7 GN=pykF PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query419
225449659 527 PREDICTED: pyruvate kinase, cytosolic is 0.837 0.666 0.854 0.0
225441044 527 PREDICTED: pyruvate kinase, cytosolic is 0.873 0.694 0.843 0.0
224069760 527 predicted protein [Populus trichocarpa] 0.873 0.694 0.832 0.0
296090381514 unnamed protein product [Vitis vinifera] 0.806 0.657 0.857 0.0
147839415368 hypothetical protein VITISV_026975 [Viti 0.873 0.994 0.838 0.0
224097696 526 predicted protein [Populus trichocarpa] 0.863 0.688 0.833 1e-180
449451092 527 PREDICTED: pyruvate kinase, cytosolic is 0.873 0.694 0.824 1e-180
356576333 526 PREDICTED: pyruvate kinase, cytosolic is 0.918 0.731 0.793 1e-180
346703411 527 hypothetical_protein [Oryza glaberrima] 0.880 0.700 0.823 1e-179
115484175 527 Os11g0148500 [Oryza sativa Japonica Grou 0.873 0.694 0.827 1e-179
>gi|225449659|ref|XP_002263319.1| PREDICTED: pyruvate kinase, cytosolic isozyme-like [Vitis vinifera] Back     alignment and taxonomy information
 Score =  661 bits (1705), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 317/371 (85%), Positives = 342/371 (92%)

Query: 1   MPSNNLLLEEPIRMASILEPSKPTFFPAMTKIVGTLGPRSRSVEIISGCLNAGMSVARFD 60
           M S +LLLEEPIRMASILEPSK +FFPAMTKIVGTLGPRSRSV +ISGC+ AGM VARFD
Sbjct: 1   MQSTHLLLEEPIRMASILEPSKRSFFPAMTKIVGTLGPRSRSVGVISGCITAGMCVARFD 60

Query: 61  FSWGDTAYHQETLENLKIAIKSTKKLCAVMLDTIGPELLVVTKTEHPISLLADESVVLTP 120
           FSWGD  +HQET+ENLK+A+KSTKKLCAVMLDT+GPEL V+ ++EHPISL  D  VVLTP
Sbjct: 61  FSWGDAEFHQETVENLKVAVKSTKKLCAVMLDTVGPELQVLNRSEHPISLQVDSLVVLTP 120

Query: 121 DQDKEATSNLLPINFSGLSKAVKKGDTIFIGQYLFTGNETTSVMLEVTDVDGEDVVCQIK 180
           +QDKEATSNLLP+NF GLSKAVKKGDTIFIGQYLFTG+ETTSV LEVT+VDGEDVVC IK
Sbjct: 121 NQDKEATSNLLPLNFGGLSKAVKKGDTIFIGQYLFTGSETTSVWLEVTEVDGEDVVCLIK 180

Query: 181 NSAILARQLYTLHVSQIRIDLPTLTDKDKEVISTWGARNNIDFLSLSHTRGAEDVRHARD 240
           NSA LA  LYTLHVSQIRIDLPTLTDKDKEVISTWG +N IDFLSLS+TR AEDVRHAR+
Sbjct: 181 NSATLAGSLYTLHVSQIRIDLPTLTDKDKEVISTWGVQNKIDFLSLSYTRHAEDVRHARE 240

Query: 241 FLSQLGDLGQTQIFAKIENTEGLTHFDEILHEADGIILARGNLGVDLPPEKVFLFQKAAL 300
           FLS+LGDL QTQIFAKIEN EGL HFDEIL EADGIIL+RGNLG+DLPPEKVFLFQKAA+
Sbjct: 241 FLSKLGDLNQTQIFAKIENIEGLNHFDEILQEADGIILSRGNLGIDLPPEKVFLFQKAAV 300

Query: 301 YKCNMAGKPAVVTRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETI 360
           YKCNMAGKPAV+TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETI
Sbjct: 301 YKCNMAGKPAVITRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETI 360

Query: 361 SIVGKICAEAK 371
           S V KICAEA+
Sbjct: 361 STVNKICAEAE 371

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225441044|ref|XP_002283911.1| PREDICTED: pyruvate kinase, cytosolic isozyme-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|224069760|ref|XP_002326407.1| predicted protein [Populus trichocarpa] gi|118480989|gb|ABK92448.1| unknown [Populus trichocarpa] gi|222833600|gb|EEE72077.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|296090381|emb|CBI40200.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|147839415|emb|CAN74454.1| hypothetical protein VITISV_026975 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224097696|ref|XP_002311045.1| predicted protein [Populus trichocarpa] gi|222850865|gb|EEE88412.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449451092|ref|XP_004143296.1| PREDICTED: pyruvate kinase, cytosolic isozyme-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356576333|ref|XP_003556287.1| PREDICTED: pyruvate kinase, cytosolic isozyme-like [Glycine max] Back     alignment and taxonomy information
>gi|346703411|emb|CBX25508.1| hypothetical_protein [Oryza glaberrima] Back     alignment and taxonomy information
>gi|115484175|ref|NP_001065749.1| Os11g0148500 [Oryza sativa Japonica Group] gi|77548686|gb|ABA91483.1| pyruvate kinase family protein, expressed [Oryza sativa Japonica Group] gi|113644453|dbj|BAF27594.1| Os11g0148500 [Oryza sativa Japonica Group] gi|215692631|dbj|BAG88051.1| unnamed protein product [Oryza sativa Japonica Group] gi|218185248|gb|EEC67675.1| hypothetical protein OsI_35105 [Oryza sativa Indica Group] gi|222615524|gb|EEE51656.1| hypothetical protein OsJ_32969 [Oryza sativa Japonica Group] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query419
TAIR|locus:2085226 527 AT3G52990 [Arabidopsis thalian 0.885 0.703 0.795 3.2e-175
TAIR|locus:2044928 527 AT2G36580 [Arabidopsis thalian 0.885 0.703 0.797 1.1e-174
TAIR|locus:2160599 510 AT5G63680 [Arabidopsis thalian 0.799 0.656 0.439 1.8e-74
TAIR|locus:2161068 498 AT5G56350 [Arabidopsis thalian 0.799 0.672 0.433 2.9e-74
TAIR|locus:2095953 510 AT3G04050 [Arabidopsis thalian 0.794 0.652 0.424 3.2e-73
TAIR|locus:2159577 510 AT5G08570 [Arabidopsis thalian 0.799 0.656 0.436 5.3e-73
TAIR|locus:2131453 497 AT4G26390 [Arabidopsis thalian 0.797 0.672 0.429 2.3e-72
TAIR|locus:2092085497 AT3G25960 [Arabidopsis thalian 0.794 0.670 0.430 1.8e-64
DICTYBASE|DDB_G0283247 507 pyk "pyruvate kinase" [Dictyos 0.859 0.710 0.377 1.8e-64
TAIR|locus:2078966 510 AT3G55650 [Arabidopsis thalian 0.794 0.652 0.430 7.6e-64
TAIR|locus:2085226 AT3G52990 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1528 (542.9 bits), Expect = 3.2e-175, Sum P(2) = 3.2e-175
 Identities = 295/371 (79%), Positives = 334/371 (90%)

Query:     1 MPSNNLLLEEPIRMASILEPSKPTFFPAMTKIVGTLGPRSRSVEIISGCLNAGMSVARFD 60
             M S++LLLEEPIRMASILEPSK +FFPA+TKIVGTLGP+SRSVE +SGCL AGMSVARFD
Sbjct:     1 MHSSHLLLEEPIRMASILEPSKSSFFPALTKIVGTLGPKSRSVEALSGCLKAGMSVARFD 60

Query:    61 FSWGDTAYHQETLENLKIAIKSTKKLCAVMLDTIGPELLVVTKTEHPISLLADESVVLTP 120
             FSWGD  YHQETL+NLK+A++STKKLCAVMLDT+GPEL V+ K+E  I+L AD  V LTP
Sbjct:    61 FSWGDADYHQETLDNLKVAVRSTKKLCAVMLDTVGPELQVINKSEKAITLKADGLVTLTP 120

Query:   121 DQDKEATSNLLPINFSGLSKAVKKGDTIFIGQYLFTGNETTSVMLEVTDVDGEDVVCQIK 180
             +QD+EA+S +LPINF+GL+KAVKKGDTIF+GQYLFTG+ETTSV LEV +V G+DV+C  +
Sbjct:   121 NQDQEASSEVLPINFNGLAKAVKKGDTIFVGQYLFTGSETTSVWLEVDEVKGDDVICLSR 180

Query:   181 NSAILARQLYTLHVSQIRIDLPTLTDKDKEVISTWGARNNIDFLSLSHTRGAEDVRHARD 240
             N+A LA  L+TLH SQ+ IDLPTLT+KDKEVISTWG +N IDFLSLS+ R AEDVR  R+
Sbjct:   181 NAATLAGSLFTLHSSQVHIDLPTLTEKDKEVISTWGVQNKIDFLSLSYCRHAEDVRQTRE 240

Query:   241 FLSQLGDLGQTQIFAKIENTEGLTHFDEILHEADGIILARGNLGVDLPPEKVFLFQKAAL 300
              L +LGDL QTQIFAKIEN EGLTHFDEIL EADGIIL+RGNLG+DLPPEKVFLFQKAAL
Sbjct:   241 MLKKLGDLSQTQIFAKIENVEGLTHFDEILQEADGIILSRGNLGIDLPPEKVFLFQKAAL 300

Query:   301 YKCNMAGKPAVVTRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETI 360
             YKCNMAGKPAV+TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETI
Sbjct:   301 YKCNMAGKPAVLTRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETI 360

Query:   361 SIVGKICAEAK 371
             S VG+ICAEA+
Sbjct:   361 STVGRICAEAE 371
GO:0000287 "magnesium ion binding" evidence=IEA
GO:0003824 "catalytic activity" evidence=IEA
GO:0004743 "pyruvate kinase activity" evidence=IEA;ISS
GO:0005737 "cytoplasm" evidence=ISM
GO:0006096 "glycolysis" evidence=IEA;ISS
GO:0030955 "potassium ion binding" evidence=IEA
GO:0046686 "response to cadmium ion" evidence=IEP
GO:0016020 "membrane" evidence=IDA
GO:0005829 "cytosol" evidence=IDA
TAIR|locus:2044928 AT2G36580 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2160599 AT5G63680 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2161068 AT5G56350 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2095953 AT3G04050 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2159577 AT5G08570 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2131453 AT4G26390 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2092085 AT3G25960 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0283247 pyk "pyruvate kinase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
TAIR|locus:2078966 AT3G55650 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer2.7.1.400.824
3rd Layer2.7.10.766

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00010814001
RecName- Full=Pyruvate kinase; EC=2.7.1.40; (375 aa)
(Vitis vinifera)
Predicted Functional Partners:
GPEPC
RecName- Full=Phosphoenolpyruvate carboxylase; EC=4.1.1.31; (965 aa)
     •• 0.925
GSVIVG00009618001
RecName- Full=L-lactate dehydrogenase; EC=1.1.1.27; (350 aa)
     •• 0.917
GSVIVG00038473001
RecName- Full=Enolase; EC=4.2.1.11; (440 aa)
     •• 0.916
NADP-ME
RecName- Full=Malic enzyme; (496 aa)
     •• 0.915
Ndpk
RecName- Full=Nucleoside diphosphate kinase; EC=2.7.4.6; (148 aa)
     •• 0.910
GSVIVG00024180001
RecName- Full=Enolase; EC=4.2.1.11; (435 aa)
     •• 0.909
GSVIVG00026376001
hypothetical protein LOC100248878 (320 aa)
     •• 0.908
GSVIVG00035062001
SubName- Full=Chromosome chr1 scaffold_75, whole genome shotgun sequence; (221 aa)
     •• 0.906
GSVIVG00019884001
SubName- Full=Chromosome chr5 scaffold_2, whole genome shotgun sequence; (295 aa)
     •• 0.905
GSVIVG00022048001
RecName- Full=DNA polymerase; EC=2.7.7.7; (2224 aa)
     •• 0.904

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query419
PLN02765 526 PLN02765, PLN02765, pyruvate kinase 0.0
PLN02461 511 PLN02461, PLN02461, Probable pyruvate kinase 1e-112
cd00288480 cd00288, Pyruvate_Kinase, Pyruvate kinase (PK): La 1e-101
TIGR01064473 TIGR01064, pyruv_kin, pyruvate kinase 1e-99
pfam00224348 pfam00224, PK, Pyruvate kinase, barrel domain 1e-99
PRK05826465 PRK05826, PRK05826, pyruvate kinase; Provisional 2e-95
PTZ00066 513 PTZ00066, PTZ00066, pyruvate kinase; Provisional 1e-94
COG0469477 COG0469, PykF, Pyruvate kinase [Carbohydrate trans 3e-92
PRK09206470 PRK09206, PRK09206, pyruvate kinase; Provisional 9e-84
PRK06354 590 PRK06354, PRK06354, pyruvate kinase; Provisional 4e-71
PRK06247476 PRK06247, PRK06247, pyruvate kinase; Provisional 2e-64
PTZ00300454 PTZ00300, PTZ00300, pyruvate kinase; Provisional 3e-57
PRK06739352 PRK06739, PRK06739, pyruvate kinase; Validated 7e-46
PLN02623581 PLN02623, PLN02623, pyruvate kinase 1e-44
PLN02762509 PLN02762, PLN02762, pyruvate kinase complex alpha 2e-41
PLN02765526 PLN02765, PLN02765, pyruvate kinase 1e-19
PRK14725608 PRK14725, PRK14725, pyruvate kinase; Provisional 1e-14
PRK08187493 PRK08187, PRK08187, pyruvate kinase; Validated 4e-12
PLN02461511 PLN02461, PLN02461, Probable pyruvate kinase 4e-05
>gnl|CDD|215409 PLN02765, PLN02765, pyruvate kinase Back     alignment and domain information 
 Score =  737 bits (1904), Expect = 0.0
 Identities = 305/370 (82%), Positives = 335/370 (90%), Gaps = 1/370 (0%)

Query: 1   MPSNNLLLEEPIRMASILEPSKPTFFPAMTKIVGTLGPRSRSVEIISGCLNAGMSVARFD 60
           M S++LLLEEPIR+ASILEPSKP+FFPA+TKIVGTLGP+SRSVE+I  CL AGMSVARFD
Sbjct: 1   MQSSHLLLEEPIRLASILEPSKPSFFPALTKIVGTLGPKSRSVEVIEACLKAGMSVARFD 60

Query: 61  FSWGDTAYHQETLENLKIAIKSTKKLCAVMLDTIGPELLVVTKTEHPISLLADESVVLTP 120
           FSWGD  YHQETLENLKIA+K+TKKLCAVMLDT+GPEL V+ KTE PISL A  +V LTP
Sbjct: 61  FSWGDAEYHQETLENLKIAVKNTKKLCAVMLDTVGPELQVINKTEKPISLKAGNTVTLTP 120

Query: 121 DQDKEATSNLLPINFSGLSKAVKKGDTIFIGQYLFTGNETTSVMLEVTDVDGEDVVCQIK 180
           DQ KEA+S +LPINF GL+KAVK GDTIF+GQYLFTG+ETTSV LEV +V G+DVVC +K
Sbjct: 121 DQSKEASSEVLPINFPGLAKAVKPGDTIFVGQYLFTGSETTSVWLEVDEVKGDDVVCTVK 180

Query: 181 NSAILARQLYTLHVSQIRIDLPTLTDKDKEVISTWGARNNIDFLSLSHTRGAEDVRHARD 240
           NSA LA  L+TLHVSQ+RIDLPTL++KDKEVISTWG  N IDFLSLS+TR AEDVR AR+
Sbjct: 181 NSATLAGSLFTLHVSQVRIDLPTLSEKDKEVISTWGVPNKIDFLSLSYTRHAEDVREARE 240

Query: 241 FLSQLGDLGQTQIFAKIENTEGLTHFDEILHEADGIILARGNLGVDLPPEKVFLFQKAAL 300
           FLS LG L QTQIFAKIEN EGLTHFDEIL EADGIIL+RGNLG+DLPPEKVFLFQKAAL
Sbjct: 241 FLSSLG-LSQTQIFAKIENVEGLTHFDEILQEADGIILSRGNLGIDLPPEKVFLFQKAAL 299

Query: 301 YKCNMAGKPAVVTRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETI 360
           YKCNMAGKPAVVTRVVDSMTDNLRPTRAEATDVANAVLDG+DAILLGAETLRGLYPVETI
Sbjct: 300 YKCNMAGKPAVVTRVVDSMTDNLRPTRAEATDVANAVLDGADAILLGAETLRGLYPVETI 359

Query: 361 SIVGKICAEA 370
           S VG+ICAEA
Sbjct: 360 STVGRICAEA 369

Length = 526
>gnl|CDD|215255 PLN02461, PLN02461, Probable pyruvate kinase Back     alignment and domain information
>gnl|CDD|238178 cd00288, Pyruvate_Kinase, Pyruvate kinase (PK): Large allosteric enzyme that regulates glycolysis through binding of the substrate, phosphoenolpyruvate, and one or more allosteric effectors Back     alignment and domain information
>gnl|CDD|233257 TIGR01064, pyruv_kin, pyruvate kinase Back     alignment and domain information
>gnl|CDD|215802 pfam00224, PK, Pyruvate kinase, barrel domain Back     alignment and domain information
>gnl|CDD|235619 PRK05826, PRK05826, pyruvate kinase; Provisional Back     alignment and domain information
>gnl|CDD|173361 PTZ00066, PTZ00066, pyruvate kinase; Provisional Back     alignment and domain information
>gnl|CDD|223545 COG0469, PykF, Pyruvate kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|181699 PRK09206, PRK09206, pyruvate kinase; Provisional Back     alignment and domain information
>gnl|CDD|235784 PRK06354, PRK06354, pyruvate kinase; Provisional Back     alignment and domain information
>gnl|CDD|180487 PRK06247, PRK06247, pyruvate kinase; Provisional Back     alignment and domain information
>gnl|CDD|140321 PTZ00300, PTZ00300, pyruvate kinase; Provisional Back     alignment and domain information
>gnl|CDD|180676 PRK06739, PRK06739, pyruvate kinase; Validated Back     alignment and domain information
>gnl|CDD|215334 PLN02623, PLN02623, pyruvate kinase Back     alignment and domain information
>gnl|CDD|215407 PLN02762, PLN02762, pyruvate kinase complex alpha subunit Back     alignment and domain information
>gnl|CDD|215409 PLN02765, PLN02765, pyruvate kinase Back     alignment and domain information
>gnl|CDD|237804 PRK14725, PRK14725, pyruvate kinase; Provisional Back     alignment and domain information
>gnl|CDD|236178 PRK08187, PRK08187, pyruvate kinase; Validated Back     alignment and domain information
>gnl|CDD|215255 PLN02461, PLN02461, Probable pyruvate kinase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 419
PLN02762509 pyruvate kinase complex alpha subunit 100.0
PTZ00066513 pyruvate kinase; Provisional 100.0
PLN02461511 Probable pyruvate kinase 100.0
PLN02765526 pyruvate kinase 100.0
COG0469477 PykF Pyruvate kinase [Carbohydrate transport and m 100.0
PRK09206470 pyruvate kinase; Provisional 100.0
PRK06247476 pyruvate kinase; Provisional 100.0
cd00288480 Pyruvate_Kinase Pyruvate kinase (PK): Large allost 100.0
PRK06354 590 pyruvate kinase; Provisional 100.0
PRK05826465 pyruvate kinase; Provisional 100.0
PRK06739352 pyruvate kinase; Validated 100.0
PF00224348 PK: Pyruvate kinase, barrel domain; InterPro: IPR0 100.0
PLN02623581 pyruvate kinase 100.0
PTZ00300454 pyruvate kinase; Provisional 100.0
TIGR01064473 pyruv_kin pyruvate kinase. This enzyme is a homote 100.0
KOG2323501 consensus Pyruvate kinase [Carbohydrate transport 100.0
PRK14725608 pyruvate kinase; Provisional 100.0
PRK08187493 pyruvate kinase; Validated 100.0
TIGR03239249 GarL 2-dehydro-3-deoxyglucarate aldolase. In E. co 99.69
PRK10558256 alpha-dehydro-beta-deoxy-D-glucarate aldolase; Pro 99.68
PRK10128267 2-keto-3-deoxy-L-rhamnonate aldolase; Provisional 99.64
COG3836255 HpcH 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldola 99.6
TIGR02311249 HpaI 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldola 99.59
PF03328221 HpcH_HpaI: HpcH/HpaI aldolase/citrate lyase family 99.54
TIGR01588288 citE citrate lyase, beta subunit. This is a model 99.37
TIGR01418782 PEP_synth phosphoenolpyruvate synthase. Also calle 99.33
PRK06464795 phosphoenolpyruvate synthase; Validated 99.31
TIGR01417565 PTS_I_fam phosphoenolpyruvate-protein phosphotrans 99.2
PRK11177575 phosphoenolpyruvate-protein phosphotransferase; Pr 99.1
COG2301283 CitE Citrate lyase beta subunit [Carbohydrate tran 98.97
TIGR01344511 malate_syn_A malate synthase A. This model represe 98.79
cd00727511 malate_synt_A Malate synthase A (MSA), present in 98.75
PRK09255531 malate synthase; Validated 98.67
cd00480511 malate_synt Malate synthase catalyzes the Claisen 98.6
PF02896293 PEP-utilizers_C: PEP-utilising enzyme, TIM barrel 98.41
PLN02626 551 malate synthase 97.95
PF02887117 PK_C: Pyruvate kinase, alpha/beta domain; InterPro 97.68
PRK11061748 fused phosphoenolpyruvate-protein phosphotransfera 97.48
TIGR01828856 pyru_phos_dikin pyruvate, phosphate dikinase. This 97.22
TIGR02751 506 PEPCase_arch phosphoenolpyruvate carboxylase, arch 96.98
COG1080574 PtsA Phosphoenolpyruvate-protein kinase (PTS syste 96.9
PRK09279879 pyruvate phosphate dikinase; Provisional 96.88
PRK08649368 inosine 5-monophosphate dehydrogenase; Validated 96.87
COG3605756 PtsP Signal transduction protein containing GAF an 96.17
PRK13655 494 phosphoenolpyruvate carboxylase; Provisional 96.14
TIGR01304369 IMP_DH_rel_2 IMP dehydrogenase family protein. Thi 96.06
PF00478352 IMPDH: IMP dehydrogenase / GMP reductase domain; I 95.85
PRK00009 911 phosphoenolpyruvate carboxylase; Reviewed 95.81
cd00381325 IMPDH IMPDH: The catalytic domain of the inosine m 95.75
TIGR01305343 GMP_reduct_1 guanosine monophosphate reductase, eu 95.27
TIGR01302450 IMP_dehydrog inosine-5'-monophosphate dehydrogenas 94.85
PTZ00398 974 phosphoenolpyruvate carboxylase; Provisional 94.7
PTZ00314495 inosine-5'-monophosphate dehydrogenase; Provisiona 94.36
PLN02274505 inosine-5'-monophosphate dehydrogenase 94.11
TIGR01306321 GMP_reduct_2 guanosine monophosphate reductase, ba 93.8
PRK05096346 guanosine 5'-monophosphate oxidoreductase; Provisi 93.57
PRK08883220 ribulose-phosphate 3-epimerase; Provisional 93.57
COG0574740 PpsA Phosphoenolpyruvate synthase/pyruvate phospha 93.42
TIGR00612346 ispG_gcpE 1-hydroxy-2-methyl-2-(E)-butenyl 4-dipho 93.3
PRK07107502 inosine 5-monophosphate dehydrogenase; Validated 93.13
PRK07807479 inosine 5-monophosphate dehydrogenase; Validated 92.82
PRK06843404 inosine 5-monophosphate dehydrogenase; Validated 92.71
PTZ00170228 D-ribulose-5-phosphate 3-epimerase; Provisional 92.49
cd00958235 DhnA Class I fructose-1,6-bisphosphate (FBP) aldol 92.4
PRK13125244 trpA tryptophan synthase subunit alpha; Provisiona 92.28
TIGR03151307 enACPred_II putative enoyl-(acyl-carrier-protein) 92.13
cd00429211 RPE Ribulose-5-phosphate 3-epimerase (RPE). This e 92.13
PRK08745223 ribulose-phosphate 3-epimerase; Provisional 92.09
PRK09722229 allulose-6-phosphate 3-epimerase; Provisional 92.02
PF04551359 GcpE: GcpE protein; InterPro: IPR004588 This prote 91.96
PLN02591250 tryptophan synthase 91.94
cd02940299 DHPD_FMN Dihydropyrimidine dehydrogenase (DHPD) FM 91.81
cd04740296 DHOD_1B_like Dihydroorotate dehydrogenase (DHOD) c 91.6
PRK08318420 dihydropyrimidine dehydrogenase subunit B; Validat 91.57
COG0821361 gcpE 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphat 91.3
PRK07565334 dihydroorotate dehydrogenase 2; Reviewed 91.07
PRK05458326 guanosine 5'-monophosphate oxidoreductase; Provisi 90.92
cd04726202 KGPDC_HPS 3-Keto-L-gulonate 6-phosphate decarboxyl 90.86
PF00311 794 PEPcase: Phosphoenolpyruvate carboxylase; InterPro 90.83
PRK05581220 ribulose-phosphate 3-epimerase; Validated 90.75
cd07939259 DRE_TIM_NifV Streptomyces rubellomurinus FrbC and 90.66
PRK05567486 inosine 5'-monophosphate dehydrogenase; Reviewed 90.56
COG2352 910 Ppc Phosphoenolpyruvate carboxylase [Energy produc 90.41
cd04730236 NPD_like 2-Nitropropane dioxygenase (NPD), one of 90.24
PF14010 491 PEPcase_2: Phosphoenolpyruvate carboxylase; PDB: 3 90.16
CHL00200263 trpA tryptophan synthase alpha subunit; Provisiona 89.9
PLN02334229 ribulose-phosphate 3-epimerase 89.88
PF00290259 Trp_syntA: Tryptophan synthase alpha chain; InterP 89.82
PRK13813215 orotidine 5'-phosphate decarboxylase; Provisional 89.68
PRK13307391 bifunctional formaldehyde-activating enzyme/3-hexu 88.83
TIGR01163210 rpe ribulose-phosphate 3-epimerase. This family co 88.45
PRK00915 513 2-isopropylmalate synthase; Validated 88.2
PRK15452 443 putative protease; Provisional 87.81
PRK01130221 N-acetylmannosamine-6-phosphate 2-epimerase; Provi 87.49
PRK07695201 transcriptional regulator TenI; Provisional 87.38
cd02810289 DHOD_DHPD_FMN Dihydroorotate dehydrogenase (DHOD) 87.33
TIGR00262256 trpA tryptophan synthase, alpha subunit. Tryptopha 87.2
cd04722200 TIM_phosphate_binding TIM barrel proteins share a 87.18
cd07945280 DRE_TIM_CMS Leptospira interrogans citramalate syn 86.93
TIGR02660 365 nifV_homocitr homocitrate synthase NifV. This fami 86.87
PRK07226267 fructose-bisphosphate aldolase; Provisional 86.83
PRK07028 430 bifunctional hexulose-6-phosphate synthase/ribonuc 86.63
cd03174265 DRE_TIM_metallolyase DRE-TIM metallolyase superfam 86.09
PRK04302223 triosephosphate isomerase; Provisional 86.03
TIGR02090 363 LEU1_arch isopropylmalate/citramalate/homocitrate 85.93
TIGR00973 494 leuA_bact 2-isopropylmalate synthase, bacterial ty 85.72
PRK11858 378 aksA trans-homoaconitate synthase; Reviewed 85.69
TIGR01303475 IMP_DH_rel_1 IMP dehydrogenase family protein. Thi 85.48
cd07944266 DRE_TIM_HOA_like 4-hydroxy-2-oxovalerate aldolase- 85.38
PRK00278260 trpC indole-3-glycerol-phosphate synthase; Reviewe 85.11
PRK02290 344 3-dehydroquinate synthase; Provisional 84.75
PF00478352 IMPDH: IMP dehydrogenase / GMP reductase domain; I 84.5
PRK00278260 trpC indole-3-glycerol-phosphate synthase; Reviewe 84.46
cd04739325 DHOD_like Dihydroorotate dehydrogenase (DHOD) like 84.38
PF00682237 HMGL-like: HMGL-like of this family is not conserv 84.05
cd00945201 Aldolase_Class_I Class I aldolases. The class I al 83.63
PRK02048 611 4-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha 83.57
PRK09389 488 (R)-citramalate synthase; Provisional 83.37
PRK00366360 ispG 4-hydroxy-3-methylbut-2-en-1-yl diphosphate s 83.24
cd00958235 DhnA Class I fructose-1,6-bisphosphate (FBP) aldol 83.15
PRK06015201 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphog 82.98
cd00331217 IGPS Indole-3-glycerol phosphate synthase (IGPS); 82.85
PRK08005210 epimerase; Validated 82.67
cd04732234 HisA HisA. Phosphoribosylformimino-5-aminoimidazol 82.55
PRK08091228 ribulose-phosphate 3-epimerase; Validated 82.25
cd00381325 IMPDH IMPDH: The catalytic domain of the inosine m 82.17
TIGR03128206 RuMP_HxlA 3-hexulose-6-phosphate synthase. at the 82.17
PRK06512221 thiamine-phosphate pyrophosphorylase; Provisional 81.33
TIGR00977 526 LeuA_rel 2-isopropylmalate synthase/homocitrate sy 81.12
PLN02495385 oxidoreductase, acting on the CH-CH group of donor 81.08
COG0826 347 Collagenase and related proteases [Posttranslation 80.86
PLN02746347 hydroxymethylglutaryl-CoA lyase 80.39
PF01959 354 DHQS: 3-dehydroquinate synthase (EC 4.6.1.3); Inte 80.36
>PLN02762 pyruvate kinase complex alpha subunit Back     alignment and domain information 
Probab=100.00  E-value=2.2e-113  Score=892.51  Aligned_cols=381  Identities=27%  Similarity=0.449  Sum_probs=360.8

Q ss_pred             CCCeEEEEecCCCCCCHHHHHHHHHcCCCEEEEeccCCCHHHHHHHHHHHHHHHHhcCCceEEEEecCCCeEEEeecCC-
Q 014746           27 PAMTKIVGTLGPRSRSVEIISGCLNAGMSVARFDFSWGDTAYHQETLENLKIAIKSTKKLCAVMLDTIGPELLVVTKTE-  105 (419)
Q Consensus        27 ~~~tkIi~TiGp~~~~~~~i~~li~~Gm~v~RiN~SHg~~e~~~~~i~~ir~a~~~~~~~i~Il~Dl~GPkIR~~~~~~-  105 (419)
                      +|+|||||||||+|+++|+|++|+++|||+||||||||++++|+++++++|+++++.|++++||+|||||||||+...+ 
T Consensus        24 ~rrTKIV~TiGPas~~~e~l~~li~aGm~v~RlNfSHg~~e~h~~~i~~iR~~~~~~~~~vaIl~Dl~GPkIR~g~~~~~  103 (509)
T PLN02762         24 TRRTKLVCTIGPACCGFEQLEALAMGGMNVARLNMCHGTREWHRDVIRRVRRLNEEKGFAVAVMMDTEGSEIHMGDLGGA  103 (509)
T ss_pred             CCCceEEEEeCCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHcCCceEEEecCCCCceEEEecCCC
Confidence            6899999999999999999999999999999999999999999999999999999999999999999999999987765 


Q ss_pred             CcEEeeCCCEEEEeeCCCCCC--CcCeEeccCcccchhcCCCCEEEeeccccCCceEEEEEEEEEeecCCeEEEEEEeCc
Q 014746          106 HPISLLADESVVLTPDQDKEA--TSNLLPINFSGLSKAVKKGDTIFIGQYLFTGNETTSVMLEVTDVDGEDVVCQIKNSA  183 (419)
Q Consensus       106 ~~i~l~~G~~v~lt~~~~~~~--~~~~i~v~~~~l~~~v~~Gd~I~id~~~~DG~i~l~V~l~v~~v~~~~i~~~v~~gG  183 (419)
                      +++.|++||.|+|+.+. ..+  +.+.++++|++|++.+++||.||+|    ||+|.|+|    .+++++.++|+|.+||
T Consensus       104 ~~i~l~~G~~v~lt~~~-~~g~~~~~~i~v~y~~l~~~v~~Gd~Ilid----DG~i~l~V----~~~~~~~v~~~v~~~G  174 (509)
T PLN02762        104 SSAKAEDGEEWTFTVRK-FDGSRPEFTIQVNYDGFAEDVKVGDELVVD----GGMVRFEV----IEKIGPDVKCKCTDPG  174 (509)
T ss_pred             ccEEecCCCEEEEeCCc-cCCCCCCcEEeechHHHHHhcCCCCEEEEe----CCEEEEEE----EEEECCEEEEEEEeCc
Confidence            57999999999999863 344  3578999999999999999999999    99999999    5557899999999999


Q ss_pred             EEecCCcceee-------cCceecCCCCCccCHHHHHHHhhhcCCcEEEEecCCCHHHHHHHHHHHHhcCCCCCceEEEE
Q 014746          184 ILARQLYTLHV-------SQIRIDLPTLTDKDKEVISTWGARNNIDFLSLSHTRGAEDVRHARDFLSQLGDLGQTQIFAK  256 (419)
Q Consensus       184 ~l~~~~Kgvnl-------p~~~~~lp~lte~D~~di~~~~l~~g~d~I~lsfV~saedv~~v~~~l~~~~~~~~~~IiaK  256 (419)
                      .| +++||||+       ||+.+++|+|||+|++||. |++++++|||++|||++++||+++|++|.+.+...+++||||
T Consensus       175 ~l-~~~KgvNl~~~g~~~p~~~~~lp~ltekD~~di~-f~~~~~vD~ia~SFVr~a~Dv~~~r~~l~~~g~~~~~~IiAK  252 (509)
T PLN02762        175 LL-LPRANLTFWRDGSLVRERNAMLPTISSKDWLDID-FGISEGVDFIAVSFVKSAEVIKHLKSYIAARSRDSDIGVIAK  252 (509)
T ss_pred             EE-cCCCceeeccccCCCCCCccCCCCCCHHHHHHHH-HHHHcCCCEEEECCCCCHHHHHHHHHHHHHcCCCCCceEEEE
Confidence            99 99999999       9999999999999999996 999999999999999999999999999998763237899999


Q ss_pred             ecCHHhHhhHHHHHhhCcEEEEeCCCccCCCCchhHHHHHHHHHHHHHHcCCcEEE-EccccccccCCCcchhhHhHHHH
Q 014746          257 IENTEGLTHFDEILHEADGIILARGNLGVDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVAN  335 (419)
Q Consensus       257 IEt~~gv~nl~eI~~~sDgImIargDLg~elg~e~v~~~qk~Ii~a~~~~gkpvi~-TqmLeSM~~~~~PtraEv~Dv~n  335 (419)
                      ||+++|++|++||+++||||||||||||+|+|++++|.+||+|++.|+.+|||||+ |||||||++||+|||||++||||
T Consensus       253 IE~~~av~nl~eIi~~sDgiMVARGDLGvEip~e~vp~~QK~II~~c~~~gKPVIvATQmLeSMi~np~PTRAEvsDVaN  332 (509)
T PLN02762        253 IESLDSLKNLEEIIRASDGAMVARGDLGAQIPLEQVPSVQEKIVRLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSE  332 (509)
T ss_pred             eCCHHHHHHHHHHHHhcCEEEEecCccccccCHHHhHHHHHHHHHHHHHhCCCEEEECchHHhhhhCCCCCchhHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999 99999999999999999999999


Q ss_pred             HHHcCCceEEecccccCCCCHHHHHHHHHHHHHHHhc-------------------------------------------
Q 014746          336 AVLDGSDAILLGAETLRGLYPVETISIVGKICAEAKT-------------------------------------------  372 (419)
Q Consensus       336 av~~G~D~vmLs~ETa~G~yP~eaV~~~~~I~~~aE~-------------------------------------------  372 (419)
                      ||+||+||+|||+|||+|+||+|||++|++||+++|+                                           
T Consensus       333 AVlDGtDavMLSgETA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~~~aia~sa~~~A~~l~a~a  412 (509)
T PLN02762        333 AVRQRADALMLSGESAMGLYPEKALSVLRSVSLRMELWSREEKRHEALELPQLSSSLSDRISEEICNSAAKMANNLGVDA  412 (509)
T ss_pred             HHHhCCCEEEEcchhcCCCCHHHHHHHHHHHHHHHHhhhhhcchhhhhhhhccccccccchHHHHHHHHHHHHhhcCCCE
Confidence            9999999999999999999999999999999997773                                           


Q ss_pred             ------------------------------------------------CCcChHHHHHHHHHHHHHCCCCCCCCEEEEEe
Q 014746          373 ------------------------------------------------TNATSESALKVALDYGKAHGVIKSHDRVVICQ  404 (419)
Q Consensus       373 ------------------------------------------------~~~~~~~~~~~a~~~~~~~~~~~~gd~vv~~~  404 (419)
                                                                      ...+.+++++.+.++++++|++++||.||+++
T Consensus       413 Iv~~T~sG~tA~~iSk~RP~~pIia~t~~~~~~r~l~l~~GV~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~GD~VVv~~  492 (509)
T PLN02762        413 IFVYTKHGHMASLLSRNRPDCPIFAFTDTTSVRRRLNLQWGLIPFRLDFSDDMESNLNKTFSLLKARGMIKSGDLVIAVS  492 (509)
T ss_pred             EEEECCCcHHHHHHHhhCCCCCEEEECCCHHHHHHhhcccCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCCCCEEEEEe
Confidence                                                            01367899999999999999999999999999


Q ss_pred             ec---CCccEEEEEEcC
Q 014746          405 KV---GDSAVVKIMELE  418 (419)
Q Consensus       405 g~---g~tn~~~i~~~~  418 (419)
                      |+   |+||+|||.++|
T Consensus       493 g~~~~g~tn~i~v~~v~  509 (509)
T PLN02762        493 DLTPSSMLQSIQVRNVP  509 (509)
T ss_pred             CCCCCCCceEEEEEEcC
Confidence            97   999999999885

>PTZ00066 pyruvate kinase; Provisional Back     alignment and domain information
>PLN02461 Probable pyruvate kinase Back     alignment and domain information
>PLN02765 pyruvate kinase Back     alignment and domain information
>COG0469 PykF Pyruvate kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK09206 pyruvate kinase; Provisional Back     alignment and domain information
>PRK06247 pyruvate kinase; Provisional Back     alignment and domain information
>cd00288 Pyruvate_Kinase Pyruvate kinase (PK): Large allosteric enzyme that regulates glycolysis through binding of the substrate, phosphoenolpyruvate, and one or more allosteric effectors Back     alignment and domain information
>PRK06354 pyruvate kinase; Provisional Back     alignment and domain information
>PRK05826 pyruvate kinase; Provisional Back     alignment and domain information
>PRK06739 pyruvate kinase; Validated Back     alignment and domain information
>PF00224 PK: Pyruvate kinase, barrel domain; InterPro: IPR015793 Pyruvate kinase (2 Back     alignment and domain information
>PLN02623 pyruvate kinase Back     alignment and domain information
>PTZ00300 pyruvate kinase; Provisional Back     alignment and domain information
>TIGR01064 pyruv_kin pyruvate kinase Back     alignment and domain information
>KOG2323 consensus Pyruvate kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK14725 pyruvate kinase; Provisional Back     alignment and domain information
>PRK08187 pyruvate kinase; Validated Back     alignment and domain information
>TIGR03239 GarL 2-dehydro-3-deoxyglucarate aldolase Back     alignment and domain information
>PRK10558 alpha-dehydro-beta-deoxy-D-glucarate aldolase; Provisional Back     alignment and domain information
>PRK10128 2-keto-3-deoxy-L-rhamnonate aldolase; Provisional Back     alignment and domain information
>COG3836 HpcH 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR02311 HpaI 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase Back     alignment and domain information
>PF03328 HpcH_HpaI: HpcH/HpaI aldolase/citrate lyase family; InterPro: IPR005000 This family includes 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (4 Back     alignment and domain information
>TIGR01588 citE citrate lyase, beta subunit Back     alignment and domain information
>TIGR01418 PEP_synth phosphoenolpyruvate synthase Back     alignment and domain information
>PRK06464 phosphoenolpyruvate synthase; Validated Back     alignment and domain information
>TIGR01417 PTS_I_fam phosphoenolpyruvate-protein phosphotransferase Back     alignment and domain information
>PRK11177 phosphoenolpyruvate-protein phosphotransferase; Provisional Back     alignment and domain information
>COG2301 CitE Citrate lyase beta subunit [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR01344 malate_syn_A malate synthase A Back     alignment and domain information
>cd00727 malate_synt_A Malate synthase A (MSA), present in some bacteria, plants and fungi Back     alignment and domain information
>PRK09255 malate synthase; Validated Back     alignment and domain information
>cd00480 malate_synt Malate synthase catalyzes the Claisen condensation of glyoxylate and acetyl-CoA to malyl-CoA , which hydrolyzes to malate and CoA Back     alignment and domain information
>PF02896 PEP-utilizers_C: PEP-utilising enzyme, TIM barrel domain; InterPro: IPR000121 A number of enzymes that catalyze the transfer of a phosphoryl group from phosphoenolpyruvate (PEP) via a phospho-histidine intermediate have been shown to be structurally related [, , , ] Back     alignment and domain information
>PLN02626 malate synthase Back     alignment and domain information
>PF02887 PK_C: Pyruvate kinase, alpha/beta domain; InterPro: IPR015795 Pyruvate kinase (2 Back     alignment and domain information
>PRK11061 fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain; Provisional Back     alignment and domain information
>TIGR01828 pyru_phos_dikin pyruvate, phosphate dikinase Back     alignment and domain information
>TIGR02751 PEPCase_arch phosphoenolpyruvate carboxylase, archaeal type Back     alignment and domain information
>COG1080 PtsA Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK09279 pyruvate phosphate dikinase; Provisional Back     alignment and domain information
>PRK08649 inosine 5-monophosphate dehydrogenase; Validated Back     alignment and domain information
>COG3605 PtsP Signal transduction protein containing GAF and PtsI domains [Signal transduction mechanisms] Back     alignment and domain information
>PRK13655 phosphoenolpyruvate carboxylase; Provisional Back     alignment and domain information
>TIGR01304 IMP_DH_rel_2 IMP dehydrogenase family protein Back     alignment and domain information
>PF00478 IMPDH: IMP dehydrogenase / GMP reductase domain; InterPro: IPR001093 Synonym(s): Inosine-5'-monophosphate dehydrogenase, Inosinic acid dehydrogenase; Synonym(s): Guanosine 5'-monophosphate oxidoreductase This entry contains two related enzymes IMP dehydrogenase and GMP reducatase Back     alignment and domain information
>PRK00009 phosphoenolpyruvate carboxylase; Reviewed Back     alignment and domain information
>cd00381 IMPDH IMPDH: The catalytic domain of the inosine monophosphate dehydrogenase Back     alignment and domain information
>TIGR01305 GMP_reduct_1 guanosine monophosphate reductase, eukaryotic Back     alignment and domain information
>TIGR01302 IMP_dehydrog inosine-5'-monophosphate dehydrogenase Back     alignment and domain information
>PTZ00398 phosphoenolpyruvate carboxylase; Provisional Back     alignment and domain information
>PTZ00314 inosine-5'-monophosphate dehydrogenase; Provisional Back     alignment and domain information
>PLN02274 inosine-5'-monophosphate dehydrogenase Back     alignment and domain information
>TIGR01306 GMP_reduct_2 guanosine monophosphate reductase, bacterial Back     alignment and domain information
>PRK05096 guanosine 5'-monophosphate oxidoreductase; Provisional Back     alignment and domain information
>PRK08883 ribulose-phosphate 3-epimerase; Provisional Back     alignment and domain information
>COG0574 PpsA Phosphoenolpyruvate synthase/pyruvate phosphate dikinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00612 ispG_gcpE 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase Back     alignment and domain information
>PRK07107 inosine 5-monophosphate dehydrogenase; Validated Back     alignment and domain information
>PRK07807 inosine 5-monophosphate dehydrogenase; Validated Back     alignment and domain information
>PRK06843 inosine 5-monophosphate dehydrogenase; Validated Back     alignment and domain information
>PTZ00170 D-ribulose-5-phosphate 3-epimerase; Provisional Back     alignment and domain information
>cd00958 DhnA Class I fructose-1,6-bisphosphate (FBP) aldolases of the archaeal type (DhnA homologs) found in bacteria and archaea Back     alignment and domain information
>PRK13125 trpA tryptophan synthase subunit alpha; Provisional Back     alignment and domain information
>TIGR03151 enACPred_II putative enoyl-(acyl-carrier-protein) reductase II Back     alignment and domain information
>cd00429 RPE Ribulose-5-phosphate 3-epimerase (RPE) Back     alignment and domain information
>PRK08745 ribulose-phosphate 3-epimerase; Provisional Back     alignment and domain information
>PRK09722 allulose-6-phosphate 3-epimerase; Provisional Back     alignment and domain information
>PF04551 GcpE: GcpE protein; InterPro: IPR004588 This protein previously of unknown biochemical function is essential in Escherichia coli Back     alignment and domain information
>PLN02591 tryptophan synthase Back     alignment and domain information
>cd02940 DHPD_FMN Dihydropyrimidine dehydrogenase (DHPD) FMN-binding domain Back     alignment and domain information
>cd04740 DHOD_1B_like Dihydroorotate dehydrogenase (DHOD) class 1B FMN-binding domain Back     alignment and domain information
>PRK08318 dihydropyrimidine dehydrogenase subunit B; Validated Back     alignment and domain information
>COG0821 gcpE 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase [Lipid metabolism] Back     alignment and domain information
>PRK07565 dihydroorotate dehydrogenase 2; Reviewed Back     alignment and domain information
>PRK05458 guanosine 5'-monophosphate oxidoreductase; Provisional Back     alignment and domain information
>cd04726 KGPDC_HPS 3-Keto-L-gulonate 6-phosphate decarboxylase (KGPDC) and D-arabino-3-hexulose-6-phosphate synthase (HPS) Back     alignment and domain information
>PF00311 PEPcase: Phosphoenolpyruvate carboxylase; InterPro: IPR021135 Phosphoenolpyruvate carboxylase (PEPCase), an enzyme found in all multicellular plants, catalyses the formation of oxaloacetate from phosphoenolpyruvate (PEP) and a hydrocarbonate ion [] Back     alignment and domain information
>PRK05581 ribulose-phosphate 3-epimerase; Validated Back     alignment and domain information
>cd07939 DRE_TIM_NifV Streptomyces rubellomurinus FrbC and related proteins, catalytic TIM barrel domain Back     alignment and domain information
>PRK05567 inosine 5'-monophosphate dehydrogenase; Reviewed Back     alignment and domain information
>COG2352 Ppc Phosphoenolpyruvate carboxylase [Energy production and conversion] Back     alignment and domain information
>cd04730 NPD_like 2-Nitropropane dioxygenase (NPD), one of the nitroalkane oxidizing enzyme families, catalyzes oxidative denitrification of nitroalkanes to their corresponding carbonyl compounds and nitrites Back     alignment and domain information
>PF14010 PEPcase_2: Phosphoenolpyruvate carboxylase; PDB: 3ODM_C Back     alignment and domain information
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional Back     alignment and domain information
>PLN02334 ribulose-phosphate 3-epimerase Back     alignment and domain information
>PF00290 Trp_syntA: Tryptophan synthase alpha chain; InterPro: IPR002028 Tryptophan synthase (4 Back     alignment and domain information
>PRK13813 orotidine 5'-phosphate decarboxylase; Provisional Back     alignment and domain information
>PRK13307 bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase; Provisional Back     alignment and domain information
>TIGR01163 rpe ribulose-phosphate 3-epimerase Back     alignment and domain information
>PRK00915 2-isopropylmalate synthase; Validated Back     alignment and domain information
>PRK15452 putative protease; Provisional Back     alignment and domain information
>PRK01130 N-acetylmannosamine-6-phosphate 2-epimerase; Provisional Back     alignment and domain information
>PRK07695 transcriptional regulator TenI; Provisional Back     alignment and domain information
>cd02810 DHOD_DHPD_FMN Dihydroorotate dehydrogenase (DHOD) and Dihydropyrimidine dehydrogenase (DHPD) FMN-binding domain Back     alignment and domain information
>TIGR00262 trpA tryptophan synthase, alpha subunit Back     alignment and domain information
>cd04722 TIM_phosphate_binding TIM barrel proteins share a structurally conserved phosphate binding motif and in general share an eight beta/alpha closed barrel structure Back     alignment and domain information
>cd07945 DRE_TIM_CMS Leptospira interrogans citramalate synthase (CMS) and related proteins, N-terminal catalytic TIM barrel domain Back     alignment and domain information
>TIGR02660 nifV_homocitr homocitrate synthase NifV Back     alignment and domain information
>PRK07226 fructose-bisphosphate aldolase; Provisional Back     alignment and domain information
>PRK07028 bifunctional hexulose-6-phosphate synthase/ribonuclease regulator; Validated Back     alignment and domain information
>cd03174 DRE_TIM_metallolyase DRE-TIM metallolyase superfamily Back     alignment and domain information
>PRK04302 triosephosphate isomerase; Provisional Back     alignment and domain information
>TIGR02090 LEU1_arch isopropylmalate/citramalate/homocitrate synthases Back     alignment and domain information
>TIGR00973 leuA_bact 2-isopropylmalate synthase, bacterial type Back     alignment and domain information
>PRK11858 aksA trans-homoaconitate synthase; Reviewed Back     alignment and domain information
>TIGR01303 IMP_DH_rel_1 IMP dehydrogenase family protein Back     alignment and domain information
>cd07944 DRE_TIM_HOA_like 4-hydroxy-2-oxovalerate aldolase-like, N-terminal catalytic TIM barrel domain Back     alignment and domain information
>PRK00278 trpC indole-3-glycerol-phosphate synthase; Reviewed Back     alignment and domain information
>PRK02290 3-dehydroquinate synthase; Provisional Back     alignment and domain information
>PF00478 IMPDH: IMP dehydrogenase / GMP reductase domain; InterPro: IPR001093 Synonym(s): Inosine-5'-monophosphate dehydrogenase, Inosinic acid dehydrogenase; Synonym(s): Guanosine 5'-monophosphate oxidoreductase This entry contains two related enzymes IMP dehydrogenase and GMP reducatase Back     alignment and domain information
>PRK00278 trpC indole-3-glycerol-phosphate synthase; Reviewed Back     alignment and domain information
>cd04739 DHOD_like Dihydroorotate dehydrogenase (DHOD) like proteins Back     alignment and domain information
>PF00682 HMGL-like: HMGL-like of this family is not conserved in other members Back     alignment and domain information
>cd00945 Aldolase_Class_I Class I aldolases Back     alignment and domain information
>PRK02048 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Provisional Back     alignment and domain information
>PRK09389 (R)-citramalate synthase; Provisional Back     alignment and domain information
>PRK00366 ispG 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Reviewed Back     alignment and domain information
>cd00958 DhnA Class I fructose-1,6-bisphosphate (FBP) aldolases of the archaeal type (DhnA homologs) found in bacteria and archaea Back     alignment and domain information
>PRK06015 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional Back     alignment and domain information
>cd00331 IGPS Indole-3-glycerol phosphate synthase (IGPS); an enzyme in the tryptophan biosynthetic pathway, catalyzing the ring closure reaction of 1-(o-carboxyphenylamino)-1-deoxyribulose-5-phosphate (CdRP) to indole-3-glycerol phosphate (IGP), accompanied by the release of carbon dioxide and water Back     alignment and domain information
>PRK08005 epimerase; Validated Back     alignment and domain information
>cd04732 HisA HisA Back     alignment and domain information
>PRK08091 ribulose-phosphate 3-epimerase; Validated Back     alignment and domain information
>cd00381 IMPDH IMPDH: The catalytic domain of the inosine monophosphate dehydrogenase Back     alignment and domain information
>TIGR03128 RuMP_HxlA 3-hexulose-6-phosphate synthase Back     alignment and domain information
>PRK06512 thiamine-phosphate pyrophosphorylase; Provisional Back     alignment and domain information
>TIGR00977 LeuA_rel 2-isopropylmalate synthase/homocitrate synthase family protein Back     alignment and domain information
>PLN02495 oxidoreductase, acting on the CH-CH group of donors Back     alignment and domain information
>COG0826 Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PLN02746 hydroxymethylglutaryl-CoA lyase Back     alignment and domain information
>PF01959 DHQS: 3-dehydroquinate synthase (EC 4 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query419
3eoe_A511 Crystal Structure Of Pyruvate Kinase From Toxoplasm 1e-67
4drs_A526 Crystal Structure Of Cryptosporidium Parvum Pyruvat 6e-65
3ma8_A534 Crystal Structure Of Cgd1_2040, A Pyruvate Kinase F 7e-65
3khd_A520 Crystal Structure Of Pff1300w. Length = 520 6e-64
1pky_A470 Pyruvate Kinase From E. Coli In The T-State Length 3e-62
1e0u_A470 Structure R271l Mutant Of E. Coli Pyruvate Kinase L 4e-62
1e0t_A470 R292d Mutant Of E. Coli Pyruvate Kinase Length = 47 3e-61
2e28_A 587 Crystal Structure Analysis Of Pyruvate Kinase From 1e-57
3t05_A 606 Crystal Structure Of S. Aureus Pyruvate Kinase Leng 4e-57
4ima_A543 The Structure Of C436m-hlpyk In Complex With Citrat 2e-56
3qv9_A499 Crystal Structure Of Trypanosoma Cruzi Pyruvate Kin 3e-56
2vgg_A528 Human Erythrocyte Pyruvate Kinase: R479h Mutant Len 4e-56
4ip7_A543 Structure Of The S12d Variant Of Human Liver Pyruva 4e-56
2vgb_A528 Human Erythrocyte Pyruvate Kinase Length = 528 4e-56
2vgi_A528 Human Erythrocyte Pyruvate Kinase: R486w Mutant Len 5e-56
2vgf_A528 Human Erythrocyte Pyruvate Kinase: T384m Mutant Len 2e-55
4b2d_D548 Human Pkm2 With L-serine And Fbp Bound Length = 548 3e-55
3bjt_A530 Pyruvate Kinase M2 Is A Phosphotyrosine Binding Pro 3e-55
3bjf_A518 Pyruvate Kinase M2 Is A Phosphotyrosine Binding Pro 3e-55
1t5a_A567 Human Pyruvate Kinase M2 Length = 567 4e-55
3srf_C551 Human M1 Pyruvate Kinase Length = 551 4e-55
3srd_A551 Human M2 Pyruvate Kinase In Complex With Fructose 1 4e-55
1pkm_A530 The Refined Three-Dimensional Structure Of Cat Musc 4e-55
3gqy_A550 Activator-Bound Structure Of Human Pyruvate Kinase 4e-55
3u2z_A533 Activator-Bound Structure Of Human Pyruvate Kinase 5e-55
3g2g_A533 S437y Mutant Of Human Muscle Pyruvate Kinase, Isofo 5e-55
1zjh_A548 Structure Of Human Muscle Pyruvate Kinase (Pkm2) Le 6e-55
4g1n_A518 Pkm2 In Complex With An Activator Length = 518 6e-55
1f3w_A530 Recombinant Rabbit Muscle Pyruvate Kinase Length = 1e-54
1pkl_A499 The Structure Of Leishmania Pyruvate Kinase Length 1e-54
2g50_A530 The Location Of The Allosteric Amino Acid Binding S 1e-54
3pp7_A498 Crystal Structure Of Leishmania Mexicana Pyruvate K 1e-54
3n25_A531 The Structure Of Muscle Pyruvate Kinase In Complex 1e-54
1aqf_A530 Pyruvate Kinase From Rabbit Muscle With Mg, K, And 1e-54
1f3x_A530 S402p Mutant Of Rabbit Muscle Pyruvate Kinase Lengt 1e-54
1pkn_A530 Structure Of Rabbit Muscle Pyruvate Kinase Complexe 1e-54
3e0v_A539 Crystal Structure Of Pyruvate Kinase From Leishmani 1e-54
1a3w_A500 Pyruvate Kinase From Saccharomyces Cerevisiae Compl 1e-47
3qtg_A461 Crystal Structure Of Pyruvate Kinase From Pyrobacul 4e-21
>pdb|3EOE|A Chain A, Crystal Structure Of Pyruvate Kinase From Toxoplasma Gondii, 55.M00007 Length = 511 Back     alignment and structure 
Iteration: 1

 Score =  253 bits (646), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 142/365 (38%), Positives = 223/365 (61%), Gaps = 15/365 (4%)
Query: 12  IRMASILEP-SKPTFFPAMTKIVGTLGPRSRSVEIISGCLNAGMSVARFDFSWGDTAYHQ 70
           IRM+ ILEP S+  +    T+IV T+GP   +V+ +   ++AGM+V R +FS GD   H 
Sbjct: 19  IRMSQILEPRSEEDWTAHRTRIVCTMGPACWNVDTLVKMIDAGMNVCRLNFSHGDHETHA 78
Query: 71  ETLENLKIAIKSTKKL-CAVMLDTIGPELLVVTKTEH-PISLLADESVVLTPDQDKEATS 128
            T++N++ A+K   +   A++LDT GPE+      +H PI+L    ++ +  D +     
Sbjct: 79  RTVQNIQEAMKQRPEARLAILLDTKGPEIRTGFLKDHKPITLQQGATLKIVTDYNLIGDE 138
Query: 129 NLLPINFSGLSKAVKKGDTIFIGQYLFTGNETTSVMLEVTDVDGEDVVCQIKNSAILARQ 188
             +  ++  L ++VK G+TI I           S+ ++V +V  + V+ Q +N+A +  +
Sbjct: 139 TTIACSYGALPQSVKPGNTILIAD--------GSLSVKVVEVGSDYVITQAQNTATIGER 190
Query: 189 LYTLHVSQIRIDLPTLTDKDKEVISTWGARNNIDFLSLSHTRGAEDVRHARDFLSQLGDL 248
              +++  +++ LP + +KDK  I  +G     +F++ S  + A+DVR+ R  L   G  
Sbjct: 191 -KNMNLPNVKVQLPVIGEKDKHDILNFGIPMGCNFIAASFVQSADDVRYIRGLLGPRGR- 248
Query: 249 GQTQIFAKIENTEGLTHFDEILHEADGIILARGNLGVDLPPEKVFLFQKAALYKCNMAGK 308
              +I  KIEN EGL +FDEIL EADGI++ARG+LG+++PPEKVFL QK  + KCN+ GK
Sbjct: 249 -HIRIIPKIENVEGLVNFDEILAEADGIMIARGDLGMEIPPEKVFLAQKMMIAKCNVVGK 307
Query: 309 PAV-VTRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKIC 367
           P +  T++++SM  N RPTRAEA DVANAVLDG+D ++L  ET  G +PV T+  + +IC
Sbjct: 308 PVITATQMLESMIKNPRPTRAEAADVANAVLDGTDCVMLSGETANGEFPVITVETMARIC 367
Query: 368 AEAKT 372
            EA+T
Sbjct: 368 YEAET 372
>pdb|4DRS|A Chain A, Crystal Structure Of Cryptosporidium Parvum Pyruvate Kinase Length = 526 Back     alignment and structure
>pdb|3MA8|A Chain A, Crystal Structure Of Cgd1_2040, A Pyruvate Kinase From Cryptosporidium Parvum Length = 534 Back     alignment and structure
>pdb|3KHD|A Chain A, Crystal Structure Of Pff1300w. Length = 520 Back     alignment and structure
>pdb|1PKY|A Chain A, Pyruvate Kinase From E. Coli In The T-State Length = 470 Back     alignment and structure
>pdb|1E0U|A Chain A, Structure R271l Mutant Of E. Coli Pyruvate Kinase Length = 470 Back     alignment and structure
>pdb|1E0T|A Chain A, R292d Mutant Of E. Coli Pyruvate Kinase Length = 470 Back     alignment and structure
>pdb|2E28|A Chain A, Crystal Structure Analysis Of Pyruvate Kinase From Bacillus Stearothermophilus Length = 587 Back     alignment and structure
>pdb|3T05|A Chain A, Crystal Structure Of S. Aureus Pyruvate Kinase Length = 606 Back     alignment and structure
>pdb|4IMA|A Chain A, The Structure Of C436m-hlpyk In Complex With Citrate/mn/atp/fru-1,6-bp Length = 543 Back     alignment and structure
>pdb|3QV9|A Chain A, Crystal Structure Of Trypanosoma Cruzi Pyruvate Kinase(Tcpyk)in Complex With Ponceau S. Length = 499 Back     alignment and structure
>pdb|2VGG|A Chain A, Human Erythrocyte Pyruvate Kinase: R479h Mutant Length = 528 Back     alignment and structure
>pdb|4IP7|A Chain A, Structure Of The S12d Variant Of Human Liver Pyruvate Kinase In Complex With Citrate And Fbp. Length = 543 Back     alignment and structure
>pdb|2VGB|A Chain A, Human Erythrocyte Pyruvate Kinase Length = 528 Back     alignment and structure
>pdb|2VGI|A Chain A, Human Erythrocyte Pyruvate Kinase: R486w Mutant Length = 528 Back     alignment and structure
>pdb|2VGF|A Chain A, Human Erythrocyte Pyruvate Kinase: T384m Mutant Length = 528 Back     alignment and structure
>pdb|4B2D|D Chain D, Human Pkm2 With L-serine And Fbp Bound Length = 548 Back     alignment and structure
>pdb|3BJT|A Chain A, Pyruvate Kinase M2 Is A Phosphotyrosine Binding Protein Length = 530 Back     alignment and structure
>pdb|3BJF|A Chain A, Pyruvate Kinase M2 Is A Phosphotyrosine Binding Protein Length = 518 Back     alignment and structure
>pdb|1T5A|A Chain A, Human Pyruvate Kinase M2 Length = 567 Back     alignment and structure
>pdb|3SRF|C Chain C, Human M1 Pyruvate Kinase Length = 551 Back     alignment and structure
>pdb|3SRD|A Chain A, Human M2 Pyruvate Kinase In Complex With Fructose 1-6 Bisphosphate And Oxalate. Length = 551 Back     alignment and structure
>pdb|1PKM|A Chain A, The Refined Three-Dimensional Structure Of Cat Muscle (M1) Pyruvate Kinase, At A Resolution Of 2.6 Angstroms Length = 530 Back     alignment and structure
>pdb|3GQY|A Chain A, Activator-Bound Structure Of Human Pyruvate Kinase M2 Length = 550 Back     alignment and structure
>pdb|3U2Z|A Chain A, Activator-Bound Structure Of Human Pyruvate Kinase M2 Length = 533 Back     alignment and structure
>pdb|3G2G|A Chain A, S437y Mutant Of Human Muscle Pyruvate Kinase, Isoform M2 Length = 533 Back     alignment and structure
>pdb|1ZJH|A Chain A, Structure Of Human Muscle Pyruvate Kinase (Pkm2) Length = 548 Back     alignment and structure
>pdb|4G1N|A Chain A, Pkm2 In Complex With An Activator Length = 518 Back     alignment and structure
>pdb|1F3W|A Chain A, Recombinant Rabbit Muscle Pyruvate Kinase Length = 530 Back     alignment and structure
>pdb|1PKL|A Chain A, The Structure Of Leishmania Pyruvate Kinase Length = 499 Back     alignment and structure
>pdb|2G50|A Chain A, The Location Of The Allosteric Amino Acid Binding Site Of Muscle Pyruvate Kinase. Length = 530 Back     alignment and structure
>pdb|3PP7|A Chain A, Crystal Structure Of Leishmania Mexicana Pyruvate Kinase In Complex With The Drug Suramin, An Inhibitor Of Glycolysis. Length = 498 Back     alignment and structure
>pdb|3N25|A Chain A, The Structure Of Muscle Pyruvate Kinase In Complex With Proline, Pyruvate, And Mn2+ Length = 531 Back     alignment and structure
>pdb|1AQF|A Chain A, Pyruvate Kinase From Rabbit Muscle With Mg, K, And L- Phospholactate Length = 530 Back     alignment and structure
>pdb|1F3X|A Chain A, S402p Mutant Of Rabbit Muscle Pyruvate Kinase Length = 530 Back     alignment and structure
>pdb|1PKN|A Chain A, Structure Of Rabbit Muscle Pyruvate Kinase Complexed With Mn2+, K+, And Pyruvate Length = 530 Back     alignment and structure
>pdb|3E0V|A Chain A, Crystal Structure Of Pyruvate Kinase From Leishmania Mexicana In Complex With Sulphate Ions Length = 539 Back     alignment and structure
>pdb|1A3W|A Chain A, Pyruvate Kinase From Saccharomyces Cerevisiae Complexed With Fbp, Pg, Mn2+ And K+ Length = 500 Back     alignment and structure
>pdb|3QTG|A Chain A, Crystal Structure Of Pyruvate Kinase From Pyrobaculum Aerophilum Length = 461 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query419
3gg8_A511 Pyruvate kinase; malaria, genomics, proteomics, gl 1e-121
3khd_A520 Pyruvate kinase; malaria, structural genomics, str 1e-120
1e0t_A470 Pyruvate kinase, PK; phosphotransferase, glycolysi 1e-119
3ma8_A534 Pyruvate kinase; parasitology, pyruvate kiase, gly 1e-118
3hqn_D499 Pyruvate kinase, PK; TIM barrel, T-state enzyme, t 1e-114
3gr4_A550 Pyruvate kinase isozymes M1/M2; activator, acetyla 1e-114
1a3w_A500 Pyruvate kinase; allosteric regulation, tranferase 1e-112
3t05_A 606 Pyruvate kinase, PK; tetramer, glycolysis, transfe 1e-111
2e28_A 587 Pyruvate kinase, PK; allosteric, transferase; 2.40 1e-107
3qtg_A461 Pyruvate kinase, PK; TIM barrel, glycolysis, trans 2e-99
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 9e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-04
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A Length = 511 Back     alignment and structure
 Score =  361 bits (929), Expect = e-121
 Identities = 143/377 (37%), Positives = 220/377 (58%), Gaps = 33/377 (8%)

Query: 7   LLEEPIRMASILEP-SKPTFFPAMTKIVGTLGPRSRSVEIISGCLNAGMSVARFDFSWGD 65
           L  + IRM+ ILEP S+  +    T+IV T+GP   +V+ +   ++AGM+V R +FS GD
Sbjct: 14  LYFQGIRMSQILEPRSEEDWTAHRTRIVCTMGPACWNVDTLVKMIDAGMNVCRLNFSHGD 73

Query: 66  TAYHQETLENLKIAIKST-KKLCAVMLDTIGPEL-LVVTKTEHPISLLADESVVLTPDQD 123
              H  T++N++ A+K   +   A++LDT GPE+     K   PI+L    ++ +  D +
Sbjct: 74  HETHARTVQNIQEAMKQRPEARLAILLDTKGPEIRTGFLKDHKPITLQQGATLKIVTDYN 133

Query: 124 KEATSNLLPINFSGLSKAVKKGDTIFI--GQYLFTGNETTSVMLEVTDVDGEDVVCQIKN 181
                  +  ++  L ++VK G+TI I  G          S+ ++V +V  + V+ Q +N
Sbjct: 134 LIGDETTIACSYGALPQSVKPGNTILIADG----------SLSVKVVEVGSDYVITQAQN 183

Query: 182 SAILARQLYTLHVSQ-------IRIDLPTLTDKDKEVISTWGARNNIDFLSLSHTRGAED 234
           +A +          +       +++ LP + +KDK  I  +G     +F++ S  + A+D
Sbjct: 184 TATIG--------ERKNMNLPNVKVQLPVIGEKDKHDILNFGIPMGCNFIAASFVQSADD 235

Query: 235 VRHARDFLSQLGDLGQTQIFAKIENTEGLTHFDEILHEADGIILARGNLGVDLPPEKVFL 294
           VR+ R  L   G     +I  KIEN EGL +FDEIL EADGI++ARG+LG+++PPEKVFL
Sbjct: 236 VRYIRGLLGPRG--RHIRIIPKIENVEGLVNFDEILAEADGIMIARGDLGMEIPPEKVFL 293

Query: 295 FQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRG 353
            QK  + KCN+ GKP +  T++++SM  N RPTRAEA DVANAVLDG+D ++L  ET  G
Sbjct: 294 AQKMMIAKCNVVGKPVITATQMLESMIKNPRPTRAEAADVANAVLDGTDCVMLSGETANG 353

Query: 354 LYPVETISIVGKICAEA 370
            +PV T+  + +IC EA
Sbjct: 354 EFPVITVETMARICYEA 370
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7} Length = 520 Back     alignment and structure
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A Length = 470 Back     alignment and structure
>3ma8_A Pyruvate kinase; parasitology, pyruvate kiase, glycol kinase, magnesium, transferase, structural genomi structural genomics consortium; HET: CIT; 2.64A {Cryptosporidium parvum} Length = 534 Back     alignment and structure
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A* Length = 499 Back     alignment and structure
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 1zjh_A 3g2g_A 1t5a_A* 3bjt_A 3bjf_A* 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* 1aqf_A* 1pkm_A 2g50_A* 1pkn_A 2vgb_A* 2vgf_A* 2vgg_A* ... Length = 550 Back     alignment and structure
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A Length = 500 Back     alignment and structure
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* Length = 606 Back     alignment and structure
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus} Length = 587 Back     alignment and structure
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum} Length = 461 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query419
3khd_A520 Pyruvate kinase; malaria, structural genomics, str 100.0
4drs_A526 Pyruvate kinase; glycolysis, allosteric EN transfe 100.0
3gg8_A511 Pyruvate kinase; malaria, genomics, proteomics, gl 100.0
3hqn_D499 Pyruvate kinase, PK; TIM barrel, T-state enzyme, t 100.0
3gr4_A550 Pyruvate kinase isozymes M1/M2; activator, acetyla 100.0
3t05_A 606 Pyruvate kinase, PK; tetramer, glycolysis, transfe 100.0
1e0t_A470 Pyruvate kinase, PK; phosphotransferase, glycolysi 100.0
2e28_A 587 Pyruvate kinase, PK; allosteric, transferase; 2.40 100.0
3qtg_A461 Pyruvate kinase, PK; TIM barrel, glycolysis, trans 100.0
1a3w_A500 Pyruvate kinase; allosteric regulation, tranferase 100.0
1izc_A339 Macrophomate synthase intermolecular diels-aldera; 99.77
2vws_A267 YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escher 99.74
2v5j_A287 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; l 99.72
1dxe_A256 2-dehydro-3-deoxy-galactarate aldolase; class II a 99.7
3qz6_A261 HPCH/HPAI aldolase; structural genomics, PSI-biolo 99.68
1sgj_A284 Citrate lyase, beta subunit; trimer, TIM barrel, s 99.64
2xz9_A324 Phosphoenolpyruvate-protein kinase (PTS system EI 99.39
3qll_A316 Citrate lyase; beta barrel; 2.45A {Yersinia pestis 99.35
3qqw_A332 Putative citrate lyase; TIM beta/alpha-barrel, str 99.3
1u5h_A273 CITE; TIM barrel, structural genomics, PSI, protei 99.25
3r4i_A339 Citrate lyase; TIM beta/alpha-barrel, structural g 99.21
2hwg_A575 Phosphoenolpyruvate-protein phosphotransferase; en 99.14
2ols_A794 Phosphoenolpyruvate synthase; MC structural genomi 99.14
3oyz_A 433 Malate synthase; TIM barrel, transferase; HET: ACO 99.06
2wqd_A572 Phosphoenolpyruvate-protein phosphotransferase; ki 99.01
1vbg_A876 Pyruvate,orthophosphate dikinase; transferase, mai 98.5
1kbl_A873 PPDK, pyruvate phosphate dikinase; transferase, ph 98.41
3cuz_A532 MSA, malate synthase A; TIM barrel, cytoplasm, gly 98.32
3cux_A528 Malate synthase; TIM barrel, glyoxylate bypass, tr 98.15
1p7t_A 731 MSG, malate synthase G; TIM barrel, glyoxylate cyc 98.09
1h6z_A913 Pyruvate phosphate dikinase; transferase, tropical 97.68
2x0s_A913 Pyruvate phosphate dikinase; transferase, tropical 96.92
1jqo_A 970 Phosphoenolpyruvate carboxylase; beta barrel, carb 95.73
3odm_A 560 Pepcase, PEPC, phosphoenolpyruvate carboxylase; be 95.71
4af0_A556 Inosine-5'-monophosphate dehydrogenase; oxidoreduc 95.5
3f4w_A211 Putative hexulose 6 phosphate synthase; humps, mal 95.21
1jqn_A 883 Pepcase, PEPC, phosphoenolpyruvate carboxylase; be 95.08
4fo4_A366 Inosine 5'-monophosphate dehydrogenase; structural 94.08
3ovp_A228 Ribulose-phosphate 3-epimerase; iron binding, isom 93.45
4g9p_A406 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; 93.33
1h1y_A228 D-ribulose-5-phosphate 3-epimerase; oxidative pent 93.31
3usb_A511 Inosine-5'-monophosphate dehydrogenase; structural 92.81
4fxs_A496 Inosine-5'-monophosphate dehydrogenase; structural 92.75
3ffs_A400 Inosine-5-monophosphate dehydrogenase; beta-alpha 91.94
3khj_A361 Inosine-5-monophosphate dehydrogenase; enzyme-inhi 91.91
1tqj_A230 Ribulose-phosphate 3-epimerase; beta-alpha barrel 91.9
3inp_A246 D-ribulose-phosphate 3-epimerase; IDP02542, isomer 91.69
4avf_A490 Inosine-5'-monophosphate dehydrogenase; oxidoreduc 91.56
3ble_A337 Citramalate synthase from leptospira interrogans; 91.51
3qja_A272 IGPS, indole-3-glycerol phosphate synthase; struct 91.09
1ydn_A295 Hydroxymethylglutaryl-COA lyase; TIM-barrel protei 90.42
3ctl_A231 D-allulose-6-phosphate 3-epimerase; D-glucitol 6-p 90.4
3igs_A232 N-acetylmannosamine-6-phosphate 2-epimerase 2; ene 90.25
1vhc_A224 Putative KHG/KDPG aldolase; structural genomics, u 89.98
2fli_A220 Ribulose-phosphate 3-epimerase; (beta/alpha)8-barr 89.85
2z6i_A332 Trans-2-enoyl-ACP reductase II; fatty acid synthes 89.47
3eeg_A325 2-isopropylmalate synthase; 11106D, beta barrel, P 89.44
1jcn_A514 Inosine monophosphate dehydrogenase I; IMPD, IMPDH 89.32
3ajx_A207 3-hexulose-6-phosphate synthase; HPS, OMPDC supraf 89.05
3nav_A271 Tryptophan synthase alpha chain; alpha subunit, st 88.77
3r2g_A361 Inosine 5'-monophosphate dehydrogenase; structural 88.7
1w8s_A263 FBP aldolase, fructose-bisphosphate aldolase class 88.59
3vnd_A267 TSA, tryptophan synthase alpha chain; psychrophili 88.5
1gte_A 1025 Dihydropyrimidine dehydrogenase; electron transfer 88.5
1wbh_A214 KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} 88.27
1mxs_A225 KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate a 88.05
1y0e_A223 Putative N-acetylmannosamine-6-phosphate 2-epimer; 88.02
2cw6_A298 Hydroxymethylglutaryl-COA lyase, mitochondrial; HM 87.78
1ydo_A307 HMG-COA lyase; TIM-barrel protein, structural geno 87.67
2yw3_A207 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deox 87.64
3jr2_A218 Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulon 87.63
1tqx_A227 D-ribulose-5-phosphate 3-epimerase, putative; stru 87.59
3rmj_A 370 2-isopropylmalate synthase; LEUA, truncation, neis 87.28
2qjg_A273 Putative aldolase MJ0400; beta-alpha barrel, lyase 87.0
1yad_A221 Regulatory protein TENI; TIM barrel, transcription 86.84
3bo9_A326 Putative nitroalkan dioxygenase; TM0800, structura 86.67
3bw2_A369 2-nitropropane dioxygenase; TIM barrel, oxidoreduc 86.56
1zco_A262 2-dehydro-3-deoxyphosphoheptonate aldolase; arabin 86.46
1at0_A145 17-hedgehog; developmental signaling molecule, cho 86.41
1vrd_A494 Inosine-5'-monophosphate dehydrogenase; TM1347, st 86.37
3cu2_A237 Ribulose-5-phosphate 3-epimerase; YP_718263.1, rib 86.36
2c6q_A351 GMP reductase 2; TIM barrel, metal-binding, NADP, 86.29
2gjl_A328 Hypothetical protein PA1024; 2-nitropropane dioxyg 86.1
2ftp_A302 Hydroxymethylglutaryl-COA lyase; structural genomi 85.49
4e38_A232 Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho 84.72
3q58_A229 N-acetylmannosamine-6-phosphate 2-epimerase; TIM b 84.27
1geq_A248 Tryptophan synthase alpha-subunit; hyperthermophIl 84.26
1eep_A404 Inosine 5'-monophosphate dehydrogenase; alpha-beta 83.5
4fxs_A496 Inosine-5'-monophosphate dehydrogenase; structural 83.03
3nvt_A385 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; 82.8
1wa3_A205 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, 82.5
1rpx_A230 Protein (ribulose-phosphate 3-epimerase); chloropl 82.49
1n7k_A234 Deoxyribose-phosphate aldolase; A.pernix, tetramer 82.25
1f76_A336 Dihydroorotate dehydrogenase; monomer, alpha-beta- 82.15
1p1x_A260 Deoxyribose-phosphate aldolase; alpha-beta barrel, 81.82
1q6o_A216 Humps, 3-keto-L-gulonate 6-phosphate decarboxylase 81.76
1ypf_A336 GMP reductase; GUAC, purines, pyrimidines, nucleos 81.61
2h6r_A219 Triosephosphate isomerase; beta-alpha barrel; 2.30 81.06
2ekc_A262 AQ_1548, tryptophan synthase alpha chain; structur 81.03
1qop_A268 Tryptophan synthase alpha chain; lyase, carbon-oxy 80.8
3tha_A252 Tryptophan synthase alpha chain; structural genomi 80.75
3qja_A272 IGPS, indole-3-glycerol phosphate synthase; struct 80.42
1ka9_F252 Imidazole glycerol phosphtate synthase; riken stru 80.39
3tsm_A272 IGPS, indole-3-glycerol phosphate synthase; struct 80.13
1jub_A311 Dihydroorotate dehydrogenase A; homodimer, alpha-b 80.04
3ewb_X293 2-isopropylmalate synthase; LEUA, structural genom 80.02
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7} Back     alignment and structure
Probab=100.00  E-value=8.9e-119  Score=933.38  Aligned_cols=400  Identities=36%  Similarity=0.616  Sum_probs=370.4

Q ss_pred             ccccccccccccccCCCCCCCCCCCeEEEEecCCCCCCHHHHHHHHHcCCCEEEEeccCCCHHHHHHHHHHHHHHHH-hc
Q 014746            5 NLLLEEPIRMASILEPSKPTFFPAMTKIVGTLGPRSRSVEIISGCLNAGMSVARFDFSWGDTAYHQETLENLKIAIK-ST   83 (419)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~tkIi~TiGp~~~~~~~i~~li~~Gm~v~RiN~SHg~~e~~~~~i~~ir~a~~-~~   83 (419)
                      ||++++ ++|+++|+|..|..++|||||||||||+|+++|+|++|+++||||||||||||++|+|+++++++|++++ ++
T Consensus        24 ~~~~~~-~~~~~i~~~~~~~~~~rkTKIV~TiGPas~s~e~l~~Li~aGmnv~RlNfSHG~~e~h~~~i~~iR~~~~~~~  102 (520)
T 3khd_A           24 MQSAAN-ITLRQILEPNNVNLRSKKTHIVCTLGPACKSVETLVKLIDAGMDICRFNFSHGSHEDHKEMFNNVLKAQELRP  102 (520)
T ss_dssp             HHHHHT-CCHHHHSCCC-CCGGGCSSEEEEECCGGGCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHCS
T ss_pred             ccccCC-cCHHHhcCCCCCcccCCCcEEEEeeCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHhc
Confidence            566666 9999999998888899999999999999999999999999999999999999999999999999999999 89


Q ss_pred             CCceEEEEecCCCeEEEeecCCCcEEeeCCCEEEEeeCCCCCCCcCeEeccCcccchhcCCCCEEEeeccccCCceEEEE
Q 014746           84 KKLCAVMLDTIGPELLVVTKTEHPISLLADESVVLTPDQDKEATSNLLPINFSGLSKAVKKGDTIFIGQYLFTGNETTSV  163 (419)
Q Consensus        84 ~~~i~Il~Dl~GPkIR~~~~~~~~i~l~~G~~v~lt~~~~~~~~~~~i~v~~~~l~~~v~~Gd~I~id~~~~DG~i~l~V  163 (419)
                      |+||+||+|||||||||+.+.++++.|++||+|+|+++....|+.+.++++|++|+++|++||+||+|    ||+|.|+|
T Consensus       103 ~~~vaIllDl~GPkIR~G~~~~~~~~L~~G~~~~lt~~~~~~g~~~~i~v~y~~l~~~v~~G~~Ilid----DG~i~l~V  178 (520)
T 3khd_A          103 NCLLGMLLDTKGPEIRTGFLKNKEVHLKEGSKLKLVTDYEFLGDETCIACSYKKLPQSVKPGNIILIA----DGSVSCKV  178 (520)
T ss_dssp             SCCCEEEEECCCCCEEBCEEC-----------CEEESCTTCEECTTEEEBSCTTHHHHCCC-CEEEET----TTTEEEEE
T ss_pred             CCceEEEEeCCCCeEEeeccCCCCeEecCCCEEEEecCCCcCCCccEEecccHHHHhhcCcCcEEEEe----CCEEEEEE
Confidence            99999999999999999877666679999999999998656788999999999999999999999999    99999999


Q ss_pred             EEEEEeecCCeEEEEEEeCcEEecCCcceeecCceecCCCCCccCHHHH-HHHhhhcCCcEEEEecCCCHHHHHHHHHHH
Q 014746          164 MLEVTDVDGEDVVCQIKNSAILARQLYTLHVSQIRIDLPTLTDKDKEVI-STWGARNNIDFLSLSHTRGAEDVRHARDFL  242 (419)
Q Consensus       164 ~l~v~~v~~~~i~~~v~~gG~l~~~~Kgvnlp~~~~~lp~lte~D~~di-~~~~l~~g~d~I~lsfV~saedv~~v~~~l  242 (419)
                          .+++++.+.|+|.+||.| +++||||+||+.+++|+||+||++|| . |++++|+|||++|||++++||.++|++|
T Consensus       179 ----~~~~~~~v~~~V~~gG~L-~~~KgvNlPg~~~~lp~lTekD~~dl~~-f~~~~~vD~Ia~SFVr~a~Dv~~~r~~l  252 (520)
T 3khd_A          179 ----LETHEDHVITEVLNSAVI-GERKNMNLPNVKVDLPIISEKDKNDILN-FAIPMGCNFIAASFIQSADDVRLIRNLL  252 (520)
T ss_dssp             ----EEECSSCEEEEECC-CCC-CSSCEEECTTSCCCSCSSCHHHHHHHHH-THHHHTCCEEEETTCCSHHHHHHHHHHH
T ss_pred             ----EEEECCEEEEEEEeCeEE-eCCceeecCCCcCCCCCCCHHHHHHHHH-HHHHcCCCEEEECCCCCHHHHHHHHHHH
Confidence                566889999999999999 99999999999999999999999999 7 9999999999999999999999999999


Q ss_pred             HhcCCCCCceEEEEecCHHhHhhHHHHHhhCcEEEEeCCCccCCCCchhHHHHHHHHHHHHHHcCCcEEE-Ecccccccc
Q 014746          243 SQLGDLGQTQIFAKIENTEGLTHFDEILHEADGIILARGNLGVDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTD  321 (419)
Q Consensus       243 ~~~~~~~~~~IiaKIEt~~gv~nl~eI~~~sDgImIargDLg~elg~e~v~~~qk~Ii~a~~~~gkpvi~-TqmLeSM~~  321 (419)
                      .+.+  .++.|||||||++||+|++||++++|||||||||||+|+|++++|.+||+|+++|+++|||||+ |||||||++
T Consensus       253 ~~~g--~~i~IIAKIE~~eav~nldeIl~~sDGIMVARGDLgvEi~~e~vp~~Qk~iI~~c~~aGKPVi~ATQMLeSMi~  330 (520)
T 3khd_A          253 GPRG--RHIKIIPKIENIEGIIHFDKILAESDGIMIARGDLGMEISPEKVFLAQKLMISKCNLQGKPIITATQMLESMTK  330 (520)
T ss_dssp             TTTT--TTSEEEEEECSHHHHHTHHHHHHHSSCEEECHHHHTTTSCGGGHHHHHHHHHHHHHHHTCCEEECCCCCGGGGT
T ss_pred             HhcC--CCCcEEEEECCHHHHHhHHHHHHhCCcEEEccccccccCCHHHHHHHHHHHHHHHHHcCCCeEEeehhhHHHhc
Confidence            9888  7899999999999999999999999999999999999999999999999999999999999999 999999999


Q ss_pred             CCCcchhhHhHHHHHHHcCCceEEecccccCCCCHHHHHHHHHHHHHHHhc-----------------------------
Q 014746          322 NLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAKT-----------------------------  372 (419)
Q Consensus       322 ~~~PtraEv~Dv~nav~~G~D~vmLs~ETa~G~yP~eaV~~~~~I~~~aE~-----------------------------  372 (419)
                      ||+|||||++||+|||+||+||+|||+|||.|+||+|||++|++||+++|+                             
T Consensus       331 ~p~PTRAEvsDVanAVldGaDavMLSgETA~G~yPveaV~~M~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa  410 (520)
T 3khd_A          331 NPRPTRAEVTDVANAVLDGTDCVMLSGETAGGKFPVEAVTIMSKICLEAEACIDYKLLYQSLVNAIETPISVQEAVARSA  410 (520)
T ss_dssp             CSSCCHHHHHHHHHHHHHTCSEEEESHHHHSCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHSCSCCCHHHHHHHHH
T ss_pred             CCCccHHHHHHHHHHHHhCCCEEEecccccCCcCHHHHHHHHHHHHHHHHhhhhhhhhHhhhhhccCCCCCHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999995                             


Q ss_pred             -----------------------------------------------------------CCcChHHHHHHHHHHHHHCCC
Q 014746          373 -----------------------------------------------------------TNATSESALKVALDYGKAHGV  393 (419)
Q Consensus       373 -----------------------------------------------------------~~~~~~~~~~~a~~~~~~~~~  393 (419)
                                                                                 ...+.|.+++.|+++++++|+
T Consensus       411 ~~~A~~l~a~aIv~~T~SG~TA~~vSr~RP~~PIia~T~~~~~~r~l~L~~GV~p~~~~~~~~~d~~~~~a~~~~~~~g~  490 (520)
T 3khd_A          411 VETAESIQASLIIALTETGYTARLIAKYKPSCTILALSASDSTVKCLNVHRGVTCIKVGSFQGTDIVIRNAIEIAKQRNM  490 (520)
T ss_dssp             HHHHHHTTCSEEEEECSSSHHHHHHHHTCCSSEEEEEESCHHHHHHGGGSTTEEEEECCSCCCHHHHHHHHHHHHHHTTS
T ss_pred             HHHHHhcCCCEEEEECCCcHHHHHHHhcCCCCCEEEEcCCHHHHHHHhccCCeEEEEeCCCCCHHHHHHHHHHHHHHCCC
Confidence                                                                       114689999999999999999


Q ss_pred             CCCCCEEEEEeec-----CCccEEEEEEc
Q 014746          394 IKSHDRVVICQKV-----GDSAVVKIMEL  417 (419)
Q Consensus       394 ~~~gd~vv~~~g~-----g~tn~~~i~~~  417 (419)
                      +++||.||+++|+     |+||++||++|
T Consensus       491 ~~~GD~vVv~~G~~~g~~G~TN~lrv~~v  519 (520)
T 3khd_A          491 AKVGDSVIAIHGIKEEVSGGTNLMKVVQI  519 (520)
T ss_dssp             SCTTCEEEEEEC-CCSSTTCEEEEEEEEC
T ss_pred             CCCcCEEEEEeCccCCCCCCCeEEEEEEe
Confidence            9999999999999     79999999987
>4drs_A Pyruvate kinase; glycolysis, allosteric EN transferase; 2.50A {Cryptosporidium parvum} PDB: 3ma8_A* Back     alignment and structure
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A Back     alignment and structure
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3srk_A* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A* Back     alignment and structure
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 3srh_A 3srd_A 1zjh_A 4b2d_A* 4b2d_D* 3u2z_A* 3g2g_A 1t5a_A* 3bjt_A 4g1n_A* 3bjf_A* 3srf_C 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* ... Back     alignment and structure
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A* Back     alignment and structure
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A Back     alignment and structure
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus} Back     alignment and structure
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum} Back     alignment and structure
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A Back     alignment and structure
>1izc_A Macrophomate synthase intermolecular diels-aldera; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5 Back     alignment and structure
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A Back     alignment and structure
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A Back     alignment and structure
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A Back     alignment and structure
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0 Back     alignment and structure
>1sgj_A Citrate lyase, beta subunit; trimer, TIM barrel, structural genomics, PSI, protein structure initiative; 1.84A {Deinococcus radiodurans} SCOP: c.1.12.5 Back     alignment and structure
>2xz9_A Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); thermophilic, PEP-utilising enzyme, transferase; 1.68A {Thermoanaerobacter tengcongensis} PDB: 2bg5_A 2xz7_A* Back     alignment and structure
>3qll_A Citrate lyase; beta barrel; 2.45A {Yersinia pestis} Back     alignment and structure
>3qqw_A Putative citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 2.44A {Ralstonia eutropha} Back     alignment and structure
>1u5h_A CITE; TIM barrel, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC, lyase; 1.65A {Mycobacterium tuberculosis} SCOP: c.1.12.5 PDB: 1u5v_A* 1z6k_A Back     alignment and structure
>3r4i_A Citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.24A {Burkholderia xenovorans} Back     alignment and structure
>2hwg_A Phosphoenolpyruvate-protein phosphotransferase; enzyme I, phosphoenolpyruvate:sugar phosphotransferase system, PTS; HET: NEP; 2.70A {Escherichia coli} PDB: 2kx9_A 2xdf_A 2l5h_A Back     alignment and structure
>2ols_A Phosphoenolpyruvate synthase; MC structural genomics, PSI-2, protein structure initiative, M center for structural genomics, transferase; 2.40A {Neisseria meningitidis} Back     alignment and structure
>3oyz_A Malate synthase; TIM barrel, transferase; HET: ACO; 1.95A {Haloferax volcanii} PDB: 3oyx_A* 3pug_A Back     alignment and structure
>2wqd_A Phosphoenolpyruvate-protein phosphotransferase; kinase, cytoplasm, transport, magnesium, PEP- utilising enzyme, phosphotransferase system; 2.40A {Staphylococcus aureus} PDB: 2hro_A Back     alignment and structure
>1vbg_A Pyruvate,orthophosphate dikinase; transferase, maize, riken structural genomics/proteomics INI RSGI, structural genomics; 2.30A {Zea mays} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1vbh_A* Back     alignment and structure
>1kbl_A PPDK, pyruvate phosphate dikinase; transferase, phosphotransferase; 1.94A {Clostridium symbiosum} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1kc7_A* 1dik_A 1ggo_A 1jde_A 2dik_A 2r82_A 2fm4_A Back     alignment and structure
>3cuz_A MSA, malate synthase A; TIM barrel, cytoplasm, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.04A {Escherichia coli} PDB: 3cv1_A 3cv2_A* Back     alignment and structure
>3cux_A Malate synthase; TIM barrel, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.70A {Bacillus anthracis} Back     alignment and structure
>1p7t_A MSG, malate synthase G; TIM barrel, glyoxylate cycle, acetyl-COA, cysteine-sulfenic lyase; HET: ACO PG4; 1.95A {Escherichia coli str} SCOP: c.1.13.1 PDB: 1y8b_A 1d8c_A* 2jqx_A Back     alignment and structure
>1h6z_A Pyruvate phosphate dikinase; transferase, tropical parasite, trypanosome; 3.00A {Trypanosoma brucei} PDB: 2x0s_A Back     alignment and structure
>2x0s_A Pyruvate phosphate dikinase; transferase, tropical parasite; 3.00A {Trypanosoma brucei} Back     alignment and structure
>1jqo_A Phosphoenolpyruvate carboxylase; beta barrel, carbon dioxide fixation, lyase; 3.00A {Zea mays} SCOP: c.1.12.3 Back     alignment and structure
>3odm_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta-barrel, lyase; 2.95A {Clostridium perfringens} Back     alignment and structure
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B* Back     alignment and structure
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0 Back     alignment and structure
>1jqn_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta barrel, Mn2+ and DCDP complex, lyase; HET: DCO; 2.35A {Escherichia coli} SCOP: c.1.12.3 PDB: 1fiy_A* 1qb4_A Back     alignment and structure
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A Back     alignment and structure
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A Back     alignment and structure
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A* Back     alignment and structure
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A Back     alignment and structure
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A* Back     alignment and structure
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor} Back     alignment and structure
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum} Back     alignment and structure
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum} Back     alignment and structure
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2 Back     alignment and structure
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp} Back     alignment and structure
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa} Back     alignment and structure
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A* Back     alignment and structure
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A* Back     alignment and structure
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis} Back     alignment and structure
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A* Back     alignment and structure
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0 Back     alignment and structure
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1 Back     alignment and structure
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2 Back     alignment and structure
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A* Back     alignment and structure
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406} Back     alignment and structure
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A* Back     alignment and structure
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri} Back     alignment and structure
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4 Back     alignment and structure
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp} Back     alignment and structure
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A Back     alignment and structure
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina} Back     alignment and structure
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A* Back     alignment and structure
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A* Back     alignment and structure
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1 Back     alignment and structure
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5 Back     alignment and structure
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A* Back     alignment and structure
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp} Back     alignment and structure
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A Back     alignment and structure
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A* Back     alignment and structure
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2 Back     alignment and structure
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis} Back     alignment and structure
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A Back     alignment and structure
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A* Back     alignment and structure
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8} Back     alignment and structure
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A* Back     alignment and structure
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus} Back     alignment and structure
>1at0_A 17-hedgehog; developmental signaling molecule, cholesterol transfer, signaling protein; 1.90A {Drosophila melanogaster} SCOP: b.86.1.1 Back     alignment and structure
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1 Back     alignment and structure
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus} Back     alignment and structure
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A* Back     alignment and structure
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A* Back     alignment and structure
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa} Back     alignment and structure
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3} Back     alignment and structure
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp} Back     alignment and structure
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A Back     alignment and structure
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1 Back     alignment and structure
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor} Back     alignment and structure
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A* Back     alignment and structure
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A Back     alignment and structure
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2 Back     alignment and structure
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1 Back     alignment and structure
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1 Back     alignment and structure
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A Back     alignment and structure
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A* Back     alignment and structure
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A* Back     alignment and structure
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii} Back     alignment and structure
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus} Back     alignment and structure
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ... Back     alignment and structure
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni} Back     alignment and structure
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A* Back     alignment and structure
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1 Back     alignment and structure
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0 Back     alignment and structure
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A* Back     alignment and structure
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 419
d1pkla2258 c.1.12.1 (A:1-87,A:187-357) Pyruvate kinase, N-ter 8e-45
d1pkla2258 c.1.12.1 (A:1-87,A:187-357) Pyruvate kinase, N-ter 1e-15
d1e0ta2246 c.1.12.1 (A:1-69,A:168-344) Pyruvate kinase, N-ter 5e-42
d1e0ta2246 c.1.12.1 (A:1-69,A:168-344) Pyruvate kinase, N-ter 2e-16
d2g50a2282 c.1.12.1 (A:12-115,A:218-395) Pyruvate kinase, N-t 1e-40
d2g50a2282 c.1.12.1 (A:12-115,A:218-395) Pyruvate kinase, N-t 3e-15
d1a3xa2265 c.1.12.1 (A:1-87,A:189-366) Pyruvate kinase, N-ter 1e-39
d1a3xa2265 c.1.12.1 (A:1-87,A:189-366) Pyruvate kinase, N-ter 7e-16
d2g50a1102 b.58.1.1 (A:116-217) Pyruvate kinase (PK) {Rabbit 2e-05
d1a3xa1101 b.58.1.1 (A:88-188) Pyruvate kinase (PK) {Baker's 3e-05
>d1pkla2 c.1.12.1 (A:1-87,A:187-357) Pyruvate kinase, N-terminal domain {Leishmania mexicana [TaxId: 5665]} Length = 258 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Phosphoenolpyruvate/pyruvate domain
family: Pyruvate kinase
domain: Pyruvate kinase, N-terminal domain
species: Leishmania mexicana [TaxId: 5665]

 Score =  154 bits (390), Expect = 8e-45
 Identities = 74/192 (38%), Positives = 111/192 (57%), Gaps = 7/192 (3%)

Query: 180 KNSAILARQLYTLHVSQIRIDLPTLTDKDKEVISTWGARNNIDFLSLSHTRGAEDVRHAR 239
           + +A L   +     ++    +      D +    +G    +D +  S  R AE V   R
Sbjct: 69  QAAAELGVNIAIALDTKGPPAVSAKDRVDLQ----FGVEQGVDMIFASFIRSAEQVGDVR 124

Query: 240 DFLSQLGDLGQTQIFAKIENTEGLTHFDEILHEADGIILARGNLGVDLPPEKVFLFQKAA 299
             L   G      I  KIEN +G+ + D I+ E+DGI++ARG+LGV++P EKV + QK  
Sbjct: 125 KALGPKGR--DIMIICKIENHQGVQNIDSIIEESDGIMVARGDLGVEIPAEKVVVAQKIL 182

Query: 300 LYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVE 358
           + KCN+AGKP +  T++++SMT N RPTRAE +DVANAV +G+D ++L  ET +G YP E
Sbjct: 183 ISKCNVAGKPVICATQMLESMTYNPRPTRAEVSDVANAVFNGADCVMLSGETAKGKYPNE 242

Query: 359 TISIVGKICAEA 370
            +  + +IC EA
Sbjct: 243 VVQYMARICLEA 254
>d1pkla2 c.1.12.1 (A:1-87,A:187-357) Pyruvate kinase, N-terminal domain {Leishmania mexicana [TaxId: 5665]} Length = 258 Back     information, alignment and structure
>d1e0ta2 c.1.12.1 (A:1-69,A:168-344) Pyruvate kinase, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 246 Back     information, alignment and structure
>d1e0ta2 c.1.12.1 (A:1-69,A:168-344) Pyruvate kinase, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 246 Back     information, alignment and structure
>d2g50a2 c.1.12.1 (A:12-115,A:218-395) Pyruvate kinase, N-terminal domain {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 282 Back     information, alignment and structure
>d2g50a2 c.1.12.1 (A:12-115,A:218-395) Pyruvate kinase, N-terminal domain {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 282 Back     information, alignment and structure
>d1a3xa2 c.1.12.1 (A:1-87,A:189-366) Pyruvate kinase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 265 Back     information, alignment and structure
>d1a3xa2 c.1.12.1 (A:1-87,A:189-366) Pyruvate kinase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 265 Back     information, alignment and structure
>d2g50a1 b.58.1.1 (A:116-217) Pyruvate kinase (PK) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 102 Back     information, alignment and structure
>d1a3xa1 b.58.1.1 (A:88-188) Pyruvate kinase (PK) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 101 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query419
d1e0ta2246 Pyruvate kinase, N-terminal domain {Escherichia co 100.0
d1pkla2258 Pyruvate kinase, N-terminal domain {Leishmania mex 100.0
d1a3xa2265 Pyruvate kinase, N-terminal domain {Baker's yeast 100.0
d2g50a2282 Pyruvate kinase, N-terminal domain {Rabbit (Orycto 100.0
d1e0ta198 Pyruvate kinase (PK) {Escherichia coli [TaxId: 562 99.87
d2g50a1102 Pyruvate kinase (PK) {Rabbit (Oryctolagus cuniculu 99.85
d2vgba1102 Pyruvate kinase (PK) {Human (Homo sapiens) [TaxId: 99.85
d1a3xa1101 Pyruvate kinase (PK) {Baker's yeast (Saccharomyces 99.85
d1pkla199 Pyruvate kinase (PK) {Leishmania mexicana [TaxId: 99.85
d1dxea_253 2-dehydro-3-deoxy-galactarate aldolase {Escherichi 99.7
d1izca_299 Macrophomate synthase {Macrophoma commelinae [TaxI 99.62
d1sgja_231 Citrate lyase, beta subunit {Deinococcus radiodura 99.04
d1u5ha_223 Citrate lyase, beta subunit {Mycobacterium tubercu 98.9
d2g50a3135 Pyruvate kinase, C-terminal domain {Rabbit (Orycto 98.07
d1e0ta3117 Pyruvate kinase, C-terminal domain {Escherichia co 98.07
d1pkla3141 Pyruvate kinase, C-terminal domain {Leishmania mex 97.97
d2vgba3134 Pyruvate kinase, C-terminal domain {Human (Homo sa 97.96
d1kbla1364 Pyruvate phosphate dikinase, C-terminal domain {Cl 97.85
d1a3xa3134 Pyruvate kinase, C-terminal domain {Baker's yeast 97.75
d1vbga1356 Pyruvate phosphate dikinase, C-terminal domain {Ma 97.65
d1h6za1366 Pyruvate phosphate dikinase, C-terminal domain {Tr 97.22
d1zfja1365 Inosine monophosphate dehydrogenase (IMPDH) {Strep 94.56
d1vrda1330 Inosine monophosphate dehydrogenase (IMPDH) {Therm 94.33
d1jr1a1378 Inosine monophosphate dehydrogenase (IMPDH) {Chine 93.74
d1jqoa_ 936 Phosphoenolpyruvate carboxylase {Escherichia coli 93.43
d1y0ea_222 Putative N-acetylmannosamine-6-phosphate 2-epimera 93.33
d1jqna_ 880 Phosphoenolpyruvate carboxylase {Escherichia coli 93.01
d1eepa_388 Inosine monophosphate dehydrogenase (IMPDH) {Lyme 92.36
d2cu0a1368 Inosine monophosphate dehydrogenase (IMPDH) {Pyroc 91.59
d1qopa_267 Trp synthase alpha-subunit {Salmonella typhimurium 90.27
d1gtea2312 Dihydropyrimidine dehydrogenase, domain 4 {Pig (Su 86.82
d1n7ka_234 Deoxyribose-phosphate aldolase DeoC {Archaeon Aero 86.72
d1tqja_221 D-ribulose-5-phosphate 3-epimerase {Synechocystis 86.14
d2flia1217 D-ribulose-5-phosphate 3-epimerase {Streptococcus 85.46
d1geqa_248 Trp synthase alpha-subunit {Archaeon Pyrococcus fu 83.76
d1rpxa_230 D-ribulose-5-phosphate 3-epimerase {Potato (Solanu 82.98
d1pvna1362 Inosine monophosphate dehydrogenase (IMPDH) {Tritr 81.21
d1q6oa_213 3-keto-L-gulonate 6-phosphate decarboxylase {Esche 80.91
d2tpsa_226 Thiamin phosphate synthase {Bacillus subtilis [Tax 80.65
d1yxya1230 Putative N-acetylmannosamine-6-phosphate 2-epimera 80.43
>d1e0ta2 c.1.12.1 (A:1-69,A:168-344) Pyruvate kinase, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Phosphoenolpyruvate/pyruvate domain
family: Pyruvate kinase
domain: Pyruvate kinase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.1e-79  Score=587.70  Aligned_cols=239  Identities=45%  Similarity=0.732  Sum_probs=216.7

Q ss_pred             CCCeEEEEecCCCCCCHHHHHHHHHcCCCEEEEeccCCCHHHHHHHHHHHHHHHHhcCCceEEEEecCCCeEEEeecCCC
Q 014746           27 PAMTKIVGTLGPRSRSVEIISGCLNAGMSVARFDFSWGDTAYHQETLENLKIAIKSTKKLCAVMLDTIGPELLVVTKTEH  106 (419)
Q Consensus        27 ~~~tkIi~TiGp~~~~~~~i~~li~~Gm~v~RiN~SHg~~e~~~~~i~~ir~a~~~~~~~i~Il~Dl~GPkIR~~~~~~~  106 (419)
                      +|||||||||||+|++++.|++|+++||||||||||||++++|+++++++|++++++|++++|++||+||+         
T Consensus         1 mrkTKIIaTiGPas~~~~~l~~li~aGvdv~RlN~SHg~~~~~~~~i~~ir~~~~~~~~~~~I~~Dl~gp~---------   71 (246)
T d1e0ta2           1 MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKTAAILLDTKGPA---------   71 (246)
T ss_dssp             CCCSEEEEECCGGGCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHHTCCCEEEEECCCCS---------
T ss_pred             CCCCeEEEeeCCCcCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHcCCCCcccccccccc---------
Confidence            68999999999999999999999999999999999999999999999999999999999999999998863         


Q ss_pred             cEEeeCCCEEEEeeCCCCCCCcCeEeccCcccchhcCCCCEEEeeccccCCceEEEEEEEEEeecCCeEEEEEEeCcEEe
Q 014746          107 PISLLADESVVLTPDQDKEATSNLLPINFSGLSKAVKKGDTIFIGQYLFTGNETTSVMLEVTDVDGEDVVCQIKNSAILA  186 (419)
Q Consensus       107 ~i~l~~G~~v~lt~~~~~~~~~~~i~v~~~~l~~~v~~Gd~I~id~~~~DG~i~l~V~l~v~~v~~~~i~~~v~~gG~l~  186 (419)
                                                                                                      
T Consensus        72 --------------------------------------------------------------------------------   71 (246)
T d1e0ta2          72 --------------------------------------------------------------------------------   71 (246)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cCCcceeecCceecCCCCCccCHHHHHHHhhhcCCcEEEEecCCCHHHHHHHHHHHHhcCCCCCceEEEEecCHHhHhhH
Q 014746          187 RQLYTLHVSQIRIDLPTLTDKDKEVISTWGARNNIDFLSLSHTRGAEDVRHARDFLSQLGDLGQTQIFAKIENTEGLTHF  266 (419)
Q Consensus       187 ~~~Kgvnlp~~~~~lp~lte~D~~di~~~~l~~g~d~I~lsfV~saedv~~v~~~l~~~~~~~~~~IiaKIEt~~gv~nl  266 (419)
                                       +|++|.+++. |++++|+|||++|||++++|+.++|+++.+.+. .+++|||||||++|++|+
T Consensus        72 -----------------ltekD~~~i~-~a~~~~vD~ialSFVr~~~Dv~~~r~~l~~~~~-~~~~iiaKIE~~~al~nl  132 (246)
T d1e0ta2          72 -----------------LAEKDKQDLI-FGCEQGVDFVAASFIRKRSDVIEIREHLKAHGG-ENIHIISKIENQEGLNNF  132 (246)
T ss_dssp             -----------------SCHHHHHHHH-HHHHHTCSEEEESSCCSHHHHHHHHHHHHTTTC-TTCEEEEEECSHHHHHTH
T ss_pred             -----------------cccCcchhhh-HHHHcCCCEEEEcCCCCHHHHHHHHHHHHHhCC-CCceEEEEecchhhhhch
Confidence                             4899999996 999999999999999999999999999987652 578999999999999999


Q ss_pred             HHHHhhCcEEEEeCCCccCCCCchhHHHHHHHHHHHHHHcCCcEEE-EccccccccCCCcchhhHhHHHHHHHcCCceEE
Q 014746          267 DEILHEADGIILARGNLGVDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAIL  345 (419)
Q Consensus       267 ~eI~~~sDgImIargDLg~elg~e~v~~~qk~Ii~a~~~~gkpvi~-TqmLeSM~~~~~PtraEv~Dv~nav~~G~D~vm  345 (419)
                      ++|+++||||||+|||||+|+|++++|.+|++|++.|+++|||||+ |||||||+++|.|||||++||+|||.+|+||+|
T Consensus       133 deIi~~sDgImIaRGDLg~ei~~e~vp~~Qk~ii~~~~~~~kpvi~ATq~LeSM~~~p~PTRAEv~Dv~nav~dG~D~vm  212 (246)
T d1e0ta2         133 DEILEASDGIMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATMMLDSMIKNPRPTDAEAGDVANAILDGTDAVM  212 (246)
T ss_dssp             HHHHHHSSEEEEEHHHHHHHSCHHHHHHHHHHHHHHHHHHTCEEEEECC---------CCCHHHHHHHHHHHHHTCSEEE
T ss_pred             HHHHhhcceEEEEccchhhhCCHHHHHHHHHHHHHHHHHhCCCEEEehhhhhhhhcCCCCchHHHHHHHHHHHhCCcEEE
Confidence            9999999999999999999999999999999999999999999999 999999999999999999999999999999999


Q ss_pred             ecccccCCCCHHHHHHHHHHHHHHHhcC
Q 014746          346 LGAETLRGLYPVETISIVGKICAEAKTT  373 (419)
Q Consensus       346 Ls~ETa~G~yP~eaV~~~~~I~~~aE~~  373 (419)
                      ||+|||.|+||++||++|++||+++|+.
T Consensus       213 Ls~ETa~G~~P~~~v~~l~~i~~~~E~~  240 (246)
T d1e0ta2         213 LSGESAKGKYPLEAVSIMATICERTDRV  240 (246)
T ss_dssp             ECCC------CHHHHHHHHHHHHHHHTT
T ss_pred             EccccccCCCHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999973
>d1pkla2 c.1.12.1 (A:1-87,A:187-357) Pyruvate kinase, N-terminal domain {Leishmania mexicana [TaxId: 5665]} Back     information, alignment and structure
>d1a3xa2 c.1.12.1 (A:1-87,A:189-366) Pyruvate kinase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2g50a2 c.1.12.1 (A:12-115,A:218-395) Pyruvate kinase, N-terminal domain {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1e0ta1 b.58.1.1 (A:70-167) Pyruvate kinase (PK) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2g50a1 b.58.1.1 (A:116-217) Pyruvate kinase (PK) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1a3xa1 b.58.1.1 (A:88-188) Pyruvate kinase (PK) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1pkla1 b.58.1.1 (A:88-186) Pyruvate kinase (PK) {Leishmania mexicana [TaxId: 5665]} Back     information, alignment and structure
>d1dxea_ c.1.12.5 (A:) 2-dehydro-3-deoxy-galactarate aldolase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1izca_ c.1.12.5 (A:) Macrophomate synthase {Macrophoma commelinae [TaxId: 108330]} Back     information, alignment and structure
>d1sgja_ c.1.12.5 (A:) Citrate lyase, beta subunit {Deinococcus radiodurans [TaxId: 1299]} Back     information, alignment and structure
>d1u5ha_ c.1.12.5 (A:) Citrate lyase, beta subunit {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d2g50a3 c.49.1.1 (A:396-530) Pyruvate kinase, C-terminal domain {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1e0ta3 c.49.1.1 (A:354-470) Pyruvate kinase, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pkla3 c.49.1.1 (A:358-498) Pyruvate kinase, C-terminal domain {Leishmania mexicana [TaxId: 5665]} Back     information, alignment and structure
>d1kbla1 c.1.12.2 (A:510-873) Pyruvate phosphate dikinase, C-terminal domain {Clostridium symbiosum [TaxId: 1512]} Back     information, alignment and structure
>d1a3xa3 c.49.1.1 (A:367-500) Pyruvate kinase, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1vbga1 c.1.12.2 (A:521-876) Pyruvate phosphate dikinase, C-terminal domain {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1h6za1 c.1.12.2 (A:538-903) Pyruvate phosphate dikinase, C-terminal domain {Trypanosoma brucei [TaxId: 5691]} Back     information, alignment and structure
>d1zfja1 c.1.5.1 (A:2-94,A:221-492) Inosine monophosphate dehydrogenase (IMPDH) {Streptococcus pyogenes [TaxId: 1314]} Back     information, alignment and structure
>d1vrda1 c.1.5.1 (A:1-85,A:213-457) Inosine monophosphate dehydrogenase (IMPDH) {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1jr1a1 c.1.5.1 (A:17-112,A:233-514) Inosine monophosphate dehydrogenase (IMPDH) {Chinese hamster (Cricetulus griseus) [TaxId: 10029]} Back     information, alignment and structure
>d1jqoa_ c.1.12.3 (A:) Phosphoenolpyruvate carboxylase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1y0ea_ c.1.2.5 (A:) Putative N-acetylmannosamine-6-phosphate 2-epimerase NanE {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1jqna_ c.1.12.3 (A:) Phosphoenolpyruvate carboxylase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1eepa_ c.1.5.1 (A:) Inosine monophosphate dehydrogenase (IMPDH) {Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]} Back     information, alignment and structure
>d2cu0a1 c.1.5.1 (A:3-96,A:207-480) Inosine monophosphate dehydrogenase (IMPDH) {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1qopa_ c.1.2.4 (A:) Trp synthase alpha-subunit {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1gtea2 c.1.4.1 (A:533-844) Dihydropyrimidine dehydrogenase, domain 4 {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1n7ka_ c.1.10.1 (A:) Deoxyribose-phosphate aldolase DeoC {Archaeon Aeropyrum pernix [TaxId: 56636]} Back     information, alignment and structure
>d1tqja_ c.1.2.2 (A:) D-ribulose-5-phosphate 3-epimerase {Synechocystis sp. PCC 6803 [TaxId: 1148]} Back     information, alignment and structure
>d2flia1 c.1.2.2 (A:3-219) D-ribulose-5-phosphate 3-epimerase {Streptococcus pyogenes [TaxId: 1314]} Back     information, alignment and structure
>d1geqa_ c.1.2.4 (A:) Trp synthase alpha-subunit {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1rpxa_ c.1.2.2 (A:) D-ribulose-5-phosphate 3-epimerase {Potato (Solanum tuberosum) [TaxId: 4113]} Back     information, alignment and structure
>d1pvna1 c.1.5.1 (A:2-99,A:231-494) Inosine monophosphate dehydrogenase (IMPDH) {Tritrichomonas foetus [TaxId: 5724]} Back     information, alignment and structure
>d1q6oa_ c.1.2.3 (A:) 3-keto-L-gulonate 6-phosphate decarboxylase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2tpsa_ c.1.3.1 (A:) Thiamin phosphate synthase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1yxya1 c.1.2.5 (A:4-233) Putative N-acetylmannosamine-6-phosphate 2-epimerase NanE {Streptococcus pyogenes [TaxId: 1314]} Back     information, alignment and structure