Citrus Sinensis ID: 014850

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------
MTVFSNTERMNHPTIVKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDRPENLCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQKIHRSQRCR
ccccccccccccccEEEEEEcccccccccccEEEEEcccccccccccccccHHHHHHHHHcccccccEEEEEccccccccHHHHHHHHHHHccccccccEEEEEcccEEccccccccccccccccccccccccccccccccccHHHHHccccccccccccHHHHHHHHHccccHHHHHHHHHHHccccccccccccHHHHHHHHHHccccccccccccccccEEcccccccHHHHHHHHcccEEEEEcccccccccccccccccccHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccccccEEEccccccccccc
ccccccccccccccEEEEEEcccccccccccEEEEEEcccccccccccHHHHHHHHHHHHHHHccccEEEEEccccccccHHHHHHHHHHHccccccccEEEEEccccccccccccEEEEEccccccccccccEEEccccHEEEEEEcccccccccccccccHHHHHHHccccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHcccccccccccEEEEEEccccHHHHHcHHHHccccEEEEEccccccccccccccHHHHHHHHHHHHHccEEEEEcccccHHHcccccccHHHHHHHHHHEcccccHHHHHHHHHHHHHHHcccccEcccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHccHEEEEcHHHHHHHHHHHHHHHHHHcccEEEEEEEccccccccc
mtvfsntermnhpTIVKVISenkgglsdeiphlvyisrekrpkhphhykagAMNVLTRVSglmtnapfmlnvdcdmyannPEIVLQAMCLHLgsknenefafiqspqyfydrpenlCILNEYigkgivgiqgpfyqgtgtfhrrdVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTlegktggyssnisrsldeAHRVADcgyeygsswgdevgclygataednltglvihskgwrsgyclpiphaflgcaspsgpagmrQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWglrsipelcyialpayciitnstflpkvqeptvlIPLALFLIYKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQKIHRSQRCR
mtvfsntermnhptivkvisenkgglsdEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDRPENLCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAaqtlegktggysSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQKIHRSQRCR
MTVFSNTERMNHPTIVKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDRPENLCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQKIHRSQRCR
**************IVKVIS****GLSDEIPHLVYISR*******HHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDRPENLCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIK*********************DEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASP******RQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQK********
MTVFS**ERMNHPTIVKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDRPENLCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTG***SNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFE************
********RMNHPTIVKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDRPENLCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQK********
MTVFSNTERMNHPTIVKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDRPENLCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQK********
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MTVFSNTERMNHPTIVKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDRPENLCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQKIHRSQRCR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query417 2.2.26 [Sep-21-2011]
O80891 755 Cellulose synthase-like p yes no 0.966 0.533 0.513 1e-117
Q8RX83 755 Cellulose synthase-like p no no 0.966 0.533 0.498 1e-116
Q339N5 750 Cellulose synthase-like p yes no 0.973 0.541 0.502 1e-110
Q0WT40 757 Cellulose synthase-like p no no 0.961 0.529 0.489 1e-109
O23386 757 Cellulose synthase-like p no no 0.959 0.528 0.484 1e-108
O80899 757 Cellulose synthase-like p no no 0.971 0.535 0.483 1e-107
Q7XUU0 792 Putative cellulose syntha no no 0.964 0.507 0.485 1e-104
O80898 757 Cellulose synthase-like p no no 0.964 0.531 0.484 1e-103
Q7PC71 762 Cellulose synthase-like p N/A no 0.872 0.477 0.435 1e-90
Q7XUT9 762 Cellulose synthase-like p no no 0.872 0.477 0.435 1e-90
>sp|O80891|CSLB4_ARATH Cellulose synthase-like protein B4 OS=Arabidopsis thaliana GN=CSLB4 PE=3 SV=1 Back     alignment and function desciption
 Score =  420 bits (1080), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 215/419 (51%), Positives = 276/419 (65%), Gaps = 16/419 (3%)

Query: 4   FSNTERMNHPTIVKVISENKGGLSDE--IPHLVYISREKRPKHPHHYKAGAMNVLTRVSG 61
           F NT+  +H TIVKV+ ENKGG+ DE  +PH+VYISREKRP H HHYKAGAMN L RVSG
Sbjct: 223 FLNTKSNDHSTIVKVVWENKGGVGDEKEVPHVVYISREKRPNHFHHYKAGAMNFLVRVSG 282

Query: 62  LMTNAPFMLNVDCDMYANNPEIVLQAMCLHL-GSKNENEFAFIQSPQYFYD-RPENLCIL 119
           LMTNAP+MLNVDCDMY N  ++V QAMC+ L  S + N  AF+Q PQ FYD     L +L
Sbjct: 283 LMTNAPYMLNVDCDMYVNEADVVRQAMCIFLQKSMDSNHCAFVQYPQDFYDSNVGELTVL 342

Query: 120 NEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLCLDQIEHQGNI---------VEDELLKKF 170
             Y+G+GI GIQGP Y G+G FH R V+YGL LD +   G++          E+ L ++F
Sbjct: 343 QLYLGRGIAGIQGPQYAGSGCFHTRRVMYGLSLDDLGDDGSLSSIATRKYLAEESLTREF 402

Query: 171 GNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAED 230
           GNSKE +KS    L+ K      N+  SL+ A  +  C YEY +SWG  +G LY +T ED
Sbjct: 403 GNSKEMVKSVVDALQRKPFP-QKNLKDSLETAQEMGHCHYEYQTSWGKNIGWLYDSTTED 461

Query: 231 NLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILAT 290
             T + IHS+GW S Y  P P AFLGC    GP  M QQ+RWATGLLEILF+K++P++  
Sbjct: 462 VNTSIGIHSRGWTSSYIFPDPPAFLGCMPQGGPEVMVQQRRWATGLLEILFNKQSPLIGM 521

Query: 291 LIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFL 350
              K++FRQ LAYL++ +WGLRSIPEL Y  LPAYC++ NS   PK     ++I   L  
Sbjct: 522 FCRKIRFRQSLAYLYVFSWGLRSIPELFYCLLPAYCLLHNSALFPKGVYLGIII--TLVG 579

Query: 351 IYKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQK 409
           I+ LYTL E++  G SI+SW+V     RI TT +WLF +++  L+  G S+ VF +T+K
Sbjct: 580 IHCLYTLWEFMNLGFSIQSWYVTQSFGRIKTTCSWLFSVLDVILKLLGISKTVFIVTKK 638
Thought to be a Golgi-localized beta-glycan synthase that polymerize the backbones of noncellulosic polysaccharides (hemicelluloses) of plant cell wall.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -
>sp|Q8RX83|CSLB3_ARATH Cellulose synthase-like protein B3 OS=Arabidopsis thaliana GN=CSLB3 PE=2 SV=1 Back     alignment and function description
>sp|Q339N5|CSLH1_ORYSJ Cellulose synthase-like protein H1 OS=Oryza sativa subsp. japonica GN=CSLH1 PE=2 SV=2 Back     alignment and function description
>sp|Q0WT40|CSLB5_ARATH Cellulose synthase-like protein B5 OS=Arabidopsis thaliana GN=CSLB5 PE=2 SV=2 Back     alignment and function description
>sp|O23386|CSLB6_ARATH Cellulose synthase-like protein B6 OS=Arabidopsis thaliana GN=CSLB6 PE=2 SV=2 Back     alignment and function description
>sp|O80899|CSLB2_ARATH Cellulose synthase-like protein B2 OS=Arabidopsis thaliana GN=CSLB2 PE=2 SV=1 Back     alignment and function description
>sp|Q7XUU0|CSLH3_ORYSJ Putative cellulose synthase-like protein H3 OS=Oryza sativa subsp. japonica GN=CSLH3 PE=3 SV=3 Back     alignment and function description
>sp|O80898|CSLB1_ARATH Cellulose synthase-like protein B1 OS=Arabidopsis thaliana GN=CSLB1 PE=2 SV=2 Back     alignment and function description
>sp|Q7PC71|CSLH2_ORYSI Cellulose synthase-like protein H2 OS=Oryza sativa subsp. indica GN=CSLH2 PE=2 SV=1 Back     alignment and function description
>sp|Q7XUT9|CSLH2_ORYSJ Cellulose synthase-like protein H2 OS=Oryza sativa subsp. japonica GN=CSLH2 PE=2 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query417
255576879 749 transferase, putative [Ricinus communis] 0.978 0.544 0.615 1e-153
224068967 749 predicted protein [Populus trichocarpa] 0.992 0.552 0.614 1e-152
224128982 746 hypothetical protein POPTRDRAFT_246659 [ 0.990 0.553 0.606 1e-151
429326480 746 cellulose synthase-like protein [Populus 0.980 0.548 0.598 1e-147
297739182 1566 unnamed protein product [Vitis vinifera] 0.990 0.263 0.601 1e-145
359485493 751 PREDICTED: cellulose synthase-like prote 0.980 0.544 0.591 1e-144
297739175 751 unnamed protein product [Vitis vinifera] 0.980 0.544 0.596 1e-144
359485495 756 PREDICTED: cellulose synthase-like prote 0.980 0.541 0.584 1e-143
359485623 766 PREDICTED: cellulose synthase-like prote 0.980 0.533 0.575 1e-142
359485619 751 PREDICTED: cellulose synthase-like prote 0.980 0.544 0.586 1e-141
>gi|255576879|ref|XP_002529325.1| transferase, putative [Ricinus communis] gi|223531196|gb|EEF33042.1| transferase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  548 bits (1411), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 262/426 (61%), Positives = 320/426 (75%), Gaps = 18/426 (4%)

Query: 1   MTVFSNTERMNHPTIVKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVS 60
           + VFSN +R NHP+I+KVI ENK GLSD +PHLVYISREKR KH HHYKAGAMNVLTRVS
Sbjct: 221 LAVFSNIDRRNHPSIIKVIWENKKGLSDGLPHLVYISREKRLKHAHHYKAGAMNVLTRVS 280

Query: 61  GLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDRPEN----- 115
           GL+TNAPFMLNVDCDMY N+P++V +AMC  LGS NE EFAF+Q PQ FYD  ++     
Sbjct: 281 GLVTNAPFMLNVDCDMYVNDPQVVRRAMCFLLGSSNEREFAFVQFPQVFYDELKDDPFGS 340

Query: 116 -LCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLCLDQIEHQGNIV-----------E 163
            L ++ EY+G+GI G+QGPFY GTG FHRR V+YGLC D +  + N             +
Sbjct: 341 TLAVVYEYMGRGIAGLQGPFYGGTGCFHRRKVIYGLCPDDVGTEKNNATPVSSTYFVHSD 400

Query: 164 DELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCL 223
            ELL  FGNS EFIKSAAQ L+GKT     N+S  ++  ++VA CGYEYG++WG EVG  
Sbjct: 401 KELLNIFGNSMEFIKSAAQALQGKTTS-PRNLSNLVETEYQVAGCGYEYGTAWGTEVGWQ 459

Query: 224 YGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSK 283
           YG+T ED LTGL+IHS+GWRS YC P P AFLGC+  SGP  + QQKRWATGL+EIL  +
Sbjct: 460 YGSTTEDVLTGLMIHSRGWRSAYCTPEPPAFLGCSPSSGPTLLTQQKRWATGLVEILVCR 519

Query: 284 RNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVL 343
           ++PI+  +  KLQFRQCL YL+ILTWGLRSIPELCY+ LPAYCII+NS FLPK  EP + 
Sbjct: 520 KSPIVTAITAKLQFRQCLVYLFILTWGLRSIPELCYMLLPAYCIISNSNFLPKFNEPPIY 579

Query: 344 IPLALFLIYKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAV 403
             +AL ++Y LYT+LEY+Q GLSIR+WW    MAR++TTSAWL G+++  L+  G SE V
Sbjct: 580 GYIALIIVYSLYTILEYLQTGLSIRAWWNKQKMARVITTSAWLIGVLSVVLKILGISETV 639

Query: 404 FEITQK 409
           FE+TQK
Sbjct: 640 FEVTQK 645

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224068967|ref|XP_002302868.1| predicted protein [Populus trichocarpa] gi|222844594|gb|EEE82141.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224128982|ref|XP_002320471.1| hypothetical protein POPTRDRAFT_246659 [Populus trichocarpa] gi|222861244|gb|EEE98786.1| hypothetical protein POPTRDRAFT_246659 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|429326480|gb|AFZ78580.1| cellulose synthase-like protein [Populus tomentosa] Back     alignment and taxonomy information
>gi|297739182|emb|CBI28833.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359485493|ref|XP_003633282.1| PREDICTED: cellulose synthase-like protein H1-like isoform 2 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297739175|emb|CBI28826.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359485495|ref|XP_002270376.2| PREDICTED: cellulose synthase-like protein H1-like isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|359485623|ref|XP_003633298.1| PREDICTED: cellulose synthase-like protein H1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|359485619|ref|XP_002269831.2| PREDICTED: cellulose synthase-like protein H1-like [Vitis vinifera] gi|297739173|emb|CBI28824.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query417
TAIR|locus:2060211 755 CSLB04 "AT2G32540" [Arabidopsi 0.966 0.533 0.513 3.4e-109
TAIR|locus:2060263 755 CSLB03 "AT2G32530" [Arabidopsi 0.966 0.533 0.498 1.1e-108
TAIR|locus:2129915 757 ATCSLB05 "AT4G15290" [Arabidop 0.961 0.529 0.489 7.7e-103
TAIR|locus:2060216 757 CSLB02 "AT2G32620" [Arabidopsi 0.971 0.535 0.483 2.7e-100
TAIR|locus:2060285 757 CSLB01 "AT2G32610" [Arabidopsi 0.961 0.529 0.488 3.5e-98
TAIR|locus:2040080 1065 CESA10 "cellulose synthase 10" 0.587 0.230 0.362 3.3e-63
TAIR|locus:2172457 1049 CESA4 "cellulose synthase A4" 0.633 0.251 0.355 1.4e-62
TAIR|locus:2178193 1069 CESA5 "cellulose synthase 5" [ 0.575 0.224 0.370 2e-62
TAIR|locus:2176090 1084 CESA6 "cellulose synthase 6" [ 0.601 0.231 0.342 2.6e-62
TAIR|locus:2124167 985 IRX1 "IRREGULAR XYLEM 1" [Arab 0.606 0.256 0.338 4.5e-61
TAIR|locus:2060211 CSLB04 "AT2G32540" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1079 (384.9 bits), Expect = 3.4e-109, P = 3.4e-109
 Identities = 215/419 (51%), Positives = 276/419 (65%)

Query:     4 FSNTERMNHPTIVKVISENKGGLSDE--IPHLVYISREKRPKHPHHYKAGAMNVLTRVSG 61
             F NT+  +H TIVKV+ ENKGG+ DE  +PH+VYISREKRP H HHYKAGAMN L RVSG
Sbjct:   223 FLNTKSNDHSTIVKVVWENKGGVGDEKEVPHVVYISREKRPNHFHHYKAGAMNFLVRVSG 282

Query:    62 LMTNAPFMLNVDCDMYANNPEIVLQAMCLHLG-SKNENEFAFIQSPQYFYD-RPENLCIL 119
             LMTNAP+MLNVDCDMY N  ++V QAMC+ L  S + N  AF+Q PQ FYD     L +L
Sbjct:   283 LMTNAPYMLNVDCDMYVNEADVVRQAMCIFLQKSMDSNHCAFVQYPQDFYDSNVGELTVL 342

Query:   120 NEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLCLDQIEHQGNI---------VEDELLKKF 170
               Y+G+GI GIQGP Y G+G FH R V+YGL LD +   G++          E+ L ++F
Sbjct:   343 QLYLGRGIAGIQGPQYAGSGCFHTRRVMYGLSLDDLGDDGSLSSIATRKYLAEESLTREF 402

Query:   171 GNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAED 230
             GNSKE +KS    L+ K      N+  SL+ A  +  C YEY +SWG  +G LY +T ED
Sbjct:   403 GNSKEMVKSVVDALQRKPFP-QKNLKDSLETAQEMGHCHYEYQTSWGKNIGWLYDSTTED 461

Query:   231 NLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILAT 290
               T + IHS+GW S Y  P P AFLGC    GP  M QQ+RWATGLLEILF+K++P++  
Sbjct:   462 VNTSIGIHSRGWTSSYIFPDPPAFLGCMPQGGPEVMVQQRRWATGLLEILFNKQSPLIGM 521

Query:   291 LIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFL 350
                K++FRQ LAYL++ +WGLRSIPEL Y  LPAYC++ NS   PK     ++I L    
Sbjct:   522 FCRKIRFRQSLAYLYVFSWGLRSIPELFYCLLPAYCLLHNSALFPKGVYLGIIITLVG-- 579

Query:   351 IYKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQK 409
             I+ LYTL E++  G SI+SW+V     RI TT +WLF +++  L+  G S+ VF +T+K
Sbjct:   580 IHCLYTLWEFMNLGFSIQSWYVTQSFGRIKTTCSWLFSVLDVILKLLGISKTVFIVTKK 638
GO:0000271 "polysaccharide biosynthetic process" evidence=ISS
GO:0005794 "Golgi apparatus" evidence=ISM
GO:0016020 "membrane" evidence=IEA
GO:0016740 "transferase activity" evidence=ISS
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS
GO:0016759 "cellulose synthase activity" evidence=ISS
GO:0016760 "cellulose synthase (UDP-forming) activity" evidence=IEA
GO:0030244 "cellulose biosynthetic process" evidence=IEA
TAIR|locus:2060263 CSLB03 "AT2G32530" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2129915 ATCSLB05 "AT4G15290" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2060216 CSLB02 "AT2G32620" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2060285 CSLB01 "AT2G32610" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2040080 CESA10 "cellulose synthase 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2172457 CESA4 "cellulose synthase A4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2178193 CESA5 "cellulose synthase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2176090 CESA6 "cellulose synthase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2124167 IRX1 "IRREGULAR XYLEM 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.10.691
4th Layer2.4.1.12LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query417
PLN02190 756 PLN02190, PLN02190, cellulose synthase-like protei 1e-163
pfam03552 716 pfam03552, Cellulose_synt, Cellulose synthase 2e-84
PLN02893734 PLN02893, PLN02893, Cellulose synthase-like protei 4e-84
PLN02189 1040 PLN02189, PLN02189, cellulose synthase 9e-78
PLN02436 1094 PLN02436, PLN02436, cellulose synthase A 4e-76
PLN02400 1085 PLN02400, PLN02400, cellulose synthase 1e-74
PLN02638 1079 PLN02638, PLN02638, cellulose synthase A (UDP-form 2e-74
PLN02195 977 PLN02195, PLN02195, cellulose synthase A 1e-72
PLN02248 1135 PLN02248, PLN02248, cellulose synthase-like protei 4e-60
PLN02915 1044 PLN02915, PLN02915, cellulose synthase A [UDP-form 8e-39
PLN02915 1044 PLN02915, PLN02915, cellulose synthase A [UDP-form 7e-35
cd06421234 cd06421, CESA_CelA_like, CESA_CelA_like are involv 1e-09
TIGR03030 713 TIGR03030, CelA, cellulose synthase catalytic subu 3e-08
cd06421234 cd06421, CESA_CelA_like, CESA_CelA_like are involv 6e-08
PRK11498 852 PRK11498, bcsA, cellulose synthase catalytic subun 2e-06
COG1215439 COG1215, COG1215, Glycosyltransferases, probably i 0.003
>gnl|CDD|215122 PLN02190, PLN02190, cellulose synthase-like protein Back     alignment and domain information 
 Score =  475 bits (1225), Expect = e-163
 Identities = 216/419 (51%), Positives = 281/419 (67%), Gaps = 17/419 (4%)

Query: 4   FSNTERMNHPTIVKVISENKGGLSD--EIPHLVYISREKRPKHPHHYKAGAMNVLTRVSG 61
           FSNT+  +H TIVKV+ ENKGG+ D  E+PHLVYISREKRP + HHYKAGAMN L RVSG
Sbjct: 223 FSNTKPNDHSTIVKVVWENKGGVGDEKEVPHLVYISREKRPNYLHHYKAGAMNFLVRVSG 282

Query: 62  LMTNAPFMLNVDCDMYANNPEIVLQAMCLHL-GSKNENEFAFIQSPQYFYDRPEN-LCIL 119
           LMTNAP+MLNVDCDMYAN  ++V QAMC+ L  SKN N  AF+Q PQ FYD   N L +L
Sbjct: 283 LMTNAPYMLNVDCDMYANEADVVRQAMCIFLQKSKNSNHCAFVQFPQEFYDSNTNELTVL 342

Query: 120 NEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLCLDQIEHQGNI---------VEDELLKKF 170
             Y+G+GI GIQGP Y G+G FH R V+YGL  D +E  G++          ED L ++F
Sbjct: 343 QSYLGRGIAGIQGPIYIGSGCFHTRRVMYGLSSDDLEDDGSLSSVATREFLAEDSLAREF 402

Query: 171 GNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAED 230
           GNSKE +KS    L+ K    +S ++ S++ A  V  C YEY +SWG+ +G LY + AED
Sbjct: 403 GNSKEMVKSVVDALQRKPNPQNS-LTNSIEAAQEVGHCHYEYQTSWGNTIGWLYDSVAED 461

Query: 231 NLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILAT 290
             T + IHS+GW S Y  P P AFLG   P GP  M QQ+RWATGL+E+LF+K++P++  
Sbjct: 462 LNTSIGIHSRGWTSSYISPDPPAFLGSMPPGGPEAMVQQRRWATGLIEVLFNKQSPLIGM 521

Query: 291 LIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFL 350
              K++FRQ LAYL++ T  LRSIPEL Y  LPAYC++ NS   PK     + I + L  
Sbjct: 522 FCRKIRFRQRLAYLYVFT-CLRSIPELIYCLLPAYCLLHNSALFPK--GVYLGIIVTLVG 578

Query: 351 IYKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQK 409
           ++ LYTL E++  G S++SW+V+    RI  TS+WLF + +  L+  G S+ VF +T+K
Sbjct: 579 MHCLYTLWEFMSLGFSVQSWYVSQSFWRIKATSSWLFSIQDIILKLLGISKTVFIVTKK 637

Length = 756
>gnl|CDD|217611 pfam03552, Cellulose_synt, Cellulose synthase Back     alignment and domain information
>gnl|CDD|215483 PLN02893, PLN02893, Cellulose synthase-like protein Back     alignment and domain information
>gnl|CDD|215121 PLN02189, PLN02189, cellulose synthase Back     alignment and domain information
>gnl|CDD|215239 PLN02436, PLN02436, cellulose synthase A Back     alignment and domain information
>gnl|CDD|215224 PLN02400, PLN02400, cellulose synthase Back     alignment and domain information
>gnl|CDD|215343 PLN02638, PLN02638, cellulose synthase A (UDP-forming), catalytic subunit Back     alignment and domain information
>gnl|CDD|215124 PLN02195, PLN02195, cellulose synthase A Back     alignment and domain information
>gnl|CDD|215138 PLN02248, PLN02248, cellulose synthase-like protein Back     alignment and domain information
>gnl|CDD|215494 PLN02915, PLN02915, cellulose synthase A [UDP-forming], catalytic subunit Back     alignment and domain information
>gnl|CDD|215494 PLN02915, PLN02915, cellulose synthase A [UDP-forming], catalytic subunit Back     alignment and domain information
>gnl|CDD|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>gnl|CDD|234095 TIGR03030, CelA, cellulose synthase catalytic subunit (UDP-forming) Back     alignment and domain information
>gnl|CDD|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>gnl|CDD|236918 PRK11498, bcsA, cellulose synthase catalytic subunit; Provisional Back     alignment and domain information
>gnl|CDD|224136 COG1215, COG1215, Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 417
PLN02436 1094 cellulose synthase A 100.0
PF03552 720 Cellulose_synt: Cellulose synthase; InterPro: IPR0 100.0
PLN02638 1079 cellulose synthase A (UDP-forming), catalytic subu 100.0
PLN02195 977 cellulose synthase A 100.0
PLN02400 1085 cellulose synthase 100.0
PLN02189 1040 cellulose synthase 100.0
PLN02190 756 cellulose synthase-like protein 100.0
PLN02915 1044 cellulose synthase A [UDP-forming], catalytic subu 100.0
PLN02248 1135 cellulose synthase-like protein 100.0
PLN02893734 Cellulose synthase-like protein 100.0
PRK11498 852 bcsA cellulose synthase catalytic subunit; Provisi 100.0
TIGR03030 713 CelA cellulose synthase catalytic subunit (UDP-for 100.0
PRK05454 691 glucosyltransferase MdoH; Provisional 100.0
PRK14583444 hmsR N-glycosyltransferase; Provisional 99.98
cd04191254 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elon 99.98
PRK11204420 N-glycosyltransferase; Provisional 99.97
COG1215439 Glycosyltransferases, probably involved in cell wa 99.95
TIGR03111439 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0 99.95
PRK14716504 bacteriophage N4 adsorption protein B; Provisional 99.95
cd06437232 CESA_CaSu_A2 Cellulose synthase catalytic subunit 99.91
PRK11234 727 nfrB bacteriophage N4 adsorption protein B; Provis 99.91
cd06435236 CESA_NdvC_like NdvC_like proteins in this family a 99.89
cd06421234 CESA_CelA_like CESA_CelA_like are involved in the 99.89
cd06427241 CESA_like_2 CESA_like_2 is a member of the cellulo 99.89
PF13641228 Glyco_tranf_2_3: Glycosyltransferase like family 2 99.87
PRK15489 703 nfrB bacteriophage N4 adsorption protein B; Provis 99.86
COG2943 736 MdoH Membrane glycosyltransferase [Cell envelope b 99.86
TIGR03472373 HpnI hopanoid biosynthesis associated glycosyl tra 99.83
cd04190244 Chitin_synth_C C-terminal domain of Chitin Synthas 99.83
PF13632193 Glyco_trans_2_3: Glycosyl transferase family group 99.81
cd04192229 GT_2_like_e Subfamily of Glycosyltransferase Famil 99.79
cd02520196 Glucosylceramide_synthase Glucosylceramide synthas 99.79
cd06434235 GT2_HAS Hyaluronan synthases catalyze polymerizati 99.78
cd06439251 CESA_like_1 CESA_like_1 is a member of the cellulo 99.71
TIGR03469384 HonB hopene-associated glycosyltransferase HpnB. T 99.63
cd02525249 Succinoglycan_BP_ExoA ExoA is involved in the bios 99.63
PF13506175 Glyco_transf_21: Glycosyl transferase family 21 99.62
cd06436191 GlcNAc-1-P_transferase N-acetyl-glucosamine transf 99.53
cd04184202 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot 99.3
cd06438183 EpsO_like EpsO protein participates in the methano 99.26
cd04195201 GT2_AmsE_like GT2_AmsE_like is involved in exopoly 99.23
cd02526237 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr 99.15
cd02510299 pp-GalNAc-T pp-GalNAc-T initiates the formation of 99.1
PF03142527 Chitin_synth_2: Chitin synthase; InterPro: IPR0048 99.09
cd06433202 GT_2_WfgS_like WfgS and WfeV are involved in O-ant 99.08
cd04186166 GT_2_like_c Subfamily of Glycosyltransferase Famil 99.05
TIGR01556281 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids 99.03
cd02522221 GT_2_like_a GT_2_like_a represents a glycosyltrans 98.99
cd06442224 DPM1_like DPM1_like represents putative enzymes si 98.98
cd04196214 GT_2_like_d Subfamily of Glycosyltransferase Famil 98.95
cd06420182 GT2_Chondriotin_Pol_N N-terminal domain of Chondro 98.94
cd04185202 GT_2_like_b Subfamily of Glycosyltransferase Famil 98.93
PLN02726243 dolichyl-phosphate beta-D-mannosyltransferase 98.86
KOG2571 862 consensus Chitin synthase/hyaluronan synthase (gly 98.79
cd06913219 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltran 98.77
cd06423180 CESA_like CESA_like is the cellulose synthase supe 98.72
PF10111281 Glyco_tranf_2_2: Glycosyltransferase like family 2 98.66
cd04188211 DPG_synthase DPG_synthase is involved in protein N 98.63
PF00535169 Glycos_transf_2: Glycosyl transferase family 2; In 98.6
PRK10073328 putative glycosyl transferase; Provisional 98.55
PRK10018279 putative glycosyl transferase; Provisional 98.49
COG1216305 Predicted glycosyltransferases [General function p 98.47
cd04187181 DPM1_like_bac Bacterial DPM1_like enzymes are rela 98.42
cd04179185 DPM_DPG-synthase_like DPM_DPG-synthase_like is a m 98.38
cd00761156 Glyco_tranf_GTA_type Glycosyltransferase family A 98.31
PRK10063248 putative glycosyl transferase; Provisional 98.24
PTZ00260333 dolichyl-phosphate beta-glucosyltransferase; Provi 97.86
KOG2547431 consensus Ceramide glucosyltransferase [Lipid tran 97.69
PRK10714325 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabi 97.66
PRK13915306 putative glucosyl-3-phosphoglycerate synthase; Pro 97.5
cd02511229 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 96.72
COG0463291 WcaA Glycosyltransferases involved in cell wall bi 95.09
KOG2978238 consensus Dolichol-phosphate mannosyltransferase [ 94.33
cd02514334 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an es 90.78
cd00899219 b4GalT Beta-4-Galactosyltransferase is involved in 90.18
PF13712217 Glyco_tranf_2_5: Glycosyltransferase like family; 89.72
KOG2977323 consensus Glycosyltransferase [General function pr 82.98
PF02364 817 Glucan_synthase: 1,3-beta-glucan synthase componen 82.22
>PLN02436 cellulose synthase A Back     alignment and domain information 
Probab=100.00  E-value=1.1e-96  Score=795.52  Aligned_cols=412  Identities=36%  Similarity=0.625  Sum_probs=378.8

Q ss_pred             CcccCCCCccCCCceEEEEEcCCCCC---CCCCCcEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCC
Q 014850            1 MTVFSNTERMNHPTIVKVISENKGGL---SDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMY   77 (417)
Q Consensus         1 ~~~~~~~~~~~~p~~~~v~~~~~~~~---~~~~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~~   77 (417)
                      +|.|++.+++|||+||||+++++++.   ++++|+|+|++|||||+++||+||||||+.+|+|+.++|++||++|||||+
T Consensus       499 gt~W~g~~~~dHp~IIqVll~~~~~~d~~g~~LP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaP~ILNLDCDmY  578 (1094)
T PLN02436        499 GTPWPGNNVRDHPGMIQVFLGHSGVRDVEGNELPRLVYVSREKRPGFDHHKKAGAMNSLIRVSAVLSNAPYLLNVDCDHY  578 (1094)
T ss_pred             CccCCCCCCCCCccceEEEecCCCCcccccccCceEEEEecccCCCCCcchhhhhhhhhhhhheeecCCceEEecccccc
Confidence            47899999999999999999998653   568999999999999999999999999999999999999999999999999


Q ss_pred             CCchHHHHHHHHHhhCCCCCCcEEEEeCCcccc-----Ccccc-hHHHHhHhhhhhhhcCCceecccCceeecccccccc
Q 014850           78 ANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFY-----DRPEN-LCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLC  151 (417)
Q Consensus        78 ~p~p~~L~~~v~~f~d~~~~~~vg~VQ~pq~f~-----d~~~~-~~~f~~~~~~g~~~~~~~~~~Gtg~~~Rr~al~~~~  151 (417)
                      +|+|+.++++|||||||+.++++||||+||+|+     |+|+| +++||++.++|.||+|||+|+||||+|||+||+|..
T Consensus       579 iNns~a~r~AMCfllD~~~g~~~afVQFPQrF~gi~k~D~Y~n~~~vffdi~~~GlDGlqGP~YvGTGC~frR~aLYG~~  658 (1094)
T PLN02436        579 INNSKALREAMCFMMDPQSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYD  658 (1094)
T ss_pred             cCchHHHHHhhhhhcCCccCCeeEEEcCCcccCCCCCCCcccccceEeeeccccccccCCCccccccCceeeeeeeeccC
Confidence            999999999999999999999999999999999     89999 999999999999999999999999999999999975


Q ss_pred             cchhhc------------------------------------------------------------ccchhHHHHHHhhC
Q 014850          152 LDQIEH------------------------------------------------------------QGNIVEDELLKKFG  171 (417)
Q Consensus       152 ~~~~~~------------------------------------------------------------~~~~~~~~~~~~~G  171 (417)
                      ++.-+.                                                            ...++.+.+.++||
T Consensus       659 pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~FG  738 (1094)
T PLN02436        659 APKKKKPPGKTCNCWPKWCCLCCGSRKKKKKKKSKEKKKKKNREASKQIHALENIEEGIEGSNNEKSSETPQLKLEKKFG  738 (1094)
T ss_pred             CccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhHHhhhc
Confidence            431000                                                            00134455678999


Q ss_pred             CcHHHHHHHHHhhcCCCCCCCCcccchHHHHhhhhccccccCCCccccccccCcccchhHHHHHHHHhCCCeEEEecCCC
Q 014850          172 NSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIP  251 (417)
Q Consensus       172 ~~~~~~~s~~~~l~g~~~~~~~~~~~~~~~~~~v~~~~y~~~~~w~~~~G~~~~~ltED~~~s~rl~~~Gwr~~y~~p~~  251 (417)
                      +|.+|++|+....++.+  .+...+.++++|++|++|+||++|+||+|+||.|+++|||+.||++||++|||++||+|++
T Consensus       739 ~S~~fi~S~~~~~~~~~--~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGwiYGSvTEDv~TG~rLH~rGWrSvY~~P~r  816 (1094)
T PLN02436        739 QSPVFVASTLLENGGVP--RNASPASLLREAIQVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKR  816 (1094)
T ss_pred             ccHHHHHHHHHhhcCCC--CCCCcHHHHHHHHHhhcCCCcccChhhHhhCeeccceecHHHHHHHHHcCCCceEeCCCCc
Confidence            99999999988764322  2445667899999999999999999999999999999999999999999999999999987


Q ss_pred             ceeecccCCChhHHHHHHHHHhhhhhHHHHhhcchhhhhhccCchHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCC
Q 014850          252 HAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNS  331 (417)
Q Consensus       252 ~~~~G~~P~tl~~~~~Qr~RWa~G~~qi~~~~~~p~~~~~~~~l~~~qrl~y~~~~~~~l~~~~~l~~~l~P~l~l~~g~  331 (417)
                      .++.|++|+|+.+++.||+|||.|++|+++++++|++.+..++|++.|||+|+.+++||+.+++.++|+++|+++|++|+
T Consensus       817 ~AF~GlAP~~L~d~L~Qr~RWA~G~lQIffsr~nPl~~g~~~~L~l~QRL~Yl~~~ly~l~Slp~liY~~lP~l~LL~G~  896 (1094)
T PLN02436        817 PAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERFSYINSVVYPWTSIPLIVYCTLPAICLLTGK  896 (1094)
T ss_pred             hhhcCcCCCCHHHHHHHHHHHhhcceeeeeccCCcchhcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            78899999999999999999999999999988999986444789999999999999999999999999999999999999


Q ss_pred             ccccccchhhHHHHHHHHHHHHHHHHHHHHHhCCchhhhHhhhhHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEeCcCCC
Q 014850          332 TFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQKIH  411 (417)
Q Consensus       332 ~~~p~~~~~~~~l~~~~f~~~~~~~ll~~~~~g~~~~~~w~~~~~w~i~~~~~~~~a~~~~ll~~l~~~~~~F~VTpK~~  411 (417)
                      +++|.++.+++++++.+|++++++.+++++|.|.++.+||++||+|+|..+++++++++++++|.|++++.+|.||+|..
T Consensus       897 ~i~P~vs~~~~~~fi~lfls~~~~~lLE~~wsG~si~~WWrnQq~w~I~~tSa~Lfavl~~iLKvLggs~~~F~VTsK~~  976 (1094)
T PLN02436        897 FIVPEISNYASILFMALFISIAATGILEMQWGGVGIDDWWRNEQFWVIGGVSSHLFALFQGLLKVLAGVNTNFTVTSKAA  976 (1094)
T ss_pred             eecCccchHHHHHHHHHHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcccceeccccc
Confidence            99999888888888999999999999999999999999999999999999999999999999999999999999999976


Q ss_pred             ccc
Q 014850          412 RSQ  414 (417)
Q Consensus       412 ~~~  414 (417)
                      .++
T Consensus       977 d~~  979 (1094)
T PLN02436        977 DDG  979 (1094)
T ss_pred             ccc
Confidence            643

>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals Back     alignment and domain information
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit Back     alignment and domain information
>PLN02195 cellulose synthase A Back     alignment and domain information
>PLN02400 cellulose synthase Back     alignment and domain information
>PLN02189 cellulose synthase Back     alignment and domain information
>PLN02190 cellulose synthase-like protein Back     alignment and domain information
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit Back     alignment and domain information
>PLN02248 cellulose synthase-like protein Back     alignment and domain information
>PLN02893 Cellulose synthase-like protein Back     alignment and domain information
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional Back     alignment and domain information
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming) Back     alignment and domain information
>PRK05454 glucosyltransferase MdoH; Provisional Back     alignment and domain information
>PRK14583 hmsR N-glycosyltransferase; Provisional Back     alignment and domain information
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan Back     alignment and domain information
>PRK11204 N-glycosyltransferase; Provisional Back     alignment and domain information
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111 Back     alignment and domain information
>PRK14716 bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex Back     alignment and domain information
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase Back     alignment and domain information
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily Back     alignment and domain information
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A Back     alignment and domain information
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI Back     alignment and domain information
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin Back     alignment and domain information
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2 Back     alignment and domain information
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis Back     alignment and domain information
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan Back     alignment and domain information
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily Back     alignment and domain information
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB Back     alignment and domain information
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan Back     alignment and domain information
>PF13506 Glyco_transf_21: Glycosyl transferase family 21 Back     alignment and domain information
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine Back     alignment and domain information
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis Back     alignment and domain information
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis Back     alignment and domain information
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis Back     alignment and domain information
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase Back     alignment and domain information
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans Back     alignment and domain information
>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2 Back     alignment and domain information
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis Back     alignment and domain information
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>TIGR01556 rhamnosyltran L-rhamnosyltransferase Back     alignment and domain information
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function Back     alignment and domain information
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1 Back     alignment and domain information
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase Back     alignment and domain information
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase Back     alignment and domain information
>KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine Back     alignment and domain information
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily Back     alignment and domain information
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ] Back     alignment and domain information
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation Back     alignment and domain information
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PRK10073 putative glycosyl transferase; Provisional Back     alignment and domain information
>PRK10018 putative glycosyl transferase; Provisional Back     alignment and domain information
>COG1216 Predicted glycosyltransferases [General function prediction only] Back     alignment and domain information
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1 Back     alignment and domain information
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily Back     alignment and domain information
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold Back     alignment and domain information
>PRK10063 putative glycosyl transferase; Provisional Back     alignment and domain information
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional Back     alignment and domain information
>KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional Back     alignment and domain information
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional Back     alignment and domain information
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide Back     alignment and domain information
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only] Back     alignment and domain information
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides Back     alignment and domain information
>cd00899 b4GalT Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids Back     alignment and domain information
>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B Back     alignment and domain information
>KOG2977 consensus Glycosyltransferase [General function prediction only] Back     alignment and domain information
>PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query417
4hg6_A 802 Structure Of A Cellulose Synthase - Cellulose Trans 3e-06
>pdb|4HG6|A Chain A, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate Length = 802 Back     alignment and structure 
Iteration: 1

 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 45/85 (52%), Gaps = 7/85 (8%)
Query: 218 DEVGCLYGAT-AEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQK-RWATG 275
           DE G   G T  ED  T L IHS+GW+S Y   I  A +    P   A   QQ+ RWATG
Sbjct: 330 DEAGGFAGETITEDAETALEIHSRGWKSLY---IDRAMIAGLQPETFASFIQQRGRWATG 386
Query: 276 LLEILFSKRNPILATLIGKLQFRQC 300
           ++++L  K NP+    +G  Q R C
Sbjct: 387 MMQMLLLK-NPLFRRGLGIAQ-RLC 409

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query417
4hg6_A 802 Cellulose synthase subunit A; membrane translocati 100.0
2z86_A 625 Chondroitin synthase; GT-A, glycosyltransferase A, 99.28
1xhb_A472 Polypeptide N-acetylgalactosaminyltransferase 1; g 99.27
1qg8_A255 Protein (spore coat polysaccharide biosynthesis P 99.26
2z86_A625 Chondroitin synthase; GT-A, glycosyltransferase A, 99.22
3bcv_A240 Putative glycosyltransferase protein; protein stru 99.19
2ffu_A501 Ppgalnact-2, polypeptide N-acetylgalactosaminyltra 99.11
2d7i_A570 Polypeptide N-acetylgalactosaminyltransferase 10; 99.1
4fix_A657 UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 98.77
3ckj_A329 Putative uncharacterized protein; mycobacteria, un 98.72
3l7i_A 729 Teichoic acid biosynthesis protein F; GT-B fold, m 98.5
2fy7_A287 Beta-1,4-galactosyltransferase 1; M339H mutant, AP 98.47
2nxv_A249 ATP synthase subunits region ORF 6; majastridin, A 98.07
3f1y_A387 Mannosyl-3-phosphoglycerate synthase; GT-A type gl 98.0
2bo4_A397 Mannosylglycerate synthase; catalysis, glycosyltra 96.67
2zu9_A394 Mannosyl-3-phosphoglycerate synthase; GT-A fold, g 86.36
1fo8_A343 Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetyl 80.38
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides} Back     alignment and structure
Probab=100.00  E-value=3.6e-34  Score=315.33  Aligned_cols=312  Identities=19%  Similarity=0.277  Sum_probs=231.8

Q ss_pred             CccCCCc---eEEEEEcCCCCCC--C--------------------CCCcEEEEEcCCCCCCCCCCchHHHHHHHHhcCC
Q 014850            8 ERMNHPT---IVKVISENKGGLS--D--------------------EIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGL   62 (417)
Q Consensus         8 ~~~~~p~---~~~v~~~~~~~~~--~--------------------~~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~   62 (417)
                      ..++||+   +|-|++|.++|..  .                    +..++.|+.|+++    +++|++|+|.|++    
T Consensus       164 ~~q~yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~~~~~v~~i~~~~~----~~GKa~alN~gl~----  235 (802)
T 4hg6_A          164 KNMIYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLCRELGVVYSTRERN----EHAKAGNMSAALE----  235 (802)
T ss_dssp             HTSSCCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHTCEEEECSSC----CSHHHHHHHHHHH----
T ss_pred             HhccCCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHHHHHhcCcEEEEecCC----CCcchHHHHHHHH----
Confidence            3578997   4556666565431  0                    2246899999887    3789999999999    


Q ss_pred             CCCCCEEEEecCCCCCCchHHHHHHHHHhhCCCCCCcEEEEeCCccccCc--c----------cc-hHHHHhHhhhhhhh
Q 014850           63 MTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDR--P----------EN-LCILNEYIGKGIVG  129 (417)
Q Consensus        63 ~~~~e~v~vlDaD~~~p~p~~L~~~v~~f~d~~~~~~vg~VQ~pq~f~d~--~----------~~-~~~f~~~~~~g~~~  129 (417)
                      .+++|||+++|||++ +.||+|++++.+|.   .||++++||+++.+.|+  .          .+ ...++.....+.+.
T Consensus       236 ~a~gd~Il~lDaD~~-~~pd~L~~lv~~~~---~dp~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (802)
T 4hg6_A          236 RLKGELVVVFDADHV-PSRDFLARTVGYFV---EDPDLFLVQTPHFFINPDPIQRNLALGDRCPPENEMFYGKIHRGLDR  311 (802)
T ss_dssp             HCCCSEEEECCTTEE-ECTTHHHHHHHHHH---HSSSCCEEECCCCBSSCCHHHHHHTCCTTSCCTTHHHHHTHHHHHHH
T ss_pred             hcCCCEEEEECCCCC-cChHHHHHHHHHHh---cCCCeEEEeccEEEeCCchHhhhhhHHhhhhHHHHHHHHHHHhhHhh
Confidence            479999999999997 58999999999995   57899999999998732  1          22 46688889999999


Q ss_pred             cCCceecccCceeecccccccccchhhcccchhHHHHHHhhCCcHHHHHHHHHhhcCCCCCCCCcccchHHHHhhhhccc
Q 014850          130 IQGPFYQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCG  209 (417)
Q Consensus       130 ~~~~~~~Gtg~~~Rr~al~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~s~~~~l~g~~~~~~~~~~~~~~~~~~v~~~~  209 (417)
                      +++++++|+++++||+++++                                                            
T Consensus       312 ~~~~~~~G~~~~~Rr~al~~------------------------------------------------------------  331 (802)
T 4hg6_A          312 WGGAFFCGSAAVLRRRALDE------------------------------------------------------------  331 (802)
T ss_dssp             TTCCCCCSSSEEEEHHHHHH------------------------------------------------------------
T ss_pred             cCCceecccchhhhHHHHHH------------------------------------------------------------
Confidence            99999999999999999842                                                            


Q ss_pred             cccCCCccccccccCcccchhHHHHHHHHhCCCeEEEecCCCceeecccCCChhHHHHHHHHHhhhhhHHHHhhcchhhh
Q 014850          210 YEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILA  289 (417)
Q Consensus       210 y~~~~~w~~~~G~~~~~ltED~~~s~rl~~~Gwr~~y~~p~~~~~~G~~P~tl~~~~~Qr~RWa~G~~qi~~~~~~p~~~  289 (417)
                               .|||++.+++||.+++.+++++||+++|+ |+ ....+++|+|++++++||.||++|.+|++++ ++|++.
T Consensus       332 ---------vGgf~~~~~~ED~~l~~rl~~~G~ri~~~-~~-~~~~~~~p~t~~~~~~Qr~RW~~G~~q~l~~-~~pl~~  399 (802)
T 4hg6_A          332 ---------AGGFAGETITEDAETALEIHSRGWKSLYI-DR-AMIAGLQPETFASFIQQRGRWATGMMQMLLL-KNPLFR  399 (802)
T ss_dssp             ---------HTTCCCSSSSHHHHHHHHHHTTTCCEEEC-CC-CCEEECCCCSHHHHHHHHHHHHHHHHHHHHH-SCTTSC
T ss_pred             ---------cCCcCCCCcchHHHHHHHHHHcCCeEEEe-cC-CEEEecCCCCHHHHHHHHHHHHccHHHHHHH-hCcccc
Confidence                     15888899999999999999999999996 55 4557899999999999999999999999975 677776


Q ss_pred             hhccCchHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCccccccchhhHHHHHHHHHHHHHHHHHH-HHHhCCchh
Q 014850          290 TLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLE-YIQAGLSIR  368 (417)
Q Consensus       290 ~~~~~l~~~qrl~y~~~~~~~l~~~~~l~~~l~P~l~l~~g~~~~p~~~~~~~~l~~~~f~~~~~~~ll~-~~~~g~~~~  368 (417)
                         +++++.+|+.|+..+.+++.+++.++++++|+++++++..+++. ....++.+++   ++.+..++. ....+....
T Consensus       400 ---~~l~~~~rl~~l~~~~~~~~~~~~li~ll~p~~~ll~~~~~~~~-~~~~~~~~~l---p~~l~~~~~~~~~~~~~r~  472 (802)
T 4hg6_A          400 ---RGLGIAQRLCYLNSMSFWFFPLVRMMFLVAPLIYLFFGIEIFVA-TFEEVLAYMP---GYLAVSFLVQNALFARQRW  472 (802)
T ss_dssp             ---SSCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHCCCCSCC-CHHHHHHHHH---HHHHHHHHHHHHHHTTTSC
T ss_pred             ---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhc-CHHHHHHHHH---HHHHHHHHHHHHHhcCcHH
Confidence               78999999999999888888888899999999999999765543 2222222222   222222111 112232222


Q ss_pred             hhHhhhhHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEeCcCCCcccc
Q 014850          369 SWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQKIHRSQR  415 (417)
Q Consensus       369 ~~w~~~~~w~i~~~~~~~~a~~~~ll~~l~~~~~~F~VTpK~~~~~~  415 (417)
                      .||. ..+..+    ..++.+...+...+++++.+|+||+|+...++
T Consensus       473 ~~~~-~l~~~~----~~~~~~~a~l~~l~~~~~~~f~VT~Kg~~~~~  514 (802)
T 4hg6_A          473 PLVS-EVYEVA----QAPYLARAIVTTLLRPRSARFAVTAKDETLSE  514 (802)
T ss_dssp             TTHH-HHHHHH----HHHHHHHHHHHHHHSTTCCCCCCCCCCCCCSS
T ss_pred             HHHH-HHHHHH----HHHHHHHHHHHHHhCCCCCcceECCCCccccc
Confidence            3332 212211    11222222233346678899999999987654
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Back     alignment and structure
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 Back     alignment and structure
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A* Back     alignment and structure
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Back     alignment and structure
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis} Back     alignment and structure
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* Back     alignment and structure
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* Back     alignment and structure
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A* Back     alignment and structure
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A Back     alignment and structure
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* Back     alignment and structure
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ... Back     alignment and structure
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A* Back     alignment and structure
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A* Back     alignment and structure
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A* Back     alignment and structure
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A* Back     alignment and structure
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query417
d1xhba2328 Polypeptide N-acetylgalactosaminyltransferase 1, N 99.24
d1qg8a_255 Spore coat polysaccharide biosynthesis protein Sps 98.63
d1omza_265 Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-Ga 98.55
d2bo4a1381 Mannosylglycerate synthase, MGS {Rhodothermus mari 94.83
>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.24  E-value=1.7e-11  Score=117.46  Aligned_cols=74  Identities=7%  Similarity=-0.078  Sum_probs=59.2

Q ss_pred             cCCCc---eEEEEEcCCCCC----------CCCCCcEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCC
Q 014850           10 MNHPT---IVKVISENKGGL----------SDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDM   76 (417)
Q Consensus        10 ~~~p~---~~~v~~~~~~~~----------~~~~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~   76 (417)
                      +.+|.   +|-|++|.|++.          ....+.+++++.++|     .++++|.|.|++    .++||||+.+|+|.
T Consensus        48 qt~~~~~~EIIvVDdgS~d~~~~~~l~~~~~~~~~~i~vi~~~~n-----~G~~~a~N~Gi~----~a~gd~i~flD~D~  118 (328)
T d1xhba2          48 RSPRHMIEEIVLVDDASERDFLKRPLESYVKKLKVPVHVIRMEQR-----SGLIRARLKGAA----VSRGQVITFLDAHC  118 (328)
T ss_dssp             SSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSSSSCEEEEECSSC-----CCHHHHHHHHHH----HCCSSEEEEEESSE
T ss_pred             cCCCCCCeEEEEEECCCChhhHHHHHHHHHHhcCCCeEEEEeccc-----ccchHHHHHHHH----hhhcceeeecCccc
Confidence            45555   577778777764          122457888888777     479999999999    58999999999999


Q ss_pred             CCCchHHHHHHHHHhhC
Q 014850           77 YANNPEIVLQAMCLHLG   93 (417)
Q Consensus        77 ~~p~p~~L~~~v~~f~d   93 (417)
                      ++ .|++|..++..|.+
T Consensus       119 ~~-~p~~l~~l~~~~~~  134 (328)
T d1xhba2         119 EC-TAGWLEPLLARIKH  134 (328)
T ss_dssp             EE-CTTCHHHHHHHHHH
T ss_pred             cc-ChhHHHHHHHHHhc
Confidence            74 89999999999963
>d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]} Back     information, alignment and structure