Citrus Sinensis ID: 014855

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------
Protein Sequence
MKMMKGLLVEENMSNLTSASGEVTASSGSRVETGTNFYAQHSFSSTNEATPPSKKKRSLPGNPDPDAEVIALSPKSLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKICGTREYKCDCGKLFSRRDSFITHRAFCDVLAEESARTITVNPLFSPSQQQPNSSATHMLNFPSHHHHQLQSQGLQALQLQAVKIEDNNQQHHIPPWLACPSSIDLSSQLFSGNIFSRSLLHNENQSASPSPNPNSTSFAPFEPPGTTGSQHTSATALLQKAAQMGATMSTQPSALPAPVLRVPVPHQTHHMPAGSASTAGAAGSSSGLGLSSREDLAICCKYYNYYNRPWDSSISSA
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccEEccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccEEEEEcHHHHHHcccEEEHHcccccccHHHHHHHccccccccEEEEccccccEEEEEEccccccccccHHHHHHcHHHHHHHHHccccccEEEEccccccEEEEccHHHHHcccccccEEcccccEEcccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccEEcccccEEEccccccccccc
Coil and Loop (DISEMBL)
MKMMKGLLVEENMSnltsasgevtassgsrvetgtnfyaqhsfsstneatppskkkrslpgnpdpdaevialspkslMATNRFLCEICNkgfqrdqnlqlhrrghnlpwklkqrtnkverkkvyvcpeptcvhhdpsralgdltgikkhfsrkhgekkwkcekcskkyavQSDWKAhskicgtreykcdcgklfsrrdsfiTHRAFCDVLAEESartitvnplfspsqqqpnssathmlnfpshhhhqlqSQGLQALQLQAVkiednnqqhhippwlacpssidlssqlfsgnifsrsllhnenqsaspspnpnstsfapfeppgttgsqhtSATALLQKAAQMGatmstqpsalpapvlrvpvphqthhmpagsastagaagsssglglssreDLAICCKyynyynrpwdssissa
Flexible Loop (DISEMBL)
MKMMKGLLVEENMSNLTSASGEVTASSGSRVETGTNFYAqhsfsstneatppskkkrslpgnpdPDAEVIALSPKSLMATNRFLCEICNKGFQRDQnlqlhrrghnlpwklkqrtnkverkkvyvcpeptcvhhdpsralgdlTGIKKHfsrkhgekkwkcekcskkyavqsdwkahskicgtreykcdCGKLFSRRDSFITHRAFCDVLAEESARTITVNPLFSPSQQQPNSSATHMLNFPSHHHHQLQSQGLQALQLQAVKIEDNNQQHHIPPWLACPSSIDLSSQLFSGNIFSRSLLHNENQSASPSPNPNSTSFAPFEPPGTTGSQHTSATALLQKAAQMGATMSTQPSALPAPVLRVPVPHQTHHMPAGSASTAGAAGSSSGLGLSSREDLAICCKYYNyynrpwdssissa
Low Complexity Region (SEG)
MKMMKGLLVEENMSNLTSASGEVTASSGSRVETGTNFYAQHSFSSTNEATPPSKKKRSLPGNPDPDAEVIALSPKSLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGekkwkcekcskkYAVQSDWKAHSKICGTREYKCDCGKLFSRRDSFITHRAFCDVLAEESARTITVNPLFSPSQQQPNSSATHMLNFPshhhhqlqsqglqalqlqaVKIEDNNQQHHIPPWLACPSSIDLSSQLFSGNIFSRSLLHNENQsaspspnpnstsfapfEPPGTTGSQHTSATALLQKAAQMGATMSTQpsalpapvlrvpvpHQTHHMPagsastagaagsssglglssREDLAICCKYYNYYNRPWDSSISSA
Disordered region (IsUnstruct)
**************************************************************************KSLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKICGTREYKCDCGKLFSRRDSFITHRAFCDVLAEESARTITVN*************************************************HHIPPWLACPSSIDLSSQLFSGNIF***************************************************************************************************DLAICCKYYNYYN**********
Disordered Region (DISOPRED)
****KG*****************************************************PGNPDPDAEVIALSPKSLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKICGTREYKCDCGKLFSRRDSFITHRAFCDVLAEESARTITVNP**************************************************************************************************************************************************************************************YYNRPW*******
Disordered Region (DISEMBL)
MKMMKGLLVEENMSNLT************RVETGTNFYAQHSF*******************PDPDAEVIALSPKSLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKK*************EKCSKKYAVQSDWKAHSKICGTREYKCDCGKLFSRRDSFITHRAFCDVLAEESARTITVNPLFS*********ATHMLNFP***********LQALQLQAVKIEDNNQQHHIPPWLACPSSIDLSSQLFSGNIFSRSLLHN*************TSFAPFE***********ATALLQKAAQMGATMSTQPSALPAPVLRVPVPHQT**********************SSREDLAICCKYYNYYNRPWDSSISSA
Disordered Region (DISPRO)
***********************************************************PGNPDPDAEVIALSPKSLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKICGTREYKCDCGKLFSRRDSFITHRAFCDVLAEESAR*****************************************************QHHIPPWLACPSSIDLSSQL****************************************************AQMG***************R****************************LSSREDLAICCKYYNYYNRPW*******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKMMKGLLVEENMSNLTSASGEVTASSGSRVETGTNFYAQHSFSSTNEATPPSKKKRSLPGNPDPDAEVIALSPKSLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKICGTREYKCDCGKLFSRRDSFITHRAFCDVLAEESARTITVNPLFSPSQQQPNSSATHMLNFPSHHHHQLQSQGLQALQLQAVKIEDNNQQHHIPPWLACPSSIDLSSQLFSGNIFSRSLLHNENQSASPSPNPNSTSFAPFEPPGTTGSQHTSATALLQKAAQMGATMSTQPSALPAPVLRVPVPHQTHHMPAGSASTAGAAGSSSGLGLSSREDLAICCKYYNYYNRPWDSSISSA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	417	2.2.26 [Sep-21-2011]
Q9ZWA6	506	Zinc finger protein MAGPI	no	no	0.398	0.328	0.861	1e-88
Q9FFH3	466	Zinc finger protein NUTCR	no	no	0.908	0.813	0.444	4e-86
Q700D2	503	Zinc finger protein JACKD	no	no	0.414	0.343	0.802	4e-85
Q9C8N5	499	Protein SENSITIVE TO PROT	no	no	0.333	0.278	0.333	8e-20
Q943I6	522	Zinc finger protein STOP1	no	no	0.330	0.264	0.34	2e-19
Q2QX40	465	Zinc finger protein STAR3	no	no	0.330	0.296	0.320	2e-17
Q8VWG3	303	Protein TRANSPARENT TESTA	no	no	0.376	0.518	0.329	7e-14
O43313	823	ATM interactor OS=Homo sa	yes	no	0.340	0.172	0.313	3e-11
Q6P9S1	818	ATM interactor OS=Mus mus	yes	no	0.285	0.145	0.307	2e-10
Q8BXX2	756	Zinc finger and BTB domai	no	no	0.311	0.171	0.280	2e-08

>sp|Q9ZWA6|MGP_ARATH Zinc finger protein MAGPIE OS=Arabidopsis thaliana GN=MGP PE=1 SV=1

 Score =  327 bits (837), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 143/166 (86%), Positives = 155/166 (93%)

Query: 51  PPSKKKRSLPGNPDPDAEVIALSPKSLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWK 110
           P  KKKR+LPGNPDP+AEVIALSPK+LMATNRFLCEIC KGFQRDQNLQLHRRGHNLPWK
Sbjct: 38  PLVKKKRNLPGNPDPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWK 97

Query: 111 LKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAV 170
           LKQRT+K  RK+VYVCPE +CVHH P+RALGDLTGIKKHF RKHGEKKWKCEKC+K+YAV
Sbjct: 98  LKQRTSKEVRKRVYVCPEKSCVHHHPTRALGDLTGIKKHFCRKHGEKKWKCEKCAKRYAV 157

Query: 171 QSDWKAHSKICGTREYKCDCGKLFSRRDSFITHRAFCDVLAEESAR 216
           QSDWKAHSK CGTREY+CDCG +FSRRDSFITHRAFCD LAEE+AR
Sbjct: 158 QSDWKAHSKTCGTREYRCDCGTIFSRRDSFITHRAFCDALAEETAR 203

Probable transcription factor that regulates tissue boundaries and asymmetric cell division. Might be involved in the sequestration of 'SHORT-ROOT' to the nucleus.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9FFH3|NUC_ARATH Zinc finger protein NUTCRACKER OS=Arabidopsis thaliana GN=NUC PE=2 SV=1

 Score =  318 bits (815), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 201/452 (44%), Positives = 246/452 (54%), Gaps = 73/452 (16%)

Query: 8   LVEENMSNLTSASGEVTASSGSRVETGTNFYAQHSFSSTNEATPPSKKKRSLPGNPDPDA 67
           +  E +  ++S SG     S S ++        H  S  N   P  KKKR+LPGNPDP+A
Sbjct: 1   MTSEVLQTISSGSGFAQPQSSSTLD--------HDESLINP--PLVKKKRNLPGNPDPEA 50

Query: 68  EVIALSPKSLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCP 127
           EVIALSP +LMATNRFLCE+C KGFQRDQNLQLHRRGHNLPWKLKQRT+K  RK+VYVCP
Sbjct: 51  EVIALSPTTLMATNRFLCEVCGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCP 110

Query: 128 EPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKICGTREYK 187
           E TCVHH  SRALGDLTGIKKHF RKHGEKKW CEKC+K+YAVQSDWKAHSK CGTREY+
Sbjct: 111 EKTCVHHHSSRALGDLTGIKKHFCRKHGEKKWTCEKCAKRYAVQSDWKAHSKTCGTREYR 170

Query: 188 CDCGKLFSRRDSFITHRAFCDVLAEESARTITVN-------------------------- 221
           CDCG +FSRRDSFITHRAFCD LAEE+A+   V+                          
Sbjct: 171 CDCGTIFSRRDSFITHRAFCDALAEETAKINAVSHLNGLAAAGAPGSVNLNYQYLMGTFI 230

Query: 222 PLFSPSQQQPNSSATHMLNFPSHHHHQLQSQGLQALQLQAVKIEDNNQQHHIPPWL---- 277
           P   P   QP ++       P+HHH   Q     +L L   +     Q      W+    
Sbjct: 231 PPLQPFVPQPQTN-------PNHHHQHFQPPTSSSLSLWMGQDIAPPQPQPDYDWVFGNA 283

Query: 278 -ACPSSIDLSSQLFSGNIFSRSLLHNENQSASPSPNPNSTSFAPFEPPGTTGSQ---HTS 333
            A  + ID      + N     +  N N S + +   ++ S    + P    +    + S
Sbjct: 284 KAASACID------NNNTHDEQITQNANASLTTTTTLSAPSLFSSDQPQNANANSNVNMS 337

Query: 334 ATALLQKAAQMGATMSTQPSALPAPVLRVPVP----HQTHHMPAGSASTAGAAGSSSGLG 389
           ATALLQKAA++GAT +T  +           P     QT    +G    A   GS++ +G
Sbjct: 338 ATALLQKAAEIGATSTTTAATNDPSTFLQSFPLKSTDQTTSYDSGEKFFA-LFGSNNNIG 396

Query: 390 LSS-----------REDLAICCKYYNYYNRPW 410
           L S           R D+ +        N PW
Sbjct: 397 LMSRSHDHQEIENARNDVTVASALDELQNYPW 428

Putative transcription factor.

Arabidopsis thaliana (taxid: 3702)

>sp|Q700D2|JKD_ARATH Zinc finger protein JACKDAW OS=Arabidopsis thaliana GN=JKD PE=1 SV=1

 Score =  315 bits (807), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 142/177 (80%), Positives = 157/177 (88%), Gaps = 4/177 (2%)

Query: 53  SKKKRSLPGNPDPDAEVIALSPKSLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLK 112
           +KKKR+ PG PDPDA+VIALSP +LMATNRF+CEICNKGFQRDQNLQLHRRGHNLPWKLK
Sbjct: 52  AKKKRNQPGTPDPDADVIALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLK 111

Query: 113 QRTNK-VERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQ 171
           QR+ + V +KKVY+CP  TCVHHD SRALGDLTGIKKH+SRKHGEKKWKCEKCSKKYAVQ
Sbjct: 112 QRSKQEVIKKKVYICPIKTCVHHDASRALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQ 171

Query: 172 SDWKAHSKICGTREYKCDCGKLFSRRDSFITHRAFCDVLAEESARTITV---NPLFS 225
           SDWKAH+K CGTREYKCDCG LFSR+DSFITHRAFCD L EE AR  ++   NP+ S
Sbjct: 172 SDWKAHAKTCGTREYKCDCGTLFSRKDSFITHRAFCDALTEEGARMSSLSNNNPVIS 228

Probable transcription factor that regulates tissue boundaries and asymmetric cell division by a rapid up-regulation of 'SCARECROW' (SCR), thus controlling the nuclear localization of 'SHORT-ROOT' (SHR) and restricting its action. Required for radial patterning and stem cell maintenance. Counteracted by 'MAGPIE' (MGP).

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C8N5|STOP1_ARATH Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 OS=Arabidopsis thaliana GN=STOP1 PE=2 SV=1

 Score = 98.6 bits (244), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 77/153 (50%), Gaps = 14/153 (9%)

Query: 68  EVIALSPKSLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKV---- 123
           E++ L  + ++A +   C IC KGF+RD NL++H RGH   +K      K  ++ V    
Sbjct: 229 EILQLEKEEILAPHTHFCTICGKGFKRDANLRMHMRGHGDEYKTAAALAKPNKESVPGSE 288

Query: 124 ------YVCPEPTC---VHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKC-SKKYAVQSD 173
                 Y CP   C     H   + L  +  +K H+ R H +K + C +C +KK++V +D
Sbjct: 289 PMLIKRYSCPFLGCKRNKEHKKFQPLKTILCVKNHYKRTHCDKSFTCSRCHTKKFSVIAD 348

Query: 174 WKAHSKICGTREYKCDCGKLFSRRDSFITHRAF 206
            K H K CG  ++ C CG  FSR+D    H A 
Sbjct: 349 LKTHEKHCGKNKWLCSCGTTFSRKDKLFGHIAL 381

Probable transcription factor. Plays a critical role in tolerance to major stress factors in acid soils such as proton H(+) and aluminum ion Al(3+). Required for the expression of genes in response to acidic stress (e.g. ALMT1 and MATE), and Al-activated citrate exudation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q943I6|STOP1_ORYSJ Zinc finger protein STOP1 homolog OS=Oryza sativa subsp. japonica GN=Os01g0871200 PE=2 SV=1

 Score = 97.1 bits (240), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 51/150 (34%), Positives = 77/150 (51%), Gaps = 12/150 (8%)

Query: 69  VIALSPKSLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLK------QRTNKVERKK 122
           V+ L  + ++A +   C IC KGF+RD NL++H RGH   +K         + + +E   
Sbjct: 268 VLQLEKEEILAPHTHFCLICGKGFKRDANLRMHMRGHGDEYKTAAALAKPSKDSSLESAP 327

Query: 123 V--YVCPEPTC---VHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKC-SKKYAVQSDWKA 176
           V  Y CP   C     H   + L  +  +K H+ R H +K + C +C +KK++V +D K 
Sbjct: 328 VTRYSCPYVGCKRNKEHKKFQPLKTILCVKNHYKRSHCDKSYTCSRCNTKKFSVIADLKT 387

Query: 177 HSKICGTREYKCDCGKLFSRRDSFITHRAF 206
           H K CG  ++ C CG  FSR+D    H A 
Sbjct: 388 HEKHCGRDKWLCSCGTTFSRKDKLFGHVAL 417

Probable transcription factor that may be involved in aluminum tolerance.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q2QX40|ART1_ORYSJ Zinc finger protein STAR3 OS=Oryza sativa subsp. japonica GN=STAR3 PE=2 SV=1

 Score = 90.9 bits (224), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 74/153 (48%), Gaps = 15/153 (9%)

Query: 69  VIALSPKSLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWK-----------LKQRTNK 117
           V+ L    ++A +   C IC KGF+RD NL++H RGH   +K            +     
Sbjct: 215 VLQLEEDEILAPHTHFCGICGKGFKRDANLRMHMRGHGDEYKSAAALAKPPPPPEGEEQP 274

Query: 118 VERKKVYVCPEPTCVH---HDPSRALGDLTGIKKHFSRKHGEKKWKCEKC-SKKYAVQSD 173
            + ++ Y CP   C     H   + L  +  +K H+ R H EK+  C +C +K+++V +D
Sbjct: 275 PQPERRYSCPHAGCKRNRMHASFQPLKTILCVKNHYKRSHCEKRHVCGRCGAKRFSVMAD 334

Query: 174 WKAHSKICGTREYKCDCGKLFSRRDSFITHRAF 206
            K H K CG   + C CG  FSR+D    H A 
Sbjct: 335 LKTHEKHCGRDRWLCSCGTSFSRKDKLFAHVAL 367

Transcriptional activator that regulates the expression of genes involved in aluminum (Al) tolerance. Binds to the promoter of STAR1 and regulates transcript expression of STAR1 STAR2 and ART1 required for Al tolerance.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q8VWG3|TT1_ARATH Protein TRANSPARENT TESTA 1 OS=Arabidopsis thaliana GN=TT1 PE=2 SV=1

 Score = 79.0 bits (193), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 57/173 (32%), Positives = 76/173 (43%), Gaps = 16/173 (9%)

Query: 77  LMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKV------YVCPEPT 130
           L+    F C +C K F R  NLQ+H  GH   ++    + K  + +       Y C E  
Sbjct: 139 LIGFTHFSCHVCFKTFNRYNNLQMHMWGHGSQYRKGPESLKGTQPRAMLGIPCYCCVEGC 198

Query: 131 CVH--HDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKICGTREYKC 188
             H  H  S+ L D   ++ H+ RKHG K + C  C K  AV+ DW+ H K CG R + C
Sbjct: 199 RNHIDHPRSKPLKDFRTLQTHYKRKHGHKPFSCRLCGKLLAVKGDWRTHEKNCGKR-WVC 257

Query: 189 DCGKLFSRRDSFITHRAFCDVLAEESARTITVNPLFSPSQQQPNSSATHMLNF 241
            CG  F  + S   H     V A  S        LF   +Q  NSS +  L F
Sbjct: 258 VCGSDFKHKRSLKDH-----VKAFGSGHGPYPTGLF--EEQASNSSVSETLFF 303

May act as a transcriptional regulator involved in the differentiation of young endothelium. Altered differentiation results in incompetence for pigments synthesis and the lack of condensed tannins in the seed coat.

Arabidopsis thaliana (taxid: 3702)

>sp|O43313|ATMIN_HUMAN ATM interactor OS=Homo sapiens GN=ATMIN PE=1 SV=2

 Score = 70.1 bits (170), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 71/153 (46%), Gaps = 11/153 (7%)

Query: 60  PGNPDPDA-EVI--ALSPKSLMATNRFLCEI--CNKGFQRDQNLQLHR-RGHNLPWKLKQ 113
           P  P P A E+I  ++S  S       LC +  C K       L +H  + H L   +  
Sbjct: 58  PAVPAPPAGELIQPSVSELSRAVRTNILCTVRGCGKILPNSPALNMHLVKSHRLQDGIVN 117

Query: 114 RTNKVERK---KVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAV 170
            T + + K   K Y CP   C    P R     + +K+HF + H EKK KC KCS  Y  
Sbjct: 118 PTIRKDLKTGPKFYCCPIEGC-PRGPERPFSQFSLVKQHFMKMHAEKKHKCSKCSNSYGT 176

Query: 171 QSDWKAHSKICGTREYKCDCGKLFSRRDSFITH 203
           + D K H++ CG + ++C CG  ++ R +  +H
Sbjct: 177 EWDLKRHAEDCG-KTFRCTCGCPYASRTALQSH 208

Plays a crucial role in cell survival and RAD51 foci formation in response to methylating DNA damage. Involved in regulating the activity of ATM in the absence of DNA damage. May play a role in stabilizing ATM.

Homo sapiens (taxid: 9606)

>sp|Q6P9S1|ATMIN_MOUSE ATM interactor OS=Mus musculus GN=Atmin PE=2 SV=2

 Score = 67.0 bits (162), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 57/127 (44%), Gaps = 8/127 (6%)

Query: 83  FLCEI--CNKGFQRDQNLQLHR-RGHNLPWKLKQ---RTNKVERKKVYVCPEPTCVHHDP 136
            LC +  C K       L +H  + H L   +     R +     K Y CP   C    P
Sbjct: 80  ILCTVRGCGKILPNSPALNMHLVKSHRLQDGIVNPTIRKDLTTAPKFYCCPIKGC-PRGP 138

Query: 137 SRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKICGTREYKCDCGKLFSR 196
            R     + +K+HF + H EKK KC KCS  Y  + D K H + CG + ++C CG  ++ 
Sbjct: 139 DRPFSQFSLVKQHFMKMHAEKKHKCSKCSNSYGTEWDLKRHEEDCG-KTFQCTCGCPYAS 197

Query: 197 RDSFITH 203
           R +  +H
Sbjct: 198 RTALQSH 204

Plays a crucial role in cell survival and RAD51 foci formation in response to methylating DNA damage. Involved in regulating the activity of ATM in the absence of DNA damage. May play a role in stabilizing ATM.

Mus musculus (taxid: 10090)

>sp|Q8BXX2|ZBT49_MOUSE Zinc finger and BTB domain-containing protein 49 OS=Mus musculus GN=Zbtb49 PE=2 SV=1

 Score = 60.8 bits (146), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 69/164 (42%), Gaps = 34/164 (20%)

Query: 47  NEATPPSKKKRSLPGNP----DPDAEVIALSPKSLMATNRFLCEICNKGFQRDQNLQLHR 102
            E  P S ++  LPG P    DP         ++L    ++ CE+C K F+   NL+LH+
Sbjct: 354 GELGPESSREEELPGAPASWEDPS--------QALQPQKQYACELCGKPFKHPSNLELHK 405

Query: 103 RGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCE 162
           R H               +K + C    C  H           ++ H  R  GEK + CE
Sbjct: 406 RSHT-------------GEKPFEC--NICGKH-----FSQAGNLQTHLRRHSGEKPYICE 445

Query: 163 KCSKKYAVQSDWKAHSKI-CGTREYKCD-CGKLFSRRDSFITHR 204
            C K++A   D + H  I  G + + CD CG+ FS   +   H+
Sbjct: 446 ICGKRFAASGDVQRHIIIHSGEKPHLCDTCGRGFSNFSNLKEHK 489

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	417
224088818	444	predicted protein [Populus trichocarpa]	0.803	0.754	0.637	1e-121
359475946	509	PREDICTED: zinc finger protein NUTCRACKE	0.832	0.681	0.629	1e-117
255572931	552	nucleic acid binding protein, putative [	0.832	0.628	0.616	1e-113
87162706	480	Zinc finger, C2H2-type [Medicago truncat	0.856	0.743	0.585	1e-111
357454633	545	Zinc finger protein [Medicago truncatula	0.856	0.655	0.585	1e-111
302398661	539	C2H2L domain class transcription factor	0.798	0.617	0.650	1e-111
357513641	517	Zinc finger protein [Medicago truncatula	0.812	0.655	0.609	1e-110
147854387	532	hypothetical protein VITISV_006257 [Viti	0.872	0.684	0.568	1e-109
356522186	498	PREDICTED: zinc finger protein NUTCRACKE	0.815	0.682	0.619	1e-108
302398675	523	C2H2L domain class transcription factor	0.786	0.627	0.648	1e-108

>gi|224088818|ref|XP_002308553.1| predicted protein [Populus trichocarpa] gi|222854529|gb|EEE92076.1| predicted protein [Populus trichocarpa]

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 251/394 (63%), Positives = 280/394 (71%), Gaps = 59/394 (14%)

Query: 9   VEENMSNLTSASGEVTASSGSRVETGTNFYAQHSFSSTNEATPPSKKKRSLPGNPDPDAE 68
           ++ENMSNLTSASGEV+ASSGSR+ETG   + QHSF STN+     KKK++LPGNPDPDAE
Sbjct: 1   MDENMSNLTSASGEVSASSGSRIETGAK-HPQHSFDSTNQPP--PKKKKNLPGNPDPDAE 57

Query: 69  VIALSPKSLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPE 128
           VIALSP SL  TNRFLCEICNKGF+RDQNLQLHRRGHNLPWKLKQRTNK  RKKVYVCPE
Sbjct: 58  VIALSPNSLQTTNRFLCEICNKGFKRDQNLQLHRRGHNLPWKLKQRTNKEVRKKVYVCPE 117

Query: 129 PTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKICGTREYKC 188
            TCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSK+YAVQSDWKAHSKICGTREY+C
Sbjct: 118 VTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKRYAVQSDWKAHSKICGTREYRC 177

Query: 189 DCGKLFSRRDSFITHRAFCDVLAEESARTITVNPLFSPSQQQPNSSATHMLNFPSHHHHQ 248
           DCG LFSRRDSFITHRAFCD LAEESAR++TV      S QQP SSA+H++N        
Sbjct: 178 DCGTLFSRRDSFITHRAFCDTLAEESARSMTV-----LSSQQPGSSASHLMN-------- 224

Query: 249 LQSQGLQALQLQAVKIEDNNQQH-------HIPPWLACPSSIDLSSQLFSGNIFSRSLLH 301
                LQAL   +VK E +  Q+        IPPWLACP   +            +S L 
Sbjct: 225 -----LQAL---SVKREQDQNQYLFNPRPDSIPPWLACPPIGEAGPD--------QSFL- 267

Query: 302 NENQSASPSPNPNSTSFAPFEPPGTTGSQHTSATALLQKAAQMGATMST-QPSALPAPVL 360
              Q  +PSPNP  T   PF+ P +T S H SATALLQKAAQMG T+S   PS   A +L
Sbjct: 268 ---QHGNPSPNP--TVLPPFQ-PSSTASPHMSATALLQKAAQMGVTVSKPSPSPATAAIL 321

Query: 361 RVPVPHQ---------THHMPAGSASTAGAAGSS 385
           R   PHQ          H M +  +S +G  GSS
Sbjct: 322 R---PHQGHMSDHQNPVHDMMSSLSSASGFDGSS 352

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359475946|ref|XP_002278933.2| PREDICTED: zinc finger protein NUTCRACKER-like [Vitis vinifera]

 Score =  427 bits (1098), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 262/416 (62%), Positives = 294/416 (70%), Gaps = 69/416 (16%)

Query: 3   MMKGLLVEENMSNLTSASGEVTASSGSRVETGTNFYAQHSFSSTNEATPPSKKKRSLPGN 62
           M+KGL+V+ENMSNLTSASGE +ASS                   N+A   +KKKRSLPGN
Sbjct: 1   MLKGLMVDENMSNLTSASGEASASS------------------ANQAPAAAKKKRSLPGN 42

Query: 63  PDPDAEVIALSPKSLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKK 122
           PDP+AEV+ALSPK+L ATNRF+CEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNK  RKK
Sbjct: 43  PDPNAEVVALSPKTLQATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKEVRKK 102

Query: 123 VYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKICG 182
           VYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSK+YAVQSDWKAHSKICG
Sbjct: 103 VYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKRYAVQSDWKAHSKICG 162

Query: 183 TREYKCDCGKLFSRRDSFITHRAFCDVLAEESARTITVNPLFSPSQQQPNSSATHMLNFP 242
           TREY+CDCG LFSRRDSFITHRAFCD LAEESAR IT NPL S       SS++H+   P
Sbjct: 163 TREYRCDCGTLFSRRDSFITHRAFCDALAEESARAITGNPLLSSQPG---SSSSHLNLQP 219

Query: 243 SHHHHQLQSQGLQALQLQAVKIEDNNQQHH-------IPPWLAC---------PSSIDLS 286
                QL S GLQA+    + ++   +QHH       IPPWLAC         P SIDLS
Sbjct: 220 -----QLHSHGLQAV----LSLKREQEQHHSFNLKPDIPPWLACPPVLEAGPGPPSIDLS 270

Query: 287 SQLFSGNIFSRSLLHNENQSASPSPNPNST--SFAPFEPPGTTGSQHTSATALLQKAAQM 344
           S L         L+++EN      PNPNST  SF        T S H SATALLQ+AAQM
Sbjct: 271 SSL-FSASLDHPLIYHEN------PNPNSTLPSFH------HTASPHMSATALLQQAAQM 317

Query: 345 GATMSTQPSALPAPVLRVPVPHQTHHMP--AGSASTAGAAGSS-SGLGLSSREDLA 397
           G TMS +PS  P P+LR   PHQ H     AG +STA A  ++ S LGLSSR+++A
Sbjct: 318 GVTMS-KPSPSP-PMLR---PHQAHMSAANAGFSSTAVATSTAGSDLGLSSRDEMA 368

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255572931|ref|XP_002527396.1| nucleic acid binding protein, putative [Ricinus communis] gi|223533206|gb|EEF34962.1| nucleic acid binding protein, putative [Ricinus communis]

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 233/378 (61%), Positives = 263/378 (69%), Gaps = 31/378 (8%)

Query: 3   MMKGLLV------EENMSNLTSASGEVTASSGSRVETGTNFYAQHSFS--STNEATPPSK 54
           MMKGL+       EENMSNLTSASGE + SSG+R ET  N+  Q  F+     ++ PP+K
Sbjct: 1   MMKGLIFHQQQQQEENMSNLTSASGEASVSSGNRNET--NYPPQQYFAHPPPPQSQPPAK 58

Query: 55  KKRSLPGNPDPDAEVIALSPKSLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQR 114
           KKR+LPGNPDPDAEVIALSPK+LMATNRF+CEICNKGFQRDQNLQLHRRGHNLPWKLKQR
Sbjct: 59  KKRNLPGNPDPDAEVIALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQR 118

Query: 115 TNK-VERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSD 173
           TNK V RKKVYVCPE +CVHHDPSRALGDLTGIKKHFSRKHGEKKWKC+KCSK+YAVQSD
Sbjct: 119 TNKEVIRKKVYVCPETSCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCDKCSKRYAVQSD 178

Query: 174 WKAHSKICGTREYKCDCGKLFSRRDSFITHRAFCDVLAEESARTITV--NPLFSPSQQQP 231
           WKAHSK CGTREY+CDCG LFSRRDSFITHRAFCD LAEESAR IT   NPL  PS Q  
Sbjct: 179 WKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAEESARAITDAPNPLLIPSNQSA 238

Query: 232 NSSATHMLNFPSHHHH-QLQS--QGLQALQL---QAVKIEDNNQQHHIPPWLACPSSIDL 285
            ++++   N  S H   QL +  Q L A  L   Q         +  +PPWLACP  +  
Sbjct: 239 AAASSATQNPISLHQVPQLMNSHQNLHAFSLKKEQQTFSTTTALRPELPPWLACPPGVLG 298

Query: 286 SSQLFSGNI------------FSRSLLHNENQSASPSPNPNSTSFAPFEPPGTTGSQHTS 333
           S                     S S+L+ +    S +PNP+     P        S H S
Sbjct: 299 SGSGHGPGPPHHQQTPIEHHHLSSSILNFQQDLGSSNPNPSLGPTLPHYQAAPPPSPHMS 358

Query: 334 ATALLQKAAQMGATMSTQ 351
           ATALLQKAAQMGATMS++
Sbjct: 359 ATALLQKAAQMGATMSSK 376

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|87162706|gb|ABD28501.1| Zinc finger, C2H2-type [Medicago truncatula]

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 232/396 (58%), Positives = 266/396 (67%), Gaps = 39/396 (9%)

Query: 13  MSNLTSASGEVTA-SSGSRVETGTNFYAQHSFSSTNEAT---PPSKKKRSLPGNPDPDAE 68
           MSNLTSASGE +A SSG+R       ++Q  F+S+   T    P+KK+R+LPGNPDP AE
Sbjct: 1   MSNLTSASGEASANSSGNRTHEVDAKFSQQYFASSQTQTHDETPAKKRRNLPGNPDPQAE 60

Query: 69  VIALSPKSLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPE 128
           VIALSPK+LMATNRF+CEICNKGFQRDQNLQLH+RGHNLPWKLKQRT+   RKKVYVCPE
Sbjct: 61  VIALSPKTLMATNRFICEICNKGFQRDQNLQLHKRGHNLPWKLKQRTSNEIRKKVYVCPE 120

Query: 129 PTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKICGTREYKC 188
           PTCVHHDPSRALGDLTGIKKHF RKHGEKKWKC+KCSKKYAVQSDWKAHSK CGTREY+C
Sbjct: 121 PTCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYRC 180

Query: 189 DCGKLFSRRDSFITHRAFCDVLAEESARTITVNPLFSPSQQQPNSSATHMLNFPSHHHHQ 248
           DCG LFSRRDSFITHRAFCD LAEES+RT+   P       QPNS          H+ + 
Sbjct: 181 DCGTLFSRRDSFITHRAFCDALAEESSRTVIPQPT------QPNS---------HHNMNN 225

Query: 249 LQSQGLQALQL----QAVKIEDNNQQHHIPPWLACPSSIDLSSQLFSGNIFSRSLLHNEN 304
           LQ+Q +Q   L    Q+  +    Q+  IP WL C SSIDLSS   S     + L   EN
Sbjct: 226 LQTQDIQGFTLKKEHQSFNMLRPEQEVQIPSWL-CQSSIDLSSNYSS---LDQDLHLYEN 281

Query: 305 QSASPSPNPNSTSFAPFEPPGTTGSQHTSATALLQKAAQMGATMSTQPSALPAPVLRVPV 364
               P+P    TS  P   P +  S H SATALLQKAAQMGAT S    ++ +       
Sbjct: 282 ----PNPRNGPTSTLPSYQPSSAASPHMSATALLQKAAQMGATSSCSSQSMMSGT----- 332

Query: 365 PHQTHHMPAGSASTAGAAGSSSG--LGLSSREDLAI 398
            HQ  H+    ++T     S+    L LSS ED  I
Sbjct: 333 -HQQGHVSIVDSATNNMINSNGNFSLNLSSCEDQMI 367

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357454633|ref|XP_003597597.1| Zinc finger protein [Medicago truncatula] gi|355486645|gb|AES67848.1| Zinc finger protein [Medicago truncatula]

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 232/396 (58%), Positives = 266/396 (67%), Gaps = 39/396 (9%)

Query: 13  MSNLTSASGEVTA-SSGSRVETGTNFYAQHSFSSTNEAT---PPSKKKRSLPGNPDPDAE 68
           MSNLTSASGE +A SSG+R       ++Q  F+S+   T    P+KK+R+LPGNPDP AE
Sbjct: 1   MSNLTSASGEASANSSGNRTHEVDAKFSQQYFASSQTQTHDETPAKKRRNLPGNPDPQAE 60

Query: 69  VIALSPKSLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPE 128
           VIALSPK+LMATNRF+CEICNKGFQRDQNLQLH+RGHNLPWKLKQRT+   RKKVYVCPE
Sbjct: 61  VIALSPKTLMATNRFICEICNKGFQRDQNLQLHKRGHNLPWKLKQRTSNEIRKKVYVCPE 120

Query: 129 PTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKICGTREYKC 188
           PTCVHHDPSRALGDLTGIKKHF RKHGEKKWKC+KCSKKYAVQSDWKAHSK CGTREY+C
Sbjct: 121 PTCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYRC 180

Query: 189 DCGKLFSRRDSFITHRAFCDVLAEESARTITVNPLFSPSQQQPNSSATHMLNFPSHHHHQ 248
           DCG LFSRRDSFITHRAFCD LAEES+RT+   P       QPNS          H+ + 
Sbjct: 181 DCGTLFSRRDSFITHRAFCDALAEESSRTVIPQPT------QPNS---------HHNMNN 225

Query: 249 LQSQGLQALQL----QAVKIEDNNQQHHIPPWLACPSSIDLSSQLFSGNIFSRSLLHNEN 304
           LQ+Q +Q   L    Q+  +    Q+  IP WL C SSIDLSS   S     + L   EN
Sbjct: 226 LQTQDIQGFTLKKEHQSFNMLRPEQEVQIPSWL-CQSSIDLSSNYSS---LDQDLHLYEN 281

Query: 305 QSASPSPNPNSTSFAPFEPPGTTGSQHTSATALLQKAAQMGATMSTQPSALPAPVLRVPV 364
               P+P    TS  P   P +  S H SATALLQKAAQMGAT S    ++ +       
Sbjct: 282 ----PNPRNGPTSTLPSYQPSSAASPHMSATALLQKAAQMGATSSCSSQSMMSGT----- 332

Query: 365 PHQTHHMPAGSASTAGAAGSSSG--LGLSSREDLAI 398
            HQ  H+    ++T     S+    L LSS ED  I
Sbjct: 333 -HQQGHVSIVDSATNNMINSNGNFSLNLSSCEDQMI 367

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302398661|gb|ADL36625.1| C2H2L domain class transcription factor [Malus x domestica]

 Score =  407 bits (1045), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 229/352 (65%), Positives = 260/352 (73%), Gaps = 19/352 (5%)

Query: 8   LVEENMSNLTSASGEV-TASSGSRVETGTNFYAQHSFSSTNEATPPSKKKRSLPGNPDPD 66
           LV+ENMSNLTSASGE  + SSG+R E GTNF +Q  F++  +A P  KKKR+LPGNPDPD
Sbjct: 12  LVDENMSNLTSASGEAASVSSGNRNEIGTNF-SQQFFTTPPQAQPALKKKRNLPGNPDPD 70

Query: 67  AEVIALSPKSLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVC 126
           AEVIALSPK+LMATNRF+CEICNKGFQRDQNLQLHRRGHNLPWKLKQRT+K  RKKVYVC
Sbjct: 71  AEVIALSPKTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKKVYVC 130

Query: 127 PEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKICGTREY 186
           PE +CVHHDPSRALGDLTGIKKHF RKHGEKKWKC+KCSK+YAVQSDWKAHSK CGTREY
Sbjct: 131 PEASCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREY 190

Query: 187 KCDCGKLFSRRDSFITHRAFCDVLAEESARTITV--NP---LFSPSQQQPNSSATHMLNF 241
           +CDCG LFSRRDSFITHRAFCD LAEESAR IT   NP   LFS  QQQ N +   +   
Sbjct: 191 RCDCGTLFSRRDSFITHRAFCDALAEESARAITSANNPHHLLFSQQQQQMNLNQVQL--- 247

Query: 242 PSHHHHQLQSQGLQALQLQAVKIEDNNQQHHIPPWLACPS-SIDLSSQLFSGN-IFSRSL 299
                HQ  +Q +    L+  +      +  +PPWL  P+ +IDLSS     +    + L
Sbjct: 248 ----GHQF-NQDIHGFSLKKEQQSFTTLRPDLPPWLGPPNCTIDLSSSSSLFSPTHHQDL 302

Query: 300 -LHNENQSASPSPNPNSTSFAPFEPPGTTG-SQHTSATALLQKAAQMGATMS 349
            L + +   S +PNP  +S  P  PP     S H SATALLQKAAQMGATMS
Sbjct: 303 SLDDSHNGTSQNPNPCPSSLGPTLPPFHPAPSPHMSATALLQKAAQMGATMS 354

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357513641|ref|XP_003627109.1| Zinc finger protein [Medicago truncatula] gi|355521131|gb|AET01585.1| Zinc finger protein [Medicago truncatula]

 Score =  406 bits (1043), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 226/371 (60%), Positives = 260/371 (70%), Gaps = 32/371 (8%)

Query: 3   MMKGLL-------VEENMSNLTSASGEVTASSGSRVETGTNF---YAQHSFSSTNEATPP 52
           M+KGL+       VEENMSNLTSASGE + SSG+R E GT+      Q  +      + P
Sbjct: 1   MVKGLMMFQQQQVVEENMSNLTSASGEASVSSGNRTEIGTSSSYPQVQQQYLVPPTQSQP 60

Query: 53  SKKKRSLPGNPDPDAEVIALSPKSLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLK 112
            KKKR+LPGNPDPDAEVIA+SPKSL+A NRF+CEICNKGFQRDQNLQLHRRGHNLPWKLK
Sbjct: 61  MKKKRNLPGNPDPDAEVIAMSPKSLLAKNRFICEICNKGFQRDQNLQLHRRGHNLPWKLK 120

Query: 113 QRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQS 172
           QRT+K  RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQS
Sbjct: 121 QRTSKEIRKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQS 180

Query: 173 DWKAHSKICGTREYKCDCGKLFSRRDSFITHRAFCDVLAEESARTITVNPL----FSPSQ 228
           DWKAHSK CGTREY+CDCG LFSRRDSFITHRAFCD LAEESAR +T N +         
Sbjct: 181 DWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAEESARAMTNNAMPILPSQQQL 240

Query: 229 QQPNSSATHMLNFPSHHHHQLQSQGLQALQLQAVKIEDNNQQHH---IPPWLACPSSIDL 285
              +S   HM+N  +  ++    Q L    L  +K E +NQ  +   IPPWL  P ++D 
Sbjct: 241 SSSSSHHHHMINLQNQFNN--PQQDLHNFPL--LKKEQHNQSFNLSEIPPWLG-PHNVD- 294

Query: 286 SSQLFSGNIFSRSLLHNENQSASPSPNPNSTSFAPFEPPG--TTGSQHTSATALLQKAAQ 343
                  N+ S S + +++     +PNP+    +    P   T  S H SATALLQKAAQ
Sbjct: 295 -------NLSSSSSIFSQHHHHQENPNPSLVHVSGPTLPSYQTVPSAHMSATALLQKAAQ 347

Query: 344 MGATMSTQPSA 354
           MGATM+   SA
Sbjct: 348 MGATMNRSGSA 358

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147854387|emb|CAN79105.1| hypothetical protein VITISV_006257 [Vitis vinifera]

 Score =  402 bits (1034), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 232/408 (56%), Positives = 265/408 (64%), Gaps = 44/408 (10%)

Query: 13  MSNLTSASGEVTASSGSRVETGTNFYAQHSFSSTNEAT------PPSKKKRSLPGNPDPD 66
           MSNLTSASGE + SSG+R ET   +  Q  F+  N+A       P  KKKR+LPGNPDPD
Sbjct: 1   MSNLTSASGEASVSSGNRAETAPMYPQQQYFAPPNQAQAQVQAQPSVKKKRNLPGNPDPD 60

Query: 67  AEVIALSPKSLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVC 126
           AEVIALSPK+LMATNRF+CEICNKGFQRDQNLQLHRRGHNLPWKLKQRT+K  RKKVYVC
Sbjct: 61  AEVIALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKKVYVC 120

Query: 127 PEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKICGTREY 186
           PE +CVHHDPSRALGDLTGIKKHF RKHGEKKWKC+KCSK+YAVQSDWKAHSK CGTREY
Sbjct: 121 PEASCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREY 180

Query: 187 KCDCGKLFSRRDSFITHRAFCDVLAEESARTITVNPLFSPSQQQPNS-----------SA 235
           +CDCG LFSRRDSFITHRAFCD LAEESAR IT NP+   SQ                S 
Sbjct: 181 RCDCGTLFSRRDSFITHRAFCDALAEESARAITGNPVLLSSQAAAGPSSSTPHSHSQMSL 240

Query: 236 THMLNFPSHHHHQLQSQGLQALQLQAVKIEDNNQQHHIPPWLAC-----PSSIDLSSQLF 290
                F S+H          A Q++  +   + +   +PPWL+      P+ +D     F
Sbjct: 241 QQQQQFNSNHD-------FHAFQMKKEQQSFSIRSEVVPPWLSSSSSLFPTRLD---HDF 290

Query: 291 SGNIFSRSLLHNENQSASPSPNPNSTSFAPFEPP-GTTGSQHTSATALLQKAAQMGATMS 349
           +      +L   +N    P+PNP   S  P  PP   T S H SATALLQKAAQMGATMS
Sbjct: 291 TQTTQDLALHDIQN----PNPNP---SLGPTLPPYHPTLSPHMSATALLQKAAQMGATMS 343

Query: 350 TQPSALPAPVLRVPVPHQTHHMPAGSASTAGAAGSSSGLGLSSREDLA 397
                  A    +  PHQ H     SA  +    +  GL LSSRE++ 
Sbjct: 344 KTTGGSGASPPAMIRPHQAH----VSADHSCNNTTGFGLNLSSREEMG 387

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356522186|ref|XP_003529728.1| PREDICTED: zinc finger protein NUTCRACKER-like [Glycine max]

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 241/389 (61%), Positives = 271/389 (69%), Gaps = 49/389 (12%)

Query: 8   LVEENMSNLTSASGEVTASSGSRVETGTNFYAQHSFSSTNEATPPSKKKRSLPGNPDPDA 67
           +VEENMSNLTSASGE +ASSG+R E GT++ A        +  PP KKKR+LPGNPDPDA
Sbjct: 17  IVEENMSNLTSASGEASASSGNRTEIGTSYMA----PPPTQIQPP-KKKRNLPGNPDPDA 71

Query: 68  EVIALSPKSLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCP 127
           EVIALSPKSL+ATNRF+CEICNKGFQRDQNLQLHRRGHNLPWKLKQRT+K  RKKVYVCP
Sbjct: 72  EVIALSPKSLLATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKKVYVCP 131

Query: 128 EPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKICGTREYK 187
           EP+CVHHDPSRALGDLTGIKKHF RKHGEKKWKC+KCSKKYAVQSDWKAHSK CGTREY+
Sbjct: 132 EPSCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYR 191

Query: 188 CDCGKLFSRRDSFITHRAFCDVLAEESARTITVNPLFSPSQQQPNSSATHMLNFPSHHHH 247
           CDCG LFSRRDSFITHRAFCD LAEESAR I  NPL  P QQQ  SS++HM    +    
Sbjct: 192 CDCGTLFSRRDSFITHRAFCDALAEESARAI-ANPLLPPQQQQ--SSSSHMSTLQT---- 244

Query: 248 QLQSQGLQALQLQAVKIEDNNQQHHIPPWLACPSSIDLSSQLFSGNIFSRSLLHNENQSA 307
           Q   Q L A  L+            +PPWL  P+++ +   L S +    S  H EN   
Sbjct: 245 QFNPQNLHAFPLKK----------EMPPWLGPPATVVVDHHLSSSSSIMFSPPHQEN--- 291

Query: 308 SPSPNPN-STSFAPFEPPGTTGSQHTSATALLQKAAQMGATMSTQPSALPAPVLRVPVPH 366
              PNP+   + A ++   T  + H SATALLQKAAQMGATMS   S  PA    +  PH
Sbjct: 292 ---PNPSLGPTLAAYQ---TVPNPHMSATALLQKAAQMGATMSRSGST-PA----MTGPH 340

Query: 367 QTHHMPAGSASTAGAAGSSSGLGLSSRED 395
              H+            S  GL LSSRED
Sbjct: 341 HHAHV------------SHFGLNLSSRED 357

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302398675|gb|ADL36632.1| C2H2L domain class transcription factor [Malus x domestica]

 Score =  397 bits (1020), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 225/347 (64%), Positives = 255/347 (73%), Gaps = 19/347 (5%)

Query: 13  MSNLTSASGEV-TASSGSRVETGTNFYAQHSFSSTNEATPPSKKKRSLPGNPDPDAEVIA 71
           MSNLTSASGE  + SSG+R E GTNF +Q  F++  +A P  KKKR+LPGNPDPDAEVIA
Sbjct: 1   MSNLTSASGEAASVSSGNRNEIGTNF-SQQFFTTPPQAQPALKKKRNLPGNPDPDAEVIA 59

Query: 72  LSPKSLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTC 131
           LSPK+LMATNRF+CEICNKGFQRDQNLQLHRRGHNLPWKLKQRT+K  RKKVYVCPE +C
Sbjct: 60  LSPKTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKKVYVCPEASC 119

Query: 132 VHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKICGTREYKCDCG 191
           VHHDPSRALGDLTGIKKHF RKHGEKKWKC+KCSK+YAVQSDWKAHSK CGTREY+CDCG
Sbjct: 120 VHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCG 179

Query: 192 KLFSRRDSFITHRAFCDVLAEESARTITV--NP---LFSPSQQQPNSSATHMLNFPSHHH 246
            LFSRRDSFITHRAFCD LAEESAR IT   NP   LFS  QQQ N +   +        
Sbjct: 180 TLFSRRDSFITHRAFCDALAEESARAITSANNPHHLLFSQQQQQMNLNQVQL-------G 232

Query: 247 HQLQSQGLQALQLQAVKIEDNNQQHHIPPWLACPS-SIDLSSQLFSGN-IFSRSL-LHNE 303
           HQ  +Q +    L+  +      +  +PPWL  P+ +IDLSS     +    + L L + 
Sbjct: 233 HQF-NQDIHGFSLKKEQQSFTTLRPDLPPWLGPPNCTIDLSSSSSLFSPTHHQDLSLDDS 291

Query: 304 NQSASPSPNPNSTSFAPFEPPGTTG-SQHTSATALLQKAAQMGATMS 349
           +   S +PNP  +S  P  PP     S H SATALLQKAAQMGATMS
Sbjct: 292 HNGTSQNPNPCPSSLGPTLPPFHPAPSPHMSATALLQKAAQMGATMS 338

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	417
TAIR|locus:2205672	455	IDD7 "AT1G55110" [Arabidopsis	0.635	0.582	0.605	2.1e-88
TAIR|locus:2024193	506	MGP "AT1G03840" [Arabidopsis t	0.482	0.397	0.689	1.4e-80
TAIR|locus:2078262	446	AT3G45260 "AT3G45260" [Arabido	0.407	0.381	0.783	5.2e-79
TAIR|locus:2173624	500	IDD1 "AT5G66730" [Arabidopsis	0.443	0.37	0.761	1.4e-78
TAIR|locus:2167608	466	NUC "AT5G44160" [Arabidopsis t	0.460	0.412	0.713	2.8e-78
TAIR|locus:2051688	516	IDD4 "indeterminate(ID)-domain	0.489	0.395	0.647	9.5e-78
TAIR|locus:2132397	402	IDD12 "AT4G02670" [Arabidopsis	0.529	0.549	0.640	2.5e-77
TAIR|locus:2051698	602	IDD5 "AT2G02070" [Arabidopsis	0.450	0.312	0.701	8.5e-77
TAIR|locus:2101739	452	IDD2 "AT3G50700" [Arabidopsis	0.729	0.672	0.516	2.1e-75
TAIR|locus:2143543	503	JKD "AT5G03150" [Arabidopsis t	0.450	0.373	0.687	1.8e-74

TAIR|locus:2205672 IDD7 "AT1G55110" [Arabidopsis thaliana (taxid:3702)]

 Score = 829 (296.9 bits), Expect = 2.1e-88, Sum P(2) = 2.1e-88
 Identities = 166/274 (60%), Positives = 189/274 (68%)

Query:     9 VEENMSNLTSASGE-VTASSGSRVETGTNFYAQHSFSSTNEATPPSKKKRSLPGNPDPDA 67
             +EENMSNLTSASG+  + SSG+R ET  +   QH            K+KR+ PGNPDP+A
Sbjct:    17 MEENMSNLTSASGDQASVSSGNRTETSGSNINQHHQEQCFVPQSSLKRKRNQPGNPDPEA 76

Query:    68 EVIALSPKSLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNK-VERKKVYVC 126
             EV+ALSPK+LMATNRF+CE+CNKGFQRDQNLQLH+RGHNLPWKLKQR+NK V RKKVYVC
Sbjct:    77 EVMALSPKTLMATNRFICEVCNKGFQRDQNLQLHKRGHNLPWKLKQRSNKDVVRKKVYVC 136

Query:   127 PEPTCVHHDPSRALGDLTGIKKHFSRKHGXXXXXXXXXXXXYAVQSDWKAHSKICGTREY 186
             PEP CVHH PSRALGDLTGIKKHF RKHG            YAVQSDWKAH+K CGT+EY
Sbjct:   137 PEPGCVHHHPSRALGDLTGIKKHFFRKHGEKKWKCEKCSKKYAVQSDWKAHAKTCGTKEY 196

Query:   187 KCDCGKLFSRRDSFITHRAFCDVLAEESARTITVNPLFSPSQQQPNSSATHMLNFPXXXX 246
             KCDCG LFSRRDSFITHRAFCD LAEESAR +  NP+   +   P+    H         
Sbjct:   197 KCDCGTLFSRRDSFITHRAFCDALAEESARAMP-NPIMIQASNSPHHHH-HQTQQNIGFS 254

Query:   247 XXXXXXXXXXXXXXXVKIEDNNQQHH---IPPWL 277
                            +K E++  QHH   IPPWL
Sbjct:   255 SSSQNIISNSNLHGPMKQEES--QHHYQNIPPWL 286

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0009617 "response to bacterium" evidence=RCA

GO:0045087 "innate immune response" evidence=RCA

TAIR|locus:2024193 MGP "AT1G03840" [Arabidopsis thaliana (taxid:3702)]

 Score = 752 (269.8 bits), Expect = 1.4e-80, Sum P(2) = 1.4e-80
 Identities = 140/203 (68%), Positives = 159/203 (78%)

Query:    16 LTSASGEVTASSGSRVETGTNFYAQHSFSSTNEA-TPPS-KKKRSLPGNPDPDAEVIALS 73
             +T+    +++S G    + T  +  H     +E+  PP  KKKR+LPGNPDP+AEVIALS
Sbjct:     1 MTTEDQTISSSGGYVQSSSTTDHVDHHHHDQHESLNPPLVKKKRNLPGNPDPEAEVIALS 60

Query:    74 PKSLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVH 133
             PK+LMATNRFLCEIC KGFQRDQNLQLHRRGHNLPWKLKQRT+K  RK+VYVCPE +CVH
Sbjct:    61 PKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKSCVH 120

Query:   134 HDPSRALGDLTGIKKHFSRKHGXXXXXXXXXXXXYAVQSDWKAHSKICGTREYKCDCGKL 193
             H P+RALGDLTGIKKHF RKHG            YAVQSDWKAHSK CGTREY+CDCG +
Sbjct:   121 HHPTRALGDLTGIKKHFCRKHGEKKWKCEKCAKRYAVQSDWKAHSKTCGTREYRCDCGTI 180

Query:   194 FSRRDSFITHRAFCDVLAEESAR 216
             FSRRDSFITHRAFCD LAEE+AR
Sbjct:   181 FSRRDSFITHRAFCDALAEETAR 203

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA;TAS

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2078262 AT3G45260 "AT3G45260" [Arabidopsis thaliana (taxid:3702)]

 Score = 750 (269.1 bits), Expect = 5.2e-79, Sum P(2) = 5.2e-79
 Identities = 134/171 (78%), Positives = 149/171 (87%)

Query:    53 SKKKRSLPGNPDPDAEVIALSPKSLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLK 112
             +K+KR+LPGNPDPDAEVIALSP SLM TNRF+CE+CNKGF+RDQNLQLHRRGHNLPWKLK
Sbjct:    38 AKRKRNLPGNPDPDAEVIALSPNSLMTTNRFICEVCNKGFKRDQNLQLHRRGHNLPWKLK 97

Query:   113 QRTNKVE-RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGXXXXXXXXXXXXYAVQ 171
             QRTNK + +KKVY+CPE TCVHHDP+RALGDLTGIKKHFSRKHG            YAV 
Sbjct:    98 QRTNKEQVKKKVYICPEKTCVHHDPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVM 157

Query:   172 SDWKAHSKICGTREYKCDCGKLFSRRDSFITHRAFCDVLAEESARTITVNP 222
             SDWKAHSKICGT+EY+CDCG LFSR+DSFITHRAFCD LAEESAR ++V P
Sbjct:   158 SDWKAHSKICGTKEYRCDCGTLFSRKDSFITHRAFCDALAEESARFVSVPP 208

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA;TAS

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009617 "response to bacterium" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:2173624 IDD1 "AT5G66730" [Arabidopsis thaliana (taxid:3702)]

 Score = 743 (266.6 bits), Expect = 1.4e-78, Sum P(2) = 1.4e-78
 Identities = 144/189 (76%), Positives = 153/189 (80%)

Query:    42 SFSST-NE-ATPPS--KKKRSLPGNPDPDAEVIALSPKSLMATNRFLCEICNKGFQRDQN 97
             S SST N+  TP S  KKKR+LPG PDPDAEVIALSPK+LMATNRF+CEICNKGFQRDQN
Sbjct:    16 SVSSTGNQNLTPKSVGKKKRNLPGMPDPDAEVIALSPKTLMATNRFVCEICNKGFQRDQN 75

Query:    98 LQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGXX 157
             LQLHRRGHNLPWKL+QR+ K  RKKVYVCP   CVHHDPSRALGDLTGIKKHF RKHG  
Sbjct:    76 LQLHRRGHNLPWKLRQRSTKEVRKKVYVCPVSGCVHHDPSRALGDLTGIKKHFCRKHGEK 135

Query:   158 XXXXXXXXXXYAVQSDWKAHSKICGTREYKCDCGKLFSRRDSFITHRAFCDVLAEESART 217
                       YAVQSDWKAHSKICGT+EYKCDCG LFSRRDSFITHRAFCD LAEESA+ 
Sbjct:   136 KWKCEKCSKKYAVQSDWKAHSKICGTKEYKCDCGTLFSRRDSFITHRAFCDALAEESAKN 195

Query:   218 ITVNPLFSP 226
              T +    P
Sbjct:   196 HTQSKKLYP 204

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

GO:0009937 "regulation of gibberellic acid mediated signaling pathway" evidence=IMP

GO:0010029 "regulation of seed germination" evidence=IMP

GO:0010431 "seed maturation" evidence=IMP

TAIR|locus:2167608 NUC "AT5G44160" [Arabidopsis thaliana (taxid:3702)]

 Score = 735 (263.8 bits), Expect = 2.8e-78, Sum P(2) = 2.8e-78
 Identities = 142/199 (71%), Positives = 158/199 (79%)

Query:    31 VETGTNFYAQHSFSST---NEA--TPPS-KKKRSLPGNPDPDAEVIALSPKSLMATNRFL 84
             + +G+ F AQ   SST   +E+   PP  KKKR+LPGNPDP+AEVIALSP +LMATNRFL
Sbjct:     9 ISSGSGF-AQPQSSSTLDHDESLINPPLVKKKRNLPGNPDPEAEVIALSPTTLMATNRFL 67

Query:    85 CEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLT 144
             CE+C KGFQRDQNLQLHRRGHNLPWKLKQRT+K  RK+VYVCPE TCVHH  SRALGDLT
Sbjct:    68 CEVCGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKTCVHHHSSRALGDLT 127

Query:   145 GIKKHFSRKHGXXXXXXXXXXXXYAVQSDWKAHSKICGTREYKCDCGKLFSRRDSFITHR 204
             GIKKHF RKHG            YAVQSDWKAHSK CGTREY+CDCG +FSRRDSFITHR
Sbjct:   128 GIKKHFCRKHGEKKWTCEKCAKRYAVQSDWKAHSKTCGTREYRCDCGTIFSRRDSFITHR 187

Query:   205 AFCDVLAEESARTITVNPL 223
             AFCD LAEE+A+   V+ L
Sbjct:   188 AFCDALAEETAKINAVSHL 206

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA;TAS

GO:0010260 "organ senescence" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0048510 "regulation of timing of transition from vegetative to reproductive phase" evidence=IMP

GO:0048573 "photoperiodism, flowering" evidence=IMP

GO:0006826 "iron ion transport" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2051688 IDD4 "indeterminate(ID)-domain 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 740 (265.6 bits), Expect = 9.5e-78, Sum P(2) = 9.5e-78
 Identities = 138/213 (64%), Positives = 165/213 (77%)

Query:    14 SNLTSASGEVTASSGSRVETGTN-FYAQHSFSST----NEATPPSKKKRSLPGNPDPDAE 68
             S+ +SA      SSG    TG N F  + +F S     N + PP KK+R+ PGNP+PDAE
Sbjct:    13 SSSSSAQPFFITSSG----TGDNDFNRKDTFMSMIQQPNSSAPPPKKRRNQPGNPNPDAE 68

Query:    69 VIALSPKSLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPE 128
             V+ALSPK+LMATNRF+C++CNKGFQR+QNLQLHRRGHNLPWKLKQ++ K  ++KVY+CPE
Sbjct:    69 VVALSPKTLMATNRFICDVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEVKRKVYLCPE 128

Query:   129 PTCVHHDPSRALGDLTGIKKHFSRKHGXXXXXXXXXXXXYAVQSDWKAHSKICGTREYKC 188
             PTCVHHDPSRALGDLTGIKKH+ RKHG            YAVQSDWKAHSK CGT+EY+C
Sbjct:   129 PTCVHHDPSRALGDLTGIKKHYYRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTKEYRC 188

Query:   189 DCGKLFSRRDSFITHRAFCDVLAEESARTITVN 221
             DCG +FSRRDS+ITHRAFCD L +E+AR  TV+
Sbjct:   189 DCGTIFSRRDSYITHRAFCDALIQETARNPTVS 221

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2132397 IDD12 "AT4G02670" [Arabidopsis thaliana (taxid:3702)]

 Score = 750 (269.1 bits), Expect = 2.5e-77, Sum P(2) = 2.5e-77
 Identities = 148/231 (64%), Positives = 172/231 (74%)

Query:    16 LTSASGEVTASSGSR-VETGTNFYAQHSFSS---TNEATPPSKKKRSLPGNPDPDAEVIA 71
             L+S S E +ASSG+  + T   F   H+  S   T+  T   KKKR LPGNPDPDAEVIA
Sbjct:    11 LSSLSTEASASSGNNTLSTIQEFSGFHNVISSVCTHTETHKPKKKRGLPGNPDPDAEVIA 70

Query:    72 LSPKSLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQR-TNKVERKKVYVCPEPT 130
             LSPK+L+ATNRF+CEICNKGFQRDQNLQLHRRGHNLPWKLKQ+ T + ++KKVYVCPE  
Sbjct:    71 LSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQKNTKEQQKKKVYVCPETN 130

Query:   131 CVHHDPSRALGDLTGIKKHFSRKHGXXXXXXXXXXXXYAVQSDWKAHSKICGTREYKCDC 190
             C HH PSRALGDLTGIKKHF RKHG            YAVQSDWKAH+KICGTR+Y+CDC
Sbjct:   131 CAHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKFYAVQSDWKAHTKICGTRDYRCDC 190

Query:   191 GKLFSRRDSFITHRAFCDVLAEESAR--TITVNPLFSPSQQQPNSSATHML 239
             G LFSR+D+FITHRAFCD LAEESAR  + + + L +P+   PN    H +
Sbjct:   191 GTLFSRKDTFITHRAFCDALAEESARLHSTSSSNLTNPN---PNFQGHHFM 238

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2051698 IDD5 "AT2G02070" [Arabidopsis thaliana (taxid:3702)]

 Score = 717 (257.5 bits), Expect = 8.5e-77, Sum P(2) = 8.5e-77
 Identities = 134/191 (70%), Positives = 151/191 (79%)

Query:    51 PPSKKKRSLPGNPDPDAEVIALSPKSLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWK 110
             PP KKKR+ P  P+ DAEVIALSPK+LMATNRF+CE+CNKGFQR+QNLQLHRRGHNLPWK
Sbjct:    49 PPQKKKRNQPRTPNSDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWK 108

Query:   111 LKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGXXXXXXXXXXXXYAV 170
             LKQ++ K  ++KVY+CPEP+CVHHDPSRALGDLTGIKKH+ RKHG            YAV
Sbjct:   109 LKQKSTKEVKRKVYLCPEPSCVHHDPSRALGDLTGIKKHYYRKHGEKKWKCDKCSKRYAV 168

Query:   171 QSDWKAHSKICGTREYKCDCGKLFSRRDSFITHRAFCDVLAEESARTITVNPLFS-PSQQ 229
             QSDWKAHSK CGT+EY+CDCG LFSRRDSFITHRAFCD LA+ESAR  T   L S PS  
Sbjct:   169 QSDWKAHSKTCGTKEYRCDCGTLFSRRDSFITHRAFCDALAQESARHPT--SLTSLPSHH 226

Query:   230 QPNSSATHMLN 240
              P    T+  N
Sbjct:   227 FPYGQNTNNSN 237

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0006417 "regulation of translation" evidence=RCA

GO:0009657 "plastid organization" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:2101739 IDD2 "AT3G50700" [Arabidopsis thaliana (taxid:3702)]

 Score = 760 (272.6 bits), Expect = 2.1e-75, P = 2.1e-75
 Identities = 174/337 (51%), Positives = 206/337 (61%)

Query:    39 AQHSFSSTNEATP-PS---KKKRSLPGNPDPDAEVIALSPKSLMATNRFLCEICNKGFQR 94
             A  S SST    P P+   KKKR+LPG PDP++EVIALSPK+L+ATNRF+CEICNKGFQR
Sbjct:    15 ASVSISSTGNQNPLPNSTGKKKRNLPGMPDPESEVIALSPKTLLATNRFVCEICNKGFQR 74

Query:    95 DQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKH 154
             DQNLQLHRRGHNLPWKL+Q++NK  +KKVYVCPE +CVHHDPSRALGDLTGIKKHF RKH
Sbjct:    75 DQNLQLHRRGHNLPWKLRQKSNKEVKKKVYVCPEVSCVHHDPSRALGDLTGIKKHFCRKH 134

Query:   155 GXXXXXXXXXXXXYAVQSDWKAHSKICGTREYKCDCGKLFSRRDSFITHRAFCDVLAEES 214
             G            YAVQSDWKAHSKICGT+EYKCDCG LFSRRDSFITHRAFCD LAEE+
Sbjct:   135 GEKKWKCDKCSKKYAVQSDWKAHSKICGTKEYKCDCGTLFSRRDSFITHRAFCDALAEEN 194

Query:   215 ARTITVNPLFSPSQQQPNSSATHMLNFPXXXXXXXXXXXXXXXXXXXVKIEDNNQQHHIP 274
             AR+       S S++Q     T     P                   + I+ + +    P
Sbjct:   195 ARSH-----HSQSKKQNPEILTRKNPVPNPVPAPVDTESAKIKSSSTLTIKQS-ESPKTP 248

Query:   275 PWLAC----PSSIDL--SSQLFSGNIFSRSLLHNENQXXXXXXXXXXXXXXXXEP----- 323
             P +      P+S+++  S+ +F+G +F  S                       EP     
Sbjct:   249 PEIVQEAPKPTSLNVVTSNGVFAG-LFESSSASPSIYTTSSSSKSLFASSSSIEPISLGL 307

Query:   324 ---PGTT--GSQ--HT----SATALLQKAAQMGATMS 349
                 G++  GS   H     SATALLQKAAQMGA  S
Sbjct:   308 STSHGSSFLGSNRFHAQPAMSATALLQKAAQMGAASS 344

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA;TAS

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009617 "response to bacterium" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:2143543 JKD "AT5G03150" [Arabidopsis thaliana (taxid:3702)]

 Score = 702 (252.2 bits), Expect = 1.8e-74, Sum P(2) = 1.8e-74
 Identities = 132/192 (68%), Positives = 150/192 (78%)

Query:    53 SKKKRSLPGNPDPDAEVIALSPKSLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLK 112
             +KKKR+ PG PDPDA+VIALSP +LMATNRF+CEICNKGFQRDQNLQLHRRGHNLPWKLK
Sbjct:    52 AKKKRNQPGTPDPDADVIALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLK 111

Query:   113 QRTNK-VERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGXXXXXXXXXXXXYAVQ 171
             QR+ + V +KKVY+CP  TCVHHD SRALGDLTGIKKH+SRKHG            YAVQ
Sbjct:   112 QRSKQEVIKKKVYICPIKTCVHHDASRALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQ 171

Query:   172 SDWKAHSKICGTREYKCDCGKLFSRRDSFITHRAFCDVLAEESARTITV---NPLFSPSQ 228
             SDWKAH+K CGTREYKCDCG LFSR+DSFITHRAFCD L EE AR  ++   NP+ S + 
Sbjct:   172 SDWKAHAKTCGTREYKCDCGTLFSRKDSFITHRAFCDALTEEGARMSSLSNNNPVISTTN 231

Query:   229 QQPNSSATHMLN 240
                 + +  M N
Sbjct:   232 LNFGNESNVMNN 243

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

GO:0010075 "regulation of meristem growth" evidence=IMP

GO:0042803 "protein homodimerization activity" evidence=IPI

GO:0048364 "root development" evidence=IMP

GO:0051302 "regulation of cell division" evidence=IMP

GO:0045604 "regulation of epidermal cell differentiation" evidence=IMP

GO:0048527 "lateral root development" evidence=RCA

GO:0048589 "developmental growth" evidence=RCA

GO:0048765 "root hair cell differentiation" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	417
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.92
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.87
KOG3576	267	consensus Ovo and related transcription factors [T	99.75
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	99.66
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	99.61
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	99.58
KOG3608	467	consensus Zn finger proteins [General function pre	99.46
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	99.46
KOG3576	267	consensus Ovo and related transcription factors [T	99.43
KOG3608	467	consensus Zn finger proteins [General function pre	99.31
PLN03086	567	PRLI-interacting factor K; Provisional	99.24
PHA00733	128	hypothetical protein	99.02
PHA00733	128	hypothetical protein	98.99
PHA02768	55	hypothetical protein; Provisional	98.7
PLN03086	567	PRLI-interacting factor K; Provisional	98.7
PHA02768	55	hypothetical protein; Provisional	98.62
KOG3993	500	consensus Transcription factor (contains Zn finger	98.58
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.51
KOG3993	500	consensus Transcription factor (contains Zn finger	98.38
PHA00616	44	hypothetical protein	97.97
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.91
PHA00732	79	hypothetical protein	97.88
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.87
PHA00732	79	hypothetical protein	97.78
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	97.74
PHA00616	44	hypothetical protein	97.72
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.68
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.63
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.3
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.26
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.25
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.17
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.1
KOG2231	669	consensus Predicted E3 ubiquitin ligase [Posttrans	96.9
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	96.79
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	96.76
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	96.69
smart00355	26	ZnF_C2H2 zinc finger.	96.37
KOG1146	1406	consensus Homeobox protein [General function predi	96.34
PRK04860	160	hypothetical protein; Provisional	96.12
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.03
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	95.96
COG5048	467	FOG: Zn-finger [General function prediction only]	95.88
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	95.66
PRK04860	160	hypothetical protein; Provisional	95.48
smart00355	26	ZnF_C2H2 zinc finger.	95.39
COG5236	493	Uncharacterized conserved protein, contains RING Z	95.29
KOG1146	1406	consensus Homeobox protein [General function predi	94.91
COG5048	467	FOG: Zn-finger [General function prediction only]	94.67
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	94.64
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	94.15
KOG4173	253	consensus Alpha-SNAP protein [Intracellular traffi	93.52
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	93.37
KOG2231	669	consensus Predicted E3 ubiquitin ligase [Posttrans	93.17
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	93.05
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	92.67
KOG2785	390	consensus C2H2-type Zn-finger protein [General fun	91.63
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	91.11
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	90.0
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	89.46
COG5236	493	Uncharacterized conserved protein, contains RING Z	89.24
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	86.96
KOG2893	341	consensus Zn finger protein [General function pred	86.58
KOG2482	423	consensus Predicted C2H2-type Zn-finger protein [T	86.17
KOG2482	423	consensus Predicted C2H2-type Zn-finger protein [T	85.59
COG4049	65	Uncharacterized protein containing archaeal-type C	84.95
KOG4173	253	consensus Alpha-SNAP protein [Intracellular traffi	83.75
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	83.2
KOG2186	276	consensus Cell growth-regulating nucleolar protein	82.78
COG4049	65	Uncharacterized protein containing archaeal-type C	82.59
KOG4167	907	consensus Predicted DNA-binding protein, contains	81.54
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	81.42
KOG2893	341	consensus Zn finger protein [General function pred	80.8

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.92  E-value=4e-25  Score=203.55  Aligned_cols=106  Identities=25%  Similarity=0.513  Sum_probs=88.5

Q ss_pred             CCceecccccccccChHHHHHHHHhcCCCcccccccccccCCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCcc
Q 014855           80 TNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKW  159 (417)
Q Consensus        80 ~k~~~C~~Cgk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~  159 (417)
                      .+.|.|++|||.|.+...|+.|+|+|+               .+++|.+|       ||.|.+.+-|+.|+|+|+|||||
T Consensus       159 ~ka~~C~~C~K~YvSmpALkMHirTH~---------------l~c~C~iC-------GKaFSRPWLLQGHiRTHTGEKPF  216 (279)
T KOG2462|consen  159 KKAFSCKYCGKVYVSMPALKMHIRTHT---------------LPCECGIC-------GKAFSRPWLLQGHIRTHTGEKPF  216 (279)
T ss_pred             cccccCCCCCceeeehHHHhhHhhccC---------------CCcccccc-------cccccchHHhhcccccccCCCCc
Confidence            344555555555555555555555543               67889998       99999999999999999999999


Q ss_pred             ccCcCCccccChhhHHHHHHH-hCCCceeec-CCCccCCchHHHHHHhhc
Q 014855          160 KCEKCSKKYAVQSDWKAHSKI-CGTREYKCD-CGKLFSRRDSFITHRAFC  207 (417)
Q Consensus       160 ~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~-C~k~F~~~~~L~~H~~~h  207 (417)
                      .|..|+|+|..+++|+.||++ .+.|.|.|. |+|+|.+++.|.+|....
T Consensus       217 ~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~ES~  266 (279)
T KOG2462|consen  217 SCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSESA  266 (279)
T ss_pred             cCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhhhc
Confidence            999999999999999999999 688999999 999999999999998754

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.87  E-value=1.5e-22  Score=186.63  Aligned_cols=127  Identities=20%  Similarity=0.471  Sum_probs=113.8

Q ss_pred             cCCCCceecccccccccChHHHHHHHHhcCCCcccccccccccCCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCC
Q 014855           77 LMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGE  156 (417)
Q Consensus        77 ~~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~e  156 (417)
                      .....+|+|..|||.|.+..+|.+|+.+|..          ....+.+.|++|       +|.|.....|+.|+|+|+  
T Consensus       125 ~~~~~r~~c~eCgk~ysT~snLsrHkQ~H~~----------~~s~ka~~C~~C-------~K~YvSmpALkMHirTH~--  185 (279)
T KOG2462|consen  125 AAKHPRYKCPECGKSYSTSSNLSRHKQTHRS----------LDSKKAFSCKYC-------GKVYVSMPALKMHIRTHT--  185 (279)
T ss_pred             cccCCceeccccccccccccccchhhccccc----------ccccccccCCCC-------CceeeehHHHhhHhhccC--
Confidence            3456689999999999999999999999962          124688999999       999999999999999998  


Q ss_pred             CccccCcCCccccChhhHHHHHHH-hCCCceeec-CCCccCCchHHHHHHhhcc----ccccccCccccCCC
Q 014855          157 KKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD-CGKLFSRRDSFITHRAFCD----VLAEESARTITVNP  222 (417)
Q Consensus       157 kp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~-C~k~F~~~~~L~~H~~~h~----~~~~~~~~~~~~~~  222 (417)
                      -+++|.+|||.|.+.+.|..|+|+ +|||||.|. |+|.|..+++|+.|+++|.    ..|..|++.|....
T Consensus       186 l~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~S  257 (279)
T KOG2462|consen  186 LPCECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKS  257 (279)
T ss_pred             CCcccccccccccchHHhhcccccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHH
Confidence            679999999999999999999999 999999999 9999999999999999985    66777888776533

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=99.75  E-value=4.6e-19  Score=155.81  Aligned_cols=113  Identities=24%  Similarity=0.528  Sum_probs=105.1

Q ss_pred             CCCCceecccccccccChHHHHHHHHhcCCCcccccccccccCCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCC
Q 014855           78 MATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEK  157 (417)
Q Consensus        78 ~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ek  157 (417)
                      .+...|.|.+|+|.|.....|.+|++.|.             ..|.|.|..|       ||.|.+.-.|++|+|+|+|.+
T Consensus       113 sd~d~ftCrvCgK~F~lQRmlnrh~kch~-------------~vkr~lct~c-------gkgfndtfdlkrh~rthtgvr  172 (267)
T KOG3576|consen  113 SDQDSFTCRVCGKKFGLQRMLNRHLKCHS-------------DVKRHLCTFC-------GKGFNDTFDLKRHTRTHTGVR  172 (267)
T ss_pred             CCCCeeeeehhhhhhhHHHHHHHHhhhcc-------------HHHHHHHhhc-------cCcccchhhhhhhhccccCcc
Confidence            44578999999999999999999999998             7889999999       999999999999999999999


Q ss_pred             ccccCcCCccccChhhHHHHHHH-hC-----------CCceeec-CCCccCCchHHHHHHhhcccc
Q 014855          158 KWKCEKCSKKYAVQSDWKAHSKI-CG-----------TREYKCD-CGKLFSRRDSFITHRAFCDVL  210 (417)
Q Consensus       158 p~~C~~C~k~F~~~~~L~~H~~~-~~-----------ekp~~C~-C~k~F~~~~~L~~H~~~h~~~  210 (417)
                      ||+|..|+|+|..+-.|..|++. ||           +|.|.|+ ||.+-.+...+..|++.|+..
T Consensus       173 pykc~~c~kaftqrcsleshl~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~  238 (267)
T KOG3576|consen  173 PYKCSLCEKAFTQRCSLESHLKKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPF  238 (267)
T ss_pred             ccchhhhhHHHHhhccHHHHHHHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCC
Confidence            99999999999999999999987 75           4789999 999999999999999998743

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=99.66  E-value=1.4e-17  Score=172.15  Aligned_cols=82  Identities=21%  Similarity=0.437  Sum_probs=73.1

Q ss_pred             eeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcCCccccChhhHHHHHHHhCCCc-----eeec----CCCc
Q 014855          123 VYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKICGTRE-----YKCD----CGKL  193 (417)
Q Consensus       123 ~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~~~ekp-----~~C~----C~k~  193 (417)
                      +..|-+|       .|++.-++.|+.|+|+|+|||||+|++||++|.++.+|+.|+.+|..||     |.|.    |-+.
T Consensus       605 PNqCiiC-------~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~k  677 (958)
T KOG1074|consen  605 PNQCIIC-------LRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKK  677 (958)
T ss_pred             ccceeee-------eecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhccc
Confidence            3568777       9999999999999999999999999999999999999999999987665     7784    8999


Q ss_pred             cCCchHHHHHHhhccccc
Q 014855          194 FSRRDSFITHRAFCDVLA  211 (417)
Q Consensus       194 F~~~~~L~~H~~~h~~~~  211 (417)
                      |...-.|..|++.|....
T Consensus       678 ftn~V~lpQhIriH~~~~  695 (958)
T KOG1074|consen  678 FTNAVTLPQHIRIHLGGQ  695 (958)
T ss_pred             ccccccccceEEeecCCC
Confidence            999999999999986433

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=99.61  E-value=2.5e-16  Score=163.02  Aligned_cols=58  Identities=21%  Similarity=0.499  Sum_probs=52.8

Q ss_pred             cccCcCCccccChhhHHHHHHH-hCCCceeec-CCCccCCchHHHHHHhhccccccccCc
Q 014855          159 WKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD-CGKLFSRRDSFITHRAFCDVLAEESAR  216 (417)
Q Consensus       159 ~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~-C~k~F~~~~~L~~H~~~h~~~~~~~~~  216 (417)
                      ..|.+|||.|.....|..|+|+ +|+|||.|. |++.|..+.+|+.||.+|+-......+
T Consensus       880 h~C~vCgk~FsSSsALqiH~rTHtg~KPF~C~fC~~aFttrgnLKvHMgtH~w~q~~srr  939 (958)
T KOG1074|consen  880 HVCNVCGKQFSSSAALEIHMRTHTGPKPFFCHFCEEAFTTRGNLKVHMGTHMWVQPPSRR  939 (958)
T ss_pred             hhhccchhcccchHHHHHhhhcCCCCCCccchhhhhhhhhhhhhhhhhccccccCCCccC
Confidence            5699999999999999999999 899999999 999999999999999999866555544

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=99.58  E-value=1e-15  Score=155.96  Aligned_cols=107  Identities=24%  Similarity=0.536  Sum_probs=95.9

Q ss_pred             ceecccccccccChHHHHHHHHhcCCCcccccccccccCCceeeCCCCCccCCCCCCcccCHHHHHHHHhhcc-------
Q 014855           82 RFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKH-------  154 (417)
Q Consensus        82 ~~~C~~Cgk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~-------  154 (417)
                      ...|.+|.+.|.+...|+.|++.-+..           .+.-|.|..|       ...|..+..|.+||.+|.       
T Consensus       210 lltcpycdrgykrltslkeHikyrhek-----------ne~nfsC~lC-------sytFAyRtQLErhm~~hkpg~dqa~  271 (1007)
T KOG3623|consen  210 LLTCPYCDRGYKRLTSLKEHIKYRHEK-----------NEPNFSCMLC-------SYTFAYRTQLERHMQLHKPGGDQAI  271 (1007)
T ss_pred             hhcchhHHHHHHHHHHHHHHHHHHHhh-----------CCCCCcchhh-------hhhhhhHHHHHHHHHhhcCCCcccc
Confidence            468999999999999999998754411           4566899999       999999999999999986       


Q ss_pred             ------CCCccccCcCCccccChhhHHHHHHH-hCCCceeec-CCCccCCchHHHHHHhh
Q 014855          155 ------GEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD-CGKLFSRRDSFITHRAF  206 (417)
Q Consensus       155 ------~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~-C~k~F~~~~~L~~H~~~  206 (417)
                            +.|.|+|.+|||+|+.+.+|+.|+|+ .|||||.|. |+|+|+...++..||..
T Consensus       272 sltqsa~lRKFKCtECgKAFKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmSS  331 (1007)
T KOG3623|consen  272 SLTQSALLRKFKCTECGKAFKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMSS  331 (1007)
T ss_pred             cccchhhhccccccccchhhhhHHHHHhhheeecCCCCcCCcccccccccCCcccccccc
Confidence                  24889999999999999999999999 899999999 99999999999999854

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=99.46  E-value=3.4e-14  Score=134.61  Aligned_cols=147  Identities=15%  Similarity=0.281  Sum_probs=105.1

Q ss_pred             cCCCCCCCCCCChhhhhcCccccCCCCceecccccccccChHHHHHHHHhcC----CCccccccccccc-----------
Q 014855           55 KKRSLPGNPDPDAEVIALSPKSLMATNRFLCEICNKGFQRDQNLQLHRRGHN----LPWKLKQRTNKVE-----------  119 (417)
Q Consensus        55 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~----~p~~~~~~~~~~~-----------  119 (417)
                      -+...+-.....+..+..+.+.|+++|...|+.||..|.++..|--|.+.-+    .+|.|+.+.+...           
T Consensus       180 C~W~~Ct~~~~~k~~LreH~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~r  259 (467)
T KOG3608|consen  180 CNWAMCTKHMGNKYRLREHIRTHSNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVR  259 (467)
T ss_pred             ccchhhhhhhccHHHHHHHHHhcCCCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHH
Confidence            3444555566778888899999999999999999999999999888876554    4666765433221           


Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhh-ccCCCccccCcCCccccChhhHHHHHHHhCCCceeec---CCCccC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSR-KHGEKKWKCEKCSKKYAVQSDWKAHSKICGTREYKCD---CGKLFS  195 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~-H~~ekp~~C~~C~k~F~~~~~L~~H~~~~~ekp~~C~---C~k~F~  195 (417)
                      ....|+|+.|       +......+.|.+|++. |..+|||+|+.|++.|.+.+.|.+|..+|.+-.|.|+   |...|+
T Consensus       260 Hvn~ykCplC-------dmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS~~~y~C~h~~C~~s~r  332 (467)
T KOG3608|consen  260 HVNCYKCPLC-------DMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHSKTVYQCEHPDCHYSVR  332 (467)
T ss_pred             hhhccccccc-------ccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhccccceecCCCCCcHHHH
Confidence            2245778777       7777777778888773 6667888888888888888888777776655566663   666666


Q ss_pred             CchHHHHHHhhcc
Q 014855          196 RRDSFITHRAFCD  208 (417)
Q Consensus       196 ~~~~L~~H~~~h~  208 (417)
                      ....+++|++.++
T Consensus       333 ~~~q~~~H~~evh  345 (467)
T KOG3608|consen  333 TYTQMRRHFLEVH  345 (467)
T ss_pred             HHHHHHHHHHHhc
Confidence            6666666665554

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=99.46  E-value=2.9e-14  Score=145.60  Aligned_cols=81  Identities=25%  Similarity=0.588  Sum_probs=65.0

Q ss_pred             CCceecccccccccChHHHHHHHHhcCCCcccccccccccCCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCcc
Q 014855           80 TNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKW  159 (417)
Q Consensus        80 ~k~~~C~~Cgk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~  159 (417)
                      ...|.|+.|+|.|...+.|.||.--|+             |.+||+|.+|       .|+|+.+.+|..|+|.|.|||||
T Consensus       892 ~gmyaCDqCDK~FqKqSSLaRHKYEHs-------------GqRPyqC~iC-------kKAFKHKHHLtEHkRLHSGEKPf  951 (1007)
T KOG3623|consen  892 DGMYACDQCDKAFQKQSSLARHKYEHS-------------GQRPYQCIIC-------KKAFKHKHHLTEHKRLHSGEKPF  951 (1007)
T ss_pred             cccchHHHHHHHHHhhHHHHHhhhhhc-------------CCCCcccchh-------hHhhhhhhhhhhhhhhccCCCcc
Confidence            446888888888888888888887777             7888888888       88888888888888888888888


Q ss_pred             ccCcCCccccChhhHHHHHHH
Q 014855          160 KCEKCSKKYAVQSDWKAHSKI  180 (417)
Q Consensus       160 ~C~~C~k~F~~~~~L~~H~~~  180 (417)
                      .|+.|+|+|.....+..||..
T Consensus       952 QCdKClKRFSHSGSYSQHMNH  972 (1007)
T KOG3623|consen  952 QCDKCLKRFSHSGSYSQHMNH  972 (1007)
T ss_pred             hhhhhhhhcccccchHhhhcc
Confidence            888888888887777777753

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=99.43  E-value=2.7e-14  Score=125.96  Aligned_cols=82  Identities=26%  Similarity=0.511  Sum_probs=78.1

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec-CCCccCCc
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD-CGKLFSRR  197 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~-C~k~F~~~  197 (417)
                      +...|.|.+|       +|.|....-|.+|++-|...|.|-|..|||.|....+|++|+|+ +|.+||+|. |+|.|..+
T Consensus       114 d~d~ftCrvC-------gK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqr  186 (267)
T KOG3576|consen  114 DQDSFTCRVC-------GKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQR  186 (267)
T ss_pred             CCCeeeeehh-------hhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhh
Confidence            5677999999       99999999999999999999999999999999999999999999 899999999 99999999


Q ss_pred             hHHHHHHhhcc
Q 014855          198 DSFITHRAFCD  208 (417)
Q Consensus       198 ~~L~~H~~~h~  208 (417)
                      .+|..|.++.|
T Consensus       187 csleshl~kvh  197 (267)
T KOG3576|consen  187 CSLESHLKKVH  197 (267)
T ss_pred             ccHHHHHHHHc
Confidence            99999987655

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=99.31  E-value=1.6e-12  Score=123.43  Aligned_cols=126  Identities=21%  Similarity=0.361  Sum_probs=108.2

Q ss_pred             ccCCCCceecccccccccChHHHHHHHHhcCCCcccccc--------------cccccCCceeeCCCCCccCCCCCCccc
Q 014855           76 SLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQR--------------TNKVERKKVYVCPEPTCVHHDPSRALG  141 (417)
Q Consensus        76 ~~~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~p~~~~~~--------------~~~~~~~k~~~C~~C~C~~~~~~k~f~  141 (417)
                      .....++|.|..|.|.|.++..|+.|++.|..-|+|-.+              .-.|...|+|+|+.|       ++.|.
T Consensus       231 t~l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~C-------d~~c~  303 (467)
T KOG3608|consen  231 TELNTNSFQCAQCFKRFATEKLLKSHVVRHVNCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDEC-------DTRCV  303 (467)
T ss_pred             hhhcCCchHHHHHHHHHhHHHHHHHHHHHhhhcccccccccCCCChHHHHHHHHhhhccCCCccccch-------hhhhc
Confidence            345567999999999999999999999999877776421              123557899999999       99999


Q ss_pred             CHHHHHHHHhhccCCCccccCc--CCccccChhhHHHHHHH-h-C--CCceeec-CCCccCCchHHHHHHhhccc
Q 014855          142 DLTGIKKHFSRKHGEKKWKCEK--CSKKYAVQSDWKAHSKI-C-G--TREYKCD-CGKLFSRRDSFITHRAFCDV  209 (417)
Q Consensus       142 ~~~~L~~H~~~H~~ekp~~C~~--C~k~F~~~~~L~~H~~~-~-~--ekp~~C~-C~k~F~~~~~L~~H~~~h~~  209 (417)
                      +.+.|.+|...|. +..|.|+.  |..+|+....+++|++. + |  +-+|.|. |.+.|.+..+|.+|+...|.
T Consensus       304 ~esdL~kH~~~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~CH~Cdr~ft~G~~L~~HL~kkH~  377 (467)
T KOG3608|consen  304 RESDLAKHVQVHS-KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYACHCCDRFFTSGKSLSAHLMKKHG  377 (467)
T ss_pred             cHHHHHHHHHhcc-ccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceeeecchhhhccchhHHHHHHHhhc
Confidence            9999999999998 77899988  99999999999999998 5 3  3579999 99999999999999766553

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.24  E-value=1.5e-11  Score=126.83  Aligned_cols=104  Identities=22%  Similarity=0.460  Sum_probs=89.6

Q ss_pred             CCceecccccccccChHHHHHHHHhcCCCcccccccccccCCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCcc
Q 014855           80 TNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKW  159 (417)
Q Consensus        80 ~k~~~C~~Cgk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~  159 (417)
                      ++.+.|+.|++.|. ...|..|+++|+               +++.|+ |       ++.+ .+..|..|+.+|..+|++
T Consensus       451 ~~H~~C~~Cgk~f~-~s~LekH~~~~H---------------kpv~Cp-C-------g~~~-~R~~L~~H~~thCp~Kpi  505 (567)
T PLN03086        451 KNHVHCEKCGQAFQ-QGEMEKHMKVFH---------------EPLQCP-C-------GVVL-EKEQMVQHQASTCPLRLI  505 (567)
T ss_pred             ccCccCCCCCCccc-hHHHHHHHHhcC---------------CCccCC-C-------CCCc-chhHHHhhhhccCCCCce
Confidence            45678999999996 688999999886               679998 8       8655 668999999999999999


Q ss_pred             ccCcCCcccc----------ChhhHHHHHHHhCCCceeec-CCCccCCchHHHHHHhhccc
Q 014855          160 KCEKCSKKYA----------VQSDWKAHSKICGTREYKCD-CGKLFSRRDSFITHRAFCDV  209 (417)
Q Consensus       160 ~C~~C~k~F~----------~~~~L~~H~~~~~ekp~~C~-C~k~F~~~~~L~~H~~~h~~  209 (417)
                      .|..|++.|.          ....|..|..++|.+++.|. ||+.|..+ .|..|+..+|.
T Consensus       506 ~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~CG~rt~~C~~Cgk~Vrlr-dm~~H~~~~h~  565 (567)
T PLN03086        506 TCRFCGDMVQAGGSAMDVRDRLRGMSEHESICGSRTAPCDSCGRSVMLK-EMDIHQIAVHQ  565 (567)
T ss_pred             eCCCCCCccccCccccchhhhhhhHHHHHHhcCCcceEccccCCeeeeh-hHHHHHHHhhc
Confidence            9999999995          24589999999999999999 99999887 67889877764

>PHA00733 hypothetical protein

Probab=99.02  E-value=1.8e-10  Score=97.80  Aligned_cols=84  Identities=15%  Similarity=0.273  Sum_probs=69.6

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHH--H---hhccCCCccccCcCCccccChhhHHHHHHHhCCCceeec-CCCc
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKH--F---SRKHGEKKWKCEKCSKKYAVQSDWKAHSKICGTREYKCD-CGKL  193 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H--~---~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~~~ekp~~C~-C~k~  193 (417)
                      ..+++.|.+|       .+.|.....|..|  +   ..++++++|.|+.||+.|.....|..|++.+ +++|.|. |++.
T Consensus        37 ~~~~~~~~~~-------~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h-~~~~~C~~CgK~  108 (128)
T PHA00733         37 EQKRLIRAVV-------KTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT-EHSKVCPVCGKE  108 (128)
T ss_pred             hhhhHHHHHH-------hhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC-CcCccCCCCCCc
Confidence            4578999998       7777766665554  2   2344589999999999999999999999875 5689999 9999


Q ss_pred             cCCchHHHHHHhhccccc
Q 014855          194 FSRRDSFITHRAFCDVLA  211 (417)
Q Consensus       194 F~~~~~L~~H~~~h~~~~  211 (417)
                      |.....|.+|+...|..+
T Consensus       109 F~~~~sL~~H~~~~h~~~  126 (128)
T PHA00733        109 FRNTDSTLDHVCKKHNIC  126 (128)
T ss_pred             cCCHHHHHHHHHHhcCcc
Confidence            999999999999887665

>PHA00733 hypothetical protein

Probab=98.99  E-value=5.2e-10  Score=94.99  Aligned_cols=97  Identities=15%  Similarity=0.148  Sum_probs=77.2

Q ss_pred             hhhhhcCccccCCCCceecccccccccChHHHHHH--HHhcCCCcccccccccccCCceeeCCCCCccCCCCCCcccCHH
Q 014855           67 AEVIALSPKSLMATNRFLCEICNKGFQRDQNLQLH--RRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLT  144 (417)
Q Consensus        67 ~~~~~~~~~~~~~~k~~~C~~Cgk~F~~~~~L~~H--~~~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~f~~~~  144 (417)
                      .+.+........+.|++.|.+|++.|.....|..|  .+.|.          ...+.++|.|+.|       ++.|....
T Consensus        25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~----------~~~~~kPy~C~~C-------gk~Fss~s   87 (128)
T PHA00733         25 LEELKRYHSLTPEQKRLIRAVVKTLIYNPQLLDESSYLYKLL----------TSKAVSPYVCPLC-------LMPFSSSV   87 (128)
T ss_pred             HHHhhhhhcCChhhhhHHHHHHhhhccChhhhcchHHHHhhc----------ccCCCCCccCCCC-------CCcCCCHH
Confidence            44444444445567899999999999998887766  22221          0115789999999       99999999


Q ss_pred             HHHHHHhhccCCCccccCcCCccccChhhHHHHHHH-hC
Q 014855          145 GIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CG  182 (417)
Q Consensus       145 ~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~  182 (417)
                      .|..|++.|  +++|.|.+|++.|.....|.+|+.. |+
T Consensus        88 ~L~~H~r~h--~~~~~C~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733         88 SLKQHIRYT--EHSKVCPVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             HHHHHHhcC--CcCccCCCCCCccCCHHHHHHHHHHhcC
Confidence            999999987  4679999999999999999999988 65

>PHA02768 hypothetical protein; Provisional

Probab=98.70  E-value=4.9e-09  Score=74.27  Aligned_cols=42  Identities=14%  Similarity=0.347  Sum_probs=28.3

Q ss_pred             eeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcCCccccChhhH
Q 014855          124 YVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDW  174 (417)
Q Consensus       124 ~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L  174 (417)
                      |.|++|       |+.|.....|.+|+++|+  ++|+|..|+|.|.+.+.|
T Consensus         6 y~C~~C-------GK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          6 YECPIC-------GEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             cCcchh-------CCeeccHHHHHHHHHhcC--CcccCCcccceeccccee
Confidence            666666       677777777777777766  566777777766665554

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.70  E-value=4.1e-08  Score=101.63  Aligned_cols=127  Identities=18%  Similarity=0.369  Sum_probs=93.6

Q ss_pred             CceecccccccccChHHHHHHHHhcCC-----C-cccccccccccCCceeeCCCCCccCCCCCCcccCHHHHHHHHhhcc
Q 014855           81 NRFLCEICNKGFQRDQNLQLHRRGHNL-----P-WKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKH  154 (417)
Q Consensus        81 k~~~C~~Cgk~F~~~~~L~~H~~~H~~-----p-~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~  154 (417)
                      ..-.|..|..... ..+|..|......     + ..|+........++.+.|+.|       ++.|. ...|++|++.|+
T Consensus       406 ~~V~C~NC~~~i~-l~~l~lHe~~C~r~~V~Cp~~~Cg~v~~r~el~~H~~C~~C-------gk~f~-~s~LekH~~~~H  476 (567)
T PLN03086        406 DTVECRNCKHYIP-SRSIALHEAYCSRHNVVCPHDGCGIVLRVEEAKNHVHCEKC-------GQAFQ-QGEMEKHMKVFH  476 (567)
T ss_pred             CeEECCCCCCccc-hhHHHHHHhhCCCcceeCCcccccceeeccccccCccCCCC-------CCccc-hHHHHHHHHhcC
Confidence            3457999987765 4567788765431     1 124444444446677899999       89896 678999999986


Q ss_pred             CCCccccCcCCccccChhhHHHHHHH-hCCCceeec-CCCccCC----------chHHHHHHhhcc---ccccccCcccc
Q 014855          155 GEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD-CGKLFSR----------RDSFITHRAFCD---VLAEESARTIT  219 (417)
Q Consensus       155 ~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~-C~k~F~~----------~~~L~~H~~~h~---~~~~~~~~~~~  219 (417)
                        +++.|. ||+.| .+..|..|+++ +.+|++.|. |++.|..          ...|..|...|.   ..|..|++.+.
T Consensus       477 --kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~CG~rt~~C~~Cgk~Vr  552 (567)
T PLN03086        477 --EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESICGSRTAPCDSCGRSVM  552 (567)
T ss_pred             --CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHhcCCcceEccccCCeee
Confidence              889999 99765 67899999998 899999999 9999952          347999998875   34455555444


Q ss_pred             C
Q 014855          220 V  220 (417)
Q Consensus       220 ~  220 (417)
                      .
T Consensus       553 l  553 (567)
T PLN03086        553 L  553 (567)
T ss_pred             e
Confidence            3

>PHA02768 hypothetical protein; Provisional

Probab=98.62  E-value=1.8e-08  Score=71.41  Aligned_cols=44  Identities=18%  Similarity=0.458  Sum_probs=40.0

Q ss_pred             ccccCcCCccccChhhHHHHHHHhCCCceeec-CCCccCCchHHHH
Q 014855          158 KWKCEKCSKKYAVQSDWKAHSKICGTREYKCD-CGKLFSRRDSFIT  202 (417)
Q Consensus       158 p~~C~~C~k~F~~~~~L~~H~~~~~ekp~~C~-C~k~F~~~~~L~~  202 (417)
                      -|.|++|||.|.+.++|..|+++|. ++|+|. |++.|.+++.|+.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~-k~~kc~~C~k~f~~~s~l~~   49 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN-TNLKLSNCKRISLRTGEYIE   49 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC-CcccCCcccceecccceeEE
Confidence            4899999999999999999999965 899999 9999999887753

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=98.58  E-value=1.4e-08  Score=99.01  Aligned_cols=79  Identities=20%  Similarity=0.467  Sum_probs=62.7

Q ss_pred             ceecccccccccChHHHHHHHHhcCCCcccccccccccCCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccC------
Q 014855           82 RFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHG------  155 (417)
Q Consensus        82 ~~~C~~Cgk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~------  155 (417)
                      -|.|..|...|.....|.+|+-.-.             -..-|+|++|       +|.|.--.+|..|+|.|.-      
T Consensus       267 dyiCqLCK~kYeD~F~LAQHrC~RI-------------V~vEYrCPEC-------~KVFsCPANLASHRRWHKPR~eaa~  326 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQHRCPRI-------------VHVEYRCPEC-------DKVFSCPANLASHRRWHKPRPEAAK  326 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhccCCee-------------EEeeecCCcc-------cccccCchhhhhhhcccCCchhhhh
Confidence            4899999999999999999963222             2245999999       9999999999999999961      


Q ss_pred             ---------------------------CCccccCcCCccccChhhHHHHHHH
Q 014855          156 ---------------------------EKKWKCEKCSKKYAVQSDWKAHSKI  180 (417)
Q Consensus       156 ---------------------------ekp~~C~~C~k~F~~~~~L~~H~~~  180 (417)
                                                 +.-|.|.+|+|.|.+...|+.|+-+
T Consensus       327 a~~~P~k~~~~~rae~~ea~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlt  378 (500)
T KOG3993|consen  327 AGSPPPKQAVETRAEVQEAERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLT  378 (500)
T ss_pred             cCCCChhhhhhhhhhhhhccccCCcccCceeecHHhhhhhHHHHHHHHhHHh
Confidence                                       1137788888888888888888654

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.51  E-value=5.5e-08  Score=58.84  Aligned_cols=26  Identities=31%  Similarity=0.824  Sum_probs=23.1

Q ss_pred             HHHHHHhhccCCCccccCcCCccccC
Q 014855          145 GIKKHFSRKHGEKKWKCEKCSKKYAV  170 (417)
Q Consensus       145 ~L~~H~~~H~~ekp~~C~~C~k~F~~  170 (417)
                      +|.+|+++|+|+|||.|++|++.|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            48899999999999999999999864

...

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=98.38  E-value=9.4e-08  Score=93.35  Aligned_cols=85  Identities=19%  Similarity=0.430  Sum_probs=71.2

Q ss_pred             ceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcCCccccChhhHHHHHHHhCCC-----------------
Q 014855          122 KVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKICGTR-----------------  184 (417)
Q Consensus       122 k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~~~ek-----------------  184 (417)
                      ..|.|..|       ...|.+.-.|.+|.-.-...--|+|.+|+|.|.-..+|..|+|+|.-|                 
T Consensus       266 GdyiCqLC-------K~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~  338 (500)
T KOG3993|consen  266 GDYICQLC-------KEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVET  338 (500)
T ss_pred             HHHHHHHH-------HHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhh
Confidence            34999999       889999999999976544444599999999999999999999985211                 


Q ss_pred             -----------------ceeec-CCCccCCchHHHHHHhhccccccc
Q 014855          185 -----------------EYKCD-CGKLFSRRDSFITHRAFCDVLAEE  213 (417)
Q Consensus       185 -----------------p~~C~-C~k~F~~~~~L~~H~~~h~~~~~~  213 (417)
                                       .|.|. |+|.|++...|++|+.+|+.....
T Consensus       339 rae~~ea~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~  385 (500)
T KOG3993|consen  339 RAEVQEAERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLA  385 (500)
T ss_pred             hhhhhhccccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccc
Confidence                             29999 999999999999999999855433

>PHA00616 hypothetical protein

Probab=97.97  E-value=3.2e-06  Score=57.09  Aligned_cols=26  Identities=15%  Similarity=0.202  Sum_probs=14.3

Q ss_pred             CCcccCHHHHHHHHhhccCCCccccC
Q 014855          137 SRALGDLTGIKKHFSRKHGEKKWKCE  162 (417)
Q Consensus       137 ~k~f~~~~~L~~H~~~H~~ekp~~C~  162 (417)
                      |+.|..+..|.+|++.|+|++++.|+
T Consensus         8 G~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          8 GGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             hHHHhhHHHHHHHHHHhcCCCcccee
Confidence            55555555555555555555555554

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.91  E-value=3.2e-06  Score=79.95  Aligned_cols=28  Identities=29%  Similarity=0.631  Sum_probs=24.6

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhh
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSR  152 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~  152 (417)
                      ++|||+|++-||     +|.++...+|+.|+.-
T Consensus       346 d~KpykCpV~gC-----~K~YknqnGLKYH~lh  373 (423)
T COG5189         346 DGKPYKCPVEGC-----NKKYKNQNGLKYHMLH  373 (423)
T ss_pred             cCceecCCCCCc-----hhhhccccchhhhhhc
Confidence            569999999988     9999999999999875

>PHA00732 hypothetical protein

Probab=97.88  E-value=8.8e-06  Score=62.99  Aligned_cols=22  Identities=32%  Similarity=0.449  Sum_probs=13.3

Q ss_pred             eecccccccccChHHHHHHHHh
Q 014855           83 FLCEICNKGFQRDQNLQLHRRG  104 (417)
Q Consensus        83 ~~C~~Cgk~F~~~~~L~~H~~~  104 (417)
                      |.|..||+.|.....|+.|++.
T Consensus         2 y~C~~Cgk~F~s~s~Lk~H~r~   23 (79)
T PHA00732          2 FKCPICGFTTVTLFALKQHARR   23 (79)
T ss_pred             ccCCCCCCccCCHHHHHHHhhc
Confidence            5566666666666666666553

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.87  E-value=1.1e-05  Score=76.47  Aligned_cols=25  Identities=24%  Similarity=0.660  Sum_probs=22.6

Q ss_pred             CCCceeccc--ccccccChHHHHHHHH
Q 014855           79 ATNRFLCEI--CNKGFQRDQNLQLHRR  103 (417)
Q Consensus        79 ~~k~~~C~~--Cgk~F~~~~~L~~H~~  103 (417)
                      ++|+|+|++  |.|.|+....|+.|+.
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~l  372 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHML  372 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhh
Confidence            359999987  9999999999999975

>PHA00732 hypothetical protein

Probab=97.78  E-value=1.8e-05  Score=61.29  Aligned_cols=45  Identities=27%  Similarity=0.417  Sum_probs=36.6

Q ss_pred             eeeCCCCCccCCCCCCcccCHHHHHHHHhh-ccCCCccccCcCCccccChhhHHHHHHH
Q 014855          123 VYVCPEPTCVHHDPSRALGDLTGIKKHFSR-KHGEKKWKCEKCSKKYAVQSDWKAHSKI  180 (417)
Q Consensus       123 ~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~-H~~ekp~~C~~C~k~F~~~~~L~~H~~~  180 (417)
                      +|.|..|       ++.|.....|+.|++. |.+   +.|++||+.|.   .|..|+++
T Consensus         1 py~C~~C-------gk~F~s~s~Lk~H~r~~H~~---~~C~~CgKsF~---~l~~H~~~   46 (79)
T PHA00732          1 MFKCPIC-------GFTTVTLFALKQHARRNHTL---TKCPVCNKSYR---RLNQHFYS   46 (79)
T ss_pred             CccCCCC-------CCccCCHHHHHHHhhcccCC---CccCCCCCEeC---Chhhhhcc
Confidence            4788888       8999999999999885 543   58999999997   57888866

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=97.74  E-value=1.6e-05  Score=48.03  Aligned_cols=25  Identities=36%  Similarity=0.655  Sum_probs=23.0

Q ss_pred             HHHHHHHhcCCCcccccccccccCCceeeCCCCCccCCCCCCccc
Q 014855           97 NLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALG  141 (417)
Q Consensus        97 ~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~f~  141 (417)
                      +|.+|+++|.             ++++|.|++|       ++.|.
T Consensus         1 ~l~~H~~~H~-------------~~k~~~C~~C-------~k~F~   25 (26)
T PF13465_consen    1 NLRRHMRTHT-------------GEKPYKCPYC-------GKSFS   25 (26)
T ss_dssp             HHHHHHHHHS-------------SSSSEEESSS-------SEEES
T ss_pred             CHHHHhhhcC-------------CCCCCCCCCC-------cCeeC
Confidence            5899999999             9999999999       88886

...

>PHA00616 hypothetical protein

Probab=97.72  E-value=1.2e-05  Score=54.37  Aligned_cols=32  Identities=9%  Similarity=0.284  Sum_probs=30.5

Q ss_pred             ccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          158 KWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       158 p~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      ||+|..||+.|..++.|..|++. ||++++.|+
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            68999999999999999999999 999999986

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.68  E-value=2.6e-05  Score=45.44  Aligned_cols=23  Identities=43%  Similarity=0.902  Sum_probs=21.7

Q ss_pred             eecccccccccChHHHHHHHHhc
Q 014855           83 FLCEICNKGFQRDQNLQLHRRGH  105 (417)
Q Consensus        83 ~~C~~Cgk~F~~~~~L~~H~~~H  105 (417)
                      |+|++|++.|.++..|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            78999999999999999999875

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.63  E-value=7e-05  Score=53.68  Aligned_cols=52  Identities=25%  Similarity=0.448  Sum_probs=28.1

Q ss_pred             ceecccccccccChHHHHHHHHhcCCCcccccccccccCCceeeCCCCCccCCCCCCcccCHHHHHHHHhhcc
Q 014855           82 RFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKH  154 (417)
Q Consensus        82 ~~~C~~Cgk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~  154 (417)
                      .|.|++|++ .-+...|..|....+..           ..+.+.|++|       ...+.  .+|.+|+..++
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~-----------~~~~v~CPiC-------~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRS-----------ESKNVVCPIC-------SSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcC-----------CCCCccCCCc-------hhhhh--hHHHHHHHHhc
Confidence            366777777 34456677775443311           2345667766       44332  35666665544

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.30  E-value=0.00018  Score=41.91  Aligned_cols=24  Identities=42%  Similarity=0.899  Sum_probs=20.4

Q ss_pred             eecccccccccChHHHHHHHHhcC
Q 014855           83 FLCEICNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        83 ~~C~~Cgk~F~~~~~L~~H~~~H~  106 (417)
                      |.|++|++.|.+...|+.|+++|+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            789999999999999999998874

...

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.26  E-value=0.00043  Score=49.58  Aligned_cols=47  Identities=19%  Similarity=0.362  Sum_probs=29.6

Q ss_pred             eeCCCCCccCCCCCCcccCHHHHHHHHhh-ccCC-CccccCcCCccccChhhHHHHHHH
Q 014855          124 YVCPEPTCVHHDPSRALGDLTGIKKHFSR-KHGE-KKWKCEKCSKKYAVQSDWKAHSKI  180 (417)
Q Consensus       124 ~~C~~C~C~~~~~~k~f~~~~~L~~H~~~-H~~e-kp~~C~~C~k~F~~~~~L~~H~~~  180 (417)
                      |.|++|       ++ ..+...|..|... |..+ +.+.|++|...+.  .+|..|+..
T Consensus         3 f~CP~C-------~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~   51 (54)
T PF05605_consen    3 FTCPYC-------GK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNS   51 (54)
T ss_pred             cCCCCC-------CC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHH
Confidence            677777       66 3445667777654 3332 4577777776544  367777665

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.25  E-value=0.00016  Score=42.07  Aligned_cols=21  Identities=33%  Similarity=0.820  Sum_probs=10.9

Q ss_pred             cccCcCCccccChhhHHHHHH
Q 014855          159 WKCEKCSKKYAVQSDWKAHSK  179 (417)
Q Consensus       159 ~~C~~C~k~F~~~~~L~~H~~  179 (417)
                      |+|++|++.|.++..|+.|++
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~   21 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMR   21 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHh
Confidence            345555555555555555544

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.17  E-value=0.00027  Score=56.69  Aligned_cols=72  Identities=18%  Similarity=0.421  Sum_probs=18.0

Q ss_pred             ecccccccccChHHHHHHHHhcCCCcccccccccccCCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCc
Q 014855           84 LCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEK  163 (417)
Q Consensus        84 ~C~~Cgk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~  163 (417)
                      +|..|+..|.....|..|+...++             -   ....        ...+.....+..+++... ...+.|.+
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~-------------~---~~~~--------~~~l~~~~~~~~~~~~~~-~~~~~C~~   55 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHG-------------F---DIPD--------QKYLVDPNRLLNYLRKKV-KESFRCPY   55 (100)
T ss_dssp             -------------------------------------------------------------------------SSEEBSS
T ss_pred             Cccccccccccccccccccccccc-------------c---cccc--------cccccccccccccccccc-CCCCCCCc
Confidence            488899999999999999865541             1   1111        112223333333433222 22578888


Q ss_pred             CCccccChhhHHHHHHH
Q 014855          164 CSKKYAVQSDWKAHSKI  180 (417)
Q Consensus       164 C~k~F~~~~~L~~H~~~  180 (417)
                      |++.|.....|..|++.
T Consensus        56 C~~~f~s~~~l~~Hm~~   72 (100)
T PF12756_consen   56 CNKTFRSREALQEHMRS   72 (100)
T ss_dssp             SS-EESSHHHHHHHHHH
T ss_pred             cCCCCcCHHHHHHHHcC
Confidence            88888888888888876

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.10  E-value=0.00033  Score=42.38  Aligned_cols=25  Identities=36%  Similarity=0.699  Sum_probs=23.5

Q ss_pred             ceecccccccccChHHHHHHHHhcC
Q 014855           82 RFLCEICNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        82 ~~~C~~Cgk~F~~~~~L~~H~~~H~  106 (417)
                      +|+|..|++.|.+...|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            5899999999999999999999886

>KOG2231 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]

Probab=96.90  E-value=0.00097  Score=70.40  Aligned_cols=40  Identities=20%  Similarity=0.306  Sum_probs=24.6

Q ss_pred             CCcccCHHHHHHHHhhccCCCccccCcC------CccccChhhHHHHHHH
Q 014855          137 SRALGDLTGIKKHFSRKHGEKKWKCEKC------SKKYAVQSDWKAHSKI  180 (417)
Q Consensus       137 ~k~f~~~~~L~~H~~~H~~ekp~~C~~C------~k~F~~~~~L~~H~~~  180 (417)
                      ...|.....|.+|++.++    |.|..|      +.-|.....|..|.|.
T Consensus       189 ~~~fld~~el~rH~~~~h----~~chfC~~~~~~neyy~~~~dLe~HfR~  234 (669)
T KOG2231|consen  189 HERFLDDDELYRHLRFDH----EFCHFCDYKTGQNEYYNDYDDLEEHFRK  234 (669)
T ss_pred             hhhhccHHHHHHhhccce----eheeecCcccccchhcccchHHHHHhhh
Confidence            666777777777766655    445444      2345566667777665

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=96.79  E-value=0.00073  Score=54.12  Aligned_cols=73  Identities=16%  Similarity=0.252  Sum_probs=21.6

Q ss_pred             eCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcCCccccChhhHHHHHHHhCCCceeec-CCCccCCchHHHHH
Q 014855          125 VCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKICGTREYKCD-CGKLFSRRDSFITH  203 (417)
Q Consensus       125 ~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~~~ekp~~C~-C~k~F~~~~~L~~H  203 (417)
                      +|..|       +..|.....|..|+...++-..-    ..+.+.....+..+++..-...+.|. |++.|.....|..|
T Consensus         1 ~C~~C-------~~~f~~~~~l~~H~~~~H~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~l~~H   69 (100)
T PF12756_consen    1 QCLFC-------DESFSSVDDLLQHMKKKHGFDIP----DQKYLVDPNRLLNYLRKKVKESFRCPYCNKTFRSREALQEH   69 (100)
T ss_dssp             -----------------------------------------------------------SSEEBSSSS-EESSHHHHHHH
T ss_pred             Ccccc-------ccccccccccccccccccccccc----cccccccccccccccccccCCCCCCCccCCCCcCHHHHHHH
Confidence            37777       99999999999999876653211    12223344445555554333479999 99999999999999


Q ss_pred             Hhhcc
Q 014855          204 RAFCD  208 (417)
Q Consensus       204 ~~~h~  208 (417)
                      ++.++
T Consensus        70 m~~~~   74 (100)
T PF12756_consen   70 MRSKH   74 (100)
T ss_dssp             HHHTT
T ss_pred             HcCcc
Confidence            99753

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=96.76  E-value=0.00086  Score=38.88  Aligned_cols=22  Identities=23%  Similarity=0.721  Sum_probs=11.0

Q ss_pred             cccCcCCccccChhhHHHHHHH
Q 014855          159 WKCEKCSKKYAVQSDWKAHSKI  180 (417)
Q Consensus       159 ~~C~~C~k~F~~~~~L~~H~~~  180 (417)
                      |.|++|++.|.+...|+.|+++
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~   22 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRT   22 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHh
Confidence            4555555555555555555544

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=96.69  E-value=0.001  Score=40.25  Aligned_cols=24  Identities=33%  Similarity=0.704  Sum_probs=14.1

Q ss_pred             ceeec-CCCccCCchHHHHHHhhcc
Q 014855          185 EYKCD-CGKLFSRRDSFITHRAFCD  208 (417)
Q Consensus       185 p~~C~-C~k~F~~~~~L~~H~~~h~  208 (417)
                      +|.|. |++.|.....|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            35566 6666666666666665553

>smart00355 ZnF_C2H2 zinc finger

Probab=96.37  E-value=0.0022  Score=37.69  Aligned_cols=24  Identities=33%  Similarity=0.667  Sum_probs=22.1

Q ss_pred             eecccccccccChHHHHHHHHhcC
Q 014855           83 FLCEICNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        83 ~~C~~Cgk~F~~~~~L~~H~~~H~  106 (417)
                      |+|..|++.|.....|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            689999999999999999999774

>KOG1146 consensus Homeobox protein [General function prediction only]

Probab=96.34  E-value=0.003  Score=70.51  Aligned_cols=121  Identities=17%  Similarity=0.207  Sum_probs=77.2

Q ss_pred             CCceecccccccccChHHHHHHHHhcC---CCccccc--------c-cccccCCceeeCCCCCccCCCCCCcccCHHHHH
Q 014855           80 TNRFLCEICNKGFQRDQNLQLHRRGHN---LPWKLKQ--------R-TNKVERKKVYVCPEPTCVHHDPSRALGDLTGIK  147 (417)
Q Consensus        80 ~k~~~C~~Cgk~F~~~~~L~~H~~~H~---~p~~~~~--------~-~~~~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~  147 (417)
                      .|.|+|+.|+..|+....|..|||.-+   ....|+-        + .....+.++|.|..|       ...+..+.+|-
T Consensus       463 ~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C~~C-------~~stttng~Ls  535 (1406)
T KOG1146|consen  463 FKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPCRAC-------NYSTTTNGNLS  535 (1406)
T ss_pred             cccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcccceee-------eeeeecchHHH
Confidence            488999999999999999999999843   1111221        1 111225678889888       88888888888


Q ss_pred             HHHhh--ccC-----------------------------------------CCccccCcCCccccChhhHHHHHHH-hCC
Q 014855          148 KHFSR--KHG-----------------------------------------EKKWKCEKCSKKYAVQSDWKAHSKI-CGT  183 (417)
Q Consensus       148 ~H~~~--H~~-----------------------------------------ekp~~C~~C~k~F~~~~~L~~H~~~-~~e  183 (417)
                      +|+..  |..                                         +-.|.|.+|+..-+-..+|+.|+.. +..
T Consensus       536 ihlqS~~h~~~lee~~~~~g~~v~~~~~~v~s~~P~~ag~~~~ags~~pktkP~~~C~vc~yetniarnlrihmtss~~s  615 (1406)
T KOG1146|consen  536 IHLQSDLHRNELEEAEENAGEQVRLLPASVTSAVPEEAGLGPSAGSSGPKTKPSWRCEVCSYETNIARNLRIHMTASPSS  615 (1406)
T ss_pred             HHHHHHhhHHHHHHHHhccccchhhhhhhhcccCcccccCCCCCCCCCCCCCCCcchhhhcchhhhhhccccccccCCCC
Confidence            88763  210                                         1236677776666666666666665 333


Q ss_pred             C-ceeec-CCCccCCchHHHHHHhhc
Q 014855          184 R-EYKCD-CGKLFSRRDSFITHRAFC  207 (417)
Q Consensus       184 k-p~~C~-C~k~F~~~~~L~~H~~~h  207 (417)
                      . |.-|. |+-.+.....|..+.+.+
T Consensus       616 ~~p~~~Lq~~it~~l~~~~~~~~~lp  641 (1406)
T KOG1146|consen  616 SPPSLVLQQNITSSLASLLGGQGRLP  641 (1406)
T ss_pred             CChHHHhhhcchhhccccccCcCCCC
Confidence            3 25555 655555555555544443

>PRK04860 hypothetical protein; Provisional

Probab=96.12  E-value=0.0033  Score=55.44  Aligned_cols=27  Identities=19%  Similarity=0.580  Sum_probs=14.0

Q ss_pred             HHHHHHHHhhccCCCccccCcCCcccc
Q 014855          143 LTGIKKHFSRKHGEKKWKCEKCSKKYA  169 (417)
Q Consensus       143 ~~~L~~H~~~H~~ekp~~C~~C~k~F~  169 (417)
                      ...+.+|.++|+++++|+|..|++.|.
T Consensus       128 ~~~~rrH~ri~~g~~~YrC~~C~~~l~  154 (160)
T PRK04860        128 QLTVRRHNRVVRGEAVYRCRRCGETLV  154 (160)
T ss_pred             eCHHHHHHHHhcCCccEECCCCCceeE
Confidence            344555555555555555555555544

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.03  E-value=0.004  Score=43.21  Aligned_cols=31  Identities=16%  Similarity=0.279  Sum_probs=18.4

Q ss_pred             CCCccccCcCCccccChhhHHHHHHH-hCCCc
Q 014855          155 GEKKWKCEKCSKKYAVQSDWKAHSKI-CGTRE  185 (417)
Q Consensus       155 ~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp  185 (417)
                      .+.|-.|++|+..+....+|++|+.+ |+.||
T Consensus        21 S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   21 SEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             cCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            45677777777777777777777777 66664

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=95.96  E-value=0.0046  Score=36.51  Aligned_cols=23  Identities=43%  Similarity=0.996  Sum_probs=21.4

Q ss_pred             eecccccccccChHHHHHHHHhc
Q 014855           83 FLCEICNKGFQRDQNLQLHRRGH  105 (417)
Q Consensus        83 ~~C~~Cgk~F~~~~~L~~H~~~H  105 (417)
                      |.|.+|++.|.++..|+.|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            78999999999999999999865

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=95.88  E-value=0.011  Score=59.61  Aligned_cols=145  Identities=19%  Similarity=0.229  Sum_probs=89.6

Q ss_pred             CcCCCCCCCCCCChhhhhcCcc--ccCCC--Cceecc--cccccccChHHHHHHHHhcCCC--cccccc--c--------
Q 014855           54 KKKRSLPGNPDPDAEVIALSPK--SLMAT--NRFLCE--ICNKGFQRDQNLQLHRRGHNLP--WKLKQR--T--------  115 (417)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~--k~~~C~--~Cgk~F~~~~~L~~H~~~H~~p--~~~~~~--~--------  115 (417)
                      ...+..+.........+..+.+  .|..+  +++.|.  .|++.|.+...|.+|...|.+.  .++...  .        
T Consensus       289 ~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  368 (467)
T COG5048         289 PIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKFSPLLN  368 (467)
T ss_pred             CCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccccccccCccccccccC
Confidence            3444455555566666777777  78888  999999  7999999999999999998722  111100  0        


Q ss_pred             ----------ccccCCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCC--ccccCcCCccccChhhHHHHHHHh-C
Q 014855          116 ----------NKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEK--KWKCEKCSKKYAVQSDWKAHSKIC-G  182 (417)
Q Consensus       116 ----------~~~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ek--p~~C~~C~k~F~~~~~L~~H~~~~-~  182 (417)
                                ......+.+.|..-+|     ...+.....+..|...|...+  .+.|..|.+.|.....+..|++.+ .
T Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  443 (467)
T COG5048         369 NEPPQSLQQYKDLKNDKKSETLSNSC-----IRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHKKIHTN  443 (467)
T ss_pred             CCCccchhhccCccCCccccccccch-----hhhhccccccccccccccccCCcCCCCCcchhhccCccccccccccccc
Confidence                      0001122333433333     666666677777777776655  455667888888888888887773 3


Q ss_pred             CCceeecCCCccCCchHHHHH
Q 014855          183 TREYKCDCGKLFSRRDSFITH  203 (417)
Q Consensus       183 ekp~~C~C~k~F~~~~~L~~H  203 (417)
                      ..++.|.+-+.|.....+..|
T Consensus       444 ~~~~~~~~~~~~~~~~~~~~~  464 (467)
T COG5048         444 HAPLLCSILKSFRRDLDLSNH  464 (467)
T ss_pred             CCceeeccccccchhhhhhcc
Confidence            344444444555554444433

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=95.66  E-value=0.014  Score=40.63  Aligned_cols=30  Identities=20%  Similarity=0.356  Sum_probs=21.8

Q ss_pred             cCCCCceecccccccccChHHHHHHHHhcC
Q 014855           77 LMATNRFLCEICNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        77 ~~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~  106 (417)
                      +..+.+-.|++|+..+....+|++|+..++
T Consensus        19 ~~S~~PatCP~C~a~~~~srnLrRHle~~H   48 (54)
T PF09237_consen   19 SQSEQPATCPICGAVIRQSRNLRRHLEIRH   48 (54)
T ss_dssp             CTTS--EE-TTT--EESSHHHHHHHHHHHT
T ss_pred             hccCCCCCCCcchhhccchhhHHHHHHHHh
Confidence            345678999999999999999999998776

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PRK04860 hypothetical protein; Provisional

Probab=95.48  E-value=0.008  Score=53.03  Aligned_cols=38  Identities=24%  Similarity=0.714  Sum_probs=33.0

Q ss_pred             CccccCcCCccccChhhHHHHHHH-hCCCceeec-CCCccCCch
Q 014855          157 KKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD-CGKLFSRRD  198 (417)
Q Consensus       157 kp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~-C~k~F~~~~  198 (417)
                      -+|.|. |++   ....+++|.++ .++++|+|. |++.|....
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~~  157 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFKG  157 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEec
Confidence            469998 998   67889999999 899999999 999987654

>smart00355 ZnF_C2H2 zinc finger

Probab=95.39  E-value=0.0082  Score=35.12  Aligned_cols=22  Identities=32%  Similarity=0.842  Sum_probs=13.4

Q ss_pred             eeec-CCCccCCchHHHHHHhhc
Q 014855          186 YKCD-CGKLFSRRDSFITHRAFC  207 (417)
Q Consensus       186 ~~C~-C~k~F~~~~~L~~H~~~h  207 (417)
                      |.|. |++.|.....|..|++.|
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHh
Confidence            4566 666666666666666544

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=95.29  E-value=0.014  Score=56.31  Aligned_cols=111  Identities=20%  Similarity=0.352  Sum_probs=66.6

Q ss_pred             ceeccc--ccccccChHHHHHHHHhcCCCccccccc------------------cccc-------C-CceeeCCCCCccC
Q 014855           82 RFLCEI--CNKGFQRDQNLQLHRRGHNLPWKLKQRT------------------NKVE-------R-KKVYVCPEPTCVH  133 (417)
Q Consensus        82 ~~~C~~--Cgk~F~~~~~L~~H~~~H~~p~~~~~~~------------------~~~~-------~-~k~~~C~~C~C~~  133 (417)
                      .|.|+.  |..+......|+.|.+..+..+.|..+.                  +.|.       | +..-.|.+|    
T Consensus       151 ~F~CP~skc~~~C~~~k~lk~H~K~~H~~~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~FC----  226 (493)
T COG5236         151 SFKCPKSKCHRRCGSLKELKKHYKAQHGFVLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLCIFC----  226 (493)
T ss_pred             HhcCCchhhhhhhhhHHHHHHHHHhhcCcEEhHhhhcCcccCccceeeeecccccccccCCccccCcCCCchhhhc----
Confidence            478875  7776666788999987765444432211                  0010       0 111257776    


Q ss_pred             CCCCCcccCHHHHHHHHhhccCCCccccCcCCc-------cccChhhHHHHHHHhCCCceeec---C--CC--ccCCchH
Q 014855          134 HDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSK-------KYAVQSDWKAHSKICGTREYKCD---C--GK--LFSRRDS  199 (417)
Q Consensus       134 ~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C~k-------~F~~~~~L~~H~~~~~ekp~~C~---C--~k--~F~~~~~  199 (417)
                         ...|.+...|.+|+|..+.    +|-+|++       -|+.-..|.+|.+.   .-|.|.   |  +|  .|...-.
T Consensus       227 ---~~~FYdDDEL~~HcR~~HE----~ChICD~v~p~~~QYFK~Y~~Le~HF~~---~hy~ct~qtc~~~k~~vf~~~~e  296 (493)
T COG5236         227 ---KIYFYDDDELRRHCRLRHE----ACHICDMVGPIRYQYFKSYEDLEAHFRN---AHYCCTFQTCRVGKCYVFPYHTE  296 (493)
T ss_pred             ---cceecChHHHHHHHHhhhh----hhhhhhccCccchhhhhCHHHHHHHhhc---CceEEEEEEEecCcEEEeccHHH
Confidence               7788888888888776542    3444443       36777777777765   236663   5  23  4666667


Q ss_pred             HHHHHhh
Q 014855          200 FITHRAF  206 (417)
Q Consensus       200 L~~H~~~  206 (417)
                      |..|+..
T Consensus       297 l~~h~~~  303 (493)
T COG5236         297 LLEHLTR  303 (493)
T ss_pred             HHHHHHH
Confidence            7778644

>KOG1146 consensus Homeobox protein [General function prediction only]

Probab=94.91  E-value=0.0059  Score=68.26  Aligned_cols=54  Identities=19%  Similarity=0.307  Sum_probs=40.3

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccC-------------------------CCccccCcCCccccChhhH
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHG-------------------------EKKWKCEKCSKKYAVQSDW  174 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~-------------------------ekp~~C~~C~k~F~~~~~L  174 (417)
                      ..+.|+|+.|       +..|+....|..|||..+-                         .++|.|..|...|..+..|
T Consensus       462 ~~kt~~cpkc-------~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C~~C~~stttng~L  534 (1406)
T KOG1146|consen  462 FFKTLKCPKC-------NWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPCRACNYSTTTNGNL  534 (1406)
T ss_pred             ccccccCCcc-------chhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcccceeeeeeeecchHH
Confidence            4588999999       9999999999999998431                         2456666666666666666


Q ss_pred             HHHHHH
Q 014855          175 KAHSKI  180 (417)
Q Consensus       175 ~~H~~~  180 (417)
                      .+|+..
T Consensus       535 sihlqS  540 (1406)
T KOG1146|consen  535 SIHLQS  540 (1406)
T ss_pred             HHHHHH
Confidence            666653

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=94.67  E-value=0.041  Score=55.36  Aligned_cols=107  Identities=19%  Similarity=0.238  Sum_probs=76.3

Q ss_pred             CceecccccccccChHHHHHHHH--hcCCCcccccccccccCC--ceeeCC--CCCccCCCCCCcccCHHHHHHHHhhcc
Q 014855           81 NRFLCEICNKGFQRDQNLQLHRR--GHNLPWKLKQRTNKVERK--KVYVCP--EPTCVHHDPSRALGDLTGIKKHFSRKH  154 (417)
Q Consensus        81 k~~~C~~Cgk~F~~~~~L~~H~~--~H~~p~~~~~~~~~~~~~--k~~~C~--~C~C~~~~~~k~f~~~~~L~~H~~~H~  154 (417)
                      .++.|..|.+.|.....|.+|.+  .|.             ++  +++.|+  .|       ++.|.....+.+|...|.
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~-------------~~~~~~~~~p~~~~-------~~~~~~~~~~~~~~~~~~  347 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHS-------------GESLKPFSCPYSLC-------GKLFSRNDALKRHILLHT  347 (467)
T ss_pred             cCCCCccccCCccccccccccccccccc-------------cccCCceeeeccCC-------CccccccccccCCccccc
Confidence            57999999999999999999999  787             77  899999  67       999999999999999999


Q ss_pred             CCCccccCc--CCccccChhhH----HHHHH-H-hCCCceeec---CCCccCCchHHHHHHhhc
Q 014855          155 GEKKWKCEK--CSKKYAVQSDW----KAHSK-I-CGTREYKCD---CGKLFSRRDSFITHRAFC  207 (417)
Q Consensus       155 ~ekp~~C~~--C~k~F~~~~~L----~~H~~-~-~~ekp~~C~---C~k~F~~~~~L~~H~~~h  207 (417)
                      +.+++.|..  |.+.+.....-    ..+.. . ...+.+.|.   |...+.+...+..|...+
T Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  411 (467)
T COG5048         348 SISPAKEKLLNSSSKFSPLLNNEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITH  411 (467)
T ss_pred             CCCccccccccCccccccccCCCCccchhhccCccCCccccccccchhhhhccccccccccccc
Confidence            988777744  55544443331    11111 1 334455553   555555555555555444

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=94.64  E-value=0.0088  Score=36.16  Aligned_cols=23  Identities=30%  Similarity=0.816  Sum_probs=20.9

Q ss_pred             eecccccccccChHHHHHHHHhc
Q 014855           83 FLCEICNKGFQRDQNLQLHRRGH  105 (417)
Q Consensus        83 ~~C~~Cgk~F~~~~~L~~H~~~H  105 (417)
                      |.|..|++.|.+...|..|+++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~sk   24 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKSK   24 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTSH
T ss_pred             CCcccCCCCcCCHHHHHHHHccC
Confidence            78999999999999999998753

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=94.15  E-value=0.027  Score=33.09  Aligned_cols=21  Identities=19%  Similarity=0.730  Sum_probs=12.1

Q ss_pred             cccCcCCccccChhhHHHHHH
Q 014855          159 WKCEKCSKKYAVQSDWKAHSK  179 (417)
Q Consensus       159 ~~C~~C~k~F~~~~~L~~H~~  179 (417)
                      |.|.+|++.|.....|+.|++
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~   21 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLR   21 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHT
T ss_pred             CCCCCCCCCcCCHHHHHHHHC
Confidence            445556666666666655554

>KOG4173 consensus Alpha-SNAP protein [Intracellular trafficking, secretion, and vesicular transport]

Probab=93.52  E-value=0.026  Score=50.78  Aligned_cols=81  Identities=21%  Similarity=0.495  Sum_probs=66.1

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcCCccccChhhHHHHHHH-h----------CCCceee
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-C----------GTREYKC  188 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~----------~ekp~~C  188 (417)
                      ....|.|.+-||     -+.|.....+..|..+-++.   .|.+|.+.|.+...|..|+.- |          |..-|.|
T Consensus        76 ~~~~~~cqvagc-----~~~~d~lD~~E~hY~~~h~~---sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~C  147 (253)
T KOG4173|consen   76 RVPAFACQVAGC-----CQVFDALDDYEHHYHTLHGN---SCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQC  147 (253)
T ss_pred             ccccccccccch-----HHHHhhhhhHHHhhhhcccc---hhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHH
Confidence            345688999988     88999998888888765553   899999999999999999865 4          4456999


Q ss_pred             --c-CCCccCCchHHHHHHhhcc
Q 014855          189 --D-CGKLFSRRDSFITHRAFCD  208 (417)
Q Consensus       189 --~-C~k~F~~~~~L~~H~~~h~  208 (417)
                        + |+..|.+...-+.|+-.-|
T Consensus       148 lvEgCt~KFkT~r~RkdH~I~~H  170 (253)
T KOG4173|consen  148 LVEGCTEKFKTSRDRKDHMIRMH  170 (253)
T ss_pred             HHHhhhhhhhhhhhhhhHHHHhc
Confidence              4 9999999999899975433

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=93.37  E-value=0.051  Score=31.67  Aligned_cols=23  Identities=26%  Similarity=0.595  Sum_probs=18.7

Q ss_pred             eecccccccccChHHHHHHHHhcC
Q 014855           83 FLCEICNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        83 ~~C~~Cgk~F~~~~~L~~H~~~H~  106 (417)
                      |+|..|+.... +..|.+|++.|+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            78999998888 889999998864

>KOG2231 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]

Probab=93.17  E-value=0.083  Score=56.21  Aligned_cols=62  Identities=23%  Similarity=0.437  Sum_probs=38.8

Q ss_pred             ceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccC--cCC-ccccChhhHHHHHH----H-hCCCceee
Q 014855          122 KVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCE--KCS-KKYAVQSDWKAHSK----I-CGTREYKC  188 (417)
Q Consensus       122 k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~--~C~-k~F~~~~~L~~H~~----~-~~ekp~~C  188 (417)
                      ..|.|..|.- -..+...|..-..|..|.+.+|    |.|+  .|. +.|.....+..|++    . ..++-|.|
T Consensus       205 ~h~~chfC~~-~~~~neyy~~~~dLe~HfR~~H----flCE~~~C~~~~f~~~~~~ei~lk~~~~~~~~e~~~~~  274 (669)
T KOG2231|consen  205 DHEFCHFCDY-KTGQNEYYNDYDDLEEHFRKGH----FLCEEEFCRTKKFYVAFELEIELKAHNRFIQHEKCYIC  274 (669)
T ss_pred             ceeheeecCc-ccccchhcccchHHHHHhhhcC----ccccccccccceeeehhHHHHHHHhhccccchheeccC
Confidence            3477777731 1112677888899999999877    7776  463 44544444444444    3 55666776

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=93.05  E-value=0.072  Score=31.02  Aligned_cols=16  Identities=25%  Similarity=0.470  Sum_probs=7.1

Q ss_pred             CCcccCHHHHHHHHhhc
Q 014855          137 SRALGDLTGIKKHFSRK  153 (417)
Q Consensus       137 ~k~f~~~~~L~~H~~~H  153 (417)
                      +.... ...|.+|++.|
T Consensus         7 ~y~t~-~~~l~~H~~~~   22 (24)
T PF13909_consen    7 SYSTS-KSNLKRHLKRH   22 (24)
T ss_dssp             S-EES-HHHHHHHHHHH
T ss_pred             CCcCC-HHHHHHHHHhh
Confidence            44444 44455555443

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=92.67  E-value=0.029  Score=33.82  Aligned_cols=22  Identities=27%  Similarity=0.688  Sum_probs=14.2

Q ss_pred             cccCcCCccccChhhHHHHHHH
Q 014855          159 WKCEKCSKKYAVQSDWKAHSKI  180 (417)
Q Consensus       159 ~~C~~C~k~F~~~~~L~~H~~~  180 (417)
                      |.|..|++.|.+...|..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            5566666666666666666553

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG2785 consensus C2H2-type Zn-finger protein [General function prediction only]

Probab=91.63  E-value=0.33  Score=47.92  Aligned_cols=118  Identities=21%  Similarity=0.358  Sum_probs=82.7

Q ss_pred             ceecccccccccChHHHHHHHHhcCCCcccc---------------cc--------cc-cccCCceeeCCCCCccCCCCC
Q 014855           82 RFLCEICNKGFQRDQNLQLHRRGHNLPWKLK---------------QR--------TN-KVERKKVYVCPEPTCVHHDPS  137 (417)
Q Consensus        82 ~~~C~~Cgk~F~~~~~L~~H~~~H~~p~~~~---------------~~--------~~-~~~~~k~~~C~~C~C~~~~~~  137 (417)
                      -|.|.-|...|.....-+.|+++----|-+|               .+        .. ....+.++.|.+|       .
T Consensus         3 ~ftC~tC~v~F~~ad~Qr~HyKSdWHRYNLKRkVA~lPPItaE~F~~k~~s~~~~~~~~~e~~~~~~~c~~c-------~   75 (390)
T KOG2785|consen    3 GFTCNTCNVEFDDADEQRAHYKSDWHRYNLKRKVASLPPITAEEFNEKVLSDDSEKEENLEEAESVVYCEAC-------N   75 (390)
T ss_pred             cceeeceeeeeccHHHHHHHhhhhHHHhhHHhHhhcCCCcCHHHHhHHHhhhhhhhhhhhhhcccceehHHh-------h
Confidence            3899999999999988889987532111111               10        00 1235678999999       9


Q ss_pred             CcccCHHHHHHHHhhcc---------------------------------C-----------------------------
Q 014855          138 RALGDLTGIKKHFSRKH---------------------------------G-----------------------------  155 (417)
Q Consensus       138 k~f~~~~~L~~H~~~H~---------------------------------~-----------------------------  155 (417)
                      +.|........|+....                                 |                             
T Consensus        76 k~~~s~~a~~~hl~Sk~h~~~~~~~~r~~e~d~a~~~q~~~~~p~~l~~~~e~e~~~~E~~~~~d~~~e~~~dd~~Edi~  155 (390)
T KOG2785|consen   76 KSFASPKAHENHLKSKKHVENLSNHQRSEEGDSAKISQLPSRRPSNLQNKGESELKWYEVDSDEDSSEEEEEDDEEEDIE  155 (390)
T ss_pred             ccccChhhHHHHHHHhhcchhhhhhhccccccchhhhhccccCccccccCCCcccchhhcccccccchhhccCcchhhhh
Confidence            99988877777764211                                 0                             


Q ss_pred             --------CCccccCcCCccccChhhHHHHHHH-hCC-----------------------Cceeec-CC---CccCCchH
Q 014855          156 --------EKKWKCEKCSKKYAVQSDWKAHSKI-CGT-----------------------REYKCD-CG---KLFSRRDS  199 (417)
Q Consensus       156 --------ekp~~C~~C~k~F~~~~~L~~H~~~-~~e-----------------------kp~~C~-C~---k~F~~~~~  199 (417)
                              +-|-.|-.|++.|..-..-..||.. ||-                       .-|.|- |.   +.|..-..
T Consensus       156 ~d~~~e~e~~Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~slea  235 (390)
T KOG2785|consen  156 EDGDDEDELIPTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEA  235 (390)
T ss_pred             hccchhcccCCcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHH
Confidence                    0123588899999988888899887 652                       127888 87   88998889


Q ss_pred             HHHHHhh
Q 014855          200 FITHRAF  206 (417)
Q Consensus       200 L~~H~~~  206 (417)
                      .+.||..
T Consensus       236 vr~HM~~  242 (390)
T KOG2785|consen  236 VRAHMRD  242 (390)
T ss_pred             HHHHHhh
Confidence            9999854

>smart00451 ZnF_U1 U1-like zinc finger

Probab=91.11  E-value=0.16  Score=32.29  Aligned_cols=24  Identities=29%  Similarity=0.811  Sum_probs=21.3

Q ss_pred             ceecccccccccChHHHHHHHHhc
Q 014855           82 RFLCEICNKGFQRDQNLQLHRRGH  105 (417)
Q Consensus        82 ~~~C~~Cgk~F~~~~~L~~H~~~H  105 (417)
                      +|.|++|++.|.....+..|++..
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~gk   26 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKGK   26 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHChH
Confidence            589999999999999999998653

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=90.00  E-value=0.24  Score=29.39  Aligned_cols=21  Identities=29%  Similarity=0.672  Sum_probs=17.9

Q ss_pred             eecccccccccChHHHHHHHHh
Q 014855           83 FLCEICNKGFQRDQNLQLHRRG  104 (417)
Q Consensus        83 ~~C~~Cgk~F~~~~~L~~H~~~  104 (417)
                      ..|+.||+.| ....|.+|+++
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            5799999999 67789999864

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=89.46  E-value=0.3  Score=28.97  Aligned_cols=19  Identities=26%  Similarity=0.676  Sum_probs=10.6

Q ss_pred             ccCcCCccccChhhHHHHHH
Q 014855          160 KCEKCSKKYAVQSDWKAHSK  179 (417)
Q Consensus       160 ~C~~C~k~F~~~~~L~~H~~  179 (417)
                      .|..||+.| ..+.|.+|++
T Consensus         4 ~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHHH
Confidence            455666666 4455555554

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=89.24  E-value=0.4  Score=46.62  Aligned_cols=78  Identities=19%  Similarity=0.370  Sum_probs=57.2

Q ss_pred             ecccccccccChHHHHHHHHhcCCCcccccccccccCCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCc
Q 014855           84 LCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEK  163 (417)
Q Consensus        84 ~C~~Cgk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~  163 (417)
                      .|..|.+.|.....|.+|+|.-+              ++.|.|+.-   -.....-|++...|.+|++.-+    |.|.+
T Consensus       222 ~C~FC~~~FYdDDEL~~HcR~~H--------------E~ChICD~v---~p~~~QYFK~Y~~Le~HF~~~h----y~ct~  280 (493)
T COG5236         222 LCIFCKIYFYDDDELRRHCRLRH--------------EACHICDMV---GPIRYQYFKSYEDLEAHFRNAH----YCCTF  280 (493)
T ss_pred             hhhhccceecChHHHHHHHHhhh--------------hhhhhhhcc---CccchhhhhCHHHHHHHhhcCc----eEEEE
Confidence            49999999999999999998765              555555443   2222456888899999988644    67754


Q ss_pred             --CC----ccccChhhHHHHHHH-hC
Q 014855          164 --CS----KKYAVQSDWKAHSKI-CG  182 (417)
Q Consensus       164 --C~----k~F~~~~~L~~H~~~-~~  182 (417)
                        |-    ..|...-.|..|+-. |+
T Consensus       281 qtc~~~k~~vf~~~~el~~h~~~~h~  306 (493)
T COG5236         281 QTCRVGKCYVFPYHTELLEHLTRFHK  306 (493)
T ss_pred             EEEecCcEEEeccHHHHHHHHHHHhh
Confidence              42    467888888999776 64

>smart00451 ZnF_U1 U1-like zinc finger

Probab=86.96  E-value=0.41  Score=30.35  Aligned_cols=23  Identities=22%  Similarity=0.416  Sum_probs=16.7

Q ss_pred             ccccCcCCccccChhhHHHHHHH
Q 014855          158 KWKCEKCSKKYAVQSDWKAHSKI  180 (417)
Q Consensus       158 p~~C~~C~k~F~~~~~L~~H~~~  180 (417)
                      +|.|++|++.|.....+..|++.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            46677777777777777777664

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG2893 consensus Zn finger protein [General function prediction only]

Probab=86.58  E-value=0.2  Score=46.20  Aligned_cols=23  Identities=26%  Similarity=0.653  Sum_probs=16.5

Q ss_pred             ecccccccccChHHHHHHHHhcC
Q 014855           84 LCEICNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        84 ~C~~Cgk~F~~~~~L~~H~~~H~  106 (417)
                      -|=+|++.|..+.-|..|++..+
T Consensus        12 wcwycnrefddekiliqhqkakh   34 (341)
T KOG2893|consen   12 WCWYCNREFDDEKILIQHQKAKH   34 (341)
T ss_pred             eeeecccccchhhhhhhhhhhcc
Confidence            47778888888888887775433

>KOG2482 consensus Predicted C2H2-type Zn-finger protein [Transcription]

Probab=86.17  E-value=1.5  Score=42.67  Aligned_cols=81  Identities=19%  Similarity=0.357  Sum_probs=55.8

Q ss_pred             ceeeCCCCCccCCCCCCcccCHHHHHHHHhhccC----------------------CCccccCcCCccccChhhHHHHHH
Q 014855          122 KVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHG----------------------EKKWKCEKCSKKYAVQSDWKAHSK  179 (417)
Q Consensus       122 k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~----------------------ekp~~C~~C~k~F~~~~~L~~H~~  179 (417)
                      ...+|-+|.      ......++.+..|+-.-++                      -..+.|-.|.|.|+.+..|+.|||
T Consensus       143 fslqClFCn------~e~lgnRs~~l~Hlf~~H~lniGlpDniVyvnelLehLkekL~r~~CLyCekifrdkntLkeHMr  216 (423)
T KOG2482|consen  143 FSLQCLFCN------NEGLGNRSEILEHLFHVHGLNIGLPDNIVYVNELLEHLKEKLERLRCLYCEKIFRDKNTLKEHMR  216 (423)
T ss_pred             eeeEEEEec------chhcccHHHHHHHHHHHhhhccCCCcceeeHHHHHHHHHHHHhhheeeeeccccCCcHHHHHHHH
Confidence            445777772      3345566777777653332                      124678888888988888888888


Q ss_pred             H--hCC-Cc------------------------------------------------------eeec-CCCccCCchHHH
Q 014855          180 I--CGT-RE------------------------------------------------------YKCD-CGKLFSRRDSFI  201 (417)
Q Consensus       180 ~--~~e-kp------------------------------------------------------~~C~-C~k~F~~~~~L~  201 (417)
                      .  |.+ .|                                                      .+|- |....-....|.
T Consensus       217 kK~HrrinPknreYDkfyiINY~ev~ks~t~~~~e~dret~~d~~E~D~~wsDw~ed~a~a~~v~CLfC~~~~en~~~l~  296 (423)
T KOG2482|consen  217 KKRHRRINPKNREYDKFYIINYLEVGKSWTIVHSEDDRETNEDINETDDTWSDWNEDDAEALSVVCLFCTNFYENPVFLF  296 (423)
T ss_pred             hccCcccCCCccccceEEEEeHhhcCCccchhhhhhhhhhhccccccccchhhhhcCCCCccceEEEeeccchhhHHHHH
Confidence            6  311 01                                                      5798 998888888999


Q ss_pred             HHHhhcc
Q 014855          202 THRAFCD  208 (417)
Q Consensus       202 ~H~~~h~  208 (417)
                      .||+..|
T Consensus       297 eHmk~vH  303 (423)
T KOG2482|consen  297 EHMKIVH  303 (423)
T ss_pred             HHHHHHH
Confidence            9998765

>KOG2482 consensus Predicted C2H2-type Zn-finger protein [Transcription]

Probab=85.59  E-value=0.77  Score=44.69  Aligned_cols=78  Identities=19%  Similarity=0.313  Sum_probs=60.8

Q ss_pred             eeeCCCCCccCCCCCCcccCHHHHHHHHhhcc------------------------------------------------
Q 014855          123 VYVCPEPTCVHHDPSRALGDLTGIKKHFSRKH------------------------------------------------  154 (417)
Q Consensus       123 ~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~------------------------------------------------  154 (417)
                      .+.|-.|       .+.|..+..|+.|||...                                                
T Consensus       195 r~~CLyC-------ekifrdkntLkeHMrkK~HrrinPknreYDkfyiINY~ev~ks~t~~~~e~dret~~d~~E~D~~w  267 (423)
T KOG2482|consen  195 RLRCLYC-------EKIFRDKNTLKEHMRKKRHRRINPKNREYDKFYIINYLEVGKSWTIVHSEDDRETNEDINETDDTW  267 (423)
T ss_pred             hheeeee-------ccccCCcHHHHHHHHhccCcccCCCccccceEEEEeHhhcCCccchhhhhhhhhhhccccccccch
Confidence            4789999       999999999999998532                                                


Q ss_pred             ------CCCc--cccCcCCccccChhhHHHHHHH-hCC---------------------------Cceeec-CCCccCCc
Q 014855          155 ------GEKK--WKCEKCSKKYAVQSDWKAHSKI-CGT---------------------------REYKCD-CGKLFSRR  197 (417)
Q Consensus       155 ------~ekp--~~C~~C~k~F~~~~~L~~H~~~-~~e---------------------------kp~~C~-C~k~F~~~  197 (417)
                            +..+  .+|-.|.+.+.+...|..||++ |.-                           +.-.|- |.-.|-..
T Consensus       268 sDw~ed~a~a~~v~CLfC~~~~en~~~l~eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e  347 (423)
T KOG2482|consen  268 SDWNEDDAEALSVVCLFCTNFYENPVFLFEHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKE  347 (423)
T ss_pred             hhhhcCCCCccceEEEeeccchhhHHHHHHHHHHHHHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCc
Confidence                  0011  3799999999999999999997 521                           114466 88899999


Q ss_pred             hHHHHHHhhc
Q 014855          198 DSFITHRAFC  207 (417)
Q Consensus       198 ~~L~~H~~~h  207 (417)
                      ..|..|+.-+
T Consensus       348 ~~l~~hm~e~  357 (423)
T KOG2482|consen  348 PGLLIHMVED  357 (423)
T ss_pred             chhhhhcccc
Confidence            9999998654

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=84.95  E-value=0.42  Score=33.85  Aligned_cols=27  Identities=22%  Similarity=0.580  Sum_probs=16.4

Q ss_pred             cCCCccccCcCCccccChhhHHHHHHH
Q 014855          154 HGEKKWKCEKCSKKYAVQSDWKAHSKI  180 (417)
Q Consensus       154 ~~ekp~~C~~C~k~F~~~~~L~~H~~~  180 (417)
                      .||.-++|+.||..|....+..+|...
T Consensus        13 DGE~~lrCPRC~~~FR~~K~Y~RHVNK   39 (65)
T COG4049          13 DGEEFLRCPRCGMVFRRRKDYIRHVNK   39 (65)
T ss_pred             CCceeeeCCchhHHHHHhHHHHHHhhH
Confidence            345556666666666666666666555

>KOG4173 consensus Alpha-SNAP protein [Intracellular trafficking, secretion, and vesicular transport]

Probab=83.75  E-value=0.52  Score=42.62  Aligned_cols=79  Identities=22%  Similarity=0.429  Sum_probs=63.3

Q ss_pred             CCCceeccc--ccccccChHHHHHHHHhcCCCcccccccccccCCceeeCCCCCccCCCCCCcccCHHHHHHHHhh-cc-
Q 014855           79 ATNRFLCEI--CNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSR-KH-  154 (417)
Q Consensus        79 ~~k~~~C~~--Cgk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~-H~-  154 (417)
                      ....|.|.+  |-..|.....+..|..+-+             +   -.|.+|       .+.|.+..-|..|+.. |. 
T Consensus        76 ~~~~~~cqvagc~~~~d~lD~~E~hY~~~h-------------~---~sCs~C-------~r~~Pt~hLLd~HI~E~HDs  132 (253)
T KOG4173|consen   76 RVPAFACQVAGCCQVFDALDDYEHHYHTLH-------------G---NSCSFC-------KRAFPTGHLLDAHILEWHDS  132 (253)
T ss_pred             ccccccccccchHHHHhhhhhHHHhhhhcc-------------c---chhHHH-------HHhCCchhhhhHHHHHHHHH
Confidence            345688987  8899998888888876544             2   478888       9999999999999764 32 


Q ss_pred             --------CCCcccc--CcCCccccChhhHHHHHHH
Q 014855          155 --------GEKKWKC--EKCSKKYAVQSDWKAHSKI  180 (417)
Q Consensus       155 --------~ekp~~C--~~C~k~F~~~~~L~~H~~~  180 (417)
                              |.-.|.|  +.|+..|++...-+.|+..
T Consensus       133 ~Fqa~veRG~dMy~ClvEgCt~KFkT~r~RkdH~I~  168 (253)
T KOG4173|consen  133 LFQALVERGQDMYQCLVEGCTEKFKTSRDRKDHMIR  168 (253)
T ss_pred             HHHHHHHcCccHHHHHHHhhhhhhhhhhhhhhHHHH
Confidence                    4557999  5599999999999999876

>TIGR00622 ssl1 transcription factor ssl1

Probab=83.20  E-value=1.7  Score=35.78  Aligned_cols=48  Identities=15%  Similarity=0.353  Sum_probs=31.3

Q ss_pred             ccCcCCccccChhhHHHHHHHhCCCceeec-CCCccCCchHHHHHHhhcc
Q 014855          160 KCEKCSKKYAVQSDWKAHSKICGTREYKCD-CGKLFSRRDSFITHRAFCD  208 (417)
Q Consensus       160 ~C~~C~k~F~~~~~L~~H~~~~~ekp~~C~-C~k~F~~~~~L~~H~~~h~  208 (417)
                      .|--|.+.|........- .......|+|. |...|-..-+.-.|...|.
T Consensus        57 ~C~~C~~~f~~~~~~~~~-~~~~~~~y~C~~C~~~FC~dCD~fiHe~Lh~  105 (112)
T TIGR00622        57 FCFGCQGPFPKPPVSPFD-ELKDSHRYVCAVCKNVFCVDCDVFVHESLHC  105 (112)
T ss_pred             cccCcCCCCCCccccccc-ccccccceeCCCCCCccccccchhhhhhccC
Confidence            388888888754321100 01234578898 9988888878788877764

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>KOG2186 consensus Cell growth-regulating nucleolar protein [Cell cycle control, cell division, chromosome partitioning]

Probab=82.78  E-value=0.97  Score=42.28  Aligned_cols=45  Identities=27%  Similarity=0.668  Sum_probs=31.0

Q ss_pred             cccCcCCccccChhhHHHHHHHhCCCceeec-CCCccCCchHHHHHHh
Q 014855          159 WKCEKCSKKYAVQSDWKAHSKICGTREYKCD-CGKLFSRRDSFITHRA  205 (417)
Q Consensus       159 ~~C~~C~k~F~~~~~L~~H~~~~~ekp~~C~-C~k~F~~~~~L~~H~~  205 (417)
                      |.|.+||.... +..+.+|+..+...-|.|- |++.|-+ .+++.|..
T Consensus         4 FtCnvCgEsvK-Kp~vekH~srCrn~~fSCIDC~k~F~~-~sYknH~k   49 (276)
T KOG2186|consen    4 FTCNVCGESVK-KPQVEKHMSRCRNAYFSCIDCGKTFER-VSYKNHTK   49 (276)
T ss_pred             Eehhhhhhhcc-ccchHHHHHhccCCeeEEeeccccccc-chhhhhhh
Confidence            67788877654 3456668777444678887 8888877 56677754

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=82.59  E-value=0.65  Score=32.92  Aligned_cols=32  Identities=16%  Similarity=0.291  Sum_probs=26.2

Q ss_pred             cccCCCCceecccccccccChHHHHHHHHhcC
Q 014855           75 KSLMATNRFLCEICNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        75 ~~~~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~  106 (417)
                      ....++.-+.|+-||+.|.....+.+|...-+
T Consensus        10 ~~RDGE~~lrCPRC~~~FR~~K~Y~RHVNKaH   41 (65)
T COG4049          10 RDRDGEEFLRCPRCGMVFRRRKDYIRHVNKAH   41 (65)
T ss_pred             eccCCceeeeCCchhHHHHHhHHHHHHhhHHh
Confidence            34556777999999999999999999976443

>KOG4167 consensus Predicted DNA-binding protein, contains SANT and ELM2 domains [Transcription]

Probab=81.54  E-value=1.6  Score=46.69  Aligned_cols=27  Identities=30%  Similarity=0.512  Sum_probs=24.7

Q ss_pred             CCceecccccccccChHHHHHHHHhcC
Q 014855           80 TNRFLCEICNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        80 ~k~~~C~~Cgk~F~~~~~L~~H~~~H~  106 (417)
                      ...|.|.+|+|+|-....+..||++|.
T Consensus       790 ~giFpCreC~kvF~KiKSrNAHMK~Hr  816 (907)
T KOG4167|consen  790 TGIFPCRECGKVFFKIKSRNAHMKTHR  816 (907)
T ss_pred             CceeehHHHHHHHHHHhhhhHHHHHHH
Confidence            346999999999999999999999997

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=81.42  E-value=2.1  Score=35.05  Aligned_cols=23  Identities=22%  Similarity=0.572  Sum_probs=21.1

Q ss_pred             eee----c-CCCccCCchHHHHHHhhcc
Q 014855          186 YKC----D-CGKLFSRRDSFITHRAFCD  208 (417)
Q Consensus       186 ~~C----~-C~k~F~~~~~L~~H~~~h~  208 (417)
                      |.|    . |+..+.....+.+|.+.+|
T Consensus        81 ~~C~~~~~~C~y~~~~~~~m~~H~~~~H  108 (109)
T PF12013_consen   81 YRCQCDPPHCGYITRSKKTMRKHWRKEH  108 (109)
T ss_pred             eeeecCCCCCCcEeccHHHHHHHHHHhc
Confidence            999    8 9999999999999998776

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>KOG2893 consensus Zn finger protein [General function prediction only]

Probab=80.80  E-value=0.5  Score=43.64  Aligned_cols=42  Identities=26%  Similarity=0.377  Sum_probs=29.1

Q ss_pred             eCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcCCccccChhhHHHH
Q 014855          125 VCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAH  177 (417)
Q Consensus       125 ~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H  177 (417)
                      -|.+|       ++.|.+..-|..|.+.    |.|+|.+|.|..-+--.|..|
T Consensus        12 wcwyc-------nrefddekiliqhqka----khfkchichkkl~sgpglsih   53 (341)
T KOG2893|consen   12 WCWYC-------NREFDDEKILIQHQKA----KHFKCHICHKKLFSGPGLSIH   53 (341)
T ss_pred             eeeec-------ccccchhhhhhhhhhh----ccceeeeehhhhccCCCceee
Confidence            47777       8888887777777665    348888887766555555555

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	417
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	4e-10
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	4e-07
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	2e-08
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	7e-07
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-08
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	4e-08
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	7e-07
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	4e-08
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	8e-07
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-07
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	4e-07
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	4e-07
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	6e-07
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	6e-07
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	1e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-06
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-06
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	7e-04
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-06
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	1e-04
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-06
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	4e-06
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	4e-06
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	5e-06
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-05
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	6e-06
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	6e-06
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	6e-06
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	6e-06
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	7e-06
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-05
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	8e-05
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-05
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-05
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	3e-05
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	3e-05
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	4e-04
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	6e-05
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	9e-05
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	7e-05
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	3e-04
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-04
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	2e-04
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	3e-04
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	3e-04
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	3e-04
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	4e-04

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 56.4 bits (137), Expect = 4e-10
 Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 26/128 (20%)

Query: 83  FLCE--ICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRAL 140
           F+C    CNK + +  +LQ+H R H         T +    K Y C    C      R  
Sbjct: 7   FMCAYPGCNKRYFKLSHLQMHSRKH---------TGE----KPYQCDFKDC-----ERRF 48

Query: 141 GDLTGIKKHFSRKH-GEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKC---DCGKLFS 195
                +K+H  R+H G K ++C+ C +K++     K H++   G + + C    C K F+
Sbjct: 49  SRSDQLKRH-QRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFA 107

Query: 196 RRDSFITH 203
           R D  + H
Sbjct: 108 RSDELVRH 115

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 47.5 bits (114), Expect = 4e-07
 Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 11/88 (12%)

Query: 122 KVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKH-GEKKWKCEK--CSKKYAVQSDWKAHS 178
           + ++C  P C     ++    L+ ++ H SRKH GEK ++C+   C ++++     K H 
Sbjct: 5   RPFMCAYPGC-----NKRYFKLSHLQMH-SRKHTGEKPYQCDFKDCERRFSRSDQLKRHQ 58

Query: 179 KI-CGTREYKCD-CGKLFSRRDSFITHR 204
           +   G + ++C  C + FSR D   TH 
Sbjct: 59  RRHTGVKPFQCKTCQRKFSRSDHLKTHT 86

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 53.0 bits (128), Expect = 2e-08
 Identities = 31/126 (24%), Positives = 39/126 (30%), Gaps = 26/126 (20%)

Query: 86  EICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTG 145
           E C KGF    +L  H   H               +K + C    C              
Sbjct: 48  EGCEKGFTSLHHLTRHSLTHT-------------GEKNFTCDSDGC-----DLRFTTKAN 89

Query: 146 IKKHFSRKHGEKKW--KC--EKCSKKYAVQSDWKAHSKI-CGTREYKC---DCGKLFSRR 197
           +KKHF+R H  K     C  E C K +   +  K H         Y+C    C K FS  
Sbjct: 90  MKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLP 149

Query: 198 DSFITH 203
                H
Sbjct: 150 SRLKRH 155

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 48.4 bits (116), Expect = 7e-07
 Identities = 30/134 (22%), Positives = 50/134 (37%), Gaps = 32/134 (23%)

Query: 82  RFLCEI--CNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRA 139
           R++C    C   + ++  LQ H   H         T     +K + C E  C      + 
Sbjct: 12  RYICSFADCGAAYNKNWKLQAHLCKH---------TG----EKPFPCKEEGC-----EKG 53

Query: 140 LGDLTGIKKHFSRKH-GEKKWKCE--KCSKKYAVQSDWKAHSKICGTRE----YKC---D 189
              L  + +H S  H GEK + C+   C  ++  +++ K H            Y C   +
Sbjct: 54  FTSLHHLTRH-SLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNR-FHNIKICVYVCHFEN 111

Query: 190 CGKLFSRRDSFITH 203
           CGK F + +    H
Sbjct: 112 CGKAFKKHNQLKVH 125

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 51.8 bits (125), Expect = 2e-08
 Identities = 33/127 (25%), Positives = 47/127 (37%), Gaps = 27/127 (21%)

Query: 85  CEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLT 144
           C    + F+    L +H R H         T +    K + C    C      ++   L 
Sbjct: 42  CSRELRPFKAQYMLVVHMRRH---------TGE----KPHKCTFEGC-----RKSYSRLE 83

Query: 145 GIKKHFSRKH-GEKKWKCE--KCSKKYAVQSDWKAHSKICGTRE--YKCD---CGKLFSR 196
            +K H  R H GEK + CE   CSK ++  SD   H     + E  Y C    C K ++ 
Sbjct: 84  NLKTH-LRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTD 142

Query: 197 RDSFITH 203
             S   H
Sbjct: 143 PSSLRKH 149

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 51.4 bits (124), Expect = 4e-08
 Identities = 30/128 (23%), Positives = 43/128 (33%), Gaps = 20/128 (15%)

Query: 83  FLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGD 142
              + C++ F   + L  H           +  +     K +VC           R    
Sbjct: 4   CRWDGCSQEFDSQEQLVHHIN--------SEHIHGER--KEFVCHW--GGCSRELRPFKA 51

Query: 143 LTGIKKHFSRKH-GEKKWKC--EKCSKKYAVQSDWKAHSKI-CGTREYKC---DCGKLFS 195
              +  H  R+H GEK  KC  E C K Y+   + K H +   G + Y C    C K FS
Sbjct: 52  QYMLVVHM-RRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFS 110

Query: 196 RRDSFITH 203
                  H
Sbjct: 111 NASDRAKH 118

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 47.6 bits (114), Expect = 7e-07
 Identities = 28/96 (29%), Positives = 42/96 (43%), Gaps = 21/96 (21%)

Query: 88  CNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIK 147
           C K + R +NL+ H R H         T     +K Y+C    C     S+A  + +   
Sbjct: 75  CRKSYSRLENLKTHLRSH---------TG----EKPYMCEHEGC-----SKAFSNASDRA 116

Query: 148 KHFSRKH-GEKKWKCEK--CSKKYAVQSDWKAHSKI 180
           KH +R H  EK + C+   C+K+Y   S  + H K 
Sbjct: 117 KHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKT 152

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 50.6 bits (122), Expect = 4e-08
 Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 10/88 (11%)

Query: 120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSK 179
             +   CP   C     ++   D + ++KH    HG +   C +C K +   S  K H  
Sbjct: 2   EPRTIACPHKGC-----TKMFRDNSAMRKH-LHTHGPRVHVCAECGKAFVESSKLKRHQL 55

Query: 180 I-CGTREYKC---DCGKLFSRRDSFITH 203
           +  G + ++C    CGK FS   +  TH
Sbjct: 56  VHTGEKPFQCTFEGCGKRFSLDFNLRTH 83

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 46.7 bits (112), Expect = 8e-07
 Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 29/126 (23%)

Query: 85  CEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLT 144
            + C K F+ +  ++ H   H                +V+VC E  C      +A  + +
Sbjct: 10  HKGCTKMFRDNSAMRKHLHTHG--------------PRVHVCAE--C-----GKAFVESS 48

Query: 145 GIKKHFSRKH-GEKKWKC--EKCSKKYAVQSDWKAHSKI-CGTREYKC---DCGKLFSRR 197
            +K+H    H GEK ++C  E C K++++  + + H +I  G R Y C    C K F++ 
Sbjct: 49  KLKRHQ-LVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQS 107

Query: 198 DSFITH 203
            +  +H
Sbjct: 108 TNLKSH 113

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 47.5 bits (114), Expect = 2e-07
 Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 9/86 (10%)

Query: 122 KVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKH-GEKKWKCEKCSKKYAVQSDWKAHSKI 180
           + Y CP  +C      R       + +H  R H G+K ++C  C + ++       H + 
Sbjct: 3   RPYACPVESC-----DRRFSQSGSLTRH-IRIHTGQKPFQCRICMRNFSRSDHLTTHIRT 56

Query: 181 -CGTREYKCD-CGKLFSRRDSFITHR 204
             G + + CD CG+ F+R D    H 
Sbjct: 57  HTGEKPFACDICGRKFARSDERKRHT 82

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 46.7 bits (112), Expect = 4e-07
 Identities = 18/69 (26%), Positives = 27/69 (39%), Gaps = 11/69 (15%)

Query: 148 KHFSR-----KH-----GEKKWKCEKCSKKYAVQSDWKAHSKICGTREYKCD-CGKLFSR 196
           ++FSR      H     GEK + C+ C +K+A   + K H  I        D   +L S+
Sbjct: 11  RNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDKVEELLSK 70

Query: 197 RDSFITHRA 205
                   A
Sbjct: 71  NYHLENEVA 79

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 46.0 bits (110), Expect = 4e-07
 Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 5/58 (8%)

Query: 152 RKH-GEKKWKCEKCSKKYAVQSDWKAHSKIC---GTREYKC-DCGKLFSRRDSFITHR 204
               GE  ++C+ CS+ Y   S++  H         + Y C  C K F+R+D+   H 
Sbjct: 3   FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHV 60

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 45.6 bits (109), Expect = 6e-07
 Identities = 12/57 (21%), Positives = 22/57 (38%), Gaps = 3/57 (5%)

Query: 152 RKH-GEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD-CGKLFSRRDSFITHRA 205
                    KC +CS   + ++  + H +I C  R +KC+ C     +  +   H  
Sbjct: 2   SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMK 58

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 46.5 bits (111), Expect = 6e-07
 Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 11/97 (11%)

Query: 113 QRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKH-GEKKWKC--EKCSKKYA 169
                +E+++++ C  P C     ++     + +K H  R H GEK +KC  E C  ++A
Sbjct: 5   SSGPDLEKRRIHYCDYPGC-----TKVYTKSSHLKAHL-RTHTGEKPYKCTWEGCDWRFA 58

Query: 170 VQSDWKAHSKI-CGTREYKCD-CGKLFSRRDSFITHR 204
              +   H +   G + ++C  C + FSR D    H 
Sbjct: 59  RSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHM 95

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 39.9 bits (94), Expect = 1e-04
 Identities = 21/101 (20%), Positives = 36/101 (35%), Gaps = 22/101 (21%)

Query: 83  FLCEI--CNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRAL 140
             C+   C K + +  +L+ H R H               +K Y C    C         
Sbjct: 16  HYCDYPGCTKVYTKSSHLKAHLRTHT-------------GEKPYKCTWEGC-----DWRF 57

Query: 141 GDLTGIKKHFSRKH-GEKKWKCEKCSKKYAVQSDWKAHSKI 180
                + +H+ RKH G K ++C  C++ ++       H K 
Sbjct: 58  ARSDELTRHY-RKHTGAKPFQCGVCNRSFSRSDHLALHMKR 97

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.9 bits (118), Expect = 1e-06
 Identities = 35/252 (13%), Positives = 71/252 (28%), Gaps = 68/252 (26%)

Query: 66  DAEV--IALSPKSLMATNRFLCEICNKG---FQR--DQNLQLHRRGHNLPW---KLKQRT 115
             E+  I +S  ++  T R    + +K     Q+  ++ L++     N  +    +K   
Sbjct: 48  KEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRI-----NYKFLMSPIKTEQ 102

Query: 116 NKVERK-KVYV-CPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSD 173
            +     ++Y+   +    ++D           K + SR   +   K  +     A+   
Sbjct: 103 RQPSMMTRMYIEQRDRL--YNDNQVF------AKYNVSRL--QPYLKLRQ-----ALLEL 147

Query: 174 WKAHSKIC-----GTREYKCDCGKLFSRRDSFITHRAFCDVLAEESARTITVNPLFSPSQ 228
            +    +      G        GK                 +A +   +  V        
Sbjct: 148 -RPAKNVLIDGVLG-------SGK---------------TWVALDVCLSYKV-------- 176

Query: 229 QQPNSSATHMLNFPSHHHHQLQSQGLQALQLQAVKIEDNNQQHHIPPWLACPSSIDLSSQ 288
           Q         LN  + +  +   + LQ L  Q      +   H     L   S      +
Sbjct: 177 QCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRR 236

Query: 289 LFSGNIFSRSLL 300
           L     +   LL
Sbjct: 237 LLKSKPYENCLL 248

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 44.7 bits (106), Expect = 2e-06
 Identities = 14/55 (25%), Positives = 21/55 (38%), Gaps = 5/55 (9%)

Query: 155 GEKKWKCEKCSKKYAVQSDWKAHSKI----CGTREYKCD-CGKLFSRRDSFITHR 204
           G    +CE C      ++    H +          + C+ CGK F + DS   HR
Sbjct: 4   GSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHR 58

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 37.0 bits (86), Expect = 7e-04
 Identities = 14/98 (14%), Positives = 23/98 (23%), Gaps = 45/98 (45%)

Query: 83  FLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGD 142
             CEIC    ++  +L  H+R H                                     
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKH------------------------------------- 30

Query: 143 LTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI 180
                   +      ++ CE C K++       AH   
Sbjct: 31  --------AETVAALRFPCEFCGKRFEKPDSVAAHRSK 60

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 46.1 bits (110), Expect = 2e-06
 Identities = 28/129 (21%), Positives = 42/129 (32%), Gaps = 21/129 (16%)

Query: 83  FLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPS-RALG 141
              + C++ F     L  H                   +  +VC    C     S +A  
Sbjct: 26  RPKKSCDRTFSTMHELVTHVTME---------HVGGPEQNNHVCYWEECPREGKSFKAKY 76

Query: 142 DLTGIKKHFSRKH-GEKKWKC--EKCSKKYAVQSDWKAHSKI-CGTREYKC---DCGKLF 194
            L     H  R H GEK + C    C K +A   + K H +   G + +KC    C + F
Sbjct: 77  KL---VNH-IRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRF 132

Query: 195 SRRDSFITH 203
           +       H
Sbjct: 133 ANSSDRKKH 141

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 41.5 bits (98), Expect = 1e-04
 Identities = 29/109 (26%), Positives = 40/109 (36%), Gaps = 23/109 (21%)

Query: 85  CEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLT 144
           C    K F+    L  H R H         T +    K + CP P C      +      
Sbjct: 65  CPREGKSFKAKYKLVNHIRVH---------TGE----KPFPCPFPGC-----GKIFARSE 106

Query: 145 GIKKHFSRKH-GEKKWKC--EKCSKKYAVQSDWKAHSKI-CGTREYKCD 189
            +K H  R H GEK +KC  E C +++A  SD K H  +    +     
Sbjct: 107 NLKIH-KRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS 154

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 44.0 bits (105), Expect = 2e-06
 Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 4/63 (6%)

Query: 145 GIKKHFSRKH-GEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKC-DCGKLFSRRDSFI 201
           G     S  H GEK + C +C K ++  S    H ++  G + YKC +CGK FS+    I
Sbjct: 1   GSSGS-SGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLI 59

Query: 202 THR 204
            H+
Sbjct: 60  NHQ 62

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 43.6 bits (104), Expect = 4e-06
 Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 3/56 (5%)

Query: 152 RKH-GEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKC-DCGKLFSRRDSFITHR 204
                +K +KC++C   +  + +  +H  +  G + Y+C  CG  F+R  +  TH 
Sbjct: 10  HMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHT 65

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 45.9 bits (110), Expect = 4e-06
 Identities = 40/133 (30%), Positives = 56/133 (42%), Gaps = 44/133 (33%)

Query: 85  CEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLT 144
           C  C K F   ++L  H+R H               +K Y CPE  C             
Sbjct: 52  CPECGKSFSDKKDLTRHQRTHT-------------GEKPYKCPE--C------------- 83

Query: 145 GIKKHFSRK-----H-----GEKKWKCEKCSKKYAVQSDWKAHSKICGTRE--YKC-DCG 191
              K FS++     H     GEK + C +C K ++  +  +AH +   T E  YKC +CG
Sbjct: 84  --GKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRT-HTGEKPYKCPECG 140

Query: 192 KLFSRRDSFITHR 204
           K FSR D+  TH+
Sbjct: 141 KSFSREDNLHTHQ 153

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 45.9 bits (110), Expect = 5e-06
 Identities = 41/131 (31%), Positives = 56/131 (42%), Gaps = 42/131 (32%)

Query: 85  CEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLT 144
           C  C K F +  NL+ H+R H               +K Y CPE  C             
Sbjct: 80  CPECGKSFSQRANLRAHQRTHT-------------GEKPYACPE--C------------- 111

Query: 145 GIKKHFSRK---------H-GEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKC-DCGK 192
           G  K FS+          H GEK +KC +C K ++ + +   H +   G + YKC +CGK
Sbjct: 112 G--KSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGK 169

Query: 193 LFSRRDSFITH 203
            FSRRD+   H
Sbjct: 170 SFSRRDALNVH 180

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 44.7 bits (107), Expect = 1e-05
 Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 24/122 (19%)

Query: 85  CEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLT 144
           C  C K F R  +L  H+R H               +K Y CPE  C      ++  D  
Sbjct: 24  CPECGKSFSRSDHLAEHQRTHT-------------GEKPYKCPE--C-----GKSFSDKK 63

Query: 145 GIKKHFSRKH-GEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKC-DCGKLFSRRDSFI 201
            + +H  R H GEK +KC +C K ++ +++ +AH +   G + Y C +CGK FS+     
Sbjct: 64  DLTRH-QRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLR 122

Query: 202 TH 203
            H
Sbjct: 123 AH 124

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 43.2 bits (103), Expect = 6e-06
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 3/55 (5%)

Query: 152 RKH-GEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKC-DCGKLFSRRDSFITH 203
            +    +++KC++C K ++  SD   H +   G + YKC +CGK F +R   I H
Sbjct: 11  WQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGH 65

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 42.9 bits (102), Expect = 6e-06
 Identities = 13/62 (20%), Positives = 22/62 (35%), Gaps = 6/62 (9%)

Query: 147 KKHFSRKH-GEKKWKCEKCSKKYAVQSDWKAHSKI---CGTREYKCD-CGKLFSRRDSFI 201
                R H GEK ++C  C  ++      K H          ++ C  C  + +R+    
Sbjct: 4   GSS-GRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62

Query: 202 TH 203
            H
Sbjct: 63  VH 64

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 43.2 bits (103), Expect = 6e-06
 Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 3/55 (5%)

Query: 152 RKH-GEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKC-DCGKLFSRRDSFITH 203
             H   + + C+ C K++  +SD K H+ I  G + +KC  CGK FS+  + ITH
Sbjct: 22  LIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITH 76

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 43.6 bits (104), Expect = 6e-06
 Identities = 20/69 (28%), Positives = 24/69 (34%), Gaps = 12/69 (17%)

Query: 148 KHFSRK---------H-GEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKC-DCGKLFS 195
           K FSRK         H G K +KC+ C    A  S    H +I    R +KC  C     
Sbjct: 16  KCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASR 75

Query: 196 RRDSFITHR 204
                  H 
Sbjct: 76  NSSQLTVHL 84

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 43.6 bits (104), Expect = 7e-06
 Identities = 14/52 (26%), Positives = 20/52 (38%), Gaps = 2/52 (3%)

Query: 155 GEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKC-DCGKLFSRRDSFITHR 204
                KCE C K ++ +   K H +   G + YKC  C    +   S   H 
Sbjct: 5   SSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHL 56

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 43.6 bits (104), Expect = 1e-05
 Identities = 27/134 (20%), Positives = 45/134 (33%), Gaps = 45/134 (33%)

Query: 85  CEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLT 144
           C  C+K F     L++H R H               +K + CP+  C             
Sbjct: 10  CPTCHKKFLSKYYLKVHNRKHT-------------GEKPFECPK--C------------- 41

Query: 145 GIKKHFSRK-----H--------GEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKC-D 189
              K + RK     H         E+ + C  C + +  + + + H     G   YKC  
Sbjct: 42  --GKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSS 99

Query: 190 CGKLFSRRDSFITH 203
           C + F ++    +H
Sbjct: 100 CSQQFMQKKDLQSH 113

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 41.0 bits (97), Expect = 8e-05
 Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 2/51 (3%)

Query: 155 GEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKC-DCGKLFSRRDSFITH 203
           G    +C  C KK+  +   K H++   G + ++C  CGK + R+++ + H
Sbjct: 4   GSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEH 54

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 43.2 bits (103), Expect = 1e-05
 Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 12/69 (17%)

Query: 148 KHFSRK---------H-GEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKC-DCGKLFS 195
           +HF++          H  E+ + C+ C K +  Q   + H  I    + +KC +CGK F 
Sbjct: 25  RHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFC 84

Query: 196 RRDSFITHR 204
           +  +   H+
Sbjct: 85  QSRTLAVHK 93

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 42.4 bits (101), Expect = 2e-05
 Identities = 14/56 (25%), Positives = 23/56 (41%), Gaps = 3/56 (5%)

Query: 152 RKH-GEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKC-DCGKLFSRRDSFITHR 204
                +K++ C+ C + +    +   H +     R Y C  C K F R+D    HR
Sbjct: 10  LPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHR 65

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 41.4 bits (98), Expect = 3e-05
 Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 7/59 (11%)

Query: 152 RKH-GEKKWKCEKCSKKYAVQSDWKAHSKI-----CGTREYKC-DCGKLFSRRDSFITH 203
           R H GEK + C  C K +  +     H K           + C  CGK F+RR++   H
Sbjct: 8   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARH 66

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 41.4 bits (98), Expect = 3e-05
 Identities = 17/57 (29%), Positives = 22/57 (38%), Gaps = 4/57 (7%)

Query: 152 RKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD---CGKLFSRRDSFITHR 204
           ++          C K Y   S  KAH +   G + Y CD   CG  F+R D    H 
Sbjct: 1   KRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHY 57

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 38.3 bits (90), Expect = 4e-04
 Identities = 24/91 (26%), Positives = 37/91 (40%), Gaps = 11/91 (12%)

Query: 119 ERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKH-GEKKWKC--EKCSKKYAVQSDWK 175
           +R   + C    C      +     + +K H  R H GEK + C  + C  K+A   +  
Sbjct: 1   KRTATHTCDYAGC-----GKTYTKSSHLKAHL-RTHTGEKPYHCDWDGCGWKFARSDELT 54

Query: 176 AHSKI-CGTREYKCD-CGKLFSRRDSFITHR 204
            H +   G R ++C  C + FSR D    H 
Sbjct: 55  RHYRKHTGHRPFQCQKCDRAFSRSDHLALHM 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 40.3 bits (95), Expect = 6e-05
 Identities = 20/96 (20%), Positives = 34/96 (35%), Gaps = 20/96 (20%)

Query: 85  CEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLT 144
            E C K F++   L++H+  H         T     +  Y CP   C      +     +
Sbjct: 6   FENCGKAFKKHNQLKVHQFSH---------TQ----QLPYECPHEGC-----DKRFSLPS 47

Query: 145 GIKKHFSRKH-GEKKWKCEKCSKKYAVQSDWKAHSK 179
            +K+H  + H G    K + CS      + +  H  
Sbjct: 48  RLKRHE-KVHAGYPCKKDDSCSFVGKTWTLYLKHVA 82

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 39.9 bits (94), Expect = 9e-05
 Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 11/87 (12%)

Query: 123 VYVCPEPTCVHHDPSRALGDLTGIKKHFSRKH-GEKKWKC--EKCSKKYAVQSDWKAHSK 179
           +YVC    C      +A      +K H    H  +  ++C  E C K++++ S  K H K
Sbjct: 1   MYVCHFENC-----GKAFKKHNQLKVH-QFSHTQQLPYECPHEGCDKRFSLPSRLKRHEK 54

Query: 180 I-CGTREYKCD-CGKLFSRRDSFITHR 204
           +  G    K D C  +      ++ H 
Sbjct: 55  VHAGYPCKKDDSCSFVGKTWTLYLKHV 81

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 40.6 bits (96), Expect = 7e-05
 Identities = 15/51 (29%), Positives = 18/51 (35%), Gaps = 2/51 (3%)

Query: 155 GEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKC-DCGKLFSRRDSFITH 203
           G     CE C K +        H     G + Y C  CG  F R+D    H
Sbjct: 4   GSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYH 54

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 38.6 bits (91), Expect = 3e-04
 Identities = 17/58 (29%), Positives = 22/58 (37%), Gaps = 7/58 (12%)

Query: 152 RKH-GEKKWKCEKCSKKYAVQSDWKAHSKICGTRE----YKC-DCGKLFSRRDSFITH 203
             H GEK + C  C  ++  +     H +          Y C  CGK FSR D    H
Sbjct: 28  LSHSGEKPYSCPVCGLRFKRKDRMSYHVRS-HDGSVGKPYICQSCGKGFSRPDHLNGH 84

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 40.1 bits (95), Expect = 1e-04
 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 4/56 (7%)

Query: 151 SRKH-GEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKC-DCGKLFSRRDSFITH 203
           S    G+K + C+ C K +  +S    H  +  G R Y C  CGK F  +   + H
Sbjct: 2   SSGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGH 56

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 39.7 bits (94), Expect = 2e-04
 Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 12/68 (17%)

Query: 148 KHFSRK---------H-GEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKC-DCGKLFS 195
           K F+ K         H G + + C  C KK+ ++     H KI  G + Y+C  C K F 
Sbjct: 17  KSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFM 76

Query: 196 RRDSFITH 203
            RDSF  H
Sbjct: 77  WRDSFHRH 84

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 75

 Score = 38.4 bits (89), Expect = 3e-04
 Identities = 16/67 (23%), Positives = 23/67 (34%), Gaps = 3/67 (4%)

Query: 143 LTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKICGTREYKCD-CGKLFSRRDSFI 201
            +G   H   +   +   C+ C  +       K H   CG R   C  CG+    +D   
Sbjct: 2   SSGSSGHEETECPLRLAVCQHCDLEL-SILKLKEHEDYCGARTELCGNCGRNVLVKD-LK 59

Query: 202 THRAFCD 208
           TH   C 
Sbjct: 60  THPEVCG 66

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 38.3 bits (90), Expect = 3e-04
 Identities = 11/57 (19%), Positives = 19/57 (33%), Gaps = 7/57 (12%)

Query: 155 GEKKWKC--EKCSKKYAVQSDWKAHSKICGTRE--YKCD---CGKLFSRRDSFITHR 204
           G     C    C + ++ +     H K     +  + C    CGK F+ +     H 
Sbjct: 4   GSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHM 60

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 37.9 bits (89), Expect = 3e-04
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 2/46 (4%)

Query: 160 KCEKCSKKYAVQSDWKAHSKI-CGTREYKC-DCGKLFSRRDSFITH 203
            CE C++ +A Q   K H +     + Y C  C + F+RRD  I H
Sbjct: 4   VCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRH 49

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 37.2 bits (87), Expect = 4e-04
 Identities = 11/44 (25%), Positives = 16/44 (36%), Gaps = 3/44 (6%)

Query: 155 GEKKWKCEKCSKKYAVQSDWKAHSKICGTRE--YKCD-CGKLFS 195
             K + C+ C K ++       H K   T E  +KC       S
Sbjct: 9   VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	417
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.89
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.89
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.89
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.88
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.88
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.86
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.85
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.84
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.82
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.81
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.8
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.78
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.77
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.77
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.75
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.73
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.73
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.73
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.72
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.72
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.71
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.71
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.71
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.71
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.71
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.7
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.7
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.7
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.69
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.69
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.67
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.65
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.64
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.63
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.62
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.62
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.62
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.61
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.6
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.59
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.57
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.56
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.54
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.54
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.53
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.53
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.52
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.49
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.48
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.47
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.47
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.47
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.46
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.45
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.44
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.43
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.42
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.41
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.4
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.39
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.38
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.37
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.37
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.35
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.34
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.34
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.33
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.31
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.3
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.29
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.28
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.27
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.26
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.23
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.21
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.2
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.2
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.18
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.16
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.13
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.12
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.09
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.08
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.06
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.06
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.06
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.06
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.05
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.05
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.05
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.05
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.05
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.05
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.04
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.04
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.04
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.04
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.04
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.04
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.04
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.03
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.03
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.03
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.03
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.03
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.03
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.03
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.03
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.03
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.02
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.02
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.02
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.02
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.02
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.02
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.02
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.01
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.01
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.01
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.0
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.0
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.0
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.0
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.0
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.0
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.0
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.0
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.99
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.99
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.99
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.99
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.98
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.98
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.98
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.98
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.96
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.96
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.96
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.96
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.96
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.96
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.95
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.95
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.95
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.95
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.95
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.95
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.95
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.95
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.94
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.94
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.94
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.94
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.94
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.94
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.94
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.94
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.94
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.94
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.94
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.94
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.93
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.93
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.93
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.93
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.93
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.93
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.93
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.92
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.92
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.92
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.92
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.92
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.92
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.92
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.92
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.92
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.92
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.92
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.91
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.91
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.91
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.91
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.91
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.91
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.91
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.91
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.91
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.9
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.9
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.9
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.9
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.9
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.9
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.9
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.9
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.9
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.9
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.9
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.9
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.9
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.9
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.89
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.89
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.89
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.89
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.89
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.89
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.89
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.89
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.89
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.89
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.89
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.88
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.88
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.88
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.87
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.87
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.87
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.86
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.86
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.86
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.86
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.86
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.86
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.86
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.85
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.85
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.85
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.85
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.83
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.82
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.81
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.81
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.79
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.78
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.78
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.78
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.78
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.78
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.78
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.78
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.78
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.78
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.77
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.77
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.77
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.77
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.77
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.77
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.76
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.76
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.76
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.76
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.76
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.76
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.75
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.75
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.75
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.75
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.75
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.74
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.74
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.73
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.73
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.73
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.72
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.72
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.72
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.72
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.71
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.71
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.71
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.7
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.7
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.7
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.7
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.7
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.69
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.69
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.69
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.69
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.68
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.68
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.67
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.66
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.66
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.65
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.64
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.63
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.62
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.6
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.58
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.56
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.48
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.47
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.47
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.39
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.36
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.34
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.32
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.3
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.3
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.3
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.29
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.27
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.23
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.22
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.2
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.19
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.18
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.17
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.17
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.17
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.17
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.16
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.16
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.15
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.15
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.14
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.11
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.11
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.1
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.09
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.07
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.07
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.06
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.06
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.03
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.02
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.01
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	97.99
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	97.98
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.97
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.94
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.94
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	97.93
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.93
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.92
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.89
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	97.86
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.06
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.84
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.81
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.81
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.81
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.8
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	97.78
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.77
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	96.97
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.75
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	96.94
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.74
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.72
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.72
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.7
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.66
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.65
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.63
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.6
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.6
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.59
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.59
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	96.74
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.57
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.52
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.51
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.48
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	96.58
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	96.54
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.4
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.34
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	96.93
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	96.87
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.62
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.83
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	95.66
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.55
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.16
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	94.56
4b8c_D	727	Glucose-repressible alcohol dehydrogenase transcr	94.4
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	93.75
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	92.1
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	83.52
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	82.82
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	82.6
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	82.6
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	82.17
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	81.6

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.89  E-value=5.1e-24  Score=192.00  Aligned_cols=150  Identities=27%  Similarity=0.554  Sum_probs=109.1

Q ss_pred             CCcCCCCCCCCCCChhhhhcCccccCCCCceecccccccccChHHHHHHHHhcC--CCccccccc-------------cc
Q 014855           53 SKKKRSLPGNPDPDAEVIALSPKSLMATNRFLCEICNKGFQRDQNLQLHRRGHN--LPWKLKQRT-------------NK  117 (417)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~--~p~~~~~~~-------------~~  117 (417)
                      +...+..++..+.....+..+.+.+.++++|.|.+|++.|.....|..|+++|.  .++.|..+.             ..
T Consensus        20 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   99 (190)
T 2i13_A           20 KPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRT   99 (190)
T ss_dssp             -----------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHH
T ss_pred             CCCcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHHHHHHh
Confidence            446777888888888999999999999999999999999999999999999987  345554332             22


Q ss_pred             ccCCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec-CCCccC
Q 014855          118 VERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD-CGKLFS  195 (417)
Q Consensus       118 ~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~-C~k~F~  195 (417)
                      +.++++|.|.+|       ++.|.....|..|+++|+++++|.|.+|++.|.....|..|+++ +++++|.|. |++.|.
T Consensus       100 h~~~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~  172 (190)
T 2i13_A          100 HTGEKPYACPEC-------GKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFS  172 (190)
T ss_dssp             HHTCCCEECTTT-------CCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEES
T ss_pred             cCCCCCCcCCCC-------CCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECCCCCCccC
Confidence            346677888887       88888888888888888888888888888888888888888888 778888888 888888


Q ss_pred             CchHHHHHHhhccc
Q 014855          196 RRDSFITHRAFCDV  209 (417)
Q Consensus       196 ~~~~L~~H~~~h~~  209 (417)
                      .+..|.+|+++|+.
T Consensus       173 ~~~~L~~H~~~H~~  186 (190)
T 2i13_A          173 RRDALNVHQRTHTG  186 (190)
T ss_dssp             SHHHHHHHHTTC--
T ss_pred             CHHHHHHHHHhcCC
Confidence            88888888887753

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.89  E-value=1.4e-23  Score=189.19  Aligned_cols=144  Identities=27%  Similarity=0.561  Sum_probs=104.6

Q ss_pred             hhcCccccCCCCceecccccccccChHHHHHHHHhcC--CCccccccc-------------ccccCCceeeCCCCCccCC
Q 014855           70 IALSPKSLMATNRFLCEICNKGFQRDQNLQLHRRGHN--LPWKLKQRT-------------NKVERKKVYVCPEPTCVHH  134 (417)
Q Consensus        70 ~~~~~~~~~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~--~p~~~~~~~-------------~~~~~~k~~~C~~C~C~~~  134 (417)
                      +..+...+.++++|.|++|++.|.....|..|+++|.  .++.|..+.             ..+.++++|.|++|     
T Consensus         9 l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C-----   83 (190)
T 2i13_A            9 SVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPEC-----   83 (190)
T ss_dssp             ----------------------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTT-----
T ss_pred             chhhhhhcCCCCCCcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCccc-----
Confidence            3345566778899999999999999999999999997  466665433             23457788999999     


Q ss_pred             CCCCcccCHHHHHHHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec-CCCccCCchHHHHHHhhcc----
Q 014855          135 DPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD-CGKLFSRRDSFITHRAFCD----  208 (417)
Q Consensus       135 ~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~-C~k~F~~~~~L~~H~~~h~----  208 (417)
                        ++.|.....|..|++.|+++++|.|.+|++.|.....|..|+++ +++++|.|. |++.|..+..|.+|+++|.    
T Consensus        84 --~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~  161 (190)
T 2i13_A           84 --GKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKP  161 (190)
T ss_dssp             --CCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCC
T ss_pred             --CCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCC
Confidence              99999999999999999999999999999999999999999999 899999999 9999999999999999986    


Q ss_pred             ccccccCccccC
Q 014855          209 VLAEESARTITV  220 (417)
Q Consensus       209 ~~~~~~~~~~~~  220 (417)
                      ..+..|+..|..
T Consensus       162 ~~C~~C~~~f~~  173 (190)
T 2i13_A          162 YKCPECGKSFSR  173 (190)
T ss_dssp             EECTTTCCEESS
T ss_pred             eECCCCCCccCC
Confidence            355666666543

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.89  E-value=3.5e-23  Score=171.72  Aligned_cols=110  Identities=29%  Similarity=0.692  Sum_probs=105.0

Q ss_pred             CCCCceeccc--ccccccChHHHHHHHHhcCCCcccccccccccCCceeeCC--CCCccCCCCCCcccCHHHHHHHHhhc
Q 014855           78 MATNRFLCEI--CNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCP--EPTCVHHDPSRALGDLTGIKKHFSRK  153 (417)
Q Consensus        78 ~~~k~~~C~~--Cgk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~--~C~C~~~~~~k~f~~~~~L~~H~~~H  153 (417)
                      .++++|.|.+  |++.|.....|..|+++|.             ++++|.|.  .|       ++.|.....|..|++.|
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~~~C-------~~~f~~~~~l~~H~~~h   61 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHT-------------GEKPYQCDFKDC-------ERRFSRSDQLKRHQRRH   61 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHH-------------TTCCEECCSTTC-------CCEESSHHHHHHHHHHH
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhC-------------CCCCccCCCCCC-------cCccCCHHHHHHHHHHc
Confidence            4578999997  9999999999999999998             78999999  67       99999999999999999


Q ss_pred             cCCCccccCcCCccccChhhHHHHHHH-hCCCceee--c-CCCccCCchHHHHHHhhc
Q 014855          154 HGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKC--D-CGKLFSRRDSFITHRAFC  207 (417)
Q Consensus       154 ~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C--~-C~k~F~~~~~L~~H~~~h  207 (417)
                      +++++|.|.+|++.|.....|..|+++ +++++|.|  + |++.|..+..|.+|+++|
T Consensus        62 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           62 TGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             CCCCCccCCccCchhCCHHHHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            999999999999999999999999999 89999999  8 999999999999999876

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.88  E-value=1.9e-23  Score=178.42  Aligned_cols=107  Identities=20%  Similarity=0.362  Sum_probs=99.3

Q ss_pred             ccccCCCCceecccccccccChHHHHHHHHhcCCCcccccccccccCCceeeCCCCCccCCCCCCcccCHHHHHHHHhhc
Q 014855           74 PKSLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRK  153 (417)
Q Consensus        74 ~~~~~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H  153 (417)
                      ...+.++++|+|++||+.|.....|.+|+++|.             ++++|.|++|       ++.|.....|..|+++|
T Consensus        14 ~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~-------------~~k~~~C~~C-------~k~F~~~~~L~~H~~~H   73 (133)
T 2lt7_A           14 ELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHS-------------WEKKYPCRYC-------EKVFPLAEYRTKHEIHH   73 (133)
T ss_dssp             EEEETTEEEEEETTTCCEESCHHHHHHHHHHHH-------------CCSCEECSSS-------SCEESSHHHHHHHHHHH
T ss_pred             eeecCCCcCeECCCCCCCcCCHHHHHHHHHHcC-------------CCCCeeCCcc-------Ceecccccchhhhcccc
Confidence            456788999999999999999999999999998             8999999999       99999999999999999


Q ss_pred             cCCCccccCcCCccccChhhHHHHHHH-hCC------Cceeec-CCCccCCchHH
Q 014855          154 HGEKKWKCEKCSKKYAVQSDWKAHSKI-CGT------REYKCD-CGKLFSRRDSF  200 (417)
Q Consensus       154 ~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~e------kp~~C~-C~k~F~~~~~L  200 (417)
                      +++++|.|.+||+.|.....|..|+++ |++      ++|+|. |++.|......
T Consensus        74 ~~~k~~~C~~C~k~F~~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~~~~h  128 (133)
T 2lt7_A           74 TGERRYQCLACGKSFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQYAY  128 (133)
T ss_dssp             HTCCCEEESSSCCEESSHHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCCCCCHH
T ss_pred             CCCccccCCCCCCCcCCHHHHHHHhHHhcCCCCCCCCCCeecCCCCchhhhcccc
Confidence            999999999999999999999999999 776      459999 99999876543

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.88  E-value=7.9e-23  Score=170.66  Aligned_cols=112  Identities=21%  Similarity=0.494  Sum_probs=105.2

Q ss_pred             CCCCceecccccccccChHHHHHHHHhcCCCcccccccccccCCceeeCCCCCccCCCCCCcccCHHHHHHHHhh---cc
Q 014855           78 MATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSR---KH  154 (417)
Q Consensus        78 ~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~---H~  154 (417)
                      .++++|+|++|++.|.....|..|+++|.             ++++|.|.+|       ++.|.....|.+|++.   |.
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~C-------~~~f~~~~~l~~H~~~~~~~~   62 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHT-------------GEKPFECPKC-------GKCYFRKENLLEHEARNCMNR   62 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHS-------------SCCSCBCTTT-------CCBCSSHHHHHHHHHHCCCCS
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCC-------------CCCCeECCCC-------CchhcCHHHHHHHHhhhhcCC
Confidence            45788999999999999999999999998             8899999999       9999999999999995   57


Q ss_pred             CCCccccCcCCccccChhhHHHHHHH-hCCCceeec-CCCccCCchHHHHHHhhccc
Q 014855          155 GEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD-CGKLFSRRDSFITHRAFCDV  209 (417)
Q Consensus       155 ~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~-C~k~F~~~~~L~~H~~~h~~  209 (417)
                      ++++|.|.+|++.|.....|..|+++ +++++|.|. |++.|..+..|.+|++.+|.
T Consensus        63 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~  119 (124)
T 2dlq_A           63 SEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHS  119 (124)
T ss_dssp             CCCCEECSSSCCEESSHHHHHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSS
T ss_pred             CCCCeECCCCCCccCCHHHHHHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCC
Confidence            89999999999999999999999999 899999999 99999999999999986553

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.86  E-value=1.1e-21  Score=164.06  Aligned_cols=111  Identities=27%  Similarity=0.574  Sum_probs=101.6

Q ss_pred             CCCceecc--cccccccChHHHHHHHHhcCCCcccccccccccCCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCC
Q 014855           79 ATNRFLCE--ICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGE  156 (417)
Q Consensus        79 ~~k~~~C~--~Cgk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~e  156 (417)
                      ++++|.|+  .|++.|.+...|..|+++|              ++++|.|.+|       ++.|.....|..|++.|+++
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h--------------~~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~   60 (124)
T 1ubd_C            2 EPRTIACPHKGCTKMFRDNSAMRKHLHTH--------------GPRVHVCAEC-------GKAFVESSKLKRHQLVHTGE   60 (124)
T ss_dssp             ---CEECCSTTCCCEESSHHHHHHHHGGG--------------SCCCEECTTT-------CCEESSHHHHHHHGGGTSCC
T ss_pred             CCCcccCCCCCCcCccCCHHHHHHHHHHc--------------CCCCeECCCC-------CchhCCHHHHHHHHHHcCCC
Confidence            46789999  8999999999999999988              3688999999       99999999999999999999


Q ss_pred             CccccCc--CCccccChhhHHHHHHH-hCCCceee--c-CCCccCCchHHHHHHhhcccc
Q 014855          157 KKWKCEK--CSKKYAVQSDWKAHSKI-CGTREYKC--D-CGKLFSRRDSFITHRAFCDVL  210 (417)
Q Consensus       157 kp~~C~~--C~k~F~~~~~L~~H~~~-~~ekp~~C--~-C~k~F~~~~~L~~H~~~h~~~  210 (417)
                      ++|.|.+  |++.|.....|..|+++ +++++|.|  + |++.|.++..|.+|+++|...
T Consensus        61 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~  120 (124)
T 1ubd_C           61 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKA  120 (124)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC--
T ss_pred             CCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHccc
Confidence            9999986  99999999999999999 89999999  6 999999999999999998643

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.85  E-value=2.6e-21  Score=174.17  Aligned_cols=147  Identities=20%  Similarity=0.289  Sum_probs=127.2

Q ss_pred             CCCcCC--CCCCCCCCChhhhhcCccccCCCCceec--ccccccccChHHHHHHHHhcCCCcccccccccccCCceeeCC
Q 014855           52 PSKKKR--SLPGNPDPDAEVIALSPKSLMATNRFLC--EICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCP  127 (417)
Q Consensus        52 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~k~~~C--~~Cgk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~  127 (417)
                      .+...+  ..++..+.....+..+.+.|.++++|.|  ++|++.|.....|..|+++|.             ++++|.|.
T Consensus        10 ~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~   76 (190)
T 1tf6_A           10 YKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHT-------------GEKNFTCD   76 (190)
T ss_dssp             CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTT-------------TCCCEECC
T ss_pred             CcceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHcc-------------CCCceeCC
Confidence            344555  5788889999999999999999999999  889999999999999999998             78999999


Q ss_pred             --CCCccCCCCCCcccCHHHHHHHH-hhc-cCCCcccc--CcCCccccChhhHHHHHHH-hCCCceee--c-CCCccCCc
Q 014855          128 --EPTCVHHDPSRALGDLTGIKKHF-SRK-HGEKKWKC--EKCSKKYAVQSDWKAHSKI-CGTREYKC--D-CGKLFSRR  197 (417)
Q Consensus       128 --~C~C~~~~~~k~f~~~~~L~~H~-~~H-~~ekp~~C--~~C~k~F~~~~~L~~H~~~-~~ekp~~C--~-C~k~F~~~  197 (417)
                        .|       ++.|.....|.+|+ +.| .++++|.|  .+|++.|.....|..|+++ +++++|.|  + |++.|..+
T Consensus        77 ~~~C-------~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~  149 (190)
T 1tf6_A           77 SDGC-------DLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLP  149 (190)
T ss_dssp             SSSC-------CCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSH
T ss_pred             CCCC-------CCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCH
Confidence              67       99999999999999 566 46889999  8899999999999999999 78999999  5 99999999


Q ss_pred             hHHHHHHhhccc-cccc---cCccc
Q 014855          198 DSFITHRAFCDV-LAEE---SARTI  218 (417)
Q Consensus       198 ~~L~~H~~~h~~-~~~~---~~~~~  218 (417)
                      ..|.+|+++|.. .+..   |+..+
T Consensus       150 ~~L~~H~~~H~~~~C~~~~~C~~~f  174 (190)
T 1tf6_A          150 SRLKRHEKVHAGYPCKKDDSCSFVG  174 (190)
T ss_dssp             HHHHHHHTSSCSCCCCSTTTCCCCC
T ss_pred             HHHHHHHHHhCCCcCCCCCcCCCcc
Confidence            999999999874 3334   54444

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.84  E-value=2.5e-21  Score=168.18  Aligned_cols=133  Identities=23%  Similarity=0.386  Sum_probs=116.1

Q ss_pred             CCCCCCCCCCChhhhhcCcc---ccCCCCceecccc-----cccccChHHHHHHHHhcCCCcccccccccccCCceeeCC
Q 014855           56 KRSLPGNPDPDAEVIALSPK---SLMATNRFLCEIC-----NKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCP  127 (417)
Q Consensus        56 ~~~~~~~~~~~~~~~~~~~~---~~~~~k~~~C~~C-----gk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~  127 (417)
                      ++..++..+.....+..+.+   .+.++++|.|.+|     ++.|.....|..|+++|.             ++++|.|.
T Consensus         5 ~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~-------------~~~~~~C~   71 (155)
T 2gli_A            5 RWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHT-------------GEKPHKCT   71 (155)
T ss_dssp             CBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHH-------------CCCCCCCC
T ss_pred             CcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcC-------------CCCCccCC
Confidence            45567777888888888876   6788888988753     488999999999999988             78899998


Q ss_pred             C--CCccCCCCCCcccCHHHHHHHHhhccCCCccccCc--CCccccChhhHHHHH-HH-hCCCceeec---CCCccCCch
Q 014855          128 E--PTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEK--CSKKYAVQSDWKAHS-KI-CGTREYKCD---CGKLFSRRD  198 (417)
Q Consensus       128 ~--C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~--C~k~F~~~~~L~~H~-~~-~~ekp~~C~---C~k~F~~~~  198 (417)
                      +  |       ++.|.....|..|+++|+++++|.|.+  |++.|.+...|..|+ ++ .++++|.|.   |++.|.++.
T Consensus        72 ~~~C-------~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~  144 (155)
T 2gli_A           72 FEGC-------RKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPS  144 (155)
T ss_dssp             STTC-------CCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHH
T ss_pred             CCCC-------CCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHH
Confidence            6  7       999999999999999999999999998  999999999999998 56 678999994   999999999


Q ss_pred             HHHHHHhhcc
Q 014855          199 SFITHRAFCD  208 (417)
Q Consensus       199 ~L~~H~~~h~  208 (417)
                      .|.+|+++|+
T Consensus       145 ~L~~H~~~hh  154 (155)
T 2gli_A          145 SLRKHVKTVH  154 (155)
T ss_dssp             HHHHHHHHSC
T ss_pred             HHHHHHHhhc
Confidence            9999999886

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.82  E-value=1.8e-20  Score=163.04  Aligned_cols=120  Identities=20%  Similarity=0.326  Sum_probs=102.7

Q ss_pred             CCCCceecccccccccChHHHHHHHHh-cCCCcccccccccccCCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCC
Q 014855           78 MATNRFLCEICNKGFQRDQNLQLHRRG-HNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGE  156 (417)
Q Consensus        78 ~~~k~~~C~~Cgk~F~~~~~L~~H~~~-H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~e  156 (417)
                      .+.+.|.|.+|++.|.+...|.+|++. |......     .......|.|.+|       ++.|.....|..|+++|+++
T Consensus        21 ~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~-----~~~~~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~   88 (155)
T 2rpc_A           21 EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQ-----NNHVCYWEECPRE-------GKSFKAKYKLVNHIRVHTGE   88 (155)
T ss_dssp             TTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTC-----SSCCCCBTTCTTS-------SCCCSSHHHHHHHTHHHHCC
T ss_pred             hhhcccccccCCcccCCHHHHHHHHHhhcCCCccc-----CCccccccCCCCc-------ccccCCHHHHHHHHHhcCCC
Confidence            345789999999999999999999998 5411000     0000122789999       99999999999999999999


Q ss_pred             CccccCc--CCccccChhhHHHHHHH-hCCCceeec---CCCccCCchHHHHHHhhccc
Q 014855          157 KKWKCEK--CSKKYAVQSDWKAHSKI-CGTREYKCD---CGKLFSRRDSFITHRAFCDV  209 (417)
Q Consensus       157 kp~~C~~--C~k~F~~~~~L~~H~~~-~~ekp~~C~---C~k~F~~~~~L~~H~~~h~~  209 (417)
                      ++|.|.+  |++.|.....|.+|+++ +++++|.|.   |++.|.++..|.+|+++|+.
T Consensus        89 ~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~  147 (155)
T 2rpc_A           89 KPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTS  147 (155)
T ss_dssp             CSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTS
T ss_pred             CcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcC
Confidence            9999998  99999999999999999 889999997   99999999999999999864

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.81  E-value=4.9e-20  Score=159.97  Aligned_cols=125  Identities=25%  Similarity=0.453  Sum_probs=108.7

Q ss_pred             CCceecccccccccChHHHHHHHH---hcCCCcccccccccccCCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCC
Q 014855           80 TNRFLCEICNKGFQRDQNLQLHRR---GHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGE  156 (417)
Q Consensus        80 ~k~~~C~~Cgk~F~~~~~L~~H~~---~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~e  156 (417)
                      +.+|+|+.|++.|.+...|..|++   +|.             ++++|.|.+|+|  ..|++.|.....|.+|++.|+++
T Consensus         1 E~~~~C~~C~~~f~~~~~L~~H~~~~h~h~-------------~~~~~~C~~c~C--~~c~~~f~~~~~l~~H~~~h~~~   65 (155)
T 2gli_A            1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHG-------------ERKEFVCHWGGC--SRELRPFKAQYMLVVHMRRHTGE   65 (155)
T ss_dssp             CCBCCBTTCCCBCSCHHHHHHHHHHHTSSS-------------CSSCCCCCBTTC--TTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCcCCcCCCccccCCHHHHHHHHHhhccCC-------------CCcceeCCCCCc--cchhhhhhhHHHHHHHHHhcCCC
Confidence            357999999999999999999998   565             789999998765  34469999999999999999999


Q ss_pred             CccccCc--CCccccChhhHHHHHHH-hCCCceeec---CCCccCCchHHHHHH-hhccc----cccc--cCcccc
Q 014855          157 KKWKCEK--CSKKYAVQSDWKAHSKI-CGTREYKCD---CGKLFSRRDSFITHR-AFCDV----LAEE--SARTIT  219 (417)
Q Consensus       157 kp~~C~~--C~k~F~~~~~L~~H~~~-~~ekp~~C~---C~k~F~~~~~L~~H~-~~h~~----~~~~--~~~~~~  219 (417)
                      ++|.|.+  |++.|.....|..|+++ +++++|.|.   |++.|.++..|.+|+ +.|..    .+..  |+..|.
T Consensus        66 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~  141 (155)
T 2gli_A           66 KPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYT  141 (155)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEES
T ss_pred             CCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccC
Confidence            9999985  99999999999999999 889999997   999999999999998 67752    3443  555553

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.80  E-value=1.7e-19  Score=162.27  Aligned_cols=135  Identities=21%  Similarity=0.393  Sum_probs=121.3

Q ss_pred             CcCC--CCCCCCCCChhhhhcCccccCCCCceecc--cccccccChHHHHHHH-HhcCCCcccccccccccCCceeeC--
Q 014855           54 KKKR--SLPGNPDPDAEVIALSPKSLMATNRFLCE--ICNKGFQRDQNLQLHR-RGHNLPWKLKQRTNKVERKKVYVC--  126 (417)
Q Consensus        54 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~k~~~C~--~Cgk~F~~~~~L~~H~-~~H~~p~~~~~~~~~~~~~k~~~C--  126 (417)
                      ...+  ..++..+.....+..+.+.|.++++|.|.  .|++.|.+...|..|+ +.|..            ++++|.|  
T Consensus        42 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~------------~~~~~~C~~  109 (190)
T 1tf6_A           42 PFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNI------------KICVYVCHF  109 (190)
T ss_dssp             SSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSST------------TTSCCEECS
T ss_pred             CccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCC------------CcceeeCCC
Confidence            3456  67899999999999999999999999999  8999999999999999 66631            5789999  


Q ss_pred             CCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCc--CCccccChhhHHHHHHHhCCCceeec----CCCccCCchHH
Q 014855          127 PEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEK--CSKKYAVQSDWKAHSKICGTREYKCD----CGKLFSRRDSF  200 (417)
Q Consensus       127 ~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~--C~k~F~~~~~L~~H~~~~~ekp~~C~----C~k~F~~~~~L  200 (417)
                      ..|       ++.|.....|..|+++|+++++|.|.+  |++.|.....|..|+++|..  |.|.    |++.|..+..|
T Consensus       110 ~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~--~~C~~~~~C~~~f~~~~~l  180 (190)
T 1tf6_A          110 ENC-------GKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG--YPCKKDDSCSFVGKTWTLY  180 (190)
T ss_dssp             SSS-------CEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS--CCCCSTTTCCCCCSCHHHH
T ss_pred             CCC-------ccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC--CcCCCCCcCCCccccHHHH
Confidence            888       999999999999999999999999988  99999999999999999433  7773    99999999999


Q ss_pred             HHHHhhccc
Q 014855          201 ITHRAFCDV  209 (417)
Q Consensus       201 ~~H~~~h~~  209 (417)
                      .+|+++|+.
T Consensus       181 ~~H~~~h~~  189 (190)
T 1tf6_A          181 LKHVAECHQ  189 (190)
T ss_dssp             HHHHTTCC-
T ss_pred             HHHHHhhcC
Confidence            999999863

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.78  E-value=8.2e-20  Score=155.79  Aligned_cols=85  Identities=27%  Similarity=0.503  Sum_probs=81.7

Q ss_pred             cCCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec-CCCccCC
Q 014855          119 ERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD-CGKLFSR  196 (417)
Q Consensus       119 ~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~-C~k~F~~  196 (417)
                      .|+++|.|++|       ++.|.....|.+|+++|+++++|.|.+|++.|.....|..|+++ .|+++|.|+ |++.|..
T Consensus        18 ~Gek~y~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~   90 (133)
T 2lt7_A           18 DGRVYYICIVC-------KRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFIN   90 (133)
T ss_dssp             TTEEEEEETTT-------CCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESS
T ss_pred             CCCcCeECCCC-------CCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCC
Confidence            39999999999       99999999999999999999999999999999999999999999 799999999 9999999


Q ss_pred             chHHHHHHhhcccc
Q 014855          197 RDSFITHRAFCDVL  210 (417)
Q Consensus       197 ~~~L~~H~~~h~~~  210 (417)
                      +..|..|++.|+..
T Consensus        91 ~~~L~~H~~~hh~~  104 (133)
T 2lt7_A           91 YQFMSSHIKSVHSQ  104 (133)
T ss_dssp             HHHHHHHHHHHTCC
T ss_pred             HHHHHHHhHHhcCC
Confidence            99999999998743

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.77  E-value=9.7e-19  Score=142.08  Aligned_cols=91  Identities=23%  Similarity=0.527  Sum_probs=85.3

Q ss_pred             CCCCceecccccccccChHHHHHHHHhcCCCcccccccccccCCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCC
Q 014855           78 MATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEK  157 (417)
Q Consensus        78 ~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ek  157 (417)
                      ..+++|.|.+|++.|.....|..|+++|.             ++++|.|.+|       ++.|.....|.+|+++|++++
T Consensus        13 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~~   72 (106)
T 2ee8_A           13 KTKKEFICKFCGRHFTKSYNLLIHERTHT-------------DERPYTCDIC-------HKAFRRQDHLRDHRYIHSKEK   72 (106)
T ss_dssp             CCCCCCBCSSSCCBCSSHHHHHHHHHHHC-------------CSCCCBCSSS-------CCBCSCHHHHHHHGGGSCCCC
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHHcC-------------CCCCcCCCCc-------cchhCCHHHHHHHHHHhCCCC
Confidence            34578999999999999999999999998             8899999999       999999999999999999999


Q ss_pred             ccccCcCCccccChhhHHHHHHH-hCCCceee
Q 014855          158 KWKCEKCSKKYAVQSDWKAHSKI-CGTREYKC  188 (417)
Q Consensus       158 p~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C  188 (417)
                      +|+|.+|++.|.....|..|+++ +++++|.+
T Consensus        73 ~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~~  104 (106)
T 2ee8_A           73 PFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA  104 (106)
T ss_dssp             TTSCSSSCCCCSSHHHHHHHHHHTTSCCCCCC
T ss_pred             CeECCCcCCcccCHHHHHHHHHHhCCCCCCcC
Confidence            99999999999999999999999 78888864

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.77  E-value=6.1e-19  Score=153.26  Aligned_cols=119  Identities=20%  Similarity=0.298  Sum_probs=109.3

Q ss_pred             CCCCcCCCCCCCCCCChhhhhcCccc-cCCCCc--------eecccccccccChHHHHHHHHhcCCCcccccccccccCC
Q 014855           51 PPSKKKRSLPGNPDPDAEVIALSPKS-LMATNR--------FLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERK  121 (417)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~k~--------~~C~~Cgk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~  121 (417)
                      ......+..++..+.....+..|.+. |.++++        |.|.+|++.|.....|..|+++|.             ++
T Consensus        22 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~-------------~~   88 (155)
T 2rpc_A           22 AQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHT-------------GE   88 (155)
T ss_dssp             TCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHH-------------CC
T ss_pred             hhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcC-------------CC
Confidence            45677888999999999999988876 666654        899999999999999999999998             88


Q ss_pred             ceeeCCC--CCccCCCCCCcccCHHHHHHHHhhccCCCccccCc--CCccccChhhHHHHHHH-hCCCceeec
Q 014855          122 KVYVCPE--PTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEK--CSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       122 k~~~C~~--C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~--C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      ++|.|.+  |       ++.|.....|.+|+++|+++++|.|.+  |++.|.....|.+|+++ +++++|.|.
T Consensus        89 ~~~~C~~~~C-------~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A           89 KPFPCPFPGC-------GKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             CSEECSCTTT-------CCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             CcccCCcCCC-------CCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            9999998  8       999999999999999999999999997  99999999999999999 899999984

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.75  E-value=1.8e-18  Score=137.83  Aligned_cols=88  Identities=27%  Similarity=0.496  Sum_probs=67.7

Q ss_pred             CCCCceecccccccccChHHHHHHHHhcCCCcccccccccccCCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCC
Q 014855           78 MATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEK  157 (417)
Q Consensus        78 ~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ek  157 (417)
                      .++++|+|.+|++.|.....|..|+++|.             ++++|.|.+|       ++.|.....|.+|++.|++++
T Consensus         4 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~~   63 (96)
T 2dmd_A            4 GSSGPHKCEVCGKCFSRKDKLKTHMRCHT-------------GVKPYKCKTC-------DYAAADSSSLNKHLRIHSDER   63 (96)
T ss_dssp             CCCCCCCBTTTTBCCCCHHHHHHHGGGCC-------------CCCSEECSSS-------CCEESSHHHHHHHHHHSCCCC
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHhcC-------------CCCCEeCCCC-------CCccCCHHHHHHHHHHhCCCC
Confidence            45667888888888888888888887777             6677888777       778888888888888887777


Q ss_pred             ccccCcCCccccChhhHHHHHHH-hCCCc
Q 014855          158 KWKCEKCSKKYAVQSDWKAHSKI-CGTRE  185 (417)
Q Consensus       158 p~~C~~C~k~F~~~~~L~~H~~~-~~ekp  185 (417)
                      +|+|.+|++.|.....|..|+++ ++++.
T Consensus        64 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   92 (96)
T 2dmd_A           64 PFKCQICPYASRNSSQLTVHLRSHTGDSG   92 (96)
T ss_dssp             CEECSSSSCEESSHHHHHHHHTTCCSCCC
T ss_pred             CccCCCCCCccCCHHHHHHHHHHhcCCCC
Confidence            78888888888777777777777 55543

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.73  E-value=2.9e-18  Score=139.83  Aligned_cols=93  Identities=18%  Similarity=0.229  Sum_probs=84.6

Q ss_pred             ccccCCCCceecccccccccChHHHHHHHHhcCCCcccccccccccCCceeeCCCCCccCCCCCCcccCHHHHHHHHhhc
Q 014855           74 PKSLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRK  153 (417)
Q Consensus        74 ~~~~~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H  153 (417)
                      .+.+.++++|+|.+|++.|.....|..|+++|.               ++|.|.+|       ++.|.....|.+|++ |
T Consensus         8 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~---------------~~~~C~~C-------~~~f~~~~~l~~H~~-H   64 (107)
T 1wjp_A            8 ASPVENKEVYQCRLCNAKLSSLLEQGSHERLCR---------------NAAVCPYC-------SLRFFSPELKQEHES-K   64 (107)
T ss_dssp             CCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHHH---------------HSBCCTTT-------CCCBSSHHHHHHHHH-H
T ss_pred             CcccCCCcCeECCCCCCccCCHHHHHHHHHHCC---------------CCccCCCC-------CCccCCHHHHHHHHH-c
Confidence            456778899999999999999999999999985               57999999       999999999999996 9


Q ss_pred             cCCCccccCcCCccccChhhHHHHHH-H-hCCCceeec
Q 014855          154 HGEKKWKCEKCSKKYAVQSDWKAHSK-I-CGTREYKCD  189 (417)
Q Consensus       154 ~~ekp~~C~~C~k~F~~~~~L~~H~~-~-~~ekp~~C~  189 (417)
                      +++++|+|.+|++.|.....|..|++ + .++++|.|.
T Consensus        65 ~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           65 CEYKKLTCLECMRTFKSSFSIWRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             CSTGGGEEGGGTEECSSHHHHHHHHHHTSCCCCCCCCC
T ss_pred             CCCCCccCccccchhCCHHHHHHHHHHHcCCCCCCCCC
Confidence            99999999999999999999999998 5 678888874

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.73  E-value=3.7e-18  Score=142.48  Aligned_cols=107  Identities=18%  Similarity=0.328  Sum_probs=95.6

Q ss_pred             CCCCCCCChhhhhcCccccCCCCceecccccccccChHHHHHHHHhcCCCcccccccccccCCceeeCCC--CCccCCCC
Q 014855           59 LPGNPDPDAEVIALSPKSLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPE--PTCVHHDP  136 (417)
Q Consensus        59 ~~~~~~~~~~~~~~~~~~~~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~--C~C~~~~~  136 (417)
                      .++..+.....+..+.+.| ++++|.|.+|++.|.....|..|+++|.             ++++|.|.+  |       
T Consensus        12 ~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~~~C-------   70 (124)
T 1ubd_C           12 GCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHT-------------GEKPFQCTFEGC-------   70 (124)
T ss_dssp             TCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTS-------------CCCCEECCSTTC-------
T ss_pred             CCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcC-------------CCCCeeCCCCCC-------
Confidence            6778888888888888888 8899999999999999999999999998             889999986  7       


Q ss_pred             CCcccCHHHHHHHHhhccCCCccccC--cCCccccChhhHHHHHHH-hCCCce
Q 014855          137 SRALGDLTGIKKHFSRKHGEKKWKCE--KCSKKYAVQSDWKAHSKI-CGTREY  186 (417)
Q Consensus       137 ~k~f~~~~~L~~H~~~H~~ekp~~C~--~C~k~F~~~~~L~~H~~~-~~ekp~  186 (417)
                      ++.|.....|..|+++|+++++|.|.  .|++.|.....|..|+++ ++++++
T Consensus        71 ~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~  123 (124)
T 1ubd_C           71 GKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN  123 (124)
T ss_dssp             CCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC-----
T ss_pred             cCccCCHHHHHHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcccccC
Confidence            99999999999999999999999995  599999999999999999 777765

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.73  E-value=9.1e-18  Score=139.73  Aligned_cols=115  Identities=17%  Similarity=0.310  Sum_probs=103.7

Q ss_pred             CCCcCCCCCCCCCCChhhhhcCccccCCCCceecccccccccChHHHHHHHHhcCCCcccccccccccCCceeeCCCCCc
Q 014855           52 PSKKKRSLPGNPDPDAEVIALSPKSLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTC  131 (417)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~C~C  131 (417)
                      .....+..++..+.....+..+.+.+.++++|.|++|++.|.....|..|++.|.          .+.++++|.|.+|  
T Consensus         5 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~----------~~~~~~~~~C~~C--   72 (124)
T 2dlq_A            5 SSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNC----------MNRSEQVFTCSVC--   72 (124)
T ss_dssp             CSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCC----------CCSCCCCEECSSS--
T ss_pred             CCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhh----------cCCCCCCeECCCC--
Confidence            3456788899999999999999999999999999999999999999999998753          1127889999999  


Q ss_pred             cCCCCCCcccCHHHHHHHHhhccCCCccccCcCCccccChhhHHHHHHH-hCC
Q 014855          132 VHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGT  183 (417)
Q Consensus       132 ~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~e  183 (417)
                           ++.|.....|..|+++|+++++|.|.+|++.|.....|..|++. |+.
T Consensus        73 -----~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  120 (124)
T 2dlq_A           73 -----QETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG  120 (124)
T ss_dssp             -----CCEESSHHHHHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSC
T ss_pred             -----CCccCCHHHHHHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCCC
Confidence                 99999999999999999999999999999999999999999987 543

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.72  E-value=5.3e-18  Score=133.23  Aligned_cols=85  Identities=26%  Similarity=0.556  Sum_probs=56.4

Q ss_pred             CCceecc--cccccccChHHHHHHHHhcCCCcccccccccccCCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCC
Q 014855           80 TNRFLCE--ICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEK  157 (417)
Q Consensus        80 ~k~~~C~--~Cgk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ek  157 (417)
                      +++|.|.  .|++.|.....|..|+++|.             ++++|.|..|       ++.|.....|..|+++|++++
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~~   61 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHT-------------GQKPFQCRIC-------MRNFSRSDHLTTHIRTHTGEK   61 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHH-------------CCCCEECTTT-------CCEESCHHHHHHHHHHHHCCC
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhC-------------CCCCccCCCC-------CcccCCHHHHHHHHHHcCCCC
Confidence            4567776  47777777777777776666             5666777766       667777777777777777777


Q ss_pred             ccccCcCCccccChhhHHHHHHH-hCCC
Q 014855          158 KWKCEKCSKKYAVQSDWKAHSKI-CGTR  184 (417)
Q Consensus       158 p~~C~~C~k~F~~~~~L~~H~~~-~~ek  184 (417)
                      +|.|.+|++.|.....|..|+++ ++++
T Consensus        62 ~~~C~~C~~~f~~~~~l~~H~~~H~~~k   89 (90)
T 1a1h_A           62 PFACDICGRKFARSDERKRHTKIHLRQK   89 (90)
T ss_dssp             CEECTTTCCEESSHHHHHHHHGGGGC--
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhcccC
Confidence            77777777777777777777666 4443

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.72  E-value=1.5e-17  Score=132.05  Aligned_cols=83  Identities=25%  Similarity=0.502  Sum_probs=65.3

Q ss_pred             CCCCceecccccccccChHHHHHHHHhcCCCcccccccccccCCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCC-
Q 014855           78 MATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGE-  156 (417)
Q Consensus        78 ~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~e-  156 (417)
                      .++++|.|.+|++.|.....|..|+++|.             ++++|.|.+|       ++.|.....|.+|++.|+++ 
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~~   62 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHS-------------GEKPYSCPVC-------GLRFKRKDRMSYHVRSHDGSV   62 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSC-------------SSCSEECSSS-------CCEESCHHHHHHHHHHHCCCC
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcC-------------CCCCCcCCCC-------CCccCCHHHHHHHHHHhcCCC
Confidence            35667888888888888888888888877             6777888887       78888888888888888776 


Q ss_pred             -CccccCcCCccccChhhHHHHHHH
Q 014855          157 -KKWKCEKCSKKYAVQSDWKAHSKI  180 (417)
Q Consensus       157 -kp~~C~~C~k~F~~~~~L~~H~~~  180 (417)
                       ++|+|.+|++.|.....|..|++.
T Consensus        63 ~~~~~C~~C~~~f~~~~~L~~H~~~   87 (95)
T 2yt9_A           63 GKPYICQSCGKGFSRPDHLNGHIKQ   87 (95)
T ss_dssp             CSSBCCSSSCCCBSSHHHHHHHHHH
T ss_pred             CCceECCCccchhCCHHHHHHHHHH
Confidence             778888888888888888888764

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.71  E-value=8.5e-18  Score=129.57  Aligned_cols=79  Identities=32%  Similarity=0.579  Sum_probs=54.6

Q ss_pred             ceecccccccccChHHHHHHHHhcCCCcccccccccccCCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCcccc
Q 014855           82 RFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKC  161 (417)
Q Consensus        82 ~~~C~~Cgk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C  161 (417)
                      +|.|.+|++.|.....|..|+++|.             ++++|.|.+|       ++.|.....|.+|++.|+++++|.|
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~~~~~C   60 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHS-------------DTRPYPCQYC-------GKRFHQKSDMKKHTFIHTGEKPHKC   60 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHH-------------TCCCEECSSS-------CCEESSHHHHHHHHHHHHTCCCEEC
T ss_pred             CccCCCCcccccCchhHHHHHHHcC-------------CCCCeeCCcC-------ChhhCCHHHHHHHHHHhcCCCCCcC
Confidence            3667777777777777777776666             5666777766       6677777777777777766667777


Q ss_pred             CcCCccccChhhHHHHHHH
Q 014855          162 EKCSKKYAVQSDWKAHSKI  180 (417)
Q Consensus       162 ~~C~k~F~~~~~L~~H~~~  180 (417)
                      .+|++.|.....|..|+++
T Consensus        61 ~~C~~~f~~~~~l~~H~~~   79 (82)
T 2kmk_A           61 QVCGKAFSQSSNLITHSRK   79 (82)
T ss_dssp             TTTSCEESSHHHHHHHHHH
T ss_pred             CCcchhhCChHHHHHHHHh
Confidence            7777777766666666665

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.71  E-value=8.4e-18  Score=139.04  Aligned_cols=107  Identities=21%  Similarity=0.420  Sum_probs=99.7

Q ss_pred             CcCCCC--CCCCCCChhhhhcCccccCCCCceecc--cccccccChHHHHHHHHhcCCCcccccccccccCCceeeCCCC
Q 014855           54 KKKRSL--PGNPDPDAEVIALSPKSLMATNRFLCE--ICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEP  129 (417)
Q Consensus        54 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~k~~~C~--~Cgk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~C  129 (417)
                      ...+..  ++..+.....+..+.+.+.++++|.|.  .|++.|.....|..|+++|.             ++++|.|.+|
T Consensus         6 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~C   72 (119)
T 2jp9_A            6 PFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHT-------------GVKPFQCKTC   72 (119)
T ss_dssp             CBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHH-------------CCCCEECTTT
T ss_pred             eeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcC-------------CCCCccCCcc
Confidence            345554  888888899999999999999999999  79999999999999999998             8899999999


Q ss_pred             CccCCCCCCcccCHHHHHHHHhhccCCCcccc--CcCCccccChhhHHHHHHH
Q 014855          130 TCVHHDPSRALGDLTGIKKHFSRKHGEKKWKC--EKCSKKYAVQSDWKAHSKI  180 (417)
Q Consensus       130 ~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C--~~C~k~F~~~~~L~~H~~~  180 (417)
                             ++.|.....|.+|+++|+++++|+|  ++|++.|.....|..|+++
T Consensus        73 -------~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~  118 (119)
T 2jp9_A           73 -------QRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNM  118 (119)
T ss_dssp             -------CCEESCHHHHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHT
T ss_pred             -------CchhCCHHHHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhc
Confidence                   9999999999999999999999999  8999999999999999986

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.71  E-value=4.6e-18  Score=140.23  Aligned_cols=98  Identities=14%  Similarity=0.227  Sum_probs=76.5

Q ss_pred             hhhcCccccCCCCceecccccccccChHHHHHHHHh--cCCCcccccccccccCCcee-eCCCCCccCCCCCCcc--cCH
Q 014855           69 VIALSPKSLMATNRFLCEICNKGFQRDQNLQLHRRG--HNLPWKLKQRTNKVERKKVY-VCPEPTCVHHDPSRAL--GDL  143 (417)
Q Consensus        69 ~~~~~~~~~~~~k~~~C~~Cgk~F~~~~~L~~H~~~--H~~p~~~~~~~~~~~~~k~~-~C~~C~C~~~~~~k~f--~~~  143 (417)
                      .+..+.+.|.++++|.|++|++.|.....|..|+++  |.             +.+++ .|.+|       ++.|  ...
T Consensus         6 ~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~-------------~~~~~~~C~~C-------~~~f~f~~~   65 (115)
T 2dmi_A            6 SGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHY-------------RDDNHETDNNN-------PKRWSKPRK   65 (115)
T ss_dssp             CCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCC-------------BCSCCCCCCCC-------CSCCSSCCC
T ss_pred             hhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCcc-------------ccCCCccCCCC-------CcccccccH
Confidence            345667778888888888888888888888888887  54             44544 48888       6666  788


Q ss_pred             HHHHHHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCce
Q 014855          144 TGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREY  186 (417)
Q Consensus       144 ~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~  186 (417)
                      ..|.+|+++|+++++|.|.+|++.|.....|.+|+++ +.....
T Consensus        66 ~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~hh~~~~~  109 (115)
T 2dmi_A           66 RSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKV  109 (115)
T ss_dssp             CCCCCCCCSCCCCSSCBCSSSCCBCSSHHHHHHHHHHTTTTTCS
T ss_pred             HHHHHHhhccCCCcceECCCCCCccCCHHHHHHHHHHhCCcccC
Confidence            8888888888888888888888888888888888887 544433

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.71  E-value=1.6e-17  Score=135.86  Aligned_cols=83  Identities=18%  Similarity=0.379  Sum_probs=42.5

Q ss_pred             cCCCCceecccccccccChHHHHHHHHhcCCCcccccccccccCCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCC
Q 014855           77 LMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGE  156 (417)
Q Consensus        77 ~~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~e  156 (417)
                      |.++++|.| .|++.|.....|.+|++.|.             ++++|.|.+|       ++.|.....|.+|+++|+++
T Consensus         5 h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~   63 (110)
T 2csh_A            5 SSGDKLYPC-QCGKSFTHKSQRDRHMSMHL-------------GLRPYGCGVC-------GKKFKMKHHLVGHMKIHTGI   63 (110)
T ss_dssp             CCCCCCEEC-TTSCEESSHHHHHHHHHHHS-------------CCCSEECTTT-------SCEESSSHHHHHHHTTTCCC
T ss_pred             CCCCCCEec-cCCCccCCHHHHHHHHHHcC-------------CCcCccCCCC-------CcccCCHHHHHHHHHHcCCC
Confidence            344455555 45555555555555555554             4445555555       55555555555555555555


Q ss_pred             CccccCcCCccccChhhHHHHHHH
Q 014855          157 KKWKCEKCSKKYAVQSDWKAHSKI  180 (417)
Q Consensus       157 kp~~C~~C~k~F~~~~~L~~H~~~  180 (417)
                      ++|+|.+|++.|.....|.+|+++
T Consensus        64 ~~~~C~~C~~~f~~~~~l~~H~~~   87 (110)
T 2csh_A           64 KPYECNICAKRFMWRDSFHRHVTS   87 (110)
T ss_dssp             CCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCeeCCCCcchhcCHHHHHHHHHH
Confidence            555555555555555555555444

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.71  E-value=1.9e-17  Score=131.82  Aligned_cols=85  Identities=20%  Similarity=0.332  Sum_probs=81.1

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec-CCCccCCc
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD-CGKLFSRR  197 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~-C~k~F~~~  197 (417)
                      ++++|.|.+|       ++.|.....|..|++.|+++++|.|.+|++.|.....|..|+++ +++++|.|. |++.|..+
T Consensus         5 ~~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~   77 (96)
T 2dmd_A            5 SSGPHKCEVC-------GKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNS   77 (96)
T ss_dssp             CCCCCCBTTT-------TBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSH
T ss_pred             CCcCeECCCC-------CCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCH
Confidence            7889999999       99999999999999999999999999999999999999999999 889999999 99999999


Q ss_pred             hHHHHHHhhccccc
Q 014855          198 DSFITHRAFCDVLA  211 (417)
Q Consensus       198 ~~L~~H~~~h~~~~  211 (417)
                      ..|.+|+++|+...
T Consensus        78 ~~l~~H~~~h~~~~   91 (96)
T 2dmd_A           78 SQLTVHLRSHTGDS   91 (96)
T ss_dssp             HHHHHHHTTCCSCC
T ss_pred             HHHHHHHHHhcCCC
Confidence            99999999987543

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.70  E-value=2.1e-17  Score=129.85  Aligned_cols=83  Identities=23%  Similarity=0.602  Sum_probs=77.8

Q ss_pred             CCceeeCC--CCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec-CCCccC
Q 014855          120 RKKVYVCP--EPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD-CGKLFS  195 (417)
Q Consensus       120 ~~k~~~C~--~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~-C~k~F~  195 (417)
                      ++++|.|.  .|       ++.|.....|..|+++|+++++|.|.+|++.|.....|..|+++ +++++|.|. |++.|.
T Consensus         1 ~~k~~~C~~~~C-------~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~   73 (90)
T 1a1h_A            1 MERPYACPVESC-------DRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFA   73 (90)
T ss_dssp             --CCEECCSSSC-------CCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEES
T ss_pred             CCCceECCCCCC-------CCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhC
Confidence            36889998  47       99999999999999999999999999999999999999999999 899999999 999999


Q ss_pred             CchHHHHHHhhccc
Q 014855          196 RRDSFITHRAFCDV  209 (417)
Q Consensus       196 ~~~~L~~H~~~h~~  209 (417)
                      .+..|.+|+++|..
T Consensus        74 ~~~~l~~H~~~H~~   87 (90)
T 1a1h_A           74 RSDERKRHTKIHLR   87 (90)
T ss_dssp             SHHHHHHHHGGGGC
T ss_pred             CHHHHHHHHHHhcc
Confidence            99999999999864

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.70  E-value=1.5e-17  Score=135.93  Aligned_cols=85  Identities=29%  Similarity=0.622  Sum_probs=80.8

Q ss_pred             ccCCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec-CCCccC
Q 014855          118 VERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD-CGKLFS  195 (417)
Q Consensus       118 ~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~-C~k~F~  195 (417)
                      +.++++|.| .|       ++.|.....|.+|++.|+++++|.|.+|++.|.....|..|+++ +++++|.|. |++.|.
T Consensus         5 h~~~k~~~C-~C-------~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~   76 (110)
T 2csh_A            5 SSGDKLYPC-QC-------GKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFM   76 (110)
T ss_dssp             CCCCCCEEC-TT-------SCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEES
T ss_pred             CCCCCCEec-cC-------CCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhc
Confidence            448999999 88       99999999999999999999999999999999999999999999 799999999 999999


Q ss_pred             CchHHHHHHhhcccc
Q 014855          196 RRDSFITHRAFCDVL  210 (417)
Q Consensus       196 ~~~~L~~H~~~h~~~  210 (417)
                      .+..|.+|++.|+..
T Consensus        77 ~~~~l~~H~~~~~~~   91 (110)
T 2csh_A           77 WRDSFHRHVTSCTKS   91 (110)
T ss_dssp             CHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHcccc
Confidence            999999999998744

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.70  E-value=2.3e-17  Score=127.06  Aligned_cols=79  Identities=27%  Similarity=0.569  Sum_probs=76.5

Q ss_pred             eeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec-CCCccCCchHH
Q 014855          123 VYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD-CGKLFSRRDSF  200 (417)
Q Consensus       123 ~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~-C~k~F~~~~~L  200 (417)
                      +|.|.+|       ++.|.....|..|++.|.++++|.|.+|++.|.....|..|+++ +++++|.|. |++.|..+..|
T Consensus         1 ~~~C~~C-------~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   73 (82)
T 2kmk_A            1 SFDCKIC-------GKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNL   73 (82)
T ss_dssp             CEECSSS-------CCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHH
T ss_pred             CccCCCC-------cccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHH
Confidence            5899999       99999999999999999999999999999999999999999999 899999999 99999999999


Q ss_pred             HHHHhhcc
Q 014855          201 ITHRAFCD  208 (417)
Q Consensus       201 ~~H~~~h~  208 (417)
                      .+|+++|.
T Consensus        74 ~~H~~~H~   81 (82)
T 2kmk_A           74 ITHSRKHT   81 (82)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHHhhC
Confidence            99999885

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.69  E-value=1.4e-18  Score=143.33  Aligned_cols=97  Identities=13%  Similarity=0.193  Sum_probs=87.4

Q ss_pred             hHHHHHHHHhcCCCcccccccccccCCceeeCCCCCccCCCCCCcccCHHHHHHHHhh--ccCCCccc-cCcCCccc--c
Q 014855           95 DQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSR--KHGEKKWK-CEKCSKKY--A  169 (417)
Q Consensus        95 ~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~--H~~ekp~~-C~~C~k~F--~  169 (417)
                      ...|..|+++|.             ++++|.|.+|       ++.|.....|..|++.  |.+++++. |.+|++.|  .
T Consensus         4 ~~~l~~H~~~H~-------------~~~~~~C~~C-------~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~   63 (115)
T 2dmi_A            4 GSSGKLYGSIFT-------------GASKFRCKDC-------SAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKP   63 (115)
T ss_dssp             CCCCCCCCCCCC-------------CCCSEEBSSS-------SCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSC
T ss_pred             chhhhhheeeeC-------------CCCCEECCcc-------CchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccc
Confidence            345777888887             8999999999       9999999999999999  88777765 99999999  9


Q ss_pred             ChhhHHHHHHH-hCCCceeec-CCCccCCchHHHHHHhhccccc
Q 014855          170 VQSDWKAHSKI-CGTREYKCD-CGKLFSRRDSFITHRAFCDVLA  211 (417)
Q Consensus       170 ~~~~L~~H~~~-~~ekp~~C~-C~k~F~~~~~L~~H~~~h~~~~  211 (417)
                      ....|..|+++ +++++|.|. |++.|..+..|.+|++.|+...
T Consensus        64 ~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~hh~~~  107 (115)
T 2dmi_A           64 RKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQ  107 (115)
T ss_dssp             CCCCCCCCCCSCCCCSSCBCSSSCCBCSSHHHHHHHHHHTTTTT
T ss_pred             cHHHHHHHhhccCCCcceECCCCCCccCCHHHHHHHHHHhCCcc
Confidence            99999999999 889999999 9999999999999999987443

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.69  E-value=4.4e-17  Score=132.17  Aligned_cols=84  Identities=23%  Similarity=0.495  Sum_probs=80.4

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec-CCCccCCc
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD-CGKLFSRR  197 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~-C~k~F~~~  197 (417)
                      .+++|.|.+|       ++.|.....|.+|++.|+++++|.|.+|++.|.....|..|+++ +++++|.|. |++.|..+
T Consensus        14 ~~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~   86 (106)
T 2ee8_A           14 TKKEFICKFC-------GRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQS   86 (106)
T ss_dssp             CCCCCBCSSS-------CCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSH
T ss_pred             CCcCeECCCC-------CCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCH
Confidence            6789999999       99999999999999999999999999999999999999999999 889999999 99999999


Q ss_pred             hHHHHHHhhcccc
Q 014855          198 DSFITHRAFCDVL  210 (417)
Q Consensus       198 ~~L~~H~~~h~~~  210 (417)
                      ..|.+|+++|...
T Consensus        87 ~~L~~H~~~H~~~   99 (106)
T 2ee8_A           87 RTLAVHKTLHMQT   99 (106)
T ss_dssp             HHHHHHHHHTTSC
T ss_pred             HHHHHHHHHhCCC
Confidence            9999999999744

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.67  E-value=8.4e-17  Score=127.74  Aligned_cols=82  Identities=24%  Similarity=0.488  Sum_probs=77.6

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcCCccccChhhHHHHHHH-hCC--Cceeec-CCCccC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGT--REYKCD-CGKLFS  195 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~e--kp~~C~-C~k~F~  195 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|.|.+|++.|.....|..|+++ +++  ++|.|. |++.|.
T Consensus         4 ~~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~   76 (95)
T 2yt9_A            4 GSSGVACEIC-------GKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFS   76 (95)
T ss_dssp             CCSCEECSSS-------CCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBS
T ss_pred             CCCCeECCCC-------CCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhC
Confidence            7899999999       99999999999999999999999999999999999999999999 666  999999 999999


Q ss_pred             CchHHHHHHh-hcc
Q 014855          196 RRDSFITHRA-FCD  208 (417)
Q Consensus       196 ~~~~L~~H~~-~h~  208 (417)
                      ++..|.+|++ .|.
T Consensus        77 ~~~~L~~H~~~~H~   90 (95)
T 2yt9_A           77 RPDHLNGHIKQVHS   90 (95)
T ss_dssp             SHHHHHHHHHHTSC
T ss_pred             CHHHHHHHHHHhcC
Confidence            9999999997 553

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.65  E-value=4.2e-16  Score=124.78  Aligned_cols=84  Identities=20%  Similarity=0.503  Sum_probs=71.8

Q ss_pred             CCCCceeccc--ccccccChHHHHHHHHhcCCCcccccccccccCCceeeCC--CCCccCCCCCCcccCHHHHHHHHhhc
Q 014855           78 MATNRFLCEI--CNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCP--EPTCVHHDPSRALGDLTGIKKHFSRK  153 (417)
Q Consensus        78 ~~~k~~~C~~--Cgk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~--~C~C~~~~~~k~f~~~~~L~~H~~~H  153 (417)
                      ...+.|.|.+  |++.|.....|..|+++|.             ++++|.|.  .|       ++.|.....|.+|+++|
T Consensus        11 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~~~C-------~~~f~~~~~l~~H~~~h   70 (100)
T 2ebt_A           11 EKRRIHYCDYPGCTKVYTKSSHLKAHLRTHT-------------GEKPYKCTWEGC-------DWRFARSDELTRHYRKH   70 (100)
T ss_dssp             CSCCCEECCSSSCCCEESCHHHHHHHHHHHS-------------CCCCEECCSSSC-------CCEESSHHHHHHHHHHH
T ss_pred             ccCcceEcCCCCCCCcccCHHHHHHHHHHhC-------------CCCCeeCCCCCC-------CCccCCHHHHHHHHHHh
Confidence            3456788986  9999999999999998888             77889996  46       88999999999999999


Q ss_pred             cCCCccccCcCCccccChhhHHHHHHHh
Q 014855          154 HGEKKWKCEKCSKKYAVQSDWKAHSKIC  181 (417)
Q Consensus       154 ~~ekp~~C~~C~k~F~~~~~L~~H~~~~  181 (417)
                      +++++|+|.+|++.|.....|..|+++|
T Consensus        71 ~~~~~~~C~~C~~~f~~~~~l~~H~~~H   98 (100)
T 2ebt_A           71 TGAKPFQCGVCNRSFSRSDHLALHMKRH   98 (100)
T ss_dssp             TSCCSCBCSSSCCBCSSHHHHHHHHHHH
T ss_pred             CCCCCeECCCCcCccCCHHHHHHHHHHh
Confidence            9999999999999999999998888874

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.64  E-value=2.6e-16  Score=123.17  Aligned_cols=80  Identities=21%  Similarity=0.577  Sum_probs=44.3

Q ss_pred             Cceeccc--ccccccChHHHHHHHHhcCCCcccccccccccCCceeeCC--CCCccCCCCCCcccCHHHHHHHHhhccCC
Q 014855           81 NRFLCEI--CNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCP--EPTCVHHDPSRALGDLTGIKKHFSRKHGE  156 (417)
Q Consensus        81 k~~~C~~--Cgk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~--~C~C~~~~~~k~f~~~~~L~~H~~~H~~e  156 (417)
                      +.|.|.+  |++.|.....|..|+++|.             ++++|.|+  .|       ++.|.....|.+|++.|+++
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~~~C-------~~~f~~~~~l~~H~~~h~~~   63 (89)
T 2wbs_A            4 ATHTCDYAGCGKTYTKSSHLKAHLRTHT-------------GEKPYHCDWDGC-------GWKFARSDELTRHYRKHTGH   63 (89)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHTTSC-------------SSCCEECCSTTT-------CCEESSHHHHHHHHHHHHCC
T ss_pred             CCeeCCCCCCCCcCCCHHHHHHHHHhcC-------------CCCCcCCCCCCC-------CCccCCHHHHHHHHHHcCCC
Confidence            3455555  5555555555555555555             45555554  24       55555555555555555555


Q ss_pred             CccccCcCCccccChhhHHHHHHH
Q 014855          157 KKWKCEKCSKKYAVQSDWKAHSKI  180 (417)
Q Consensus       157 kp~~C~~C~k~F~~~~~L~~H~~~  180 (417)
                      ++|.|.+|++.|.....|..|+++
T Consensus        64 ~~~~C~~C~~~f~~~~~l~~H~~~   87 (89)
T 2wbs_A           64 RPFQCQKCDRAFSRSDHLALHMKR   87 (89)
T ss_dssp             CCEECSSSSCEESSHHHHHHHGGG
T ss_pred             CCccCCCCCcccCCHHHHHHHHHh
Confidence            555555555555555555555543

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.63  E-value=5.7e-16  Score=121.24  Aligned_cols=81  Identities=26%  Similarity=0.560  Sum_probs=76.5

Q ss_pred             CCceeeCCC--CCccCCCCCCcccCHHHHHHHHhhccCCCccccC--cCCccccChhhHHHHHHH-hCCCceeec-CCCc
Q 014855          120 RKKVYVCPE--PTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCE--KCSKKYAVQSDWKAHSKI-CGTREYKCD-CGKL  193 (417)
Q Consensus       120 ~~k~~~C~~--C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~--~C~k~F~~~~~L~~H~~~-~~ekp~~C~-C~k~  193 (417)
                      +.+.|.|.+  |       ++.|.....|..|++.|+++++|.|.  .|++.|.....|..|+++ +++++|.|. |++.
T Consensus         2 ~~~~~~C~~~~C-------~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~   74 (89)
T 2wbs_A            2 RTATHTCDYAGC-------GKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRA   74 (89)
T ss_dssp             -CCCEECCSTTT-------CCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCE
T ss_pred             CCCCeeCCCCCC-------CCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcc
Confidence            356799999  7       99999999999999999999999997  699999999999999999 899999999 9999


Q ss_pred             cCCchHHHHHHhhc
Q 014855          194 FSRRDSFITHRAFC  207 (417)
Q Consensus       194 F~~~~~L~~H~~~h  207 (417)
                      |..+..|.+|+++|
T Consensus        75 f~~~~~l~~H~~~H   88 (89)
T 2wbs_A           75 FSRSDHLALHMKRH   88 (89)
T ss_dssp             ESSHHHHHHHGGGG
T ss_pred             cCCHHHHHHHHHhh
Confidence            99999999999987

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.62  E-value=3.5e-16  Score=127.37  Aligned_cols=82  Identities=23%  Similarity=0.356  Sum_probs=75.6

Q ss_pred             ccCCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcCCccccChhhHHHHHHHhCCCceeec-CCCccCC
Q 014855          118 VERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKICGTREYKCD-CGKLFSR  196 (417)
Q Consensus       118 ~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~~~ekp~~C~-C~k~F~~  196 (417)
                      +.++++|.|.+|       ++.|.....|..|+++|  +++|.|.+|++.|.....|..|++.+++++|.|. |++.|..
T Consensus        11 h~~~~~~~C~~C-------~~~f~~~~~l~~H~~~H--~~~~~C~~C~~~f~~~~~l~~H~~H~~~~~~~C~~C~~~f~~   81 (107)
T 1wjp_A           11 VENKEVYQCRLC-------NAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHESKCEYKKLTCLECMRTFKS   81 (107)
T ss_dssp             CCCCCCCBCTTT-------CCBCSSHHHHHHHHHHH--HHSBCCTTTCCCBSSHHHHHHHHHHCSTGGGEEGGGTEECSS
T ss_pred             cCCCcCeECCCC-------CCccCCHHHHHHHHHHC--CCCccCCCCCCccCCHHHHHHHHHcCCCCCccCccccchhCC
Confidence            348899999999       99999999999999999  4799999999999999999999954789999999 9999999


Q ss_pred             chHHHHHHh-hcc
Q 014855          197 RDSFITHRA-FCD  208 (417)
Q Consensus       197 ~~~L~~H~~-~h~  208 (417)
                      +..|.+|++ .|.
T Consensus        82 ~~~L~~H~~~~H~   94 (107)
T 1wjp_A           82 SFSIWRHQVEVHN   94 (107)
T ss_dssp             HHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHcC
Confidence            999999998 553

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.62  E-value=8.4e-16  Score=122.98  Aligned_cols=82  Identities=23%  Similarity=0.570  Sum_probs=77.9

Q ss_pred             CCceeeCCC--CCccCCCCCCcccCHHHHHHHHhhccCCCccccC--cCCccccChhhHHHHHHH-hCCCceeec-CCCc
Q 014855          120 RKKVYVCPE--PTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCE--KCSKKYAVQSDWKAHSKI-CGTREYKCD-CGKL  193 (417)
Q Consensus       120 ~~k~~~C~~--C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~--~C~k~F~~~~~L~~H~~~-~~ekp~~C~-C~k~  193 (417)
                      .+++|.|.+  |       ++.|.....|.+|++.|+++++|.|.  .|++.|.....|..|+++ +++++|.|. |++.
T Consensus        12 ~~~~~~C~~~~C-------~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~   84 (100)
T 2ebt_A           12 KRRIHYCDYPGC-------TKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRS   84 (100)
T ss_dssp             SCCCEECCSSSC-------CCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCB
T ss_pred             cCcceEcCCCCC-------CCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCc
Confidence            578899997  7       99999999999999999999999996  699999999999999999 899999999 9999


Q ss_pred             cCCchHHHHHHhhcc
Q 014855          194 FSRRDSFITHRAFCD  208 (417)
Q Consensus       194 F~~~~~L~~H~~~h~  208 (417)
                      |..+..|.+|+++|.
T Consensus        85 f~~~~~l~~H~~~H~   99 (100)
T 2ebt_A           85 FSRSDHLALHMKRHQ   99 (100)
T ss_dssp             CSSHHHHHHHHHHHC
T ss_pred             cCCHHHHHHHHHHhC
Confidence            999999999999884

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.62  E-value=4.4e-17  Score=128.01  Aligned_cols=83  Identities=23%  Similarity=0.343  Sum_probs=78.0

Q ss_pred             CceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcCCccccChhhHHHHHHHhCCCceeec-CCCccCCchH
Q 014855          121 KKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKICGTREYKCD-CGKLFSRRDS  199 (417)
Q Consensus       121 ~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~~~ekp~~C~-C~k~F~~~~~  199 (417)
                      +++|.|.+|       ++.|.....|..|+++|+++++|.|.+|++.|.....|..|++++.+++|.|. |++.|..+..
T Consensus         1 ek~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~c~~C~~~f~~~~~   73 (88)
T 1llm_C            1 MKPFQCRIC-------MRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDKVEELLSKNYH   73 (88)
T ss_dssp             CCCEECTTT-------CCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCC-------CCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCCCcchHHHHHHHHHHHhh
Confidence            478999999       99999999999999999999999999999999999999999999556999999 9999999999


Q ss_pred             HHHHHhhcccc
Q 014855          200 FITHRAFCDVL  210 (417)
Q Consensus       200 L~~H~~~h~~~  210 (417)
                      |..|++.++..
T Consensus        74 L~~H~~~~h~~   84 (88)
T 1llm_C           74 LENEVARLKKL   84 (88)
T ss_dssp             HHHHHHHHHHH
T ss_pred             hHHHHHHHHHH
Confidence            99999887643

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.61  E-value=5.8e-16  Score=113.07  Aligned_cols=58  Identities=24%  Similarity=0.585  Sum_probs=43.1

Q ss_pred             CCceecccccccccChHHHHHHHHhcCCCcccccccccccCCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCC
Q 014855           80 TNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEK  157 (417)
Q Consensus        80 ~k~~~C~~Cgk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ek  157 (417)
                      ||||+|++||+.|.....|.+|+++|.             ++++|.|.+|       ++.|.....|.+|+++|+|++
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht-------------~ekp~~C~~C-------~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHL-------------GYRPRSCPEC-------GKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHH-------------TCCCEECTTT-------CCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhC-------------CCcCeECCCC-------CCCcCCHHHHHHHhCccCCCC
Confidence            567777777777777777777777777             6777777777       777777777777777777764

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.60  E-value=1e-16  Score=125.83  Aligned_cols=80  Identities=21%  Similarity=0.327  Sum_probs=76.7

Q ss_pred             CCceecccccccccChHHHHHHHHhcCCCcccccccccccCCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCcc
Q 014855           80 TNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKW  159 (417)
Q Consensus        80 ~k~~~C~~Cgk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~  159 (417)
                      +++|.|.+|++.|.....|..|+++|.             ++++|.|.+|       ++.|.....|..|++.|++ ++|
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~-------------~~~~~~C~~C-------~k~f~~~~~L~~H~~~h~~-~~~   59 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHT-------------GEKPFACDIC-------GRKFARSDERKRHRDIQHI-LPI   59 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHH-------------CCCCEECTTT-------CCEESSHHHHHHHHHHHTH-HHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcC-------------CCCCccCCCC-------CCccCCHHHHHHHHHHhCC-Ccc
Confidence            478999999999999999999999998             8899999999       9999999999999999985 899


Q ss_pred             ccCcCCccccChhhHHHHHHH
Q 014855          160 KCEKCSKKYAVQSDWKAHSKI  180 (417)
Q Consensus       160 ~C~~C~k~F~~~~~L~~H~~~  180 (417)
                      .|..|++.|.....|..|++.
T Consensus        60 ~c~~C~~~f~~~~~L~~H~~~   80 (88)
T 1llm_C           60 LEDKVEELLSKNYHLENEVAR   80 (88)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHhhhHHHHHH
Confidence            999999999999999999987

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=1.9e-15  Score=115.64  Aligned_cols=72  Identities=21%  Similarity=0.489  Sum_probs=56.5

Q ss_pred             CCCCceeccc--ccccccChHHHHHHHH-hcCCCcccccccccccCCceeeCCC--CCccCCCCCCcccCHHHHHHHHhh
Q 014855           78 MATNRFLCEI--CNKGFQRDQNLQLHRR-GHNLPWKLKQRTNKVERKKVYVCPE--PTCVHHDPSRALGDLTGIKKHFSR  152 (417)
Q Consensus        78 ~~~k~~~C~~--Cgk~F~~~~~L~~H~~-~H~~p~~~~~~~~~~~~~k~~~C~~--C~C~~~~~~k~f~~~~~L~~H~~~  152 (417)
                      .++++|.|..  |++.|..+..|..|++ .|.             ++++|.|.+  |       ++.|.....|.+|+++
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~-------------~~~~~~C~~~~C-------~k~f~~~~~L~~H~~~   62 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHI-------------HQKSFSCPEPAC-------GKSFNFKKHLKEHMKL   62 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGG-------------SCCCEECSCTTT-------CCEESSHHHHHHHHHH
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhC-------------CCCCeECCCCCC-------cCccCCHHHHHHHHHH
Confidence            3456788876  8888888888888887 576             677888887  7       8888888888888888


Q ss_pred             ccCCCccccCcCCcccc
Q 014855          153 KHGEKKWKCEKCSKKYA  169 (417)
Q Consensus       153 H~~ekp~~C~~C~k~F~  169 (417)
                      |+++++|+|.+|++.|.
T Consensus        63 H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A           63 HSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             HHTSCCCSCCSSSCCCC
T ss_pred             hCCCCCeeCCCCCCCCC
Confidence            88888888888888773

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.57  E-value=1.3e-15  Score=111.16  Aligned_cols=53  Identities=23%  Similarity=0.488  Sum_probs=36.8

Q ss_pred             CceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcCCccccChhhHHHHHHH
Q 014855          121 KKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI  180 (417)
Q Consensus       121 ~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~  180 (417)
                      ||||.|.+|       ++.|.....|.+|+++|+|+|||.|.+||+.|.....|.+|+++
T Consensus         2 EKpy~C~~C-------~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~   54 (60)
T 4gzn_C            2 ERPFFCNFC-------GKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKV   54 (60)
T ss_dssp             CCCEECTTT-------CCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGG
T ss_pred             CCCccCCCC-------CCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCc
Confidence            566777766       66777777777777777777777777777777777777777666

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.56  E-value=2.2e-16  Score=132.89  Aligned_cols=121  Identities=15%  Similarity=0.228  Sum_probs=87.6

Q ss_pred             ccCCCCceecccccccccChHHHHHHHHhcCCCcccccccccccCCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccC
Q 014855           76 SLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHG  155 (417)
Q Consensus        76 ~~~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~  155 (417)
                      .+.+.|+|.|..++....  ..+..|.+.+..          ....+.+.|++|+.. -.+.+.|.....|..|+ .|++
T Consensus         6 ~~~~~k~~~~~~k~~~~~--~s~ee~~~~~~l----------~~~~~~~~c~~~~~~-~~~~~~~~~~~~l~~h~-~h~~   71 (129)
T 2wbt_A            6 VDSGSKKYLSNHKGIFIH--VTLEELKRYHQL----------TPEQKRLIRAIVKTL-IHNPQLLDESSYLYRLL-ASKA   71 (129)
T ss_dssp             CCTTCCGGGGCSSCEEEE--CCHHHHHHHTTS----------CHHHHHHHHHHHHHH-HHCGGGTTTHHHHHHHH-HHHH
T ss_pred             hcccccccccccCCeeee--ecHHhhhccccC----------ChhhCcccchhhhcc-cCCCcccCCHHHHHHHH-HhCC
Confidence            456778898876543322  233444444321          013566778777110 00124445677777777 6999


Q ss_pred             CCccccCcCCccccChhhHHHHHHHhCCCceeec-CCCccCCchHHHHHHhhccccc
Q 014855          156 EKKWKCEKCSKKYAVQSDWKAHSKICGTREYKCD-CGKLFSRRDSFITHRAFCDVLA  211 (417)
Q Consensus       156 ekp~~C~~C~k~F~~~~~L~~H~~~~~ekp~~C~-C~k~F~~~~~L~~H~~~h~~~~  211 (417)
                      +++|.|.+||+.|.....|..|+++| +++|.|. |++.|.++..|.+|++.|+..+
T Consensus        72 ~~~~~C~~C~k~f~~~~~l~~H~~~H-~~~~~C~~C~k~f~~~~~l~~H~~~h~~~~  127 (129)
T 2wbt_A           72 ISQFVCPLCLMPFSSSVSLKQHIRYT-EHTKVCPVCKKEFTSTDSALDHVCKKHNIC  127 (129)
T ss_dssp             HCSEECTTTCCEESSHHHHHHHHHHT-CCCCBCTTTCCBCSSHHHHHHHHHHTTCCC
T ss_pred             CCCeECCCCCcccCCHhHHHHHHHHC-CCCCCCCCCCcccCCHHHHHHHHHHHCCcc
Confidence            99999999999999999999999999 9999999 9999999999999999998654

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=2.4e-15  Score=116.81  Aligned_cols=77  Identities=21%  Similarity=0.404  Sum_probs=69.6

Q ss_pred             HHHHHHhcCCCcccccccccccCCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCC----CccccCcCCccccChhh
Q 014855           98 LQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGE----KKWKCEKCSKKYAVQSD  173 (417)
Q Consensus        98 L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~e----kp~~C~~C~k~F~~~~~  173 (417)
                      |.+|+++|.             ++++|.|.+|       ++.|.....|.+|++.|+++    ++|+|.+|++.|.....
T Consensus         3 ~~~H~~~H~-------------~~k~~~C~~C-------~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~   62 (86)
T 1x6h_A            3 SGSSGRTHT-------------GEKPYACSHC-------DKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT   62 (86)
T ss_dssp             TTCCSTTCC-------------CCCCEECSSS-------SCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHH
T ss_pred             cccccceec-------------CCCCCcCCCC-------CCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHH
Confidence            556788887             8899999999       99999999999999887765    78999999999999999


Q ss_pred             HHHHHHH-hCCCceeec-CCCcc
Q 014855          174 WKAHSKI-CGTREYKCD-CGKLF  194 (417)
Q Consensus       174 L~~H~~~-~~ekp~~C~-C~k~F  194 (417)
                      |..|+++ ++++++.|. |+..|
T Consensus        63 L~~H~~~h~~~~~~~~~~~~~~~   85 (86)
T 1x6h_A           63 MARHADNCAGPDGVEGENSGPSS   85 (86)
T ss_dssp             HHHHHHHCCCCCSCCCCCCCCCC
T ss_pred             HHHHHHHccCCCCcccCCCCCCC
Confidence            9999999 899999999 99876

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.54  E-value=6.4e-15  Score=113.89  Aligned_cols=76  Identities=25%  Similarity=0.538  Sum_probs=64.5

Q ss_pred             ceec--ccccccccChHHHHHHHHhcCCCcccccccccccCCceeeCCC--CCccCCCCCCcccCHHHHHHHHhhccCCC
Q 014855           82 RFLC--EICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPE--PTCVHHDPSRALGDLTGIKKHFSRKHGEK  157 (417)
Q Consensus        82 ~~~C--~~Cgk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~--C~C~~~~~~k~f~~~~~L~~H~~~H~~ek  157 (417)
                      +|+|  +.||+.|.....|..|+++|.             ++++|.|++  |       ++.|.....|.+|+++|++  
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~~~C-------~~~f~~~~~l~~H~~~h~~--   58 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHT-------------QQLPYECPHEGC-------DKRFSLPSRLKRHEKVHAG--   58 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHH-------------TTCCEECCSTTC-------CCEESSHHHHHHHHHHHHS--
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhC-------------CCCCeeCCCCCC-------cCccCCHHHHHHHHHHhCC--
Confidence            5788  888888888888888888887             778888887  7       8888888888888888887  


Q ss_pred             ccccCc---CCccccChhhHHHHHHH
Q 014855          158 KWKCEK---CSKKYAVQSDWKAHSKI  180 (417)
Q Consensus       158 p~~C~~---C~k~F~~~~~L~~H~~~  180 (417)
                       |.|.+   |++.|.....|..|+++
T Consensus        59 -~~C~~~~~C~~~f~~~~~l~~H~~~   83 (85)
T 2j7j_A           59 -YPCKKDDSCSFVGKTWTLYLKHVAE   83 (85)
T ss_dssp             -EECCSCSSCCCEESSHHHHHHHHHH
T ss_pred             -CCCCCCCCCCCccCCHHHHHHHHHh
Confidence             88888   88888888888888876

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.53  E-value=1.7e-14  Score=112.02  Aligned_cols=82  Identities=17%  Similarity=0.312  Sum_probs=72.2

Q ss_pred             hcCccccCCCCceecccccccccChHHHHHHHHhcCCCcccccccccccCCceeeCCCCCccCCCCCCcccCHHHHHHHH
Q 014855           71 ALSPKSLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHF  150 (417)
Q Consensus        71 ~~~~~~~~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~  150 (417)
                      ..+.+.|.++++|.|.+|++.|.....|.+|+++|+..         ...+++|.|.+|       ++.|.....|.+|+
T Consensus         4 ~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~---------~~~~~~~~C~~C-------~~~f~~~~~L~~H~   67 (86)
T 1x6h_A            4 GSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP---------NFVPAAFVCSKC-------GKTFTRRNTMARHA   67 (86)
T ss_dssp             TCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS---------SCCCCCEECSSS-------CCEESCHHHHHHHH
T ss_pred             ccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCC---------cCCCcceECCCC-------CChhCCHHHHHHHH
Confidence            45677889999999999999999999999999987721         001278999999       99999999999999


Q ss_pred             hhccCCCccccCcCCccc
Q 014855          151 SRKHGEKKWKCEKCSKKY  168 (417)
Q Consensus       151 ~~H~~ekp~~C~~C~k~F  168 (417)
                      ++|++++++.|..|+..|
T Consensus        68 ~~h~~~~~~~~~~~~~~~   85 (86)
T 1x6h_A           68 DNCAGPDGVEGENSGPSS   85 (86)
T ss_dssp             HHCCCCCSCCCCCCCCCC
T ss_pred             HHccCCCCcccCCCCCCC
Confidence            999999999999999876

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.53  E-value=1e-14  Score=111.57  Aligned_cols=69  Identities=22%  Similarity=0.453  Sum_probs=65.6

Q ss_pred             CCceeeCCC--CCccCCCCCCcccCHHHHHHHHh-hccCCCccccCc--CCccccChhhHHHHHHH-hCCCceeec-CCC
Q 014855          120 RKKVYVCPE--PTCVHHDPSRALGDLTGIKKHFS-RKHGEKKWKCEK--CSKKYAVQSDWKAHSKI-CGTREYKCD-CGK  192 (417)
Q Consensus       120 ~~k~~~C~~--C~C~~~~~~k~f~~~~~L~~H~~-~H~~ekp~~C~~--C~k~F~~~~~L~~H~~~-~~ekp~~C~-C~k  192 (417)
                      ++++|.|..  |       ++.|.....|.+|++ .|.++++|.|.+  |++.|..+..|.+|+++ +++++|.|. |++
T Consensus         4 ~~~~~~C~~~~C-------~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k   76 (79)
T 2dlk_A            4 GSSGMPCDFPGC-------GRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGP   76 (79)
T ss_dssp             CCSSEECSSTTT-------CCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSC
T ss_pred             CCCCccCCCCCC-------cCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCC
Confidence            678999997  7       999999999999999 799999999999  99999999999999999 899999999 999


Q ss_pred             ccC
Q 014855          193 LFS  195 (417)
Q Consensus       193 ~F~  195 (417)
                      .|.
T Consensus        77 ~F~   79 (79)
T 2dlk_A           77 SSG   79 (79)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            995

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.52  E-value=1.8e-14  Score=110.02  Aligned_cols=66  Identities=26%  Similarity=0.453  Sum_probs=58.4

Q ss_pred             ccCCCCceecccccccccChHHHHHHHHhcCCCcccccccccccCCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccC
Q 014855           76 SLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHG  155 (417)
Q Consensus        76 ~~~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~  155 (417)
                      .+.++++|.|++|++.|.....|.+|+++|.             ++++|.|.+|       ++.|.....|.+|+++|++
T Consensus        12 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~C-------~~~f~~~~~L~~H~~~H~~   71 (77)
T 2cot_A           12 QQRERRRYKCDECGKSFSHSSDLSKHRRTHT-------------GEKPYKCDEC-------GKAFIQRSHLIGHHRVHTG   71 (77)
T ss_dssp             CCCCSCSSBCSSSCCBCSCHHHHHHHHTTTC-------------CSCSEECSSS-------CCEESSHHHHHHHGGGSCC
T ss_pred             cCCCCCCEECCCCCcccCCHHHHHHHHHHcC-------------CCcCeeCCCC-------CCccCCHHHHHHHHHHhCC
Confidence            3455678999999999999999999999988             7889999998       9999999999999999999


Q ss_pred             CCcccc
Q 014855          156 EKKWKC  161 (417)
Q Consensus       156 ekp~~C  161 (417)
                      +++|+|
T Consensus        72 ~~p~~C   77 (77)
T 2cot_A           72 SGPSSG   77 (77)
T ss_dssp             CCCCCC
T ss_pred             CCCCCC
Confidence            999987

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.49  E-value=1.2e-14  Score=116.67  Aligned_cols=75  Identities=17%  Similarity=0.214  Sum_probs=67.8

Q ss_pred             CCcccCHHHHHHHHhhccCCCccccCcCCcccc-ChhhHHHHHHH-hC-CCceeec-CCCccCCchHHHHHHhhccccc
Q 014855          137 SRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYA-VQSDWKAHSKI-CG-TREYKCD-CGKLFSRRDSFITHRAFCDVLA  211 (417)
Q Consensus       137 ~k~f~~~~~L~~H~~~H~~ekp~~C~~C~k~F~-~~~~L~~H~~~-~~-ekp~~C~-C~k~F~~~~~L~~H~~~h~~~~  211 (417)
                      ...+.....+..|+++|.++++|.|.+|++.|. ....|++|+++ ++ +++|.|. |++.|.++..|.+|++.|+...
T Consensus         3 s~s~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~k   81 (98)
T 2gqj_A            3 SGSSGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAK   81 (98)
T ss_dssp             CCCCCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSC
T ss_pred             CCCCCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCC
Confidence            445666677889999999999999999999999 99999999999 77 8999999 9999999999999999987543

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.48  E-value=4.6e-14  Score=109.01  Aligned_cols=76  Identities=26%  Similarity=0.606  Sum_probs=71.2

Q ss_pred             eeeC--CCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCc--CCccccChhhHHHHHHH-hCCCceeec----CCCc
Q 014855          123 VYVC--PEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEK--CSKKYAVQSDWKAHSKI-CGTREYKCD----CGKL  193 (417)
Q Consensus       123 ~~~C--~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~--C~k~F~~~~~L~~H~~~-~~ekp~~C~----C~k~  193 (417)
                      +|.|  +.|       ++.|.....|..|+++|+++++|+|.+  |++.|.....|.+|+++ ++   |.|.    |++.
T Consensus         1 p~~C~~~~C-------~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~   70 (85)
T 2j7j_A            1 MYVCHFENC-------GKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFV   70 (85)
T ss_dssp             CEECCSTTC-------CCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCE
T ss_pred             CccCCCCCC-------CcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCc
Confidence            5889  878       999999999999999999999999988  99999999999999999 55   9993    9999


Q ss_pred             cCCchHHHHHHhhcc
Q 014855          194 FSRRDSFITHRAFCD  208 (417)
Q Consensus       194 F~~~~~L~~H~~~h~  208 (417)
                      |.....|.+|++.|+
T Consensus        71 f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           71 GKTWTLYLKHVAECH   85 (85)
T ss_dssp             ESSHHHHHHHHHHCC
T ss_pred             cCCHHHHHHHHHhcC
Confidence            999999999999875

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.47  E-value=4.6e-14  Score=106.83  Aligned_cols=65  Identities=23%  Similarity=0.438  Sum_probs=52.1

Q ss_pred             cccCCCCceecccccccccChHHHHHHHHhcCCCcccccccccccCCceeeCCCCCccCCCCCCcccCHHHHHHHHhhcc
Q 014855           75 KSLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKH  154 (417)
Q Consensus        75 ~~~~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~  154 (417)
                      ..+.++++|+|.+|++.|.....|.+|+++|.             ++++|.|.+|       ++.|.....|.+|+++|+
T Consensus        10 ~~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~-------------~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~   69 (74)
T 2lce_A           10 HMTHSDKPYKCDRCQASFRYKGNLASHKTVHT-------------GEKPYRCNIC-------GAQFNRPANLKTHTRIHS   69 (74)
T ss_dssp             -CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHC-------------CCCSEECTTT-------CCEESCHHHHHHHHHHHC
T ss_pred             cccCCCCCeECCCCCceeCCHHHHHHHHHHcC-------------CCCCEECCCC-------CchhCCHHHHHHHHHhcC
Confidence            34556677888888888888888888888887             7788888888       888888888888888888


Q ss_pred             CCCcc
Q 014855          155 GEKKW  159 (417)
Q Consensus       155 ~ekp~  159 (417)
                      +++||
T Consensus        70 ~~kp~   74 (74)
T 2lce_A           70 GEKPY   74 (74)
T ss_dssp             CSCCC
T ss_pred             CCCCC
Confidence            88775

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=2.6e-14  Score=115.79  Aligned_cols=70  Identities=17%  Similarity=0.270  Sum_probs=41.9

Q ss_pred             CCCCceecccccccccChHHHHHHHH-hcCCCcccccccccccCCceeeCCCCCccCCCCCCcccCHHHHHHH-HhhccC
Q 014855           78 MATNRFLCEICNKGFQRDQNLQLHRR-GHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKH-FSRKHG  155 (417)
Q Consensus        78 ~~~k~~~C~~Cgk~F~~~~~L~~H~~-~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H-~~~H~~  155 (417)
                      .++++|.|++||+.|..+..|.+|++ +|.+.          .++++|.|.+|       ++.|.....|.+| +++|++
T Consensus        14 ~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~----------~~ekpf~C~~C-------gk~F~~~~~L~~H~~r~Htg   76 (102)
T 2ghf_A           14 KVEGGYECKYCTFQTPDLNMFTFHVDSEHPNV----------VLNSSYVCVEC-------NFLTKRYDALSEHNLKYHPG   76 (102)
T ss_dssp             CCCSSEECSSCSCEESCHHHHHHHHHHHCSSC----------CCSCCEEETTT-------TEEESSTHHHHTHHHHTSTT
T ss_pred             CCCcCcCCCCCCCccCCHHHHHHHHHhhCCCC----------CCCCCcCCCCC-------CcccCCHHHHHHHHHHhcCC
Confidence            45566666666666666666666665 35200          04566666666       6666666666666 566666


Q ss_pred             CCccccCcC
Q 014855          156 EKKWKCEKC  164 (417)
Q Consensus       156 ekp~~C~~C  164 (417)
                      ++||+|.++
T Consensus        77 ekpy~C~~~   85 (102)
T 2ghf_A           77 EENFKLTMV   85 (102)
T ss_dssp             CCCEEEEEC
T ss_pred             CCCeeCCcc
Confidence            666666553

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.47  E-value=1.3e-14  Score=116.39  Aligned_cols=79  Identities=18%  Similarity=0.340  Sum_probs=71.4

Q ss_pred             cccChHHHHHHHHhcCCCcccccccccccCCceeeCCCCCccCCCCCCccc-CHHHHHHHHhhccC-CCccccCcCCccc
Q 014855           91 GFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALG-DLTGIKKHFSRKHG-EKKWKCEKCSKKY  168 (417)
Q Consensus        91 ~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~f~-~~~~L~~H~~~H~~-ekp~~C~~C~k~F  168 (417)
                      .+.....+..|+++|.             ++++|.|.+|       ++.|. ....|++|+++|++ +++|+|.+|++.|
T Consensus         5 s~~~~~~~~~h~~~h~-------------~~~~~~C~~C-------~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F   64 (98)
T 2gqj_A            5 SSGPGGPEEQWQRAIH-------------ERGEAVCPTC-------NVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQF   64 (98)
T ss_dssp             CCCCCCSCSHHHHTTT-------------TTSCCCCTTT-------CCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCC
T ss_pred             CCCCCCcHHHHHHHhc-------------cCCCcCCCCC-------CCChhhhHHHHHHHHHHHcCCCCCEECCCCCCcc
Confidence            4555566788999998             8999999999       99999 99999999999999 9999999999999


Q ss_pred             cChhhHHHHHHH-hCCCceeec
Q 014855          169 AVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       169 ~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      .++..|++|+++ ++++++...
T Consensus        65 ~~~~~L~~H~~~h~~~kp~~~~   86 (98)
T 2gqj_A           65 KSKAGLNYHTMAEHSAKPSDAE   86 (98)
T ss_dssp             SCHHHHHHHHHHHSCSCSSCCC
T ss_pred             CCHHHHHHHHHHHcCCCCCCCC
Confidence            999999999999 899886553

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.46  E-value=5.8e-14  Score=112.46  Aligned_cols=75  Identities=16%  Similarity=0.210  Sum_probs=58.9

Q ss_pred             cccChHHHHHHHHhcCCCcccccccccccCCceeeCCCCCccCCCCCCcc-cCHHHHHHHHhhccCCCccccCcCCcccc
Q 014855           91 GFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRAL-GDLTGIKKHFSRKHGEKKWKCEKCSKKYA  169 (417)
Q Consensus        91 ~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~f-~~~~~L~~H~~~H~~ekp~~C~~C~k~F~  169 (417)
                      .|.....|..|++.|.             ++++|.|++|       ++.| .....|+.|+++| ++++|.|.+|+|.|.
T Consensus        15 ~~~~~~~~~~~~~~~~-------------~~~~~~C~~C-------~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~   73 (96)
T 2ctd_A           15 VYAAGSLEEQWYLEIV-------------DKGSVSCPTC-------QAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLR   73 (96)
T ss_dssp             SSCTTCHHHHHHHHHH-------------HTSCEECTTT-------CSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCS
T ss_pred             CCCCchHHHHHHHHhc-------------CCCCcCCCCC-------CCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeC
Confidence            4556677778887777             6788888888       8888 7888888888888 888888888888888


Q ss_pred             ChhhHHHH-HHHhCCCce
Q 014855          170 VQSDWKAH-SKICGTREY  186 (417)
Q Consensus       170 ~~~~L~~H-~~~~~ekp~  186 (417)
                      .+..|+.| +++|.+++|
T Consensus        74 ~~~~L~~H~~~~H~~~p~   91 (96)
T 2ctd_A           74 SLAGMKYHVMANHNSLPS   91 (96)
T ss_dssp             SHHHHHHHHHHHTCCCSS
T ss_pred             CHHHHHHHhHHhcCCCCC
Confidence            88888888 666666554

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.45  E-value=5.6e-14  Score=107.17  Aligned_cols=63  Identities=24%  Similarity=0.559  Sum_probs=59.6

Q ss_pred             cCCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceee
Q 014855          119 ERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKC  188 (417)
Q Consensus       119 ~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C  188 (417)
                      .++++|.|.+|       ++.|.....|.+|+++|+++++|+|.+|++.|.....|.+|+++ ++++||+|
T Consensus        14 ~~~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           14 RERRRYKCDEC-------GKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCSCSSBCSSS-------CCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCCCEECCCC-------CcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            37899999999       99999999999999999999999999999999999999999999 89999988

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.44  E-value=3.5e-14  Score=108.33  Aligned_cols=66  Identities=17%  Similarity=0.359  Sum_probs=57.6

Q ss_pred             HHHHHhhccCCCccccCcCCccccChhhHHHHHHH-hC--CCceeec-CCCccCCchHHHHHHhhccccc
Q 014855          146 IKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CG--TREYKCD-CGKLFSRRDSFITHRAFCDVLA  211 (417)
Q Consensus       146 L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~--ekp~~C~-C~k~F~~~~~L~~H~~~h~~~~  211 (417)
                      |.+|+++|+++++|.|.+|++.|.....|..|++. |.  +++|.|. |++.|..+..|.+|++.++...
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~   72 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYS   72 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCS
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCC
Confidence            45789999999999999999999999999999974 43  3799999 9999999999999999887543

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.43  E-value=8.1e-14  Score=111.62  Aligned_cols=72  Identities=15%  Similarity=0.260  Sum_probs=67.2

Q ss_pred             CCcccCHHHHHHHHhhccCCCccccCcCCccc-cChhhHHHHHHHhCCCceeec-CCCccCCchHHHHH-Hhhcc
Q 014855          137 SRALGDLTGIKKHFSRKHGEKKWKCEKCSKKY-AVQSDWKAHSKICGTREYKCD-CGKLFSRRDSFITH-RAFCD  208 (417)
Q Consensus       137 ~k~f~~~~~L~~H~~~H~~ekp~~C~~C~k~F-~~~~~L~~H~~~~~ekp~~C~-C~k~F~~~~~L~~H-~~~h~  208 (417)
                      ...|.....|..|++.|+++++|+|.+|++.| .....|+.|+++|++++|.|. |++.|..+..|++| +++|.
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~   87 (96)
T 2ctd_A           13 PPVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENCKQEMFTCHHCGKQLRSLAGMKYHVMANHN   87 (96)
T ss_dssp             CCSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHHCCCCCCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred             CCCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHHCCCCeECCCCCCeeCCHHHHHHHhHHhcC
Confidence            45677788899999999999999999999999 999999999999989999999 99999999999999 88875

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.42  E-value=1.3e-13  Score=111.70  Aligned_cols=67  Identities=16%  Similarity=0.207  Sum_probs=61.3

Q ss_pred             cCCceeeCCCCCccCCCCCCcccCHHHHHHHHh-hc---cCCCccccCcCCccccChhhHHHH-HHH-hCCCceeec-CC
Q 014855          119 ERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFS-RK---HGEKKWKCEKCSKKYAVQSDWKAH-SKI-CGTREYKCD-CG  191 (417)
Q Consensus       119 ~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~-~H---~~ekp~~C~~C~k~F~~~~~L~~H-~~~-~~ekp~~C~-C~  191 (417)
                      .++++|.|.+|       ++.|..+..|.+|++ .|   .++++|+|.+||+.|..+..|..| +++ .|++||.|. +.
T Consensus        14 ~gekpy~C~~C-------gk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~   86 (102)
T 2ghf_A           14 KVEGGYECKYC-------TFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVK   86 (102)
T ss_dssp             CCCSSEECSSC-------SCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECC
T ss_pred             CCCcCcCCCCC-------CCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCccc
Confidence            38899999999       999999999999998 58   678999999999999999999999 788 899999997 54


Q ss_pred             C
Q 014855          192 K  192 (417)
Q Consensus       192 k  192 (417)
                      +
T Consensus        87 ~   87 (102)
T 2ghf_A           87 R   87 (102)
T ss_dssp             C
T ss_pred             C
Confidence            3

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.41  E-value=2.5e-13  Score=101.49  Aligned_cols=62  Identities=19%  Similarity=0.323  Sum_probs=35.2

Q ss_pred             cCCCCceecccccccccChHHHHHHHHhcCCCcccccccccccCCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCC
Q 014855           77 LMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGE  156 (417)
Q Consensus        77 ~~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~e  156 (417)
                      +.++++|+|++|++.|.....|.+|+++|.             ++++|.|.+|       ++.|.....|.+|+++|+++
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~-------------~~~~~~C~~C-------~~~f~~~~~L~~H~~~h~~~   63 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHERIHC-------------TDRPFKCNYC-------SFDTKQPSNLSKHMKKFHGD   63 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHGGGC-------------CSCSEECSSS-------SCEESSHHHHHHHHHHHHSS
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcC-------------CCCCEeCCCC-------CCccCCHHHHHHHHHHHhCC
Confidence            344555555555555555555555555555             4555555555       55555555555555555555


Q ss_pred             Cc
Q 014855          157 KK  158 (417)
Q Consensus       157 kp  158 (417)
                      ++
T Consensus        64 ~p   65 (70)
T 1x5w_A           64 MS   65 (70)
T ss_dssp             SC
T ss_pred             CC
Confidence            44

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.40  E-value=2.4e-13  Score=102.79  Aligned_cols=61  Identities=23%  Similarity=0.548  Sum_probs=53.9

Q ss_pred             cCCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCce
Q 014855          119 ERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREY  186 (417)
Q Consensus       119 ~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~  186 (417)
                      .++++|.|.+|       ++.|.....|.+|+++|+++++|+|.+|++.|.....|.+|+++ ++++||
T Consensus        13 ~~~~~~~C~~C-------~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           13 HSDKPYKCDRC-------QASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCSBCCTTS-------SCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             CCCCCeECCCC-------CceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            37788999998       89999999999999999999999999999999999999999988 778876

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.39  E-value=1.6e-13  Score=101.21  Aligned_cols=58  Identities=29%  Similarity=0.612  Sum_probs=37.7

Q ss_pred             hhccCCCccccCcCCccccChhhHHHHHHH-h--CCCceeec-CCCccCCchHHHHHHhhcc
Q 014855          151 SRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-C--GTREYKCD-CGKLFSRRDSFITHRAFCD  208 (417)
Q Consensus       151 ~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~--~ekp~~C~-C~k~F~~~~~L~~H~~~h~  208 (417)
                      ++|+++++|.|.+|++.|.....|..|+++ |  ++++|.|+ |++.|.++..|.+|++.|+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H   64 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH   64 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHc
Confidence            456666666666666666666666666665 4  45666666 6666666666666666654

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.38  E-value=5.2e-13  Score=99.80  Aligned_cols=61  Identities=20%  Similarity=0.244  Sum_probs=51.3

Q ss_pred             cCCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCce
Q 014855          119 ERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREY  186 (417)
Q Consensus       119 ~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~  186 (417)
                      .++++|.|.+|       ++.|.....|.+|+++|+++++|+|.+|++.|.....|.+|+++ +++++.
T Consensus         5 ~~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A            5 SSGHPEKCSEC-------SYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             CCCCSEECSSS-------SCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCCCCeECCCC-------CcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCC
Confidence            47788888888       88888888888888888888888888888888888888888888 777663

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.37  E-value=6.4e-13  Score=99.93  Aligned_cols=62  Identities=26%  Similarity=0.415  Sum_probs=38.9

Q ss_pred             cccCCCCceecccccccccChHHHHHHHHhcCCCcccccccccccCCceeeCCCCCccCCCCCCcccCHHHHHHHHhhcc
Q 014855           75 KSLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKH  154 (417)
Q Consensus        75 ~~~~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~  154 (417)
                      +.|.++++|+|++|++.|.....|.+|+++|.             ++++|.|.+|       ++.|.....|.+|+++|+
T Consensus         7 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~-------------~~~~~~C~~C-------~~~f~~~~~L~~H~~~H~   66 (72)
T 1x6e_A            7 GIHSGEKPYGCVECGKAFSRSSILVQHQRVHT-------------GEKPYKCLEC-------GKAFSQNSGLINHQRIHT   66 (72)
T ss_dssp             CTTTTCCCEECSSSCCEESSHHHHHHHHHGGG-------------CSCCEECSSS-------CCEESSHHHHHHHHHHHH
T ss_pred             cccCCCCCccCCCCCCccCCHHHHHHHHHhcC-------------CCCCeECCCC-------CcccCCHHHHHHHHHhcC
Confidence            34555666666666666666666666666665             5566666666       666666666666666665


Q ss_pred             CC
Q 014855          155 GE  156 (417)
Q Consensus       155 ~e  156 (417)
                      ++
T Consensus        67 ~~   68 (72)
T 1x6e_A           67 SG   68 (72)
T ss_dssp             SS
T ss_pred             CC
Confidence            54

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.37  E-value=1.7e-13  Score=115.05  Aligned_cols=82  Identities=16%  Similarity=0.238  Sum_probs=72.4

Q ss_pred             CCCceeccccccccc------ChHHHHHHHHhcCCCcccccccccccCCceeeCCCCCccCCCCCCcccCHHHHHHHHhh
Q 014855           79 ATNRFLCEICNKGFQ------RDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSR  152 (417)
Q Consensus        79 ~~k~~~C~~Cgk~F~------~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~  152 (417)
                      ..+.|.|++|++.|.      ....|..|+ .|+             ++++|.|.+|       ++.|.....|.+|+++
T Consensus        38 ~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~-------------~~~~~~C~~C-------~k~f~~~~~l~~H~~~   96 (129)
T 2wbt_A           38 EQKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASK-------------AISQFVCPLC-------LMPFSSSVSLKQHIRY   96 (129)
T ss_dssp             HHHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHH-------------HHCSEECTTT-------CCEESSHHHHHHHHHH
T ss_pred             hhCcccchhhhcccCCCcccCCHHHHHHHH-HhC-------------CCCCeECCCC-------CcccCCHhHHHHHHHH
Confidence            356789999988877      556677777 566             7899999999       9999999999999999


Q ss_pred             ccCCCccccCcCCccccChhhHHHHHHH-hCC
Q 014855          153 KHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGT  183 (417)
Q Consensus       153 H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~e  183 (417)
                      |  +++|.|.+|++.|.....|.+|+++ +|.
T Consensus        97 H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           97 T--EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             T--CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             C--CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            9  8999999999999999999999999 654

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.35  E-value=9.6e-13  Score=100.43  Aligned_cols=59  Identities=24%  Similarity=0.504  Sum_probs=46.8

Q ss_pred             hccCCCccccCcCCccccChhhHHHHHHH-hC---CCceeec-CCCccCCchHHHHHHhhcccc
Q 014855          152 RKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CG---TREYKCD-CGKLFSRRDSFITHRAFCDVL  210 (417)
Q Consensus       152 ~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~---ekp~~C~-C~k~F~~~~~L~~H~~~h~~~  210 (417)
                      .|+++++|+|.+|++.|.....|.+|+++ ++   +++|.|. |++.|..+..|.+|++.+|..
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~   64 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPA   64 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTT
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCC
Confidence            36788888888888888888888888887 43   7888888 888888888888888665533

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.34  E-value=7.4e-13  Score=94.52  Aligned_cols=53  Identities=21%  Similarity=0.317  Sum_probs=27.0

Q ss_pred             CceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcCCccccChhhHHHHHHH
Q 014855          121 KKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI  180 (417)
Q Consensus       121 ~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~  180 (417)
                      +++|.|.+|       ++.|.....|..|+++|+++++|.|.+|++.|.....|..|+++
T Consensus         2 ~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   54 (57)
T 3uk3_C            2 SSSRECSYC-------GKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLER   54 (57)
T ss_dssp             ---CBCTTT-------CCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCCccCCCC-------cchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHH
Confidence            345555555       55555555555555555555555555555555555555555544

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.34  E-value=1.7e-12  Score=101.51  Aligned_cols=62  Identities=18%  Similarity=0.349  Sum_probs=49.6

Q ss_pred             ccCCCCceecccccccccChHHHHHHHHhcCCCcccccccccccCCceeeCCCCCccCCCCCCcccCHHHHHHHH-hhcc
Q 014855           76 SLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHF-SRKH  154 (417)
Q Consensus        76 ~~~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~-~~H~  154 (417)
                      .+...+.|.|++||+.|..+..|.+|+++|+             ++++|.|.+|       ++.|..+..|.+|+ +.|.
T Consensus        22 ~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~-------------~~k~~~C~~C-------~k~F~~~~~L~~H~~~~H~   81 (85)
T 2lv2_A           22 LSASAECHLCPVCGESFASKGAQERHLRLLH-------------AAQVFPCKYC-------PATFYSSPGLTRHINKCHP   81 (85)
T ss_dssp             SCCCCTTEECTTSCCEESSHHHHHHHHHTTS-------------CSSSEECTTS-------SCEESSHHHHHHHHHTTCT
T ss_pred             CCCCCCCEECCCCCCCcCcHHHHhhhhhhcc-------------CCCccCCCCC-------CCEeCCHHHHHHhCcccCc
Confidence            3445667888888888888888888888888             7888888888       88888888888886 4577


Q ss_pred             CCC
Q 014855          155 GEK  157 (417)
Q Consensus       155 ~ek  157 (417)
                      +|+
T Consensus        82 ~E~   84 (85)
T 2lv2_A           82 SEN   84 (85)
T ss_dssp             TCC
T ss_pred             CCC
Confidence            664

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.33  E-value=8.5e-13  Score=99.24  Aligned_cols=54  Identities=30%  Similarity=0.526  Sum_probs=31.2

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcCCccccChhhHHHHHHH
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI  180 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~  180 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|.+|++.|.....|.+|+++
T Consensus        11 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~   64 (72)
T 1x6e_A           11 GEKPYGCVEC-------GKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRI   64 (72)
T ss_dssp             TCCCEECSSS-------CCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCCCccCCCC-------CCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHh
Confidence            5555555555       55555555555555555555555555555555555555555555

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.31  E-value=5.8e-13  Score=101.45  Aligned_cols=66  Identities=21%  Similarity=0.303  Sum_probs=58.5

Q ss_pred             HHHHHHhcCCCcccccccccccCCceeeCCCCCccCCCCCCcccCHHHHHHHHh-hccCC-CccccCcCCccccChhhHH
Q 014855           98 LQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFS-RKHGE-KKWKCEKCSKKYAVQSDWK  175 (417)
Q Consensus        98 L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~-~H~~e-kp~~C~~C~k~F~~~~~L~  175 (417)
                      |.+|+++|.             ++++|.|.+|       ++.|.....|.+|++ .|.++ ++|+|.+|++.|.....|.
T Consensus         3 ~~~H~~~H~-------------~~k~~~C~~C-------~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~   62 (77)
T 2ct1_A            3 SGSSGRTHS-------------GEKPYECYIC-------HARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG   62 (77)
T ss_dssp             CCCCCCCCS-------------CCCSEECTTT-------CCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHH
T ss_pred             CCccccccC-------------CCCCeECCCc-------CchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHH
Confidence            445777777             8999999999       999999999999997 67764 8999999999999999999


Q ss_pred             HHHHH-hCC
Q 014855          176 AHSKI-CGT  183 (417)
Q Consensus       176 ~H~~~-~~e  183 (417)
                      .|+++ |+.
T Consensus        63 ~H~~~~H~~   71 (77)
T 2ct1_A           63 VHLRKQHSY   71 (77)
T ss_dssp             HHHHHTSCC
T ss_pred             HHHHHhCCC
Confidence            99998 543

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.30  E-value=3.2e-12  Score=99.89  Aligned_cols=54  Identities=13%  Similarity=0.358  Sum_probs=36.4

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcCCccccChhhHHHHHHH
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI  180 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~  180 (417)
                      ..++|.|++|       ++.|..+..|.+|+++|++++||.|.+|++.|.++..|.+|++.
T Consensus        25 ~~~~h~C~~C-------gk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~   78 (85)
T 2lv2_A           25 SAECHLCPVC-------GESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINK   78 (85)
T ss_dssp             CCTTEECTTS-------CCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHT
T ss_pred             CCCCEECCCC-------CCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcc
Confidence            4556666666       66666666666666666666666666666666666666666544

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.29  E-value=2e-12  Score=92.20  Aligned_cols=54  Identities=22%  Similarity=0.471  Sum_probs=48.7

Q ss_pred             CCCccccCcCCccccChhhHHHHHHH-hCCCceeec-CCCccCCchHHHHHHhhcc
Q 014855          155 GEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD-CGKLFSRRDSFITHRAFCD  208 (417)
Q Consensus       155 ~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~-C~k~F~~~~~L~~H~~~h~  208 (417)
                      |+++|.|.+|++.|.....|..|+++ +++++|.|. |++.|..+..|.+|++.|+
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            57899999999999999999999999 899999999 9999999999999999886

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.28  E-value=3.7e-12  Score=90.84  Aligned_cols=56  Identities=23%  Similarity=0.454  Sum_probs=36.9

Q ss_pred             ceecccccccccChHHHHHHHHhcCCCcccccccccccCCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCC
Q 014855           82 RFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEK  157 (417)
Q Consensus        82 ~~~C~~Cgk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ek  157 (417)
                      +|.|++|++.|.....|..|+++|.             ++++|.|.+|       ++.|.....|.+|+++|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHT-------------DVRPYHCTYC-------NFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTS-------------SCCCEECSSS-------SCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcC-------------CCCCccCCCC-------CchhcCHHHHHHHHHHhcccC
Confidence            3666666666666666666666666             5666666666       666666666666666666654

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=4.4e-12  Score=96.66  Aligned_cols=64  Identities=16%  Similarity=0.256  Sum_probs=36.2

Q ss_pred             cCCCCceecccccccccChHHHHHHHHhcCCCcccccccccccC---CceeeCCCCCccCCCCCCcccCHHHHHHHH-hh
Q 014855           77 LMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVER---KKVYVCPEPTCVHHDPSRALGDLTGIKKHF-SR  152 (417)
Q Consensus        77 ~~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~---~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~-~~  152 (417)
                      |.++++|+|++|++.|..+..|.+|+++|.             +   +++|.|.+|       ++.|.....|.+|+ +.
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~-------------~~~~~~~~~C~~C-------~k~f~~~~~L~~H~~~~   61 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHA-------------ETVAALRFPCEFC-------GKRFEKPDSVAAHRSKS   61 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHH-------------HHTTTCCEECTTT-------CCEESSHHHHHHHHHHT
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhh-------------ccCCCcccCCCCC-------CchhCCHHHHHHHHHHh
Confidence            345556666666666666666666666654             2   455666665       56666666666665 33


Q ss_pred             ccCCCccc
Q 014855          153 KHGEKKWK  160 (417)
Q Consensus       153 H~~ekp~~  160 (417)
                      |.++++..
T Consensus        62 H~~~~~~~   69 (78)
T 2d9h_A           62 HPALLLAP   69 (78)
T ss_dssp             STTTSSCC
T ss_pred             CCCCCCCc
Confidence            44444433

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.26  E-value=3.6e-12  Score=93.80  Aligned_cols=57  Identities=25%  Similarity=0.484  Sum_probs=53.5

Q ss_pred             cCCceeeCCCCCccCCCCCCcccCHHHHHHHHhh-c-cCCCccccCcCCccccChhhHHHHHHH-hC
Q 014855          119 ERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSR-K-HGEKKWKCEKCSKKYAVQSDWKAHSKI-CG  182 (417)
Q Consensus       119 ~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~-H-~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~  182 (417)
                      .++++|.|++|       ++.|.....|.+|++. | .++++|.|.+|++.|.....|..|+++ |+
T Consensus         6 ~~~k~~~C~~C-------~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            6 EGEHTYRCKVC-------SRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             EETTEEECTTT-------CCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             CCCcceECCCC-------cchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            38999999999       9999999999999998 7 589999999999999999999999998 64

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.23  E-value=7.8e-12  Score=89.09  Aligned_cols=55  Identities=18%  Similarity=0.422  Sum_probs=40.7

Q ss_pred             eeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCC
Q 014855          123 VYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTR  184 (417)
Q Consensus       123 ~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ek  184 (417)
                      +|.|.+|       ++.|.....|..|+++|+++++|.|.+|++.|.....|..|+++ ++++
T Consensus         1 p~~C~~C-------~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEEC-------GIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTT-------CCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCC-------cCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            4677777       77777777777777777777777777777777777777777776 4443

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.21  E-value=9.6e-12  Score=98.27  Aligned_cols=62  Identities=18%  Similarity=0.218  Sum_probs=49.3

Q ss_pred             CceecccccccccChHHHHHHHHh-cCCCcccccccccccCCce--------eeCCCCCccCCCCCCcccCHHHHHHHHh
Q 014855           81 NRFLCEICNKGFQRDQNLQLHRRG-HNLPWKLKQRTNKVERKKV--------YVCPEPTCVHHDPSRALGDLTGIKKHFS  151 (417)
Q Consensus        81 k~~~C~~Cgk~F~~~~~L~~H~~~-H~~p~~~~~~~~~~~~~k~--------~~C~~C~C~~~~~~k~f~~~~~L~~H~~  151 (417)
                      ..|.|++|++.|.....|.+|+++ |.             ++++        |.|.+|       ++.|.....|.+|++
T Consensus        24 ~~~~C~~C~k~f~~~~~L~~H~~~~H~-------------~~~~~~~~~c~~~~C~~C-------~k~f~~~~~L~~H~~   83 (95)
T 2ej4_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHV-------------GGPEQNNHVCYWEECPRE-------GKSFKAKYKLVNHIR   83 (95)
T ss_dssp             SSSSCCCCCCCCSSHHHHHHHHHHTTT-------------CCTTCSCCCCCCTTCSST-------TCCCSSHHHHHHHHH
T ss_pred             CCCcccccccccCCHHHHHHHHHHhcc-------------CCCCCCccceeccCCCCC-------CcccCCHHHHHHHHH
Confidence            347899999999999999999988 76             4555        677777       777887788888888


Q ss_pred             hccCCCccccC
Q 014855          152 RKHGEKKWKCE  162 (417)
Q Consensus       152 ~H~~ekp~~C~  162 (417)
                      +|+++++|+|.
T Consensus        84 ~H~~~k~~~C~   94 (95)
T 2ej4_A           84 VHTGEKSGPSS   94 (95)
T ss_dssp             HHHTCCCCSSC
T ss_pred             hcCCCCCCCCC
Confidence            88877777775

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.20  E-value=1.6e-11  Score=88.42  Aligned_cols=54  Identities=31%  Similarity=0.637  Sum_probs=32.2

Q ss_pred             ceecccccccccChHHHHHHHHhcCCCcccccccccccCCceeeCCCCCccCCCCCCcccCHHHHHHHH-hhccC
Q 014855           82 RFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHF-SRKHG  155 (417)
Q Consensus        82 ~~~C~~Cgk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~-~~H~~  155 (417)
                      +|.|++|++.|.....|.+|+++|.             ++++|.|.+|       ++.|.....|.+|+ +.|.+
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~C-------~~~f~~~~~l~~H~~~~H~~   56 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYRSHT-------------NEKPYPCGLC-------NRAFTRRDLLIRHAQKIHSG   56 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTT-------------SSCSEECTTT-------CCEESSHHHHHHHHTTTSCC
T ss_pred             cCcCCCCccccCCHHHHHHHHHHhC-------------CCCCccCCCC-------CCccCCHHHHHHHHHHHcCC
Confidence            4666666666666666666666665             5556666665       66666666666664 34544

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.20  E-value=1.2e-11  Score=92.90  Aligned_cols=56  Identities=23%  Similarity=0.590  Sum_probs=41.4

Q ss_pred             hccCCCccccC--cCCccccChhhHHHHHHH-hCCCceeec-CCCccCCchHHHHHHhhc
Q 014855          152 RKHGEKKWKCE--KCSKKYAVQSDWKAHSKI-CGTREYKCD-CGKLFSRRDSFITHRAFC  207 (417)
Q Consensus       152 ~H~~ekp~~C~--~C~k~F~~~~~L~~H~~~-~~ekp~~C~-C~k~F~~~~~L~~H~~~h  207 (417)
                      .|.++++|.|.  .|++.|.....|..|+++ +++++|.|. |++.|..+..|.+|+++|
T Consensus        13 ~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G           13 VVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             CCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTC
T ss_pred             cCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhc
Confidence            46667777775  477777777777777777 677777777 777777777777777765

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.18  E-value=2e-11  Score=87.94  Aligned_cols=50  Identities=22%  Similarity=0.542  Sum_probs=32.7

Q ss_pred             eeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcCCccccChhhHHHHHH
Q 014855          123 VYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSK  179 (417)
Q Consensus       123 ~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~  179 (417)
                      +|.|.+|       ++.|.....|.+|+++|+++++|.|.+|++.|.....|..|++
T Consensus         2 ~~~C~~C-------~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   51 (60)
T 2adr_A            2 SFVCEVC-------TRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQ   51 (60)
T ss_dssp             CBCCTTT-------CCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHT
T ss_pred             cCcCCCC-------ccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHH
Confidence            5666666       6666666666666666666666666666666666666666653

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=7.3e-14  Score=104.75  Aligned_cols=69  Identities=13%  Similarity=0.161  Sum_probs=57.4

Q ss_pred             hHHHHHHHHhcCCCcccccccccccCCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcCCccccChhhH
Q 014855           95 DQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDW  174 (417)
Q Consensus        95 ~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L  174 (417)
                      +..|..|+++|.             ++++|.|.+|       ++.|.....|..       +++|.|.+|++.|.....|
T Consensus         3 ~~~l~~H~~~h~-------------~~~~~~C~~C-------~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l   55 (73)
T 2ctu_A            3 SGSSGKRQKIHL-------------GDRSQKCSKC-------GIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAAL   55 (73)
T ss_dssp             CCSCCCCCCCCC-------------CCSEEECSSS-------CCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSS
T ss_pred             chhHHHHHHHhC-------------CCCCeeCCcc-------cchhCCHHHhCc-------CCCCCCCCCChhhcCHHHH
Confidence            345667777777             7888999998       888888887776       7889999999999999999


Q ss_pred             HHHHHH-hCCCceeec-C
Q 014855          175 KAHSKI-CGTREYKCD-C  190 (417)
Q Consensus       175 ~~H~~~-~~ekp~~C~-C  190 (417)
                      ..|+++ +++++|.|+ |
T Consensus        56 ~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A           56 NKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CCCSSCCCCCCCSSCCCC
T ss_pred             HHHHHhhcCCCCCCCCCC
Confidence            999888 788899887 7

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.13  E-value=5.1e-11  Score=94.02  Aligned_cols=61  Identities=11%  Similarity=0.206  Sum_probs=56.5

Q ss_pred             ceeeCCCCCccCCCCCCcccCHHHHHHHHhh-ccCCCc--------cccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          122 KVYVCPEPTCVHHDPSRALGDLTGIKKHFSR-KHGEKK--------WKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       122 k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~-H~~ekp--------~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      ..|.|..|       ++.|.....|.+|+++ |.++++        |.|.+|++.|..+..|.+|+++ +++++|.|+
T Consensus        24 ~~~~C~~C-------~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           24 LSRPKKSC-------DRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSSSCCCC-------CCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CCCccccc-------ccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            44778888       9999999999999998 999888        9999999999999999999999 899999984

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.12  E-value=6.7e-11  Score=88.72  Aligned_cols=57  Identities=21%  Similarity=0.438  Sum_probs=33.1

Q ss_pred             cCCCCceecc--cccccccChHHHHHHHHhcCCCcccccccccccCCceeeCCCCCccCCCCCCcccCHHHHHHHHhhc
Q 014855           77 LMATNRFLCE--ICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRK  153 (417)
Q Consensus        77 ~~~~k~~~C~--~Cgk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H  153 (417)
                      +.++++|.|.  .|++.|.....|.+|+++|.             ++++|.|.+|       ++.|.....|.+|+++|
T Consensus        14 ~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~-------------~~~~~~C~~C-------~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G           14 VPKMRPYACPVESCDRRFSRSDELTRHIRIHT-------------GQKPFQCRIC-------MRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             CCCCCCEECSSTTBCCEESSHHHHHHHHHHHH-------------CCCCEECTTT-------CCEESCHHHHHHHHTTC
T ss_pred             CCCCCccCCcCCCCCCccCCHHHHHHHHHhhC-------------CCCCeECCCC-------CchhCCHHHHHHHHHhc
Confidence            4445556664  36666666666666666555             5555666655       55666666666665555

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=8.7e-11  Score=86.63  Aligned_cols=52  Identities=17%  Similarity=0.259  Sum_probs=28.0

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccC-cCCccccChhhHHHHHHH
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCE-KCSKKYAVQSDWKAHSKI  180 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~-~C~k~F~~~~~L~~H~~~  180 (417)
                      ++++|.|..|       ++.|. ...|..|+++ +++++|.|. +||+.|..+..|..|+++
T Consensus         7 ~~~~~~C~~C-------~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~   59 (66)
T 2eod_A            7 GKRTQPCTYC-------TKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKD   59 (66)
T ss_dssp             CCCEEECSSS-------CCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHT
T ss_pred             CCCCeecccc-------CCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHh
Confidence            3455555555       55555 5555555555 555555555 555555555555555554

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=1.3e-12  Score=97.80  Aligned_cols=69  Identities=16%  Similarity=0.186  Sum_probs=62.3

Q ss_pred             hhhcCccccCCCCceecccccccccChHHHHHHHHhcCCCcccccccccccCCceeeCCCCCccCCCCCCcccCHHHHHH
Q 014855           69 VIALSPKSLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKK  148 (417)
Q Consensus        69 ~~~~~~~~~~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~  148 (417)
                      .+..+.+.|.++++|.|++||+.|.....|..                    +++|.|.+|       ++.|.....|.+
T Consensus         5 ~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~--------------------~~~~~C~~C-------~~~f~~~~~l~~   57 (73)
T 2ctu_A            5 SSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR--------------------RKTPMCEKC-------RKDSCQEAALNK   57 (73)
T ss_dssp             SCCCCCCCCCCCSEEECSSSCCEEECCCCCCC--------------------SSSCCCHHH-------HHTCSCCCSSCC
T ss_pred             hHHHHHHHhCCCCCeeCCcccchhCCHHHhCc--------------------CCCCCCCCC-------ChhhcCHHHHHH
Confidence            35567788999999999999999999888764                    467999999       999999999999


Q ss_pred             HHhhccCCCccccCcC
Q 014855          149 HFSRKHGEKKWKCEKC  164 (417)
Q Consensus       149 H~~~H~~ekp~~C~~C  164 (417)
                      |+++|+++++|.|.+|
T Consensus        58 H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A           58 DEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CSSCCCCCCCSSCCCC
T ss_pred             HHHhhcCCCCCCCCCC
Confidence            9999999999999998

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=3.9e-11  Score=81.56  Aligned_cols=43  Identities=21%  Similarity=0.400  Sum_probs=33.9

Q ss_pred             HHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec-C
Q 014855          148 KHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD-C  190 (417)
Q Consensus       148 ~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~-C  190 (417)
                      +|+++|+++++|.|.+|++.|.+...|.+|+++ +++++|.|. |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            467778888888888888888888888888877 677888887 6

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.06  E-value=3.9e-11  Score=81.72  Aligned_cols=43  Identities=21%  Similarity=0.452  Sum_probs=31.9

Q ss_pred             HHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec-C
Q 014855          148 KHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD-C  190 (417)
Q Consensus       148 ~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~-C  190 (417)
                      +|+++|+++++|.|.+|++.|..+..|.+|+++ +++++|.|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            466777777777777777777777777777777 677777776 5

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=2.9e-11  Score=82.38  Aligned_cols=43  Identities=21%  Similarity=0.334  Sum_probs=34.3

Q ss_pred             HHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec-C
Q 014855          148 KHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD-C  190 (417)
Q Consensus       148 ~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~-C  190 (417)
                      +|+++|+++++|.|.+||+.|.....|..|+++ +++++|.|. |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            467778888888888888888888888888877 777888887 6

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=4.3e-11  Score=81.45  Aligned_cols=43  Identities=26%  Similarity=0.414  Sum_probs=33.1

Q ss_pred             HHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec-C
Q 014855          148 KHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD-C  190 (417)
Q Consensus       148 ~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~-C  190 (417)
                      +|+++|+++++|.|.+|++.|.....|.+|+++ +++++|.|. |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            467777777788888888888888888888777 677777776 6

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=5.2e-11  Score=80.95  Aligned_cols=43  Identities=30%  Similarity=0.484  Sum_probs=33.3

Q ss_pred             HHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec-C
Q 014855          148 KHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD-C  190 (417)
Q Consensus       148 ~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~-C  190 (417)
                      +|+++|+++++|.|.+|++.|.....|.+|+++ +++++|.|. |
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            467777778888888888888888888888777 677778776 6

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=1.2e-10  Score=85.79  Aligned_cols=55  Identities=20%  Similarity=0.404  Sum_probs=51.1

Q ss_pred             ccCCCccccCcCCccccChhhHHHHHHHhCCCceeec--CCCccCCchHHHHHHhhcc
Q 014855          153 KHGEKKWKCEKCSKKYAVQSDWKAHSKICGTREYKCD--CGKLFSRRDSFITHRAFCD  208 (417)
Q Consensus       153 H~~ekp~~C~~C~k~F~~~~~L~~H~~~~~ekp~~C~--C~k~F~~~~~L~~H~~~h~  208 (417)
                      +.++++|.|.+|++.|. ...|..|+++++++||.|+  |++.|..+..|.+|+++|.
T Consensus         5 ~C~~~~~~C~~C~k~f~-~~~L~~H~~~~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc   61 (66)
T 2eod_A            5 SSGKRTQPCTYCTKEFV-FDTIQSHQYQCPRLPVACPNQCGVGTVAREDLPGHLKDSC   61 (66)
T ss_dssp             CCCCCEEECSSSCCEEE-HHHHHHHHHHCSSSEEECTTCCSCCEEETTTHHHHHHTTS
T ss_pred             cCCCCCeeccccCCccC-HHHHHHHHHHcCCcCccCCcccCcccccHHHHHHHHHhhc
Confidence            34679999999999999 9999999988899999997  9999999999999999874

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.05  E-value=4e-11  Score=81.58  Aligned_cols=42  Identities=31%  Similarity=0.548  Sum_probs=28.3

Q ss_pred             HHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          148 KHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       148 ~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      +|+++|+++++|.|.+|++.|.....|.+|+++ +++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS   44 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSS
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCC
Confidence            356666666667776677777666667666666 566666665

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=5.3e-11  Score=80.19  Aligned_cols=42  Identities=21%  Similarity=0.321  Sum_probs=28.5

Q ss_pred             HHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec-C
Q 014855          149 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD-C  190 (417)
Q Consensus       149 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~-C  190 (417)
                      |+++|+++++|.|.+||+.|.....|.+|+++ +++++|.|+ |
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45666667777777777777777777777666 566677666 5

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.05  E-value=6.2e-11  Score=80.69  Aligned_cols=42  Identities=29%  Similarity=0.476  Sum_probs=32.9

Q ss_pred             HHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec-C
Q 014855          149 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD-C  190 (417)
Q Consensus       149 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~-C  190 (417)
                      |+++|+++++|+|.+|++.|.++..|.+|+++ +++++|+|. |
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            66777788888888888888888888888777 677788876 6

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=4.5e-11  Score=81.33  Aligned_cols=43  Identities=26%  Similarity=0.416  Sum_probs=32.1

Q ss_pred             HHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec-C
Q 014855          148 KHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD-C  190 (417)
Q Consensus       148 ~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~-C  190 (417)
                      +|+++|+++++|.|.+|++.|..+..|.+|+++ +++++|.|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            466777777777777777777777777777777 677777776 5

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=4.4e-11  Score=81.40  Aligned_cols=43  Identities=19%  Similarity=0.402  Sum_probs=30.5

Q ss_pred             HHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec-C
Q 014855          148 KHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD-C  190 (417)
Q Consensus       148 ~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~-C  190 (417)
                      +|+++|+++++|+|.+||+.|..+..|..|+++ +++++|.|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            366677777777777777777777777777777 667777776 5

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=3.9e-11  Score=81.65  Aligned_cols=42  Identities=24%  Similarity=0.479  Sum_probs=27.2

Q ss_pred             HHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          148 KHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       148 ~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      +|+++|+++++|+|.+|++.|.....|.+|+++ +++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSS
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            355666666666666666666666666666666 566666665

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=4.3e-11  Score=81.43  Aligned_cols=41  Identities=27%  Similarity=0.464  Sum_probs=26.0

Q ss_pred             HHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          149 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       149 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      |+++|+++++|.|.+|++.|.....|.+|+++ +++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCC
T ss_pred             CCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCC
Confidence            55566666666666666666666666666666 566666665

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=4.5e-11  Score=81.27  Aligned_cols=43  Identities=23%  Similarity=0.418  Sum_probs=29.9

Q ss_pred             HHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec-C
Q 014855          148 KHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD-C  190 (417)
Q Consensus       148 ~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~-C  190 (417)
                      +|+++|+++++|.|.+|++.|..+..|.+|+++ +++++|.|. |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            356667777777777777777777777777766 566777776 5

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=5.6e-11  Score=80.87  Aligned_cols=43  Identities=26%  Similarity=0.403  Sum_probs=31.3

Q ss_pred             HHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec-C
Q 014855          148 KHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD-C  190 (417)
Q Consensus       148 ~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~-C  190 (417)
                      +|+++|+++++|+|.+|++.|..+..|.+|+++ +++++|.|+ |
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            366677777777777777777777777777777 677777776 5

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=4.6e-11  Score=81.23  Aligned_cols=43  Identities=26%  Similarity=0.430  Sum_probs=30.0

Q ss_pred             HHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec-C
Q 014855          148 KHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD-C  190 (417)
Q Consensus       148 ~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~-C  190 (417)
                      +|+++|+++++|+|.+|++.|.....|.+|+++ +++++|.|+ |
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            356667777777777777777777777777766 666777776 5

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.04  E-value=4.2e-11  Score=81.48  Aligned_cols=41  Identities=27%  Similarity=0.547  Sum_probs=26.9

Q ss_pred             HHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          149 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       149 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      |+++|+++++|+|.+|++.|.....|.+|+++ +++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em0_A            3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS   44 (46)
T ss_dssp             CCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSS
T ss_pred             CcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCC
Confidence            55666666666666666666666666666666 566666665

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=4.4e-11  Score=81.30  Aligned_cols=43  Identities=28%  Similarity=0.482  Sum_probs=31.5

Q ss_pred             HHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec-C
Q 014855          148 KHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD-C  190 (417)
Q Consensus       148 ~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~-C  190 (417)
                      +|+++|+++++|+|.+|++.|.....|.+|+++ +++++|.|+ |
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            366677777777777777777777777777777 677777776 5

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=4.2e-11  Score=81.49  Aligned_cols=43  Identities=26%  Similarity=0.461  Sum_probs=32.9

Q ss_pred             HHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec-C
Q 014855          148 KHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD-C  190 (417)
Q Consensus       148 ~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~-C  190 (417)
                      +|+++|+++++|.|.+|++.|..+..|.+|+++ +++++|.|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            466777777778887788888777777777777 677777776 6

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=5.8e-11  Score=80.77  Aligned_cols=42  Identities=26%  Similarity=0.456  Sum_probs=30.1

Q ss_pred             HHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          148 KHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       148 ~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      +|+++|+++++|.|.+|++.|.....|.+|+++ +++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS   44 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCS
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCC
Confidence            466677777777777777777777777777777 667777776

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=5.4e-11  Score=80.86  Aligned_cols=43  Identities=28%  Similarity=0.488  Sum_probs=31.1

Q ss_pred             HHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec-C
Q 014855          148 KHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD-C  190 (417)
Q Consensus       148 ~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~-C  190 (417)
                      +|+++|+++++|.|.+|++.|.....|.+|+++ +++++|.|. |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            366677777777777777777777777777777 667777776 5

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=5.1e-11  Score=81.06  Aligned_cols=43  Identities=28%  Similarity=0.459  Sum_probs=29.4

Q ss_pred             HHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec-C
Q 014855          148 KHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD-C  190 (417)
Q Consensus       148 ~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~-C  190 (417)
                      +|+++|+++++|.|.+|++.|..+..|.+|+++ +++++|.|+ |
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            356666777777777777777777777777666 566777766 5

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.03  E-value=4.1e-11  Score=81.47  Aligned_cols=41  Identities=22%  Similarity=0.442  Sum_probs=25.8

Q ss_pred             HHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          149 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       149 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      |+++|+++++|.|.+|++.|.....|.+|+++ +++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2el4_A            3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS   44 (46)
T ss_dssp             CCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCT
T ss_pred             cccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            55566666666666666666666666666666 556666665

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=6e-11  Score=80.70  Aligned_cols=43  Identities=28%  Similarity=0.481  Sum_probs=30.8

Q ss_pred             HHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec-C
Q 014855          148 KHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD-C  190 (417)
Q Consensus       148 ~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~-C  190 (417)
                      .|+++|+++++|.|.+|++.|.....|.+|+++ +++++|.|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            366677777777777777777777777777777 667777776 5

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=6.5e-11  Score=80.53  Aligned_cols=41  Identities=24%  Similarity=0.439  Sum_probs=26.5

Q ss_pred             HHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          149 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       149 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      |+++|+++++|.|.+|++.|.....|++|+++ +++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCC
Confidence            55566666666666666666666666666666 566666665

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=5.8e-11  Score=80.78  Aligned_cols=42  Identities=26%  Similarity=0.486  Sum_probs=28.4

Q ss_pred             HHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          148 KHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       148 ~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      +|+++|+++++|.|.+|++.|.....|.+|+++ +++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS   44 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            356666666677777777777777777777666 566666665

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=8.9e-11  Score=79.98  Aligned_cols=42  Identities=29%  Similarity=0.478  Sum_probs=33.5

Q ss_pred             HHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec-C
Q 014855          149 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD-C  190 (417)
Q Consensus       149 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~-C  190 (417)
                      |+++|+++++|+|.+|++.|.+...|.+|+++ +++++|.|+ |
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            66777888888888888888888888888877 777888887 6

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=5.9e-11  Score=80.67  Aligned_cols=43  Identities=23%  Similarity=0.355  Sum_probs=31.7

Q ss_pred             HHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec-C
Q 014855          148 KHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD-C  190 (417)
Q Consensus       148 ~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~-C  190 (417)
                      +|+++|+++++|.|.+||+.|.....|..|+++ +++++|.|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            366777777777777777777777777777777 677777776 5

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=5e-11  Score=81.04  Aligned_cols=42  Identities=24%  Similarity=0.453  Sum_probs=27.2

Q ss_pred             HHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          148 KHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       148 ~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      +|+++|+++++|+|.+|++.|.....|..|+++ +++++|.|+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS   44 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCS
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            355666666666666666666666666666666 566666665

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=7.7e-11  Score=80.23  Aligned_cols=41  Identities=27%  Similarity=0.455  Sum_probs=25.3

Q ss_pred             HHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          149 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       149 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      |+++|+++++|.|.+|++.|..+..|.+|+++ +++++|.|.
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS   44 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCC
Confidence            45556666666666666666666666666666 556666665

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=5.2e-11  Score=81.04  Aligned_cols=41  Identities=29%  Similarity=0.461  Sum_probs=23.7

Q ss_pred             HHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          149 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       149 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      |+++|+++++|+|.+|++.|.....|..|+++ +++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCS
T ss_pred             CCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            45555555555555555555555555555555 455555555

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=5.5e-11  Score=80.98  Aligned_cols=41  Identities=27%  Similarity=0.481  Sum_probs=22.5

Q ss_pred             HHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          149 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       149 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      |+++|+++++|+|.+|++.|.++..|.+|+++ +++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS   44 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            44555555555555555555555555555555 455555554

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=6.1e-11  Score=80.68  Aligned_cols=41  Identities=29%  Similarity=0.482  Sum_probs=24.9

Q ss_pred             HHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          149 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       149 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      |+++|+++++|+|.+|++.|.....|.+|+++ +++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCC
Confidence            45556666666666666666666666666665 555666665

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=6.9e-11  Score=80.34  Aligned_cols=43  Identities=23%  Similarity=0.461  Sum_probs=28.4

Q ss_pred             HHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec-C
Q 014855          148 KHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD-C  190 (417)
Q Consensus       148 ~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~-C  190 (417)
                      +|+++|+++++|.|.+|++.|.....|.+|+++ +++++|.|. |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            356666666666666666666666666666666 566666665 5

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=7.4e-11  Score=80.30  Aligned_cols=41  Identities=24%  Similarity=0.412  Sum_probs=24.6

Q ss_pred             HHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          149 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       149 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      |+++|+++++|.|.+|++.|.++..|.+|+++ +++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS   44 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCC
Confidence            45556666666666666666666666666655 555666665

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=5.8e-11  Score=80.86  Aligned_cols=42  Identities=19%  Similarity=0.424  Sum_probs=25.7

Q ss_pred             HHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          148 KHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       148 ~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      +|+++|+++++|.|.+|++.|.....|.+|+++ +++++|.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            355566666666666666666666666666665 555666665

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=6.2e-11  Score=80.62  Aligned_cols=43  Identities=28%  Similarity=0.549  Sum_probs=31.2

Q ss_pred             HHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec-C
Q 014855          148 KHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD-C  190 (417)
Q Consensus       148 ~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~-C  190 (417)
                      +|+++|+++++|.|.+|++.|.....|.+|+++ +++++|.|. |
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            466777777777777777777777777777777 667777776 5

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.00  E-value=6.5e-11  Score=80.46  Aligned_cols=41  Identities=24%  Similarity=0.446  Sum_probs=23.7

Q ss_pred             HHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          149 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       149 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      |+++|+++++|.|.+|++.|.....|.+|+++ +++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS   44 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTT
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCC
Confidence            45555555555555555555555555555555 455555555

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=6.8e-11  Score=80.43  Aligned_cols=43  Identities=26%  Similarity=0.430  Sum_probs=30.9

Q ss_pred             HHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec-C
Q 014855          148 KHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD-C  190 (417)
Q Consensus       148 ~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~-C  190 (417)
                      +|+++|+++++|.|.+|++.|.....|..|+++ +++++|.|+ |
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            356677777777777777777777777777777 667777776 5

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.00  E-value=2.8e-10  Score=85.13  Aligned_cols=54  Identities=20%  Similarity=0.483  Sum_probs=35.3

Q ss_pred             CCceeeCCC--CCccCCCCCCcccCHHHHHHHHhhccCCCccccCc--CCccccChhhHHHHHHH
Q 014855          120 RKKVYVCPE--PTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEK--CSKKYAVQSDWKAHSKI  180 (417)
Q Consensus       120 ~~k~~~C~~--C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~--C~k~F~~~~~L~~H~~~  180 (417)
                      ..++|.|..  |       ++.|.....|.+|+++|+++++|+|.+  |++.|.....|.+|+++
T Consensus        14 ~~~~~~C~~~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~   71 (72)
T 2epa_A           14 RIRSHICSHPGC-------GKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRT   71 (72)
T ss_dssp             CCCCEECSSTTT-------CCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTT
T ss_pred             ccCceeCCCCCC-------ccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhc
Confidence            456666666  5       666666666666666666666666643  66666666666666543

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=1e-10  Score=79.50  Aligned_cols=41  Identities=29%  Similarity=0.490  Sum_probs=26.3

Q ss_pred             HHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          149 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       149 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      |+++|+++++|.|.+|++.|.....|.+|+++ +++++|.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS   44 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCC
Confidence            45566666666666666666666666666666 566666665

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=1e-10  Score=79.49  Aligned_cols=42  Identities=17%  Similarity=0.250  Sum_probs=28.2

Q ss_pred             HHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec-C
Q 014855          149 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD-C  190 (417)
Q Consensus       149 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~-C  190 (417)
                      |+++|+++++|.|.+|++.|.....|..|+++ +++++|+|. |
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            55666666666676677666666666666666 566666665 5

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.00  E-value=5.2e-10  Score=83.60  Aligned_cols=57  Identities=19%  Similarity=0.418  Sum_probs=52.2

Q ss_pred             cCCCCceeccc--ccccccChHHHHHHHHhcCCCcccccccccccCCceeeCCC--CCccCCCCCCcccCHHHHHHHHhh
Q 014855           77 LMATNRFLCEI--CNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPE--PTCVHHDPSRALGDLTGIKKHFSR  152 (417)
Q Consensus        77 ~~~~k~~~C~~--Cgk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~--C~C~~~~~~k~f~~~~~L~~H~~~  152 (417)
                      ....++|.|.+  |++.|.....|.+|+++|.             ++++|.|.+  |       ++.|.....|.+|+++
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~-------------~~~~~~C~~~~C-------~k~f~~~~~l~~H~~~   71 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHT-------------GEKPFSCSWKGC-------ERRFARSDELSRHRRT   71 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHHHHS-------------SSCSEECCCTTC-------CCEESSHHHHHHHTTT
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHHhcC-------------CCCCccCCCCCC-------CcccCCHHHHHhHhhc
Confidence            44567899998  9999999999999999998             899999975  8       9999999999999987


Q ss_pred             c
Q 014855          153 K  153 (417)
Q Consensus       153 H  153 (417)
                      |
T Consensus        72 H   72 (72)
T 2epa_A           72 H   72 (72)
T ss_dssp             C
T ss_pred             C
Confidence            6

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=7.3e-11  Score=80.29  Aligned_cols=42  Identities=29%  Similarity=0.506  Sum_probs=28.3

Q ss_pred             HHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          148 KHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       148 ~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      +|+++|+++++|.|.+|++.|..+..|.+|+++ +++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTT
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            356666666677777777777777777777666 566666665

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=7.5e-11  Score=80.22  Aligned_cols=41  Identities=29%  Similarity=0.519  Sum_probs=19.9

Q ss_pred             HHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          149 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       149 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      |+++|+++++|+|.+|++.|..+..|.+|+++ +++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTT
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            34444444455555555555555555555444 444444444

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.99  E-value=9.5e-11  Score=79.77  Aligned_cols=41  Identities=17%  Similarity=0.333  Sum_probs=23.2

Q ss_pred             HHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          149 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       149 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      |+++|+++++|.|.+|++.|..+..|..|+++ +++++|.|.
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS   44 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            44555555555555555555555555555555 455555554

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.99  E-value=2.3e-11  Score=88.85  Aligned_cols=53  Identities=17%  Similarity=0.357  Sum_probs=38.0

Q ss_pred             HHHHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec-CCCccCCchHHH
Q 014855          146 IKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD-CGKLFSRRDSFI  201 (417)
Q Consensus       146 L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~-C~k~F~~~~~L~  201 (417)
                      |..|+++|+++++|.|.+||+.|.....|.   ++ .++++|.|. ||+.|....++.
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~   56 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAM   56 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCS
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCcccc
Confidence            345777777778888888888887777665   45 677778887 888777665543

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.3e-10  Score=79.02  Aligned_cols=42  Identities=29%  Similarity=0.457  Sum_probs=28.0

Q ss_pred             HHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec-C
Q 014855          149 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD-C  190 (417)
Q Consensus       149 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~-C  190 (417)
                      |+++|+++++|.|.+|++.|.....|.+|+++ +++++|.|+ |
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            45566666666666666666666666666666 566666665 5

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.98  E-value=4.1e-10  Score=79.56  Aligned_cols=46  Identities=15%  Similarity=0.280  Sum_probs=36.4

Q ss_pred             ccCCceeeCCCCCccCCCCCCcccCHHHHHHHHh-hccCCCccccCcCCccccC
Q 014855          118 VERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFS-RKHGEKKWKCEKCSKKYAV  170 (417)
Q Consensus       118 ~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~-~H~~ekp~~C~~C~k~F~~  170 (417)
                      +.++++|.|.+|       ++.|.....|.+|++ +|+++++|+|.+|++.|..
T Consensus         7 ~~~~k~~~C~~C-------~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            7 GSVGKPYICQSC-------GKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCSSCCEECSSS-------CCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCeECCCC-------CcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            346788888887       888888888888876 7888888888888888864

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.2e-10  Score=79.36  Aligned_cols=42  Identities=19%  Similarity=0.343  Sum_probs=28.5

Q ss_pred             HHhhccCCCccccCcCCccccChhhHHHHHH-H-hCCCceeec-C
Q 014855          149 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSK-I-CGTREYKCD-C  190 (417)
Q Consensus       149 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~-~-~~ekp~~C~-C  190 (417)
                      |+++|+++++|.|.+|++.|.....|.+|++ + .++++|.|. |
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            5566666677777777777777777777766 5 566667666 5

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=8.4e-11  Score=79.97  Aligned_cols=41  Identities=37%  Similarity=0.579  Sum_probs=25.4

Q ss_pred             HHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          149 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       149 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      |+++|+++++|+|.+|++.|.....|.+|+++ +++++|.|.
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS   44 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCS
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCC
Confidence            45566666666666666666666666666666 556666665

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=5.2e-11  Score=81.02  Aligned_cols=41  Identities=27%  Similarity=0.510  Sum_probs=22.3

Q ss_pred             HHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          149 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       149 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      |+++|+++++|.|.+|++.|..+..|..|+++ +++++|.|.
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytg_A            3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            44555555555555555555555555555555 455555554

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.5e-10  Score=77.62  Aligned_cols=38  Identities=21%  Similarity=0.224  Sum_probs=37.1

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKC  164 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C  164 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|++|
T Consensus         9 ~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            9 GGKHFECTEC-------GKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCEECSSS-------CCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             CCCCeECCCC-------CchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.9e-10  Score=78.22  Aligned_cols=38  Identities=18%  Similarity=0.217  Sum_probs=37.1

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKC  164 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C  164 (417)
                      ++++|.|++|       ++.|.....|.+|+++|+++++|+|.+|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            9 GEKPYECSVC-------GKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             SCCSEECSSS-------CCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CCCCeeCCCc-------CCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.96  E-value=1.9e-10  Score=78.16  Aligned_cols=38  Identities=21%  Similarity=0.272  Sum_probs=37.1

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKC  164 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C  164 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|.+|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            9 GEKRYKCNEC-------GKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             TSCCEECSSS-------CCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCcCcCCCCC-------cchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.6e-10  Score=77.44  Aligned_cols=38  Identities=24%  Similarity=0.288  Sum_probs=37.1

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKC  164 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C  164 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|.+|
T Consensus         9 ~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            9 GKKPYKCNEC-------GKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCBCTTT-------CCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCcCeECCCC-------CCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.96  E-value=1.8e-10  Score=78.33  Aligned_cols=38  Identities=26%  Similarity=0.307  Sum_probs=37.1

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKC  164 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C  164 (417)
                      ++++|.|++|       ++.|.....|.+|+++|+++++|+|.+|
T Consensus         9 ~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            9 GEKPYECKEC-------GKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCSCBCSSS-------CCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCceECCCC-------CchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.9e-10  Score=78.25  Aligned_cols=41  Identities=27%  Similarity=0.481  Sum_probs=27.9

Q ss_pred             HHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          149 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       149 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      |+++|+++++|.|.+|++.|.....|.+|+++ +++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSS
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            55666666777777777777777777777666 566666665

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.95  E-value=1.9e-10  Score=78.20  Aligned_cols=38  Identities=18%  Similarity=0.248  Sum_probs=37.1

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKC  164 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C  164 (417)
                      ++++|.|++|       ++.|.....|.+|+++|+++++|+|.+|
T Consensus         9 ~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            9 GEKTWKCREC-------DMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSS-------CCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCcCeECCCC-------CcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            8999999999       9999999999999999999999999988

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.4e-10  Score=75.93  Aligned_cols=41  Identities=20%  Similarity=0.374  Sum_probs=33.2

Q ss_pred             HHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          149 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       149 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      |+++|+++++|+|.+|++.|.....|.+|+++ +++++|.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            56778888888888888888888888888888 678888874

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.95  E-value=1.9e-10  Score=78.14  Aligned_cols=38  Identities=16%  Similarity=0.136  Sum_probs=37.1

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKC  164 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C  164 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|.+|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            9 GVKPYGCSQC-------AKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSS-------SCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             CCCceECCCC-------CchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.6e-10  Score=77.46  Aligned_cols=38  Identities=21%  Similarity=0.249  Sum_probs=37.1

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKC  164 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C  164 (417)
                      ++++|.|++|       ++.|.....|.+|+++|+++++|+|.+|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            9 GEKPYKCNEC-------GKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSEECSSS-------CCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CCCCeECCCC-------CchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999998

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.3e-10  Score=77.77  Aligned_cols=38  Identities=21%  Similarity=0.233  Sum_probs=37.0

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKC  164 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C  164 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|.|++|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            9 GEKPYICAEC-------GKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             SCCSEECSSS-------CCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CCcCeECCCC-------ChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999987

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=1.7e-10  Score=78.53  Aligned_cols=42  Identities=29%  Similarity=0.479  Sum_probs=33.5

Q ss_pred             HHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          148 KHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       148 ~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      +|+++|+++++|+|.+|++.|.....|.+|+++ +++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            467778888888888888888888888888887 677888775

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.8e-10  Score=77.35  Aligned_cols=38  Identities=24%  Similarity=0.336  Sum_probs=37.1

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKC  164 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C  164 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|.+|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            9 GEKPFDCIDC-------GKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSBCCTTT-------CCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCeECCCC-------CceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.95  E-value=1.9e-10  Score=76.46  Aligned_cols=41  Identities=20%  Similarity=0.454  Sum_probs=30.1

Q ss_pred             HHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          149 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       149 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      |+++|+++++|.|.+|++.|.+...|.+|+++ +++++|.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            45677777777777777777777777777777 677777763

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=2.2e-10  Score=77.80  Aligned_cols=38  Identities=16%  Similarity=0.085  Sum_probs=37.1

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKC  164 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C  164 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|.+|
T Consensus         9 ~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            9 GEKPHECREC-------GKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCSCBCTTT-------CCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCCCeeCCCC-------CchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=2.9e-10  Score=77.22  Aligned_cols=38  Identities=21%  Similarity=0.243  Sum_probs=37.1

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKC  164 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C  164 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|.+|
T Consensus         9 ~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            9 GEKPYKCHEC-------GKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCEECTTT-------CCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCCeECCCC-------CchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=3.2e-10  Score=77.05  Aligned_cols=38  Identities=21%  Similarity=0.195  Sum_probs=37.1

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKC  164 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C  164 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|.+|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            9 GEKPYKCEEC-------GKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSS-------CCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCcCccCCCc-------cchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.9e-10  Score=78.17  Aligned_cols=38  Identities=24%  Similarity=0.291  Sum_probs=37.1

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKC  164 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C  164 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|.+|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            9 GVKPYMCNEC-------GKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSS-------CCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CCcCeECCCC-------CchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=2.7e-10  Score=76.58  Aligned_cols=38  Identities=16%  Similarity=0.100  Sum_probs=37.1

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKC  164 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C  164 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|.+|
T Consensus         7 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            7 GEKPFGCSCC-------EKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             SCCCEECSSS-------SCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCcCccCCCC-------CcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=2.9e-10  Score=77.16  Aligned_cols=38  Identities=16%  Similarity=0.133  Sum_probs=37.1

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKC  164 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C  164 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|.+|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            9 GERPHKCNEC-------GKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSS-------CCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCCCeeCCCC-------ChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.9e-10  Score=78.11  Aligned_cols=38  Identities=24%  Similarity=0.337  Sum_probs=37.1

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKC  164 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C  164 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|++|
T Consensus         9 ~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            9 GERPYICTVC-------GKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECTTT-------CCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCcCCCCC-------CchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=3.3e-10  Score=76.93  Aligned_cols=38  Identities=18%  Similarity=0.216  Sum_probs=37.1

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKC  164 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C  164 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|++|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            9 GEKPYECSIC-------GKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSS-------CCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCcCcCCCCC-------CcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=2.4e-10  Score=77.58  Aligned_cols=38  Identities=16%  Similarity=0.237  Sum_probs=37.0

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKC  164 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C  164 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|.+|
T Consensus         9 ~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            9 GEKPYKCSDC-------GKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             SCCSCBCSSS-------CCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCccCCcc-------ChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=3.3e-10  Score=77.02  Aligned_cols=38  Identities=24%  Similarity=0.283  Sum_probs=37.1

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKC  164 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C  164 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|.+|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            9 GEKPYGCSEC-------GKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCBCSSS-------CCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCCCcCCCcc-------ChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=3.3e-10  Score=77.00  Aligned_cols=38  Identities=18%  Similarity=0.218  Sum_probs=37.1

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKC  164 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C  164 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|.+|
T Consensus         9 ~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            9 VEKPYKCEDC-------GKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSSCBCSSS-------CCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCeeCccc-------CchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=3.1e-10  Score=77.12  Aligned_cols=38  Identities=21%  Similarity=0.313  Sum_probs=37.1

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKC  164 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C  164 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|++|
T Consensus         9 ~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            9 GEKPYKCNEC-------GKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCSEECSSS-------CCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCCCEeCCcC-------CCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999998

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=2.4e-10  Score=77.58  Aligned_cols=38  Identities=18%  Similarity=0.191  Sum_probs=37.0

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKC  164 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C  164 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|..|
T Consensus         9 ~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            9 GEKSHTCDEC-------GKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCSSEECTTT-------CCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CCCCeECCCc-------CcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.93  E-value=3.5e-10  Score=76.73  Aligned_cols=38  Identities=24%  Similarity=0.230  Sum_probs=37.1

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKC  164 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C  164 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|.+|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            9 GEKPYNCKEC-------GKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSS-------CCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCcCeECCcc-------ccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=2.8e-10  Score=77.21  Aligned_cols=38  Identities=24%  Similarity=0.291  Sum_probs=37.1

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKC  164 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C  164 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|.+|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            9 GEKLYNCKEC-------GKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCBTTT-------TBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCCCeECCCC-------CCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=4.3e-10  Score=76.30  Aligned_cols=38  Identities=26%  Similarity=0.301  Sum_probs=37.1

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKC  164 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C  164 (417)
                      ++++|.|++|       ++.|.....|.+|+++|+++++|+|.+|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            9 GEKPYVCDYC-------GKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSS-------CCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCeECCCC-------ChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.93  E-value=2.9e-10  Score=77.33  Aligned_cols=38  Identities=18%  Similarity=0.267  Sum_probs=37.1

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKC  164 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C  164 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|.+|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            9 GEKPFKCVEC-------GKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSBCCSSS-------CCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCcccCcc-------CcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=3.6e-10  Score=76.79  Aligned_cols=38  Identities=13%  Similarity=0.147  Sum_probs=37.1

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKC  164 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C  164 (417)
                      ++++|.|++|       ++.|.....|.+|+++|+++++|+|.+|
T Consensus         9 ~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            9 GEKPFKCDIC-------GKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             SSCSCCCSSS-------CCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCcCCCcC-------CchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=3.4e-10  Score=76.87  Aligned_cols=38  Identities=21%  Similarity=0.228  Sum_probs=37.1

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKC  164 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C  164 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|.+|
T Consensus         9 ~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            9 GENPYECHEC-------GKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             SSCCEECSSS-------CCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCcCcCCCCC-------CcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=3.6e-10  Score=76.82  Aligned_cols=38  Identities=21%  Similarity=0.174  Sum_probs=37.1

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKC  164 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C  164 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|.+|
T Consensus         9 ~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            9 STKSHQCHEC-------GRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSEECSSS-------CCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCCCeECCcC-------CCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999998

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=3.6e-10  Score=76.76  Aligned_cols=38  Identities=21%  Similarity=0.240  Sum_probs=37.1

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKC  164 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C  164 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|.+|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            9 GEKPYKCSEC-------GKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSS-------CCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CCcCeECCCC-------CCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=2.7e-10  Score=76.51  Aligned_cols=42  Identities=24%  Similarity=0.483  Sum_probs=34.3

Q ss_pred             HHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          148 KHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       148 ~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      +|+++|+++++|.|.+|++.|.....|..|+++ +++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            467788888888888888888888888888888 778888874

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=2.9e-10  Score=77.14  Aligned_cols=38  Identities=18%  Similarity=0.206  Sum_probs=37.1

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKC  164 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C  164 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|.+|
T Consensus         9 ~~~~~~C~~C-------~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            9 GEKPYKCNEC-------GKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCSSEETTT-------TEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCeECCCc-------ChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=3.6e-10  Score=76.68  Aligned_cols=38  Identities=24%  Similarity=0.322  Sum_probs=37.1

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKC  164 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C  164 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|.|.+|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            9 GEKPYKCNEC-------GKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCTTCCTTT-------CCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCcCcCCCCC-------CCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.92  E-value=2.5e-10  Score=77.61  Aligned_cols=42  Identities=26%  Similarity=0.544  Sum_probs=31.9

Q ss_pred             HHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          148 KHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       148 ~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      .|+++|+++++|.|.+|++.|.....|.+|+++ +++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            366777777778888888888887888888777 677777774

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=2.5e-10  Score=77.55  Aligned_cols=42  Identities=29%  Similarity=0.463  Sum_probs=31.7

Q ss_pred             HHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          148 KHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       148 ~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      +|+++|+++++|+|.+|++.|.....|.+|+++ +++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence            366777777777777777777777777777777 677777774

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=2.4e-10  Score=77.55  Aligned_cols=42  Identities=26%  Similarity=0.469  Sum_probs=30.9

Q ss_pred             HHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          148 KHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       148 ~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      +|+++|+++++|.|.+|++.|.....|.+|+++ +++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            366777777777777777777777777777777 677777774

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=2.2e-10  Score=77.91  Aligned_cols=42  Identities=19%  Similarity=0.365  Sum_probs=34.8

Q ss_pred             HHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          148 KHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       148 ~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      +|+++|+++++|.|.+|++.|.....|.+|+++ +++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            477788888888888888888888888888888 778888875

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=3.2e-10  Score=77.08  Aligned_cols=41  Identities=20%  Similarity=0.420  Sum_probs=31.5

Q ss_pred             HHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          149 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       149 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      |+++|+++++|+|.+|++.|.....|.+|+++ +++++|+|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            66777777777787788777777777777777 677777774

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=2.3e-10  Score=76.82  Aligned_cols=42  Identities=21%  Similarity=0.365  Sum_probs=33.2

Q ss_pred             HHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          148 KHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       148 ~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      +|+++|+++++|.|.+|++.|.....|..|+++ +++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            467778888888888888888888888888877 677888774

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.91  E-value=2e-10  Score=81.14  Aligned_cols=51  Identities=16%  Similarity=0.201  Sum_probs=47.4

Q ss_pred             CCcccCHHHHHHHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCcee
Q 014855          137 SRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYK  187 (417)
Q Consensus       137 ~k~f~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~  187 (417)
                      ++.|.....|..|+++|+++++|.|.+||+.|.....|..|+++ ++++||.
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            67888889999999999999999999999999999999999999 8888874

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=4.4e-10  Score=76.31  Aligned_cols=38  Identities=18%  Similarity=0.173  Sum_probs=37.1

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKC  164 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C  164 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|.+|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            9 GEKPFKCEEC-------GKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSS-------CCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCcCCCCC-------CCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=2.8e-10  Score=76.51  Aligned_cols=42  Identities=19%  Similarity=0.360  Sum_probs=35.2

Q ss_pred             HHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          148 KHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       148 ~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      +|+++|+++++|+|.+|++.|.....|..|+++ +++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            477888888888888888888888888888888 778888873

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=2.7e-10  Score=77.30  Aligned_cols=42  Identities=26%  Similarity=0.486  Sum_probs=31.8

Q ss_pred             HHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          148 KHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       148 ~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      +|+++|+++++|.|.+|++.|..+..|..|+++ +++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            466777777777777777777777777777777 677777774

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=3.2e-10  Score=76.99  Aligned_cols=38  Identities=26%  Similarity=0.309  Sum_probs=36.7

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKC  164 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C  164 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|.+|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            9 GEKPYRCAEC-------GKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSS-------CCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCeECCCC-------CchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999876

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=2.5e-10  Score=77.55  Aligned_cols=42  Identities=21%  Similarity=0.460  Sum_probs=30.2

Q ss_pred             HHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          148 KHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       148 ~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      +|+++|+++++|.|.+|++.|.....|.+|+++ +++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            366677777777777777777777777777777 667777764

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=3e-10  Score=77.13  Aligned_cols=42  Identities=26%  Similarity=0.463  Sum_probs=32.1

Q ss_pred             HHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          148 KHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       148 ~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      +|+++|+++++|.|.+|++.|.....|.+|+++ +++++|.|+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            467777777778888888888888888888777 677777774

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=4.9e-10  Score=76.09  Aligned_cols=38  Identities=18%  Similarity=0.161  Sum_probs=37.0

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKC  164 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C  164 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|.+|
T Consensus         9 ~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            9 REKSHQCREC-------GEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CCCCEECTTT-------CCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             CCCCEEcccc-------ChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.91  E-value=5.2e-10  Score=76.00  Aligned_cols=38  Identities=13%  Similarity=0.106  Sum_probs=37.1

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKC  164 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C  164 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|.+|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            9 GVNPYKCSQC-------EKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSS-------SCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCeECCCC-------CcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=2.4e-10  Score=77.70  Aligned_cols=42  Identities=26%  Similarity=0.500  Sum_probs=30.2

Q ss_pred             HHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          148 KHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       148 ~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      +|+++|+++++|+|.+|++.|..+..|..|+++ +++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            366677777777777777777777777777777 667777774

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=3.8e-10  Score=76.69  Aligned_cols=38  Identities=21%  Similarity=0.334  Sum_probs=37.1

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKC  164 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C  164 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|.+|
T Consensus         9 ~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            9 GERPYGCNEC-------GKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCEECSSS-------CCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCEEcccc-------CcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=3.4e-10  Score=76.86  Aligned_cols=38  Identities=18%  Similarity=0.237  Sum_probs=37.1

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKC  164 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C  164 (417)
                      ++++|.|++|       ++.|.....|.+|+++|+++++|+|.+|
T Consensus         9 ~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            9 GEKPFKCGEC-------GKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCSEECTTT-------CCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCeECCCC-------CcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999998

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=4e-10  Score=76.58  Aligned_cols=42  Identities=26%  Similarity=0.486  Sum_probs=32.5

Q ss_pred             HHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          148 KHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       148 ~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      +|+++|+++++|.|.+|++.|.....|..|+++ +++++|.|+
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            366777788888888888888888888888777 677787774

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=4.8e-10  Score=76.14  Aligned_cols=38  Identities=18%  Similarity=0.238  Sum_probs=37.1

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKC  164 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C  164 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|.+|
T Consensus         9 ~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            9 GEKPFKCEEC-------GKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEEETTT-------TEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CCCCeeCCCC-------CcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=4.3e-10  Score=76.30  Aligned_cols=38  Identities=16%  Similarity=0.077  Sum_probs=37.1

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKC  164 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C  164 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|.+|
T Consensus         9 ~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            9 GEKPCKCTEC-------GKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCSEECSSS-------CCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             CCCCeeCCCC-------CCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=3.2e-10  Score=77.05  Aligned_cols=38  Identities=18%  Similarity=0.231  Sum_probs=37.1

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKC  164 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C  164 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|.+|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            9 GEKPYKCNEC-------GKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCSSEECSSS-------CCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CCCCeECCcC-------CchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=3.5e-10  Score=76.83  Aligned_cols=38  Identities=16%  Similarity=0.214  Sum_probs=37.1

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKC  164 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C  164 (417)
                      ++++|.|++|       ++.|.....|.+|+++|+++++|+|.+|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            9 GEKPYKCEKC-------GKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             SCCSEEETTT-------TEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCCeECCCC-------CCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=3e-10  Score=77.20  Aligned_cols=42  Identities=26%  Similarity=0.560  Sum_probs=30.7

Q ss_pred             HHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          148 KHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       148 ~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      +|+++|+++++|.|.+|++.|.....|.+|+++ +++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            466777777777777777777777777777777 667777774

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=4.2e-10  Score=76.51  Aligned_cols=41  Identities=22%  Similarity=0.475  Sum_probs=31.8

Q ss_pred             HHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          149 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       149 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      |+++|+++++|+|.+|++.|.....|.+|+++ +++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            66777778888888888888888888888777 677777774

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=2.7e-10  Score=76.51  Aligned_cols=42  Identities=21%  Similarity=0.411  Sum_probs=34.6

Q ss_pred             HHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          148 KHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       148 ~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      .|+++|+++++|.|.+|++.|.....|.+|+++ +++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            367788888888888888888888888888888 778888874

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=2.8e-10  Score=77.35  Aligned_cols=42  Identities=29%  Similarity=0.517  Sum_probs=30.4

Q ss_pred             HHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          148 KHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       148 ~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      +|+++|+++++|.|.+|++.|.....|.+|+++ +++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            366677777777777777777777777777777 667777764

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=3e-10  Score=77.21  Aligned_cols=42  Identities=26%  Similarity=0.513  Sum_probs=30.6

Q ss_pred             HHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          148 KHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       148 ~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      +|+++|+++++|+|.+|++.|.....|.+|+++ +++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            366677777777777777777777777777777 667777764

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=3e-10  Score=77.12  Aligned_cols=42  Identities=24%  Similarity=0.471  Sum_probs=29.0

Q ss_pred             HHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          148 KHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       148 ~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      +|+++|+++++|.|.+|++.|.....|..|+++ +++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            356667777777777777777777777777766 566777664

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=2.8e-10  Score=77.31  Aligned_cols=42  Identities=29%  Similarity=0.473  Sum_probs=31.1

Q ss_pred             HHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          148 KHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       148 ~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      +|+++|+++++|.|.+|++.|.....|.+|+++ +++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            366777777777777777777777777777777 677777774

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=2e-10  Score=76.26  Aligned_cols=40  Identities=20%  Similarity=0.522  Sum_probs=31.1

Q ss_pred             HHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceee
Q 014855          149 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKC  188 (417)
Q Consensus       149 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C  188 (417)
                      |+++|+++++|.|.+|++.|.....|..|+++ +++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            66777777888888888888888888888777 67777776

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=4.7e-10  Score=76.26  Aligned_cols=38  Identities=21%  Similarity=0.180  Sum_probs=37.1

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKC  164 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C  164 (417)
                      ++++|.|++|       ++.|.....|.+|+++|+++++|+|.+|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            9 GEKPYKCVEC-------GKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             SCCSEECSSS-------CCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCeECccc-------CchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.89  E-value=1.3e-10  Score=84.88  Aligned_cols=55  Identities=15%  Similarity=0.302  Sum_probs=47.6

Q ss_pred             HHHHHHhcCCCcccccccccccCCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcCCccccChhhHH
Q 014855           98 LQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWK  175 (417)
Q Consensus        98 L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~  175 (417)
                      |..|+++|.             ++++|.|++|       ++.|.....|.   ++|+++++|+|.+||+.|.....+.
T Consensus         2 L~~h~~~H~-------------~~k~~~C~~C-------~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~   56 (62)
T 1vd4_A            2 IETDERDST-------------NRASFKCPVC-------SSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAM   56 (62)
T ss_dssp             CCCCSSSCC-------------SSSEEECSSS-------CCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCS
T ss_pred             hhhHHHHcC-------------CCCCccCCCC-------CchhccHHHhH---hhcCCCCCEECCCCCCccccCcccc
Confidence            345666776             8999999999       99999988887   8999999999999999998877654

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=3.6e-10  Score=76.73  Aligned_cols=41  Identities=24%  Similarity=0.494  Sum_probs=28.7

Q ss_pred             HHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          149 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       149 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      |+++|+++++|.|.+|++.|.....|.+|+++ +++++|.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            56667777777777777777777777777766 566777664

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=3.7e-10  Score=76.80  Aligned_cols=38  Identities=24%  Similarity=0.335  Sum_probs=37.1

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKC  164 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C  164 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|.+|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            9 GEKPYKCMEC-------GKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCSSSBTTT-------TBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCCCcCCCCC-------CchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.89  E-value=4.6e-10  Score=74.52  Aligned_cols=40  Identities=15%  Similarity=0.360  Sum_probs=31.6

Q ss_pred             HHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceee
Q 014855          149 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKC  188 (417)
Q Consensus       149 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C  188 (417)
                      |+++|+++++|.|.+|++.|..+..|..|+++ +++++|.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            56677788888888888888888888888877 67788776

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=4.5e-10  Score=76.20  Aligned_cols=42  Identities=29%  Similarity=0.529  Sum_probs=32.9

Q ss_pred             HHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          148 KHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       148 ~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      .|+++|+++++|.|.+|++.|.....|.+|+++ +++++|.|+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            367778888888888888888888888888877 677888775

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=3.4e-10  Score=75.23  Aligned_cols=40  Identities=28%  Similarity=0.523  Sum_probs=32.2

Q ss_pred             HHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceee
Q 014855          149 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKC  188 (417)
Q Consensus       149 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C  188 (417)
                      |+++|+++++|.|.+|++.|.....|..|+++ +++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            56778888888888888888888888888877 77888876

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=3.9e-10  Score=76.60  Aligned_cols=41  Identities=27%  Similarity=0.462  Sum_probs=27.9

Q ss_pred             HHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          149 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       149 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      |+++|+++++|.|.+|++.|..+..|.+|+++ +++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            56666666777777777777777777777666 566666664

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=2.9e-10  Score=77.19  Aligned_cols=41  Identities=27%  Similarity=0.491  Sum_probs=27.2

Q ss_pred             HHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          149 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       149 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      |+++|+++++|.|.+|++.|.....|.+|+++ ++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~   44 (46)
T 2yts_A            3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred             CCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCC
Confidence            55666666666666666666666666666666 566666664

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=4.4e-10  Score=76.33  Aligned_cols=38  Identities=21%  Similarity=0.252  Sum_probs=37.1

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKC  164 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C  164 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|.+|
T Consensus         9 ~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            9 GEKPYGCNEC-------GKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCEEETTT-------TEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCcCeECCCC-------CcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=3.8e-10  Score=76.72  Aligned_cols=42  Identities=21%  Similarity=0.437  Sum_probs=35.7

Q ss_pred             HHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          148 KHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       148 ~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      +|+++|+++++|+|.+|++.|.....|..|+++ +++++|.|+
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            477888888888888888888888888888888 788888885

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=3.1e-10  Score=77.04  Aligned_cols=42  Identities=26%  Similarity=0.532  Sum_probs=29.2

Q ss_pred             HHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          148 KHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       148 ~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      +|+++|+++++|.|.+|++.|.....|.+|+++ +++++|.|+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            356667777777777777777777777777766 566777664

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.87  E-value=1.9e-09  Score=76.07  Aligned_cols=48  Identities=23%  Similarity=0.416  Sum_probs=43.6

Q ss_pred             cccCCCCceecccccccccChHHHHHHHH-hcCCCcccccccccccCCceeeCCCCCccCCCCCCcccC
Q 014855           75 KSLMATNRFLCEICNKGFQRDQNLQLHRR-GHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGD  142 (417)
Q Consensus        75 ~~~~~~k~~~C~~Cgk~F~~~~~L~~H~~-~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~f~~  142 (417)
                      ..+.++++|.|++|++.|.....|.+|++ +|.             ++++|.|.+|       ++.|..
T Consensus         5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~-------------~~k~~~C~~C-------~k~F~~   53 (54)
T 2eps_A            5 SSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHT-------------SERPHKCQVW-------VSGPSS   53 (54)
T ss_dssp             CCCCSSCCEECSSSCCEESSHHHHHHHHHHTSC-------------CCCCCCSSSS-------CCSSCC
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHHHhcC-------------CCCCccCCCC-------CCCCCC
Confidence            45678899999999999999999999997 898             8999999999       998865

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=7.5e-10  Score=75.20  Aligned_cols=38  Identities=21%  Similarity=0.270  Sum_probs=36.7

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKC  164 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C  164 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|++|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            9 GEKPFKCKEC-------GKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSS-------CCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCEECCcC-------CchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999876

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=3.7e-10  Score=76.65  Aligned_cols=42  Identities=29%  Similarity=0.544  Sum_probs=33.9

Q ss_pred             HHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          148 KHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       148 ~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      +|+++|+++++|.|.+|++.|.....|.+|+++ +++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            467788888888888888888888888888888 677888875

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=3.7e-10  Score=76.70  Aligned_cols=42  Identities=19%  Similarity=0.282  Sum_probs=36.3

Q ss_pred             HHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          148 KHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       148 ~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      +|+++|+++++|.|.+|++.|.....|..|+++ +++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            477888889999999999999999999999888 788888885

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=7.9e-10  Score=75.24  Aligned_cols=38  Identities=29%  Similarity=0.331  Sum_probs=37.0

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHh-hccCCCccccCcC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFS-RKHGEKKWKCEKC  164 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~-~H~~ekp~~C~~C  164 (417)
                      ++++|.|.+|       ++.|.....|.+|++ +|+++++|+|.+|
T Consensus         9 ~~k~~~C~~C-------~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            9 GKKPYECIEC-------GKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCSBCCSSS-------CCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             CCCCEECCcc-------CchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            8999999999       999999999999999 9999999999988

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.86  E-value=3.8e-10  Score=75.07  Aligned_cols=40  Identities=25%  Similarity=0.480  Sum_probs=27.4

Q ss_pred             HHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceee
Q 014855          149 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKC  188 (417)
Q Consensus       149 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C  188 (417)
                      |+++|+++++|.|.+|++.|.....|..|+++ +++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            45666677777777777777777777777666 56666665

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=4.2e-10  Score=76.52  Aligned_cols=41  Identities=32%  Similarity=0.519  Sum_probs=25.4

Q ss_pred             HHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          149 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       149 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      |+++|+++++|+|.+|++.|.+...|.+|+++ +++++|.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            45556666666666666666666666666666 556666654

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=7.2e-10  Score=75.28  Aligned_cols=39  Identities=21%  Similarity=0.368  Sum_probs=22.9

Q ss_pred             hhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          151 SRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       151 ~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      ++|+++++|.|.+|++.|.....|..|+++ +++++|.|.
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytt_A            5 SSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS   44 (46)
T ss_dssp             SSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCC
T ss_pred             CCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            445555666666666666666666666555 555566555

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=1.8e-09  Score=73.17  Aligned_cols=44  Identities=25%  Similarity=0.418  Sum_probs=40.4

Q ss_pred             CccccCCCCceecccccccccChHHHHHHHHhcCCCcccccccccccCCceeeCCCC
Q 014855           73 SPKSLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEP  129 (417)
Q Consensus        73 ~~~~~~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~C  129 (417)
                      +.+.|.++++|+|++|++.|..+..|.+|+++|.             ++++|.|.+|
T Consensus         3 ~~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~-------------~~k~~~C~~C   46 (46)
T 2ep0_A            3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHT-------------GEKPSGPSSG   46 (46)
T ss_dssp             CCCSSTTCCSEECSSSCCEESSHHHHHHHHTTTS-------------SSCCCSCCCC
T ss_pred             CCCCCCCCCCeeCcccCcccCChHHHHHHHHHhC-------------CCCCCCCCCC
Confidence            3467888999999999999999999999999998             8899999987

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.86  E-value=1.1e-09  Score=74.05  Aligned_cols=41  Identities=15%  Similarity=0.187  Sum_probs=21.8

Q ss_pred             ccCCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcCC
Q 014855          118 VERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCS  165 (417)
Q Consensus       118 ~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C~  165 (417)
                      ++++++|.|.+|       ++.|.....|.+|+++|+++++|.|++||
T Consensus         5 h~~~k~~~C~~C-------~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            5 SSGEKPYSCPVC-------GLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CSSCCSSEETTT-------TEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             cCCCCCCcCCCC-------CcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            344555555555       55555555555555555555555555553

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=5.9e-10  Score=75.75  Aligned_cols=41  Identities=22%  Similarity=0.499  Sum_probs=28.2

Q ss_pred             HHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          149 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       149 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      |+++|+++++|.|.+|++.|..+..|.+|+++ +++++|.|+
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            45666777777777777777777777777766 566777664

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=8.8e-10  Score=74.09  Aligned_cols=41  Identities=17%  Similarity=0.260  Sum_probs=31.5

Q ss_pred             HHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          149 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       149 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      |+++|+++++|.|.+|++.|.....|..|+++ +++++|.|+
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            56677777888888888888888888888777 677777773

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=4.1e-10  Score=75.71  Aligned_cols=41  Identities=20%  Similarity=0.408  Sum_probs=27.0

Q ss_pred             HHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceee
Q 014855          148 KHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKC  188 (417)
Q Consensus       148 ~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C  188 (417)
                      +|+++|+++++|.|.+|++.|.....|..|+++ .++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            356666666666666666666666666666666 56666666

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.85  E-value=1.6e-09  Score=74.43  Aligned_cols=42  Identities=19%  Similarity=0.287  Sum_probs=36.0

Q ss_pred             ccCCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcCCc
Q 014855          118 VERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSK  166 (417)
Q Consensus       118 ~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C~k  166 (417)
                      +.++++|.|.+|       ++.|.....|.+|+++|+++++|+|.+|+|
T Consensus         7 ~~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            7 GRTRKQVACEIC-------GKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCSEEETTT-------TEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCcCeeCCCC-------CcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            347788999888       888999999999999999889999998886

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=4.1e-10  Score=75.68  Aligned_cols=42  Identities=19%  Similarity=0.307  Sum_probs=35.7

Q ss_pred             HHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          148 KHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       148 ~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      +|+++|+++++|.|.+|++.|.....|..|+++ +++++|.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            477888888889999999999998899999888 788888873

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=8.3e-10  Score=74.28  Aligned_cols=41  Identities=24%  Similarity=0.424  Sum_probs=32.3

Q ss_pred             HHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceee
Q 014855          148 KHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKC  188 (417)
Q Consensus       148 ~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C  188 (417)
                      .|+++|+++++|.|.+|++.|.....|..|+++ +++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            467778888888888888888888888888877 67777776

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=7.6e-10  Score=75.17  Aligned_cols=40  Identities=25%  Similarity=0.415  Sum_probs=25.1

Q ss_pred             HHhhccCCCccccCcCCccccChhhHHHHHHH-hC-CCceee
Q 014855          149 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CG-TREYKC  188 (417)
Q Consensus       149 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~-ekp~~C  188 (417)
                      |+++|+++++|.|.+|++.|.....|..|+++ ++ +++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C   44 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPS   44 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSS
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCC
Confidence            55566666666666666666666666666666 45 566665

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.81  E-value=3.7e-09  Score=72.50  Aligned_cols=42  Identities=29%  Similarity=0.441  Sum_probs=39.0

Q ss_pred             cccCCCCceecccccccccChHHHHHHHHhcCCCcccccccccccCCceeeCCCC
Q 014855           75 KSLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEP  129 (417)
Q Consensus        75 ~~~~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~C  129 (417)
                      ..+..+++|.|.+|++.|.....|.+|+++|.             ++++|.|.+|
T Consensus         5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-------------~~k~~~C~~C   46 (48)
T 2epr_A            5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSHS-------------GEKPYSSGPS   46 (48)
T ss_dssp             SCCCCCCSEEETTTTEEESSHHHHHHHGGGSC-------------SCCCCCSCCC
T ss_pred             CCCCCCcCeeCCCCCcccCCHHHHHHHHHhcC-------------CCCCccCCCC
Confidence            35677889999999999999999999999999             8999999999

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=2e-09  Score=73.09  Aligned_cols=37  Identities=22%  Similarity=0.264  Sum_probs=35.6

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCc
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEK  163 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~  163 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|.+
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            9 GQRPYECIEC-------GKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSEECSSS-------CCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CCcCcCCCCC-------CCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            8999999999       999999999999999999999999974

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.78  E-value=2.4e-09  Score=71.00  Aligned_cols=36  Identities=19%  Similarity=0.272  Sum_probs=34.8

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCE  162 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~  162 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|+
T Consensus         7 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            7 GENPYECSEC-------GKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             SCCSEECSSS-------CCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCccCCCc-------ChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            8999999999       99999999999999999999999995

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=2.1e-09  Score=72.85  Aligned_cols=38  Identities=18%  Similarity=0.166  Sum_probs=29.3

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKC  164 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C  164 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|.+|
T Consensus         9 ~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            9 GEKPYKCDVC-------HKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             TCCSEECSSS-------CCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCeeCccc-------CcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            6777777777       7777777777777777777777777776

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.78  E-value=1.9e-09  Score=73.15  Aligned_cols=37  Identities=19%  Similarity=0.249  Sum_probs=35.6

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCc
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEK  163 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~  163 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|.+
T Consensus         9 ~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            9 GEKPFECAEC-------GKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSEECSSS-------SCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCEECCCC-------CcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            8999999999       999999999999999999999999975

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=1.8e-09  Score=73.25  Aligned_cols=37  Identities=19%  Similarity=0.260  Sum_probs=35.5

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCc
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEK  163 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~  163 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|++
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            9 GEKPFQCEEC-------GKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSBCCSSS-------CCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CCcCCCCCCC-------CcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            8999999999       999999999999999999999999974

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=2.3e-09  Score=72.69  Aligned_cols=37  Identities=16%  Similarity=0.274  Sum_probs=35.6

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCc
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEK  163 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~  163 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|++
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            9 GENPFICSEC-------GKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             SCCSCBCTTT-------CCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCEECCcc-------CcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            8999999999       999999999999999999999999974

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=1.7e-09  Score=73.31  Aligned_cols=37  Identities=16%  Similarity=0.232  Sum_probs=35.6

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCc
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEK  163 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~  163 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|++
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            9 GEKPYECSDC-------GKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             SCCSSCCSSS-------CCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             CCCCcCCCCC-------CchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            8999999999       999999999999999999999999974

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.78  E-value=1.1e-09  Score=77.16  Aligned_cols=52  Identities=13%  Similarity=0.176  Sum_probs=48.4

Q ss_pred             cccccChHHHHHHHHhcCCCcccccccccccCCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccc
Q 014855           89 NKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWK  160 (417)
Q Consensus        89 gk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~  160 (417)
                      +|.|.....|..|+++|.             ++++|.|.+|       ++.|.....|.+|+++|+++++|.
T Consensus         3 ~k~~~~~~~l~~h~~~H~-------------~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQ-------------SEQPATCPIC-------YAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHT-------------SSCCEECTTT-------CCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             ccccCCCcchhhHHHhcC-------------CCCCccCCCC-------CcccCCHHHHHHHHHHhccCCCCC
Confidence            577888899999999998             8999999999       999999999999999999999974

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=2.3e-09  Score=72.70  Aligned_cols=37  Identities=22%  Similarity=0.283  Sum_probs=35.6

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCc
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEK  163 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~  163 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|++
T Consensus         9 ~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            9 GERHYECSEC-------GKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCEECSSS-------CCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             CCCCeECCcC-------CcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            8999999999       999999999999999999999999974

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=4e-10  Score=85.71  Aligned_cols=65  Identities=23%  Similarity=0.444  Sum_probs=55.7

Q ss_pred             HHHHHHHhhccCCCccccCcCCccccChhhHHHHHHHhCCCceeec-CCCccCCchHHHHHHhhcccc
Q 014855          144 TGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKICGTREYKCD-CGKLFSRRDSFITHRAFCDVL  210 (417)
Q Consensus       144 ~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~~~ekp~~C~-C~k~F~~~~~L~~H~~~h~~~  210 (417)
                      ..|..|++.|.+++++.|..|++.| ....|..|+..+++++|.|. |++.|. +..|..|+++|...
T Consensus         3 ~~L~~H~~~~c~~r~~~C~~C~~~~-~~~~L~~H~~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~   68 (75)
T 2d9k_A            3 SGSSGHEETECPLRLAVCQHCDLEL-SILKLKEHEDYCGARTELCGNCGRNVL-VKDLKTHPEVCGRE   68 (75)
T ss_dssp             CCCSCCCCCCCCCCCEECSSSCCEE-CHHHHHHHHHHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTB
T ss_pred             hHHHhhCcccCCCcccCCcccChHh-hHHHHHHHHhHcCCCceEcccCCCcCc-HHHHHHHHHHccCC
Confidence            3477898999999999999999999 48999999933899999999 999887 48999999988643

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=2.7e-09  Score=72.33  Aligned_cols=37  Identities=22%  Similarity=0.276  Sum_probs=35.5

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCc
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEK  163 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~  163 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|++
T Consensus         9 ~~~~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            9 GERHYECSEC-------GKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             SCCCEECSSS-------CCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCCCCCCCCC-------CcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            8999999999       999999999999999999999999974

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=2.3e-09  Score=72.55  Aligned_cols=37  Identities=24%  Similarity=0.319  Sum_probs=35.6

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCc
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEK  163 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~  163 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|.+
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            9 GEKPYKCNEC-------GKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCEECTTS-------CCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CCCCeecccc-------CChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            8999999999       999999999999999999999999974

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=2.5e-09  Score=72.40  Aligned_cols=37  Identities=22%  Similarity=0.331  Sum_probs=35.6

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCc
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEK  163 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~  163 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|.+
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            9 GEKPYICNEC-------GKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             SCCSEECSSS-------CCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCcCEECCCC-------ChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            8999999999       999999999999999999999999975

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=2.3e-09  Score=72.69  Aligned_cols=37  Identities=22%  Similarity=0.284  Sum_probs=35.6

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCc
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEK  163 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~  163 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|.|.+
T Consensus         9 ~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            9 GEKPYKCNEC-------GKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCBCSSS-------CCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCcCeECCCC-------CcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            8999999999       999999999999999999999999974

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=2.6e-09  Score=72.41  Aligned_cols=37  Identities=24%  Similarity=0.333  Sum_probs=35.6

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCc
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEK  163 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~  163 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|.|++
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            9 GGKPYQCNEC-------GKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             SSCSSSCCSS-------CCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CCCCeECCCC-------CcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            8999999999       999999999999999999999999974

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=2.5e-09  Score=72.42  Aligned_cols=37  Identities=22%  Similarity=0.295  Sum_probs=35.6

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCc
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEK  163 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~  163 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|++
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            9 GEKPFECSEC-------QKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSEECSSS-------CCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCcCCCCC-------CcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            8999999999       999999999999999999999999975

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.76  E-value=3.7e-09  Score=71.33  Aligned_cols=41  Identities=22%  Similarity=0.417  Sum_probs=38.8

Q ss_pred             hhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec-CC
Q 014855          151 SRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD-CG  191 (417)
Q Consensus       151 ~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~-C~  191 (417)
                      ..|+++++|+|.+|++.|..+..|.+|+++ +++++|.|. ||
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            468999999999999999999999999999 899999999 96

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=2.6e-09  Score=72.38  Aligned_cols=37  Identities=24%  Similarity=0.296  Sum_probs=35.6

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCc
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEK  163 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~  163 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|++
T Consensus         9 ~~~~~~C~~C-------~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            9 GEKPYECKVC-------SKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             SCCSEECSSS-------CCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCcCeECCCC-------CcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            8999999999       999999999999999999999999975

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=2.4e-09  Score=72.48  Aligned_cols=37  Identities=24%  Similarity=0.279  Sum_probs=35.6

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCc
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEK  163 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~  163 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|++
T Consensus         9 ~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            9 GEKPYNCEEC-------GKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSEECTTT-------CCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCcCccCCCC-------CCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            8999999999       999999999999999999999999974

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=3e-09  Score=70.44  Aligned_cols=36  Identities=17%  Similarity=0.200  Sum_probs=34.7

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCE  162 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~  162 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|.
T Consensus         7 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            7 GEKPYSCAEC-------KETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             SCCSCBCTTT-------CCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCCCeECCCC-------CCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            8999999999       99999999999999999999999984

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=3.2e-09  Score=72.06  Aligned_cols=40  Identities=28%  Similarity=0.521  Sum_probs=24.6

Q ss_pred             HhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec
Q 014855          150 FSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD  189 (417)
Q Consensus       150 ~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~  189 (417)
                      +++|+++++|+|.+|++.|.....|..|+++ +++++|.|+
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            3455666666666666666666666666666 556666654

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=2.6e-09  Score=72.55  Aligned_cols=37  Identities=22%  Similarity=0.270  Sum_probs=35.6

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCc
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEK  163 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~  163 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|.|++
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            9 GEKPYKCQVC-------GKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             SCCSCBCSSS-------CCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCcccCCCCC-------CcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            8999999999       999999999999999999999999974

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=2.9e-09  Score=72.07  Aligned_cols=37  Identities=24%  Similarity=0.332  Sum_probs=35.5

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCc
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEK  163 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~  163 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|++
T Consensus         9 ~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            9 GEKPYRCGEC-------GKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCEECSSS-------CCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CCCCeECCCC-------CCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            8999999999       999999999999999999999999974

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=2.9e-09  Score=72.25  Aligned_cols=37  Identities=19%  Similarity=0.283  Sum_probs=35.5

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCc
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEK  163 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~  163 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|++
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            9 GEKCYKCDVC-------GKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCBCSSS-------CCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CCCCeECCCC-------CcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            8999999999       999999999999999999999999974

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=2.9e-09  Score=72.15  Aligned_cols=37  Identities=24%  Similarity=0.307  Sum_probs=35.5

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCc
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEK  163 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~  163 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|++
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            9 GEKPYKCNEC-------GKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCTTT-------TCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             CCCCeECCcC-------ChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            8999999999       999999999999999999999999974

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=2.5e-09  Score=72.47  Aligned_cols=37  Identities=22%  Similarity=0.296  Sum_probs=35.5

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCc
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEK  163 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~  163 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|.+
T Consensus         9 ~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            9 GEKPYKCNEC-------GKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCTTCCSSS-------CCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCcCeECCCC-------CcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            8999999999       999999999999999999999999974

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=3.2e-09  Score=71.97  Aligned_cols=37  Identities=22%  Similarity=0.313  Sum_probs=35.6

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCc
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEK  163 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~  163 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|++
T Consensus         9 ~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            9 GKKLFKCNEC-------KKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SSCCCBCTTT-------CCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCEECCcc-------CcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            8999999999       999999999999999999999999974

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=3.4e-09  Score=71.86  Aligned_cols=37  Identities=22%  Similarity=0.311  Sum_probs=35.4

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCc
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEK  163 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~  163 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|..
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoh_A            9 GKKPYECKEC-------RKTFIQIGHLNQHKRVHTGERSSGPSS   45 (46)
T ss_dssp             CSCSCCCSSS-------CCCCSSHHHHHHHHHHCSSCCSCSTTC
T ss_pred             CCCCcCCCCc-------CchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            8999999999       999999999999999999999999963

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=2.5e-09  Score=72.52  Aligned_cols=40  Identities=20%  Similarity=0.257  Sum_probs=37.9

Q ss_pred             ccCCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcC
Q 014855          118 VERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKC  164 (417)
Q Consensus       118 ~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C  164 (417)
                      +.++++|.|.+|       ++.|.....|.+|+++|+++++|+|.+|
T Consensus         7 h~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            7 GEGEKPYQCSEC-------GKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             CSCCCTTCCSSS-------CCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCeeCCCC-------CcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            348999999999       9999999999999999999999999988

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=2.6e-09  Score=72.48  Aligned_cols=36  Identities=22%  Similarity=0.395  Sum_probs=35.0

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCE  162 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~  162 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|+
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            9 GEKPYKCSDC-------GKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             SCCCEECSSS-------CCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CCCCEECccc-------CCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            8999999999       99999999999999999999999996

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=2e-09  Score=73.02  Aligned_cols=37  Identities=16%  Similarity=0.145  Sum_probs=35.5

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCc
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEK  163 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~  163 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|+.
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            9 GEKPYSCNVC-------GKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             SCCSEEETTT-------TEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             CCCCeECccc-------ChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            8999999999       999999999999999999999999974

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=3.9e-09  Score=70.67  Aligned_cols=36  Identities=25%  Similarity=0.276  Sum_probs=34.8

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCE  162 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~  162 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|+
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            9 GMKPYVCNEC-------GKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             SSSSSCCTTT-------CCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCcCeECCCC-------CCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            8999999999       99999999999999999999999995

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=4.4e-09  Score=70.36  Aligned_cols=36  Identities=22%  Similarity=0.304  Sum_probs=34.8

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCE  162 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~  162 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|+
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            9 GEKPYECNEC-------QKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCCSEECTTT-------CCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCCCeECCCC-------CcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            8999999999       99999999999999999999999995

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.72  E-value=5.8e-09  Score=69.74  Aligned_cols=38  Identities=16%  Similarity=0.312  Sum_probs=19.2

Q ss_pred             ccCCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccC
Q 014855          118 VERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCE  162 (417)
Q Consensus       118 ~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~  162 (417)
                      +.++++|.|.+|       ++.|.....|.+|+++|+++++|+|.
T Consensus         5 h~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            5 SSGNGAFFCNEC-------DCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             CSSSCCBCCSSS-------CCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             cCCCCCEECCCC-------CCeeCChHHHHHHHHhhCCCCCccCC
Confidence            334455555554       55555555555555555555555543

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.72  E-value=7.7e-09  Score=69.10  Aligned_cols=41  Identities=17%  Similarity=0.331  Sum_probs=37.8

Q ss_pred             cccCCCCceecccccccccChHHHHHHHHhcCCCcccccccccccCCceeeCCC
Q 014855           75 KSLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPE  128 (417)
Q Consensus        75 ~~~~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~  128 (417)
                      +.|.++++|.|++|++.|..+..|.+|+++|.             ++++|.|++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-------------~~k~~~C~~   43 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTH-------------SDKSGPSSG   43 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHT-------------CTTCSSSCC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhC-------------CCCCccCCC
Confidence            46788999999999999999999999999999             889999974

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=8.4e-09  Score=69.51  Aligned_cols=42  Identities=29%  Similarity=0.381  Sum_probs=38.3

Q ss_pred             ccccCCCCceecccccccccChHHHHHHHHhcCCCcccccccccccCCceeeCCC
Q 014855           74 PKSLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPE  128 (417)
Q Consensus        74 ~~~~~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~  128 (417)
                      ...|.++++|+|++|++.|..+..|.+|+++|.             ++++|.|++
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~-------------~~k~~~C~~   45 (45)
T 2epu_A            4 GSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHT-------------GEKSGPSSG   45 (45)
T ss_dssp             CCCCCSCCSEEETTTTEEESSHHHHHHHHTTTS-------------SCCCCCSCC
T ss_pred             CCCCCCCcCccCCCCCCccCChHHHHHHHHHhC-------------CCCCCCCCC
Confidence            456788999999999999999999999999998             889999964

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.71  E-value=5.5e-09  Score=70.04  Aligned_cols=36  Identities=11%  Similarity=0.142  Sum_probs=34.8

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCE  162 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~  162 (417)
                      ++++|.|.+|       ++.|.....|..|+++|+++++|+|+
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            9 TRKRYECSKC-------QATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCSSEECTTT-------CCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CCCCeECCCC-------CCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            8999999999       99999999999999999999999995

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.71  E-value=4.2e-09  Score=69.46  Aligned_cols=37  Identities=16%  Similarity=0.248  Sum_probs=19.2

Q ss_pred             ccCCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCcccc
Q 014855          118 VERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKC  161 (417)
Q Consensus       118 ~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C  161 (417)
                      +.++++|.|++|       ++.|.....|..|+++|+++++|+|
T Consensus         5 h~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            5 SSGQRVYECQEC-------GKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             CCCCCCEECSSS-------CCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             cCCCCCeECCCC-------CCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            344555555555       5555555555555555555555544

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.71  E-value=3.1e-09  Score=71.26  Aligned_cols=36  Identities=8%  Similarity=0.110  Sum_probs=34.7

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCE  162 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~  162 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|.
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            9 GENPFKCSKC-------DRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCCSEECSSS-------SCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCCCeECCCC-------CchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            8999999999       99999999999999999999999984

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.70  E-value=4.6e-09  Score=69.65  Aligned_cols=35  Identities=20%  Similarity=0.272  Sum_probs=34.1

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCcccc
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKC  161 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C  161 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|
T Consensus         8 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            8 GEKPYPCEIC-------GTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             SSCCBCCSSS-------CCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCCCEECCCC-------CCccCCHHHHHHHHHhcCCCCCCCC
Confidence            8999999999       9999999999999999999999998

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.70  E-value=4.4e-09  Score=71.28  Aligned_cols=37  Identities=11%  Similarity=0.138  Sum_probs=35.5

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccC-CCccccCc
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHG-EKKWKCEK  163 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~-ekp~~C~~  163 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|++ +++|+|.+
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            9 KEKCFKCNKC-------EKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CSCCEECSSS-------CCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             CCCCEECcCC-------CCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            8999999999       9999999999999999999 99999974

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=4.9e-09  Score=71.08  Aligned_cols=37  Identities=22%  Similarity=0.287  Sum_probs=35.4

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCc
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEK  163 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~  163 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|..
T Consensus         9 ~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A            9 GEKPYECDVC-------RKAFSHHASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CSSSCBCTTT-------CCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred             CCCCcCCCCc-------CchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            8999999999       999999999999999999999999964

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=4e-09  Score=69.85  Aligned_cols=35  Identities=17%  Similarity=0.257  Sum_probs=34.1

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCcccc
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKC  161 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C  161 (417)
                      ++++|.|++|       ++.|.....|.+|+++|+++++|+|
T Consensus         8 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            8 GEKPYRCDQC-------GKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             SCCSBCCTTT-------TCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CCCCeeCCCc-------cchhCCHHHHHHHHHHhCCCCCCCC
Confidence            8999999999       9999999999999999999999998

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=3.6e-09  Score=70.86  Aligned_cols=36  Identities=14%  Similarity=0.213  Sum_probs=34.8

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCE  162 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~  162 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|+
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            9 GENPYECCEC-------GKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             SCCSCEETTT-------TEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCcCeeCCCC-------CCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            8999999999       99999999999999999999999995

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.69  E-value=1.1e-08  Score=69.40  Aligned_cols=42  Identities=26%  Similarity=0.245  Sum_probs=38.6

Q ss_pred             ccccCCCCceecccccccccChHHHHHHHHhcCCCcccccccccccCCceeeCCC
Q 014855           74 PKSLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPE  128 (417)
Q Consensus        74 ~~~~~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~  128 (417)
                      .+.|.++++|+|++|++.|..+..|.+|+++|.             ++++|.|.+
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~-------------~~k~~~C~~   45 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHT-------------GEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHS-------------SCCCSSCCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhC-------------CCCCCCCCC
Confidence            456888999999999999999999999999999             889999974

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.69  E-value=6e-09  Score=68.97  Aligned_cols=35  Identities=9%  Similarity=0.123  Sum_probs=34.1

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCcccc
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKC  161 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C  161 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|
T Consensus         8 ~~~~~~C~~C-------~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            8 GETPYLCGQC-------GKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             SSCCEECSSS-------CCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCCCeECCCC-------CcccCCHHHHHHHhhhcCCCCCCCC
Confidence            8999999999       9999999999999999999999998

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=1.3e-08  Score=69.41  Aligned_cols=44  Identities=30%  Similarity=0.354  Sum_probs=40.3

Q ss_pred             CccccCCCCceecc--cccccccChHHHHHHHHhcCCCcccccccccccCCceeeCCCC
Q 014855           73 SPKSLMATNRFLCE--ICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEP  129 (417)
Q Consensus        73 ~~~~~~~~k~~~C~--~Cgk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~C  129 (417)
                      +.+.|.++++|+|.  .|++.|..+..|.+|+++|.             ++++|.|.+|
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~-------------~~k~~~C~~C   48 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHS-------------GVKPSGPSSG   48 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSC-------------CCCSCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhC-------------CCCCCCCCCC
Confidence            45678889999998  89999999999999999998             8899999987

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=3.5e-09  Score=71.78  Aligned_cols=37  Identities=16%  Similarity=0.284  Sum_probs=35.5

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCc
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEK  163 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~  163 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|.|+.
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A            9 GERPFKCNEC-------GKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             CCCSCCCSSS-------CCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCCCeECCCC-------CcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            8999999999       999999999999999999999999974

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=7.3e-09  Score=70.66  Aligned_cols=39  Identities=13%  Similarity=0.158  Sum_probs=29.8

Q ss_pred             cCCceeeCC--CCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcC
Q 014855          119 ERKKVYVCP--EPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKC  164 (417)
Q Consensus       119 ~~~k~~~C~--~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C  164 (417)
                      .++++|.|.  .|       ++.|.....|.+|+++|+++++|+|.+|
T Consensus         8 ~~~k~~~C~~~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            8 TGEKPFACTWPGC-------GWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCCCEECCSSSC-------CCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCCCeECCCCCC-------CCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            367777776  66       7778777778888777777777877776

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=4.7e-09  Score=69.56  Aligned_cols=35  Identities=14%  Similarity=0.213  Sum_probs=34.1

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCcccc
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKC  161 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C  161 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|.|
T Consensus         8 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            8 GEKPYKCETC-------GARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             SSCSEECTTT-------CCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCCCEeCCCc-------ChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            8999999999       9999999999999999999999998

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.67  E-value=3.2e-09  Score=83.28  Aligned_cols=61  Identities=16%  Similarity=0.248  Sum_probs=45.6

Q ss_pred             hcCccccCCCCceecccccccccChHHHHHHHHhcCCCcccccccccccCCceeeCCCCCccCCCCCCcccCHHHHHHHH
Q 014855           71 ALSPKSLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHF  150 (417)
Q Consensus        71 ~~~~~~~~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~  150 (417)
                      .++.+.|.++++|+|++|++.|.....|.+|+++|.             ++++|.|..|       .+    ...|..|.
T Consensus        14 ~~~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht-------------~ekp~~C~~~-------~~----~~~~~~~~   69 (88)
T 1x6f_A           14 ILGNGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHN-------------EEFQKRAKRQ-------ER----RKQLLSKQ   69 (88)
T ss_dssp             CCCCCSCCCCSCEECSSSCCEESSHHHHHHHHHHHH-------------HHHHHHCCCC-------SC----CCCCCCCC
T ss_pred             eccccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhC-------------CCCCcccchh-------hh----HHHHHhhh
Confidence            344566778888888888888888888888888887             7888888777       32    33455666


Q ss_pred             hhccC
Q 014855          151 SRKHG  155 (417)
Q Consensus       151 ~~H~~  155 (417)
                      +.|.+
T Consensus        70 ~~~~~   74 (88)
T 1x6f_A           70 KYADG   74 (88)
T ss_dssp             CCCCC
T ss_pred             ccccc
Confidence            77766

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.66  E-value=7.9e-09  Score=69.30  Aligned_cols=36  Identities=17%  Similarity=0.159  Sum_probs=34.7

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCE  162 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~  162 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|+
T Consensus         9 ~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            9 AKTTSECQEC-------GKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             SSCCCCCTTT-------CCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCcCeECCCC-------CcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            8999999999       99999999999999999999999995

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=5.3e-09  Score=70.75  Aligned_cols=37  Identities=19%  Similarity=0.272  Sum_probs=35.4

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCc
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEK  163 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~  163 (417)
                      ++++|.|++|       ++.|.....|.+|+++|+++++|+|..
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            9 GEKPYECNQC-------GKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CCCSSEETTT-------TEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             CCCCeECCCC-------ChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            8999999999       999999999999999999999999964

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.65  E-value=1.6e-08  Score=66.57  Aligned_cols=39  Identities=23%  Similarity=0.402  Sum_probs=36.0

Q ss_pred             cccCCCCceecccccccccChHHHHHHHHhcCCCcccccccccccCCceeeC
Q 014855           75 KSLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVC  126 (417)
Q Consensus        75 ~~~~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C  126 (417)
                      +.|.++++|+|++|++.|.....|..|+++|.             ++++|.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-------------~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHT-------------GSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCC-------------CCSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhC-------------CCCCcCC
Confidence            45788999999999999999999999999998             8889987

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=1.1e-08  Score=68.47  Aligned_cols=42  Identities=29%  Similarity=0.372  Sum_probs=38.5

Q ss_pred             CccccCCCCceecccccccccChHHHHHHHHhcCCCcccccccccccCCceeeCC
Q 014855           73 SPKSLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCP  127 (417)
Q Consensus        73 ~~~~~~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~  127 (417)
                      +.+.|.++++|.|++|++.|.....|.+|+++|.             ++++|.|.
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~-------------~~~~~~C~   44 (44)
T 2eox_A            3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHT-------------RKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHC-------------CCCCCSCC
T ss_pred             CCcCCCCCCCeECcccCcccCCHHHHHHHHHHhC-------------CCCCCCCC
Confidence            5677889999999999999999999999999998             88999884

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=5.4e-09  Score=70.76  Aligned_cols=36  Identities=14%  Similarity=0.121  Sum_probs=34.9

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCE  162 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~  162 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|+|.
T Consensus         9 ~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            9 GEKPFQCKEC-------GMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCSEECSSS-------CCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             CCCCeeCccc-------ChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            8999999999       99999999999999999999999996

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.62  E-value=1.4e-08  Score=68.15  Aligned_cols=36  Identities=19%  Similarity=0.095  Sum_probs=34.5

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCE  162 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~  162 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|.|.
T Consensus         9 ~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~~g   44 (44)
T 2epv_A            9 GEKPYECNEC-------GKAFIWKSLLIVHERTHAGVSGPSSG   44 (44)
T ss_dssp             CCCSEECSSS-------CCEESSHHHHHHHHGGGSSCSCCCCC
T ss_pred             CCcCeECCCC-------CcccCchHHHHHHHhHhcCCCCCCCC
Confidence            8999999999       99999999999999999999999883

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.60  E-value=2.7e-09  Score=81.00  Aligned_cols=64  Identities=19%  Similarity=0.315  Sum_probs=55.1

Q ss_pred             HHHHHHHhcCCCcccccccccccCCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcCCccccChhhHHH
Q 014855           97 NLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKA  176 (417)
Q Consensus        97 ~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~  176 (417)
                      .|..|+++|.             +++++.|..|       ++.| ....|..|+ .|.++++|.|..|++.|. +..|..
T Consensus         4 ~L~~H~~~~c-------------~~r~~~C~~C-------~~~~-~~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~   60 (75)
T 2d9k_A            4 GSSGHEETEC-------------PLRLAVCQHC-------DLEL-SILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKT   60 (75)
T ss_dssp             CCSCCCCCCC-------------CCCCEECSSS-------CCEE-CHHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGT
T ss_pred             HHHhhCcccC-------------CCcccCCccc-------ChHh-hHHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHH
Confidence            4556666666             8999999999       9999 499999999 899999999999999987 599999


Q ss_pred             HHHH-hCC
Q 014855          177 HSKI-CGT  183 (417)
Q Consensus       177 H~~~-~~e  183 (417)
                      |+++ .++
T Consensus        61 H~~~c~~~   68 (75)
T 2d9k_A           61 HPEVCGRE   68 (75)
T ss_dssp             HHHHBTTB
T ss_pred             HHHHccCC
Confidence            9998 443

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.58  E-value=1.3e-08  Score=68.59  Aligned_cols=36  Identities=17%  Similarity=0.257  Sum_probs=24.5

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCE  162 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~  162 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++++|.|.
T Consensus         9 ~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            9 GQKPFECTHC-------GKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             SCCSEEETTT-------TEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCcCccCCCC-------CCccCChHHHHHHHHHhCCCCCCCCC
Confidence            6666666666       66666666666666666666666665

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.56  E-value=1.6e-09  Score=85.06  Aligned_cols=57  Identities=14%  Similarity=0.359  Sum_probs=43.3

Q ss_pred             HHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec-CCCccCCchHHHHHHhhccc
Q 014855          149 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD-CGKLFSRRDSFITHRAFCDV  209 (417)
Q Consensus       149 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~-C~k~F~~~~~L~~H~~~h~~  209 (417)
                      |.++|+++++|+|.+|++.|.....|..|+++ +++++|+|. |.    ++..|..|.+.|..
T Consensus        16 ~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~~~~~~~   74 (88)
T 1x6f_A           16 GNGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE----RRKQLLSKQKYADG   74 (88)
T ss_dssp             CCCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS----CCCCCCCCCCCCCC
T ss_pred             cccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh----hHHHHHhhhccccc
Confidence            34568888889998899999888888888888 788888886 64    34455666666643

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.48  E-value=5.1e-08  Score=62.41  Aligned_cols=35  Identities=20%  Similarity=0.355  Sum_probs=26.3

Q ss_pred             hhccCCCccccCcCCccccChhhHHHHHHH-hCCCc
Q 014855          151 SRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTRE  185 (417)
Q Consensus       151 ~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp  185 (417)
                      ++|+++++|.|.+|++.|.....|..|+++ ++++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            467777888888888888888888888777 56553

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.47  E-value=5.3e-08  Score=62.34  Aligned_cols=32  Identities=19%  Similarity=0.456  Sum_probs=26.5

Q ss_pred             HHhhccCCCccccCcCCccccChhhHHHHHHH
Q 014855          149 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI  180 (417)
Q Consensus       149 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~  180 (417)
                      |+++|+++++|+|.+|++.|.....|..|+++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~   33 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKR   33 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGG
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHH
Confidence            66778888888888888888888888888877

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.47  E-value=7.4e-08  Score=62.61  Aligned_cols=37  Identities=22%  Similarity=0.471  Sum_probs=32.8

Q ss_pred             cCCCCceecccccccccChHHHHHHHHhcCCCcccccccccccCCceeeC
Q 014855           77 LMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVC  126 (417)
Q Consensus        77 ~~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C  126 (417)
                      |.++++|+|++||+.|.....|..|+++|.             ++++|.|
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-------------~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHR-------------RDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTC-------------CSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcC-------------CCcccee
Confidence            456789999999999999999999999998             7788765

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.39  E-value=1.8e-07  Score=58.83  Aligned_cols=32  Identities=22%  Similarity=0.503  Sum_probs=19.2

Q ss_pred             ccCCCccccCcCCccccChhhHHHHHHH-hCCC
Q 014855          153 KHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTR  184 (417)
Q Consensus       153 H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ek  184 (417)
                      |+++++|.|.+|++.|.....|..|+++ ++++
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCC
Confidence            4556666666666666666666666665 4444

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.36  E-value=2.1e-07  Score=58.63  Aligned_cols=28  Identities=18%  Similarity=0.587  Sum_probs=15.8

Q ss_pred             ccCCCccccCcCCccccChhhHHHHHHH
Q 014855          153 KHGEKKWKCEKCSKKYAVQSDWKAHSKI  180 (417)
Q Consensus       153 H~~ekp~~C~~C~k~F~~~~~L~~H~~~  180 (417)
                      |+++++|+|.+|++.|.....|.+|+++
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~   29 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKV   29 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGG
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHH
Confidence            4455555555555555555555555555

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.34  E-value=3.3e-07  Score=59.45  Aligned_cols=35  Identities=11%  Similarity=0.239  Sum_probs=26.1

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCcccc
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKC  161 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C  161 (417)
                      ++++|.|.+|       ++.|.....|..|+++|+++++|.|
T Consensus         3 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            3 PPRSYTCSFC-------KREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             CSSSEECTTT-------CCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCceECCCC-------CcccCCHHHHHHHHHHcCCCcccee
Confidence            5677777777       7777777777777777777777765

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.32  E-value=4.3e-07  Score=67.04  Aligned_cols=43  Identities=26%  Similarity=0.346  Sum_probs=37.6

Q ss_pred             ccccCCCCceeccc--ccccccChHHHHHHH-HhcCCCcccccccccccCCceeeCCCC
Q 014855           74 PKSLMATNRFLCEI--CNKGFQRDQNLQLHR-RGHNLPWKLKQRTNKVERKKVYVCPEP  129 (417)
Q Consensus        74 ~~~~~~~k~~~C~~--Cgk~F~~~~~L~~H~-~~H~~p~~~~~~~~~~~~~k~~~C~~C  129 (417)
                      +....++|||+|.+  |+|.|....+|.+|+ ++|+             ++|||.|.+-
T Consensus        19 ~~~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHT-------------gEKP~~~~~~   64 (73)
T 1x3c_A           19 PTRYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHK-------------SDLPAFSAEV   64 (73)
T ss_dssp             SSSSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSS-------------SCCCCCCCSC
T ss_pred             cccccCCCCeECCCCCcChhHcCHHHHHHHhhhhCC-------------CCCCcccccc
Confidence            45678899999975  999999999999997 6899             8999998763

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.30  E-value=2.9e-07  Score=57.54  Aligned_cols=26  Identities=35%  Similarity=0.635  Sum_probs=25.0

Q ss_pred             CceecccccccccChHHHHHHHHhcC
Q 014855           81 NRFLCEICNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        81 k~~~C~~Cgk~F~~~~~L~~H~~~H~  106 (417)
                      ++|.|++||+.|.....|..|+++|.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~   26 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHE   26 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHT
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhC
Confidence            57999999999999999999999998

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.30  E-value=5e-07  Score=56.84  Aligned_cols=30  Identities=27%  Similarity=0.523  Sum_probs=28.5

Q ss_pred             cCCCCceecccccccccChHHHHHHHHhcC
Q 014855           77 LMATNRFLCEICNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        77 ~~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~  106 (417)
                      |.++++|.|.+|++.|.....|.+|+++|.
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   31 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHT   31 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGT
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcC
Confidence            567899999999999999999999999998

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.30  E-value=4.1e-07  Score=58.03  Aligned_cols=32  Identities=22%  Similarity=0.525  Sum_probs=29.8

Q ss_pred             cccCCCCceecccccccccChHHHHHHHHhcC
Q 014855           75 KSLMATNRFLCEICNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        75 ~~~~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~  106 (417)
                      +.|.++++|.|.+|++.|.....|..|+++|+
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~   33 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNH   33 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHc
Confidence            35778999999999999999999999999998

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.29  E-value=5.1e-07  Score=56.66  Aligned_cols=30  Identities=23%  Similarity=0.495  Sum_probs=28.3

Q ss_pred             cCCCCceecccccccccChHHHHHHHHhcC
Q 014855           77 LMATNRFLCEICNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        77 ~~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~  106 (417)
                      |.++++|.|.+|++.|.....|.+|+++|+
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~   31 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVH   31 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTS
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHc
Confidence            567899999999999999999999999998

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.27  E-value=6.1e-07  Score=66.24  Aligned_cols=36  Identities=11%  Similarity=0.087  Sum_probs=22.9

Q ss_pred             CCceeeCCC--CCccCCCCCCcccCHHHHHHHH-hhccCCCccccC
Q 014855          120 RKKVYVCPE--PTCVHHDPSRALGDLTGIKKHF-SRKHGEKKWKCE  162 (417)
Q Consensus       120 ~~k~~~C~~--C~C~~~~~~k~f~~~~~L~~H~-~~H~~ekp~~C~  162 (417)
                      ++|||+|.+  |       +++|....+|.+|+ ++|+++|||.|.
T Consensus        24 GEKPYkC~~~~C-------gKaFsr~s~L~~H~rriHTgEKP~~~~   62 (73)
T 1x3c_A           24 PYRPYRCVHQGC-------FAAFTIQQNLILHYQAVHKSDLPAFSA   62 (73)
T ss_dssp             SSCSCBCCSTTC-------CCBCSSHHHHHHHHHHHSSSCCCCCCC
T ss_pred             CCCCeECCCCCc-------ChhHcCHHHHHHHhhhhCCCCCCcccc
Confidence            666666654  4       66666666666665 456666666664

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.23  E-value=3.8e-07  Score=58.48  Aligned_cols=30  Identities=17%  Similarity=0.283  Sum_probs=21.4

Q ss_pred             hhccCCCccccCcCCccccChhhHHHH-HHH
Q 014855          151 SRKHGEKKWKCEKCSKKYAVQSDWKAH-SKI  180 (417)
Q Consensus       151 ~~H~~ekp~~C~~C~k~F~~~~~L~~H-~~~  180 (417)
                      ++|++++||+|.+|++.|..+..|..| +++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~   32 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQK   32 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHH
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHH
Confidence            456777777777777777777777777 555

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.22  E-value=6.5e-07  Score=57.14  Aligned_cols=33  Identities=24%  Similarity=0.348  Sum_probs=22.8

Q ss_pred             hhccCCCccccCcCCccccCh-hhHHHHHHH-hCC
Q 014855          151 SRKHGEKKWKCEKCSKKYAVQ-SDWKAHSKI-CGT  183 (417)
Q Consensus       151 ~~H~~ekp~~C~~C~k~F~~~-~~L~~H~~~-~~e  183 (417)
                      ++|+++++|+|.+|++.|... ..|..|+++ +++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            356677777777777777777 777777766 444

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.20  E-value=7.2e-07  Score=57.29  Aligned_cols=34  Identities=15%  Similarity=0.408  Sum_probs=17.8

Q ss_pred             ccCCCccccC--cCCccccChhhHHHHHHH-hCCCce
Q 014855          153 KHGEKKWKCE--KCSKKYAVQSDWKAHSKI-CGTREY  186 (417)
Q Consensus       153 H~~ekp~~C~--~C~k~F~~~~~L~~H~~~-~~ekp~  186 (417)
                      |+++++|.|.  .|++.|.....|.+|+++ +++++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            3445555555  355555555555555555 444443

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.19  E-value=3.7e-07  Score=58.82  Aligned_cols=25  Identities=20%  Similarity=0.465  Sum_probs=15.9

Q ss_pred             cCCCccccCcCCccccChhhHHHHH
Q 014855          154 HGEKKWKCEKCSKKYAVQSDWKAHS  178 (417)
Q Consensus       154 ~~ekp~~C~~C~k~F~~~~~L~~H~  178 (417)
                      .+||||+|.+|||+|..+++|++|+
T Consensus         4 ~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            4 LKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCccCeECCCCCCccCCHhHccCcC
Confidence            4566666666666666666666665

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.18  E-value=1e-06  Score=55.68  Aligned_cols=29  Identities=24%  Similarity=0.516  Sum_probs=17.8

Q ss_pred             hccCCCccccCcCCccccChhhHHHHHHH
Q 014855          152 RKHGEKKWKCEKCSKKYAVQSDWKAHSKI  180 (417)
Q Consensus       152 ~H~~ekp~~C~~C~k~F~~~~~L~~H~~~  180 (417)
                      +|.++++|+|.+|++.|.....|..|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~   31 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRK   31 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHH
Confidence            35556666666666666666666666655

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.17  E-value=9.4e-07  Score=55.98  Aligned_cols=29  Identities=28%  Similarity=0.422  Sum_probs=16.9

Q ss_pred             hccCCCccccCcCCccccChhhHHHHHHH
Q 014855          152 RKHGEKKWKCEKCSKKYAVQSDWKAHSKI  180 (417)
Q Consensus       152 ~H~~ekp~~C~~C~k~F~~~~~L~~H~~~  180 (417)
                      .|+++++|+|.+|++.|.....|..|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~   31 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNR   31 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHH
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHH
Confidence            35555566666666666666666666555

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.17  E-value=1.4e-06  Score=55.13  Aligned_cols=32  Identities=25%  Similarity=0.470  Sum_probs=29.6

Q ss_pred             cccCCCCceecccccccccChHHHHHHHHhcC
Q 014855           75 KSLMATNRFLCEICNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        75 ~~~~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~  106 (417)
                      ..+.++++|+|.+|++.|.....|.+|+++|.
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elq_A            2 SSGSSGKPFKCSLCEYATRSKSNLKAHMNRHS   33 (36)
T ss_dssp             CSSCCCCSEECSSSSCEESCHHHHHHHHHHSS
T ss_pred             CCCCCCCCccCCCCCchhCCHHHHHHHHHHhc
Confidence            35778899999999999999999999999997

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.17  E-value=1.3e-06  Score=55.38  Aligned_cols=31  Identities=23%  Similarity=0.388  Sum_probs=29.0

Q ss_pred             ccCCCCceecccccccccChHHHHHHHHhcC
Q 014855           76 SLMATNRFLCEICNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        76 ~~~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~  106 (417)
                      .+.++++|+|.+|++.|.....|.+|+++|.
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHG   33 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTS
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhc
Confidence            4677899999999999999999999999997

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.17  E-value=1.1e-06  Score=54.87  Aligned_cols=31  Identities=16%  Similarity=0.270  Sum_probs=18.4

Q ss_pred             eeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccc
Q 014855          123 VYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWK  160 (417)
Q Consensus       123 ~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~  160 (417)
                      +|.|.+|       ++.|.....|..|+++|+++++|.
T Consensus         2 p~~C~~C-------~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            2 KFACPEC-------PKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCSSS-------CCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             cccCCCC-------CchhCCHHHHHHHHHHhCCCCCCC
Confidence            4556655       566666666666666666665553

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.16  E-value=1.3e-06  Score=56.94  Aligned_cols=31  Identities=23%  Similarity=0.279  Sum_probs=28.5

Q ss_pred             ccCCCCceeccc--ccccccChHHHHHHHHhcC
Q 014855           76 SLMATNRFLCEI--CNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        76 ~~~~~k~~~C~~--Cgk~F~~~~~L~~H~~~H~  106 (417)
                      .+.++|+|+|++  |++.|..+.+|++|+++|+
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Ht   35 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHT   35 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHS
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence            457789999986  9999999999999999998

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.16  E-value=1.3e-06  Score=55.11  Aligned_cols=31  Identities=26%  Similarity=0.413  Sum_probs=29.1

Q ss_pred             ccCCCCceecccccccccChHHHHHHHHhcC
Q 014855           76 SLMATNRFLCEICNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        76 ~~~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~  106 (417)
                      .|.++++|+|.+|++.|.....|.+|+++|.
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHT   33 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHcc
Confidence            4678899999999999999999999999997

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.15  E-value=1.1e-06  Score=57.24  Aligned_cols=27  Identities=22%  Similarity=0.345  Sum_probs=13.1

Q ss_pred             cCCCccccCc--CCccccChhhHHHHHHH
Q 014855          154 HGEKKWKCEK--CSKKYAVQSDWKAHSKI  180 (417)
Q Consensus       154 ~~ekp~~C~~--C~k~F~~~~~L~~H~~~  180 (417)
                      +++|||+|.+  |+|+|.+++.|++|+++
T Consensus         5 ~gekp~~C~~~~C~k~F~~~~~L~~H~r~   33 (38)
T 2eln_A            5 SSGILLKCPTDGCDYSTPDKYKLQAHLKV   33 (38)
T ss_dssp             SCCCCEECSSSSCCCEESCHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCccCCHHHHHHHHHh
Confidence            4444555543  55555555555555444

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.15  E-value=9.1e-07  Score=56.37  Aligned_cols=30  Identities=20%  Similarity=0.295  Sum_probs=28.6

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGE  156 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~e  156 (417)
                      ++++|.|++|       ++.|.....|.+|+++|+++
T Consensus         8 ~~k~~~C~~C-------~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            8 GIKPFQCPDC-------DRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSSBCCTTT-------CCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCCccCCCC-------CcccCcHHHHHHHHHHhccC
Confidence            8999999999       99999999999999999875

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.14  E-value=1.6e-06  Score=54.80  Aligned_cols=28  Identities=25%  Similarity=0.546  Sum_probs=17.6

Q ss_pred             ccCCCccccCcCCccccChhhHHHHHHH
Q 014855          153 KHGEKKWKCEKCSKKYAVQSDWKAHSKI  180 (417)
Q Consensus       153 H~~ekp~~C~~C~k~F~~~~~L~~H~~~  180 (417)
                      |.++++|.|.+|++.|.....|..|+++
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~   31 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKLL   31 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHHH
Confidence            5556666666666666666666666665

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.11  E-value=1.5e-06  Score=55.37  Aligned_cols=32  Identities=25%  Similarity=0.414  Sum_probs=29.4

Q ss_pred             cccCCCCceecccccccccCh-HHHHHHHHhcC
Q 014855           75 KSLMATNRFLCEICNKGFQRD-QNLQLHRRGHN  106 (417)
Q Consensus        75 ~~~~~~k~~~C~~Cgk~F~~~-~~L~~H~~~H~  106 (417)
                      +.|.++++|+|++|++.|... ..|.+|+++|.
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~   34 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHE   34 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHH
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcC
Confidence            357788999999999999999 99999999997

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.11  E-value=1.1e-06  Score=60.10  Aligned_cols=27  Identities=22%  Similarity=0.588  Sum_probs=15.2

Q ss_pred             ccCCCccccCcCCccccChhhHHHHHH
Q 014855          153 KHGEKKWKCEKCSKKYAVQSDWKAHSK  179 (417)
Q Consensus       153 H~~ekp~~C~~C~k~F~~~~~L~~H~~  179 (417)
                      |+++|+|+|.+|+|.|.....|..|++
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~   28 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYA   28 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHH
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhh
Confidence            455555555555555555555555555

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.10  E-value=1.9e-06  Score=54.36  Aligned_cols=31  Identities=29%  Similarity=0.559  Sum_probs=28.8

Q ss_pred             ccCCCCceecccccccccChHHHHHHHHhcC
Q 014855           76 SLMATNRFLCEICNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        76 ~~~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~  106 (417)
                      .+.++++|.|++|++.|..+..|.+|+++|.
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHT   33 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHS
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhc
Confidence            4677899999999999999999999999997

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.09  E-value=2.1e-06  Score=54.31  Aligned_cols=31  Identities=42%  Similarity=0.581  Sum_probs=28.5

Q ss_pred             ccCCCCceecccccccccChHHHHHHHHhcC
Q 014855           76 SLMATNRFLCEICNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        76 ~~~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~  106 (417)
                      .+..+++|+|++|++.|.....|..|+++|.
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHT   33 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhC
Confidence            3567889999999999999999999999997

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.07  E-value=1.3e-06  Score=56.15  Aligned_cols=27  Identities=33%  Similarity=0.720  Sum_probs=25.2

Q ss_pred             ccCCCCceecccccccccChHHHHHHH
Q 014855           76 SLMATNRFLCEICNKGFQRDQNLQLHR  102 (417)
Q Consensus        76 ~~~~~k~~~C~~Cgk~F~~~~~L~~H~  102 (417)
                      .+.++|+|+|++|||.|..+.+|.+|+
T Consensus         2 ~~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            2 SLLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CSSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCCccCeECCCCCCccCCHhHccCcC
Confidence            467899999999999999999999998

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.07  E-value=2.2e-06  Score=50.42  Aligned_cols=27  Identities=22%  Similarity=0.477  Sum_probs=24.9

Q ss_pred             CCceecccccccccChHHHHHHHHhcC
Q 014855           80 TNRFLCEICNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        80 ~k~~~C~~Cgk~F~~~~~L~~H~~~H~  106 (417)
                      +++|.|++||+.|.....|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            468999999999999999999999884

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.06  E-value=2.4e-06  Score=54.05  Aligned_cols=28  Identities=29%  Similarity=0.600  Sum_probs=14.9

Q ss_pred             ccCCCccccCcCCccccChhhHHHHHHH
Q 014855          153 KHGEKKWKCEKCSKKYAVQSDWKAHSKI  180 (417)
Q Consensus       153 H~~ekp~~C~~C~k~F~~~~~L~~H~~~  180 (417)
                      |.++++|.|.+|++.|.....|..|+++
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~   31 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRI   31 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHH
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHH
Confidence            3445555555555555555555555554

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.06  E-value=1.8e-06  Score=51.00  Aligned_cols=27  Identities=30%  Similarity=0.696  Sum_probs=24.8

Q ss_pred             CCceecccccccccChHHHHHHHHhcC
Q 014855           80 TNRFLCEICNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        80 ~k~~~C~~Cgk~F~~~~~L~~H~~~H~  106 (417)
                      +++|+|++||+.|.....|.+|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            468999999999999999999999884

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.03  E-value=9.7e-07  Score=59.96  Aligned_cols=38  Identities=16%  Similarity=0.464  Sum_probs=29.3

Q ss_pred             HHHHhhccCCCccccC--cCCccccChhhHHHHHHH-hCCC
Q 014855          147 KKHFSRKHGEKKWKCE--KCSKKYAVQSDWKAHSKI-CGTR  184 (417)
Q Consensus       147 ~~H~~~H~~ekp~~C~--~C~k~F~~~~~L~~H~~~-~~ek  184 (417)
                      ..|...|+++++|+|.  .||+.|...+.|++|+++ +++|
T Consensus         7 ~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            7 IDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            3455668888888885  688888888888888888 5543

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.02  E-value=4.3e-06  Score=61.55  Aligned_cols=26  Identities=15%  Similarity=0.330  Sum_probs=11.3

Q ss_pred             CCCccccCcCCccccChhhHHHHHHH
Q 014855          155 GEKKWKCEKCSKKYAVQSDWKAHSKI  180 (417)
Q Consensus       155 ~ekp~~C~~C~k~F~~~~~L~~H~~~  180 (417)
                      ++|||+|.+|+|.|..+..|++|+++
T Consensus        10 ~ekpy~C~~CgK~F~~~s~L~~H~r~   35 (66)
T 2epp_A           10 EAGILPCGLCGKVFTDANRLRQHEAQ   35 (66)
T ss_dssp             CCCCCCCTTTCCCCSCHHHHHHHHHH
T ss_pred             CccCcCCCCCCCccCCHHHHHhhhhh
Confidence            34444444444444444444444444

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.01  E-value=3.1e-06  Score=57.75  Aligned_cols=30  Identities=23%  Similarity=0.531  Sum_probs=28.5

Q ss_pred             cCCCCceecccccccccChHHHHHHHH-hcC
Q 014855           77 LMATNRFLCEICNKGFQRDQNLQLHRR-GHN  106 (417)
Q Consensus        77 ~~~~k~~~C~~Cgk~F~~~~~L~~H~~-~H~  106 (417)
                      |+++++|.|.+||+.|....+|.+|++ +|.
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~   32 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHL   32 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSC
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcC
Confidence            678899999999999999999999999 997

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.99  E-value=3.8e-06  Score=53.74  Aligned_cols=34  Identities=12%  Similarity=0.238  Sum_probs=31.4

Q ss_pred             CCceeeCCC--CCccCCCCCCcccCHHHHHHHHhhccCCCccc
Q 014855          120 RKKVYVCPE--PTCVHHDPSRALGDLTGIKKHFSRKHGEKKWK  160 (417)
Q Consensus       120 ~~k~~~C~~--C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~  160 (417)
                      ++++|.|.+  |       ++.|.....|.+|+++|+++++|.
T Consensus         3 ~~k~~~C~~~~C-------~k~f~~~~~L~~H~~~H~~~k~~~   38 (38)
T 1bhi_A            3 DDKPFLCTAPGC-------GQRFTNEDHLAVHKHKHEMTLKFG   38 (38)
T ss_dssp             TCCCEECCCTTT-------CCEESSHHHHHHHHHHHHTTTTTC
T ss_pred             CCcceECCCCCC-------CcccCCHHHHHHHHHHhCCCCCCC
Confidence            789999994  8       999999999999999999999873

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=97.98  E-value=3.6e-07  Score=56.66  Aligned_cols=26  Identities=31%  Similarity=0.539  Sum_probs=24.8

Q ss_pred             CceecccccccccChHHHHHHHHhcC
Q 014855           81 NRFLCEICNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        81 k~~~C~~Cgk~F~~~~~L~~H~~~H~  106 (417)
                      ++|+|++||+.|....+|.+|+++|.
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~   26 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAF   26 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSS
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHc
Confidence            57999999999999999999999998

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.97  E-value=5.5e-06  Score=52.30  Aligned_cols=30  Identities=13%  Similarity=0.183  Sum_probs=16.9

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGE  156 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~e  156 (417)
                      ++++|.|.+|       ++.|.....|.+|+++|+++
T Consensus         6 ~~k~~~C~~C-------~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            6 SGLLYDCHIC-------ERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CCCCEECSSS-------CCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCeECCCC-------CCccCCHHHHHHHHHHhcCC
Confidence            4555555555       55555555555555555544

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.94  E-value=5.4e-06  Score=49.52  Aligned_cols=27  Identities=19%  Similarity=0.549  Sum_probs=25.4

Q ss_pred             CCceecccccccccChHHHHHHHHhcC
Q 014855           80 TNRFLCEICNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        80 ~k~~~C~~Cgk~F~~~~~L~~H~~~H~  106 (417)
                      +++|.|.+||+.|.....|..|+++|.
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~   27 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHD   27 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhc
Confidence            478999999999999999999999997

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.94  E-value=4.7e-06  Score=49.60  Aligned_cols=26  Identities=38%  Similarity=0.685  Sum_probs=24.8

Q ss_pred             CceecccccccccChHHHHHHHHhcC
Q 014855           81 NRFLCEICNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        81 k~~~C~~Cgk~F~~~~~L~~H~~~H~  106 (417)
                      ++|.|++||+.|.....|..|+++|.
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~   26 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHE   26 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGG
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhc
Confidence            57999999999999999999999997

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=97.93  E-value=5.5e-06  Score=52.86  Aligned_cols=28  Identities=29%  Similarity=0.495  Sum_probs=16.6

Q ss_pred             ccCCCccccCc--CCccccChhhHHHHHHH
Q 014855          153 KHGEKKWKCEK--CSKKYAVQSDWKAHSKI  180 (417)
Q Consensus       153 H~~ekp~~C~~--C~k~F~~~~~L~~H~~~  180 (417)
                      |+++++|.|.+  ||+.|.....|.+|+++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~   32 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRW   32 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHh
Confidence            45556666653  66666666666666655

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.93  E-value=4.7e-06  Score=49.27  Aligned_cols=27  Identities=26%  Similarity=0.659  Sum_probs=25.2

Q ss_pred             CCceecccccccccChHHHHHHHHhcC
Q 014855           80 TNRFLCEICNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        80 ~k~~~C~~Cgk~F~~~~~L~~H~~~H~  106 (417)
                      +++|.|.+|++.|.....|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcC
Confidence            468999999999999999999999986

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.92  E-value=7.7e-06  Score=60.16  Aligned_cols=31  Identities=26%  Similarity=0.525  Sum_probs=29.1

Q ss_pred             ccCCCCceecccccccccChHHHHHHHHhcC
Q 014855           76 SLMATNRFLCEICNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        76 ~~~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~  106 (417)
                      .+.++|+|+|.+|+|.|..+.+|.+|+++|+
T Consensus         7 ~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Ht   37 (66)
T 2epp_A            7 GLREAGILPCGLCGKVFTDANRLRQHEAQHG   37 (66)
T ss_dssp             SCCCCCCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             CCCCccCcCCCCCCCccCCHHHHHhhhhhhC
Confidence            4677899999999999999999999999998

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.89  E-value=6.4e-06  Score=48.89  Aligned_cols=26  Identities=38%  Similarity=0.982  Sum_probs=24.7

Q ss_pred             CceecccccccccChHHHHHHHHhcC
Q 014855           81 NRFLCEICNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        81 k~~~C~~Cgk~F~~~~~L~~H~~~H~  106 (417)
                      ++|.|++||+.|.....|..|+++|.
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~   26 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHT   26 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHS
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhc
Confidence            47999999999999999999999997

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=97.86  E-value=7.5e-06  Score=52.23  Aligned_cols=30  Identities=27%  Similarity=0.557  Sum_probs=27.6

Q ss_pred             cCCCCceeccc--ccccccChHHHHHHHHhcC
Q 014855           77 LMATNRFLCEI--CNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        77 ~~~~k~~~C~~--Cgk~F~~~~~L~~H~~~H~  106 (417)
                      +.++++|.|.+  ||+.|.....|.+|+++|.
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~   34 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHT   34 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence            56789999995  9999999999999999997

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.06  E-value=2.2e-06  Score=49.97  Aligned_cols=26  Identities=35%  Similarity=0.742  Sum_probs=24.0

Q ss_pred             CceecccccccccChHHHHHHHHhcC
Q 014855           81 NRFLCEICNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        81 k~~~C~~Cgk~F~~~~~L~~H~~~H~  106 (417)
                      |+|.|++||+.|.....|..|+++|.
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            57999999999999999999999873

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.84  E-value=8.5e-06  Score=48.62  Aligned_cols=26  Identities=19%  Similarity=0.476  Sum_probs=24.6

Q ss_pred             CceecccccccccChHHHHHHHHhcC
Q 014855           81 NRFLCEICNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        81 k~~~C~~Cgk~F~~~~~L~~H~~~H~  106 (417)
                      ++|.|.+||+.|.....|..|+++|+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~   26 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHc
Confidence            47999999999999999999999998

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.81  E-value=7.3e-06  Score=48.24  Aligned_cols=24  Identities=21%  Similarity=0.314  Sum_probs=13.3

Q ss_pred             Cceeec-CCCccCCchHHHHHHhhc
Q 014855          184 REYKCD-CGKLFSRRDSFITHRAFC  207 (417)
Q Consensus       184 kp~~C~-C~k~F~~~~~L~~H~~~h  207 (417)
                      +||.|. ||+.|..++.|.+|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhc
Confidence            455555 555555555555555544

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.81  E-value=9.5e-06  Score=51.72  Aligned_cols=31  Identities=13%  Similarity=0.261  Sum_probs=28.7

Q ss_pred             cCCceeeCCCCCccCCCCCCcccCHHHHHHH-HhhccCC
Q 014855          119 ERKKVYVCPEPTCVHHDPSRALGDLTGIKKH-FSRKHGE  156 (417)
Q Consensus       119 ~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H-~~~H~~e  156 (417)
                      .++++|.|.+|       ++.|..+..|.+| ++.|+++
T Consensus         5 ~~~k~~~C~~C-------~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            5 SSGHLYYCSQC-------HYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             SSSCEEECSSS-------SCEEECHHHHHHHHHHHTCCC
T ss_pred             CCCcCeECCCC-------CcccCCHHHHHHHHHHHccCc
Confidence            38999999999       9999999999999 8999875

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.81  E-value=8.3e-06  Score=48.30  Aligned_cols=26  Identities=35%  Similarity=0.603  Sum_probs=24.6

Q ss_pred             CceecccccccccChHHHHHHHHhcC
Q 014855           81 NRFLCEICNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        81 k~~~C~~Cgk~F~~~~~L~~H~~~H~  106 (417)
                      ++|.|.+|++.|.....|..|+++|.
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~   26 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHS   26 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHH
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhc
Confidence            57999999999999999999999997

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.80  E-value=9.4e-06  Score=47.58  Aligned_cols=24  Identities=21%  Similarity=0.426  Sum_probs=12.5

Q ss_pred             CccccCcCCccccChhhHHHHHHH
Q 014855          157 KKWKCEKCSKKYAVQSDWKAHSKI  180 (417)
Q Consensus       157 kp~~C~~C~k~F~~~~~L~~H~~~  180 (417)
                      ++|.|.+||+.|.....|..|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~   25 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRT   25 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHH
T ss_pred             cCccCCCcChhhCCHHHHHHHHHH
Confidence            445555555555555555555443

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=97.78  E-value=1.6e-06  Score=53.63  Aligned_cols=30  Identities=13%  Similarity=0.265  Sum_probs=20.1

Q ss_pred             eeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCcc
Q 014855          123 VYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKW  159 (417)
Q Consensus       123 ~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~  159 (417)
                      +|.|.+|       ++.|.....|.+|+++|+++++|
T Consensus         2 p~~C~~C-------~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            2 AFACPAC-------PKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CSSSSSS-------CTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCC-------CcccCCHHHHHHHHHHHccCCCC
Confidence            5666666       66666666666666666666665

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.77  E-value=1.5e-05  Score=48.71  Aligned_cols=27  Identities=30%  Similarity=0.786  Sum_probs=25.3

Q ss_pred             CCceecc--cccccccChHHHHHHHHhcC
Q 014855           80 TNRFLCE--ICNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        80 ~k~~~C~--~Cgk~F~~~~~L~~H~~~H~  106 (417)
                      +++|.|.  .||+.|.....|.+|+++|.
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~   29 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQ   29 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGT
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHcc
Confidence            4689999  89999999999999999998

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.97  E-value=3.4e-06  Score=50.37  Aligned_cols=26  Identities=31%  Similarity=0.636  Sum_probs=24.6

Q ss_pred             CceecccccccccChHHHHHHHHhcC
Q 014855           81 NRFLCEICNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        81 k~~~C~~Cgk~F~~~~~L~~H~~~H~  106 (417)
                      ++|.|++||+.|.....|..|+++|.
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~   26 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHT   26 (29)
Confidence            57999999999999999999999997

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.75  E-value=1.7e-05  Score=47.19  Aligned_cols=23  Identities=30%  Similarity=0.580  Sum_probs=10.9

Q ss_pred             ccccCcCCccccChhhHHHHHHH
Q 014855          158 KWKCEKCSKKYAVQSDWKAHSKI  180 (417)
Q Consensus       158 p~~C~~C~k~F~~~~~L~~H~~~  180 (417)
                      +|.|.+|++.|.....|..|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~   24 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKT   24 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHH
T ss_pred             CccCCCCCCccCCHHHHHHHHHH
Confidence            34444444444444444444444

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=96.94  E-value=3.8e-06  Score=50.37  Aligned_cols=27  Identities=30%  Similarity=0.573  Sum_probs=25.2

Q ss_pred             CCceecccccccccChHHHHHHHHhcC
Q 014855           80 TNRFLCEICNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        80 ~k~~~C~~Cgk~F~~~~~L~~H~~~H~  106 (417)
                      +++|.|..||+.|.....|..|+++|.
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHT   27 (30)
Confidence            368999999999999999999999997

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.74  E-value=1.5e-05  Score=48.35  Aligned_cols=26  Identities=42%  Similarity=0.914  Sum_probs=24.5

Q ss_pred             Cceecc--cccccccChHHHHHHHHhcC
Q 014855           81 NRFLCE--ICNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        81 k~~~C~--~Cgk~F~~~~~L~~H~~~H~  106 (417)
                      ++|.|+  .||+.|.....|..|+++|.
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~   28 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHT   28 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTS
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhc
Confidence            579998  99999999999999999998

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.72  E-value=2.4e-05  Score=46.52  Aligned_cols=28  Identities=25%  Similarity=0.434  Sum_probs=17.8

Q ss_pred             ceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCC
Q 014855          122 KVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGE  156 (417)
Q Consensus       122 k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~e  156 (417)
                      ++|.|.+|       ++.|.....|..|+++|+++
T Consensus         2 k~~~C~~C-------~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            2 KPYQCDYC-------GRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCEECTTT-------CCEESCHHHHHHHHHTTCCC
T ss_pred             cCccCCCC-------CcccCCHHHHHHHHHHhccC
Confidence            45666666       66666666666666666654

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.72  E-value=1.5e-05  Score=46.43  Aligned_cols=25  Identities=28%  Similarity=0.743  Sum_probs=23.2

Q ss_pred             ceecccccccccChHHHHHHHHhcC
Q 014855           82 RFLCEICNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        82 ~~~C~~Cgk~F~~~~~L~~H~~~H~  106 (417)
                      +|+|.+||+.|.....|.+|+++|.
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~   25 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHK   25 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcC
Confidence            5899999999999999999999997

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.70  E-value=2.3e-05  Score=46.21  Aligned_cols=23  Identities=43%  Similarity=0.783  Sum_probs=10.7

Q ss_pred             ccccCcCCccccChhhHHHHHHH
Q 014855          158 KWKCEKCSKKYAVQSDWKAHSKI  180 (417)
Q Consensus       158 p~~C~~C~k~F~~~~~L~~H~~~  180 (417)
                      +|.|.+|++.|.....|..|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~   24 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKI   24 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHH
T ss_pred             CCcCCCCCcccCCHHHHHHHHHH
Confidence            34444444444444444444444

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.66  E-value=2.5e-05  Score=46.27  Aligned_cols=27  Identities=15%  Similarity=0.327  Sum_probs=16.7

Q ss_pred             eeeCCCCCccCCCCCCcccCHHHHHHHHhhccCC
Q 014855          123 VYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGE  156 (417)
Q Consensus       123 ~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~e  156 (417)
                      +|.|.+|       ++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C-------~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            2 KFACPEC-------PKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CEECSSS-------SCEESCSHHHHHHHTGGGSC
T ss_pred             CccCCCC-------CchhCCHHHHHHHHHHhcCC
Confidence            4666666       66666666666666666554

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.65  E-value=3.3e-05  Score=45.64  Aligned_cols=20  Identities=25%  Similarity=0.524  Sum_probs=10.9

Q ss_pred             CCcccCHHHHHHHHhhccCC
Q 014855          137 SRALGDLTGIKKHFSRKHGE  156 (417)
Q Consensus       137 ~k~f~~~~~L~~H~~~H~~e  156 (417)
                      ++.|.....|..|+++|+++
T Consensus         9 ~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            9 TRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCSSHHHHHHHHHHHSCC
T ss_pred             CcccCCHHHHHHHHHHhcCC
Confidence            55555555555555555544

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.63  E-value=2.2e-05  Score=46.93  Aligned_cols=26  Identities=31%  Similarity=0.742  Sum_probs=24.1

Q ss_pred             CceecccccccccChHHHHHH-HHhcC
Q 014855           81 NRFLCEICNKGFQRDQNLQLH-RRGHN  106 (417)
Q Consensus        81 k~~~C~~Cgk~F~~~~~L~~H-~~~H~  106 (417)
                      ++|.|..||+.|.....|..| +++|.
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~   27 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHS   27 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHcc
Confidence            479999999999999999999 78887

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.60  E-value=6.6e-06  Score=55.69  Aligned_cols=32  Identities=13%  Similarity=0.294  Sum_probs=29.1

Q ss_pred             cCCceeeCC--CCCccCCCCCCcccCHHHHHHHHhhccCCC
Q 014855          119 ERKKVYVCP--EPTCVHHDPSRALGDLTGIKKHFSRKHGEK  157 (417)
Q Consensus       119 ~~~k~~~C~--~C~C~~~~~~k~f~~~~~L~~H~~~H~~ek  157 (417)
                      .++++|.|.  .|       ++.|.....|.+|+++|+++|
T Consensus        14 ~~~k~~~C~~~~C-------~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A           14 MPDKTFECLFPGC-------TKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             ETTTEEECCCTTC-------CCEECSSSSHHHHHHHHTTTC
T ss_pred             CCCCCeECCCCCC-------CCccCCHHHHHHHHHHccCCC
Confidence            389999996  68       999999999999999999875

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.60  E-value=4.3e-05  Score=46.21  Aligned_cols=28  Identities=18%  Similarity=0.405  Sum_probs=18.0

Q ss_pred             eeeCC--CCCccCCCCCCcccCHHHHHHHHhhccCCC
Q 014855          123 VYVCP--EPTCVHHDPSRALGDLTGIKKHFSRKHGEK  157 (417)
Q Consensus       123 ~~~C~--~C~C~~~~~~k~f~~~~~L~~H~~~H~~ek  157 (417)
                      +|.|.  .|       ++.|.....|..|+++|++++
T Consensus         2 p~~C~~~~C-------~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            2 PFMCTWSYC-------GKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCBCCSTTC-------CCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCcCCCC-------CcccCCHhHHHHHHHHhcCCC
Confidence            56665  55       666666666666666666653

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.59  E-value=4.2e-05  Score=46.56  Aligned_cols=20  Identities=10%  Similarity=0.152  Sum_probs=10.8

Q ss_pred             CCcccCHHHHHHHHhhccCC
Q 014855          137 SRALGDLTGIKKHFSRKHGE  156 (417)
Q Consensus       137 ~k~f~~~~~L~~H~~~H~~e  156 (417)
                      ++.|.....|.+|+++|+++
T Consensus        12 ~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A           12 DKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCCBSSSHHHHHHHGGGTCC
T ss_pred             CCccCCHHHHHHHHHHccCC
Confidence            55555555555555555544

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.59  E-value=3.7e-05  Score=45.36  Aligned_cols=27  Identities=22%  Similarity=0.412  Sum_probs=15.0

Q ss_pred             eeeCCCCCccCCCCCCcccCHHHHHHHHhhccCC
Q 014855          123 VYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGE  156 (417)
Q Consensus       123 ~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~e  156 (417)
                      +|.|.+|       ++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C-------~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            2 PLKCREC-------GKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CEECTTT-------SCEESCHHHHHHHHHHHHTC
T ss_pred             CccCCCC-------CCccCChhHHHHHHHHhcCC
Confidence            4555555       55555555555555555544

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.74  E-value=9.7e-06  Score=47.06  Aligned_cols=23  Identities=30%  Similarity=0.727  Sum_probs=11.2

Q ss_pred             ceeec-CCCccCCchHHHHHHhhc
Q 014855          185 EYKCD-CGKLFSRRDSFITHRAFC  207 (417)
Q Consensus       185 p~~C~-C~k~F~~~~~L~~H~~~h  207 (417)
                      ||.|. ||+.|..+..|..|++.|
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            44454 555555555555554443

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.57  E-value=0.0001  Score=53.67  Aligned_cols=49  Identities=10%  Similarity=0.205  Sum_probs=34.0

Q ss_pred             cCCCCCCcccCHHHHHHHH-hhccCCC------ccccC--cCCccccChhhHHHHHHH
Q 014855          132 VHHDPSRALGDLTGIKKHF-SRKHGEK------KWKCE--KCSKKYAVQSDWKAHSKI  180 (417)
Q Consensus       132 ~~~~~~k~f~~~~~L~~H~-~~H~~ek------p~~C~--~C~k~F~~~~~L~~H~~~  180 (417)
                      .|.+|++.|.+...|..|+ +.|.+.+      .|.|.  .|++.+.....|..|+++
T Consensus         5 ~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~   62 (64)
T 1zw8_A            5 KWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINA   62 (64)
T ss_dssp             CCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHH
T ss_pred             eeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccc
Confidence            3444588888888888887 4677654      56674  677766666667777665

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.52  E-value=4.9e-05  Score=44.84  Aligned_cols=26  Identities=23%  Similarity=0.668  Sum_probs=24.4

Q ss_pred             Cceecc--cccccccChHHHHHHHHhcC
Q 014855           81 NRFLCE--ICNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        81 k~~~C~--~Cgk~F~~~~~L~~H~~~H~  106 (417)
                      ++|.|.  .||+.|.....|..|+++|.
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            479999  99999999999999999986

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.51  E-value=4e-05  Score=45.09  Aligned_cols=29  Identities=17%  Similarity=0.378  Sum_probs=26.6

Q ss_pred             ceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCC
Q 014855          122 KVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEK  157 (417)
Q Consensus       122 k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ek  157 (417)
                      ++|.|.+|       ++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C-------~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHC-------DKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSC-------CCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCC-------CcccCCHHHHHHHHHHhccCC
Confidence            47999999       999999999999999999874

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.48  E-value=6.8e-05  Score=44.00  Aligned_cols=26  Identities=12%  Similarity=0.323  Sum_probs=13.6

Q ss_pred             ceeeCCCCCccCCCCCCcccCHHHHHHHHhhcc
Q 014855          122 KVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKH  154 (417)
Q Consensus       122 k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~  154 (417)
                      ++|.|.+|       ++.|.....|..|+++|+
T Consensus         2 k~~~C~~C-------~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            2 RPYSCSVC-------GKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CSEECSSS-------CCEESCHHHHHHHHTTSC
T ss_pred             cCccCCCC-------CcccCCHHHHHHHHHhcC
Confidence            34555555       555555555555555544

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.58  E-value=1.9e-05  Score=46.99  Aligned_cols=20  Identities=20%  Similarity=0.438  Sum_probs=10.4

Q ss_pred             CCcccCHHHHHHHHhhccCC
Q 014855          137 SRALGDLTGIKKHFSRKHGE  156 (417)
Q Consensus       137 ~k~f~~~~~L~~H~~~H~~e  156 (417)
                      ++.|.....|..|+++|+++
T Consensus         9 ~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            9 GKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            55555555555555555443

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=96.54  E-value=2.1e-05  Score=46.90  Aligned_cols=24  Identities=25%  Similarity=0.649  Sum_probs=11.5

Q ss_pred             CccccCcCCccccChhhHHHHHHH
Q 014855          157 KKWKCEKCSKKYAVQSDWKAHSKI  180 (417)
Q Consensus       157 kp~~C~~C~k~F~~~~~L~~H~~~  180 (417)
                      ++|.|.+||+.|.....|..|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~   25 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRI   25 (30)
Confidence            344444444444444444444444

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.40  E-value=0.0001  Score=42.76  Aligned_cols=25  Identities=16%  Similarity=0.345  Sum_probs=15.3

Q ss_pred             eeCCCCCccCCCCCCcccCHHHHHHHHhhccC
Q 014855          124 YVCPEPTCVHHDPSRALGDLTGIKKHFSRKHG  155 (417)
Q Consensus       124 ~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~  155 (417)
                      |.|.+|       ++.|.....|.+|+++|++
T Consensus         2 ~~C~~C-------~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            2 YKCGLC-------ERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             CBCSSS-------CCBCSSHHHHHHHGGGTCC
T ss_pred             ccCCCC-------CCcCCCHHHHHHHHHHcCC
Confidence            556665       6666666666666666654

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.34  E-value=0.0001  Score=43.87  Aligned_cols=27  Identities=22%  Similarity=0.327  Sum_probs=15.1

Q ss_pred             eeeCCCCCccCCCCCCcccCHHHHHHH-HhhccCC
Q 014855          123 VYVCPEPTCVHHDPSRALGDLTGIKKH-FSRKHGE  156 (417)
Q Consensus       123 ~~~C~~C~C~~~~~~k~f~~~~~L~~H-~~~H~~e  156 (417)
                      +|.|..|       ++.|.....|..| +++|+++
T Consensus         2 ~~~C~~C-------~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            2 AYACGLC-------NRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CSBCTTT-------CCBCSSSHHHHHHHTTTSCCC
T ss_pred             CcCCccc-------CcccCChHHHHHHHHHHccCC
Confidence            4555555       5555555555555 4555554

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=96.93  E-value=0.00043  Score=40.54  Aligned_cols=23  Identities=22%  Similarity=0.647  Sum_probs=11.0

Q ss_pred             ccccC--cCCccccChhhHHHHHHH
Q 014855          158 KWKCE--KCSKKYAVQSDWKAHSKI  180 (417)
Q Consensus       158 p~~C~--~C~k~F~~~~~L~~H~~~  180 (417)
                      +|.|.  .|++.|.....|..|+++
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~   26 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKI   26 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGG
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHH
Confidence            34444  444444444444444444

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=96.87  E-value=0.0017  Score=47.15  Aligned_cols=60  Identities=20%  Similarity=0.262  Sum_probs=43.3

Q ss_pred             eecc--cccccccChHHHHHHH-HhcCCCcccccccccccCCceeeCCCCCccCCCCCCcccCHHHHHHHHhhcc
Q 014855           83 FLCE--ICNKGFQRDQNLQLHR-RGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKH  154 (417)
Q Consensus        83 ~~C~--~Cgk~F~~~~~L~~H~-~~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~  154 (417)
                      |.|.  .|++.|.+...|..|+ +.|.+..       .......|.|..=+|     ++.+.....|..|++.++
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~-------~~~~~~~~~C~W~~C-----~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQD-------FKHPMEPLACNWEDC-----DFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCC-------CCCSSCCEECCCSSC-----CCEESSHHHHHHHHHHHC
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCcc-------cCCCCCCCEeeCCCC-----cCCCCChHHHHhhccccC
Confidence            4454  4999999999999998 5786210       000123788875555     999999999999998754

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.62  E-value=0.0005  Score=57.23  Aligned_cols=84  Identities=12%  Similarity=0.192  Sum_probs=51.0

Q ss_pred             CCceecccccccccChHHHHHHH--HhcCCCcccccccccccCCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCC
Q 014855           80 TNRFLCEICNKGFQRDQNLQLHR--RGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEK  157 (417)
Q Consensus        80 ~k~~~C~~Cgk~F~~~~~L~~H~--~~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ek  157 (417)
                      .+++.|.+|+..|.+...+..|.  +.|..            ..+.|.+. ++....-.++.|...    .+...+.+.+
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~------------~v~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~   92 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKHAN------------KVRRYMAI-NQGEDSVPAKKFKAA----PAEISDGEDR   92 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHHHH------------HHHHHHHH-TTCCCCCSCCCCSCC----SSCCSSCCCT
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHHHH------------HHHHHhcc-cCcccCCCCCccCCC----ccccccCCCC
Confidence            45799999999999999999998  55641            01222221 100000002233211    1223455667


Q ss_pred             ccccCcCCccccChhhHHHHHHH
Q 014855          158 KWKCEKCSKKYAVQSDWKAHSKI  180 (417)
Q Consensus       158 p~~C~~C~k~F~~~~~L~~H~~~  180 (417)
                      .|-|.+|++.|.....|..|...
T Consensus        93 ~~~C~~C~~~f~s~~~~~~H~~g  115 (127)
T 1zu1_A           93 SKCCPVCNMTFSSPVVAESHYIG  115 (127)
T ss_dssp             TTEETTTTEECSSHHHHHHHHTS
T ss_pred             CeEcCCCCCEeCCHHHHHHHHCC
Confidence            78888888888888888888754

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.83  E-value=0.0017  Score=53.43  Aligned_cols=30  Identities=17%  Similarity=0.395  Sum_probs=23.7

Q ss_pred             hhccCCCccccCcCCccccChhhHHHHHHH
Q 014855          151 SRKHGEKKWKCEKCSKKYAVQSDWKAHSKI  180 (417)
Q Consensus       151 ~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~  180 (417)
                      ..|+|+++|.|..|+|.|.+...|..|+++
T Consensus        43 ed~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           43 PDLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             ccCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            457778888888888888888888888765

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=95.66  E-value=0.035  Score=48.04  Aligned_cols=81  Identities=19%  Similarity=0.435  Sum_probs=59.9

Q ss_pred             CceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCceeec-CCCccCCch
Q 014855          121 KKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD-CGKLFSRRD  198 (417)
Q Consensus       121 ~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~-C~k~F~~~~  198 (417)
                      +....|+.-||     +..+. ...|..|.+ .=.-++..|+.|+..+ .+..|..|+.. ...+.-.|. |+..|..+ 
T Consensus        80 ~l~v~C~n~GC-----~~~~~-~~~l~~H~~-~C~~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~~~-  150 (170)
T 3hcs_A           80 SLMVKCPNEGC-----LHKME-LRHLEDHQA-HCEFALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMAFE-  150 (170)
T ss_dssp             TSEEECCSTTC-----CCEEE-GGGHHHHHT-TCTTSEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEEGG-
T ss_pred             hcccCCCCCCC-----Cceec-HhHHHHHHh-cCCceeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccCHH-
Confidence            34567865455     66543 556888873 3345778999999988 67789999976 888999999 99988665 


Q ss_pred             HHHHHHhhcccc
Q 014855          199 SFITHRAFCDVL  210 (417)
Q Consensus       199 ~L~~H~~~h~~~  210 (417)
                      .|..|...+...
T Consensus       151 ~l~~H~~~~~~~  162 (170)
T 3hcs_A          151 DKEIHDQNCPLA  162 (170)
T ss_dssp             GHHHHHTTCCC-
T ss_pred             HHHhHHHhCcCh
Confidence            779999887543

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.55  E-value=0.0038  Score=51.30  Aligned_cols=32  Identities=25%  Similarity=0.373  Sum_probs=28.5

Q ss_pred             ccccCCCCceecccccccccChHHHHHHHHhc
Q 014855           74 PKSLMATNRFLCEICNKGFQRDQNLQLHRRGH  105 (417)
Q Consensus        74 ~~~~~~~k~~~C~~Cgk~F~~~~~L~~H~~~H  105 (417)
                      ...++++++|.|..|++.|.+...|..|+++.
T Consensus        42 ded~tGekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           42 DPDLPGGGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             CSSSGGGGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             cccCCCCcceEcccCcchhCCHHHHHHHHhhh
Confidence            45678899999999999999999999998764

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.16  E-value=0.014  Score=38.87  Aligned_cols=24  Identities=17%  Similarity=0.482  Sum_probs=14.8

Q ss_pred             CccccCcCCccccChhhHHHHHHH
Q 014855          157 KKWKCEKCSKKYAVQSDWKAHSKI  180 (417)
Q Consensus       157 kp~~C~~C~k~F~~~~~L~~H~~~  180 (417)
                      ..|.|+.|++.|...+.|+.||+.
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmky   34 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCY   34 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhh
Confidence            345666666666666666666665

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=94.56  E-value=0.022  Score=47.11  Aligned_cols=75  Identities=16%  Similarity=0.156  Sum_probs=51.5

Q ss_pred             CceeeCCCCCccCCCCCCcccCHHHHHHHH--hhccCC-CccccCcC------CccccChhhHHHHHHH-hCCCceeec-
Q 014855          121 KKVYVCPEPTCVHHDPSRALGDLTGIKKHF--SRKHGE-KKWKCEKC------SKKYAVQSDWKAHSKI-CGTREYKCD-  189 (417)
Q Consensus       121 ~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~--~~H~~e-kp~~C~~C------~k~F~~~~~L~~H~~~-~~ekp~~C~-  189 (417)
                      .+++.|..|       ...|.+...+..|.  +.|... +.|.+..+      ++.|....    +... .+.+.|.|. 
T Consensus        30 ~~~~~C~~C-------~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~C~~   98 (127)
T 1zu1_A           30 FSDTQCKVC-------SAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAP----AEISDGEDRSKCCPV   98 (127)
T ss_dssp             BCSSEETTT-------TEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCS----SCCSSCCCTTTEETT
T ss_pred             CCCCcCcCC-------CCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCc----cccccCCCCCeEcCC
Confidence            467899999       89999999999998  556532 44444211      23332211    1112 456789999 


Q ss_pred             CCCccCCchHHHHHHhh
Q 014855          190 CGKLFSRRDSFITHRAF  206 (417)
Q Consensus       190 C~k~F~~~~~L~~H~~~  206 (417)
                      |.+.|.....|..|...
T Consensus        99 C~~~f~s~~~~~~H~~g  115 (127)
T 1zu1_A           99 CNMTFSSPVVAESHYIG  115 (127)
T ss_dssp             TTEECSSHHHHHHHHTS
T ss_pred             CCCEeCCHHHHHHHHCC
Confidence            99999999999999753

>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}

Probab=94.40  E-value=0.0045  Score=66.41  Aligned_cols=9  Identities=33%  Similarity=0.431  Sum_probs=3.9

Q ss_pred             hHHHHHHHH
Q 014855          335 TALLQKAAQ  343 (417)
Q Consensus       335 tallqkaa~  343 (417)
                      .+|++-..+
T Consensus       135 ~~l~~~~~~  143 (727)
T 4b8c_D          135 QALMEMADT  143 (727)
T ss_dssp             HHHHHHHHH
T ss_pred             hhhhhhhhh
Confidence            345544333

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=93.75  E-value=0.032  Score=37.24  Aligned_cols=24  Identities=29%  Similarity=0.476  Sum_probs=22.2

Q ss_pred             CceecccccccccChHHHHHHHHh
Q 014855           81 NRFLCEICNKGFQRDQNLQLHRRG  104 (417)
Q Consensus        81 k~~~C~~Cgk~F~~~~~L~~H~~~  104 (417)
                      .+|.|+.|++.|.....|+.||+-
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmky   34 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCY   34 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhh
Confidence            579999999999999999999973

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=92.10  E-value=0.2  Score=43.22  Aligned_cols=57  Identities=19%  Similarity=0.317  Sum_probs=43.5

Q ss_pred             CceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccCcCCccccChhhHHHHHHH-hCCCce
Q 014855          121 KKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGTREY  186 (417)
Q Consensus       121 ~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~ekp~  186 (417)
                      -++..|+.|       +..+ .+..|..|+...-..+...|..|+..|.. ..|..|..+ .|+.++
T Consensus       108 ~~~v~C~~C-------~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~~-~~l~~H~~~~~~~~~~  165 (170)
T 3hcs_A          108 FALMDCPQC-------QRPF-QKFHINIHILKDCPRRQVSCDNCAASMAF-EDKEIHDQNCPLALEH  165 (170)
T ss_dssp             TSEEECTTT-------CCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEEG-GGHHHHHTTCCC----
T ss_pred             ceeeECCCC-------ChHH-HHHHHHHHhhhhCCCCCeECCCCCCccCH-HHHHhHHHhCcChhhh
Confidence            467789877       7777 56779999988888899999999998854 677999988 777654

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=83.52  E-value=0.27  Score=36.61  Aligned_cols=43  Identities=23%  Similarity=0.521  Sum_probs=25.1

Q ss_pred             cccCcCCccccChhhHHHHHHH-hCCCceeec-CCCccCCchHHHHH
Q 014855          159 WKCEKCSKKYAVQSDWKAHSKI-CGTREYKCD-CGKLFSRRDSFITH  203 (417)
Q Consensus       159 ~~C~~C~k~F~~~~~L~~H~~~-~~ekp~~C~-C~k~F~~~~~L~~H  203 (417)
                      |.|+.||..++ +..|..|+.. .+-..|.|. |++.|.. ..++.|
T Consensus        11 F~C~~Cgd~lK-K~kv~~H~~~Cr~~~~~SCIDC~~~F~~-~~y~~H   55 (79)
T 1wjv_A           11 FTCNACGESVK-KIQVEKHVSNCRNCECLSCIDCGKDFWG-DDYKSH   55 (79)
T ss_dssp             EEESSSCCEEE-TTHHHHHHHHCTTCCEEEETTTTEEEEG-GGTTTC
T ss_pred             EEcCCCCCeee-cccchhHHhhCCCCCcEEecccCCeeCC-CCEeCE
Confidence            66777775543 4456667655 333567776 7777764 334444

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=82.82  E-value=0.79  Score=28.44  Aligned_cols=24  Identities=25%  Similarity=0.494  Sum_probs=21.2

Q ss_pred             ceecccccccccChHHHHHHHHhc
Q 014855           82 RFLCEICNKGFQRDQNLQLHRRGH  105 (417)
Q Consensus        82 ~~~C~~Cgk~F~~~~~L~~H~~~H  105 (417)
                      .|.|++|.+.|.+...|..|....
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~   28 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAV   28 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHH
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhc
Confidence            499999999999999999996543

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=82.60  E-value=1.1  Score=27.97  Aligned_cols=24  Identities=21%  Similarity=0.463  Sum_probs=14.6

Q ss_pred             CccccCcCCccccChhhHHHHHHH
Q 014855          157 KKWKCEKCSKKYAVQSDWKAHSKI  180 (417)
Q Consensus       157 kp~~C~~C~k~F~~~~~L~~H~~~  180 (417)
                      .++.|..|+-+|.....+..|.+.
T Consensus         7 ~~~~C~~C~IsF~~l~ty~aHKk~   30 (36)
T 1fu9_A            7 MKKYCSTCDISFNYVKTYLAHKQF   30 (36)
T ss_dssp             CCSEETTTTEECSSHHHHHHHHHH
T ss_pred             CcCeeccccceehhhHHHhhhhee
Confidence            345566666666666666666554

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}

Probab=82.60  E-value=0.12  Score=38.18  Aligned_cols=50  Identities=32%  Similarity=0.757  Sum_probs=32.5

Q ss_pred             Ccccc-CcCCccccChhhHHHHHHH-hCCCceeec-CCCccCCchHHHHHHhhcc
Q 014855          157 KKWKC-EKCSKKYAVQSDWKAHSKI-CGTREYKCD-CGKLFSRRDSFITHRAFCD  208 (417)
Q Consensus       157 kp~~C-~~C~k~F~~~~~L~~H~~~-~~ekp~~C~-C~k~F~~~~~L~~H~~~h~  208 (417)
                      .+..| ..|+..+. +..|..|+.. ...++..|. |+..|... .|..|...+.
T Consensus        15 ~~v~C~~~C~~~v~-r~~l~~H~~~~C~~r~v~C~~C~~~~~~~-~l~~H~~~Cp   67 (76)
T 2yuc_A           15 NVIPCPNRCPMKLS-RRDLPAHLQHDCPKRRLKCEFCGCDFSGE-AYESHEGMCP   67 (76)
T ss_dssp             SCCBCTTCCSCBCC-SSSSTTTTTTSCTTSCCCCSSSCCCCCHH-HHHHTTTSCT
T ss_pred             cccCCCccccHHhh-HhHHHhhCHhhCCCcceECCCCCCccCHH-HHHHHHhHCC
Confidence            45567 46777664 3567777764 666777787 88777654 5677765543

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=82.17  E-value=0.93  Score=34.48  Aligned_cols=26  Identities=23%  Similarity=0.598  Sum_probs=21.3

Q ss_pred             CCCCceecccccccccChHHHHHHHHhcC
Q 014855           78 MATNRFLCEICNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        78 ~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~  106 (417)
                      ...+...|-+|||.|.   .|++|.++|+
T Consensus        17 i~~d~iiClecGK~fK---~LkRHL~~~h   42 (87)
T 2jsp_A           17 VQDDHIVCLECGGSFK---SLKRHLTTHH   42 (87)
T ss_dssp             BCSSCEECTBTCCEES---BHHHHHHHTT
T ss_pred             cCCCceEecccchhhH---HHHHHHHHcc
Confidence            3455689999999998   4889999965

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=81.60  E-value=1.2  Score=27.84  Aligned_cols=26  Identities=15%  Similarity=0.354  Sum_probs=22.4

Q ss_pred             CCCceecccccccccChHHHHHHHHh
Q 014855           79 ATNRFLCEICNKGFQRDQNLQLHRRG  104 (417)
Q Consensus        79 ~~k~~~C~~Cgk~F~~~~~L~~H~~~  104 (417)
                      ....+.|..|+..|.....+..|++-
T Consensus         5 ~~~~~~C~~C~IsF~~l~ty~aHKk~   30 (36)
T 1fu9_A            5 EVMKKYCSTCDISFNYVKTYLAHKQF   30 (36)
T ss_dssp             CCCCSEETTTTEECSSHHHHHHHHHH
T ss_pred             ccCcCeeccccceehhhHHHhhhhee
Confidence            34568999999999999999999763

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	417
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	7e-04

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (81), Expect = 7e-04
 Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 3/51 (5%)

Query: 156 EKKWKCEKCSKKYAVQSDWKAHSKICGT-REYKCD-CGKLFSRRDSFITHR 204
           +K + C+ C K +  +S    H  +    R Y C  CGK F  +   + H 
Sbjct: 1   DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHM 50

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	417
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.5
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.45
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.02
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.01
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.96
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.96
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.95
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.93
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.88
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.81
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.81
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.78
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.77
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	98.75
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.74
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.73
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.71
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.68
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.65
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.63
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.63
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.61
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.6
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.56
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.49
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.49
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.49
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.43
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.42
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.35
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.35
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.33
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.31
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.2
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.17
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.16
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.14
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.12
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.11
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.08
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.04
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.03
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.93
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.85
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.76
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.54
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.48
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.41
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.39
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.31
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.3
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.29
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.29
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.18
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.18
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.05
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.02
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.97
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	96.92
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.81
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.81
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.8
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.7
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	96.67
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.67
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.65
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.64
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.62
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.58
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.55
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.55
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.45
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.42
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.39
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.28
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.21
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.21
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.01
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	95.87
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.85
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.65
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.51
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	95.36
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	95.3
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.26
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.12
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.11
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	95.06
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	94.66
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	94.62
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	94.6
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	94.19
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	93.89
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	93.82
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	93.22
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	93.13
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	93.08
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	92.82
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	91.62
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	89.9
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	89.58
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	88.88
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	88.84
d1y0jb1	36	U-shaped transcription factor, different fingers {	87.88
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	87.8
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	87.66
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	85.8
d1y0jb1	36	U-shaped transcription factor, different fingers {	85.23
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	84.59
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	83.7
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	83.65
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	82.93
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	81.72
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	81.51
d2czra1	218	TBP-interacting protein {Thermococcus kodakaraensi	81.08
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	80.79

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=6.2e-15  Score=103.10  Aligned_cols=44  Identities=23%  Similarity=0.498  Sum_probs=25.2

Q ss_pred             CCcccCHHHHHHHHhhccCCCccccCcCCccccChhhHHHHHHH
Q 014855          137 SRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI  180 (417)
Q Consensus       137 ~k~f~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~  180 (417)
                      |+.|.....|..|+++|+|++||.|.+||++|.....|..|+++
T Consensus         9 gk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~   52 (53)
T d2csha1           9 GKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKI   52 (53)
T ss_dssp             SCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTT
T ss_pred             CCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhc
Confidence            55555555555555555555555555555555555555555543

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=2.7e-14  Score=99.72  Aligned_cols=53  Identities=17%  Similarity=0.310  Sum_probs=51.0

Q ss_pred             CCceecccccccccChHHHHHHHHhcCCCcccccccccccCCceeeCCCCCccCCCCCCcccCHHHHHHHHhhc
Q 014855           80 TNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRK  153 (417)
Q Consensus        80 ~k~~~C~~Cgk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H  153 (417)
                      +|+|+|+ ||+.|..+..|.+|+++|.             ++++|.|.+|       ++.|.....|.+|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht-------------~ekpy~C~~C-------~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHL-------------GLRPYGCGVC-------GKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHS-------------CCCSEECTTT-------SCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccc-------------cccCCcCCCc-------CCEecCHHHHHHHHhcC
Confidence            5899995 9999999999999999999             9999999999       99999999999999987

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=8e-11  Score=75.50  Aligned_cols=37  Identities=27%  Similarity=0.635  Sum_probs=33.8

Q ss_pred             CCCceecccccccccChHHHHHHHH-hcCCCcccccccccccCCceeeCCC
Q 014855           79 ATNRFLCEICNKGFQRDQNLQLHRR-GHNLPWKLKQRTNKVERKKVYVCPE  128 (417)
Q Consensus        79 ~~k~~~C~~Cgk~F~~~~~L~~H~~-~H~~p~~~~~~~~~~~~~k~~~C~~  128 (417)
                      .+|+|+|++|||.|....+|++|++ +|+             ++|||.|++
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht-------------~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHT-------------SERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSC-------------CCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccC-------------CCcCcCCcC
Confidence            4789999999999999999999976 798             999999974

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.01  E-value=2.9e-11  Score=77.56  Aligned_cols=36  Identities=22%  Similarity=0.612  Sum_probs=30.6

Q ss_pred             HHHhhccCCCccccCcCCccccChhhHHHHHHH-hCC
Q 014855          148 KHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGT  183 (417)
Q Consensus       148 ~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~e  183 (417)
                      +|+++|+++|||+|++|||+|...++|.+|+++ +||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            578888889999999999999988888888888 664

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.96  E-value=1.6e-10  Score=73.05  Aligned_cols=32  Identities=25%  Similarity=0.479  Sum_probs=26.6

Q ss_pred             hhccCCCccccCcCCccccChhhHHHHHHHhC
Q 014855          151 SRKHGEKKWKCEKCSKKYAVQSDWKAHSKICG  182 (417)
Q Consensus       151 ~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~~~  182 (417)
                      |+|+|||||+|.+|||+|..++.|+.|+++|.
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~   32 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYH   32 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTT
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccC
Confidence            57888888888888888888888888888843

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.96  E-value=1.9e-10  Score=73.67  Aligned_cols=37  Identities=19%  Similarity=0.429  Sum_probs=30.2

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHh-hccCCCccccCc
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFS-RKHGEKKWKCEK  163 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~-~H~~ekp~~C~~  163 (417)
                      .+|||.|.+|       ++.|....+|++|++ +|+|||||+|++
T Consensus         2 ~~Kpy~C~~C-------gk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSC-------GKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSS-------CCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCCC-------CCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            3678888888       888888888888875 688888888864

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.95  E-value=9.9e-11  Score=74.52  Aligned_cols=33  Identities=18%  Similarity=0.429  Sum_probs=28.1

Q ss_pred             HHhhccCCCccccCcCCccccChhhHHHHHHHh
Q 014855          149 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKIC  181 (417)
Q Consensus       149 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~~  181 (417)
                      |.|+|+|||||+|.+|+|+|.++++|++|+++|
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H   34 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH   34 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGG
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcC
Confidence            678888888888888888888888888888774

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=2.3e-10  Score=70.43  Aligned_cols=32  Identities=28%  Similarity=0.599  Sum_probs=21.9

Q ss_pred             hccCCCccccCcCCccccChhhHHHHHHH-hCC
Q 014855          152 RKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGT  183 (417)
Q Consensus       152 ~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~e  183 (417)
                      +|+|||||+|.+|||+|..++.|..|+++ +||
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            46677777777777777777777777776 443

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.88  E-value=3.7e-10  Score=71.18  Aligned_cols=33  Identities=21%  Similarity=0.429  Sum_probs=27.0

Q ss_pred             hhccCCCccccCcCCccccChhhHHHHHHH-hCC
Q 014855          151 SRKHGEKKWKCEKCSKKYAVQSDWKAHSKI-CGT  183 (417)
Q Consensus       151 ~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~~e  183 (417)
                      |+|+|||||+|++|+++|.++++|++|++. |++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            578888888888888888888888888766 554

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.81  E-value=1.2e-09  Score=67.14  Aligned_cols=31  Identities=29%  Similarity=0.479  Sum_probs=29.7

Q ss_pred             ccCCCCceecccccccccChHHHHHHHHhcC
Q 014855           76 SLMATNRFLCEICNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        76 ~~~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~  106 (417)
                      .|+++|||+|.+|||.|..+.+|.+|+++|+
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~Ht   31 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHT   31 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGG
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccC
Confidence            3789999999999999999999999999998

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.81  E-value=9e-10  Score=68.68  Aligned_cols=28  Identities=18%  Similarity=0.587  Sum_probs=16.2

Q ss_pred             ccCCCccccCcCCccccChhhHHHHHHH
Q 014855          153 KHGEKKWKCEKCSKKYAVQSDWKAHSKI  180 (417)
Q Consensus       153 H~~ekp~~C~~C~k~F~~~~~L~~H~~~  180 (417)
                      |+|||||+|.+|+|.|.++.+|++|+++
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~   29 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKV   29 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGG
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccc
Confidence            4555555555555555555555555555

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.78  E-value=1.7e-09  Score=67.41  Aligned_cols=30  Identities=27%  Similarity=0.523  Sum_probs=29.0

Q ss_pred             cCCCCceecccccccccChHHHHHHHHhcC
Q 014855           77 LMATNRFLCEICNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        77 ~~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~  106 (417)
                      ++++|||+|++|+|.|..+.+|++|+++|.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht   31 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHT   31 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGT
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccC
Confidence            689999999999999999999999999997

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.77  E-value=2.2e-09  Score=67.66  Aligned_cols=32  Identities=22%  Similarity=0.549  Sum_probs=30.6

Q ss_pred             cccCCCCceecccccccccChHHHHHHHHhcC
Q 014855           75 KSLMATNRFLCEICNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        75 ~~~~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~  106 (417)
                      +.|+++|||+|++||+.|..+.+|.+|+++|+
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~   32 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYH   32 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTT
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccC
Confidence            46899999999999999999999999999998

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.75  E-value=8.6e-10  Score=70.51  Aligned_cols=30  Identities=23%  Similarity=0.520  Sum_probs=29.3

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGE  156 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~e  156 (417)
                      ++|||.|++|       +|+|...+.|.+|+++|+||
T Consensus         9 ~ekpy~C~~C-------gK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           9 ERRRYKCDEC-------GKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CSCSSBCSSS-------CCBCSCHHHHHHHHTTTCCS
T ss_pred             CCCCEecCCC-------CceeeCHHHHHHhCccCCCC
Confidence            9999999999       99999999999999999997

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.74  E-value=1.7e-09  Score=63.81  Aligned_cols=27  Identities=37%  Similarity=0.796  Sum_probs=26.0

Q ss_pred             CCceecccccccccChHHHHHHHHhcC
Q 014855           80 TNRFLCEICNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        80 ~k~~~C~~Cgk~F~~~~~L~~H~~~H~  106 (417)
                      ||||+|.+|+|.|..+.+|.+|+|+|+
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HT   27 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHT   27 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHH
T ss_pred             CcCccCCCCcCEecccccccccCCCcc
Confidence            689999999999999999999999997

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.73  E-value=3.1e-09  Score=67.36  Aligned_cols=34  Identities=32%  Similarity=0.690  Sum_probs=32.1

Q ss_pred             CccccCCCCceecccccccccChHHHHHHHHhcC
Q 014855           73 SPKSLMATNRFLCEICNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        73 ~~~~~~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~  106 (417)
                      +.+.|+++|||+|.+|++.|..+.+|.+|+++|.
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCc
Confidence            4678999999999999999999999999999996

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.71  E-value=3.4e-09  Score=66.52  Aligned_cols=34  Identities=26%  Similarity=0.770  Sum_probs=29.8

Q ss_pred             eeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccccC
Q 014855          124 YVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCE  162 (417)
Q Consensus       124 ~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~C~  162 (417)
                      |.|++.+|     ++.|..+..|++|+++|+|+|||+|+
T Consensus         2 f~C~~~~C-----~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPAC-----GKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTT-----CCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCC-----CCeeCChhHhccccCeeCCCCCEeCC
Confidence            67877555     99999999999999999999999996

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.68  E-value=4.2e-09  Score=62.79  Aligned_cols=26  Identities=38%  Similarity=0.982  Sum_probs=25.3

Q ss_pred             CceecccccccccChHHHHHHHHhcC
Q 014855           81 NRFLCEICNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        81 k~~~C~~Cgk~F~~~~~L~~H~~~H~  106 (417)
                      |||.|++||+.|....+|++|+++|+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HT   26 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHT   26 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTT
T ss_pred             CcCCCCCCCCCCCCchHcccccCccc
Confidence            68999999999999999999999998

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.65  E-value=4.1e-09  Score=60.61  Aligned_cols=26  Identities=31%  Similarity=0.632  Sum_probs=24.7

Q ss_pred             CceecccccccccChHHHHHHHHhcC
Q 014855           81 NRFLCEICNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        81 k~~~C~~Cgk~F~~~~~L~~H~~~H~  106 (417)
                      |||+|++|||.|...++|.+|+|+|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            68999999999999999999999984

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.63  E-value=2.4e-09  Score=71.54  Aligned_cols=39  Identities=21%  Similarity=0.436  Sum_probs=31.2

Q ss_pred             HHHHHHhhccCCCccccCc--CCccccChhhHHHHHHH-hCCC
Q 014855          145 GIKKHFSRKHGEKKWKCEK--CSKKYAVQSDWKAHSKI-CGTR  184 (417)
Q Consensus       145 ~L~~H~~~H~~ekp~~C~~--C~k~F~~~~~L~~H~~~-~~ek  184 (417)
                      .|.+|++ |+|||||+|.+  |+|+|.+.++|+.|+++ +|||
T Consensus         6 ~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           6 SIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            4566764 88888888877  88888888888888888 6764

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.63  E-value=6.4e-09  Score=61.91  Aligned_cols=26  Identities=35%  Similarity=0.740  Sum_probs=25.3

Q ss_pred             CceecccccccccChHHHHHHHHhcC
Q 014855           81 NRFLCEICNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        81 k~~~C~~Cgk~F~~~~~L~~H~~~H~  106 (417)
                      |+|.|++|||.|..+++|.+|+++|+
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~Ht   26 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQ   26 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGG
T ss_pred             CCEECCcCCCeecchHHhhhhcCccC
Confidence            68999999999999999999999998

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.61  E-value=1.1e-08  Score=64.29  Aligned_cols=32  Identities=16%  Similarity=0.474  Sum_probs=29.0

Q ss_pred             cccCCCCceecccccccccChHHHHHHHHhcC
Q 014855           75 KSLMATNRFLCEICNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        75 ~~~~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~  106 (417)
                      +.|+++|||+|++|++.|..+.+|++|++.++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H   32 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKH   32 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHccccc
Confidence            47899999999999999999999999986554

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.60  E-value=1.2e-08  Score=60.70  Aligned_cols=29  Identities=28%  Similarity=0.584  Sum_probs=18.4

Q ss_pred             ceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCC
Q 014855          122 KVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEK  157 (417)
Q Consensus       122 k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ek  157 (417)
                      |||.|++|       ++.|...+.|++|+++|+|||
T Consensus         1 kp~~C~~C-------~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVC-------TRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTT-------CCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCC-------CCCCCCchHcccccCcccCCC
Confidence            45666666       666666666666666666654

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.56  E-value=1.1e-08  Score=64.06  Aligned_cols=33  Identities=30%  Similarity=0.669  Sum_probs=30.9

Q ss_pred             eeccc--ccccccChHHHHHHHHhcCCCcccccccccccCCceeeCCC
Q 014855           83 FLCEI--CNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPE  128 (417)
Q Consensus        83 ~~C~~--Cgk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~  128 (417)
                      |.|+.  ||+.|.++.+|++|+++|+             ++|||.|+.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Ht-------------gekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHS-------------DTRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHH-------------TSCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhccccCeeC-------------CCCCEeCCC
Confidence            88987  9999999999999999999             999999973

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.49  E-value=2.7e-08  Score=58.57  Aligned_cols=25  Identities=16%  Similarity=0.593  Sum_probs=13.2

Q ss_pred             CCccccCcCCccccChhhHHHHHHH
Q 014855          156 EKKWKCEKCSKKYAVQSDWKAHSKI  180 (417)
Q Consensus       156 ekp~~C~~C~k~F~~~~~L~~H~~~  180 (417)
                      ||||+|.+|+|+|.++++|++|+++
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~   25 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRT   25 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHH
T ss_pred             CcCccCCCCcCEecccccccccCCC
Confidence            3455555555555555555555554

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.49  E-value=2.1e-08  Score=57.61  Aligned_cols=24  Identities=42%  Similarity=0.913  Sum_probs=14.4

Q ss_pred             Cceeec-CCCccCCchHHHHHHhhc
Q 014855          184 REYKCD-CGKLFSRRDSFITHRAFC  207 (417)
Q Consensus       184 kp~~C~-C~k~F~~~~~L~~H~~~h  207 (417)
                      |||+|. |||.|..++.|.+|+++|
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCC
Confidence            456665 666666666666666554

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.49  E-value=3e-08  Score=58.90  Aligned_cols=29  Identities=24%  Similarity=0.496  Sum_probs=15.9

Q ss_pred             ceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCC
Q 014855          122 KVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEK  157 (417)
Q Consensus       122 k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ek  157 (417)
                      |||.|.+|       ++.|..++.|.+|+++|+|||
T Consensus         1 Kpy~C~~C-------~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPEC-------PKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTT-------TCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcC-------CCeecchHHhhhhcCccCCcC
Confidence            34555555       555555555555555555553

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.43  E-value=9.3e-09  Score=68.63  Aligned_cols=33  Identities=18%  Similarity=0.487  Sum_probs=30.0

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCC
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEK  157 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ek  157 (417)
                      ++++|.|.+-+|     ++.|...++|++|+++|+|||
T Consensus        15 gekpy~C~~~~C-----~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_          15 PDKTFECLFPGC-----TKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             TTTEEECCCTTC-----CCEECSSSSHHHHHHHHTTTC
T ss_pred             CCCCeECCcCCC-----CccccCchHHHhhcccccCCC
Confidence            999999998333     999999999999999999986

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.42  E-value=7.7e-08  Score=58.06  Aligned_cols=31  Identities=19%  Similarity=0.518  Sum_probs=25.0

Q ss_pred             ceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCC
Q 014855          122 KVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEK  157 (417)
Q Consensus       122 k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ek  157 (417)
                      |||.|++-+|     ++.|...++|++|+++|+|||
T Consensus         1 kpf~C~~~~C-----~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYC-----GKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTC-----CCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCC-----CcCcCChhHhhhhcCcccccC
Confidence            5788876555     888888888888888888875

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.35  E-value=1.1e-07  Score=56.85  Aligned_cols=30  Identities=17%  Similarity=0.406  Sum_probs=22.2

Q ss_pred             ceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCC
Q 014855          122 KVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGE  156 (417)
Q Consensus       122 k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~e  156 (417)
                      |||.|++-+|     +++|...+.|++|+++|+||
T Consensus         1 kp~~C~~~gC-----gk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGC-----GKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTC-----CCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCC-----CceECcHHHcCccccccCCC
Confidence            5677777544     78888888888888887775

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.35  E-value=1.3e-07  Score=56.41  Aligned_cols=30  Identities=27%  Similarity=0.526  Sum_probs=21.5

Q ss_pred             ceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCC
Q 014855          122 KVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGE  156 (417)
Q Consensus       122 k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~e  156 (417)
                      |||.|++-||     ++.|...+.|++|+++|+||
T Consensus         1 kp~~C~~~gC-----gk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGC-----RKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTC-----CCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCC-----CceECChhHhhhhcCcCcCC
Confidence            4677777444     77777777777777777775

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.33  E-value=1.2e-07  Score=56.68  Aligned_cols=26  Identities=35%  Similarity=0.726  Sum_probs=25.0

Q ss_pred             Cceeccc--ccccccChHHHHHHHHhcC
Q 014855           81 NRFLCEI--CNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        81 k~~~C~~--Cgk~F~~~~~L~~H~~~H~  106 (417)
                      |||+|++  |||.|....+|++|+|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~Ht   28 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHT   28 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTT
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCc
Confidence            6899998  9999999999999999998

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.31  E-value=1.1e-07  Score=56.83  Aligned_cols=26  Identities=42%  Similarity=0.738  Sum_probs=24.8

Q ss_pred             Cceeccc--ccccccChHHHHHHHHhcC
Q 014855           81 NRFLCEI--CNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        81 k~~~C~~--Cgk~F~~~~~L~~H~~~H~  106 (417)
                      |||+|++  |||.|....+|++|+|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HT   28 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHT   28 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHH
T ss_pred             CCccCCCCCCCceECcHHHcCccccccC
Confidence            6899987  9999999999999999998

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.20  E-value=3.3e-07  Score=55.21  Aligned_cols=26  Identities=42%  Similarity=0.914  Sum_probs=24.3

Q ss_pred             Cceecc--cccccccChHHHHHHHHhcC
Q 014855           81 NRFLCE--ICNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        81 k~~~C~--~Cgk~F~~~~~L~~H~~~H~  106 (417)
                      |||.|+  .|||.|....+|++|+++|+
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~Ht   28 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHT   28 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTS
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCccc
Confidence            689996  59999999999999999998

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.17  E-value=4.3e-07  Score=54.97  Aligned_cols=27  Identities=30%  Similarity=0.815  Sum_probs=25.7

Q ss_pred             CCceeccc--ccccccChHHHHHHHHhcC
Q 014855           80 TNRFLCEI--CNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        80 ~k~~~C~~--Cgk~F~~~~~L~~H~~~H~  106 (417)
                      +|||.|.+  |||.|.+..+|++|+++|.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht   29 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQ   29 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGT
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhcc
Confidence            58999988  9999999999999999997

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.16  E-value=4.3e-07  Score=53.66  Aligned_cols=29  Identities=24%  Similarity=0.698  Sum_probs=23.0

Q ss_pred             ceeeCCCCCccCCCCCCcccCHHHHHHHHhhccC
Q 014855          122 KVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHG  155 (417)
Q Consensus       122 k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~  155 (417)
                      |||.|++.||     ++.|.+.++|++|+++|+|
T Consensus         1 Kp~~C~~~gC-----~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESC-----DRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTC-----CCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCC-----CcEECchhHhhhhcCccCC
Confidence            5788888666     8888888888888888875

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.14  E-value=5.6e-07  Score=49.13  Aligned_cols=25  Identities=40%  Similarity=0.800  Sum_probs=23.6

Q ss_pred             ceecccccccccChHHHHHHHHhcC
Q 014855           82 RFLCEICNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        82 ~~~C~~Cgk~F~~~~~L~~H~~~H~  106 (417)
                      |++|++|+|.|.++..|+.|+|.|+
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~ht   25 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHT   25 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccC
Confidence            4789999999999999999999997

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.12  E-value=4.1e-07  Score=53.73  Aligned_cols=26  Identities=31%  Similarity=0.760  Sum_probs=24.6

Q ss_pred             Cceeccc--ccccccChHHHHHHHHhcC
Q 014855           81 NRFLCEI--CNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        81 k~~~C~~--Cgk~F~~~~~L~~H~~~H~  106 (417)
                      |||+|++  |||.|.+..+|++|+|+|+
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~Ht   28 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHT   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHH
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccC
Confidence            6899988  9999999999999999996

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.11  E-value=3.2e-07  Score=53.65  Aligned_cols=26  Identities=35%  Similarity=0.740  Sum_probs=24.4

Q ss_pred             Cceeccc--ccccccChHHHHHHHHhcC
Q 014855           81 NRFLCEI--CNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        81 k~~~C~~--Cgk~F~~~~~L~~H~~~H~  106 (417)
                      |||.|++  |||.|....+|++|+|+|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            6899988  9999999999999999985

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.08  E-value=1.1e-06  Score=53.06  Aligned_cols=30  Identities=20%  Similarity=0.503  Sum_probs=17.6

Q ss_pred             CceeeCCCCCccCCCCCCcccCHHHHHHHHhhccC
Q 014855          121 KKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHG  155 (417)
Q Consensus       121 ~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~  155 (417)
                      ++||.|.+.||     ++.|...++|++|+++|+.
T Consensus         1 ErP~~C~~pgC-----~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGC-----DKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTC-----CCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCC-----CCeeCCHHHHHHHhhhccC
Confidence            35566666444     6666666666666666654

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.04  E-value=1.1e-06  Score=49.53  Aligned_cols=25  Identities=32%  Similarity=0.784  Sum_probs=16.3

Q ss_pred             CCceeec-CCCccCCchHHHHHHhhc
Q 014855          183 TREYKCD-CGKLFSRRDSFITHRAFC  207 (417)
Q Consensus       183 ekp~~C~-C~k~F~~~~~L~~H~~~h  207 (417)
                      ||||.|+ ||+.|.+.+..++|.++|
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhc
Confidence            4666666 666666666666666665

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.03  E-value=1.4e-06  Score=49.15  Aligned_cols=27  Identities=30%  Similarity=0.682  Sum_probs=25.4

Q ss_pred             CCceecccccccccChHHHHHHHHhcC
Q 014855           80 TNRFLCEICNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        80 ~k~~~C~~Cgk~F~~~~~L~~H~~~H~  106 (417)
                      +|||.|++||+.|......++|.++|-
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            589999999999999999999999984

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.93  E-value=1.3e-06  Score=50.96  Aligned_cols=27  Identities=30%  Similarity=0.646  Sum_probs=14.5

Q ss_pred             eeeCCCCCccCCCCCCcccCHHHHHHHHhhcc
Q 014855          123 VYVCPEPTCVHHDPSRALGDLTGIKKHFSRKH  154 (417)
Q Consensus       123 ~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~  154 (417)
                      ||.|++-||     +|.|...++|++|+++|+
T Consensus         2 Pf~C~~~gC-----~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           2 PYVCPFDGC-----NKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCSTTC-----CCCCSSTTTTHHHHHHHC
T ss_pred             CcCCCCCCc-----CCcCCCHHHHHHHHhhcc
Confidence            455555444     555555555555555553

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.85  E-value=4.5e-06  Score=48.87  Aligned_cols=31  Identities=35%  Similarity=0.660  Sum_probs=28.6

Q ss_pred             CceecccccccccChHHHHHHHHhcCCCcccccccccccCCcee
Q 014855           81 NRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVY  124 (417)
Q Consensus        81 k~~~C~~Cgk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~  124 (417)
                      |...|+.|||.|.....|.+|...|.             ++|||
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs-------------~ekpy   34 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHS-------------GEKPY   34 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSC-------------SCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccC-------------CCCCC
Confidence            55789999999999999999999999             88887

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.76  E-value=7.3e-06  Score=44.66  Aligned_cols=19  Identities=16%  Similarity=0.364  Sum_probs=11.4

Q ss_pred             CCcccCHHHHHHHHhhccC
Q 014855          137 SRALGDLTGIKKHFSRKHG  155 (417)
Q Consensus       137 ~k~f~~~~~L~~H~~~H~~  155 (417)
                      ++.|.++..|+.|+|.|+|
T Consensus         8 ~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           8 GKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             TBCCCCHHHHHHHGGGCCC
T ss_pred             hhHhcchhHHHHHhhccCC
Confidence            5666666666666666554

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.54  E-value=2.1e-05  Score=45.99  Aligned_cols=32  Identities=22%  Similarity=0.381  Sum_probs=25.8

Q ss_pred             ceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCCccc
Q 014855          122 KVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWK  160 (417)
Q Consensus       122 k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ekp~~  160 (417)
                      +...|+.|       |+.|.+...|.+|...|++||||.
T Consensus         4 k~~~ce~c-------gk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           4 KQVACEIC-------GKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             CSEEETTT-------TEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             hhhhHHHH-------HHHHHHHHHHHhhhcccCCCCCCC
Confidence            44678888       888888888888888888888873

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.48  E-value=2.3e-05  Score=44.72  Aligned_cols=27  Identities=26%  Similarity=0.752  Sum_probs=25.7

Q ss_pred             CCceecccccccccChHHHHHHHHhcC
Q 014855           80 TNRFLCEICNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        80 ~k~~~C~~Cgk~F~~~~~L~~H~~~H~  106 (417)
                      +|||.|++|+..|.++..+..|.|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshd   27 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHD   27 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHS
T ss_pred             CCCcccchHHHHhhccccceEeeeccc
Confidence            589999999999999999999999997

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.41  E-value=5.8e-05  Score=43.05  Aligned_cols=29  Identities=38%  Similarity=0.817  Sum_probs=19.8

Q ss_pred             ceeeCCCCCccCCCCCCcccCHHHHHHHHhhccC
Q 014855          122 KVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHG  155 (417)
Q Consensus       122 k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~  155 (417)
                      |||.|.+.||     ++++...+.|.+|++.++|
T Consensus         1 KPY~Ck~~gC-----~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGC-----TKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTT-----CCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCC-----CcccCCHHHHHHHHHhhCC
Confidence            4677777666     7777777777777776554

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.39  E-value=4.5e-05  Score=43.49  Aligned_cols=24  Identities=17%  Similarity=0.498  Sum_probs=12.4

Q ss_pred             CccccCcCCccccChhhHHHHHHH
Q 014855          157 KKWKCEKCSKKYAVQSDWKAHSKI  180 (417)
Q Consensus       157 kp~~C~~C~k~F~~~~~L~~H~~~  180 (417)
                      |||.|++|+.+|++++.+..|.|.
T Consensus         2 kp~~cpic~qrfkrkdrmsyhvrs   25 (32)
T d2epqa1           2 KPYSCPVCGLRFKRKDRMSYHVRS   25 (32)
T ss_dssp             CSSEETTTTEECSCHHHHHHHHHH
T ss_pred             CCcccchHHHHhhccccceEeeec
Confidence            455555555555555555555544

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.31  E-value=9.3e-05  Score=41.03  Aligned_cols=27  Identities=33%  Similarity=0.502  Sum_probs=22.4

Q ss_pred             eeeCCCCCccCCCCCCcccCHHHHHHHHhhccCC
Q 014855          123 VYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGE  156 (417)
Q Consensus       123 ~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~e  156 (417)
                      .+.|.+|       ||.|...+.|++|..+|+||
T Consensus         2 ~hvc~ec-------gkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           2 VHVCAEC-------GKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CEECTTT-------CCEESSHHHHHHHGGGTSCC
T ss_pred             cchHHHH-------hHHHHHHHHHHHHhhcccCC
Confidence            3578888       88999889999998888875

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.30  E-value=9.3e-05  Score=41.48  Aligned_cols=27  Identities=22%  Similarity=0.380  Sum_probs=23.1

Q ss_pred             eeCCCCCccCCCCCCcccCHHHHHHHHhhccCCC
Q 014855          124 YVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEK  157 (417)
Q Consensus       124 ~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ek  157 (417)
                      |.|+.|       +......+-|++|+|.|++++
T Consensus         2 YvC~~C-------g~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEEC-------GIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTT-------CCBCSSHHHHHHHHHHTSSCC
T ss_pred             cccccc-------CcccCCHHHHHHHHHHhcCCC
Confidence            788888       888888889999999998875

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.29  E-value=5.4e-05  Score=46.76  Aligned_cols=28  Identities=43%  Similarity=0.915  Sum_probs=20.7

Q ss_pred             hCCCceeec-CCCccCCchHHHHHHhhcc
Q 014855          181 CGTREYKCD-CGKLFSRRDSFITHRAFCD  208 (417)
Q Consensus       181 ~~ekp~~C~-C~k~F~~~~~L~~H~~~h~  208 (417)
                      +|-|||.|. |+|.|-.+++|.+|...|.
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~~C~   29 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVTSCT   29 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhhhhh
Confidence            356788887 8888888888888876653

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.29  E-value=8.6e-05  Score=41.16  Aligned_cols=25  Identities=28%  Similarity=0.578  Sum_probs=23.5

Q ss_pred             ceecccccccccChHHHHHHHHhcC
Q 014855           82 RFLCEICNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        82 ~~~C~~Cgk~F~~~~~L~~H~~~H~  106 (417)
                      .+.|.+|||.|...+.|++|..+|+
T Consensus         2 ~hvc~ecgkaf~essklkrh~lvht   26 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQLVHT   26 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGTS
T ss_pred             cchHHHHhHHHHHHHHHHHHhhccc
Confidence            4789999999999999999999998

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.18  E-value=9.4e-05  Score=42.16  Aligned_cols=25  Identities=24%  Similarity=0.551  Sum_probs=18.0

Q ss_pred             Cceeec---CCCccCCchHHHHHHhhcc
Q 014855          184 REYKCD---CGKLFSRRDSFITHRAFCD  208 (417)
Q Consensus       184 kp~~C~---C~k~F~~~~~L~~H~~~h~  208 (417)
                      |||.|.   |+|+|...++|++|++.+|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhC
Confidence            577774   7777777777777777654

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.18  E-value=0.00014  Score=40.50  Aligned_cols=29  Identities=14%  Similarity=0.322  Sum_probs=20.0

Q ss_pred             CceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCC
Q 014855          121 KKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGE  156 (417)
Q Consensus       121 ~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~e  156 (417)
                      ++||+|..|       ...-.+.+.|..|+|.|+|+
T Consensus         1 erpfkcqlc-------sy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQIC-------PYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSS-------SCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeec-------ccccCCchheEEeeecccCc
Confidence            356777777       66666777777777777663

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.05  E-value=0.00022  Score=38.92  Aligned_cols=26  Identities=27%  Similarity=0.381  Sum_probs=21.1

Q ss_pred             eCCCCCccCCCCCCcccCHHHHHHHHhhccCCC
Q 014855          125 VCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEK  157 (417)
Q Consensus       125 ~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ek  157 (417)
                      .|+.|       .+.|.++..|+.|.|.|+|||
T Consensus         2 qcp~c-------~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTC-------HKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTT-------CCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcch-------HHHHHHhHhhhhccccccCCC
Confidence            47777       888888888888888888875

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.02  E-value=0.00014  Score=39.02  Aligned_cols=23  Identities=26%  Similarity=0.736  Sum_probs=18.6

Q ss_pred             eeec-CCCccCCchHHHHHHhhcc
Q 014855          186 YKCD-CGKLFSRRDSFITHRAFCD  208 (417)
Q Consensus       186 ~~C~-C~k~F~~~~~L~~H~~~h~  208 (417)
                      |+|. |.+.|..++.|.+|++.|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            6788 8888888888888888763

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.97  E-value=0.00022  Score=43.94  Aligned_cols=27  Identities=22%  Similarity=0.524  Sum_probs=24.0

Q ss_pred             CCCCceecccccccccChHHHHHHHHh
Q 014855           78 MATNRFLCEICNKGFQRDQNLQLHRRG  104 (417)
Q Consensus        78 ~~~k~~~C~~Cgk~F~~~~~L~~H~~~  104 (417)
                      ++.|||.|.+|+|.|-++..+.+|...
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhhh
Confidence            367899999999999999999999754

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.92  E-value=0.00031  Score=39.30  Aligned_cols=25  Identities=28%  Similarity=0.642  Sum_probs=23.9

Q ss_pred             ceecccccccccChHHHHHHHHhcC
Q 014855           82 RFLCEICNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        82 ~~~C~~Cgk~F~~~~~L~~H~~~H~  106 (417)
                      +|.|+.||......+-|+.|+|.|+
T Consensus         1 kYvC~~Cg~~C~KPSvL~KHIRsHT   25 (28)
T d1bboa1           1 KYICEECGIRAKKPSMLKKHIRTHT   25 (28)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTS
T ss_pred             CccccccCcccCCHHHHHHHHHHhc
Confidence            4899999999999999999999998

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.81  E-value=0.00026  Score=39.48  Aligned_cols=24  Identities=29%  Similarity=0.564  Sum_probs=17.7

Q ss_pred             Cceeec---CCCccCCchHHHHHHhhc
Q 014855          184 REYKCD---CGKLFSRRDSFITHRAFC  207 (417)
Q Consensus       184 kp~~C~---C~k~F~~~~~L~~H~~~h  207 (417)
                      .||+|.   |++.|...+.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            367774   777787777787777765

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.81  E-value=0.00034  Score=39.24  Aligned_cols=30  Identities=27%  Similarity=0.592  Sum_probs=25.4

Q ss_pred             ceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCC
Q 014855          122 KVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGE  156 (417)
Q Consensus       122 k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~e  156 (417)
                      +||.|.+-||     .|.|.....|.+|..+|+||
T Consensus         1 ~pfpc~~egc-----~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGC-----EKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSC-----CCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccc-----cccchhhhhhhhhhccccCC
Confidence            5788888877     89999999999998888875

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.80  E-value=0.00049  Score=42.08  Aligned_cols=27  Identities=26%  Similarity=0.587  Sum_probs=25.2

Q ss_pred             CCceecccccccccChHHHHHHHHhcC
Q 014855           80 TNRFLCEICNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        80 ~k~~~C~~Cgk~F~~~~~L~~H~~~H~  106 (417)
                      .+.|+|.+|++.|.+-..|--||+.|.
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr   29 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHR   29 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTC
T ss_pred             CCccCCCCCCCccCCcccccchHhhhc
Confidence            357999999999999999999999997

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.70  E-value=0.00059  Score=37.62  Aligned_cols=26  Identities=23%  Similarity=0.506  Sum_probs=24.7

Q ss_pred             CceecccccccccChHHHHHHHHhcC
Q 014855           81 NRFLCEICNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        81 k~~~C~~Cgk~F~~~~~L~~H~~~H~  106 (417)
                      |||+|..|...-...+.|..|.|+|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            78999999999999999999999985

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=96.67  E-value=0.00048  Score=36.93  Aligned_cols=24  Identities=29%  Similarity=0.778  Sum_probs=22.7

Q ss_pred             eecccccccccChHHHHHHHHhcC
Q 014855           83 FLCEICNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        83 ~~C~~Cgk~F~~~~~L~~H~~~H~  106 (417)
                      |+|..|.+.|..++.|.+|.|+|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            789999999999999999999985

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.67  E-value=0.00044  Score=38.68  Aligned_cols=23  Identities=17%  Similarity=0.528  Sum_probs=11.0

Q ss_pred             ccccCcCCccccChhhHHHHHHH
Q 014855          158 KWKCEKCSKKYAVQSDWKAHSKI  180 (417)
Q Consensus       158 p~~C~~C~k~F~~~~~L~~H~~~  180 (417)
                      ||.|..|..+|+++.+|..||+.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            34444444444444444444443

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.65  E-value=0.00079  Score=37.56  Aligned_cols=27  Identities=33%  Similarity=0.776  Sum_probs=25.1

Q ss_pred             CCceecccccccccChHHHHHHHHhcC
Q 014855           80 TNRFLCEICNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        80 ~k~~~C~~Cgk~F~~~~~L~~H~~~H~  106 (417)
                      +..|.|..|.+.|+++-.|+.||-.|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvsht   28 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHT   28 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeeccc
Confidence            456999999999999999999999997

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.64  E-value=0.00054  Score=37.32  Aligned_cols=23  Identities=35%  Similarity=0.706  Sum_probs=22.1

Q ss_pred             ecccccccccChHHHHHHHHhcC
Q 014855           84 LCEICNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        84 ~C~~Cgk~F~~~~~L~~H~~~H~  106 (417)
                      +|+.|.|.|.++..|+.|-|.|+
T Consensus         2 qcp~c~k~f~skyylkvhnr~ht   24 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHT   24 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHS
T ss_pred             cCcchHHHHHHhHhhhhcccccc
Confidence            69999999999999999999998

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.62  E-value=0.0004  Score=39.84  Aligned_cols=22  Identities=14%  Similarity=0.480  Sum_probs=10.0

Q ss_pred             cccCcCCccccChhhHHHHHHH
Q 014855          159 WKCEKCSKKYAVQSDWKAHSKI  180 (417)
Q Consensus       159 ~~C~~C~k~F~~~~~L~~H~~~  180 (417)
                      |.|.+|++.|.+++.|.+|...
T Consensus         2 f~C~~C~R~FaRrDLlLRH~qK   23 (31)
T d2adra2           2 YPCGLCNRAFTRRDLLIRHAQK   23 (31)
T ss_dssp             EECTTTCCEESSHHHHHHHHTT
T ss_pred             cccccccchhhHHHHHHHHHHH
Confidence            4444444444444444444433

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.58  E-value=0.00076  Score=37.59  Aligned_cols=27  Identities=22%  Similarity=0.496  Sum_probs=22.6

Q ss_pred             ceeeCCCCCccCCCCCCcccCHHHHHHHHhhc
Q 014855          122 KVYVCPEPTCVHHDPSRALGDLTGIKKHFSRK  153 (417)
Q Consensus       122 k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H  153 (417)
                      .||+|+.-||     ++.|...+.|++|.++|
T Consensus         2 ~py~c~hegc-----dk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGC-----DKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTC-----CCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCc-----cccccCHHHHhhhhhcc
Confidence            4788887777     89999999999998877

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.55  E-value=0.00056  Score=38.02  Aligned_cols=25  Identities=24%  Similarity=0.480  Sum_probs=16.7

Q ss_pred             CCccccCcCCccccChhhHHHHHHH
Q 014855          156 EKKWKCEKCSKKYAVQSDWKAHSKI  180 (417)
Q Consensus       156 ekp~~C~~C~k~F~~~~~L~~H~~~  180 (417)
                      |+||+|..|...-...+.|..|+|.
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~   25 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRS   25 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTT
T ss_pred             CCcceeeecccccCCchheEEeeec
Confidence            4666776666666666666666665

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.55  E-value=0.00076  Score=37.79  Aligned_cols=27  Identities=30%  Similarity=0.501  Sum_probs=18.8

Q ss_pred             CccccCcCCccccChhhHHHHHHH-hCC
Q 014855          157 KKWKCEKCSKKYAVQSDWKAHSKI-CGT  183 (417)
Q Consensus       157 kp~~C~~C~k~F~~~~~L~~H~~~-~~e  183 (417)
                      +||+|..|....+.+++|..|++. ||.
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~D   28 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHGD   28 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred             CCcccceecccccCcchHHHHHHHHccC
Confidence            467777777777777777777766 553

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.45  E-value=0.0011  Score=36.58  Aligned_cols=26  Identities=27%  Similarity=0.420  Sum_probs=16.8

Q ss_pred             ceeeCCCCCccCCCCCCcccCHHHHHHHHhhcc
Q 014855          122 KVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKH  154 (417)
Q Consensus       122 k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~  154 (417)
                      +||+|..|       ...-.+.+.|++|+|+|.
T Consensus         2 kp~kck~c-------dyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTC-------DYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSS-------CCEESSHHHHHHHHHHSC
T ss_pred             CCcccccc-------cchhcchhhHhhhhhccc
Confidence            46666666       666666666666666664

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.42  E-value=0.00087  Score=37.46  Aligned_cols=24  Identities=29%  Similarity=0.652  Sum_probs=22.1

Q ss_pred             ceecccccccccChHHHHHHHHhc
Q 014855           82 RFLCEICNKGFQRDQNLQLHRRGH  105 (417)
Q Consensus        82 ~~~C~~Cgk~F~~~~~L~~H~~~H  105 (417)
                      ||.|..|+..|.++.+|..||+.-
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSS
T ss_pred             CcccceeeeeEeeccchhHhhhhh
Confidence            699999999999999999999753

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.39  E-value=0.00082  Score=40.78  Aligned_cols=27  Identities=22%  Similarity=0.680  Sum_probs=22.6

Q ss_pred             CCCceeec---CCCccCCchHHHHHHhhcc
Q 014855          182 GTREYKCD---CGKLFSRRDSFITHRAFCD  208 (417)
Q Consensus       182 ~ekp~~C~---C~k~F~~~~~L~~H~~~h~  208 (417)
                      .+|||.|.   |+.+|...+.|..|++.|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            47888884   8899999989988888885

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.28  E-value=0.0011  Score=37.99  Aligned_cols=24  Identities=38%  Similarity=0.822  Sum_probs=21.6

Q ss_pred             ceeec-CCCccCCchHHHHHHhhcc
Q 014855          185 EYKCD-CGKLFSRRDSFITHRAFCD  208 (417)
Q Consensus       185 p~~C~-C~k~F~~~~~L~~H~~~h~  208 (417)
                      ||.|. |++.|.+++.|.+|..+-|
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH   25 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIH   25 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTS
T ss_pred             CcccccccchhhHHHHHHHHHHHHh
Confidence            79999 9999999999999986644

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.21  E-value=0.0017  Score=36.37  Aligned_cols=24  Identities=33%  Similarity=0.600  Sum_probs=13.4

Q ss_pred             CccccCcCCccccChhhHHHHHHH
Q 014855          157 KKWKCEKCSKKYAVQSDWKAHSKI  180 (417)
Q Consensus       157 kp~~C~~C~k~F~~~~~L~~H~~~  180 (417)
                      |||.|..|..+-...++|+.|+++
T Consensus         1 kpy~cqyc~yrsadssnlkthikt   24 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKT   24 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHH
T ss_pred             CCccccccccccccchhhhhhhhc
Confidence            355555555555555555555555

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.21  E-value=0.0018  Score=36.03  Aligned_cols=29  Identities=17%  Similarity=0.423  Sum_probs=21.4

Q ss_pred             CceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCC
Q 014855          121 KKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGE  156 (417)
Q Consensus       121 ~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~e  156 (417)
                      +..|.|..|       ...|.++-.|..||..|+||
T Consensus         2 eqvftcs~c-------qe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVC-------QETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSS-------CCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHH-------HHHHHHHHhheeeeecccCC
Confidence            355777777       77777777777777777764

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.01  E-value=0.0015  Score=36.53  Aligned_cols=26  Identities=35%  Similarity=0.677  Sum_probs=23.7

Q ss_pred             Cceeccc--ccccccChHHHHHHHHhcC
Q 014855           81 NRFLCEI--CNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        81 k~~~C~~--Cgk~F~~~~~L~~H~~~H~  106 (417)
                      |||.|..  |.|.|.+...|.+|..+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~tht   28 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHT   28 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHH
T ss_pred             CCcCcccccccccchhhhhhhhhhcccc
Confidence            5799965  9999999999999999987

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.87  E-value=0.0026  Score=35.66  Aligned_cols=27  Identities=30%  Similarity=0.457  Sum_probs=24.1

Q ss_pred             ceeeCCCCCccCCCCCCcccCHHHHHHHHhhccC
Q 014855          122 KVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHG  155 (417)
Q Consensus       122 k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~  155 (417)
                      +||.|..|       .....+.++|+.|+++.++
T Consensus         1 kpy~cqyc-------~yrsadssnlkthiktkhs   27 (30)
T d1klra_           1 KTYQCQYC-------EFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCCSSS-------SCCCSCSHHHHHHHHHHTS
T ss_pred             CCcccccc-------ccccccchhhhhhhhcccc
Confidence            58999999       9999999999999998654

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.85  E-value=0.0026  Score=37.67  Aligned_cols=32  Identities=25%  Similarity=0.418  Sum_probs=23.8

Q ss_pred             eeeCCCCCccCCCCCCcccCHHHHHHHHhhccCC
Q 014855          123 VYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGE  156 (417)
Q Consensus       123 ~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~e  156 (417)
                      .|.|..-+|...  ++.|..+..|..|+|+|+||
T Consensus         2 ~y~C~W~~C~R~--~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2           2 EFVCHWGGCSRE--LRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CCCCCBTTCTTT--TCCCSSHHHHHHHTHHHHCC
T ss_pred             CeEEECCCCCCC--CCcchhHHHHHHHHhhcCCC
Confidence            366666666332  56799999999999999986

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.65  E-value=0.0022  Score=36.67  Aligned_cols=29  Identities=28%  Similarity=0.559  Sum_probs=18.7

Q ss_pred             ceeeCCCCCccCCCCCCcccCHHHHHHHH-hhccC
Q 014855          122 KVYVCPEPTCVHHDPSRALGDLTGIKKHF-SRKHG  155 (417)
Q Consensus       122 k~~~C~~C~C~~~~~~k~f~~~~~L~~H~-~~H~~  155 (417)
                      |||.|...||     .|.|...+.-.+|. |+|..
T Consensus         1 kPY~C~~~gC-----~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGC-----SKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTC-----CCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCCh-----hhhhcchhhhhhhccccccC
Confidence            4667766655     77777777666664 55653

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.51  E-value=0.004  Score=34.09  Aligned_cols=21  Identities=29%  Similarity=0.659  Sum_probs=12.0

Q ss_pred             ccccCcCCccccChhhHHHHH
Q 014855          158 KWKCEKCSKKYAVQSDWKAHS  178 (417)
Q Consensus       158 p~~C~~C~k~F~~~~~L~~H~  178 (417)
                      ||+|..|||.|-++.+|..|.
T Consensus         1 pf~c~kcgkcyfrkenllehe   21 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHE   21 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHH
Confidence            455555555555555555554

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.36  E-value=0.0059  Score=36.89  Aligned_cols=30  Identities=17%  Similarity=0.503  Sum_probs=24.9

Q ss_pred             CCceeeCCCCCccCCCCCCcccCHHHHHHHHhhcc
Q 014855          120 RKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKH  154 (417)
Q Consensus       120 ~~k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~  154 (417)
                      .+|||.|...||     +.+|.+...|..|...|.
T Consensus         3 ddkPF~C~~pGC-----~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGC-----GQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTT-----CCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCc-----cccccchHHHHHhhhhhe
Confidence            468899988887     888888888888888775

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.30  E-value=0.0076  Score=36.64  Aligned_cols=29  Identities=14%  Similarity=0.377  Sum_probs=21.5

Q ss_pred             ceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCCC
Q 014855          122 KVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEK  157 (417)
Q Consensus       122 k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~ek  157 (417)
                      +.|+|.+|       ++.|.+-..|--|++.|..++
T Consensus         4 r~~~C~~C-------~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           4 RSYTCSFC-------KREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSEECTTT-------CCEESSHHHHHHHHHTTCCSC
T ss_pred             CccCCCCC-------CCccCCcccccchHhhhcchH
Confidence            55778777       778888777888877776554

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.26  E-value=0.0044  Score=33.91  Aligned_cols=22  Identities=36%  Similarity=0.665  Sum_probs=20.3

Q ss_pred             ceecccccccccChHHHHHHHH
Q 014855           82 RFLCEICNKGFQRDQNLQLHRR  103 (417)
Q Consensus        82 ~~~C~~Cgk~F~~~~~L~~H~~  103 (417)
                      ||+|..|||.|-++.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            6999999999999999999964

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.12  E-value=0.0037  Score=35.75  Aligned_cols=24  Identities=29%  Similarity=0.641  Sum_probs=16.8

Q ss_pred             Cceeec---CCCccCCchHHHHHH-hhc
Q 014855          184 REYKCD---CGKLFSRRDSFITHR-AFC  207 (417)
Q Consensus       184 kp~~C~---C~k~F~~~~~L~~H~-~~h  207 (417)
                      |||.|.   |.|.|+..+.-.+|+ |+|
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTH   28 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTH   28 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTT
T ss_pred             CCccccCCChhhhhcchhhhhhhccccc
Confidence            577774   777777777777775 555

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.11  E-value=0.005  Score=34.39  Aligned_cols=26  Identities=19%  Similarity=0.359  Sum_probs=23.1

Q ss_pred             Cceeec-CCCccCCchHHHHHHhhccc
Q 014855          184 REYKCD-CGKLFSRRDSFITHRAFCDV  209 (417)
Q Consensus       184 kp~~C~-C~k~F~~~~~L~~H~~~h~~  209 (417)
                      +||+|+ |...-.++++|.+|++..|.
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            689999 99999999999999987653

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.06  E-value=0.0051  Score=35.99  Aligned_cols=25  Identities=36%  Similarity=0.899  Sum_probs=20.4

Q ss_pred             ceeec-CCCccCCchHHHHHHhhccc
Q 014855          185 EYKCD-CGKLFSRRDSFITHRAFCDV  209 (417)
Q Consensus       185 p~~C~-C~k~F~~~~~L~~H~~~h~~  209 (417)
                      .|.|. |||+|.++..+.+|-..|..
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            48888 99999988888888877753

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.66  E-value=0.01  Score=31.73  Aligned_cols=23  Identities=30%  Similarity=0.639  Sum_probs=21.1

Q ss_pred             eecccccccccChHHHHHHHHhc
Q 014855           83 FLCEICNKGFQRDQNLQLHRRGH  105 (417)
Q Consensus        83 ~~C~~Cgk~F~~~~~L~~H~~~H  105 (417)
                      |.|+.|-|.|.++.++..|.++-
T Consensus         2 ypcp~cfkeftrkdnm~ahvkii   24 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKII   24 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEEe
Confidence            89999999999999999998753

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.62  E-value=0.011  Score=31.68  Aligned_cols=22  Identities=32%  Similarity=0.696  Sum_probs=15.4

Q ss_pred             cccCcCCccccChhhHHHHHHH
Q 014855          159 WKCEKCSKKYAVQSDWKAHSKI  180 (417)
Q Consensus       159 ~~C~~C~k~F~~~~~L~~H~~~  180 (417)
                      |.|+.|-|.|.+++++..|.++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            5677777777777777777665

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.60  E-value=0.0098  Score=31.70  Aligned_cols=20  Identities=30%  Similarity=0.850  Sum_probs=11.5

Q ss_pred             ceeec-CCCccCCchHHHHHH
Q 014855          185 EYKCD-CGKLFSRRDSFITHR  204 (417)
Q Consensus       185 p~~C~-C~k~F~~~~~L~~H~  204 (417)
                      ||+|. |...|-.+..|..|+
T Consensus         2 pykcsscsqqfmqkkdlqshm   22 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHM   22 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHH
Confidence            45555 555555555555554

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.19  E-value=0.014  Score=31.06  Aligned_cols=23  Identities=26%  Similarity=0.677  Sum_probs=16.5

Q ss_pred             ccccCcCCccccChhhHHHHHHH
Q 014855          158 KWKCEKCSKKYAVQSDWKAHSKI  180 (417)
Q Consensus       158 p~~C~~C~k~F~~~~~L~~H~~~  180 (417)
                      ||+|.-|...|-.+.+|..|+..
T Consensus         2 pykcsscsqqfmqkkdlqshmik   24 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMIK   24 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHHh
Confidence            67777777777777777777643

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.89  E-value=0.016  Score=33.81  Aligned_cols=23  Identities=22%  Similarity=0.588  Sum_probs=19.5

Q ss_pred             ccccCcCCccccChhhHHHHHHH
Q 014855          158 KWKCEKCSKKYAVQSDWKAHSKI  180 (417)
Q Consensus       158 p~~C~~C~k~F~~~~~L~~H~~~  180 (417)
                      .|.|..|||.|.++..+.+|-..
T Consensus         4 afvcskcgktftrrntm~rha~n   26 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADN   26 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHH
T ss_pred             eeeecccccchhcchHHHHHhhh
Confidence            47899999999999888888766

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.82  E-value=0.018  Score=36.48  Aligned_cols=26  Identities=27%  Similarity=0.584  Sum_probs=23.7

Q ss_pred             CceecccccccccChHHHHHHHHhcC
Q 014855           81 NRFLCEICNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        81 k~~~C~~Cgk~F~~~~~L~~H~~~H~  106 (417)
                      -.|.|-.|||.|.....|+.|...|-
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcC
Confidence            45899999999999999999998885

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=93.22  E-value=0.025  Score=31.99  Aligned_cols=30  Identities=30%  Similarity=0.608  Sum_probs=23.8

Q ss_pred             ceeeCCCCCccCCCCCCcccCHHHHHHHHhhccCC
Q 014855          122 KVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHGE  156 (417)
Q Consensus       122 k~~~C~~C~C~~~~~~k~f~~~~~L~~H~~~H~~e  156 (417)
                      |.|.|...+|     +..|.....|..|+-.|+||
T Consensus         2 k~~iCsf~dC-----~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADC-----GAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGG-----CCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCc-----chhhccchhhhHHhhhhcCC
Confidence            4577777666     88888888888888888876

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.13  E-value=0.027  Score=30.77  Aligned_cols=23  Identities=30%  Similarity=0.585  Sum_probs=16.7

Q ss_pred             ccccCcCCccccChhhHHHHHHH
Q 014855          158 KWKCEKCSKKYAVQSDWKAHSKI  180 (417)
Q Consensus       158 p~~C~~C~k~F~~~~~L~~H~~~  180 (417)
                      .|.|+.|+-...++++|+.|++.
T Consensus         2 k~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHH
T ss_pred             CccCCcchhheeehhhhhHHhhh
Confidence            36777777777777777777765

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.08  E-value=0.037  Score=30.24  Aligned_cols=24  Identities=29%  Similarity=0.679  Sum_probs=21.7

Q ss_pred             ceecccccccccChHHHHHHHHhc
Q 014855           82 RFLCEICNKGFQRDQNLQLHRRGH  105 (417)
Q Consensus        82 ~~~C~~Cgk~F~~~~~L~~H~~~H  105 (417)
                      .|.|+.|+....+++.|+.|++.-
T Consensus         2 k~qcphc~tiiarksdlrvhlrnl   25 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRKQ   25 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHT
T ss_pred             CccCCcchhheeehhhhhHHhhhc
Confidence            489999999999999999998753

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.82  E-value=0.039  Score=30.24  Aligned_cols=25  Identities=24%  Similarity=0.416  Sum_probs=23.0

Q ss_pred             ceecccccccccChHHHHHHHHhcC
Q 014855           82 RFLCEICNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        82 ~~~C~~Cgk~F~~~~~L~~H~~~H~  106 (417)
                      +-+|..|.....++..|+.|.|+|.
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            4689999999999999999999985

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.62  E-value=0.056  Score=34.15  Aligned_cols=23  Identities=17%  Similarity=0.411  Sum_probs=11.1

Q ss_pred             cccCcCCccccChhhHHHHHHHh
Q 014855          159 WKCEKCSKKYAVQSDWKAHSKIC  181 (417)
Q Consensus       159 ~~C~~C~k~F~~~~~L~~H~~~~  181 (417)
                      |.|..|||.|.....|+.|...|
T Consensus         7 ~pCG~CgK~Ftd~~rLr~HEAQH   29 (53)
T d2eppa1           7 LPCGLCGKVFTDANRLRQHEAQH   29 (53)
T ss_dssp             CCCTTTCCCCSCHHHHHHHHHHH
T ss_pred             eeccccccccCCHHHHhHhHHhc
Confidence            44555555555555554444433

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.90  E-value=0.15  Score=27.81  Aligned_cols=18  Identities=11%  Similarity=0.041  Sum_probs=11.3

Q ss_pred             CCcccCHHHHHHHHhhcc
Q 014855          137 SRALGDLTGIKKHFSRKH  154 (417)
Q Consensus       137 ~k~f~~~~~L~~H~~~H~  154 (417)
                      ......+..|+.|.|+|-
T Consensus         9 syscsskaalrvh~rihc   26 (28)
T d1x5wa1           9 SYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SCEESSHHHHHHHHGGGC
T ss_pred             ccccCcHHHHHHhhcccc
Confidence            666666666666666653

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=89.58  E-value=0.087  Score=28.50  Aligned_cols=22  Identities=32%  Similarity=0.786  Sum_probs=13.6

Q ss_pred             eeec---CCCccCCchHHHHHHhhc
Q 014855          186 YKCD---CGKLFSRRDSFITHRAFC  207 (417)
Q Consensus       186 ~~C~---C~k~F~~~~~L~~H~~~h  207 (417)
                      |.|.   |+|.|.....|+.|+-.|
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~h   26 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSH   26 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeecc
Confidence            5562   666666666666666554

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=88.88  E-value=0.13  Score=29.98  Aligned_cols=28  Identities=14%  Similarity=0.445  Sum_probs=23.7

Q ss_pred             CCCceecccccccccChHHHHHHHHhcC
Q 014855           79 ATNRFLCEICNKGFQRDQNLQLHRRGHN  106 (417)
Q Consensus        79 ~~k~~~C~~Cgk~F~~~~~L~~H~~~H~  106 (417)
                      +...|.|.+|.+.|...+++-+|..+-+
T Consensus         5 g~~~yRC~~C~r~YTHISNFCRHyvtSH   32 (37)
T d2drpa1           5 GEHTYRCKVCSRVYTHISNFCRHYVTSH   32 (37)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHHHS
T ss_pred             cCcEEEeehhhHHHHHHHHHHHHHHhhc
Confidence            3457999999999999999999965544

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.84  E-value=0.17  Score=27.66  Aligned_cols=23  Identities=22%  Similarity=0.553  Sum_probs=16.7

Q ss_pred             ccCCCCCCcccCHHHHHHHHhhc
Q 014855          131 CVHHDPSRALGDLTGIKKHFSRK  153 (417)
Q Consensus       131 C~~~~~~k~f~~~~~L~~H~~~H  153 (417)
                      |.+.+|+|.|.+.+.+.+|+-+|
T Consensus         4 CphkgC~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           4 CPHKGCTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             CCSTTCCCEESSHHHHHHHHGGG
T ss_pred             CCcccHHHHhhchHHHHHHhhcc
Confidence            34445588888888888887776

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=87.88  E-value=0.18  Score=28.94  Aligned_cols=25  Identities=28%  Similarity=0.650  Sum_probs=21.7

Q ss_pred             CCCceecccccccccChHHHHHHHH
Q 014855           79 ATNRFLCEICNKGFQRDQNLQLHRR  103 (417)
Q Consensus        79 ~~k~~~C~~Cgk~F~~~~~L~~H~~  103 (417)
                      ..-+|.|.-||..|.+.+.|..|+.
T Consensus         5 kparf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           5 KPARFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             SCCCCBCTTTCCBCSCHHHHHHHTT
T ss_pred             cccceeccccceeecChhHHHhhhh
Confidence            3456999999999999999999964

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.80  E-value=0.15  Score=28.18  Aligned_cols=24  Identities=21%  Similarity=0.495  Sum_probs=21.0

Q ss_pred             ceecccccccccChHHHHHHHHhc
Q 014855           82 RFLCEICNKGFQRDQNLQLHRRGH  105 (417)
Q Consensus        82 ~~~C~~Cgk~F~~~~~L~~H~~~H  105 (417)
                      .|.|..|||..++...++.|....
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvmad   25 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMAN   25 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHH
T ss_pred             ceechhHHHHHhhccCceEEEeec
Confidence            489999999999999999996543

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=87.66  E-value=0.14  Score=29.74  Aligned_cols=23  Identities=26%  Similarity=0.631  Sum_probs=10.7

Q ss_pred             ccccCcCCccccChhhHHHHHHH
Q 014855          158 KWKCEKCSKKYAVQSDWKAHSKI  180 (417)
Q Consensus       158 p~~C~~C~k~F~~~~~L~~H~~~  180 (417)
                      -|+|.+|.+.|...+++-+|..+
T Consensus         8 ~yRC~~C~r~YTHISNFCRHyvt   30 (37)
T d2drpa1           8 TYRCKVCSRVYTHISNFCRHYVT   30 (37)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHH
T ss_pred             EEEeehhhHHHHHHHHHHHHHHh
Confidence            34444444444444444444433

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=85.80  E-value=0.29  Score=26.40  Aligned_cols=18  Identities=17%  Similarity=0.178  Sum_probs=11.9

Q ss_pred             CCcccCHHHHHHHHhhcc
Q 014855          137 SRALGDLTGIKKHFSRKH  154 (417)
Q Consensus       137 ~k~f~~~~~L~~H~~~H~  154 (417)
                      ++.|+.-..|+.|.-+|+
T Consensus        10 ~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1          10 GKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             CCEESSHHHHHHHHHHHH
T ss_pred             hHHHhhccceEEEeeccc
Confidence            677776666666666554

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=85.23  E-value=0.18  Score=28.93  Aligned_cols=21  Identities=33%  Similarity=0.735  Sum_probs=13.5

Q ss_pred             ceeec-CCCccCCchHHHHHHh
Q 014855          185 EYKCD-CGKLFSRRDSFITHRA  205 (417)
Q Consensus       185 p~~C~-C~k~F~~~~~L~~H~~  205 (417)
                      .|.|. ||-+|+..+.|..|+.
T Consensus         8 rf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTT
T ss_pred             ceeccccceeecChhHHHhhhh
Confidence            36666 6666666666666654

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.59  E-value=0.23  Score=27.14  Aligned_cols=19  Identities=21%  Similarity=0.417  Sum_probs=15.6

Q ss_pred             CCCccCCchHHHHHHhhcc
Q 014855          190 CGKLFSRRDSFITHRAFCD  208 (417)
Q Consensus       190 C~k~F~~~~~L~~H~~~h~  208 (417)
                      |+|.|+..+.+++|+.+|.
T Consensus         9 C~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           9 CTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             CCCEESSHHHHHHHHGGGS
T ss_pred             HHHHhhchHHHHHHhhccC
Confidence            8888888888888887763

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.70  E-value=0.16  Score=35.10  Aligned_cols=25  Identities=28%  Similarity=0.452  Sum_probs=22.1

Q ss_pred             CCceecccccccccChHHHHHHHHh
Q 014855           80 TNRFLCEICNKGFQRDQNLQLHRRG  104 (417)
Q Consensus        80 ~k~~~C~~Cgk~F~~~~~L~~H~~~  104 (417)
                      ...|-|..|+|.|.+...|..|+++
T Consensus        13 ~gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          13 GGLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCEEecccccCccCCHHHHHHHHcc
Confidence            3459999999999999999999864

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=83.65  E-value=0.46  Score=29.70  Aligned_cols=25  Identities=16%  Similarity=0.349  Sum_probs=14.9

Q ss_pred             CCccccCcCCccccChhhHHHHHHH
Q 014855          156 EKKWKCEKCSKKYAVQSDWKAHSKI  180 (417)
Q Consensus       156 ekp~~C~~C~k~F~~~~~L~~H~~~  180 (417)
                      +.|-.|++|+.......+|++|+..
T Consensus        22 ~qpatcpic~avirqsrnlrrhlel   46 (54)
T d1yuja_          22 EQPATCPICYAVIRQSRNLRRHLEL   46 (54)
T ss_dssp             SCCEECTTTCCEESSHHHHHHHHHH
T ss_pred             cCCCCCchHHHHHHHHHHHHHHHHH
Confidence            4555666666666666666666555

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.93  E-value=0.44  Score=32.19  Aligned_cols=38  Identities=18%  Similarity=0.295  Sum_probs=26.9

Q ss_pred             cCCCCceecccccccccChHHHHHHHHhcCCCcccccccccccCCceeeCCCCC
Q 014855           77 LMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKVERKKVYVCPEPT  130 (417)
Q Consensus        77 ~~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~p~~~~~~~~~~~~~k~~~C~~C~  130 (417)
                      -.....|+|+.|++.|.....++.   .-.             ....|.|..|+
T Consensus         9 ~~~~~~y~Cp~C~~~ys~Lda~~L---~d~-------------~~~~F~C~~C~   46 (62)
T d1vd4a_           9 STNRASFKCPVCSSTFTDLEANQL---FDP-------------MTGTFRCTFCH   46 (62)
T ss_dssp             CCSSSEEECSSSCCEEEHHHHHHH---EET-------------TTTEEBCSSSC
T ss_pred             cccCCceECCCCCCCcchhhHHHh---cCc-------------CCCeEEecCCC
Confidence            344567999999999987766553   111             34569999994

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=81.72  E-value=0.53  Score=26.36  Aligned_cols=27  Identities=26%  Similarity=0.522  Sum_probs=17.1

Q ss_pred             CccccCc--CCccccChhhHHHHHHH-hCC
Q 014855          157 KKWKCEK--CSKKYAVQSDWKAHSKI-CGT  183 (417)
Q Consensus       157 kp~~C~~--C~k~F~~~~~L~~H~~~-~~e  183 (417)
                      |.|.|..  |+..|.....|..|+-. +||
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            4566643  77777777777777665 443

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.51  E-value=0.75  Score=25.29  Aligned_cols=14  Identities=36%  Similarity=0.650  Sum_probs=6.7

Q ss_pred             CCcccCHHHHHHHH
Q 014855          137 SRALGDLTGIKKHF  150 (417)
Q Consensus       137 ~k~f~~~~~L~~H~  150 (417)
                      +|.+++...++.|.
T Consensus         9 gkqlks~~gmkyhv   22 (30)
T d2ctda2           9 GKQLRSLAGMKYHV   22 (30)
T ss_dssp             CCCCSSHHHHHHHH
T ss_pred             HHHHhhccCceEEE
Confidence            44444444444443

>d2czra1 c.52.4.1 (A:1-218) TBP-interacting protein {Thermococcus kodakaraensis [TaxId: 311400]}

class: Alpha and beta proteins (a/b)
fold: Restriction endonuclease-like
superfamily: TBP-interacting protein-like
family: TBP-interacting protein-like
domain: TBP-interacting protein
species: Thermococcus kodakaraensis [TaxId: 311400]

Probab=81.08  E-value=0.3  Score=39.56  Aligned_cols=41  Identities=27%  Similarity=0.590  Sum_probs=30.3

Q ss_pred             HHHHHHHhhcc--CC-----CccccCcCCccccChhhHHHHHHHhCCCc
Q 014855          144 TGIKKHFSRKH--GE-----KKWKCEKCSKKYAVQSDWKAHSKICGTRE  185 (417)
Q Consensus       144 ~~L~~H~~~H~--~e-----kp~~C~~C~k~F~~~~~L~~H~~~~~ekp  185 (417)
                      ..|..|++.-.  |.     .-|+|..||| |..-.+|.+|++.||++.
T Consensus       125 grlieHiK~~m~~GqDyvFWQFYKCe~CgK-YvDie~~~~H~k~HG~~~  172 (218)
T d2czra1         125 AALVNHIKNNALAGQDYIFWQFYKCEECGK-YVDIENLEAHLREHGIKL  172 (218)
T ss_dssp             HHHHHHHHTTCCBTTTEEEEEEEECTTTCC-EEEGGGHHHHHHTTTCCG
T ss_pred             HHHHHHHHhccccCcceEEEEEeehhhcCc-eecHHHHHHHHHHcCcch
Confidence            44777877532  22     2379999998 577889999999988764

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=80.79  E-value=2.1  Score=26.63  Aligned_cols=27  Identities=22%  Similarity=0.378  Sum_probs=23.3

Q ss_pred             CCCCceecccccccccChHHHHHHHHh
Q 014855           78 MATNRFLCEICNKGFQRDQNLQLHRRG  104 (417)
Q Consensus        78 ~~~k~~~C~~Cgk~F~~~~~L~~H~~~  104 (417)
                      ..+.+-.|++|+.......+|++|...
T Consensus        20 ~s~qpatcpic~avirqsrnlrrhlel   46 (54)
T d1yuja_          20 QSEQPATCPICYAVIRQSRNLRRHLEL   46 (54)
T ss_dssp             TTSCCEECTTTCCEESSHHHHHHHHHH
T ss_pred             cccCCCCCchHHHHHHHHHHHHHHHHH
Confidence            345678999999999999999999754