Citrus Sinensis ID: 014796
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 418 | ||||||
| 224072162 | 462 | predicted protein [Populus trichocarpa] | 0.992 | 0.898 | 0.669 | 1e-174 | |
| 255537733 | 462 | conserved hypothetical protein [Ricinus | 0.995 | 0.900 | 0.668 | 1e-171 | |
| 224058361 | 429 | predicted protein [Populus trichocarpa] | 0.956 | 0.932 | 0.679 | 1e-169 | |
| 359489711 | 450 | PREDICTED: uncharacterized protein LOC10 | 0.964 | 0.895 | 0.629 | 1e-162 | |
| 297745405 | 420 | unnamed protein product [Vitis vinifera] | 0.964 | 0.959 | 0.629 | 1e-162 | |
| 225426012 | 427 | PREDICTED: uncharacterized protein LOC10 | 0.949 | 0.929 | 0.665 | 1e-160 | |
| 356513299 | 454 | PREDICTED: uncharacterized protein LOC10 | 0.992 | 0.914 | 0.625 | 1e-159 | |
| 147777966 | 420 | hypothetical protein VITISV_028215 [Viti | 0.942 | 0.938 | 0.662 | 1e-159 | |
| 356527674 | 452 | PREDICTED: uncharacterized protein LOC10 | 0.997 | 0.922 | 0.617 | 1e-158 | |
| 388503372 | 422 | unknown [Medicago truncatula] | 0.944 | 0.936 | 0.640 | 1e-156 |
| >gi|224072162|ref|XP_002303634.1| predicted protein [Populus trichocarpa] gi|222841066|gb|EEE78613.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 617 bits (1591), Expect = e-174, Method: Compositional matrix adjust.
Identities = 294/439 (66%), Positives = 342/439 (77%), Gaps = 24/439 (5%)
Query: 1 MGFAFRLFFFKSEEF---LQTPVVDKTEVAE--------ATPPVVATIDVSEYEDQNQMP 49
+GFAFRL F++S F ++T D TE+++ + PP V T+D+ + +P
Sbjct: 27 LGFAFRLLFYQSSSFEPNIETAFADSTELSKEPVSSVDISKPPPV-TVDIPKPPLAADIP 85
Query: 50 QKEAE----------DQNEMPQKEPEIGAEKCDLFTGDWVPNLKGPVYTNASCPLIESHQ 99
+ + D E + P+ G KCDLFTGDW+PN GP+YTN+SC LIE HQ
Sbjct: 86 KPTSSANTSKDSLSADLQEPDDETPQKG--KCDLFTGDWIPNPSGPMYTNSSCSLIEGHQ 143
Query: 100 NCMGNGRPDSGYLYWRWRPENCELPPFNAENFLYLMRNKTWALIGDSISRNHVQSLLCML 159
NCM NGR DSGYL+WRW P +C+LPPFNA+ FL +MRNK WALIGDSISRNHVQSLLC+L
Sbjct: 144 NCMRNGRTDSGYLFWRWNPRDCQLPPFNAQRFLEVMRNKRWALIGDSISRNHVQSLLCIL 203
Query: 160 STVEQAVEVYHDEEYRSKRWHFPSYNFSVSVIWSPFLAKAAIFEDYNGVSTSEVQLHLDK 219
STVEQAVEVYHDEEY+SKRWHFPSYNF++S IWSPFL KAAIFED +GVSTSEVQL LDK
Sbjct: 204 STVEQAVEVYHDEEYKSKRWHFPSYNFTISNIWSPFLVKAAIFEDNDGVSTSEVQLQLDK 263
Query: 220 LDKKWTEQYLNLDYMIISTGKWFLKSSIYYENDTVVGCHYCPKRNLTELGFDFAYRKTLS 279
LD WT Y LDYMIISTGKWFLK++IY+ENDTVVGCH CP +N TE GF FAY K L
Sbjct: 264 LDTNWTNLYQGLDYMIISTGKWFLKAAIYHENDTVVGCHICPGKNFTEKGFVFAYEKALR 323
Query: 280 SVMDFIAASKHKGLVFFRTSTPDHFENGEWHNGGSCQKMMPVKEGDIELKDLNRILRNIE 339
M+FIA SKHKGL+FFRTSTPDHFENGEWHNGG+C K P KEG+IELKDLN+ILR +E
Sbjct: 324 YAMNFIATSKHKGLIFFRTSTPDHFENGEWHNGGNCTKTTPAKEGEIELKDLNKILRTVE 383
Query: 340 LEEFEKAVPRASQNGVKLKLLDFTNLLLLRPDGHPGAYREFQPFAKDKDAKVQNDCLHWC 399
L EFEKA +A++NGV LKLLDFTNLLL RPDGHPG YR+F PFA+DK+AKVQNDCLHWC
Sbjct: 384 LAEFEKASAKAAENGVNLKLLDFTNLLLSRPDGHPGPYRQFHPFAQDKNAKVQNDCLHWC 443
Query: 400 LPGPIDTWNDLIMETVVNG 418
LPGPID WND+IME +NG
Sbjct: 444 LPGPIDYWNDVIMEMAING 462
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255537733|ref|XP_002509933.1| conserved hypothetical protein [Ricinus communis] gi|223549832|gb|EEF51320.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|224058361|ref|XP_002299487.1| predicted protein [Populus trichocarpa] gi|222846745|gb|EEE84292.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|359489711|ref|XP_002276755.2| PREDICTED: uncharacterized protein LOC100263682 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|297745405|emb|CBI40485.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|225426012|ref|XP_002273303.1| PREDICTED: uncharacterized protein LOC100265666 [Vitis vinifera] gi|297742310|emb|CBI34459.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|356513299|ref|XP_003525351.1| PREDICTED: uncharacterized protein LOC100816814 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|147777966|emb|CAN70903.1| hypothetical protein VITISV_028215 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|356527674|ref|XP_003532433.1| PREDICTED: uncharacterized protein LOC100778581 [Glycine max] | Back alignment and taxonomy information |
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| >gi|388503372|gb|AFK39752.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 418 | ||||||
| TAIR|locus:2128489 | 430 | TBL24 "AT4G23790" [Arabidopsis | 0.916 | 0.890 | 0.579 | 1.6e-132 | |
| TAIR|locus:2136113 | 432 | TBL23 "AT4G11090" [Arabidopsis | 0.868 | 0.840 | 0.611 | 3.1e-131 | |
| TAIR|locus:2035342 | 456 | TBL25 "AT1G01430" [Arabidopsis | 0.827 | 0.758 | 0.576 | 5.6e-116 | |
| TAIR|locus:2125048 | 442 | TBL26 "AT4G01080" [Arabidopsis | 0.842 | 0.796 | 0.546 | 1.3e-114 | |
| TAIR|locus:2146062 | 526 | TBL21 "AT5G15890" [Arabidopsis | 0.799 | 0.634 | 0.435 | 8.5e-81 | |
| TAIR|locus:2146077 | 426 | TBL19 "AT5G15900" [Arabidopsis | 0.870 | 0.854 | 0.382 | 1.1e-76 | |
| TAIR|locus:2020628 | 416 | TBL27 "TRICHOME BIREFRINGENCE- | 0.858 | 0.862 | 0.394 | 1.5e-76 | |
| TAIR|locus:2091388 | 414 | TBL22 "AT3G28150" [Arabidopsis | 0.861 | 0.869 | 0.381 | 5.9e-73 | |
| TAIR|locus:2153077 | 501 | YLS7 "AT5G51640" [Arabidopsis | 0.885 | 0.738 | 0.362 | 2.5e-65 | |
| TAIR|locus:2138043 | 533 | TBL18 "AT4G25360" [Arabidopsis | 0.935 | 0.733 | 0.338 | 2.3e-64 |
| TAIR|locus:2128489 TBL24 "AT4G23790" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1267 (451.1 bits), Expect = 1.6e-132, Sum P(2) = 1.6e-132
Identities = 227/392 (57%), Positives = 301/392 (76%)
Query: 32 PVVATIDVSEYEDQNQMPQKEA-EDQNEMPQKEPEIGAEKCDLFTGDWVPNLKGPVYTNA 90
P+ A++ ++E + P+ E+++ +PQ +I EKCDLF G W+P+ GP+YTN
Sbjct: 43 PIFASV-TGKFEARFLPPEIIVPENEDLIPQ---DIEVEKCDLFAGKWIPDSVGPIYTNK 98
Query: 91 SC-PLIESHQNCMGNGRPDSGYLYWRWRPENCELPPFNAENFLYLMRNKTWALIGDSISR 149
SC LI+ HQNC+ NGRPD +LYW+W+P +C LP F+ FL LMR+K+WA IGDSISR
Sbjct: 99 SCGSLIDGHQNCITNGRPDLDFLYWKWKPHDCLLPRFDPRRFLQLMRHKSWAFIGDSISR 158
Query: 150 NHVQSLLCMLSTVEQAVEVYHDEEYRSKRWHFPSYNFSVSVIWSPFLAKAAIFEDYNGVS 209
NHV+SLLCMLST+E+ VEVYHD EY+SKRWHFP +N +VS IWSPFL +AAIFED NGVS
Sbjct: 159 NHVESLLCMLSTIEEPVEVYHDMEYKSKRWHFPLHNLTVSNIWSPFLVQAAIFEDSNGVS 218
Query: 210 TSEVQLHLDKLDKKWTEQYLNLDYMIISTGKWFLKSSIYYENDTVVGCHYCPKR-NLTEL 268
T+ VQLHLD+LD+ WT + DY IISTGKWFLKS+IY+EN +VGCH C ++ ++ EL
Sbjct: 219 TASVQLHLDRLDETWTSLMPSFDYAIISTGKWFLKSAIYHENAKLVGCHNCQEKPHIEEL 278
Query: 269 GFDFAYRKTLSSVMDFIAASKH-KGLVFFRTSTPDHFENGEWHNGGSCQKMMPVKEGDIE 327
GFD+AY +L +VMDF+AA + KG VFFRTSTPDHF+NGEWH+GG+C++ PV + +IE
Sbjct: 279 GFDYAYNASLHNVMDFLAAEDNSKGTVFFRTSTPDHFQNGEWHSGGTCKQTEPVSDEEIE 338
Query: 328 LKDLNRILRNIELEEFEKAV-PRASQNGVKXXXXXXXXXXXXRPDGHPGAYREFQPFAKD 386
+KD+++IL++IE+++F++AV + +Q+G RPDGHPG YR+F+PF KD
Sbjct: 339 IKDVHKILKDIEIDQFKRAVREKTNQDGGNLKLLDFTRMLLTRPDGHPGEYRQFRPFDKD 398
Query: 387 KDAKVQNDCLHWCLPGPIDTWNDLIMETVVNG 418
K+AKVQNDCLHWCLPGP D ND+I+ET+VNG
Sbjct: 399 KNAKVQNDCLHWCLPGPFDYLNDVILETIVNG 430
|
|
| TAIR|locus:2136113 TBL23 "AT4G11090" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2035342 TBL25 "AT1G01430" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2125048 TBL26 "AT4G01080" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2146062 TBL21 "AT5G15890" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2146077 TBL19 "AT5G15900" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2020628 TBL27 "TRICHOME BIREFRINGENCE-LIKE 27" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2091388 TBL22 "AT3G28150" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2153077 YLS7 "AT5G51640" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2138043 TBL18 "AT4G25360" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 418 | |||
| pfam13839 | 270 | pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Estera | 2e-97 | |
| PLN02629 | 387 | PLN02629, PLN02629, powdery mildew resistance 5 | 2e-40 | |
| pfam14416 | 55 | pfam14416, PMR5N, PMR5 N terminal Domain | 1e-25 |
| >gnl|CDD|222410 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
|---|
Score = 292 bits (749), Expect = 2e-97
Identities = 108/294 (36%), Positives = 153/294 (52%), Gaps = 27/294 (9%)
Query: 123 LPPFNAENFLYLMRNKTWALIGDSISRNHVQSLLCMLSTVEQAVEVYHDEEYRSKRWHFP 182
LP F+A+ FL +R K +GDS+SRN +SL+C+LS VE + + R R+ F
Sbjct: 1 LPRFDAQQFLERLRGKRVVFVGDSLSRNQWESLVCLLSQVEPPKGKTLERDGRLFRFRFK 60
Query: 183 SYNFSVSVIWSPFLAKAAIFEDYNGVSTSEVQLHLDKLDKKWTEQYLNLDYMIISTGKWF 242
YN ++ WSPFL ++ + + L LD +D+KW++ + D ++ ++G W+
Sbjct: 61 DYNVTIEFYWSPFLVES------DNAEEGKRVLKLDSIDEKWSKLWPGADVLVFNSGHWW 114
Query: 243 LKSSIYYENDTVVGCHYCPKRNLTELGFDFAYRKTLSSVMDFIAA--SKHKGLVFFRTST 300
L +Y G YC K N E+GF AYRK L + ++ K VFFRT +
Sbjct: 115 LHRKVYI------GWDYCQKSNYKEMGFLDAYRKALETWAKWVDVNLPPSKTRVFFRTFS 168
Query: 301 PDHFENGEWHNGGSCQKMMPVKEGDIELKDLNRILRNIELEEFEKAVPRASQNGVKLKLL 360
P HFE GEW+ GGSC + P+ E K L + +I E +A +KLL
Sbjct: 169 PVHFEGGEWNTGGSCYETEPLLG--SEYKGLTPEMIDIVNEVLSRA-----AMKTPVKLL 221
Query: 361 DFTNLLLLRPDGHPGAYREFQPFAKDKDAKVQNDCLHWCLPGPIDTWNDLIMET 414
D T L R DGHP YR+ P K+ DCLHWCLPG DTWN+L++
Sbjct: 222 DITLLSQYRKDGHPSVYRKPGPPKKE------QDCLHWCLPGVPDTWNELLLAL 269
|
The PC-Esterase family is comprised of Cas1p, the Homo sapiens C7orf58, Arabidopsis thaliana PMR5 and a group of plant freezing resistance/coldacclimatization proteins typified by Arabidopsis thaliana ESKIMO1, animal FAM55D proteins, and animal FAM113 proteins. The PC-Esterase family has features that are both similar and different from the canonical GDSL/SGNH superfamily. The members of this family are predicted to have Acyl esterase activity and predicted to modify cell-surface biopolymers such as glycans and glycoproteins. The Cas1p protein has a Cas1_AcylT domain, in addition, with the opposing acyltransferase activity. The C7orf58 family has a ATP-Grasp domain fused to the PC-Esterase and is the first identified secreted tubulin-tyrosine ligase like enzyme in eukaryotes. The plant family with PMR5, ESK1, TBL3 etc have a N-terminal C rich potential sugar binding domain followed by the PC-Esterase domain. Length = 270 |
| >gnl|CDD|215338 PLN02629, PLN02629, powdery mildew resistance 5 | Back alignment and domain information |
|---|
| >gnl|CDD|206583 pfam14416, PMR5N, PMR5 N terminal Domain | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 418 | |||
| PLN02629 | 387 | powdery mildew resistance 5 | 100.0 | |
| PF13839 | 263 | PC-Esterase: GDSL/SGNH-like Acyl-Esterase family f | 100.0 | |
| PF14416 | 55 | PMR5N: PMR5 N terminal Domain | 99.92 | |
| cd01842 | 183 | SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SG | 98.01 | |
| cd01841 | 174 | NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfa | 95.68 | |
| COG2845 | 354 | Uncharacterized protein conserved in bacteria [Fun | 89.12 | |
| cd01834 | 191 | SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SG | 88.37 | |
| cd04502 | 171 | SGNH_hydrolase_like_7 Members of the SGNH-hydrolas | 82.45 | |
| cd01836 | 191 | FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, Fee | 81.12 |
| >PLN02629 powdery mildew resistance 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-108 Score=827.71 Aligned_cols=329 Identities=30% Similarity=0.603 Sum_probs=285.3
Q ss_pred CCCCCCCCCccCceecCCCCCCcCCCCCC-CcccccCccCCCCCCCCcceeeeecCCCCCCCCCHHHHHHHHcCCeeEEe
Q 014796 65 EIGAEKCDLFTGDWVPNLKGPVYTNASCP-LIESHQNCMGNGRPDSGYLYWRWRPENCELPPFNAENFLYLMRNKTWALI 143 (418)
Q Consensus 65 ~~~~~~Cd~~~G~WV~d~~~PlY~~~~Cp-~i~~~~~C~~nGRpD~~yl~WrWqP~~C~Lp~fd~~~fl~~LrgK~i~FV 143 (418)
..+.++||+|+|+||+|+++|+|++++|| ||+++|||++|||||.+|++|||||++|+||+|||.+||++||||+||||
T Consensus 47 ~~~~~~CD~f~G~WV~D~s~PlY~~~~Cp~fi~~~~nC~knGRPD~~Yl~WRWqP~gC~LPRFda~~fLe~~RgKrl~FV 126 (387)
T PLN02629 47 QANQSTCALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFNGLEFLLKMKGKTVMFV 126 (387)
T ss_pred CCCccccCCCCCeEecCCCCCCCCCCCCccccccccchhhcCCCCcchhhccccCCCCCCCCcCHHHHHHHhcCCeEEEe
Confidence 34678899999999999999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred echhhHHHHHHHHHhhcccccceeeeeccccceeeEEeccCceEEEEEEccccccccccccCCCCccceeEEEecccchh
Q 014796 144 GDSISRNHVQSLLCMLSTVEQAVEVYHDEEYRSKRWHFPSYNFSVSVIWSPFLAKAAIFEDYNGVSTSEVQLHLDKLDKK 223 (418)
Q Consensus 144 GDSl~Rn~~~SL~ClL~~~~~~~~v~~~~~~~~~~~~f~~~nvtv~~~wspfLv~~~~~~~~~~~~~~~~~l~lD~ld~~ 223 (418)
||||+|||||||+|||+++++...+......+.++|+|++||+||+||||||||+.+.. . +...|+||+++.
T Consensus 127 GDSL~RNQ~eSLvClL~~~~p~~~~~~~~~~~~~~~~F~~yN~TV~~ywspfLV~~~~~---~----~~~~l~LD~id~- 198 (387)
T PLN02629 127 GDSLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFLDYGVSISFYKAPYLVDIDAV---Q----GKRVLKLEEISG- 198 (387)
T ss_pred ccccchhHHHHHHHHhhccCCCCceeeecCCceEEEEeccCCEEEEEEecceEEeeecC---C----CceeEEecCcch-
Confidence 99999999999999999877654333345567889999999999999999999997632 1 224699999885
Q ss_pred HHhhcCCccEEEEeeceeeeecceeccCCeEeccccC--CCCCccccchHHHHHHHHHHHHHHHH--hcCCCcEEEEecC
Q 014796 224 WTEQYLNLDYMIISTGKWFLKSSIYYENDTVVGCHYC--PKRNLTELGFDFAYRKTLSSVMDFIA--ASKHKGLVFFRTS 299 (418)
Q Consensus 224 ~~~~~~~~DVlV~ntG~W~~~~~i~~~~~~~~g~~~~--~~~~~~~~~~~~Ayr~al~t~~~~v~--~~~~~t~VffRT~ 299 (418)
+++.|+++|||||||||||.++. .+.||+++ .+.++++|++..|||+||+||++||+ +++.+|+|||||+
T Consensus 199 ~a~~w~~~DvlVfntghWw~~~~------~~~~~~~~~~g~~~~~~~~~~~A~r~al~T~~~wv~~~~~~~kt~vffrT~ 272 (387)
T PLN02629 199 NANAWRDADVLIFNTGHWWSHQG------SLQGWDYIESGGTYYQDMDRLVALEKALRTWAYWVDTNVDRSRTRVFFQSI 272 (387)
T ss_pred hhhhhccCCEEEEeCccccCCCC------eeEEeeeeccCCccccCccHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEec
Confidence 58899999999999999999864 34676665 33467899999999999999999997 6778999999999
Q ss_pred CCCCCCCCCCCCCC-----CC-CcccccCCCCcccchhhHHHhhhhHHHHHhHhhhhccCCceeEEEecccccccCCCCC
Q 014796 300 TPDHFENGEWHNGG-----SC-QKMMPVKEGDIELKDLNRILRNIELEEFEKAVPRASQNGVKLKLLDFTNLLLLRPDGH 373 (418)
Q Consensus 300 SP~Hf~~g~W~~gg-----~C-~~T~P~~~~e~~~~~~~~~~~~~~~eef~~~~~~~~~~~~~v~lLDIt~lS~~R~DgH 373 (418)
||+||+||+||+|| +| ++|+|+.++++ .+....+|+ ++|++ .+.++.+|+|||||+||++|||||
T Consensus 273 SP~Hfe~g~Wn~gg~~~~~~C~~et~P~~~~~~-~~~~~~~~~--~ve~v------~~~~~~~v~lLDIT~ls~lR~DgH 343 (387)
T PLN02629 273 SPTHYNPSEWSAGASTTTKNCYGETTPMSGMTY-PGAYPDQMR--VVDEV------IRGMHNPAYLLDITLLSELRKDGH 343 (387)
T ss_pred CcccccCCCcCCCCCCCCCCCccCCccCcCccc-cCcchHHHH--HHHHH------HHhcCCceEEEechhhhhcCCCCC
Confidence 99999999999875 58 79999986543 344555555 22333 334568999999999999999999
Q ss_pred CCCcccCCCcccCCCCCCCCCcccccCCCcchHHHHHHHHHHh
Q 014796 374 PGAYREFQPFAKDKDAKVQNDCLHWCLPGPIDTWNDLIMETVV 416 (418)
Q Consensus 374 Ps~y~~~~~~~~~~~~~~~~DClHWCLPGv~DtWNelL~~~L~ 416 (418)
||+|++..+.++++++..++||+||||||||||||||||++|+
T Consensus 344 Ps~Y~~~~~~~~~~~p~~~~DC~HWCLPGvpDTWNelL~a~L~ 386 (387)
T PLN02629 344 PSIYSGDLSPSQRANPDRSADCSHWCLPGLPDTWNQLFYTALF 386 (387)
T ss_pred cccccCCCchhhccCCCCCCCcccccCCCCCccHHHHHHHHHh
Confidence 9999876666777888889999999999999999999999996
|
|
| >PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
|---|
| >PF14416 PMR5N: PMR5 N terminal Domain | Back alignment and domain information |
|---|
| >cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily | Back alignment and domain information |
|---|
| >cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >COG2845 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily | Back alignment and domain information |
|---|
| >cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 418 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-06 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 49.1 bits (116), Expect = 2e-06
Identities = 71/451 (15%), Positives = 128/451 (28%), Gaps = 139/451 (30%)
Query: 31 PPVVATIDVSEYEDQNQMPQKEAEDQNEMPQKEPEIGAEKCDLFTGDWVPNLKGPVYTNA 90
V D + +D + + E + + K+ G + LF W K
Sbjct: 27 DAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLR--LF---WTLLSKQE----- 76
Query: 91 SCPLIESHQNCMGNG-RPDSGYLYWRWRPENCELPPFNAENFLYLMRNKTW----ALIGD 145
E Q + R + +L + E P ++ R++ +
Sbjct: 77 -----EMVQKFVEEVLRINYKFLMSPIKTE-QRQPSMMTRMYIE-QRDRLYNDNQVFAKY 129
Query: 146 SISR--------NHVQSL-------LC-ML----STVEQAVEVYHDEEYRSKRWHFPSYN 185
++SR + L + +L + V A++V + + K
Sbjct: 130 NVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWV--ALDVCLSYKVQCK-------- 179
Query: 186 FSVSVIWSPFLAKAAIFEDYNGVSTSEVQLHLDKL----DKKWT---EQYLNLDYMIIST 238
+ W N S V L KL D WT + N+ I S
Sbjct: 180 MDFKIFWLNL---------KNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSI 230
Query: 239 GKW---FLKSSIYYEN----DTVVGCHYCPKRNLTEL-GFDFAYRKTL-----SSVMDFI 285
LKS Y V +N F+ + K L V DF+
Sbjct: 231 QAELRRLLKSKPYENCLLVLLNV--------QNAKAWNAFNLSC-KILLTTRFKQVTDFL 281
Query: 286 AAS--KHKGLVFFRTS-TPDHFEN--GEWHNGGSCQ-------KMMPVKEGDI--ELKD- 330
+A+ H L + TPD ++ ++ + Q P + I ++D
Sbjct: 282 SAATTTHISLDHHSMTLTPDEVKSLLLKYLD-CRPQDLPREVLTTNPRRLSIIAESIRDG 340
Query: 331 LNRI--LRNIELEEFEKAVPRASQNGVKLKLLDFTNLLLLRPDGHPGAYREFQPFAKDKD 388
L +++ ++ + L +L+ P + + F
Sbjct: 341 LATWDNWKHVNCDKLTTII------ESSLNVLE--------PAEYRKMFDRLSVF--PPS 384
Query: 389 AKVQNDCLHWCLPGPIDT----WNDLIMETV 415
A + P W D+I V
Sbjct: 385 AHI-----------PTILLSLIWFDVIKSDV 404
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 418 | |||
| 4h08_A | 200 | Putative hydrolase; GDSL-like lipase/acylhydrolase | 96.57 |
| >4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=96.57 E-value=0.038 Score=48.98 Aligned_cols=51 Identities=16% Similarity=0.292 Sum_probs=36.8
Q ss_pred CCccEEEEeeceeeeecceeccCCeEeccccCCCCCccccchHHHHHHHHHHHHHHHHhcCCCcEEEEecCCCCC
Q 014796 229 LNLDYMIISTGKWFLKSSIYYENDTVVGCHYCPKRNLTELGFDFAYRKTLSSVMDFIAASKHKGLVFFRTSTPDH 303 (418)
Q Consensus 229 ~~~DVlV~ntG~W~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~Ayr~al~t~~~~v~~~~~~t~VffRT~SP~H 303 (418)
..+|+|||+.|..=. .. -.+.|+..++++++.+....++++|++-+..|..
T Consensus 73 ~~pd~Vvi~~G~ND~--------------------~~----~~~~~~~~l~~ii~~l~~~~p~~~ii~~~~~P~~ 123 (200)
T 4h08_A 73 TKFDVIHFNNGLHGF--------------------DY----TEEEYDKSFPKLIKIIRKYAPKAKLIWANTTPVR 123 (200)
T ss_dssp SCCSEEEECCCSSCT--------------------TS----CHHHHHHHHHHHHHHHHHHCTTCEEEEECCCCCE
T ss_pred CCCCeEEEEeeeCCC--------------------CC----CHHHHHHHHHHHHHHHhhhCCCccEEEeccCCCc
Confidence 578999999885410 00 1346788888888877655788899999998865
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 418 | |||
| d3bzwa1 | 248 | Uncharacterized protein BT2961 {Bacteroides thetai | 82.06 |
| >d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: SGNH hydrolase family: BT2961-like domain: Uncharacterized protein BT2961 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=82.06 E-value=0.21 Score=41.18 Aligned_cols=29 Identities=10% Similarity=0.084 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHHhcCCCcEEEEecCCC
Q 014796 273 AYRKTLSSVMDFIAASKHKGLVFFRTSTP 301 (418)
Q Consensus 273 Ayr~al~t~~~~v~~~~~~t~VffRT~SP 301 (418)
.|+..++.+++.+....+...+++-+..+
T Consensus 124 ~~~~~~~~~i~~l~~~~~~~~i~~~~~~~ 152 (248)
T d3bzwa1 124 TYRGRINIGITQLKKLFPDKQIVLLTPLH 152 (248)
T ss_dssp SHHHHHHHHHHHHHHHCTTSEEEEECCCC
T ss_pred HHHHHHHHHHHHHHHhCCcccceeeeccc
Confidence 45666666666666456666777666543
|