Citrus Sinensis ID: 014892
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 416 | 2.2.26 [Sep-21-2011] | |||||||
| Q8LFG1 | 413 | Probable alpha-amylase 2 | yes | no | 0.992 | 1.0 | 0.812 | 0.0 | |
| Q94A41 | 887 | Alpha-amylase 3, chloropl | no | no | 0.983 | 0.461 | 0.473 | 1e-114 | |
| P17859 | 421 | Alpha-amylase OS=Vigna mu | N/A | no | 0.918 | 0.907 | 0.463 | 1e-102 | |
| P04063 | 427 | Alpha-amylase type B isoz | N/A | no | 0.923 | 0.899 | 0.475 | 1e-101 | |
| A2YGY2 | 446 | Alpha-amylase isozyme 2A | N/A | no | 0.930 | 0.867 | 0.473 | 1e-100 | |
| Q0D9J1 | 445 | Alpha-amylase isozyme 2A | no | no | 0.930 | 0.869 | 0.473 | 1e-100 | |
| P00693 | 438 | Alpha-amylase type A isoz | N/A | no | 0.923 | 0.876 | 0.464 | 1e-99 | |
| P27934 | 437 | Alpha-amylase isozyme 3E | no | no | 0.923 | 0.878 | 0.452 | 9e-99 | |
| P04750 | 429 | Alpha-amylase type B isoz | N/A | no | 0.923 | 0.895 | 0.468 | 6e-98 | |
| P27932 | 440 | Alpha-amylase isozyme 3A | no | no | 0.923 | 0.872 | 0.440 | 2e-97 |
| >sp|Q8LFG1|AMY2_ARATH Probable alpha-amylase 2 OS=Arabidopsis thaliana GN=AMY2 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 731 bits (1888), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/416 (81%), Positives = 382/416 (91%), Gaps = 3/416 (0%)
Query: 1 MDYTSKGFDETNQQTDLVKIRAVIRNGREILFQGFNWESCKHDWWRNLERKVPDISKSGF 60
M Y + FDE N QTD+ + VIR+GRE++ Q +NWES K+DWWRNL+ KVPDI+KSGF
Sbjct: 1 MGYYNNVFDECNDQTDIGR---VIRDGREVILQAYNWESHKYDWWRNLDGKVPDIAKSGF 57
Query: 61 TSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVG 120
TS WLPP + S APEGYLPQ+LYSLNS+YGSEHLLK+LL KMKQ+KVRAMADIVINHRVG
Sbjct: 58 TSAWLPPPSQSLAPEGYLPQDLYSLNSAYGSEHLLKSLLRKMKQYKVRAMADIVINHRVG 117
Query: 121 TTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAW 180
TT+GHGG YNRYDGI L WDEHAVTSCTGGLGN STGDNF+GVPN+DHTQHFVRKDII W
Sbjct: 118 TTRGHGGMYNRYDGISLPWDEHAVTSCTGGLGNRSTGDNFNGVPNVDHTQHFVRKDIIGW 177
Query: 181 LRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGARPIFSVGEYWDSCNYNSHGLDYNQDSH 240
LRWLRNTVGFQDFRFDFARGYSA YVKEYI A+P+FSVGE WDSCNYN HGLDYNQDSH
Sbjct: 178 LRWLRNTVGFQDFRFDFARGYSANYVKEYIGAAKPLFSVGECWDSCNYNGHGLDYNQDSH 237
Query: 241 RQRIINWIDGTGQLSAAFDFTTKGILQEAVKGQFWRLRDAQGKPPGVMGWWPSRAVTFLD 300
RQRII+WID TGQ+SAAFDFTTKGILQEAVKGQ+WRL DAQGKPPGVMGWWPSRAVTFLD
Sbjct: 238 RQRIISWIDATGQISAAFDFTTKGILQEAVKGQYWRLCDAQGKPPGVMGWWPSRAVTFLD 297
Query: 301 NHDTGSTQAHWPFPSNHIMEGYAYILMHPGIPSVFYDHFYDWGDSIHNQIVKLMDVRRQQ 360
NHDTGSTQAHWPFPS+H+MEGYAYIL HPGIP VFYDHFYDWG SIH+QIVKL+D+RR+Q
Sbjct: 298 NHDTGSTQAHWPFPSHHVMEGYAYILTHPGIPCVFYDHFYDWGSSIHDQIVKLIDIRRRQ 357
Query: 361 DIHSRSSIKILEAQSNLYSAIIGDKVCMKIGDGSWCPAGKEWTLATSGHKYAVWHK 416
DIHSRS++++L+A+SNLY+AI+G+K+CMK+GDGSWCP+G++WTLATSGH+YAVWHK
Sbjct: 358 DIHSRSTVRVLKAESNLYAAIVGEKICMKLGDGSWCPSGRDWTLATSGHRYAVWHK 413
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Probable alpha-amylase that does not seem to be required for breakdown of transitory starch in leaves. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 1 |
| >sp|Q94A41|AMY3_ARATH Alpha-amylase 3, chloroplastic OS=Arabidopsis thaliana GN=AMY3 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 412 bits (1060), Expect = e-114, Method: Compositional matrix adjust.
Identities = 199/420 (47%), Positives = 277/420 (65%), Gaps = 11/420 (2%)
Query: 3 YTSKGFDETNQQTDLVKIRAVIRNGREILFQGFNWESCKHD-WWRNLERKVPDISKSGFT 61
++ +G E +KI + +G EIL QGFNWES K W+ L+ K +++ GFT
Sbjct: 470 FSEEGVLEAEADKPDIKISSGTGSGFEILCQGFNWESNKSGRWYLELQEKADELASLGFT 529
Query: 62 SVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGT 121
+WLPP T S +PEGY+P++LY+LNS YG+ LK + K + ++ + D V+NHR
Sbjct: 530 VLWLPPPTESVSPEGYMPKDLYNLNSRYGTIDELKDTVKKFHKVGIKVLGDAVLNHRCAH 589
Query: 122 TQGHGGKYNRYDGIPLSWDEHAVTSCTG---GLGNGSTGDNFHGVPNIDHTQHFVRKDII 178
+ G +N + G L+WD+ AV + G GN S+GDNFH PNIDH+Q FVRKDI
Sbjct: 590 FKNQNGVWNLFGG-RLNWDDRAVVADDPHFQGRGNKSSGDNFHAAPNIDHSQDFVRKDIK 648
Query: 179 AWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGARPIFSVGEYWDSCNYNSHGLDYNQD 238
WL W+ VG+ +R DF RG+ YVK+Y++ ++P F+VGEYWDS +Y +DYNQD
Sbjct: 649 EWLCWMMEEVGYDGWRLDFVRGFWGGYVKDYMDASKPYFAVGEYWDSLSYTYGEMDYNQD 708
Query: 239 SHRQRIINWIDGTGQLSAAFDFTTKGILQEAV-KGQFWRLRDAQGKPPGVMGWWPSRAVT 297
+HRQRI++WI+ T + AFD TTKGIL A+ K ++WRL D +GKPPGV+GWWPSRAVT
Sbjct: 709 AHRQRIVDWINATSGAAGAFDVTTKGILHTALQKCEYWRLSDPKGKPPGVVGWWPSRAVT 768
Query: 298 FLDNHDTGSTQAHWPFPSNHIMEGYAYILMHPGIPSVFYDHFYDWGDSIHNQIVKLMDVR 357
F++NHDTGSTQ HW FP M+GYAYIL HPG P+VF+DH + H++I L+ +R
Sbjct: 769 FIENHDTGSTQGHWRFPEGKEMQGYAYILTHPGTPAVFFDHIF---SDYHSEIAALLSLR 825
Query: 358 RQQDIHSRSSIKILEAQSNLYSAIIGDKVCMKIGDGSWCP--AGKEWTLATSGHKYAVWH 415
+Q +H RS + I +++ ++Y+AII +KV MKIG G + P + W++A G Y VW
Sbjct: 826 NRQKLHCRSEVNIDKSERDVYAAIIDEKVAMKIGPGHYEPPNGSQNWSVAVEGRDYKVWE 885
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Possesses endoamylolytic activity in vitro, but seems not required for breakdown of transitory starch in leaves. May be involved in the determination of the final structure of glucans by shortening long linear phospho-oligosaccharides in the chloroplast stroma. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 1 |
| >sp|P17859|AMYA_VIGMU Alpha-amylase OS=Vigna mungo GN=AMY1.1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 371 bits (953), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/401 (46%), Positives = 262/401 (65%), Gaps = 19/401 (4%)
Query: 30 ILFQGFNWESCKHD-WWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSS 88
+LFQGFNWES K W+ +L+ +PD++ +G T VWLPP + S +PEGYLP LY L++S
Sbjct: 25 LLFQGFNWESSKKGGWYNSLKNSIPDLANAGITHVWLPPPSQSVSPEGYLPGRLYDLDAS 84
Query: 89 -YGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDG-IPLS---WDEHA 143
YGS++ LK+L+ + ++ +ADIVINHR + G Y ++G P S W
Sbjct: 85 KYGSKNELKSLIAAFHEKGIKCLADIVINHRTAERKDGRGIYCIFEGGTPDSRQDWGPSF 144
Query: 144 V----TSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFAR 199
+ T+ + G GN +G+ + P+IDH V++++ W+ WL+ +GF +RFDF +
Sbjct: 145 ICRDDTAYSDGTGNNDSGEGYDAAPDIDHLNPQVQRELSEWMNWLKTEIGFDGWRFDFVK 204
Query: 200 GYSAKYVKEYIEGARPIFSVGEYWDSCNYNSHG-LDYNQDSHRQRIINWIDGTGQLSAAF 258
GY+ K Y+E +P F+VGE WDS +Y G +YNQDSHR ++NW++ G AF
Sbjct: 205 GYAPSISKIYMEQTKPDFAVGEKWDSISYGQDGKPNYNQDSHRGALVNWVESAGGAITAF 264
Query: 259 DFTTKGILQEAVKGQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFPSNHI 318
DFTTKGILQ AV+G+ WRL D GKPPG++G P AVTF+DNHDTGSTQ WPFPS+ +
Sbjct: 265 DFTTKGILQAAVQGELWRLIDPNGKPPGMIGVKPENAVTFIDNHDTGSTQRLWPFPSDKV 324
Query: 319 MEGYAYILMHPGIPSVFYDHFYDWGDSIHNQIVKLMDVRRQQDIHSRSSIKILEAQSNLY 378
M+GYAYIL HPG PS+FYDHF+DWG + QI KL +R + I+ +S++KI+ ++ +LY
Sbjct: 325 MQGYAYILTHPGTPSIFYDHFFDWG--LKEQIAKLSSIRLRNGINEKSTVKIMASEGDLY 382
Query: 379 SAIIGDKVCMKIGD----GSWCPAGKEWTLATSGHKYAVWH 415
A I +K+ +KIG G+ P+ +ATSG YAVW
Sbjct: 383 VAKIDNKIMVKIGPKMDLGNLIPSNLH--VATSGQDYAVWE 421
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Vigna mungo (taxid: 3915) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 1 |
| >sp|P04063|AMY2_HORVU Alpha-amylase type B isozyme OS=Hordeum vulgare GN=AMY1.2 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 369 bits (948), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/406 (47%), Positives = 261/406 (64%), Gaps = 22/406 (5%)
Query: 29 EILFQGFNWESCKHD--WWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLN 86
++LFQGFNWES KH+ W+ L KV DI+ +G T VWLPPA+ S A +GY+P LY L+
Sbjct: 25 QVLFQGFNWESWKHNGGWYNFLMGKVDDIAAAGITHVWLPPASQSVAEQGYMPGRLYDLD 84
Query: 87 SS-YGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDG----IPLSWDE 141
+S YG++ LK+L+ + V+A+ADIVINHR + G Y ++G L W
Sbjct: 85 ASKYGNKAQLKSLIGALHGKGVKAIADIVINHRTAEHKDGRGIYCIFEGGTPDARLDWGP 144
Query: 142 HAVT----SCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDF 197
H + G GN TG +F P+IDH V+K+++ WL WL+ +GF +RFDF
Sbjct: 145 HMICRDDRPYADGTGNPDTGADFGAAPDIDHLNLRVQKELVEWLNWLKADIGFDGWRFDF 204
Query: 198 ARGYSAKYVKEYIEGARPIFSVGEYWDSCNYNSHGL-DYNQDSHRQRIINWIDGTGQLSA 256
A+GYSA K YI+ + P F+V E W S Y G + NQD HRQ ++NW+D G
Sbjct: 205 AKGYSADVAKIYIDRSEPSFAVAEIWTSLAYGGDGKPNLNQDQHRQELVNWVDKVGGKGP 264
Query: 257 A--FDFTTKGILQEAVKGQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFP 314
A FDFTTKGIL AV+G+ WRLR GK PG++GWWP++AVTF+DNHDTGSTQ WPFP
Sbjct: 265 ATTFDFTTKGILNVAVEGELWRLRGTDGKAPGMIGWWPAKAVTFVDNHDTGSTQHMWPFP 324
Query: 315 SNHIMEGYAYILMHPGIPSVFYDHFYDWGDSIHNQIVKLMDVRRQQDIHSRSSIKILEAQ 374
S+ +M+GYAYIL HPG P +FYDHF+DWG + +I +L+ VR + IH+ S ++I+EA
Sbjct: 325 SDRVMQGYAYILTHPGTPCIFYDHFFDWG--LKEEIDRLVSVRTRHGIHNESKLQIIEAD 382
Query: 375 SNLYSAIIGDKVCMKIGD----GSWCPAGKEWTLATSGHKYAVWHK 416
++LY A I KV +K+G G+ P G + +A G+ YAVW K
Sbjct: 383 ADLYLAEIDGKVIVKLGPRYDVGNLIPGG--FKVAAHGNDYAVWEK 426
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Hordeum vulgare (taxid: 4513) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 1 |
| >sp|A2YGY2|AMY2A_ORYSI Alpha-amylase isozyme 2A OS=Oryza sativa subsp. indica GN=AMYC2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 364 bits (935), Expect = e-100, Method: Compositional matrix adjust.
Identities = 195/412 (47%), Positives = 261/412 (63%), Gaps = 25/412 (6%)
Query: 26 NGREILFQGFNWESCKHD--WWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLY 83
+G +ILFQGFNWES + W+ L KV DI +G T VWLPP +HS + +GY+P LY
Sbjct: 20 SGDKILFQGFNWESWRQSGGWYNLLMGKVDDIVAAGVTHVWLPPPSHSVSTQGYMPGRLY 79
Query: 84 SLNSS-YGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDG-IP---LS 138
L++S YG+ LK+L+ + ++A+AD+VINHR + G Y ++G P L
Sbjct: 80 DLDASRYGTSMELKSLISALHGKGIQAIADVVINHRCADYKDSRGIYCIFEGGTPDGRLD 139
Query: 139 WDEHAV----TSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLR-NTVGFQDF 193
W H + T + G GN TG +F P+IDH V++++ WL WL+ + VGF +
Sbjct: 140 WGPHMICRDDTQFSDGTGNLDTGADFAAAPDIDHLNGVVQRELTDWLLWLKSDEVGFDAW 199
Query: 194 RFDFARGYSAKYVKEYIEGARPI-FSVGEYWDSCNYNSHGL-DYNQDSHRQRIINWID-- 249
R DFARGYS + K YIEG P+ +V E WDS Y G +YNQD+HRQ +++W+D
Sbjct: 200 RLDFARGYSPEVAKVYIEGTTPVGLAVAELWDSMAYGGDGKPEYNQDAHRQALVDWVDRV 259
Query: 250 -GTGQLSAAFDFTTKGILQEAVKGQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQ 308
GT FDFTTKGI+ AV+G+ WRL D QGK PGV+GWWP++AVTF+DNHDTGSTQ
Sbjct: 260 GGTASAGMVFDFTTKGIMNTAVEGELWRLIDQQGKAPGVIGWWPAKAVTFVDNHDTGSTQ 319
Query: 309 AHWPFPSNHIMEGYAYILMHPGIPSVFYDHFYDWGDSIHNQIVKLMDVRRQQDIHSRSSI 368
WPFPS+ +M+GYAYIL HPG P +FYDHF+DWG + QI L+ VR++ + + SS+
Sbjct: 320 QMWPFPSDKVMQGYAYILTHPGNPCIFYDHFFDWG--LKEQIAALVAVRQRNGVTATSSL 377
Query: 369 KILEAQSNLYSAIIGDKVCMKIGD----GSWCPAGKEWTLATSGHKYAVWHK 416
KI+ ++ Y A I KV MKIG S P G + LA G+ YAVW K
Sbjct: 378 KIMLHDADAYVAEIDGKVVMKIGSRYDVSSLIPPG--FHLAAHGNGYAVWEK 427
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Important for breakdown of endosperm starch during germination. Oryza sativa subsp. indica (taxid: 39946) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 1 |
| >sp|Q0D9J1|AMY2A_ORYSJ Alpha-amylase isozyme 2A OS=Oryza sativa subsp. japonica GN=AMY2A PE=2 SV=1 | Back alignment and function description |
|---|
Score = 364 bits (935), Expect = e-100, Method: Compositional matrix adjust.
Identities = 195/412 (47%), Positives = 261/412 (63%), Gaps = 25/412 (6%)
Query: 26 NGREILFQGFNWESCKHD--WWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLY 83
+G +ILFQGFNWES + W+ L KV DI +G T VWLPP +HS + +GY+P LY
Sbjct: 20 SGDKILFQGFNWESWRQSGGWYNLLMGKVDDIVAAGVTHVWLPPPSHSVSTQGYMPGRLY 79
Query: 84 SLNSS-YGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDG-IP---LS 138
L++S YG+ LK+L+ + ++A+AD+VINHR + G Y ++G P L
Sbjct: 80 DLDASRYGTSMELKSLISALHGKGIQAIADVVINHRCADYKDSRGIYCIFEGGTPDGRLD 139
Query: 139 WDEHAV----TSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLR-NTVGFQDF 193
W H + T + G GN TG +F P+IDH V++++ WL WL+ + VGF +
Sbjct: 140 WGPHMICRDDTQFSDGTGNLDTGADFAAAPDIDHLNGVVQRELTDWLLWLKSDEVGFDAW 199
Query: 194 RFDFARGYSAKYVKEYIEGARPI-FSVGEYWDSCNYNSHGL-DYNQDSHRQRIINWID-- 249
R DFARGYS + K YIEG P+ +V E WDS Y G +YNQD+HRQ +++W+D
Sbjct: 200 RLDFARGYSPEVAKVYIEGTTPVGLAVAELWDSMAYGGDGKPEYNQDAHRQALVDWVDRV 259
Query: 250 -GTGQLSAAFDFTTKGILQEAVKGQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQ 308
GT FDFTTKGI+ AV+G+ WRL D QGK PGV+GWWP++AVTF+DNHDTGSTQ
Sbjct: 260 GGTASAGMVFDFTTKGIMNTAVEGELWRLIDQQGKAPGVIGWWPAKAVTFVDNHDTGSTQ 319
Query: 309 AHWPFPSNHIMEGYAYILMHPGIPSVFYDHFYDWGDSIHNQIVKLMDVRRQQDIHSRSSI 368
WPFPS+ +M+GYAYIL HPG P +FYDHF+DWG + QI L+ VR++ + + SS+
Sbjct: 320 QMWPFPSDKVMQGYAYILTHPGNPCIFYDHFFDWG--LKEQIAALVAVRQRNGVTATSSL 377
Query: 369 KILEAQSNLYSAIIGDKVCMKIGD----GSWCPAGKEWTLATSGHKYAVWHK 416
KI+ ++ Y A I KV MKIG S P G + LA G+ YAVW K
Sbjct: 378 KIMLHDADAYVAEIDGKVVMKIGSRYDVSSLIPPG--FHLAAHGNGYAVWEK 427
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Important for breakdown of endosperm starch during germination. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 1 |
| >sp|P00693|AMY1_HORVU Alpha-amylase type A isozyme OS=Hordeum vulgare GN=AMY1.1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 363 bits (933), Expect = e-99, Method: Compositional matrix adjust.
Identities = 189/407 (46%), Positives = 260/407 (63%), Gaps = 23/407 (5%)
Query: 29 EILFQGFNWESCKHD--WWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLN 86
++LFQGFNWES K W+ + KV DI+ +G T VWLPP +HS + EGY+P LY ++
Sbjct: 26 QVLFQGFNWESWKQSGGWYNMMMGKVDDIAAAGVTHVWLPPPSHSVSNEGYMPGRLYDID 85
Query: 87 SS-YGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIP----LSWDE 141
+S YG+ LK+L+ + V+A+ADIVINHR + G Y ++G L W
Sbjct: 86 ASKYGNAAELKSLIGALHGKGVQAIADIVINHRCADYKDSRGIYCIFEGGTSDGRLDWGP 145
Query: 142 HAV----TSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDF 197
H + T + G N TG +F P+IDH V++++ WL WL++ +GF +R DF
Sbjct: 146 HMICRDDTKYSDGTANLDTGADFAAAPDIDHLNDRVQRELKEWLLWLKSDLGFDAWRLDF 205
Query: 198 ARGYSAKYVKEYIEGARPIFSVGEYWDSCNYNSHGL-DYNQDSHRQRIINWIDGTGQLSA 256
ARGYS + K YI+G P +V E WD+ G +Y+QD+HRQ ++NW+D G ++
Sbjct: 206 ARGYSPEMAKVYIDGTSPSLAVAEVWDNMATGGDGKPNYDQDAHRQNLVNWVDKVGGAAS 265
Query: 257 A---FDFTTKGILQEAVKGQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPF 313
A FDFTTKGIL AV+G+ WRL D QGK PGVMGWWP++A TF+DNHDTGSTQA WPF
Sbjct: 266 AGMVFDFTTKGILNAAVEGELWRLIDPQGKAPGVMGWWPAKAATFVDNHDTGSTQAMWPF 325
Query: 314 PSNHIMEGYAYILMHPGIPSVFYDHFYDWGDSIHNQIVKLMDVRRQQDIHSRSSIKILEA 373
PS+ +M+GYAYIL HPGIP +FYDHF++WG +QI L+ +R++ I + S++KIL
Sbjct: 326 PSDKVMQGYAYILTHPGIPCIFYDHFFNWG--FKDQIAALVAIRKRNGITATSALKILMH 383
Query: 374 QSNLYSAIIGDKVCMKIGD----GSWCPAGKEWTLATSGHKYAVWHK 416
+ + Y A I KV +KIG G+ PAG + + G+ YAVW K
Sbjct: 384 EGDAYVAEIDGKVVVKIGSRYDVGAVIPAG--FVTSAHGNDYAVWEK 428
|
Hordeum vulgare (taxid: 4513) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 1 |
| >sp|P27934|AMY3E_ORYSJ Alpha-amylase isozyme 3E OS=Oryza sativa subsp. japonica GN=AMY1.4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 360 bits (925), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 183/404 (45%), Positives = 256/404 (63%), Gaps = 20/404 (4%)
Query: 29 EILFQGFNWESCKHD--WWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLN 86
++LFQGFNWES + W+ L KV +I+ +G T VWLPP +HS +P+GY+P LY L+
Sbjct: 26 QVLFQGFNWESWRKQGGWYNFLHEKVEEIASTGATHVWLPPPSHSVSPQGYMPGRLYDLD 85
Query: 87 SS-YGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDG-IP---LSWDE 141
+S YG+E LK+L+ V +ADIVINHR + G Y ++G P L W
Sbjct: 86 ASKYGTEAELKSLIEAFHDKNVECLADIVINHRCADYKDSRGVYCVFEGGTPDGRLDWGP 145
Query: 142 HAV----TSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDF 197
+ T + G G+ TG F P+IDH V++++ WL WLR +GF +R DF
Sbjct: 146 DMICSDDTQYSNGRGHRDTGAGFGAAPDIDHLNPRVQRELTDWLNWLRTDLGFDGWRLDF 205
Query: 198 ARGYSAKYVKEYIEGARPIFSVGEYWDSCNYNSHGL-DYNQDSHRQRIINWIDGTGQLSA 256
A+GYSA + Y++ P F VGE W S YN G NQD+ RQ ++NW++G G+ +
Sbjct: 206 AKGYSAPLARIYVDNTNPTFVVGEIWSSLIYNGDGKPSTNQDADRQELVNWVEGVGKPAT 265
Query: 257 AFDFTTKGILQEAVKGQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFPSN 316
AFDFTTKGILQ AV+G+ WRL D GK PG+MGW P +AVTF+DNHDTGSTQ+ WPFPS+
Sbjct: 266 AFDFTTKGILQAAVQGELWRLHDGNGKAPGLMGWMPDQAVTFVDNHDTGSTQSLWPFPSD 325
Query: 317 HIMEGYAYILMHPGIPSVFYDHFYDWGDSIHNQIVKLMDVRRQQDIHSRSSIKILEAQSN 376
+M+GYAYIL HPGIP +FYDH +DW ++ ++I L ++R + IH+ S++ IL+A+ +
Sbjct: 326 KVMQGYAYILTHPGIPCIFYDHVFDW--NLQHEIATLAEIRSRNGIHAESTLDILKAEGD 383
Query: 377 LYSAIIGDKVCMKIGD----GSWCPAGKEWTLATSGHKYAVWHK 416
+Y A+I KV K+G G P+ ++ + G+ Y VW K
Sbjct: 384 IYVAMIDGKVITKLGPRYDAGGIIPS--DFHVVAHGNDYCVWEK 425
|
Important for breakdown of endosperm starch during germination. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 1 |
| >sp|P04750|AMY6_HORVU Alpha-amylase type B isozyme OS=Hordeum vulgare GN=AMY1.6 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 358 bits (918), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 191/408 (46%), Positives = 258/408 (63%), Gaps = 24/408 (5%)
Query: 29 EILFQGFNWESCKHD--WWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLN 86
++LFQGFNWES KH+ W+ L KV DI+ +G T VWLPPA+ S A +GY+P LY L+
Sbjct: 25 QVLFQGFNWESWKHNGGWYNFLMGKVDDIAAAGVTHVWLPPASQSVAEQGYMPGRLYDLD 84
Query: 87 SS-YGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDG----IPLSWDE 141
+S YG++ LK+L+ + V+A+ADIVINHR + G Y ++G L W
Sbjct: 85 ASKYGNKAQLKSLIGALHGKAVKAIADIVINHRTAERKDGRGIYCIFEGGTPDARLDWGP 144
Query: 142 HAVT----SCTGGLGNGSTGD--NFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRF 195
H + G GN T +F P+IDH V+K+++ WL WLR GF +RF
Sbjct: 145 HMICRDDRPYPDGTGNRPTRTRADFGAAPDIDHLNPRVQKELVEWLNWLRTDDGFDGWRF 204
Query: 196 DFARGYSAKYVKEYIEGARPIFSVGEYWDSCNYNSHGL-DYNQDSHRQRIINWIDGTGQL 254
DFA+GYSA K Y++ + P F+V E W S Y G + NQD HRQ ++NW++ G
Sbjct: 205 DFAKGYSADVAKIYVDRSEPSFAVAEIWTSLAYGGDGKPNLNQDPHRQELVNWVNKVGGS 264
Query: 255 SAA--FDFTTKGILQEAVKGQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWP 312
A FDFTTKGIL AV+G+ WRLR GK PG++GWWP++AVTF+DNHDTGSTQ WP
Sbjct: 265 GPATTFDFTTKGILNVAVEGELWRLRGTDGKAPGMIGWWPAKAVTFVDNHDTGSTQHMWP 324
Query: 313 FPSNHIMEGYAYILMHPGIPSVFYDHFYDWGDSIHNQIVKLMDVRRQQDIHSRSSIKILE 372
FPS+ +M+GYAYIL HPG P +FYDHF+DWG + +I +L+ +R +Q IHS S ++I+E
Sbjct: 325 FPSDRVMQGYAYILTHPGNPCIFYDHFFDWG--LKEEIDRLVSIRTRQGIHSESKLQIME 382
Query: 373 AQSNLYSAIIGDKVCMKIGD----GSWCPAGKEWTLATSGHKYAVWHK 416
A ++LY A I KV +K+G G P G + + G+ YAVW K
Sbjct: 383 ADADLYLAEIEGKVIVKLGPRYDVGHLIPEG--FKVVAHGNDYAVWEK 428
|
Hordeum vulgare (taxid: 4513) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 1 |
| >sp|P27932|AMY3A_ORYSJ Alpha-amylase isozyme 3A OS=Oryza sativa subsp. japonica GN=AMY1.2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 356 bits (913), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 178/404 (44%), Positives = 257/404 (63%), Gaps = 20/404 (4%)
Query: 29 EILFQGFNWESCKHD--WWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLN 86
+ILFQGFNW+S K W+ L+ +V DI+ +G T VWLPP THS +P+GY+P LY LN
Sbjct: 29 QILFQGFNWDSWKKQGGWYNMLKDQVGDIASAGVTHVWLPPPTHSVSPQGYMPGRLYDLN 88
Query: 87 SS-YGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGI----PLSWDE 141
+S YG++ LK+L+ ++ +ADIV+NHR + G Y + G L W
Sbjct: 89 ASKYGTKAELKSLIAAFHAKGIKCVADIVVNHRCADDKDGRGVYCIFKGGGPRGCLDWGP 148
Query: 142 HAV----TSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDF 197
+ T + G G+ TG +F P+IDH V++++ WLRWLR VGF +R DF
Sbjct: 149 SMICCDDTQYSDGTGHRDTGADFAAAPDIDHLNPLVQRELSDWLRWLRRDVGFDGWRLDF 208
Query: 198 ARGYSAKYVKEYIEGARPIFSVGEYWDSCNYNSHGLDY-NQDSHRQRIINWIDGTGQLSA 256
A+GYSA + Y++ ARP F V E W+S +Y+ G NQD RQ ++NW+ G +
Sbjct: 209 AKGYSAAVARTYVQNARPSFVVAEIWNSLSYDGDGKPAANQDGQRQELVNWVKQVGGPAT 268
Query: 257 AFDFTTKGILQEAVKGQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFPSN 316
AFDFTTKGILQ AV+G+ WR+RD GK PG++GW+P +AVTF+DNHDTGSTQ WPFPS+
Sbjct: 269 AFDFTTKGILQSAVQGELWRMRDKDGKAPGMIGWYPEKAVTFVDNHDTGSTQRMWPFPSD 328
Query: 317 HIMEGYAYILMHPGIPSVFYDHFYDWGDSIHNQIVKLMDVRRQQDIHSRSSIKILEAQSN 376
++ GYAYIL HPG+P +FYDH +DW ++ +I L R++ I++ S +++L A+S+
Sbjct: 329 KVILGYAYILTHPGVPCIFYDHVFDW--NLKQEINALAATRKRNGINAGSKLRVLAAESD 386
Query: 377 LYSAIIGDKVCMKIGD----GSWCPAGKEWTLATSGHKYAVWHK 416
+Y A++ ++V KIG G+ P+ ++ + G+ Y VW K
Sbjct: 387 MYVAMVDERVITKIGPRIDVGNIIPS--DFHIVAHGNDYCVWEK 428
|
Important for breakdown of endosperm starch during germination. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 416 | ||||||
| 60652323 | 414 | cytosolic alpha-amylase [Malus x domesti | 0.971 | 0.975 | 0.859 | 0.0 | |
| 7532799 | 413 | alpha-amylase [Malus x domestica] | 0.992 | 1.0 | 0.838 | 0.0 | |
| 224065715 | 406 | predicted protein [Populus trichocarpa] | 0.966 | 0.990 | 0.851 | 0.0 | |
| 15222959 | 413 | alpha-amylase-like 2 [Arabidopsis thalia | 0.992 | 1.0 | 0.812 | 0.0 | |
| 297839489 | 413 | hypothetical protein ARALYDRAFT_316534 [ | 0.992 | 1.0 | 0.817 | 0.0 | |
| 359492943 | 411 | PREDICTED: alpha-amylase type B isozyme- | 0.987 | 1.0 | 0.853 | 0.0 | |
| 147780614 | 397 | hypothetical protein VITISV_031847 [Viti | 0.949 | 0.994 | 0.873 | 0.0 | |
| 255539112 | 398 | alpha-amylase, putative [Ricinus communi | 0.949 | 0.992 | 0.840 | 0.0 | |
| 52851182 | 413 | alpha-amylase [Plantago major] | 0.985 | 0.992 | 0.823 | 0.0 | |
| 6573706 | 412 | T23E18.6 [Arabidopsis thaliana] | 0.990 | 1.0 | 0.800 | 0.0 |
| >gi|60652323|gb|AAX33234.1| cytosolic alpha-amylase [Malus x domestica] | Back alignment and taxonomy information |
|---|
Score = 746 bits (1926), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/407 (85%), Positives = 376/407 (92%), Gaps = 3/407 (0%)
Query: 10 ETNQQTDLVKIRAVIRNGREILFQGFNWESCKHDWWRNLERKVPDISKSGFTSVWLPPAT 69
E QQ D I A +RNGREILFQ FNWES KHDWWRNLE KVPDI +SGFTS WLPPAT
Sbjct: 11 ENAQQND---IGAAVRNGREILFQAFNWESHKHDWWRNLETKVPDIGRSGFTSAWLPPAT 67
Query: 70 HSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKY 129
SFAPEGYLPQ++YSLNS YGSE+L+K+LL KMKQHKVRAMADIVINHRVGTT+GHGG Y
Sbjct: 68 QSFAPEGYLPQDIYSLNSKYGSENLIKSLLQKMKQHKVRAMADIVINHRVGTTRGHGGMY 127
Query: 130 NRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVG 189
NRYDGI LSWDE AVTSCTGGLGN STGDNFHGVPNIDH+Q FVRKDI WL+WLRN VG
Sbjct: 128 NRYDGISLSWDERAVTSCTGGLGNRSTGDNFHGVPNIDHSQPFVRKDITGWLQWLRNNVG 187
Query: 190 FQDFRFDFARGYSAKYVKEYIEGARPIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWID 249
FQDFRFDFARGYSAKYVKEYIEGA+PIFSVGEYWDSCNYN HGLDYNQDSHRQRI+NWI+
Sbjct: 188 FQDFRFDFARGYSAKYVKEYIEGAKPIFSVGEYWDSCNYNDHGLDYNQDSHRQRIVNWIN 247
Query: 250 GTGQLSAAFDFTTKGILQEAVKGQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQA 309
GTGQLS AFDFTTKGILQEAVKGQ WRLRD QGKPPG++GWWPSRAVTFLDNHDTGSTQA
Sbjct: 248 GTGQLSTAFDFTTKGILQEAVKGQLWRLRDPQGKPPGLIGWWPSRAVTFLDNHDTGSTQA 307
Query: 310 HWPFPSNHIMEGYAYILMHPGIPSVFYDHFYDWGDSIHNQIVKLMDVRRQQDIHSRSSIK 369
HWPFPSNHIMEGYAYILMHPGIP+VFYDHFYDWGDSIH+QIVKL+D+R++QDIHSRSSI
Sbjct: 308 HWPFPSNHIMEGYAYILMHPGIPTVFYDHFYDWGDSIHDQIVKLIDIRKRQDIHSRSSIT 367
Query: 370 ILEAQSNLYSAIIGDKVCMKIGDGSWCPAGKEWTLATSGHKYAVWHK 416
ILEAQ NLYSAIIG+K+CMKIGDGSWCPA +EWTLATSGH+YAVW+K
Sbjct: 368 ILEAQPNLYSAIIGEKICMKIGDGSWCPASREWTLATSGHRYAVWNK 414
|
Source: Malus x domestica Species: Malus x domestica Genus: Malus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|7532799|gb|AAF63239.1|AF153828_1 alpha-amylase [Malus x domestica] | Back alignment and taxonomy information |
|---|
Score = 739 bits (1908), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/416 (83%), Positives = 375/416 (90%), Gaps = 3/416 (0%)
Query: 1 MDYTSKGFDETNQQTDLVKIRAVIRNGREILFQGFNWESCKHDWWRNLERKVPDISKSGF 60
M Y S E QQTD I A +RNGREIL Q FNWES KHDWWRNLE KVPDI +SGF
Sbjct: 1 MGYGSNDSRENAQQTD---IGAAVRNGREILLQAFNWESHKHDWWRNLETKVPDIGRSGF 57
Query: 61 TSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVG 120
TS WLPPATHSFAPEGYLPQ++YSLNS YGSE+LL +LLHKMKQHKVRAMADIVINH VG
Sbjct: 58 TSAWLPPATHSFAPEGYLPQDIYSLNSKYGSENLLTSLLHKMKQHKVRAMADIVINHPVG 117
Query: 121 TTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAW 180
TT+GHGGKYNRYDGI LSWDE A TSCTGGLGN STGDNFHGVPNIDH+Q FVRKDI W
Sbjct: 118 TTRGHGGKYNRYDGISLSWDERAATSCTGGLGNPSTGDNFHGVPNIDHSQLFVRKDITGW 177
Query: 181 LRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGARPIFSVGEYWDSCNYNSHGLDYNQDSH 240
L+WLRN VGFQDFRFDFARGYSAKYVKEYIEGA+PIFSVGEYWDSCNYN HGLDY QDSH
Sbjct: 178 LQWLRNNVGFQDFRFDFARGYSAKYVKEYIEGAKPIFSVGEYWDSCNYNGHGLDYTQDSH 237
Query: 241 RQRIINWIDGTGQLSAAFDFTTKGILQEAVKGQFWRLRDAQGKPPGVMGWWPSRAVTFLD 300
RQ I+NWI+GTGQLS AFDFTTKGILQEAVKGQ WRLRD QGKPPGV+GWWPSR+VTFLD
Sbjct: 238 RQPIVNWINGTGQLSTAFDFTTKGILQEAVKGQLWRLRDPQGKPPGVVGWWPSRSVTFLD 297
Query: 301 NHDTGSTQAHWPFPSNHIMEGYAYILMHPGIPSVFYDHFYDWGDSIHNQIVKLMDVRRQQ 360
NHDTGSTQAHWPFP+NHIMEGY YIL HPGIP+VFYDHFYDWGDSIH+QIVKL+D+R++Q
Sbjct: 298 NHDTGSTQAHWPFPTNHIMEGYTYILTHPGIPTVFYDHFYDWGDSIHDQIVKLIDIRKRQ 357
Query: 361 DIHSRSSIKILEAQSNLYSAIIGDKVCMKIGDGSWCPAGKEWTLATSGHKYAVWHK 416
DIHSRSSI ILEAQ NLYSA+IG+KVCMKIGDGSWCPAG+EWTLAT GH+YAVW+K
Sbjct: 358 DIHSRSSITILEAQPNLYSAMIGEKVCMKIGDGSWCPAGREWTLATCGHRYAVWNK 413
|
Source: Malus x domestica Species: Malus x domestica Genus: Malus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224065715|ref|XP_002301935.1| predicted protein [Populus trichocarpa] gi|222843661|gb|EEE81208.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 734 bits (1895), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/405 (85%), Positives = 373/405 (92%), Gaps = 3/405 (0%)
Query: 12 NQQTDLVKIRAVIRNGREILFQGFNWESCKHDWWRNLERKVPDISKSGFTSVWLPPATHS 71
+QQTD AV+R+GREIL Q FNWES KHDWWR LE+KV DI+KSGFT+ WLPP T+S
Sbjct: 5 DQQTD---NGAVLRSGREILLQAFNWESHKHDWWRKLEKKVADIAKSGFTTAWLPPPTNS 61
Query: 72 FAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNR 131
FAPEGYLPQNLY+LNSSYGSE LLKALL KMKQ+ VRAMADIVINHRVGTTQGHGG YNR
Sbjct: 62 FAPEGYLPQNLYNLNSSYGSEQLLKALLEKMKQYNVRAMADIVINHRVGTTQGHGGMYNR 121
Query: 132 YDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQ 191
YDG+PLSWDE AVTSCTGGLGN STGDNF+GVPNIDHTQHFVRKDI AWL+WLR VGFQ
Sbjct: 122 YDGVPLSWDERAVTSCTGGLGNRSTGDNFNGVPNIDHTQHFVRKDITAWLQWLRKNVGFQ 181
Query: 192 DFRFDFARGYSAKYVKEYIEGARPIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGT 251
DFRFDFARGYS KYVKEYIEGA+PIFSVGEYWDSCNYN H L+YNQDSHRQRI+NWID T
Sbjct: 182 DFRFDFARGYSPKYVKEYIEGAKPIFSVGEYWDSCNYNGHFLEYNQDSHRQRIVNWIDLT 241
Query: 252 GQLSAAFDFTTKGILQEAVKGQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHW 311
GQLSAAFDFTTKGILQEAVKGQFWRLRD QGKPPGV+GWWPSRAVTF+DNHDTGSTQAHW
Sbjct: 242 GQLSAAFDFTTKGILQEAVKGQFWRLRDPQGKPPGVLGWWPSRAVTFIDNHDTGSTQAHW 301
Query: 312 PFPSNHIMEGYAYILMHPGIPSVFYDHFYDWGDSIHNQIVKLMDVRRQQDIHSRSSIKIL 371
PFPS+HIMEGYAY+L HPG+P+VFYDHFYDWG+SIH QIVKL+D+R+ QDIHSRSSI+I
Sbjct: 302 PFPSDHIMEGYAYLLTHPGMPTVFYDHFYDWGNSIHEQIVKLIDIRKHQDIHSRSSIRIF 361
Query: 372 EAQSNLYSAIIGDKVCMKIGDGSWCPAGKEWTLATSGHKYAVWHK 416
EAQ NLYSAIIG+KVCMKIGDGSWCPAGKEWTLATSGH+YAVW K
Sbjct: 362 EAQPNLYSAIIGEKVCMKIGDGSWCPAGKEWTLATSGHRYAVWQK 406
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15222959|ref|NP_177740.1| alpha-amylase-like 2 [Arabidopsis thaliana] gi|75301385|sp|Q8LFG1.1|AMY2_ARATH RecName: Full=Probable alpha-amylase 2; Short=AtAMY2; AltName: Full=1,4-alpha-D-glucan glucanohydrolase gi|21537093|gb|AAM61434.1| alpha-amylase, putative [Arabidopsis thaliana] gi|62320476|dbj|BAD94995.1| alpha-amylase like protein [Arabidopsis thaliana] gi|98960989|gb|ABF58978.1| At1g76130 [Arabidopsis thaliana] gi|332197679|gb|AEE35800.1| alpha-amylase-like 2 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 731 bits (1888), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/416 (81%), Positives = 382/416 (91%), Gaps = 3/416 (0%)
Query: 1 MDYTSKGFDETNQQTDLVKIRAVIRNGREILFQGFNWESCKHDWWRNLERKVPDISKSGF 60
M Y + FDE N QTD+ + VIR+GRE++ Q +NWES K+DWWRNL+ KVPDI+KSGF
Sbjct: 1 MGYYNNVFDECNDQTDIGR---VIRDGREVILQAYNWESHKYDWWRNLDGKVPDIAKSGF 57
Query: 61 TSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVG 120
TS WLPP + S APEGYLPQ+LYSLNS+YGSEHLLK+LL KMKQ+KVRAMADIVINHRVG
Sbjct: 58 TSAWLPPPSQSLAPEGYLPQDLYSLNSAYGSEHLLKSLLRKMKQYKVRAMADIVINHRVG 117
Query: 121 TTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAW 180
TT+GHGG YNRYDGI L WDEHAVTSCTGGLGN STGDNF+GVPN+DHTQHFVRKDII W
Sbjct: 118 TTRGHGGMYNRYDGISLPWDEHAVTSCTGGLGNRSTGDNFNGVPNVDHTQHFVRKDIIGW 177
Query: 181 LRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGARPIFSVGEYWDSCNYNSHGLDYNQDSH 240
LRWLRNTVGFQDFRFDFARGYSA YVKEYI A+P+FSVGE WDSCNYN HGLDYNQDSH
Sbjct: 178 LRWLRNTVGFQDFRFDFARGYSANYVKEYIGAAKPLFSVGECWDSCNYNGHGLDYNQDSH 237
Query: 241 RQRIINWIDGTGQLSAAFDFTTKGILQEAVKGQFWRLRDAQGKPPGVMGWWPSRAVTFLD 300
RQRII+WID TGQ+SAAFDFTTKGILQEAVKGQ+WRL DAQGKPPGVMGWWPSRAVTFLD
Sbjct: 238 RQRIISWIDATGQISAAFDFTTKGILQEAVKGQYWRLCDAQGKPPGVMGWWPSRAVTFLD 297
Query: 301 NHDTGSTQAHWPFPSNHIMEGYAYILMHPGIPSVFYDHFYDWGDSIHNQIVKLMDVRRQQ 360
NHDTGSTQAHWPFPS+H+MEGYAYIL HPGIP VFYDHFYDWG SIH+QIVKL+D+RR+Q
Sbjct: 298 NHDTGSTQAHWPFPSHHVMEGYAYILTHPGIPCVFYDHFYDWGSSIHDQIVKLIDIRRRQ 357
Query: 361 DIHSRSSIKILEAQSNLYSAIIGDKVCMKIGDGSWCPAGKEWTLATSGHKYAVWHK 416
DIHSRS++++L+A+SNLY+AI+G+K+CMK+GDGSWCP+G++WTLATSGH+YAVWHK
Sbjct: 358 DIHSRSTVRVLKAESNLYAAIVGEKICMKLGDGSWCPSGRDWTLATSGHRYAVWHK 413
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297839489|ref|XP_002887626.1| hypothetical protein ARALYDRAFT_316534 [Arabidopsis lyrata subsp. lyrata] gi|297333467|gb|EFH63885.1| hypothetical protein ARALYDRAFT_316534 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 731 bits (1886), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/416 (81%), Positives = 381/416 (91%), Gaps = 3/416 (0%)
Query: 1 MDYTSKGFDETNQQTDLVKIRAVIRNGREILFQGFNWESCKHDWWRNLERKVPDISKSGF 60
M Y + FDE N QTD+ + V+R+GRE++ Q +NWES KHDWWRNL+ KVPDI+KSGF
Sbjct: 1 MGYHNNVFDECNDQTDIGR---VLRDGREVILQAYNWESHKHDWWRNLDGKVPDIAKSGF 57
Query: 61 TSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVG 120
TS WLPP + S APEGYLPQ+LYSLNS+YGSEHLLK+LL KMKQ+KVRAMADIVINHRVG
Sbjct: 58 TSAWLPPPSQSLAPEGYLPQDLYSLNSAYGSEHLLKSLLRKMKQYKVRAMADIVINHRVG 117
Query: 121 TTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAW 180
TT+GHGG YNRYDGI L WDEHAVTSCTGGLGN STGDNF+GVPN+DHTQHFVRKDII W
Sbjct: 118 TTRGHGGMYNRYDGISLPWDEHAVTSCTGGLGNRSTGDNFNGVPNVDHTQHFVRKDIIGW 177
Query: 181 LRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGARPIFSVGEYWDSCNYNSHGLDYNQDSH 240
LRWLRNTVGFQDFRFDFARGYSA YVKEYI A+P+FSVGE WDSCNYN HGLDYNQDSH
Sbjct: 178 LRWLRNTVGFQDFRFDFARGYSANYVKEYIGAAKPLFSVGECWDSCNYNGHGLDYNQDSH 237
Query: 241 RQRIINWIDGTGQLSAAFDFTTKGILQEAVKGQFWRLRDAQGKPPGVMGWWPSRAVTFLD 300
RQRII+WID TGQ+SAAFDFTTKGILQEAVKGQ+WRL DAQGKPPGVMGWWPSRAVTFLD
Sbjct: 238 RQRIISWIDATGQISAAFDFTTKGILQEAVKGQYWRLCDAQGKPPGVMGWWPSRAVTFLD 297
Query: 301 NHDTGSTQAHWPFPSNHIMEGYAYILMHPGIPSVFYDHFYDWGDSIHNQIVKLMDVRRQQ 360
NHDTGSTQAHWPFPS+HIMEGYAYIL HPGIP VFYDHFYDWG SIH+QIVKL+D+RR+Q
Sbjct: 298 NHDTGSTQAHWPFPSHHIMEGYAYILTHPGIPCVFYDHFYDWGSSIHDQIVKLIDIRRRQ 357
Query: 361 DIHSRSSIKILEAQSNLYSAIIGDKVCMKIGDGSWCPAGKEWTLATSGHKYAVWHK 416
DIHSRS+I++L+A+SNLY+AI+G+K+CMK+GDGSWCP+G +WTLATSGH+YAVWHK
Sbjct: 358 DIHSRSTIRVLKAESNLYAAIVGEKLCMKLGDGSWCPSGGDWTLATSGHRYAVWHK 413
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359492943|ref|XP_002284805.2| PREDICTED: alpha-amylase type B isozyme-like [Vitis vinifera] gi|302141692|emb|CBI18895.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 730 bits (1885), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/416 (85%), Positives = 382/416 (91%), Gaps = 5/416 (1%)
Query: 1 MDYTSKGFDETNQQTDLVKIRAVIRNGREILFQGFNWESCKHDWWRNLERKVPDISKSGF 60
M Y + GFDE+ QQ+D AV+RNGREIL QGFNWES KHDWWRNLE+KVPD++KSGF
Sbjct: 1 MGYMNNGFDES-QQSDY---GAVLRNGREILLQGFNWESHKHDWWRNLEKKVPDVAKSGF 56
Query: 61 TSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVG 120
TSVWLPPA+ SF+PEGYLPQNLYSLNSSYGSEHLLK LL K+ QHKVRAMADIVINHRVG
Sbjct: 57 TSVWLPPASQSFSPEGYLPQNLYSLNSSYGSEHLLKNLLQKLNQHKVRAMADIVINHRVG 116
Query: 121 TTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAW 180
TTQGHGG YNRYDGIPLSW+EHAVTSCTGGLGN S+G NFHGVPNIDHTQ+FVR D+I W
Sbjct: 117 TTQGHGGMYNRYDGIPLSWNEHAVTSCTGGLGNRSSGANFHGVPNIDHTQNFVRNDLIGW 176
Query: 181 LRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGARPIFSVGEYWDSCNYNSHGLDYNQDSH 240
L+WLR VGFQDFRFDFARGYSAKYVKEYIEGARPIFSVGEYWD CNYN++GLDYNQDSH
Sbjct: 177 LKWLRG-VGFQDFRFDFARGYSAKYVKEYIEGARPIFSVGEYWDPCNYNNNGLDYNQDSH 235
Query: 241 RQRIINWIDGTGQLSAAFDFTTKGILQEAVKGQFWRLRDAQGKPPGVMGWWPSRAVTFLD 300
RQRI+NWIDGTGQLSAAFDFTTKGILQEAVKGQFWRLRD QGKPPGVMGWWPSRAVTF+D
Sbjct: 236 RQRIVNWIDGTGQLSAAFDFTTKGILQEAVKGQFWRLRDRQGKPPGVMGWWPSRAVTFID 295
Query: 301 NHDTGSTQAHWPFPSNHIMEGYAYILMHPGIPSVFYDHFYDWGDSIHNQIVKLMDVRRQQ 360
NHDTGSTQAHWPFP NH+MEGYAYIL HPGIP+VFYDHFYDW SIHN+I KL+ VR++Q
Sbjct: 296 NHDTGSTQAHWPFPMNHLMEGYAYILTHPGIPTVFYDHFYDWAGSIHNEIAKLIAVRKEQ 355
Query: 361 DIHSRSSIKILEAQSNLYSAIIGDKVCMKIGDGSWCPAGKEWTLATSGHKYAVWHK 416
DIHSRSSIKILEAQ NLYSAIIGDKVCMKIGDGSWCP G+EWTLATSG +YAVW K
Sbjct: 356 DIHSRSSIKILEAQPNLYSAIIGDKVCMKIGDGSWCPGGREWTLATSGQRYAVWKK 411
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147780614|emb|CAN69120.1| hypothetical protein VITISV_031847 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 720 bits (1858), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/396 (87%), Positives = 370/396 (93%), Gaps = 1/396 (0%)
Query: 21 RAVIRNGREILFQGFNWESCKHDWWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQ 80
RAV+R GREIL QGFNWES KHDWWRNLE+KVPD++KSGFTSVWLPPA+ SF+PEGYLPQ
Sbjct: 3 RAVLRXGREILLQGFNWESHKHDWWRNLEKKVPDVAKSGFTSVWLPPASQSFSPEGYLPQ 62
Query: 81 NLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWD 140
NLYSLNSSYGSEHLLK LL K+ QHKVRAMADIVINHRVGTTQGHGG YNRYDGIPLSW+
Sbjct: 63 NLYSLNSSYGSEHLLKNLLQKLNQHKVRAMADIVINHRVGTTQGHGGMYNRYDGIPLSWN 122
Query: 141 EHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARG 200
EHAVTSCTGGLGN S+G NFHGVPNIDHTQ+FVR D+I WL+WLR VGFQDFRFDFARG
Sbjct: 123 EHAVTSCTGGLGNRSSGANFHGVPNIDHTQNFVRNDLIGWLKWLRG-VGFQDFRFDFARG 181
Query: 201 YSAKYVKEYIEGARPIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDF 260
YSAKYVKEYIEGARPIFSVGEYWD CNYN++GLDYNQDSHRQRI+NWIDGTGQLSAAFDF
Sbjct: 182 YSAKYVKEYIEGARPIFSVGEYWDPCNYNNNGLDYNQDSHRQRIVNWIDGTGQLSAAFDF 241
Query: 261 TTKGILQEAVKGQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFPSNHIME 320
TTKGILQEAVKGQFWRLRD QGKPPGVMGWWPSRAVTF+DNHDTGSTQAHWPFP NH+ME
Sbjct: 242 TTKGILQEAVKGQFWRLRDRQGKPPGVMGWWPSRAVTFIDNHDTGSTQAHWPFPMNHLME 301
Query: 321 GYAYILMHPGIPSVFYDHFYDWGDSIHNQIVKLMDVRRQQDIHSRSSIKILEAQSNLYSA 380
GYAYIL HPGIP+VFYDHFYDW SIHN+I KL+ VR++QDIHSRSSIKILEAQ NLYSA
Sbjct: 302 GYAYILTHPGIPTVFYDHFYDWAGSIHNEIAKLIAVRKEQDIHSRSSIKILEAQPNLYSA 361
Query: 381 IIGDKVCMKIGDGSWCPAGKEWTLATSGHKYAVWHK 416
IIGDKVCMKIGDGSWCP G+EWTLATSG +YAVW K
Sbjct: 362 IIGDKVCMKIGDGSWCPGGREWTLATSGQRYAVWKK 397
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255539112|ref|XP_002510621.1| alpha-amylase, putative [Ricinus communis] gi|223551322|gb|EEF52808.1| alpha-amylase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/395 (84%), Positives = 365/395 (92%)
Query: 22 AVIRNGREILFQGFNWESCKHDWWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQN 81
A +RNG+EIL Q FNWES KHDWWRNLERKVPDI+KSGFTS WLPP + S +PEGYLPQN
Sbjct: 4 AAVRNGKEILLQAFNWESHKHDWWRNLERKVPDIAKSGFTSAWLPPPSQSLSPEGYLPQN 63
Query: 82 LYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDE 141
LYSLNS YGSEHLLKALL KMKQ+ VRAMADIVINHR+GTT+GHGG YNRYDGIP+ WDE
Sbjct: 64 LYSLNSVYGSEHLLKALLQKMKQYNVRAMADIVINHRIGTTKGHGGMYNRYDGIPIPWDE 123
Query: 142 HAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGY 201
AVT CTGGLGN STGDNF+GVPNIDHTQHFVRKDII WL+WLRN VGFQDFRFDFARGY
Sbjct: 124 RAVTLCTGGLGNRSTGDNFNGVPNIDHTQHFVRKDIIGWLKWLRNVVGFQDFRFDFARGY 183
Query: 202 SAKYVKEYIEGARPIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFT 261
SAKYVKEYIE A+PIFS+GEYWDSCNY+ L+Y+QDSHRQRI+NWID TGQLSAAFDFT
Sbjct: 184 SAKYVKEYIEAAKPIFSIGEYWDSCNYSGTYLEYSQDSHRQRIVNWIDCTGQLSAAFDFT 243
Query: 262 TKGILQEAVKGQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFPSNHIMEG 321
TKGILQEAVKGQ WRLRD++GKPPGVMGWWPSRAVTF+DNHDTGSTQ HWPFPS+HIMEG
Sbjct: 244 TKGILQEAVKGQLWRLRDSKGKPPGVMGWWPSRAVTFIDNHDTGSTQGHWPFPSHHIMEG 303
Query: 322 YAYILMHPGIPSVFYDHFYDWGDSIHNQIVKLMDVRRQQDIHSRSSIKILEAQSNLYSAI 381
YAYIL HPGIP+VFYDHFYDWG+SIH QIVKL+D+R++QDI+SRSSI+ILEAQ NLYSAI
Sbjct: 304 YAYILTHPGIPTVFYDHFYDWGNSIHEQIVKLIDIRKRQDINSRSSIRILEAQPNLYSAI 363
Query: 382 IGDKVCMKIGDGSWCPAGKEWTLATSGHKYAVWHK 416
IG+KVCMKIGDGSW P+G+EWTLATSGH+YAVW K
Sbjct: 364 IGEKVCMKIGDGSWSPSGREWTLATSGHRYAVWQK 398
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|52851182|emb|CAH58639.1| alpha-amylase [Plantago major] | Back alignment and taxonomy information |
|---|
Score = 716 bits (1849), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/414 (82%), Positives = 369/414 (89%), Gaps = 4/414 (0%)
Query: 3 YTSKGFDETNQQTDLVKIRAVIRNGREILFQGFNWESCKHDWWRNLERKVPDISKSGFTS 62
YTS ++ N Q D A I +G+EIL Q FNWES KHDWW+NLE+KVPDI+KSGFTS
Sbjct: 4 YTSNEHEQKNNQIDPA---ASIHSGKEILLQAFNWESHKHDWWKNLEKKVPDIAKSGFTS 60
Query: 63 VWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTT 122
WLPP T+SFAPEGYLPQNLYSLNS+YGSEHLLKALL+KMK HKVRAMADIVINHRVGTT
Sbjct: 61 AWLPPPTNSFAPEGYLPQNLYSLNSAYGSEHLLKALLNKMKTHKVRAMADIVINHRVGTT 120
Query: 123 QGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLR 182
QGH G YNRYDGIPLSW+EHAVTSCTGG GN STGDNF GVPN+DHTQ FVRKDI WLR
Sbjct: 121 QGHNGMYNRYDGIPLSWNEHAVTSCTGGKGNKSTGDNFSGVPNVDHTQPFVRKDIANWLR 180
Query: 183 WLRNTVGFQDFRFDFARGYSAKYVKEYIEGARPIFSVGEYWDSCNYNSHGLDYNQDSHRQ 242
WLR T GF+DFRFDFARGYS KYVKEYIE A+PIFSVGEYWDSCNY L+YNQDSHRQ
Sbjct: 181 WLR-TSGFEDFRFDFARGYSPKYVKEYIESAKPIFSVGEYWDSCNYKGQYLEYNQDSHRQ 239
Query: 243 RIINWIDGTGQLSAAFDFTTKGILQEAVKGQFWRLRDAQGKPPGVMGWWPSRAVTFLDNH 302
R+INWIDGTGQLSAAFDFTTKGILQ+AVKG+ WRLRDAQGKPPGVMGWWPSRAVTFLDNH
Sbjct: 240 RVINWIDGTGQLSAAFDFTTKGILQQAVKGELWRLRDAQGKPPGVMGWWPSRAVTFLDNH 299
Query: 303 DTGSTQAHWPFPSNHIMEGYAYILMHPGIPSVFYDHFYDWGDSIHNQIVKLMDVRRQQDI 362
DTGSTQAHWPFPS+HIMEGYAYIL HPGIPSVFYDHFYDWG +IH+QIVKL+D+R+ Q I
Sbjct: 300 DTGSTQAHWPFPSHHIMEGYAYILTHPGIPSVFYDHFYDWGTAIHDQIVKLIDIRKHQGI 359
Query: 363 HSRSSIKILEAQSNLYSAIIGDKVCMKIGDGSWCPAGKEWTLATSGHKYAVWHK 416
HSRSSI I+EAQ NLY+A IGDKV MKIGDGSWCP+GKEWTLATSGH+YAVW K
Sbjct: 360 HSRSSIHIIEAQPNLYAANIGDKVSMKIGDGSWCPSGKEWTLATSGHRYAVWQK 413
|
Source: Plantago major Species: Plantago major Genus: Plantago Family: Plantaginaceae Order: Lamiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|6573706|gb|AAF17626.1|AC009978_2 T23E18.6 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 712 bits (1839), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/416 (80%), Positives = 374/416 (89%), Gaps = 4/416 (0%)
Query: 1 MDYTSKGFDETNQQTDLVKIRAVIRNGREILFQGFNWESCKHDWWRNLERKVPDISKSGF 60
M Y + FDE N QTD+ +A L +NWES K+DWWRNL+ KVPDI+KSGF
Sbjct: 1 MGYYNNVFDECNDQTDIGNNKAFNIG----LSLAYNWESHKYDWWRNLDGKVPDIAKSGF 56
Query: 61 TSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVG 120
TS WLPP + S APEGYLPQ+LYSLNS+YGSEHLLK+LL KMKQ+KVRAMADIVINHRVG
Sbjct: 57 TSAWLPPPSQSLAPEGYLPQDLYSLNSAYGSEHLLKSLLRKMKQYKVRAMADIVINHRVG 116
Query: 121 TTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAW 180
TT+GHGG YNRYDGI L WDEHAVTSCTGGLGN STGDNF+GVPN+DHTQHFVRKDII W
Sbjct: 117 TTRGHGGMYNRYDGISLPWDEHAVTSCTGGLGNRSTGDNFNGVPNVDHTQHFVRKDIIGW 176
Query: 181 LRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGARPIFSVGEYWDSCNYNSHGLDYNQDSH 240
LRWLRNTVGFQDFRFDFARGYSA YVKEYI A+P+FSVGE WDSCNYN HGLDYNQDSH
Sbjct: 177 LRWLRNTVGFQDFRFDFARGYSANYVKEYIGAAKPLFSVGECWDSCNYNGHGLDYNQDSH 236
Query: 241 RQRIINWIDGTGQLSAAFDFTTKGILQEAVKGQFWRLRDAQGKPPGVMGWWPSRAVTFLD 300
RQRII+WID TGQ+SAAFDFTTKGILQEAVKGQ+WRL DAQGKPPGVMGWWPSRAVTFLD
Sbjct: 237 RQRIISWIDATGQISAAFDFTTKGILQEAVKGQYWRLCDAQGKPPGVMGWWPSRAVTFLD 296
Query: 301 NHDTGSTQAHWPFPSNHIMEGYAYILMHPGIPSVFYDHFYDWGDSIHNQIVKLMDVRRQQ 360
NHDTGSTQAHWPFPS+H+MEGYAYIL HPGIP VFYDHFYDWG SIH+QIVKL+D+RR+Q
Sbjct: 297 NHDTGSTQAHWPFPSHHVMEGYAYILTHPGIPCVFYDHFYDWGSSIHDQIVKLIDIRRRQ 356
Query: 361 DIHSRSSIKILEAQSNLYSAIIGDKVCMKIGDGSWCPAGKEWTLATSGHKYAVWHK 416
DIHSRS++++L+A+SNLY+AI+G+K+CMK+GDGSWCP+G++WTLATSGH+YAVWHK
Sbjct: 357 DIHSRSTVRVLKAESNLYAAIVGEKICMKLGDGSWCPSGRDWTLATSGHRYAVWHK 412
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 416 | ||||||
| TAIR|locus:2199808 | 413 | AMY2 "alpha-amylase-like 2" [A | 0.992 | 1.0 | 0.812 | 1.7e-201 | |
| TAIR|locus:2196759 | 887 | AMY3 "alpha-amylase-like 3" [A | 0.980 | 0.459 | 0.474 | 6.1e-110 | |
| UNIPROTKB|P27934 | 437 | AMY1.4 "Alpha-amylase isozyme | 0.923 | 0.878 | 0.452 | 2.5e-97 | |
| UNIPROTKB|P17654 | 434 | AMY1.1 "Alpha-amylase" [Oryza | 0.923 | 0.884 | 0.460 | 1.6e-95 | |
| UNIPROTKB|P27932 | 440 | AMY1.2 "Alpha-amylase isozyme | 0.923 | 0.872 | 0.443 | 1.4e-94 | |
| UNIPROTKB|P27937 | 438 | AMY1.6 "Alpha-amylase isozyme | 0.923 | 0.876 | 0.440 | 5.5e-93 | |
| UNIPROTKB|P27933 | 436 | AMY1.3 "Alpha-amylase isozyme | 0.923 | 0.880 | 0.438 | 1.1e-92 | |
| UNIPROTKB|P27939 | 437 | AMY1.7 "Alpha-amylase isozyme | 0.923 | 0.878 | 0.440 | 2.4e-92 | |
| TAIR|locus:2117398 | 423 | AMY1 "alpha-amylase-like" [Ara | 0.906 | 0.891 | 0.463 | 1.3e-91 | |
| UNIPROTKB|P26612 | 495 | amyA "alpha-amylase" [Escheric | 0.384 | 0.323 | 0.315 | 4.5e-14 |
| TAIR|locus:2199808 AMY2 "alpha-amylase-like 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1950 (691.5 bits), Expect = 1.7e-201, P = 1.7e-201
Identities = 338/416 (81%), Positives = 382/416 (91%)
Query: 1 MDYTSKGFDETNQQTDLVKIRAVIRNGREILFQGFNWESCKHDWWRNLERKVPDISKSGF 60
M Y + FDE N QTD+ + VIR+GRE++ Q +NWES K+DWWRNL+ KVPDI+KSGF
Sbjct: 1 MGYYNNVFDECNDQTDIGR---VIRDGREVILQAYNWESHKYDWWRNLDGKVPDIAKSGF 57
Query: 61 TSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVG 120
TS WLPP + S APEGYLPQ+LYSLNS+YGSEHLLK+LL KMKQ+KVRAMADIVINHRVG
Sbjct: 58 TSAWLPPPSQSLAPEGYLPQDLYSLNSAYGSEHLLKSLLRKMKQYKVRAMADIVINHRVG 117
Query: 121 TTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAW 180
TT+GHGG YNRYDGI L WDEHAVTSCTGGLGN STGDNF+GVPN+DHTQHFVRKDII W
Sbjct: 118 TTRGHGGMYNRYDGISLPWDEHAVTSCTGGLGNRSTGDNFNGVPNVDHTQHFVRKDIIGW 177
Query: 181 LRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGARPIFSVGEYWDSCNYNSHGLDYNQDSH 240
LRWLRNTVGFQDFRFDFARGYSA YVKEYI A+P+FSVGE WDSCNYN HGLDYNQDSH
Sbjct: 178 LRWLRNTVGFQDFRFDFARGYSANYVKEYIGAAKPLFSVGECWDSCNYNGHGLDYNQDSH 237
Query: 241 RQRIINWIDGTGQLSAAFDFTTKGILQEAVKGQFWRLRDAQGKPPGVMGWWPSRAVTFLD 300
RQRII+WID TGQ+SAAFDFTTKGILQEAVKGQ+WRL DAQGKPPGVMGWWPSRAVTFLD
Sbjct: 238 RQRIISWIDATGQISAAFDFTTKGILQEAVKGQYWRLCDAQGKPPGVMGWWPSRAVTFLD 297
Query: 301 NHDTGSTQAHWPFPSNHIMEGYAYILMHPGIPSVFYDHFYDWGDSIHNQIVKLMDVRRQQ 360
NHDTGSTQAHWPFPS+H+MEGYAYIL HPGIP VFYDHFYDWG SIH+QIVKL+D+RR+Q
Sbjct: 298 NHDTGSTQAHWPFPSHHVMEGYAYILTHPGIPCVFYDHFYDWGSSIHDQIVKLIDIRRRQ 357
Query: 361 DIHSRSSIKILEAQSNLYSAIIGDKVCMKIGDGSWCPAGKEWTLATSGHKYAVWHK 416
DIHSRS++++L+A+SNLY+AI+G+K+CMK+GDGSWCP+G++WTLATSGH+YAVWHK
Sbjct: 358 DIHSRSTVRVLKAESNLYAAIVGEKICMKLGDGSWCPSGRDWTLATSGHRYAVWHK 413
|
|
| TAIR|locus:2196759 AMY3 "alpha-amylase-like 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1086 (387.4 bits), Expect = 6.1e-110, P = 6.1e-110
Identities = 199/419 (47%), Positives = 277/419 (66%)
Query: 3 YTSKGFDETNQQTDLVKIRAVIRNGREILFQGFNWESCKHD-WWRNLERKVPDISKSGFT 61
++ +G E +KI + +G EIL QGFNWES K W+ L+ K +++ GFT
Sbjct: 470 FSEEGVLEAEADKPDIKISSGTGSGFEILCQGFNWESNKSGRWYLELQEKADELASLGFT 529
Query: 62 SVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGT 121
+WLPP T S +PEGY+P++LY+LNS YG+ LK + K + ++ + D V+NHR
Sbjct: 530 VLWLPPPTESVSPEGYMPKDLYNLNSRYGTIDELKDTVKKFHKVGIKVLGDAVLNHRCAH 589
Query: 122 TQGHGGKYNRYDGIPLSWDEHAVTSCTG---GLGNGSTGDNFHGVPNIDHTQHFVRKDII 178
+ G +N + G L+WD+ AV + G GN S+GDNFH PNIDH+Q FVRKDI
Sbjct: 590 FKNQNGVWNLFGG-RLNWDDRAVVADDPHFQGRGNKSSGDNFHAAPNIDHSQDFVRKDIK 648
Query: 179 AWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGARPIFSVGEYWDSCNYNSHGLDYNQD 238
WL W+ VG+ +R DF RG+ YVK+Y++ ++P F+VGEYWDS +Y +DYNQD
Sbjct: 649 EWLCWMMEEVGYDGWRLDFVRGFWGGYVKDYMDASKPYFAVGEYWDSLSYTYGEMDYNQD 708
Query: 239 SHRQRIINWIDGTGQLSAAFDFTTKGILQEAV-KGQFWRLRDAQGKPPGVMGWWPSRAVT 297
+HRQRI++WI+ T + AFD TTKGIL A+ K ++WRL D +GKPPGV+GWWPSRAVT
Sbjct: 709 AHRQRIVDWINATSGAAGAFDVTTKGILHTALQKCEYWRLSDPKGKPPGVVGWWPSRAVT 768
Query: 298 FLDNHDTGSTQAHWPFPSNHIMEGYAYILMHPGIPSVFYDHFYDWGDSIHNQIVKLMDVR 357
F++NHDTGSTQ HW FP M+GYAYIL HPG P+VF+DH + H++I L+ +R
Sbjct: 769 FIENHDTGSTQGHWRFPEGKEMQGYAYILTHPGTPAVFFDHIFS---DYHSEIAALLSLR 825
Query: 358 RQQDIHSRSSIKILEAQSNLYSAIIGDKVCMKIGDGSWCP--AGKEWTLATSGHKYAVW 414
+Q +H RS + I +++ ++Y+AII +KV MKIG G + P + W++A G Y VW
Sbjct: 826 NRQKLHCRSEVNIDKSERDVYAAIIDEKVAMKIGPGHYEPPNGSQNWSVAVEGRDYKVW 884
|
|
| UNIPROTKB|P27934 AMY1.4 "Alpha-amylase isozyme 3E" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
Score = 967 (345.5 bits), Expect = 2.5e-97, P = 2.5e-97
Identities = 183/404 (45%), Positives = 256/404 (63%)
Query: 29 EILFQGFNWESCKHD--WWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLN 86
++LFQGFNWES + W+ L KV +I+ +G T VWLPP +HS +P+GY+P LY L+
Sbjct: 26 QVLFQGFNWESWRKQGGWYNFLHEKVEEIASTGATHVWLPPPSHSVSPQGYMPGRLYDLD 85
Query: 87 SS-YGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDG-IP---LSWDE 141
+S YG+E LK+L+ V +ADIVINHR + G Y ++G P L W
Sbjct: 86 ASKYGTEAELKSLIEAFHDKNVECLADIVINHRCADYKDSRGVYCVFEGGTPDGRLDWGP 145
Query: 142 HAV----TSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDF 197
+ T + G G+ TG F P+IDH V++++ WL WLR +GF +R DF
Sbjct: 146 DMICSDDTQYSNGRGHRDTGAGFGAAPDIDHLNPRVQRELTDWLNWLRTDLGFDGWRLDF 205
Query: 198 ARGYSAKYVKEYIEGARPIFSVGEYWDSCNYNSHGL-DYNQDSHRQRIINWIDGTGQLSA 256
A+GYSA + Y++ P F VGE W S YN G NQD+ RQ ++NW++G G+ +
Sbjct: 206 AKGYSAPLARIYVDNTNPTFVVGEIWSSLIYNGDGKPSTNQDADRQELVNWVEGVGKPAT 265
Query: 257 AFDFTTKGILQEAVKGQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFPSN 316
AFDFTTKGILQ AV+G+ WRL D GK PG+MGW P +AVTF+DNHDTGSTQ+ WPFPS+
Sbjct: 266 AFDFTTKGILQAAVQGELWRLHDGNGKAPGLMGWMPDQAVTFVDNHDTGSTQSLWPFPSD 325
Query: 317 HIMEGYAYILMHPGIPSVFYDHFYDWGDSIHNQIVKLMDVRRQQDIHSRSSIKILEAQSN 376
+M+GYAYIL HPGIP +FYDH +DW ++ ++I L ++R + IH+ S++ IL+A+ +
Sbjct: 326 KVMQGYAYILTHPGIPCIFYDHVFDW--NLQHEIATLAEIRSRNGIHAESTLDILKAEGD 383
Query: 377 LYSAIIGDKVCMKIGD----GSWCPAGKEWTLATSGHKYAVWHK 416
+Y A+I KV K+G G P+ ++ + G+ Y VW K
Sbjct: 384 IYVAMIDGKVITKLGPRYDAGGIIPS--DFHVVAHGNDYCVWEK 425
|
|
| UNIPROTKB|P17654 AMY1.1 "Alpha-amylase" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
Score = 950 (339.5 bits), Expect = 1.6e-95, P = 1.6e-95
Identities = 187/406 (46%), Positives = 252/406 (62%)
Query: 29 EILFQGFNWESCKHD--WWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLN 86
++LFQGFNWES K + W+ L KV DI+ +G T VWLPP +HS +GY+P LY L+
Sbjct: 32 QVLFQGFNWESWKENGGWYNFLMGKVDDIAAAGITHVWLPPPSHSVGEQGYMPGRLYDLD 91
Query: 87 SS-YGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDG-IP---LSWDE 141
+S YG+E LK+L+ V+ +ADIVINHR + G Y ++G P L W
Sbjct: 92 ASKYGNEAQLKSLIEAFHGKGVQVIADIVINHRTAEHKDGRGIYCLFEGGTPDSRLDWGP 151
Query: 142 HAVTSCT---GGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFA 198
H + G GN TG +F P+IDH V++++I WL WL+ +GF +R DFA
Sbjct: 152 HMICRDDPYGDGTGNPDTGADFAAAPDIDHLNKRVQRELIGWLDWLKMDIGFDAWRLDFA 211
Query: 199 RGYSAKYVKEYIEGARPIFSVGEYWDSCNYNSHGL-DYNQDSHRQRIINWID---GTGQL 254
+GYSA K YI+ P F+V E W S G +Y+Q++HRQ ++NW+D G
Sbjct: 212 KGYSADMAKIYIDATEPSFAVAEIWTSMANGGDGKPNYDQNAHRQELVNWVDRVGGANSN 271
Query: 255 SAAFDFTTKGILQEAVKGQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFP 314
+ AFDFTTKGIL AV+G+ WRLR GK PG++GWWP++A TF+DNHDTGSTQ WPFP
Sbjct: 272 ATAFDFTTKGILNVAVEGELWRLRGEDGKAPGMIGWWPAKATTFVDNHDTGSTQHLWPFP 331
Query: 315 SNHIMEGYAYILMHPGIPSVFYDHFYDWGDSIHNQIVKLMDVRRQQDIHSRSSIKILEAQ 374
S+ +M+GYAYIL HPG P +FYDHF+DWG + +I +L+ +R +Q IH S ++I+EA
Sbjct: 332 SDKVMQGYAYILTHPGNPCIFYDHFFDWG--LKEEIERLVSIRNRQGIHPASELRIMEAD 389
Query: 375 SNLYSAIIGDKVCMKIGDG----SWCPAGKEWTLATSGHKYAVWHK 416
S+LY A I KV KIG P G + + G YA+W K
Sbjct: 390 SDLYLAEIDGKVITKIGPRYDVEHLIPEG--FQVVAHGDGYAIWEK 433
|
|
| UNIPROTKB|P27932 AMY1.2 "Alpha-amylase isozyme 3A" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
Score = 941 (336.3 bits), Expect = 1.4e-94, P = 1.4e-94
Identities = 179/404 (44%), Positives = 258/404 (63%)
Query: 29 EILFQGFNWESCKHD--WWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLN 86
+ILFQGFNW+S K W+ L+ +V DI+ +G T VWLPP THS +P+GY+P LY LN
Sbjct: 29 QILFQGFNWDSWKKQGGWYNMLKDQVGDIASAGVTHVWLPPPTHSVSPQGYMPGRLYDLN 88
Query: 87 SS-YGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGI-P---LSWDE 141
+S YG++ LK+L+ ++ +ADIV+NHR + G Y + G P L W
Sbjct: 89 ASKYGTKAELKSLIAAFHAKGIKCVADIVVNHRCADDKDGRGVYCIFKGGGPRGCLDWGP 148
Query: 142 HAV----TSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDF 197
+ T + G G+ TG +F P+IDH V++++ WLRWLR VGF +R DF
Sbjct: 149 SMICCDDTQYSDGTGHRDTGADFAAAPDIDHLNPLVQRELSDWLRWLRRDVGFDGWRLDF 208
Query: 198 ARGYSAKYVKEYIEGARPIFSVGEYWDSCNYNSHGLDY-NQDSHRQRIINWIDGTGQLSA 256
A+GYSA + Y++ ARP F V E W+S +Y+ G NQD RQ ++NW+ G +
Sbjct: 209 AKGYSAAVARTYVQNARPSFVVAEIWNSLSYDGDGKPAANQDGQRQELVNWVKQVGGPAT 268
Query: 257 AFDFTTKGILQEAVKGQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFPSN 316
AFDFTTKGILQ AV+G+ WR+RD GK PG++GW+P +AVTF+DNHDTGSTQ WPFPS+
Sbjct: 269 AFDFTTKGILQSAVQGELWRMRDKDGKAPGMIGWYPEKAVTFVDNHDTGSTQRMWPFPSD 328
Query: 317 HIMEGYAYILMHPGIPSVFYDHFYDWGDSIHNQIVKLMDVRRQQDIHSRSSIKILEAQSN 376
++ GYAYIL HPG+P +FYDH +DW ++ +I L R++ I++ S +++L A+S+
Sbjct: 329 KVILGYAYILTHPGVPCIFYDHVFDW--NLKQEINALAATRKRNGINAGSKLRVLAAESD 386
Query: 377 LYSAIIGDKVCMKIGD----GSWCPAGKEWTLATSGHKYAVWHK 416
+Y A++ ++V KIG G+ P+ ++ + G+ Y VW K
Sbjct: 387 MYVAMVDERVITKIGPRIDVGNIIPS--DFHIVAHGNDYCVWEK 428
|
|
| UNIPROTKB|P27937 AMY1.6 "Alpha-amylase isozyme 3B" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
Score = 926 (331.0 bits), Expect = 5.5e-93, P = 5.5e-93
Identities = 178/404 (44%), Positives = 251/404 (62%)
Query: 29 EILFQGFNWESCKHD--WWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLN 86
++LFQGFNWES K W+ L V DI+ +G T VWLPP +HS AP+GY+P LY L+
Sbjct: 27 QVLFQGFNWESWKKQGGWYNFLHGHVDDIAATGVTHVWLPPPSHSVAPQGYMPGRLYDLD 86
Query: 87 SS-YGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDG-IP---LSWDE 141
+S YG+ L++L+ ++ +ADIVINHR + G Y ++G P L W
Sbjct: 87 ASKYGTGAELRSLIAAFHSKGIKCVADIVINHRCADYKDSRGIYCIFEGGTPDSRLDWGP 146
Query: 142 HAV----TSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDF 197
+ T + G G+ TG +F P+IDH V+ ++ WL WL++ VGF +R DF
Sbjct: 147 DMICSDDTQYSNGRGHRDTGADFGAAPDIDHLNTRVQTELSDWLNWLKSDVGFDGWRLDF 206
Query: 198 ARGYSAKYVKEYIEGARPIFSVGEYWDSCNYNSHGL-DYNQDSHRQRIINWIDGTGQLSA 256
A+GYSA K Y++ P F V E W + Y+ +G +NQD RQ ++NW G ++
Sbjct: 207 AKGYSAAVAKTYVDNTDPSFVVAEIWSNMRYDGNGEPSWNQDGDRQELVNWAQAVGGPAS 266
Query: 257 AFDFTTKGILQEAVKGQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFPSN 316
AFDFTTKG LQ AV+G+ WR++D GK PG++GW P +AVTF+DNHDTGSTQ WPFPS+
Sbjct: 267 AFDFTTKGELQAAVQGELWRMKDGNGKAPGMIGWLPEKAVTFIDNHDTGSTQNSWPFPSD 326
Query: 317 HIMEGYAYILMHPGIPSVFYDHFYDWGDSIHNQIVKLMDVRRQQDIHSRSSIKILEAQSN 376
+M+GYAYIL HPG+P +FYDH +DW ++ +I L VR + +IH S +KIL A+ +
Sbjct: 327 KVMQGYAYILTHPGVPCIFYDHVFDW--NLKQEISTLAAVRSRNEIHPGSKLKILAAEGD 384
Query: 377 LYSAIIGDKVCMKIGD----GSWCPAGKEWTLATSGHKYAVWHK 416
+Y A+I DKV KIG G+ P+ ++ + G+ Y +W K
Sbjct: 385 VYVAMIDDKVITKIGTRYDVGNLIPS--DFHVVAHGNNYCIWEK 426
|
|
| UNIPROTKB|P27933 AMY1.3 "Alpha-amylase isozyme 3D" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
Score = 923 (330.0 bits), Expect = 1.1e-92, P = 1.1e-92
Identities = 177/404 (43%), Positives = 253/404 (62%)
Query: 29 EILFQGFNWESCKHD--WWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLN 86
++LFQGFNWES K W+ L+ +V DI+K+G T VWLPP +HS AP+GY+P LY L+
Sbjct: 26 QVLFQGFNWESWKQQGGWYNMLKGQVDDIAKAGVTHVWLPPPSHSVAPQGYMPGRLYDLD 85
Query: 87 SS-YGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDG-IP---LSWDE 141
+S YG+ LK+L+ V+ +AD+VINHR + G Y ++G P L W
Sbjct: 86 ASKYGTAAELKSLIAAFHGKGVQCVADVVINHRCAEKKDARGVYCVFEGGTPDDRLDWGP 145
Query: 142 HAV----TSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDF 197
+ T + G G+ TG+ F P+IDH V++++ WL WL++ VGF +R DF
Sbjct: 146 GMICSDDTQYSDGTGHRDTGEGFGAAPDIDHLNPRVQRELTDWLNWLKSDVGFDGWRLDF 205
Query: 198 ARGYSAKYVKEYIEGARPIFSVGEYWDSCNYNSHGLDY-NQDSHRQRIINWIDGTGQLSA 256
A+GYS K Y+E +P F V E W+S +YN G NQD RQ ++NW++ G +
Sbjct: 206 AKGYSTDIAKMYVESCKPGFVVAEIWNSLSYNGDGKPAANQDQGRQELVNWVNAVGGPAM 265
Query: 257 AFDFTTKGILQEAVKGQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFPSN 316
FDFTTKG+LQ V+G+ WRLRD GK G++GW P +AVTF+DNHDTGSTQ WPFPS+
Sbjct: 266 TFDFTTKGLLQAGVQGELWRLRDGNGKAAGMIGWLPEKAVTFVDNHDTGSTQKLWPFPSD 325
Query: 317 HIMEGYAYILMHPGIPSVFYDHFYDWGDSIHNQIVKLMDVRRQQDIHSRSSIKILEAQSN 376
+M+GYAYIL HPG+P +FYDH +DW ++ +I L +R + I++ S ++I+ A ++
Sbjct: 326 KVMQGYAYILTHPGVPCIFYDHMFDW--NLKQEITALAAIRERNGINAGSKLRIVVADAD 383
Query: 377 LYSAIIGDKVCMKIGD----GSWCPAGKEWTLATSGHKYAVWHK 416
Y A++ +KV +KIG G+ P+ T+ G Y+VW K
Sbjct: 384 AYVAVVDEKVMVKIGTRYDVGNAVPSDFHQTV--HGKDYSVWEK 425
|
|
| UNIPROTKB|P27939 AMY1.7 "Alpha-amylase isozyme 3C" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
Score = 920 (328.9 bits), Expect = 2.4e-92, P = 2.4e-92
Identities = 178/404 (44%), Positives = 248/404 (61%)
Query: 29 EILFQGFNWESCKHD--WWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLN 86
++LFQGFNWES K W+ L V DI+ +G T VWLPP +HS AP+GY+P LY L+
Sbjct: 27 QVLFQGFNWESWKKQGGWYNFLHSHVDDIAATGVTHVWLPPPSHSVAPQGYMPGRLYDLD 86
Query: 87 SS-YGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDG-IP---LSWDE 141
+S YG+ L++L+ ++ +ADIVINHR + G Y ++G P L W
Sbjct: 87 ASKYGTGAELRSLIAAFHSKSIKCVADIVINHRCADYKDSRGIYCIFEGGTPDSRLDWGP 146
Query: 142 HAV----TSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDF 197
+ T + G G+ TG +F P+IDH V+ ++ WL WL++ VGF +R DF
Sbjct: 147 DMICSDDTQYSNGRGHRDTGADFGAAPDIDHLNTRVQTELSDWLNWLKSDVGFDGWRLDF 206
Query: 198 ARGYSAKYVKEYIEGARPIFSVGEYWDSCNYNSHGL-DYNQDSHRQRIINWIDGTGQLSA 256
A+GYSA K Y++ P F V E W + Y+ +G +NQD RQ ++NW G ++
Sbjct: 207 AKGYSATVAKTYVDNTDPSFVVAEIWSNMRYDGNGEPSWNQDGDRQELVNWAQAVGGPAS 266
Query: 257 AFDFTTKGILQEAVKGQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFPSN 316
AFDFTTKG LQ AV+G+ WR++D GK PG++GW P +AVTF+DNHDTGSTQ WPFPS+
Sbjct: 267 AFDFTTKGELQAAVQGELWRMKDGNGKAPGMIGWLPEKAVTFIDNHDTGSTQNSWPFPSD 326
Query: 317 HIMEGYAYILMHPGIPSVFYDHFYDWGDSIHNQIVKLMDVRRQQDIHSRSSIKILEAQSN 376
+M+GYAYIL HPG+P +FYDH +DW ++ +I L VR + IH S + IL A +
Sbjct: 327 KVMQGYAYILTHPGVPCIFYDHVFDW--NLKQEISTLAAVRSRNGIHPGSKLNILAADGD 384
Query: 377 LYSAIIGDKVCMKIGD----GSWCPAGKEWTLATSGHKYAVWHK 416
+Y A+I DKV KIG G+ P+ ++ + G+ Y VW K
Sbjct: 385 VYVAMIDDKVITKIGTRYDVGNLIPS--DFHVVAHGNNYCVWEK 426
|
|
| TAIR|locus:2117398 AMY1 "alpha-amylase-like" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 913 (326.5 bits), Expect = 1.3e-91, P = 1.3e-91
Identities = 188/406 (46%), Positives = 253/406 (62%)
Query: 30 ILFQGFNWESCKHD--WWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNS 87
+LFQ FNWES K + ++ +L + DI+ +G T +WLPP + S APEGYLP LY LNS
Sbjct: 27 LLFQSFNWESWKKEGGFYNSLHNSIDDIANAGITHLWLPPPSQSVAPEGYLPGKLYDLNS 86
Query: 88 S-YGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIP----LSWDEH 142
S YGSE LK+L+ + Q ++A+ADIVINHR + Y ++G L WD
Sbjct: 87 SKYGSEAELKSLIKALNQKGIKALADIVINHRTAERKDDKCGYCYFEGGTSDDRLDWDPS 146
Query: 143 AVTSCTG-----GLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDF 197
V C G GN TG +F G P+IDH V+K++ W+ WL+ +GF +RFD+
Sbjct: 147 FV--CRNDPKFPGTGNLDTGGDFDGAPDIDHLNPRVQKELSEWMNWLKTEIGFHGWRFDY 204
Query: 198 ARGYSAKYVKEYIEGARPIFSVGEYWDSCNYNSHG-LDYNQDSHRQRIINWID--GTGQL 254
RGY++ K Y++ P F+VGE WD Y G LDY+Q+ HR + WI+ G G L
Sbjct: 205 VRGYASSITKLYVQNTSPDFAVGEKWDDMKYGGDGKLDYDQNEHRSGLKQWIEEAGGGVL 264
Query: 255 SAAFDFTTKGILQEAVKGQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFP 314
+A FDFTTKGILQ AVKG+ WRL+D+QGKPPG++G P AVTF+DNHDT T W FP
Sbjct: 265 TA-FDFTTKGILQSAVKGELWRLKDSQGKPPGMIGIMPGNAVTFIDNHDTFRT---WVFP 320
Query: 315 SNHIMEGYAYILMHPGIPSVFYDHFYDWGDSIHNQIVKLMDVRRQQDIHSRSSIKILEAQ 374
S+ ++ GY YIL HPG P +FY+H+ +WG + I KL+ +R + I S SS+ I A+
Sbjct: 321 SDKVLLGYVYILTHPGTPCIFYNHYIEWG--LKESISKLVAIRNKNGIGSTSSVTIKAAE 378
Query: 375 SNLYSAIIGDKVCMKIGD----GSWCPAGKEWTLATSGHKYAVWHK 416
++LY A+I DKV MKIG G+ P+ + LA SG +AVW K
Sbjct: 379 ADLYLAMIDDKVIMKIGPKQDVGTLVPSN--FALAYSGLDFAVWEK 422
|
|
| UNIPROTKB|P26612 amyA "alpha-amylase" [Escherichia coli K-12 (taxid:83333)] | Back alignment and assigned GO terms |
|---|
Score = 151 (58.2 bits), Expect = 4.5e-14, Sum P(2) = 4.5e-14
Identities = 58/184 (31%), Positives = 80/184 (43%)
Query: 165 NIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIE-----GARPIFSV 219
NID H V ++I W RW+ FR D + A + KE+IE +P+F V
Sbjct: 204 NIDFRNHAVTEEIKYWARWVMEQTQCDGFRLDAVKHIPAWFYKEWIEHVQEVAPKPLFIV 263
Query: 220 GEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVK-GQFWRLR 278
EYW SH +D Q I+ ++G L FD + EA + G+ + +
Sbjct: 264 AEYW------SHEVD-----KLQTYIDQVEGKTML---FDAPLQMKFHEASRMGRDYDM- 308
Query: 279 DAQGKPPGVMGWWPSRAVTFLDNHDTGSTQA-HWPFPSNHIMEGYAYILMHP-GIPSVFY 336
Q ++ P AVT + NHDT QA P YA IL+ G+PSVFY
Sbjct: 309 -TQIFTGTLVEADPFHAVTLVANHDTQPLQALEAPVEPWFKPLAYALILLRENGVPSVFY 367
Query: 337 DHFY 340
Y
Sbjct: 368 PDLY 371
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q8LFG1 | AMY2_ARATH | 3, ., 2, ., 1, ., 1 | 0.8125 | 0.9927 | 1.0 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| fgenesh4_pm.C_LG_II000069 | alpha-amylase (EC-3.2.1.1) (406 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 416 | |||
| PLN02361 | 401 | PLN02361, PLN02361, alpha-amylase | 0.0 | |
| cd11314 | 302 | cd11314, AmyAc_arch_bac_plant_AmyA, Alpha amylase | 1e-162 | |
| PLN02784 | 894 | PLN02784, PLN02784, alpha-amylase | 1e-162 | |
| PLN00196 | 428 | PLN00196, PLN00196, alpha-amylase; Provisional | 1e-139 | |
| PRK09441 | 479 | PRK09441, PRK09441, cytoplasmic alpha-amylase; Rev | 6e-38 | |
| cd11318 | 391 | cd11318, AmyAc_bac_fung_AmyA, Alpha amylase cataly | 1e-35 | |
| pfam07821 | 63 | pfam07821, Alpha-amyl_C2, Alpha-amylase C-terminal | 1e-24 | |
| smart00810 | 61 | smart00810, Alpha-amyl_C2, Alpha-amylase C-termina | 2e-23 | |
| cd11319 | 375 | cd11319, AmyAc_euk_AmyA, Alpha amylase catalytic d | 4e-15 | |
| cd00551 | 260 | cd00551, AmyAc_family, Alpha amylase catalytic dom | 4e-13 | |
| smart00642 | 166 | smart00642, Aamy, Alpha-amylase domain | 6e-12 | |
| pfam00128 | 314 | pfam00128, Alpha-amylase, Alpha amylase, catalytic | 1e-11 | |
| cd11315 | 352 | cd11315, AmyAc_bac1_AmyA, Alpha amylase catalytic | 1e-09 | |
| cd11320 | 389 | cd11320, AmyAc_AmyMalt_CGTase_like, Alpha amylase | 2e-07 | |
| COG0366 | 505 | COG0366, AmyA, Glycosidases [Carbohydrate transpor | 2e-05 | |
| cd11339 | 344 | cd11339, AmyAc_bac_CMD_like_2, Alpha amylase catal | 1e-04 | |
| cd11352 | 443 | cd11352, AmyAc_5, Alpha amylase catalytic domain f | 6e-04 | |
| cd11340 | 407 | cd11340, AmyAc_bac_CMD_like_3, Alpha amylase catal | 6e-04 |
| >gnl|CDD|177990 PLN02361, PLN02361, alpha-amylase | Back alignment and domain information |
|---|
Score = 815 bits (2108), Expect = 0.0
Identities = 343/397 (86%), Positives = 371/397 (93%), Gaps = 2/397 (0%)
Query: 22 AVIRNGREILFQGFNWESCKHDWWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQN 81
AVIRNGREIL Q FNWES KHDWWRNLE KVPD++KSGFTS WLPP + S APEGYLPQN
Sbjct: 5 AVIRNGREILLQAFNWESHKHDWWRNLEGKVPDLAKSGFTSAWLPPPSQSLAPEGYLPQN 64
Query: 82 LYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDE 141
LYSLNS+YGSEHLLK+LL KMKQ+ VRAMADIVINHRVGTTQGHGG YNRYDGIPL WDE
Sbjct: 65 LYSLNSAYGSEHLLKSLLRKMKQYNVRAMADIVINHRVGTTQGHGGMYNRYDGIPLPWDE 124
Query: 142 HAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGY 201
HAVTSCTGGLGN STGDNF+GVPNIDHTQHFVRKDII WL WLRN VGFQDFRFDFA+GY
Sbjct: 125 HAVTSCTGGLGNRSTGDNFNGVPNIDHTQHFVRKDIIGWLIWLRNDVGFQDFRFDFAKGY 184
Query: 202 SAKYVKEYIEGARPIFSVGEYWDSCNYNSHG--LDYNQDSHRQRIINWIDGTGQLSAAFD 259
SAK+VKEYIE A+P+FSVGEYWDSCNY+ LDYNQDSHRQRI+NWIDGTG LSAAFD
Sbjct: 185 SAKFVKEYIEAAKPLFSVGEYWDSCNYSGPDYRLDYNQDSHRQRIVNWIDGTGGLSAAFD 244
Query: 260 FTTKGILQEAVKGQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFPSNHIM 319
FTTKGILQEAVKGQ+WRLRDAQGKPPGVMGWWPSRAVTF+DNHDTGSTQAHWPFPS+HIM
Sbjct: 245 FTTKGILQEAVKGQWWRLRDAQGKPPGVMGWWPSRAVTFIDNHDTGSTQAHWPFPSDHIM 304
Query: 320 EGYAYILMHPGIPSVFYDHFYDWGDSIHNQIVKLMDVRRQQDIHSRSSIKILEAQSNLYS 379
EGYAYIL HPGIP+VFYDHFYDWG SIH+QIVKL+D+R++QDIHSRSSI+ILEAQSNLYS
Sbjct: 305 EGYAYILTHPGIPTVFYDHFYDWGGSIHDQIVKLIDIRKRQDIHSRSSIRILEAQSNLYS 364
Query: 380 AIIGDKVCMKIGDGSWCPAGKEWTLATSGHKYAVWHK 416
AII +K+CMKIGDGSWCP+G+EWTLATSGH+YAVWHK
Sbjct: 365 AIIDEKLCMKIGDGSWCPSGREWTLATSGHRYAVWHK 401
|
Length = 401 |
| >gnl|CDD|200453 cd11314, AmyAc_arch_bac_plant_AmyA, Alpha amylase catalytic domain found in archaeal, bacterial, and plant Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase) | Back alignment and domain information |
|---|
Score = 458 bits (1182), Expect = e-162
Identities = 168/343 (48%), Positives = 225/343 (65%), Gaps = 45/343 (13%)
Query: 30 ILFQGFNWESCKH-DWWRNLERKVPDISKSGFTSVWLPPATHSF--APEGYLPQNLYSLN 86
++ QGF W+S K WW +LE K P+++ +GFT++WLPP + S + GY P +LY LN
Sbjct: 1 VMLQGFYWDSPKDGTWWNHLESKAPELAAAGFTAIWLPPPSKSVSGSSMGYDPGDLYDLN 60
Query: 87 SSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTS 146
S YGSE L++L+ + ++ +ADIVINHR G D
Sbjct: 61 SRYGSEAELRSLIAALHAKGIKVIADIVINHRSG-----------PD------------- 96
Query: 147 CTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYV 206
TG++F G P++DHT V+ D+ AWL WL+N +GF +RFDF +GY+ YV
Sbjct: 97 ---------TGEDFGGAPDLDHTNPEVQNDLKAWLNWLKNDIGFDGWRFDFVKGYAPSYV 147
Query: 207 KEYIEGARPIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGIL 266
KEY E P FSVGEYWD +Y NQD+HRQR+++WID TG SAAFDFTTK IL
Sbjct: 148 KEYNEATSPSFSVGEYWDGLSYE------NQDAHRQRLVDWIDATGGGSAAFDFTTKYIL 201
Query: 267 QEAVKG-QFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFPSNHIMEGYAYI 325
QEAV ++WRLRD QGKPPG++GWWP +AVTF+DNHDTGSTQ HWPFP++++++GYAYI
Sbjct: 202 QEAVNNNEYWRLRDGQGKPPGLIGWWPQKAVTFVDNHDTGSTQGHWPFPTDNVLQGYAYI 261
Query: 326 LMHPGIPSVFYDHFYDWGDSIHNQIVKLMDVRRQQDIHSRSSI 368
L HPG P VF+DH+YDWG + ++I L+ R++ I S S +
Sbjct: 262 LTHPGTPCVFWDHYYDWG--LKDEIKALIAARKRAGIGSTSKV 302
|
AmyA (EC 3.2.1.1) catalyzes the hydrolysis of alpha-(1,4) glycosidic linkages of glycogen, starch, related polysaccharides, and some oligosaccharides. This group includes AmyA from bacteria, archaea, water fleas, and plants. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase. Length = 302 |
| >gnl|CDD|215419 PLN02784, PLN02784, alpha-amylase | Back alignment and domain information |
|---|
Score = 479 bits (1233), Expect = e-162
Identities = 205/415 (49%), Positives = 273/415 (65%), Gaps = 11/415 (2%)
Query: 9 DETNQQTDLVKIRAVIRNGREILFQGFNWESCKHD-WWRNLERKVPDISKSGFTSVWLPP 67
+ Q +KI + +G EIL QGFNWES K W+ L K ++S GFT VWLPP
Sbjct: 483 EAERIQKPPIKICSGTGSGFEILCQGFNWESHKSGRWYMELGEKAAELSSLGFTVVWLPP 542
Query: 68 ATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGG 127
T S +PEGY+P++LY+LNS YG+ LK L+ + ++ + D V+NHR Q G
Sbjct: 543 PTESVSPEGYMPKDLYNLNSRYGTIDELKDLVKSFHEVGIKVLGDAVLNHRCAHFQNQNG 602
Query: 128 KYNRYDGIPLSWDEHAVTSCT---GGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWL 184
+N + G L+WD+ AV + G GN S+GDNFH PNIDH+Q FVRKD+ WL W+
Sbjct: 603 VWNIFGG-RLNWDDRAVVADDPHFQGRGNKSSGDNFHAAPNIDHSQDFVRKDLKEWLCWM 661
Query: 185 RNTVGFQDFRFDFARGYSAKYVKEYIEGARPIFSVGEYWDSCNYNSHGLDYNQDSHRQRI 244
R VG+ +R DF RG+ YVK+Y+E + P F+VGEYWDS +Y +DYNQD+HRQRI
Sbjct: 662 RKEVGYDGWRLDFVRGFWGGYVKDYMEASEPYFAVGEYWDSLSYTYGEMDYNQDAHRQRI 721
Query: 245 INWIDGTGQLSAAFDFTTKGILQEAV-KGQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHD 303
++WI+ T + AFD TTKGIL A+ + ++WRL D +GKPPGV+GWWPSRAVTF++NHD
Sbjct: 722 VDWINATNGTAGAFDVTTKGILHSALERCEYWRLSDQKGKPPGVVGWWPSRAVTFIENHD 781
Query: 304 TGSTQAHWPFPSNHIMEGYAYILMHPGIPSVFYDHFYDWGDSIHNQIVKLMDVRRQQDIH 363
TGSTQ HW FP M+GYAYIL HPG P+VFYDH + H +I L+ +R +Q IH
Sbjct: 782 TGSTQGHWRFPEGKEMQGYAYILTHPGTPAVFYDHIF---SHYHPEIASLISLRNRQKIH 838
Query: 364 SRSSIKILEAQSNLYSAIIGDKVCMKIGDGSWCP--AGKEWTLATSGHKYAVWHK 416
RS +KI +A+ ++Y+AII +KV MKIG G + P + W++A G Y VW
Sbjct: 839 CRSEVKITKAERDVYAAIIDEKVAMKIGPGHYEPPNGPQNWSVALEGQDYKVWET 893
|
Length = 894 |
| >gnl|CDD|165762 PLN00196, PLN00196, alpha-amylase; Provisional | Back alignment and domain information |
|---|
Score = 405 bits (1042), Expect = e-139
Identities = 190/407 (46%), Positives = 259/407 (63%), Gaps = 23/407 (5%)
Query: 29 EILFQGFNWESCKHD--WWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLN 86
++LFQGFNWES K + W+ L KV DI+ +G T VWLPP +HS + +GY+P LY L+
Sbjct: 25 QVLFQGFNWESWKQNGGWYNFLMGKVDDIAAAGITHVWLPPPSHSVSEQGYMPGRLYDLD 84
Query: 87 SS-YGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDG-IP---LSWDE 141
+S YG+E LK+L+ V+ +ADIVINHR + G Y ++G P L W
Sbjct: 85 ASKYGNEAQLKSLIEAFHGKGVQVIADIVINHRTAEHKDGRGIYCLFEGGTPDSRLDWGP 144
Query: 142 HAV----TSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDF 197
H + T + G GN TG +F P+IDH V++++I WL WL++ +GF +R DF
Sbjct: 145 HMICRDDTQYSDGTGNLDTGADFAAAPDIDHLNKRVQRELIGWLLWLKSDIGFDAWRLDF 204
Query: 198 ARGYSAKYVKEYIEGARPIFSVGEYWDSCNYNSHGL-DYNQDSHRQRIINWID---GTGQ 253
A+GYSA+ K YI+G P F+V E W S Y G +Y+Q++HRQ ++NW+D G
Sbjct: 205 AKGYSAEVAKVYIDGTEPSFAVAEIWTSMAYGGDGKPEYDQNAHRQELVNWVDRVGGAAS 264
Query: 254 LSAAFDFTTKGILQEAVKGQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPF 313
+ FDFTTKGIL AV+G+ WRLR A GK PGV+GWWP++AVTF+DNHDTGSTQ WPF
Sbjct: 265 PATVFDFTTKGILNVAVEGELWRLRGADGKAPGVIGWWPAKAVTFVDNHDTGSTQHMWPF 324
Query: 314 PSNHIMEGYAYILMHPGIPSVFYDHFYDWGDSIHNQIVKLMDVRRQQDIHSRSSIKILEA 373
PS+ +M+GYAYIL HPG P +FYDHF+DWG + +I L+ +R + I S ++I+EA
Sbjct: 325 PSDKVMQGYAYILTHPGNPCIFYDHFFDWG--LKEEIAALVSIRNRNGITPTSELRIMEA 382
Query: 374 QSNLYSAIIGDKVCMKIGD----GSWCPAGKEWTLATSGHKYAVWHK 416
++LY A I KV +KIG P G + + G+ YAVW K
Sbjct: 383 DADLYLAEIDGKVIVKIGSRYDVSHLIPEG--FQVVAHGNGYAVWEK 427
|
Length = 428 |
| >gnl|CDD|236518 PRK09441, PRK09441, cytoplasmic alpha-amylase; Reviewed | Back alignment and domain information |
|---|
Score = 142 bits (361), Expect = 6e-38
Identities = 98/417 (23%), Positives = 157/417 (37%), Gaps = 107/417 (25%)
Query: 26 NGREILFQGFNWESCKHD--WWRNLERKVPDISKSGFTSVWLPPA---THSFAPEGYLPQ 80
+ Q F W +D W L + P+++++G T+VWLPPA T GY
Sbjct: 1 MRNGTMMQYFEWY-LPNDGKLWNRLAERAPELAEAGITAVWLPPAYKGTSGGYDVGYGVY 59
Query: 81 NLYSLN---------SSYGSEHLLKALLHKMKQHKVRAMADIVINHRVG----------- 120
+L+ L + YG++ L + + ++ ++ AD+V+NH+ G
Sbjct: 60 DLFDLGEFDQKGTVRTKYGTKEELLNAIDALHENGIKVYADVVLNHKAGADEKETFRVVE 119
Query: 121 ----------------------TTQGHGGKY-----NRYDGIPLSWDEHAVTSCTGGLGN 153
T G GGKY + Y +DE+ +G
Sbjct: 120 VDPDDRTQIISEPYEIEGWTRFTFPGRGGKYSDFKWHWYHFSGTDYDEN--PDESGIFKI 177
Query: 154 GSTGDNF-HGV------------PNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARG 200
G + V +ID VR+++ W +W T GF FR D +
Sbjct: 178 VGDGKGWDDQVDDENGNFDYLMGADIDFRHPEVREELKYWAKWYMETTGFDGFRLDAVKH 237
Query: 201 YSAKYVKEYIE-----GARPIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLS 255
A ++KE+IE + +F VGEYW + D + ++++ +
Sbjct: 238 IDAWFIKEWIEHVREVAGKDLFIVGEYWSH----------DVDK----LQDYLEQVEGKT 283
Query: 256 AAFDFTTKGILQEAVK-GQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDT------GSTQ 308
FD EA K G+ + +R+ ++ P AVTF+DNHDT S
Sbjct: 284 DLFDVPLHYNFHEASKQGRDYDMRNIFD--GTLVEADPFHAVTFVDNHDTQPGQALESPV 341
Query: 309 AHWPFPSNHIMEGYAYILMHP-GIPSVFYDHFY-----DWGDSIHNQIVKLMDVRRQ 359
W P YA IL+ G P VFY +Y ++ KL+ R+
Sbjct: 342 EPWFKPL-----AYALILLREEGYPCVFYGDYYGASGYYIDMPFKEKLDKLLLARKN 393
|
Length = 479 |
| >gnl|CDD|200457 cd11318, AmyAc_bac_fung_AmyA, Alpha amylase catalytic domain found in bacterial and fungal Alpha amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase) | Back alignment and domain information |
|---|
Score = 134 bits (340), Expect = 1e-35
Identities = 99/414 (23%), Positives = 159/414 (38%), Gaps = 107/414 (25%)
Query: 29 EILFQGFNWES-CKHDWWRNLERKVPDISKSGFTSVWLPPATHSFAPE---GYLPQNLYS 84
+ Q F W W+ L P++++ G T+VWLPPA + GY +LY
Sbjct: 2 GTMMQYFEWYLPADGQHWKRLAEDAPELAELGITAVWLPPAYKGASGTEDVGYDVYDLYD 61
Query: 85 LN---------SSYGSEHLLKALLHKMKQHKVRAMADIVINHRVG--------------- 120
L + YG++ L + + ++ ++ AD V+NH+ G
Sbjct: 62 LGEFDQKGTVRTKYGTKEELLEAIKALHENGIQVYADAVLNHKAGADETETVKAVEVDPN 121
Query: 121 ------------------TTQGHGGKYNRY-------DGIPLSWD----EHAVTSCTGGL 151
T G GGKY+ + G+ +D + +
Sbjct: 122 DRNKEISEPYEIEAWTKFTFPGRGGKYSDFKWNWQHFSGV--DYDQKTKKKGIFKINFEG 179
Query: 152 GNGSTG-DNFHG------VPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAK 204
D+ +G +ID++ VR+++ W +W NT G FR D + SA
Sbjct: 180 KGWDEDVDDENGNYDYLMGADIDYSNPEVREELKRWGKWYINTTGLDGFRLDAVKHISAS 239
Query: 205 YVKEYI-----EGARPIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFD 259
++K++I E + +F+VGEYW + D + + +++D T + FD
Sbjct: 240 FIKDWIDHLRRETGKDLFAVGEYW------------SGDL--EALEDYLDATDGKMSLFD 285
Query: 260 FTTKGILQEA-VKGQFWRLRD-AQGKPPGVMGWWPSRAVTFLDNHDT------GSTQAHW 311
EA G + LR G ++ P +AVTF+DNHDT S W
Sbjct: 286 VPLHYNFHEASKSGGNYDLRKIFDGT---LVQSRPDKAVTFVDNHDTQPGQSLESWVEPW 342
Query: 312 PFPSNHIMEGYAYILMHP-GIPSVFYDHFY-----DWGDSIHNQIVKLMDVRRQ 359
P YA IL+ G P VFY +Y D + KL+ R+
Sbjct: 343 FKPL-----AYALILLRKDGYPCVFYGDYYGIPGEDPIPPKKELLDKLLKARKL 391
|
AmyA (EC 3.2.1.1) catalyzes the hydrolysis of alpha-(1,4) glycosidic linkages of glycogen, starch, related polysaccharides, and some oligosaccharides. This group includes bacterial and fungal proteins. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase. Length = 391 |
| >gnl|CDD|219596 pfam07821, Alpha-amyl_C2, Alpha-amylase C-terminal beta-sheet domain | Back alignment and domain information |
|---|
Score = 95.8 bits (239), Expect = 1e-24
Identities = 32/63 (50%), Positives = 45/63 (71%), Gaps = 4/63 (6%)
Query: 358 RQQDIHSRSSIKILEAQSNLYSAIIGDKVCMKIGD----GSWCPAGKEWTLATSGHKYAV 413
++ IHSRS+++IL A ++LY+AII KV +KIG G+W P+G+ W LA SG+ YAV
Sbjct: 1 KRNGIHSRSAVRILAADADLYAAIIDGKVIVKIGPRYDVGNWIPSGRGWKLAASGNDYAV 60
Query: 414 WHK 416
W K
Sbjct: 61 WEK 63
|
This domain is organised as a five-stranded anti-parallel beta-sheet. It is the probable result of a decay of the common-fold. Length = 63 |
| >gnl|CDD|129046 smart00810, Alpha-amyl_C2, Alpha-amylase C-terminal beta-sheet domain | Back alignment and domain information |
|---|
Score = 92.0 bits (229), Expect = 2e-23
Identities = 32/63 (50%), Positives = 44/63 (69%), Gaps = 6/63 (9%)
Query: 358 RQQDIHSRSSIKILEAQSNLYSAIIGDKVCMKIGD----GSWCPAGKEWTLATSGHKYAV 413
++ IHSRSS+KIL A+++LY A+I +KV MKIG G+ P+G + LA SG+ YAV
Sbjct: 1 KRNGIHSRSSLKILAAEADLYVAMIDEKVIMKIGPRYDVGNLIPSG--FHLAASGNDYAV 58
Query: 414 WHK 416
W K
Sbjct: 59 WEK 61
|
This entry represents the beta-sheet domain that is found in several alpha-amylases, usually at the C-terminus. This domain is organised as a five-stranded anti-parallel beta-sheet. Length = 61 |
| >gnl|CDD|200458 cd11319, AmyAc_euk_AmyA, Alpha amylase catalytic domain found in eukaryotic Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase) | Back alignment and domain information |
|---|
Score = 76.1 bits (188), Expect = 4e-15
Identities = 78/334 (23%), Positives = 125/334 (37%), Gaps = 88/334 (26%)
Query: 45 WRNLERKVPDISKSGFTSVWLPPATHS--------FAPEGYLPQNLYSLNSSYGSEHLLK 96
W+ + K+ I GF ++W+ P + A GY Q+LYSLN +G+ LK
Sbjct: 42 WKGIINKLDYIQGMGFDAIWISPIVKNIEGNTAYGEAYHGYWAQDLYSLNPHFGTADDLK 101
Query: 97 AL---LHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLS-----------WDEH 142
AL LHK + M D+V+NH G Y+ + +P + D +
Sbjct: 102 ALSKALHKR---GMYLMVDVVVNHMASAGPGSDVDYSSF--VPFNDSSYYHPYCWITDYN 156
Query: 143 AVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYS 202
TS + GD+ +P+++ FV + W++ L + R D A+
Sbjct: 157 NQTSVE----DCWLGDDVVALPDLNTENPFVVSTLNDWIKNLVSNYSIDGLRIDTAKHVR 212
Query: 203 AKYVKEYIEGARPIFSVGEYWDS-----CNYNSHGLDYNQDSHRQRIINWIDGTGQLSAA 257
+ ++E A +F++GE +D C Y L
Sbjct: 213 KDFWPGFVEAAG-VFAIGEVFDGDPNYVCPY----------------------QNYLDGV 249
Query: 258 FDFTTKGILQEA---VKGQFWRLRD------AQGKPPGVMGWWPSRAVTFLDNHDTGSTQ 308
++ L +A KG L D + K P ++G TFL+NHD
Sbjct: 250 LNYPLYYPLVDAFQSTKGSMSALVDTINSVQSSCKDPTLLG-------TFLENHDN---- 298
Query: 309 AHWP-FPSNH-----IMEGYAYILMHPGIPSVFY 336
P F S A+ L+ GIP ++Y
Sbjct: 299 ---PRFLSYTSDQALAKNALAFTLLSDGIPIIYY 329
|
AmyA (EC 3.2.1.1) catalyzes the hydrolysis of alpha-(1,4) glycosidic linkages of glycogen, starch, related polysaccharides, and some oligosaccharides. This group includes eukaryotic alpha-amylases including proteins from fungi, sponges, and protozoans. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase. Length = 375 |
| >gnl|CDD|200451 cd00551, AmyAc_family, Alpha amylase catalytic domain family | Back alignment and domain information |
|---|
Score = 68.4 bits (167), Expect = 4e-13
Identities = 50/302 (16%), Positives = 93/302 (30%), Gaps = 80/302 (26%)
Query: 44 WWRNLERKVPDISKSGFTSVWLPPA----THSFAPEGYLPQNLYSLNSSYGSEHLLKALL 99
+ + K+ + G T++WL P + + + Y ++ G+E K L+
Sbjct: 23 DLKGIIDKLDYLKDLGVTAIWLTPIFESPEYDGYDKDDGYLDYYEIDPRLGTEEDFKELV 82
Query: 100 HKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDN 159
+ ++ + D+V NH + R+ W + V D
Sbjct: 83 KAAHKRGIKVILDLVFNHDIL----------RF------WLDEGV-------------DG 113
Query: 160 FHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGARPIFSV 219
F +D +H + + + +LR +R +
Sbjct: 114 FR----LDAAKHVPKPEPVEFLREIRKDAKLAKPDT---------------------LLL 148
Query: 220 GEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKGQFWRLRD 279
GE W + + L + FDF L++A+KG
Sbjct: 149 GEAWGG------PDELLAKAG---------FDDGLDSVFDFPLLEALRDALKGGEG--AL 191
Query: 280 AQGKPPGVMGWWPSRAVTFLDNHDT-----GSTQAHWPFPSNHIMEGYAYILMHPGIPSV 334
A ++ + V FL NHDT + + A +L PG P +
Sbjct: 192 AILAALLLLNPEGALLVNFLGNHDTFRLADLVSYKIVELRKARLKLALALLLTLPGTPMI 251
Query: 335 FY 336
+Y
Sbjct: 252 YY 253
|
The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; and C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost this catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase. Length = 260 |
| >gnl|CDD|214758 smart00642, Aamy, Alpha-amylase domain | Back alignment and domain information |
|---|
Score = 63.1 bits (154), Expect = 6e-12
Identities = 19/95 (20%), Positives = 37/95 (38%), Gaps = 5/95 (5%)
Query: 29 EILFQGFNWESCK-HDWWRNLERKVPDISKSGFTSVWLPPATHSFAP----EGYLPQNLY 83
+I F + + + K+ + G T++WL P S GY +
Sbjct: 1 QIYPDRFADGNGDGGGDLQGIIEKLDYLKDLGVTAIWLSPIFESPQGYPSYHGYDISDYK 60
Query: 84 SLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHR 118
++ +G+ K L+ ++ + D+VINH
Sbjct: 61 QIDPRFGTMEDFKELVDAAHARGIKVILDVVINHT 95
|
Length = 166 |
| >gnl|CDD|215737 pfam00128, Alpha-amylase, Alpha amylase, catalytic domain | Back alignment and domain information |
|---|
Score = 65.0 bits (159), Expect = 1e-11
Identities = 65/314 (20%), Positives = 114/314 (36%), Gaps = 36/314 (11%)
Query: 45 WRNLERKVPDISKSGFTSVWL-PPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMK 103
+ + K+ + G T++WL P + GY + Y ++ +G+ K L+ K
Sbjct: 3 LQGIIDKLDYLKDLGVTAIWLSPIFDSPQSYHGYDITDYYKIDPHFGTMDDFKELIDKAH 62
Query: 104 QHKVRAMADIVINHRVGTTQGHGG--KYNRYDGIPLS----WDEHAVTSCTGGLGNGS-- 155
+ ++ + D+V NH T+ H + P W ++ + GS
Sbjct: 63 ERGIKVILDLVPNH---TSDEHAWFQESRSSKDNPYRDYYIWRIYSPPNNWISYFGGSAW 119
Query: 156 -----TGDNFH-GVPNIDHTQHFVRKDIIAWL--RWLRNTVGFQDFRFDFARGYSAKYVK 207
F +P+++ VRK++ W+ WL G FR D + S +
Sbjct: 120 SDDEDGQYLFLVSLPDLNTENPEVRKELKDWVVKFWLDK--GIDGFRIDAVKHISKGFWH 177
Query: 208 EYI----EGARPIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWID-GTGQLSAAFDFTT 262
E+ E +F+VGE W + ++ YN + N+ GQ
Sbjct: 178 EFTQEMNEYKPDVFTVGEVWGGSDEDARVYAYNSYMELESGFNFPHFDLGQNVFIPFRLN 237
Query: 263 KGILQEAVKGQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFPSNHIMEGY 322
++ + + Q P VTFL NHD + + S I
Sbjct: 238 PFSAKDLKE----MISSWQSDYPD-----VDWLVTFLGNHDQPRFLSRFGDDSAKIKLAL 288
Query: 323 AYILMHPGIPSVFY 336
A +L PG P ++Y
Sbjct: 289 ALLLTLPGTPYIYY 302
|
Alpha amylase is classified as family 13 of the glycosyl hydrolases. The structure is an 8 stranded alpha/beta barrel containing the active site, interrupted by a ~70 a.a. calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain. Length = 314 |
| >gnl|CDD|200454 cd11315, AmyAc_bac1_AmyA, Alpha amylase catalytic domain found in bacterial Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase) | Back alignment and domain information |
|---|
Score = 58.8 bits (143), Expect = 1e-09
Identities = 65/336 (19%), Positives = 120/336 (35%), Gaps = 71/336 (21%)
Query: 42 HDW-WR--NLERKVPDISKSGFTSVWLPPATHSFAPEG--------YLPQNLYSLNSSYG 90
H + W ++ +P+I+ +G+T++ P S Y P + N+ G
Sbjct: 6 HAFDWSFNTIKENLPEIAAAGYTAIQTSPPQKSKEGGNEGGNWWYRYQPTDYRIGNNQLG 65
Query: 91 SEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRY---DGIPLSWDEHAVTSC 147
+E KAL ++ ++ + D+V NH + + I L E
Sbjct: 66 TEDDFKALCAAAHKYGIKIIVDVVFNH---MANEGSAIEDLWYPSADIELFSPED----- 117
Query: 148 TGGLGNGS--------TGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFAR 199
G G S T G+P+++ V++ A+L+ L +G FRFD
Sbjct: 118 FHGNGGISNWNDRWQVTQGRLGGLPDLNTENPAVQQQQKAYLKALVA-LGVDGFRFD--- 173
Query: 200 GYSAKYVKEYIEGA---------------RPIFSVGEYWDSCNYNSHGLDYNQDSHRQRI 244
+AK+++ E + +F GE DY
Sbjct: 174 --AAKHIELPDEPSKASDFWTNILNNLDKDGLFIYGEVLQDGGSRDS--DYAS------- 222
Query: 245 INWIDGTGQLSAAFDFTTKGILQEAVKGQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDT 304
++ G ++A+ F L+ A+K F G RAVT++++HDT
Sbjct: 223 --YLSLGGVTASAYGFP----LRGALKNAFLFGGSLDPASYG-QALPSDRAVTWVESHDT 275
Query: 305 ---GSTQAHWPFPSNHIMEGYAYILMHPGIPSVFYD 337
++ + + +AY+ G +F+
Sbjct: 276 YNNDGFESTGLDDEDERL-AWAYLAARDGGTPLFFS 310
|
AmyA (EC 3.2.1.1) catalyzes the hydrolysis of alpha-(1,4) glycosidic linkages of glycogen, starch, related polysaccharides, and some oligosaccharides. This group includes Firmicutes, Proteobacteria, Actinobacteria, and Cyanobacteria. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase. Length = 352 |
| >gnl|CDD|200459 cd11320, AmyAc_AmyMalt_CGTase_like, Alpha amylase catalytic domain found in maltogenic amylases, cyclodextrin glycosyltransferase, and related proteins | Back alignment and domain information |
|---|
Score = 52.3 bits (126), Expect = 2e-07
Identities = 58/318 (18%), Positives = 114/318 (35%), Gaps = 44/318 (13%)
Query: 45 WRNLERKVPDISKSGFTSVWL-PPATHSFAP---------EGYLPQNLYSLNSSYGSEHL 94
W+ + K+P + G T++W+ PP + +P GY ++ N +G+
Sbjct: 46 WQGIIDKLPYLKDLGVTAIWISPPVENINSPIEGGGNTGYHGYWARDFKRTNEHFGTWED 105
Query: 95 LKALLHKMKQHKVRAMADIVINHRVGTTQGHGGK-YN------RYDGIPLSWDEHAVTSC 147
L+ + ++ + D V NH G Y+ Y W H
Sbjct: 106 FDELVDAAHANGIKVIIDFVPNHSSPADYAEDGALYDNGTLVGDYPNDDNGWFHHN---- 161
Query: 148 TGGLGNGSTGD-----NFHGVPNIDHTQHFVRKDII-AWLRWLRNTVGFQDFRFDFARGY 201
GG+ + S + N + +++ + +V + + A WL G R D +
Sbjct: 162 -GGIDDWSDREQVRYKNLFDLADLNQSNPWVDQYLKDAIKFWL--DHGIDGIRVDAVKHM 218
Query: 202 SAKYVKEY---IEGARPIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAF 258
+ K + I +P+F+ GE++ + DY + ++ G L
Sbjct: 219 PPGWQKSFADAIYSKKPVFTFGEWFLGSPDPGYE-DYVKFANN-------SGMSLLDFPL 270
Query: 259 DFTTKGILQEAVKGQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFPSNHI 318
+ + + + L + + + VTF+DNHD +
Sbjct: 271 NQAIRDVFAGFTAT-MYDLDAMLQQTSSDYNY-ENDLVTFIDNHDMPRFLT-LNNNDKRL 327
Query: 319 MEGYAYILMHPGIPSVFY 336
+ A++L GIP ++Y
Sbjct: 328 HQALAFLLTSRGIPVIYY 345
|
Enzymes such as amylases, cyclomaltodextrinase (CDase), and cyclodextrin glycosyltransferase (CGTase) degrade starch to smaller oligosaccharides by hydrolyzing the alpha-D-(1,4) linkages between glucose residues. In the case of CGTases, an additional cyclization reaction is catalyzed yielding mixtures of cyclic oligosaccharides which are referred to as alpha-, beta-, or gamma-cyclodextrins (CDs), consisting of six, seven, or eight glucose residues, respectively. CGTases are characterized depending on the major product of the cyclization reaction. Besides having similar catalytic site residues, amylases and CGTases contain carbohydrate binding domains that are distant from the active site and are implicated in attaching the enzyme to raw starch granules and in guiding the amylose chain into the active site. The maltogenic alpha-amylase from Bacillus is a five-domain structure, unlike most alpha-amylases, but similar to that of cyclodextrin glycosyltransferase. In addition to the A, B, and C domains, they have a domain D and a starch-binding domain E. Maltogenic amylase is an endo-acting amylase that has activity on cyclodextrins, terminally modified linear maltodextrins, and amylose. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase. Length = 389 |
| >gnl|CDD|223443 COG0366, AmyA, Glycosidases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 46.1 bits (109), Expect = 2e-05
Identities = 17/74 (22%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 45 WRNLERKVPDISKSGFTSVWLPPATHSF-APEGYLPQNLYSLNSSYGSEHLLKALLHKMK 103
+ + K+ + + G ++WL P S A GY + ++ +G+E K L+ +
Sbjct: 28 LKGITEKLDYLKELGVDAIWLSPIFESPQADHGYDVSDYTKVDPHFGTEEDFKELVEEAH 87
Query: 104 QHKVRAMADIVINH 117
+ ++ + D+V NH
Sbjct: 88 KRGIKVILDLVFNH 101
|
Length = 505 |
| >gnl|CDD|200478 cd11339, AmyAc_bac_CMD_like_2, Alpha amylase catalytic domain found in bacterial cyclomaltodextrinases and related proteins | Back alignment and domain information |
|---|
Score = 43.4 bits (103), Expect = 1e-04
Identities = 57/313 (18%), Positives = 93/313 (29%), Gaps = 86/313 (27%)
Query: 45 WRNLERKVPDISKSGFTSVWLPP-------ATHSFAPEGYLPQNLYSLNSSYGSEHLLKA 97
++ L K+ I GFT++W+ P S GY + Y ++ G++ L+
Sbjct: 44 FKGLIDKLDYIKDLGFTAIWITPVVKNRSVQAGSAGYHGYWGYDFYRIDPHLGTDADLQD 103
Query: 98 LLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTG 157
L+ ++ + DIV+NH TG
Sbjct: 104 LIDAAHARGIKVILDIVVNH--------------------------------------TG 125
Query: 158 DNFHGVPNIDHTQHFVRKDIIAW-LRWLRNTVGFQDFRFDFARGYSAKYVKEYI------ 210
D ++ V +I W+ G FR D + ++ +E+
Sbjct: 126 D-------LNTENPEVVDYLIDAYKWWI--DTGVDGFRIDTVKHVPREFWQEFAPAIRQA 176
Query: 211 EGARPIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGIL---Q 267
G F GE +D S+ G L +
Sbjct: 177 AGKPDFFMFGEVYDG-----------DPSYIAPYTTTAGGDSVLDFPLYGAIRDAFAGGG 225
Query: 268 EAVKGQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTG----STQAHWPFPSNHIMEGYA 323
Q L D + VTFLDNHD G S + + + A
Sbjct: 226 SGDLLQDLFLSDDLYNDATEL-------VTFLDNHDMGRFLSSLKDGSADGTARLALALA 278
Query: 324 YILMHPGIPSVFY 336
+ GIP ++Y
Sbjct: 279 LLFTSRGIPCIYY 291
|
Cyclomaltodextrinase (CDase; EC3.2.1.54), neopullulanase (NPase; EC 3.2.1.135), and maltogenic amylase (MA; EC 3.2.1.133) catalyze the hydrolysis of alpha-(1,4) glycosidic linkages on a number of substrates including cyclomaltodextrins (CDs), pullulan, and starch. These enzymes hydrolyze CDs and starch to maltose and pullulan to panose by cleavage of alpha-1,4 glycosidic bonds whereas alpha-amylases essentially lack activity on CDs and pullulan. They also catalyze transglycosylation of oligosaccharides to the C3-, C4- or C6-hydroxyl groups of various acceptor sugar molecules. Since these proteins are nearly indistinguishable from each other, they are referred to as cyclomaltodextrinases (CMDs). This group of CMDs is bacterial. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase. Length = 344 |
| >gnl|CDD|200489 cd11352, AmyAc_5, Alpha amylase catalytic domain found in an uncharacterized protein family | Back alignment and domain information |
|---|
Score = 41.5 bits (98), Expect = 6e-04
Identities = 65/355 (18%), Positives = 99/355 (27%), Gaps = 95/355 (26%)
Query: 55 ISKSGFTSVWLPPA----THSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAM 110
+ + G T++WL P GY QN ++ +G+ L+ L+ + +
Sbjct: 59 LKRLGVTALWLSPVFKQRPELETYHGYGIQNFLDVDPRFGTREDLRDLVDAAHARGIYVI 118
Query: 111 ADIVINH------------RVGTTQGHGGKYNRYDGIPLS----------WDEHAV---- 144
DI++NH + + G N G + A+
Sbjct: 119 LDIILNHSGDVFSYDDDRPYSSSPGYYRGFPNYPPGGWFIGGDQDALPEWRPDDAIWPAE 178
Query: 145 ---TSCTGGLGNGSTGDN--------FHGVPNIDHTQHFVRKDIIAWL-----RWLRNTV 188
G D F + + + + L W+
Sbjct: 179 LQNLEYYTRKGRIRNWDGYPEYKEGDFFSLKDFRTGSGSIPSAALDILARVYQYWIAYA- 237
Query: 189 GFQD---FRFD--------FARGYSAKYVKEYIE--GARPIFSVGEYWDSCNYNSHGLDY 235
D FR D AR Y +KE+ + G F GE
Sbjct: 238 ---DIDGFRIDTVKHMEPGAAR-YFCNAIKEFAQSIGKDNFFLFGEITGG--------RE 285
Query: 236 NQDSHRQRIINWIDGTGQLSAAFDFT-TKGILQEAVKG--------QFWRLRDAQGKPPG 286
+D TG L AA D L+ KG Q + G G
Sbjct: 286 AAAYED------LDVTG-LDAALDIPEIPFKLENVAKGLAPPAEYFQLFENSKLVGM--G 336
Query: 287 VMGWWPSRAVTFLDNHDTGSTQ-AHWPFPSN----HIMEGYAYILMHPGIPSVFY 336
W+ VTFLD+HD + A L GIP ++Y
Sbjct: 337 SHRWYGKFHVTFLDDHDQVGRFYKKRRAADAAGDAQLAAALALNLFTLGIPCIYY 391
|
The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase. Length = 443 |
| >gnl|CDD|200479 cd11340, AmyAc_bac_CMD_like_3, Alpha amylase catalytic domain found in bacterial cyclomaltodextrinases and related proteins | Back alignment and domain information |
|---|
Score = 41.4 bits (98), Expect = 6e-04
Identities = 69/326 (21%), Positives = 115/326 (35%), Gaps = 82/326 (25%)
Query: 59 GFTSVWLPPATHSFAPE----GYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIV 114
G T++WL P + P GY + Y ++ +GS K L+ K ++ + D+V
Sbjct: 58 GVTAIWLTPLLENDMPSYSYHGYAATDFYRIDPRFGSNEDYKELVSKAHARGMKLIMDMV 117
Query: 115 INHRVGTTQGH--------------GGKYNR--YDGIPLSWDEHAVTSCTGGLGNGSTGD 158
NH G+ H +Y + + L D +A + +G
Sbjct: 118 PNH-CGS--EHWWMKDLPTKDWINQTPEYTQTNHRRTALQ-DPYASQADRKLFLDGW--- 170
Query: 159 NF-HGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFD--------FARGYSAKYVKEY 209
F +P+++ V + +I W G R D F ++ ++EY
Sbjct: 171 -FVPTMPDLNQRNPLVARYLIQNSIWWIEYAGLDGIRVDTYPYSDKDFMSEWTKAIMEEY 229
Query: 210 IEGARPIFS-VGEYWDSCNYNSHGLDYNQDSHRQRIINWIDG-TGQLSAAFDFTTKGILQ 267
P F+ VGE W + ++ Q+ DG L + DF + L+
Sbjct: 230 -----PNFNIVGEEWSG--------NPAIVAYWQKGKKNPDGYDSHLPSVMDFPLQDALR 276
Query: 268 EAVKGQFW------RLRDAQGK----PPGVMGWWPSRAVTFLDNHDT-------GSTQAH 310
+A+ + RL + P P+ V FLDNHDT G
Sbjct: 277 DALNEEEGWDTGLNRLYETLANDFLYPD------PNNLVIFLDNHDTSRFYSQVGEDLDK 330
Query: 311 WPFPSNHIMEGYAYILMHPGIPSVFY 336
+ A +L GIP ++Y
Sbjct: 331 FKL-------ALALLLTTRGIPQLYY 349
|
Cyclomaltodextrinase (CDase; EC3.2.1.54), neopullulanase (NPase; EC 3.2.1.135), and maltogenic amylase (MA; EC 3.2.1.133) catalyze the hydrolysis of alpha-(1,4) glycosidic linkages on a number of substrates including cyclomaltodextrins (CDs), pullulan, and starch. These enzymes hydrolyze CDs and starch to maltose and pullulan to panose by cleavage of alpha-1,4 glycosidic bonds whereas alpha-amylases essentially lack activity on CDs and pullulan. They also catalyze transglycosylation of oligosaccharides to the C3-, C4- or C6-hydroxyl groups of various acceptor sugar molecules. Since these proteins are nearly indistinguishable from each other, they are referred to as cyclomaltodextrinases (CMDs). This group of CMDs is bacterial. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase. Length = 407 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 416 | |||
| PLN02361 | 401 | alpha-amylase | 100.0 | |
| PLN00196 | 428 | alpha-amylase; Provisional | 100.0 | |
| PLN02784 | 894 | alpha-amylase | 100.0 | |
| PRK09441 | 479 | cytoplasmic alpha-amylase; Reviewed | 100.0 | |
| PRK10785 | 598 | maltodextrin glucosidase; Provisional | 100.0 | |
| TIGR02456 | 539 | treS_nterm trehalose synthase. Trehalose synthase | 100.0 | |
| PRK09505 | 683 | malS alpha-amylase; Reviewed | 100.0 | |
| TIGR02403 | 543 | trehalose_treC alpha,alpha-phosphotrehalase. Treha | 100.0 | |
| PRK10933 | 551 | trehalose-6-phosphate hydrolase; Provisional | 100.0 | |
| TIGR02402 | 542 | trehalose_TreZ malto-oligosyltrehalose trehalohydr | 100.0 | |
| TIGR02104 | 605 | pulA_typeI pullulanase, type I. Pullulan is an unu | 100.0 | |
| PRK12313 | 633 | glycogen branching enzyme; Provisional | 100.0 | |
| TIGR01515 | 613 | branching_enzym alpha-1,4-glucan:alpha-1,4-glucan | 100.0 | |
| TIGR02100 | 688 | glgX_debranch glycogen debranching enzyme GlgX. Th | 100.0 | |
| PRK05402 | 726 | glycogen branching enzyme; Provisional | 100.0 | |
| PF00128 | 316 | Alpha-amylase: Alpha amylase, catalytic domain; In | 100.0 | |
| PRK03705 | 658 | glycogen debranching enzyme; Provisional | 100.0 | |
| PRK14706 | 639 | glycogen branching enzyme; Provisional | 100.0 | |
| PRK14510 | 1221 | putative bifunctional 4-alpha-glucanotransferase/g | 100.0 | |
| PRK12568 | 730 | glycogen branching enzyme; Provisional | 100.0 | |
| TIGR02102 | 1111 | pullulan_Gpos pullulanase, extracellular, Gram-pos | 100.0 | |
| PRK13840 | 495 | sucrose phosphorylase; Provisional | 100.0 | |
| TIGR03852 | 470 | sucrose_gtfA sucrose phosphorylase. In the forward | 100.0 | |
| PLN02960 | 897 | alpha-amylase | 100.0 | |
| PRK14705 | 1224 | glycogen branching enzyme; Provisional | 100.0 | |
| PLN02447 | 758 | 1,4-alpha-glucan-branching enzyme | 100.0 | |
| COG0366 | 505 | AmyA Glycosidases [Carbohydrate transport and meta | 100.0 | |
| TIGR02103 | 898 | pullul_strch alpha-1,6-glucosidases, pullulanase-t | 100.0 | |
| TIGR02455 | 688 | TreS_stutzeri trehalose synthase, Pseudomonas stut | 100.0 | |
| PLN02877 | 970 | alpha-amylase/limit dextrinase | 100.0 | |
| KOG0471 | 545 | consensus Alpha-amylase [Carbohydrate transport an | 100.0 | |
| COG0296 | 628 | GlgB 1,4-alpha-glucan branching enzyme [Carbohydra | 100.0 | |
| TIGR02401 | 825 | trehalose_TreY malto-oligosyltrehalose synthase. T | 100.0 | |
| COG1523 | 697 | PulA Type II secretory pathway, pullulanase PulA a | 100.0 | |
| KOG2212 | 504 | consensus Alpha-amylase [Carbohydrate transport an | 100.0 | |
| PRK14511 | 879 | maltooligosyl trehalose synthase; Provisional | 100.0 | |
| PLN03244 | 872 | alpha-amylase; Provisional | 100.0 | |
| KOG0470 | 757 | consensus 1,4-alpha-glucan branching enzyme/starch | 100.0 | |
| smart00642 | 166 | Aamy Alpha-amylase domain. | 99.95 | |
| PRK14507 | 1693 | putative bifunctional 4-alpha-glucanotransferase/m | 99.88 | |
| COG3280 | 889 | TreY Maltooligosyl trehalose synthase [Carbohydrat | 99.82 | |
| TIGR01531 | 1464 | glyc_debranch glycogen debranching enzymye. glycog | 99.77 | |
| PF14872 | 811 | GHL5: Hypothetical glycoside hydrolase 5 | 99.33 | |
| PF14701 | 423 | hDGE_amylase: glucanotransferase domain of human g | 99.0 | |
| PF02324 | 809 | Glyco_hydro_70: Glycosyl hydrolase family 70; Inte | 98.95 | |
| PF02324 | 809 | Glyco_hydro_70: Glycosyl hydrolase family 70; Inte | 98.54 | |
| PF02638 | 311 | DUF187: Glycosyl hydrolase like GH101; InterPro: I | 98.5 | |
| PF14871 | 132 | GHL6: Hypothetical glycosyl hydrolase 6 | 98.38 | |
| PF07821 | 59 | Alpha-amyl_C2: Alpha-amylase C-terminal beta-sheet | 98.23 | |
| PF11941 | 89 | DUF3459: Domain of unknown function (DUF3459); Int | 98.07 | |
| KOG3625 | 1521 | consensus Alpha amylase [Carbohydrate transport an | 97.89 | |
| COG1649 | 418 | Uncharacterized protein conserved in bacteria [Fun | 97.77 | |
| smart00810 | 61 | Alpha-amyl_C2 Alpha-amylase C-terminal beta-sheet | 97.71 | |
| PLN02635 | 538 | disproportionating enzyme | 97.66 | |
| PRK14508 | 497 | 4-alpha-glucanotransferase; Provisional | 97.62 | |
| cd06592 | 303 | GH31_glucosidase_KIAA1161 KIAA1161 is an uncharact | 97.46 | |
| cd06593 | 308 | GH31_xylosidase_YicI YicI alpha-xylosidase is a gl | 97.44 | |
| cd06597 | 340 | GH31_transferase_CtsY CtsY (cyclic tetrasaccharide | 97.29 | |
| PF02065 | 394 | Melibiase: Melibiase; InterPro: IPR000111 O-Glycos | 97.22 | |
| cd06599 | 317 | GH31_glycosidase_Aec37 Glycosyl hydrolase family 3 | 97.06 | |
| PF13199 | 559 | Glyco_hydro_66: Glycosyl hydrolase family 66; PDB: | 96.79 | |
| PF13200 | 316 | DUF4015: Putative glycosyl hydrolase domain | 96.6 | |
| PRK14507 | 1693 | putative bifunctional 4-alpha-glucanotransferase/m | 96.34 | |
| cd06594 | 317 | GH31_glucosidase_YihQ YihQ is a bacterial alpha-gl | 96.34 | |
| PF14488 | 166 | DUF4434: Domain of unknown function (DUF4434) | 96.33 | |
| PRK14582 | 671 | pgaB outer membrane N-deacetylase; Provisional | 96.26 | |
| COG3280 | 889 | TreY Maltooligosyl trehalose synthase [Carbohydrat | 96.23 | |
| cd06591 | 319 | GH31_xylosidase_XylS XylS is a glycosyl hydrolase | 96.18 | |
| PF00150 | 281 | Cellulase: Cellulase (glycosyl hydrolase family 5) | 95.14 | |
| cd06602 | 339 | GH31_MGAM_SI_GAA This family includes the followin | 95.0 | |
| cd06598 | 317 | GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide | 94.96 | |
| PRK10658 | 665 | putative alpha-glucosidase; Provisional | 94.94 | |
| PF07745 | 332 | Glyco_hydro_53: Glycosyl hydrolase family 53; Inte | 94.94 | |
| COG3589 | 360 | Uncharacterized conserved protein [Function unknow | 94.89 | |
| cd06542 | 255 | GH18_EndoS-like Endo-beta-N-acetylglucosaminidases | 94.83 | |
| PRK10426 | 635 | alpha-glucosidase; Provisional | 94.8 | |
| cd06600 | 317 | GH31_MGAM-like This family includes the following | 94.78 | |
| PF05913 | 357 | DUF871: Bacterial protein of unknown function (DUF | 94.51 | |
| PF01055 | 441 | Glyco_hydro_31: Glycosyl hydrolases family 31 ; In | 93.74 | |
| KOG3625 | 1521 | consensus Alpha amylase [Carbohydrate transport an | 93.67 | |
| cd06562 | 348 | GH20_HexA_HexB-like Beta-N-acetylhexosaminidases c | 93.46 | |
| PF02446 | 496 | Glyco_hydro_77: 4-alpha-glucanotransferase; InterP | 93.43 | |
| TIGR00217 | 513 | malQ 4-alpha-glucanotransferase. This enzyme is kn | 93.35 | |
| smart00632 | 81 | Aamy_C Aamy_C domain. | 92.72 | |
| cd06604 | 339 | GH31_glucosidase_II_MalA Alpha-glucosidase II (alp | 92.61 | |
| cd02875 | 358 | GH18_chitobiase Chitobiase (also known as di-N-ace | 92.51 | |
| cd06570 | 311 | GH20_chitobiase-like_1 A functionally uncharacteri | 92.41 | |
| cd06595 | 292 | GH31_xylosidase_XylS-like This family represents a | 92.37 | |
| cd06589 | 265 | GH31 The enzymes of glycosyl hydrolase family 31 ( | 92.24 | |
| cd06545 | 253 | GH18_3CO4_chitinase The Bacteroides thetaiotaomicr | 92.07 | |
| cd06568 | 329 | GH20_SpHex_like A subgroup of the Glycosyl hydrola | 92.04 | |
| cd06601 | 332 | GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) | 91.95 | |
| PLN02950 | 909 | 4-alpha-glucanotransferase | 91.86 | |
| COG1501 | 772 | Alpha-glucosidases, family 31 of glycosyl hydrolas | 91.78 | |
| KOG1065 | 805 | consensus Maltase glucoamylase and related hydrola | 91.76 | |
| PRK11052 | 695 | malQ 4-alpha-glucanotransferase; Provisional | 91.39 | |
| PF02806 | 95 | Alpha-amylase_C: Alpha amylase, C-terminal all-bet | 91.17 | |
| PLN02763 | 978 | hydrolase, hydrolyzing O-glycosyl compounds | 90.33 | |
| PF10438 | 78 | Cyc-maltodext_C: Cyclo-malto-dextrinase C-terminal | 90.31 | |
| cd06603 | 339 | GH31_GANC_GANAB_alpha This family includes the clo | 89.91 | |
| cd06564 | 326 | GH20_DspB_LnbB-like Glycosyl hydrolase family 20 ( | 89.63 | |
| PLN03236 | 745 | 4-alpha-glucanotransferase; Provisional | 89.58 | |
| cd06569 | 445 | GH20_Sm-chitobiase-like The chitobiase of Serratia | 89.55 | |
| PF02449 | 374 | Glyco_hydro_42: Beta-galactosidase; InterPro: IPR0 | 89.42 | |
| PRK11052 | 695 | malQ 4-alpha-glucanotransferase; Provisional | 89.26 | |
| cd02871 | 312 | GH18_chitinase_D-like GH18 domain of Chitinase D ( | 89.11 | |
| COG1640 | 520 | MalQ 4-alpha-glucanotransferase [Carbohydrate tran | 89.03 | |
| TIGR01370 | 315 | cysRS possible cysteinyl-tRNA synthetase, Methanoc | 86.91 | |
| cd06546 | 256 | GH18_CTS3_chitinase GH18 domain of CTS3 (chitinase | 86.16 | |
| PRK14510 | 1221 | putative bifunctional 4-alpha-glucanotransferase/g | 85.68 | |
| cd06563 | 357 | GH20_chitobiase-like The chitobiase of Serratia ma | 85.54 | |
| PF14883 | 294 | GHL13: Hypothetical glycosyl hydrolase family 13 | 84.92 | |
| PF03198 | 314 | Glyco_hydro_72: Glucanosyltransferase; InterPro: I | 84.85 | |
| PF13380 | 116 | CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5 | 84.82 | |
| cd02874 | 313 | GH18_CFLE_spore_hydrolase Cortical fragment-lytic | 84.77 | |
| cd06565 | 301 | GH20_GcnA-like Glycosyl hydrolase family 20 (GH20) | 84.48 | |
| TIGR03849 | 237 | arch_ComA phosphosulfolactate synthase. This model | 84.26 | |
| PF01301 | 319 | Glyco_hydro_35: Glycosyl hydrolases family 35; Int | 84.09 | |
| PF10566 | 273 | Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: | 83.95 | |
| PF11852 | 168 | DUF3372: Domain of unknown function (DUF3372); Int | 83.76 | |
| smart00812 | 384 | Alpha_L_fucos Alpha-L-fucosidase. O-Glycosyl hydro | 82.32 | |
| TIGR03356 | 427 | BGL beta-galactosidase. | 81.97 | |
| cd02742 | 303 | GH20_hexosaminidase Beta-N-acetylhexosaminidases o | 81.38 | |
| COG3867 | 403 | Arabinogalactan endo-1,4-beta-galactosidase [Carbo | 80.27 | |
| PF02679 | 244 | ComA: (2R)-phospho-3-sulfolactate synthase (ComA); | 80.26 | |
| PLN03236 | 745 | 4-alpha-glucanotransferase; Provisional | 80.17 |
| >PLN02361 alpha-amylase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-83 Score=624.27 Aligned_cols=393 Identities=87% Similarity=1.514 Sum_probs=351.0
Q ss_pred eccCceeEEEeeecCCCCCCcHHHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCHHHHHHHHHHHH
Q 014892 24 IRNGREILFQGFNWESCKHDWWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMK 103 (416)
Q Consensus 24 ~~~~~~~~~q~f~~~~~~~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH 103 (416)
...++.||+|+|+|++++..+|++|++|||||++||||+|||+|++++.++|||+|.|||+++|+|||++||++||++||
T Consensus 7 ~~~~~~v~lQ~F~W~~~~~~~w~~i~~kl~~l~~lG~t~iwl~P~~~~~~~~GY~~~d~y~~~~~~Gt~~el~~li~~~h 86 (401)
T PLN02361 7 IRNGREILLQAFNWESHKHDWWRNLEGKVPDLAKSGFTSAWLPPPSQSLAPEGYLPQNLYSLNSAYGSEHLLKSLLRKMK 86 (401)
T ss_pred hcCCCcEEEEEEeccCCccHHHHHHHHHHHHHHHcCCCEEEeCCCCcCCCCCCCCcccccccCcccCCHHHHHHHHHHHH
Confidence 34578999999999998778999999999999999999999999999999999999999999999999999999999999
Q ss_pred HCCCEEEEEEccccCcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHH
Q 014892 104 QHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRW 183 (416)
Q Consensus 104 ~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~ 183 (416)
++||+||+|+|+||++...++..+.|..|.+.+.+|++..++....+..+...+..+.++||||++||+||++++++++|
T Consensus 87 ~~gi~vi~D~V~NH~~g~~~~~~~~y~~~~g~~~~wd~~~~~~~~~g~~~~~~~~~~~~lpDLd~~np~Vr~~l~~~~~w 166 (401)
T PLN02361 87 QYNVRAMADIVINHRVGTTQGHGGMYNRYDGIPLPWDEHAVTSCTGGLGNRSTGDNFNGVPNIDHTQHFVRKDIIGWLIW 166 (401)
T ss_pred HcCCEEEEEEccccccCCCCCCCCCcccCCCCcCCCCccccccccCCCCCccCCCCCccCCccCCCCHHHHHHHHHHHHH
Confidence 99999999999999987766677777777654556776554433333333345566789999999999999999999998
Q ss_pred HHHhcCCCeEEecccCCCcHHHHHHHHHhcCCceEEEcccCCCCCC--CCCCCCccchhhHhHhhhhccCCCcccccCch
Q 014892 184 LRNTVGFQDFRFDFARGYSAKYVKEYIEGARPIFSVGEYWDSCNYN--SHGLDYNQDSHRQRIINWIDGTGQLSAAFDFT 261 (416)
Q Consensus 184 w~~~~gvDGfRlD~a~~~~~~~~~~~~~~~~~~~~vgE~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~ 261 (416)
|++++||||||+|+|++++.+||++++++++|.|+|||+|++..+. ++.++|.++..++.+..|++.+++..++|||+
T Consensus 167 l~~~~GiDGfRlDavk~~~~~f~~~~~~~~~p~f~VGE~w~~~~~~~~d~~~~y~~~~~~~~l~~~~~~~~~~~~~fDF~ 246 (401)
T PLN02361 167 LRNDVGFQDFRFDFAKGYSAKFVKEYIEAAKPLFSVGEYWDSCNYSGPDYRLDYNQDSHRQRIVNWIDGTGGLSAAFDFT 246 (401)
T ss_pred HHhcCCCCEEEEeccccCCHHHHHHHHHhhCCeEEEEEEecCCCcCCcccccchhhhhHHHHHHHHHHhcCCcceeecHH
Confidence 8877999999999999999999999999999999999999875442 45678887777888999999777788999999
Q ss_pred hhHHHHHHhcCchhhhhhhcCCCCCccccccCcceecccCCCCCCCCCCCCCChhhHHHHHHHHhcCCCeeEEecCCcCC
Q 014892 262 TKGILQEAVKGQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFPSNHIMEGYAYILMHPGIPSVFYDHFYD 341 (416)
Q Consensus 262 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~fl~nHD~~R~~~~~~~~~~~~~~a~a~llt~pGiP~Iy~G~E~g 341 (416)
++..+.+++.++.+++.+..++.+.+.+..|.++|+||+|||++|+++.++.+..+.++|+|++||.||+||||||+.++
T Consensus 247 l~~~l~~a~~~~~~~l~~~~~~~~~~~~~~p~~aVTFvdNHDt~r~~~~~~~~~~~~~~AyA~iLT~pG~P~Vyyg~~~~ 326 (401)
T PLN02361 247 TKGILQEAVKGQWWRLRDAQGKPPGVMGWWPSRAVTFIDNHDTGSTQAHWPFPSDHIMEGYAYILTHPGIPTVFYDHFYD 326 (401)
T ss_pred HHHHHHHHHhhhHHHHhhhhcCCcchhhcChhhceEecccCcCcchhhccCCchHHHHHHHHHHHCCCCcCeEeeccccC
Confidence 99999999976677887777665667778899999999999999999988877889999999999999999999999999
Q ss_pred CchhHHHHHHHHHHHHHhCcccCCCCeEEEEecCCEEEEEECCEEEEEEcCCCCCCCCCCcEEeeeCCceEEeeC
Q 014892 342 WGDSIHNQIVKLMDVRRQQDIHSRSSIKILEAQSNLYSAIIGDKVCMKIGDGSWCPAGKEWTLATSGHKYAVWHK 416 (416)
Q Consensus 342 w~~~l~~~~~~Li~lR~~~~~l~~G~~~~~~~~~~~~~~~R~~~~lvvinn~~~~~~~~~~~~~ls~~~~~~~~~ 416 (416)
|+.++++.|++|++|||++++++.|+++++.+++++++...+++++|-|++....|++.+|+++.||.+|+||++
T Consensus 327 ~~~~~~~~I~~Li~lRk~~~~~~~s~~~i~~a~~~~y~a~i~~~~~~k~g~~~~~p~~~~~~~~~~g~~~~~w~~ 401 (401)
T PLN02361 327 WGGSIHDQIVKLIDIRKRQDIHSRSSIRILEAQSNLYSAIIDEKLCMKIGDGSWCPSGREWTLATSGHRYAVWHK 401 (401)
T ss_pred CChHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCeEEEEECCeEEEEecCCCCCCCCCCceEEEecCceEEeeC
Confidence 998999999999999999999999999999999999999999999999999998888778999999999999986
|
|
| >PLN00196 alpha-amylase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-80 Score=611.95 Aligned_cols=386 Identities=48% Similarity=0.986 Sum_probs=328.4
Q ss_pred CceeEEEeeecCCCC--CCcHHHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCC-CCCCCHHHHHHHHHHHH
Q 014892 27 GREILFQGFNWESCK--HDWWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLN-SSYGSEHLLKALLHKMK 103 (416)
Q Consensus 27 ~~~~~~q~f~~~~~~--~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id-~~~Gt~~d~~~Lv~~aH 103 (416)
+.++|+|+|+|++.+ .|+++||++||||||+||||+|||+|++++.++|||+|.|||+|+ ++|||++||++||++||
T Consensus 23 ~~~v~~Q~F~W~~~~~~gg~~~~i~~kldyL~~LGvtaIWL~P~~~s~s~hGY~~~D~y~ld~~~fGt~~elk~Lv~~aH 102 (428)
T PLN00196 23 AGQVLFQGFNWESWKQNGGWYNFLMGKVDDIAAAGITHVWLPPPSHSVSEQGYMPGRLYDLDASKYGNEAQLKSLIEAFH 102 (428)
T ss_pred CCCEEEEeeccCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCccccCCCCcccCCCHHHHHHHHHHHH
Confidence 558999999999843 379999999999999999999999999999999999999999999 69999999999999999
Q ss_pred HCCCEEEEEEccccCcCCCCCCCCcccccCC----CCCCCCCCceec----CCCCCCCCCCCCCCCCCCcCCCCCHHHHH
Q 014892 104 QHKVRAMADIVINHRVGTTQGHGGKYNRYDG----IPLSWDEHAVTS----CTGGLGNGSTGDNFHGVPNIDHTQHFVRK 175 (416)
Q Consensus 104 ~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~----~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~dln~~~~~v~~ 175 (416)
++||+||+|+|+||++.++....+.|..|.+ ...+|.+...+. +.++..+...++++.++||||++||+||+
T Consensus 103 ~~GIkVilDvV~NH~~~~~~~~~~~y~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~lpDLn~~np~V~~ 182 (428)
T PLN00196 103 GKGVQVIADIVINHRTAEHKDGRGIYCLFEGGTPDSRLDWGPHMICRDDTQYSDGTGNLDTGADFAAAPDIDHLNKRVQR 182 (428)
T ss_pred HCCCEEEEEECccCcccccccCCCceEECCCCCCCCccccccccCCCCcccccCCCCceeCCCCCCCCCccCCCCHHHHH
Confidence 9999999999999999887654444544432 123454322221 22233333455678899999999999999
Q ss_pred HHHHHHHHHHHhcCCCeEEecccCCCcHHHHHHHHHhcCCceEEEcccCCCCC-CCCCCCCccchhhHhHhhhhccCCCc
Q 014892 176 DIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGARPIFSVGEYWDSCNY-NSHGLDYNQDSHRQRIINWIDGTGQL 254 (416)
Q Consensus 176 ~l~~~~~~w~~~~gvDGfRlD~a~~~~~~~~~~~~~~~~~~~~vgE~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~ 254 (416)
+|+++++||++++||||||+|+|++++.+|++++.++.+|.|+|||+|+++++ +.++..|.++.+++.+..|++.+++.
T Consensus 183 ~l~~~~~wl~~~~GiDG~RlD~ak~~~~~f~~~~v~~~~p~f~VGE~W~~~~~~~~~~~~~~~~~~r~~l~~~l~~~g~~ 262 (428)
T PLN00196 183 ELIGWLLWLKSDIGFDAWRLDFAKGYSAEVAKVYIDGTEPSFAVAEIWTSMAYGGDGKPEYDQNAHRQELVNWVDRVGGA 262 (428)
T ss_pred HHHHHHHHHhhCCCCCEEEeehhhhCCHHHHHHHHHccCCcEEEEEEeccccccccCCccccchhhHHHHHHHHHhcCCc
Confidence 99999999988899999999999999999999999888899999999998665 46677777766788888999876532
Q ss_pred ---ccccCchhhHHHHHHhcCchhhhhhhcCCCCCccccccCcceecccCCCCCCCCCCCCCChhhHHHHHHHHhcCCCe
Q 014892 255 ---SAAFDFTTKGILQEAVKGQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFPSNHIMEGYAYILMHPGI 331 (416)
Q Consensus 255 ---~~~fdf~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~fl~nHD~~R~~~~~~~~~~~~~~a~a~llt~pGi 331 (416)
.++|||++...+..++.++.+++++......++....|..+|||++|||++|+++.+..+.+++++|+|++||+||+
T Consensus 263 ~~~~~~fDF~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~P~~aVtFvdNHDT~r~~~~~~~~~~~~~lAyA~iLT~pG~ 342 (428)
T PLN00196 263 ASPATVFDFTTKGILNVAVEGELWRLRGADGKAPGVIGWWPAKAVTFVDNHDTGSTQHMWPFPSDKVMQGYAYILTHPGN 342 (428)
T ss_pred cCcceeecccchHHHHHHhcCCchhhhhhcccCcchhhcChhhceeeccCCCCccccccCCCccchHHHHHHHHHcCCCc
Confidence 45899999887766776666666665544445566789999999999999999998876677889999999999999
Q ss_pred eEEecCCcCCCchhHHHHHHHHHHHHHhCcccCCCCeEEEEecCCEEEEEECCEEEEEEcCC----CCCCCCCCcEEeee
Q 014892 332 PSVFYDHFYDWGDSIHNQIVKLMDVRRQQDIHSRSSIKILEAQSNLYSAIIGDKVCMKIGDG----SWCPAGKEWTLATS 407 (416)
Q Consensus 332 P~Iy~G~E~gw~~~l~~~~~~Li~lR~~~~~l~~G~~~~~~~~~~~~~~~R~~~~lvvinn~----~~~~~~~~~~~~ls 407 (416)
||||||+-|+|+ +.+.|++|+++||++++++.|+++++.++++++++.|+++++|.||+. +..|+ +|++++|
T Consensus 343 P~IyYg~~~~~~--~~~~i~~Li~~Rk~~~~~~~g~~~~~~a~~d~yv~~~~~~~~~~i~~~~~~~~~~~~--~~~~~~~ 418 (428)
T PLN00196 343 PCIFYDHFFDWG--LKEEIAALVSIRNRNGITPTSELRIMEADADLYLAEIDGKVIVKIGSRYDVSHLIPE--GFQVVAH 418 (428)
T ss_pred ceEeeCCCcCcc--HHHHHHHHHHHHHhCCCcCCccEEEEEecCCEEEEEECCEEEEEECCCCCccccCcc--cceEEEe
Confidence 999999999996 889999999999999999999999999999999999999999999995 45564 5999999
Q ss_pred CCceEEeeC
Q 014892 408 GHKYAVWHK 416 (416)
Q Consensus 408 ~~~~~~~~~ 416 (416)
|.+|+||++
T Consensus 419 g~~~~~w~~ 427 (428)
T PLN00196 419 GNGYAVWEK 427 (428)
T ss_pred cCCeEEEec
Confidence 999999986
|
|
| >PLN02784 alpha-amylase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-74 Score=590.03 Aligned_cols=396 Identities=52% Similarity=1.022 Sum_probs=348.4
Q ss_pred ceeeeeeeccCceeEEEeeecCCCCCC-cHHHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCHHHH
Q 014892 17 LVKIRAVIRNGREILFQGFNWESCKHD-WWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLL 95 (416)
Q Consensus 17 ~~~~~~~~~~~~~~~~q~f~~~~~~~G-~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~ 95 (416)
-.|+.+....++++|+|+|+|+++++| ++++|+++||||++||||+|||+|++++.+++||+|.|||+++++|||.+||
T Consensus 491 ~~~~~~~~~~~~eVmlQgF~Wds~~dg~w~~~I~ekldyL~~LG~taIWLpP~~~s~s~~GY~p~D~y~lds~yGT~~EL 570 (894)
T PLN02784 491 PIKICSGTGSGFEILCQGFNWESHKSGRWYMELGEKAAELSSLGFTVVWLPPPTESVSPEGYMPKDLYNLNSRYGTIDEL 570 (894)
T ss_pred cccccccccCCceEEEEeEEcCcCCCCchHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCCcCcccccccCcCcCCHHHH
Confidence 345566688889999999999998886 7899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCEEEEEEccccCcCCCCCCCCcccccCCCCCCCCCCceecCC---CCCCCCCCCCCCCCCCcCCCCCHH
Q 014892 96 KALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCT---GGLGNGSTGDNFHGVPNIDHTQHF 172 (416)
Q Consensus 96 ~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~dln~~~~~ 172 (416)
++||++||++||+||+|+|+||++..+...++.|..|.+ ..+|++..++... .+.++...+.+|..+||||+.||+
T Consensus 571 k~LI~a~H~~GIkVIlDiViNH~ag~f~~~~g~~~~f~g-~~dW~d~~i~~ddp~F~GrG~~~sgddf~~lPDLDh~npe 649 (894)
T PLN02784 571 KDLVKSFHEVGIKVLGDAVLNHRCAHFQNQNGVWNIFGG-RLNWDDRAVVADDPHFQGRGNKSSGDNFHAAPNIDHSQDF 649 (894)
T ss_pred HHHHHHHHHCCCEEEEEECcccccccccCCCCcccccCC-eecCCCCcccCCCcccCCcCCcCcccccCcCCcCCCCCHH
Confidence 999999999999999999999999765544555655554 3456654333211 122333455678899999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCeEEecccCCCcHHHHHHHHHhcCCceEEEcccCCCCCCCCCCCCccchhhHhHhhhhccCC
Q 014892 173 VRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGARPIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTG 252 (416)
Q Consensus 173 v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~~~~~~~~~~~~~~~~vgE~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 252 (416)
||++|+++++||++++||||||+|+|++++..|+++++++.+|.|+|||+|++..+..+.++|.++.+++.|..|++.++
T Consensus 650 VR~eL~~WlkWL~~e~G~DGfRLDaVKgf~~~Fvkeyv~a~kp~F~VGEyWd~~~~~~g~~~Ynqd~~rq~l~dwi~~tg 729 (894)
T PLN02784 650 VRKDLKEWLCWMRKEVGYDGWRLDFVRGFWGGYVKDYMEASEPYFAVGEYWDSLSYTYGEMDYNQDAHRQRIVDWINATN 729 (894)
T ss_pred HHHHHHHHHHHHHhccCCCEEEEeccCCCCHHHHHHHHhccCCcEEEEEeccccccccCccccCchhHHHHHHHHHHhCC
Confidence 99999999999998999999999999999999999999999899999999999777678899999999999999999888
Q ss_pred CcccccCchhhHHHHHHhc-CchhhhhhhcCCCCCccccccCcceecccCCCCCCCCCCCCCChhhHHHHHHHHhcCCCe
Q 014892 253 QLSAAFDFTTKGILQEAVK-GQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFPSNHIMEGYAYILMHPGI 331 (416)
Q Consensus 253 ~~~~~fdf~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~fl~nHD~~R~~~~~~~~~~~~~~a~a~llt~pGi 331 (416)
+..++|||++++.|.+++. ++.+++.+..++.+++++.+|.++|+||+|||+.+.++.+.++..+..+|||++||.||+
T Consensus 730 g~~saFDfplk~~L~~A~~~~e~wrL~d~~g~~~glv~~~P~~AVTFVDNHDTg~~Q~~w~~p~~k~~~AYAyILthpG~ 809 (894)
T PLN02784 730 GTAGAFDVTTKGILHSALERCEYWRLSDQKGKPPGVVGWWPSRAVTFIENHDTGSTQGHWRFPEGKEMQGYAYILTHPGT 809 (894)
T ss_pred CceeeechhHHHHHHHHHhccchhhhhhccCCCCCeeccccCceEEEecCCCCCCCcccCCCCccchhhHHHHHHcCCCc
Confidence 8889999999999999995 567888877777778889999999999999999998887776766788899999999999
Q ss_pred eEEecCCcCCCchhHHHHHHHHHHHHHhCcccCCCCeEEEEecCCEEEEEECCEEEEEEcCCCCCCCC--CCcEEeeeCC
Q 014892 332 PSVFYDHFYDWGDSIHNQIVKLMDVRRQQDIHSRSSIKILEAQSNLYSAIIGDKVCMKIGDGSWCPAG--KEWTLATSGH 409 (416)
Q Consensus 332 P~Iy~G~E~gw~~~l~~~~~~Li~lR~~~~~l~~G~~~~~~~~~~~~~~~R~~~~lvvinn~~~~~~~--~~~~~~ls~~ 409 (416)
||||||+.|+ .+.+.|++||.+||..-.-....++++.++.++|+...+++++|-|++.+..|++ .+|++++||.
T Consensus 810 PcVFy~h~y~---~~~~~I~~Li~iRk~~gI~~~S~v~i~~a~~~~Y~a~i~~k~~~kiG~~~~~p~~~~~~~~~~~sG~ 886 (894)
T PLN02784 810 PAVFYDHIFS---HYHPEIASLISLRNRQKIHCRSEVKITKAERDVYAAIIDEKVAMKIGPGHYEPPNGPQNWSVALEGQ 886 (894)
T ss_pred ceEEehhhhh---hhHHHHHHHHHHHHHcCCCCCCceeEEEecCCcEEEEeCCeeEEEECCcccCCCCCCCceEEEEecC
Confidence 9999999985 3577799999999999888889999999999999999999999999999888753 3799999999
Q ss_pred ceEEeeC
Q 014892 410 KYAVWHK 416 (416)
Q Consensus 410 ~~~~~~~ 416 (416)
+|+||++
T Consensus 887 ~yavW~k 893 (894)
T PLN02784 887 DYKVWET 893 (894)
T ss_pred CeEEEeC
Confidence 9999986
|
|
| >PRK09441 cytoplasmic alpha-amylase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-69 Score=545.90 Aligned_cols=349 Identities=26% Similarity=0.465 Sum_probs=268.4
Q ss_pred CceeEEEeeecCCCCCC-cHHHHHhhhhhHHHcCCCEEEeCCCCCCCC---CCCcccccCC---------CCCCCCCCHH
Q 014892 27 GREILFQGFNWESCKHD-WWRNLERKVPDISKSGFTSVWLPPATHSFA---PEGYLPQNLY---------SLNSSYGSEH 93 (416)
Q Consensus 27 ~~~~~~q~f~~~~~~~G-~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~---~~GY~~~d~~---------~id~~~Gt~~ 93 (416)
+.+||+|+|+|+++.+| +|+||++|||||++||||+|||+||+++.+ +|||++.||| +|||+|||++
T Consensus 2 ~~~~~~q~f~w~~~~~~~~~~~I~~kldyl~~LGvtaIwl~P~~~~~~~~~~hgY~~~D~~~~~~~~~~~~id~~fGt~~ 81 (479)
T PRK09441 2 RNGTMMQYFEWYLPNDGKLWNRLAERAPELAEAGITAVWLPPAYKGTSGGYDVGYGVYDLFDLGEFDQKGTVRTKYGTKE 81 (479)
T ss_pred CCceEEEEEEeccCCCccHHHHHHHHHHHHHHcCCCEEEeCCCccCCCCCCCCCCCeecccccccccccCCcCcCcCCHH
Confidence 56899999999998876 677999999999999999999999999874 6999999999 7999999999
Q ss_pred HHHHHHHHHHHCCCEEEEEEccccCcCCCC--CCC-------------------CcccccCCC----C-----CCCCCCc
Q 014892 94 LLKALLHKMKQHKVRAMADIVINHRVGTTQ--GHG-------------------GKYNRYDGI----P-----LSWDEHA 143 (416)
Q Consensus 94 d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~--~~~-------------------~~~~~f~~~----~-----~~~~~~~ 143 (416)
|||+||++||++||+||+|+|+||++..+. |+. ..|.+|... . ..|...+
T Consensus 82 dl~~Li~~~H~~Gi~vi~D~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (479)
T PRK09441 82 ELLNAIDALHENGIKVYADVVLNHKAGADEKETFRVVEVDPDDRTQIISEPYEIEGWTRFTFPGRGGKYSDFKWHWYHFS 161 (479)
T ss_pred HHHHHHHHHHHCCCEEEEEECcccccCCCcceeeeeeeeCccccccccCCceeecccccccCCCCCCcCCcceeCCcCCC
Confidence 999999999999999999999999996432 321 001111100 0 0111100
Q ss_pred eecCC---------------CCCCC----CCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcHH
Q 014892 144 VTSCT---------------GGLGN----GSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAK 204 (416)
Q Consensus 144 ~~~~~---------------~~~~~----~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~~ 204 (416)
...+. .+|.. ...++.+..+||||++||+|+++|++++++|++++||||||+|+|++++.+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~lpDLn~~np~V~~~l~~~~~~w~~~~giDGfRlDavk~v~~~ 241 (479)
T PRK09441 162 GTDYDENPDESGIFKIVGDGKGWDDQVDDENGNFDYLMGADIDFRHPEVREELKYWAKWYMETTGFDGFRLDAVKHIDAW 241 (479)
T ss_pred CcccccccCcCceEEecCCCCCCccccccccCCcccccccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEhhhcCCCHH
Confidence 00000 11110 112334567999999999999999999999997799999999999999999
Q ss_pred HHHHHHHhcC-----CceEEEcccCCCCCCCCCCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHhcC-chhhhh
Q 014892 205 YVKEYIEGAR-----PIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKG-QFWRLR 278 (416)
Q Consensus 205 ~~~~~~~~~~-----~~~~vgE~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~~~-~~~~~~ 278 (416)
||++++++++ +.+++||+|.+. .+.+..|+...+...++|||++.+.+.+++.+ ....+.
T Consensus 242 f~~~~~~~~~~~~~~~~~~vGE~~~~~--------------~~~~~~y~~~~~~~~~~~Df~~~~~l~~~~~~~~~~~l~ 307 (479)
T PRK09441 242 FIKEWIEHVREVAGKDLFIVGEYWSHD--------------VDKLQDYLEQVEGKTDLFDVPLHYNFHEASKQGRDYDMR 307 (479)
T ss_pred HHHHHHHHHHHhcCCCeEEEEeecCCC--------------hHHHHHHHHhcCCCceEecHHHHHHHHHHHhcCCccchH
Confidence 9999998864 368999999763 24566677654445679999999999998843 333333
Q ss_pred hhcCCCCCccccccCcceecccCCCCCCCCCCCCCCh-hhHHHHHHHHhcCC-CeeEEecCCcCCCc-----hhHHHHHH
Q 014892 279 DAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFPS-NHIMEGYAYILMHP-GIPSVFYDHFYDWG-----DSIHNQIV 351 (416)
Q Consensus 279 ~~~~~~~~~~~~~p~~~~~fl~nHD~~R~~~~~~~~~-~~~~~a~a~llt~p-GiP~Iy~G~E~gw~-----~~l~~~~~ 351 (416)
+.... ......|..+++|++|||++|+.+...... ...++|+++|||+| |+|+||||+|+++. .+++++|+
T Consensus 308 ~~~~~--~~~~~~~~~~~~FldNHD~~R~~~~~~~~~~~~~~lA~a~llT~p~GiP~IYYGdE~g~~g~~~~~~l~~~i~ 385 (479)
T PRK09441 308 NIFDG--TLVEADPFHAVTFVDNHDTQPGQALESPVEPWFKPLAYALILLREEGYPCVFYGDYYGASGYYIDMPFKEKLD 385 (479)
T ss_pred hhhCc--chhhcCcccceeeeccccCCCcccccccccccchHHHHHHHHhCCCCceeeEeccccCCCCCcccchHHHHHH
Confidence 33221 111234567899999999999988654222 23689999999999 99999999999875 36999999
Q ss_pred HHHHHHHhCcccCCCCeEEEEecCCEEEEEE-C----CEEEEEEcCCC
Q 014892 352 KLMDVRRQQDIHSRSSIKILEAQSNLYSAII-G----DKVCMKIGDGS 394 (416)
Q Consensus 352 ~Li~lR~~~~~l~~G~~~~~~~~~~~~~~~R-~----~~~lvvinn~~ 394 (416)
+|++|||++ +.|+...+..++++++|.| + +.++|||||++
T Consensus 386 ~Li~lRk~~---~~G~~~~~~~~~~~~~~~R~~~~~~~~vvvvinn~~ 430 (479)
T PRK09441 386 KLLLARKNF---AYGEQTDYFDHPNCIGWTRSGDEENPGLAVVISNGD 430 (479)
T ss_pred HHHHHHHHh---CCCCeeEeecCCCEEEEEEecCCCCccEEEEEECCC
Confidence 999999996 4799998988999999998 2 35888898854
|
|
| >PRK10785 maltodextrin glucosidase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-67 Score=548.02 Aligned_cols=323 Identities=18% Similarity=0.289 Sum_probs=243.5
Q ss_pred CcHHHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccccCcCCC
Q 014892 43 DWWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTT 122 (416)
Q Consensus 43 G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~ 122 (416)
|||+||++||||||+||||+|||+|||+++++|||++.||++|||+|||+++|++||++||++|||||||+|+||+|.+|
T Consensus 176 GDl~GI~~kLdYL~~LGv~~I~L~Pif~s~s~hgYd~~Dy~~iDp~~Gt~~df~~Lv~~aH~rGikVilD~V~NH~~~~~ 255 (598)
T PRK10785 176 GDLDGISEKLPYLKKLGVTALYLNPIFTAPSVHKYDTEDYRHVDPQLGGDAALLRLRHATQQRGMRLVLDGVFNHTGDSH 255 (598)
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEECCCcCCCCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCc-------ccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHH----HHHHHHHh-cCC
Q 014892 123 QGHGGK-------YNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIA----WLRWLRNT-VGF 190 (416)
Q Consensus 123 ~~~~~~-------~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~----~~~~w~~~-~gv 190 (416)
+|++.. |..-.+...+|.. .. .++....+ ..+..+|+||++||+||++|++ ++++|+++ +||
T Consensus 256 ~~f~~~~~~~~ga~~~~~spy~dwf~---~~-~~~~~~~w--~g~~~lPdLN~~np~v~~~l~~~~~~v~~~Wl~~~~gi 329 (598)
T PRK10785 256 PWFDRHNRGTGGACHHPDSPWRDWYS---FS-DDGRALDW--LGYASLPKLDFQSEEVVNEIYRGEDSIVRHWLKAPYNI 329 (598)
T ss_pred HHHHHhhccccccccCCCCCcceeeE---EC-CCCCcCCc--CCCCcCccccCCCHHHHHHHHhhhhHHHHHhhcCCCCC
Confidence 865321 1110000111210 00 01111111 1246899999999999999995 89999976 899
Q ss_pred CeEEecccCCCc--------HHHHHHHHHhcC---C-ceEEEcccCCCCCCCCCCCCccchhhHhHhhhhccCCCccccc
Q 014892 191 QDFRFDFARGYS--------AKYVKEYIEGAR---P-IFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAF 258 (416)
Q Consensus 191 DGfRlD~a~~~~--------~~~~~~~~~~~~---~-~~~vgE~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~f 258 (416)
||||||+|+.++ .+||++++++++ | .+++||+|.... .|+.. +..++++
T Consensus 330 DG~RlDva~~v~~~~~~~~~~~f~~~~~~~vk~~~pd~~ligE~~~~~~------------------~~l~~-~~~d~~m 390 (598)
T PRK10785 330 DGWRLDVVHMLGEGGGARNNLQHVAGITQAAKEENPEAYVLGEHFGDAR------------------QWLQA-DVEDAAM 390 (598)
T ss_pred cEEEEecHhHhccccCccccHHHHHHHHHHHHhhCCCeEEEEeccCChh------------------hhccC-ccccccc
Confidence 999999999884 589999988875 4 789999997521 11111 1223333
Q ss_pred Cc-hhhHHHHHHhcC----------chhhhhhhcCCCCCccccccC----cceecccCCCCCCCCCCCCCChhhHHHHHH
Q 014892 259 DF-TTKGILQEAVKG----------QFWRLRDAQGKPPGVMGWWPS----RAVTFLDNHDTGSTQAHWPFPSNHIMEGYA 323 (416)
Q Consensus 259 df-~~~~~l~~~~~~----------~~~~~~~~~~~~~~~~~~~p~----~~~~fl~nHD~~R~~~~~~~~~~~~~~a~a 323 (416)
++ .+...++..+.+ +...+...+.. .....|. ..+||++|||++|+.+.+..+..++++|++
T Consensus 391 ny~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~n~l~nHD~~R~~~~~~~~~~~~kla~~ 467 (598)
T PRK10785 391 NYRGFAFPLRAFLANTDIAYHPQQIDAQTCAAWMDE---YRAGLPHQQQLRQFNQLDSHDTARFKTLLGGDKARMPLALV 467 (598)
T ss_pred cchhhhhHHHHHhhccccccCccCCCHHHHHHHHHH---HHHhCCHHHHHHhhhccCCCccchhhhhhCCCHHHHHHHHH
Confidence 32 122222222211 11111111100 0001121 356999999999999988767778999999
Q ss_pred HHhcCCCeeEEecCCcCC--------------Cc-----hhHHHHHHHHHHHHHhCcccCCCCeEEEEecCCEEEEEE--
Q 014892 324 YILMHPGIPSVFYDHFYD--------------WG-----DSIHNQIVKLMDVRRQQDIHSRSSIKILEAQSNLYSAII-- 382 (416)
Q Consensus 324 ~llt~pGiP~Iy~G~E~g--------------w~-----~~l~~~~~~Li~lR~~~~~l~~G~~~~~~~~~~~~~~~R-- 382 (416)
++||+||+||||||||+| |+ .+++++||+||+|||++|+|+.|+++.+..++++++|.|
T Consensus 468 ll~t~pGiP~IYYGdE~G~~g~~dp~~R~~m~W~~~~~~~~l~~~~r~Li~lRk~~~aL~~G~~~~l~~~~~v~af~R~~ 547 (598)
T PRK10785 468 WLFTWPGVPCIYYGDEVGLDGGNDPFCRKPFPWDEAKQDGALLALYQRMIALRKKSQALRRGGCQVLYAEGNVVVFARVL 547 (598)
T ss_pred HHHhCCCCcEEEeeeeccccCCCCCCccCCcCCCcccCchHHHHHHHHHHHHHhhCcccccCcEEEEEeCCCEEEEEEEC
Confidence 999999999999999975 42 479999999999999999999999999998889999988
Q ss_pred -CCEEEEEEcCC
Q 014892 383 -GDKVCMKIGDG 393 (416)
Q Consensus 383 -~~~~lvvinn~ 393 (416)
+++++|++|++
T Consensus 548 ~~~~vlVviN~s 559 (598)
T PRK10785 548 QQQRVLVAINRG 559 (598)
T ss_pred CCCEEEEEEECC
Confidence 67899999997
|
|
| >TIGR02456 treS_nterm trehalose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-64 Score=516.25 Aligned_cols=367 Identities=16% Similarity=0.247 Sum_probs=267.8
Q ss_pred CceeEEEeeecCCCC-----CCcHHHHHhhhhhHHHcCCCEEEeCCCCCCCC-CCCcccccCCCCCCCCCCHHHHHHHHH
Q 014892 27 GREILFQGFNWESCK-----HDWWRNLERKVPDISKSGFTSVWLPPATHSFA-PEGYLPQNLYSLNSSYGSEHLLKALLH 100 (416)
Q Consensus 27 ~~~~~~q~f~~~~~~-----~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~-~~GY~~~d~~~id~~~Gt~~d~~~Lv~ 100 (416)
.+.||||+|...+.. .|||+||+++||||++||||+|||+||+++++ +|||++.||++|+|+|||++||++||+
T Consensus 4 ~~~viYqi~~~~f~d~~~~~~Gdl~gi~~~Ldyl~~LGv~~i~L~Pi~~~~~~~~gY~~~dy~~vd~~~Gt~~df~~Lv~ 83 (539)
T TIGR02456 4 KDAVFYEVHVRSFFDSNGDGIGDFPGLTSKLDYLKWLGVDALWLLPFFQSPLRDDGYDVSDYRAILPEFGTIDDFKDFVD 83 (539)
T ss_pred ccceEEEEehhHhhcCCCCCccCHHHHHHhHHHHHHCCCCEEEECCCcCCCCCCCCCCcccccccChhhCCHHHHHHHHH
Confidence 468999999987753 48999999999999999999999999999986 799999999999999999999999999
Q ss_pred HHHHCCCEEEEEEccccCcCCCCCCC-------Ccc---cccCCCCCCCCCCce--ecC-CCCCC-CC-----CCCCCCC
Q 014892 101 KMKQHKVRAMADIVINHRVGTTQGHG-------GKY---NRYDGIPLSWDEHAV--TSC-TGGLG-NG-----STGDNFH 161 (416)
Q Consensus 101 ~aH~~Gi~VilD~V~NH~~~~~~~~~-------~~~---~~f~~~~~~~~~~~~--~~~-~~~~~-~~-----~~~~~~~ 161 (416)
+||++||+||||+|+||++.+|+|+. +.| +.+.+....+..... +.. ...|. .+ .....+.
T Consensus 84 ~ah~~Gi~vilD~V~NH~s~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~y~~~f~~ 163 (539)
T TIGR02456 84 EAHARGMRVIIDLVLNHTSDQHPWFQEARSNPDGPYRDFYVWSDTDEKYKDTRIIFVDTEKSNWTFDPVAKQYYWHRFFS 163 (539)
T ss_pred HHHHCCCEEEEEeccCcCCCCCHHHHHHhhCCCCCCCceEEecCCCcccccccccccccCCCCccccCCcCeeEEecccC
Confidence 99999999999999999999998753 111 111110001110000 000 00010 00 0112356
Q ss_pred CCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCC-------------cHHHHHHHHHhcC---C-ceEEEcccC
Q 014892 162 GVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGY-------------SAKYVKEYIEGAR---P-IFSVGEYWD 224 (416)
Q Consensus 162 ~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~-------------~~~~~~~~~~~~~---~-~~~vgE~~~ 224 (416)
.+||||++||+||++|++++++|+ ++||||||||+++++ ..+||+++++.++ | .+++||++.
T Consensus 164 ~~pdln~~np~vr~~l~~~~~~w~-~~GvDGfRlDav~~~~~~~~~~~~~~p~~~~f~~~~~~~v~~~~p~~~~iaE~~~ 242 (539)
T TIGR02456 164 HQPDLNYDNPAVHDAVHDVMRFWL-DLGVDGFRLDAVPYLYEREGTSCENLPETHEFLKRLRKMVDREYPGRMLLAEANQ 242 (539)
T ss_pred CCCccCCCCHHHHHHHHHHHHHHH-HcCCCEEEEecHHhhhccCCCccCCCchHHHHHHHHHHHHHHhCCCeEEEEEeCC
Confidence 899999999999999999999999 699999999999876 3579999988775 4 689999753
Q ss_pred CCCCCCCCCCCccchhhHhHhhhhcc-CC-CcccccCchhhHHHHHHh-cCchhhhhhhcCCCCCccccccCcceecccC
Q 014892 225 SCNYNSHGLDYNQDSHRQRIINWIDG-TG-QLSAAFDFTTKGILQEAV-KGQFWRLRDAQGKPPGVMGWWPSRAVTFLDN 301 (416)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~l~~~~~~-~~-~~~~~fdf~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~fl~n 301 (416)
. ...+..|++. .+ +++++|+|++...+..++ .++...+...+...... ..+...++|++|
T Consensus 243 ~---------------~~~~~~y~~~~~~~~~d~~f~f~l~~~~~~~l~~~~~~~l~~~l~~~~~~--~~~~~~~~fl~n 305 (539)
T TIGR02456 243 W---------------PEEVVAYFGDEGDPECHMAFNFPVMPRIFMALRREDRSPIIDILKETPDI--PDSCQWCIFLRN 305 (539)
T ss_pred C---------------HHHHHHhhCCCCCCeeeeEEChhhhhhhhcccccCCHHHHHHHHHHhhhc--cCCCceeeecCC
Confidence 2 2344555543 22 578899999876555443 23333333222111000 012245689999
Q ss_pred CCCCC-------------------------------CCCCCCCChhhHHHHHHHHhcCCCeeEEecCCcCC---------
Q 014892 302 HDTGS-------------------------------TQAHWPFPSNHIMEGYAYILMHPGIPSVFYDHFYD--------- 341 (416)
Q Consensus 302 HD~~R-------------------------------~~~~~~~~~~~~~~a~a~llt~pGiP~Iy~G~E~g--------- 341 (416)
||++| +.+.+..+..++++|++++||+||+|+||||+|+|
T Consensus 306 HD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~s~~~~~~~~~kla~~~l~tlpG~P~IYYG~EiGm~~~~~~~~ 385 (539)
T TIGR02456 306 HDELTLEMVTDEERDFMYAAYAPDPRMRINLGIRRRLAPLLDNDRRRIELLTALLLSLPGSPILYYGDEIGMGDNIWLGD 385 (539)
T ss_pred CCccCccccChhhhhhhhhhccCCcchhcccchhhhhhhcccccHHHHHHHHHHHHhCCCceEEEechhhcCcCCCccCC
Confidence 99954 33444444567899999999999999999999985
Q ss_pred ---------Cc---------------------------------------hhHHHHHHHHHHHHHhCcccCCCCeEEEEe
Q 014892 342 ---------WG---------------------------------------DSIHNQIVKLMDVRRQQDIHSRSSIKILEA 373 (416)
Q Consensus 342 ---------w~---------------------------------------~~l~~~~~~Li~lR~~~~~l~~G~~~~~~~ 373 (416)
|+ .+++++||+||+|||++|+|+.|+++.+..
T Consensus 386 ~~~~R~pm~W~~~~~~gfs~~~~~~~~~p~~~~~~~~~~~~nv~~q~~~~~sll~~yr~Li~lRk~~~aL~~G~~~~l~~ 465 (539)
T TIGR02456 386 RNGVRTPMQWSPDRNAGFSSADPGQLFLPPVQDPVYGYQQVNVEAQLRDPSSLLHWTRRVLHVRKAHPAFGRGSLTFLPT 465 (539)
T ss_pred CcCccCCcCcCCCCCCCCCCCCCcccccccccccccccchhhHHHHhhCcccHHHHHHHHHHHHhcCcccccCceEEEec
Confidence 21 237999999999999999999999999887
Q ss_pred c-CCEEEEEE---CCEEEEEEcCCCCCC---------CCCCcEEeeeCCce
Q 014892 374 Q-SNLYSAII---GDKVCMKIGDGSWCP---------AGKEWTLATSGHKY 411 (416)
Q Consensus 374 ~-~~~~~~~R---~~~~lvvinn~~~~~---------~~~~~~~~ls~~~~ 411 (416)
+ +++++|.| +++++||+|++.... .+..+.+++++..+
T Consensus 466 ~~~~v~~f~R~~~~~~vlVv~N~s~~~~~v~l~~~~~~~~~~~dl~~~~~~ 516 (539)
T TIGR02456 466 GNRRVLAFLREYEGERVLCVFNFSRNPQAVELDLSEFAGRVPVELIGGAPF 516 (539)
T ss_pred CCCCEEEEEEEcCCcEEEEEEeCCCCCEEeeccccccccCcceecccCCcc
Confidence 4 46999988 678888898865321 12346666665543
|
Trehalose synthase interconverts maltose and alpha, alpha-trehalose by transglucosylation. This is one of at least three mechanisms for biosynthesis of trehalose, an important and widespread compatible solute. However, it is not driven by phosphate activation of sugars and its physiological role may tend toward trehalose degradation. This view is accentuated by numerous examples of fusion to a probable maltokinase domain. The sequence region described by this model is found both as the whole of a trehalose synthase and as the N-terminal region of a larger fusion protein that includes trehalose synthase activity. Several of these fused trehalose synthases have a domain homologous to proteins with maltokinase activity from Actinoplanes missouriensis and Streptomyces coelicolor (PubMed:15378530). |
| >PRK09505 malS alpha-amylase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-63 Score=516.25 Aligned_cols=342 Identities=18% Similarity=0.265 Sum_probs=251.8
Q ss_pred CceeEEEeeecCCC-------------C----------CCcHHHHHhhhhhHHHcCCCEEEeCCCCCC------------
Q 014892 27 GREILFQGFNWESC-------------K----------HDWWRNLERKVPDISKSGFTSVWLPPATHS------------ 71 (416)
Q Consensus 27 ~~~~~~q~f~~~~~-------------~----------~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~------------ 71 (416)
.+++|||+|...+. . .|||+||++||||||+||||+|||+||+++
T Consensus 188 ~~aviYqI~~DRF~nGd~~Nd~~~g~~~d~~~~~~~f~GGdl~Gi~~kLdyl~~LGv~aIwlsPi~~~~~~~~~~g~~g~ 267 (683)
T PRK09505 188 HNATVYFVLTDRFENGDPSNDHSYGRHKDGMQEIGTFHGGDLRGLTEKLDYLQQLGVNALWISSPLEQIHGWVGGGTKGD 267 (683)
T ss_pred ccCcEEEEehhhhcCCCcccccccCcCCCCccccCcccCCCHHHHHHhhHHHHHcCCCEEEeCccccccccccccccccC
Confidence 45889999876542 1 289999999999999999999999999986
Q ss_pred ---CCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccccCcCCCC------CCCC--------------c
Q 014892 72 ---FAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQ------GHGG--------------K 128 (416)
Q Consensus 72 ---~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~------~~~~--------------~ 128 (416)
.++|||++.||+.|||+|||++||++||++||++||+||||+|+||++..+. ++.. .
T Consensus 268 ~~~~~yhgY~~~D~~~id~~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~NH~~~~~~~d~~~~~f~~~~~~~~~~~~~~~~~ 347 (683)
T PRK09505 268 FPHYAYHGYYTLDWTKLDANMGTEADLRTLVDEAHQRGIRILFDVVMNHTGYATLADMQEFQFGALYLSGDENKKTLGER 347 (683)
T ss_pred CCcCCCCCCCccccccCCCCCCCHHHHHHHHHHHHHCCCEEEEEECcCCCcccccccccccchhhhhhhccccccccCcc
Confidence 2689999999999999999999999999999999999999999999996421 1111 1
Q ss_pred cc-ccCCCCCCCCCCc-eecCCCC--CCC----C---------------CCCCCCCCCCcCCCC----------------
Q 014892 129 YN-RYDGIPLSWDEHA-VTSCTGG--LGN----G---------------STGDNFHGVPNIDHT---------------- 169 (416)
Q Consensus 129 ~~-~f~~~~~~~~~~~-~~~~~~~--~~~----~---------------~~~~~~~~~~dln~~---------------- 169 (416)
|. |+...+.+|++.+ ...+.++ +.. . ...+....|||||++
T Consensus 348 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~wwg~~w~~~~~~~~~~~~~~~~~~~l~~LPdl~te~~~~~~lp~f~~~~p~ 427 (683)
T PRK09505 348 WSDWQPAAGQNWHSFNDYINFSDSTAWDKWWGKDWIRTDIGDYDNPGFDDLTMSLAFLPDIKTESTQASGLPVFYANKPD 427 (683)
T ss_pred cccccccccccccccccccccCCccccccccccccccccccccccccccccccccccCCcccccCccccccchhhhcCcc
Confidence 11 1111122333221 1111111 000 0 011223568888886
Q ss_pred -------CHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcHHHHHHHHHhcC------------------CceEEEcccC
Q 014892 170 -------QHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGAR------------------PIFSVGEYWD 224 (416)
Q Consensus 170 -------~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~~~~~~~~~~~~------------------~~~~vgE~~~ 224 (416)
||+||++|++++++|++++||||||+|+|++++.+||+++.+.++ +.+++||+|.
T Consensus 428 ~~~~~~~n~~Vr~yL~~~ik~Wv~e~GIDGfRlDaakhV~~~FW~~~~~~~~~~l~~~k~~~~d~~~~~~~~~~vGEvw~ 507 (683)
T PRK09505 428 TRAKAIDGYTPRDYLTHWLSQWVRDYGIDGFRVDTAKHVELPAWQQLKQEASAALAEWKKANPDKALDDAPFWMTGEAWG 507 (683)
T ss_pred cccccccCHHHHHHHHHHHHHHHHhcCCCEEEEechHhCCHHHHHHHHHHHHHHHHHHHHhccccccccCCeEEEEEecC
Confidence 459999999999999989999999999999999999999876541 3689999997
Q ss_pred CCCCCCCCCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHhc--CchhhhhhhcCCCCCccccccCcceecccCC
Q 014892 225 SCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVK--GQFWRLRDAQGKPPGVMGWWPSRAVTFLDNH 302 (416)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~fl~nH 302 (416)
... . ...|.. .++++++||++...+..++. ............. ..+...++|++||
T Consensus 508 ~~~--------------~-~~~y~~--~~fDsv~NF~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~~~~~l~FLdNH 565 (683)
T PRK09505 508 HGV--------------M-KSDYYR--HGFDAMINFDYQEQAAKAVDCLAQMDPTYQQMAEK-----LQDFNVLSYLSSH 565 (683)
T ss_pred Cch--------------h-hHHHHh--hcCccccCchHHHHHHHHHHHHHHHHHHHHHHhhh-----cCccceeecccCC
Confidence 521 0 122332 35889999998876655432 1122222211110 1122457899999
Q ss_pred CCCCCCCCCCCChhhHHHHHHHHhcCCCeeEEecCCcCC-------------------Cc------hhHHHHHHHHHHHH
Q 014892 303 DTGSTQAHWPFPSNHIMEGYAYILMHPGIPSVFYDHFYD-------------------WG------DSIHNQIVKLMDVR 357 (416)
Q Consensus 303 D~~R~~~~~~~~~~~~~~a~a~llt~pGiP~Iy~G~E~g-------------------w~------~~l~~~~~~Li~lR 357 (416)
|++|+.+..... .++++|++++||+||+|+||||||+| |+ .+++++||+|++||
T Consensus 566 Dt~Rf~s~~~~~-~~~klAaall~tlpGiP~IYYGdEiGm~gg~~g~DP~~~~R~~M~W~~~~~~~~~Ll~~~kkLi~LR 644 (683)
T PRK09505 566 DTRLFFEGGQSY-AKQRRAAELLLLAPGAVQIYYGDESARPFGPTGSDPLQGTRSDMNWQEVSGKSAALLAHWQKLGQFR 644 (683)
T ss_pred ChhhhhhhcCch-HHHHHHHHHHHhCCCCcEEEechhhCccCCCCCCCCcccccccCCccccccchHHHHHHHHHHHHHH
Confidence 999998876533 68899999999999999999999975 32 26999999999999
Q ss_pred HhCcccCCCCeEEEEecCCEEEEEE---CCEEEEEEcC
Q 014892 358 RQQDIHSRSSIKILEAQSNLYSAII---GDKVCMKIGD 392 (416)
Q Consensus 358 ~~~~~l~~G~~~~~~~~~~~~~~~R---~~~~lvvinn 392 (416)
+++|+|+.|+++.+. ++++++|.| +++++||+|-
T Consensus 645 k~~pAL~~G~~~~l~-~~~~~aF~R~~~~d~vlVv~~~ 681 (683)
T PRK09505 645 ARHPAIGAGKQTTLS-LKQYYAFVREHGDDKVMVVWAG 681 (683)
T ss_pred hhCHHhhCCceEEec-cCCEEEEEEEeCCCEEEEEEeC
Confidence 999999999999874 568999998 5677777763
|
|
| >TIGR02403 trehalose_treC alpha,alpha-phosphotrehalase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-62 Score=500.33 Aligned_cols=349 Identities=18% Similarity=0.248 Sum_probs=254.9
Q ss_pred CceeEEEeeecCCCC-----CCcHHHHHhhhhhHHHcCCCEEEeCCCCCCCCC-CCcccccCCCCCCCCCCHHHHHHHHH
Q 014892 27 GREILFQGFNWESCK-----HDWWRNLERKVPDISKSGFTSVWLPPATHSFAP-EGYLPQNLYSLNSSYGSEHLLKALLH 100 (416)
Q Consensus 27 ~~~~~~q~f~~~~~~-----~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~-~GY~~~d~~~id~~~Gt~~d~~~Lv~ 100 (416)
.+.||||+|.+.+.. .|||+||+++|+||++||||+|||+||+++++. +||++.||++|||+|||+++|++||+
T Consensus 3 ~~~v~Y~i~~~~f~~~~~~~~G~~~gi~~~l~yl~~lG~~~i~l~Pi~~~~~~~~gY~~~d~~~id~~~Gt~~~~~~lv~ 82 (543)
T TIGR02403 3 QKKVIYQIYPKSFYDSTGDGTGDLRGIIEKLDYLKKLGVDYIWLNPFYVSPQKDNGYDVSDYYAINPLFGTMADFEELVS 82 (543)
T ss_pred ccCEEEEEEhHHHhcCCCCCccCHHHHHHhHHHHHHcCCCEEEECCcccCCCCCCCCCccccCccCcccCCHHHHHHHHH
Confidence 358999999987653 389999999999999999999999999999864 69999999999999999999999999
Q ss_pred HHHHCCCEEEEEEccccCcCCCCCCCC------cccc---cCCC----CCCCCCCc---eecCCCCCCCCCCCCCCCCCC
Q 014892 101 KMKQHKVRAMADIVINHRVGTTQGHGG------KYNR---YDGI----PLSWDEHA---VTSCTGGLGNGSTGDNFHGVP 164 (416)
Q Consensus 101 ~aH~~Gi~VilD~V~NH~~~~~~~~~~------~~~~---f~~~----~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 164 (416)
+||++||+||||+|+||++.+|+|+.. .|.. +.+. +.+|.... .+.+...........+...+|
T Consensus 83 ~ah~~gi~vilD~v~NH~~~~~~~f~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~y~~~f~~~~p 162 (543)
T TIGR02403 83 EAKKRNIKIMLDMVFNHTSTEHEWFKKALAGDSPYRDFYIWRDPKGKPPTNWQSKFGGSAWEYFGDTGQYYLHLFDKTQA 162 (543)
T ss_pred HHHHCCCEEEEEECccccccchHHHHHhhcCCCcccCceEecCCCCCCCCcccccCCCcCccccCCCCceEEeccCCcCC
Confidence 999999999999999999999987542 2211 1110 01111100 000000000001111235799
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCc-----------------------HHHHHHHHHhcC---CceE
Q 014892 165 NIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYS-----------------------AKYVKEYIEGAR---PIFS 218 (416)
Q Consensus 165 dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~-----------------------~~~~~~~~~~~~---~~~~ 218 (416)
|||++||+|+++|++++++|+ +.||||||||+|++++ .+||+++.+.++ +.|+
T Consensus 163 dln~~np~v~~~i~~~~~~W~-~~giDGfRlDa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~l 241 (543)
T TIGR02403 163 DLNWENPEVREELKDVVNFWR-DKGVDGFRLDVINLISKDQFFEDDEIGDGRRFYTDGPRVHEYLQEMNQEVFGDNDSVT 241 (543)
T ss_pred ccCCCCHHHHHHHHHHHHHHH-HcCCCEEEEeeehhhccCcccCCCCCCCCccccCCChHHHHHHHHHHHHhhccCCeEE
Confidence 999999999999999999999 6899999999999985 468999987763 3789
Q ss_pred EEcccCCCCCCCCCCCCccchhhHhHhhhhcc-CCCcccccCchhhHHHHHHhcC--------chhhh---hhhcCCCCC
Q 014892 219 VGEYWDSCNYNSHGLDYNQDSHRQRIINWIDG-TGQLSAAFDFTTKGILQEAVKG--------QFWRL---RDAQGKPPG 286 (416)
Q Consensus 219 vgE~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~fdf~~~~~l~~~~~~--------~~~~~---~~~~~~~~~ 286 (416)
|||+|..+ .+.+..|... .+.++++|+|.. .......+ +...+ ...+...
T Consensus 242 vgE~~~~~--------------~~~~~~y~~~~~~~~d~~~nf~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-- 303 (543)
T TIGR02403 242 VGEMSSTT--------------IENCIRYSNPENKELSMVFTFHH--LKVDYPNGEKWTLAKFDFAKLKEIFSTWQTG-- 303 (543)
T ss_pred EEEeCCCC--------------HHHHHhhhCCCCCeeCeEEChhh--hhchhccccccccCCCCHHHHHHHHHHHHHh--
Confidence 99999652 2334445432 235777888752 11111111 11112 1111110
Q ss_pred ccccccCcceecccCCCCCCCCCCCCCCh----hhHHHHHHHHhcCCCeeEEecCCcCCCc-------------------
Q 014892 287 VMGWWPSRAVTFLDNHDTGSTQAHWPFPS----NHIMEGYAYILMHPGIPSVFYDHFYDWG------------------- 343 (416)
Q Consensus 287 ~~~~~p~~~~~fl~nHD~~R~~~~~~~~~----~~~~~a~a~llt~pGiP~Iy~G~E~gw~------------------- 343 (416)
........++|++|||++|+.++++... ...+++++++||+||+|+||||||+|..
T Consensus 304 -~~~~~~~~~~fl~NHD~~R~~s~~g~~~~~~~~~~k~~a~ll~tlpG~P~IYYGdEiGm~~~~~~~~~~~~D~~~~~~~ 382 (543)
T TIGR02403 304 -MQAGGGWNALFWNNHDQPRAVSRFGDDGEYRVESAKMLAAAIHLLRGTPYIYQGEEIGMTNPKFTNIEDYRDVESLNAY 382 (543)
T ss_pred -ccccCcceeeecCCCChhhHHHhcCCchhhHHHHHHHHHHHHHHCCCCeEEEeccccCCCCCCCCCHHHhcCHHHHHHH
Confidence 0001123467999999999998886432 2578888999999999999999997522
Q ss_pred ----------------------------------------------------------------hhHHHHHHHHHHHHHh
Q 014892 344 ----------------------------------------------------------------DSIHNQIVKLMDVRRQ 359 (416)
Q Consensus 344 ----------------------------------------------------------------~~l~~~~~~Li~lR~~ 359 (416)
.+++++||+||+|||+
T Consensus 383 ~~~~~~g~~~~~~~~~~~~~~rd~~RtPm~W~~~~~aGFs~~~pwl~~~~~~~~~nv~~q~~~~~Sll~~yr~Li~lRk~ 462 (543)
T TIGR02403 383 DILLKKGKSEEEALAILKQKSRDNSRTPMQWNNEKNAGFTTGKPWLGVATNYKEINVEKALADDNSIFYFYQKLIALRKS 462 (543)
T ss_pred HHHhhcCCCHHHHHHhhhccCCCCCccccccCCCCCCCCCCCCCCCCCCCCccccCHHHHhhCCccHHHHHHHHHHHHhh
Confidence 2588999999999999
Q ss_pred CcccCCCCeEEEEecC-CEEEEEE---CCEEEEEEcCCCC
Q 014892 360 QDIHSRSSIKILEAQS-NLYSAII---GDKVCMKIGDGSW 395 (416)
Q Consensus 360 ~~~l~~G~~~~~~~~~-~~~~~~R---~~~~lvvinn~~~ 395 (416)
+|+|+.|+++.+..++ ++++|.| +++++|++|.++.
T Consensus 463 ~~aL~~G~~~~~~~~~~~v~a~~R~~~~~~~lVv~N~s~~ 502 (543)
T TIGR02403 463 EPVITDGDYQFLLPDDPSVWAYTRTYKNQKLLVINNFYGE 502 (543)
T ss_pred cccccCccEEEeecCCCcEEEEEEEcCCcEEEEEEECCCC
Confidence 9999999999987764 7999988 5678889998754
|
Trehalose is a glucose disaccharide that serves in many biological systems as a compatible solute for protection against hyperosmotic and thermal stress. This family describes trehalose-6-phosphate hydrolase, product of the treC (or treA) gene, which is often found together with a trehalose uptake transporter and a trehalose operon repressor. |
| >PRK10933 trehalose-6-phosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-61 Score=496.89 Aligned_cols=366 Identities=16% Similarity=0.203 Sum_probs=260.4
Q ss_pred eeeccCceeEEEeeecCCCC-----CCcHHHHHhhhhhHHHcCCCEEEeCCCCCCCC-CCCcccccCCCCCCCCCCHHHH
Q 014892 22 AVIRNGREILFQGFNWESCK-----HDWWRNLERKVPDISKSGFTSVWLPPATHSFA-PEGYLPQNLYSLNSSYGSEHLL 95 (416)
Q Consensus 22 ~~~~~~~~~~~q~f~~~~~~-----~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~-~~GY~~~d~~~id~~~Gt~~d~ 95 (416)
|.++.. +||||+|...+.. .|||+||+++||||++||||+|||+||++++. .|||+|.||++|||+|||++||
T Consensus 5 ~~W~~~-~v~Yqi~~~~f~d~~~~~~Gdl~gi~~~ldyl~~lGv~~i~l~P~~~~~~~~~gY~~~d~~~id~~~Gt~~d~ 83 (551)
T PRK10933 5 PHWWQN-GVIYQIYPKSFQDTTGSGTGDLRGVTQRLDYLQKLGVDAIWLTPFYVSPQVDNGYDVANYTAIDPTYGTLDDF 83 (551)
T ss_pred chhhhc-CeEEEEEchHhhcCCCCCCcCHHHHHHhhHHHHhCCCCEEEECCCCCCCCCCCCCCcccCCCcCcccCCHHHH
Confidence 334544 8999999987743 48999999999999999999999999999876 6899999999999999999999
Q ss_pred HHHHHHHHHCCCEEEEEEccccCcCCCCCCCC------cccc---cCCC-----CCCCCCC---ceecCCCCCCCCCCCC
Q 014892 96 KALLHKMKQHKVRAMADIVINHRVGTTQGHGG------KYNR---YDGI-----PLSWDEH---AVTSCTGGLGNGSTGD 158 (416)
Q Consensus 96 ~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~------~~~~---f~~~-----~~~~~~~---~~~~~~~~~~~~~~~~ 158 (416)
++||++||++||+||+|+|+||++..|+|+.. .|.. +.+. +..|... ....+.+..+.....+
T Consensus 84 ~~lv~~~h~~gi~vilD~V~NH~s~~~~wf~~~~~~~~~y~d~y~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~y~~~ 163 (551)
T PRK10933 84 DELVAQAKSRGIRIILDMVFNHTSTQHAWFREALNKESPYRQFYIWRDGEPETPPNNWRSKFGGSAWRWHAESEQYYLHL 163 (551)
T ss_pred HHHHHHHHHCCCEEEEEECCCCccCchhHHHhhcCCCCCCcCceEecCCCCCCCCCcccccCCCccccccCCCCceEeec
Confidence 99999999999999999999999999988643 2211 1110 0011100 0000000000011112
Q ss_pred CCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcH-----------------------HHHHHHHHhcC-
Q 014892 159 NFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSA-----------------------KYVKEYIEGAR- 214 (416)
Q Consensus 159 ~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~-----------------------~~~~~~~~~~~- 214 (416)
+...+||||++||+||++|++++++|+ ++||||||+|+|+++.. +||+++.+.+.
T Consensus 164 f~~~~pdLn~~np~V~~~l~~~~~~W~-~~GvDGfRlDa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 242 (551)
T PRK10933 164 FAPEQADLNWENPAVRAELKKVCEFWA-DRGVDGLRLDVVNLISKDQDFPDDLDGDGRRFYTDGPRAHEFLQEMNRDVFT 242 (551)
T ss_pred ccccCCccCCCCHHHHHHHHHHHHHHH-HCCCcEEEEcchhhcCcCCCCCCCcccccccccCCChHHHHHHHHHHHHhhc
Confidence 235799999999999999999999999 79999999999998863 57888876542
Q ss_pred --CceEEEcccCCCCCCCCCCCCccchhhHhHhhhhcc-CCCcccccCchhhHHHHHHhcCc--------hh---hhhhh
Q 014892 215 --PIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDG-TGQLSAAFDFTTKGILQEAVKGQ--------FW---RLRDA 280 (416)
Q Consensus 215 --~~~~vgE~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~fdf~~~~~l~~~~~~~--------~~---~~~~~ 280 (416)
..+++||+|... .+.+..|... .+.++++|+|.. .......+. .. ++...
T Consensus 243 ~~~~~~vgE~~~~~--------------~~~~~~y~~~~~~~~~~~fnf~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (551)
T PRK10933 243 PRGLMTVGEMSSTS--------------LEHCQRYAALTGSELSMTFNFHH--LKVDYPNGEKWTLAKPDFVALKTLFRH 306 (551)
T ss_pred ccCcEEEEeecCCC--------------HHHHHHhhcccCCeeeeEecHHH--hhhhhccCCcccccccCHHHHHHHHHH
Confidence 257999998642 2344444322 234566777642 222222111 11 11111
Q ss_pred cCCCCCccccccCcceecccCCCCCCCCCCCCCChh----hHHHHHHHHhcCCCeeEEecCCcCCCc-------------
Q 014892 281 QGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFPSN----HIMEGYAYILMHPGIPSVFYDHFYDWG------------- 343 (416)
Q Consensus 281 ~~~~~~~~~~~p~~~~~fl~nHD~~R~~~~~~~~~~----~~~~a~a~llt~pGiP~Iy~G~E~gw~------------- 343 (416)
+... +. .......|++|||++|+.++++.+.. .++++++++||+||+|+||||||+|..
T Consensus 307 ~~~~---~~-~~~~~~~fl~NHD~~R~~sr~g~~~~~~~~~aklla~ll~tlpG~P~IYyGeEiGm~~~~~~~~~~~~D~ 382 (551)
T PRK10933 307 WQQG---MH-NVAWNALFWCNHDQPRIVSRFGDEGEYRVPAAKMLAMVLHGMQGTPYIYQGEEIGMTNPHFTRITDYRDV 382 (551)
T ss_pred HHHh---hc-ccCeeccccCCCCcccHHHHcCCchhHHHHHHHHHHHHHHhCCCceEEEeecccCCCCCCCCCHHHhcCH
Confidence 1110 00 01234689999999999998864322 356788899999999999999997531
Q ss_pred ----------------------------------------------------------------------hhHHHHHHHH
Q 014892 344 ----------------------------------------------------------------------DSIHNQIVKL 353 (416)
Q Consensus 344 ----------------------------------------------------------------------~~l~~~~~~L 353 (416)
.+++++||+|
T Consensus 383 ~~~~~~~~~~~~g~~~~~~~~~~~~~~Rd~~RtPMqW~~~~~~GFs~~~pwl~~~~~~~~inv~~Q~~~~~Sll~~yk~L 462 (551)
T PRK10933 383 ESLNMFAELRNDGRDADELLAILASKSRDNSRTPMQWDNGDNAGFTQGEPWIGLCDNYQEINVEAALADEDSVFYTYQKL 462 (551)
T ss_pred HHHHHHHHHhhcCCCHHHHHhhhhccCCCCCccccccCCCCCCCCCCCCCCCCCCcccccccHHHHhcCcccHHHHHHHH
Confidence 1488999999
Q ss_pred HHHHHhCcccCCCCeEEEEe-cCCEEEEEE---CCEEEEEEcCCCCC-----C-CCCCcEEeeeCC
Q 014892 354 MDVRRQQDIHSRSSIKILEA-QSNLYSAII---GDKVCMKIGDGSWC-----P-AGKEWTLATSGH 409 (416)
Q Consensus 354 i~lR~~~~~l~~G~~~~~~~-~~~~~~~~R---~~~~lvvinn~~~~-----~-~~~~~~~~ls~~ 409 (416)
|+|||++|+|..|+++.+.. ++++++|+| +++++||+|.++.. + ..+.|++++++.
T Consensus 463 i~lRk~~~aL~~G~~~~~~~~~~~v~af~R~~~~~~~lvv~N~s~~~~~~~~~~~~~~~~~~l~~~ 528 (551)
T PRK10933 463 IALRKQEPVLTWGDYQDLLPNHPSLWCYRREWQGQTLLVIANLSREPQPWQPGQMRGNWQLLMHNY 528 (551)
T ss_pred HHHhhcChhhccceeEEeccCCCcEEEEEEEcCCcEEEEEEECCCCCeeeecCcccCCceEEeecC
Confidence 99999999999999998765 457999988 67889999997532 1 123566666653
|
|
| >TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-57 Score=466.07 Aligned_cols=332 Identities=18% Similarity=0.203 Sum_probs=243.6
Q ss_pred cCceeEEEeeecCCCCCCcHHHHHhhhhhHHHcCCCEEEeCCCCCCC--CCCCcccccCCCCCCCCCCHHHHHHHHHHHH
Q 014892 26 NGREILFQGFNWESCKHDWWRNLERKVPDISKSGFTSVWLPPATHSF--APEGYLPQNLYSLNSSYGSEHLLKALLHKMK 103 (416)
Q Consensus 26 ~~~~~~~q~f~~~~~~~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~--~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH 103 (416)
..+.+||++..++++..|||+||+++|||||+||||+||||||++++ .+|||++.||++|+++|||.+|||+||++||
T Consensus 91 ~~~~viYE~hv~~f~~~G~~~gi~~~l~yl~~LGv~~i~L~Pi~~~~~~~~~GY~~~~~~~~~~~~G~~~e~k~lV~~aH 170 (542)
T TIGR02402 91 LEEAVIYELHVGTFTPEGTFDAAIEKLPYLADLGITAIELMPVAQFPGTRGWGYDGVLPYAPHNAYGGPDDLKALVDAAH 170 (542)
T ss_pred ccccEEEEEEhhhcCCCCCHHHHHHhhHHHHHcCCCEEEeCccccCCCCCCCCCCccCccccccccCCHHHHHHHHHHHH
Confidence 35689999999999999999999999999999999999999998876 4799999999999999999999999999999
Q ss_pred HCCCEEEEEEccccCcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCH---HHHHHHHHH
Q 014892 104 QHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQH---FVRKDIIAW 180 (416)
Q Consensus 104 ~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~---~v~~~l~~~ 180 (416)
++||+||||+|+||++.++.... .+. + .|... ..+ ...+++|+++| +||++|+++
T Consensus 171 ~~Gi~VilD~V~NH~~~~~~~~~----~~~--~-y~~~~----~~~-----------~wg~~~n~~~~~~~~vr~~i~~~ 228 (542)
T TIGR02402 171 GLGLGVILDVVYNHFGPEGNYLP----RYA--P-YFTDR----YST-----------PWGAAINFDGPGSDEVRRYILDN 228 (542)
T ss_pred HCCCEEEEEEccCCCCCcccccc----ccC--c-cccCC----CCC-----------CCCCccccCCCcHHHHHHHHHHH
Confidence 99999999999999987653211 111 0 01100 001 11357999999 999999999
Q ss_pred HHHHHHhcCCCeEEecccCCCc----HHHHHHHHHhcC---C----ceEEEcccCCCCCCCCCCCCccchhhHhHhhhhc
Q 014892 181 LRWLRNTVGFQDFRFDFARGYS----AKYVKEYIEGAR---P----IFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWID 249 (416)
Q Consensus 181 ~~~w~~~~gvDGfRlD~a~~~~----~~~~~~~~~~~~---~----~~~vgE~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 249 (416)
+++|++++||||||+|++.+++ .+||+++.+.++ | .+++||.|...+. . +.....
T Consensus 229 ~~~W~~e~~iDGfR~D~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~~li~E~~~~~~~------~--------~~~~~~ 294 (542)
T TIGR02402 229 ALYWLREYHFDGLRLDAVHAIADTSAKHILEELAREVHELAAELRPVHLIAESDLNDPS------L--------VTPRED 294 (542)
T ss_pred HHHHHHHhCCcEEEEeCHHHhccccHHHHHHHHHHHHHHHCCCCceEEEEEecCCCCCc------c--------cccccC
Confidence 9999999999999999998885 459988877654 3 5799998754210 0 000000
Q ss_pred cCCCcccccCchhhHHHHHHhcCch-----------hhhhhhcCCC--------------CCc-cc-cccCcceecccCC
Q 014892 250 GTGQLSAAFDFTTKGILQEAVKGQF-----------WRLRDAQGKP--------------PGV-MG-WWPSRAVTFLDNH 302 (416)
Q Consensus 250 ~~~~~~~~fdf~~~~~l~~~~~~~~-----------~~~~~~~~~~--------------~~~-~~-~~p~~~~~fl~nH 302 (416)
.+.++++.++..++..+...+.|.. ..+...+... .+. .. ..|.+.++|++||
T Consensus 295 ~~~~~d~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~l~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~vnfl~nH 374 (542)
T TIGR02402 295 GGYGLDAQWNDDFHHALHVLLTGERQGYYADFGDPLAALAKTLRDGFVYDGEYSPFRGRPHGRPSGDLPPHRFVVFIQNH 374 (542)
T ss_pred CccceEEEECchHHHHHHHHhcCCcceeecccCcCHHHHHHHHHHhcccCccccccccccCCCCCCCCCHHHEEEEccCc
Confidence 0112344555555555555543210 1111111000 000 00 1244779999999
Q ss_pred CC-------CCCCCCCCCChhhHHHHHHHHhcCCCeeEEecCCcCC----------------------------------
Q 014892 303 DT-------GSTQAHWPFPSNHIMEGYAYILMHPGIPSVFYDHFYD---------------------------------- 341 (416)
Q Consensus 303 D~-------~R~~~~~~~~~~~~~~a~a~llt~pGiP~Iy~G~E~g---------------------------------- 341 (416)
|+ .|+...+. .++.++|++++||+||+||||||||+|
T Consensus 375 D~~gn~~~~~Rl~~~~~--~~~~~la~alllt~pGiP~Iy~GqE~g~~~~~~ff~d~~~~~l~~~v~~gr~~e~~~~~~~ 452 (542)
T TIGR02402 375 DQIGNRALGERLSQLLS--PGSLKLAAALLLLSPYTPLLFMGEEYGATTPFQFFTDHPDPELAQAVREGRKKEFARFGWD 452 (542)
T ss_pred ccccccchhhhhhhcCC--HHHHHHHHHHHHHcCCCceeeccHhhcCCCCCccccCCCCHHHHHHHHHhHHHHHHhcccc
Confidence 97 57766553 468999999999999999999999964
Q ss_pred -------------------Cc-------hhHHHHHHHHHHHHHhCcccCCCCeEEEEe----cCCEEEEEE-CCEEEEEE
Q 014892 342 -------------------WG-------DSIHNQIVKLMDVRRQQDIHSRSSIKILEA----QSNLYSAII-GDKVCMKI 390 (416)
Q Consensus 342 -------------------w~-------~~l~~~~~~Li~lR~~~~~l~~G~~~~~~~----~~~~~~~~R-~~~~lvvi 390 (416)
|+ .+++++||+||+|||++++|+.++...+.. ++.+++++. +++++|++
T Consensus 453 ~~~~pdp~~~~~~~~~~~~W~~~~~~~~~~~~~~yr~Li~lRk~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 532 (542)
T TIGR02402 453 PEDVPDPQDEETFLRSKLDWAEAESGEHARWLAFYRDLLALRRELPVLLLPGARALEVVVDEDPGWVAVRFGRGELVLAA 532 (542)
T ss_pred cccCCCCCchhhHhhccCCcccccccchHHHHHHHHHHHHHhccCccccCCCcccceeeecCCCCEEEEEECCCeEEEEE
Confidence 21 258899999999999999999887655433 446777766 66889999
Q ss_pred cCCCC
Q 014892 391 GDGSW 395 (416)
Q Consensus 391 nn~~~ 395 (416)
|.++.
T Consensus 533 N~~~~ 537 (542)
T TIGR02402 533 NLSTS 537 (542)
T ss_pred eCCCC
Confidence 98654
|
Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system. |
| >TIGR02104 pulA_typeI pullulanase, type I | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-56 Score=466.52 Aligned_cols=363 Identities=18% Similarity=0.226 Sum_probs=254.6
Q ss_pred ccCceeEEEeeecCCCC--------CCcHHHHHhh-----------hhhHHHcCCCEEEeCCCCCCCC----------CC
Q 014892 25 RNGREILFQGFNWESCK--------HDWWRNLERK-----------VPDISKSGFTSVWLPPATHSFA----------PE 75 (416)
Q Consensus 25 ~~~~~~~~q~f~~~~~~--------~G~~~gi~~~-----------LdyLk~LGv~~I~L~Pi~~~~~----------~~ 75 (416)
...+.+||++..++++. .|+|.|++++ |||||+||||+||||||+++++ +|
T Consensus 124 ~~~~~vIYElhv~~ft~~~~~~~~~~G~f~~~~e~~~~~~~g~~~~LdyL~~LGvt~I~L~Pi~~~~~~~~~~~~~~~~w 203 (605)
T TIGR02104 124 NPEDAIIYELHIRDFSIHENSGVKNKGKYLGLTETGTKGPNGVSTGLDYLKELGVTHVQLLPVFDFAGVDEEDPNNAYNW 203 (605)
T ss_pred ChhHcEEEEEecchhccCCCCCcCCCCceeeeeccCccccccchhHHHHHHHcCCCEEEeCCcccccccccccCCCCCCC
Confidence 34457999999998763 4777777665 9999999999999999998764 49
Q ss_pred CcccccCCCCCCCCCC--------HHHHHHHHHHHHHCCCEEEEEEccccCcCCCCCCCCcccccCCCCCCCCCCceec-
Q 014892 76 GYLPQNLYSLNSSYGS--------EHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTS- 146 (416)
Q Consensus 76 GY~~~d~~~id~~~Gt--------~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~~~~~~~~~~~~~- 146 (416)
||++.||++++++||+ .+|||+||++||++||+||||+|+||++.... + +|.+....|. +.
T Consensus 204 GY~~~~y~~~~~~y~~~p~~~~~~~~efk~lV~~~H~~Gi~VilDvV~NH~~~~~~---~---~f~~~~~~~~----~~~ 273 (605)
T TIGR02104 204 GYDPLNYNVPEGSYSTNPYDPATRIRELKQMIQALHENGIRVIMDVVYNHTYSREE---S---PFEKTVPGYY----YRY 273 (605)
T ss_pred CCCCccCCCcChhhhcCCCccchHHHHHHHHHHHHHHCCCEEEEEEEcCCccCCCC---C---cccCCCCCee----EEE
Confidence 9999999999999987 58999999999999999999999999985311 1 1221000110 00
Q ss_pred CCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcHHHHHHHHHhcC---C-ceEEEcc
Q 014892 147 CTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGAR---P-IFSVGEY 222 (416)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~~~~~~~~~~~~---~-~~~vgE~ 222 (416)
...+......+| ..++|+++|+||++|++++++|++++||||||+|++++++.+||+++.++++ | .+++||.
T Consensus 274 ~~~g~~~~~~g~----~~~~~~~~~~v~~~i~~~~~~W~~e~~iDGfR~D~~~~~~~~~~~~~~~~~~~~~p~~~ligE~ 349 (605)
T TIGR02104 274 NEDGTLSNGTGV----GNDTASEREMMRKFIVDSVLYWVKEYNIDGFRFDLMGIHDIETMNEIRKALNKIDPNILLYGEG 349 (605)
T ss_pred CCCCCccCCCcc----cCCcccCCHHHHHHHHHHHHHHHHHcCCCEEEEechhcCCHHHHHHHHHHHHhhCCCeEEEEcc
Confidence 001111111112 3589999999999999999999999999999999999999999999988765 3 6899999
Q ss_pred cCCCCCCCCCCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHh---------cCc---hhhhhhhcCCCCC----
Q 014892 223 WDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAV---------KGQ---FWRLRDAQGKPPG---- 286 (416)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~---------~~~---~~~~~~~~~~~~~---- 286 (416)
|+..+. ...+ ........ ... ...+.|++.++..++... .|. ...+...+.....
T Consensus 350 w~~~~~------~~~~-~~~~~~~~-~~~-~~~~~~n~~~rd~i~~~~~~~~~~~f~~g~~~~~~~l~~~l~~~~~~~~~ 420 (605)
T TIGR02104 350 WDLGTP------LPPE-QKATKANA-YQM-PGIAFFNDEFRDALKGSVFHLKKKGFVSGNPGTEETVKKGILGSIELDAV 420 (605)
T ss_pred CCCCCC------cchh-hhhhhhcc-CCC-CceEEECCcchhhhcCCccccccCceecCCCCcHHHHHhheeCChhhccc
Confidence 976310 0000 00000000 000 124567888877776321 122 1223322221100
Q ss_pred -ccccccCcceecccCCCCCCCCCCCC----C-----ChhhHHHHHHHHhcCCCeeEEecCCcCC---------------
Q 014892 287 -VMGWWPSRAVTFLDNHDTGSTQAHWP----F-----PSNHIMEGYAYILMHPGIPSVFYDHFYD--------------- 341 (416)
Q Consensus 287 -~~~~~p~~~~~fl~nHD~~R~~~~~~----~-----~~~~~~~a~a~llt~pGiP~Iy~G~E~g--------------- 341 (416)
.....|..++||++|||+.|+...+. . ..++.++|++++||+||+||||||||++
T Consensus 421 ~~~~~~p~~~vnyl~~HD~~~l~d~l~~~~~~~~~~~~~~r~rla~alllts~GiP~iy~GdE~g~s~~g~~n~y~~~d~ 500 (605)
T TIGR02104 421 KPSALDPSQSINYVECHDNHTLWDKLSLANPDETEEQLKKRQKLATAILLLSQGIPFLHAGQEFMRTKQGDENSYNSPDS 500 (605)
T ss_pred ccccCChhheEEEEEecCCCCHHHHHHhhCCCCCHHHHHHHHHHHHHHHHHcCCCceeecchhhhccCCCCCCCccCCCc
Confidence 01224668899999999998743321 1 1357899999999999999999999974
Q ss_pred -----Cc-----hhHHHHHHHHHHHHHhCcccCCCCeEE-------EEe-cCCEEEEEE-C-------CEEEEEEcCCCC
Q 014892 342 -----WG-----DSIHNQIVKLMDVRRQQDIHSRSSIKI-------LEA-QSNLYSAII-G-------DKVCMKIGDGSW 395 (416)
Q Consensus 342 -----w~-----~~l~~~~~~Li~lR~~~~~l~~G~~~~-------~~~-~~~~~~~~R-~-------~~~lvvinn~~~ 395 (416)
|+ .++++++|+||+|||++|+|+.|++.. +.. ++.+++|+| + ++++|++|.++.
T Consensus 501 ~~~ldW~~~~~~~~~~~~~~~Li~lRk~~pal~~~~~~~i~~~~~~~~~~~~~vla~~r~~~~~~~~~~~llVv~N~s~~ 580 (605)
T TIGR02104 501 INQLDWDRKATFKDDVNYIKGLIALRKAHPAFRLSSAEDIRKHLEFLPAEPSGVIAYRLKDHANGDPWKDIIVIHNANPE 580 (605)
T ss_pred ccccCccccccchHHHHHHHHHHHHHhhCccccCCChhhhcceeEEccCCCCcEEEEEEeCCcCCCCcCeEEEEEeCCCC
Confidence 32 368999999999999999999987632 222 457999988 2 268899998653
Q ss_pred C-----CCCCCcEEeeeCCc
Q 014892 396 C-----PAGKEWTLATSGHK 410 (416)
Q Consensus 396 ~-----~~~~~~~~~ls~~~ 410 (416)
. |..+.|+++++++.
T Consensus 581 ~~~v~lp~~~~w~~~~~~~~ 600 (605)
T TIGR02104 581 PVDIQLPSDGTWNVVVDNKN 600 (605)
T ss_pred CeEEECCCCCCEEEEECCCc
Confidence 2 33468999887753
|
Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family consists of pullulanases related to the subfamilies described in TIGR02102 and TIGR02103 but having a different domain architecture with shorter sequences. Members are called type I pullulanases. |
| >PRK12313 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-55 Score=459.92 Aligned_cols=353 Identities=15% Similarity=0.187 Sum_probs=246.4
Q ss_pred CceeEEEeeecCCCCC-----CcHHHHHhhh-hhHHHcCCCEEEeCCCCCCC--CCCCcccccCCCCCCCCCCHHHHHHH
Q 014892 27 GREILFQGFNWESCKH-----DWWRNLERKV-PDISKSGFTSVWLPPATHSF--APEGYLPQNLYSLNSSYGSEHLLKAL 98 (416)
Q Consensus 27 ~~~~~~q~f~~~~~~~-----G~~~gi~~~L-dyLk~LGv~~I~L~Pi~~~~--~~~GY~~~d~~~id~~~Gt~~d~~~L 98 (416)
...+||++..+.++.+ |+|+||+++| ||||+||||+||||||++++ .+|||++.|||+|+|+|||++|||+|
T Consensus 146 ~~~~iYe~hv~~f~~~~~~~~g~~~~~~~~ll~yl~~LGv~~i~L~Pi~~~~~~~~~GY~~~~y~~i~~~~Gt~~d~k~l 225 (633)
T PRK12313 146 RPISIYEVHLGSWKRNEDGRPLSYRELADELIPYVKEMGYTHVEFMPLMEHPLDGSWGYQLTGYFAPTSRYGTPEDFMYL 225 (633)
T ss_pred CCceEEEEehhccccCCCCCccCHHHHHHHHHHHHHHcCCCEEEeCchhcCCCCCCCCCCCcCcCcCCCCCCCHHHHHHH
Confidence 3368999999877543 7999999995 99999999999999999987 57999999999999999999999999
Q ss_pred HHHHHHCCCEEEEEEccccCcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHH
Q 014892 99 LHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDII 178 (416)
Q Consensus 99 v~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~ 178 (416)
|++||++||+||||+|+||++.++.+. ..|.+.+ .+.+.++... ... ..+.+++|++||+||++|+
T Consensus 226 v~~~H~~Gi~VilD~V~nH~~~~~~~~----~~~~~~~-------~~~~~~~~~~--~~~-~w~~~~~n~~~~~vr~~l~ 291 (633)
T PRK12313 226 VDALHQNGIGVILDWVPGHFPKDDDGL----AYFDGTP-------LYEYQDPRRA--ENP-DWGALNFDLGKNEVRSFLI 291 (633)
T ss_pred HHHHHHCCCEEEEEECCCCCCCCcccc----cccCCCc-------ceeecCCCCC--cCC-CCCCcccCCCCHHHHHHHH
Confidence 999999999999999999999865421 1122110 0111111000 000 1234689999999999999
Q ss_pred HHHHHHHHhcCCCeEEecccCCC-----------------------cHHHHHHHHHhcC---C-ceEEEcccCCCCCCCC
Q 014892 179 AWLRWLRNTVGFQDFRFDFARGY-----------------------SAKYVKEYIEGAR---P-IFSVGEYWDSCNYNSH 231 (416)
Q Consensus 179 ~~~~~w~~~~gvDGfRlD~a~~~-----------------------~~~~~~~~~~~~~---~-~~~vgE~~~~~~~~~~ 231 (416)
+++++|++++||||||+|+|.++ ..+||+++.+.++ | .++|||.+...+
T Consensus 292 ~~~~~W~~~~~iDG~R~D~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~v~~~~p~~~liaE~~~~~~---- 367 (633)
T PRK12313 292 SSALFWLDEYHLDGLRVDAVSNMLYLDYDEEGEWTPNKYGGRENLEAIYFLQKLNEVVYLEHPDVLMIAEESTAWP---- 367 (633)
T ss_pred HHHHHHHHHhCCcEEEEcChhhhhhcccccccCcCCcccCCCCCcHHHHHHHHHHHHHHHHCCCeEEEEECCCCCc----
Confidence 99999999999999999988644 2579999987764 4 789999765321
Q ss_pred CCCCccchhhHhHhh-hhccCCCcccccCchhhHHHHHHhcCc-hhhhhhhcCCC-CCccccccCcceecccCCCCC---
Q 014892 232 GLDYNQDSHRQRIIN-WIDGTGQLSAAFDFTTKGILQEAVKGQ-FWRLRDAQGKP-PGVMGWWPSRAVTFLDNHDTG--- 305 (416)
Q Consensus 232 ~~~~~~~~~~~~l~~-~~~~~~~~~~~fdf~~~~~l~~~~~~~-~~~~~~~~~~~-~~~~~~~p~~~~~fl~nHD~~--- 305 (416)
.+.. ....+-+++..++..+...+...+..+ ..+-.. ..+. ..+..... ...++++|||+.
T Consensus 368 -----------~~~~~~~~gg~gfd~~w~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-e~~~l~~sHD~~~~g 434 (633)
T PRK12313 368 -----------KVTGPVEVGGLGFDYKWNMGWMNDTLRYFEEDPIYRKYH-HNLLTFSFMYAFS-ENFVLPFSHDEVVHG 434 (633)
T ss_pred -----------cccccccCCCCCcCceeCcHHHHHHHHHhhhCccccccc-cccchHHHhhhhh-cccccCCCCcccccC
Confidence 0100 001111344555555555445444221 100000 0000 00000001 123567899994
Q ss_pred --CCCCCCCCCh----hhHHHHHHHHhcCCCeeEEecCCcCC------------Cc-------hhHHHHHHHHHHHHHhC
Q 014892 306 --STQAHWPFPS----NHIMEGYAYILMHPGIPSVFYDHFYD------------WG-------DSIHNQIVKLMDVRRQQ 360 (416)
Q Consensus 306 --R~~~~~~~~~----~~~~~a~a~llt~pGiP~Iy~G~E~g------------w~-------~~l~~~~~~Li~lR~~~ 360 (416)
|+...+..+. .+++++++++||+||+||||||+|+| |+ .++.+++|+||+||+++
T Consensus 435 ~~~~~~~~~g~~~~~~~~~r~~~~~~~t~pG~Plif~G~E~g~~~~~~~~~~l~W~~~~~~~~~~l~~~~r~Li~LRr~~ 514 (633)
T PRK12313 435 KKSLMHKMPGDRWQQFANLRLLYTYMITHPGKKLLFMGSEFGQFLEWKHDESLEWHLLEDPMNAGMQRFTSDLNQLYKDE 514 (633)
T ss_pred CccHHHhcCCCHHHHHHHHHHHHHHHHhCCCCcEeecccccccCccCCccCCCCccccCChhHHHHHHHHHHHHHHHHhC
Confidence 5555554333 56899999999999999999999986 42 37999999999999999
Q ss_pred cccCCC-----CeEEEEec---CCEEEEEE-C----CEEEEEEcCCCC--------CCCCCCcEEeeeCCc
Q 014892 361 DIHSRS-----SIKILEAQ---SNLYSAII-G----DKVCMKIGDGSW--------CPAGKEWTLATSGHK 410 (416)
Q Consensus 361 ~~l~~G-----~~~~~~~~---~~~~~~~R-~----~~~lvvinn~~~--------~~~~~~~~~~ls~~~ 410 (416)
|+|+.| .++.+..+ +++++|.| . +.++||+|.++. .|.++.|+.+++...
T Consensus 515 paL~~~d~~~~~~~~l~~~~~~~~vlaf~R~~~~~~~~llvv~N~s~~~~~~y~i~~p~~g~~~~ilnsd~ 585 (633)
T PRK12313 515 PALWELDFSPDGFEWIDADDADQSVLSFIRKGKNKGDFLVVVFNFTPVEREDYRIGVPVAGIYEEILNTDS 585 (633)
T ss_pred hHhhcccCCCCCcEEEECcCCCCCEEEEEEeCCCCCceEEEEEeCCCCcccceeECCCCCCeEEEEEcCCc
Confidence 999854 46666543 36999988 2 468888998652 244578999887554
|
|
| >TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-55 Score=454.34 Aligned_cols=352 Identities=14% Similarity=0.156 Sum_probs=247.3
Q ss_pred eeEEEeeecCCCCCCcHHHHHhhh-hhHHHcCCCEEEeCCCCCCC--CCCCcccccCCCCCCCCCCHHHHHHHHHHHHHC
Q 014892 29 EILFQGFNWESCKHDWWRNLERKV-PDISKSGFTSVWLPPATHSF--APEGYLPQNLYSLNSSYGSEHLLKALLHKMKQH 105 (416)
Q Consensus 29 ~~~~q~f~~~~~~~G~~~gi~~~L-dyLk~LGv~~I~L~Pi~~~~--~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~ 105 (416)
.+||++-.++++.+|+|+||+++| ||||+||||+||||||++++ .+|||+++|||+|+++|||++|||+||++||++
T Consensus 139 ~~iYe~hv~~~~~~g~~~~i~~~l~dyl~~LGvt~i~L~Pi~e~~~~~~wGY~~~~y~~~~~~~Gt~~dlk~lV~~~H~~ 218 (613)
T TIGR01515 139 VSIYELHLGSWRHGLSYRELADQLIPYVKELGFTHIELLPVAEHPFDGSWGYQVTGYYAPTSRFGTPDDFMYFVDACHQA 218 (613)
T ss_pred ceEEEEehhhccCCCCHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCCCCcccCcccccccCCHHHHHHHHHHHHHC
Confidence 579999999998899999999997 99999999999999999986 479999999999999999999999999999999
Q ss_pred CCEEEEEEccccCcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHH
Q 014892 106 KVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLR 185 (416)
Q Consensus 106 Gi~VilD~V~NH~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~ 185 (416)
||+||||+|+||++.++... ..|.+.+. |. +.+... ......+.+++|+++|+||++|++++++|+
T Consensus 219 Gi~VilD~V~NH~~~~~~~~----~~~~~~~~-y~------~~~~~~---~~~~~w~~~~~~~~~~~Vr~~l~~~~~~W~ 284 (613)
T TIGR01515 219 GIGVILDWVPGHFPKDDHGL----AEFDGTPL-YE------HKDPRD---GEHWDWGTLIFDYGRPEVRNFLVANALYWA 284 (613)
T ss_pred CCEEEEEecccCcCCccchh----hccCCCcc-ee------ccCCcc---CcCCCCCCceecCCCHHHHHHHHHHHHHHH
Confidence 99999999999999865421 11221110 10 011000 000112467899999999999999999999
Q ss_pred HhcCCCeEEecccCCC------------------------cHHHHHHHHHhcC---C-ceEEEcccCCCCCCCCCCCCcc
Q 014892 186 NTVGFQDFRFDFARGY------------------------SAKYVKEYIEGAR---P-IFSVGEYWDSCNYNSHGLDYNQ 237 (416)
Q Consensus 186 ~~~gvDGfRlD~a~~~------------------------~~~~~~~~~~~~~---~-~~~vgE~~~~~~~~~~~~~~~~ 237 (416)
++|||||||+|+++++ ..+||+++.+.++ | .++|||.+...+
T Consensus 285 ~ey~iDG~R~D~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~v~~~~p~~~liaE~~~~~~---------- 354 (613)
T TIGR01515 285 EFYHIDGLRVDAVASMLYLDYSRDEGEWSPNEDGGRENLEAVDFLRKLNQTVYEAFPGVVTIAEESTEWP---------- 354 (613)
T ss_pred HHhCCcEEEEcCHHHhhhhccccccccccccccCCcCChHHHHHHHHHHHHHHHHCCCeEEEEEeCCCCc----------
Confidence 9999999999997544 2579999988765 4 789999764311
Q ss_pred chhhHhHhhhhccCCCcccccCchhhHHHHHHhcCc-hhhhhhhcCCCCCccccccCcceecccCCCC-----CCCCCCC
Q 014892 238 DSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKGQ-FWRLRDAQGKPPGVMGWWPSRAVTFLDNHDT-----GSTQAHW 311 (416)
Q Consensus 238 ~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~fl~nHD~-----~R~~~~~ 311 (416)
........++-+++..+++.++..+...+..+ ..+.......... +...-.....+++|||+ +|+...+
T Consensus 355 ----~~~~~~~~gg~gfd~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~sHD~~~~g~~~i~~~~ 429 (613)
T TIGR01515 355 ----GVTRPTDEGGLGFHYKWNMGWMHDTLDYMSTDPVERQYHHQLITFS-MLYAFSENFVLPLSHDEVVHGKKSLLNKM 429 (613)
T ss_pred ----cccccccCCcCCcCeeeCchHHHHHHHHHhhChhhHhhccccccHH-HHHHhhhccccCCCCCCcccCcccHHHhC
Confidence 00011111122455666666655555554221 1111100000000 00000112346789999 3444444
Q ss_pred CCC----hhhHHHHHHHHhcCCCeeEEecCCcCC------------Cc-------hhHHHHHHHHHHHHHhCcccCCCCe
Q 014892 312 PFP----SNHIMEGYAYILMHPGIPSVFYDHFYD------------WG-------DSIHNQIVKLMDVRRQQDIHSRSSI 368 (416)
Q Consensus 312 ~~~----~~~~~~a~a~llt~pGiP~Iy~G~E~g------------w~-------~~l~~~~~~Li~lR~~~~~l~~G~~ 368 (416)
..+ ..+++++++++||+||+||||||+|+| |+ .++.+++|+|++||+++|+|+.|++
T Consensus 430 ~g~~~~~~~~~r~~~~~~~t~pG~plif~G~E~g~~~~~~~~~~l~W~~~~~~~~~~l~~~~k~L~~Lr~~~paL~~~~~ 509 (613)
T TIGR01515 430 PGDYWQKFANYRALLGYMWAHPGKKLLFMGSEFAQGSEWNDTEQLDWHLLSFPMHQGVSVFVRDLNRTYQKSKALYEHDF 509 (613)
T ss_pred CCchHHHHHHHHHHHHHHHhCCCCCEEEcchhcCcCCCCCCCccCCCccccCcccHHHHHHHHHHHHHHhhCHHhhccCC
Confidence 332 247899999999999999999999985 32 3689999999999999999986644
Q ss_pred -----EEEEe---cCCEEEEEE-C----CEEEEEEcCCCCC--------CCCCCcEEeeeCC
Q 014892 369 -----KILEA---QSNLYSAII-G----DKVCMKIGDGSWC--------PAGKEWTLATSGH 409 (416)
Q Consensus 369 -----~~~~~---~~~~~~~~R-~----~~~lvvinn~~~~--------~~~~~~~~~ls~~ 409 (416)
+.+.. ++++++|.| . ++++||+|.+... |.+|.|+.+|+..
T Consensus 510 ~~~~~~~~~~~~~~~~vlaf~R~~~~~~~~~~vv~N~~~~~~~~Y~i~~p~~g~~~~il~Sd 571 (613)
T TIGR01515 510 DPQGFEWIDVDDDEQSVFSFIRRAKKHGEALVIICNFTPVVRHQYRVGVPQPGQYREVLNSD 571 (613)
T ss_pred CCCceEEEEcccCCCCEEEEEEecCCCCCeEEEEEeCCCCCccceEeCCCCCCeEEEEEeCC
Confidence 33543 346999988 2 3688999996542 3357888888644
|
A sequence from Arabidopsis thaliana, GP|9294564, scores just above trusted, but appears either to contain corrupt sequence or, more likely, to be a pseudogene as some of the conserved catalytic residues common to the alpha amylase family are not conserved here. |
| >TIGR02100 glgX_debranch glycogen debranching enzyme GlgX | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-53 Score=446.18 Aligned_cols=362 Identities=16% Similarity=0.237 Sum_probs=254.4
Q ss_pred eeeccCceeEEEeeecCCCC---------CCcHHHHHhh--hhhHHHcCCCEEEeCCCCCCC-----------CCCCccc
Q 014892 22 AVIRNGREILFQGFNWESCK---------HDWWRNLERK--VPDISKSGFTSVWLPPATHSF-----------APEGYLP 79 (416)
Q Consensus 22 ~~~~~~~~~~~q~f~~~~~~---------~G~~~gi~~~--LdyLk~LGv~~I~L~Pi~~~~-----------~~~GY~~ 79 (416)
|.....+.|||++..++++. .|+|+||+++ |||||+||||+||||||+++. ++|||+|
T Consensus 149 p~~~~~d~iIYE~hvr~Ft~~~~~~~~~~~Gtf~Gi~~~~~LdyLk~LGvtaI~L~Pi~~~~~~~~~~~~~~~~ywGYd~ 228 (688)
T TIGR02100 149 PRTPWEDTIIYEAHVKGFTQLHPDIPEELRGTYAGLAHPAMIDYLKKLGVTAVELLPVHAFIDDRHLLEKGLRNYWGYNT 228 (688)
T ss_pred CCCCccccEEEEEEhHHhcCCCCCCCcccccCHHHHhccchhHHHHHcCCCEEEECCcccCCccccccccCCCCccCcCc
Confidence 33344678999999998764 3899999996 999999999999999999874 3699999
Q ss_pred ccCCCCCCCC---CCHHHHHHHHHHHHHCCCEEEEEEccccCcCCCCCCC-CcccccCCCCCCCCCCceecCC-CCCCCC
Q 014892 80 QNLYSLNSSY---GSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHG-GKYNRYDGIPLSWDEHAVTSCT-GGLGNG 154 (416)
Q Consensus 80 ~d~~~id~~~---Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~-~~~~~f~~~~~~~~~~~~~~~~-~~~~~~ 154 (416)
.|||+|+|+| |+.+|||+||++||++||+||||+|+||++..+.... ..+..+.. ..|... ... .+....
T Consensus 229 ~~y~a~d~~y~~~g~~~efk~LV~~~H~~GI~VIlDvV~NHt~~~~~~~~~~~~~~~d~--~~yy~~---~~~~~~~~~~ 303 (688)
T TIGR02100 229 LGFFAPEPRYLASGQVAEFKTMVRALHDAGIEVILDVVYNHTAEGNELGPTLSFRGIDN--ASYYRL---QPDDKRYYIN 303 (688)
T ss_pred ccccccChhhcCCCCHHHHHHHHHHHHHCCCEEEEEECcCCccCcCCCCCcccccCCCC--CcceEe---cCCCCceecC
Confidence 9999999999 6789999999999999999999999999998654211 11111110 011100 000 011111
Q ss_pred CCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCc---------HHHHHHHHHh-cCC-ceEEEccc
Q 014892 155 STGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYS---------AKYVKEYIEG-ARP-IFSVGEYW 223 (416)
Q Consensus 155 ~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~---------~~~~~~~~~~-~~~-~~~vgE~~ 223 (416)
.....+++|+++|+||++|++++++|++++||||||+|+|..++ ..+++++.+. +.+ .+++||.|
T Consensus 304 ----~~g~gn~ln~~~p~vr~~i~d~l~~W~~e~gIDGfR~D~a~~l~~~~~~~~~~~~~~~~i~~d~~~~~~~ligE~W 379 (688)
T TIGR02100 304 ----DTGTGNTLNLSHPRVLQMVMDSLRYWVTEMHVDGFRFDLATTLGRELYGFDMLSGFFTAIRQDPVLAQVKLIAEPW 379 (688)
T ss_pred ----CCCccccccCCCHHHHHHHHHHHHHHHHHcCCcEEEEechhhhccccCCCcccHHHHHHHHhCcccCCeEEEEeee
Confidence 12335789999999999999999999999999999999998875 3678887764 333 68999999
Q ss_pred CCCCCCCCCCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHhcCc---hhhhhhhcCCCCCccc---cccCccee
Q 014892 224 DSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKGQ---FWRLRDAQGKPPGVMG---WWPSRAVT 297 (416)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~---~~p~~~~~ 297 (416)
+...- .+. +..+ ....+.|+..++..++.++.|+ ..++...+.....++. ..|..++|
T Consensus 380 ~~~~~-----~~~-------~~~~----~~~~~~~Nd~frd~ir~f~~g~~~~~~~~~~~l~gs~~~~~~~~~~~~~~iN 443 (688)
T TIGR02100 380 DIGPG-----GYQ-------VGNF----PPGWAEWNDRYRDDMRRFWRGDAGMIGELANRLTGSSDLFEHNGRRPWASIN 443 (688)
T ss_pred cCCCC-----ccc-------ccCC----CCceEEecHHHHHHHHHHHcCCCCcHHHHHHHHhCCHhhccccCCCcCEEEE
Confidence 75310 000 0000 0123567778888888877554 3344444433222221 24568899
Q ss_pred cccCCCCCCCCCC---------CC-C----------------------------ChhhHHHHHHHHhcCCCeeEEecCCc
Q 014892 298 FLDNHDTGSTQAH---------WP-F----------------------------PSNHIMEGYAYILMHPGIPSVFYDHF 339 (416)
Q Consensus 298 fl~nHD~~R~~~~---------~~-~----------------------------~~~~~~~a~a~llt~pGiP~Iy~G~E 339 (416)
||++||+.++... .+ . ..++++++++++||+||+||||||||
T Consensus 444 yv~~HD~~tl~D~~~~~~khn~~nge~n~dg~~~N~S~n~g~eG~~~~~~~~~~r~~~~r~~~a~l~~s~GiP~i~~GdE 523 (688)
T TIGR02100 444 FVTAHDGFTLRDLVSYNEKHNEANGENNRDGHNDNYSWNCGVEGPTDDPAINALRRRQQRNLLATLLLSQGTPMLLAGDE 523 (688)
T ss_pred EEeCCCCchHHHHHHhhccchhhccccccccccccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCCCceeeecHh
Confidence 9999999763221 00 0 02468999999999999999999999
Q ss_pred CC--------------------Cc-----hhHHHHHHHHHHHHHhCcccCCCCeE-------------EEEe--------
Q 014892 340 YD--------------------WG-----DSIHNQIVKLMDVRRQQDIHSRSSIK-------------ILEA-------- 373 (416)
Q Consensus 340 ~g--------------------w~-----~~l~~~~~~Li~lR~~~~~l~~G~~~-------------~~~~-------- 373 (416)
++ |+ .++++++|+||+|||+||+|+.+++. .+..
T Consensus 524 ~g~t~~G~~n~y~~~~~~~~~dW~~~~~~~~l~~~~k~Li~lRk~~~~l~~~~~~~~~~~~~~~~~v~~~~~~G~~~~~~ 603 (688)
T TIGR02100 524 FGRTQQGNNNAYCQDNEIGWVDWSLDEGDDELLAFTKKLIALRKAHPVLRRERFFDGRNEADGLKDVTWLNADGEPMTEE 603 (688)
T ss_pred hccCCCCCCCCccCCCcccccCcccccccHHHHHHHHHHHHHHHhCchhcccccccCCcccCCCCceEEeCCCCCcCChh
Confidence 74 43 47999999999999999999987543 2211
Q ss_pred -----cCCEEEEEE-C----------CEEEEEEcCCCCC-----CCC-CCcEEeeeC
Q 014892 374 -----QSNLYSAII-G----------DKVCMKIGDGSWC-----PAG-KEWTLATSG 408 (416)
Q Consensus 374 -----~~~~~~~~R-~----------~~~lvvinn~~~~-----~~~-~~~~~~ls~ 408 (416)
...+++|.. + +.++|++|..... |.. ..|+.+++.
T Consensus 604 ~w~~~~~~~l~~~l~~~~~~~~~~~~~~~~v~~N~~~~~~~~~lP~~~~~w~~~~dt 660 (688)
T TIGR02100 604 DWENPETRLLCMVLSDMDPGGDPGADDSLLLLLNAGPEPVPFKLPGGGGRWELVLDT 660 (688)
T ss_pred hcCCCCCCEEEEEEeCCccCCCCCCCCeEEEEECCCCCCeEEECCCCCCcEEEEecC
Confidence 136788865 1 2478888875432 322 378888765
|
This family consists of the GlgX protein from the E. coli glycogen operon and probable equivalogs from other prokaryotic species. GlgX is not required for glycogen biosynthesis, but instead acts as a debranching enzyme for glycogen catabolism. This model distinguishes GlgX from pullanases and other related proteins that also operate on alpha-1,6-glycosidic linkages. In the wide band between the trusted and noise cutoffs are functionally similar enzymes, mostly from plants, that act similarly but usually are termed isoamylase. |
| >PRK05402 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-53 Score=452.71 Aligned_cols=355 Identities=15% Similarity=0.211 Sum_probs=241.7
Q ss_pred CceeEEEeeecCCCCC------CcHHHHHhhh-hhHHHcCCCEEEeCCCCCCC--CCCCcccccCCCCCCCCCCHHHHHH
Q 014892 27 GREILFQGFNWESCKH------DWWRNLERKV-PDISKSGFTSVWLPPATHSF--APEGYLPQNLYSLNSSYGSEHLLKA 97 (416)
Q Consensus 27 ~~~~~~q~f~~~~~~~------G~~~gi~~~L-dyLk~LGv~~I~L~Pi~~~~--~~~GY~~~d~~~id~~~Gt~~d~~~ 97 (416)
.+.+||++..+.++.+ |+|+||+++| ||||+||||+||||||++++ .+|||++.||++|+|+|||++|||+
T Consensus 240 ~~~~iYe~hv~~f~~~~~~~~~g~~~~i~~~l~~ylk~LGv~~i~L~Pi~e~~~~~~~GY~~~~y~ai~~~~Gt~~dfk~ 319 (726)
T PRK05402 240 APISIYEVHLGSWRRHEDGGRFLSYRELADQLIPYVKEMGFTHVELLPIAEHPFDGSWGYQPTGYYAPTSRFGTPDDFRY 319 (726)
T ss_pred CCcEEEEEehhhhccCCCCCcccCHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCCCCcccCCCcCcccCCHHHHHH
Confidence 4468999999877643 7999999996 99999999999999999876 4799999999999999999999999
Q ss_pred HHHHHHHCCCEEEEEEccccCcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHH
Q 014892 98 LLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDI 177 (416)
Q Consensus 98 Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l 177 (416)
||++||++||+||||+|+||++.++.+. ..|.+.+. | .+.+... .....+ +..++|+++|+||++|
T Consensus 320 lV~~~H~~Gi~VilD~V~NH~~~~~~~~----~~~~~~~~-y------~~~~~~~--~~~~~w-~~~~~n~~~~~v~~~l 385 (726)
T PRK05402 320 FVDACHQAGIGVILDWVPAHFPKDAHGL----ARFDGTAL-Y------EHADPRE--GEHPDW-GTLIFNYGRNEVRNFL 385 (726)
T ss_pred HHHHHHHCCCEEEEEECCCCCCCCccch----hccCCCcc-e------eccCCcC--CccCCC-CCccccCCCHHHHHHH
Confidence 9999999999999999999998865421 11221110 0 0001000 000111 2246899999999999
Q ss_pred HHHHHHHHHhcCCCeEEecccCCC------------------------cHHHHHHHHHhcC---C-ceEEEcccCCCCCC
Q 014892 178 IAWLRWLRNTVGFQDFRFDFARGY------------------------SAKYVKEYIEGAR---P-IFSVGEYWDSCNYN 229 (416)
Q Consensus 178 ~~~~~~w~~~~gvDGfRlD~a~~~------------------------~~~~~~~~~~~~~---~-~~~vgE~~~~~~~~ 229 (416)
++++++|++++||||||+|++.++ ..+||+++++.++ | .+++||.+...+.
T Consensus 386 ~~~~~~W~~e~~iDG~R~D~v~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~fl~~~~~~~~~~~p~~~liaE~~~~~~~- 464 (726)
T PRK05402 386 VANALYWLEEFHIDGLRVDAVASMLYLDYSRKEGEWIPNIYGGRENLEAIDFLRELNAVVHEEFPGALTIAEESTAWPG- 464 (726)
T ss_pred HHHHHHHHHHhCCcEEEECCHHHhhhccccccccccccccccCcCCHHHHHHHHHHHHHHHHHCCCeEEEEECCCCCcC-
Confidence 999999999999999999987544 3579999988765 4 7899995532100
Q ss_pred CCCCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHhc-CchhhhhhhcCCCCCccccccCcceecccCCCCCC--
Q 014892 230 SHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVK-GQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGS-- 306 (416)
Q Consensus 230 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~fl~nHD~~R-- 306 (416)
........+.+++..++......+...+. ....+....-........... ...++++|||+.+
T Consensus 465 -------------~~~~~~~~G~gfd~~wn~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-e~~~l~~sHD~~~~g 530 (726)
T PRK05402 465 -------------VTRPTEEGGLGFGYKWNMGWMHDTLDYMERDPIYRKYHHNELTFSLLYAYS-ENFVLPLSHDEVVHG 530 (726)
T ss_pred -------------ccccccCCCCCCCceecCCcchHHHHHHhhCcccccccccchhHHHhHhhh-ccccCCCCCceeeeC
Confidence 00000011112444444443333333321 111000000000000000011 1235678999964
Q ss_pred ---CCCCCCCC----hhhHHHHHHHHhcCCCeeEEecCCcCC------------Cc-------hhHHHHHHHHHHHHHhC
Q 014892 307 ---TQAHWPFP----SNHIMEGYAYILMHPGIPSVFYDHFYD------------WG-------DSIHNQIVKLMDVRRQQ 360 (416)
Q Consensus 307 ---~~~~~~~~----~~~~~~a~a~llt~pGiP~Iy~G~E~g------------w~-------~~l~~~~~~Li~lR~~~ 360 (416)
+...+..+ ..+++++++++||+||+||||||+|+| |+ .++.+++|+|++||+++
T Consensus 531 ~~~l~~~~~g~~~~~~~~lrl~~~~~~t~pG~Plif~G~E~g~~~~~~~~~~l~W~~~~~~~~~~l~~~~k~Li~Lr~~~ 610 (726)
T PRK05402 531 KGSLLGKMPGDDWQKFANLRAYYGYMWAHPGKKLLFMGGEFGQGREWNHDASLDWHLLDFPWHRGVQRLVRDLNHLYRAE 610 (726)
T ss_pred cccHHhhCCCCHHHHHHHHHHHHHHHHHCCCcCEeeCchhcCCCCCCCccCcCCccccCCcchHHHHHHHHHHHHHHHhC
Confidence 33333322 246889999999999999999999975 43 36999999999999999
Q ss_pred cccCCCC-----eEEEEe---cCCEEEEEE--C---CEEEEEEcCCCC--------CCCCCCcEEeeeCCc
Q 014892 361 DIHSRSS-----IKILEA---QSNLYSAII--G---DKVCMKIGDGSW--------CPAGKEWTLATSGHK 410 (416)
Q Consensus 361 ~~l~~G~-----~~~~~~---~~~~~~~~R--~---~~~lvvinn~~~--------~~~~~~~~~~ls~~~ 410 (416)
|+|+.|+ ++.+.. ++++++|.| + ++++||+|.++. .|.++.|+.+++...
T Consensus 611 ~aL~~g~~~~~~~~~~~~~~~~~~vlaf~R~~~~~~~~vlvv~N~~~~~~~~y~i~~p~~g~~~~ilnsd~ 681 (726)
T PRK05402 611 PALHELDFDPEGFEWIDADDAENSVLSFLRRGKDDGEPLLVVCNFTPVPRHDYRLGVPQAGRWREVLNTDA 681 (726)
T ss_pred hhhhccccCcCCeeEEecccCCCCEEEEEEecCCCCCeEEEEEeCCCCcccceEECCCCCCeEEEEEcCcc
Confidence 9998764 344543 346999998 2 568999998653 244578999998764
|
|
| >PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-55 Score=426.46 Aligned_cols=280 Identities=24% Similarity=0.422 Sum_probs=202.1
Q ss_pred CcHHHHHhhhhhHHHcCCCEEEeCCCCCCC-CCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccccCcCC
Q 014892 43 DWWRNLERKVPDISKSGFTSVWLPPATHSF-APEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGT 121 (416)
Q Consensus 43 G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~-~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~ 121 (416)
|||+||++||||||+||||+|||+||++++ ++|||+|.||++|+|+|||++||++||++||++||+||+|+|+||++..
T Consensus 1 Gd~~gi~~kLdyl~~lGv~~I~l~Pi~~~~~~~~gY~~~d~~~vd~~~Gt~~d~~~Lv~~~h~~gi~VilD~V~NH~~~~ 80 (316)
T PF00128_consen 1 GDFRGIIDKLDYLKDLGVNAIWLSPIFESPNGYHGYDPSDYYAVDPRFGTMEDFKELVDAAHKRGIKVILDVVPNHTSDD 80 (316)
T ss_dssp SSHHHHHHTHHHHHHHTESEEEESS-EESSSSTTTTSESEEEEESTTTBHHHHHHHHHHHHHHTTCEEEEEEETSEEETT
T ss_pred CCHHHHHHhhHHHHHcCCCceecccccccccccccccceeeeccccccchhhhhhhhhhccccccceEEEeeeccccccc
Confidence 899999999999999999999999999997 8999999999999999999999999999999999999999999999999
Q ss_pred CCCCCC----------cccccCC----CCCCCCCCceecCCCCC--CCC-CC--CCCCCCCCcCCCCCHHHHHHHHHHHH
Q 014892 122 TQGHGG----------KYNRYDG----IPLSWDEHAVTSCTGGL--GNG-ST--GDNFHGVPNIDHTQHFVRKDIIAWLR 182 (416)
Q Consensus 122 ~~~~~~----------~~~~f~~----~~~~~~~~~~~~~~~~~--~~~-~~--~~~~~~~~dln~~~~~v~~~l~~~~~ 182 (416)
++++.. .|..+.. .+..|.. ..++. ... .. .+.+..+||||++||+||++|+++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~dln~~n~~v~~~i~~~~~ 155 (316)
T PF00128_consen 81 HPWFQDSLNYFDNPYSDYYYWRDGEGSPPGNWYS-----YFGGSNWEYDDWGDEYQFWSDLPDLNYENPEVREYIIDVLK 155 (316)
T ss_dssp SHHHHHHHTHTTSTTGTTBEEESBTSTTSSTBBC-----STTTSSEESCHHTHCHSSSTTSEEBETTSHHHHHHHHHHHH
T ss_pred cccccccccccccccccceeeccccccccccccc-----ccccccccccccccccccccccchhhhhhhhhhhhhccccc
Confidence 986321 1111110 0011110 00000 000 01 24678999999999999999999999
Q ss_pred HHHHhcCCCeEEecccCCCcHHHHHHHHHhcC----CceEEEcccCCCCCCCCCCCCccchhhHhHhhhh-ccCCCcccc
Q 014892 183 WLRNTVGFQDFRFDFARGYSAKYVKEYIEGAR----PIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWI-DGTGQLSAA 257 (416)
Q Consensus 183 ~w~~~~gvDGfRlD~a~~~~~~~~~~~~~~~~----~~~~vgE~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~ 257 (416)
+|+ +.||||||+|+|++++.++|++++++++ ..+++||+|... ...+..+. .........
T Consensus 156 ~w~-~~giDGfR~D~~~~~~~~~~~~~~~~~~~~~~~~~~i~E~~~~~--------------~~~~~~~~~~~~~~~~~~ 220 (316)
T PF00128_consen 156 FWI-EEGIDGFRLDAAKHIPKEFWKEFRDEVKEEKPDFFLIGEVWGGD--------------NEDLRQYAYDGYFDLDSV 220 (316)
T ss_dssp HHH-HTTESEEEETTGGGSSHHHHHHHHHHHHHHHTTSEEEEEESSSS--------------HHHHHHHHHHGTTSHSEE
T ss_pred chh-hceEeEEEEccccccchhhHHHHhhhhhhhccccceeeeeccCC--------------ccccchhhhccccccchh
Confidence 999 7789999999999999999999998876 378999999762 12222221 111122334
Q ss_pred cCchhhHHHHHHh----cCc--hhhhhhhcCCCCCccccccCcceecccCCCCCCCCCCCCCChhhHHHHHHHHhcCCCe
Q 014892 258 FDFTTKGILQEAV----KGQ--FWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFPSNHIMEGYAYILMHPGI 331 (416)
Q Consensus 258 fdf~~~~~l~~~~----~~~--~~~~~~~~~~~~~~~~~~p~~~~~fl~nHD~~R~~~~~~~~~~~~~~a~a~llt~pGi 331 (416)
+++.......... .+. ...+............ .+...++|++|||++|+.+.+.....++++|++++||+||+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~f~~nHD~~r~~~~~~~~~~~~~~a~~~ll~~pG~ 299 (316)
T PF00128_consen 221 FDFPDYGLRSSFFDFWRHGDGDASDLANWLSSWQSSYP-DPYRAVNFLENHDTPRFASRFGNNRDRLKLALAFLLTSPGI 299 (316)
T ss_dssp EHHHHHHHHHHHHHHHTTTSSHHHHHHHHHHHHHHHST-TGGGEEEESSHTTSSTHHHHTTTHHHHHHHHHHHHHHSSSE
T ss_pred hcccccccccchhhhhccccchhhhhhhhhhhhhhhhc-ccceeeecccccccccchhhhcccchHHHHHHHHHHcCCCc
Confidence 5555443333332 111 1122111110000000 13477999999999998877764444899999999999999
Q ss_pred eEEecCCcCCCc
Q 014892 332 PSVFYDHFYDWG 343 (416)
Q Consensus 332 P~Iy~G~E~gw~ 343 (416)
|+||||||+|..
T Consensus 300 P~iy~G~E~g~~ 311 (316)
T PF00128_consen 300 PMIYYGDEIGMT 311 (316)
T ss_dssp EEEETTGGGTBB
T ss_pred cEEEeChhccCC
Confidence 999999999854
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A .... |
| >PRK03705 glycogen debranching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-53 Score=439.41 Aligned_cols=354 Identities=16% Similarity=0.236 Sum_probs=245.0
Q ss_pred eccCceeEEEeeecCCCC---------CCcHHHHHh--hhhhHHHcCCCEEEeCCCCCCC-----------CCCCccccc
Q 014892 24 IRNGREILFQGFNWESCK---------HDWWRNLER--KVPDISKSGFTSVWLPPATHSF-----------APEGYLPQN 81 (416)
Q Consensus 24 ~~~~~~~~~q~f~~~~~~---------~G~~~gi~~--~LdyLk~LGv~~I~L~Pi~~~~-----------~~~GY~~~d 81 (416)
....+.|||++..++++. .|+|.|+++ +|||||+||||+||||||+++. .||||+|.|
T Consensus 146 ~~~~~~vIYE~hvr~ft~~~~~~~~~~~Gtf~g~~~~~~LdYLk~LGvt~I~L~Pv~~~~~~~~~~~~g~~~ywGYd~~~ 225 (658)
T PRK03705 146 TPWGSTVIYEAHVRGLTYLHPEIPVEIRGTYAALGHPVMIAYLKQLGITALELLPVAQFASEPRLQRMGLSNYWGYNPLA 225 (658)
T ss_pred CCccccEEEEEehhhhcccCCCCCccccccHHHhhcccchHHHHHcCCCEEEecCcccCCCcccccccccccccCccccc
Confidence 334578999999998863 289999997 4999999999999999999864 479999999
Q ss_pred CCCCCCCCCCH-----HHHHHHHHHHHHCCCEEEEEEccccCcCCCCCCCCcccccCC---CCCCCCCCceecCCCCCCC
Q 014892 82 LYSLNSSYGSE-----HLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDG---IPLSWDEHAVTSCTGGLGN 153 (416)
Q Consensus 82 ~~~id~~~Gt~-----~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~---~~~~~~~~~~~~~~~~~~~ 153 (416)
||+|+|+|||. +|||+||++||++||+||||+|+||++..... +.+..+.+ ..+.|.. .++...
T Consensus 226 yfa~d~~ygt~~~~~~~efk~LV~~~H~~GI~VIlDvV~NHt~~~~~~--~~~~~~~~~d~~~yy~~~------~~g~~~ 297 (658)
T PRK03705 226 MFALDPAYASGPETALDEFRDAVKALHKAGIEVILDVVFNHSAELDLD--GPTLSLRGIDNRSYYWIR------EDGDYH 297 (658)
T ss_pred ccccccccCCCCcchHHHHHHHHHHHHHCCCEEEEEEcccCccCcCCC--CcchhcccCCCccceEEC------CCCCcC
Confidence 99999999985 79999999999999999999999999974220 11111111 0011111 111111
Q ss_pred CCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCc--HH------HHHHHHHh-c-CCceEEEccc
Q 014892 154 GSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYS--AK------YVKEYIEG-A-RPIFSVGEYW 223 (416)
Q Consensus 154 ~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~--~~------~~~~~~~~-~-~~~~~vgE~~ 223 (416)
.+. ...++||+++|+||++|++++++|+++|||||||+|+|.++. +. +++++... + ...+++||.|
T Consensus 298 ~~~----g~g~~ln~~~p~Vr~~iid~l~~W~~e~gVDGFRfD~a~~l~~~~~~~~~~~~~~ai~~d~vl~~~~ligE~W 373 (658)
T PRK03705 298 NWT----GCGNTLNLSHPAVVDWAIDCLRYWVETCHVDGFRFDLATVLGRTPEFRQDAPLFTAIQNDPVLSQVKLIAEPW 373 (658)
T ss_pred CCC----CccCcccCCCHHHHHHHHHHHHHHHHHhCCCEEEEEcHhhhCcCcccchhhHHHHHHhhCccccceEEEEecc
Confidence 122 235799999999999999999999999999999999998886 22 33444331 1 1367999999
Q ss_pred CCCCCCCCCCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHhcCc---hhhhhhhcCCCCCcc---ccccCccee
Q 014892 224 DSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKGQ---FWRLRDAQGKPPGVM---GWWPSRAVT 297 (416)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~~~~---~~~~~~~~~~~~~~~---~~~p~~~~~ 297 (416)
+..+- .+ ++..+ ...-+.|+..++..++..+.+. ..++...+.....++ ...|.+++|
T Consensus 374 d~~~~-----~~-------~~g~~----~~~~~~~Nd~fRd~ir~f~~~~~~~~~~~~~~l~gs~~~~~~~~~~p~~siN 437 (658)
T PRK03705 374 DIGPG-----GY-------QVGNF----PPPFAEWNDHFRDAARRFWLHGDLPLGEFAGRFAASSDVFKRNGRLPSASIN 437 (658)
T ss_pred cCCCC-----hh-------hhcCC----CcceEEEchHHHHHHHHHHccCCCcHHHHHHHHhcchhhccccCCCCCeEEE
Confidence 75310 00 00000 1123567777888888775322 223333332221111 234678999
Q ss_pred cccCCCCCCCCCCC---------C-----------------------------CChhhHHHHHHHHhcCCCeeEEecCCc
Q 014892 298 FLDNHDTGSTQAHW---------P-----------------------------FPSNHIMEGYAYILMHPGIPSVFYDHF 339 (416)
Q Consensus 298 fl~nHD~~R~~~~~---------~-----------------------------~~~~~~~~a~a~llt~pGiP~Iy~G~E 339 (416)
||++||+.++...+ + ...++.|+|+++||+++|+||||+|||
T Consensus 438 yv~~HD~~TL~D~~~~~~~hn~~nge~n~dg~~~n~s~n~g~eg~~~~~~~~~~r~~~~r~~~a~l~~sqG~P~i~~GdE 517 (658)
T PRK03705 438 LVTAHDGFTLRDCVCFNQKHNEANGEENRDGTNNNYSNNHGKEGLGADLDLVERRRASIHALLTTLLLSQGTPMLLAGDE 517 (658)
T ss_pred EEEeCCCccHHHHHhhhccchhhcccccccccccccccccCccCCCccHHHHHHHHHHHHHHHHHHHHcCCchHHHhhHH
Confidence 99999996542200 0 012357899999999999999999999
Q ss_pred CC--------------------Cc---hhHHHHHHHHHHHHHhCcccCCCCe--------EEEEec------------CC
Q 014892 340 YD--------------------WG---DSIHNQIVKLMDVRRQQDIHSRSSI--------KILEAQ------------SN 376 (416)
Q Consensus 340 ~g--------------------w~---~~l~~~~~~Li~lR~~~~~l~~G~~--------~~~~~~------------~~ 376 (416)
++ |+ .++++++|+||+|||+||+|+..++ ..+..+ ..
T Consensus 518 ~grtq~G~nN~y~~~~~i~~~dW~~~~~~l~~f~k~Li~lRk~~~~l~~~~~~~~~~~~~~w~~~~~~~~~~~~w~~~~~ 597 (658)
T PRK03705 518 HGHSQHGNNNAYCQDNALTWLDWSQADRGLTAFTAALIHLRQRIPALTQNRWWEEGDGNVRWLNRQAQPLSADEWQQGPK 597 (658)
T ss_pred hccCCCCCCCCccCCCCccccccchhhhHHHHHHHHHHHHHHhChhhcccccccCCCCCeEEeCCCCCcCChhHhCCcce
Confidence 84 33 3799999999999999999986554 222222 23
Q ss_pred EEEEEECCEEEEEEcCCCCC-----CCCCCcEEee
Q 014892 377 LYSAIIGDKVCMKIGDGSWC-----PAGKEWTLAT 406 (416)
Q Consensus 377 ~~~~~R~~~~lvvinn~~~~-----~~~~~~~~~l 406 (416)
.+++...+.++|++|..... |. +.|+.++
T Consensus 598 ~~~~~~~~~~~v~~N~~~~~~~~~lp~-~~w~~~~ 631 (658)
T PRK03705 598 QLQILLSDRWLIAINATLEVTEIVLPE-GEWHAIP 631 (658)
T ss_pred EEEEEECCCEEEEECCCCCCeEEECCC-cceEEEE
Confidence 45565567789999886432 44 5799884
|
|
| >PRK14706 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-51 Score=427.49 Aligned_cols=351 Identities=15% Similarity=0.141 Sum_probs=245.1
Q ss_pred ceeEEEeeecCCCC--C---CcHHHHHhhh-hhHHHcCCCEEEeCCCCCCC--CCCCcccccCCCCCCCCCCHHHHHHHH
Q 014892 28 REILFQGFNWESCK--H---DWWRNLERKV-PDISKSGFTSVWLPPATHSF--APEGYLPQNLYSLNSSYGSEHLLKALL 99 (416)
Q Consensus 28 ~~~~~q~f~~~~~~--~---G~~~gi~~~L-dyLk~LGv~~I~L~Pi~~~~--~~~GY~~~d~~~id~~~Gt~~d~~~Lv 99 (416)
..+||++-..+++. + |+|++++++| +|||+||||+|+||||++++ .+|||++++||+++++||+++|||+||
T Consensus 144 ~~~IYE~Hvg~f~~~~~g~~~ty~~~~~~l~~ylk~lG~t~velmPv~e~~~~~~wGY~~~~~~~~~~~~g~~~~~~~lv 223 (639)
T PRK14706 144 PISIYEVHVGSWARRDDGWFLNYRELAHRLGEYVTYMGYTHVELLGVMEHPFDGSWGYQVTGYYAPTSRLGTPEDFKYLV 223 (639)
T ss_pred CcEEEEEehhhcccCCCCCccCHHHHHHHHHHHHHHcCCCEEEccchhcCCCCCCCCcCcccccccccccCCHHHHHHHH
Confidence 36899998877643 2 5999999997 89999999999999999875 479999999999999999999999999
Q ss_pred HHHHHCCCEEEEEEccccCcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHH
Q 014892 100 HKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIA 179 (416)
Q Consensus 100 ~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~ 179 (416)
++||++||+||||+|+||++.+..+. ..|++.+. ..+.++.. .....|.. ..+|+.+|+||++|++
T Consensus 224 ~~~H~~gi~VilD~v~nH~~~~~~~l----~~~dg~~~-------y~~~~~~~--g~~~~w~~-~~~~~~~~eVr~~l~~ 289 (639)
T PRK14706 224 NHLHGLGIGVILDWVPGHFPTDESGL----AHFDGGPL-------YEYADPRK--GYHYDWNT-YIFDYGRNEVVMFLIG 289 (639)
T ss_pred HHHHHCCCEEEEEecccccCcchhhh----hccCCCcc-------eeccCCcC--CcCCCCCC-cccCCCCHHHHHHHHH
Confidence 99999999999999999999865421 11221110 11111100 00112222 2489999999999999
Q ss_pred HHHHHHHhcCCCeEEecccCCC----------------------cHHHHHHHHHhcC---C-ceEEEcccCCCCCCCCCC
Q 014892 180 WLRWLRNTVGFQDFRFDFARGY----------------------SAKYVKEYIEGAR---P-IFSVGEYWDSCNYNSHGL 233 (416)
Q Consensus 180 ~~~~w~~~~gvDGfRlD~a~~~----------------------~~~~~~~~~~~~~---~-~~~vgE~~~~~~~~~~~~ 233 (416)
++++|++++||||||+|++.+| ...||+++.+.++ | .++|||.+...+
T Consensus 290 ~~~~W~~e~~iDG~R~Dav~~~ly~d~~~~~~~~~~~gg~~n~~a~~fl~~ln~~v~~~~p~~~~iAE~~~~~~------ 363 (639)
T PRK14706 290 SALKWLQDFHVDGLRVDAVASMLYLDFSRTEWVPNIHGGRENLEAIAFLKRLNEVTHHMAPGCMMIAEESTSFP------ 363 (639)
T ss_pred HHHHHHHHhCCCeEEEeeehheeecccCcccccccccCCcccHHHHHHHHHHHHHHHHhCCCeEEEEECCCCCc------
Confidence 9999999999999999998876 2468888877654 5 789999876421
Q ss_pred CCccchhhHhHhhhhccCCCcccccCchhhHHHHHHhc-CchhhhhhhcCCCCCcccccc-CcceecccCCCCCCCCC--
Q 014892 234 DYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVK-GQFWRLRDAQGKPPGVMGWWP-SRAVTFLDNHDTGSTQA-- 309 (416)
Q Consensus 234 ~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~p-~~~~~fl~nHD~~R~~~-- 309 (416)
.+..-...+-+++..++......+.+.+. ....+.... .. ........ .....+++|||+.+...
T Consensus 364 ---------~v~~~~~~G~gFD~~w~~~w~~~~l~~~~~~~~~r~~~~-~~-lt~~~~y~~~e~~il~~SHDev~~~k~s 432 (639)
T PRK14706 364 ---------GVTVPTPYGLGFDYKWAMGWMNDTLAYFEQDPLWRKYHH-HK-LTFFNVYRTSENYVLAISHDEVVHLKKS 432 (639)
T ss_pred ---------CcccccCCCCccccEeccHHHHHHHHHhccCchhhhhch-hc-cchhhhhhccccEecCCCCccccCCccc
Confidence 01110111224556666555554554442 222221111 00 00000011 12234789999988532
Q ss_pred ---CCCCC----hhhHHHHHHHHhcCCCeeEEecCCcCC------------Cc-------hhHHHHHHHHHHHHHhCccc
Q 014892 310 ---HWPFP----SNHIMEGYAYILMHPGIPSVFYDHFYD------------WG-------DSIHNQIVKLMDVRRQQDIH 363 (416)
Q Consensus 310 ---~~~~~----~~~~~~a~a~llt~pGiP~Iy~G~E~g------------w~-------~~l~~~~~~Li~lR~~~~~l 363 (416)
....+ ..++++++++++|+||+|+||||+|+| |. ..+.+++|+|++||+++|+|
T Consensus 433 l~~k~~g~~~~~~a~~r~~~~~~~t~PG~pLiFmG~EfG~~~ew~~~~~l~W~l~~~~~~~~l~~~~k~L~~L~k~~paL 512 (639)
T PRK14706 433 MVMKMPGDWYTQRAQYRAFLAMMWTTPGKKLLFMGQEFAQGTEWNHDASLPWYLTDVPDHRGVMNLVRRLNQLYRERPDW 512 (639)
T ss_pred hHhHcCCCHHHHHHHHHHHHHHHHhCCCCcEEEeccccCCCCCCCcccCCCCcccCCHHHHHHHHHHHHHHHHHHhCHHH
Confidence 12211 246899999999999999999999997 32 24889999999999999999
Q ss_pred CCCC-----eEEEEe---cCCEEEEEE---C--CEEEEEEcCCCC--------CCCCCCcEEeeeCC
Q 014892 364 SRSS-----IKILEA---QSNLYSAII---G--DKVCMKIGDGSW--------CPAGKEWTLATSGH 409 (416)
Q Consensus 364 ~~G~-----~~~~~~---~~~~~~~~R---~--~~~lvvinn~~~--------~~~~~~~~~~ls~~ 409 (416)
..|+ ++.+.. +++++||.| + +.++||+|.+.. .|..|.|+.+++..
T Consensus 513 ~~gd~~~~~f~wi~~~d~~~~VlaF~R~~~~~~~~vlvV~Nfs~~~~~~y~ig~p~~g~~~~i~nsd 579 (639)
T PRK14706 513 HRGDKREEGLYWVSADDTDNSVYAYVRRDSESGAWSLAVANLTPVYREQYRIGVPQGGEYRVLLSTD 579 (639)
T ss_pred hhCCCCCCCeEEEEeecCCCCEEEEEEecCCCCeeEEEEEeCCCCCcCCeEECCCCCCeEEEEEcCC
Confidence 8776 334433 357999998 1 238899999663 25568898888654
|
|
| >PRK14510 putative bifunctional 4-alpha-glucanotransferase/glycogen debranching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-50 Score=440.84 Aligned_cols=321 Identities=16% Similarity=0.180 Sum_probs=226.2
Q ss_pred ccCceeEEEeeecCCCC-----CCcHHHHHhhh------hhHHHcCCCEEEeCCCCCCC-----------CCCCcccccC
Q 014892 25 RNGREILFQGFNWESCK-----HDWWRNLERKV------PDISKSGFTSVWLPPATHSF-----------APEGYLPQNL 82 (416)
Q Consensus 25 ~~~~~~~~q~f~~~~~~-----~G~~~gi~~~L------dyLk~LGv~~I~L~Pi~~~~-----------~~~GY~~~d~ 82 (416)
.-.+.+||++-.+.++. .|+++|+.++| +|||+||||+||||||+++. +||||++.||
T Consensus 155 ~~~d~vIYE~hvr~ft~~~~~~gg~~~Gt~~~l~~~~~i~yLk~LGvt~I~L~Pi~~~~~~~~~~~~g~~~yWGY~~~~y 234 (1221)
T PRK14510 155 DWDDSPLYEMNVRGFTLRHDFFPGNLRGTFAKLAAPEAISYLKKLGVSIVELNPIFASVDEHHLPQLGLSNYWGYNTVAF 234 (1221)
T ss_pred CcccCeEEEEccchhhccCCCCCcccCcHHhhcCCchhHHHHHHcCCCEEEeCCccccCcccccccccCcCcCCCCCCCC
Confidence 33567999988877653 14555555555 49999999999999999874 3689999999
Q ss_pred CCCCCCCC--CHHHHHHHHHHHHHCCCEEEEEEccccCcCCCCCCCC-cccccCCCCCCCCCCceecCCCCCCCCCCCCC
Q 014892 83 YSLNSSYG--SEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGG-KYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDN 159 (416)
Q Consensus 83 ~~id~~~G--t~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (416)
++|+|+|| +.+|||+||++||++||+||||+|+||++.++..... .+..+.. ..|... .....+....+.+|
T Consensus 235 fa~dp~yg~~~~~efk~lV~~~H~~GI~VILDvV~NHt~~~~~~~p~~~~~~~d~--~~yy~~--~~~~~~~y~~~~G~- 309 (1221)
T PRK14510 235 LAPDPRLAPGGEEEFAQAIKEAQSAGIAVILDVVFNHTGESNHYGPTLSAYGSDN--SPYYRL--EPGNPKEYENWWGC- 309 (1221)
T ss_pred CCcChhhccCcHHHHHHHHHHHHHCCCEEEEEEccccccCCCCCCCcccccCCCC--CCceEe--cCCCCCcccCCCCC-
Confidence 99999999 9999999999999999999999999999987642100 0000110 001000 00000001111222
Q ss_pred CCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCC---cHHHHHHHHHhc---CC------ceEEEcccCCCC
Q 014892 160 FHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGY---SAKYVKEYIEGA---RP------IFSVGEYWDSCN 227 (416)
Q Consensus 160 ~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~---~~~~~~~~~~~~---~~------~~~vgE~~~~~~ 227 (416)
...+|+++|+|++++++++++|++ +||||||||+|.++ +.+||+++...+ ++ .+++||.|+..+
T Consensus 310 ---gn~~n~~~p~v~~~i~d~lr~Wv~-~gVDGfRfDla~~l~r~~~~f~~~~~~~l~ai~~d~~l~~~~ligE~Wd~~~ 385 (1221)
T PRK14510 310 ---GNLPNLERPFILRLPMDVLRSWAK-RGVDGFRLDLADELAREPDGFIDEFRQFLKAMDQDPVLRRLKMIAEVWDDGL 385 (1221)
T ss_pred ---CCccccCCHHHHHHHHHHHHHHHH-hCCCEEEEechhhhccCccchHHHHHHHHHHhCCCcCcccCcEEEecccCCC
Confidence 234677799999999999999997 99999999999999 888988765543 33 245999998531
Q ss_pred --CCCCCCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHhcCc---hhhhhhhcCCCCCccc---cccCcceecc
Q 014892 228 --YNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKGQ---FWRLRDAQGKPPGVMG---WWPSRAVTFL 299 (416)
Q Consensus 228 --~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~---~~p~~~~~fl 299 (416)
++.+. + ....+.+|++++..++..+.|+ ..++.+.+......+. ..|..++||+
T Consensus 386 ~~~~~g~--------------f----~~~~~~~N~~frd~vr~f~~g~~~~~~~~a~~l~gs~d~~~~~~~~~~~~iNfi 447 (1221)
T PRK14510 386 GGYQYGK--------------F----PQYWGEWNDPLRDIMRRFWLGDIGMAGELATRLAGSADIFPHRRRNFSRSINFI 447 (1221)
T ss_pred CccccCC--------------C----CcceeeeccHHHHHHHHHhcCCCchHHHHHHHHhCcHhhcCccCCCcccceEEE
Confidence 11100 0 0112568888888988887654 2334443332212111 2345789999
Q ss_pred cCCCCCCCCCCCCC--------------------------------------ChhhHHHHHHHHhcCCCeeEEecCCcCC
Q 014892 300 DNHDTGSTQAHWPF--------------------------------------PSNHIMEGYAYILMHPGIPSVFYDHFYD 341 (416)
Q Consensus 300 ~nHD~~R~~~~~~~--------------------------------------~~~~~~~a~a~llt~pGiP~Iy~G~E~g 341 (416)
+|||+.|+.+.+.. ..+++++|++++||+|||||||||||+|
T Consensus 448 ~~HD~~rl~dl~~y~~khN~ange~nrdg~~~n~s~n~g~eg~t~~~~~~~~r~~~~r~a~~~l~~s~GiP~Iy~GdE~g 527 (1221)
T PRK14510 448 TAHDGFTLLDLVSFNHKHNEANGEDNRDGTPDNQSWNCGVEGYTLDAAIRSLRRRRLRLLLLTLMSFPGVPMLYYGDEAG 527 (1221)
T ss_pred eeCCchHHHHHhhhccccchhccccccCCCCccccccccccCCCCchHHHHHHHHHHHHHHHHHHhCCCCcEEecchhcc
Confidence 99999885432110 1235889999999999999999999986
Q ss_pred --------------------Cc---hhHHHHHHHHHHHHHhCcccCCCCeEEEE
Q 014892 342 --------------------WG---DSIHNQIVKLMDVRRQQDIHSRSSIKILE 372 (416)
Q Consensus 342 --------------------w~---~~l~~~~~~Li~lR~~~~~l~~G~~~~~~ 372 (416)
|+ .++++++|+||+|||++|+|+.|++....
T Consensus 528 ~tq~Gn~n~y~~~~~r~~~~W~~~~~~l~~f~k~Li~lRk~~~~L~~g~~~~~~ 581 (1221)
T PRK14510 528 RSQNGNNNGYAQDNNRGTYPWGNEDEELLSFFRRLIKLRREYGVLRQGEFSSGT 581 (1221)
T ss_pred cccCCCCCCCCCCCccccCCcccccHHHHHHHHHHHHHHHhChhhccCccccCc
Confidence 33 37999999999999999999999887653
|
|
| >PRK12568 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-49 Score=406.26 Aligned_cols=355 Identities=14% Similarity=0.161 Sum_probs=246.6
Q ss_pred ccCceeEEEeeecCCCCC-----CcHHHHHhh-hhhHHHcCCCEEEeCCCCCCC--CCCCcccccCCCCCCCCCCHHHHH
Q 014892 25 RNGREILFQGFNWESCKH-----DWWRNLERK-VPDISKSGFTSVWLPPATHSF--APEGYLPQNLYSLNSSYGSEHLLK 96 (416)
Q Consensus 25 ~~~~~~~~q~f~~~~~~~-----G~~~gi~~~-LdyLk~LGv~~I~L~Pi~~~~--~~~GY~~~d~~~id~~~Gt~~d~~ 96 (416)
...+.+||.+-..+++.+ +++++++++ |||||+||||+||||||++++ ++|||+|++||+++|+||+++|||
T Consensus 243 ~~~~~~IYEvHvgsf~~~~~~~~~~~~~la~~ll~ylk~LGvt~I~LmPi~e~~~~~~wGY~~~~~~a~~~~~G~~~dfk 322 (730)
T PRK12568 243 VPAPLSIYEVHAASWRRDGHNQPLDWPTLAEQLIPYVQQLGFTHIELLPITEHPFGGSWGYQPLGLYAPTARHGSPDGFA 322 (730)
T ss_pred CCCCcEEEEEEhHHhcCCCCCCCCCHHHHHHHHHHHHHHcCCCEEEECccccCCCCCCCCCCCCcCCccCcccCCHHHHH
Confidence 345567999888766542 489999998 599999999999999999876 479999999999999999999999
Q ss_pred HHHHHHHHCCCEEEEEEccccCcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHH
Q 014892 97 ALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKD 176 (416)
Q Consensus 97 ~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~ 176 (416)
+||++||++||+||||+|+||++.+..+ ...|++.....+ .++.. ....+|..+ .+|+.+|+||++
T Consensus 323 ~lV~~~H~~Gi~VIlD~V~nH~~~d~~~----l~~fdg~~~Ye~-------~d~~~--g~~~~W~~~-~~N~~~peVr~~ 388 (730)
T PRK12568 323 QFVDACHRAGIGVILDWVSAHFPDDAHG----LAQFDGAALYEH-------ADPRE--GMHRDWNTL-IYNYGRPEVTAY 388 (730)
T ss_pred HHHHHHHHCCCEEEEEeccccCCccccc----cccCCCcccccc-------CCCcC--CccCCCCCe-ecccCCHHHHHH
Confidence 9999999999999999999999986431 112222111111 11000 011123333 589999999999
Q ss_pred HHHHHHHHHHhcCCCeEEecccCCCc------------------------HHHHHHHHHhcC---C-ceEEEcccCCCCC
Q 014892 177 IIAWLRWLRNTVGFQDFRFDFARGYS------------------------AKYVKEYIEGAR---P-IFSVGEYWDSCNY 228 (416)
Q Consensus 177 l~~~~~~w~~~~gvDGfRlD~a~~~~------------------------~~~~~~~~~~~~---~-~~~vgE~~~~~~~ 228 (416)
|++++++|++++||||||+|+++.|. .+||+++.+.++ | .++|||.+..-+
T Consensus 389 li~~a~~Wl~eyhIDG~R~DAva~mly~d~~r~~g~w~pn~~gg~en~ea~~Fl~~ln~~v~~~~P~~~~IAEest~~p- 467 (730)
T PRK12568 389 LLGSALEWIEHYHLDGLRVDAVASMLYRDYGRAEGEWVPNAHGGRENLEAVAFLRQLNREIASQFPGVLTIAEESTAWP- 467 (730)
T ss_pred HHHHHHHHHHHhCceEEEEcCHhHhhhhccccccccccccccCCccChHHHHHHHHHHHHHHHHCCCeEEEEEcCCCCc-
Confidence 99999999999999999999886541 369999887765 5 789999653211
Q ss_pred CCCCCCCccchhhHhHhhhhc-cCCCcccccCchhhHHHHHHhcCc-hhhhhhhcCCCCCccccccCcceecccCCCCC-
Q 014892 229 NSHGLDYNQDSHRQRIINWID-GTGQLSAAFDFTTKGILQEAVKGQ-FWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTG- 305 (416)
Q Consensus 229 ~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~fdf~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~fl~nHD~~- 305 (416)
.+..-.. ++-+++..++......+.+.+..+ ..+....-.-..+++ +.-...+.+..|||+.
T Consensus 468 --------------~vt~p~~~gGlGFd~kwn~gwm~d~l~y~~~dp~~r~~~h~~ltf~~~-y~~~e~fvlp~SHDEvv 532 (730)
T PRK12568 468 --------------GVTAPISDGGLGFTHKWNMGWMHDTLHYMQRDPAERAHHHSQLTFGLV-YAFSERFVLPLSHDEVV 532 (730)
T ss_pred --------------cccccccCCCCCcCcEeCChhHHHHHHHHhhCchhhhhhhhhhhhhhh-hhhhccEeccCCCcccc
Confidence 1111111 112466667776666666665432 222111100000111 1112334567899993
Q ss_pred ----CCCCCCCCCh----hhHHHHHHHHhcCCCeeEEecCCcCC------------Cc-------hhHHHHHHHHHHHHH
Q 014892 306 ----STQAHWPFPS----NHIMEGYAYILMHPGIPSVFYDHFYD------------WG-------DSIHNQIVKLMDVRR 358 (416)
Q Consensus 306 ----R~~~~~~~~~----~~~~~a~a~llt~pGiP~Iy~G~E~g------------w~-------~~l~~~~~~Li~lR~ 358 (416)
++......+. ..+|+.+++|+|.||.|+||+|+||| |. ..+.+++|+|++||+
T Consensus 533 hgk~sl~~kmpGd~~~k~a~lR~~~~~~~~~PGkkLlFmG~Efgq~~ew~~~~~ldW~ll~~~~h~~~~~~~~dLn~ly~ 612 (730)
T PRK12568 533 HGTGGLLGQMPGDDWRRFANLRAYLALMWAHPGDKLLFMGAEFGQWADWNHDQSLDWHLLDGARHRGMQQLVGDLNAALR 612 (730)
T ss_pred cCchhhhhcCCCCHHHHHHHHHHHHHHHHhCCCcceeeCchhhCCcccccCCCCccccccCChhHHHHHHHHHHHHHHHH
Confidence 4444444333 24788999999999999999999986 32 258899999999999
Q ss_pred hCcccCCCC-----eEEEEec---CCEEEEEE-C-----CEEEEEEcCCCC--------CCCCCCcEEeeeCC
Q 014892 359 QQDIHSRSS-----IKILEAQ---SNLYSAII-G-----DKVCMKIGDGSW--------CPAGKEWTLATSGH 409 (416)
Q Consensus 359 ~~~~l~~G~-----~~~~~~~---~~~~~~~R-~-----~~~lvvinn~~~--------~~~~~~~~~~ls~~ 409 (416)
++|+|..++ ++.+..+ ++|++|.| + +.++||+|.+.. .|..|.|+..++..
T Consensus 613 ~~paL~~~d~~~~gf~wi~~~d~~~sv~af~R~~~~~~~~~v~vV~Nft~~~~~~Y~ig~p~~G~~~eilNsd 685 (730)
T PRK12568 613 RTPALYRGTHRADGFDWSVADDARNSVLAFIRHDPDGGGVPLLAVSNLTPQPHHDYRVGVPRAGGWREILNTD 685 (730)
T ss_pred hChhhhcccCCCCCeEEEeCCCCCCcEEEEEEecCCCCCCeEEEEECCCCCCccCeEECCCCCCeEEEEEcCc
Confidence 999997653 4445433 46999988 2 337888888653 36678899988754
|
|
| >TIGR02102 pullulan_Gpos pullulanase, extracellular, Gram-positive | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-49 Score=420.68 Aligned_cols=344 Identities=17% Similarity=0.277 Sum_probs=243.2
Q ss_pred cCceeEEEeeecCCCC-----------CCcHHHHHhhhhhHHHcCCCEEEeCCCCCC-------------------CC-C
Q 014892 26 NGREILFQGFNWESCK-----------HDWWRNLERKVPDISKSGFTSVWLPPATHS-------------------FA-P 74 (416)
Q Consensus 26 ~~~~~~~q~f~~~~~~-----------~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~-------------------~~-~ 74 (416)
..+.|||++..++++. .|+|+||+++|||||+||||+||||||++. .. +
T Consensus 449 ~~d~vIYElHVrdFt~d~~~~~~~~~~~Gtf~gl~ekLdYLkeLGVT~I~LmPv~d~~~~~e~~~~~~~~~~~~~~~~yn 528 (1111)
T TIGR02102 449 REDAIIYEAHVRDFTSDPAIAGDLTAQFGTFAAFVEKLDYLQDLGVTHIQLLPVLSYFFVNEFKNKERMLDYASSNTNYN 528 (1111)
T ss_pred ccceEEEEEechhhCcCCCCCcccccCCcCHHHHHHhHHHHHHcCCCEEEEcCccccccccccccccccccccccccccc
Confidence 4578999999998763 399999999999999999999999999862 12 3
Q ss_pred CCcccccCCCCCCCCCC--------HHHHHHHHHHHHHCCCEEEEEEccccCcCCCCCCC--CcccccCCCCCCCCCCce
Q 014892 75 EGYLPQNLYSLNSSYGS--------EHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHG--GKYNRYDGIPLSWDEHAV 144 (416)
Q Consensus 75 ~GY~~~d~~~id~~~Gt--------~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~--~~~~~f~~~~~~~~~~~~ 144 (416)
|||+|.+||+++++||+ .+|||+||++||++||+||||+|+||++..++... +.|+.+. +
T Consensus 529 WGYdp~~yfape~~Ygtdp~dp~~ri~EfK~LV~alH~~GI~VILDVVyNHt~~~~~f~~~~p~Yy~~~-------~--- 598 (1111)
T TIGR02102 529 WGYDPQNYFALSGMYSEDPKDPELRIAEFKNLINEIHKRGMGVILDVVYNHTAKVYIFEDLEPNYYHFM-------D--- 598 (1111)
T ss_pred cCCCcCcCcccccccccCCcCccccHHHHHHHHHHHHHCCCEEEEecccccccccccccccCCCceEee-------C---
Confidence 99999999999999998 48999999999999999999999999998654211 1111100 0
Q ss_pred ecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcHHHHHHHHHhc---CC-ceEEE
Q 014892 145 TSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGA---RP-IFSVG 220 (416)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~~~~~~~~~~~---~~-~~~vg 220 (416)
.++... . ..+..+++.++|+||++|++++++|+++|||||||||++.+++.+++..+..++ +| .+++|
T Consensus 599 ---~~G~~~---~--~~~g~~l~~e~~~vrk~iiDsl~yWv~ey~VDGFRfDl~g~~d~~~~~~~~~~l~~~dP~~~liG 670 (1111)
T TIGR02102 599 ---ADGTPR---T--SFGGGRLGTTHEMSRRILVDSIKYLVDEFKVDGFRFDMMGDHDAASIEIAYKEAKAINPNIIMIG 670 (1111)
T ss_pred ---CCCCcc---c--ccCCCCCCcCCHHHHHHHHHHHHHHHHhcCCcEEEEeccccCCHHHHHHHHHHHHHhCcCEEEEE
Confidence 011110 0 012457999999999999999999999999999999999999999998887664 34 68999
Q ss_pred cccCCCCCCCCCCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHh---------cCc---hhhhhhhcCCCCCcc
Q 014892 221 EYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAV---------KGQ---FWRLRDAQGKPPGVM 288 (416)
Q Consensus 221 E~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~---------~~~---~~~~~~~~~~~~~~~ 288 (416)
|.|+... +...+... .....++... ...+.|+..++..++..+ .|. ...+...+...+..+
T Consensus 671 E~W~~~~---g~~~~~~~---~~~~~~~~~~-~~ig~FnD~~Rd~irg~~~~~~~~gfi~G~~~~~~~l~~~i~g~~~~~ 743 (1111)
T TIGR02102 671 EGWRTYA---GDEGDPVQ---AADQDWMKYT-ETVGVFSDDIRNELKSGFPNEGQPAFITGGARNVQGIFKNIKAQPHNF 743 (1111)
T ss_pred ecccccC---CCCccccc---ccchhhHhcC-CcccEecHHHHHHHhcccccccccccccCCcccHHHHHHhhcCCcccc
Confidence 9997511 00000000 0011222221 125678877777777432 122 122333332221111
Q ss_pred -ccccCcceecccCCCCCCCCCCCC-----C---C------hhhHHHHHHHHhcCCCeeEEecCCcCC------------
Q 014892 289 -GWWPSRAVTFLDNHDTGSTQAHWP-----F---P------SNHIMEGYAYILMHPGIPSVFYDHFYD------------ 341 (416)
Q Consensus 289 -~~~p~~~~~fl~nHD~~R~~~~~~-----~---~------~~~~~~a~a~llt~pGiP~Iy~G~E~g------------ 341 (416)
...|.+.|+|++|||+.++...+. . . ..|.++|.+++|+++|||||++||||+
T Consensus 744 ~~~~P~~~VnYV~aHDn~TL~D~l~~~~~~~~~~~e~~~~~~~r~rla~~llllSQGiPfi~aGqEf~RTK~gnnn~y~~ 823 (1111)
T TIGR02102 744 EADSPGDVVQYIAAHDNLTLHDVIAQSIKKDPKVAENQEEIHRRIRLGNLMVLTSQGTAFIHSGQEYGRTKQFRNPDYRT 823 (1111)
T ss_pred ccCCcccEEEEEecCCCCchHhhhhhccccCcccccchHHHHHHHHHHHHHHHHhCcHhhhhcchhhhcccCCCcccccc
Confidence 236789999999999998733211 0 1 136789999999999999999999962
Q ss_pred ------------------------------------------Cc-----------hhHHHHHHHHHHHHHhCcccCCCCe
Q 014892 342 ------------------------------------------WG-----------DSIHNQIVKLMDVRRQQDIHSRSSI 368 (416)
Q Consensus 342 ------------------------------------------w~-----------~~l~~~~~~Li~lR~~~~~l~~G~~ 368 (416)
|+ .++++++|.||+|||++|+|+.++.
T Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nSY~s~d~iN~lDW~~~~~~~~~~~~~~~~~y~~~LI~lRk~~~~fr~~~~ 903 (1111)
T TIGR02102 824 PVSEDKVPNKSTLMTDVDGNPFRYPYFIHDSYDSSDAINRFDWEKATDADAYPINNKTRDYTAGLIELRRSTDAFRLGSK 903 (1111)
T ss_pred cccccccccccccccccccccccccccccccccCCCccceecccccccccccchhHHHHHHHHHHHHHHhcCccccccch
Confidence 11 1578999999999999999987754
Q ss_pred E-------EEEec--------CCEEEEEE----CCEEEEEEcCCC
Q 014892 369 K-------ILEAQ--------SNLYSAII----GDKVCMKIGDGS 394 (416)
Q Consensus 369 ~-------~~~~~--------~~~~~~~R----~~~~lvvinn~~ 394 (416)
. ++... +.+++|.. ++.++|++|...
T Consensus 904 ~~i~~~v~~~~~~g~~~~~~~~~~ia~~~~~~~~~~~~V~~Na~~ 948 (1111)
T TIGR02102 904 ALVDRKVTLITIPGQNEIEEEDLVVAYQIVATNGDIYAVFVNADD 948 (1111)
T ss_pred hhhcCcEEEECCCCCcccccCCcEEEEEEecCCCCeEEEEECCCC
Confidence 2 32221 45788865 356777788754
|
Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. In contrast, a glycogen debranching enzyme such GlgX, homologous to this family, can release glucose at alpha,1-6 linkages from glycogen first subjected to limit degradation by phosphorylase. Characterized members of this family include a surface-located pullulanase from Streptococcus pneumoniae (PubMed:11083842) and an extracellular bifunctional amylase/pullulanase with C-terminal pullulanase activity (PubMed:8798645). |
| >PRK13840 sucrose phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-49 Score=390.43 Aligned_cols=330 Identities=15% Similarity=0.154 Sum_probs=238.5
Q ss_pred eeEEEeeecCCCCCCcHHHHHhhhh-hHHHcCCCEEEeCCCC-CCC-CCCCcccccCCCCCCCCCCHHHHHHHHHHHHHC
Q 014892 29 EILFQGFNWESCKHDWWRNLERKVP-DISKSGFTSVWLPPAT-HSF-APEGYLPQNLYSLNSSYGSEHLLKALLHKMKQH 105 (416)
Q Consensus 29 ~~~~q~f~~~~~~~G~~~gi~~~Ld-yLk~LGv~~I~L~Pi~-~~~-~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~ 105 (416)
.|++-.|. ++-.+|||+||+++|| ||++| |++|||+|+| +++ +++||+|.||++|||+|||++||++|++
T Consensus 4 ~~~litY~-Ds~~~GdL~gl~~kLd~yL~~l-v~~vhllPff~psp~sD~GYdv~DY~~VDP~fGt~eDf~~L~~----- 76 (495)
T PRK13840 4 KVQLITYA-DRLGDGGLKSLTALLDGRLDGL-FGGVHILPFFYPIDGADAGFDPIDHTKVDPRLGDWDDVKALGK----- 76 (495)
T ss_pred ceEEEEec-cCCCCCCHhHHHHHHHHHHHHH-hCeEEECCCccCCCCCCCCCCCcChhhcCcccCCHHHHHHHHh-----
Confidence 56666666 4445699999999999 59999 9999999999 444 4799999999999999999999999995
Q ss_pred CCEEEEEEccccCcCCCCCCC--------Cccc----ccCC------CCCCCCCC------c---eecCCCCCCCCCCCC
Q 014892 106 KVRAMADIVINHRVGTTQGHG--------GKYN----RYDG------IPLSWDEH------A---VTSCTGGLGNGSTGD 158 (416)
Q Consensus 106 Gi~VilD~V~NH~~~~~~~~~--------~~~~----~f~~------~~~~~~~~------~---~~~~~~~~~~~~~~~ 158 (416)
||+||+|+|+||+|..|+|++ +.|. ++.. .+.+|..- . ...+.++........
T Consensus 77 giklmlDlV~NHtS~~h~WFqd~l~~~~~s~Y~D~fi~~d~~~~~~~~~~~~~~if~~~~g~~~~~~~~~~~~~~~~w~t 156 (495)
T PRK13840 77 THDIMADLIVNHMSAESPQFQDVLAKGEASEYWPMFLTKDKVFPDGATEEDLAGIYRPRPGLPFTTYTLADGKTRLVWTT 156 (495)
T ss_pred CCeEEEEECCCcCCCCcHHHHHHHHhCCCCCccCeEEECCCCCcCCCCCcccccccCCCCCCcccceEecCCCceEEecc
Confidence 999999999999999999853 2232 1111 01111100 0 000111111111122
Q ss_pred CCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCc-------------HHHHHHHHHhcCC--ceEEEccc
Q 014892 159 NFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYS-------------AKYVKEYIEGARP--IFSVGEYW 223 (416)
Q Consensus 159 ~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~-------------~~~~~~~~~~~~~--~~~vgE~~ 223 (416)
+...+||||++||+|+++|++++++|+ +.||||||+||+.++. .+||++++..++. ..+++|++
T Consensus 157 F~~~QpDLN~~NP~V~~~i~~il~fwl-~~GVDgfRLDAv~~l~K~~gt~c~~~pe~~~~l~~lr~~~~~~~~~ll~Ei~ 235 (495)
T PRK13840 157 FTPQQIDIDVHSAAGWEYLMSILDRFA-ASHVTLIRLDAAGYAIKKAGTSCFMIPETFEFIDRLAKEARARGMEVLVEIH 235 (495)
T ss_pred CCcccceeCCCCHHHHHHHHHHHHHHH-HCCCCEEEEechhhhhcCCCCCcCCChHHHHHHHHHHHHhhhcCCEEEEeCc
Confidence 346899999999999999999999999 8899999999997543 3488888776652 56889987
Q ss_pred CCCCCCCCCCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHh-cCchhhhhhhcCCCCCccccccCcceecccCC
Q 014892 224 DSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAV-KGQFWRLRDAQGKPPGVMGWWPSRAVTFLDNH 302 (416)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~fl~nH 302 (416)
.... . ..+ . .++.+++|||++...+..++ .++...+.+.+.. .|..++|||.||
T Consensus 236 ~y~~----------~--~~~---~---~~e~~~vYnF~Lp~ll~~aL~~~~~~~L~~~l~~-------~p~~~~n~L~~H 290 (495)
T PRK13840 236 SYYK----------T--QIE---I---AKKVDRVYDFALPPLILHTLFTGDVEALAHWLEI-------RPRNAVTVLDTH 290 (495)
T ss_pred cccC----------c--ccc---c---cccccEEecchhhHHHHHHHHhCCchHHHHHHHh-------CCCccEEeeecC
Confidence 5310 0 000 0 12578999999998888876 5665555544321 366668999999
Q ss_pred CCCCC----------CC--------------------------------------------CCCCChhhHHHHHHHHhcC
Q 014892 303 DTGST----------QA--------------------------------------------HWPFPSNHIMEGYAYILMH 328 (416)
Q Consensus 303 D~~R~----------~~--------------------------------------------~~~~~~~~~~~a~a~llt~ 328 (416)
|.-.+ .. .+..+.+++.+|.+++|++
T Consensus 291 DgIgl~d~~~~~~~~~gll~~~e~~~l~~~~~~~~~~~~~~~~~~~as~~~~Y~in~~~~~Al~~~d~r~lla~ai~~~~ 370 (495)
T PRK13840 291 DGIGIIDVGADDRGLAGLLPDEQIDNLVETIHANSHGESRQATGAAASNLDLYQVNCTYYDALGRNDQDYLAARAIQFFA 370 (495)
T ss_pred CCCCcccccccccccccCCCHHHHHHHHHHHHHhccCceeecCCcccccccchhhhccHHHHhcCCcHHHHHHHHHHHcC
Confidence 98665 11 0111234789999999999
Q ss_pred CCeeEEecCCcCCCc------------------------------hhHHHHHHHHHHHHHhCcccCCCCeEEEEecCCEE
Q 014892 329 PGIPSVFYDHFYDWG------------------------------DSIHNQIVKLMDVRRQQDIHSRSSIKILEAQSNLY 378 (416)
Q Consensus 329 pGiP~Iy~G~E~gw~------------------------------~~l~~~~~~Li~lR~~~~~l~~G~~~~~~~~~~~~ 378 (416)
||||.||||+|+|-. +++++.+++||++|+++|++ .|+++....+++.+
T Consensus 371 ~GiP~iY~~~ll~~~ND~~~~~~t~~~R~inR~~~~~~~~~~~l~~~v~~~l~~li~~R~~~~aF-~~~~~~~~~~~~~~ 449 (495)
T PRK13840 371 PGIPQVYYVGLLAGPNDMELLARTNVGRDINRHYYSTAEIDEALERPVVKALNALIRFRNEHPAF-DGAFSYAADGDTSL 449 (495)
T ss_pred CCcceeeechhhccCccHHHHHhcCCCcccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCccc-CceEEEecCCCCeE
Confidence 999999999998631 36889999999999999999 68888776676777
Q ss_pred EEEE---CCEEEEEEcC
Q 014892 379 SAII---GDKVCMKIGD 392 (416)
Q Consensus 379 ~~~R---~~~~lvvinn 392 (416)
+.++ .....+.+|.
T Consensus 450 ~~~~~~~~~~~~~~~~~ 466 (495)
T PRK13840 450 TLSWTAGDSSASLTLDF 466 (495)
T ss_pred EEEEecCCceEEEEEEc
Confidence 7765 2344555554
|
|
| >TIGR03852 sucrose_gtfA sucrose phosphorylase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-48 Score=385.40 Aligned_cols=333 Identities=17% Similarity=0.148 Sum_probs=238.3
Q ss_pred eeEEEeeecCCCC-CCcHHHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCC
Q 014892 29 EILFQGFNWESCK-HDWWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKV 107 (416)
Q Consensus 29 ~~~~q~f~~~~~~-~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi 107 (416)
.|++..|.-.... -|||+|++++ ||++ ||++|||+|+|+++++|||+|.||++|||+|||++||++|+++ |
T Consensus 2 ~v~lity~Ds~g~glgdl~g~l~~--yL~~-~v~~i~LlPffps~sD~GYdv~DY~~VDP~~Gt~~Df~~L~~~-----~ 73 (470)
T TIGR03852 2 KAMLITYADSLGKNLKELNKVLEN--YFKD-AVGGVHLLPFFPSTGDRGFAPMDYTEVDPAFGDWSDVEALSEK-----Y 73 (470)
T ss_pred CceEEEecCCCCCChhhHHHHHHH--HHHH-hCCEEEECCCCcCCCCCCcCchhhceeCcccCCHHHHHHHHHh-----h
Confidence 4566666643322 2688888888 9999 7999999999999999999999999999999999999999998 6
Q ss_pred EEEEEEccccCcCCCCCCC--------Ccccc-cC-------CC-CCCCCCCcee-----------cCCCCCCCCCCCCC
Q 014892 108 RAMADIVINHRVGTTQGHG--------GKYNR-YD-------GI-PLSWDEHAVT-----------SCTGGLGNGSTGDN 159 (416)
Q Consensus 108 ~VilD~V~NH~~~~~~~~~--------~~~~~-f~-------~~-~~~~~~~~~~-----------~~~~~~~~~~~~~~ 159 (416)
+||+|+|+||+|..|+|++ +.|.. |- +. +.+.+...+. .+.++........+
T Consensus 74 kvmlDlV~NHtS~~h~WFq~~~~~~~~s~y~d~fi~~~~~w~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~w~tF 153 (470)
T TIGR03852 74 YLMFDFMINHISRQSEYYQDFLEKKDNSKYKDLFIRYKDFWPNGRPTQEDVDLIYKRKDRAPYQEVTFADGSTEKVWNTF 153 (470)
T ss_pred hHHhhhcccccccchHHHHHHHhcCCCCCccceEEecccccCCCCccccccccccCCCCCCCCCceEEcCCCCeEEEccC
Confidence 9999999999999999753 23321 11 00 0000000000 01111111122233
Q ss_pred CCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCc-----------H---HHHHHHHHhcC--CceEEEccc
Q 014892 160 FHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYS-----------A---KYVKEYIEGAR--PIFSVGEYW 223 (416)
Q Consensus 160 ~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~-----------~---~~~~~~~~~~~--~~~~vgE~~ 223 (416)
...+||||+.||+|++++.+++++|+ +.||||||+||+.++. + ++++.+++-+. ...+++|++
T Consensus 154 ~~~QpDLN~~np~v~e~i~~il~fwl-~~GvdgfRLDAv~~l~K~~Gt~c~~l~pet~~~l~~~r~~~~~~~~~ll~E~~ 232 (470)
T TIGR03852 154 GEEQIDLDVTSETTKRFIRDNLENLA-EHGASIIRLDAFAYAVKKLGTNDFFVEPEIWELLDEVRDILAPTGAEILPEIH 232 (470)
T ss_pred CccccccCCCCHHHHHHHHHHHHHHH-HcCCCEEEEecchhhcccCCCCcccCChhHHHHHHHHHHHhccCCCEEEeHhh
Confidence 47899999999999999999999999 8999999999994433 2 35556655443 378999987
Q ss_pred CCCCCCCCCCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHh-cCchhhhhhhcCCCCCccccccCcceecccCC
Q 014892 224 DSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAV-KGQFWRLRDAQGKPPGVMGWWPSRAVTFLDNH 302 (416)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~fl~nH 302 (416)
..-.+ ....+++..++|+|++...+..++ .++...+.+.+. ..|...+||++||
T Consensus 233 ~~~~~------------------~~~~gde~~mvY~F~lppl~l~al~~~~~~~l~~wl~-------~~p~~~~nfL~sH 287 (470)
T TIGR03852 233 EHYTI------------------QFKIAEHGYYVYDFALPMLVLYSLYSGKTNRLADWLR-------KSPMKQFTTLDTH 287 (470)
T ss_pred hhccc------------------ccccccceeEEccCccchhhHHHhhccCHHHHHHHHH-------hCcccceEEeecC
Confidence 43111 001123567899999987777776 666666665543 2345557999999
Q ss_pred CCCCC------C-------------------C----------------------CCCCChhhHHHHHHHHhcCCCeeEEe
Q 014892 303 DTGST------Q-------------------A----------------------HWPFPSNHIMEGYAYILMHPGIPSVF 335 (416)
Q Consensus 303 D~~R~------~-------------------~----------------------~~~~~~~~~~~a~a~llt~pGiP~Iy 335 (416)
|.--+ . + .+..+.+++.+|.|++|++||||+||
T Consensus 288 Dgigl~~~~glL~~~ei~~l~~~~~~~g~~~s~~~~~~~~~~~~~Y~in~t~~~aL~~~~~r~~~a~ai~~~lpGiP~iY 367 (470)
T TIGR03852 288 DGIGVVDVKDLLTDEEIDYTSEELYKVGANVKKIYSTAAYNNLDIYQINCTYYSALGDDDQAYLLARAIQFFAPGIPQVY 367 (470)
T ss_pred CCCCCccccccCCHHHHHHHHHHHHhcCCCccccccccccCCcCceeeehhhHHHhCCCHHHHHHHHHHHHcCCCCceEE
Confidence 98321 0 0 12234567899999999999999999
Q ss_pred cCCcCCCc------------------------------hhHHHHHHHHHHHHHhCcccCC-CCeEEEEecCCEEEEEE--
Q 014892 336 YDHFYDWG------------------------------DSIHNQIVKLMDVRRQQDIHSR-SSIKILEAQSNLYSAII-- 382 (416)
Q Consensus 336 ~G~E~gw~------------------------------~~l~~~~~~Li~lR~~~~~l~~-G~~~~~~~~~~~~~~~R-- 382 (416)
||+|+|.. .++.+.+.+||++|+++|+++- |+++....++.++++.|
T Consensus 368 y~~llg~~nD~~~~~rt~~~R~Inr~~~~~~~i~~~l~~~v~~~L~~li~~R~~~~aF~~~g~~~~~~~~~~~~~~~r~~ 447 (470)
T TIGR03852 368 YVGLLAGKNDIELLEETKEGRNINRHYYTLEEIAEEVKRPVVAKLLNLLRFRNTSKAFDLDGSIDIETPSENQIEIVRTN 447 (470)
T ss_pred echhhcCCchHHHHHhcCCCCCCCCCCCCHHHHHHHHhhHHHHHHHHHHHHHhhCcccCCCCceEecCCCCcEEEEEEEc
Confidence 99998742 2567778889999999999985 99987777888999987
Q ss_pred ---CCEEEEEEcCCCC
Q 014892 383 ---GDKVCMKIGDGSW 395 (416)
Q Consensus 383 ---~~~~lvvinn~~~ 395 (416)
++++.+++|-++.
T Consensus 448 ~~~~~~~~~~~n~~~~ 463 (470)
T TIGR03852 448 KDGGNKAILTANLKTK 463 (470)
T ss_pred CCCCceEEEEEecCCC
Confidence 2345666665543
|
In the forward direction, this enzyme uses phosphate to cleave sucrose into D-fructose + alpha-D-glucose 1-phosphate. Characterized representatives from Streptococcus mutans and Bifidobacterium adolescentis represent well-separated branches of a molecular phylogenetic tree. In S. mutans, the region including this gene has been associated with neighboring transporter genes and multiple sugar metabolism. |
| >PLN02960 alpha-amylase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-47 Score=397.10 Aligned_cols=349 Identities=14% Similarity=0.152 Sum_probs=235.2
Q ss_pred CceeEEEeeecCCCCC---CcHHHHHhh-hhhHHHcCCCEEEeCCCCCCC--CCCCcccccCCCCCCCCCCHHHHHHHHH
Q 014892 27 GREILFQGFNWESCKH---DWWRNLERK-VPDISKSGFTSVWLPPATHSF--APEGYLPQNLYSLNSSYGSEHLLKALLH 100 (416)
Q Consensus 27 ~~~~~~q~f~~~~~~~---G~~~gi~~~-LdyLk~LGv~~I~L~Pi~~~~--~~~GY~~~d~~~id~~~Gt~~d~~~Lv~ 100 (416)
.+.+||++....+..+ |+|++++++ |||||+||||+||||||++++ .+|||++++||+|+++|||++|||+||+
T Consensus 394 ~~~vIYElHvg~~~~e~~~gtf~~~~e~~LdYLk~LGvt~IeLmPv~e~~~~~swGY~~~~yfa~~~~yGtp~dfk~LVd 473 (897)
T PLN02960 394 KSLRIYECHVGISGSEPKISSFKEFTQKVLPHVKKAGYNAIQLIGVQEHKDYSSVGYKVTNFFAVSSRFGTPDDFKRLVD 473 (897)
T ss_pred CCcEEEEEecccccCCCCCCCHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCCCCcccCCCcccccCCHHHHHHHHH
Confidence 4578999999876554 599999976 999999999999999999876 4699999999999999999999999999
Q ss_pred HHHHCCCEEEEEEccccCcCCCCCCCCcccccCCCC-CCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHH
Q 014892 101 KMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIP-LSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIA 179 (416)
Q Consensus 101 ~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~ 179 (416)
+||++||+||||+|+||++.+++..- ..|++.. ..+... ..+. .. ..+.+.+|+.+|+||++|++
T Consensus 474 ~aH~~GI~VILDvV~NH~~~d~~~~L---~~FDG~~~~Yf~~~-----~~g~-----~~-~WG~~~fNy~~~eVr~fLls 539 (897)
T PLN02960 474 EAHGLGLLVFLDIVHSYAAADEMVGL---SLFDGSNDCYFHSG-----KRGH-----HK-RWGTRMFKYGDHEVLHFLLS 539 (897)
T ss_pred HHHHCCCEEEEEecccccCCccccch---hhcCCCccceeecC-----CCCc-----cC-CCCCcccCCCCHHHHHHHHH
Confidence 99999999999999999999753211 1122211 011100 0000 01 12346789999999999999
Q ss_pred HHHHHHHhcCCCeEEecccCCC-------------------------cHHHHHHHHHhcC---C-ceEEEcccCCCCCCC
Q 014892 180 WLRWLRNTVGFQDFRFDFARGY-------------------------SAKYVKEYIEGAR---P-IFSVGEYWDSCNYNS 230 (416)
Q Consensus 180 ~~~~w~~~~gvDGfRlD~a~~~-------------------------~~~~~~~~~~~~~---~-~~~vgE~~~~~~~~~ 230 (416)
++++|+++|||||||+|++..| ...|++++.+.++ | .++|||-....+
T Consensus 540 na~yWl~EyhIDGfR~DAV~sMlY~d~g~~~~~G~~~~~~n~~~d~~Ai~fL~~lN~~v~~~~P~vilIAEdss~~P--- 616 (897)
T PLN02960 540 NLNWWVTEYRVDGFQFHSLGSMLYTHNGFASFTGDLDEYCNQYVDRDALIYLILANEMLHQLHPNIITIAEDATFYP--- 616 (897)
T ss_pred HHHHHHHHHCCCceeecccceeeeeccCccccCCcccccCCccCCchHHHHHHHHHHHHHhhCCCeEEEEECCCCCC---
Confidence 9999999999999999998652 1247777766553 4 789999654311
Q ss_pred CCCCCccchhhHhHhhhhccC-CCcccccCchhhHHHHHHhcCch---hhhhhhcCCCCCcc--ccccCcceecccCCCC
Q 014892 231 HGLDYNQDSHRQRIINWIDGT-GQLSAAFDFTTKGILQEAVKGQF---WRLRDAQGKPPGVM--GWWPSRAVTFLDNHDT 304 (416)
Q Consensus 231 ~~~~~~~~~~~~~l~~~~~~~-~~~~~~fdf~~~~~l~~~~~~~~---~~~~~~~~~~~~~~--~~~p~~~~~fl~nHD~ 304 (416)
.|..-...+ -+++...++.....+..++.... +....... .+. ...+.+.+.|++|||+
T Consensus 617 ------------~vt~P~~~GGLGFDYkwnmG~~~d~l~~l~~~~~r~~~~~~l~~---s~~~~~~~~~~~v~Y~EnHDQ 681 (897)
T PLN02960 617 ------------GLCEPTSQGGLGFDYYVNLSPSEMWLSLLENVPDQEWSMSKIVS---TLVKNKENADKMLSYAENHNQ 681 (897)
T ss_pred ------------CccccCCCCCCCcccccCCCcHHHHHHHHHhCcCCCCChhccEe---eeccCcCCcceEEEEecCcCc
Confidence 111111111 12444444444444444442211 11111110 111 1234577999999999
Q ss_pred C-----CCCCCCCCC-------hh----------hHHHHHHHHhcCCCeeEEecCCcCCC--------------------
Q 014892 305 G-----STQAHWPFP-------SN----------HIMEGYAYILMHPGIPSVFYDHFYDW-------------------- 342 (416)
Q Consensus 305 ~-----R~~~~~~~~-------~~----------~~~~a~a~llt~pGiP~Iy~G~E~gw-------------------- 342 (416)
. ++...+... .. .+..+++++++ ||+|++|||+|||-
T Consensus 682 Vv~Gkrsl~~rL~g~~~~k~~~~~~~~lRa~al~~~~rllt~~~~-Pg~pLlFMG~EFGh~e~~~~PdP~n~~tf~~s~L 760 (897)
T PLN02960 682 SISGGKSFAEILLGKNKESSPAVKELLLRGVSLHKMIRLITFTLG-GSAYLNFMGNEFGHPERVEFPRASNNFSFSLANR 760 (897)
T ss_pred cccCcccHHHHCCCchhhhhcccChhhhhhhhHHHHHHHHHHHhC-CCCCEeeCccccCChhhhhCcCCCCccccccccC
Confidence 2 222222111 01 11123455554 89999999999752
Q ss_pred --c-------hhHHHHHHHHHHHHHhCcccCCCCeEEEEec--CCEEEEEECCEEEEEEcCCCC---------CCCCCCc
Q 014892 343 --G-------DSIHNQIVKLMDVRRQQDIHSRSSIKILEAQ--SNLYSAIIGDKVCMKIGDGSW---------CPAGKEW 402 (416)
Q Consensus 343 --~-------~~l~~~~~~Li~lR~~~~~l~~G~~~~~~~~--~~~~~~~R~~~~lvvinn~~~---------~~~~~~~ 402 (416)
+ ..+.+++|+|++||+++|+|+.|.......+ +.+++|.|+ .+++|+|.+.. .|..|.|
T Consensus 761 dW~Ll~~~~h~~l~~f~rdL~~Lr~~~paL~~g~~~i~~~d~~~~Viaf~R~-~llvV~NFsp~~~~~~Y~vgvP~~G~y 839 (897)
T PLN02960 761 RWDLLEDGVHAHLFSFDKALMALDEKYLILSRGLPNIHHVNDTSMVISFTRG-PLLFAFNFHPTNSYEEYEVGVEEAGEY 839 (897)
T ss_pred CcccccChhHHHHHHHHHHHHHHHhcChhhcCCcceeeeecCCCCEEEEEeC-CeEEEEeCCCCCcCcCceECCCCCCcE
Confidence 1 2588899999999999999998876655443 469999995 58888898642 1345789
Q ss_pred EEeeeCC
Q 014892 403 TLATSGH 409 (416)
Q Consensus 403 ~~~ls~~ 409 (416)
+.+|+..
T Consensus 840 ~eilNSD 846 (897)
T PLN02960 840 ELILNTD 846 (897)
T ss_pred EEEEeCc
Confidence 8888643
|
|
| >PRK14705 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-47 Score=414.13 Aligned_cols=353 Identities=15% Similarity=0.143 Sum_probs=239.6
Q ss_pred ceeEEEeeecCCCCCCcHHHHHhh-hhhHHHcCCCEEEeCCCCCCC--CCCCcccccCCCCCCCCCCHHHHHHHHHHHHH
Q 014892 28 REILFQGFNWESCKHDWWRNLERK-VPDISKSGFTSVWLPPATHSF--APEGYLPQNLYSLNSSYGSEHLLKALLHKMKQ 104 (416)
Q Consensus 28 ~~~~~q~f~~~~~~~G~~~gi~~~-LdyLk~LGv~~I~L~Pi~~~~--~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~ 104 (416)
..+||++-..+++..++|++++++ |||||+||||+||||||++++ .+|||++++||+++++|||++|||+||++||+
T Consensus 747 p~~IYEvHvgsf~~~~~~~~l~~~lldYlk~LGvt~IeLmPv~e~p~~~swGY~~~~y~ap~~ryGt~~dfk~lVd~~H~ 826 (1224)
T PRK14705 747 PMSVYEVHLGSWRLGLGYRELAKELVDYVKWLGFTHVEFMPVAEHPFGGSWGYQVTSYFAPTSRFGHPDEFRFLVDSLHQ 826 (1224)
T ss_pred CcEEEEEEecccccCCchHHHHHHHHHHHHHhCCCEEEECccccCCCCCCCCCCccccCCcCcccCCHHHHHHHHHHHHH
Confidence 468999999888888999999988 599999999999999999876 57999999999999999999999999999999
Q ss_pred CCCEEEEEEccccCcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHH
Q 014892 105 HKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWL 184 (416)
Q Consensus 105 ~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w 184 (416)
+||+||||+|+||++.+.... ..|++.+...+. ++.. .....|. ...+|+.+++||++|++++++|
T Consensus 827 ~GI~VILD~V~nH~~~d~~~l----~~fdg~~~y~~~-------d~~~--g~~~~Wg-~~~fn~~~~eVr~fli~~a~~W 892 (1224)
T PRK14705 827 AGIGVLLDWVPAHFPKDSWAL----AQFDGQPLYEHA-------DPAL--GEHPDWG-TLIFDFGRTEVRNFLVANALYW 892 (1224)
T ss_pred CCCEEEEEeccccCCcchhhh----hhcCCCcccccC-------Cccc--CCCCCCC-CceecCCCHHHHHHHHHHHHHH
Confidence 999999999999998764311 112221111111 1100 0011122 3469999999999999999999
Q ss_pred HHhcCCCeEEecccCCC------------------------cHHHHHHHHHhcC---C-ceEEEcccCCCCCCCCCCCCc
Q 014892 185 RNTVGFQDFRFDFARGY------------------------SAKYVKEYIEGAR---P-IFSVGEYWDSCNYNSHGLDYN 236 (416)
Q Consensus 185 ~~~~gvDGfRlD~a~~~------------------------~~~~~~~~~~~~~---~-~~~vgE~~~~~~~~~~~~~~~ 236 (416)
+++|||||||+|++..| ..+||+++.+.++ | .++|||.+...+
T Consensus 893 l~eyhiDGfR~Dav~~mly~Dysr~~g~w~pn~~gg~en~~ai~fl~~ln~~v~~~~p~~~~IAEest~~p--------- 963 (1224)
T PRK14705 893 LDEFHIDGLRVDAVASMLYLDYSREEGQWRPNRFGGRENLEAISFLQEVNATVYKTHPGAVMIAEESTAFP--------- 963 (1224)
T ss_pred HHHhCCCcEEEeehhhhhhcccccccccccccccCCccChHHHHHHHHHHHHHHHHCCCeEEEEEcCCCCc---------
Confidence 99999999999998776 3569999887764 4 789999665311
Q ss_pred cchhhHhHhhhhcc-CCCcccccCchhhHHHHHHhc-CchhhhhhhcCCCCCccccccCcceecccCCCCCC-C----CC
Q 014892 237 QDSHRQRIINWIDG-TGQLSAAFDFTTKGILQEAVK-GQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGS-T----QA 309 (416)
Q Consensus 237 ~~~~~~~l~~~~~~-~~~~~~~fdf~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~fl~nHD~~R-~----~~ 309 (416)
.+..-... +-+++..++...+..+.+.+. ....+......-..++. +.....+.+..|||+.. . ..
T Consensus 964 ------~vt~p~~~GGlGFd~kWnmgwmhd~l~Y~~~dp~~r~~~~~~ltf~~~-ya~~e~fvl~~SHDevvhgk~sl~~ 1036 (1224)
T PRK14705 964 ------GVTAPTSHGGLGFGLKWNMGWMHDSLKYASEDPINRKWHHGTITFSLV-YAFTENFLLPISHDEVVHGKGSMLR 1036 (1224)
T ss_pred ------CccccccCCCccCCcEecchhhHHHHHHhhhCcchhhcccchHHHHHH-HHhhcCEecccccccccccchhHHH
Confidence 01111111 112334444444443333332 22211111000000000 00112233456899853 1 11
Q ss_pred CCCCCh----hhHHHHHHHHhcCCCeeEEecCCcCC------------Cc-------hhHHHHHHHHHHHHHhCcccCCC
Q 014892 310 HWPFPS----NHIMEGYAYILMHPGIPSVFYDHFYD------------WG-------DSIHNQIVKLMDVRRQQDIHSRS 366 (416)
Q Consensus 310 ~~~~~~----~~~~~a~a~llt~pGiP~Iy~G~E~g------------w~-------~~l~~~~~~Li~lR~~~~~l~~G 366 (416)
....+. ..+++++++++++||+|+||+|+||| |. ..+..++|+|++||+++|+|..+
T Consensus 1037 km~Gd~~~k~a~lR~~~a~~~~~PGk~LlFMG~Efgq~~ew~~~~~LdW~ll~~~~h~~~~~~~rdLn~ly~~~paL~~~ 1116 (1224)
T PRK14705 1037 KMPGDRWQQLANLRAFLAYQWAHPGKQLIFMGTEFGQEAEWSEQHGLDWFLADIPAHRGIQLLTKDLNELYTSTPALYQR 1116 (1224)
T ss_pred hCCCcHHHHHHHHHHHHHHHHhcCCcCEEECccccCCCCCccccccCCCcccCChhhHHHHHHHHHHHHHHhcChhhhcc
Confidence 222221 24688999999999999999999986 22 25788999999999999999754
Q ss_pred C-----eEEEEe---cCCEEEEEE----CCEEEEEEcCCCC--------CCCCCCcEEeeeCCc
Q 014892 367 S-----IKILEA---QSNLYSAII----GDKVCMKIGDGSW--------CPAGKEWTLATSGHK 410 (416)
Q Consensus 367 ~-----~~~~~~---~~~~~~~~R----~~~~lvvinn~~~--------~~~~~~~~~~ls~~~ 410 (416)
+ ++.+.. ++++++|.| ++.+++|+|.+.. .|..|.|+.+++...
T Consensus 1117 d~~~~gf~wi~~~d~~~~vlaf~R~~~~~~~vlvv~Nftp~~~~~y~igvp~~G~y~eilnsd~ 1180 (1224)
T PRK14705 1117 DNEPGGFQWINGGDADRNVLSFIRWDGDGNPLVCAINFSGGPHKGYTLGVPAAGAWTEVLNTDH 1180 (1224)
T ss_pred CCCCCceEEeecCCCCCcEEEEEEeCCCCCEEEEEEcCCCCCccCceECCCCCCeEEEEEeCch
Confidence 3 455532 356999988 2457888888542 245678998887543
|
|
| >PLN02447 1,4-alpha-glucan-branching enzyme | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-44 Score=372.70 Aligned_cols=350 Identities=15% Similarity=0.198 Sum_probs=235.4
Q ss_pred CceeEEEeeecCCCCC---CcHHHHH-hhhhhHHHcCCCEEEeCCCCCCC--CCCCcccccCCCCCCCCCCHHHHHHHHH
Q 014892 27 GREILFQGFNWESCKH---DWWRNLE-RKVPDISKSGFTSVWLPPATHSF--APEGYLPQNLYSLNSSYGSEHLLKALLH 100 (416)
Q Consensus 27 ~~~~~~q~f~~~~~~~---G~~~gi~-~~LdyLk~LGv~~I~L~Pi~~~~--~~~GY~~~d~~~id~~~Gt~~d~~~Lv~ 100 (416)
.+.+||.+-...+..+ |+++++. ++|+|||+||||+||||||++++ .+|||+++|||+++++|||++|||+||+
T Consensus 228 ~~~~IYE~Hvg~~~~~~~~gty~~~~~~~L~ylk~LG~t~I~LmPi~e~~~~~~wGY~~~~~fa~~~~~Gtp~dlk~LVd 307 (758)
T PLN02447 228 AALRIYEAHVGMSSEEPKVNSYREFADDVLPRIKALGYNAVQLMAIQEHAYYGSFGYHVTNFFAVSSRSGTPEDLKYLID 307 (758)
T ss_pred CCCEEEEEeCCcccCCCCCCCHHHHHHHHHHHHHHcCCCEEEECCccccCCCCCCCcCcccCcccccccCCHHHHHHHHH
Confidence 4568999888765443 6999975 56999999999999999999987 4799999999999999999999999999
Q ss_pred HHHHCCCEEEEEEccccCcCCCCCCCCcccccCCCC-CCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHH
Q 014892 101 KMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIP-LSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIA 179 (416)
Q Consensus 101 ~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~ 179 (416)
+||++||+||||+|+||++.++.. ....|++.. ..|+... .+. . ...+...+|+.+++||++|++
T Consensus 308 ~aH~~GI~VilDvV~nH~~~~~~~---gl~~fDg~~~~Yf~~~~-----~g~-----~-~~w~~~~~N~~~~eVr~fLl~ 373 (758)
T PLN02447 308 KAHSLGLRVLMDVVHSHASKNTLD---GLNGFDGTDGSYFHSGP-----RGY-----H-WLWDSRLFNYGNWEVLRFLLS 373 (758)
T ss_pred HHHHCCCEEEEEeccccccccccc---cccccCCCCccccccCC-----CCC-----c-CcCCCceecCCCHHHHHHHHH
Confidence 999999999999999999986531 011222211 1111110 000 0 111234699999999999999
Q ss_pred HHHHHHHhcCCCeEEecccCCCc--------------------------HHHHHHHHHhcC---C-ceEEEcccCCCCCC
Q 014892 180 WLRWLRNTVGFQDFRFDFARGYS--------------------------AKYVKEYIEGAR---P-IFSVGEYWDSCNYN 229 (416)
Q Consensus 180 ~~~~w~~~~gvDGfRlD~a~~~~--------------------------~~~~~~~~~~~~---~-~~~vgE~~~~~~~~ 229 (416)
++++|+++|||||||+|+|++|- ..|++.+.+.++ | .++|||.+.+.+
T Consensus 374 ~~~~Wl~ey~IDGfRfDaV~smlY~~hg~~~~f~~~~~~~~g~~~d~~a~~fL~~~N~~i~~~~p~~~~IAEd~s~~p-- 451 (758)
T PLN02447 374 NLRWWLEEYKFDGFRFDGVTSMLYHHHGLQMAFTGNYNEYFGMATDVDAVVYLMLANDLLHGLYPEAVTIAEDVSGMP-- 451 (758)
T ss_pred HHHHHHHHhCcccccccchhhhhccccCcccccccCcccccCCccChHHHHHHHHHHHHHHHhCCCeEEEEEcCCCCC--
Confidence 99999999999999999998762 236666665543 4 788999765421
Q ss_pred CCCCCCccchhhHhHhhhhccCC-CcccccCchhhHHHHHHhcCc---hhhhhhhcCCCCCccc-cccCcceecccCCCC
Q 014892 230 SHGLDYNQDSHRQRIINWIDGTG-QLSAAFDFTTKGILQEAVKGQ---FWRLRDAQGKPPGVMG-WWPSRAVTFLDNHDT 304 (416)
Q Consensus 230 ~~~~~~~~~~~~~~l~~~~~~~~-~~~~~fdf~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~-~~p~~~~~fl~nHD~ 304 (416)
.+......+| +++.-++........+.++.. .+.+-.... .+.. ....+.|.|.+|||+
T Consensus 452 -------------~l~~p~~~GGlGFDykw~Mg~~~~~l~~l~~~~d~~~~~~~l~~---sl~~r~~~E~~I~y~eSHDe 515 (758)
T PLN02447 452 -------------TLCRPVQEGGVGFDYRLAMAIPDKWIELLKEKRDEDWSMGDIVH---TLTNRRYTEKCVAYAESHDQ 515 (758)
T ss_pred -------------CccccCCCCcCCcceEECCccchHHHHHHhhCCCcccCHHHHHH---HHhcccccCceEeccCCcCe
Confidence 1111111111 222333333344444444221 111111100 1111 233477889999999
Q ss_pred CCCC--C------------CCCCCh------hh----HHHHHHHHhcCCCe-eEEecCCcCCC-----------------
Q 014892 305 GSTQ--A------------HWPFPS------NH----IMEGYAYILMHPGI-PSVFYDHFYDW----------------- 342 (416)
Q Consensus 305 ~R~~--~------------~~~~~~------~~----~~~a~a~llt~pGi-P~Iy~G~E~gw----------------- 342 (416)
.... + .+.... .| .|+..++++++||. +++|+|.|||-
T Consensus 516 vv~Gkksl~~~l~d~~my~~m~~~~~~~~~~~R~~~lhkmirl~~~~~pG~g~L~FMGnEFg~~ew~Dfpr~~n~ws~~~ 595 (758)
T PLN02447 516 ALVGDKTIAFWLMDKEMYDGMSTLTPATPVVDRGIALHKMIRLITMALGGEGYLNFMGNEFGHPEWIDFPREGNGWSYDK 595 (758)
T ss_pred eecCcchhHhhhcchhhhhcCCCChhhhhhHHHHHHHHHHHHHHHHhCCCCcceeecccccCCchhccCcccccccCccc
Confidence 7531 1 111100 11 25566789999999 79999999862
Q ss_pred -----c---------hhHHHHHHHHHHHHHhCcccCCCCeEEEE--ecCCEEEEEECCEEEEEEcCCCC---------CC
Q 014892 343 -----G---------DSIHNQIVKLMDVRRQQDIHSRSSIKILE--AQSNLYSAIIGDKVCMKIGDGSW---------CP 397 (416)
Q Consensus 343 -----~---------~~l~~~~~~Li~lR~~~~~l~~G~~~~~~--~~~~~~~~~R~~~~lvvinn~~~---------~~ 397 (416)
+ +.+.++.|.|++|++++|+|..|...+.. .++.|++|.|++ +|+|+|.... .|
T Consensus 596 ~~~~W~L~d~~~l~~~~l~~f~~~L~~l~~~~~~L~~~~~~i~~~d~~~~Viaf~R~~-ll~V~NF~p~~s~~~Y~igvp 674 (758)
T PLN02447 596 CRRRWDLADADHLRYKFLNAFDRAMMHLDEKYGFLTSEHQYVSRKDEGDKVIVFERGD-LVFVFNFHPTNSYSDYRVGCD 674 (758)
T ss_pred ccCCccccCCCchhhhHHHHHHHHHHHHHhcCccccCCCceeeeecCCCCEEEEEeCC-eEEEEeCCCCCCCCCcEECCC
Confidence 1 14678999999999999999876544433 335799999974 8888888642 24
Q ss_pred CCCCcEEeeeCC
Q 014892 398 AGKEWTLATSGH 409 (416)
Q Consensus 398 ~~~~~~~~ls~~ 409 (416)
..|.|+.+|+..
T Consensus 675 ~~G~y~~ilnSD 686 (758)
T PLN02447 675 KPGKYKIVLDSD 686 (758)
T ss_pred CCCeEEEEECCC
Confidence 567888888643
|
|
| >COG0366 AmyA Glycosidases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-45 Score=375.29 Aligned_cols=355 Identities=17% Similarity=0.235 Sum_probs=222.9
Q ss_pred eeEEEeeecCCCC-----------CCcHHHHHhhhhhHHHcCCCEEEeCCCCCC-CCCCCcccccCCCCCCCCCCHHHHH
Q 014892 29 EILFQGFNWESCK-----------HDWWRNLERKVPDISKSGFTSVWLPPATHS-FAPEGYLPQNLYSLNSSYGSEHLLK 96 (416)
Q Consensus 29 ~~~~q~f~~~~~~-----------~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~-~~~~GY~~~d~~~id~~~Gt~~d~~ 96 (416)
++|||+|-..+.. .|||+||+++||||++|||++|||+||+++ ..+|||++.||+.|+|+|||++||+
T Consensus 1 ~viyqi~~~~f~d~~~~~~~~~~G~Gdl~Gi~~~LdYl~~LGv~aiwl~Pi~~s~~~~~gY~~~Dy~~id~~~Gt~~d~~ 80 (505)
T COG0366 1 AVIYQIYPDRFADSNGSNGPDYDGGGDLKGITEKLDYLKELGVDAIWLSPIFESPQADHGYDVSDYTKVDPHFGTEEDFK 80 (505)
T ss_pred CcEEEEechhhcCCCCCCccCCCCcccHHhHHHhhhHHHHhCCCEEEeCCCCCCCccCCCccccchhhcCcccCCHHHHH
Confidence 3688888865531 289999999999999999999999999999 6799999999999999999999999
Q ss_pred HHHHHHHHCCCEEEEEEccccCcCCCCCCCCcccccC----CCCCCCCCCc---------eecC-CCCCC-----CCCCC
Q 014892 97 ALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYD----GIPLSWDEHA---------VTSC-TGGLG-----NGSTG 157 (416)
Q Consensus 97 ~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~----~~~~~~~~~~---------~~~~-~~~~~-----~~~~~ 157 (416)
+||++||++||+||+|+|+||++..|+|+........ ...+.|.+.. .... .+.+. .....
T Consensus 81 ~li~~~H~~gi~vi~D~V~NH~s~~~~~f~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (505)
T COG0366 81 ELVEEAHKRGIKVILDLVFNHTSDEHPWFKEARSSKPNPKRSDYYIWRDPDPDGTPPNNWFSVFGGDAWTWGNTGEYYLH 160 (505)
T ss_pred HHHHHHHHCCCEEEEEeccCcCCCccHHHHHHhcCCCCcccCCCceEccCcccCCCCCcchhhcCCCCCCcCCCCceEEE
Confidence 9999999999999999999999999986431110000 0011122110 0000 01111 11122
Q ss_pred CCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcH-----------HHHHHHHHhcCC----ceEEEcc
Q 014892 158 DNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSA-----------KYVKEYIEGARP----IFSVGEY 222 (416)
Q Consensus 158 ~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~-----------~~~~~~~~~~~~----~~~vgE~ 222 (416)
.....+||||+.||+||+.+.+++++|+ ++||||||+|+++++++ .++..+.+.+++ .+..+|.
T Consensus 161 ~~~~~~~dln~~n~~v~~~~~~~~~~W~-~~gvDGfRlDa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (505)
T COG0366 161 LFSSEQPDLNWENPEVREELLDVVKFWL-DKGVDGFRLDAAKHISKDFGLPPSEENLTFLEEIHEYLREENPDVLIYGEA 239 (505)
T ss_pred ecCCCCCCcCCCCHHHHHHHHHHHHHHH-HcCCCeEEeccHhhhccccCCCCcccccccHHHHHHHHHHHHHHHHhcCcc
Confidence 2347889999999999999999999999 69999999999999998 556666555431 1111222
Q ss_pred cCCCC-CCCCCCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHh-cCch---hhhhhhcCCCCCccccccCccee
Q 014892 223 WDSCN-YNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAV-KGQF---WRLRDAQGKPPGVMGWWPSRAVT 297 (416)
Q Consensus 223 ~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~-~~~~---~~~~~~~~~~~~~~~~~p~~~~~ 297 (416)
+.... +......+. ..............|++.....-.... .... ......+.. ...........
T Consensus 240 ~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 309 (505)
T COG0366 240 ITDVGEAPGAVKEDF-------ADNTSFTNPELSMLFDFSHVGLDFEALAPLDAEELKEILADWPL---AVNLNDGWNNL 309 (505)
T ss_pred eeeeeccccccchhh-------hhccchhhhhHhhccccccccccccccCcccHHHHHHHHHHHHh---hhccccCchhh
Confidence 22110 000000000 000000000122333332211000000 0001 111111110 00011122345
Q ss_pred cccCCCCCCCCCCCCCCh----hhHHHHHHHHhcCCCeeEEecCCcCC--------------------------------
Q 014892 298 FLDNHDTGSTQAHWPFPS----NHIMEGYAYILMHPGIPSVFYDHFYD-------------------------------- 341 (416)
Q Consensus 298 fl~nHD~~R~~~~~~~~~----~~~~~a~a~llt~pGiP~Iy~G~E~g-------------------------------- 341 (416)
|.+|||++|+.+....+. ...+++.++++++||+|+||||+|.|
T Consensus 310 ~~~~hD~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~iy~G~e~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 389 (505)
T COG0366 310 FLSNHDQPRLLSRFGDDVGGRDASAKLLAALLFLLPGTPFIYYGDELGLTNFKDPPIKYYDDVELDSIILLSRDGCRTPM 389 (505)
T ss_pred hhhhcCccceeeeccCCccchHHHHHHHHHHHHhCCCCcEEecccccCCCCCCCcchhhhchhhhhhhhhccccCCCCCc
Confidence 799999999988775443 56788888899999999999999853
Q ss_pred -Cc------------------------------------hhHHHHHHHHHHHHHhC-cccCCCCeEEEEe-cC-CEEEEE
Q 014892 342 -WG------------------------------------DSIHNQIVKLMDVRRQQ-DIHSRSSIKILEA-QS-NLYSAI 381 (416)
Q Consensus 342 -w~------------------------------------~~l~~~~~~Li~lR~~~-~~l~~G~~~~~~~-~~-~~~~~~ 381 (416)
|+ .+++.++++|+++|+++ +.+..|....... ++ .+++|.
T Consensus 390 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~~~~~~~l~~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~ 469 (505)
T COG0366 390 PWDENGLNAGFTGGKPWLSVNPNDLLGINVEAQLADELPESLFNFYRRLIALRKQHSALLANGEDFVLLADDDPSLLAFL 469 (505)
T ss_pred CCCCCCCCCCccCCCcCcccChhhhhhhhHHHHhcccCcccHHHHHHHHHHHHHhhhhhhcCcccceecCCCCceEEEEe
Confidence 11 15788999999999999 5556674433333 33 588998
Q ss_pred E--CCE-EEEEEcCCC
Q 014892 382 I--GDK-VCMKIGDGS 394 (416)
Q Consensus 382 R--~~~-~lvvinn~~ 394 (416)
| .++ +++++|.+.
T Consensus 470 ~~~~~~~~~~~~n~~~ 485 (505)
T COG0366 470 RESGGETLLVVNNLSE 485 (505)
T ss_pred cccCCceEEEEEcCCC
Confidence 8 333 455555543
|
|
| >TIGR02103 pullul_strch alpha-1,6-glucosidases, pullulanase-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-43 Score=371.61 Aligned_cols=355 Identities=15% Similarity=0.236 Sum_probs=234.4
Q ss_pred ccCceeEEEeeecCCCC---------CCcHHHHHhh-------hhhHHHcCCCEEEeCCCCCCC----------------
Q 014892 25 RNGREILFQGFNWESCK---------HDWWRNLERK-------VPDISKSGFTSVWLPPATHSF---------------- 72 (416)
Q Consensus 25 ~~~~~~~~q~f~~~~~~---------~G~~~gi~~~-------LdyLk~LGv~~I~L~Pi~~~~---------------- 72 (416)
...+.+||.+=.++++. .|+|.|++++ |+||++||||+|+|||+|+..
T Consensus 249 ~~~d~iIYElHVRDFS~~d~s~~~~~rGtYla~tE~~t~gi~hLk~L~eLGVThVeLLPv~df~tvdE~~~~~~~~~~~~ 328 (898)
T TIGR02103 249 SFADMVLYELHIRDFSANDESVPAELRGKYLAFTAADSAGVQHLKKLADAGVTHLHLLPTFDIATVNEEKEKVADIQQPF 328 (898)
T ss_pred CCcccEEEEEeccccccCCCCCCcCcCceeeehhccchhhhHHHHHHHhCCCcEEEEcChhhcCccccccccccccccch
Confidence 34678999999888752 4899999886 666778899999999998642
Q ss_pred -----------------------------------------------C-CCCcccccCCCCCCCCCCH-------HHHHH
Q 014892 73 -----------------------------------------------A-PEGYLPQNLYSLNSSYGSE-------HLLKA 97 (416)
Q Consensus 73 -----------------------------------------------~-~~GY~~~d~~~id~~~Gt~-------~d~~~ 97 (416)
+ +|||+|..|++++..|++. +|||+
T Consensus 329 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~v~~~~~~d~yNWGYDP~~y~aPegSYatdp~g~~Ri~Efk~ 408 (898)
T TIGR02103 329 SKLCELNPDSKSSEFAGYCDSGSQLKQNDSKDNPEVQALNTLVRNLDSYNWGYDPFHYTVPEGSYATDPEGPARIKEFRE 408 (898)
T ss_pred hhhhccccccccccccccccccccccccccccchhhhhhhhhhccCCCCCCCCCCcccCCcChhhccCCCCchHHHHHHH
Confidence 1 5999999999999999883 69999
Q ss_pred HHHHHHHCCCEEEEEEccccCcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHH
Q 014892 98 LLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDI 177 (416)
Q Consensus 98 Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l 177 (416)
||++||++||+||||+|+||++..++...+.+....+ ..|+.. ..++... ......+++.++|+||++|
T Consensus 409 mV~alH~~Gi~VIlDVVyNHt~~~g~~~~s~ld~~~P--~YY~r~----~~~G~~~-----n~~~~~d~a~e~~~Vrk~i 477 (898)
T TIGR02103 409 MVQALNKTGLNVVMDVVYNHTNASGPNDRSVLDKIVP--GYYHRL----NEDGGVE-----NSTCCSNTATEHRMMAKLI 477 (898)
T ss_pred HHHHHHHCCCEEEEEeecccccccCccCcccccccCc--HhhEee----CCCCCee-----cCCCCcCCCCCCHHHHHHH
Confidence 9999999999999999999999987654332221110 011110 0011111 1122357899999999999
Q ss_pred HHHHHHHHHhcCCCeEEecccCCCcHHHHHHHHHhcC---C-ceEEEcccCCCCCC-------CC-------CCCCccch
Q 014892 178 IAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGAR---P-IFSVGEYWDSCNYN-------SH-------GLDYNQDS 239 (416)
Q Consensus 178 ~~~~~~w~~~~gvDGfRlD~a~~~~~~~~~~~~~~~~---~-~~~vgE~~~~~~~~-------~~-------~~~~~~~~ 239 (416)
++++++|+++|||||||||++++++.+||+++.++++ | .+++||.|+..... .. ...++++.
T Consensus 478 iDsl~~W~~ey~VDGFRfDlm~~~~~~f~~~~~~~l~~i~pdi~l~GEgW~~~~~~~~~~~~~a~~~n~~~~~ig~FnD~ 557 (898)
T TIGR02103 478 VDSLVVWAKDYKVDGFRFDLMGHHPKAQMLAAREAIKALTPEIYFYGEGWDFGEVANNRRFINATQLNLAGTGIGTFSDR 557 (898)
T ss_pred HHHHHHHHHHcCCCEEEEechhhCCHHHHHHHHHHHHHhCCCEEEEecCCCcccccchhhhhhhhccccCCCCeEEeccc
Confidence 9999999999999999999999999999999988764 4 78999999742110 00 01122222
Q ss_pred hhHhHhhhhccCCCccc--------ccCc-----h----------------hhHHHHHHhcCchh--hhhhh--------
Q 014892 240 HRQRIINWIDGTGQLSA--------AFDF-----T----------------TKGILQEAVKGQFW--RLRDA-------- 280 (416)
Q Consensus 240 ~~~~l~~~~~~~~~~~~--------~fdf-----~----------------~~~~l~~~~~~~~~--~~~~~-------- 280 (416)
.++.|+ +++.+.. .|-- + ....++..+.|+.. .+...
T Consensus 558 ~RDavr----Gg~~f~~~~~~~~~~Gf~~G~~~~~~~~~~~~~~~~~~~~~~~d~i~~g~~Gnl~~~~~~~~~g~~~~g~ 633 (898)
T TIGR02103 558 LRDAVR----GGGPFDSGDALRQNQGFGSGLAVQPNAHHGLDAASKDGALHLADLTRLGMAGNLKDFVLTDHEGKVVTGE 633 (898)
T ss_pred hhhHhc----CCCccccccccccCcceecCcccCCcccccccchhhhhhhhhHHHHHHhhcCcccccccccccccccccc
Confidence 222222 1110110 0000 0 00112221222211 00000
Q ss_pred ---cCCCCCccccccCcceecccCCCCCCCCCC----CC--CC----hhhHHHHHHHHhcCCCeeEEecCCcC-------
Q 014892 281 ---QGKPPGVMGWWPSRAVTFLDNHDTGSTQAH----WP--FP----SNHIMEGYAYILMHPGIPSVFYDHFY------- 340 (416)
Q Consensus 281 ---~~~~~~~~~~~p~~~~~fl~nHD~~R~~~~----~~--~~----~~~~~~a~a~llt~pGiP~Iy~G~E~------- 340 (416)
+...+.-+...|.+.+||++.||+..+-.. .. .. .++.++|++++++.+|||+|..|+||
T Consensus 634 ~~~y~g~~~~ya~~P~e~inYvs~HDN~TL~D~l~~~~~~~~~~~~r~r~~~la~a~~~lsQGipF~haG~E~lRSK~~~ 713 (898)
T TIGR02103 634 ELDYNGAPAGYAADPTETINYVSKHDNQTLWDAISYKAAAETPSAERVRMQAVSLSTVMLGQGIPFFHAGSELLRSKSFD 713 (898)
T ss_pred ccccCcCccccccCHHHheeeeeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHhChhhHHhcchHhhcCCCCC
Confidence 000011123467789999999999764221 11 11 13457899999999999999999996
Q ss_pred -------------CCc---------------------------------------hhHHHHHHHHHHHHHhCcccCCCC-
Q 014892 341 -------------DWG---------------------------------------DSIHNQIVKLMDVRRQQDIHSRSS- 367 (416)
Q Consensus 341 -------------gw~---------------------------------------~~l~~~~~~Li~lR~~~~~l~~G~- 367 (416)
+|+ ..+.++++.||+||+++|+++-++
T Consensus 714 ~nSY~sgD~~N~vdw~~~~~~~~~glp~~~~n~~~w~~~~~~~~~~~~~p~~~~~~~~~~~~~~Li~lRks~p~Frl~t~ 793 (898)
T TIGR02103 714 RDSYDSGDWFNRVDFSGQDNNWNVGLPRADKDGSNWPIIAPVLQDAAAKPDATDIKATTAFFLELLRIRSSSPLFRLDTA 793 (898)
T ss_pred CCCCcCchhhheecccccccccccCCCcccccccchhhhcccccccccccchhhHHHHHHHHHHHHHHHhCCcccCCCCH
Confidence 121 147899999999999999998763
Q ss_pred ------eEEEEec----CCEEEEEE-C-------------CEEEEEEcCCC
Q 014892 368 ------IKILEAQ----SNLYSAII-G-------------DKVCMKIGDGS 394 (416)
Q Consensus 368 ------~~~~~~~----~~~~~~~R-~-------------~~~lvvinn~~ 394 (416)
..++... +++++++. + +.++||+|.+.
T Consensus 794 ~~I~~~v~F~~~g~~~~~g~i~~~i~d~~~~~~~~~d~~~~~ivVv~Na~~ 844 (898)
T TIGR02103 794 AEVMKRVDFRNTGPDQIPGLIVMSIDDGGIQAGASLDPRYDGIVVIFNARP 844 (898)
T ss_pred HHHHhheEEeccCCcCCCCEEEEEEcCCccccccccccccCeEEEEEcCCC
Confidence 3444433 57999976 2 13677777653
|
Members of this protein family include secreted (or membrane-anchored) pullulanases of Gram-negative bacteria and pullulanase-type starch debranching enzymes of plants. Both enzymes hydrolyze alpha-1,6 glycosidic linkages. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family is closely homologous to, but architecturally different from, the Gram-positive pullulanases of Gram-positive bacteria (TIGR02102). |
| >TIGR02455 TreS_stutzeri trehalose synthase, Pseudomonas stutzeri type | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-41 Score=337.27 Aligned_cols=346 Identities=18% Similarity=0.164 Sum_probs=249.5
Q ss_pred HhhhhhHHHcCCCEEEeCCCCCC---------CC-CCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccccC
Q 014892 49 ERKVPDISKSGFTSVWLPPATHS---------FA-PEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHR 118 (416)
Q Consensus 49 ~~~LdyLk~LGv~~I~L~Pi~~~---------~~-~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~ 118 (416)
....+||++|||++|||+|++++ +. +.||++.| |.|||.|||++||++|+++||++||+||+|+|+|||
T Consensus 77 ~~~wdyL~~LGV~~iwl~P~~~SGgi~g~~~tP~~D~gyDi~d-~~Idp~~GT~eDf~~L~~~Ah~~G~~vi~DlVpnHT 155 (688)
T TIGR02455 77 DALWKALSEIGVQGIHNGPIKLSGGIRGREFTPSIDGNFDRIS-FDIDPLLGSEEELIQLSRMAAAHNAITIDDIIPAHT 155 (688)
T ss_pred hHHHHHHHHhCCCEEEeCcceecccccccCCCCCCCCCCCccc-CccCcccCCHHHHHHHHHHHHHCCCEEEEEeCCCCC
Confidence 45589999999999999999999 65 68999999 699999999999999999999999999999999999
Q ss_pred cCCCCCCCC---cccccCC-----------------CCCCCCC----------------------CceecCCC----CCC
Q 014892 119 VGTTQGHGG---KYNRYDG-----------------IPLSWDE----------------------HAVTSCTG----GLG 152 (416)
Q Consensus 119 ~~~~~~~~~---~~~~f~~-----------------~~~~~~~----------------------~~~~~~~~----~~~ 152 (416)
|..|+ |.. .+.+|.+ .+..|+. ..++.-++ .|.
T Consensus 156 s~ghd-F~lAr~~~~~Y~g~Y~mvei~~~~W~vwpd~~~~~~~~~l~~~~~~~L~~~g~i~~~l~rviF~~pg~e~s~Wt 234 (688)
T TIGR02455 156 GKGAD-FRLAELAHGDYPGLYHMVEIREEDWALLPEVPAGRDAVNLLPAQCDELKAKHYIVGQLQRVIFFEPGIKDTDWS 234 (688)
T ss_pred CCCcc-hHHHhhcCCCCCCceeeccccccccccCCCCCcccccccccHHHHHHHhhccCcccccccceecCCCcccCCce
Confidence 99998 430 0111111 1111110 00110000 111
Q ss_pred --------------CCCCCCCCCCCCcCCCCCHH--HHHHHH-HHHHHHHHhcCCCeEEecccCCCc-------------
Q 014892 153 --------------NGSTGDNFHGVPNIDHTQHF--VRKDII-AWLRWLRNTVGFQDFRFDFARGYS------------- 202 (416)
Q Consensus 153 --------------~~~~~~~~~~~~dln~~~~~--v~~~l~-~~~~~w~~~~gvDGfRlD~a~~~~------------- 202 (416)
+.+...++..+||||+.||. ||+.|+ +++++|. +.|++|||+||+..+.
T Consensus 235 ~d~~v~g~dG~~Rrw~Y~H~F~~~QPdLNw~dPs~av~~~~~gdal~~w~-~lG~~GfRLDAvpfLg~e~~~~~~~~~e~ 313 (688)
T TIGR02455 235 ATGEITGVDGKTRRWVYLHYFKEGQPSLNWLDPTFAAQQLIIGDALHAID-CLGARGLRLDANGFLGVERRAEGTAWSEG 313 (688)
T ss_pred ecccccCCCccchhhhhhhhccCCCCccCccCccHHHHHHHHHHHHHHHH-HhccccceeccccceeeecCCCCCCCCcc
Confidence 11223346899999999999 999999 8999998 9999999999976543
Q ss_pred HHHHHHHHHhc-----CC-ceEEEcccCCCCCCCCCCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHh-cCchh
Q 014892 203 AKYVKEYIEGA-----RP-IFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAV-KGQFW 275 (416)
Q Consensus 203 ~~~~~~~~~~~-----~~-~~~vgE~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~-~~~~~ 275 (416)
..+.+..++.+ ++ .++++|.... .+.+..|+.. +.+..|||.....+..++ .|+..
T Consensus 314 h~ll~~~r~~l~~~~r~~Gg~ll~E~nl~---------------~~d~~~~~g~--~~dl~~dF~t~p~~~~AL~tgda~ 376 (688)
T TIGR02455 314 HPLSLTGNQLIAGAIRKAGGFSFQELNLT---------------IDDIAAMSHG--GADLSYDFITRPAYHHALLTGDTE 376 (688)
T ss_pred CHHHHHHHHHHHHhhhcCCeeEeeeccCC---------------HHHHHHHhCC--CcceeecccccHHHHHHHHcCCHH
Confidence 34544444332 23 6889996543 4677777763 789999999888777776 67765
Q ss_pred hhhhhcCCCCCccccccCcceecccCCCCCCCC-------------------------C---------------------
Q 014892 276 RLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQ-------------------------A--------------------- 309 (416)
Q Consensus 276 ~~~~~~~~~~~~~~~~p~~~~~fl~nHD~~R~~-------------------------~--------------------- 309 (416)
.+...+..... .+..+.+.++|+.|||+-... +
T Consensus 377 pLr~~L~~~~~-~gid~~~~~~~LrNHDELtlelvh~~~~~~~~~~~~~g~~~~g~~l~e~~R~~m~~~~a~d~~p~~m~ 455 (688)
T TIGR02455 377 FLRLMLKEMHA-FGIDPASLIHALQNHDELTLELVHFWTLHAHDHYHYKGQTLPGGHLREHIREEIYERLSGEHAPYNLK 455 (688)
T ss_pred HHHHHHHhhhc-CCCCchhhhhhccCccccchhhhhhcccccccccccccccCCccccCHHHHHHHHHHhcCCCccccce
Confidence 55555443211 122234678999999981100 0
Q ss_pred -------------------------CCCCChhhHHHHHHHHhc----CCCeeEEecC--------------CcCCCc---
Q 014892 310 -------------------------HWPFPSNHIMEGYAYILM----HPGIPSVFYD--------------HFYDWG--- 343 (416)
Q Consensus 310 -------------------------~~~~~~~~~~~a~a~llt----~pGiP~Iy~G--------------~E~gw~--- 343 (416)
....+.+++++++++|++ +||+|+|||| +|+|-.
T Consensus 456 ~~~~gi~~t~a~~ia~~~GIRrLap~~~~d~~~I~~~h~LL~s~na~lPG~p~L~ygdl~GalpL~~~~v~deigmGD~~ 535 (688)
T TIGR02455 456 FVTNGIACTTASLIAAALGIRDLDAIGPADIELIKKLHILLVMFNAMQPGVFALSGWDLVGALPLAAEAVAELMGDGDTR 535 (688)
T ss_pred EEeccccccchhhhhhhcCCccchhhCCCCHHHHHHHHHHHHHhhccCCCceEeecccccccccccccchhhhhccCccc
Confidence 011234568999999999 9999999999 776411
Q ss_pred ----------------------------------------hhHHHHHHHHHHHHHhCcccCCCCeEEEEecC-CEEEEEE
Q 014892 344 ----------------------------------------DSIHNQIVKLMDVRRQQDIHSRSSIKILEAQS-NLYSAII 382 (416)
Q Consensus 344 ----------------------------------------~~l~~~~~~Li~lR~~~~~l~~G~~~~~~~~~-~~~~~~R 382 (416)
.++.+.+++|+++||+++++..|.+..+..++ .++++.+
T Consensus 536 wl~rggfs~~~~~p~~~~s~~~lP~~~~~Ygnv~~Ql~dp~S~l~~l~~il~vR~~~~i~~~~~~~~~~~~~~gvLa~v~ 615 (688)
T TIGR02455 536 WIHRGGYDLADLAPEAEASAEGLPKARALYGSLAEQLDEPDSFACKLKKILAVRQAYDIAASKQILIPDVQAPGLLVMVH 615 (688)
T ss_pred cccCCCcccCCCCchhhhccCCCCCCcCCCCCHHHHhhCCccHHHHHHHHHHHHHhCCcccCceeeecCCCCCcEEEEEE
Confidence 27999999999999999999999999887754 7888876
Q ss_pred ---C--CEEEEEEcCCCCC------------------------C---CCCCcEEeeeCCceEEee
Q 014892 383 ---G--DKVCMKIGDGSWC------------------------P---AGKEWTLATSGHKYAVWH 415 (416)
Q Consensus 383 ---~--~~~lvvinn~~~~------------------------~---~~~~~~~~ls~~~~~~~~ 415 (416)
+ +.+++|.|.+... + ..+.+++.|++++|++++
T Consensus 616 ~l~~~~~~~L~v~Nfs~~~~~~~l~l~~~~~~~~~dl~~~~~~~~~~~~~~~~i~L~~y~~~wl~ 680 (688)
T TIGR02455 616 ELPAGKGIQITALNFGADAIAEEICLPGFAPGPVVDIIHESVEGDLTDDCELMINLDPYEALALR 680 (688)
T ss_pred EcCCCCceEEEeeccCCCCeeeEEeccccCCCCceeccCCCccCCcCCCceeEEEecCcceEEEE
Confidence 3 4566666664311 0 225689999999999875
|
Trehalose synthase catalyzes a one-step conversion of maltose to trehalose. This is an alternative to the OtsAB and TreYZ pathways. This family includes a characterized example from Pseudomonas stutzeri plus very closely related sequences from other Pseudomonads. Cutoff scores are set to find a more distantly related sequence from Desulfovibrio vulgaris, likely to be functionally equivalent, between trusted and noise limits. |
| >PLN02877 alpha-amylase/limit dextrinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-41 Score=357.82 Aligned_cols=345 Identities=15% Similarity=0.188 Sum_probs=223.2
Q ss_pred cCceeEEEeeecCCCC---------CCcHHHHHhh-------hhhHHHcCCCEEEeCCCCCCC-----------------
Q 014892 26 NGREILFQGFNWESCK---------HDWWRNLERK-------VPDISKSGFTSVWLPPATHSF----------------- 72 (416)
Q Consensus 26 ~~~~~~~q~f~~~~~~---------~G~~~gi~~~-------LdyLk~LGv~~I~L~Pi~~~~----------------- 72 (416)
..+.+||.+=.++++. .|+|.|++++ |+|||+||||+|+|||+|+..
T Consensus 337 ~~D~VIYElHVRDFS~~d~sv~~~~RGtylgftE~~s~gi~hLk~LkelGVThVeLLPvfDf~tvdE~~~~~~~~~~~~l 416 (970)
T PLN02877 337 FSDISIYELHVRDFSANDETVHPDFRGGYLAFTSQDSAGVLHLKKLADAGLTHVHLLPTFQFGSVDDEKENWKCVDPKEL 416 (970)
T ss_pred CcccEEEEEeccccccCCCCCCcCCCCcchhhhhhhhhHHHHHHHHHHcCCCEEEeCCccccCCcccccccccccccchh
Confidence 3578999999998864 2899998887 667777799999999999742
Q ss_pred ----------------------CCCCcccccCCCCCCCCCC-------HHHHHHHHHHHHHCCCEEEEEEccccCcCCCC
Q 014892 73 ----------------------APEGYLPQNLYSLNSSYGS-------EHLLKALLHKMKQHKVRAMADIVINHRVGTTQ 123 (416)
Q Consensus 73 ----------------------~~~GY~~~d~~~id~~~Gt-------~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~ 123 (416)
.+|||+|..|++++..|++ ..|||+||++||++||+||||+|+||++..++
T Consensus 417 ~~~~~~s~~~q~~v~~~~~~d~yNWGYDP~~YfaPEgSYatdP~g~~RI~efk~mV~~lH~~GI~VImDVVyNHt~~~g~ 496 (970)
T PLN02877 417 EKLPPDSEEQQAAITAIQDDDGYNWGYNPVLWGVPKGSYASNPDGPCRIIEFRKMVQALNRIGLRVVLDVVYNHLHSSGP 496 (970)
T ss_pred ccccccchhhhhcccccccCCCCCCCCCccccCCCCcccccCCCCcchHHHHHHHHHHHHHCCCEEEEEECCccccCCCC
Confidence 3589999999999999998 25899999999999999999999999998776
Q ss_pred CCC-CcccccCCCCCCCCCCceecC-CCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCC
Q 014892 124 GHG-GKYNRYDGIPLSWDEHAVTSC-TGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGY 201 (416)
Q Consensus 124 ~~~-~~~~~f~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~ 201 (416)
+.. +.+.... +...... .++.... .....+.+.++++||++|++++++|+++|||||||||++.++
T Consensus 497 ~~~~s~ld~~v-------P~YY~r~~~~G~~~n-----s~c~n~~Ase~~mvrklIlDsl~yW~~ey~VDGFRFDlmg~i 564 (970)
T PLN02877 497 FDENSVLDKIV-------PGYYLRRNSDGFIEN-----STCVNNTASEHYMVDRLIVDDLLNWAVNYKVDGFRFDLMGHL 564 (970)
T ss_pred cchhhcccCCC-------CCceEEECCCCCccc-----CCccCCCccCCHHHHHHHHHHHHHHHHHhCCCEEEEEccccc
Confidence 432 2111111 1000111 1111111 122356688999999999999999999999999999999999
Q ss_pred cHHHHHHHHHhcC-----------C-ceEEEcccCCCCCC-------CC-------CCCCccchhhHhHhh---hhcc-C
Q 014892 202 SAKYVKEYIEGAR-----------P-IFSVGEYWDSCNYN-------SH-------GLDYNQDSHRQRIIN---WIDG-T 251 (416)
Q Consensus 202 ~~~~~~~~~~~~~-----------~-~~~vgE~~~~~~~~-------~~-------~~~~~~~~~~~~l~~---~~~~-~ 251 (416)
+.+.|.++.+.++ + .+++||.|+..+.. .. ...++++..++.|+. |-+. .
T Consensus 565 ~~~tm~~~~~~L~~i~~~~~~~dg~~i~lyGEgW~~g~~~~~~~~~~A~q~n~~g~gIg~FnD~~RDavkGg~~F~~~~~ 644 (970)
T PLN02877 565 MKRTMVRAKDALQSLTLERDGVDGSSIYLYGEGWDFGEVAKNGRGVNASQFNLAGTGIGSFNDRIRDAMLGGSPFGHPLQ 644 (970)
T ss_pred cHHHHHHHHHHHHHHhhhhcccCCCceEEEEeCCCCCCcccccccccccccccCCCceEEecchhHHHHcCCCCCCCcCC
Confidence 9998776654322 2 68999999743210 00 111222222333321 1000 0
Q ss_pred CCcccc-cC------c----h-------hhHHHHHHhcCchhhh--hhh------------cCCCCCccccccCcceecc
Q 014892 252 GQLSAA-FD------F----T-------TKGILQEAVKGQFWRL--RDA------------QGKPPGVMGWWPSRAVTFL 299 (416)
Q Consensus 252 ~~~~~~-fd------f----~-------~~~~l~~~~~~~~~~~--~~~------------~~~~~~~~~~~p~~~~~fl 299 (416)
.++.+. +. . . ....++..+.|+...+ .+. ....+.-+...|.+.|||+
T Consensus 645 qGf~~G~~~~pn~~~~~~~~~~~~~~~~~~d~i~~glaGnl~~~~~~~~~g~~~~g~~~~~y~~~~~~ya~~P~q~InYv 724 (970)
T PLN02877 645 QGFVTGLFLQPNGHDQGGEDVQELMLATAKDHIQVGMAGNLKDYVLTNREGKEVKGSEVLTHDGKPVAYASSPTETINYV 724 (970)
T ss_pred CceecccccCCcccccccchhhhhhhhhhHHHHHHHhccchhccccccccccccccccccccCCcccccccCHHHheeee
Confidence 000000 00 0 0 0112222222322110 000 0000011234678999999
Q ss_pred cCCCCCCCCCC----CC--CC----hhhHHHHHHHHhcCCCeeEEecCCcC--------------------CCch-----
Q 014892 300 DNHDTGSTQAH----WP--FP----SNHIMEGYAYILMHPGIPSVFYDHFY--------------------DWGD----- 344 (416)
Q Consensus 300 ~nHD~~R~~~~----~~--~~----~~~~~~a~a~llt~pGiP~Iy~G~E~--------------------gw~~----- 344 (416)
+.||+..+-.. .. .. .++.++|++++++++|||+|..|+|| +|+.
T Consensus 725 s~HDN~TL~D~l~~~~~~~~s~~~r~r~~~la~aiv~lsQGipF~haG~E~lRSK~~d~nSYnSgD~~N~lDw~~~~nn~ 804 (970)
T PLN02877 725 SAHDNETLFDIISLKTPMEISVDERCRINHLATSIIALSQGIPFFHAGDEILRSKSLDRDSYNSGDWFNRLDFSYDSNNW 804 (970)
T ss_pred eccCCchHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhChhhHHhcchhhhcCCCCCCCCCcCchhhheeccccccCcc
Confidence 99999764321 11 01 13467999999999999999999996 2321
Q ss_pred ----------------------------------hHHHHHHHHHHHHHhCcccCCCC-------eEEEEec----CCEEE
Q 014892 345 ----------------------------------SIHNQIVKLMDVRRQQDIHSRSS-------IKILEAQ----SNLYS 379 (416)
Q Consensus 345 ----------------------------------~l~~~~~~Li~lR~~~~~l~~G~-------~~~~~~~----~~~~~ 379 (416)
...+++|.||+||+++|+|+.++ ..++... +++++
T Consensus 805 ~~GlP~~~~~~~~w~~~~~~l~~~~~~p~~~~i~~~~~~~~~Li~lRks~plFrl~t~~~I~~~v~F~~~g~~~~~gvi~ 884 (970)
T PLN02877 805 GVGLPPKEKNEDNWPLIKPRLADPSFKPSKEHILAALDNFLDLLRIRYSSPLFRLRTANAIQERVRFHNTGPSSIPGVIV 884 (970)
T ss_pred ccCCChhHhcchhhhhhhhhhcccccccchhHHHHHHHHHHHHHHHHhcCcccCCCCHHHHHhhcEEeccCCCcCCCEEE
Confidence 34788999999999999998774 3444443 27999
Q ss_pred EEE
Q 014892 380 AII 382 (416)
Q Consensus 380 ~~R 382 (416)
|+.
T Consensus 885 ~~i 887 (970)
T PLN02877 885 MSI 887 (970)
T ss_pred EEE
Confidence 976
|
|
| >KOG0471 consensus Alpha-amylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-42 Score=350.95 Aligned_cols=363 Identities=25% Similarity=0.344 Sum_probs=243.3
Q ss_pred ceeEEEeeecCCCC-----CCcHHHHHhhhhhHHHcCCCEEEeCCCCCCCC-CCCcccccCCCCCCCCCCHHHHHHHHHH
Q 014892 28 REILFQGFNWESCK-----HDWWRNLERKVPDISKSGFTSVWLPPATHSFA-PEGYLPQNLYSLNSSYGSEHLLKALLHK 101 (416)
Q Consensus 28 ~~~~~q~f~~~~~~-----~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~-~~GY~~~d~~~id~~~Gt~~d~~~Lv~~ 101 (416)
.+.+||++-.++.- .||++||++||||||+|||++|||+||++++. ++||++.||+.|+|+|||+|||++||++
T Consensus 17 ~~~~YQI~~~sF~~s~~d~~G~~~GI~~kldyi~~lG~taiWisP~~~s~~~~~GY~~~d~~~l~p~fGt~edf~~Li~~ 96 (545)
T KOG0471|consen 17 TESIYQIYPDSFADSDGDGVGDLKGITSKLDYIKELGFTAIWLSPFTKSSKPDFGYDASDLEQLRPRFGTEEDFKELILA 96 (545)
T ss_pred cCceeEEeccccccccCCCccccccchhhhhHHHhcCCceEEeCCCcCCCHHHhccCccchhhhcccccHHHHHHHHHHH
Confidence 48899999987643 38999999999999999999999999999985 6999999999999999999999999999
Q ss_pred HHHCCCEEEEEEccccCcCCCCCCCCc----------ccccCCC---------CCCCCCCcee---cCCCCCCCCCCCCC
Q 014892 102 MKQHKVRAMADIVINHRVGTTQGHGGK----------YNRYDGI---------PLSWDEHAVT---SCTGGLGNGSTGDN 159 (416)
Q Consensus 102 aH~~Gi~VilD~V~NH~~~~~~~~~~~----------~~~f~~~---------~~~~~~~~~~---~~~~~~~~~~~~~~ 159 (416)
+|++||++|+|+|+||++..++|+... |.++.+. +..|.+.... .+..+.+..+.+..
T Consensus 97 ~h~~gi~ii~D~viNh~~~~~~wf~~~~~~~~~y~d~~~~~~~~~~~~g~~~~p~nw~~~~~~s~~~~~e~~~~~~l~~~ 176 (545)
T KOG0471|consen 97 MHKLGIKIIADLVINHRSDEVEWFKASPTSKTGYEDWYPWHDGSSLDVGKRIPPLNWLSVFGGSAWPFDEGRQKYYLGQF 176 (545)
T ss_pred HhhcceEEEEeeccccCCccccccccCccccccceeeeeccCcccccccCCCCccchHhhhccccCcccccccceeccch
Confidence 999999999999999999999876522 1122221 2233322111 11122233444555
Q ss_pred CCCCCcCCCCCHHHHHHHHHHHH-HHHHhcCCCeEEecccCCCcHHHHHHHHHhcCCceEEEcccCCCCC-CCCCCCCcc
Q 014892 160 FHGVPNIDHTQHFVRKDIIAWLR-WLRNTVGFQDFRFDFARGYSAKYVKEYIEGARPIFSVGEYWDSCNY-NSHGLDYNQ 237 (416)
Q Consensus 160 ~~~~~dln~~~~~v~~~l~~~~~-~w~~~~gvDGfRlD~a~~~~~~~~~~~~~~~~~~~~vgE~~~~~~~-~~~~~~~~~ 237 (416)
...+||+|++||+|++.+.++++ +|. ++||||||+|+++++..+++. ......|.+.+||.|.++++ ......|..
T Consensus 177 ~~~~pDln~~n~~V~~~~~~~l~~~~~-~~gvdGfRiD~v~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~y~~ 254 (545)
T KOG0471|consen 177 AVLQPDLNYENPDVRKAIKEWLRDFWL-EKGVDGFRIDAVKGYAGENFK-NMWPDEPVFDVGEKLQDDNYVAYQYNDYGE 254 (545)
T ss_pred hhcCCCCCCCCHHHHHHHHHHHHHHHh-hcCCCeEEEEccccccccccc-ccccCCCcccceeEecCcchhhcccccccc
Confidence 67899999999999999999999 676 999999999999999999888 33333357788998877543 112222222
Q ss_pred chhh--HhHhhhhccCCCcccccCchhhHHH-----------HHHh-cCchh---------hhhhhcCCC---------C
Q 014892 238 DSHR--QRIINWIDGTGQLSAAFDFTTKGIL-----------QEAV-KGQFW---------RLRDAQGKP---------P 285 (416)
Q Consensus 238 ~~~~--~~l~~~~~~~~~~~~~fdf~~~~~l-----------~~~~-~~~~~---------~~~~~~~~~---------~ 285 (416)
+... .-+..+-.........+.+.-...+ .... ++... ......... .
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~ 334 (545)
T KOG0471|consen 255 DQPEIHDLIRAERFLLDDYSAAFGFGDKRILQTEAYSSLEQLLRLLENSSKPRGSDLPFNFDTLSDLGLTVASIYKEVEV 334 (545)
T ss_pred cchhhhhHHHHHHhhhhhhhhcccccchhhhhhhhhccHHHHHhhhccCCCCccccccchhhhhhhhhccchHHHHHHHH
Confidence 1100 0011110111112223332211111 1110 00000 000000000 0
Q ss_pred Ccccccc--C-cceecccCCCCCCCCCCCCCChhhHHHHHHHHhcCCCeeEEecCCcCC---------------------
Q 014892 286 GVMGWWP--S-RAVTFLDNHDTGSTQAHWPFPSNHIMEGYAYILMHPGIPSVFYDHFYD--------------------- 341 (416)
Q Consensus 286 ~~~~~~p--~-~~~~fl~nHD~~R~~~~~~~~~~~~~~a~a~llt~pGiP~Iy~G~E~g--------------------- 341 (416)
..+...+ . .+...++|||..|..++++.+ ..++..++++|+||+|++|+|+|+|
T Consensus 335 ~~~~~~~~~~~~a~W~~~~~~~~r~~sr~~~~--~~~~~~~l~~tlpG~~~~y~g~e~g~~~~~~~~~~~~~~~~~~~rt 412 (545)
T KOG0471|consen 335 DWLSNHDTENRWAHWVLGNHDQARLASRFGSD--SVDLLNVLLLTLPGTPVTYYGEEIGMDDVAISGEDGEDPKLMQSRT 412 (545)
T ss_pred HHHhcCCccCCceeeeecCccchhhHHHhcch--hHHHHhHHhcccCCCceEEEeEEeeccceeeccCCCcCcHHhccCC
Confidence 0000111 1 234556778888887776533 4677788999999999999999964
Q ss_pred ---Cc---------------------------------hhHHHHHHHHHHHHHhCcccCCCCeEEEEecCCEEEEEE---
Q 014892 342 ---WG---------------------------------DSIHNQIVKLMDVRRQQDIHSRSSIKILEAQSNLYSAII--- 382 (416)
Q Consensus 342 ---w~---------------------------------~~l~~~~~~Li~lR~~~~~l~~G~~~~~~~~~~~~~~~R--- 382 (416)
|+ ++++..++++..+|+....+..|.......++++++|.|
T Consensus 413 ~~~w~~~~~~gfs~~~~~~~~~~~~~~~~n~~~~~~~~~s~~~~~~~~~~lr~~~~~~~~g~~~~~~~~~~if~~~r~~~ 492 (545)
T KOG0471|consen 413 PMQWDESTNAGFSEASKTWLPVNADYTVINVKMQSGDPQSTLKLFKRLLDLRKSERSYLHGSFVLFAATPGLFSFSRNWD 492 (545)
T ss_pred ccccccccccCCCCccCcceeccccchhheeeccccCCccHHHHHHHHHHHhhhcccccccceeeecCCCceEEEEeccC
Confidence 11 268899999999999998788888888888889999998
Q ss_pred -CCEEEEEEcCCC
Q 014892 383 -GDKVCMKIGDGS 394 (416)
Q Consensus 383 -~~~~lvvinn~~ 394 (416)
.+..++++|.+.
T Consensus 493 ~~~~~~~~~~~~~ 505 (545)
T KOG0471|consen 493 GNERFIAVLNFGD 505 (545)
T ss_pred CCceEEEEEecCC
Confidence 345555555543
|
|
| >COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-41 Score=339.72 Aligned_cols=348 Identities=16% Similarity=0.192 Sum_probs=221.6
Q ss_pred ceeEEEeeecCCCC---CCcHHHHHhhhhhHHHcCCCEEEeCCCCCCCC--CCCcccccCCCCCCCCCCHHHHHHHHHHH
Q 014892 28 REILFQGFNWESCK---HDWWRNLERKVPDISKSGFTSVWLPPATHSFA--PEGYLPQNLYSLNSSYGSEHLLKALLHKM 102 (416)
Q Consensus 28 ~~~~~q~f~~~~~~---~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~--~~GY~~~d~~~id~~~Gt~~d~~~Lv~~a 102 (416)
.-+||-+=.-..+. .|+++.++++|||||+||||+|+||||.+.+. +|||+++-||++.++|||++|||+||++|
T Consensus 144 ~~vIYElHvGs~~~~~~~~~~e~a~~llpYl~elG~T~IELMPv~e~p~~~sWGYq~~g~yAp~sryGtPedfk~fVD~a 223 (628)
T COG0296 144 PIVIYELHVGSFTPDRFLGYFELAIELLPYLKELGITHIELMPVAEHPGDRSWGYQGTGYYAPTSRYGTPEDFKALVDAA 223 (628)
T ss_pred CceEEEEEeeeccCCCCcCHHHHHHHHhHHHHHhCCCEEEEcccccCCCCCCCCCCcceeccccccCCCHHHHHHHHHHH
Confidence 35677666655555 79999999999999999999999999999884 79999999999999999999999999999
Q ss_pred HHCCCEEEEEEccccCcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHH
Q 014892 103 KQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLR 182 (416)
Q Consensus 103 H~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~ 182 (416)
|++||.||||+|+||.+.+...- ..|++....-+..........|+ ..-.|+..++||++|++++.
T Consensus 224 H~~GIgViLD~V~~HF~~d~~~L----~~fdg~~~~e~~~~~~~~~~~Wg----------~~i~~~gr~EVR~Fll~nal 289 (628)
T COG0296 224 HQAGIGVILDWVPNHFPPDGNYL----ARFDGTFLYEHEDPRRGEHTDWG----------TAIFNYGRNEVRNFLLANAL 289 (628)
T ss_pred HHcCCEEEEEecCCcCCCCcchh----hhcCCccccccCCcccccCCCcc----------cchhccCcHHHHHHHHHHHH
Confidence 99999999999999999965421 12222111111000001111111 12245558999999999999
Q ss_pred HHHHhcCCCeEEecccCCCc------------------------HHHHHHHHHhcC---C-ceEEEcccCCCCCCCCCCC
Q 014892 183 WLRNTVGFQDFRFDFARGYS------------------------AKYVKEYIEGAR---P-IFSVGEYWDSCNYNSHGLD 234 (416)
Q Consensus 183 ~w~~~~gvDGfRlD~a~~~~------------------------~~~~~~~~~~~~---~-~~~vgE~~~~~~~~~~~~~ 234 (416)
+|+++|+|||+|+|||..|. .+|+++..+-++ | .+.|+|-|...+.
T Consensus 290 ~Wl~~yHiDGlRvDAV~smly~d~~~~~~~~~~n~~ggr~n~~a~efl~~~n~~i~~~~pg~~~iaeestd~~~------ 363 (628)
T COG0296 290 YWLEEYHIDGLRVDAVASMLYLDYSRAEGEWVPNEYGGRENLEAAEFLRNLNSLIHEEEPGAMTIAEESTDDPH------ 363 (628)
T ss_pred HHHHHhCCcceeeehhhhhhccchhhhhhcccccccCCcccHHHHHHhhhhhhhhcccCCCceeeeeeccCCCC------
Confidence 99999999999999997663 234444444443 3 5778888876321
Q ss_pred CccchhhHhHhhhhccCCCcccccCchhhHHHHHHh--cCc--hhhhhhhcCCCCCccccccCcceecccCCCCC--CCC
Q 014892 235 YNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAV--KGQ--FWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTG--STQ 308 (416)
Q Consensus 235 ~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~--~~~--~~~~~~~~~~~~~~~~~~p~~~~~fl~nHD~~--R~~ 308 (416)
-.+...+. +.++.-..|+. .|.+.+ .+. ..+....-....++ -+.+...+.+..|||+. -..
T Consensus 364 -------~t~~~~~g-G~gf~yk~nmg---~m~D~~~y~~~~~~~r~~~h~~~tf~~-~y~~se~~~l~~sHDevvhGk~ 431 (628)
T COG0296 364 -------VTLPVAIG-GLGFGYKWNMG---WMHDTLFYFGKDPVYRKYHHGELTFGL-LYAFSENVVLPLSHDEVVHGKR 431 (628)
T ss_pred -------ceeeeccc-ccchhhhhhhh---hHhhHHHhcccCccccccccCCCcccc-ccccceeEeccccccceeeccc
Confidence 00000111 11122222322 222222 121 11111111100111 13345778999999996 222
Q ss_pred C---CCCC----ChhhHHHHHHHHhcCCCeeEEecCCcCCCc-----------------------hhHHHHHHHHHHHHH
Q 014892 309 A---HWPF----PSNHIMEGYAYILMHPGIPSVFYDHFYDWG-----------------------DSIHNQIVKLMDVRR 358 (416)
Q Consensus 309 ~---~~~~----~~~~~~~a~a~llt~pGiP~Iy~G~E~gw~-----------------------~~l~~~~~~Li~lR~ 358 (416)
+ ++.. ....++.++++|++.||+|++|+|+|||-. +++..+.+.|.++-+
T Consensus 432 sl~~rm~g~~~~~~a~lr~~~a~~~~~Pgk~LLFMG~Efgq~~e~~~~~~~~w~~L~~~~~~g~~~~~~~~~~~ln~~y~ 511 (628)
T COG0296 432 SLGERMPGDAWQKFANLRALAAYMWLHPGKPLLFMGEEFGQGREWNFFSSLDWLLLDQAVREGRHKEFRRLVRDLNALYR 511 (628)
T ss_pred chhccCCcchhhhHHHHHHHHHHHHhCCCceeeecchhhccCCCCcccCCCChhhhhhccccchHHHHHHHHHhhHHhhc
Confidence 2 2211 234688999999999999999999998621 245555665665666
Q ss_pred hCcccCCC-----CeEEEEec---CCEEEEEE-----CCEEEEEEcCCCCC---------CCCCCcEEeee
Q 014892 359 QQDIHSRS-----SIKILEAQ---SNLYSAII-----GDKVCMKIGDGSWC---------PAGKEWTLATS 407 (416)
Q Consensus 359 ~~~~l~~G-----~~~~~~~~---~~~~~~~R-----~~~~lvvinn~~~~---------~~~~~~~~~ls 407 (416)
..+.+..- .+..+..+ +++++|.| +++.+|++||.... |.++.|+..+.
T Consensus 512 ~~~~l~~~~~~~~~~~W~~~~~~~~~v~af~R~l~~~~~~~lv~~~n~~~~~~~~y~~~~~~~g~~~~~ln 582 (628)
T COG0296 512 IPDPLHEQDFQPEGFEWIDADDAENSVLAFYRRLLALRHEHLVVVNNFTPVPRVDYRVGVPVAGRWREVLN 582 (628)
T ss_pred cCCccchhhhcccCCceeecCchhhhHHHHHHHHhhcCCceEEEEeCCCCCcccccccCCcccccEEEecc
Confidence 66666543 33444432 35888877 45667777775432 23456777665
|
|
| >TIGR02401 trehalose_TreY malto-oligosyltrehalose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-39 Score=338.21 Aligned_cols=185 Identities=17% Similarity=0.196 Sum_probs=145.0
Q ss_pred CCCCCcHHHHHhhhhhHHHcCCCEEEeCCCCCCC--CCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccc
Q 014892 39 SCKHDWWRNLERKVPDISKSGFTSVWLPPATHSF--APEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVIN 116 (416)
Q Consensus 39 ~~~~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~--~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~N 116 (416)
+.++++|++++++||||++||||+|||+||+++. ++|||+++||+.|+|+||++++|++||++||++||+||+|+|+|
T Consensus 9 ~~~~~tf~~~~~~L~YL~~LGv~~V~lsPi~~a~~gs~hGYdv~D~~~idp~lGt~edf~~Lv~aah~~Gm~vIlDiVpN 88 (825)
T TIGR02401 9 LRAGFTFDDAAALLPYLKSLGVSHLYLSPILTAVPGSTHGYDVVDHSEINPELGGEEGLRRLSEAARARGLGLIVDIVPN 88 (825)
T ss_pred eCCCCCHHHHHHhhHHHHHcCCCEEEeCcCccCCCCCCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHCCCEEEEEeccc
Confidence 4567899999999999999999999999999864 68999999999999999999999999999999999999999999
Q ss_pred cCcCC---CCCC--------CCcccccCCCCCCCCCCc----------------------------------------ee
Q 014892 117 HRVGT---TQGH--------GGKYNRYDGIPLSWDEHA----------------------------------------VT 145 (416)
Q Consensus 117 H~~~~---~~~~--------~~~~~~f~~~~~~~~~~~----------------------------------------~~ 145 (416)
|++.+ ++|+ .+.|..|.. .+|++.. .+
T Consensus 89 H~a~~~~~n~wf~dvl~~g~~S~y~~~Fd--idw~~~~~~gkvllP~Lg~~y~~~l~~g~l~l~~d~~~~~~l~y~~~~~ 166 (825)
T TIGR02401 89 HMAVHLEQNPWWWDVLKNGPSSAYAEYFD--IDWDPLGGDGKLLLPILGDQYGAVLDRGEIKLRFDGDGTLALRYYDHRL 166 (825)
T ss_pred ccccccccChHHHHHHHhCCCCCccCceE--EeCCCCCCCCceeecccCchhhhHHhcCceeeeecCCCceeEEecCccC
Confidence 99987 4442 233432221 2222100 00
Q ss_pred cCCC-------------C------------------C------CCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhc
Q 014892 146 SCTG-------------G------------------L------GNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTV 188 (416)
Q Consensus 146 ~~~~-------------~------------------~------~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~ 188 (416)
+-.. + | .+.....+..+++.++.++|+|.+...+.+..|+++.
T Consensus 167 Pi~p~ty~~il~~~~~~~~~~~l~~ll~~Q~yRL~~Wr~a~~~inYRrFf~i~~L~~lr~E~~~Vf~~~h~~i~~lv~~g 246 (825)
T TIGR02401 167 PLAPGTLPELEVLEDVPGDGDALKKLLERQHYRLTWWRVAAGEINYRRFFDINDLAGVRVEDPAVFDATHRLVLELVAEG 246 (825)
T ss_pred CcCccchhhhhhhccccCChhhHHHHHHHHHHHhhhhhccccccCcccccCccccccccCCCHHHHHHHHHHHHHHHHcC
Confidence 0000 0 0 0011112346799999999999999999999999666
Q ss_pred CCCeEEecccCCC--cHHHHHHHHHhcCC-ceEEEc-ccCC
Q 014892 189 GFQDFRFDFARGY--SAKYVKEYIEGARP-IFSVGE-YWDS 225 (416)
Q Consensus 189 gvDGfRlD~a~~~--~~~~~~~~~~~~~~-~~~vgE-~~~~ 225 (416)
-|||+|+|+++++ |..+|+.+.+++.+ .+++.| ++..
T Consensus 247 ~vdGlRIDh~dGL~dP~~Yl~rLr~~~~~~~yivvEKIl~~ 287 (825)
T TIGR02401 247 LVDGLRIDHIDGLADPEGYLRRLRELVGPARYLVVEKILAP 287 (825)
T ss_pred CCceEEeccccccCChHHHHHHHHHhcCCCceEEEEEeccC
Confidence 6999999999999 88899999988886 778888 5544
|
This enzyme, formally named (1-4)-alpha-D-glucan 1-alpha-D-glucosylmutase, is the TreY enzyme of the TreYZ pathway of trehalose biosynthesis, an alternative to the OtsAB pathway. Trehalose may be incorporated into more complex compounds but is best known as compatible solute. It is one of the most effective osmoprotectants, and unlike the various betaines does not require nitrogen for its synthesis. |
| >COG1523 PulA Type II secretory pathway, pullulanase PulA and related glycosidases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-40 Score=340.37 Aligned_cols=318 Identities=17% Similarity=0.271 Sum_probs=212.3
Q ss_pred eeeccCceeEEEeeecCCCC---------CCcHHHHHhh--hhhHHHcCCCEEEeCCCCCCC-----------CCCCccc
Q 014892 22 AVIRNGREILFQGFNWESCK---------HDWWRNLERK--VPDISKSGFTSVWLPPATHSF-----------APEGYLP 79 (416)
Q Consensus 22 ~~~~~~~~~~~q~f~~~~~~---------~G~~~gi~~~--LdyLk~LGv~~I~L~Pi~~~~-----------~~~GY~~ 79 (416)
|+++-.+.|||-.=.+++++ .|+|.|++++ |+|||+||||+|+||||+... .+|||+|
T Consensus 165 ~~~p~~~~vIYE~HVr~fT~~~~~v~~~~rGTy~gl~~~~~i~yLk~LGvtaVeLLPV~~~~~~~~l~~~gl~n~WGYdP 244 (697)
T COG1523 165 PRIPWEDTVIYEAHVRDFTQLHPGVPEELRGTYLGLAEPVIIDYLKDLGVTAVELLPVFDFYDEPHLDKSGLNNNWGYDP 244 (697)
T ss_pred CCCCccceEEEEeeecccccCCCCCchhhccceehhccccHHHHHHHhCCceEEEecceEEeccccccccccccccCCCc
Confidence 44556778999999998872 2999999999 999999999999999999643 4899999
Q ss_pred ccCCCCCCCCCC-------HHHHHHHHHHHHHCCCEEEEEEccccCcCCCC-CCCCcccccCC---CCCCCCCCceecCC
Q 014892 80 QNLYSLNSSYGS-------EHLLKALLHKMKQHKVRAMADIVINHRVGTTQ-GHGGKYNRYDG---IPLSWDEHAVTSCT 148 (416)
Q Consensus 80 ~d~~~id~~~Gt-------~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~-~~~~~~~~f~~---~~~~~~~~~~~~~~ 148 (416)
..||+++++|-+ ..|||.||+++|++||+||||||+|||+.... +.. ..|++ ..+.+.. .
T Consensus 245 ~~fFAp~~~Yss~p~p~~~i~EfK~mV~~lHkaGI~VILDVVfNHTae~~~~g~t---~~f~~id~~~Yyr~~------~ 315 (697)
T COG1523 245 LNFFAPEGRYASNPEPATRIKEFKDMVKALHKAGIEVILDVVFNHTAEGNELGPT---LSFRGIDPNYYYRLD------P 315 (697)
T ss_pred ccccCCCccccCCCCcchHHHHHHHHHHHHHHcCCEEEEEEeccCcccccCcCcc---cccccCCcCceEEEC------C
Confidence 999999999965 34999999999999999999999999986321 111 11221 0011111 1
Q ss_pred CCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcHHHH-----HHHHHhcC--C----ce
Q 014892 149 GGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYV-----KEYIEGAR--P----IF 217 (416)
Q Consensus 149 ~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~~~~-----~~~~~~~~--~----~~ 217 (416)
++.....++| ...+|.++|.||++|+|+++||+++++|||||||.+..+..+.. ..+...+. | .-
T Consensus 316 dg~~~N~TGc----GNtln~~hpmvrk~ivDsLrYWv~e~hVDGFRFDLa~~l~r~~~~~~~~~~l~~~~~~~p~l~~~k 391 (697)
T COG1523 316 DGYYSNGTGC----GNTLNTEHPMVRKLIVDSLRYWVEEYHVDGFRFDLAGVLGRETMLFDINANLFLAGEGDPVLSGVK 391 (697)
T ss_pred CCCeecCCcc----CcccccCChHHHHHHHHHHHHHHHHhCCCceeecchhhccccccccccCcchhhhccCCccccCce
Confidence 1111112333 56799999999999999999999999999999999987765544 12222221 1 34
Q ss_pred EEEcccCCCC--CCCCCCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHhcCch---hhhhhhcCCCCCcc---c
Q 014892 218 SVGEYWDSCN--YNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKGQF---WRLRDAQGKPPGVM---G 289 (416)
Q Consensus 218 ~vgE~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~~~~~---~~~~~~~~~~~~~~---~ 289 (416)
++||.|+-.+ ++-|... .... .+..+-.++..++.+..|+. ..+...+..+...+ +
T Consensus 392 liAepwD~g~~gyqvG~Fp--------d~~~--------~aewng~~rD~vr~F~~G~~~~~~~~a~rl~gS~d~~~~~~ 455 (697)
T COG1523 392 LIAEPWDIGPGGYQVGNFP--------DSPR--------WAEWNGRFRDDVRRFWRGDAGLVGEFAKRLAGSSDLYKRNG 455 (697)
T ss_pred eeecchhhcCCCcccccCC--------Cccc--------hhhhCCcccccccceeeCCCccHHHHHHHhhcCcchhhccC
Confidence 7888886431 2211110 0001 11122223344444443332 22222222211112 2
Q ss_pred cccCcceecccCCCCCCCCC-----------------------------CC---------CCChhhHHHHHHHHhcCCCe
Q 014892 290 WWPSRAVTFLDNHDTGSTQA-----------------------------HW---------PFPSNHIMEGYAYILMHPGI 331 (416)
Q Consensus 290 ~~p~~~~~fl~nHD~~R~~~-----------------------------~~---------~~~~~~~~~a~a~llt~pGi 331 (416)
..|..++||+..||.-.+.. .. ...+...+...+.+|.+.|+
T Consensus 456 ~~p~~sINyv~aHDgfTL~D~vsy~~khneange~nrdg~~~n~s~N~g~eg~t~~p~i~~~re~~~~~~~~tlllsqG~ 535 (697)
T COG1523 456 RRPSQSINYVTAHDGFTLWDLVSYNHKHNEANGENNRDGHNDNYSWNHGVEGPTGDPFIHAGRERQRTNLLATLLLSQGT 535 (697)
T ss_pred CCccceeeEEeecCCCcHhHhhhhccCCChhhcchhhhhhhhhhccccccccCCCCHHHHHhHHHHHHHHHHHHHhhcCC
Confidence 45778999999999953211 00 00112345666777788999
Q ss_pred eEEecCCcCC--------------------Cc-h---hHHHHHHHHHHHHHhCcccCCCCe
Q 014892 332 PSVFYDHFYD--------------------WG-D---SIHNQIVKLMDVRRQQDIHSRSSI 368 (416)
Q Consensus 332 P~Iy~G~E~g--------------------w~-~---~l~~~~~~Li~lR~~~~~l~~G~~ 368 (416)
||+-.|||++ |+ . .++++.+.||+|||++|+|+...+
T Consensus 536 pml~~gDe~~rtq~gnnNsYcqdn~inwlDW~~~~~~~l~~f~~~lIaLRk~~~af~~~~f 596 (697)
T COG1523 536 PMLLAGDEFGRTQYGNNNAYCQDNEINWLDWSTEANNDLVEFTKGLIALRKAHPAFRRRSF 596 (697)
T ss_pred cccccccccccccccccccccCCcccceeccCccccHHHHHHHHHHHHHhhhcchhcccch
Confidence 9999999963 66 2 799999999999999999988433
|
|
| >KOG2212 consensus Alpha-amylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=279.67 Aligned_cols=358 Identities=20% Similarity=0.329 Sum_probs=262.2
Q ss_pred eeeccCceeEEEeeecCCCCCCcHHHHHhhhhhHHHcCCCEEEeCCCCCCCC--------CCCcccccCCCCCCCCCCHH
Q 014892 22 AVIRNGREILFQGFNWESCKHDWWRNLERKVPDISKSGFTSVWLPPATHSFA--------PEGYLPQNLYSLNSSYGSEH 93 (416)
Q Consensus 22 ~~~~~~~~~~~q~f~~~~~~~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~--------~~GY~~~d~~~id~~~Gt~~ 93 (416)
+.+++++.+|+|.|+|. +-+-..|.-..|.--|+-+|+++|+.|+.. ...|+|+. |+++.+-|.++
T Consensus 22 t~~~~~R~tmVHLFEWK-----W~DiA~ECE~FL~p~G~~gVQVSP~nEn~~~~~~~rPWWeRYQPvS-YKL~tRSGNE~ 95 (504)
T KOG2212|consen 22 TNTQQGRTTIVHLFEWK-----WVDIALECERFLAPKGFGGVQVSPPNENVAIHNPFRPWWERYQPVS-YKLCTRSGNED 95 (504)
T ss_pred chhhcCcceEEEEEEee-----hHHHHHHHHhhcCcCCcceeeecCcchhhhhcCCCCCceeecccce-EEeeccCCCHH
Confidence 56889999999999999 444445556689999999999999998752 13799997 89999999999
Q ss_pred HHHHHHHHHHHCCCEEEEEEccccCcCCC-C----CCCCccc-----ccCC---CCCCCCCCc-------eecCCCCCCC
Q 014892 94 LLKALLHKMKQHKVRAMADIVINHRVGTT-Q----GHGGKYN-----RYDG---IPLSWDEHA-------VTSCTGGLGN 153 (416)
Q Consensus 94 d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~-~----~~~~~~~-----~f~~---~~~~~~~~~-------~~~~~~~~~~ 153 (416)
||+.||+.|.+-|+|+++|+|+|||+... . +..+.+. -|-+ ...+|++.. +.++.+. .
T Consensus 96 eF~dMV~RCN~VGVRiyVDvv~NHM~g~~~~G~~vGt~Gs~~~p~s~SfPGVPYs~~DFn~~kc~~~~~~i~~~Nda--~ 173 (504)
T KOG2212|consen 96 EFRDMVTRCNNVGVRIYVDAVINHMCGNAVSGGTVGTCGSYFNPGSRSFPGVPYSGWDFNDGKCKTGSGDIENYNDA--T 173 (504)
T ss_pred HHHHHHHHhhccceEEEehhhhhhhccccccCCccccccCccCCCCCCCCCCCcccccCCCcccCCCccccccccch--h
Confidence 99999999999999999999999999622 1 1111111 1111 113455421 1122222 2
Q ss_pred CCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcHHHHHHHHHhcCC-----------ceEEEcc
Q 014892 154 GSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGARP-----------IFSVGEY 222 (416)
Q Consensus 154 ~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~~~~~~~~~~~~~-----------~~~vgE~ 222 (416)
.+..|..-++.|||..+..||..+++.+.+++ +.||.|||+||+|||++.-+..+...++. .|++-|+
T Consensus 174 ~V~~C~LVGL~DL~Q~s~~Vr~Kive~L~hLi-dlGVAGFRvDAsKHMwp~Di~~I~~~l~nLnsD~f~s~srpfi~qEV 252 (504)
T KOG2212|consen 174 QVRDCRLVGLLDLAQGSDYVRSKIAEYLNHLI-DIGVAGFRVDASKHMWPGDIKAILDKLHNLNSDWFPSGSKPFIYQEV 252 (504)
T ss_pred hhhcceEeecchhhhcchHHHHHHHHHHHHHH-HhccceeeechhhccChHHHHHHHHHHhhcccccccCCCCceehhhh
Confidence 35678889999999999999999999999999 99999999999999999999999888762 3555565
Q ss_pred cCCCCCCCCCCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHhcCc-hhhhhhhcCCCCCccccccC-cceeccc
Q 014892 223 WDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKGQ-FWRLRDAQGKPPGVMGWWPS-RAVTFLD 300 (416)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~p~-~~~~fl~ 300 (416)
.+.. +++-. -.+|. +...+.+|.+...+..++++. ....+..|+.. +++.|. ++++|++
T Consensus 253 ID~G----gE~v~--------~~dY~----g~G~~TeF~f~~~ig~~~r~~~~~kyL~nwG~~---wGf~~s~~~L~FvD 313 (504)
T KOG2212|consen 253 IDLG----GEPIK--------SSDYF----GNGRVTEFKFGAKLGTVIRKWNKMKYLKNWGEG---WGFMPSDRALVFVD 313 (504)
T ss_pred hhcC----Cceee--------ccccc----CCceeeeeechHHHHHHHhcchhHHHHHhcCCc---cCcCCCcceEEEec
Confidence 5431 11100 00111 244566777777888888554 56677778754 455565 8899999
Q ss_pred CCCCCCCCCC-----C-CCChhhHHHHHHHHhcCC-CeeEEecCCcC----------------------------CCchh
Q 014892 301 NHDTGSTQAH-----W-PFPSNHIMEGYAYILMHP-GIPSVFYDHFY----------------------------DWGDS 345 (416)
Q Consensus 301 nHD~~R~~~~-----~-~~~~~~~~~a~a~llt~p-GiP~Iy~G~E~----------------------------gw~~~ 345 (416)
|||++|-... + -...+++++|.+|||+.| |+|-+...--| ||-++
T Consensus 314 NHDNQR~~gagga~VltYK~~~~YkmA~~FmLA~PyG~~RVMSSFaF~~~D~~PP~~~~~~i~SP~Fn~D~tC~~GWvCE 393 (504)
T KOG2212|consen 314 NHDNQRGHGAGGASVLTYKDARLYKMAVGFMLAHPYGFTRVMSSFAFDVNDWVPPPNNNGVIKSPTFNPDTTCGNGWVCE 393 (504)
T ss_pred cCcccccCCCCcceEEEecchhhhhhhhhhheecccCcchhheeeeeecCCCCCCCCCCcceecceeCCCCcccCceeee
Confidence 9999996543 1 124568999999999999 99998775433 34334
Q ss_pred -HHHHHHHHHHHHHhCcccCCCCeEEEEec-CCEEEEEECCEEEEEEcCCCCC--------CCCCCcEEeeeCCc
Q 014892 346 -IHNQIVKLMDVRRQQDIHSRSSIKILEAQ-SNLYSAIIGDKVCMKIGDGSWC--------PAGKEWTLATSGHK 410 (416)
Q Consensus 346 -l~~~~~~Li~lR~~~~~l~~G~~~~~~~~-~~~~~~~R~~~~lvvinn~~~~--------~~~~~~~~~ls~~~ 410 (416)
--..|++|.++|..- +.-.++-+..+ .+.++|.|+++..+++||.+.. .+.|.+.++.||..
T Consensus 394 HRWrqI~~Mv~FrnAV---~~t~~~~w~d~g~nqIaF~Rg~kGF~A~Nn~~~d~s~~l~T~LPAGtYCDviSG~~ 465 (504)
T KOG2212|consen 394 HRWRQIRNMVNFRNAV---DGTPFTNWYDNGSNQIAFGRGNRGFIAFNNDDWDFSLTLQTGLPAGTYCDVISGDK 465 (504)
T ss_pred chHHHHHHHHhhhhhc---CCccccceeeCCCcEEEEecCCccEEEEeCcchhHHHHHhcCCCCCceeeeecccc
Confidence 458899999999875 33344545544 6799999999999999996532 23478888888753
|
|
| >PRK14511 maltooligosyl trehalose synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-33 Score=293.74 Aligned_cols=85 Identities=21% Similarity=0.275 Sum_probs=80.2
Q ss_pred CCCCCcHHHHHhhhhhHHHcCCCEEEeCCCCCCC--CCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccc
Q 014892 39 SCKHDWWRNLERKVPDISKSGFTSVWLPPATHSF--APEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVIN 116 (416)
Q Consensus 39 ~~~~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~--~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~N 116 (416)
+.++++|++++++|+||++||||+|||+||+++. ++|||++.||+.|||+||+.++|++||++||++||+||+|+|+|
T Consensus 13 ~~~~~tf~~~~~~l~YL~~LGis~IyLsPi~~a~~gs~hGYdv~D~~~idp~lGt~e~f~~Lv~aah~~Gi~VIlDiV~N 92 (879)
T PRK14511 13 FHAGFTFDDAAELVPYFADLGVSHLYLSPILAARPGSTHGYDVVDHTRINPELGGEEGLRRLAAALRAHGMGLILDIVPN 92 (879)
T ss_pred eCCCCCHHHHHHHhHHHHHcCCCEEEECcCccCCCCCCCCCCcCCCCCcCCCCCCHHHHHHHHHHHHHCCCEEEEEeccc
Confidence 4567899999999999999999999999999875 68999999999999999999999999999999999999999999
Q ss_pred cCcCCCC
Q 014892 117 HRVGTTQ 123 (416)
Q Consensus 117 H~~~~~~ 123 (416)
|++.+++
T Consensus 93 H~~~~~~ 99 (879)
T PRK14511 93 HMAVGGP 99 (879)
T ss_pred cccCcCc
Confidence 9999763
|
|
| >PLN03244 alpha-amylase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-32 Score=276.26 Aligned_cols=296 Identities=15% Similarity=0.182 Sum_probs=184.7
Q ss_pred cccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccccCcCCCCCCCCcccccCCCC-CCCCCCceecCCCCCCCCCCC
Q 014892 79 PQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIP-LSWDEHAVTSCTGGLGNGSTG 157 (416)
Q Consensus 79 ~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~~~-~~~~~~~~~~~~~~~~~~~~~ 157 (416)
+++||+++++|||++|||+||++||++||+||||+|+||++.+.... ...|++.+ ..++.. ..+. .
T Consensus 427 vt~fFApssRYGTPeDLK~LVD~aH~~GI~VILDvV~NH~~~d~~~G---L~~fDGt~~~Yf~~~-----~~g~-----~ 493 (872)
T PLN03244 427 VTNFFAASSRYGTPDDFKRLVDEAHGLGLLVFLDIVHSYAAADEMVG---LSLFDGSNDCYFHTG-----KRGH-----H 493 (872)
T ss_pred cCcccccCcccCCHHHHHHHHHHHHHCCCEEEEEecCccCCCccccc---hhhcCCCccceeccC-----CCCc-----c
Confidence 78999999999999999999999999999999999999999865311 01122211 011110 0000 0
Q ss_pred CCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCc-------------------------HHHHHHHHHh
Q 014892 158 DNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYS-------------------------AKYVKEYIEG 212 (416)
Q Consensus 158 ~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~-------------------------~~~~~~~~~~ 212 (416)
..| +...+|+.+|+||++|++++++|+++|||||||+|++..|- ..|++.+.+.
T Consensus 494 ~~W-Gs~~fnyg~~EVr~FLLsna~yWleEyhIDGFRfDaVtSMLY~d~G~~~f~g~~~~y~n~~~d~dAv~fL~laN~~ 572 (872)
T PLN03244 494 KHW-GTRMFKYGDLDVLHFLISNLNWWITEYQIDGFQFHSLASMIYTHNGFASFNGDLDDYCNQYVDKDALMYLILANEI 572 (872)
T ss_pred CCC-CCceecCCCHHHHHHHHHHHHHHHHHhCcCcceeecchhheeeccccccccCCccccccccCCchHHHHHHHHHHH
Confidence 111 23568999999999999999999999999999999983221 2355555444
Q ss_pred c---CC-ceEEEcccCCCCCCCCCCCCccchhhHhHhhhhccCCCcccccCchh----hHHHHHHhcC---chhhhhhhc
Q 014892 213 A---RP-IFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTT----KGILQEAVKG---QFWRLRDAQ 281 (416)
Q Consensus 213 ~---~~-~~~vgE~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~----~~~l~~~~~~---~~~~~~~~~ 281 (416)
+ .| .++|||-..+-+ .|..-... | ...||+.. .....+.+.. ..+.+-...
T Consensus 573 ih~~~P~~itIAEDsS~~P---------------~vt~Pv~~-G--GLGFDYKWnMgwmdd~lkylk~~pderw~~~~It 634 (872)
T PLN03244 573 LHALHPKIITIAEDATYYP---------------GLCEPTSQ-G--GLGFDYYVNLSAPDMWLDFLDNIPDHEWSMSKIV 634 (872)
T ss_pred HHHhCCCeEEEEEcCCCCc---------------CccccCCC-C--CCCccceecCcchHHHHHHHHhCCCcccCHHHHh
Confidence 3 45 678999654311 11111111 1 12344432 2223333311 112111111
Q ss_pred CCCCCccccccCcceecccCCCCC----CCCC-CC-------CCC--------hhhHHHHHHHHhcCCCee-EEecCCcC
Q 014892 282 GKPPGVMGWWPSRAVTFLDNHDTG----STQA-HW-------PFP--------SNHIMEGYAYILMHPGIP-SVFYDHFY 340 (416)
Q Consensus 282 ~~~~~~~~~~p~~~~~fl~nHD~~----R~~~-~~-------~~~--------~~~~~~a~a~llt~pGiP-~Iy~G~E~ 340 (416)
.. ...-.......+.|.||||+. +... .+ ... ....|++.++++++||.| ++|+|.||
T Consensus 635 fs-L~~nrr~~ek~~aYsESHDqaLvGdKTlaf~l~d~~~y~~~~~~~vv~Rg~aLhKMiRllt~~~~G~kkLnFMGNEF 713 (872)
T PLN03244 635 ST-LIANKEYADKMLSYAENHNQSISGGRSFAEILFGAIDEDPLGGKELLDRGCSLHKMIRLITFTIGGHAYLNFMGNEF 713 (872)
T ss_pred hh-hhcccCCcceEEEEecccceeccccchHHhhhcccccccccccchhhhhhhHHHHHHHHHHHHccCccceeeccccc
Confidence 00 000011223678999999993 2111 00 000 012355666788899988 79999998
Q ss_pred C------C----------------c-------hhHHHHHHHHHHHHHhCcccCCCCeEEEEe--cCCEEEEEECCEEEEE
Q 014892 341 D------W----------------G-------DSIHNQIVKLMDVRRQQDIHSRSSIKILEA--QSNLYSAIIGDKVCMK 389 (416)
Q Consensus 341 g------w----------------~-------~~l~~~~~~Li~lR~~~~~l~~G~~~~~~~--~~~~~~~~R~~~~lvv 389 (416)
| | + +.|.+++|.|++|++++++|..|...+... ++.|+||.|+ .+|+|
T Consensus 714 Ghpe~~dfPr~gN~~s~~~arrdW~Lld~~~hk~L~~FdrdLn~Ly~~~~aL~~gf~wI~~~d~e~kVIAF~R~-~LLfV 792 (872)
T PLN03244 714 GHPERIEFPMPSNNFSFSLANRCWDLLENEVHHHLFSFDKDLMDLDENEGILSRGLPNIHHVKDAAMVISFMRG-PFLFI 792 (872)
T ss_pred CCchheeccccCCCccccccccCccccCChhHHHHHHHHHHHHHHHhcCcccccCCcEEeeecCCCCEEEEEec-CEEEE
Confidence 5 2 1 247789999999999999998776544433 3569999997 58888
Q ss_pred EcCCCC---------CCCCCCcEEeeeC
Q 014892 390 IGDGSW---------CPAGKEWTLATSG 408 (416)
Q Consensus 390 inn~~~---------~~~~~~~~~~ls~ 408 (416)
+|.+.. .|..|.|+.+|+.
T Consensus 793 fNF~P~~sy~dYrIGVp~~G~Y~eILNS 820 (872)
T PLN03244 793 FNFHPSNSYEGYDVGVEEAGEYQIILNS 820 (872)
T ss_pred EeCCCCCCccCCEECCCCCCeEEEEEeC
Confidence 888642 1456789988864
|
|
| >KOG0470 consensus 1,4-alpha-glucan branching enzyme/starch branching enzyme II [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-32 Score=273.76 Aligned_cols=165 Identities=22% Similarity=0.362 Sum_probs=126.8
Q ss_pred eccCceeEEEeeecCCCCC----Cc---HHHHHhh-hhhHHHcCCCEEEeCCCCCCC---CCCCcccccCCCCCCCCCCH
Q 014892 24 IRNGREILFQGFNWESCKH----DW---WRNLERK-VPDISKSGFTSVWLPPATHSF---APEGYLPQNLYSLNSSYGSE 92 (416)
Q Consensus 24 ~~~~~~~~~q~f~~~~~~~----G~---~~gi~~~-LdyLk~LGv~~I~L~Pi~~~~---~~~GY~~~d~~~id~~~Gt~ 92 (416)
....+=.||..=++.++.+ -+ ++|.++| |++||+||+|+|+||||+++. ..+||.|++||++..+|||.
T Consensus 225 ~P~~sL~IYE~HVrgfS~~E~~v~~~~gY~~FteKvlphlK~LG~NaiqLmpi~Ef~~~~~s~GY~~~nFFapssrYgt~ 304 (757)
T KOG0470|consen 225 IPESSLRIYELHVRGFSSHESKVNTRGGYLGFTEKVLPHLKKLGYNAIQLMPIFEFGHYYASWGYQVTNFFAPSSRYGTP 304 (757)
T ss_pred CChhheEEEEEeeccccCCCCccccccchhhhhhhhhhHHHHhCccceEEeehhhhhhhhhccCcceeEeecccccccCC
Confidence 3444556777777655432 13 9999999 999999999999999999994 36899999999999999999
Q ss_pred H------HHHHHHHHHHHCCCEEEEEEccccCcCCCCCCCCcccccCCCC--CCCCCCceecCCCCCCCCCCCCCCCCCC
Q 014892 93 H------LLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIP--LSWDEHAVTSCTGGLGNGSTGDNFHGVP 164 (416)
Q Consensus 93 ~------d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (416)
+ |||+||++||..||.|+||||.||++.+.. ..+..|++.. .+++. +..+. .+.....
T Consensus 305 ~s~~ri~efK~lVd~aHs~GI~VlLDVV~sHaa~n~~---d~l~~fdGid~~~Yf~~-------~~r~~----h~~~~~r 370 (757)
T KOG0470|consen 305 ESPCRINEFKELVDKAHSLGIEVLLDVVHSHAAKNSK---DGLNMFDGIDNSVYFHS-------GPRGY----HNSWCSR 370 (757)
T ss_pred CcccchHHHHHHHHHHhhCCcEEehhhhhhhcccCcC---CcchhccCcCCceEEEe-------CCccc----ccccccc
Confidence 9 999999999999999999999999999332 2223344311 01111 11110 1112344
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCc
Q 014892 165 NIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYS 202 (416)
Q Consensus 165 dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~ 202 (416)
-+|+.+|+|+++|++.++||+.||+|||||+|.+..|-
T Consensus 371 ~fn~~~~~V~rflL~nLr~WVtEY~vDGFRFD~~ssm~ 408 (757)
T KOG0470|consen 371 LFNYNHPVVLRFLLSNLRWWVTEYHVDGFRFDLVSSML 408 (757)
T ss_pred cccCCCHHHHHHHHHHHHHHHHheeccceEEcchhhhh
Confidence 58999999999999999999999999999999886553
|
|
| >smart00642 Aamy Alpha-amylase domain | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.6e-28 Score=210.25 Aligned_cols=92 Identities=21% Similarity=0.350 Sum_probs=87.3
Q ss_pred eeEEEeeecCCCC-CCcHHHHHhhhhhHHHcCCCEEEeCCCCCCC----CCCCcccccCCCCCCCCCCHHHHHHHHHHHH
Q 014892 29 EILFQGFNWESCK-HDWWRNLERKVPDISKSGFTSVWLPPATHSF----APEGYLPQNLYSLNSSYGSEHLLKALLHKMK 103 (416)
Q Consensus 29 ~~~~q~f~~~~~~-~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~----~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH 103 (416)
+++.|.|.|..+. .|||+||+++|+||++||||+|||+||++++ ++|||++.||++++|+|||++||++||++||
T Consensus 1 qi~~~~F~~~~~~~~G~~~gi~~~l~yl~~lG~~~I~l~Pi~~~~~~~~~~~gY~~~d~~~i~~~~Gt~~d~~~lv~~~h 80 (166)
T smart00642 1 QIYPDRFADGNGDGGGDLQGIIEKLDYLKDLGVTAIWLSPIFESPQGYPSYHGYDISDYKQIDPRFGTMEDFKELVDAAH 80 (166)
T ss_pred CeeeccccCCCCCCCcCHHHHHHHHHHHHHCCCCEEEECcceeCCCCCCCCCCcCccccCCCCcccCCHHHHHHHHHHHH
Confidence 4789999997665 4899999999999999999999999999998 6899999999999999999999999999999
Q ss_pred HCCCEEEEEEccccCcC
Q 014892 104 QHKVRAMADIVINHRVG 120 (416)
Q Consensus 104 ~~Gi~VilD~V~NH~~~ 120 (416)
++||+||+|+|+||++.
T Consensus 81 ~~Gi~vilD~V~NH~~~ 97 (166)
T smart00642 81 ARGIKVILDVVINHTSD 97 (166)
T ss_pred HCCCEEEEEECCCCCCC
Confidence 99999999999999987
|
|
| >PRK14507 putative bifunctional 4-alpha-glucanotransferase/malto-oligosyltrehalose synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.1e-22 Score=221.83 Aligned_cols=83 Identities=22% Similarity=0.287 Sum_probs=78.5
Q ss_pred CCCCCCcHHHHHhhhhhHHHcCCCEEEeCCCCCCC--CCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEcc
Q 014892 38 ESCKHDWWRNLERKVPDISKSGFTSVWLPPATHSF--APEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVI 115 (416)
Q Consensus 38 ~~~~~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~--~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~ 115 (416)
++..+++|++++++||||++||||+|||+||+++. ++|||++.||+.|+|.||+.++|++||++||++||+||||+|+
T Consensus 750 q~~~~~tf~~~~~~l~Yl~~LGv~~i~lsPi~~a~~gs~hGYdv~D~~~idp~lG~~edf~~Lv~~ah~~Gi~vilDiV~ 829 (1693)
T PRK14507 750 QFHKDFTFADAEAILPYLAALGISHVYASPILKARPGSTHGYDIVDHSQINPEIGGEEGFERFCAALKAHGLGQLLDIVP 829 (1693)
T ss_pred EeCCCCCHHHHHHHhHHHHHcCCCEEEECCCcCCCCCCCCCCCCCCCCccCcccCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 44567899999999999999999999999999963 6899999999999999999999999999999999999999999
Q ss_pred ccCcC
Q 014892 116 NHRVG 120 (416)
Q Consensus 116 NH~~~ 120 (416)
||++.
T Consensus 830 NH~~~ 834 (1693)
T PRK14507 830 NHMGV 834 (1693)
T ss_pred cccCC
Confidence 99995
|
|
| >COG3280 TreY Maltooligosyl trehalose synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.5e-19 Score=182.05 Aligned_cols=78 Identities=21% Similarity=0.306 Sum_probs=75.6
Q ss_pred cHHHHHhhhhhHHHcCCCEEEeCCCCCCC--CCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccccCcCC
Q 014892 44 WWRNLERKVPDISKSGFTSVWLPPATHSF--APEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGT 121 (416)
Q Consensus 44 ~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~--~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~ 121 (416)
+|....+.||||++|||+++|++|||... |.|||||+|+..|+|.+|+.+.|.+||.++|++||.+|+|+|+|||+..
T Consensus 17 tF~~A~~~l~yl~~LGIShLY~SPIftA~pGStHGYDVvD~t~InPeLGG~egl~rLvaalk~~GlGlI~DIVPNHMav~ 96 (889)
T COG3280 17 TFADARALLDYLADLGISHLYLSPIFTARPGSTHGYDVVDPTEINPELGGEEGLERLVAALKSRGLGLIVDIVPNHMAVG 96 (889)
T ss_pred CHHHHHHhhHHHHhcCchheeccchhhcCCCCCCCccCCCccccChhhcChHHHHHHHHHHHhcCCceEEEecccchhcc
Confidence 79999999999999999999999999875 6899999999999999999999999999999999999999999999987
|
|
| >TIGR01531 glyc_debranch glycogen debranching enzymye | Back alignment and domain information |
|---|
Probab=99.77 E-value=6.1e-17 Score=175.13 Aligned_cols=81 Identities=19% Similarity=0.325 Sum_probs=76.5
Q ss_pred CcHHHHHhhhhhHHHcCCCEEEeCCCCC-CCCCCCcccccCCCCCCCCC----CHHHHHHHHHHHHHC-CCEEEEEEccc
Q 014892 43 DWWRNLERKVPDISKSGFTSVWLPPATH-SFAPEGYLPQNLYSLNSSYG----SEHLLKALLHKMKQH-KVRAMADIVIN 116 (416)
Q Consensus 43 G~~~gi~~~LdyLk~LGv~~I~L~Pi~~-~~~~~GY~~~d~~~id~~~G----t~~d~~~Lv~~aH~~-Gi~VilD~V~N 116 (416)
|.|....++|+|||+||+|+|||+||++ +.+.|.|++.||+.|||.|| +.+||++||+++|++ ||+||+|+|+|
T Consensus 129 G~~~~w~~~L~~ik~lGyN~IhftPI~~~G~SnS~Ysi~Dyl~idP~~~~~~~~~~d~~~lV~~~h~~~Gm~~ilDvV~N 208 (1464)
T TIGR01531 129 GPLSEWEPRLRVAKEKGYNMIHFTPLQELGGSNSCYSLYDQLQLNQHFKSQKDGKNDVQALVEKLHRDWNVLSITDIVFN 208 (1464)
T ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCccCCCCCCCccccchhhcChhhcccCCcHHHHHHHHHHHHHhcCCEEEEEeeec
Confidence 7899999999999999999999999995 45789999999999999994 899999999999997 99999999999
Q ss_pred cCcCCCC
Q 014892 117 HRVGTTQ 123 (416)
Q Consensus 117 H~~~~~~ 123 (416)
||+.+++
T Consensus 209 HTa~ds~ 215 (1464)
T TIGR01531 209 HTANNSP 215 (1464)
T ss_pred ccccCCH
Confidence 9999995
|
glycogen debranching enzyme possesses two different catalytic activities; oligo-1,4--1,4-glucantransferase (EC 2.4.1.25) and amylo-1,6-glucosidase (EC 3.2.1.33). Site directed mutagenesis studies in S. cerevisiae indicate that the transferase and glucosidase activities are independent and located in different regions of the polypeptide chain. Proteins in this model belong to the larger alpha-amylase family. The model covers eukaryotic proteins with a seed composed of human, nematode and yeast sequences. Yeast seed sequence is well characterized. The model is quite rigorous; either query sequence yields large bit score or it fails to hit the model altogether. There doesn't appear to be any middle ground. |
| >PF14872 GHL5: Hypothetical glycoside hydrolase 5 | Back alignment and domain information |
|---|
Probab=99.33 E-value=6.2e-11 Score=118.53 Aligned_cols=152 Identities=14% Similarity=0.153 Sum_probs=111.6
Q ss_pred eeeccCceeEEEeeecCCCCCCcHHHHHhhhhhHHH---------------cCCCEEEeCCCCCCC--------------
Q 014892 22 AVIRNGREILFQGFNWESCKHDWWRNLERKVPDISK---------------SGFTSVWLPPATHSF-------------- 72 (416)
Q Consensus 22 ~~~~~~~~~~~q~f~~~~~~~G~~~gi~~~LdyLk~---------------LGv~~I~L~Pi~~~~-------------- 72 (416)
+++.+. .-|+|+=..+.+.+|+|.|+++.-..|.+ .|+++|+|+||=+..
T Consensus 173 ~rv~~P-~nILQiHv~TAsp~GtlaGLT~iyqria~K~~~g~pLtp~E~ny~GYDAvQLLPiEPtieyr~e~~~~h~Ff~ 251 (811)
T PF14872_consen 173 PRVPAP-RNILQIHVGTASPEGTLAGLTRIYQRIADKLAAGEPLTPAEENYVGYDAVQLLPIEPTIEYRAENEPGHEFFS 251 (811)
T ss_pred cccCCC-ceeEEEecCCCCCCcchHHHHHHHHHHHHHHhcCCCCChhHHhcccccceeeeccCCcceeccccCCCCceee
Confidence 334443 56999999999999999999999888865 799999999995432
Q ss_pred -------------------------------CCCCccccc--CCCCCCCC---CCHHHHHHHHHHHHH---CCCEEEEEE
Q 014892 73 -------------------------------APEGYLPQN--LYSLNSSY---GSEHLLKALLHKMKQ---HKVRAMADI 113 (416)
Q Consensus 73 -------------------------------~~~GY~~~d--~~~id~~~---Gt~~d~~~Lv~~aH~---~Gi~VilD~ 113 (416)
..|||++.= .-+++|.. +.++|+-.||..+|. ..|+||+|+
T Consensus 252 ~~~~d~~~~~~~~~~~~~~~~v~v~L~kPdtqNWGYDv~I~GsaAtNPalL~TlRPDElVdfiatLHnFp~gPIqvIyDl 331 (811)
T PF14872_consen 252 IRPEDEDELDPETEGVHEDGDVTVTLRKPDTQNWGYDVVILGSAATNPALLETLRPDELVDFIATLHNFPTGPIQVIYDL 331 (811)
T ss_pred ecccccccccccccccccCceEEEEecCCCccccCcceeeeccCCCCHHHHhcCCcHHHHHHHHHHhcCCCCCeEEEEee
Confidence 247777632 23444433 347999999999997 579999999
Q ss_pred ccccCcCCCCC-CCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCe
Q 014892 114 VINHRVGTTQG-HGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQD 192 (416)
Q Consensus 114 V~NH~~~~~~~-~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDG 192 (416)
|+.|.-..+.. -++.| ...++= -.-|+|+.+|.||.-+.+.=+.=+ ++|+||
T Consensus 332 VyGHADNQ~~~LLn~~f---------------lkGPnM-----------YGQdlnhq~P~VRAILLEmQRRK~-n~GaDG 384 (811)
T PF14872_consen 332 VYGHADNQALDLLNRRF---------------LKGPNM-----------YGQDLNHQNPVVRAILLEMQRRKI-NTGADG 384 (811)
T ss_pred ecccccchhhHhhhhhh---------------ccCCcc-----------ccccccccChHHHHHHHHHHHhhc-ccCCce
Confidence 99998774421 11111 000000 024799999999999999887776 999999
Q ss_pred EEecccCCC
Q 014892 193 FRFDFARGY 201 (416)
Q Consensus 193 fRlD~a~~~ 201 (416)
+|+|.+...
T Consensus 385 IRVDGgQDF 393 (811)
T PF14872_consen 385 IRVDGGQDF 393 (811)
T ss_pred eEecccccc
Confidence 999998543
|
|
| >PF14701 hDGE_amylase: glucanotransferase domain of human glycogen debranching enzyme | Back alignment and domain information |
|---|
Probab=99.00 E-value=8e-10 Score=108.48 Aligned_cols=84 Identities=14% Similarity=0.248 Sum_probs=75.2
Q ss_pred CcHHHHHhhhhhHHHcCCCEEEeCCCCCCC-CCCCcccccCCCCCCCCCC------HHHHHHHHHHHH-HCCCEEEEEEc
Q 014892 43 DWWRNLERKVPDISKSGFTSVWLPPATHSF-APEGYLPQNLYSLNSSYGS------EHLLKALLHKMK-QHKVRAMADIV 114 (416)
Q Consensus 43 G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~-~~~GY~~~d~~~id~~~Gt------~~d~~~Lv~~aH-~~Gi~VilD~V 114 (416)
|.+..=.++|..++++|+|.|+++|+.+-+ |...|.+.|...++|.+.. .++++++|++++ +.||.+|.|+|
T Consensus 19 G~~~~W~~~l~~~~~~GYNmIHftPlq~~G~S~S~YSI~Dql~~~~~~~~~~~~~~~~~v~~~v~~~~~~~~ll~~~DvV 98 (423)
T PF14701_consen 19 GPFSDWEKHLKVISEKGYNMIHFTPLQERGESNSPYSIYDQLKFDPDFFPPGKESTFEDVKEFVKEAEKKYGLLSMTDVV 98 (423)
T ss_pred CCHhHHHHHHHHHHHcCCcEEEecccccCCCCCCCccccchhhcChhhcCCCccccHHHHHHHHHHHHHHcCceEEEEEe
Confidence 568888899999999999999999999986 4679999999999998755 379999999995 79999999999
Q ss_pred cccCcCCCCCCC
Q 014892 115 INHRVGTTQGHG 126 (416)
Q Consensus 115 ~NH~~~~~~~~~ 126 (416)
+|||+.+++|-.
T Consensus 99 ~NHtA~nS~Wl~ 110 (423)
T PF14701_consen 99 LNHTANNSPWLR 110 (423)
T ss_pred eccCcCCChHHH
Confidence 999999998743
|
|
| >PF02324 Glyco_hydro_70: Glycosyl hydrolase family 70; InterPro: IPR003318 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=98.95 E-value=2.3e-08 Score=101.30 Aligned_cols=204 Identities=18% Similarity=0.275 Sum_probs=123.8
Q ss_pred CCCCCCcCCCCCHHHHHHHHHHHHHHHH---------hcCCCeEEecccCCCcHHHHHHHHHhcC-------------Cc
Q 014892 159 NFHGVPNIDHTQHFVRKDIIAWLRWLRN---------TVGFQDFRFDFARGYSAKYVKEYIEGAR-------------PI 216 (416)
Q Consensus 159 ~~~~~~dln~~~~~v~~~l~~~~~~w~~---------~~gvDGfRlD~a~~~~~~~~~~~~~~~~-------------~~ 216 (416)
.|.-..|++-+||.|+.+...|+.|++. +..+||+|+|||.+++.+++.-..+-.+ ..
T Consensus 139 EfLLaNDVDNSNPvVQAEqLNwl~yLmN~GsI~~~d~daNFDgiRVDAvDNVdADlLqia~dyfkaaYgv~~~~a~An~H 218 (809)
T PF02324_consen 139 EFLLANDVDNSNPVVQAEQLNWLHYLMNFGSITANDPDANFDGIRVDAVDNVDADLLQIAGDYFKAAYGVDKNDANANKH 218 (809)
T ss_dssp S--SSEEE-TTSHHHHHHHHHHHHHHHTHHHHHHS-TTSS--EEEETTGGGS-THHHHHHHHHHHHHH-TTTBHHHHCTC
T ss_pred eeEEeccccCCCchhhHHHHHHHHHHhhccccccCCCCCCcccEEeecccccCHHHHHHHHHHHHHHhCCCcChhhHhhh
Confidence 3455568999999999999999999995 6679999999999999988764433211 24
Q ss_pred eEEEcccCCCCCCCCCCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHhcCc------hhhhhhhcC--CCCCcc
Q 014892 217 FSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKGQ------FWRLRDAQG--KPPGVM 288 (416)
Q Consensus 217 ~~vgE~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~~~~------~~~~~~~~~--~~~~~~ 288 (416)
+.+=|.|+.. =..|+...++..-.+|.+++..+...+... ...+.+..- +.....
T Consensus 219 lSilE~ws~n-----------------d~~y~~~~g~~qL~mD~~~~~~l~~sL~~~~~~R~~l~~li~~slvnR~~d~~ 281 (809)
T PF02324_consen 219 LSILEAWSSN-----------------DPDYVKDTGNPQLTMDNGLRLALLYSLTRPSNNRSGLEPLITNSLVNRSNDST 281 (809)
T ss_dssp --EESSSTTT-----------------HHHHHHHTTSSSBEEEHHHHHHHHHHTSS-TTC---CTHHHHSSSSECSEE--
T ss_pred heeeeccccC-----------------ChHHHhcCCCceeeecHHHHHHHHHHhcCCccccccHHHHhhhhhcccccCCc
Confidence 5677999762 113444445666788999998888886221 223333210 000000
Q ss_pred ccccCcceecccCCCCCC-----------CC---CCCCC-----------------------ChhhHHHHHHHHhcCC-C
Q 014892 289 GWWPSRAVTFLDNHDTGS-----------TQ---AHWPF-----------------------PSNHIMEGYAYILMHP-G 330 (416)
Q Consensus 289 ~~~p~~~~~fl~nHD~~R-----------~~---~~~~~-----------------------~~~~~~~a~a~llt~p-G 330 (416)
...+.....|+.+||.+- +. ..+.. ..-.+..++|+|||-. -
T Consensus 282 en~a~pNYsFvrAHDsevQ~vI~~II~~~i~~~~dg~t~t~d~l~qAf~iYnaD~~~~~K~Yt~yNiPsaYAllLtNKDT 361 (809)
T PF02324_consen 282 ENEAQPNYSFVRAHDSEVQTVIAQIIKDKINPNSDGLTFTLDQLKQAFEIYNADQKKTDKKYTQYNIPSAYALLLTNKDT 361 (809)
T ss_dssp SSESS-EEEES-BSSTTTHHHHHHHHHHHT-TTTCTTC--HHHHHHHHHHHHHHHTSSS-SSS-S-HHHHHHHHHH-SSS
T ss_pred CCcccCceeeeecccHHHHHHHHHHHHhhcCCcccCccCCHHHHHHHHHHHHHHHHHhhhhhhccccHHHHHHHHhCCCC
Confidence 011224578999999951 10 00000 0113678999999865 9
Q ss_pred eeEEecCCcCC-------CchhHHHHHHHHHHHHHhCcccCCCCeEEEE-----ecCCEEEEEE
Q 014892 331 IPSVFYDHFYD-------WGDSIHNQIVKLMDVRRQQDIHSRSSIKILE-----AQSNLYSAII 382 (416)
Q Consensus 331 iP~Iy~G~E~g-------w~~~l~~~~~~Li~lR~~~~~l~~G~~~~~~-----~~~~~~~~~R 382 (416)
||.|||||-|- -..+.++.|..|++-|.++ ..|....-. .+.+++.-.|
T Consensus 362 VPRVYYGDLYtDdGQYMa~KSpYyDaI~tLLKaRikY---vaGGQtM~~~~~~~~~~~vLtSVR 422 (809)
T PF02324_consen 362 VPRVYYGDLYTDDGQYMATKSPYYDAITTLLKARIKY---VAGGQTMAVTYLNGDNSGVLTSVR 422 (809)
T ss_dssp EEEEEHHHHBESSSSTTTSB-TTHHHHHHHHHHHHHH-----S-EEEEE--EEETTTSEEEEEE
T ss_pred CceEEecccccccchhhhhcCchHHHHHHHHHHHHHh---hcCCceeeeecccCCCCceEEEEe
Confidence 99999998763 3457899999999999999 445444333 2346888887
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glucosyltransferases or sucrose 6-glycosyl transferases (GTF-S) (2.4.1.5 from EC, GH70 from CAZY) catalyse the transfer of D-glucopyramnosyl units from sucrose onto acceptor molecules []. This signature roughly corresponds to the N-terminal catalytic domain of the enzyme. Members of this group also contain the putative cell wall binding repeat (IPR002479 from INTERPRO).; GO: 0009250 glucan biosynthetic process; PDB: 3AIE_G 3AIB_D 3AIC_E 3TTQ_A 3TTO_D 3KLL_A 3KLK_A 3HZ3_A. |
| >PF02324 Glyco_hydro_70: Glycosyl hydrolase family 70; InterPro: IPR003318 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=98.54 E-value=1.8e-07 Score=95.05 Aligned_cols=99 Identities=18% Similarity=0.271 Sum_probs=66.6
Q ss_pred eeeccCceeEEEeeec-----CCCCCCcHHHHHhhhhhHHHcCCCEEEeCCCCCCCC---------CCCcccccCCCCC-
Q 014892 22 AVIRNGREILFQGFNW-----ESCKHDWWRNLERKVPDISKSGFTSVWLPPATHSFA---------PEGYLPQNLYSLN- 86 (416)
Q Consensus 22 ~~~~~~~~~~~q~f~~-----~~~~~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~---------~~GY~~~d~~~id- 86 (416)
+..+=.+.|||.+|-- +.+.+=+-.-|.+..+-+|++|||..||.|-+.+.. ..||+-+|-|.+.
T Consensus 558 snAALDSqvIYEgFSNFQ~~~t~~~eytN~~IA~Na~lFk~wGITsFemAPQY~Ss~D~tFLDSiiqNGYAFtDRYDLg~ 637 (809)
T PF02324_consen 558 SNAALDSQVIYEGFSNFQDFPTTPSEYTNVVIAKNADLFKSWGITSFEMAPQYRSSTDGTFLDSIIQNGYAFTDRYDLGM 637 (809)
T ss_dssp ESHHHHT-EEEE---TTB---SSGGGSHHHHHHHTHHHHHHTTEEEEE----S-B--SSSSHHHHTT-SSSBS-TT-SSS
T ss_pred echhhhcchhhccccccccCCCChHHHHHHHHHHhHHHHHhcCcceeeeCcceecCCCCcchhhHhhcCccccchhhhcC
Confidence 3344456899999862 111223678899999999999999999999998752 3799999999885
Q ss_pred ---CCCCCHHHHHHHHHHHHHCCCEEEEEEccccCcC
Q 014892 87 ---SSYGSEHLLKALLHKMKQHKVRAMADIVINHRVG 120 (416)
Q Consensus 87 ---~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~ 120 (416)
..||+.+||+..|+++|+.||+||.|+|++.+-.
T Consensus 638 s~ptKYGs~~dL~~AikALH~~GiqviaDwVpdQiYn 674 (809)
T PF02324_consen 638 SKPTKYGSVEDLRNAIKALHAAGIQVIADWVPDQIYN 674 (809)
T ss_dssp SS-BTTB-HHHHHHHHHHHHHTT-EEEEEE-TSEE--
T ss_pred CCCCCCCCHHHHHHHHHHHHHcCcchhhhhchHhhhC
Confidence 7899999999999999999999999999997754
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glucosyltransferases or sucrose 6-glycosyl transferases (GTF-S) (2.4.1.5 from EC, GH70 from CAZY) catalyse the transfer of D-glucopyramnosyl units from sucrose onto acceptor molecules []. This signature roughly corresponds to the N-terminal catalytic domain of the enzyme. Members of this group also contain the putative cell wall binding repeat (IPR002479 from INTERPRO).; GO: 0009250 glucan biosynthetic process; PDB: 3AIE_G 3AIB_D 3AIC_E 3TTQ_A 3TTO_D 3KLL_A 3KLK_A 3HZ3_A. |
| >PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function | Back alignment and domain information |
|---|
Probab=98.50 E-value=7.7e-07 Score=85.83 Aligned_cols=140 Identities=13% Similarity=0.142 Sum_probs=80.4
Q ss_pred cHHHHHhhhhhHHHcCCCEEEeCCCCCCCC--CCCcccccCCCCCCCCC--CHHHHHHHHHHHHHCCCEEEEEEccccCc
Q 014892 44 WWRNLERKVPDISKSGFTSVWLPPATHSFA--PEGYLPQNLYSLNSSYG--SEHLLKALLHKMKQHKVRAMADIVINHRV 119 (416)
Q Consensus 44 ~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~--~~GY~~~d~~~id~~~G--t~~d~~~Lv~~aH~~Gi~VilD~V~NH~~ 119 (416)
+-+.+.+.|+.|+++|+|+|.+-=-..... ..-+.|..-+......+ +.+=|+.+|++||++||+|..=+.+...+
T Consensus 17 ~~~~~~~~l~~l~~~~~N~V~~qVr~~gda~Y~S~~~p~s~~~~g~~~~~pg~DpL~~~I~eaHkrGlevHAW~~~~~~~ 96 (311)
T PF02638_consen 17 SKEQIDEMLDDLKSAGFNAVFVQVRPRGDALYPSDIEPWSGYLTGKQGKDPGFDPLEFMIEEAHKRGLEVHAWFRVGFNA 96 (311)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEEEeCcEEEecccccccccccCCCCCCCCCccHHHHHHHHHHHcCCEEEEEEEeecCC
Confidence 467899999999999999998732111110 01111211111111111 25669999999999999999765443322
Q ss_pred CCCC-CCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEec
Q 014892 120 GTTQ-GHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFD 196 (416)
Q Consensus 120 ~~~~-~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD 196 (416)
.... .......++.....+| ...+.++ ..+..-||-.+|+||+++++.++-.++.|.|||+.+|
T Consensus 97 ~~~~~~~~~~p~~~~~~~~~~----~~~~~~~---------~~~~~~lnP~~PeVr~~i~~~v~Eiv~~YdvDGIhlD 161 (311)
T PF02638_consen 97 PDVSHILKKHPEWFAVNHPGW----VRTYEDA---------NGGYYWLNPGHPEVRDYIIDIVKEIVKNYDVDGIHLD 161 (311)
T ss_pred CchhhhhhcCchhheecCCCc----eeecccC---------CCCceEECCCCHHHHHHHHHHHHHHHhcCCCCeEEec
Confidence 2100 0000000110000001 1111000 1223348999999999999999999999999999999
|
|
| >PF14871 GHL6: Hypothetical glycosyl hydrolase 6 | Back alignment and domain information |
|---|
Probab=98.38 E-value=5.8e-06 Score=69.24 Aligned_cols=125 Identities=14% Similarity=0.170 Sum_probs=77.6
Q ss_pred HhhhhhHHHcCCCEEEeCCCCCCCCCCC--cccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccc--cC-cCCCC
Q 014892 49 ERKVPDISKSGFTSVWLPPATHSFAPEG--YLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVIN--HR-VGTTQ 123 (416)
Q Consensus 49 ~~~LdyLk~LGv~~I~L~Pi~~~~~~~G--Y~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~N--H~-~~~~~ 123 (416)
.+-+++||++|+|+|-+.- .+-|| |-|+......|.++ .+-|+++|++||++||+|+.=+-++ .. ...||
T Consensus 3 ~~~~~~lk~~~v~si~i~a----~~h~g~ayYPt~~~~~hp~L~-~Dllge~v~a~h~~Girv~ay~~~~~d~~~~~~HP 77 (132)
T PF14871_consen 3 EQFVDTLKEAHVNSITIFA----KCHGGYAYYPTKVGPRHPGLK-RDLLGEQVEACHERGIRVPAYFDFSWDEDAAERHP 77 (132)
T ss_pred HHHHHHHHHhCCCEEEEEc----ccccEEEEccCCCCcCCCCCC-cCHHHHHHHHHHHCCCEEEEEEeeecChHHHHhCC
Confidence 4568899999999998742 11233 55666667788888 7889999999999999999644443 11 11222
Q ss_pred CCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecc
Q 014892 124 GHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDF 197 (416)
Q Consensus 124 ~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~ 197 (416)
+|.-. ..+|...........+...+...+|. ++++++.++-.++.|.+||+=+|.
T Consensus 78 --------------eW~~~----~~~G~~~~~~~~~~~~~~~~c~ns~Y-~e~~~~~i~Ei~~~y~~DGiF~D~ 132 (132)
T PF14871_consen 78 --------------EWFVR----DADGRPMRGERFGYPGWYTCCLNSPY-REFLLEQIREILDRYDVDGIFFDI 132 (132)
T ss_pred --------------ceeeE----CCCCCCcCCCCcCCCCceecCCCccH-HHHHHHHHHHHHHcCCCCEEEecC
Confidence 22210 11111000000001112223344454 589999999999899999998873
|
|
| >PF07821 Alpha-amyl_C2: Alpha-amylase C-terminal beta-sheet domain; InterPro: IPR012850 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=98.23 E-value=4.6e-06 Score=58.64 Aligned_cols=53 Identities=58% Similarity=1.072 Sum_probs=43.9
Q ss_pred CCCCeEEEEecCCEEEEEECCEEEEEEcCCCCCCCCCCcEEeeeCCceEEeeC
Q 014892 364 SRSSIKILEAQSNLYSAIIGDKVCMKIGDGSWCPAGKEWTLATSGHKYAVWHK 416 (416)
Q Consensus 364 ~~G~~~~~~~~~~~~~~~R~~~~lvvinn~~~~~~~~~~~~~ls~~~~~~~~~ 416 (416)
.+...+++.++.++|+...+++++|=|++.+..|++..|+++.+|.+|+||++
T Consensus 7 ~~S~v~I~~Ae~d~YaA~Id~kv~~KiGp~~~~P~~~~w~~a~~G~dyaVWek 59 (59)
T PF07821_consen 7 CRSKVKILAAEADLYAAIIDDKVIMKIGPRDWSPSGSGWKLAASGDDYAVWEK 59 (59)
T ss_dssp TT--EEEEEEETTEEEEEETTTEEEEESS-GGS---TTEEEEEEETTEEEEEE
T ss_pred CCCceEEEEecCCcEEEEECCeEEEEECCCccccCCCCcEEEeECCcEEEEeC
Confidence 45678889999999999999999999999999997789999999999999985
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Alpha-amylase is classified as family 13 of the glycosyl hydrolases and is present in archaea, bacteria, plants and animals. Alpha-amylase is an essential enzyme in alpha-glucan metabolism, acting to catalyse the hydrolysis of alpha-1,4-glucosidic bonds of glycogen, starch and related polysaccharides. Although all alpha-amylases possess the same catalytic function, they can vary with respect to sequence. In general, they are composed of three domains: a TIM barrel containing the active site residues and chloride ion-binding site (domain A), a long loop region inserted between the third beta strand and the alpha-helix of domain A that contains calcium-binding site(s) (domain B), and a C-terminal beta-sheet domain that appears to show some variability in sequence and length between amylases (domain C) []. Amylases have at least one conserved calcium-binding site, as calcium is essential for the stability of the enzyme. The chloride-binding functions to activate the enzyme, which acts by a two-step mechanism involving a catalytic nucleophile base (usually an Asp) and a catalytic proton donor (usually a Glu) that are responsible for the formation of the beta-linked glycosyl-enzyme intermediate. This entry represents the beta-sheet domain that is found in several alpha-amylases, usually at the C terminus. This domain is organised as a five-stranded anti-parallel beta-sheet [, ]. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0004556 alpha-amylase activity, 0005509 calcium ion binding, 0005975 carbohydrate metabolic process; PDB: 1AVA_B 1BG9_A 1AMY_A 1RP8_A 2QPU_A 3BSG_A 2QPS_A 3BSH_A 1RP9_A 1HT6_A .... |
| >PF11941 DUF3459: Domain of unknown function (DUF3459); InterPro: IPR022567 This functionally uncharacterised domain is found in bacteria | Back alignment and domain information |
|---|
Probab=98.07 E-value=1.3e-05 Score=62.33 Aligned_cols=47 Identities=17% Similarity=0.240 Sum_probs=37.3
Q ss_pred HHHHHHHHHHhCcccCCCCeEEEEe----cCCEEEEEE---CCEEEEEEcCCCC
Q 014892 349 QIVKLMDVRRQQDIHSRSSIKILEA----QSNLYSAII---GDKVCMKIGDGSW 395 (416)
Q Consensus 349 ~~~~Li~lR~~~~~l~~G~~~~~~~----~~~~~~~~R---~~~~lvvinn~~~ 395 (416)
+||+||+|||++|+|+.|+...+.. ++.+++++| +++++|++|.+..
T Consensus 1 ~yr~Li~LRr~~PaL~~~~~~~~~~~~~~~~~l~~~~r~~~~~~l~v~~Nls~~ 54 (89)
T PF11941_consen 1 FYRRLIALRRQHPALRDGDFRFLEVERDAPDALLAFRRTGGGERLLVAFNLSDE 54 (89)
T ss_dssp HHHHHHHHHHHHTHHCCSEEEEEEEEEEEETTEEEEEEEETTEEEEEEEE-SSS
T ss_pred CHHHHHHHHhhCccccCCCcccEEEEecCCCEEEEEEEEcCCceEEEEEecCCC
Confidence 6999999999999999998887763 345777777 4578888888764
|
It is about 110 amino acids in length and is found C-terminal to PF00128 from PFAM, PF02922 from PFAM. ; GO: 0033942 4-alpha-D-{(1->4)-alpha-D-glucano}trehalose trehalohydrolase activity; PDB: 2WC7_A 2WCS_A 2WKG_A 3M07_A 2PWD_A 1ZJB_A 2PWF_C 2PWE_A 2PWG_A 2PWH_A .... |
| >KOG3625 consensus Alpha amylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.89 E-value=1.1e-05 Score=84.16 Aligned_cols=82 Identities=20% Similarity=0.288 Sum_probs=73.0
Q ss_pred CcHHHHHhhhhhHHHcCCCEEEeCCCCCCC-CCCCcccccCCCCCCCCC------CHHHHHHHHHHHHHC-CCEEEEEEc
Q 014892 43 DWWRNLERKVPDISKSGFTSVWLPPATHSF-APEGYLPQNLYSLNSSYG------SEHLLKALLHKMKQH-KVRAMADIV 114 (416)
Q Consensus 43 G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~-~~~GY~~~d~~~id~~~G------t~~d~~~Lv~~aH~~-Gi~VilD~V 114 (416)
|-|+.=..+|.-+|+-|.|.|+++|+.+-. +..-|...|-..+++.+- +.||.++||+.+|+- +|--|-|+|
T Consensus 139 Gpl~eWeprL~va~e~gYNmIHfTPlqelG~S~S~YSl~dql~~~~~~~~~~~k~s~eDV~~lV~~l~rewnvlsi~DvV 218 (1521)
T KOG3625|consen 139 GPLDEWEPRLRVAKESGYNMIHFTPLQELGLSRSCYSLADQLELNPDFSRPNRKYSFEDVGQLVEKLKREWNVLSITDVV 218 (1521)
T ss_pred CChhhhhHHHHHHHHcCCceEeeeeHHHhccCCCccchHhhhhcChhhhccCCCCCHHHHHHHHHHHHhhcCeeeeehhh
Confidence 556667788999999999999999999876 467899999999998886 789999999999975 999999999
Q ss_pred cccCcCCCCC
Q 014892 115 INHRVGTTQG 124 (416)
Q Consensus 115 ~NH~~~~~~~ 124 (416)
+||++.+++|
T Consensus 219 ~NHtAnns~W 228 (1521)
T KOG3625|consen 219 YNHTANNSKW 228 (1521)
T ss_pred hhccccCCch
Confidence 9999999875
|
|
| >COG1649 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00011 Score=72.38 Aligned_cols=134 Identities=13% Similarity=0.078 Sum_probs=78.9
Q ss_pred cHHHHHhhhhhHHHcCCCEEEeCCCCCCCCC----CCccccc-----CCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEc
Q 014892 44 WWRNLERKVPDISKSGFTSVWLPPATHSFAP----EGYLPQN-----LYSLNSSYGSEHLLKALLHKMKQHKVRAMADIV 114 (416)
Q Consensus 44 ~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~----~GY~~~d-----~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V 114 (416)
+=+.+++.|+.|+.||||+|+.. ....++ .-..|.. ...+++ +-+=|+.+|++||++||+|+-=+-
T Consensus 62 ~~~el~~~ld~l~~ln~NTv~~q--V~~~G~~lypS~~~p~s~~~~~~~~~~~---g~DpLa~~I~~AHkr~l~v~aWf~ 136 (418)
T COG1649 62 QRQELKDILDDLQKLNFNTVYPQ--VWNDGDALYPSAVLPWSDGLPGVLGVDP---GYDPLAFVIAEAHKRGLEVHAWFN 136 (418)
T ss_pred cHHHHHHHHHHHHHcCCceeEEE--EecCccccccccccccccCcCcccCCCC---CCChHHHHHHHHHhcCCeeeechh
Confidence 45678999999999999999953 222111 1111110 011222 345689999999999999986443
Q ss_pred cccCcCCCCCCCCcccccCCCCCCCCC----CceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCC
Q 014892 115 INHRVGTTQGHGGKYNRYDGIPLSWDE----HAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGF 190 (416)
Q Consensus 115 ~NH~~~~~~~~~~~~~~f~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gv 190 (416)
+--++.... .+.. ....|-. .......+++ . ...=||-.+|+||++|.+.+.-.++.|.|
T Consensus 137 ~~~~a~~~s----~~~~---~~p~~~~~~~~~~~~~~~~~~--------~-~~~~ldPg~Pevq~~i~~lv~evV~~Ydv 200 (418)
T COG1649 137 PYRMAPPTS----PLTK---RHPHWLTTKRPGWVYVRHQGW--------G-KRVWLDPGIPEVQDFITSLVVEVVRNYDV 200 (418)
T ss_pred hcccCCCCC----hhHh---hCCCCcccCCCCeEEEecCCc--------e-eeeEeCCCChHHHHHHHHHHHHHHhCCCC
Confidence 333333211 0000 0011110 0011111111 0 12337788999999999999999999999
Q ss_pred CeEEeccc
Q 014892 191 QDFRFDFA 198 (416)
Q Consensus 191 DGfRlD~a 198 (416)
||+.||--
T Consensus 201 DGIQfDd~ 208 (418)
T COG1649 201 DGIQFDDY 208 (418)
T ss_pred Cceeccee
Confidence 99999953
|
|
| >smart00810 Alpha-amyl_C2 Alpha-amylase C-terminal beta-sheet domain | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00026 Score=50.23 Aligned_cols=51 Identities=55% Similarity=0.890 Sum_probs=44.8
Q ss_pred CCCCeEEEEecCCEEEEEECCEEEEEEcCC----CCCCCCCCcEEeeeCCceEEeeC
Q 014892 364 SRSSIKILEAQSNLYSAIIGDKVCMKIGDG----SWCPAGKEWTLATSGHKYAVWHK 416 (416)
Q Consensus 364 ~~G~~~~~~~~~~~~~~~R~~~~lvvinn~----~~~~~~~~~~~~ls~~~~~~~~~ 416 (416)
.+.+.+++.++.++|+...++++++=|++. +..|+ +|+++.||.+|+||++
T Consensus 7 ~~S~v~I~~Ae~dlY~A~Id~kv~~KiGp~~~~~~~~P~--~w~~a~sG~~yaVWek 61 (61)
T smart00810 7 SRSSLKILAAEADLYVAMIDEKVIMKIGPRYDVGNLIPS--GFHLAASGNDYAVWEK 61 (61)
T ss_pred CCCceEEEEecCCcEEEEeCCeEEEEECCCCCcCccCCC--CCEEEEECCCEEEEeC
Confidence 466788889999999999999999999995 56665 5999999999999986
|
This entry represents the beta-sheet domain that is found in several alpha-amylases, usually at the C-terminus. This domain is organised as a five-stranded anti-parallel beta-sheet. |
| >PLN02635 disproportionating enzyme | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.0024 Score=65.69 Aligned_cols=61 Identities=15% Similarity=0.036 Sum_probs=44.5
Q ss_pred eeeeccCceeEEEeeecCCCC-CCcHHH-HHhhhhhHHHcCCCEEEeCCCCCCC-----CCCCccccc
Q 014892 21 RAVIRNGREILFQGFNWESCK-HDWWRN-LERKVPDISKSGFTSVWLPPATHSF-----APEGYLPQN 81 (416)
Q Consensus 21 ~~~~~~~~~~~~q~f~~~~~~-~G~~~g-i~~~LdyLk~LGv~~I~L~Pi~~~~-----~~~GY~~~d 81 (416)
+.+-..+.||++|+|-=-..- =|||.. ..+-+|.+++.|.+.++|+|+++.. ....|.+.+
T Consensus 23 ~~~~~R~~Gvll~l~SLps~~GIGDfg~~a~~fvd~la~~G~~~wQilPL~pt~~~~~~~~SPYs~~S 90 (538)
T PLN02635 23 RDAARRRAGILLHPTSLPGPYGIGDLGDEAFRFLDWLASTGCSVWQVLPLVPPGRKGGEDGSPYSGQD 90 (538)
T ss_pred ccCCCcceEEEEccccCCCCCCCcchHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCCCCCCccccc
Confidence 334445579999999744333 389976 5589999999999999999998763 244555544
|
|
| >PRK14508 4-alpha-glucanotransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.0068 Score=62.23 Aligned_cols=56 Identities=11% Similarity=-0.007 Sum_probs=41.9
Q ss_pred cCceeEEEeeec-CCCCCCcHH-HHHhhhhhHHHcCCCEEEeCCCCCCC-CCCCccccc
Q 014892 26 NGREILFQGFNW-ESCKHDWWR-NLERKVPDISKSGFTSVWLPPATHSF-APEGYLPQN 81 (416)
Q Consensus 26 ~~~~~~~q~f~~-~~~~~G~~~-gi~~~LdyLk~LGv~~I~L~Pi~~~~-~~~GY~~~d 81 (416)
..-|+++|+|-= ....=|||. .+.+-++.+++.|++.|+|+|+.+.. ....|.+.+
T Consensus 5 R~~Gv~~~l~SL~~~~GiGDfg~dl~~~id~~~~~G~~~~qilPl~~~~~~~SPY~~~S 63 (497)
T PRK14508 5 RKSGILLHITSLPGSYGIGDFGKGAYEFIDFLAEAGQSYWQILPLGPTGYGDSPYQSFS 63 (497)
T ss_pred CceEEEeccccCCCCCCCcchHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCCcCccc
Confidence 345899999854 223348995 99999999999999999999999754 123455433
|
|
| >cd06592 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharacterized Homo sapiens protein with a glycosyl hydrolase family 31 (GH31) domain that is homologous to the Escherichia coli YihQ glucosidase | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.0012 Score=63.72 Aligned_cols=136 Identities=11% Similarity=0.112 Sum_probs=84.8
Q ss_pred CcHHHHHhhhhhHHHcCC--CEEEeCCCCCCCCCCCcccccCCCCCC-CCCCHHHHHHHHHHHHHCCCEEEEEEccccCc
Q 014892 43 DWWRNLERKVPDISKSGF--TSVWLPPATHSFAPEGYLPQNLYSLNS-SYGSEHLLKALLHKMKQHKVRAMADIVINHRV 119 (416)
Q Consensus 43 G~~~gi~~~LdyLk~LGv--~~I~L~Pi~~~~~~~GY~~~d~~~id~-~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~ 119 (416)
-+-+.|.+.++.++++|| ++|+|=.-+... . .| +..|+ +|- +.++||+++|++|+|+++=+-+ +++
T Consensus 27 ~s~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~--~----g~-f~~d~~~FP---dp~~mi~~l~~~G~k~~l~i~P-~i~ 95 (303)
T cd06592 27 INQETVLNYAQEIIDNGFPNGQIEIDDNWETC--Y----GD-FDFDPTKFP---DPKGMIDQLHDLGFRVTLWVHP-FIN 95 (303)
T ss_pred cCHHHHHHHHHHHHHcCCCCCeEEeCCCcccc--C----Cc-cccChhhCC---CHHHHHHHHHHCCCeEEEEECC-eeC
Confidence 368889999999999994 677774322211 1 12 34443 665 4789999999999999997776 455
Q ss_pred CCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCC-CCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEeccc
Q 014892 120 GTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNF-HGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFA 198 (416)
Q Consensus 120 ~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a 198 (416)
.+++.+.. .. .........++. .+..+..+ ....-+|+.||++|+...+.++.++.+.|||||-+|..
T Consensus 96 ~~s~~~~e----~~------~~g~~vk~~~g~-~~~~~~~w~g~~~~~Dftnp~a~~w~~~~~~~~~~~~Gvdg~w~D~~ 164 (303)
T cd06592 96 TDSENFRE----AV------EKGYLVSEPSGD-IPALTRWWNGTAAVLDFTNPEAVDWFLSRLKSLQEKYGIDSFKFDAG 164 (303)
T ss_pred CCCHHHHh----hh------hCCeEEECCCCC-CCcccceecCCcceEeCCCHHHHHHHHHHHHHHHHHhCCcEEEeCCC
Confidence 44321110 00 000001111110 01111111 11334899999999999999999988999999999986
Q ss_pred CC
Q 014892 199 RG 200 (416)
Q Consensus 199 ~~ 200 (416)
..
T Consensus 165 E~ 166 (303)
T cd06592 165 EA 166 (303)
T ss_pred Cc
Confidence 53
|
Orthologs of KIA1161 are found in eukaryotes and prokaryotes. In bacteria, YihQ (along with YihO) is important for bacterial O-antigen capsule assembly and translocation. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. |
| >cd06593 GH31_xylosidase_YicI YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.001 Score=64.28 Aligned_cols=139 Identities=12% Similarity=0.055 Sum_probs=88.5
Q ss_pred CcHHHHHhhhhhHHHcC--CCEEEeCCCCCCCCCCCcccccCCCCC-CCCCCHHHHHHHHHHHHHCCCEEEEEEccccCc
Q 014892 43 DWWRNLERKVPDISKSG--FTSVWLPPATHSFAPEGYLPQNLYSLN-SSYGSEHLLKALLHKMKQHKVRAMADIVINHRV 119 (416)
Q Consensus 43 G~~~gi~~~LdyLk~LG--v~~I~L~Pi~~~~~~~GY~~~d~~~id-~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~ 119 (416)
.+-+.+.+.++.+++.| +++|||=.=+.. +|.-.| +..| .+|.. .++||+++|++|++|++-+.+ +++
T Consensus 21 ~~~~~v~~~~~~~~~~~iP~d~~~lD~~w~~----~~~~~~-f~~d~~~FPd---~~~~i~~l~~~G~~~~~~~~P-~i~ 91 (308)
T cd06593 21 YDEEEVNEFADGMRERNLPCDVIHLDCFWMK----EFQWCD-FEFDPDRFPD---PEGMLSRLKEKGFKVCLWINP-YIA 91 (308)
T ss_pred CCHHHHHHHHHHHHHcCCCeeEEEEeccccc----CCccee-eEECcccCCC---HHHHHHHHHHCCCeEEEEecC-CCC
Confidence 46778899999999999 777887654432 222223 4555 46654 689999999999999998876 566
Q ss_pred CCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCC-CCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEeccc
Q 014892 120 GTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNF-HGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFA 198 (416)
Q Consensus 120 ~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a 198 (416)
.+++.+.. ... ..+ +....++.. .....+ ....-+|+.||++++...+.++.++ +.|||||-+|..
T Consensus 92 ~~~~~~~e----~~~--~g~----~v~~~~g~~--~~~~~w~g~~~~~Dftnp~a~~w~~~~~~~~~-~~Gid~~~~D~~ 158 (308)
T cd06593 92 QKSPLFKE----AAE--KGY----LVKKPDGSV--WQWDLWQPGMGIIDFTNPDACKWYKDKLKPLL-DMGVDCFKTDFG 158 (308)
T ss_pred CCchhHHH----HHH--CCe----EEECCCCCe--eeecccCCCcccccCCCHHHHHHHHHHHHHHH-HhCCcEEecCCC
Confidence 55432110 000 000 000011110 000111 1223479999999999999999887 799999999988
Q ss_pred CCCcH
Q 014892 199 RGYSA 203 (416)
Q Consensus 199 ~~~~~ 203 (416)
..+|.
T Consensus 159 e~~p~ 163 (308)
T cd06593 159 ERIPT 163 (308)
T ss_pred CCCCc
Confidence 76553
|
YicI forms a homohexamer (a trimer of dimers). All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. The YicI family corresponds to subgroup 4 in the Ernst et al classification of GH31 enzymes. |
| >cd06597 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide-synthesizing enzyme Y) is a bacterial 3-alpha-isomaltosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsZ | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.00087 Score=65.66 Aligned_cols=149 Identities=15% Similarity=0.132 Sum_probs=82.1
Q ss_pred cHHHHHhhhhhHHHcCC--CEEEeCCCCCCCC-----CCCcc------cccC--CCCC--CCCCCHHHHHHHHHHHHHCC
Q 014892 44 WWRNLERKVPDISKSGF--TSVWLPPATHSFA-----PEGYL------PQNL--YSLN--SSYGSEHLLKALLHKMKQHK 106 (416)
Q Consensus 44 ~~~gi~~~LdyLk~LGv--~~I~L~Pi~~~~~-----~~GY~------~~d~--~~id--~~~Gt~~d~~~Lv~~aH~~G 106 (416)
+-+.+.+-++.+++.|| ++|+|=+...... +..|. +..+ +..+ .+|- +.++||+++|++|
T Consensus 22 ~~~ev~~v~~~~~~~~iP~d~i~lD~W~~~~~~~~w~d~~y~~~~~~~~~~~~~~~f~~~~~FP---dp~~mi~~Lh~~G 98 (340)
T cd06597 22 TQAEVMRQMDAHEEHGIPVTVVVIEQWSDEATFYVFNDAQYTPKDGGAPLSYDDFSFPVEGRWP---NPKGMIDELHEQG 98 (340)
T ss_pred CHHHHHHHHHHHHHcCCCeeEEEEecccCcceeeeeccchhcccccCCcceecccccCccccCC---CHHHHHHHHHHCC
Confidence 67888999999999886 7888864221100 11121 1111 1111 2333 6899999999999
Q ss_pred CEEEEEEccccCcCC-CCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHH
Q 014892 107 VRAMADIVINHRVGT-TQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLR 185 (416)
Q Consensus 107 i~VilD~V~NH~~~~-~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~ 185 (416)
+||++=+.+ ++..+ ++. ...+..+.. ...........++........+.....-+|+.||++++...+.++.++
T Consensus 99 ~kv~l~v~P-~i~~~~~~~-~~~~~~~~~---~~~~g~~vk~~~G~~~~~~~~W~g~~~~~Dftnp~a~~Ww~~~~~~~~ 173 (340)
T cd06597 99 VKVLLWQIP-IIKLRPHPH-GQADNDEDY---AVAQNYLVQRGVGKPYRIPGQWFPDSLMLDFTNPEAAQWWMEKRRYLV 173 (340)
T ss_pred CEEEEEecC-ccccccccc-cccchhHHH---HHHCCEEEEcCCCCccccccccCCCceeecCCCHHHHHHHHHHHHHHH
Confidence 999985444 33221 110 000000100 000000111111111000011112234589999999999999999998
Q ss_pred HhcCCCeEEecccCC
Q 014892 186 NTVGFQDFRFDFARG 200 (416)
Q Consensus 186 ~~~gvDGfRlD~a~~ 200 (416)
++.|||||-+|+...
T Consensus 174 ~~~Gidg~w~D~~E~ 188 (340)
T cd06597 174 DELGIDGFKTDGGEH 188 (340)
T ss_pred HhcCCcEEEecCCCc
Confidence 789999999998754
|
CtsY and CtsZ both have a glycosyl hydrolase family 31 (GH31) catalytic domain. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. |
| >PF02065 Melibiase: Melibiase; InterPro: IPR000111 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.007 Score=60.23 Aligned_cols=135 Identities=11% Similarity=0.003 Sum_probs=82.0
Q ss_pred cHHHHHhhhhhHHHcCCCEEEeC-CCCCCCC----CCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccccC
Q 014892 44 WWRNLERKVPDISKSGFTSVWLP-PATHSFA----PEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHR 118 (416)
Q Consensus 44 ~~~gi~~~LdyLk~LGv~~I~L~-Pi~~~~~----~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~ 118 (416)
+-+.|.+.++.++++|++.+.|= -.+.... ..|.+..| ..+|- ..++.|++.+|++||+.=|=+-+--+
T Consensus 56 ~e~~i~~~a~~~~~~G~e~fviDDGW~~~r~~d~~~~GdW~~~----~~kFP--~Gl~~l~~~i~~~Gmk~GlW~ePe~v 129 (394)
T PF02065_consen 56 TEEKILELADAAAELGYEYFVIDDGWFGGRDDDNAGLGDWEPD----PKKFP--NGLKPLADYIHSLGMKFGLWFEPEMV 129 (394)
T ss_dssp -HHHHHHHHHHHHHHT-SEEEE-SSSBCTESTTTSTTSBECBB----TTTST--THHHHHHHHHHHTT-EEEEEEETTEE
T ss_pred CHHHHHHHHHHHHHhCCEEEEEcCccccccCCCcccCCceeEC----hhhhC--CcHHHHHHHHHHCCCeEEEEeccccc
Confidence 56778888889999999988872 2222111 12333322 23553 35999999999999999987777666
Q ss_pred cCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEeccc
Q 014892 119 VGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFA 198 (416)
Q Consensus 119 ~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a 198 (416)
+.++...+....|.-. . .+... .. .....-||+.+|+|++++.+.+...+++.|||.+.+|..
T Consensus 130 ~~~S~l~~~hPdw~l~-----~-------~~~~~--~~---~r~~~vLD~~~pev~~~l~~~i~~ll~~~gidYiK~D~n 192 (394)
T PF02065_consen 130 SPDSDLYREHPDWVLR-----D-------PGRPP--TL---GRNQYVLDLSNPEVRDYLFEVIDRLLREWGIDYIKWDFN 192 (394)
T ss_dssp ESSSCHCCSSBGGBTC-----C-------TTSE---EC---BTTBEEB-TTSHHHHHHHHHHHHHHHHHTT-SEEEEE-T
T ss_pred cchhHHHHhCccceee-----c-------CCCCC--cC---cccceEEcCCCHHHHHHHHHHHHHHHHhcCCCEEEeccc
Confidence 6665543322222110 0 00000 00 011234899999999999999999888999999999986
Q ss_pred CCC
Q 014892 199 RGY 201 (416)
Q Consensus 199 ~~~ 201 (416)
..+
T Consensus 193 ~~~ 195 (394)
T PF02065_consen 193 RDI 195 (394)
T ss_dssp S-T
T ss_pred cCC
Confidence 544
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycosyl hydrolase family 27, family 31 and family 36 alpha-galactosidases form the glycosyl hydrolase clan GH-D (acc_GH from CAZY), a superfamily of alpha-galactosidases, alpha-N-acetylgalactosaminidases, and isomaltodextranases which are likely to share a common catalytic mechanism and structural topology. Alpha-galactosidase (3.2.1.22 from EC) (melibiase) [] catalyzes the hydrolysis of melibiose into galactose and glucose. In man, the deficiency of this enzyme is the cause of Fabry's disease (X-linked sphingolipidosis). Alpha-galactosidase is present in a variety of organisms. There is a considerable degree of similarity in the sequence of alpha-galactosidase from various eukaryotic species. Escherichia coli alpha-galactosidase (gene melA), which requires NAD and magnesium as cofactors, is not structurally related to the eukaryotic enzymes; by contrast, an Escherichia coli plasmid encoded alpha-galactosidase (gene rafA P16551 from SWISSPROT) [] contains a region of about 50 amino acids which is similar to a domain of the eukaryotic alpha-galactosidases. Alpha-N-acetylgalactosaminidase (3.2.1.49 from EC) [] catalyzes the hydrolysis of terminal non-reducing N-acetyl-D-galactosamine residues in N-acetyl-alpha-D- galactosaminides. In man, the deficiency of this enzyme is the cause of Schindler and Kanzaki diseases. The sequence of this enzyme is highly related to that of the eukaryotic alpha-galactosidases.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1KTC_A 1KTB_A 1UAS_A 3H55_A 3H53_A 3IGU_B 3H54_A 3LRM_A 3LRL_A 3LRK_A .... |
| >cd06599 GH31_glycosidase_Aec37 Glycosyl hydrolase family 31 (GH31) domain of a bacterial protein family represented by Escherichia coli protein Aec37 | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0048 Score=59.90 Aligned_cols=137 Identities=14% Similarity=0.067 Sum_probs=78.7
Q ss_pred HHHHHhhhhhHHHcCC--CEEEeCCCCCCCCCCCcccccCCCCC-CCCCCHHHHHHHHHHHHHCCCEEEEEEccccCcCC
Q 014892 45 WRNLERKVPDISKSGF--TSVWLPPATHSFAPEGYLPQNLYSLN-SSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGT 121 (416)
Q Consensus 45 ~~gi~~~LdyLk~LGv--~~I~L~Pi~~~~~~~GY~~~d~~~id-~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~ 121 (416)
=+.|.+-++.+++.|| ++|||-+=+.......+ .+ +..| .+|- +.++||+++|++|+||++-+.+ +++.+
T Consensus 28 q~~v~~~~~~~r~~~iP~d~i~ld~~~~~~~~~~~--~~-f~~d~~~FP---dp~~mi~~L~~~g~k~~~~i~P-~i~~~ 100 (317)
T cd06599 28 QEALLEFIDKCREHDIPCDSFHLSSGYTSIEGGKR--YV-FNWNKDRFP---DPAAFVAKFHERGIRLAPNIKP-GLLQD 100 (317)
T ss_pred HHHHHHHHHHHHHcCCCeeEEEEeccccccCCCce--ee-eecCcccCC---CHHHHHHHHHHCCCEEEEEeCC-cccCC
Confidence 4578888888998886 78887542221100001 11 3444 3554 5779999999999999995544 44443
Q ss_pred CCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCC-CCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccC
Q 014892 122 TQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHG-VPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFAR 199 (416)
Q Consensus 122 ~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~ 199 (416)
++. |.-... ..+ .....++.. +..+..+.+ ..-+|+.||++++...+.++..+.+.|||||=+|...
T Consensus 101 ~~~----y~e~~~--~g~----~v~~~~g~~-~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~~~~~Gvdg~w~D~~E 168 (317)
T cd06599 101 HPR----YKELKE--AGA----FIKPPDGRE-PSIGQFWGGVGSFVDFTNPEGREWWKEGVKEALLDLGIDSTWNDNNE 168 (317)
T ss_pred CHH----HHHHHH--CCc----EEEcCCCCC-cceecccCCCeEeecCCChHHHHHHHHHHHHHHhcCCCcEEEecCCC
Confidence 331 100000 000 000011110 011111221 2248899999999999988655558999999999765
|
The gene encoding Aec37 (aec-37) is located within a genomic island (AGI-3) isolated from the extraintestinal avian pathogenic Escherichia coli strain BEN2908. The function of Aec37 and its orthologs is unknown; however, deletion of a region of the genome that includes aec-37 affects the assimilation of seven carbohydrates, decreases growth rate of the strain in minimal medium containing galacturonate or trehalose, and attenuates the virulence of E. coli BEN2908 in chickens. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. |
| >PF13199 Glyco_hydro_66: Glycosyl hydrolase family 66; PDB: 3VMO_A 3VMN_A 3VMP_A | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0097 Score=61.55 Aligned_cols=146 Identities=13% Similarity=0.095 Sum_probs=74.6
Q ss_pred cHHHHHhhhhhHHHcCCCEEEeCCCCCC-CCCCCccc----ccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccccC
Q 014892 44 WWRNLERKVPDISKSGFTSVWLPPATHS-FAPEGYLP----QNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHR 118 (416)
Q Consensus 44 ~~~gi~~~LdyLk~LGv~~I~L~Pi~~~-~~~~GY~~----~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~ 118 (416)
+.....+.|+.|+.+-||+|++==.+-. ..+.+-.. ..|..+.-+-=..+-+|.+|++||+.||++|.=.-+.-.
T Consensus 116 ~~~~~~~~i~~L~~yHIN~~QFYDW~~rH~~Pl~~~~~~~~~~w~D~~~r~i~~~~Vk~yI~~ah~~Gmkam~Ynmiyaa 195 (559)
T PF13199_consen 116 SAEDIEAEIDQLNRYHINGLQFYDWMYRHHKPLPGTNGQPDQTWTDWANRQISTSTVKDYINAAHKYGMKAMAYNMIYAA 195 (559)
T ss_dssp GHHHHHHHHHHHHHTT--EEEETS--SBTTB-S-SSS-EEE-TT-TTT--EEEHHHHHHHHHHHHHTT-EEEEEEESSEE
T ss_pred CchhHHHHHHHHHhhCcCeEEEEeeccccCCcCCCCCCchhhhhhhhcCCEehHHHHHHHHHHHHHcCcceehhHhhhcc
Confidence 6788899999999999999997322211 00000000 112223223334688999999999999999974333322
Q ss_pred cCCCC--CCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEec
Q 014892 119 VGTTQ--GHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFD 196 (416)
Q Consensus 119 ~~~~~--~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD 196 (416)
..+.. +..+.|..|...... .......+++|. ..+-=+|-.||+=|++|++-++..++.+|+|||.+|
T Consensus 196 ~~~~~~~gv~~eW~ly~d~~~~--~~~~~~l~~~w~--------s~lyl~dP~N~~WQ~yI~~q~~~~~~~~gFDG~hlD 265 (559)
T PF13199_consen 196 NNNYEEDGVSPEWGLYKDDSHS--NQDTYDLPDGWP--------SDLYLMDPGNPEWQNYIINQMNKAIQNFGFDGWHLD 265 (559)
T ss_dssp ETT--S--SS-GGBEEESSSBT--SB-EEEETT-E----------EEEEB-TT-HHHHHHHHHHHHHHHHHHT--EEEEE
T ss_pred ccCcccccCCchhhhhhccCCC--ccceeecCcccc--------cceEEecCCCHHHHHHHHHHHHHHHHccCCceEeee
Confidence 22211 122233333221000 000111111111 113347889999999999999999999999999999
Q ss_pred ccC
Q 014892 197 FAR 199 (416)
Q Consensus 197 ~a~ 199 (416)
...
T Consensus 266 q~G 268 (559)
T PF13199_consen 266 QLG 268 (559)
T ss_dssp -S-
T ss_pred ccC
Confidence 864
|
|
| >PF13200 DUF4015: Putative glycosyl hydrolase domain | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.069 Score=51.41 Aligned_cols=133 Identities=20% Similarity=0.233 Sum_probs=81.1
Q ss_pred cHHHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCC-CCCCCCC----CHHHHHHHHHHHHHCCCEEEEEEccccC
Q 014892 44 WWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLY-SLNSSYG----SEHLLKALLHKMKQHKVRAMADIVINHR 118 (416)
Q Consensus 44 ~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~-~id~~~G----t~~d~~~Lv~~aH~~Gi~VilD~V~NH~ 118 (416)
+=+.+.+.|+.|++-|+|+|-+- -...+|.-..+.- ......| ...|+++|++.||++||.+|.=+|.=-
T Consensus 11 ~~~~~~~~~~~i~~t~lNavVID----vKdd~G~i~y~s~~~~~~~~ga~~~~i~D~~~l~~~l~e~gIY~IARIv~Fk- 85 (316)
T PF13200_consen 11 SPERLDKLLDLIKRTELNAVVID----VKDDDGNITYDSQVPLAREIGAVKPYIKDLKALVKKLKEHGIYPIARIVVFK- 85 (316)
T ss_pred CHHHHHHHHHHHHhcCCceEEEE----EecCCceEEecCCCchhhhcccccccccCHHHHHHHHHHCCCEEEEEEEEec-
Confidence 44568888999999999999863 2233442222110 0111122 246899999999999999999887631
Q ss_pred cCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEeccc
Q 014892 119 VGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFA 198 (416)
Q Consensus 119 ~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a 198 (416)
+..... ..++|. ....+|.. +. +..+..=+|--+++|++|++++++... ..|+|.+.||-+
T Consensus 86 --D~~la~--------~~pe~a----v~~~~G~~--w~--d~~~~~WvnP~~~evw~Y~i~IA~Eaa-~~GFdEIqfDYI 146 (316)
T PF13200_consen 86 --DPVLAE--------AHPEWA----VKTKDGSV--WR--DNEGEAWVNPYSKEVWDYNIDIAKEAA-KLGFDEIQFDYI 146 (316)
T ss_pred --ChHHhh--------hChhhE----EECCCCCc--cc--CCCCCccCCCCCHHHHHHHHHHHHHHH-HcCCCEEEeeee
Confidence 110000 001111 11111111 11 112234477789999999999999987 899999999987
Q ss_pred CC
Q 014892 199 RG 200 (416)
Q Consensus 199 ~~ 200 (416)
..
T Consensus 147 RF 148 (316)
T PF13200_consen 147 RF 148 (316)
T ss_pred ec
Confidence 43
|
|
| >PRK14507 putative bifunctional 4-alpha-glucanotransferase/malto-oligosyltrehalose synthase; Provisional | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.013 Score=67.38 Aligned_cols=54 Identities=17% Similarity=0.168 Sum_probs=46.3
Q ss_pred CCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCC--cHHHHHHHHH
Q 014892 158 DNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGY--SAKYVKEYIE 211 (416)
Q Consensus 158 ~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~--~~~~~~~~~~ 211 (416)
.+..++.-+..++|+|-+..-..+..|+++=-|||+|+|.+.++ |..+++.+.+
T Consensus 1036 FdIn~L~~lRvE~~~VF~~tH~li~~L~~~G~vdGlRIDHiDGL~dP~~Yl~rLr~ 1091 (1693)
T PRK14507 1036 FDINSLAALRMERPDVFEATHALLFRLIAEGRIDGLRIDHPDGLADPAGYFRRLQA 1091 (1693)
T ss_pred ecchhheeeeccCHHHHHHHHHHHHHHHHCCCCCeEEeCCCccccCHHHHHHHHHH
Confidence 34578888999999999999999999998999999999999887 4667777754
|
|
| >cd06594 GH31_glucosidase_YihQ YihQ is a bacterial alpha-glucosidase with a conserved glycosyl hydrolase family 31 (GH31) domain that catalyzes the release of an alpha-glucosyl residue from the non-reducing end of alpha-glucoside substrates such as alpha-glucosyl fluoride | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.0087 Score=58.05 Aligned_cols=142 Identities=14% Similarity=0.100 Sum_probs=84.0
Q ss_pred cHHHHHhhhhhHHHcCC--CEEEeCCCCCC--CCCCCcc-cccCCCCCC-CCCCHHHHHHHHHHHHHCCCEEEEEEcccc
Q 014892 44 WWRNLERKVPDISKSGF--TSVWLPPATHS--FAPEGYL-PQNLYSLNS-SYGSEHLLKALLHKMKQHKVRAMADIVINH 117 (416)
Q Consensus 44 ~~~gi~~~LdyLk~LGv--~~I~L~Pi~~~--~~~~GY~-~~d~~~id~-~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH 117 (416)
+-+.+.+.++.+++.|| ++|||- .+.. ....|+. ..+ +..|+ +|- +.++||+++|++|++||+-+ -.+
T Consensus 21 s~~~v~~~~~~~~~~~iP~d~i~ld-dw~~~~~~~~g~~~~~~-f~~d~~~FP---dp~~mi~~Lh~~G~~~~~~i-~P~ 94 (317)
T cd06594 21 GTDKVLEALEKARAAGVKVAGLWLQ-DWTGRRETSFGDRLWWN-WEWDPERYP---GLDELIEELKARGIRVLTYI-NPY 94 (317)
T ss_pred CHHHHHHHHHHHHHcCCCeeEEEEc-cccCcccccccceeeee-eEEChhhCC---CHHHHHHHHHHCCCEEEEEe-cCc
Confidence 68889999999999765 678885 3311 0122332 112 34454 454 47899999999999999944 445
Q ss_pred CcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCC-CCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEec
Q 014892 118 RVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNF-HGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFD 196 (416)
Q Consensus 118 ~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD 196 (416)
+..+.+.. |..-.. . .......++. +.....+ ....-+|+.||++++...+-++..+.+.|||||=+|
T Consensus 95 v~~~~~~~---y~~~~~--~----g~~vk~~~g~--~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~~~~~Gvdg~w~D 163 (317)
T cd06594 95 LADDGPLY---YEEAKD--A----GYLVKDADGS--PYLVDFGEFDCGVLDLTNPAARDWFKQVIKEMLLDLGLSGWMAD 163 (317)
T ss_pred eecCCchh---HHHHHH--C----CeEEECCCCC--eeeeccCCCCceeeecCCHHHHHHHHHHHHHHhhhcCCcEEEec
Confidence 55433210 110000 0 0011111111 0111111 122458999999999999999887568999999999
Q ss_pred ccCCCc
Q 014892 197 FARGYS 202 (416)
Q Consensus 197 ~a~~~~ 202 (416)
+-..++
T Consensus 164 ~~E~~p 169 (317)
T cd06594 164 FGEYLP 169 (317)
T ss_pred CCCCCC
Confidence 766443
|
Orthologs of YihQ that have not yet been functionally characterized are present in plants and fungi. YihQ has sequence similarity to other GH31 enzymes such as CtsZ, a 6-alpha-glucosyltransferase from Bacillus globisporus, and YicI, an alpha-xylosidase from Echerichia coli. In bacteria, YihQ (along with YihO) is important for bacterial O-antigen capsule assembly and translocation. |
| >PF14488 DUF4434: Domain of unknown function (DUF4434) | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.019 Score=50.16 Aligned_cols=85 Identities=12% Similarity=0.202 Sum_probs=58.3
Q ss_pred ceeEEEeeecCCCCCCcHHHHHhhhhhHHHcCCCEEEeCCCCCCCCCCC--cccccCCCCCCCCCCHHHHHHHHHHHHHC
Q 014892 28 REILFQGFNWESCKHDWWRNLERKVPDISKSGFTSVWLPPATHSFAPEG--YLPQNLYSLNSSYGSEHLLKALLHKMKQH 105 (416)
Q Consensus 28 ~~~~~q~f~~~~~~~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~G--Y~~~d~~~id~~~Gt~~d~~~Lv~~aH~~ 105 (416)
+|+++|.+.|+...+=+-+.=.+.+.++|++||++|-|. ..++.+ +-|..++.-.-..+..+-+..+.++|.+.
T Consensus 2 tGtF~q~~~~d~~~~~~~~~W~~~~~~m~~~GidtlIlq----~~~~~~~~~yps~~~~~~~~~~~~d~l~~~L~~A~~~ 77 (166)
T PF14488_consen 2 TGTFLQPWSWDIHQNWTPAQWREEFRAMKAIGIDTLILQ----WTGYGGFAFYPSKLSPGGFYMPPVDLLEMILDAADKY 77 (166)
T ss_pred ceEEEccccchhhcCCCHHHHHHHHHHHHHcCCcEEEEE----EeecCCcccCCccccCccccCCcccHHHHHHHHHHHc
Confidence 378899999875222234455678999999999999876 222333 22443321122235677899999999999
Q ss_pred CCEEEEEEccc
Q 014892 106 KVRAMADIVIN 116 (416)
Q Consensus 106 Gi~VilD~V~N 116 (416)
||+|++-+-++
T Consensus 78 Gmkv~~Gl~~~ 88 (166)
T PF14488_consen 78 GMKVFVGLYFD 88 (166)
T ss_pred CCEEEEeCCCC
Confidence 99999977655
|
|
| >PRK14582 pgaB outer membrane N-deacetylase; Provisional | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.069 Score=56.57 Aligned_cols=151 Identities=12% Similarity=0.089 Sum_probs=86.0
Q ss_pred eeccCceeEEEe---eecCCCCCCcHHHHHhhhhhHHHcCCCEEEeCCCCCCCCC----CCcccccCCCC-CCCCCCHHH
Q 014892 23 VIRNGREILFQG---FNWESCKHDWWRNLERKVPDISKSGFTSVWLPPATHSFAP----EGYLPQNLYSL-NSSYGSEHL 94 (416)
Q Consensus 23 ~~~~~~~~~~q~---f~~~~~~~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~----~GY~~~d~~~i-d~~~Gt~~d 94 (416)
...++..+++|+ +.-+-.....-+.+...|+.||++|+|+|+|--+....++ .-|-|.++.-+ ++-|.. -.
T Consensus 308 ~~~~~~~r~~h~dld~vyd~dp~qq~~~L~~lLdrlk~~G~ntV~lqafadp~gd~~~~s~yfP~~~lp~r~d~f~~-~a 386 (671)
T PRK14582 308 VQEKSPQRVMHIDLDYVYDENPQQQDRNIDVLIQRVKDMQISTVYLQAFADPDGDGLVKELYFPNRLLPMRADLFNR-VA 386 (671)
T ss_pred ccCCCCEEEEEeccccccCCCHHHHHHHHHHHHHHHHHcCCCEEEEEeccCCCCCccccccccCccccccccCCcCH-HH
Confidence 344677788888 2222223346789999999999999999999776544321 12444433332 222222 12
Q ss_pred HHHHHHHHHHCCCEEEEEEccccCcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHH
Q 014892 95 LKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVR 174 (416)
Q Consensus 95 ~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~ 174 (416)
++ -+|++|++|..=+-+=-.+-...-... ..+.. +... ......+ ...|+-.+|+||
T Consensus 387 w~----l~~r~~v~v~AWmp~~~~~~~~~~~~~---------~~~~~-------~~~~-~~~~~~~--~~rl~P~~pe~r 443 (671)
T PRK14582 387 WQ----LRTRAGVNVYAWMPVLSFDLDPTLPRV---------KRLDT-------GEGK-AQIHPEQ--YRRLSPFDDRVR 443 (671)
T ss_pred HH----HHHhhCCEEEEeccceeeccCCCcchh---------hhccc-------cCCc-cccCCCC--CcCCCCCCHHHH
Confidence 22 299999999863322111110000000 00000 0000 0000001 223888899999
Q ss_pred HHHHHHHHHHHHhcCCCeEEecc
Q 014892 175 KDIIAWLRWLRNTVGFQDFRFDF 197 (416)
Q Consensus 175 ~~l~~~~~~w~~~~gvDGfRlD~ 197 (416)
+.|.++..-.++.+.|||+-||-
T Consensus 444 ~~i~~i~~dla~~~~~dGilf~D 466 (671)
T PRK14582 444 AQVGMLYEDLAGHAAFDGILFHD 466 (671)
T ss_pred HHHHHHHHHHHHhCCCceEEecc
Confidence 99999999999888999999873
|
|
| >COG3280 TreY Maltooligosyl trehalose synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.0041 Score=64.69 Aligned_cols=62 Identities=15% Similarity=0.144 Sum_probs=49.8
Q ss_pred CCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCC--cHHHHHHHHHhcCC-ceEEEc
Q 014892 160 FHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGY--SAKYVKEYIEGARP-IFSVGE 221 (416)
Q Consensus 160 ~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~--~~~~~~~~~~~~~~-~~~vgE 221 (416)
..++.-+..+.++|-+.--.-+..|+++==|||.|+|.+.++ |..+++.+++.+-| .+++-|
T Consensus 267 Vn~L~glRvEd~~VF~~tH~li~~L~~eglidGlRIDHiDGLaDP~gYl~rLR~~~G~~~~I~VE 331 (889)
T COG3280 267 VNSLAGLRVEDPAVFEATHRLIFELLREGLIDGLRIDHIDGLADPKGYLRRLRQLVGPDRYIVVE 331 (889)
T ss_pred ccchheeeeccHHHHHHHHHHHHHHHHhccccceeecccccccCHHHHHHHHHHhcCCCcEEEEe
Confidence 467888999999999999999999998888999999999887 46677777776653 344333
|
|
| >cd06591 GH31_xylosidase_XylS XylS is a glycosyl hydrolase family 31 (GH31) alpha-xylosidase found in prokaryotes, eukaryotes, and archaea, that catalyzes the release of alpha-xylose from the non-reducing terminal side of the alpha-xyloside substrate | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.013 Score=56.92 Aligned_cols=136 Identities=15% Similarity=0.119 Sum_probs=77.8
Q ss_pred CcHHHHHhhhhhHHHc--CCCEEEeCCCCCCCCCCCcccccCCCCCC-CCCCHHHHHHHHHHHHHCCCEEEEEEccccCc
Q 014892 43 DWWRNLERKVPDISKS--GFTSVWLPPATHSFAPEGYLPQNLYSLNS-SYGSEHLLKALLHKMKQHKVRAMADIVINHRV 119 (416)
Q Consensus 43 G~~~gi~~~LdyLk~L--Gv~~I~L~Pi~~~~~~~GY~~~d~~~id~-~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~ 119 (416)
.+-+.+.+.++.+++. -+++|+|=--+- ...|+ .+ +..|+ +|-. .++||+++|++|+|||+-+. .+++
T Consensus 21 ~~~~ev~~~~~~~~~~~iP~d~i~lD~~~~--~~~~~--~~-f~~d~~~FPd---p~~mi~~L~~~G~kv~~~i~-P~v~ 91 (319)
T cd06591 21 KTQEELLDVAKEYRKRGIPLDVIVQDWFYW--PKQGW--GE-WKFDPERFPD---PKAMVRELHEMNAELMISIW-PTFG 91 (319)
T ss_pred CCHHHHHHHHHHHHHhCCCccEEEEechhh--cCCCc--ee-EEEChhhCCC---HHHHHHHHHHCCCEEEEEec-CCcC
Confidence 3677788888888876 567777742111 11121 12 34443 5544 57899999999999999554 4455
Q ss_pred CCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCC-CCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEeccc
Q 014892 120 GTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNF-HGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFA 198 (416)
Q Consensus 120 ~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a 198 (416)
.+++. |.-... .. ......++.. .. ..+ ....-+|+.||++++...+.++..+.+.|||||=+|..
T Consensus 92 ~~~~~----y~e~~~--~g----~~v~~~~g~~--~~-~~w~g~~~~~Dftnp~a~~w~~~~~~~~~~~~Gvdg~w~D~~ 158 (319)
T cd06591 92 PETEN----YKEMDE--KG----YLIKTDRGPR--VT-MQFGGNTRFYDATNPEAREYYWKQLKKNYYDKGVDAWWLDAA 158 (319)
T ss_pred CCChh----HHHHHH--CC----EEEEcCCCCe--ee-eeCCCCccccCCCCHHHHHHHHHHHHHHhhcCCCcEEEecCC
Confidence 43321 110000 00 0000011110 00 111 11345899999999998877765445999999999987
Q ss_pred CC
Q 014892 199 RG 200 (416)
Q Consensus 199 ~~ 200 (416)
..
T Consensus 159 Ep 160 (319)
T cd06591 159 EP 160 (319)
T ss_pred CC
Confidence 53
|
XylS has been characterized in Sulfolobus solfataricus where it hydrolyzes isoprimeverose, the p-nitrophenyl-beta derivative of isoprimeverose, and xyloglucan oligosaccharides, and has transxylosidic activity. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. The XylS family corresponds to subgroup 3 in the Ernst et al classification of GH31 enzymes. |
| >PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.04 Score=51.95 Aligned_cols=80 Identities=18% Similarity=0.301 Sum_probs=53.1
Q ss_pred cCceeEEEeeecCCCCCCcHHHHHhhhhhHHHcCCCEEEeCCCCCCCC--CCCcccccCCCCCCCCCCHHHHHHHHHHHH
Q 014892 26 NGREILFQGFNWESCKHDWWRNLERKVPDISKSGFTSVWLPPATHSFA--PEGYLPQNLYSLNSSYGSEHLLKALLHKMK 103 (416)
Q Consensus 26 ~~~~~~~q~f~~~~~~~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~--~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH 103 (416)
+|+++..++|...... + .-+.+-++.||++|+|+|=|.-.++... ..+| .+++ ...+.|+++|++|+
T Consensus 4 ~G~~v~~~G~n~~w~~--~-~~~~~~~~~~~~~G~n~VRi~v~~~~~~~~~~~~------~~~~--~~~~~ld~~v~~a~ 72 (281)
T PF00150_consen 4 NGKPVNWRGFNTHWYN--P-SITEADFDQLKALGFNTVRIPVGWEAYQEPNPGY------NYDE--TYLARLDRIVDAAQ 72 (281)
T ss_dssp TSEBEEEEEEEETTSG--G-GSHHHHHHHHHHTTESEEEEEEESTSTSTTSTTT------SBTH--HHHHHHHHHHHHHH
T ss_pred CCCeEEeeeeecccCC--C-CCHHHHHHHHHHCCCCEEEeCCCHHHhcCCCCCc------cccH--HHHHHHHHHHHHHH
Confidence 5777788888754100 1 1677889999999999998865432210 1111 1111 23688999999999
Q ss_pred HCCCEEEEEEccc
Q 014892 104 QHKVRAMADIVIN 116 (416)
Q Consensus 104 ~~Gi~VilD~V~N 116 (416)
++||+||+|+--.
T Consensus 73 ~~gi~vild~h~~ 85 (281)
T PF00150_consen 73 AYGIYVILDLHNA 85 (281)
T ss_dssp HTT-EEEEEEEES
T ss_pred hCCCeEEEEeccC
Confidence 9999999998543
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 5 GH5 from CAZY comprises enzymes with several known activities; endoglucanase (3.2.1.4 from EC); beta-mannanase (3.2.1.78 from EC); exo-1,3-glucanase (3.2.1.58 from EC); endo-1,6-glucanase (3.2.1.75 from EC); xylanase (3.2.1.8 from EC); endoglycoceramidase (3.2.1.123 from EC). The microbial degradation of cellulose and xylans requires several types of enzymes. Fungi and bacteria produces a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family A [] or as the glycosyl hydrolases family 5 []. One of the conserved regions in this family contains a conserved glutamic acid residue which is potentially involved [] in the catalytic mechanism.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3NDY_A 3NDZ_B 1LF1_A 1TVP_B 1TVN_A 3AYR_A 3AYS_A 1QI0_A 1W3K_A 1OCQ_A .... |
| >cd06602 GH31_MGAM_SI_GAA This family includes the following three closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), and lysosomal acid alpha-glucosidase (GAA), also known as acid-maltase | Back alignment and domain information |
|---|
Probab=95.00 E-value=0.065 Score=52.52 Aligned_cols=141 Identities=10% Similarity=0.128 Sum_probs=79.1
Q ss_pred cHHHHHhhhhhHHHcCC--CEEEeCCCCCCCCCCCcccccCCCCCC-CCCCHHHHHHHHHHHHHCCCEEEEEEccccCcC
Q 014892 44 WWRNLERKVPDISKSGF--TSVWLPPATHSFAPEGYLPQNLYSLNS-SYGSEHLLKALLHKMKQHKVRAMADIVINHRVG 120 (416)
Q Consensus 44 ~~~gi~~~LdyLk~LGv--~~I~L~Pi~~~~~~~GY~~~d~~~id~-~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~ 120 (416)
+-+.+.+.++.+++.|| ++|||-.-+.. +|. + +..|+ +|-.+. -++||+++|++|+||++=+.+ ++..
T Consensus 22 ~~~~v~~~~~~~r~~~iP~d~i~lD~~~~~----~~~--~-f~~d~~~FPdp~-~~~mi~~L~~~G~k~~~~i~P-~v~~ 92 (339)
T cd06602 22 NVDEVKEVVENMRAAGIPLDVQWNDIDYMD----RRR--D-FTLDPVRFPGLK-MPEFVDELHANGQHYVPILDP-AISA 92 (339)
T ss_pred CHHHHHHHHHHHHHhCCCcceEEECccccc----Ccc--c-eecccccCCCcc-HHHHHHHHHHCCCEEEEEEeC-cccc
Confidence 56778888888888775 67777432211 121 1 33332 343321 189999999999999996543 3433
Q ss_pred CCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCC-CCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccC
Q 014892 121 TTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNF-HGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFAR 199 (416)
Q Consensus 121 ~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~ 199 (416)
+.. .+.|..|... -.........++ .+..+..+ ....-+|+.||++++...+.++.++.+.|||||=+|...
T Consensus 93 ~~~--~~~~~~~~e~---~~~g~~v~~~~g--~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~~~~~Gvdg~w~D~~E 165 (339)
T cd06602 93 NEP--TGSYPPYDRG---LEMDVFIKNDDG--SPYIGKVWPGYTVFPDFLNPNTQEWWTDEIKDFHDQVPFDGLWIDMNE 165 (339)
T ss_pred CcC--CCCCHHHHHH---HHCCeEEECCCC--CEEEEEeCCCCCcCcCCCCHHHHHHHHHHHHHHHhcCCCcEEEecCCC
Confidence 211 0112111100 000000110111 01001111 112336899999999999999988877999999999875
Q ss_pred C
Q 014892 200 G 200 (416)
Q Consensus 200 ~ 200 (416)
.
T Consensus 166 p 166 (339)
T cd06602 166 P 166 (339)
T ss_pred C
Confidence 4
|
MGAM is one of the two enzymes responsible for catalyzing the last glucose-releasing step in starch digestion. SI is implicated in the digestion of dietary starch and major disaccharides such as sucrose and isomaltose, while GAA degrades glycogen in the lysosome, cleaving both alpha-1,4 and alpha-1,6 glucosidic linkages. MGAM and SI are anchored to small-intestinal brush-border epithelial cells. The absence of SI from the brush border membrane or its malfunction is associated with malabsorption disorders such as congenital sucrase-isomaltase deficiency (CSID). The domain architectures of MGAM and SI include two tandem GH31 catalytic domains, an N-terminal domain found near the membrane-bound end, and a C-terminal luminal domain. Both of |
| >cd06598 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide-synthesizing enzyme Z) is a bacterial 6-alpha-glucosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsY | Back alignment and domain information |
|---|
Probab=94.96 E-value=0.064 Score=52.04 Aligned_cols=137 Identities=10% Similarity=0.106 Sum_probs=78.5
Q ss_pred cHHHHHhhhhhHHHcCC--CEEEeCCCCCCC-C-CCCcccccCCCCC-CCCCCHHHHHHHHHHHHHCCCEEEEEEccccC
Q 014892 44 WWRNLERKVPDISKSGF--TSVWLPPATHSF-A-PEGYLPQNLYSLN-SSYGSEHLLKALLHKMKQHKVRAMADIVINHR 118 (416)
Q Consensus 44 ~~~gi~~~LdyLk~LGv--~~I~L~Pi~~~~-~-~~GY~~~d~~~id-~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~ 118 (416)
+-+.+.+.++.+++.|| ++|+|-.=+-.. . ...|. | +..| .+|-. .++||+++|++|+||++=+.+ ++
T Consensus 22 ~~~~v~~~~~~~~~~~iP~d~i~lD~~w~~~~~~~~~~~--~-f~wd~~~FPd---p~~mi~~L~~~G~k~~~~v~P-~v 94 (317)
T cd06598 22 NWQEVDDTIKTLREKDFPLDAAILDLYWFGKDIDKGHMG--N-LDWDRKAFPD---PAGMIADLAKKGVKTIVITEP-FV 94 (317)
T ss_pred CHHHHHHHHHHHHHhCCCceEEEEechhhcCcccCCcee--e-eEeccccCCC---HHHHHHHHHHcCCcEEEEEcC-cc
Confidence 56778888888888775 677775422110 0 01111 2 3334 35654 578999999999999997653 34
Q ss_pred cCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCC-CCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecc
Q 014892 119 VGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDN-FHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDF 197 (416)
Q Consensus 119 ~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~ 197 (416)
..+++. |.-... ..+ -+....++. +..... ....--+|+.||++++...+.++.+. +.|||||=+|.
T Consensus 95 ~~~~~~----y~e~~~--~g~---l~~~~~~~~--~~~~~~w~g~~~~~Dftnp~a~~w~~~~~~~~~-~~Gvdg~w~D~ 162 (317)
T cd06598 95 LKNSKN----WGEAVK--AGA---LLKKDQGGV--PTLFDFWFGNTGLIDWFDPAAQAWFHDNYKKLI-DQGVTGWWGDL 162 (317)
T ss_pred cCCchh----HHHHHh--CCC---EEEECCCCC--EeeeeccCCCccccCCCCHHHHHHHHHHHHHhh-hCCccEEEecC
Confidence 443331 100000 000 001101110 000000 11123467899999999999998875 89999999998
Q ss_pred cC
Q 014892 198 AR 199 (416)
Q Consensus 198 a~ 199 (416)
..
T Consensus 163 ~E 164 (317)
T cd06598 163 GE 164 (317)
T ss_pred CC
Confidence 64
|
CtsZ and CtsY both have a glycosyl hydrolase family 31 (GH31) catalytic domain. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. |
| >PRK10658 putative alpha-glucosidase; Provisional | Back alignment and domain information |
|---|
Probab=94.94 E-value=0.051 Score=57.96 Aligned_cols=95 Identities=15% Similarity=0.048 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHCCCEEEEEEccccCcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCC-CCCCCCCcCCCCCHH
Q 014892 94 LLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTG-DNFHGVPNIDHTQHF 172 (416)
Q Consensus 94 d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dln~~~~~ 172 (416)
+.+.||+++|++|+||++=+.+ +++.+++. |... -.........++.. +.. .+.....-+|+.||+
T Consensus 326 dp~~mi~~L~~~G~k~~~~i~P-~i~~~s~~-------f~e~---~~~gy~vk~~~G~~--~~~~~W~g~~~~~Dftnp~ 392 (665)
T PRK10658 326 DPEGMLKRLKAKGLKICVWINP-YIAQKSPL-------FKEG---KEKGYLLKRPDGSV--WQWDKWQPGMAIVDFTNPD 392 (665)
T ss_pred CHHHHHHHHHHCCCEEEEeccC-CcCCCchH-------HHHH---HHCCeEEECCCCCE--eeeeecCCCceeecCCCHH
Confidence 4578999999999999986544 34443321 1100 00000111111111 111 111233458999999
Q ss_pred HHHHHHHHHHHHHHhcCCCeEEecccCCCc
Q 014892 173 VRKDIIAWLRWLRNTVGFQDFRFDFARGYS 202 (416)
Q Consensus 173 v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~ 202 (416)
+|+...+.++.++ +.|||||-.|....+|
T Consensus 393 ar~W~~~~~~~l~-d~Gvdgfw~D~gE~~p 421 (665)
T PRK10658 393 ACKWYADKLKGLL-DMGVDCFKTDFGERIP 421 (665)
T ss_pred HHHHHHHHHHHHH-hcCCcEEEecCCceee
Confidence 9999999999987 8999999999765444
|
|
| >PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=94.94 E-value=0.1 Score=50.69 Aligned_cols=53 Identities=15% Similarity=0.125 Sum_probs=36.3
Q ss_pred HhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEc
Q 014892 49 ERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIV 114 (416)
Q Consensus 49 ~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V 114 (416)
.+.++.||+.|+|.|=|=- +..|.. ..+-+.++..+|.++|++.||+|+||+=
T Consensus 27 ~d~~~ilk~~G~N~vRlRv-wv~P~~------------~g~~~~~~~~~~akrak~~Gm~vlldfH 79 (332)
T PF07745_consen 27 KDLFQILKDHGVNAVRLRV-WVNPYD------------GGYNDLEDVIALAKRAKAAGMKVLLDFH 79 (332)
T ss_dssp --HHHHHHHTT--EEEEEE--SS-TT------------TTTTSHHHHHHHHHHHHHTT-EEEEEE-
T ss_pred CCHHHHHHhcCCCeEEEEe-ccCCcc------------cccCCHHHHHHHHHHHHHCCCeEEEeec
Confidence 5678899999999986632 222111 4556789999999999999999999993
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This domain is found in family 53 of the glycosyl hydrolase classification []. These enzymes are endo-1,4- beta-galactanases (3.2.1.89 from EC). The structure of this domain is known [] and has a TIM barrel fold.; GO: 0015926 glucosidase activity; PDB: 1HJQ_A 1HJS_A 1HJU_B 1FHL_A 1FOB_A 2GFT_A 1UR4_B 1UR0_A 1R8L_B 2CCR_A .... |
| >COG3589 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=94.89 E-value=0.099 Score=49.87 Aligned_cols=56 Identities=18% Similarity=0.186 Sum_probs=38.3
Q ss_pred HHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEcc
Q 014892 46 RNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVI 115 (416)
Q Consensus 46 ~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~ 115 (416)
..-++-|+.-.+.|++.|..+=.......+ +-..-|++|++.||+.||+||+|+-+
T Consensus 16 ~~~~~Yi~~~~~~Gf~~IFtsl~~~~~~~~--------------~~~~~~~ell~~Anklg~~vivDvnP 71 (360)
T COG3589 16 EKDIAYIDRMHKYGFKRIFTSLLIPEEDAE--------------LYFHRFKELLKEANKLGLRVIVDVNP 71 (360)
T ss_pred hhHHHHHHHHHHcCccceeeecccCCchHH--------------HHHHHHHHHHHHHHhcCcEEEEEcCH
Confidence 344555666677888888765433332111 22456999999999999999999854
|
|
| >cd06542 GH18_EndoS-like Endo-beta-N-acetylglucosaminidases are bacterial chitinases that hydrolyze the chitin core of various asparagine (N)-linked glycans and glycoproteins | Back alignment and domain information |
|---|
Probab=94.83 E-value=0.15 Score=47.72 Aligned_cols=64 Identities=11% Similarity=0.066 Sum_probs=47.6
Q ss_pred CHHHHHHHHHHHHHCCCEEEEEEccccCcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCC
Q 014892 91 SEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQ 170 (416)
Q Consensus 91 t~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~ 170 (416)
+.++.++.|+.+|++|+||++=+--+|.+... ....+
T Consensus 49 ~~~~~~~~i~~l~~kG~KVl~sigg~~~~~~~-------------------------------------------~~~~~ 85 (255)
T cd06542 49 LLTNKETYIRPLQAKGTKVLLSILGNHLGAGF-------------------------------------------ANNLS 85 (255)
T ss_pred hhHHHHHHHHHHhhCCCEEEEEECCCCCCCCc-------------------------------------------cccCC
Confidence 46889999999999999999966444332200 01124
Q ss_pred HHHHHHHHHHHHHHHHhcCCCeEEecc
Q 014892 171 HFVRKDIIAWLRWLRNTVGFQDFRFDF 197 (416)
Q Consensus 171 ~~v~~~l~~~~~~w~~~~gvDGfRlD~ 197 (416)
++-++.+.+.+..++..+|.||+=+|-
T Consensus 86 ~~~~~~fa~~l~~~v~~yglDGiDiD~ 112 (255)
T cd06542 86 DAAAKAYAKAIVDTVDKYGLDGVDFDD 112 (255)
T ss_pred HHHHHHHHHHHHHHHHHhCCCceEEee
Confidence 566778888888888899999999995
|
The endo-beta-N-acetylglucosaminidases have a glycosyl hydrolase family 18 (GH18) catalytic domain. Some members also have an additional C-terminal glycosyl hydrolase family 20 (GH20) domain while others have an N-terminal domain of unknown function (pfam08522). Members of this family include endo-beta-N-acetylglucosaminidase S (EndoS) from Streptococcus pyogenes, EndoF1, EndoF2, EndoF3, and EndoH from Flavobacterium meningosepticum, and EndoE from Enterococcus faecalis. EndoS is a secreted endoglycosidase from Streptococcus pyogenes that specifically hydrolyzes the glycan on human IgG between two core N-acetylglucosamine residues. EndoE is a secreted endoglycosidase, encoded by the ndoE gene in Enterococcus faecalis, that hydrolyzes the glycan on human RNase B. |
| >PRK10426 alpha-glucosidase; Provisional | Back alignment and domain information |
|---|
Probab=94.80 E-value=0.12 Score=54.86 Aligned_cols=140 Identities=10% Similarity=0.080 Sum_probs=76.0
Q ss_pred HHHHHhhhhhHHHcC--CCEEEeCCCCCCC--CCCCccc-ccCCCCC-CCCCCHHHHHHHHHHHHHCCCEEEEEEccccC
Q 014892 45 WRNLERKVPDISKSG--FTSVWLPPATHSF--APEGYLP-QNLYSLN-SSYGSEHLLKALLHKMKQHKVRAMADIVINHR 118 (416)
Q Consensus 45 ~~gi~~~LdyLk~LG--v~~I~L~Pi~~~~--~~~GY~~-~d~~~id-~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~ 118 (416)
-+.+.+.++.+++.| +++|||- -+... ...|... -| +..| .+|- +.++||+++|++|+||++=+-+- +
T Consensus 220 ~~~v~~v~~~~r~~~IP~d~i~ld-dw~~~~~~~~g~~~~~~-~~~d~~~FP---dp~~mi~~L~~~G~k~v~~i~P~-v 293 (635)
T PRK10426 220 TEVVQKKLDTMRNAGVKVNGIWAQ-DWSGIRMTSFGKRLMWN-WKWDSERYP---QLDSRIKQLNEEGIQFLGYINPY-L 293 (635)
T ss_pred HHHHHHHHHHHHHcCCCeeEEEEe-ccccccccccccccccc-ceEChhhCC---CHHHHHHHHHHCCCEEEEEEcCc-c
Confidence 355777788888877 5888884 12111 0111111 01 1233 2333 57889999999999999976543 3
Q ss_pred cCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCC-CCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecc
Q 014892 119 VGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNF-HGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDF 197 (416)
Q Consensus 119 ~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~ 197 (416)
..+++ .|... -.........++.. .....+ ....-+|+.||++|+...+.++..+.+.|||||=+|.
T Consensus 294 ~~~~~-------~y~e~---~~~gy~vk~~~g~~--~~~~~~~~~~~~~Dftnp~ar~Ww~~~~~~~~~~~Gvdg~w~D~ 361 (635)
T PRK10426 294 ASDGD-------LCEEA---AEKGYLAKDADGGD--YLVEFGEFYAGVVDLTNPEAYEWFKEVIKKNMIGLGCSGWMADF 361 (635)
T ss_pred CCCCH-------HHHHH---HHCCcEEECCCCCE--EEeEecCCCceeecCCCHHHHHHHHHHHHHHHhhcCCCEEeeeC
Confidence 33222 11100 00000011111110 000000 0112478999999999999887555599999999997
Q ss_pred cCCCc
Q 014892 198 ARGYS 202 (416)
Q Consensus 198 a~~~~ 202 (416)
...+|
T Consensus 362 ~E~~p 366 (635)
T PRK10426 362 GEYLP 366 (635)
T ss_pred CCCCC
Confidence 65443
|
|
| >cd06600 GH31_MGAM-like This family includes the following closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), lysosomal acid alpha-glucosidase (GAA), neutral alpha-glucosidase C (GANC), the alpha subunit of neutral alpha-glucosidase AB (GANAB), and alpha-glucosidase II | Back alignment and domain information |
|---|
Probab=94.78 E-value=0.073 Score=51.66 Aligned_cols=137 Identities=15% Similarity=0.141 Sum_probs=80.5
Q ss_pred CcHHHHHhhhhhHHHcCC--CEEEeCCCCCCCCCCCcccccCCCCCC-CCCCHHHHHHHHHHHHHCCCEEEEEEccccCc
Q 014892 43 DWWRNLERKVPDISKSGF--TSVWLPPATHSFAPEGYLPQNLYSLNS-SYGSEHLLKALLHKMKQHKVRAMADIVINHRV 119 (416)
Q Consensus 43 G~~~gi~~~LdyLk~LGv--~~I~L~Pi~~~~~~~GY~~~d~~~id~-~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~ 119 (416)
.+-+.+.+.++.+++.|| ++|||-.=+. .+|.. +..|+ +|- +.++||+++|++|+||++=+.+ +++
T Consensus 21 ~~~~~v~~~~~~~~~~~iP~d~i~lD~~~~----~~~~~---f~~d~~~FP---dp~~~i~~l~~~g~k~~~~~~P-~i~ 89 (317)
T cd06600 21 YPQDKVVEVVDIMQKEGFPYDVVFLDIHYM----DSYRL---FTWDPYRFP---EPKKLIDELHKRNVKLVTIVDP-GIR 89 (317)
T ss_pred CCHHHHHHHHHHHHHcCCCcceEEEChhhh----CCCCc---eeechhcCC---CHHHHHHHHHHCCCEEEEEeec-ccc
Confidence 467788888888888775 6777753221 12321 33343 454 5679999999999999995543 344
Q ss_pred CCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCC-CCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEeccc
Q 014892 120 GTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHG-VPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFA 198 (416)
Q Consensus 120 ~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a 198 (416)
.+.. +..|... ......+...++. +..+..+++ ..-+|+.||++++...+.++..+.+.|||||=+|..
T Consensus 90 ~~~~-----~~~~~~~---~~~~~~v~~~~g~--~~~~~~w~G~~~~~Dftnp~a~~ww~~~~~~~~~~~gvdg~w~D~~ 159 (317)
T cd06600 90 VDQN-----YSPFLSG---MDKGKFCEIESGE--LFVGKMWPGTTVYPDFTNPDTREWWAGLFSEWLNSQGVDGIWLDMN 159 (317)
T ss_pred CCCC-----ChHHHHH---HHCCEEEECCCCC--eEEEeecCCCccccCCCChHHHHHHHHHHHHHhhcCCCceEEeeCC
Confidence 3211 1111100 0000011111111 011111111 224799999999999999998877999999999987
Q ss_pred CC
Q 014892 199 RG 200 (416)
Q Consensus 199 ~~ 200 (416)
..
T Consensus 160 Ep 161 (317)
T cd06600 160 EP 161 (317)
T ss_pred CC
Confidence 53
|
MGAM is one of the two enzymes responsible for catalyzing the last glucose-releasing step in starch digestion. SI is implicated in the digestion of dietary starch and major disaccharides such as sucrose and isomaltose, while GAA degrades glycogen in the lysosome, cleaving both alpha-1,4 and alpha-1,6 glucosidic linkages. MGAM and SI are anchored to small-intestinal brush-border epithelial cells. The absence of SI from the brush border membrane or its malfunction is associated with malabsorption disorders such as congenital sucrase-isomaltase deficiency (CSID). The domain architectures of MGAM and SI include two tandem GH31 catalytic domains, an N-terminal do |
| >PF05913 DUF871: Bacterial protein of unknown function (DUF871); InterPro: IPR008589 This family consists of several conserved hypothetical proteins from bacteria and archaea | Back alignment and domain information |
|---|
Probab=94.51 E-value=0.041 Score=54.02 Aligned_cols=60 Identities=18% Similarity=0.217 Sum_probs=40.8
Q ss_pred CcHHHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccc
Q 014892 43 DWWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVIN 116 (416)
Q Consensus 43 G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~N 116 (416)
++++...+-|.-.+++|++.|+.+=..+- +..=...+.|++|++.||+.||+||+|+-+.
T Consensus 11 ~~~~~~~~yi~~a~~~Gf~~iFTSL~ipe--------------~~~~~~~~~~~~l~~~a~~~~~~v~~Disp~ 70 (357)
T PF05913_consen 11 SSFEENKAYIEKAAKYGFKRIFTSLHIPE--------------DDPEDYLERLKELLKLAKELGMEVIADISPK 70 (357)
T ss_dssp S-HHHHHHHHHHHHCTTEEEEEEEE-----------------------HHHHHHHHHHHHHHCT-EEEEEE-CC
T ss_pred CCHHHHHHHHHHHHHCCCCEEECCCCcCC--------------CCHHHHHHHHHHHHHHHHHCCCEEEEECCHH
Confidence 36777888888889999999987521111 0011136889999999999999999999554
|
The function of this family is unknown though a number are annotated as outer surface proteins.; PDB: 2P0O_A 1X7F_A. |
| >PF01055 Glyco_hydro_31: Glycosyl hydrolases family 31 ; InterPro: IPR000322 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=93.74 E-value=0.049 Score=55.41 Aligned_cols=136 Identities=14% Similarity=0.255 Sum_probs=75.9
Q ss_pred cHHHHHhhhhhHHHcCC--CEEEeCCCCCCCCCCCcccccCCCCCC-CCCCHHHHHHHHHHHHHCCCEEEEEEccccCcC
Q 014892 44 WWRNLERKVPDISKSGF--TSVWLPPATHSFAPEGYLPQNLYSLNS-SYGSEHLLKALLHKMKQHKVRAMADIVINHRVG 120 (416)
Q Consensus 44 ~~~gi~~~LdyLk~LGv--~~I~L~Pi~~~~~~~GY~~~d~~~id~-~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~ 120 (416)
+-+.+.+-++.+++.|| ++|+|-.-+.. +|. + +..|+ +|- +.++|++.+|++|++|++-+.+ ++..
T Consensus 41 ~~~~v~~~i~~~~~~~iP~d~~~iD~~~~~----~~~--~-f~~d~~~FP---d~~~~~~~l~~~G~~~~~~~~P-~v~~ 109 (441)
T PF01055_consen 41 NQDEVREVIDRYRSNGIPLDVIWIDDDYQD----GYG--D-FTWDPERFP---DPKQMIDELHDQGIKVVLWVHP-FVSN 109 (441)
T ss_dssp SHHHHHHHHHHHHHTT--EEEEEE-GGGSB----TTB--T-T-B-TTTTT---THHHHHHHHHHTT-EEEEEEES-EEET
T ss_pred CHHHHHHHHHHHHHcCCCccceeccccccc----ccc--c-ccccccccc---chHHHHHhHhhCCcEEEEEeec-ccCC
Confidence 46778888888887765 56665443222 111 2 34443 443 7899999999999999998887 3544
Q ss_pred CCCCCCCcccccCC-CCCCCCCCceecCCCCCCCCCCCCCCC-CCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEeccc
Q 014892 121 TTQGHGGKYNRYDG-IPLSWDEHAVTSCTGGLGNGSTGDNFH-GVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFA 198 (416)
Q Consensus 121 ~~~~~~~~~~~f~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a 198 (416)
+.+ .+..|.. ...++ .....++ .+..+..+. ...-+|+.||++++...+.++..+..+|||||-+|..
T Consensus 110 ~~~----~~~~~~~~~~~~~----~v~~~~g--~~~~~~~w~g~~~~~Dftnp~a~~w~~~~~~~~~~~~Gvdg~w~D~~ 179 (441)
T PF01055_consen 110 DSP----DYENYDEAKEKGY----LVKNPDG--SPYIGRVWPGKGGFIDFTNPEARDWWKEQLKELLDDYGVDGWWLDFG 179 (441)
T ss_dssp TTT----B-HHHHHHHHTT-----BEBCTTS--SB-EEEETTEEEEEB-TTSHHHHHHHHHHHHHHHTTST-SEEEEEST
T ss_pred CCC----cchhhhhHhhcCc----eeecccC--CcccccccCCcccccCCCChhHHHHHHHHHHHHHhccCCceEEeecC
Confidence 432 1111110 00000 0111111 001111111 1334789999999999999999987779999999995
Q ss_pred CC
Q 014892 199 RG 200 (416)
Q Consensus 199 ~~ 200 (416)
..
T Consensus 180 E~ 181 (441)
T PF01055_consen 180 EP 181 (441)
T ss_dssp TT
T ss_pred Cc
Confidence 43
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 31 GH31 from CAZY comprises enzymes with several known activities; alpha-glucosidase (3.2.1.20 from EC), alpha-galactosidase (3.2.1.22 from EC); glucoamylase (3.2.1.3 from EC), sucrase-isomaltase (3.2.1.48 from EC); isomaltase (3.2.1.10 from EC); alpha-xylosidase (3.2.1 from EC); alpha-glucan lyase (4.2.2.13 from EC). Glycoside hydrolase family 31 groups a number of glycosyl hydrolases on the basis of sequence similarities [, , ] An aspartic acid has been implicated [] in the catalytic activity of sucrase, isomaltase, and lysosomal alpha-glucosidase.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3L4U_A 3L4X_A 3L4W_A 3L4V_A 3CTT_A 2QMJ_A 2QLY_A 3L4Z_A 3L4Y_A 3L4T_A .... |
| >KOG3625 consensus Alpha amylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.67 E-value=0.9 Score=48.97 Aligned_cols=64 Identities=11% Similarity=0.227 Sum_probs=47.8
Q ss_pred CCCCcCCCC-----CHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcHHHHHHHHHhc---CC-ceEEEcccCCC
Q 014892 161 HGVPNIDHT-----QHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGA---RP-IFSVGEYWDSC 226 (416)
Q Consensus 161 ~~~~dln~~-----~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~~~~~~~~~~~---~~-~~~vgE~~~~~ 226 (416)
.+-.+|+|. +|.++++|.++...=. .=.||+|+|.++..|...-+-+.+++ +| .|.++|.+.+.
T Consensus 496 GDsVKLryG~kpeDsPyLWq~M~kY~e~tA--riFdG~RlDNcHsTPlHVaEylLd~ARk~nPnlYVvAELFtgS 568 (1521)
T KOG3625|consen 496 GDSVKLRYGNKPEDSPYLWQHMKKYTEITA--RIFDGVRLDNCHSTPLHVAEYLLDAARKLNPNLYVVAELFTGS 568 (1521)
T ss_pred cceeeeccCCCcccChHHHHHHHHHHHHHH--HHhcceeeccCCCCchhHHHHHHHHHHhcCCCeEEEeeeccCC
Confidence 444567775 4889999998877653 55799999999999877666555554 45 78999988763
|
|
| >cd06562 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides | Back alignment and domain information |
|---|
Probab=93.46 E-value=0.76 Score=45.19 Aligned_cols=121 Identities=12% Similarity=0.168 Sum_probs=70.4
Q ss_pred cHHHHHhhhhhHHHcCCCEEEeC-------C----CCCCCCCCC-cccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
Q 014892 44 WWRNLERKVPDISKSGFTSVWLP-------P----ATHSFAPEG-YLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMA 111 (416)
Q Consensus 44 ~~~gi~~~LdyLk~LGv~~I~L~-------P----i~~~~~~~G-Y~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~Vil 111 (416)
..+-|.+.+|.++.+++|.++|- | -++.-...| |.+ + .+=|.+|+++||+-|.++||.||-
T Consensus 16 ~~~~ik~~Id~ma~~KlN~lh~HltDd~~~rle~~~~P~Lt~~ga~~~------~-~~YT~~di~eiv~yA~~rgI~vIP 88 (348)
T cd06562 16 SVDSIKRTIDAMAYNKLNVLHWHITDSQSFPLESPSYPELSKKGAYSP------S-EVYTPEDVKEIVEYARLRGIRVIP 88 (348)
T ss_pred CHHHHHHHHHHHHHhCCcEEEEeEEcCCCceEeeCCCchhhhccCcCC------C-ceECHHHHHHHHHHHHHcCCEEEE
Confidence 36677788888899999999872 1 111111111 221 1 112899999999999999999998
Q ss_pred EE-ccccCcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcC
Q 014892 112 DI-VINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVG 189 (416)
Q Consensus 112 D~-V~NH~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~g 189 (416)
.+ +|.|+..-... | +.-.+...+.+.. .+.-.....||..+|++.+++.+++...++-+.
T Consensus 89 EID~PGH~~a~~~~----~-----------p~l~~~~~~~~~~---~~~~~~~~~L~~~~~~t~~fl~~vl~E~~~lF~ 149 (348)
T cd06562 89 EIDTPGHTGSWGQG----Y-----------PELLTGCYAVWRK---YCPEPPCGQLNPTNPKTYDFLKTLFKEVSELFP 149 (348)
T ss_pred eccCchhhHHHHHh----C-----------hhhhCCCCccccc---cccCCCCccccCCChhHHHHHHHHHHHHHHhcC
Confidence 87 34555441110 0 0000000000000 000011224889999999999999998886443
|
The hexA and hexB genes encode the alpha- and beta-subunits of the two major beta-N-acetylhexosaminidase isoenzymes, N-acetyl-beta-D-hexosaminidase A (HexA) and beta-N-acetylhexosaminidase B (HexB). Both the alpha and the beta catalytic subunits have a TIM-barrel fold and belong to the glycosyl hydrolase family 20 (GH20). The HexA enzyme is a heterodimer containing one alpha and one beta subunit while the HexB enzyme is a homodimer containing two beta-subunits. Hexosaminidase mutations cause an inability to properly hydrolyze certain sphingolipids which accumulate in lysosomes within the brain, resulting in the lipid storage disorders Tay-Sachs and Sandhoff. Mutations in the alpha subunit cause in a deficiency in the HexA enzyme and result in |
| >PF02446 Glyco_hydro_77: 4-alpha-glucanotransferase; InterPro: IPR003385 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=93.43 E-value=0.29 Score=50.58 Aligned_cols=44 Identities=18% Similarity=0.210 Sum_probs=25.7
Q ss_pred CcH-HHHHhhhhhHHHcCCCEEEeCCCCCCCC--CCCcccccCCCCC
Q 014892 43 DWW-RNLERKVPDISKSGFTSVWLPPATHSFA--PEGYLPQNLYSLN 86 (416)
Q Consensus 43 G~~-~gi~~~LdyLk~LGv~~I~L~Pi~~~~~--~~GY~~~d~~~id 86 (416)
||| ..+.+-++.+++.|+..+.|.|+++... +..|.+.+-++++
T Consensus 15 GDfg~dl~~~~d~~~~~G~~i~qllpl~pt~~~~~sPY~p~S~~alN 61 (496)
T PF02446_consen 15 GDFGDDLYQFIDWAAEAGQSIWQLLPLNPTGPGNSSPYSPSSRFALN 61 (496)
T ss_dssp --SSHHHHHHHHHHHHCT--EEE----S-B-TTCTTTTSBS-SSS--
T ss_pred ecHHHHHHHHHHHHHHcCCCeeccccccCCCCCCCCCCCCCCCCcCC
Confidence 799 9999999999999999999999997642 2367777666655
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The enzymes in this entry (2.4.1.25 from EC) belong to the glycoside hydrolase family 77 GH77 from CAZY, and transfer a segment of a (1,4)-alpha-D-glucan to a new 4-position in an acceptor, which may be glucose or (1,4)-alpha-D-glucan []. They belong to the disproportionating family of enzymes.; GO: 0004134 4-alpha-glucanotransferase activity, 0005975 carbohydrate metabolic process; PDB: 1TZ7_A 2X1I_A 2OWX_A 2OWW_A 1FP9_A 1CWY_A 1ESW_A 1FP8_A 2OWC_A 1X1N_A. |
| >TIGR00217 malQ 4-alpha-glucanotransferase | Back alignment and domain information |
|---|
Probab=93.35 E-value=0.78 Score=47.47 Aligned_cols=46 Identities=9% Similarity=-0.067 Sum_probs=35.8
Q ss_pred cCceeEEEeeecCCC-CCCcHHHHH-hhhhhHHHcCCCEEEeCCCCCC
Q 014892 26 NGREILFQGFNWESC-KHDWWRNLE-RKVPDISKSGFTSVWLPPATHS 71 (416)
Q Consensus 26 ~~~~~~~q~f~~~~~-~~G~~~gi~-~~LdyLk~LGv~~I~L~Pi~~~ 71 (416)
..-||++|+|-=.+. .=|||..+. .-++.+++.|....+|.|+++.
T Consensus 14 R~~Gvll~l~SL~s~~GIGDfg~la~~~~d~~~~~g~~~wqllpl~p~ 61 (513)
T TIGR00217 14 RKSGILLQLYSLPSEWGIGDLGDGAYKFIDFLKAGSQSVWQIHALYPA 61 (513)
T ss_pred CceEEEeccccCCCCCCccChHHHHHHHHHHHHHcCCcEEEeCCCCCC
Confidence 356899999975443 338998887 5568889988998899999874
|
This enzyme is known as amylomaltase and disproportionating enzyme. |
| >smart00632 Aamy_C Aamy_C domain | Back alignment and domain information |
|---|
Probab=92.72 E-value=0.33 Score=36.83 Aligned_cols=35 Identities=17% Similarity=0.058 Sum_probs=26.2
Q ss_pred cCCEEEEEECCEEEEEEcCCCCC--------CCCCCcEEeeeC
Q 014892 374 QSNLYSAIIGDKVCMKIGDGSWC--------PAGKEWTLATSG 408 (416)
Q Consensus 374 ~~~~~~~~R~~~~lvvinn~~~~--------~~~~~~~~~ls~ 408 (416)
++++++|.|+++.+|+||++... .+.|.|+++++|
T Consensus 7 ~~~~laF~Rg~~g~VaiN~~~~~~~~~~~t~lp~G~Y~d~l~g 49 (81)
T smart00632 7 GDNQIAFERGSKGFVAINRSDSDLTITLQTSLPAGTYCDVISG 49 (81)
T ss_pred CCeEEEEECCCeEEEEEECCCCceEEEEeecCCCcceEEEecC
Confidence 34599999999999999996421 123678888883
|
|
| >cd06604 GH31_glucosidase_II_MalA Alpha-glucosidase II (alpha-D-glucoside glucohydrolase) is a glycosyl hydrolase family 31 (GH31) enzyme, found in bacteria and plants, which has exo-alpha-1,4-glucosidase and oligo-1,6-glucosidase activities | Back alignment and domain information |
|---|
Probab=92.61 E-value=0.31 Score=47.79 Aligned_cols=134 Identities=12% Similarity=0.111 Sum_probs=78.6
Q ss_pred cHHHHHhhhhhHHHcCC--CEEEeCCCCCCCCCCCcccccCCCCCC-CCCCHHHHHHHHHHHHHCCCEEEEEEccccCcC
Q 014892 44 WWRNLERKVPDISKSGF--TSVWLPPATHSFAPEGYLPQNLYSLNS-SYGSEHLLKALLHKMKQHKVRAMADIVINHRVG 120 (416)
Q Consensus 44 ~~~gi~~~LdyLk~LGv--~~I~L~Pi~~~~~~~GY~~~d~~~id~-~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~ 120 (416)
+-+.+.+.++.+++.|| ++|||-+-+.. +|.. +..|+ +|- +.++|++++|++|++|++=+.+ |+..
T Consensus 22 ~~~~v~~~~~~~~~~~iP~d~i~lD~~~~~----~~~~---f~~d~~~fP---dp~~m~~~l~~~g~~~~~~~~P-~v~~ 90 (339)
T cd06604 22 PEEEVREIADEFRERDIPCDAIYLDIDYMD----GYRV---FTWDKERFP---DPKELIKELHEQGFKVVTIIDP-GVKV 90 (339)
T ss_pred CHHHHHHHHHHHHHhCCCcceEEECchhhC----CCCc---eeeccccCC---CHHHHHHHHHHCCCEEEEEEeC-ceeC
Confidence 56778888999998886 67887543332 2221 33443 554 4589999999999999986544 3332
Q ss_pred CCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCC-CCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccC
Q 014892 121 TTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFH-GVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFAR 199 (416)
Q Consensus 121 ~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~ 199 (416)
+. .|..|... -....+....++. +..+..+. ...-+|+.||++++...+.++..+ +.|||||=+|...
T Consensus 91 ~~-----~~~~~~e~---~~~g~~v~~~~g~--~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~~-~~Gvdg~w~D~~E 159 (339)
T cd06604 91 DP-----GYDVYEEG---LENDYFVKDPDGE--LYIGRVWPGLSAFPDFTNPKVREWWGSLYKKFV-DLGVDGIWNDMNE 159 (339)
T ss_pred CC-----CChHHHHH---HHCCeEEECCCCC--EEEEEecCCCccccCCCChHHHHHHHHHHHHHh-hCCCceEeecCCC
Confidence 11 11111100 0000000001111 00011111 122368999999999999999887 8999999999764
|
Alpha-glucosidase II has been characterized in Bacillus thermoamyloliquefaciens where it forms a homohexamer. This family also includes the MalA alpha-glucosidase from Sulfolobus sulfataricus and the AglA alpha-glucosidase from Picrophilus torridus. MalA is part of the carbohydrate-metabolizing machinery that allows this organism to utilize carbohydrates, such as maltose, as the sole carbon and energy source. |
| >cd02875 GH18_chitobiase Chitobiase (also known as di-N-acetylchitobiase) is a lysosomal glycosidase that hydrolyzes the reducing-end N-acetylglucosamine from the chitobiose core of oligosaccharides during the ordered degradation of asparagine-linked glycoproteins in eukaryotes | Back alignment and domain information |
|---|
Probab=92.51 E-value=0.32 Score=48.05 Aligned_cols=47 Identities=15% Similarity=0.102 Sum_probs=35.7
Q ss_pred CCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCc---------HHHHHHHHHhcC
Q 014892 168 HTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYS---------AKYVKEYIEGAR 214 (416)
Q Consensus 168 ~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~---------~~~~~~~~~~~~ 214 (416)
..+|+.|+.+++.+.-+++++|.||+-+|-=.... ..|+++++++++
T Consensus 91 l~~~~~R~~fi~siv~~~~~~gfDGIdIDwE~p~~~~~~d~~~~t~llkelr~~l~ 146 (358)
T cd02875 91 ISNPTYRTQWIQQKVELAKSQFMDGINIDIEQPITKGSPEYYALTELVKETTKAFK 146 (358)
T ss_pred cCCHHHHHHHHHHHHHHHHHhCCCeEEEcccCCCCCCcchHHHHHHHHHHHHHHHh
Confidence 35788899999998888899999999999643221 246777777664
|
Chitobiase can only do so if the asparagine that joins the oligosaccharide to protein is previously removed by a glycosylasparaginase. Chitobiase is therefore the final step in the lysosomal degradation of the protein/carbohydrate linkage component of asparagine-linked glycoproteins. The catalytic domain of chitobiase is an eight-stranded alpha/beta barrel fold similar to that of other family 18 glycosyl hydrolases such as hevamine and chitotriosidase. |
| >cd06570 GH20_chitobiase-like_1 A functionally uncharacterized subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the chitobiase of Serratia marcescens, a beta-N-1,4-acetylhexosaminidase that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin | Back alignment and domain information |
|---|
Probab=92.41 E-value=1.5 Score=42.33 Aligned_cols=124 Identities=10% Similarity=0.050 Sum_probs=68.9
Q ss_pred cHHHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCC-----CCCCCCHHHHHHHHHHHHHCCCEEEEEE-cccc
Q 014892 44 WWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSL-----NSSYGSEHLLKALLHKMKQHKVRAMADI-VINH 117 (416)
Q Consensus 44 ~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~i-----d~~~Gt~~d~~~Lv~~aH~~Gi~VilD~-V~NH 117 (416)
..+-|.+.||.++.+++|.+++-=. +. ..+.+.+..|=.+ ...+=|.+|+++||+-|.++||+||-.+ ++.|
T Consensus 16 ~~~~ik~~Id~ma~~KlN~lh~Hlt-Dd-~~~rle~~~~P~lt~~g~~~~~yT~~di~elv~yA~~rgI~vIPEId~PGH 93 (311)
T cd06570 16 PVAVIKRQLDAMASVKLNVFHWHLT-DD-QGFRIESKKYPKLQQKASDGLYYTQEQIREVVAYARDRGIRVVPEIDVPGH 93 (311)
T ss_pred CHHHHHHHHHHHHHhCCeEEEEEEe-cC-CCceeecCCCccccccCCCCCccCHHHHHHHHHHHHHcCCEEEEeecCccc
Confidence 4677888889999999998877200 00 0011111111111 0112379999999999999999999777 3556
Q ss_pred CcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHh
Q 014892 118 RVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNT 187 (416)
Q Consensus 118 ~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~ 187 (416)
+..-.. .|..+.. . ...... .. ..-..-+.||..+|++.+++.+++.-+++-
T Consensus 94 ~~a~~~----~ypel~~-------~-----~~~~~~-~~-~~~~~~~~l~~~~p~t~~f~~~l~~E~~~l 145 (311)
T cd06570 94 ASAIAV----AYPELAS-------G-----PGPYVI-ER-GWGVFEPLLDPTNEETYTFLDNLFGEMAEL 145 (311)
T ss_pred hHHHHH----hCHHhcc-------C-----CCcccc-cc-ccccCCCccCCCChhHHHHHHHHHHHHHHh
Confidence 654110 0100000 0 000000 00 000111358999999999999999888743
|
Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This subgroup lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. |
| >cd06595 GH31_xylosidase_XylS-like This family represents an uncharacterized glycosyl hydrolase family 31 (GH31) enzyme found in bacteria and eukaryotes that is related to the XylS xylosidase of Sulfolobus solfataricus | Back alignment and domain information |
|---|
Probab=92.37 E-value=0.27 Score=47.12 Aligned_cols=130 Identities=13% Similarity=0.094 Sum_probs=74.3
Q ss_pred CcHHHHHhhhhhHHHcCC--CEEEeCCCCCCC-C----CCCcccccCCCCCC-CCCCHHHHHHHHHHHHHCCCEEEEEEc
Q 014892 43 DWWRNLERKVPDISKSGF--TSVWLPPATHSF-A----PEGYLPQNLYSLNS-SYGSEHLLKALLHKMKQHKVRAMADIV 114 (416)
Q Consensus 43 G~~~gi~~~LdyLk~LGv--~~I~L~Pi~~~~-~----~~GY~~~d~~~id~-~~Gt~~d~~~Lv~~aH~~Gi~VilD~V 114 (416)
.+-+.+.+-++.+++-|| ++|||=.=+... . ..+|.. +..|+ +|- +.++||+++|++|+|||+-+.
T Consensus 22 ~s~~ev~~v~~~~r~~~iP~D~i~lD~dw~~~~~~~~~~~~~~~---ft~d~~~FP---dp~~mi~~Lh~~G~k~v~~v~ 95 (292)
T cd06595 22 YSDEEYLALMDRFKKHNIPLDVLVIDMDWHVTDIPSKYGSGWTG---YSWNRKLFP---DPEKLLQDLHDRGLKVTLNLH 95 (292)
T ss_pred CCHHHHHHHHHHHHHhCCCccEEEEecccccccccccccCCcce---eEEChhcCC---CHHHHHHHHHHCCCEEEEEeC
Confidence 367788888888887665 677763211110 0 012221 34443 554 568999999999999999886
Q ss_pred cccCcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEE
Q 014892 115 INHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFR 194 (416)
Q Consensus 115 ~NH~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfR 194 (416)
+.. +.+.. ...|..+... .... .. . ....-+|+.||+.++...+.++.-+.+.|||||=
T Consensus 96 P~~-~~~~~--~~~y~~~~~~-~~~~--------~~-----~----~~~~~~D~tnp~a~~~w~~~~~~~~~~~Gidg~W 154 (292)
T cd06595 96 PAD-GIRAH--EDQYPEMAKA-LGVD--------PA-----T----EGPILFDLTNPKFMDAYFDNVHRPLEKQGVDFWW 154 (292)
T ss_pred CCc-ccCCC--cHHHHHHHHh-cCCC--------cc-----c----CCeEEecCCCHHHHHHHHHHHHHHHHhcCCcEEE
Confidence 642 21110 0112111100 0000 00 0 0112468999999987766665444599999999
Q ss_pred ecccC
Q 014892 195 FDFAR 199 (416)
Q Consensus 195 lD~a~ 199 (416)
.|...
T Consensus 155 ~D~~E 159 (292)
T cd06595 155 LDWQQ 159 (292)
T ss_pred ecCCC
Confidence 99643
|
Alpha-xylosidases catalyze the release of an alpha-xylose residue from the non-reducing end of alpha-xyloside substrates. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. |
| >cd06589 GH31 The enzymes of glycosyl hydrolase family 31 (GH31) occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase | Back alignment and domain information |
|---|
Probab=92.24 E-value=1 Score=42.47 Aligned_cols=94 Identities=11% Similarity=0.187 Sum_probs=64.7
Q ss_pred CcHHHHHhhhhhHHHcC--CCEEEeCCCCCCCCCCCcccccC-CCCCC-CCCCHHHHHHHHHHHHHCCCEEEEEEccccC
Q 014892 43 DWWRNLERKVPDISKSG--FTSVWLPPATHSFAPEGYLPQNL-YSLNS-SYGSEHLLKALLHKMKQHKVRAMADIVINHR 118 (416)
Q Consensus 43 G~~~gi~~~LdyLk~LG--v~~I~L~Pi~~~~~~~GY~~~d~-~~id~-~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~ 118 (416)
.+-+.+.+.++.+++.| +++|+|-+-+... | .++ +..|+ +|.+ .++||+.+|++|++|++-+.
T Consensus 21 ~~~~~v~~~~~~~~~~~iP~d~~~lD~~~~~~----~--~~f~~~~d~~~Fpd---p~~~i~~l~~~g~~~~~~~~---- 87 (265)
T cd06589 21 GDQDKVLEVIDGMRENDIPLDGFVLDDDYTDG----Y--GDFTFDWDAGKFPN---PKSMIDELHDNGVKLVLWID---- 87 (265)
T ss_pred CCHHHHHHHHHHHHHcCCCccEEEECcccccC----C--ceeeeecChhhCCC---HHHHHHHHHHCCCEEEEEeC----
Confidence 47788889999888855 5688886544332 1 111 24442 5544 67899999999999999442
Q ss_pred cCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEeccc
Q 014892 119 VGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFA 198 (416)
Q Consensus 119 ~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a 198 (416)
|.|++...+.++..+.+.|||||=+|..
T Consensus 88 ----------------------------------------------------P~v~~w~~~~~~~~~~~~Gvdg~w~D~~ 115 (265)
T cd06589 88 ----------------------------------------------------PYIREWWAEVVKKLLVSLGVDGFWTDMG 115 (265)
T ss_pred ----------------------------------------------------hhHHHHHHHHHHHhhccCCCCEEeccCC
Confidence 2236666666666545899999999976
Q ss_pred CCC
Q 014892 199 RGY 201 (416)
Q Consensus 199 ~~~ 201 (416)
...
T Consensus 116 E~~ 118 (265)
T cd06589 116 EPS 118 (265)
T ss_pred CCC
Confidence 543
|
All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. In most cases, the pyranose moiety recognized in subsite -1 of the substrate binding site is an alpha-D-glucose, though some GH31 family members show a preference for alpha-D-xylose. Several GH31 enzymes can accommodate both glucose and xylose and different levels of discrimination between the two have been observed. Most characterized GH31 enzymes are alpha-glucosidases. In mammals, GH31 members with alpha-glucosidase activity are implicated in at least three distinct biological processes |
| >cd06545 GH18_3CO4_chitinase The Bacteroides thetaiotaomicron protein represented by pdb structure 3CO4 is an uncharacterized bacterial member of the family 18 glycosyl hydrolases with homologs found in Flavobacterium, Stigmatella, and Pseudomonas | Back alignment and domain information |
|---|
Probab=92.07 E-value=1.1 Score=41.87 Aligned_cols=81 Identities=9% Similarity=0.152 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHHHCCCEEEEEEccccCcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCH
Q 014892 92 EHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQH 171 (416)
Q Consensus 92 ~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~ 171 (416)
..++..++++||++|+||++=+- ++... . +. --..+|
T Consensus 45 ~~~~~~~~~~~~~~~~kvl~sig-g~~~~-----------------~---------------------~~----~~~~~~ 81 (253)
T cd06545 45 RSELNSVVNAAHAHNVKILISLA-GGSPP-----------------E---------------------FT----AALNDP 81 (253)
T ss_pred HHHHHHHHHHHHhCCCEEEEEEc-CCCCC-----------------c---------------------ch----hhhcCH
Confidence 46789999999999999998431 11000 0 00 023468
Q ss_pred HHHHHHHHHHHHHHHhcCCCeEEecccCCCc-----HHHHHHHHHhcCC
Q 014892 172 FVRKDIIAWLRWLRNTVGFQDFRFDFARGYS-----AKYVKEYIEGARP 215 (416)
Q Consensus 172 ~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~-----~~~~~~~~~~~~~ 215 (416)
+.|+.+++.+..+++++|.||+-+|--.... ..|++++++++++
T Consensus 82 ~~r~~fi~~lv~~~~~~~~DGIdiDwE~~~~~~~~~~~fv~~Lr~~l~~ 130 (253)
T cd06545 82 AKRKALVDKIINYVVSYNLDGIDVDLEGPDVTFGDYLVFIRALYAALKK 130 (253)
T ss_pred HHHHHHHHHHHHHHHHhCCCceeEEeeccCccHhHHHHHHHHHHHHHhh
Confidence 8899999999888899999999999643221 3577778777653
|
|
| >cd06568 GH20_SpHex_like A subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the N-acetylhexosaminidase from Streptomyces plicatus (SpHex) | Back alignment and domain information |
|---|
Probab=92.04 E-value=1.7 Score=42.46 Aligned_cols=125 Identities=10% Similarity=0.048 Sum_probs=70.5
Q ss_pred cHHHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCC------------CCCCCCHHHHHHHHHHHHHCCCEEEE
Q 014892 44 WWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSL------------NSSYGSEHLLKALLHKMKQHKVRAMA 111 (416)
Q Consensus 44 ~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~i------------d~~~Gt~~d~~~Lv~~aH~~Gi~Vil 111 (416)
..+-|.+.+|.++..++|.++|--.=.. .+......|=.+ ...+=|.+|+++||+-|.++||.||-
T Consensus 16 ~~~~lk~~id~ma~~KlN~lhlHLtD~~--~~rle~~~~P~lt~~ga~~~~~~~~~~~YT~~di~elv~yA~~rgI~vIP 93 (329)
T cd06568 16 TVAEVKRYIDLLALYKLNVLHLHLTDDQ--GWRIEIKSWPKLTEIGGSTEVGGGPGGYYTQEDYKDIVAYAAERHITVVP 93 (329)
T ss_pred CHHHHHHHHHHHHHhCCcEEEEEeecCC--cceeeecCcccccccccccccCCCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 4677888888999999999998432100 111111111111 01122799999999999999999997
Q ss_pred EE-ccccCcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhc
Q 014892 112 DI-VINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTV 188 (416)
Q Consensus 112 D~-V~NH~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~ 188 (416)
.+ ++-|+..-.. .|..+.. .. .......+.-.....||..+|++.+++.+++...++-+
T Consensus 94 EiD~PGH~~a~~~----~~p~l~~-----~~---------~~~~~~~~~~~~~~~l~~~~~~t~~fl~~v~~E~~~~f 153 (329)
T cd06568 94 EIDMPGHTNAALA----AYPELNC-----DG---------KAKPLYTGIEVGFSSLDVDKPTTYEFVDDVFRELAALT 153 (329)
T ss_pred ecCCcHHHHHHHH----hChhhcc-----CC---------CCCccccccCCCCcccCCCCHHHHHHHHHHHHHHHHhC
Confidence 76 2345443100 0100000 00 00000000001124589999999999999999887544
|
SpHex catalyzes the hydrolysis of N-acetyl-beta-hexosaminides. An Asp residue within the active site plays a critical role in substrate-assisted catalysis by orienting the 2-acetamido group and stabilizing the transition state. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. Proteins belonging to this subgroup lack the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. |
| >cd06601 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) are glycosyl hydrolase family 31 (GH31) enzymes that degrade alpha-1,4-glucans and maltooligosaccharides via a nonhydrolytic pathway to yield 1,5-D-anhydrofructose from the nonreducing end | Back alignment and domain information |
|---|
Probab=91.95 E-value=0.55 Score=45.82 Aligned_cols=109 Identities=12% Similarity=0.101 Sum_probs=71.4
Q ss_pred cHHHHHhhhhhHHHcCC--CEEEeCCCCCCCCCCCcccccCCCCC-CCCCCHHHHHHHHHHHHHCCCEEEEEEccccCcC
Q 014892 44 WWRNLERKVPDISKSGF--TSVWLPPATHSFAPEGYLPQNLYSLN-SSYGSEHLLKALLHKMKQHKVRAMADIVINHRVG 120 (416)
Q Consensus 44 ~~~gi~~~LdyLk~LGv--~~I~L~Pi~~~~~~~GY~~~d~~~id-~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~ 120 (416)
+-+.+.+-++.+++.+| ++|||=.=+. .+|. .+..| .+|-.+ ++||+++|++|++||+-+.+- +..
T Consensus 22 ~~~ev~~v~~~~r~~~IP~D~i~lDidy~----~~~~---~Ft~d~~~FPdp---~~mv~~L~~~G~klv~~i~P~-i~~ 90 (332)
T cd06601 22 NRSDLEEVVEGYRDNNIPLDGLHVDVDFQ----DNYR---TFTTNGGGFPNP---KEMFDNLHNKGLKCSTNITPV-ISY 90 (332)
T ss_pred CHHHHHHHHHHHHHcCCCCceEEEcCchh----cCCC---ceeecCCCCCCH---HHHHHHHHHCCCeEEEEecCc-eec
Confidence 56777777887777665 6777754322 1231 24445 366554 789999999999999876432 110
Q ss_pred CCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccC
Q 014892 121 TTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFAR 199 (416)
Q Consensus 121 ~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~ 199 (416)
. ..|.. -... +|+.||++|+.-.+..+.+. +.|||||=+|+..
T Consensus 91 g---------------~~~~~------------------~~~~--pDftnp~ar~wW~~~~~~l~-~~Gv~~~W~DmnE 133 (332)
T cd06601 91 G---------------GGLGS------------------PGLY--PDLGRPDVREWWGNQYKYLF-DIGLEFVWQDMTT 133 (332)
T ss_pred C---------------ccCCC------------------Ccee--eCCCCHHHHHHHHHHHHHHH-hCCCceeecCCCC
Confidence 0 00100 0112 46789999999888888776 7899999999754
|
GLases cleave the bond between C1 and O1 of the nonreducing sugar residue of alpha-glucans to generate a monosaccharide product with a double bond between C1 and C2. This family corresponds to subgroup 2 in the Ernst et al classification of GH31 enzymes. |
| >PLN02950 4-alpha-glucanotransferase | Back alignment and domain information |
|---|
Probab=91.86 E-value=0.5 Score=52.15 Aligned_cols=72 Identities=21% Similarity=0.201 Sum_probs=59.9
Q ss_pred ccCceeEEEeeecCCCC---CCcHHHHHhhhhhHHHcCCCEEEeCCCCCCCC------CCCcccccCCCCCCCCCCHHHH
Q 014892 25 RNGREILFQGFNWESCK---HDWWRNLERKVPDISKSGFTSVWLPPATHSFA------PEGYLPQNLYSLNSSYGSEHLL 95 (416)
Q Consensus 25 ~~~~~~~~q~f~~~~~~---~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~------~~GY~~~d~~~id~~~Gt~~d~ 95 (416)
+.+.|+++|+|-=.+.. =|||..+.+-+|.+++.|.+.|+|+|+.+... +..|.+.+-++++|-|=+.+++
T Consensus 259 ~R~~Gi~~~l~SLrS~~s~GIGDf~dl~~~id~~a~~G~~~~QilPl~~t~~~~~~~~SsPYs~~S~falNPlyI~l~~l 338 (909)
T PLN02950 259 WRGAGVAVPVFSIRSEEDVGVGEFLDLKLLVDWAVKSGLHLVQLLPVNDTSVHGMWWDSYPYSSLSVFALHPLYLRVQAL 338 (909)
T ss_pred ccceEEEEecccCCCCCCCCeeCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCCCCCCCcCcccccccChhhcCHHHH
Confidence 45679999999865443 28999999999999999999999999998652 2379999999999999887666
Q ss_pred H
Q 014892 96 K 96 (416)
Q Consensus 96 ~ 96 (416)
-
T Consensus 339 ~ 339 (909)
T PLN02950 339 S 339 (909)
T ss_pred H
Confidence 3
|
|
| >COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.78 E-value=0.36 Score=52.34 Aligned_cols=95 Identities=12% Similarity=-0.012 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHCCCEEEEEEccccCcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCC-CCCCcCCCCCHH
Q 014892 94 LLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNF-HGVPNIDHTQHF 172 (416)
Q Consensus 94 d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~dln~~~~~ 172 (416)
+.++||+.+|++|||+|+=+.+. ...+++.+. ... ....++..+++. ....+.+ ....-+||.||+
T Consensus 322 ~pk~mi~~l~~~Gikl~~~i~P~-i~~d~~~~~-----e~~-----~~Gy~~k~~~g~--~~~~~~w~~~~a~~DFtnp~ 388 (772)
T COG1501 322 DPKQMIAELHEKGIKLIVIINPY-IKQDSPLFK-----EAI-----EKGYFVKDPDGE--IYQADFWPGNSAFPDFTNPD 388 (772)
T ss_pred CHHHHHHHHHhcCceEEEEeccc-cccCCchHH-----HHH-----HCCeEEECCCCC--EeeecccCCcccccCCCCHH
Confidence 35699999999999999966554 333332110 000 000112222211 1112222 244558999999
Q ss_pred HHHHHHH-HHHHHHHhcCCCeEEecccCCCc
Q 014892 173 VRKDIIA-WLRWLRNTVGFQDFRFDFARGYS 202 (416)
Q Consensus 173 v~~~l~~-~~~~w~~~~gvDGfRlD~a~~~~ 202 (416)
+|+...+ ..+.++ ++|||||=.|.....+
T Consensus 389 ~r~Ww~~~~~~~l~-d~Gv~g~W~D~nEp~~ 418 (772)
T COG1501 389 AREWWASDKKKNLL-DLGVDGFWNDMNEPEP 418 (772)
T ss_pred HHHHHHHHHHhHHH-hcCccEEEccCCCCcc
Confidence 9999995 556676 9999999999865443
|
|
| >KOG1065 consensus Maltase glucoamylase and related hydrolases, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.76 E-value=1.8 Score=46.47 Aligned_cols=135 Identities=14% Similarity=0.165 Sum_probs=76.5
Q ss_pred CCcHHHHHhhhhhHHHcCCC--EEEeCCCCCCCCCCCcc--cccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEcccc
Q 014892 42 HDWWRNLERKVPDISKSGFT--SVWLPPATHSFAPEGYL--PQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINH 117 (416)
Q Consensus 42 ~G~~~gi~~~LdyLk~LGv~--~I~L~Pi~~~~~~~GY~--~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH 117 (416)
.+.+..+.+..+..+++||. .+|. +-=|. -.||.-=+..|++ ++.+++.+|++|+|+|+=+=++=
T Consensus 307 Y~nls~~~dvv~~~~~agiPld~~~~--------DiDyMd~ykDFTvd~~~fp~---~~~fv~~Lh~~G~kyvliidP~i 375 (805)
T KOG1065|consen 307 YKNLSVVRDVVENYRAAGIPLDVIVI--------DIDYMDGYKDFTVDKVWFPD---LKDFVDDLHARGFKYVLIIDPFI 375 (805)
T ss_pred cccHHHHHHHHHHHHHcCCCcceeee--------ehhhhhcccceeeccccCcc---hHHHHHHHHhCCCeEEEEeCCcc
Confidence 35788888888888888884 4442 11122 3443222345665 99999999999999986443221
Q ss_pred CcCCCCCCCCcccccCCCCCCCCCC-ceecCCCCCCCCCCCCCC-CCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEe
Q 014892 118 RVGTTQGHGGKYNRYDGIPLSWDEH-AVTSCTGGLGNGSTGDNF-HGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRF 195 (416)
Q Consensus 118 ~~~~~~~~~~~~~~f~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRl 195 (416)
... ..|..|+.. .... .+.. ..+... ..+..+ ....=+|+.||++.....+.++.+-++.++|||=+
T Consensus 376 s~~------~~y~~y~~g---~~~~v~I~~-~~g~~~-~lg~vwP~~~~fpDftnp~~~~Ww~~~~~~fh~~vp~dg~wi 444 (805)
T KOG1065|consen 376 STN------SSYGPYDRG---VAKDVLIKN-REGSPK-MLGEVWPGSTAFPDFTNPAVVEWWLDELKRFHDEVPFDGFWI 444 (805)
T ss_pred ccC------ccchhhhhh---hhhceeeec-ccCchh-hhcccCCCcccccccCCchHHHHHHHHHHhhcccCCccceEE
Confidence 111 112222110 0000 0000 011100 111111 12333678999999999998888878999999999
Q ss_pred ccc
Q 014892 196 DFA 198 (416)
Q Consensus 196 D~a 198 (416)
|+-
T Consensus 445 Dmn 447 (805)
T KOG1065|consen 445 DMN 447 (805)
T ss_pred ECC
Confidence 984
|
|
| >PRK11052 malQ 4-alpha-glucanotransferase; Provisional | Back alignment and domain information |
|---|
Probab=91.39 E-value=1.6 Score=46.88 Aligned_cols=43 Identities=19% Similarity=0.193 Sum_probs=36.6
Q ss_pred ceeEEEeeecCCCCC---CcHHHHHhhhhhHHHcCCCEEEeCCCCC
Q 014892 28 REILFQGFNWESCKH---DWWRNLERKVPDISKSGFTSVWLPPATH 70 (416)
Q Consensus 28 ~~~~~q~f~~~~~~~---G~~~gi~~~LdyLk~LGv~~I~L~Pi~~ 70 (416)
=|+++|+|-=.+..+ |||..+.+-++.+++.|.+.+.|+|+..
T Consensus 144 wGv~~qlySLrs~~~~GIGDfgdl~~l~d~~a~~G~~~~qlnPlha 189 (695)
T PRK11052 144 WGACVQLYTLRSEHNWGIGDFGDLKQMLEDVAKRGGDFIGLNPIHA 189 (695)
T ss_pred eEEEeccccCCCCCCCCeecHHHHHHHHHHHHHcCCCEEEECCCCc
Confidence 478999997554332 8999999999999999999999999994
|
|
| >PF02806 Alpha-amylase_C: Alpha amylase, C-terminal all-beta domain; InterPro: IPR006048 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=91.17 E-value=0.49 Score=36.84 Aligned_cols=42 Identities=10% Similarity=0.090 Sum_probs=30.9
Q ss_pred EecCCEEEEEEC----CEEEEEEcCCCC---------CCCCCCcEEeeeCCceEE
Q 014892 372 EAQSNLYSAIIG----DKVCMKIGDGSW---------CPAGKEWTLATSGHKYAV 413 (416)
Q Consensus 372 ~~~~~~~~~~R~----~~~lvvinn~~~---------~~~~~~~~~~ls~~~~~~ 413 (416)
..+++++||.|. +.++||+|++.. .|.++.|++++++....+
T Consensus 6 d~~~~v~af~R~~~~~~~~lvv~Nf~~~~~~~~~~~~~p~~g~y~~vlnsd~~~~ 60 (95)
T PF02806_consen 6 DNENNVIAFERKDKGDDRVLVVFNFSPEAVYEDYRIGVPEAGRYKEVLNSDDEEY 60 (95)
T ss_dssp EESSSEEEEEETTTETTEEEEEEESSSS-EEEEEEECSSSSEEEEETTTTTCEEE
T ss_pred cCCCCEEEEEEcCCCCCEEEEEEECCCcccceeEEeCCCCcceeeEEeCCCccEE
Confidence 446789999992 258999998664 244678999998866544
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Alpha-amylase is classified as family 13 of the glycosyl hydrolases and is present in archaea, bacteria, plants and animals. Alpha-amylase is an essential enzyme in alpha-glucan metabolism, acting to catalyse the hydrolysis of alpha-1,4-glucosidic bonds of glycogen, starch and related polysaccharides. Although all alpha-amylases possess the same catalytic function, they can vary with respect to sequence. In general, they are composed of three domains: a TIM barrel containing the active site residues and chloride ion-binding site (domain A), a long loop region inserted between the third beta strand and the alpha-helix of domain A that contains calcium-binding site(s) (domain B), and a C-terminal beta-sheet domain that appears to show some variability in sequence and length between amylases (domain C) []. Amylases have at least one conserved calcium-binding site, as calcium is essential for the stability of the enzyme. The chloride-binding functions to activate the enzyme, which acts by a two-step mechanism involving a catalytic nucleophile base (usually an Asp) and a catalytic proton donor (usually a Glu) that are responsible for the formation of the beta-linked glycosyl-enzyme intermediate. This entry represents the all-beta domain that is found in several alpha-amylases, usually at the C terminus, and which forms a Greek key beta-barrel fold in these enzymes []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 1TCM_A 1CXL_A 1PJ9_A 1OT2_A 2DIJ_A 1CGV_A 1CXK_A 1PEZ_A 1CGX_A 2CXG_A .... |
| >PLN02763 hydrolase, hydrolyzing O-glycosyl compounds | Back alignment and domain information |
|---|
Probab=90.33 E-value=0.84 Score=50.45 Aligned_cols=133 Identities=13% Similarity=0.138 Sum_probs=69.8
Q ss_pred cHHHHHhhhhhHHHcCC--CEEEeCCCCCCCCCCCcccccCCCCCC-CCCCHHHHHHHHHHHHHCCCEEEEEEccccCcC
Q 014892 44 WWRNLERKVPDISKSGF--TSVWLPPATHSFAPEGYLPQNLYSLNS-SYGSEHLLKALLHKMKQHKVRAMADIVINHRVG 120 (416)
Q Consensus 44 ~~~gi~~~LdyLk~LGv--~~I~L~Pi~~~~~~~GY~~~d~~~id~-~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~ 120 (416)
+-+.+.+-++.+++.|| ++|||--=+ -.||.. |..|+ +|- +.++||+++|++|+|+|.=+-+ ++..
T Consensus 199 sq~eV~eva~~fre~~IP~DvIwlDidY----m~g~~~---FTwD~~rFP---dP~~mv~~Lh~~G~kvv~iidP-gI~~ 267 (978)
T PLN02763 199 SAKRVAEIARTFREKKIPCDVVWMDIDY----MDGFRC---FTFDKERFP---DPKGLADDLHSIGFKAIWMLDP-GIKA 267 (978)
T ss_pred CHHHHHHHHHHHHHcCCCceEEEEehhh----hcCCCc---eeECcccCC---CHHHHHHHHHHCCCEEEEEEcC-CCcc
Confidence 34445555555555443 445543111 013332 34443 554 4589999999999999864422 2221
Q ss_pred CCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCC-CCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEeccc
Q 014892 121 TTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHG-VPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFA 198 (416)
Q Consensus 121 ~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a 198 (416)
++.|..+... -....+....++. +..+..|++ ..=+||.||++|+...+.++.++ +.|||||=+|+-
T Consensus 268 -----d~gY~~y~eg---~~~~~fvk~~~G~--~y~G~vWpG~~~fpDFTnP~ar~WW~~~~k~l~-d~GVDG~W~Dmn 335 (978)
T PLN02763 268 -----EEGYFVYDSG---CENDVWIQTADGK--PFVGEVWPGPCVFPDFTNKKTRSWWANLVKDFV-SNGVDGIWNDMN 335 (978)
T ss_pred -----CCCCHHHHhH---hhcCeeEECCCCC--eeEeeecCCCccccCCCCHHHHHHHHHHHHHHh-cCCCcEEEccCC
Confidence 1123222210 0000011111111 111112221 12258999999999999999887 799999999974
|
|
| >PF10438 Cyc-maltodext_C: Cyclo-malto-dextrinase C-terminal domain; InterPro: IPR019492 This domain is at the very C terminus of cyclo-malto-dextrinase proteins and consists of 8 beta strands, is largely globular and appears to help stabilise the active sites created by upstream domains, IPR015171 from INTERPRO, and IPR006047 from INTERPRO | Back alignment and domain information |
|---|
Probab=90.31 E-value=0.44 Score=35.90 Aligned_cols=43 Identities=12% Similarity=0.097 Sum_probs=24.0
Q ss_pred EEecCCEEEEEE---CCEEEEEEcCCCCC------------CCCCCcEEeeeCCceEE
Q 014892 371 LEAQSNLYSAII---GDKVCMKIGDGSWC------------PAGKEWTLATSGHKYAV 413 (416)
Q Consensus 371 ~~~~~~~~~~~R---~~~~lvvinn~~~~------------~~~~~~~~~ls~~~~~~ 413 (416)
....+++|+|.| ++.++|++|+++.. +.....++++||+.+.+
T Consensus 5 f~P~~gvYvYfR~~~~~tVmVilN~n~~~~~ldl~ry~E~l~~~~~~~diltg~~i~l 62 (78)
T PF10438_consen 5 FAPQDGVYVYFRYYDGKTVMVILNKNDKEQTLDLKRYAEVLGGFTSAKDILTGKTIDL 62 (78)
T ss_dssp ---BTTEEEEEEEESSEEEEEEEE-SSS-EEEEGGGGHHHHTT--EEEETTT--EEE-
T ss_pred ECccCCEEEEEEEcCCCEEEEEEcCCCCCeEEcHHHHHHhhCCCcceEECCCCCEEec
Confidence 345788999999 45677777775533 12346788888887763
|
Cyclo-malto-dextrinases hydrolyse cyclodextrans to maltose and glucose and catalyse trans-glycosylation of oligosaccharides to the C3-, C4- or C6-hydroxyl groups of various acceptor sugar molecules. ; PDB: 3EDK_B 3EDD_A 3EDJ_B 3EDE_A 1H3G_B 3EDF_B. |
| >cd06603 GH31_GANC_GANAB_alpha This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB) | Back alignment and domain information |
|---|
Probab=89.91 E-value=0.6 Score=45.75 Aligned_cols=136 Identities=10% Similarity=0.086 Sum_probs=78.3
Q ss_pred CcHHHHHhhhhhHHHcCC--CEEEeCCCCCCCCCCCcccccCCCCCC-CCCCHHHHHHHHHHHHHCCCEEEEEEccccCc
Q 014892 43 DWWRNLERKVPDISKSGF--TSVWLPPATHSFAPEGYLPQNLYSLNS-SYGSEHLLKALLHKMKQHKVRAMADIVINHRV 119 (416)
Q Consensus 43 G~~~gi~~~LdyLk~LGv--~~I~L~Pi~~~~~~~GY~~~d~~~id~-~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~ 119 (416)
.+-+.+.+.++.+++.|| ++|||=.=+. .+|. .+..|+ +|- +.+.||+++|++|+||++-+.+- +.
T Consensus 21 ~~~~ev~~~~~~~~~~~iP~d~i~lD~~~~----~~~~---~f~~d~~~FP---dp~~mi~~L~~~G~k~~~~~~P~-v~ 89 (339)
T cd06603 21 KDQEDVKEVDAGFDEHDIPYDVIWLDIEHT----DGKR---YFTWDKKKFP---DPEKMQEKLASKGRKLVTIVDPH-IK 89 (339)
T ss_pred CCHHHHHHHHHHHHHcCCCceEEEEChHHh----CCCC---ceEeCcccCC---CHHHHHHHHHHCCCEEEEEecCc-ee
Confidence 467788888888888775 6777753221 1222 144554 554 55889999999999999987643 22
Q ss_pred CCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCC-CCCcCCCCCHHHHHHHHHHHHHHHH--hcCCCeEEec
Q 014892 120 GTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFH-GVPNIDHTQHFVRKDIIAWLRWLRN--TVGFQDFRFD 196 (416)
Q Consensus 120 ~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~dln~~~~~v~~~l~~~~~~w~~--~~gvDGfRlD 196 (416)
.+. .+..|... ..........++ .+..+..+. ...-+|+.||++++...+.++.... ..|+|||=+|
T Consensus 90 ~~~-----~~~~y~e~---~~~g~~vk~~~g--~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~~~~~~~g~~g~w~D 159 (339)
T cd06603 90 RDD-----GYYVYKEA---KDKGYLVKNSDG--GDFEGWCWPGSSSWPDFLNPEVRDWWASLFSYDKYKGSTENLYIWND 159 (339)
T ss_pred cCC-----CCHHHHHH---HHCCeEEECCCC--CEEEEEECCCCcCCccCCChhHHHHHHHHHHHHhhcccCCCceEEec
Confidence 211 01111100 000000000111 001111111 1234889999999999999998874 3689999888
Q ss_pred ccC
Q 014892 197 FAR 199 (416)
Q Consensus 197 ~a~ 199 (416)
+..
T Consensus 160 ~~E 162 (339)
T cd06603 160 MNE 162 (339)
T ss_pred cCC
Confidence 653
|
Initially distinguished on the basis of differences in electrophoretic mobility in starch gel, GANC and GANAB have been shown to have other differences, including those of substrate specificity. GANC and GANAB are key enzymes in glycogen metabolism that hydrolyze terminal, non-reducing 1,4-linked alpha-D-glucose residues from glycogen in the endoplasmic reticulum. The GANC/GANAB family includes the alpha-glucosidase II (ModA) from Dictyostelium discoideum as well as the alpha-glucosidase II (GLS2, or ROT2 - Reversal of TOR2 lethality protein 2) from Saccharomyces cerevisiae. |
| >cd06564 GH20_DspB_LnbB-like Glycosyl hydrolase family 20 (GH20) catalytic domain of dispersin B (DspB), lacto-N-biosidase (LnbB) and related proteins | Back alignment and domain information |
|---|
Probab=89.63 E-value=2.3 Score=41.41 Aligned_cols=122 Identities=16% Similarity=0.120 Sum_probs=70.6
Q ss_pred cHHHHHhhhhhHHHcCCCEEEe--CC-----C--CCCCCCCC-cc------cccCCCC--CCCCCCHHHHHHHHHHHHHC
Q 014892 44 WWRNLERKVPDISKSGFTSVWL--PP-----A--THSFAPEG-YL------PQNLYSL--NSSYGSEHLLKALLHKMKQH 105 (416)
Q Consensus 44 ~~~gi~~~LdyLk~LGv~~I~L--~P-----i--~~~~~~~G-Y~------~~d~~~i--d~~~Gt~~d~~~Lv~~aH~~ 105 (416)
..+-|.+.|+.++.+++|.++| += + ++.....| |. +..+... ...+=|.+|+++||+-|.++
T Consensus 15 ~~~~ik~~id~ma~~K~N~lhlHltD~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~YT~~di~eiv~yA~~r 94 (326)
T cd06564 15 SMDFLKDIIKTMSWYKMNDLQLHLNDNLIFNLDDMSTTVNNATYASDDVKSGNNYYNLTANDGYYTKEEFKELIAYAKDR 94 (326)
T ss_pred CHHHHHHHHHHHHHcCCceEEEeecCCcccccCCCchhhhhhhhhccccccccccCCCCCCCCcccHHHHHHHHHHHHHc
Confidence 3677888889999999999998 11 1 11100000 10 0001111 12222799999999999999
Q ss_pred CCEEEEEE-ccccCcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHH
Q 014892 106 KVRAMADI-VINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWL 184 (416)
Q Consensus 106 Gi~VilD~-V~NH~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w 184 (416)
||.||-.+ +|-|+..-.. .| + ... +... ........||..+|++.+++.+++...
T Consensus 95 gI~vIPEID~PGH~~a~~~----~~-p------el~----~~~~---------~~~~~~~~l~~~~~~t~~f~~~l~~E~ 150 (326)
T cd06564 95 GVNIIPEIDSPGHSLAFTK----AM-P------ELG----LKNP---------FSKYDKDTLDISNPEAVKFVKALFDEY 150 (326)
T ss_pred CCeEeccCCCcHHHHHHHH----hh-H------Hhc----CCCc---------ccCCCcccccCCCHHHHHHHHHHHHHH
Confidence 99999766 3445543100 00 0 000 0000 001122347889999999999999988
Q ss_pred HHhcC
Q 014892 185 RNTVG 189 (416)
Q Consensus 185 ~~~~g 189 (416)
++-+.
T Consensus 151 ~~~f~ 155 (326)
T cd06564 151 LDGFN 155 (326)
T ss_pred HHhcC
Confidence 86665
|
Dispersin B is a soluble beta-N-acetylglucosamidase found in bacteria that hydrolyzes the beta-1,6-linkages of PGA (poly-beta-(1,6)-N-acetylglucosamine), a major component of the extracellular polysaccharide matrix. Lacto-N-biosidase hydrolyzes lacto-N-biose (LNB) type I oligosaccharides at the nonreducing terminus to produce lacto-N-biose as part of the GNB/LNB (galacto-N-biose/lacto-N-biose I) degradation pathway. The lacto-N-biosidase from Bifidobacterium bifidum has this GH20 domain, a carbohydrate binding module 32, and a bacterial immunoglobulin-like domain 2, as well as a YSIRK signal peptide and a G5 membrane anchor at the N and C termini, respectively. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. |
| >PLN03236 4-alpha-glucanotransferase; Provisional | Back alignment and domain information |
|---|
Probab=89.58 E-value=0.79 Score=49.19 Aligned_cols=72 Identities=19% Similarity=0.220 Sum_probs=59.1
Q ss_pred ccCceeEEEeeecCCCCC---CcHHHHHhhhhhHHHcCCCEEEeCCCCCCCC-----C-CCcccccCCCCCCCCCCHHHH
Q 014892 25 RNGREILFQGFNWESCKH---DWWRNLERKVPDISKSGFTSVWLPPATHSFA-----P-EGYLPQNLYSLNSSYGSEHLL 95 (416)
Q Consensus 25 ~~~~~~~~q~f~~~~~~~---G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~-----~-~GY~~~d~~~id~~~Gt~~d~ 95 (416)
+.+.|+++|+|-=.+..+ |||..+.+-+|.+++.|.+.|+|+|+.+... . ..|.+.+-++.+|-|=+.+.+
T Consensus 59 ~R~aGill~l~SLrS~~s~GIGDfgdL~~fvD~~a~~G~~~~QiLPL~~t~~~~~~~dSSPYsp~S~fAlNPlyIdle~L 138 (745)
T PLN03236 59 WKGSGMALPVFSLRSAESVGAGDFGDLEALVDFAAEAGMSVVQLLPVNDTCVHGTFWDSYPYSSLSVHALHPLYLKLKEL 138 (745)
T ss_pred hhhheeeeccccCCCCCCCCcccHHHHHHHHHHHHHcCCCEEEECCCCcCCCCCCCCCCCCcCcccccccChHHcCHHHh
Confidence 445799999998655433 8999999999999999999999999998752 2 489999999999888776655
Q ss_pred H
Q 014892 96 K 96 (416)
Q Consensus 96 ~ 96 (416)
.
T Consensus 139 ~ 139 (745)
T PLN03236 139 V 139 (745)
T ss_pred h
Confidence 3
|
|
| >cd06569 GH20_Sm-chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin | Back alignment and domain information |
|---|
Probab=89.55 E-value=0.96 Score=46.03 Aligned_cols=77 Identities=12% Similarity=0.054 Sum_probs=50.8
Q ss_pred cHHHHHhhhhhHHHcCCCEEEeC-------CC----C----CCCCCCCcccccCCCCCCCCC-------------CHHHH
Q 014892 44 WWRNLERKVPDISKSGFTSVWLP-------PA----T----HSFAPEGYLPQNLYSLNSSYG-------------SEHLL 95 (416)
Q Consensus 44 ~~~gi~~~LdyLk~LGv~~I~L~-------Pi----~----~~~~~~GY~~~d~~~id~~~G-------------t~~d~ 95 (416)
..+-|.+.+|.++..++|.++|- |+ + +..++.++...+...+-|.+| |.+|+
T Consensus 20 ~~~~ik~~Id~ma~~K~N~lHlHLtDdqgwriei~~~P~Lt~~ga~r~~~~~~~~~~~~~~~~~~~~~~~~~g~YT~~di 99 (445)
T cd06569 20 SKETVLKLLDQMAAYKLNKLHLHLTDDEGWRLEIPGLPELTEVGAKRCHDLSETTCLLPQLGSGPDTNNSGSGYYSRADY 99 (445)
T ss_pred CHHHHHHHHHHHHHhCCceEEEEeecCCCcceeccCCchhhhcccccccccccccccccccccCcccCcccCCccCHHHH
Confidence 47778888888888889988873 11 1 111233443333222322222 78999
Q ss_pred HHHHHHHHHCCCEEEEEE-ccccCcC
Q 014892 96 KALLHKMKQHKVRAMADI-VINHRVG 120 (416)
Q Consensus 96 ~~Lv~~aH~~Gi~VilD~-V~NH~~~ 120 (416)
++||+-|++|||.||-.+ ++.|+..
T Consensus 100 ~eiv~yA~~rgI~VIPEID~PGH~~a 125 (445)
T cd06569 100 IEILKYAKARHIEVIPEIDMPGHARA 125 (445)
T ss_pred HHHHHHHHHcCCEEEEccCCchhHHH
Confidence 999999999999999776 4566654
|
Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. |
| >PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=89.42 E-value=0.68 Score=46.02 Aligned_cols=122 Identities=13% Similarity=0.132 Sum_probs=67.8
Q ss_pred HHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCC--CHHHHHHHHHHHHHCCCEEEEEEccccCcCCCC
Q 014892 46 RNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYG--SEHLLKALLHKMKQHKVRAMADIVINHRVGTTQ 123 (416)
Q Consensus 46 ~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~G--t~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~ 123 (416)
+-+.+.+.-+|++|||+|-|..+. +-.++|.=| .-+.|.++|+.|+++||+|||-+.. +.. |
T Consensus 10 e~~~~d~~~m~~~G~n~vri~~~~------------W~~lEP~eG~ydF~~lD~~l~~a~~~Gi~viL~~~~-~~~---P 73 (374)
T PF02449_consen 10 EEWEEDLRLMKEAGFNTVRIGEFS------------WSWLEPEEGQYDFSWLDRVLDLAAKHGIKVILGTPT-AAP---P 73 (374)
T ss_dssp CHHHHHHHHHHHHT-SEEEE-CCE------------HHHH-SBTTB---HHHHHHHHHHHCTT-EEEEEECT-TTS----
T ss_pred HHHHHHHHHHHHcCCCEEEEEEec------------hhhccCCCCeeecHHHHHHHHHHHhccCeEEEEecc-ccc---c
Confidence 456788899999999999987753 112222222 2345999999999999999997651 111 1
Q ss_pred CCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcC----CCeEEeccc
Q 014892 124 GHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVG----FQDFRFDFA 198 (416)
Q Consensus 124 ~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~g----vDGfRlD~a 198 (416)
.|+... ++.......++.. .....-...++.+|.+|+++.+.++..++.++ |-|+-+|.=
T Consensus 74 ------~Wl~~~----~Pe~~~~~~~g~~-----~~~g~~~~~~~~~p~yr~~~~~~~~~l~~~y~~~p~vi~~~i~NE 137 (374)
T PF02449_consen 74 ------AWLYDK----YPEILPVDADGRR-----RGFGSRQHYCPNSPAYREYARRFIRALAERYGDHPAVIGWQIDNE 137 (374)
T ss_dssp ------HHHHCC----SGCCC-B-TTTSB-----EECCCSTT-HCCHHHHHHHHHHHHHHHHHHHTTTTTEEEEEECCS
T ss_pred ------cchhhh----cccccccCCCCCc-----CccCCccccchhHHHHHHHHHHHHHHHHhhccccceEEEEEeccc
Confidence 111100 0000000001110 01122234577899999998888877665554 668888864
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This group of beta-galactosidase enzymes (3.2.1.23 from EC) belong to the glycosyl hydrolase 42 family GH42 from CAZY. The enzyme catalyses the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues.; GO: 0004565 beta-galactosidase activity, 0005975 carbohydrate metabolic process, 0009341 beta-galactosidase complex; PDB: 1KWK_A 1KWG_A 3U7V_A. |
| >PRK11052 malQ 4-alpha-glucanotransferase; Provisional | Back alignment and domain information |
|---|
Probab=89.26 E-value=0.95 Score=48.54 Aligned_cols=56 Identities=18% Similarity=0.210 Sum_probs=37.6
Q ss_pred CcHHHHHhhhhhHH--HcCCCEEE-eCCCCCCCCCCCcccccCCCCCCCCCCHHHHHHHH
Q 014892 43 DWWRNLERKVPDIS--KSGFTSVW-LPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALL 99 (416)
Q Consensus 43 G~~~gi~~~LdyLk--~LGv~~I~-L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv 99 (416)
|++..+++.+.... -+|++=|. +.|.-+. ....|.+.+-+.+||-|=+.+++.++.
T Consensus 165 gdl~~l~d~~a~~G~~~~qlnPlha~~p~~p~-~~SPYsp~Sr~alNPlyI~~e~l~e~~ 223 (695)
T PRK11052 165 GDLKQMLEDVAKRGGDFIGLNPIHALYPANPE-SASPYSPSSRRWLNVIYIDVNAVEDFQ 223 (695)
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCcCCCCCCC-CCCCcccccccccChHHcCHHHHhhhh
Confidence 46777777776322 34466666 4454333 467899999999998888877666553
|
|
| >cd02871 GH18_chitinase_D-like GH18 domain of Chitinase D (ChiD) | Back alignment and domain information |
|---|
Probab=89.11 E-value=2 Score=41.55 Aligned_cols=63 Identities=16% Similarity=0.252 Sum_probs=47.8
Q ss_pred CCHHHHHHHHHHHHHCCCEEEEEEccccCcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCC
Q 014892 90 GSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHT 169 (416)
Q Consensus 90 Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~ 169 (416)
.+.+++++-|+.||++|+|||+=+ +. |... ....
T Consensus 57 ~~~~~~~~~i~~~q~~G~KVllSi-----GG------------------~~~~-----------------------~~~~ 90 (312)
T cd02871 57 YSPAEFKADIKALQAKGKKVLISI-----GG------------------ANGH-----------------------VDLN 90 (312)
T ss_pred CChHHHHHHHHHHHHCCCEEEEEE-----eC------------------CCCc-----------------------cccC
Confidence 356889999999999999999864 11 0000 0124
Q ss_pred CHHHHHHHHHHHHHHHHhcCCCeEEeccc
Q 014892 170 QHFVRKDIIAWLRWLRNTVGFQDFRFDFA 198 (416)
Q Consensus 170 ~~~v~~~l~~~~~~w~~~~gvDGfRlD~a 198 (416)
+++-|+.+++.+..+++++|+||+=+|-=
T Consensus 91 ~~~~~~~fa~sl~~~~~~~g~DGiDiD~E 119 (312)
T cd02871 91 HTAQEDNFVDSIVAIIKEYGFDGLDIDLE 119 (312)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCeEEEecc
Confidence 56778889999998999999999999964
|
ChiD, a chitinase found in Bacillus circulans, hydrolyzes the 1,4-beta-linkages of N-acetylglucosamine in chitin and chitodextrins. The domain architecture of ChiD includes a catalytic glycosyl hydrolase family 18 (GH18) domain, a chitin-binding domain, and a fibronectin type III domain. The chitin-binding and fibronectin type III domains are located either N-terminal or C-terminal to the catalytic domain. This family includes exochitinase Chi36 from Bacillus cereus. |
| >COG1640 MalQ 4-alpha-glucanotransferase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=89.03 E-value=5 Score=41.33 Aligned_cols=46 Identities=11% Similarity=-0.041 Sum_probs=34.0
Q ss_pred cCceeEEEeeecCCCCC---CcHHHHHhhhhhHH-HcCCCEEEeCCCCCC
Q 014892 26 NGREILFQGFNWESCKH---DWWRNLERKVPDIS-KSGFTSVWLPPATHS 71 (416)
Q Consensus 26 ~~~~~~~q~f~~~~~~~---G~~~gi~~~LdyLk-~LGv~~I~L~Pi~~~ 71 (416)
+..++-+|.+.-.+++. |||..+.-++.-.. .-|.+.+.|+|++..
T Consensus 12 ~~~g~~v~L~~~~~~~~~GIGDfgdla~~~~d~~~~~g~~~~qi~Plh~~ 61 (520)
T COG1640 12 MKWGSGVQLYSLRLPGSWGIGDFGDLAYLFVDFLARHGQDYWQILPLHAT 61 (520)
T ss_pred ccccceeEEeeeccCCCCCccchhhHHHHHHHHHHHccCCeEEeccCCcc
Confidence 34456666666555544 89988888876655 999999999998854
|
|
| >TIGR01370 cysRS possible cysteinyl-tRNA synthetase, Methanococcus type | Back alignment and domain information |
|---|
Probab=86.91 E-value=3.7 Score=39.70 Aligned_cols=40 Identities=13% Similarity=0.191 Sum_probs=32.8
Q ss_pred CCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCC
Q 014892 160 FHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARG 200 (416)
Q Consensus 160 ~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~ 200 (416)
|++-..+++.+|+.++.|.+-+...+ +.|+|||=+|.+..
T Consensus 132 W~g~~~vd~~~~~W~~il~~rl~~l~-~kGfDGvfLD~lDs 171 (315)
T TIGR01370 132 WPGNYDVKYWDPEWKAIAFSYLDRVI-AQGFDGVYLDLIDA 171 (315)
T ss_pred CCCceeEecccHHHHHHHHHHHHHHH-HcCCCeEeeccchh
Confidence 44445688999999999999888776 99999999998754
|
Assignment of this protein family as cysteinyl-tRNA synthetase is controversial, supported by PubMed:11333988 but challenged by PubMed:14679218. Members of this family from Deinococcus radiodurans (bacterial) and Methanococcus jannaschii (archaeal), species lacking a conventional cysteinyl-tRNA synthetase (Cys--tRNA ligase), have been indicated to be a novel form of that enzyme, perhaps distantly related to class I tRNA ligases. The member from Thermotoga maritima is presumed to be a second isozyme of cysteinyl-tRNA synthetase. A number of homologous but more distantly related proteins are annotated as alpha-1,4 polygalactosaminidases. |
| >cd06546 GH18_CTS3_chitinase GH18 domain of CTS3 (chitinase 3), an uncharacterized protein from the human fungal pathogen Coccidioides posadasii | Back alignment and domain information |
|---|
Probab=86.16 E-value=9.7 Score=35.68 Aligned_cols=46 Identities=13% Similarity=0.130 Sum_probs=32.3
Q ss_pred CHHHHHHHHHHHHHHHHhcCCCeEEecccCCCc----HHHHHHHHHhcCC
Q 014892 170 QHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYS----AKYVKEYIEGARP 215 (416)
Q Consensus 170 ~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~----~~~~~~~~~~~~~ 215 (416)
+++-|+.+++.+.-+++++|+||+=+|--.... ..++++++++..+
T Consensus 93 ~~~~r~~f~~s~~~~~~~~~~DGiDiDwE~p~~~~~~~~ll~~Lr~~~~~ 142 (256)
T cd06546 93 DDEDFERYYGQLRDMIRRRGLDGLDLDVEEPMSLDGIIRLIDRLRSDFGP 142 (256)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCceEEeeecCCCHhHHHHHHHHHHHHhCC
Confidence 456677777777778889999999999754333 3456666666543
|
CTS3 has a chitinase-like glycosyl hydrolase family 18 (GH18) domain; and has homologs in bacteria as well as fungi. |
| >PRK14510 putative bifunctional 4-alpha-glucanotransferase/glycogen debranching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=85.68 E-value=1.4 Score=50.43 Aligned_cols=68 Identities=18% Similarity=0.080 Sum_probs=55.0
Q ss_pred CceeEEEeeecCCCC---CCcHHHHHhhhhhHHHcCCCEEEeCCCCCCC-C----CCCcccccCCCCCCCCCCHHH
Q 014892 27 GREILFQGFNWESCK---HDWWRNLERKVPDISKSGFTSVWLPPATHSF-A----PEGYLPQNLYSLNSSYGSEHL 94 (416)
Q Consensus 27 ~~~~~~q~f~~~~~~---~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~-~----~~GY~~~d~~~id~~~Gt~~d 94 (416)
.-|+++|+|-=.+.+ =|||..+.+-++.+++.|.+.|.|+|+.+.. . +..|.+.+-+..+|-|=+.+.
T Consensus 724 ~~Gv~~~l~sLrs~~~~GiGDf~dl~~~vd~~a~~G~~~~qilPl~~~~~~~p~~~SPYsp~S~~alNplyI~~~~ 799 (1221)
T PRK14510 724 ACGILMHLYSLRSQRPWGIGDFEELYALVDFLAEGGQSLWGVNPLHPLGLGDPERASPYQPSSRRAGNPLLISLDL 799 (1221)
T ss_pred ceEEEEccccCCCCCCCCccCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCCCCCCccchhccccChhhcCHhh
Confidence 568899999755422 2899999999999999999999999999754 2 378999988888877766543
|
|
| >cd06563 GH20_chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin | Back alignment and domain information |
|---|
Probab=85.54 E-value=7.3 Score=38.45 Aligned_cols=126 Identities=6% Similarity=-0.066 Sum_probs=68.8
Q ss_pred HHHHHhhhhhHHHcCCCEEEeCC-----------CCCC----CCCCCcccc----cCCCCCC--CCCCHHHHHHHHHHHH
Q 014892 45 WRNLERKVPDISKSGFTSVWLPP-----------ATHS----FAPEGYLPQ----NLYSLNS--SYGSEHLLKALLHKMK 103 (416)
Q Consensus 45 ~~gi~~~LdyLk~LGv~~I~L~P-----------i~~~----~~~~GY~~~----d~~~id~--~~Gt~~d~~~Lv~~aH 103 (416)
.+-|.+.+|.++.+++|.++|-- -++. .++.+.... ......+ .+=|.+|+++||+-|.
T Consensus 17 ~~~ik~~Id~ma~~K~N~lhlHltDdq~~rle~~~~P~Lt~~ga~~~~~~~~~~~~~~~~~~~~~~YT~~di~eiv~yA~ 96 (357)
T cd06563 17 VDEVKRFIDLMALYKLNVFHWHLTDDQGWRIEIKKYPKLTEVGAWRGPTEIGLPQGGGDGTPYGGFYTQEEIREIVAYAA 96 (357)
T ss_pred HHHHHHHHHHHHHhccceEEEeeecCCCceecccCcchhhhcccccCcccccccccccCCCccCceECHHHHHHHHHHHH
Confidence 56777788888889999999831 1111 111111111 1111111 1226899999999999
Q ss_pred HCCCEEEEEE-ccccCcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHH
Q 014892 104 QHKVRAMADI-VINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLR 182 (416)
Q Consensus 104 ~~Gi~VilD~-V~NH~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~ 182 (416)
++||+||-.+ ++.|+..-.. .|..+. ..+ .... +.. ........||..+|++.+++.+++.
T Consensus 97 ~rgI~VIPEID~PGH~~a~l~----~~pel~-------~~~----~~~~--~~~-~~~~~~~~L~~~~~~t~~f~~~ll~ 158 (357)
T cd06563 97 ERGITVIPEIDMPGHALAALA----AYPELG-------CTG----GPGS--VVS-VQGVVSNVLCPGKPETYTFLEDVLD 158 (357)
T ss_pred HcCCEEEEecCCchhHHHHHH----hCcccc-------CCC----CCCc--ccc-ccCcCCCccCCCChhHHHHHHHHHH
Confidence 9999999776 3445543100 000000 000 0000 000 0011122488899999999999998
Q ss_pred HHHHhc
Q 014892 183 WLRNTV 188 (416)
Q Consensus 183 ~w~~~~ 188 (416)
..++-+
T Consensus 159 E~~~lF 164 (357)
T cd06563 159 EVAELF 164 (357)
T ss_pred HHHHhC
Confidence 887433
|
Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This GH20 domain family includes an N-acetylglucosamidase (GlcNAcase A) from Pseudoalteromonas piscicida and an N-acetylhexosaminidase (SpHex) from Streptomyces plicatus. SpHex lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. |
| >PF14883 GHL13: Hypothetical glycosyl hydrolase family 13 | Back alignment and domain information |
|---|
Probab=84.92 E-value=16 Score=34.66 Aligned_cols=124 Identities=16% Similarity=0.104 Sum_probs=73.3
Q ss_pred HHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCHHHHHHHHH-HHH-HCCCEEEEEEccccCcCCCC
Q 014892 46 RNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLH-KMK-QHKVRAMADIVINHRVGTTQ 123 (416)
Q Consensus 46 ~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~-~aH-~~Gi~VilD~V~NH~~~~~~ 123 (416)
+.+-.-++.|++||+|+|+|-++....++.-.+.. |=.+.++--.+|+-.=|. +++ +.|++|..=+-. .+-+-|
T Consensus 17 ~nl~~l~~ri~~~~~~tV~Lqaf~d~~gdg~~~~~--YFpnr~lpvraDlf~rvawql~tr~~v~VyAWMPv--laf~lp 92 (294)
T PF14883_consen 17 RNLDKLIQRIKDMGINTVYLQAFADPDGDGNADAV--YFPNRHLPVRADLFNRVAWQLRTRAGVKVYAWMPV--LAFDLP 92 (294)
T ss_pred HHHHHHHHHHHHcCCCEEEEEeeeCCCCCCceeeE--EcCCCCCchHHHHHHHHHHHHhhhhCCEEEEeeeh--hhccCC
Confidence 34556678899999999999988766543333332 334555555666544433 554 889999864433 111111
Q ss_pred CCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEe
Q 014892 124 GHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRF 195 (416)
Q Consensus 124 ~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRl 195 (416)
.. ..+.... .. ...-....-|.--+|++|+.|.++-.-+.....+||+=|
T Consensus 93 ~~-----------~~~~~~~---~~--------~~~~~~y~RLSPf~p~~r~~I~~IYeDLA~y~~fdGILF 142 (294)
T PF14883_consen 93 KV-----------KRADEVR---TD--------RPDPDGYRRLSPFDPEARQIIKEIYEDLARYSKFDGILF 142 (294)
T ss_pred Cc-----------chhhhcc---cc--------CCCCCCceecCCCCHHHHHHHHHHHHHHHhhCCCCeEEE
Confidence 00 0000000 00 001122334666789999999999999985569999877
|
|
| >PF03198 Glyco_hydro_72: Glucanosyltransferase; InterPro: IPR004886 This family is a group of yeast glycolipid proteins anchored to the membrane | Back alignment and domain information |
|---|
Probab=84.85 E-value=1.3 Score=42.35 Aligned_cols=56 Identities=13% Similarity=0.203 Sum_probs=34.8
Q ss_pred cHHHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccccCcC
Q 014892 44 WWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVG 120 (416)
Q Consensus 44 ~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~ 120 (416)
|-+.-..-+++||+||+|+|-+ |+|||..-- .+.++++.+.||.||+|+-..+.+-
T Consensus 51 d~~~C~rDi~~l~~LgiNtIRV-----------------Y~vdp~~nH----d~CM~~~~~aGIYvi~Dl~~p~~sI 106 (314)
T PF03198_consen 51 DPEACKRDIPLLKELGINTIRV-----------------YSVDPSKNH----DECMSAFADAGIYVILDLNTPNGSI 106 (314)
T ss_dssp -HHHHHHHHHHHHHHT-SEEEE-----------------S---TTS------HHHHHHHHHTT-EEEEES-BTTBS-
T ss_pred CHHHHHHhHHHHHHcCCCEEEE-----------------EEeCCCCCH----HHHHHHHHhCCCEEEEecCCCCccc
Confidence 4455666689999999999984 778876543 3444567778999999997775555
|
It includes Candida albicans (Yeast) pH-regulated protein, which is required for apical growth and plays a role in morphogenesis and Saccharomyces cerevisiae glycolipid anchored surface protein.; PDB: 2W61_A 2W62_A 2W63_A. |
| >PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A | Back alignment and domain information |
|---|
Probab=84.82 E-value=1.7 Score=35.34 Aligned_cols=43 Identities=19% Similarity=0.394 Sum_probs=32.4
Q ss_pred HHHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
Q 014892 45 WRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMA 111 (416)
Q Consensus 45 ~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~Vil 111 (416)
=+-+.+-++.+.++|+.++|+.|= +.-+++++.|+++||+|+-
T Consensus 65 ~~~~~~~v~~~~~~g~~~v~~~~g------------------------~~~~~~~~~a~~~gi~vig 107 (116)
T PF13380_consen 65 PDKVPEIVDEAAALGVKAVWLQPG------------------------AESEELIEAAREAGIRVIG 107 (116)
T ss_dssp HHHHHHHHHHHHHHT-SEEEE-TT------------------------S--HHHHHHHHHTT-EEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEEcc------------------------hHHHHHHHHHHHcCCEEEe
Confidence 456788899999999999999984 5567888999999999984
|
|
| >cd02874 GH18_CFLE_spore_hydrolase Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination | Back alignment and domain information |
|---|
Probab=84.77 E-value=6.3 Score=38.00 Aligned_cols=46 Identities=15% Similarity=0.299 Sum_probs=35.8
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCc------HHHHHHHHHhcC
Q 014892 169 TQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYS------AKYVKEYIEGAR 214 (416)
Q Consensus 169 ~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~------~~~~~~~~~~~~ 214 (416)
.+|+.|+.+++.+..+++++|.||+-+|--..-+ ..|+++++.+++
T Consensus 83 ~~~~~r~~fi~~iv~~l~~~~~DGidiDwE~~~~~d~~~~~~fl~~lr~~l~ 134 (313)
T cd02874 83 SNPEARQRLINNILALAKKYGYDGVNIDFENVPPEDREAYTQFLRELSDRLH 134 (313)
T ss_pred cCHHHHHHHHHHHHHHHHHhCCCcEEEecccCCHHHHHHHHHHHHHHHHHhh
Confidence 4688899999999888889999999999754322 247777777765
|
CFLE is expressed as an inactive preprotein (called SleB) in the forespore compartment of sporulating cells. SleB translocates across the forespore inner membrane and is deposited as a mature enzyme in the cortex layer of the spore. As part of a sensory mechanism capable of initiating germination, CFLE degrades a spore-specific peptidoglycan constituent called muramic-acid delta-lactam that comprises the outer cortex. CFLE has a C-terminal glycosyl hydrolase family 18 (GH18) catalytic domain as well as two N-terminal LysM peptidoglycan-binding domains. In addition to SleB, this family includes YaaH, YdhD, and YvbX from Bacillus subtilis. |
| >cd06565 GH20_GcnA-like Glycosyl hydrolase family 20 (GH20) catalytic domain of N-acetyl-beta-D-glucosaminidase (GcnA, also known as BhsA) and related proteins | Back alignment and domain information |
|---|
Probab=84.48 E-value=3.4 Score=39.76 Aligned_cols=112 Identities=6% Similarity=-0.060 Sum_probs=68.5
Q ss_pred cHHHHHhhhhhHHHcCCCEEEeCC--CCCCCCCCCcccccCCCCC--CCCCCHHHHHHHHHHHHHCCCEEEEEE-ccccC
Q 014892 44 WWRNLERKVPDISKSGFTSVWLPP--ATHSFAPEGYLPQNLYSLN--SSYGSEHLLKALLHKMKQHKVRAMADI-VINHR 118 (416)
Q Consensus 44 ~~~gi~~~LdyLk~LGv~~I~L~P--i~~~~~~~GY~~~d~~~id--~~~Gt~~d~~~Lv~~aH~~Gi~VilD~-V~NH~ 118 (416)
..+-|.+.++.++.+|+|.++|-= -|+..+ + -.+. ...=|.+|+++|++-|.++||.||-.+ +|-|+
T Consensus 15 ~~~~lk~~id~ma~~k~N~l~lhl~D~f~~~~---~-----p~~~~~~~~yT~~ei~ei~~yA~~~gI~vIPeid~pGH~ 86 (301)
T cd06565 15 KVSYLKKLLRLLALLGANGLLLYYEDTFPYEG---E-----PEVGRMRGAYTKEEIREIDDYAAELGIEVIPLIQTLGHL 86 (301)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEEecceecCC---C-----cccccCCCCcCHHHHHHHHHHHHHcCCEEEecCCCHHHH
Confidence 467788889999999999999821 111111 1 1111 122279999999999999999999644 24455
Q ss_pred cCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcC
Q 014892 119 VGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVG 189 (416)
Q Consensus 119 ~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~g 189 (416)
..--.+ ..|... +... ..-..||..+|++.+.+.+.+...++-+.
T Consensus 87 ~~~l~~--~~~~~l------------~~~~------------~~~~~l~~~~~~t~~fi~~li~ev~~~f~ 131 (301)
T cd06565 87 EFILKH--PEFRHL------------REVD------------DPPQTLCPGEPKTYDFIEEMIRQVLELHP 131 (301)
T ss_pred HHHHhC--cccccc------------cccC------------CCCCccCCCChhHHHHHHHHHHHHHHhCC
Confidence 431100 001000 0000 00123788899999999999988885444
|
GcnA is an exoglucosidase which cleaves N-acetyl-beta-D-galactosamine (NAG) and N-acetyl-beta-D-galactosamine residues from 4-methylumbelliferylated (4MU) substrates, as well as cleaving NAG from chito-oligosaccharides (i.e. NAG polymers). In contrast, sulfated forms of the substrate are unable to be cleaved and act instead as mild competitive inhibitors. Additionally, the enzyme is known to be poisoned by several first-row transition metals as well as by mercury. GcnA forms a homodimer with subunits comprised of three domains, an N-terminal zincin-like domain, this central catalytic GH20 domain, and a C-terminal alpha helical domain. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. |
| >TIGR03849 arch_ComA phosphosulfolactate synthase | Back alignment and domain information |
|---|
Probab=84.26 E-value=3.1 Score=38.35 Aligned_cols=46 Identities=15% Similarity=0.273 Sum_probs=36.1
Q ss_pred hhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Q 014892 50 RKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADI 113 (416)
Q Consensus 50 ~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~ 113 (416)
+-+.+.|+|||++|+++- |. ..+ +.++..+||+.++++|++|+-.+
T Consensus 75 ~Yl~~~k~lGf~~IEiS~--------G~-----~~i-----~~~~~~rlI~~~~~~g~~v~~Ev 120 (237)
T TIGR03849 75 EYLNECDELGFEAVEISD--------GS-----MEI-----SLEERCNLIERAKDNGFMVLSEV 120 (237)
T ss_pred HHHHHHHHcCCCEEEEcC--------Cc-----cCC-----CHHHHHHHHHHHHhCCCeEeccc
Confidence 345599999999999874 21 122 37899999999999999999654
|
This model finds the ComA (Coenzyme M biosynthesis A) protein, phosphosulfolactate synthase, in methanogenic archaea. The ComABC pathway is one of at least two pathways to the intermediate sulfopyruvate. Coenzyme M occurs rarely and sporadically outside of the archaea, as for expoxide metabolism in Xanthobacter autotrophicus Py2, but candidate phosphosulfolactate synthases from that and other species occur fall below the cutoff and outside the scope of this model. This model deliberately is narrower in scope than pfam02679. |
| >PF01301 Glyco_hydro_35: Glycosyl hydrolases family 35; InterPro: IPR001944 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=84.09 E-value=0.84 Score=44.33 Aligned_cols=55 Identities=9% Similarity=0.079 Sum_probs=33.2
Q ss_pred hhhhhHHHcCCCEEEeCCCCC-CCCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Q 014892 50 RKVPDISKSGFTSVWLPPATH-SFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADI 113 (416)
Q Consensus 50 ~~LdyLk~LGv~~I~L~Pi~~-~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~ 113 (416)
+.|..+|++|+|+|..-=.+. +...- ...|| ....|+.+|++.|+++||.|||-.
T Consensus 28 ~~l~k~ka~G~n~v~~yv~W~~he~~~--g~~df-------~g~~dl~~f~~~a~~~gl~vilrp 83 (319)
T PF01301_consen 28 DRLQKMKAAGLNTVSTYVPWNLHEPEE--GQFDF-------TGNRDLDRFLDLAQENGLYVILRP 83 (319)
T ss_dssp HHHHHHHHTT-SEEEEE--HHHHSSBT--TB----------SGGG-HHHHHHHHHHTT-EEEEEE
T ss_pred HHHHHHHhCCcceEEEeccccccCCCC--Ccccc-------cchhhHHHHHHHHHHcCcEEEecc
Confidence 567778999999998742221 11001 12222 234789999999999999999964
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 35 GH35 from CAZY comprises enzymes with only one known activity; beta-galactosidase (3.2.1.23 from EC). Mammalian beta-galactosidase is a lysosomal enzyme (gene GLB1) which cleaves the terminal galactose from gangliosides, glycoproteins, and glycosaminoglycans and whose deficiency is the cause of the genetic disease Gm(1) gangliosidosis (Morquio disease type B).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3OGS_A 3OGV_A 3OGR_A 3OG2_A 1TG7_A 1XC6_A 3THC_C 3THD_D 3D3A_A 4E8D_B .... |
| >PF10566 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: IPR019563 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=83.95 E-value=13 Score=35.15 Aligned_cols=61 Identities=11% Similarity=-0.055 Sum_probs=39.8
Q ss_pred cHHHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCc-ccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
Q 014892 44 WWRNLERKVPDISKSGFTSVWLPPATHSFAPEGY-LPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMA 111 (416)
Q Consensus 44 ~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY-~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~Vil 111 (416)
+.+....-+|+-+++|+..|.+-==+. .++. ...|+....+ ..++++||+-|+++|++|+|
T Consensus 30 ~t~~~k~yIDfAa~~G~eYvlvD~GW~---~~~~~~~~d~~~~~~----~~dl~elv~Ya~~KgVgi~l 91 (273)
T PF10566_consen 30 TTETQKRYIDFAAEMGIEYVLVDAGWY---GWEKDDDFDFTKPIP----DFDLPELVDYAKEKGVGIWL 91 (273)
T ss_dssp SHHHHHHHHHHHHHTT-SEEEEBTTCC---GS--TTT--TT-B-T----T--HHHHHHHHHHTT-EEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEeccccc---cccccccccccccCC----ccCHHHHHHHHHHcCCCEEE
Confidence 899999999999999999999911111 0111 2344445544 37899999999999999998
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is the 97th family of glycosidases, in this case bacterial. The central part of the GH97 family protein sequences represents a typical and complete (beta/alpha)8-barrel or catalytic TIM-barrel type domain. The N- and C-terminal parts of the sequences, mainly consisting of beta-strands, most probably form two additional non-catalytic domains with as yet unknown functions. The non-catalytic domains of glycosidases from the alpha-galactosidase and alpha-glucosidase superfamilies are also predominantly composed of beta-strands, and at least some of these domains are involved in oligomerisation and carbohydrate binding. In all known glycosidases with the (beta-alpha)8-barrel fold, the amino acid residues at the active site are located on the C-termini of the beta-strands []. ; PDB: 2JKP_A 2JKE_A 2D73_B 2ZQ0_B 2JKA_A 3A24_A. |
| >PF11852 DUF3372: Domain of unknown function (DUF3372); InterPro: IPR024561 This entry represents the uncharacterised C-terminal domain of secreted (or membrane-anchored) pullulanases of Gram-negative bacteria and pullulanase-type starch debranching enzymes of plants | Back alignment and domain information |
|---|
Probab=83.76 E-value=2.4 Score=36.92 Aligned_cols=49 Identities=8% Similarity=0.198 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHhCcccCCCC-------eEEEEec----CCEEEEEE-C------------CEEEEEEcCCC
Q 014892 346 IHNQIVKLMDVRRQQDIHSRSS-------IKILEAQ----SNLYSAII-G------------DKVCMKIGDGS 394 (416)
Q Consensus 346 l~~~~~~Li~lR~~~~~l~~G~-------~~~~~~~----~~~~~~~R-~------------~~~lvvinn~~ 394 (416)
..++++.|++||+++|.++-++ ..+.... .++++.+. + +.++||+|-+.
T Consensus 43 a~~~f~elL~iR~SspLFrL~ta~~I~~rv~F~n~G~~q~pGvIvM~idDg~~~~~dlD~~~~~iVVvfNat~ 115 (168)
T PF11852_consen 43 ASAYFQELLRIRKSSPLFRLGTAEEIQQRVTFHNTGPDQTPGVIVMSIDDGAGVGADLDPNYDGIVVVFNATP 115 (168)
T ss_dssp HHHHHHHHHHHHCT-GGGG--SHHHHHHHEEEES-STT--TTEEEEEEE-SCSSSS-S-SSEEEEEEEEE-SS
T ss_pred HHHHHHHHHHHhccCccccCCCHHHHHHhccccCCCCCCCCcEEEEEecCCCccccccCCccCeEEEEEeCCC
Confidence 5899999999999999999774 4444443 46888876 2 24777777754
|
Both enzymes hydrolyse alpha-1,6 glycosidic linkages. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. ; PDB: 2Y4S_A 2FH8_A 2FH6_A 2Y5E_A 2FHC_A 2FHB_A 2FHF_A 2FGZ_A. |
| >smart00812 Alpha_L_fucos Alpha-L-fucosidase | Back alignment and domain information |
|---|
Probab=82.32 E-value=16 Score=36.46 Aligned_cols=117 Identities=15% Similarity=0.081 Sum_probs=68.5
Q ss_pred HhhhhhHHHcCCCEEEeCCCCCCC-CCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccccCcCCCCCCCC
Q 014892 49 ERKVPDISKSGFTSVWLPPATHSF-APEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGG 127 (416)
Q Consensus 49 ~~~LdyLk~LGv~~I~L~Pi~~~~-~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~ 127 (416)
.+-++-+|+.|...|-|+-=+... .-+.=..++|..++... ..+=+++|+++|+++||++-+ -|..
T Consensus 84 ~~Wa~~~k~AGakY~vlTaKHHDGF~lw~S~~t~~n~~~~~p-krDiv~el~~A~rk~Glk~G~----Y~S~-------- 150 (384)
T smart00812 84 EEWADLFKKAGAKYVVLTAKHHDGFCLWDSKYSNWNAVDTGP-KRDLVGELADAVRKRGLKFGL----YHSL-------- 150 (384)
T ss_pred HHHHHHHHHcCCCeEEeeeeecCCccccCCCCCCCcccCCCC-CcchHHHHHHHHHHcCCeEEE----EcCH--------
Confidence 444778899999988877543221 11111233555555444 457799999999999999998 1221
Q ss_pred cccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHH---HHHHHHHHHhcCCCeEEecccCC
Q 014892 128 KYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDI---IAWLRWLRNTVGFQDFRFDFARG 200 (416)
Q Consensus 128 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l---~~~~~~w~~~~gvDGfRlD~a~~ 200 (416)
.+|+... |.+.. .........+...+++ ..-++-++..||-|.+=+|.+..
T Consensus 151 ---------~DW~~p~---y~~~~----------~~~~~~~~~~~~~~y~~~~~~Ql~ELit~Ygpd~lWfD~~~~ 204 (384)
T smart00812 151 ---------FDWFNPL---YAGPT----------SSDEDPDNWPRFQEFVDDWLPQLRELVTRYKPDLLWFDGGWE 204 (384)
T ss_pred ---------HHhCCCc---ccccc----------ccccccccchhHHHHHHHHHHHHHHHHhcCCCceEEEeCCCC
Confidence 1222110 00000 0000011234456666 66677888899999999998743
|
O-Glycosyl hydrolases (EC 3.2.1.-) are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site PUBMED:. Because the fold of proteins is better conserved than their sequences, some of the families can be grouped in 'clans'. Family 29 encompasses alpha-L-fucosidases, which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Deficiency of alpha-L-fucosidase results in the lysosomal storage disease fucosidosis. |
| >TIGR03356 BGL beta-galactosidase | Back alignment and domain information |
|---|
Probab=81.97 E-value=8.4 Score=39.04 Aligned_cols=64 Identities=13% Similarity=0.193 Sum_probs=44.7
Q ss_pred cHHHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEc
Q 014892 44 WWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIV 114 (416)
Q Consensus 44 ~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V 114 (416)
.+.-..+-++-||+||++++=++=-+..--..|-. .+ .-...+=+.++|++|.++||++|+++.
T Consensus 52 ~y~~y~eDi~l~~~~G~~~~R~si~Wsri~p~g~~-----~~--n~~~~~~y~~~i~~l~~~gi~pivtL~ 115 (427)
T TIGR03356 52 HYHRYEEDVALMKELGVDAYRFSIAWPRIFPEGTG-----PV--NPKGLDFYDRLVDELLEAGIEPFVTLY 115 (427)
T ss_pred HHHhHHHHHHHHHHcCCCeEEcccchhhcccCCCC-----Cc--CHHHHHHHHHHHHHHHHcCCeeEEeec
Confidence 56778899999999999998875433222112210 11 112356689999999999999999984
|
|
| >cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides | Back alignment and domain information |
|---|
Probab=81.38 E-value=4.2 Score=39.12 Aligned_cols=122 Identities=10% Similarity=0.103 Sum_probs=69.6
Q ss_pred cHHHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCC-----------CCCCCCHHHHHHHHHHHHHCCCEEEEE
Q 014892 44 WWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSL-----------NSSYGSEHLLKALLHKMKQHKVRAMAD 112 (416)
Q Consensus 44 ~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~i-----------d~~~Gt~~d~~~Lv~~aH~~Gi~VilD 112 (416)
..+-|.+-+|.++.+++|.++|-=- .. ..+.+....|=.+ ...+=|.+|+++||+-|.++||.||-.
T Consensus 14 ~~~~lk~~id~ma~~K~N~lhlHl~-D~-~~~~le~~~~p~l~~~g~~~~~~~~~~~yT~~di~elv~yA~~rgI~viPE 91 (303)
T cd02742 14 SVESIKRTIDVLARYKINTFHWHLT-DD-QAWRIESKKFPELAEKGGQINPRSPGGFYTYAQLKDIIEYAAARGIEVIPE 91 (303)
T ss_pred CHHHHHHHHHHHHHhCCcEEEEeee-cC-CCceEeeCccchhhhhcccccCCCCCCeECHHHHHHHHHHHHHcCCEEEEe
Confidence 4677888888899999999977310 00 0011111111111 111226899999999999999999987
Q ss_pred E-ccccCcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhc
Q 014892 113 I-VINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTV 188 (416)
Q Consensus 113 ~-V~NH~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~ 188 (416)
+ +|.|+..-... | +.-.+....+.. ....-..||..+|++.+++.+.+..+++-+
T Consensus 92 iD~PGH~~a~~~~----~-----------p~l~~~~~~~~~------~~~~~~~l~~~~~~t~~fl~~l~~e~~~lf 147 (303)
T cd02742 92 IDMPGHSTAFVKS----F-----------PKLLTECYAGLK------LRDVFDPLDPTLPKGYDFLDDLFGEIAELF 147 (303)
T ss_pred ccchHHHHHHHHh----C-----------HHhccCccccCC------CCCCCCccCCCCccHHHHHHHHHHHHHHhC
Confidence 7 35566541100 0 000000000000 001113488899999999999999888544
|
These enzymes are broadly distributed in microorganisms, plants and animals, and play roles in various key physiological and pathological processes. These processes include cell structural integrity, energy storage, cellular signaling, fertilization, pathogen defense, viral penetration, the development of carcinomas, inflammatory events and lysosomal storage disorders. The GH20 enzymes include the eukaryotic beta-N-acetylhexosaminidases A and B, the bacterial chitobiases, dispersin B, and lacto-N-biosidase. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by the solvent or the enzyme, but by the substrate itself. |
| >COG3867 Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=80.27 E-value=5.4 Score=37.76 Aligned_cols=55 Identities=16% Similarity=0.221 Sum_probs=35.2
Q ss_pred HhhhhhHHHcCCCEEEe----CCCCCCCCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Q 014892 49 ERKVPDISKSGFTSVWL----PPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADI 113 (416)
Q Consensus 49 ~~~LdyLk~LGv~~I~L----~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~ 113 (416)
.+.|.-||.-|||.|=| -| .++ ...||.-- .+..+...++.+.|.++||||++|+
T Consensus 66 qD~~~iLK~~GvNyvRlRvwndP-~ds-ngn~yggG--------nnD~~k~ieiakRAk~~GmKVl~dF 124 (403)
T COG3867 66 QDALQILKNHGVNYVRLRVWNDP-YDS-NGNGYGGG--------NNDLKKAIEIAKRAKNLGMKVLLDF 124 (403)
T ss_pred HHHHHHHHHcCcCeEEEEEecCC-ccC-CCCccCCC--------cchHHHHHHHHHHHHhcCcEEEeec
Confidence 34577899999998765 33 111 11222211 1234455667788999999999998
|
|
| >PF02679 ComA: (2R)-phospho-3-sulfolactate synthase (ComA); InterPro: IPR003830 Methanogenic archaea produce methane via the anaerobic reduction of acetate or single carbon compounds [] | Back alignment and domain information |
|---|
Probab=80.26 E-value=4.3 Score=37.60 Aligned_cols=48 Identities=15% Similarity=0.347 Sum_probs=36.1
Q ss_pred HHhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Q 014892 48 LERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADI 113 (416)
Q Consensus 48 i~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~ 113 (416)
+.+-|+++|+|||++|+++= |.-.. +.++..++|+.+.++|++|+-.+
T Consensus 86 ~~~yl~~~k~lGf~~IEiSd--------Gti~l----------~~~~r~~~I~~~~~~Gf~v~~Ev 133 (244)
T PF02679_consen 86 FDEYLEECKELGFDAIEISD--------GTIDL----------PEEERLRLIRKAKEEGFKVLSEV 133 (244)
T ss_dssp HHHHHHHHHHCT-SEEEE----------SSS-------------HHHHHHHHHHHCCTTSEEEEEE
T ss_pred HHHHHHHHHHcCCCEEEecC--------CceeC----------CHHHHHHHHHHHHHCCCEEeecc
Confidence 45668899999999999863 32222 37889999999999999999876
|
Coenzyme M (CoM; 2-mercaptoethanesulphonic acid) serves as the terminal methyl carrier for this process. Previously thought to be unique to methanogenic archaea, CoM has also been found in methylotrophic bacteria. Biosynthesis of CoM begins with the Michael addition of sulphite to phosphoenolpyruvate, forming 2-phospho-3-sulpholactate (PSL). This reaction is catalyzed by members of this family, PSL synthase (ComA) []. Subsequently, PSL is dephosphorylated by phosphosulpholactate phosphatase (ComB) to form 3-sulpholactate [], which is then converted to 3-sulphopyruvate by L-sulpholactate dehydrogenase (ComC; 1.1.1.272 from EC) []. Sulphopyruvate decarboxylase (ComDE; 4.1.1.79 from EC) converts 3-sulphopyruvate to sulphoacetaldehyde []. Reductive thiolation of sulphoacetaldehyde is the final step.; GO: 0019295 coenzyme M biosynthetic process; PDB: 1U83_A 1QWG_A. |
| >PLN03236 4-alpha-glucanotransferase; Provisional | Back alignment and domain information |
|---|
Probab=80.17 E-value=3.8 Score=44.17 Aligned_cols=24 Identities=17% Similarity=0.137 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHCCCEEEEEEccc
Q 014892 93 HLLKALLHKMKQHKVRAMADIVIN 116 (416)
Q Consensus 93 ~d~~~Lv~~aH~~Gi~VilD~V~N 116 (416)
++++++.+.|+++||++|.|+-+-
T Consensus 274 ~Q~~~~~~yA~~~GI~L~GDLPIg 297 (745)
T PLN03236 274 RQLRRAAAHAAAKGVILKGDLPIG 297 (745)
T ss_pred HHHHHHHHHHHHCCCEEEEEeece
Confidence 468889999999999999999876
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 416 | ||||
| 1ava_A | 403 | Amy2BASI PROTEIN-Protein Complex From Barley Seed L | 1e-102 | ||
| 3bsg_A | 414 | Barley Alpha-Amylase Isozyme 1 (Amy1) H395a Mutant | 1e-102 | ||
| 2qps_A | 405 | "sugar Tongs" Mutant Y380a In Complex With Acarbose | 1e-101 | ||
| 1ht6_A | 405 | Crystal Structure At 1.5a Resolution Of The Barley | 1e-101 | ||
| 2qpu_A | 405 | Sugar Tongs Mutant S378p In Complex With Acarbose L | 1e-101 | ||
| 3bsh_A | 414 | Barley Alpha-Amylase Isozyme 1 (Amy1) Double Mutant | 1e-100 | ||
| 1rp8_A | 405 | Crystal Structure Of Barley Alpha-Amylase Isozyme 1 | 1e-100 | ||
| 1gcy_A | 527 | High Resolution Crystal Structure Of Maltotetraose- | 3e-29 | ||
| 2amg_A | 418 | Structure Of Hydrolase (Glycosidase) Length = 418 | 3e-29 | ||
| 1jda_A | 429 | Maltotetraose-Forming Exo-Amylase Length = 429 | 6e-29 | ||
| 1qi3_A | 429 | Mutant (D193n) Maltotetraose-Forming Exo-Amylase In | 8e-29 | ||
| 1qi5_A | 429 | Mutant (D294n) Maltotetraose-Forming Exo-Amylase In | 8e-29 | ||
| 1qi4_A | 429 | Mutant (e219g) Maltotetraose-forming Exo-amylase In | 2e-28 | ||
| 1qpk_A | 418 | Mutant (D193g) Maltotetraose-Forming Exo-Amylase In | 2e-28 | ||
| 3qgv_A | 435 | Crystal Structure Of A Thermostable Amylase Variant | 8e-21 | ||
| 1mwo_A | 435 | Crystal Structure Analysis Of The Hyperthermostable | 2e-20 | ||
| 3bc9_A | 599 | Alpha-Amylase B In Complex With Acarbose Length = 5 | 2e-20 | ||
| 3bh4_A | 483 | High Resolution Crystal Structure Of Bacillus Amylo | 3e-13 | ||
| 1e3x_A | 483 | Native Structure Of Chimaeric Amylase From B. Amylo | 4e-13 | ||
| 1hvx_A | 515 | Bacillus Stearothermophilus Alpha-Amylase Length = | 3e-10 | ||
| 1vjs_A | 483 | Structure Of Alpha-Amylase Precursor Length = 483 | 3e-10 | ||
| 2guy_A | 478 | Orthorhombic Crystal Structure (Space Group P21212) | 5e-10 | ||
| 1bli_A | 483 | Bacillus Licheniformis Alpha-Amylase Length = 483 | 9e-10 | ||
| 1ob0_A | 483 | Kinetic Stabilization Of Bacillus Licheniformis-Amy | 1e-09 | ||
| 2gjp_A | 485 | Structure Of Bacillus Halmapalus Alpha-Amylase, Cry | 2e-09 | ||
| 1w9x_A | 481 | Bacillus Halmapalus Alpha Amylase Length = 481 | 2e-09 | ||
| 1ud2_A | 480 | Crystal Structure Of Calcium-Free Alpha-Amylase Fro | 3e-09 | ||
| 1ud3_A | 480 | Crystal Structure Of Amyk38 N289h Mutant Length = 4 | 4e-09 | ||
| 2taa_A | 478 | Structure And Possible Catalytic Residues Of Taka-A | 4e-09 | ||
| 2aaa_A | 484 | Calcium Binding In Alpha-Amylases: An X-Ray Diffrac | 4e-07 | ||
| 2die_A | 485 | Alkaline Alpha-Amylase Amyk From Bacillus Sp. Ksm-1 | 4e-07 | ||
| 1wp6_A | 485 | Crystal Structure Of Maltohexaose-producing Amylase | 9e-06 | ||
| 1wza_A | 488 | Crystal Structure Of Alpha-Amylase From H.Orenii Le | 1e-05 | ||
| 1bpl_B | 294 | Glycosyltransferase Length = 294 | 2e-05 | ||
| 1bpl_A | 189 | Glycosyltransferase Length = 189 | 6e-05 | ||
| 1lwh_A | 441 | Crystal Structure Of T. Maritima 4-Alpha-Glucanotra | 3e-04 | ||
| 2ya1_A | 1014 | Product Complex Of A Multi-Modular Glycogen-Degradi | 5e-04 | ||
| 2ya2_A | 708 | Catalytic Module Of The Multi-Modular Glycogen-Degr | 5e-04 | ||
| 2ya0_A | 714 | Catalytic Module Of The Multi-Modular Glycogen-Degr | 6e-04 | ||
| 4aie_A | 549 | Structure Of Glucan-1,6-Alpha-Glucosidase From Lact | 8e-04 |
| >pdb|1AVA|A Chain A, Amy2BASI PROTEIN-Protein Complex From Barley Seed Length = 403 | Back alignment and structure |
|
| >pdb|3BSG|A Chain A, Barley Alpha-Amylase Isozyme 1 (Amy1) H395a Mutant Length = 414 | Back alignment and structure |
|
| >pdb|2QPS|A Chain A, "sugar Tongs" Mutant Y380a In Complex With Acarbose Length = 405 | Back alignment and structure |
|
| >pdb|1HT6|A Chain A, Crystal Structure At 1.5a Resolution Of The Barley Alpha- Amylase Isozyme 1 Length = 405 | Back alignment and structure |
|
| >pdb|2QPU|A Chain A, Sugar Tongs Mutant S378p In Complex With Acarbose Length = 405 | Back alignment and structure |
|
| >pdb|3BSH|A Chain A, Barley Alpha-Amylase Isozyme 1 (Amy1) Double Mutant Y105aY380A IN COMPLEX WITH INHIBITOR ACARBOSE Length = 414 | Back alignment and structure |
|
| >pdb|1RP8|A Chain A, Crystal Structure Of Barley Alpha-Amylase Isozyme 1 (Amy1) Inactive Mutant D180a In Complex With Maltoheptaose Length = 405 | Back alignment and structure |
|
| >pdb|1GCY|A Chain A, High Resolution Crystal Structure Of Maltotetraose-Forming Exo-Amylase Length = 527 | Back alignment and structure |
|
| >pdb|2AMG|A Chain A, Structure Of Hydrolase (Glycosidase) Length = 418 | Back alignment and structure |
|
| >pdb|1JDA|A Chain A, Maltotetraose-Forming Exo-Amylase Length = 429 | Back alignment and structure |
|
| >pdb|1QI3|A Chain A, Mutant (D193n) Maltotetraose-Forming Exo-Amylase In Complex With Maltotetraose Length = 429 | Back alignment and structure |
|
| >pdb|1QI5|A Chain A, Mutant (D294n) Maltotetraose-Forming Exo-Amylase In Complex With Maltotetraose Length = 429 | Back alignment and structure |
|
| >pdb|1QI4|A Chain A, Mutant (e219g) Maltotetraose-forming Exo-amylase In Complex With Maltotetraose Length = 429 | Back alignment and structure |
|
| >pdb|1QPK|A Chain A, Mutant (D193g) Maltotetraose-Forming Exo-Amylase In Complex With Maltotetraose Length = 418 | Back alignment and structure |
|
| >pdb|3QGV|A Chain A, Crystal Structure Of A Thermostable Amylase Variant Length = 435 | Back alignment and structure |
|
| >pdb|1MWO|A Chain A, Crystal Structure Analysis Of The Hyperthermostable Pyrocoocus Woesei Alpha-Amylase Length = 435 | Back alignment and structure |
|
| >pdb|3BC9|A Chain A, Alpha-Amylase B In Complex With Acarbose Length = 599 | Back alignment and structure |
|
| >pdb|3BH4|A Chain A, High Resolution Crystal Structure Of Bacillus Amyloliquefaciens Alpha-Amylase Length = 483 | Back alignment and structure |
|
| >pdb|1E3X|A Chain A, Native Structure Of Chimaeric Amylase From B. Amyloliquefaciens And B. Licheniformis At 1.92a Length = 483 | Back alignment and structure |
|
| >pdb|1HVX|A Chain A, Bacillus Stearothermophilus Alpha-Amylase Length = 515 | Back alignment and structure |
|
| >pdb|1VJS|A Chain A, Structure Of Alpha-Amylase Precursor Length = 483 | Back alignment and structure |
|
| >pdb|2GUY|A Chain A, Orthorhombic Crystal Structure (Space Group P21212) Of Aspergillus Niger Alpha-Amylase At 1.6 A Resolution Length = 478 | Back alignment and structure |
|
| >pdb|1BLI|A Chain A, Bacillus Licheniformis Alpha-Amylase Length = 483 | Back alignment and structure |
|
| >pdb|1OB0|A Chain A, Kinetic Stabilization Of Bacillus Licheniformis-Amylase Through Introduction Of Hydrophobic Residues At The Surface Length = 483 | Back alignment and structure |
|
| >pdb|2GJP|A Chain A, Structure Of Bacillus Halmapalus Alpha-Amylase, Crystallized With The Substrate Analogue Acarbose And Maltose Length = 485 | Back alignment and structure |
|
| >pdb|1W9X|A Chain A, Bacillus Halmapalus Alpha Amylase Length = 481 | Back alignment and structure |
|
| >pdb|1UD2|A Chain A, Crystal Structure Of Calcium-Free Alpha-Amylase From Bacillus Sp. Strain Ksm-K38 (Amyk38) Length = 480 | Back alignment and structure |
|
| >pdb|1UD3|A Chain A, Crystal Structure Of Amyk38 N289h Mutant Length = 480 | Back alignment and structure |
|
| >pdb|2TAA|A Chain A, Structure And Possible Catalytic Residues Of Taka-Amylase A Length = 478 | Back alignment and structure |
|
| >pdb|2AAA|A Chain A, Calcium Binding In Alpha-Amylases: An X-Ray Diffraction Study At 2.1 Angstroms Resolution Of Two Enzymes From Aspergillus Length = 484 | Back alignment and structure |
|
| >pdb|2DIE|A Chain A, Alkaline Alpha-Amylase Amyk From Bacillus Sp. Ksm-1378 Length = 485 | Back alignment and structure |
|
| >pdb|1WP6|A Chain A, Crystal Structure Of Maltohexaose-producing Amylase From Alkalophilic Bacillus Sp.707. Length = 485 | Back alignment and structure |
|
| >pdb|1WZA|A Chain A, Crystal Structure Of Alpha-Amylase From H.Orenii Length = 488 | Back alignment and structure |
|
| >pdb|1BPL|B Chain B, Glycosyltransferase Length = 294 | Back alignment and structure |
|
| >pdb|1BPL|A Chain A, Glycosyltransferase Length = 189 | Back alignment and structure |
|
| >pdb|1LWH|A Chain A, Crystal Structure Of T. Maritima 4-Alpha-Glucanotransferase Length = 441 | Back alignment and structure |
|
| >pdb|2YA1|A Chain A, Product Complex Of A Multi-Modular Glycogen-Degrading Pneumococcal Virulence Factor Spua Length = 1014 | Back alignment and structure |
|
| >pdb|2YA2|A Chain A, Catalytic Module Of The Multi-Modular Glycogen-Degrading Pneumococcal Virulence Factor Spua In Complex With An Inhibitor Length = 708 | Back alignment and structure |
|
| >pdb|2YA0|A Chain A, Catalytic Module Of The Multi-Modular Glycogen-Degrading Pneumococcal Virulence Factor Spua Length = 714 | Back alignment and structure |
|
| >pdb|4AIE|A Chain A, Structure Of Glucan-1,6-Alpha-Glucosidase From Lactobacillus Acidophilus Ncfm Length = 549 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 416 | |||
| 1ht6_A | 405 | AMY1, alpha-amylase isozyme 1; barley, beta-alpha- | 1e-143 | |
| 1gcy_A | 527 | Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-b | 1e-104 | |
| 3bc9_A | 599 | AMYB, alpha amylase, catalytic region; acarbose, t | 2e-83 | |
| 1mxg_A | 435 | Alpha amylase; hyperthermostable, family 13 glycos | 2e-78 | |
| 1wpc_A | 485 | Glucan 1,4-alpha-maltohexaosidase; maltohexaose-pr | 1e-67 | |
| 1ud2_A | 480 | Amylase, alpha-amylase; calcium-free, alkaline, hy | 2e-66 | |
| 3bh4_A | 483 | Alpha-amylase; calcium, carbohydrate metabolism, g | 2e-62 | |
| 1hvx_A | 515 | Alpha-amylase; hydrolase, glycosyltransferase, the | 2e-48 | |
| 1hx0_A | 496 | Alpha amylase (PPA); inhibitor, carbohydrate, panc | 8e-36 | |
| 1g94_A | 448 | Alpha-amylase; beta-alpha-8-barrel, 3 domain struc | 4e-24 | |
| 1ua7_A | 422 | Alpha-amylase; beta-alpha-barrels, acarbose, greek | 1e-22 | |
| 1cyg_A | 680 | Cyclodextrin glucanotransferase; glycosyltransfera | 5e-20 | |
| 2aaa_A | 484 | Alpha-amylase; glycosidase; 2.10A {Aspergillus nig | 6e-20 | |
| 3edf_A | 601 | FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin c | 1e-19 | |
| 1d3c_A | 686 | Cyclodextrin glycosyltransferase; alpha-amylase, p | 2e-19 | |
| 3bmv_A | 683 | Cyclomaltodextrin glucanotransferase; glycosidase, | 3e-19 | |
| 3aie_A | 844 | Glucosyltransferase-SI; beta-alpha-barrels; HET: M | 1e-17 | |
| 3aie_A | 844 | Glucosyltransferase-SI; beta-alpha-barrels; HET: M | 2e-17 | |
| 2guy_A | 478 | Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; | 2e-17 | |
| 1qho_A | 686 | Alpha-amylase; glycoside hydrolase, starch degrada | 6e-17 | |
| 1jae_A | 471 | Alpha-amylase; glycosidase, carbohydrate metabolis | 1e-16 | |
| 1j0h_A | 588 | Neopullulanase; beta-alpha-barrels, hydrolase; 1.9 | 9e-12 | |
| 1ea9_C | 583 | Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A | 1e-11 | |
| 2z1k_A | 475 | (NEO)pullulanase; hydrolase, structural genomics, | 1e-10 | |
| 2wc7_A | 488 | Alpha amylase, catalytic region; CD/PUL-hydrolyzin | 2e-10 | |
| 1wzl_A | 585 | Alpha-amylase II; pullulan, GH-13, alpha-amylase f | 2e-10 | |
| 3dhu_A | 449 | Alpha-amylase; structural genomics, hydrolase, gly | 6e-10 | |
| 3ttq_A | 1108 | Dextransucrase; (beta/alpha)8 barrel, transferase; | 7e-10 | |
| 3ttq_A | 1108 | Dextransucrase; (beta/alpha)8 barrel, transferase; | 1e-06 | |
| 1ji1_A | 637 | Alpha-amylase I; beta/alpha barrel, hydrolase; 1.6 | 6e-09 | |
| 3klk_A | 1039 | Glucansucrase; native form, open conformation, mul | 1e-08 | |
| 3klk_A | 1039 | Glucansucrase; native form, open conformation, mul | 3e-06 | |
| 4aee_A | 696 | Alpha amylase, catalytic region; hydrolase, hypert | 1e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-07 | |
| 3ucq_A | 655 | Amylosucrase; thermostability, amylose synthesis, | 2e-04 | |
| 1g5a_A | 628 | Amylosucrase; glycosyltransferase, glycoside hydro | 2e-04 | |
| 3czg_A | 644 | Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; | 3e-04 | |
| 1r7a_A | 504 | Sucrose phosphorylase; beta-alpha-barrels, dimer, | 3e-04 |
| >1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A* Length = 405 | Back alignment and structure |
|---|
Score = 414 bits (1065), Expect = e-143
Identities = 188/407 (46%), Positives = 258/407 (63%), Gaps = 23/407 (5%)
Query: 29 EILFQGFNWESCKHD--WWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLN 86
++LFQGFNWES K W+ + KV DI+ +G T VWLPP +HS + EGY+P LY ++
Sbjct: 2 QVLFQGFNWESWKQSGGWYNMMMGKVDDIAAAGVTHVWLPPPSHSVSNEGYMPGRLYDID 61
Query: 87 SS-YGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLS----WDE 141
+S YG+ LK+L+ + V+A+ADIVINHR + G Y ++G W
Sbjct: 62 ASKYGNAAELKSLIGALHGKGVQAIADIVINHRCADYKDSRGIYCIFEGGTSDGRLDWGP 121
Query: 142 HAV----TSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDF 197
H + T + G N TG +F P+IDH V++++ WL WL++ +GF +R DF
Sbjct: 122 HMICRDDTKYSDGTANLDTGADFAAAPDIDHLNDRVQRELKEWLLWLKSDLGFDAWRLDF 181
Query: 198 ARGYSAKYVKEYIEGARPIFSVGEYWDSCNYNSHG-LDYNQDSHRQRIINWIDGTGQLS- 255
ARGYS + K YI+G P +V E WD+ G +Y+QD+HRQ ++NW+D G +
Sbjct: 182 ARGYSPEMAKVYIDGTSPSLAVAEVWDNMATGGDGKPNYDQDAHRQNLVNWVDKVGGAAS 241
Query: 256 --AAFDFTTKGILQEAVKGQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPF 313
FDFTTKGIL AV+G+ WRL D QGK PGVMGWWP++AVTF+DNHDTGSTQA WPF
Sbjct: 242 AGMVFDFTTKGILNAAVEGELWRLIDPQGKAPGVMGWWPAKAVTFVDNHDTGSTQAMWPF 301
Query: 314 PSNHIMEGYAYILMHPGIPSVFYDHFYDWGDSIHNQIVKLMDVRRQQDIHSRSSIKILEA 373
PS+ +M+GYAYIL HPGIP +FYDHF++WG +QI L+ +R++ I + S++KIL
Sbjct: 302 PSDKVMQGYAYILTHPGIPCIFYDHFFNWG--FKDQIAALVAIRKRNGITATSALKILMH 359
Query: 374 QSNLYSAIIGDKVCMKIG----DGSWCPAGKEWTLATSGHKYAVWHK 416
+ + Y A I KV +KIG G+ PAG + + G+ YAVW K
Sbjct: 360 EGDAYVAEIDGKVVVKIGSRYDVGAVIPAG--FVTSAHGNDYAVWEK 404
|
| >1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A* Length = 527 | Back alignment and structure |
|---|
Score = 318 bits (816), Expect = e-104
Identities = 107/431 (24%), Positives = 163/431 (37%), Gaps = 40/431 (9%)
Query: 13 QQTDLVKIRAVIRNGREILFQGFNWESCK---HDWWRNLERKVPDISKSGFTSVWLPPA- 68
Q G EI+ QGF+W + +DW+ L ++ I+ GF+++W+P
Sbjct: 1 DQAGKSPNAVRYHGGDEIILQGFHWNVVREAPNDWYNILRQQAATIAADGFSAIWMPVPW 60
Query: 69 ---------THSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRV 119
+ S EGY + ++ N YGS+ L+ + V+ + D+V NH
Sbjct: 61 RDFSSWSDGSKSGGGEGYFWHD-FNKNGRYGSDAQLRQAASALGGAGVKVLYDVVPNHMN 119
Query: 120 GTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIA 179
G W G +++ V
Sbjct: 120 RGYPDKEINLPAGQG---FWRNDCADPGNYPNDCDDGDRFIGGDADLNTGHPQVYGMFRD 176
Query: 180 WLRWLRNTVGFQDFRFDFARGYSAKYVKEYI-EGARPIFSVGEYWDSCNYNSHGLDYNQD 238
LR+ G FRFDF RGY+ + V ++ + A F VGE W + + N
Sbjct: 177 EFTNLRSQYGAGGFRFDFVRGYAPERVNSWMTDSADNSFCVGELWKGPSEYPNWDWRNTA 236
Query: 239 SHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKGQFWRLRDAQGKPPGVMGWWPSRAVTF 298
S +Q I +W D FDF K +Q + + P W AVTF
Sbjct: 237 SWQQIIKDWSDRAK--CPVFDFALKERMQNGSIADWKHGLNGNPDP-----RWREVAVTF 289
Query: 299 LDNHDTGSTQ------AHWPFPSNHIMEGYAYILMHPGIPSVFYDHFYDWGDSIHNQIVK 352
+DNHDTG + HW I + YAYIL PG P V++DH YDWG + I +
Sbjct: 290 VDNHDTGYSPGQNGGQHHWALQDGLIRQAYAYILTSPGTPVVYWDHMYDWGY--GDFIRQ 347
Query: 353 LMDVRRQQDIHSRSSIKILEAQSNLYSAIIGDKVCMKIGDGS-------WCPAGKEWTLA 405
L+ VRR + + S+I S L + + G + + + S +
Sbjct: 348 LIQVRRAAGVRADSAISFHSGYSGLVATVSGSQQTLVVALNSDLGNPGQVASGSFSEAVN 407
Query: 406 TSGHKYAVWHK 416
S + VW
Sbjct: 408 ASNGQVRVWRS 418
|
| >3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A Length = 599 | Back alignment and structure |
|---|
Score = 266 bits (680), Expect = 2e-83
Identities = 95/475 (20%), Positives = 177/475 (37%), Gaps = 107/475 (22%)
Query: 26 NGREILFQGFNWESCKHD----------WWRNLERKVPDISKSGFTSVWLPPATHSFAP- 74
+ Q F WE + W L + P+++++GFT+VWLPPA A
Sbjct: 120 EVNHTILQAFYWEMNTGEYATEHPEEANLWNLLAERAPELAEAGFTAVWLPPANKGMAGI 179
Query: 75 --EGYLPQNLY---------SLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQ 123
GY +L+ ++ + YG++ L+ + + + ++ D V+NHR+G
Sbjct: 180 HDVGYGTYDLWDLGEFDQKGTVRTKYGTKGELENAIDALHNNDIKVYFDAVLNHRMGADY 239
Query: 124 ---------------------------GHGGKYNRYDGIP-----LSWDEHAVTSC---- 147
G G+Y+ + WD+++ S
Sbjct: 240 AETVLLDENSRDKPGQYIKAWTGFNFPGRNGEYSNFTWNGQCFDGTDWDDYSKESGKYLF 299
Query: 148 --TGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKY 205
+ +++ ++D+ V+ D+I W +W+ N + F FR D + ++
Sbjct: 300 DEKSWDWTYNWDEDYLMGADVDYENEAVQNDVIDWGQWIINNIDFDGFRLDAVKHIDYRF 359
Query: 206 VKEYIEGAR-----PIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQ-LSAAFD 259
+ +++ + +F VGE W + ++D G FD
Sbjct: 360 IDKWMSAVQNSSNRDVFFVGEAW--------------VEDVDDLKGFLDTVGNPDLRVFD 405
Query: 260 FTTKGILQEAVKGQ-FWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFP-SNH 317
F + + + G LR+A + +RAVTF+DNHDT + + +
Sbjct: 406 FPLRSFFVDMLNGAYMADLRNAG---LVNSPGYENRAVTFVDNHDTDRDEGSYTVSIYSR 462
Query: 318 IMEGYAYILMH-PGIPSVFYDHFYDWGDSIHNQIVKLMDVRRQQDIHSRSSIKILEAQSN 376
+ YAYIL G+P+V++ +Y W + KL+ RR ++ ++
Sbjct: 463 KYQAYAYILTRAEGVPTVYWKDYYIWEM--KEGLDKLLTARRYYAYGPGY--EVDNNDAD 518
Query: 377 LYSAI-------IGDKVCMKIGDGSWCP----------AGKEWTLATSGHKYAVW 414
+YS + GD + + I DG+ E+ T K V
Sbjct: 519 IYSYVRSGFPDVAGDGLVLMISDGTSGNVAGKWINSRQPDTEFYDLTGHIKEHVT 573
|
| >1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A* Length = 435 | Back alignment and structure |
|---|
Score = 248 bits (635), Expect = 2e-78
Identities = 85/410 (20%), Positives = 163/410 (39%), Gaps = 54/410 (13%)
Query: 30 ILFQGFNWESCKH-DWWRNLERKVPDISKSGFTSVWLPPATHSFAP---EGYLPQNLY-- 83
++ Q F W+ WW ++ K+P+ ++G +++WLPP + + GY P + +
Sbjct: 11 VIMQAFYWDVPGGGIWWDHIRSKIPEWYEAGISAIWLPPPSKGMSGGYSMGYDPYDYFDL 70
Query: 84 -------SLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGH-----GGKYNR 131
++ + +GS+ L L+ + ++ +AD+VINHR G +
Sbjct: 71 GEYYQKGTVETRFGSKEELVRLIQTAHAYGIKVIADVVINHRAGGDLEWNPFVGDYTWTD 130
Query: 132 YDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIA---WLRWLRNTV 188
+ + + F G P+I H + + + + ++
Sbjct: 131 FSKVASGKYTANYLDFHPNELHCCDEGTFGGFPDICHHKEWDQYWLWKSNESYAAYLRSI 190
Query: 189 GFQDFRFDFARGYSAKYVKEYIEGARPIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWI 248
GF +RFD+ +GY A V++++ ++VGEYWD+ + +++W
Sbjct: 191 GFDGWRFDYVKGYGAWVVRDWLNWWGG-WAVGEYWDT--------------NVDALLSWA 235
Query: 249 DGTGQLSAAFDFTTKGILQEAVK-GQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGST 307
+G + FDF + EA L A V+ P +AVTF+ NHDT
Sbjct: 236 YESG--AKVFDFPLYYKMDEAFDNNNIPALVYALQNGQTVVSRDPFKAVTFVANHDTDII 293
Query: 308 QAHWPFPSNHIMEGYAYILMHPGIPSVFYDHFYDWGDSIHNQIVKLMDVRRQQDIHSRSS 367
+P YA+IL + G P +FY F +W + ++++ L+ + + S
Sbjct: 294 WNKYP--------AYAFILTYEGQPVIFYRDFEEWLN--KDKLINLIWIHDH---LAGGS 340
Query: 368 IKILEAQSNLYSAI-IGDKVCMKIGDG-SWCPAGKEWTLATSGHKYAVWH 415
I+ ++ + GD + + P + A H
Sbjct: 341 TTIVYYDNDELIFVRNGDSRRPGLITYINLSPNWVGRWVYVPKFAGACIH 390
|
| >1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A* Length = 485 | Back alignment and structure |
|---|
Score = 221 bits (565), Expect = 1e-67
Identities = 95/476 (19%), Positives = 162/476 (34%), Gaps = 103/476 (21%)
Query: 26 NGREILFQGFNWESCKH-DWWRNLERKVPDISKSGFTSVWLPPATHSFAPE--GYLPQNL 82
+ Q F W + W L ++ G T+VW+PPA + GY +L
Sbjct: 4 GTNGTMMQYFEWYLPNDGNHWNRLNSDASNLKSKGITAVWIPPAWKGASQNDVGYGAYDL 63
Query: 83 Y---------SLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQ---------- 123
Y ++ + YG+ L+A + +K + ++ D+V+NH+ G
Sbjct: 64 YDLGEFNQKGTVRTKYGTRSQLQAAVTSLKNNGIQVYGDVVMNHKGGADATEMVRAVEVN 123
Query: 124 -----------------------GHGGKYNRYDGI-----PLSWDEHAVTSCT------- 148
G G ++ + + WD+ +
Sbjct: 124 PNNRNQEVTGEYTIEAWTRFDFPGRGNTHSSFKWRWYHFDGVDWDQSRRLNNRIYKFRGH 183
Query: 149 -----GGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSA 203
+ + ++ +ID V ++ W W NT+G FR D +
Sbjct: 184 GKAWDWEVDTENGNYDYLMYADIDMDHPEVVNELRNWGVWYTNTLGLDGFRIDAVKHIKY 243
Query: 204 KYVKEYIEGAR-----PIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAF 258
+ +++I R +F+V E+W + I N++ T + F
Sbjct: 244 SFTRDWINHVRSATGKNMFAVAEFW--------------KNDLGAIENYLQKTNWNHSVF 289
Query: 259 DFTTKGILQEAVK-GQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFPSNH 317
D L A K G + +R+ V+ PS AVTF+DNHD+ +A F
Sbjct: 290 DVPLHYNLYNASKSGGNYDMRNIFNG--TVVQRHPSHAVTFVDNHDSQPEEALESFVEEW 347
Query: 318 IME-GYAYILMH-PGIPSVFYDHFYDWG----DSIHNQIVKLMDVRR------QQDIHSR 365
YA L G PSVFY +Y ++ ++I +++ R+ Q D
Sbjct: 348 FKPLAYALTLTREQGYPSVFYGDYYGIPTHGVPAMRSKIDPILEARQKYAYGKQNDYLDH 407
Query: 366 SSIKILEAQSNLYSAIIGDKVCMKIGDGSW-------CPAGKEWTLATSGHKYAVW 414
+I + N G M G G AG+ W+ T V
Sbjct: 408 HNIIGWTREGNTAHPNSGLATIMSDGAGGSKWMFVGRNKAGQVWSDITGNRTGTVT 463
|
| >1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A Length = 480 | Back alignment and structure |
|---|
Score = 218 bits (556), Expect = 2e-66
Identities = 93/472 (19%), Positives = 161/472 (34%), Gaps = 100/472 (21%)
Query: 26 NGREILFQGFNWESCKH-DWWRNLERKVPDISKSGFTSVWLPPAT--HSFAPEGYLPQNL 82
+ Q + W W L +S +G T++W+PPA +S A GY +L
Sbjct: 2 GLNGTMMQYYEWHLENDGQHWNRLHDDAAALSDAGITAIWIPPAYKGNSQADVGYGAYDL 61
Query: 83 YSLN---------SSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHG------G 127
Y L + YG++ L+ + +K + + D+V+NH++G
Sbjct: 62 YDLGEFNQKGTVRTKYGTKAQLERAIGSLKSNDINVYGDVVMNHKMGADFTEAVQAVQVN 121
Query: 128 KYNRYDGIPLSWDEHAVTSCTGGLGNGSTGD----------------------------- 158
NR+ I ++ A T N + D
Sbjct: 122 PTNRWQDISGAYTIDAWTGFDFSGRNNAYSDFKWRWFHFNGVDWDQRYQENHIFRFANTN 181
Query: 159 ------------NFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYV 206
++ NID + V+ ++ W W + + +R D + Y
Sbjct: 182 WNWRVDEENGNYDYLLGSNIDFSHPEVQDELKDWGSWFTDELDLDGYRLDAIKHIPFWYT 241
Query: 207 KEYIEGAR-----PIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFT 261
+++ R +F VGEYW + ++D + FD
Sbjct: 242 SDWVRHQRNEADQDLFVVGEYW--------------KDDVGALEFYLDEMNWEMSLFDVP 287
Query: 262 TKGILQEAVK-GQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFPSNHIME 320
A + G + +R+ ++ P AVTF+DNHDT ++ + ++
Sbjct: 288 LNYNFYRASQQGGSYDMRNI--LRGSLVEAHPMHAVTFVDNHDTQPGESLESWVADWFKP 345
Query: 321 -GYAYILMH-PGIPSVFYDHFY----DWGDSIHNQIVKLMDVRR------QQDIHSRSSI 368
YA IL G P+VFY +Y D + + I +L+D R+ Q D +
Sbjct: 346 LAYATILTREGGYPNVFYGDYYGIPNDNISAKKDMIDELLDARQNYAYGTQHDYFDHWDV 405
Query: 369 KILEAQSNLYSAIIGDKVCMKIGDGSW-------CPAGKEWTLATSGHKYAV 413
+ + G M G G AG+ WT T + +V
Sbjct: 406 VGWTREGSSSRPNSGLATIMSNGPGGSKWMYVGRQNAGQTWTDLTGNNGASV 457
|
| >3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A Length = 483 | Back alignment and structure |
|---|
Score = 207 bits (529), Expect = 2e-62
Identities = 95/473 (20%), Positives = 164/473 (34%), Gaps = 105/473 (22%)
Query: 30 ILFQGFNWESCKH-DWWRNLERKVPDISKSGFTSVWLPPATHSFAP--EGYLPQNLY--- 83
L Q F W + W+ L+ +S G T+VW+PPA + GY P +LY
Sbjct: 4 TLMQYFEWYTPNDGQHWKRLQNDAEHLSDIGITAVWIPPAYKGLSQSDNGYGPYDLYDLG 63
Query: 84 ------SLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVG----------------- 120
++ + YG++ L+ + + V+ D+V+NH+ G
Sbjct: 64 EFQQKGTVRTKYGTKSELQDAIGSLHSRNVQVYGDVVLNHKAGADATEDVTAVEVNPANR 123
Query: 121 ----------------TTQGHGGKYNRYDGI-----PLSWDEHA-VTSCTGGLGNGSTGD 158
G G Y+ + WDE ++ G G D
Sbjct: 124 NQETSEEYQIKAWTDFRFPGRGNTYSDFKWHWYHFDGADWDESRKISRIFKFRGEGKAWD 183
Query: 159 ----------NFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKE 208
++ ++D+ V + W W N + FR D A+ ++++
Sbjct: 184 WEVSSENGNYDYLMYADVDYDHPDVVAETKKWGIWYANELSLDGFRIDAAKHIKFSFLRD 243
Query: 209 YI-----EGARPIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTK 263
++ + +F+V EYW ++ ++ N+++ T + FD
Sbjct: 244 WVQAVRQATGKEMFTVAEYW--------------QNNAGKLENYLNKTSFNQSVFDVPLH 289
Query: 264 GILQEAVK-GQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHW-PFPSNHIMEG 321
LQ A G + +R V+ P +AVTF++NHDT Q+ +
Sbjct: 290 FNLQAASSQGGGYDMRRLLDG--TVVSRHPEKAVTFVENHDTQPGQSLESTVQTWFKPLA 347
Query: 322 YAYIL-MHPGIPSVFYDHFYDWGD-------SIHNQIVKLMDVRR------QQDIHSRSS 367
YA+IL G P VFY Y S+ + I ++ R+ Q D
Sbjct: 348 YAFILTRESGYPQVFYGDMYGTKGTSPKEIPSLKDNIEPILKARKEYAYGPQHDYIDHPD 407
Query: 368 IKILEAQSNLYSAIIGDKVCMKIGDGSW-------CPAGKEWTLATSGHKYAV 413
+ + + +A G + G G AG+ W T V
Sbjct: 408 VIGWTREGDSSAAKSGLAALITDGPGGSKRMYAGLKNAGETWYDITGNRSDTV 460
|
| >1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1 Length = 515 | Back alignment and structure |
|---|
Score = 171 bits (434), Expect = 2e-48
Identities = 84/403 (20%), Positives = 140/403 (34%), Gaps = 89/403 (22%)
Query: 29 EILFQGFNWES-CKHDWWRNLERKVPDISKSGFTSVWLPPAT--HSFAPEGYLPQNLY-- 83
+ Q F W W + + ++S G T++WLPPA S + GY +LY
Sbjct: 6 GTMMQYFEWYLPDDGTLWTKVANEANNLSSLGITALWLPPAYKGTSRSDVGYGVYDLYDL 65
Query: 84 -------SLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQ------------- 123
++ + YG++ + ++ AD+V +H+ G
Sbjct: 66 GEFNQKGAVRTKYGTKAQYLQAIQAAHAAGMQVYADVVFDHKGGADGTEWVDAVEVNPSD 125
Query: 124 --------------------GHGGKYNRYDGIPLSWD------EHAVTSCTGGLGNGSTG 157
G G Y+ + +D ++ G G
Sbjct: 126 RNQEISGTYQIQAWTKFDFPGRGNTYSSFKWRWYHFDGVDWDESRKLSRIYKFRGIGKAW 185
Query: 158 DN----------FHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVK 207
D + ++D V ++ +W +W NT FR D + +
Sbjct: 186 DWEVDTENGNYDYLMYADLDMDHPEVVTELKSWGKWYVNTTNIDGFRLDAVKHIKFSFFP 245
Query: 208 EYI-----EGARPIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTT 262
+++ + +P+F+VGEYW ++ N+I T + FD
Sbjct: 246 DWLSYVRSQTGKPLFTVGEYW--------------SYDINKLHNYIMKTNGTMSLFDAPL 291
Query: 263 KGILQEAVK-GQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHW-PFPSNHIME 320
A K G + +R +M P+ AVTF+DNHDT QA
Sbjct: 292 HNKFYTASKSGGTFDMRTLMTN--TLMKDQPTLAVTFVDNHDTEPGQALQSWVDPWFKPL 349
Query: 321 GYAYIL-MHPGIPSVFYDHFYDWGD----SIHNQIVKLMDVRR 358
YA+IL G P VFY +Y S+ ++I L+ RR
Sbjct: 350 AYAFILTRQEGYPCVFYGDYYGIPQYNIPSLKSKIDPLLIARR 392
|
| >1hx0_A Alpha amylase (PPA); inhibitor, carbohydrate, pancreas, hydrolase; HET: GLC AC1 BGC MAL; 1.38A {Sus scrofa} SCOP: b.71.1.1 c.1.8.1 PDB: 1wo2_A* 1ua3_A* 1kxq_A 1kxt_A 1kxv_A 1jfh_A* 1vah_A* 1ppi_A* 3l2m_A* 3l2l_A* 1dhk_A* 1ose_A* 1pig_A* 1pif_A* 1bvn_P 3oli_A* 3old_A* 3olg_A* 3ole_A* 3ij8_A* ... Length = 496 | Back alignment and structure |
|---|
Score = 136 bits (343), Expect = 8e-36
Identities = 60/353 (16%), Positives = 106/353 (30%), Gaps = 44/353 (12%)
Query: 24 IRNGREILFQGFNWESCKHDWWRNLERKVPDISKSGFTSVWLPPATHSFAP--------E 75
++GR + F W W + GF V + P + E
Sbjct: 6 TQSGRTSIVHLFEWR-----WVDIALECERYLGPKGFGGVQVSPPNENIVVTNPSRPWWE 60
Query: 76 GYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYN----- 130
Y P + Y L + G+E+ + ++ + VR D VINH G+ G
Sbjct: 61 RYQPVS-YKLCTRSGNENEFRDMVTRCNNVGVRIYVDAVINHMCGSGAAAGTGTTCGSYC 119
Query: 131 -----RYDGIPLS-WDEHAVTSCTGGLGNGSTGD-------NFHGVPNIDHTQHFVRKDI 177
+ +P S WD + T G S D G+ ++ + +VR I
Sbjct: 120 NPGNREFPAVPYSAWDFNDGKCKTASGGIESYNDPYQVRDCQLVGLLDLALEKDYVRSMI 179
Query: 178 IAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGARPIFSVGEYWDSCNYNSHGLDYNQ 237
+L L + +G FR D ++ +K ++ + ++ W
Sbjct: 180 ADYLNKLID-IGVAGFRIDASKHMWPGDIKAVLDK---LHNLNTNWFPAGSRPFIFQEVI 235
Query: 238 DSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKGQFWRLRDAQGKPPGVMGWWPSRAVT 297
D + I + F + K ++ + G RA+
Sbjct: 236 DLGGEAIKSSEYFGNGRVTEFKYGAKLGTVVRKWSG-EKMSYLKNWGEGWGFMPSDRALV 294
Query: 298 FLDNHDTGSTQAHWPFPSNHIMEGYAYILMH-------PGIPSVFYDHFYDWG 343
F+DNHD + Y + G V + +
Sbjct: 295 FVDNHDNQRGHGAGGSSILTFWDARLYKIAVGFMLAHPYGFTRVMSSYRWARN 347
|
| >1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A* Length = 448 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 4e-24
Identities = 51/340 (15%), Positives = 101/340 (29%), Gaps = 53/340 (15%)
Query: 28 REILFQGFNWESCKHDWWRNLERKVPD-ISKSGFTSVWLPPATHSF---APEGYLPQNLY 83
F W W+++ ++ + G+ +V + P Y
Sbjct: 2 PTTFVHLFEWN------WQDVAQECEQYLGPKGYAAVQVSPPNEHITGSQWWTRYQPVSY 55
Query: 84 SLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDG-IPLSWDEH 142
L S G+ ++++ V D +INH + + + P+ +
Sbjct: 56 ELQSRGGNRAQFIDMVNRCSAAGVDIYVDTLINHMAAGSGTGTAGNSFGNKSFPIYSPQD 115
Query: 143 AVTSCTGGLGNGS------TGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFD 196
SCT + G+ ++D ++V+ I A++ L+ +G + FRFD
Sbjct: 116 FHESCTINNSDYGNDRYRVQNCELVGLADLDTASNYVQNTIAAYINDLQA-IGVKGFRFD 174
Query: 197 FARGYSAKYVKEYI-EGARPIFSVGEYWDS-----CNYNSHGLDYNQDSHRQRIINWIDG 250
++ +A ++ + + E D + +
Sbjct: 175 ASKHVAASDIQSLMAKVNGSPVVFQEVIDQGGEAVGASEYLSTGLVTEFKYSTELGNTFR 234
Query: 251 TGQLSAAFDFTTKGILQEAVKGQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAH 310
G L+ +F G+ W S AV F+DNHD
Sbjct: 235 NGSLAWLSNF-----------GEGWGFMP------------SSSAVVFVDNHDNQRGHGG 271
Query: 311 WPFPSNHIME-----GYAYILMHP-GIPSVFYDHFYDWGD 344
++L +P G P V + +
Sbjct: 272 AGNVITFEDGRLYDLANVFMLAYPYGYPKVMSSYDFHGDT 311
|
| >1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A Length = 422 | Back alignment and structure |
|---|
Score = 98.0 bits (244), Expect = 1e-22
Identities = 57/346 (16%), Positives = 105/346 (30%), Gaps = 49/346 (14%)
Query: 45 WRNLERKVPDISKSGFTSVWLPPATHSFAP-----------EGYLPQNLYSLNSSYGSEH 93
+ L+ + DI +G+T++ P Y P + N G+E
Sbjct: 16 FNTLKHNMKDIHDAGYTAIQTSPINQVKEGNQGDKSMSNWYWLYQPTSYQIGNRYLGTEQ 75
Query: 94 LLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGN 153
K + +++ ++ + D VINH TT + N IP +W
Sbjct: 76 EFKEMCAAAEEYGIKVIVDAVINH---TTFDYAAISNEVKSIP-NWTHGNTQIKNWSDRW 131
Query: 154 GSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEY---- 209
T ++ G+ + + V+ + +L N G FRFD A+ Y
Sbjct: 132 DVTQNSLLGLYDWNTQNTQVQSYLKRFLERALND-GADGFRFDAAKHIELPDDGSYGSQF 190
Query: 210 ---IEGARPIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGIL 266
I F GE ++D+ +
Sbjct: 191 WPNITNTSAEFQYGEILQD--------SASRDAAYA----------NYMDVTASNYGHSI 232
Query: 267 QEAVKGQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDT--GSTQAHWPFPSNHIMEGYAY 324
+ A+K + + + + VT++++HDT + + I G+A
Sbjct: 233 RSALKNRNLGVSNIS---HYASDVSADKLVTWVESHDTYANDDEESTWMSDDDIRLGWAV 289
Query: 325 ILMHP-GIPSVFYDHFYDWGDSIHNQIVKLMDVRRQQDIHSRSSIK 369
I P F + G + K R + +I
Sbjct: 290 IASRSGSTPLFFSR--PEGGGNGVRFPGKSQIGDRGSALFEDQAIT 333
|
| >1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 Length = 680 | Back alignment and structure |
|---|
Score = 91.4 bits (227), Expect = 5e-20
Identities = 55/377 (14%), Positives = 117/377 (31%), Gaps = 85/377 (22%)
Query: 59 GFTSVWLPPATHSFAPE-----------GYLPQNLYSLNSSYGSEHLLKALLHKMKQHKV 107
G T++W+ + GY ++ N +G+ + L+ +
Sbjct: 67 GVTAIWISQPVENVFSVMNDASGSASYHGYWARDFKKPNPFFGTLSDFQRLVDAAHAKGI 126
Query: 108 RAMADIVINH------------RVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGS 155
+ + D NH G +G Y + H + L +G
Sbjct: 127 KVIIDFAPNHTSPASETNPSYMENGRLYDNGTLLGGYTNDANMYFHHNGGTTFSSLEDG- 185
Query: 156 TGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYV--------K 207
N + +++H + + + ++ + G R D + K++
Sbjct: 186 IYRNLFDLADLNHQNPVIDRYLKDAVKMWIDM-GIDGIRMD-----AVKHMPFGWQKSLM 239
Query: 208 EYIEGARPIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQ 267
+ I+ RP+F+ GE++ S + D++ + + DF L+
Sbjct: 240 DEIDNYRPVFTFGEWFLS--------ENEVDANNH----YFAN-ESGMSLLDFRFGQKLR 286
Query: 268 EAVKGQFW-------RLRDAQGKPPGVMGWWPSRAVTFLDNHDTG--STQAHWPFPSNHI 318
+ ++ ++D VTF+DNHD P +
Sbjct: 287 QVLRNNSDNWYGFNQMIQDTASAYD-----EVLDQVTFIDNHDMDRFMIDGGDP---RKV 338
Query: 319 MEGYAYILMHPGIPSVFY----------DH-------FYDWGDSIHNQIVKLMDVRRQQD 361
A +L G+P+++Y D ++ + I KL +RR
Sbjct: 339 DMALAVLLTSRGVPNIYYGTEQYMTGNGDPNNRKMMSSFNKNTRAYQVIQKLSSLRRNNP 398
Query: 362 IHSRSSIKILEAQSNLY 378
+ + ++Y
Sbjct: 399 ALAYGDTEQRWINGDVY 415
|
| >2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1 Length = 484 | Back alignment and structure |
|---|
Score = 90.6 bits (225), Expect = 6e-20
Identities = 66/360 (18%), Positives = 118/360 (32%), Gaps = 75/360 (20%)
Query: 45 WRNLERKVPDISKSGFTSVWLPPATHSFAPE--------GYLPQNLYSLNSSYGSEHLLK 96
W+ + + I GFT++W+ P T + GY Q +Y +NS++G+ LK
Sbjct: 42 WQGIIDHLDYIEGMGFTAIWISPITEQLPQDTADGEAYHGYWQQKIYDVNSNFGTADNLK 101
Query: 97 ALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGG-----L 151
+L + + M D+V +H G+ Y+ +D S H T +
Sbjct: 102 SLSDALHARGMYLMVDVVPDHMGYAGNGNDVDYSVFDPFDSSSYFHPYCLITDWDNLTMV 161
Query: 152 GNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYV-KEYI 210
+ GD +P++D T+ VR W+ L + R D S V ++
Sbjct: 162 EDCWEGDTIVSLPDLDTTETAVRTIWYDWVADLVSNYSVDGLRID-----SVLEVQPDFF 216
Query: 211 EG---ARPIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQ 267
G A ++ VGE + N Q L ++ L
Sbjct: 217 PGYNKASGVYCVGEIDNG---NPASDCPYQK--------------VLDGVLNYPIYWQLL 259
Query: 268 EAVKGQ-------FWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTG--STQAHWPFPSNHI 318
A + + ++ P+ F++NHD + +
Sbjct: 260 YAFESSSGSISNLYNMIKSVASDCS-----DPTLLGNFIENHDNPRFAKYTS---DYSQA 311
Query: 319 MEGYAYILMHPGIPSVFY----------DHF---------YDWGDSIHNQIVKLMDVRRQ 359
+YI + GIP V+ + YD ++ I +R+
Sbjct: 312 KNVLSYIFLSDGIPIVYAGEEQHYAGGKVPYNREATWLSGYDTSAELYTWIATTNAIRKL 371
|
| >3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A Length = 601 | Back alignment and structure |
|---|
Score = 89.9 bits (223), Expect = 1e-19
Identities = 60/326 (18%), Positives = 100/326 (30%), Gaps = 55/326 (16%)
Query: 45 WRNLERKVPDISKSGFTSVWLPPATHSFAPE----GYLPQNLYSLNSSYGSEHLLKALLH 100
R + I+ GFT +W P + A GY + Y ++ YGS L
Sbjct: 147 IRGTIDHLDYIAGLGFTQLWPTPLVENDAAAYSYHGYAATDHYRIDPRYGSNEDFVRLST 206
Query: 101 KMKQHKVRAMADIVINHRVGTTQGH--------GGKYNRYD-GIPLSWDEHAVTS---CT 148
+ ++ + + D+V++H + H N +P AV
Sbjct: 207 EARKRGMGLIQDVVLSH---IGKHHWWMKDLPTPDWINYGGKFVPTQHHRVAVQDPYAAQ 263
Query: 149 GGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKE 208
N + G G+P+++ T V +I W G R D ++ E
Sbjct: 264 ADSENFTKGWFVEGMPDLNQTNPLVANYLIQNNIWWIEYAGLSGLRIDTYGYSDGAFLTE 323
Query: 209 Y---IEGARP-IFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKG 264
Y + P + VG+ W + Q N+ T L + DF
Sbjct: 324 YTRRLMAEYPRLNMVGQEWS---TRVPVVARWQRGKA----NFDGYTSHLPSLMDFP--- 373
Query: 265 ILQEAVKGQFWRLRDAQGKPPGVMGW-------WPSRAVTFLDNHDT-------GSTQAH 310
L +A++ + + G P V F NHD G
Sbjct: 374 -LVDAMRNALSKTGEENGLNEVYETLSLDYLYPEPQNLVLFGGNHDMARMFSAAGEDFDR 432
Query: 311 WPFPSNHIMEGYAYILMHPGIPSVFY 336
W +++ P IP +
Sbjct: 433 WRM-------NLVFLMTMPRIPQFYS 451
|
| >1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ... Length = 686 | Back alignment and structure |
|---|
Score = 89.9 bits (223), Expect = 2e-19
Identities = 47/378 (12%), Positives = 112/378 (29%), Gaps = 86/378 (22%)
Query: 59 GFTSVWL-------PPATHSFAPE-----GYLPQNLYSLNSSYGSEHLLKALLHKMKQHK 106
G T++W+ + GY ++ N +YG+ + L+
Sbjct: 70 GVTAIWISQPVENIYSIINYSGVNNTAYHGYWARDFKKTNPAYGTIADFQNLIAAAHAKN 129
Query: 107 VRAMADIVINH------------RVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNG 154
++ + D NH G +G Y + H
Sbjct: 130 IKVIIDFAPNHTSPASSDQPSFAENGRLYDNGTLLGGYTNDTQNLFHHN-GGTDFSTTEN 188
Query: 155 STGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYV-------- 206
N + + +++H V + ++ + G R + + K++
Sbjct: 189 GIYKNLYDLADLNHNNSTVDVYLKDAIKMWLDL-GIDGIRMN-----AVKHMPFGWQKSF 242
Query: 207 KEYIEGARPIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGIL 266
+ +P+F+ G+++ N + ++ + + DF +
Sbjct: 243 MAAVNNYKPVFTFGQWFL--GVNEVSPENHKFA-----------NESGMSLLDFRFAQKV 289
Query: 267 QEAVKGQ---FWRLRDAQGKPPGVMGWWPSRAVTFLDNHDT------GSTQAHWPFPSNH 317
++ + + L+ VTF+DNHD + +
Sbjct: 290 RQVFRDNTDNMYGLKAMLEGSAADYA-QVDDQVTFIDNHDMERFHASNANRRKL------ 342
Query: 318 IMEGYAYILMHPGIPSVFY----------DHF-------YDWGDSIHNQIVKLMDVRRQQ 360
+ A+ L G+P+++Y D + + + I KL +R+
Sbjct: 343 -EQALAFTLTSRGVPAIYYGTEQYMSGGTDPDNRARIPSFSTSTTAYQVIQKLAPLRKCN 401
Query: 361 DIHSRSSIKILEAQSNLY 378
+ S + +++
Sbjct: 402 PAIAYGSTQERWINNDVL 419
|
| >3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A Length = 683 | Back alignment and structure |
|---|
Score = 88.7 bits (220), Expect = 3e-19
Identities = 55/376 (14%), Positives = 121/376 (32%), Gaps = 82/376 (21%)
Query: 59 GFTSVWLPP---ATHSFAPE----------GYLPQNLYSLNSSYGSEHLLKALLHKMKQH 105
G T++W+P ++ P+ GY ++ N +GS + L++ H
Sbjct: 70 GVTAIWIPQPVENIYAVLPDSTFGGSTSYHGYWARDFKRTNPYFGSFTDFQNLINTAHAH 129
Query: 106 KVRAMADIVINH------RVGTTQGHGGKYNRYDGI-----PLSWDEHAVTSCTGGLGNG 154
++ + D NH T +G Y+ + + H
Sbjct: 130 NIKVIIDFAPNHTSPASETDPTYAENGRLYDNGTLLGGYTNDTNGYFHHYGGTDFSSYED 189
Query: 155 STGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYV-------- 206
N + +++ + + + ++ + G R D + K++
Sbjct: 190 GIYRNLFDLADLNQQNSTIDSYLKSAIKVWLDM-GIDGIRLD-----AVKHMPFGWQKNF 243
Query: 207 KEYIEGARPIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGIL 266
+ I RP+F+ GE++ N Y + + DF +
Sbjct: 244 MDSILSYRPVFTFGEWFLGTNEIDVNNTYFAN-------------ESGMSLLDFRFSQKV 290
Query: 267 QEAVKGQ---FWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFPSNHIME--- 320
++ + + L + + VTF+DNHD F +
Sbjct: 291 RQVFRDNTDTMYGLDSMIQSTASDYN-FINDMVTFIDNHDMDR------FYNGGSTRPVE 343
Query: 321 -GYAYILMHPGIPSVFY----------DHF-------YDWGDSIHNQIVKLMDVRRQQDI 362
A+ L G+P+++Y D + ++ + +N I KL +R+
Sbjct: 344 QALAFTLTSRGVPAIYYGTEQYMTGNGDPYNRAMMTSFNTSTTAYNVIKKLAPLRKSNPA 403
Query: 363 HSRSSIKILEAQSNLY 378
+ + + +++Y
Sbjct: 404 IAYGTTQQRWINNDVY 419
|
| >3aie_A Glucosyltransferase-SI; beta-alpha-barrels; HET: MES; 2.10A {Streptococcus mutans} PDB: 3aic_A* 3aib_A* Length = 844 | Back alignment and structure |
|---|
Score = 84.1 bits (207), Expect = 1e-17
Identities = 41/309 (13%), Positives = 77/309 (24%), Gaps = 82/309 (26%)
Query: 120 GTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIA 179
T Y + P + T G G F ++D++ V+ + +
Sbjct: 151 KLTSQANSNYRILNRTPTNQTGKKDPRYTADRTIG--GYEFLLANDVDNSNPVVQAEQLN 208
Query: 180 WLRWLRN---------TVGFQDFRFDFARGYSAKYVKEYIE-------------GARPIF 217
WL +L N F R D A ++ + A
Sbjct: 209 WLHFLMNFGNIYANDPDANFDSIRVDAVDNVDADLLQIAGDYLKAAKGIHKNDKAANDHL 268
Query: 218 SVGEYWDSCNYNSHGLDYNQDSHRQR--IINWIDGTGQLSAAFDFTTKGILQEAVKGQFW 275
S+ E W + + Y D + N + + S A + + +
Sbjct: 269 SILEAW-----SYNDTPYLHDDGDNMINMDNRLRLSLLYSLAKPLNQRSGMNPLITNSLV 323
Query: 276 RLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQA------HWPFPS-------------- 315
D + V + +F+ HD+ P+
Sbjct: 324 NRTDDNAETAAVPSY------SFIRAHDSEVQDLIRDIIKAEINPNVVGYSFTMEEIKKA 377
Query: 316 -----------------NHIMEGYAYILMH-PGIPSVFYDHFYDWGDSIHN-------QI 350
+ YA +L + +P V+Y + I
Sbjct: 378 FEIYNKDLLATEKKYTHYNTALSYALLLTNKSSVPRVYYGDMFTDDGQYMAHKTINYEAI 437
Query: 351 VKLMDVRRQ 359
L+ R +
Sbjct: 438 ETLLKARIK 446
|
| >3aie_A Glucosyltransferase-SI; beta-alpha-barrels; HET: MES; 2.10A {Streptococcus mutans} PDB: 3aic_A* 3aib_A* Length = 844 | Back alignment and structure |
|---|
Score = 83.7 bits (206), Expect = 2e-17
Identities = 21/124 (16%), Positives = 40/124 (32%), Gaps = 18/124 (14%)
Query: 29 EILFQGFNW-----ESCKHDWWRNLERKVPDISKSGFTSVWLPPATHSFAP--------- 74
++F+GF+ + + + V ++ G T + P S
Sbjct: 611 RVMFEGFSNFQAFATKKEEYTNVVIAKNVDKFAEWGVTDFEMAPQYVSSTDGSFLDSVIQ 670
Query: 75 EGYLPQNLY----SLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYN 130
GY + Y S + YG+ L + + ++ MAD V + +
Sbjct: 671 NGYAFTDRYDLGISKPNKYGTADDLVKAIKALHSKGIKVMADWVPDQMYALPEKEVVTAT 730
Query: 131 RYDG 134
R D
Sbjct: 731 RVDK 734
|
| >2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A Length = 478 | Back alignment and structure |
|---|
Score = 83.1 bits (206), Expect = 2e-17
Identities = 68/328 (20%), Positives = 118/328 (35%), Gaps = 76/328 (23%)
Query: 45 WRNLERKVPDISKSGFTSVWLPPATHSFAPE--------GYLPQNLYSLNSSYGSEHLLK 96
W+ + K+ I GFT++W+ P T GY Q++YSLN +YG+ LK
Sbjct: 42 WQGIIDKLDYIQGMGFTAIWITPVTAQLPQTTAYGDAYHGYWQQDIYSLNENYGTADDLK 101
Query: 97 ALLHKMKQHKVRAMADIVINH------------RVGTTQGHGGKYNRYDGIPLSWDEHAV 144
AL + + + M D+V NH V ++ + I D+ V
Sbjct: 102 ALSSALHERGMYLMVDVVANHMGYDGAGSSVDYSVFKPFSSQDYFHPFCFIQNYEDQTQV 161
Query: 145 TSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAK 204
C GDN +P++D T+ V+ + W+ L + R D + K
Sbjct: 162 EDCW-------LGDNTVSLPDLDTTKDVVKNEWYDWVGSLVSNYSIDGLRID-----TVK 209
Query: 205 YV-KEYIEG---ARPIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDF 260
+V K++ G A ++ +GE D + Q+ + ++
Sbjct: 210 HVQKDFWPGYNKAAGVYCIGEVLD---GDPAYTCPYQN--------------VMDGVLNY 252
Query: 261 TTKGILQEAVKGQ-------FWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPF 313
L A K + + + P + TF++NHD F
Sbjct: 253 PIYYPLLNAFKSTSGSMDDLYNMINTVKSDCP-----DSTLLGTFVENHDNPR------F 301
Query: 314 PS-----NHIMEGYAYILMHPGIPSVFY 336
S A+I+++ GIP ++
Sbjct: 302 ASYTNDIALAKNVAAFIILNDGIPIIYA 329
|
| >1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A* Length = 686 | Back alignment and structure |
|---|
Score = 81.8 bits (202), Expect = 6e-17
Identities = 58/399 (14%), Positives = 120/399 (30%), Gaps = 94/399 (23%)
Query: 45 WRNLERKVPDISKSGFTSVWLPP---ATHSFAPE------GYLPQNLYSLNSSYGSEHLL 95
+ +K+P + + G T++WL P + A GY ++ + +G+
Sbjct: 51 LEGVRQKLPYLKQLGVTTIWLSPVLDNLDTLAGTDNTGYHGYWTRDFKQIEEHFGNWTTF 110
Query: 96 KALLHKMKQHKVRAMADIVINH------------RVGTTQGHGGKYNRY-DGIPLSW--- 139
L++ Q+ ++ + D V NH G +G Y D +
Sbjct: 111 DTLVNDAHQNGIKVIVDFVPNHSTPFKANDSTFAEGGALYNNGTYMGNYFDDATKGYFHH 170
Query: 140 --DEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDF 197
D T + ++ + + + L G R D
Sbjct: 171 NGDISNWDDRYEAQWKNFTDPAGFSLADLSQENGTIAQYLTDAAVQLVAH-GADGLRID- 228
Query: 198 ARGYSAKYV--------KEYIEGARPIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWID 249
+ K+ + + + IF VGE++ D +H +++
Sbjct: 229 ----AVKHFNSGFSKSLADKLYQKKDIFLVGEWYGD--------DPGTANHLEKV--RYA 274
Query: 250 GTGQLSAAFDFTTKGILQEAVKGQ-------FWRLRDAQGKPPGVMGWWPSRAVTFLDNH 302
DF +++ + + + +TF+DNH
Sbjct: 275 N-NSGVNVLDFDLNTVIRNVFGTFTQTMYDLNNMVNQTGNEYK-----YKENLITFIDNH 328
Query: 303 DT------GSTQAHWPFPSNHIMEGYAYILMHPGIPSVFY----------DHF------- 339
D S +A+ + A+IL G PS++Y D +
Sbjct: 329 DMSRFLSVNSNKANL-------HQALAFILTSRGTPSIYYGTEQYMAGGNDPYNRGMMPA 381
Query: 340 YDWGDSIHNQIVKLMDVRRQQDIHSRSSIKILEAQSNLY 378
+D + ++ L +RR + +++Y
Sbjct: 382 FDTTTTAFKEVSTLAGLRRNNAAIQYGTTTQRWINNDVY 420
|
| >1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A* Length = 471 | Back alignment and structure |
|---|
Score = 80.6 bits (198), Expect = 1e-16
Identities = 62/351 (17%), Positives = 103/351 (29%), Gaps = 56/351 (15%)
Query: 25 RNGREILFQGFNWESCKHDWWRNLERKVPD-ISKSGFTSVWLPPATHSFAPE-----GYL 78
+GR + F W+ W ++ + + GF V + P +
Sbjct: 7 ASGRNSIVHLFEWK------WNDIADECERFLQPQGFGGVQISPPNEYLVADGRPWWERY 60
Query: 79 PQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRV-GTTQGHGGKYNRYD---- 133
Y +N+ G E + + VR D VINH G G +D
Sbjct: 61 QPVSYIINTRSGDESAFTDMTRRCNDAGVRIYVDAVINHMTGMNGVGTSGSSADHDGMNY 120
Query: 134 -GIPLSWDEHAVTSCTGGLGNGSTGDN--FHGVPNIDHTQHFVRKDIIAWLRWLRNTVGF 190
+P + + N G+ +++ +VR +I ++ + + G
Sbjct: 121 PAVPYGSGDFHSPCEVNNYQDADNVRNCELVGLRDLNQGSDYVRGVLIDYMNHMIDL-GV 179
Query: 191 QDFRFDFARGYSAKYVKEY------------IEGARPIFSVGEYWDSCNYNSHGLDYNQD 238
FR D A+ S + F E D +Y
Sbjct: 180 AGFRVDAAKHMSPGDLSVIFSGLKNLNTDYGFADGARPFIYQEVIDLGGEAISKNEYTGF 239
Query: 239 SHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKGQFWRLRDAQGKPPGVMGWWPSRAVTF 298
+F L A +G L++ P AV F
Sbjct: 240 GC----------------VLEFQFGVSLGNAFQGGNQ-LKNLANWGPEWGLLEGLDAVVF 282
Query: 299 LDNHDT----GSTQAHWPFPSNHIMEGYAYILMHP-GIPSVFYDHFYDWGD 344
+DNHD GS + P + M A++L HP G + + D
Sbjct: 283 VDNHDNQRTGGSQILTYKNPKPYKM-AIAFMLAHPYGTTRIMSSFDFTDND 332
|
| >1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A* Length = 588 | Back alignment and structure |
|---|
Score = 65.9 bits (161), Expect = 9e-12
Identities = 62/372 (16%), Positives = 117/372 (31%), Gaps = 86/372 (23%)
Query: 51 KVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAM 110
+ + G T ++L P S + Y + + ++ +G + LK L+ + + +R M
Sbjct: 181 HLDYLVDLGITGIYLTPIFRSPSNHKYDTADYFEVDPHFGDKETLKTLIDRCHEKGIRVM 240
Query: 111 ADIVINHRVGTT------QGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGV- 163
D V NH G G+ ++Y D + D F V
Sbjct: 241 LDAVFNH-CGYEFAPFQDVWKNGESSKY------KDWFHIHEFPLQTEPRPNYDTFAFVP 293
Query: 164 --PNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKE---YIEGARP-IF 217
P ++ V++ ++ + +R D A ++ +E ++ +P ++
Sbjct: 294 QMPKLNTANPEVKRYLLDVATYWIREFDIDGWRLDVANEIDHEFWREFRQEVKALKPDVY 353
Query: 218 SVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFT-TKGILQEAVKGQFW- 275
+GE W D W+ G Q A ++ T G+L+ K +
Sbjct: 354 ILGEIWH---------DAMP---------WLRG-DQFDAVMNYPFTDGVLRFFAKEEISA 394
Query: 276 -----RLRDAQGKPPGVMGWWPSRAV--TFLDNHDT-------GSTQAHWPFPSNHIMEG 321
++ P L +HDT G
Sbjct: 395 RQFANQMMHVLHSYP-----NNVNEAAFNLLGSHDTSRILTVCGGDIRKVK-------LL 442
Query: 322 YAYILMHPGIPSVFY----------DHF----YDWGDSIHNQ-----IVKLMDVRRQQDI 362
+ + L G P ++Y D W N+ + +L+ +R+Q
Sbjct: 443 FLFQLTFTGSPCIYYGDEIGMTGGNDPECRKCMVWDPMQQNKELHQHVKQLIALRKQYRS 502
Query: 363 HSRSSIKILEAQ 374
R I L A
Sbjct: 503 LRRGEISFLHAD 514
|
| >1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 Length = 583 | Back alignment and structure |
|---|
Score = 65.5 bits (160), Expect = 1e-11
Identities = 63/371 (16%), Positives = 124/371 (33%), Gaps = 79/371 (21%)
Query: 51 KVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAM 110
+ +SK G +V+ P + Y ++ + ++ +G + LK L+ + +R +
Sbjct: 177 HLDHLSKLGVNAVYFTPLFKATTNHKYDTEDYFQIDPQFGDKDTLKKLVDLCHERGIRVL 236
Query: 111 ADIVINHRVGTT---------QGHGGKY---NRYDGIPLSWDEHAVTSCTGGLGNGSTGD 158
D V NH G T G KY +PL + G+ T
Sbjct: 237 LDAVFNH-SGRTFPPFVDVLKNGEKSKYKDWFHIRSLPLEVVD--------GIPTYDTFA 287
Query: 159 NFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKE---YIEGARP 215
+P ++ V++ ++ + G +R D A S ++ +E ++ A P
Sbjct: 288 FEPLMPKLNTEHPDVKEYLLKAAEYWIRETGIDGWRLDVANEVSHQFWREFRRVVKQANP 347
Query: 216 -IFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKGQ- 273
+ +GE W + + W++G Q A ++ + + Q
Sbjct: 348 DAYILGEVWH---------ESSI---------WLEG-DQFDAVMNYPFTNAVLDFFIHQI 388
Query: 274 ------FWRLRDAQGK-PPGVMGWWPSRAVTFLDNHDTG--STQAHWPFPSNHIMEGYAY 324
+ L P LD+HDT TQA + +
Sbjct: 389 ADAEKFSFMLGKQLAGYPRQA----SEVMFNLLDSHDTARLLTQAD--GDKRKMKLAVLF 442
Query: 325 ILMHPGIPSVFY----------DHF----YDWGDSIHNQ-----IVKLMDVRRQQDIHSR 365
+ G P ++Y D +W ++ H++ ++ +R+
Sbjct: 443 QFTYFGTPCIYYGDEVGLDGGHDPGCRKCMEWDETKHDKDLFAFYQTVIRLRQAHAALRT 502
Query: 366 SSIKILEAQSN 376
+ K L A+ N
Sbjct: 503 GTFKFLTAEKN 513
|
| >2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus} Length = 475 | Back alignment and structure |
|---|
Score = 61.9 bits (151), Expect = 1e-10
Identities = 65/373 (17%), Positives = 124/373 (33%), Gaps = 55/373 (14%)
Query: 48 LERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKV 107
+ K+P + G +++L P S A Y + + ++ G L+ LL H V
Sbjct: 52 VAEKLPYLLDLGVEAIYLNPVFASTANHRYHTVDYFQVDPILGGNEALRHLLEVAHAHGV 111
Query: 108 RAMADIVINH---------RVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGD 158
R + D V NH + + Y + + T N
Sbjct: 112 RVILDGVFNHTGRGFFAFQHLMENGEQSPYRDWY-----HVKGFPLKAYTAH-PNYEAWW 165
Query: 159 NFHGVPNIDHTQHFVRKDIIAWLR-WLRNTVGFQDFRFDFARGYS----AKYVKEYIEGA 213
+P + VR+ ++A W+R G +R D + ++ ++GA
Sbjct: 166 GNPELPKLKVETPAVREYLLAVAEHWIR--FGVDGWRLDVPNEIPDPTFWREFRQRVKGA 223
Query: 214 RP-IFSVGEYWDSCNY--NSHGLDYNQDSH-RQRIINWIDGTGQLSAAFDFTTKGILQEA 269
P + VGE W+ ++ D + + ++ ++ G T G ++
Sbjct: 224 NPEAYIVGEIWEEADFWLQGDMFDAVMNYPLARAVLGFVGGEALDRDLAAQTGLGRIEPL 283
Query: 270 VKGQFW-RLRDAQGK-PPGVMGWWPSRAVTFLDNHDTG--STQAHWPFPSNHIMEGYAYI 325
F RL D G+ P V + L +HDT + A +
Sbjct: 284 QALAFSHRLEDLFGRYRPEV----VRAQMNLLTSHDTPRLLSLMRGSV--ERARLALALL 337
Query: 326 LMHPGIPSVFY----------DHF----YDWGDSIHNQ-----IVKLMDVRRQQDIHSRS 366
+ PG P+V+Y D W ++ + + +L +R++ +
Sbjct: 338 FLLPGNPTVYYGEEVGMAGGKDPENRGGMVWEEARWQKDLRETVKRLARLRKEHPALRTA 397
Query: 367 SIKILEAQSNLYS 379
+ AQ +
Sbjct: 398 PYLRIYAQDGHLA 410
|
| >2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A Length = 488 | Back alignment and structure |
|---|
Score = 61.6 bits (150), Expect = 2e-10
Identities = 61/371 (16%), Positives = 111/371 (29%), Gaps = 56/371 (15%)
Query: 51 KVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAM 110
+ I G +++ P S + Y + Y ++ G K LL Q ++ +
Sbjct: 61 DLDYIQNLGINAIYFTPIFQSASNHRYHTHDYYQVDPMLGGNEAFKELLDAAHQRNIKVV 120
Query: 111 ADIVINHRVGTT------QGHGGKYNRYDGIPLSW----DEHAVTSCTGGLGNGSTGDNF 160
D V NH G ++ + ++W N
Sbjct: 121 LDGVFNH-SSRGFFFFHDVLENGPHSPW----VNWFKIEGWPLSPYNGEFPANYVGWAGN 175
Query: 161 HGVPNIDHTQHFVRKDIIAWLR-WLRNTVGFQDFRFDFARGYSA----KYVKEYIEGARP 215
+P +H VR+ I+ WL+ G +R D + ++ + P
Sbjct: 176 RALPEFNHDNPEVREYIMEIAEYWLK--FGIDGWRLDVPFEIKTPGFWQEFRDRTKAINP 233
Query: 216 -IFSVGEYWDSCNY--NSHGLDYNQDSH-RQRIINWIDGTGQLSAAFDFTTKGILQEAVK 271
+ VGE W + D + I + G +
Sbjct: 234 EAYIVGEVWGDSRQWLDGTQFDGVMNYLFAGPTIAFAAGDRVVLEQVQSRDYQPYPPLFA 293
Query: 272 GQFW-RLRDAQGKPPGVMGWWPSRAV--TFLDNHDTG--STQAHWPFPSNHIMEGYAYIL 326
++ ++++ P W + L +HDT T A + +L
Sbjct: 294 AEYATKIQEVLQLYP-----WEIQLTQLNLLASHDTARLMTIAGGDI--ASVELSTLLLL 346
Query: 327 MHPGIPSVFY----------DHFY--------DWGDSIHNQIVKLMDVRRQQDIHSRSSI 368
PG PS++Y D +W I N +L+ +R+
Sbjct: 347 TFPGAPSIYYGDEVGLPGGIDPDSRRGFPLEANWNQEIFNTHRQLITIRQTYPALRTGDY 406
Query: 369 KILEAQSNLYS 379
++L AQ LY
Sbjct: 407 QVLYAQGQLYL 417
|
| >1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A Length = 585 | Back alignment and structure |
|---|
Score = 61.6 bits (150), Expect = 2e-10
Identities = 55/367 (14%), Positives = 121/367 (32%), Gaps = 78/367 (21%)
Query: 51 KVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAM 110
++P + + G T+++ P S + Y + +++ +G + L+ + + ++ +
Sbjct: 178 RLPYLEELGVTALYFTPIFASPSHHKYDTADYLAIDPQFGDLPTFRRLVDEAHRRGIKII 237
Query: 111 ADIVINHRVGTT---------QGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFH 161
D V NH G +G +Y + ++ V+ T +
Sbjct: 238 LDAVFNH-AGDQFFAFRDVLQKGEQSRYKDW----FFIEDFPVSK-TSRTNYETFAVQVP 291
Query: 162 GVPNIDHTQHFVRKDIIAWLR-WLRNTVGFQD-FRFDFARGYSAKYVKE---YIEGARP- 215
+P + V++ + R W+ + D +R D A + +E ++ P
Sbjct: 292 AMPKLRTENPEVKEYLFDVARFWMEQGI---DGWRLDVANEVDHAFWREFRRLVKSLNPD 348
Query: 216 IFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFT-TKGILQEAVKGQF 274
VGE W D + W+ G Q + ++ + +++ G+
Sbjct: 349 ALIVGEIWH---------DAS---------GWLMG-DQFDSVMNYLFRESVIRFFATGEI 389
Query: 275 W------RLRDAQGK-PPGVMGWWPSRAVTFLDNHDTG--STQAHWPFPSNHIMEGYAYI 325
L A+ P LD+HDT T +
Sbjct: 390 HAERFDAELTRARMLYPEQA----AQGLWNLLDSHDTERFLTSCG--GNEAKFRLAVLFQ 443
Query: 326 LMHPGIPSVFY----------DHF----YDWGDSIHNQ-----IVKLMDVRRQQDIHSRS 366
+ + G P ++Y D W + N+ +L+ +R + +R
Sbjct: 444 MTYLGTPLIYYGDEIGMAGATDPDCLRPMIWEEKEQNRGLFEFYKELIRLRHRLASLTRG 503
Query: 367 SIKILEA 373
+++ A
Sbjct: 504 NVRSWHA 510
|
| >3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} Length = 449 | Back alignment and structure |
|---|
Score = 59.7 bits (145), Expect = 6e-10
Identities = 54/316 (17%), Positives = 98/316 (31%), Gaps = 64/316 (20%)
Query: 48 LERKVPDISKSGFTSVWLPP-----ATHSFAPE--GYLPQNLYSLNSSYGSEHLLKALLH 100
+ + I G +WL P + Y ++ +N YG+ KAL
Sbjct: 32 VTADLQRIKDLGTDILWLLPINPIGEVNRKGTLGSPYAIKDYRGINPEYGTLADFKALTD 91
Query: 101 KMKQHKVRAMADIVINHRVGTTQGH-------GGKYNRYDGIPLSWDEHAVTSCTGGLGN 153
+ + ++ M DIV NH T+ Y+ DG
Sbjct: 92 RAHELGMKVMLDIVYNH---TSPDSVLATEHPEWFYHDADGQL----------------- 131
Query: 154 GSTGDNFHGVPNIDHTQHFVRKDIIAWLR-WLRNTVGFQDFRFDFARGYSAKYVKEYIEG 212
+ ++ V ++D+ H + + I L W + G+ R D A + E +
Sbjct: 132 TNKVGDWSDVKDLDYGHHELWQYQIDTLLYWSQFVDGY---RCDVAPLVPLDFWLEARKQ 188
Query: 213 ARPI----FSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQE 268
+ E S + ++ Q D +L AFD T +
Sbjct: 189 VNAKYPETLWLAESAGS--------GFIEELRSQGYTGLSDS--ELYQAFDMTYDYDVFG 238
Query: 269 AVKGQFWRLRDAQGKPPGVMGWW------PSRAVTFLDNHDTGS--TQAHWPFPSNHIME 320
K + + + ++ + FL+NHD + H +
Sbjct: 239 DFKDYWQGRSTVE-RYVDLLQRQDATFPGNYVKMRFLENHDNARMMSLMH---SKAEAVN 294
Query: 321 GYAYILMHPGIPSVFY 336
+I M GIP ++
Sbjct: 295 NLTWIFMQRGIPLIYN 310
|
| >3ttq_A Dextransucrase; (beta/alpha)8 barrel, transferase; HET: PG4; 1.90A {Leuconostoc mesenteroides} PDB: 3tto_A* Length = 1108 | Back alignment and structure |
|---|
Score = 60.1 bits (145), Expect = 7e-10
Identities = 38/256 (14%), Positives = 72/256 (28%), Gaps = 64/256 (25%)
Query: 2 DYTSKGFDETNQQTDLVKIRAVIRNGREILFQGFNW---ESCKHD--WWRNLERKVPDIS 56
D + N ++ A + + ++++GF+ ++ HD + + +
Sbjct: 806 DARTAATTTENHDGKVLHSNAALDSN--LIYEGFSNFQPKATTHDELTNVVIAKNADVFN 863
Query: 57 KSGFTSVWLPPATHSFAP---------EGYLPQNLYSLNSS----YGSEHLLKALLHKMK 103
G TS + P S GY + Y L + YG++ L+A + +
Sbjct: 864 NWGITSFEMAPQYRSSGDHTFLDSTIDNGYAFTDRYDLGFNTPTKYGTDGDLRATIQALH 923
Query: 104 QHKVRAMADIVINHRVG-----------------------------TTQGHGGKYNRYDG 134
++ MAD+V N T GG+Y
Sbjct: 924 HANMQVMADVVDNQVYNLPGKEVVSATRAGVYGNDDATGFGTQLYVTNSVGGGQYQEKYA 983
Query: 135 IPLSWDEHAVTSCTGGLGNGSTGDNFHGVP------------NIDHTQHFVRKDIIAWLR 182
+ E A+ + L G D ++ + D I W
Sbjct: 984 G--QYLE-ALKAKYPDLFEGKAYDYWYKNYANDGSNPYYTLSHGDRESIPADVAIKQWSA 1040
Query: 183 WLRNTVGFQDFRFDFA 198
N +
Sbjct: 1041 KYMNGTNVLGNGMGYV 1056
|
| >3ttq_A Dextransucrase; (beta/alpha)8 barrel, transferase; HET: PG4; 1.90A {Leuconostoc mesenteroides} PDB: 3tto_A* Length = 1108 | Back alignment and structure |
|---|
Score = 49.7 bits (118), Expect = 1e-06
Identities = 35/302 (11%), Positives = 73/302 (24%), Gaps = 76/302 (25%)
Query: 120 GTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIA 179
QG KY P + ++ +F ++D++ V+ + +
Sbjct: 377 AWFQGGYLKYGNNPLTPTTNSDYR---------QPGNAFDFLLANDVDNSNPVVQAENLN 427
Query: 180 WLRWLRN---------TVGFQDFRFDFARGYSAKYVKEYIEGARPIFSVGEYWDSCN--- 227
WL +L N F R D ++ + R + V + N
Sbjct: 428 WLHYLMNFGTITAGQDDANFDSIRIDAVDFIHNDTIQRTYDYLRDAYQVQQSEAKANQHI 487
Query: 228 -------YNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKGQFWRLRDA 280
+N + + + +LQ+ G
Sbjct: 488 SLVEAGLDAGTSTIHNDALIESNLREAATLSLTNEPGKNKPLTNMLQDVDGGTLITDHTQ 547
Query: 281 QGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFPSNHIMEG------------------- 321
+ + + HD G + ++
Sbjct: 548 NSTENQ-----ATPNYSIIHAHDKGVQEKVGAAITDATGADWTNFTDEQLKAGLELFYKD 602
Query: 322 ----------------YAYILMHP-GIPSVFYDHFYDWGD-------SIHNQIVKLMDVR 357
YA +L + +P ++Y Y ++ +V LM R
Sbjct: 603 QRATNKKYNSYNIPSIYALMLTNKDTVPRMYYGDMYQDDGQYMANKSIYYDALVSLMTAR 662
Query: 358 RQ 359
+
Sbjct: 663 KS 664
|
| >1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A Length = 637 | Back alignment and structure |
|---|
Score = 57.1 bits (138), Expect = 6e-09
Identities = 56/381 (14%), Positives = 118/381 (30%), Gaps = 84/381 (22%)
Query: 59 GFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQH----KVRAMADIV 114
G ++L P + Y Q+ +++ ++G L+ L++ + K + D V
Sbjct: 205 GANILYLNPIFKAPTNHKYDTQDYMAVDPAFGDNSTLQTLINDIHSTANGPKGYLILDGV 264
Query: 115 INHRVGTTQGHGGKYNRYDGIPLSWDEHAVT----SCTGGLGNGSTGDNFHGVPNIDH-- 168
NH G + KYN + + + + + ++ F+ +P +++
Sbjct: 265 FNH-TGDSHPWFDKYNNFSSQGAYESQSSPWYNYYTFYTWPDSYASFLGFNSLPKLNYGN 323
Query: 169 ----TQHFVRKDIIAWLR-WLRNTVGFQDFRFD-----------FARGYSAKYVKE---Y 209
+ + + + + +L +R D + + + E
Sbjct: 324 SGSAVRGVIYNNSNSVAKTYLNPPYSVDGWRLDAAQYVDANGNNGSDVTNHQIWSEFRNA 383
Query: 210 IEGARP-IFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTT-KGILQ 267
++G +GEYW + N W Q AA +F +
Sbjct: 384 VKGVNSNAAIIGEYWGNAN------------------PWTAQGNQWDAATNFDGFTQPVS 425
Query: 268 EAVKGQFWRLRDAQGKPPGVMGWW-----------PSRAVTFLDNHDTG--STQAHWPFP 314
E + G+ ++ A W + FL NHD +T++
Sbjct: 426 EWITGKDYQNNSASISTTQFDSWLRGTRANYPTNVQQSMMNFLSNHDITRFATRSG--GD 483
Query: 315 SNHIMEGYAYILMHPGIPSVFY----------DHF----YDWGDSIHNQ-----IVKLMD 355
+ + + G P+++Y D +DW + + KL+
Sbjct: 484 LWKTYLALIFQMTYVGTPTIYYGDEYGMQGGADPDNRRSFDWSQATPSNSAVALTQKLIT 543
Query: 356 VRRQQDIHSRSSIKILEAQSN 376
+R Q S L
Sbjct: 544 IRNQYPALRTGSFMTLITDDT 564
|
| >3klk_A Glucansucrase; native form, open conformation, multidomain protein, glycosyltransferase, transferase; 1.65A {Lactobacillus reuteri} PDB: 3kll_A* 3hz3_A* Length = 1039 | Back alignment and structure |
|---|
Score = 56.3 bits (135), Expect = 1e-08
Identities = 25/137 (18%), Positives = 49/137 (35%), Gaps = 20/137 (14%)
Query: 2 DYTSKGFDETNQQTDLVKIRAVIRNGREILFQGFNW-----ESCKHDWWRNLERKVPDIS 56
D + DE + + A + + ++++GF+ + + +
Sbjct: 639 DARTAPSDEAHTTKTAYRSNAALDS--NVIYEGFSNFIYWPTTESERTNVRIAQNADLFK 696
Query: 57 KSGFTSVWLPPATHSFAP---------EGYLPQNLYSLNSS----YGSEHLLKALLHKMK 103
G T+ L P +S GY + Y L S YGS+ L+ L +
Sbjct: 697 SWGITTFELAPQYNSSKDGTFLDSIIDNGYAFTDRYDLGMSTPNKYGSDEDLRNALQALH 756
Query: 104 QHKVRAMADIVINHRVG 120
+ ++A+AD V +
Sbjct: 757 KAGLQAIADWVPDQIYN 773
|
| >3klk_A Glucansucrase; native form, open conformation, multidomain protein, glycosyltransferase, transferase; 1.65A {Lactobacillus reuteri} PDB: 3kll_A* 3hz3_A* Length = 1039 | Back alignment and structure |
|---|
Score = 48.6 bits (115), Expect = 3e-06
Identities = 31/268 (11%), Positives = 63/268 (23%), Gaps = 90/268 (33%)
Query: 165 NIDHTQHFVRKDIIAWLRWLRN---------TVGFQDFRFDFARGYSAKYVKEYIE---- 211
+ID++ V+ + + WL +L N F R D + +
Sbjct: 246 DIDNSNPVVQAEELNWLYYLMNFGTITGNNPEANFDGIRVDAVDNVDVDLLSIARDYFNA 305
Query: 212 ---------GARPIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTT 262
A ++ E W Y G D
Sbjct: 306 AYNMEQSDASANKHINILEDW-----GWDDPAYVNK------------IGNPQLTMDDRL 348
Query: 263 KGILQEAV---KGQFWRLRDAQ-----GKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFP 314
+ + + + + L + + F+ HD+ +
Sbjct: 349 RNAIMDTLSGAPDKNQALNKLITQSLVNRANDNTENAVIPSYNFVRAHDSNAQDQIRQAI 408
Query: 315 SNHIMEG-----------------------------------YAYILMHP-GIPSVFY-D 337
+ Y +L + +P V+Y D
Sbjct: 409 QAATGKPYGEFNLDDEKKGMEAYINDQNSTNKKWNLYNMPSAYTILLTNKDSVPRVYYGD 468
Query: 338 HFYDWGDSIHNQ------IVKLMDVRRQ 359
+ D G + ++ I L+ R +
Sbjct: 469 LYQDGGQYMEHKTRYFDTITNLLKTRVK 496
|
| >4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus} Length = 696 | Back alignment and structure |
|---|
Score = 55.9 bits (135), Expect = 1e-08
Identities = 54/381 (14%), Positives = 108/381 (28%), Gaps = 88/381 (23%)
Query: 59 GFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHR 118
G +++L P S + Y + S++ G+ + L+ + K++ + DI ++H
Sbjct: 278 GVETIYLTPIFSSTSYHRYDTIDYKSIDKYLGTMEDFEKLVQVLHSRKIKIVLDITMHH- 336
Query: 119 VGTT---------QGHGGKY-----------------NRYDGIPLSWDEHAVTSCTGGLG 152
+G Y +
Sbjct: 337 TNPCNELFVKALREGENSPYWEMFSFLSPPPKEIVELMLKYIDGEECRSRELYKLDYFRN 396
Query: 153 NGSTGDNFHGV---PNIDHTQHFVRKDIIAWLR-WLRNTVGFQD-FRFDFARGYSAKYVK 207
N + F + +H I + W+ + D FR D A G ++K
Sbjct: 397 NKPFYEAFFNIWLMAKFNHDNPRTVDYFIDITKFWIDKGI---DGFRIDVAMGIHYSWMK 453
Query: 208 E---YIEGARP-IFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTK 263
+ YI+ P +GE ++ ++D +A ++ +
Sbjct: 454 QYYEYIKNTYPDFLVLGELAENPR------------------IYMD---YFDSAMNYYLR 492
Query: 264 GILQEAVKGQFWRLRDAQGKPPGVMGWWPSRA----VTFLDNHDTG--STQAHWPFPSNH 317
+ E + + L + + V + P L +HD + +
Sbjct: 493 KAILELLIYKRIDLNEFISRINNVYAYIPHYKALSLYNMLGSHDVPRIKSMVQ---NNKL 549
Query: 318 IMEGYAYILMHPGIPSVFY----------DHF----YDWGDSIHNQ-----IVKLMDVRR 358
+ Y I PG P ++Y D W + I KL+ + +
Sbjct: 550 LKLMYVLIFALPGSPVIYYGDEIGLEGGRDPDNRRPMIWDRGNWDLELYEHIKKLIRIYK 609
Query: 359 QQDIHSRSSIKILEAQSNLYS 379
+ SNL
Sbjct: 610 SCRSMRHGYFLVENLGSNLLF 630
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 51.4 bits (122), Expect = 5e-07
Identities = 38/241 (15%), Positives = 61/241 (25%), Gaps = 88/241 (36%)
Query: 170 QHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGARPIFSVGEYWDSCNYN 229
+ KDI+ F F + K V++ + I S E
Sbjct: 14 HQYQYKDIL------------SVFEDAFVDNFDCKDVQDMP---KSILSKEEI------- 51
Query: 230 SHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKGQFWRLRDAQGKPPGVMG 289
H + + FW L Q
Sbjct: 52 DHIIMSKDAVSGTLRL----------------------------FWTLLSKQ-------- 75
Query: 290 WWPSRAV-TFLDNHDTGSTQAHWPFPSNHIMEGYAYILMHPGIPSVFYDHFYD--WGDSI 346
V F++ + ++ F +M P + + Y D + D
Sbjct: 76 ---EEMVQKFVE----EVLRINYKF----LMSPIKTEQRQPSMMTRMYIEQRDRLYND-- 122
Query: 347 HNQIVKLMDVRRQQDIHSRSSIKILEAQSNLYSAIIGDKVCMKIGDGSWCPAGKEWTLAT 406
NQ+ +V R Q +LE + I G + GS GK W +A
Sbjct: 123 -NQVFAKYNVSRLQPYLKLRQ-ALLELRPAKNVLIDG----VL---GS----GKTW-VAL 168
Query: 407 S 407
Sbjct: 169 D 169
|
| >3ucq_A Amylosucrase; thermostability, amylose synthesis, sucrose isomerization, beta/alpha-barrel, carbohydrate binding, transferase; 1.97A {Deinococcus geothermalis} PDB: 3uer_A* Length = 655 | Back alignment and structure |
|---|
Score = 42.6 bits (100), Expect = 2e-04
Identities = 16/75 (21%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
Query: 46 RNLERKVPDISKSGFTSVWLPPATHSFAPE---GYLPQNLYSLNSSYGSEHLLKALLHKM 102
+ +E ++ + G + L P E GY Q+ ++ G+ L AL +
Sbjct: 111 KGVEERLDYLEGLGVKYLHLMPLLRPREGENDGGYAVQDYRAVRPDLGTMDDLSALARAL 170
Query: 103 KQHKVRAMADIVINH 117
+ + + D+V+NH
Sbjct: 171 RGRGISLVLDLVLNH 185
|
| >1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A* Length = 628 | Back alignment and structure |
|---|
Score = 42.5 bits (100), Expect = 2e-04
Identities = 16/75 (21%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Query: 46 RNLERKVPDISKSGFTSVWLPP---ATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKM 102
+ L+ K+P + G T + L P + GY + +N + G+ L+ ++ +
Sbjct: 113 KGLKDKIPYFQELGLTYLHLMPLFKCPEGKSDGGYAVSSYRDVNPALGTIGDLREVIAAL 172
Query: 103 KQHKVRAMADIVINH 117
+ + A+ D + NH
Sbjct: 173 HEAGISAVVDFIFNH 187
|
| >3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A Length = 644 | Back alignment and structure |
|---|
Score = 42.2 bits (99), Expect = 3e-04
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Query: 46 RNLERKVPDISKSGFTSVWLPP---ATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKM 102
+ + +VP + + G + L P A G+ + + S GS L AL ++
Sbjct: 106 QGVAERVPYLQELGVRYLHLLPFLRARAGDNDGGFAVSDYGQVEPSLGSNDDLVALTSRL 165
Query: 103 KQHKVRAMADIVINH 117
++ + AD V+NH
Sbjct: 166 REAGISLCADFVLNH 180
|
| >1r7a_A Sucrose phosphorylase; beta-alpha-barrels, dimer, glycoside hydrolase, transferase; 1.77A {Bifidobacterium adolescentis} SCOP: b.71.1.1 c.1.8.1 PDB: 2gdv_A* 2gdu_A* Length = 504 | Back alignment and structure |
|---|
Score = 41.7 bits (98), Expect = 3e-04
Identities = 13/77 (16%), Positives = 26/77 (33%), Gaps = 13/77 (16%)
Query: 46 RNLERKVPDISKSGFTSVWLPPATHSFAPE-----GYLPQNLYSLNSSYGSEHLLKALLH 100
+++ + + V + P F P G+ P + ++ GS + L
Sbjct: 20 KSMTDILRTRFDGVYDGVHILP---FFTPFDGADAGFDPIDHTKVDERLGSWDDVAELSK 76
Query: 101 KMKQHKVRAMADIVINH 117
M D ++NH
Sbjct: 77 TH-----NIMVDAIVNH 88
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 416 | |||
| 1ht6_A | 405 | AMY1, alpha-amylase isozyme 1; barley, beta-alpha- | 100.0 | |
| 1gcy_A | 527 | Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-b | 100.0 | |
| 2wc7_A | 488 | Alpha amylase, catalytic region; CD/PUL-hydrolyzin | 100.0 | |
| 1lwj_A | 441 | 4-alpha-glucanotransferase; alpha-amylase family, | 100.0 | |
| 1wza_A | 488 | Alpha-amylase A; hydrolase, halophilic, thermophil | 100.0 | |
| 3edf_A | 601 | FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin c | 100.0 | |
| 2z1k_A | 475 | (NEO)pullulanase; hydrolase, structural genomics, | 100.0 | |
| 4aef_A | 645 | Neopullulanase (alpha-amylase II); hydrolase, ther | 100.0 | |
| 1ud2_A | 480 | Amylase, alpha-amylase; calcium-free, alkaline, hy | 100.0 | |
| 3bh4_A | 483 | Alpha-amylase; calcium, carbohydrate metabolism, g | 100.0 | |
| 1hvx_A | 515 | Alpha-amylase; hydrolase, glycosyltransferase, the | 100.0 | |
| 1wpc_A | 485 | Glucan 1,4-alpha-maltohexaosidase; maltohexaose-pr | 100.0 | |
| 1mxg_A | 435 | Alpha amylase; hyperthermostable, family 13 glycos | 100.0 | |
| 1j0h_A | 588 | Neopullulanase; beta-alpha-barrels, hydrolase; 1.9 | 100.0 | |
| 1ea9_C | 583 | Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A | 100.0 | |
| 2aaa_A | 484 | Alpha-amylase; glycosidase; 2.10A {Aspergillus nig | 100.0 | |
| 4aee_A | 696 | Alpha amylase, catalytic region; hydrolase, hypert | 100.0 | |
| 1wzl_A | 585 | Alpha-amylase II; pullulan, GH-13, alpha-amylase f | 100.0 | |
| 3dhu_A | 449 | Alpha-amylase; structural genomics, hydrolase, gly | 100.0 | |
| 1jae_A | 471 | Alpha-amylase; glycosidase, carbohydrate metabolis | 100.0 | |
| 2guy_A | 478 | Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; | 100.0 | |
| 1g94_A | 448 | Alpha-amylase; beta-alpha-8-barrel, 3 domain struc | 100.0 | |
| 1cyg_A | 680 | Cyclodextrin glucanotransferase; glycosyltransfera | 100.0 | |
| 2zic_A | 543 | Dextran glucosidase; TIM barrel, (beta/alpha)8-bar | 100.0 | |
| 4aie_A | 549 | Glucan 1,6-alpha-glucosidase; hydrolase, glycoside | 100.0 | |
| 3bmv_A | 683 | Cyclomaltodextrin glucanotransferase; glycosidase, | 100.0 | |
| 3bc9_A | 599 | AMYB, alpha amylase, catalytic region; acarbose, t | 100.0 | |
| 1m53_A | 570 | Isomaltulose synthase; klebsiella SP. LX3, sucrose | 100.0 | |
| 1d3c_A | 686 | Cyclodextrin glycosyltransferase; alpha-amylase, p | 100.0 | |
| 1uok_A | 558 | Oligo-1,6-glucosidase; sugar degradation, hydrolas | 100.0 | |
| 1qho_A | 686 | Alpha-amylase; glycoside hydrolase, starch degrada | 100.0 | |
| 3k8k_A | 669 | Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, bet | 100.0 | |
| 1zja_A | 557 | Trehalulose synthase; sucrose isomerase, alpha-amy | 100.0 | |
| 1ji1_A | 637 | Alpha-amylase I; beta/alpha barrel, hydrolase; 1.6 | 100.0 | |
| 2ze0_A | 555 | Alpha-glucosidase; TIM barrel, glucoside hydrolase | 100.0 | |
| 3aj7_A | 589 | Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydro | 100.0 | |
| 1g5a_A | 628 | Amylosucrase; glycosyltransferase, glycoside hydro | 100.0 | |
| 3czg_A | 644 | Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; | 100.0 | |
| 1ua7_A | 422 | Alpha-amylase; beta-alpha-barrels, acarbose, greek | 100.0 | |
| 3ucq_A | 655 | Amylosucrase; thermostability, amylose synthesis, | 100.0 | |
| 2bhu_A | 602 | Maltooligosyltrehalose trehalohydrolase; alpha-amy | 100.0 | |
| 2e8y_A | 718 | AMYX protein, pullulanase; multiple domain, beta-a | 100.0 | |
| 3zss_A | 695 | Putative glucanohydrolase PEP1A; alpha-glucan bios | 100.0 | |
| 4gqr_A | 496 | Pancreatic alpha-amylase; glycosyl hydrolase, diab | 100.0 | |
| 1r7a_A | 504 | Sucrose phosphorylase; beta-alpha-barrels, dimer, | 100.0 | |
| 1m7x_A | 617 | 1,4-alpha-glucan branching enzyme; alpha/beta barr | 100.0 | |
| 3m07_A | 618 | Putative alpha amylase; IDP00968, csgid, structura | 100.0 | |
| 1bf2_A | 750 | Isoamylase; hydrolase, glycosidase, debranching en | 100.0 | |
| 1gjw_A | 637 | Maltodextrin glycosyltransferase; alpha-amylase, m | 100.0 | |
| 3vgf_A | 558 | Malto-oligosyltrehalose trehalohydrolase; alpha/be | 100.0 | |
| 2vr5_A | 718 | Glycogen operon protein GLGX; hydrolase, glycosida | 100.0 | |
| 2wan_A | 921 | Pullulanase; hydrolase, glycoside hydrolase, polys | 100.0 | |
| 2wsk_A | 657 | Glycogen debranching enzyme; carbohydrate metaboli | 100.0 | |
| 2dh2_A | 424 | 4F2 cell-surface antigen heavy chain; TIM-barrel, | 100.0 | |
| 3k1d_A | 722 | 1,4-alpha-glucan-branching enzyme; mycobacterium t | 100.0 | |
| 3aml_A | 755 | OS06G0726400 protein; starch-branching, transferas | 100.0 | |
| 2ya0_A | 714 | Putative alkaline amylopullulanase; hydrolase, gly | 100.0 | |
| 3faw_A | 877 | Reticulocyte binding protein; TIM barrel, beta bar | 100.0 | |
| 2ya1_A | 1014 | Putative alkaline amylopullulanase; hydrolase, gly | 100.0 | |
| 2fhf_A | 1083 | Pullulanase; multiple domain, beta-alpha-barrel, a | 100.0 | |
| 4aio_A | 884 | Limit dextrinase; hydrolase, pullulanase, glycosid | 100.0 | |
| 1iv8_A | 720 | Maltooligosyl trehalose synthase; beta alpha barre | 100.0 | |
| 3hje_A | 704 | 704AA long hypothetical glycosyltransferase; treha | 100.0 | |
| 3aie_A | 844 | Glucosyltransferase-SI; beta-alpha-barrels; HET: M | 99.97 | |
| 3klk_A | 1039 | Glucansucrase; native form, open conformation, mul | 99.96 | |
| 3ttq_A | 1108 | Dextransucrase; (beta/alpha)8 barrel, transferase; | 99.9 | |
| 3aie_A | 844 | Glucosyltransferase-SI; beta-alpha-barrels; HET: M | 99.88 | |
| 3klk_A | 1039 | Glucansucrase; native form, open conformation, mul | 99.88 | |
| 3ttq_A | 1108 | Dextransucrase; (beta/alpha)8 barrel, transferase; | 99.71 | |
| 2yfo_A | 720 | Alpha-galactosidase-sucrose kinase agask; hydrolas | 98.89 | |
| 3mi6_A | 745 | Alpha-galactosidase; NESG, structural genomics, PS | 98.77 | |
| 2xn2_A | 732 | Alpha-galactosidase; hydrolase, glycosidase; HET: | 98.71 | |
| 4fnq_A | 729 | Alpha-galactosidase AGAB; glycoside hydrolase, hyd | 98.17 | |
| 1zy9_A | 564 | Alpha-galactosidase; TM1192, struc genomics, joint | 97.69 | |
| 1qnr_A | 344 | Endo-1,4-B-D-mannanase; hydrolase, anomalous scatt | 97.59 | |
| 3lpp_A | 898 | Sucrase-isomaltase; glycoside hydrolase family 31, | 96.96 | |
| 3vmn_A | 643 | Dextranase; TIM barrel, immunoglobrin fold, greek- | 96.67 | |
| 3l4y_A | 875 | Maltase-glucoamylase, intestinal; glycoside hydrol | 96.62 | |
| 2f2h_A | 773 | Putative family 31 glucosidase YICI; BETA8alpha8 b | 96.29 | |
| 1hjs_A | 332 | Beta-1,4-galactanase; 4-galactanases, family 53 gl | 95.85 | |
| 2g3m_A | 693 | Maltase, alpha-glucosidase; hydrolase, glycoside h | 95.81 | |
| 3vup_A | 351 | Beta-1,4-mannanase; TIM barrel, digestive fluid, H | 95.74 | |
| 4ba0_A | 817 | Alpha-glucosidase, putative, ADG31B; hydrolase; HE | 95.74 | |
| 2p0o_A | 372 | Hypothetical protein DUF871; structural genomics, | 95.54 | |
| 1fob_A | 334 | Beta-1,4-galactanase; B/A barrel, glycosyl hydrola | 95.53 | |
| 2whl_A | 294 | Beta-mannanase, baman5; glycoside hydrolase, hydro | 95.51 | |
| 3civ_A | 343 | Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1. | 95.46 | |
| 3nsx_A | 666 | Alpha-glucosidase; structural genomics, PSI-2, pro | 95.24 | |
| 1x1n_A | 524 | 4-alpha-glucanotransferase; disproportionating enz | 95.21 | |
| 1h4p_A | 408 | Glucan 1,3-beta-glucosidase I/II; hydrolase, gluca | 95.16 | |
| 2c0h_A | 353 | Mannan endo-1,4-beta-mannosidase; hydrolase, signa | 95.01 | |
| 1ur4_A | 399 | Galactanase; hydrolase, beta-1, glycoside hydrolas | 94.94 | |
| 1bqc_A | 302 | Protein (beta-mannanase); glycosyl hydrolase, fami | 94.93 | |
| 1esw_A | 500 | Amylomaltase; (beta,alpha)8-barrel, glucanotransfe | 94.88 | |
| 3cc1_A | 433 | BH1870 protein, putative alpha-N-acetylgalactosami | 94.73 | |
| 1ece_A | 358 | Endocellulase E1; glycosyl hydrolase; HET: BGC; 2. | 94.66 | |
| 3jug_A | 345 | Beta-mannanase; TIM-barrel, glycosidase, hydrolase | 94.64 | |
| 1tz7_A | 505 | 4-alpha-glucanotransferase; (beta, alpha)8- barrel | 94.29 | |
| 1wky_A | 464 | Endo-beta-1,4-mannanase; TIM barrel, catalytic dom | 94.26 | |
| 2xvl_A | 1020 | Alpha-xylosidase, putative, XYL31A; hydrolase, gly | 94.25 | |
| 1uuq_A | 440 | Mannosyl-oligosaccharide glucosidase; hydrolase, m | 94.06 | |
| 1kwg_A | 645 | Beta-galactosidase; TIM barrel, glycoside hydrolas | 94.02 | |
| 3qho_A | 458 | Endoglucanase, 458AA long hypothetical endo-1,4-be | 93.89 | |
| 3nco_A | 320 | Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1 | 93.77 | |
| 3n9k_A | 399 | Glucan 1,3-beta-glucosidase; aromatic entranceway/ | 93.73 | |
| 3pzg_A | 383 | Mannan endo-1,4-beta-mannosidase. glycosyl hydrol | 93.65 | |
| 3tty_A | 675 | Beta-GAL, beta-galactosidase; TIM barrel, glycosid | 93.53 | |
| 1vjz_A | 341 | Endoglucanase; TM1752, structural genomics, JCSG, | 93.3 | |
| 1edg_A | 380 | Endoglucanase A; family A, cellulases, xylanases, | 93.18 | |
| 1x7f_A | 385 | Outer surface protein; structural genomics, unknow | 93.04 | |
| 3icg_A | 515 | Endoglucanase D; cellulase, xylanase, carbohydrate | 92.9 | |
| 2osx_A | 481 | Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel | 92.68 | |
| 3pzt_A | 327 | Endoglucanase; alpha/beta barrel, glycosyl hydrola | 92.63 | |
| 1ceo_A | 343 | Cellulase CELC; glycosyl hydrolase, family A/5 of | 92.56 | |
| 3qr3_A | 340 | Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A | 92.52 | |
| 1tvn_A | 293 | Cellulase, endoglucanase G; glycoside hydrolase, C | 92.37 | |
| 2ki0_A | 36 | DS119; beta-alpha-beta, de novo protein; NMR {Synt | 92.33 | |
| 3ndz_A | 345 | Endoglucanase D; cellotriose, xylanase, carbohydra | 92.12 | |
| 1rh9_A | 373 | Endo-beta-mannanase; endo-beta-mannase, retaining, | 92.01 | |
| 3ebv_A | 302 | Chinitase A; chitinase A, CHIA, glycosidase, struc | 91.97 | |
| 3n12_A | 333 | Chitinase A, chinctu2; zinc atoms, complex, hydrol | 91.88 | |
| 4axn_A | 328 | Chitinase C1; hydrolase; 1.68A {Serratia marcescen | 91.71 | |
| 3aof_A | 317 | Endoglucanase; glycosyl hydrolase family 5, cellul | 91.57 | |
| 1h1n_A | 305 | Endo type cellulase ENGI; hydrolase, glycosyl hydr | 91.17 | |
| 3ayr_A | 376 | Endoglucanase; TIM barrel, hydrolase, carbohydrate | 91.12 | |
| 3a24_A | 641 | Alpha-galactosidase; glycoside hydrolase family 97 | 91.12 | |
| 1g01_A | 364 | Endoglucanase; alpha/beta barrel, TIM barrel, hydr | 91.11 | |
| 2y8k_A | 491 | Arabinoxylanase, carbohydrate binding family 6; hy | 91.06 | |
| 2jep_A | 395 | Xyloglucanase; family 5, plant cell WALL, hydrolas | 90.91 | |
| 4awe_A | 387 | Endo-beta-D-1,4-mannanase; hydrolase, endo-mannana | 90.81 | |
| 3l55_A | 353 | B-1,4-endoglucanase/cellulase; putative beta-1,4-e | 90.66 | |
| 1egz_A | 291 | Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CL | 90.58 | |
| 2y8v_A | 290 | CHIC, class III chitinase, putative; afchic, hydro | 90.34 | |
| 1uas_A | 362 | Alpha-galactosidase; TIM-barrel, beta-alpha-barrel | 90.22 | |
| 3gyc_A | 393 | Putative glycoside hydrolase; YP_001304622.1, stru | 90.17 | |
| 4hty_A | 359 | Cellulase; (alpha/beta)8 barrel, family 5 endogluc | 89.1 | |
| 3a21_A | 614 | Putative secreted alpha-galactosidase; beta-alpha- | 88.95 | |
| 7a3h_A | 303 | Endoglucanase; hydrolase, cellulose degradation, g | 88.78 | |
| 3poh_A | 451 | Endo-beta-N-acetylglucosaminidase F1; TIM barrel, | 88.73 | |
| 2w61_A | 555 | GAS2P, glycolipid-anchored surface protein 2; glyc | 88.46 | |
| 2cks_A | 306 | Endoglucanase E-5; carbohydrate metabolism, polysa | 87.77 | |
| 1edt_A | 271 | Endo-beta-N-acetylglucosaminidase H, endo H; hydro | 87.42 | |
| 2ebn_A | 289 | Endo-beta-N-acetylglucosaminidase F1; hydrolase(gl | 87.41 | |
| 4h41_A | 340 | Putative alpha-L-fucosidase; hydrolase, carbohydra | 87.25 | |
| 4ac1_X | 283 | Endo-N-acetyl-beta-D-glucosaminidase; hydrolase, g | 87.15 | |
| 2x2h_A | 1027 | Alpha-1,4-glucan lyase isozyme 1; anhydrofructose | 86.43 | |
| 2zxd_A | 455 | Alpha-L-fucosidase, putative; TIM barrel, hydrolas | 85.67 | |
| 1eok_A | 290 | Endo-beta-N-acetylglucosaminidase F3; alpha/beta-b | 85.55 | |
| 1szn_A | 417 | Alpha-galactosidase; (beta/alpha)8 barrel,TWO doma | 85.35 | |
| 1qwg_A | 251 | PSL synthase;, (2R)-phospho-3-sulfolactate synthas | 85.22 | |
| 1jak_A | 512 | Beta-N-acetylhexosaminidase; glycoside hydrolase, | 85.2 | |
| 2cho_A | 716 | Glucosaminidase, hexosaminiase; O-GLCNACASE, hydro | 85.17 | |
| 2d73_A | 738 | Alpha-glucosidase SUSB; glycoside hydrolase family | 84.31 | |
| 1esw_A | 500 | Amylomaltase; (beta,alpha)8-barrel, glucanotransfe | 83.02 | |
| 3ian_A | 321 | Chitinase; structural genomics, hydrolase, glycosi | 82.81 | |
| 3a5v_A | 397 | Alpha-galactosidase; beta/alpha barrel, N-glycosyl | 82.81 | |
| 3fnd_A | 312 | Chitinase; TIM-barrel, structural genomics, PSI-2, | 82.6 | |
| 1x1n_A | 524 | 4-alpha-glucanotransferase; disproportionating enz | 81.99 | |
| 1tz7_A | 505 | 4-alpha-glucanotransferase; (beta, alpha)8- barrel | 81.97 | |
| 3thd_A | 654 | Beta-galactosidase; TIM-barrel domain, glycosyl hy | 80.63 | |
| 3top_A | 908 | Maltase-glucoamylase, intestinal; membrane, hydrol | 80.4 | |
| 3d3a_A | 612 | Beta-galactosidase; protein structure initiative I | 80.4 | |
| 3ff4_A | 122 | Uncharacterized protein; structural genomics, PSI- | 80.14 |
| >1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-79 Score=613.39 Aligned_cols=386 Identities=47% Similarity=0.949 Sum_probs=322.4
Q ss_pred ceeEEEeeecCCCCC--CcHHHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCC-CCCCCHHHHHHHHHHHHH
Q 014892 28 REILFQGFNWESCKH--DWWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLN-SSYGSEHLLKALLHKMKQ 104 (416)
Q Consensus 28 ~~~~~q~f~~~~~~~--G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id-~~~Gt~~d~~~Lv~~aH~ 104 (416)
++||+|+|+|+++.+ |||+||+++|||||+||||+|||+||++++++|||+|.|||+|+ |+|||++||++||++||+
T Consensus 1 ~~v~~~~F~~d~~~d~~G~~~gi~~~ldyl~~lGv~~i~l~Pi~~~~~~~gY~~~d~~~id~~~~Gt~~d~~~lv~~~h~ 80 (405)
T 1ht6_A 1 HQVLFQGFNWESWKQSGGWYNMMMGKVDDIAAAGVTHVWLPPPSHSVSNEGYMPGRLYDIDASKYGNAAELKSLIGALHG 80 (405)
T ss_dssp CCCEEECCCTTGGGCTTCHHHHHHTTHHHHHHTTCCEEEECCCSCBSSTTSSSBCCTTCGGGCTTCCHHHHHHHHHHHHH
T ss_pred CccEEEeEEcCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCCCccCCCCCCCCccccccCCCccCCCHHHHHHHHHHHHH
Confidence 579999999998765 79999999999999999999999999999999999999999999 999999999999999999
Q ss_pred CCCEEEEEEccccCcCCCCCCCCcccccCCC----CCCCCCCcee----cCCCCCCCCCCCCCCCCCCcCCCCCHHHHHH
Q 014892 105 HKVRAMADIVINHRVGTTQGHGGKYNRYDGI----PLSWDEHAVT----SCTGGLGNGSTGDNFHGVPNIDHTQHFVRKD 176 (416)
Q Consensus 105 ~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~~----~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~ 176 (416)
+||+||||+|+||++.+++...+.|..|.+. +.+|.+...+ .+.++......++.+.++||||++||+||++
T Consensus 81 ~Gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~p~v~~~ 160 (405)
T 1ht6_A 81 KGVQAIADIVINHRCADYKDSRGIYCIFEGGTSDGRLDWGPHMICRDDTKYSDGTANLDTGADFAAAPDIDHLNDRVQRE 160 (405)
T ss_dssp TTCEEEEEECCSBCCCSEECTTSCEEECCCSSSSSTTCCCGGGBCTTCTTTCCSCSCCCSSCCCTTSCBBCTTCHHHHHH
T ss_pred CCCEEEEEECcCcccCCCCCCCCCcccCCCCCcCCCCCCCCccccCCCCCcCCCCCcccCCCCcCcCCccCcCCHHHHHH
Confidence 9999999999999999987655555555431 2445432111 2233333344567788999999999999999
Q ss_pred HHHHHHHHHHhcCCCeEEecccCCCcHHHHHHHHHhcCCceEEEcccCCCCC-CCCCCCCccchhhHhHhhhhccCCC--
Q 014892 177 IIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGARPIFSVGEYWDSCNY-NSHGLDYNQDSHRQRIINWIDGTGQ-- 253 (416)
Q Consensus 177 l~~~~~~w~~~~gvDGfRlD~a~~~~~~~~~~~~~~~~~~~~vgE~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~-- 253 (416)
|++++++|++++||||||+|+|++++.+||++++++++|.+++||+|..+++ +++.++|.+..+++.+..|+...++
T Consensus 161 i~~~~~~w~~~~gvDGfR~D~~~~~~~~f~~~~~~~~~p~~~igE~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~g~~~ 240 (405)
T 1ht6_A 161 LKEWLLWLKSDLGFDAWRLDFARGYSPEMAKVYIDGTSPSLAVAEVWDNMATGGDGKPNYDQDAHRQNLVNWVDKVGGAA 240 (405)
T ss_dssp HHHHHHHHHHHHCCCEEEETTGGGSCHHHHHHHHHHHCCSCEEECCCCCCCBCTTSSBCSCCHHHHHHHHHHHHHHTGGG
T ss_pred HHHHHHHHHhccCCCEEEEeccccCCHHHHHHHHHhhCCceEEEEeccCCcccCccccccccchhHHHHHHHHhccCccc
Confidence 9999999998899999999999999999999999999888999999987655 3455666543345677777765332
Q ss_pred -cccccCchhhHHHHHHhcCchhhhhhhcCCCCCccccccCcceecccCCCCCCCCCCCCCChhhHHHHHHHHhcCCCee
Q 014892 254 -LSAAFDFTTKGILQEAVKGQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFPSNHIMEGYAYILMHPGIP 332 (416)
Q Consensus 254 -~~~~fdf~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~fl~nHD~~R~~~~~~~~~~~~~~a~a~llt~pGiP 332 (416)
..++|||++...+.+++.++...+.+.++.....++..|..+++|++|||+.|+.+.+..+.+++++|++++||+||+|
T Consensus 241 ~~~~vfdf~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~~fl~nHD~~r~~~~~~~~~~~~~~a~a~llt~pG~P 320 (405)
T 1ht6_A 241 SAGMVFDFTTKGILNAAVEGELWRLIDPQGKAPGVMGWWPAKAVTFVDNHDTGSTQAMWPFPSDKVMQGYAYILTHPGIP 320 (405)
T ss_dssp SSEEEECHHHHHHHHHHTTTCGGGGSCTTSSCSSHHHHCGGGEEEESCCTTTSTTTCSSCCCGGGHHHHHHHHHHSSSEE
T ss_pred ccceeechhhHHHHHHHHhhhHHHHHhhhcccchhhhcChhhhhhccCCcCCccccccccCcHHHHHHHHHHHHhCCCcc
Confidence 3445999998888888766555554433322233344677889999999999998877666778999999999999999
Q ss_pred EEecCCcCCCchhHHHHHHHHHHHHHhCcccCCCCeEEEEecCCEEEEEECCEEEEEEcCCCCC---CCCCCcEEeeeCC
Q 014892 333 SVFYDHFYDWGDSIHNQIVKLMDVRRQQDIHSRSSIKILEAQSNLYSAIIGDKVCMKIGDGSWC---PAGKEWTLATSGH 409 (416)
Q Consensus 333 ~Iy~G~E~gw~~~l~~~~~~Li~lR~~~~~l~~G~~~~~~~~~~~~~~~R~~~~lvvinn~~~~---~~~~~~~~~ls~~ 409 (416)
+||||+|++|+ ++++||+|++|||++|+|+.|+++.+..++++++|.|+++++|++|++... +. +.|+++++|.
T Consensus 321 ~iy~G~e~~W~--~~~~~~~Li~lR~~~~al~~g~~~~~~~~~~v~af~R~~~~lv~~N~~~~~~~~~~-~~~~~~~~~~ 397 (405)
T 1ht6_A 321 CIFYDHFFNWG--FKDQIAALVAIRKRNGITATSALKILMHEGDAYVAEIDGKVVVKIGSRYDVGAVIP-AGFVTSAHGN 397 (405)
T ss_dssp EEEHHHHHTSS--CHHHHHHHHHHHHHTTCCTTCCEEEEEEETTEEEEEETTTEEEEESSCSCCGGGSC-TTCEEEEEET
T ss_pred eEEcCCCcCch--HHHHHHHHHHHHHhCcccccCceEEEecCCCEEEEEECCeEEEEEcCCCcccccCC-CccEEEecCC
Confidence 99999999998 999999999999999999999999999889999999988999999997532 23 4799999999
Q ss_pred ceEEeeC
Q 014892 410 KYAVWHK 416 (416)
Q Consensus 410 ~~~~~~~ 416 (416)
+|+||++
T Consensus 398 ~~~v~~~ 404 (405)
T 1ht6_A 398 DYAVWEK 404 (405)
T ss_dssp TEEEEEC
T ss_pred cEEEEeC
Confidence 9999986
|
| >1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-69 Score=558.56 Aligned_cols=372 Identities=28% Similarity=0.504 Sum_probs=292.2
Q ss_pred eeeccCceeEEEeeecCCCCC--CcH-HHHHhhhhhHHHcCCCEEEeCCCC----------CCCCCCCcccccCCCCC--
Q 014892 22 AVIRNGREILFQGFNWESCKH--DWW-RNLERKVPDISKSGFTSVWLPPAT----------HSFAPEGYLPQNLYSLN-- 86 (416)
Q Consensus 22 ~~~~~~~~~~~q~f~~~~~~~--G~~-~gi~~~LdyLk~LGv~~I~L~Pi~----------~~~~~~GY~~~d~~~id-- 86 (416)
.+++.+++||+|+|+|+++++ ||| +||+++|||||+||||+||||||+ +++++|||+ ||+|+
T Consensus 10 ~~~~~~~~vi~q~F~w~~~~~~gGd~~~gi~~~LdyLk~LGvt~IwL~Pi~e~~~~~~~~~~~~~~~GY~---~~~id~~ 86 (527)
T 1gcy_A 10 VRYHGGDEIILQGFHWNVVREAPNDWYNILRQQAATIAADGFSAIWMPVPWRDFSSWSDGSKSGGGEGYF---WHDFNKN 86 (527)
T ss_dssp CCCGGGCCCEEECCCTTHHHHSTTTHHHHHHHHHHHHHHTTCSEEEECCCSCCCCCBC---CCBCCSSTT---CSSSCSC
T ss_pred eeecCCCcEEEEEEEcCCCcccCCcHHHHHHHHHHHHHhcCCCEEEeCCccccccccccCCCCCCCCCcc---cccCCCC
Confidence 357788999999999998764 899 999999999999999999999999 555789999 99999
Q ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEccccCcCCCC---CCCCcccccCCCCCCCCCCceecCCCCC-CCCCCCCCC-C
Q 014892 87 SSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQ---GHGGKYNRYDGIPLSWDEHAVTSCTGGL-GNGSTGDNF-H 161 (416)
Q Consensus 87 ~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~---~~~~~~~~f~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~ 161 (416)
|+|||++|||+||++||++||+||||+|+||++.+++ |.. .+. +|.-...+..+..+ .+++.++.+ .
T Consensus 87 p~~Gt~~dfk~Lv~~aH~~GI~VilD~V~NHt~~~~~~~~~~~-~~~-------~~y~~~~~~~~~~~~~~~~~~~~f~~ 158 (527)
T 1gcy_A 87 GRYGSDAQLRQAASALGGAGVKVLYDVVPNHMNRGYPDKEINL-PAG-------QGFWRNDCADPGNYPNDCDDGDRFIG 158 (527)
T ss_dssp SSSCCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTCSSCSCCC-CSS-------SSCBGGGSCCCSSSCBTTBSSCCSTT
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEeecCcCCCCCCccccC-CCc-------chhcccccCCCCCcccCcccCccccc
Confidence 9999999999999999999999999999999999987 331 110 11000001001111 122333445 8
Q ss_pred CCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcHHHHHHHHHhcC-CceEEEcccCCCC-CCCCCCCCccch
Q 014892 162 GVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGAR-PIFSVGEYWDSCN-YNSHGLDYNQDS 239 (416)
Q Consensus 162 ~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~~~~~~~~~~~~-~~~~vgE~~~~~~-~~~~~~~~~~~~ 239 (416)
.+||||++||+||++|++++++|++++||||||+|+|++++.+||++++++++ |.+++||+|...+ +. ...|.+..
T Consensus 159 ~~~dLn~~np~Vr~~i~~~~~~w~~~~gvDGfRlDa~~~i~~~f~~~~~~~~~~p~~~vgE~~~~~~~~~--~~~y~~~~ 236 (527)
T 1gcy_A 159 GDADLNTGHPQVYGMFRDEFTNLRSQYGAGGFRFDFVRGYAPERVNSWMTDSADNSFCVGELWKGPSEYP--NWDWRNTA 236 (527)
T ss_dssp STTBBCTTSHHHHHHHHHHHHHHHHHSCEEEEEESCGGGSCHHHHHHHHHHHCTTSEEEECCCCCGGGSC--TTSGGGGS
T ss_pred cCCccccCCHHHHHHHHHHHHHHHHhcCCCeEEEeccccCCHHHHHHHHHHhcCCceEEEEecCCCCccc--cccccccc
Confidence 89999999999999999999999978999999999999999999999999997 7889999997631 10 11222211
Q ss_pred h-hHhHhhhhccCCCcccccCchhhHHHHHHhcCchhhhhhhcCCCCCccccccCcceecccCCCCCCCCCCCCC-----
Q 014892 240 H-RQRIINWIDGTGQLSAAFDFTTKGILQEAVKGQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPF----- 313 (416)
Q Consensus 240 ~-~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~fl~nHD~~R~~~~~~~----- 313 (416)
. .+.+..|+... ..++|||++...+..++. ....+ ...+ ......|..+++|++|||++|+.+....
T Consensus 237 ~~~~~~~~~~~~~--~~~~fdf~~~~~l~~~~~-~~~~l-~~~~---~~~~~~~~~~~~f~~nHD~~r~~~~~~g~~~~~ 309 (527)
T 1gcy_A 237 SWQQIIKDWSDRA--KCPVFDFALKERMQNGSI-ADWKH-GLNG---NPDPRWREVAVTFVDNHDTGYSPGQNGGQHHWA 309 (527)
T ss_dssp CHHHHHHHHHHHH--TSCEECHHHHHHHHHSCG-GGGGG-SGGG---CSSHHHHTTEEECSCCTTTSBCSSGGGBCCSSC
T ss_pred chhhHHHHHhhcc--CCceechHHHHHHHHHHH-Hhhhh-hhcC---CccccChhhceEEEeCCCCCCcccccCcccccc
Confidence 1 24455555432 467899998777777654 22222 1111 1112346678999999999998765432
Q ss_pred -ChhhHHHHHHHHhcCCCeeEEecCCcCCCchhHHHHHHHHHHHHHhCcccCCCCeEEEEecCCEEEEEE--CCEEEEEE
Q 014892 314 -PSNHIMEGYAYILMHPGIPSVFYDHFYDWGDSIHNQIVKLMDVRRQQDIHSRSSIKILEAQSNLYSAII--GDKVCMKI 390 (416)
Q Consensus 314 -~~~~~~~a~a~llt~pGiP~Iy~G~E~gw~~~l~~~~~~Li~lR~~~~~l~~G~~~~~~~~~~~~~~~R--~~~~lvvi 390 (416)
+.+++++|++++||+||+|+||||+|++|+ ++++||+|++|||++|+|+.|.++.+..++++++|.| +++++|++
T Consensus 310 ~~~~~~~~a~a~~lt~~G~P~iy~G~E~~W~--l~~~~~~Li~lRk~~~al~~g~~~~~~~~~~v~a~~r~~~~~~lv~~ 387 (527)
T 1gcy_A 310 LQDGLIRQAYAYILTSPGTPVVYWDHMYDWG--YGDFIRQLIQVRRAAGVRADSAISFHSGYSGLVATVSGSQQTLVVAL 387 (527)
T ss_dssp CCGGGHHHHHHHHHHSSSEEEEEHHHHHTSS--CHHHHHHHHHHHHHHTCCTTCEEEECTTSSSEEEEEECSSCEEEEEE
T ss_pred CChhHHHHHHHHHhCCCCcceeecccccCCh--HHHHHHHHHHHHHhChhhcCCceEEEecCCCEEEEEecCCCeEEEEE
Confidence 357899999999999999999999999997 9999999999999999999999999888888999999 58899999
Q ss_pred cCCCCCC---CCCCcEEeeeC--CceEEee
Q 014892 391 GDGSWCP---AGKEWTLATSG--HKYAVWH 415 (416)
Q Consensus 391 nn~~~~~---~~~~~~~~ls~--~~~~~~~ 415 (416)
|+++..+ +.+.|++++++ ..++||.
T Consensus 388 N~~~~~~~~v~~g~~~~~~~~~~~~~~~w~ 417 (527)
T 1gcy_A 388 NSDLGNPGQVASGSFSEAVNASNGQVRVWR 417 (527)
T ss_dssp SCCCCCGGGTCCSCCEEEEEETTTTEEEEE
T ss_pred CCCCCCceeecCCceEEEEecCCCcEEEEE
Confidence 9975432 35789999998 6899996
|
| >2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-69 Score=549.65 Aligned_cols=360 Identities=17% Similarity=0.278 Sum_probs=277.4
Q ss_pred cCceeEEEeeecCCC----------C-----------------CCcHHHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCcc
Q 014892 26 NGREILFQGFNWESC----------K-----------------HDWWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYL 78 (416)
Q Consensus 26 ~~~~~~~q~f~~~~~----------~-----------------~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~ 78 (416)
-.++||||+|.+.+. . .|||+||+++|||||+||||+|||+||++++++|||+
T Consensus 9 ~~~~viYqi~~~~F~~~gd~~~d~~~~~~~~~w~~~~~~~~~~~Gdl~gi~~~LdyL~~LGv~~I~L~Pi~~~~~~~GYd 88 (488)
T 2wc7_A 9 VKHAVFYQIFPDRFARSKQPRKRLLQEARWEDWDSMPTLQGYKGGDLWGIMEDLDYIQNLGINAIYFTPIFQSASNHRYH 88 (488)
T ss_dssp HHTCCEEEECGGGTCCCSSCCCCSCTTCCGGGGGGCHHHHC-CCCCHHHHHHTHHHHHHHTCCEEEESCCEEECTTCTTS
T ss_pred cccceEEEEccccccCCCCccCCcccccccccccCCCccCccCCcCHHHHHHhhHHHHHcCCCEEEECCCCCCCCCCCCC
Confidence 345999999998873 1 5899999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccccCcCCCCCCC--------CcccccCCCCCCCCCCceecCCCC
Q 014892 79 PQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHG--------GKYNRYDGIPLSWDEHAVTSCTGG 150 (416)
Q Consensus 79 ~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~--------~~~~~f~~~~~~~~~~~~~~~~~~ 150 (416)
|.|||+|+|+|||++||++||++||++||+||||+|+||++.+|+|+. +.|..+ +.|.+.....+...
T Consensus 89 ~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~NH~s~~~~~f~~~~~~~~~s~y~~~----y~~~~~~~~~~~~~ 164 (488)
T 2wc7_A 89 THDYYQVDPMLGGNEAFKELLDAAHQRNIKVVLDGVFNHSSRGFFFFHDVLENGPHSPWVNW----FKIEGWPLSPYNGE 164 (488)
T ss_dssp EEEEEEECGGGTHHHHHHHHHHHHHHTTCEEEEEECCSBCCSSSHHHHHHHHHGGGCTTGGG----BCBCSSSCCSSCTT
T ss_pred CcCccccCcccCCHHHHHHHHHHHHHCCCEEEEEeCCCcCCCcCHHHHHHHhcCCCCCCCCc----eeecCCCCCCCCCC
Confidence 999999999999999999999999999999999999999999998643 122111 11111000111100
Q ss_pred -CCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcHH-HHHHHHHhcC---C-ceEEEcccC
Q 014892 151 -LGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAK-YVKEYIEGAR---P-IFSVGEYWD 224 (416)
Q Consensus 151 -~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~~-~~~~~~~~~~---~-~~~vgE~~~ 224 (416)
..+.....+...+||||++||+||++|++++++|+ ++||||||||+|++++.+ ||+++++.++ | .+++||+|.
T Consensus 165 ~~~~~~~~~~~~~~pdln~~np~vr~~i~~~~~~Wl-~~gvDGfR~D~~~~i~~~~~~~~~~~~~~~~~p~~~~vgE~~~ 243 (488)
T 2wc7_A 165 FPANYVGWAGNRALPEFNHDNPEVREYIMEIAEYWL-KFGIDGWRLDVPFEIKTPGFWQEFRDRTKAINPEAYIVGEVWG 243 (488)
T ss_dssp SCCCBCBGGGCTTSBBBCTTSHHHHHHHHHHHHHHH-HHTCCEEEESSGGGCCCTTHHHHHHHHHHHHCTTCEEEECCCS
T ss_pred CCCCccccCCCCCcCeeccCCHHHHHHHHHHHHHHH-HCCCCEEEEecccccChHHHHHHHHHHHHhhCCCeEEEEEecC
Confidence 00001111346899999999999999999999999 999999999999999998 9999987763 4 789999996
Q ss_pred CCCCCCCCCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHhcCch-------------------hhhhhhcCCCC
Q 014892 225 SCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKGQF-------------------WRLRDAQGKPP 285 (416)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~~~~~-------------------~~~~~~~~~~~ 285 (416)
... .|+. ..+++++++|+++..+...+.+.. ..+...+..
T Consensus 244 ~~~------------------~~~~-~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 302 (488)
T 2wc7_A 244 DSR------------------QWLD-GTQFDGVMNYLFAGPTIAFAAGDRVVLEQVQSRDYQPYPPLFAAEYATKIQE-- 302 (488)
T ss_dssp CCG------------------GGCS-SSSCSEEEEHHHHHHHHHHHTGGGCCGGGCCTTTCCCCSCCCHHHHHHHHHH--
T ss_pred CcH------------------Hhhc-CCCcCceeCchHHHHHHHHHhcCccccccccccccccccCCCHHHHHHHHHH--
Confidence 521 2222 234678888888888777763321 111111110
Q ss_pred Cccccc----cCcceecccCCCCCCCCCCCCCChhhHHHHHHHHhcCCCeeEEecCCcCC------------------Cc
Q 014892 286 GVMGWW----PSRAVTFLDNHDTGSTQAHWPFPSNHIMEGYAYILMHPGIPSVFYDHFYD------------------WG 343 (416)
Q Consensus 286 ~~~~~~----p~~~~~fl~nHD~~R~~~~~~~~~~~~~~a~a~llt~pGiP~Iy~G~E~g------------------w~ 343 (416)
..... +...++|++|||++|+.+.++.+.+++++|++++||+||+|+||||+|+| |.
T Consensus 303 -~~~~~~~~~~~~~~~f~~nHD~~R~~~~~~~~~~~~~~a~~~ll~~pG~P~iy~G~E~g~~~~~d~~~r~~~~~~~~~~ 381 (488)
T 2wc7_A 303 -VLQLYPWEIQLTQLNLLASHDTARLMTIAGGDIASVELSTLLLLTFPGAPSIYYGDEVGLPGGIDPDSRRGFPLEANWN 381 (488)
T ss_dssp -HHTSSCHHHHTTCEECSCCTTSCCHHHHTTTCHHHHHHHHHHHHTSSSEEEEETTGGGTCCCCCC----CCCTTC-CCC
T ss_pred -HHHhccchhhcceeEeccccchhhHHHhcCCcHHHHHHHHHHHHhCCCCcEEEEeeccCcCCCCCchhhcCCCCccccC
Confidence 00111 23568999999999998877656678999999999999999999999985 35
Q ss_pred hhHHHHHHHHHHHHHhCcccCCCCeEEEEecCCEEEEEE---CCEEEEEEcCCCCC-----C--CCCCcEEeeeCCceE
Q 014892 344 DSIHNQIVKLMDVRRQQDIHSRSSIKILEAQSNLYSAII---GDKVCMKIGDGSWC-----P--AGKEWTLATSGHKYA 412 (416)
Q Consensus 344 ~~l~~~~~~Li~lR~~~~~l~~G~~~~~~~~~~~~~~~R---~~~~lvvinn~~~~-----~--~~~~~~~~ls~~~~~ 412 (416)
.+++++||+||+|||++|+|+.|+++.+..++++++|.| +++++||+|++... | .++.|++++++..+.
T Consensus 382 ~~~~~~~~~Li~lRk~~~~l~~g~~~~~~~~~~v~a~~R~~~~~~~~v~~N~~~~~~~~~l~~~~~~~~~~~l~~~~~~ 460 (488)
T 2wc7_A 382 QEIFNTHRQLITIRQTYPALRTGDYQVLYAQGQLYLFARTLGTEELIIAINAGTSSATANVDVASLHTQPNKLLYGTAE 460 (488)
T ss_dssp HHHHHHHHHHHHHHHHCTHHHHSEEEEEEEETTEEEEEEEETTEEEEEEEECSSSCEEEEEECTTCSSCCCSEEESCC-
T ss_pred HHHHHHHHHHHHHHhhCccccCCCeEEEecCCCEEEEEEECCCCEEEEEEECCCCCEEEEecCCCCceeEEeecCCcee
Confidence 679999999999999999999999999988888999998 56789999987532 1 224577777766543
|
| >1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-68 Score=534.72 Aligned_cols=358 Identities=19% Similarity=0.234 Sum_probs=278.4
Q ss_pred eeEEEeeecCCCC-----CCcHHHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCHHHHHHHHHHHH
Q 014892 29 EILFQGFNWESCK-----HDWWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMK 103 (416)
Q Consensus 29 ~~~~q~f~~~~~~-----~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH 103 (416)
.||||+|.+.++. .|||+||+++|||||+||||+|||+||++++++|||+|.||++|+|+|||++||++||++||
T Consensus 1 ~viYei~~~~F~~~~~~g~Gd~~gi~~~LdyL~~LGv~~I~L~Pi~~~~~~~GY~~~dy~~idp~~Gt~~df~~lv~~aH 80 (441)
T 1lwj_A 1 MIGYQIYVRSFRDGNLDGVGDFRGLKNAVSYLKELGIDFVWLMPVFSSISFHGYDVVDFYSFKAEYGSEREFKEMIEAFH 80 (441)
T ss_dssp CCEEEECHHHHCCSSSSSSCCHHHHHHTHHHHHHTTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHH
T ss_pred CeEEEEehHHhcCCCCCCccCHHHHHHhhHHHHHcCCCEEEeCCCcCCCCCCCCCcccccccCcccCCHHHHHHHHHHHH
Confidence 3799999987753 48999999999999999999999999999999999999999999999999999999999999
Q ss_pred HCCCEEEEEEccccCcCCCCCCCC------cc---cccCCCCCCCCCCceecCC--CCC-----CCCCCCCCCCCCCcCC
Q 014892 104 QHKVRAMADIVINHRVGTTQGHGG------KY---NRYDGIPLSWDEHAVTSCT--GGL-----GNGSTGDNFHGVPNID 167 (416)
Q Consensus 104 ~~Gi~VilD~V~NH~~~~~~~~~~------~~---~~f~~~~~~~~~~~~~~~~--~~~-----~~~~~~~~~~~~~dln 167 (416)
++||+||||+|+||++.+|+|+.. .| +.+.+....+.+. ..+. +.| .....++.+.++||||
T Consensus 81 ~~Gi~VilD~V~NH~~~~~~~f~~~~~~~~~y~d~y~~~~~~~~~~~~--~~~~~~~~w~~~~~~~~y~~~f~~~~pdln 158 (441)
T 1lwj_A 81 DSGIKVVLDLPIHHTGFLHTWFQKALKGDPHYRDYYVWANKETDLDER--REWDGEKIWHPLEDGRFYRGLFGPFSPDLN 158 (441)
T ss_dssp HTTCEEEEEECTTBCCTTCHHHHHHHTTCHHHHTTBCBCCTTSCTTCB--CSSSCCBCEEECTTSCEEECTTCTTSCBBC
T ss_pred HCCCEEEEEeCCCcccCchHHHHHHhccCCCCcceeeecCCCCCCccc--ccCCCccccccccCCceEEcccCCCCCccC
Confidence 999999999999999999986531 12 2222111111110 0000 000 1112334567899999
Q ss_pred CCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCC------cHHHHHHHHHhcCCceEEEcccCCCCCCCCCCCCccchhh
Q 014892 168 HTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGY------SAKYVKEYIEGARPIFSVGEYWDSCNYNSHGLDYNQDSHR 241 (416)
Q Consensus 168 ~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~------~~~~~~~~~~~~~~~~~vgE~~~~~~~~~~~~~~~~~~~~ 241 (416)
++||+||++|++++++|+++ ||||||+|+|+++ +.+||+++++.++.. ++||+|.. .
T Consensus 159 ~~np~V~~~l~~~~~~wl~~-gvDGfR~D~~~~i~~~~~~~~~~~~~~~~~~~~~-~igE~~~~---------------~ 221 (441)
T 1lwj_A 159 YDNPQVFDEMKRLVLHLLDM-GVDGFRFDAAKHMRDTIEQNVRFWKYFLSDLKGI-FLAEIWAE---------------A 221 (441)
T ss_dssp SSSHHHHHHHHHHHHHHHTT-TCCEEEETTGGGSSSSHHHHHHHHHHHTTTCCSE-EEECCCSC---------------H
T ss_pred CCCHHHHHHHHHHHHHHHhC-CCCEEEEeChhhhccCCccHHHHHHHHHHHhHhh-EEEccCCC---------------H
Confidence 99999999999999999965 9999999999999 889999999998765 99999974 2
Q ss_pred HhHhhhhccCCCcccccCchhhHHHHHHhc-CchhhhhhhcCCCCCccccccCcceecccCCCCCCCCCCCCCC-hhhHH
Q 014892 242 QRIINWIDGTGQLSAAFDFTTKGILQEAVK-GQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFP-SNHIM 319 (416)
Q Consensus 242 ~~l~~~~~~~~~~~~~fdf~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~fl~nHD~~R~~~~~~~~-~~~~~ 319 (416)
..+..|.. +++++|+|++...+..++. ++...+.+.+... ....+...++|++|||++|+.+.++.+ .++++
T Consensus 222 ~~~~~y~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~~~~fl~nHD~~R~~~~~~~~~~~~~~ 295 (441)
T 1lwj_A 222 RMVDEHGR---IFGYMLNFDTSHCIKEAVWKENTRVLIESIERA---VIAKDYLPVNFTSNHDMSRLASFEGGFSKEKIK 295 (441)
T ss_dssp HHHHHHHH---HHSEEECHHHHHHHHHHHHTTCSHHHHHHHHHH---TSSCSSEEEEESCCTTSCCGGGTTTCCCHHHHH
T ss_pred HHHHHHHH---hCCEeEehHHHHHHHHhhccCCHHHHHHHHHHH---hccCCCceeeeccCCCCCCcccccCCcHHHHHH
Confidence 34445543 3678999999888887763 3333333322110 011234678999999999999888655 67899
Q ss_pred HHHHHHhcCCCeeEEecCCcCC------------------Cc--------------------------------hhHHHH
Q 014892 320 EGYAYILMHPGIPSVFYDHFYD------------------WG--------------------------------DSIHNQ 349 (416)
Q Consensus 320 ~a~a~llt~pGiP~Iy~G~E~g------------------w~--------------------------------~~l~~~ 349 (416)
+|++++||+||+|+||||+|+| |+ .+++++
T Consensus 296 ~a~~~~l~~pG~P~iy~G~E~g~~~~~~~~~~~~~R~~m~W~~~~~~g~~~~w~~~~~~~~~~~~~v~~q~~~~~~l~~~ 375 (441)
T 1lwj_A 296 LSISILFTLPGVPLVFYGDELGMKGVYQKPNTEVVLDPFPWNESMCVEGQTFWKWPAYNGPFSGISVEYQKRDPDSILSH 375 (441)
T ss_dssp HHHHHHHTSSSEEEEETTTTTTCCCCCCSSCGGGGSCCCCSSSSSCSTTCCCSSCCSSCCSSSSCSHHHHTTCTTSHHHH
T ss_pred HHHHHHHhCCCceEEEchHhhCCCCCCCCCCCccccCCcccccCCCCCCCCCCCCcccccccccCCHHHhhcCcHHHHHH
Confidence 9999999999999999999974 32 258999
Q ss_pred HHHHHHHHHhCcccCCCCeEEEEecCCEEEEEE---CCEEEEEEcCCCCCCCCCCcEEeeeCCceEE
Q 014892 350 IVKLMDVRRQQDIHSRSSIKILEAQSNLYSAII---GDKVCMKIGDGSWCPAGKEWTLATSGHKYAV 413 (416)
Q Consensus 350 ~~~Li~lR~~~~~l~~G~~~~~~~~~~~~~~~R---~~~~lvvinn~~~~~~~~~~~~~ls~~~~~~ 413 (416)
||+|++||+++|+|+.|.++.+..++++++|.| +++++||+|.+.....-. ...|..++|+|
T Consensus 376 ~~~L~~lR~~~~al~~g~~~~~~~~~~v~a~~R~~~~~~~lvv~N~~~~~~~~~--~~~l~p~~~~i 440 (441)
T 1lwj_A 376 TLGWTRFRKENQWIDRAKLEFLCKEDKFLVYRLYDDQHSLKVFHNLSGEEVVFE--GVKMKPYKTEV 440 (441)
T ss_dssp HHHHHHHHHHTGGGTTCEEEEEEECSSEEEEEEEETTEEEEEEEECSSSCEEET--TEEECTTCEEE
T ss_pred HHHHHHHHhCChhhhcCceEEEecCCCEEEEEEEeCCcEEEEEEECCCCCeeec--cccccccceee
Confidence 999999999999999999999988889999998 457888888876442111 24566666665
|
| >1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-68 Score=542.17 Aligned_cols=350 Identities=18% Similarity=0.284 Sum_probs=271.2
Q ss_pred CceeEEEeeecCCCC-----CCcHHHHHhhhhhH--------HHcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCHH
Q 014892 27 GREILFQGFNWESCK-----HDWWRNLERKVPDI--------SKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEH 93 (416)
Q Consensus 27 ~~~~~~q~f~~~~~~-----~G~~~gi~~~LdyL--------k~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~ 93 (416)
.++||||+|.+.++. .|||+||++||||| |+||||+||||||++++++|||+|.||++|+|+|||++
T Consensus 3 ~~~viYqi~~~~F~~~~~~g~Gdl~gi~~~LdyL~~~~~~~~~~LGv~~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~ 82 (488)
T 1wza_A 3 KHGTYYEIFVRSFYDSDGDGIGDLKGIIEKLDYLNDGDPETIADLGVNGIWLMPIFKSPSYHGYDVTDYYKINPDYGTLE 82 (488)
T ss_dssp CCCCEEEECGGGSCCSSSSSCCCHHHHHHTHHHHCCSCTTCCSSCCCSEEEECCCEECSSSSCCSCSEEEEECGGGCCHH
T ss_pred CCcEEEEEEChhhcCCCCCCcCCHHHHHHhhhhhhccccchhhhcCccEEEECCcccCCCCCCcCcccccccCcccCCHH
Confidence 468999999998864 48999999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHCCCEEEEEEccccCcCCCCCCC-------Ccc---cccCCCCCCCCCCceecCCCCCC----CCCCCCC
Q 014892 94 LLKALLHKMKQHKVRAMADIVINHRVGTTQGHG-------GKY---NRYDGIPLSWDEHAVTSCTGGLG----NGSTGDN 159 (416)
Q Consensus 94 d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~-------~~~---~~f~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 159 (416)
||++||++||++||+||||+|+||++.+|+|+. +.| +.+.+....+....... .+.|. ....+.+
T Consensus 83 d~~~Lv~~aH~~Gi~VilD~V~NH~s~~~~~f~~~~~~~~~~y~d~y~~~~~~~~~~~~~~~~-~~~w~~~~~~~~~~~f 161 (488)
T 1wza_A 83 DFHKLVEAAHQRGIKVIIDLPINHTSERHPWFLKASRDKNSEYRDYYVWAGPDTDTKETKLDG-GRVWHYSPTGMYYGYF 161 (488)
T ss_dssp HHHHHHHHHHHTTCEEEEECCCSBCCTTSHHHHHHHTCTTCTTGGGBCBCCSCCCCCBCSSSC-BCSEEEETTEEEECSS
T ss_pred HHHHHHHHHHHCCCEEEEEeccccccCccHhhhhhhcCCCCCCcCeeecCCCCCCCCCccccC-CCcccccCCceEEecc
Confidence 999999999999999999999999999998643 122 11222111111100000 00010 0112334
Q ss_pred CCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcH--------HHHHHHHHhcC---CceEEEcccCCCCC
Q 014892 160 FHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSA--------KYVKEYIEGAR---PIFSVGEYWDSCNY 228 (416)
Q Consensus 160 ~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~--------~~~~~~~~~~~---~~~~vgE~~~~~~~ 228 (416)
+.++||||++||+||++|++++++|+++ ||||||||+|+++.+ +||+++++.++ |.+++||+|..
T Consensus 162 ~~~~pdln~~np~Vr~~i~~~~~~Wl~~-gvDGfR~Da~~~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~vgE~~~~--- 237 (488)
T 1wza_A 162 WSGMPDLNYNNPEVQEKVIGIAKYWLKQ-GVDGFRLDGAMHIFPPAQYDKNFTWWEKFRQEIEEVKPVYLVGEVWDI--- 237 (488)
T ss_dssp CTTSCBBCTTSHHHHHHHHHHHHHHHHT-TCCEEEEECCCTTSCGGGTTHHHHHHHHHHHHHTTTSCCEEEEECCSC---
T ss_pred CCCCcccccCCHHHHHHHHHHHHHHHHc-CCCChhHhhHhhhccccCcchHHHHHHHHHHHHhhcCCCEEEEEeCCC---
Confidence 6789999999999999999999999966 999999999999874 89999988764 57899999974
Q ss_pred CCCCCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHh-cCchhhhhhhcCCCCCcccc----ccCcceecccCCC
Q 014892 229 NSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAV-KGQFWRLRDAQGKPPGVMGW----WPSRAVTFLDNHD 303 (416)
Q Consensus 229 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~----~p~~~~~fl~nHD 303 (416)
...+..|... +++++|+|+++..+...+ .+....+...+......+.. .+...++|++|||
T Consensus 238 ------------~~~~~~~~~~--~~~~~~~f~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~fl~nHD 303 (488)
T 1wza_A 238 ------------SETVAPYFKY--GFDSTFNFKLAEAVIATAKAGFPFGFNKKAKHIYGVYDREVGFGNYIDAPFLTNHD 303 (488)
T ss_dssp ------------HHHHGGGGTT--TCSEEBCHHHHHHHHHHHHHTCSHHHHHHHHHHHHHHHHHTCTTSCCCBCBSCCTT
T ss_pred ------------HHHHHHHHhc--CCCEEECHHHHHHHHHhhccCCHHHHHHHHHHHHHhhhcccccccceeeeeccCCC
Confidence 2445556542 478899999988777665 33322222111100000000 1224579999999
Q ss_pred CCCCCCCCCCChhhHHHHHHHHhcCCCeeEEecCCcCC---------------Cc-------------------------
Q 014892 304 TGSTQAHWPFPSNHIMEGYAYILMHPGIPSVFYDHFYD---------------WG------------------------- 343 (416)
Q Consensus 304 ~~R~~~~~~~~~~~~~~a~a~llt~pGiP~Iy~G~E~g---------------w~------------------------- 343 (416)
++|+.+.+..+.+++++|++++||+||+|+||||+|+| |+
T Consensus 304 ~~R~~~~~~~~~~~~~la~~~llt~pG~P~iy~G~E~G~~~~~~d~~~R~pm~w~~~~~~~~~~w~~~~~~~~~~~v~~q 383 (488)
T 1wza_A 304 QNRILDQLGQDRNKARVAASIYLTLPGNPFIYYGEEIGMRGQGPHEVIREPFQWYNGSGEGETYWEPAMYNDGFTSVEQE 383 (488)
T ss_dssp SCCHHHHTTTCHHHHHHHHHHHTTSSSCCEEETTGGGTCCCCSSHHHHTCCCCCSSSCCTTCCCSSCCTTTTTTCCHHHH
T ss_pred cchhhhhhcCCHHHHHHHHHHHHhCCCCcEEEechhcCccCCCCCCCCcCCCCCCccCCCCCCCCCCCCcccccccHhhh
Confidence 99988877656778999999999999999999999975 42
Q ss_pred ----hhHHHHHHHHHHHHHhCcccCCCCeEEEEecCCEEEEEE---CCEEEEEEcCCCC
Q 014892 344 ----DSIHNQIVKLMDVRRQQDIHSRSSIKILEAQSNLYSAII---GDKVCMKIGDGSW 395 (416)
Q Consensus 344 ----~~l~~~~~~Li~lR~~~~~l~~G~~~~~~~~~~~~~~~R---~~~~lvvinn~~~ 395 (416)
.+++++||+|++|||++|+|+.|+++.+..++++++|.| +++++|++|.+..
T Consensus 384 ~~~~~~~~~~~~~Li~lRk~~~al~~G~~~~~~~~~~v~a~~R~~~~~~~~v~~N~s~~ 442 (488)
T 1wza_A 384 EKNLDSLLNHYRRLIHFRNENPVFYTGKIEIINGGLNVVAFRRYNDKRDLYVYHNLVNR 442 (488)
T ss_dssp TTCTTSHHHHHHHHHHHHHHCTHHHHSEEEEECCCTTEEEEEEECSSCEEEEEEECSSS
T ss_pred ccCcHHHHHHHHHHHHHHhcChHhhCCeeEEEcCCCcEEEEEEECCCceEEEEEECCCC
Confidence 369999999999999999999999998887788999998 5688999998653
|
| >3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-67 Score=549.45 Aligned_cols=365 Identities=17% Similarity=0.255 Sum_probs=281.2
Q ss_pred ceeEEEeeecCCC------------------------CCCcHHHHHhhhhhHHHcCCCEEEeCCCCCCC----CCCCccc
Q 014892 28 REILFQGFNWESC------------------------KHDWWRNLERKVPDISKSGFTSVWLPPATHSF----APEGYLP 79 (416)
Q Consensus 28 ~~~~~q~f~~~~~------------------------~~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~----~~~GY~~ 79 (416)
+.||||+|...++ ..|||+||+++|||||+||||+|||+||++++ ++|||++
T Consensus 106 ~~viY~i~~drF~~gd~~nd~~~~~~~~~~~~~~~~~~gGdl~gi~~~Ldyl~~LGv~aI~l~Pi~~~~~~~~~~~GY~~ 185 (601)
T 3edf_A 106 GDAIYQIMPDRFANGDPSNDNVAGMREQADRRHGGGRHGGDIRGTIDHLDYIAGLGFTQLWPTPLVENDAAAYSYHGYAA 185 (601)
T ss_dssp TCCEEEECHHHHCCSCGGGSSCTTCSCCCCTTSTTSCCCCCHHHHHHTHHHHHHTTCCEEEESCCEECCCSSSGGGCCSC
T ss_pred cCeEEEEehHHhcCCCCCcCcCcCcccccCccccccccCcCHHHHHHHHHHHHHcCCCEEEECccccCCCCCCCCCCcCc
Confidence 4789999986542 24899999999999999999999999999876 4699999
Q ss_pred ccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccccCcCCCCCCCCc-c-cccC---C-CCCCCCCCceecCCCCCCC
Q 014892 80 QNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGK-Y-NRYD---G-IPLSWDEHAVTSCTGGLGN 153 (416)
Q Consensus 80 ~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~-~-~~f~---~-~~~~~~~~~~~~~~~~~~~ 153 (416)
.||++|||+|||++||++||++||++||+||||+|+||+|.+|+|+... + .+|. + .+..|..... .++...
T Consensus 186 ~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~p~~dw~~~~~~~~~~~~~~~~~---~d~~~~ 262 (601)
T 3edf_A 186 TDHYRIDPRYGSNEDFVRLSTEARKRGMGLIQDVVLSHIGKHHWWMKDLPTPDWINYGGKFVPTQHHRVAV---QDPYAA 262 (601)
T ss_dssp SEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTSGGGGSCSSTTSBGGGGSCCBCCCCGGGG---GCTTCC
T ss_pred cccccccccCCCHHHHHHHHHHHHHcCCEEEEEECCcccCCcchhhhhCCccCceeeCCCCCCCccccccc---cCCCCc
Confidence 9999999999999999999999999999999999999999999876531 1 1111 1 0011110000 011000
Q ss_pred ------CCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcHHHHHHHHHhcC---C-ceEEEccc
Q 014892 154 ------GSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGAR---P-IFSVGEYW 223 (416)
Q Consensus 154 ------~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~~~~~~~~~~~~---~-~~~vgE~~ 223 (416)
...+....++||||++||+||++|++++++|++++||||||+|++++++.+||++++++++ | .+++||+|
T Consensus 263 ~~~~~~~~~~wf~~~lpdLN~~np~V~~~l~~~~~~Wi~~~GVDGfRlD~~~~~~~~f~~~~~~~v~~~~p~~~~vgE~~ 342 (601)
T 3edf_A 263 QADSENFTKGWFVEGMPDLNQTNPLVANYLIQNNIWWIEYAGLSGLRIDTYGYSDGAFLTEYTRRLMAEYPRLNMVGQEW 342 (601)
T ss_dssp HHHHHHHHHSBSSTTSCBBCTTSHHHHHHHHHHHHHHHHHHTCSEEEESSGGGSCHHHHHHHHHHHHHHCTTCEEEECCC
T ss_pred cccccccccccccccccccccCCHHHHHHHHHHHHHHHhhcCCCEEEeeccccCCHHHHHHHHHHHHHhCCCeEEEeeec
Confidence 0011124689999999999999999999999999999999999999999999999988764 4 78999999
Q ss_pred CCCCCCCCCCCCccchhhHhHhhhhcc-------CCCcccccCchhhHHHHHHhcCc-----hhhhhhhcCCCCCccccc
Q 014892 224 DSCNYNSHGLDYNQDSHRQRIINWIDG-------TGQLSAAFDFTTKGILQEAVKGQ-----FWRLRDAQGKPPGVMGWW 291 (416)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~~~~~~fdf~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~ 291 (416)
... ...+..|... ..++.++|||++...+..++.+. ...+.+.+... .....
T Consensus 343 ~~~--------------~~~~~~~~~~~~~~~~~~~~l~~v~nf~~~~~l~~~~~~~~~~~~~~~l~~~~~~~--~~~~~ 406 (601)
T 3edf_A 343 STR--------------VPVVARWQRGKANFDGYTSHLPSLMDFPLVDAMRNALSKTGEENGLNEVYETLSLD--YLYPE 406 (601)
T ss_dssp CSC--------------HHHHHTTSTTCCCTTCCCCCCCEEBCHHHHHHHHHHHHCTTSSSTTHHHHHHHGGG--GGSSC
T ss_pred CCc--------------hHHHhhhhccccccccccccCCeEEChHHHHHHHHHHhccchhhHHHHHHHHHhhh--cccCC
Confidence 763 1223333322 13467899999999999988543 22333332211 11122
Q ss_pred cCcceecccCCCCCCCCCCCCCChhhHHHHHHHHhcCCCeeEEecCCcCC--------------------Cc--------
Q 014892 292 PSRAVTFLDNHDTGSTQAHWPFPSNHIMEGYAYILMHPGIPSVFYDHFYD--------------------WG-------- 343 (416)
Q Consensus 292 p~~~~~fl~nHD~~R~~~~~~~~~~~~~~a~a~llt~pGiP~Iy~G~E~g--------------------w~-------- 343 (416)
|...++|++|||++|+.+.++.+.+++++|++++||+||+|+||||+|+| |+
T Consensus 407 ~~~~~~fl~NHD~~R~~s~~~~~~~~~k~a~alllt~pG~P~IYyG~E~G~~~~~~~~~d~~~R~~~p~~W~~~~~~~F~ 486 (601)
T 3edf_A 407 PQNLVLFGGNHDMARMFSAAGEDFDRWRMNLVFLMTMPRIPQFYSGDEILMTSTVKGRDDASYRRDFPGGWAGDKANAFS 486 (601)
T ss_dssp GGGSEEESCCTTSCCHHHHTTTCHHHHHHHHHHHHHSSSEEEEETTGGGTCCCCCSSCCGGGGCCCCTTSSTTCSSBTTT
T ss_pred ccceEEeeccCCCCCchhhcCCCHHHHHHHHHHHHhcCCCcEEEeehcccccCCCCCCCChhhhhcCccCcCcccccCcC
Confidence 45789999999999998766657778999999999999999999999974 42
Q ss_pred --------hhHHHHHHHHHHHHHhCcccCCCCeEEEEecCCEEEEEE---CCEEEEEEcCCCCC-----C-------CCC
Q 014892 344 --------DSIHNQIVKLMDVRRQQDIHSRSSIKILEAQSNLYSAII---GDKVCMKIGDGSWC-----P-------AGK 400 (416)
Q Consensus 344 --------~~l~~~~~~Li~lR~~~~~l~~G~~~~~~~~~~~~~~~R---~~~~lvvinn~~~~-----~-------~~~ 400 (416)
.+++++||+|++|||++|+|+.|+++.+..++++++|.| +++++||+|++... + .++
T Consensus 487 ~~~~~~~~~~l~~~~~~Li~lRk~~~al~~G~~~~~~~~~~v~af~R~~~~~~vlVv~N~s~~~~~~~l~~~~~~l~~~~ 566 (601)
T 3edf_A 487 GAGLTSQQRAAQDLVRKLANWRKNQPVIHNGRLMHFGPEENTWVYFRYNKDKRIMVAMNNNDKPMTLPTARFQEMLKGAP 566 (601)
T ss_dssp TBTCCHHHHHHHHHHHHHHHHHHTCHHHHHSEEEECCCBTTEEEEEEECSSEEEEEEEECSSSCEEEEGGGGHHHHTTCC
T ss_pred ccccccchHHHHHHHHHHHHHHhhCccccCCceEEEEecCCEEEEEEEcCCCEEEEEEECCCCCEEEECccchhhccCCC
Confidence 468999999999999999999999999888889999998 56788999986532 1 245
Q ss_pred CcEEeeeCCce
Q 014892 401 EWTLATSGHKY 411 (416)
Q Consensus 401 ~~~~~ls~~~~ 411 (416)
.|+++++|..+
T Consensus 567 ~~~dllsg~~~ 577 (601)
T 3edf_A 567 SGVDFLSGKTV 577 (601)
T ss_dssp EEEETTTCCEE
T ss_pred ceEEcccCcEE
Confidence 57766666554
|
| >2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-67 Score=533.85 Aligned_cols=362 Identities=17% Similarity=0.246 Sum_probs=279.2
Q ss_pred ccCceeEEEeeecCC-C---------C----------------CCcHHHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCcc
Q 014892 25 RNGREILFQGFNWES-C---------K----------------HDWWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYL 78 (416)
Q Consensus 25 ~~~~~~~~q~f~~~~-~---------~----------------~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~ 78 (416)
|-.++||||+|...+ + . .|||+||+++|||||+||||+||||||++++++|||+
T Consensus 3 W~~~~viYqi~~~~F~~~gd~~~~~~g~~~~~~~~~~~~~~~~~G~~~gi~~~LdyL~~LGv~~I~l~Pi~~~~~~~gY~ 82 (475)
T 2z1k_A 3 WYEGAFFYQIFPDRFFRAGPPGRPAPAGPFEPWEAPPTLRGFKGGTLWGVAEKLPYLLDLGVEAIYLNPVFASTANHRYH 82 (475)
T ss_dssp TTSSCCEEEECGGGSCCCSCCCSSCCCSCCCCTTSCCCSSCCCCCCHHHHHHTHHHHHHHTCCEEEECCCEEESSTTCCS
T ss_pred cccCceEEEEccCeecCCCCcccCCCccccccccCCCCccccCCCCHHHHHHHhHHHHHcCCCEEEECCCcCCCCCCCcC
Confidence 345689999999887 2 1 5899999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccccCcCCCCCCC--------CcccccCCCCCCCCCCceecCCCC
Q 014892 79 PQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHG--------GKYNRYDGIPLSWDEHAVTSCTGG 150 (416)
Q Consensus 79 ~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~--------~~~~~f~~~~~~~~~~~~~~~~~~ 150 (416)
|.|||+|+|+|||++|||+||++||++||+||||+|+||++.+|+|+. +.|..+ +.|.+.....++ +
T Consensus 83 ~~dy~~idp~~Gt~~df~~lv~~~h~~Gi~VilD~V~NH~~~~~~~f~~~~~~g~~s~y~~~----y~~~~~~~~~~~-~ 157 (475)
T 2z1k_A 83 TVDYFQVDPILGGNEALRHLLEVAHAHGVRVILDGVFNHTGRGFFAFQHLMENGEQSPYRDW----YHVKGFPLKAYT-A 157 (475)
T ss_dssp EEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTSHHHHHHHHHGGGCTTGGG----BCBCSSSCCTTS-S
T ss_pred CCCcCccCcccCCHHHHHHHHHHHHHCCCEEEEEEecccccCCCHHHHHHHhcCCCCCCcce----eecCCCCCcCCC-C
Confidence 999999999999999999999999999999999999999999988642 122111 011110000000 0
Q ss_pred CCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcHH-HHHHHHHhcC---C-ceEEEcccCC
Q 014892 151 LGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAK-YVKEYIEGAR---P-IFSVGEYWDS 225 (416)
Q Consensus 151 ~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~~-~~~~~~~~~~---~-~~~vgE~~~~ 225 (416)
..+.........+||||++||+||++|++++++|+ ++||||||+|++++++.+ ||+++++.++ | .+++||+|..
T Consensus 158 ~~~y~~~~~~~~~pdln~~np~v~~~i~~~~~~w~-~~gvDGfR~D~~~~~~~~~~~~~~~~~~~~~~p~~~~igE~~~~ 236 (475)
T 2z1k_A 158 HPNYEAWWGNPELPKLKVETPAVREYLLAVAEHWI-RFGVDGWRLDVPNEIPDPTFWREFRQRVKGANPEAYIVGEIWEE 236 (475)
T ss_dssp SCSBCBGGGCTTSBBBCTTSHHHHHHHHHHHHHHH-HHTCCEEEESSGGGCCCHHHHHHHHHHHHHHCTTCEEEECCSSC
T ss_pred CCCccccCCCCCcCccccCCHHHHHHHHHHHHHHH-HCCCCEEeecccccCCHHHHHHHHHHHHhhcCCCcEEEEEecCC
Confidence 01111112347899999999999999999999999 999999999999999998 9999987764 4 7899999975
Q ss_pred CCCCCCCCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHhcCc-------------------hhhhhhhcCCCCC
Q 014892 226 CNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKGQ-------------------FWRLRDAQGKPPG 286 (416)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~~~~-------------------~~~~~~~~~~~~~ 286 (416)
.. .++. ..++++++++++...+...+.+. ...+...+.....
T Consensus 237 ~~------------------~~~~-~~~~d~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 297 (475)
T 2z1k_A 237 AD------------------FWLQ-GDMFDAVMNYPLARAVLGFVGGEALDRDLAAQTGLGRIEPLQALAFSHRLEDLFG 297 (475)
T ss_dssp CS------------------GGGS-SSSCSEEBCHHHHHHHHHHHHGGGSCHHHHTTSTTCSCCCCCHHHHHHHHHHHTT
T ss_pred cc------------------cccc-CCCcCeeeChhHHHHHHHHHhCCccccccccccccccccCCCHHHHHHHHHHHHH
Confidence 21 1222 23577889999888888776332 1122211110000
Q ss_pred ccc-cccCcceecccCCCCCCCCCCCCCChhhHHHHHHHHhcCCCeeEEecCCcCC--------------Cc-----hhH
Q 014892 287 VMG-WWPSRAVTFLDNHDTGSTQAHWPFPSNHIMEGYAYILMHPGIPSVFYDHFYD--------------WG-----DSI 346 (416)
Q Consensus 287 ~~~-~~p~~~~~fl~nHD~~R~~~~~~~~~~~~~~a~a~llt~pGiP~Iy~G~E~g--------------w~-----~~l 346 (416)
.+. ..+...++|++|||++|+.+.++.+.+++++|++++||+||+|+||||+|+| |+ .++
T Consensus 298 ~~~~~~~~~~~~f~~nHD~~R~~~~~~~~~~~~~~a~a~ll~~pG~P~iy~G~E~g~~~~~d~~~r~~~~W~~~~~~~~l 377 (475)
T 2z1k_A 298 RYRPEVVRAQMNLLTSHDTPRLLSLMRGSVERARLALALLFLLPGNPTVYYGEEVGMAGGKDPENRGGMVWEEARWQKDL 377 (475)
T ss_dssp SSCHHHHTTCEECSCCTTSCCHHHHTTTCHHHHHHHHHHHTTSSSEEEEETTGGGTCCCCSTTTTCCCCCCCGGGSCHHH
T ss_pred hccchhhhhheeeccCCchhhHHHhcCCcHHHHHHHHHHHHhCCCCCEEEeecccCcCCCCChhhccCCCCCcccccHHH
Confidence 010 1123568999999999988877656778999999999999999999999975 43 379
Q ss_pred HHHHHHHHHHHHhCcccCCCCeEEEEecCCEEEEEECCEEEEEEcCCCCC-----C-CC-----CCcEEeeeCCceE
Q 014892 347 HNQIVKLMDVRRQQDIHSRSSIKILEAQSNLYSAIIGDKVCMKIGDGSWC-----P-AG-----KEWTLATSGHKYA 412 (416)
Q Consensus 347 ~~~~~~Li~lR~~~~~l~~G~~~~~~~~~~~~~~~R~~~~lvvinn~~~~-----~-~~-----~~~~~~ls~~~~~ 412 (416)
+++||+|++|||++|+|+.|+++.+..++++++|.| ++++|++|++... | .. +.|++++++..+.
T Consensus 378 ~~~~~~Li~lRk~~~~l~~g~~~~~~~~~~v~a~~R-~~~lv~~N~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~ 453 (475)
T 2z1k_A 378 RETVKRLARLRKEHPALRTAPYLRIYAQDGHLAFAR-GPYLAVVNASPHPFRQDFPLHGVFPRGGRAVDLLSGEVCT 453 (475)
T ss_dssp HHHHHHHHHHHHHCTHHHHSCCEEEEEETTEEEEEE-TTEEEEEECSSSCEECCSBCTTSCTTCCCEEETTTCCEEC
T ss_pred HHHHHHHHHHHhcCHhhcCCceEEEecCCCEEEEEE-CeEEEEEECCCCCEEEEeccccccccCceeeeeecCceeE
Confidence 999999999999999999999999988889999999 8899999996532 2 11 5688888877654
|
| >4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-68 Score=557.55 Aligned_cols=350 Identities=15% Similarity=0.212 Sum_probs=266.4
Q ss_pred ccCceeEEEeeecCCCC---------------CCcHHHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCCCCC
Q 014892 25 RNGREILFQGFNWESCK---------------HDWWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSY 89 (416)
Q Consensus 25 ~~~~~~~~q~f~~~~~~---------------~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~ 89 (416)
|-.++||||+|...++. .|||+||++||||||+||||+||||||++++++|||+|+||++|+|+|
T Consensus 203 W~~~aViYqI~p~~F~~~~~~~g~~~~~~~~~gGdl~Gi~~kLdYLk~LGvt~I~L~Pif~s~~~~GYd~~dy~~idp~~ 282 (645)
T 4aef_A 203 WVIDRVFYQIMPDKFARSRKIQGIAYPKDKYWGGDLIGIKEKIDHLVNLGINAIYLTPIFSSLTYHGYDIVDYFHVARRL 282 (645)
T ss_dssp GGGGCCEEEECHHHHCCCSSCC---------CCCCHHHHHHTHHHHHHHTCCEEEECCCEEESSTTCSSEEEEEEECGGG
T ss_pred hHcCCEEEEEecchhcCCCCCCcccCCcCcCCCcCHHHHHHhhHHHHHcCCCEEEECCCCCCCCCCCcCccCCCccCccc
Confidence 34569999999876532 289999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHCCCEEEEEEccccCcCCCCCCC--------CcccccC-CCCCCCCCCce---ecCCCCCCC----
Q 014892 90 GSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHG--------GKYNRYD-GIPLSWDEHAV---TSCTGGLGN---- 153 (416)
Q Consensus 90 Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~--------~~~~~f~-~~~~~~~~~~~---~~~~~~~~~---- 153 (416)
||++||++||++||++||+||||+|+||+|..|+|+. +.|..+- .......+... ......+..
T Consensus 283 Gt~~df~~LV~~aH~~GI~VIlD~V~NHts~~h~wf~~~~~~~~~s~~~d~y~~~~~~~~~~~~~~~~~~~~~w~~~~~~ 362 (645)
T 4aef_A 283 GGDRAFVDLLSELKRFDIKVILDGVFHHTSFFHPYFQDVVRKGENSSFKNFYRIIKFPVVSKEFLQILHSKSSWEEKYKK 362 (645)
T ss_dssp TCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTSHHHHHHHHHSTTCTTGGGBCBSSSSCSCTTHHHHHHHSCGGGTTHHH
T ss_pred CCHHHHHHHHHHhhhcCCEEEEEecccccccCCchhhhHhhcCCCCCcccccEeccCCCcccccccccCCCccccccccc
Confidence 9999999999999999999999999999999998643 2222111 00000000000 000000000
Q ss_pred -------CCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcHHHHHHHHHhcCC-ceEEEcccCC
Q 014892 154 -------GSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGARP-IFSVGEYWDS 225 (416)
Q Consensus 154 -------~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~~~~~~~~~~~~~-~~~vgE~~~~ 225 (416)
.........+||||++||+||+++++++++|+ ++||||||+|+|++++++||+++.+.+++ .+++||+|+.
T Consensus 363 ~~~~~~~y~~~~~~~~~pdLn~~np~V~~~~~~~~~~Wl-~~gvDGfR~D~a~~i~~~f~~~~~~~~~~~~~~~gE~~~~ 441 (645)
T 4aef_A 363 IKSLGWNYESFFSVWIMPRLNHDNPKVREFIKNVILFWT-NKGVDGFRMDVAHGVPPEVWKEVREALPKEKYLIGEVMDD 441 (645)
T ss_dssp HHHHCCSBCEETTEEEEEBBCTTSHHHHHHHHHHHHHHH-HTTCCEEEETTGGGSCHHHHHHHHHHSCTTCEEEECCCSC
T ss_pred ccccccccccccccccCccccccCHHHHHHHHHHHHHHH-hcCCCEEEeccccccchhHHHHHHhhhhcccccccccccc
Confidence 00011124689999999999999999999999 67999999999999999999999999876 6799999975
Q ss_pred CCCCCCCCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHhcCc---hhhhhhhcCCCCCccccccCcceecccCC
Q 014892 226 CNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKGQ---FWRLRDAQGKPPGVMGWWPSRAVTFLDNH 302 (416)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~p~~~~~fl~nH 302 (416)
.. .+. .....+++++.+...+...+... ...+...+..........+...++|++||
T Consensus 442 ~~------------------~~~--~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~nH 501 (645)
T 4aef_A 442 AR------------------LWL--FDKFHGVMNYRLYDAILRFFGYEEITAEEFLNELELLSSYYGPAEYLMYNFLDNH 501 (645)
T ss_dssp CG------------------GGT--TTTCSEEBCHHHHHHHHHHTTSCCSCHHHHHHHHHHHHHHHGGGGGGCBCCSCCT
T ss_pred ch------------------hhh--ccccceecchhHHHHHHHhhhccccchHHHHHHHHHHhhhccccccccccccCCC
Confidence 21 111 12356778888877777766322 11111111000000111223567999999
Q ss_pred CCCCCCCCCCCChhhHHHHHHHHhcCCCeeEEecCCcCC-----------------C-----chhHHHHHHHHHHHHHhC
Q 014892 303 DTGSTQAHWPFPSNHIMEGYAYILMHPGIPSVFYDHFYD-----------------W-----GDSIHNQIVKLMDVRRQQ 360 (416)
Q Consensus 303 D~~R~~~~~~~~~~~~~~a~a~llt~pGiP~Iy~G~E~g-----------------w-----~~~l~~~~~~Li~lR~~~ 360 (416)
|++|+.+.++ +.+++++|++++||+||+|+||||||+| | ++++++++|+||+|||++
T Consensus 502 D~~R~~s~~g-d~~~~~~a~a~llt~pG~P~iyyGdE~G~~~~~~~~~~~~R~pm~W~~~~~~~~l~~~~r~Li~lRk~~ 580 (645)
T 4aef_A 502 DVERFLDIVG-DKRKYVCALVFLMTYKGIPSLFYGDEIGLRGINLQGMESSRAPMLWNEEEWDQRILEITKTLVKIRKNN 580 (645)
T ss_dssp TSCCHHHHHC-CHHHHHHHHHHHHHSSSBCEEETTGGGTCCCEEETTEEESCCCCCCCGGGSCHHHHHHHHHHHHHHHTC
T ss_pred CCcccccccC-CHHHHHHHHHHHHHcCCCcEEECChhhCCCCCCCCCCccccCCCCCCCccccHHHHHHHHHHHHHHhcC
Confidence 9999887765 5678999999999999999999999985 3 247999999999999999
Q ss_pred cccCCCCeEEEEecCCEEEEEE---CCEEEEEEcCCCCC
Q 014892 361 DIHSRSSIKILEAQSNLYSAII---GDKVCMKIGDGSWC 396 (416)
Q Consensus 361 ~~l~~G~~~~~~~~~~~~~~~R---~~~~lvvinn~~~~ 396 (416)
|+|+.|+++.+..+++++||.| +++++||+|+++..
T Consensus 581 paL~~G~~~~~~~~~~v~af~R~~~~~~~lVv~N~s~~~ 619 (645)
T 4aef_A 581 KALLFGNFVPVKFKRKFMVYKREHMGERTIVAINYSNSR 619 (645)
T ss_dssp HHHHHCEEEEEEEETTEEEEEEEETTEEEEEEEECSSSC
T ss_pred HHHhcCceEEEEcCCCEEEEEEEeCCCEEEEEEECCCCC
Confidence 9999999999999999999998 56889999987643
|
| >1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-65 Score=523.03 Aligned_cols=363 Identities=22% Similarity=0.417 Sum_probs=272.3
Q ss_pred CceeEEEeeecCCCCC-CcHHHHHhhhhhHHHcCCCEEEeCCCCCCC--CCCCcccccCCC---------CCCCCCCHHH
Q 014892 27 GREILFQGFNWESCKH-DWWRNLERKVPDISKSGFTSVWLPPATHSF--APEGYLPQNLYS---------LNSSYGSEHL 94 (416)
Q Consensus 27 ~~~~~~q~f~~~~~~~-G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~--~~~GY~~~d~~~---------id~~~Gt~~d 94 (416)
.++||||+|+|+++.+ |+|+||+++|||||+||||+||||||+++. .+|||+|.||++ |+|+|||++|
T Consensus 3 ~~~vi~q~f~w~~~~~gG~~~gi~~~LdyL~~LGvt~I~l~Pi~~~~~~~~~GY~~~dy~~~~~~~~~~~idp~~Gt~~d 82 (480)
T 1ud2_A 3 LNGTMMQYYEWHLENDGQHWNRLHDDAAALSDAGITAIWIPPAYKGNSQADVGYGAYDLYDLGEFNQKGTVRTKYGTKAQ 82 (480)
T ss_dssp CCCCEEECCCTTCCCSSCHHHHHHHHHHHHHHHTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCHHH
T ss_pred CCceEEEeeeccCCCCCCcHHHHHHHHHHHHHcCCCEEEeCCcccCCCCCCCCcCccchhhcccccccCccCCCCCCHHH
Confidence 3689999999999876 699999999999999999999999999954 689999999995 9999999999
Q ss_pred HHHHHHHHHHCCCEEEEEEccccCcC--CCCCCCCc-------------------ccc--cCCC--C---CCCCCCcee-
Q 014892 95 LKALLHKMKQHKVRAMADIVINHRVG--TTQGHGGK-------------------YNR--YDGI--P---LSWDEHAVT- 145 (416)
Q Consensus 95 ~~~Lv~~aH~~Gi~VilD~V~NH~~~--~~~~~~~~-------------------~~~--f~~~--~---~~~~~~~~~- 145 (416)
|++||++||++||+||||+|+||++. .++|+... |.. |.+. + ..|+..+..
T Consensus 83 f~~lv~~aH~~Gi~VilD~V~NH~~~~~~~~~f~~~~~~~~~~~~~~g~~~~~~~w~~~~~pg~~~~y~~~~~~~~~~~~ 162 (480)
T 1ud2_A 83 LERAIGSLKSNDINVYGDVVMNHKMGADFTEAVQAVQVNPTNRWQDISGAYTIDAWTGFDFSGRNNAYSDFKWRWFHFNG 162 (480)
T ss_dssp HHHHHHHHHHTTCEEEEEECCSEECCCSEEEEEEEEEEETTEEEEECSCCEEEEEEEEBCCGGGTTSSCCCCBCGGGEEE
T ss_pred HHHHHHHHHHCCCEEEEEEccCccccccccccceeeecCCcccccccccccccccccccccCCCCCCcccCcccccccCC
Confidence 99999999999999999999999974 44442110 000 0000 0 011100000
Q ss_pred -cC-------------CCCCCC----CCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcHHHHH
Q 014892 146 -SC-------------TGGLGN----GSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVK 207 (416)
Q Consensus 146 -~~-------------~~~~~~----~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~~~~~ 207 (416)
.+ ...|.. ....+.+..+||||++||+||++|++++++|++++||||||||+|++++.+||+
T Consensus 163 ~d~~~~~~~~~~~~~~~~~W~~~~~~~~g~~~~~~~~dLn~~np~V~~~l~~~~~~w~~~~gvDGfR~Da~~~i~~~f~~ 242 (480)
T 1ud2_A 163 VDWDQRYQENHIFRFANTNWNWRVDEENGNYDYLLGSNIDFSHPEVQDELKDWGSWFTDELDLDGYRLDAIKHIPFWYTS 242 (480)
T ss_dssp EEEETTTTEEEEEEETTCCCCSSCCCTTSCCCCCSSEEECTTSHHHHHHHHHHHHHHHHHHTCSEEEETTGGGSCHHHHH
T ss_pred CCCcccccccccccccCCCcccccccccCccccccCCccCCCCHHHHHHHHHHHHHHHHccCCCEEEEcchhhCCHHHHH
Confidence 00 112211 012234566799999999999999999999998899999999999999999999
Q ss_pred HHHHhcC----C-ceEEEcccCCCCCCCCCCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHhcC-chhhhhhhc
Q 014892 208 EYIEGAR----P-IFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKG-QFWRLRDAQ 281 (416)
Q Consensus 208 ~~~~~~~----~-~~~vgE~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~~~-~~~~~~~~~ 281 (416)
+++++++ | .+++||+|... ...+..|+...++..++|||++...+..++.+ ....+.+.+
T Consensus 243 ~~~~~~~~~~~~~~~~igE~~~~~--------------~~~~~~y~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~~ 308 (480)
T 1ud2_A 243 DWVRHQRNEADQDLFVVGEYWKDD--------------VGALEFYLDEMNWEMSLFDVPLNYNFYRASQQGGSYDMRNIL 308 (480)
T ss_dssp HHHHHHHHHCSSCCEEEECCCCSC--------------HHHHHHHHHHTTTCSEEECHHHHHHHHHHHHHCTTSCGGGTT
T ss_pred HHHHHHHHhcCCCcEEEEeccCCC--------------HHHHHHHHhccCCcceeechHHHHHHHHHHhcCCcccHHHHH
Confidence 9988753 3 78999999762 24556676654445678999999999888742 222333322
Q ss_pred CCCCCccccccCcceecccCCCCCCCCCCCCCC-hhhHHHHHHHHhcCC-CeeEEecCCcCCCch----hHHHHHHHHHH
Q 014892 282 GKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFP-SNHIMEGYAYILMHP-GIPSVFYDHFYDWGD----SIHNQIVKLMD 355 (416)
Q Consensus 282 ~~~~~~~~~~p~~~~~fl~nHD~~R~~~~~~~~-~~~~~~a~a~llt~p-GiP~Iy~G~E~gw~~----~l~~~~~~Li~ 355 (416)
.. .+....|..+++|++|||++|+.+..... ..+.++|++++|++| |+|+||||+|+|... +++++|++|++
T Consensus 309 ~~--~~~~~~~~~~~~f~~nHD~~r~~~~~~~~~~~~~~~a~a~~l~~~~G~P~iy~G~E~g~~g~~d~~~~~~~~~Li~ 386 (480)
T 1ud2_A 309 RG--SLVEAHPMHAVTFVDNHDTQPGESLESWVADWFKPLAYATILTREGGYPNVFYGDYYGIPNDNISAKKDMIDELLD 386 (480)
T ss_dssp TT--CHHHHCGGGEEECSCCTTTSTTSTTCCCCCTTTHHHHHHHHHSSSSSEEEEEHHHHHCBGGGTBCCCHHHHHHHHH
T ss_pred hc--cccccCCCceEEEeccCCCCccccccccchhHHHHHHHHHHHHCCCCceEEecchhhCCCCCCCchHHHHHHHHHH
Confidence 21 11223466789999999999998766432 235689999999997 999999999998743 57899999999
Q ss_pred HHHhCcccCCCCeEEEEecCCEEEEEE--C-C----EEEEEEcCCCC------CC---CCCCcEEeeeC
Q 014892 356 VRRQQDIHSRSSIKILEAQSNLYSAII--G-D----KVCMKIGDGSW------CP---AGKEWTLATSG 408 (416)
Q Consensus 356 lR~~~~~l~~G~~~~~~~~~~~~~~~R--~-~----~~lvvinn~~~------~~---~~~~~~~~ls~ 408 (416)
||+++ +.|.+..+..++++++|.| + + .++||+||.+. .+ .++.|++++++
T Consensus 387 lR~~~---~~g~~~~~~~~~~~~af~R~~~~~~~~~~~vvv~~N~~~~~~~~~~~~~~~~~~~~d~l~~ 452 (480)
T 1ud2_A 387 ARQNY---AYGTQHDYFDHWDVVGWTREGSSSRPNSGLATIMSNGPGGSKWMYVGRQNAGQTWTDLTGN 452 (480)
T ss_dssp HHHHT---CCSCEEEECCSSSEEEEEECCCTTSTTCCEEEEEESSSCEEEEEECCGGGTTCEEEETTSS
T ss_pred HHHHh---ccCCceEEecCCCEEEEEEEcCCCCCCCCEEEEEECCCCCcEEEEecCcCCCCEEEehhCC
Confidence 99995 6788888777778999998 2 2 57777666431 11 34668887765
|
| >3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-65 Score=523.01 Aligned_cols=358 Identities=23% Similarity=0.452 Sum_probs=271.2
Q ss_pred ceeEEEeeecCCCCC-CcHHHHHhhhhhHHHcCCCEEEeCCCCCCC--CCCCcccccCCC---------CCCCCCCHHHH
Q 014892 28 REILFQGFNWESCKH-DWWRNLERKVPDISKSGFTSVWLPPATHSF--APEGYLPQNLYS---------LNSSYGSEHLL 95 (416)
Q Consensus 28 ~~~~~q~f~~~~~~~-G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~--~~~GY~~~d~~~---------id~~~Gt~~d~ 95 (416)
.+||||+|.|+.+.+ |+|+||+++|||||+||||+||||||+++. .+|||++.||++ |+|+|||++||
T Consensus 2 ~~vi~q~f~w~~~~~gG~~~gi~~~LdyL~~LGvt~I~L~Pi~~~~~~~~~GY~~~dy~~~~~~~~~~~id~~~Gt~~df 81 (483)
T 3bh4_A 2 NGTLMQYFEWYTPNDGQHWKRLQNDAEHLSDIGITAVWIPPAYKGLSQSDNGYGPYDLYDLGEFQQKGTVRTKYGTKSEL 81 (483)
T ss_dssp CCCEEECCCTTCCSSSCHHHHHHHHHHHHHHHTCCEEEECCCSEESSTTSCSSSEEETTCSSCSCCSSCSSCSSCCHHHH
T ss_pred CccEEEEEEeccCCCCCCHHHHHHHHHHHHhcCCCEEEcCccccCCCCCCCCcccccccccccccccCccCCCCCCHHHH
Confidence 479999999998875 699999999999999999999999999954 589999999995 99999999999
Q ss_pred HHHHHHHHHCCCEEEEEEccccCcC--CCCCCC-------------------------------CcccccCCCCCCCCCC
Q 014892 96 KALLHKMKQHKVRAMADIVINHRVG--TTQGHG-------------------------------GKYNRYDGIPLSWDEH 142 (416)
Q Consensus 96 ~~Lv~~aH~~Gi~VilD~V~NH~~~--~~~~~~-------------------------------~~~~~f~~~~~~~~~~ 142 (416)
++||++||++||+||||+|+||++. .++|+. +.|..+ .|+..
T Consensus 82 ~~lv~~aH~~Gi~VilD~V~NH~~~~d~~~~f~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~y~~~-----~~~~~ 156 (483)
T 3bh4_A 82 QDAIGSLHSRNVQVYGDVVLNHKAGADATEDVTAVEVNPANRNQETSEEYQIKAWTDFRFPGRGNTYSDF-----KWHWY 156 (483)
T ss_dssp HHHHHHHHHTTCEEEEEECCSEECCCSEEEEEEEEEEETTEEEEECSCCEEEEEEEEBCCTTTTTSSCCC-----CBCGG
T ss_pred HHHHHHHHHCCCEEEEEEccCcccCcccccceeeeeeCccccccccccccccccccccccCCCCcccccC-----ccccc
Confidence 9999999999999999999999974 343321 111110 11100
Q ss_pred cee--cC---------------CCCCCC----CCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCC
Q 014892 143 AVT--SC---------------TGGLGN----GSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGY 201 (416)
Q Consensus 143 ~~~--~~---------------~~~~~~----~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~ 201 (416)
+.. .+ ...|.. ....+.+..+||||++||+||++|++++++|++++||||||+|+|+++
T Consensus 157 ~~~~~d~~~~~~~~~~~~~~g~~~~W~~~~~~~~~~~~~~~~~dln~~np~V~~~l~~~~~~w~~~~gvDGfR~Da~~~i 236 (483)
T 3bh4_A 157 HFDGADWDESRKISRIFKFRGEGKAWDWEVSSENGNYDYLMYADVDYDHPDVVAETKKWGIWYANELSLDGFRIDAAKHI 236 (483)
T ss_dssp GEEEEEEETTTTEEEEEEECSTTCCCCSSSCCTTSCCCCCSSEEECTTCHHHHHHHHHHHHHHHHHHTCCEEEETTGGGS
T ss_pred cCCCCCcccccCccccccccCCCCCcccccccccCccccccCCccccCCHHHHHHHHHHHHHHHHhcCCCEEEEechhcC
Confidence 000 00 111111 012234566799999999999999999999998899999999999999
Q ss_pred cHHHHHHHHHhc----CC-ceEEEcccCCCCCCCCCCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHhcC-chh
Q 014892 202 SAKYVKEYIEGA----RP-IFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKG-QFW 275 (416)
Q Consensus 202 ~~~~~~~~~~~~----~~-~~~vgE~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~~~-~~~ 275 (416)
+.+||+++++++ +| .+++||+|... ...+..|+...++..++||+++...+.+++.+ ...
T Consensus 237 ~~~f~~~~~~~~~~~~~~~~~~igE~~~~~--------------~~~~~~y~~~~~~~~~~fd~~~~~~~~~~~~~~~~~ 302 (483)
T 3bh4_A 237 KFSFLRDWVQAVRQATGKEMFTVAEYWQNN--------------AGKLENYLNKTSFNQSVFDVPLHFNLQAASSQGGGY 302 (483)
T ss_dssp CHHHHHHHHHHHHHHHCSCCEEEECCCCSC--------------HHHHHHHHHHTTTCSEEECHHHHHHHHHHHHTTTCS
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEEecCCC--------------hHHHHHHHhhcCCCceeecHHHHHHHHHHHhcCCcc
Confidence 999999998875 33 78999999752 24566676655455689999999999888742 222
Q ss_pred hhhhhcCCCCCccccccCcceecccCCCCCCCCCCCCCC-hhhHHHHHHHHhcCC-CeeEEecCCcCCCch-------hH
Q 014892 276 RLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFP-SNHIMEGYAYILMHP-GIPSVFYDHFYDWGD-------SI 346 (416)
Q Consensus 276 ~~~~~~~~~~~~~~~~p~~~~~fl~nHD~~R~~~~~~~~-~~~~~~a~a~llt~p-GiP~Iy~G~E~gw~~-------~l 346 (416)
.+.+.+.. .+....|..+++|++|||++|+.+..... .+..++|++++|++| |+|+||||+|+|... ++
T Consensus 303 ~l~~~~~~--~~~~~~~~~~~~f~~nHD~~r~~~~~~~~~~~~~~~a~a~~l~~~~G~P~iy~G~E~g~~g~~~~~~~~~ 380 (483)
T 3bh4_A 303 DMRRLLDG--TVVSRHPEKAVTFVENHDTQPGQSLESTVQTWFKPLAYAFILTRESGYPQVFYGDMYGTKGTSPKEIPSL 380 (483)
T ss_dssp CGGGTTTT--CHHHHCGGGEEEESCCTTTSTTSTTCCCCCTTTHHHHHHHHHSSSSSEEEEEHHHHHCCCCSSTTCCCCC
T ss_pred cHHHHHhh--hhhhcCCcceeeEcccCCCCccccccccchhHHHHHHHHHHHHCCCCeEEEEehhhcCCCCCCcccchHH
Confidence 33332221 11223466789999999999998766432 234689999999997 999999999998643 68
Q ss_pred HHHHHHHHHHHHhCcccCCCCeEEEEecCCEEEEEE--C-C----EEEEEEcCCC-C-----C---CCCCCcEEeeeCC
Q 014892 347 HNQIVKLMDVRRQQDIHSRSSIKILEAQSNLYSAII--G-D----KVCMKIGDGS-W-----C---PAGKEWTLATSGH 409 (416)
Q Consensus 347 ~~~~~~Li~lR~~~~~l~~G~~~~~~~~~~~~~~~R--~-~----~~lvvinn~~-~-----~---~~~~~~~~~ls~~ 409 (416)
+++|++|++||+++ +.|.++.+..++++++|.| + + .++||+||.+ . . +.++.|++++++.
T Consensus 381 ~~~~~~Li~lR~~~---~~g~~~~~~~~~~~~af~R~~~~~~~~~~~~vvi~N~~~~~~~~~~~~~~~~~~~~d~l~~~ 456 (483)
T 3bh4_A 381 KDNIEPILKARKEY---AYGPQHDYIDHPDVIGWTREGDSSAAKSGLAALITDGPGGSKRMYAGLKNAGETWYDITGNR 456 (483)
T ss_dssp HHHHHHHHHHHHHT---CCSCEEEECCSSSEEEEEECCCTTSTTCCEEEEEESSCCEEEEEECCGGGTTCEEEETTSSC
T ss_pred HHHHHHHHHHHHHh---ccCCceEeeCCCCEEEEEEECCCCCCCCCEEEEEECCCCCcEEEEecCcCCCCeEEeccCCC
Confidence 99999999999995 7888888877778999998 2 2 4677766633 1 1 1346688877653
|
| >1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-65 Score=527.54 Aligned_cols=360 Identities=24% Similarity=0.393 Sum_probs=273.3
Q ss_pred ccCceeEEEeeecCCCCC-CcHHHHHhhhhhHHHcCCCEEEeCCCCCCC--CCCCcccccCCC---------CCCCCCCH
Q 014892 25 RNGREILFQGFNWESCKH-DWWRNLERKVPDISKSGFTSVWLPPATHSF--APEGYLPQNLYS---------LNSSYGSE 92 (416)
Q Consensus 25 ~~~~~~~~q~f~~~~~~~-G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~--~~~GY~~~d~~~---------id~~~Gt~ 92 (416)
+.+++||||+|+|+.+.+ |+|+||+++|||||+||||+||||||+++. .+|||++.|||+ |+|+|||+
T Consensus 2 ~~~~~v~~q~F~W~~~~~gG~~~gi~~~LdyLk~LGvt~IwL~Pi~~~~~~~~~GY~~~dy~~l~~f~~~~~idp~~Gt~ 81 (515)
T 1hvx_A 2 APFNGTMMQYFEWYLPDDGTLWTKVANEANNLSSLGITALWLPPAYKGTSRSDVGYGVYDLYDLGEFNQKGAVRTKYGTK 81 (515)
T ss_dssp CCCCCCEEECCCTTCCSSSCHHHHHHHHHHHHHHTTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCH
T ss_pred CCCCceEEEEEEccCCCCCCcHHHHHHHHHHHHhcCCCEEEeCCcccCCCCCCCCcCeecccccccccccCccCCCCCCH
Confidence 356789999999998875 799999999999999999999999999954 589999999997 99999999
Q ss_pred HHHHHHHHHHHHCCCEEEEEEccccCcC--CCCCCC-------------------------------CcccccCCCCCCC
Q 014892 93 HLLKALLHKMKQHKVRAMADIVINHRVG--TTQGHG-------------------------------GKYNRYDGIPLSW 139 (416)
Q Consensus 93 ~d~~~Lv~~aH~~Gi~VilD~V~NH~~~--~~~~~~-------------------------------~~~~~f~~~~~~~ 139 (416)
+||++||++||++||+||||+|+||++. .++|+. +.|..+ .|
T Consensus 82 ~dfk~Lv~~aH~~Gi~VilD~V~NH~~~~d~~~~f~~~~~~~~~~~~~~g~~~~~~~~~~~~~pg~~~~y~~~-----~~ 156 (515)
T 1hvx_A 82 AQYLQAIQAAHAAGMQVYADVVFDHKGGADGTEWVDAVEVNPSDRNQEISGTYQIQAWTKFDFPGRGNTYSSF-----KW 156 (515)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCSEECCCSEEEEEEEEEEETTEEEEECSCCEEEEEEEEBCCTTTTTSSCCC-----CB
T ss_pred HHHHHHHHHHHHCCCEEEEEEecCCccCCCcccceeEEEecCcccccccccccccccccccccCCCCCccccC-----cc
Confidence 9999999999999999999999999974 333321 111110 01
Q ss_pred CCCcee--c----------C-----CCCCCC----CCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEeccc
Q 014892 140 DEHAVT--S----------C-----TGGLGN----GSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFA 198 (416)
Q Consensus 140 ~~~~~~--~----------~-----~~~~~~----~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a 198 (416)
+..++. . + ...|.. ....+.+..+||||++||+||++|++++++|++++||||||||+|
T Consensus 157 ~~~~~~~~d~~~~~~~~~~~~~~g~~~~W~~~~~~~~~~~~~~~~~dLn~~np~V~~~l~~~~~~w~~~~gvDGfRlDaa 236 (515)
T 1hvx_A 157 RWYHFDGVDWDESRKLSRIYKFRGIGKAWDWEVDTENGNYDYLMYADLDMDHPEVVTELKSWGKWYVNTTNIDGFRLDAV 236 (515)
T ss_dssp CGGGEEEEEEETTTTEEEEEEECSTTCCCCSSCCCTTSCCCCCSSEEECTTCHHHHHHHHHHHHHHHHHHCCCEEEETTG
T ss_pred cccccCCCCccccccccccccccCCCCCcccccccccCccccccCCccCCCCHHHHHHHHHHHHHHHHhcCCCEEEEehh
Confidence 100000 0 0 111211 012234556799999999999999999999998899999999999
Q ss_pred CCCcHHHHHHHHHhc----CC-ceEEEcccCCCCCCCCCCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHhcC-
Q 014892 199 RGYSAKYVKEYIEGA----RP-IFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKG- 272 (416)
Q Consensus 199 ~~~~~~~~~~~~~~~----~~-~~~vgE~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~~~- 272 (416)
++++.+||+++++++ +| .+++||+|... ...+..|+...++..++||+++...+.+++.+
T Consensus 237 ~~i~~~f~~~~~~~v~~~~~~~~~~igE~~~~~--------------~~~~~~y~~~~~~~~~~fd~~~~~~~~~~~~~~ 302 (515)
T 1hvx_A 237 KHIKFSFFPDWLSYVRSQTGKPLFTVGEYWSYD--------------INKLHNYIMKTNGTMSLFDAPLHNKFYTASKSG 302 (515)
T ss_dssp GGSCTTHHHHHHHHHHHHHCCCCEEEECCCCSC--------------HHHHHHHHHHTTTCSEEECHHHHHHHHHHHHTT
T ss_pred hhcCHHHHHHHHHHHHhhcCCCcEEEEEecCCC--------------hHHHHHHHhccCCcceeecHHHHHHHHHHHhcC
Confidence 999999999998875 34 78999999762 34556676655456689999999999888743
Q ss_pred chhhhhhhcCCCCCccccccCcceecccCCCCCCCCCCCCCC-hhhHHHHHHHHhcCC-CeeEEecCCcCCCc----hhH
Q 014892 273 QFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFP-SNHIMEGYAYILMHP-GIPSVFYDHFYDWG----DSI 346 (416)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~p~~~~~fl~nHD~~R~~~~~~~~-~~~~~~a~a~llt~p-GiP~Iy~G~E~gw~----~~l 346 (416)
....+.+.+.. .+....|..+++|++|||++|+.+..... .+..++|++++|++| |+|+||||+|+|.. .++
T Consensus 303 ~~~~l~~~~~~--~~~~~~~~~~~~fl~nHD~~r~~s~~~~~~~~~~~la~a~~l~~~~G~P~iyyG~E~G~~~~~d~~~ 380 (515)
T 1hvx_A 303 GTFDMRTLMTN--TLMKDQPTLAVTFVDNHDTEPGQALQSWVDPWFKPLAYAFILTRQEGYPCVFYGDYYGIPQYNIPSL 380 (515)
T ss_dssp TCSCGGGTTTT--CHHHHCGGGEEEESCCTTTSTTSTTCCCCCTTTHHHHHHHHHHSSSSEEEEEHHHHHCBGGGTBCCC
T ss_pred CchhHHHHHHh--hHhhcCCccceEEeccccCCcchhcccchhhHHHHHHHHHHHhCCCCceEEEeccccCCCCCCCchH
Confidence 22233332221 11123456779999999999998766432 335789999999997 99999999999874 368
Q ss_pred HHHHHHHHHHHHhCcccCCCCeEEEEecCCEEEEEE---CC----EEEEEEcCCC-C-----C---CCCCCcEEeeeC
Q 014892 347 HNQIVKLMDVRRQQDIHSRSSIKILEAQSNLYSAII---GD----KVCMKIGDGS-W-----C---PAGKEWTLATSG 408 (416)
Q Consensus 347 ~~~~~~Li~lR~~~~~l~~G~~~~~~~~~~~~~~~R---~~----~~lvvinn~~-~-----~---~~~~~~~~~ls~ 408 (416)
.++|++|++||+++ +.|.++.+..++++++|.| ++ .++||++|.+ . . +.++.|++++++
T Consensus 381 ~~~~~~L~~lR~~~---~~g~~~~~~~~~~~~af~R~~~~~~~~~~~vvvi~N~~~~~~~~~~~~~~~~~~~~dll~~ 455 (515)
T 1hvx_A 381 KSKIDPLLIARRDY---AYGTQHDYLDHSDIIGWTREGVTEKPGSGLAALITDGPGGSKWMYVGKQHAGKVFYDLTGN 455 (515)
T ss_dssp HHHHHHHHHHHHHT---CCSCEEEECCSSSEEEEEECCBTTBTTCCEEEEEESSSCEEEEEECCGGGTTCEEEETTSS
T ss_pred HHHHHHHHHHHHHh---ccCCceeEecCCCEEEEEEECCCCCCCCCEEEEEECCCCCcEEEEecCcCCCCeEEECcCC
Confidence 99999999999994 7899988877778999998 22 4677766632 1 1 134668887765
|
| >1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-65 Score=521.20 Aligned_cols=365 Identities=24% Similarity=0.426 Sum_probs=271.5
Q ss_pred cCceeEEEeeecCCCCC-CcHHHHHhhhhhHHHcCCCEEEeCCCCCCC--CCCCcccccCCC---------CCCCCCCHH
Q 014892 26 NGREILFQGFNWESCKH-DWWRNLERKVPDISKSGFTSVWLPPATHSF--APEGYLPQNLYS---------LNSSYGSEH 93 (416)
Q Consensus 26 ~~~~~~~q~f~~~~~~~-G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~--~~~GY~~~d~~~---------id~~~Gt~~ 93 (416)
+.++||||+|.|+++.+ |+|+||+++|||||+||||+||||||+++. .+|||+|.||++ |+|+|||++
T Consensus 4 ~~~~vi~q~f~w~~~~~gG~~~gi~~~LdyL~~LGvt~IwL~Pi~~~~~~~~~GY~~~dy~~~~~~~q~~~idp~~Gt~~ 83 (485)
T 1wpc_A 4 GTNGTMMQYFEWYLPNDGNHWNRLNSDASNLKSKGITAVWIPPAWKGASQNDVGYGAYDLYDLGEFNQKGTVRTKYGTRS 83 (485)
T ss_dssp -CCCCEEECCCTTCCSSSCHHHHHHHHHHHHHHHTCCEEEECCCSEESSTTCCSCSEEETTCSSCSCBTTBSSCSSCCHH
T ss_pred CCCceEEEEEecCCCCCCCcHHHHHHHHHHHHHcCCCEEEeCCcccCCCCCCCCCCeecccccccccccCccCCCCCCHH
Confidence 34689999999998765 699999999999999999999999999954 689999999995 999999999
Q ss_pred HHHHHHHHHHHCCCEEEEEEccccCcC--CCCCCC-------------------------------Cccccc-----CCC
Q 014892 94 LLKALLHKMKQHKVRAMADIVINHRVG--TTQGHG-------------------------------GKYNRY-----DGI 135 (416)
Q Consensus 94 d~~~Lv~~aH~~Gi~VilD~V~NH~~~--~~~~~~-------------------------------~~~~~f-----~~~ 135 (416)
||++||++||++||+||||+|+||++. .++|+. +.|..+ .-.
T Consensus 84 df~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~f~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~y~~~~~~~~~~~ 163 (485)
T 1wpc_A 84 QLQAAVTSLKNNGIQVYGDVVMNHKGGADATEMVRAVEVNPNNRNQEVTGEYTIEAWTRFDFPGRGNTHSSFKWRWYHFD 163 (485)
T ss_dssp HHHHHHHHHHHTTCEEEEEECCSEECSCSEEEEEEEEEEETTEEEEECSCCEEEEEEEEBCCTTTTTSSCCCCBCGGGEE
T ss_pred HHHHHHHHHHHCCCEEEEEEeccccCCCCcCcceeEEeeCccccccccccccccccccccCCCCCCCccccCccccccCC
Confidence 999999999999999999999999974 444321 111110 000
Q ss_pred CCCCCCC-----ceecC---CCCCCC----CCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcH
Q 014892 136 PLSWDEH-----AVTSC---TGGLGN----GSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSA 203 (416)
Q Consensus 136 ~~~~~~~-----~~~~~---~~~~~~----~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~ 203 (416)
..+|.+. ..+.. ...|.. ....+.+..+||||++||+||++|++++++|++++||||||||+|++++.
T Consensus 164 ~~d~~~~~~~~~~~~~~~g~~~~W~~~~~~~~~~~~~~~~~dln~~np~V~~~l~~~~~~w~~~~gvDGfR~Da~~~i~~ 243 (485)
T 1wpc_A 164 GVDWDQSRRLNNRIYKFRGHGKAWDWEVDTENGNYDYLMYADIDMDHPEVVNELRNWGVWYTNTLGLDGFRIDAVKHIKY 243 (485)
T ss_dssp EESCCTTTCCSSCEEEECSTTCCCCSSCCCTTSCCCCCSSEEECTTCHHHHHHHHHHHHHHHHHHTCSEEEETTGGGSCH
T ss_pred CCCcccccccccceeeecCCCCCcccccccccCCccccccCccccCCHHHHHHHHHHHHHHHHhCCCCEEEhHhhhcCCH
Confidence 0011100 00000 011110 01123455679999999999999999999999889999999999999999
Q ss_pred HHHHHHHHhcC----C-ceEEEcccCCCCCCCCCCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHhcC-chhhh
Q 014892 204 KYVKEYIEGAR----P-IFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKG-QFWRL 277 (416)
Q Consensus 204 ~~~~~~~~~~~----~-~~~vgE~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~~~-~~~~~ 277 (416)
+||++++++++ | .+++||+|... ...+..|+...++..+.|||++...+.+++.+ ....+
T Consensus 244 ~f~~~~~~~~~~~~~~~~~~igE~~~~~--------------~~~~~~y~~~~~~~~~~fd~~~~~~~~~~~~~~~~~~l 309 (485)
T 1wpc_A 244 SFTRDWINHVRSATGKNMFAVAEFWKND--------------LGAIENYLQKTNWNHSVFDVPLHYNLYNASKSGGNYDM 309 (485)
T ss_dssp HHHHHHHHHHHHHHTCCCEEEECCCCSC--------------HHHHHHHHHHTTTCSEEECHHHHHHHHHHHTTTTCSCG
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEeccCC--------------hHHHHHHHhhcCCcceeeCHHHHHHHHHHHccCCcccH
Confidence 99999988753 3 78999999752 24555676654445678999999999888743 22233
Q ss_pred hhhcCCCCCccccccCcceecccCCCCCCCCCCCCCC-hhhHHHHHHHHhcCC-CeeEEecCCcCCCc----hhHHHHHH
Q 014892 278 RDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFP-SNHIMEGYAYILMHP-GIPSVFYDHFYDWG----DSIHNQIV 351 (416)
Q Consensus 278 ~~~~~~~~~~~~~~p~~~~~fl~nHD~~R~~~~~~~~-~~~~~~a~a~llt~p-GiP~Iy~G~E~gw~----~~l~~~~~ 351 (416)
.+.+.. .+....|..+++|++|||++|+.+..... ..+.++|++++|++| |+|+||||+|+|.. .++.++||
T Consensus 310 ~~~~~~--~~~~~~~~~~~~f~~nHD~~r~~~~~~~~~~~~~~~a~a~~l~~~~G~P~iy~G~E~g~~~~~d~~~~~~~~ 387 (485)
T 1wpc_A 310 RNIFNG--TVVQRHPSHAVTFVDNHDSQPEEALESFVEEWFKPLAYALTLTREQGYPSVFYGDYYGIPTHGVPAMRSKID 387 (485)
T ss_dssp GGTTTT--CHHHHCGGGEEECSCCTTTSTTSTTCCCCCTTTHHHHHHHHHSSSSSEEEEEHHHHHCBGGGTBCCCHHHHH
T ss_pred HHHHhh--hhcccCCCcceEEeccCCCCccccccccchhHHHHHHHHHHHhCCCCeeEEEeccccCcCCCCCccHHHHHH
Confidence 332221 11123456779999999999998766432 234689999999997 99999999999875 36899999
Q ss_pred HHHHHHHhCcccCCCCeEEEEecCCEEEEEE--C-C----EEEEEEcC-CCC-----CC---CCCCcEEeeeCC
Q 014892 352 KLMDVRRQQDIHSRSSIKILEAQSNLYSAII--G-D----KVCMKIGD-GSW-----CP---AGKEWTLATSGH 409 (416)
Q Consensus 352 ~Li~lR~~~~~l~~G~~~~~~~~~~~~~~~R--~-~----~~lvvinn-~~~-----~~---~~~~~~~~ls~~ 409 (416)
+|++||+++ +.|+++.+..++++++|.| + + .+++|++| +.. .+ .++.|++++++.
T Consensus 388 ~Li~lR~~~---~~g~~~~~~~~~~~~a~~R~~~~~~~~~~~~vv~~N~~~~~~~~~~~~~~~~~~~~d~l~~~ 458 (485)
T 1wpc_A 388 PILEARQKY---AYGKQNDYLDHHNIIGWTREGNTAHPNSGLATIMSDGAGGSKWMFVGRNKAGQVWSDITGNR 458 (485)
T ss_dssp HHHHHHHHT---CCSCEEEECCSSSEEEEEECCCTTSTTCCEEEEEESSSCEEEEEECCGGGTTCEEEETTSSS
T ss_pred HHHHHHHHh---ccCCcceeecCCCEEEEEEECCCCCCCCCEEEEEECCCCCcEEEEecCCCCCceEEeccCCC
Confidence 999999996 6888888877778999998 2 2 46666555 321 11 346688887753
|
| >1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-65 Score=516.59 Aligned_cols=334 Identities=25% Similarity=0.499 Sum_probs=261.5
Q ss_pred CceeEEEeeecCCCCCCc-HHHHHhhhhhHHHcCCCEEEeCCCCCCCC---CCCcccccCC---------CCCCCCCCHH
Q 014892 27 GREILFQGFNWESCKHDW-WRNLERKVPDISKSGFTSVWLPPATHSFA---PEGYLPQNLY---------SLNSSYGSEH 93 (416)
Q Consensus 27 ~~~~~~q~f~~~~~~~G~-~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~---~~GY~~~d~~---------~id~~~Gt~~ 93 (416)
++++|||+|.|+++.+|| |+||+++|||||+||||+||||||+++++ +|||+|.||| +|+|+|||++
T Consensus 8 ~~~viyq~f~w~~~~~G~~~~gi~~~Ldyl~~lGvt~I~l~Pi~~~~~~~~~~gY~~~dy~~lg~~~~~~~id~~~Gt~~ 87 (435)
T 1mxg_A 8 EGGVIMQAFYWDVPGGGIWWDHIRSKIPEWYEAGISAIWLPPPSKGMSGGYSMGYDPYDYFDLGEYYQKGTVETRFGSKE 87 (435)
T ss_dssp GTCCEEECCCTTCCCSSCHHHHHHHHHHHHHHHTCCEEECCCCSEETTGGGCCSSSEEETTCSSCSCBTTBSSCSSCCHH
T ss_pred CCcEEEEEEEeccCCCCCHHHHHHHHHHHHHHcCCCEEEeCCcccCCCCCCCCCcCcccccccccccccCcCCCCCCCHH
Confidence 568999999999999999 99999999999999999999999999875 5899999999 5999999999
Q ss_pred HHHHHHHHHHHCCCEEEEEEccccCcCCCCCCC---Cc--ccccCCC---CCCCCCCceecCCCCCCCCCCCCCCCCCCc
Q 014892 94 LLKALLHKMKQHKVRAMADIVINHRVGTTQGHG---GK--YNRYDGI---PLSWDEHAVTSCTGGLGNGSTGDNFHGVPN 165 (416)
Q Consensus 94 d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~---~~--~~~f~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 165 (416)
||++||++||++||+||||+|+||++.++++.. +. |..|... ...+.... +............+.++||
T Consensus 88 df~~lv~~~H~~Gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---f~~~~~~~~~~g~~~~~~d 164 (435)
T 1mxg_A 88 ELVRLIQTAHAYGIKVIADVVINHRAGGDLEWNPFVGDYTWTDFSKVASGKYTANYLD---FHPNELHCCDEGTFGGFPD 164 (435)
T ss_dssp HHHHHHHHHHHTTCEEEEEECCSBCCCCEEEEETTTTEEEEEECTTCTTCCSCCCGGG---BSSSSSCSCCSCCCTTSCB
T ss_pred HHHHHHHHHHHCCCEEEEEECcccccCCCcccCCCCCccccccCCCccCCCCcccccc---CCCCCcCccCCCcccCccc
Confidence 999999999999999999999999999764211 11 1122210 00000000 0000000011123678999
Q ss_pred CCCCCHHHHHHH----HHHHHHHHHhcCCCeEEecccCCCcHHHHHHHHHhcCCceEEEcccCCCCCCCCCCCCccchhh
Q 014892 166 IDHTQHFVRKDI----IAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGARPIFSVGEYWDSCNYNSHGLDYNQDSHR 241 (416)
Q Consensus 166 ln~~~~~v~~~l----~~~~~~w~~~~gvDGfRlD~a~~~~~~~~~~~~~~~~~~~~vgE~~~~~~~~~~~~~~~~~~~~ 241 (416)
||++||+||++| .++++||+ ++||||||+|+|++++.+||++++++++ .+++||+|... .
T Consensus 165 ln~~np~V~~~l~~~~~~~~~~w~-~~gvDGfR~Da~~~i~~~f~~~~~~~~~-~~~vgE~~~~~--------------~ 228 (435)
T 1mxg_A 165 ICHHKEWDQYWLWKSNESYAAYLR-SIGFDGWRFDYVKGYGAWVVRDWLNWWG-GWAVGEYWDTN--------------V 228 (435)
T ss_dssp BCTTSHHHHHHHTSSTTSHHHHHH-HTTCCEEEETTGGGSCHHHHHHHHHHHC-CCEEECCCCSC--------------H
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHH-HCCCCEEEhhhhhhccHHHHHHHHHhcC-ceEEEccccCC--------------h
Confidence 999999999665 68999999 6999999999999999999999998874 78999999763 2
Q ss_pred HhHhhhhccCCCcccccCchhhHHHHHHhcCc-hhhhhhhcCCCCCccccccCcceecccCCCCCCCCCCCCCChhhHHH
Q 014892 242 QRIINWIDGTGQLSAAFDFTTKGILQEAVKGQ-FWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFPSNHIME 320 (416)
Q Consensus 242 ~~l~~~~~~~~~~~~~fdf~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~fl~nHD~~R~~~~~~~~~~~~~~ 320 (416)
+.+..|+...+ .++|||+++..+.+++.+. ..++..............|..+++|++|||++|+.. .++
T Consensus 229 ~~~~~~~~~~~--~~~fd~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~nHD~~r~~~--------~~~ 298 (435)
T 1mxg_A 229 DALLSWAYESG--AKVFDFPLYYKMDEAFDNNNIPALVYALQNGQTVVSRDPFKAVTFVANHDTDIIWN--------KYP 298 (435)
T ss_dssp HHHHHHHHHHT--SEEECHHHHHHHHHHHTTTCHHHHHHHHHTTCSSTTTCTTTEEEESCCSSCCCCSC--------HHH
T ss_pred HHHHhhhccCC--CceeehHHHHHHHHHHhcCCHHHHHHHHhccccccccCHHHhhhhcccCCccchhh--------HHH
Confidence 44666665432 7899999999999988543 333433322111122235668899999999998641 278
Q ss_pred HHHHHhcCCCeeEEecCCcCCCchhHHHHHHHHHHHHHhCcccCCCCeEEEEecCCEEEEEE-C----CEEEEEEcCCC
Q 014892 321 GYAYILMHPGIPSVFYDHFYDWGDSIHNQIVKLMDVRRQQDIHSRSSIKILEAQSNLYSAII-G----DKVCMKIGDGS 394 (416)
Q Consensus 321 a~a~llt~pGiP~Iy~G~E~gw~~~l~~~~~~Li~lR~~~~~l~~G~~~~~~~~~~~~~~~R-~----~~~lvvinn~~ 394 (416)
|++++||+||+|+||||+|++|. +.++|++|+++|+ +|+.|+++.+..++++++|.| + +.++|++|+++
T Consensus 299 a~a~~lt~~G~P~iyyG~e~~~~--~~~~i~~L~~~r~---al~~g~~~~~~~~~~~~~~~R~~~~~~~~~~vv~N~~~ 372 (435)
T 1mxg_A 299 AYAFILTYEGQPVIFYRDFEEWL--NKDKLINLIWIHD---HLAGGSTTIVYYDNDELIFVRNGDSRRPGLITYINLSP 372 (435)
T ss_dssp HHHHHHHSSSEEEEEHHHHHTTS--CHHHHHHHHHHHH---HTCCSCEEEEEECSSEEEEEECCCSSCCCEEEEEECSS
T ss_pred HHHHHHcCCCccEEEecccccch--HHHHHHHHHHHHH---HhccCCeEEEecCCCEEEEEEeCCCCCCEEEEEEeCCC
Confidence 99999999999999999999987 8999999999997 578999999998889999988 2 36888899864
|
| >1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-65 Score=536.05 Aligned_cols=364 Identities=16% Similarity=0.267 Sum_probs=277.6
Q ss_pred eeccCceeEEEeeecCCC------------------------CCCcHHHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCcc
Q 014892 23 VIRNGREILFQGFNWESC------------------------KHDWWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYL 78 (416)
Q Consensus 23 ~~~~~~~~~~q~f~~~~~------------------------~~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~ 78 (416)
+-|..+.||||+|.++++ ..|||+||+++|||||+||||+||||||++++++|||+
T Consensus 129 ~~W~~~~viYqi~~~~F~~~~~~~~~~~~~~w~~~~~~~~~~~~G~~~gi~~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd 208 (588)
T 1j0h_A 129 PDWVKDTVWYQIFPERFANGNPSISPEGSRPWGSEDPTPTSFFGGDLQGIIDHLDYLVDLGITGIYLTPIFRSPSNHKYD 208 (588)
T ss_dssp CGGGGGCCEEEECGGGTCCSCGGGSCTTCCCTTSSCCCSSCCCCCCHHHHHHTHHHHHHHTCCEEEECCCEECSSSSCCS
T ss_pred CccccccEEEEEcchhhcCCCCCcCcccccccCCCCCcccccCCCCHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCcC
Confidence 344567999999976552 13799999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccccCcCCCCCC--------CCcccccCCCCCCCCCCceecCCCC
Q 014892 79 PQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGH--------GGKYNRYDGIPLSWDEHAVTSCTGG 150 (416)
Q Consensus 79 ~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~--------~~~~~~f~~~~~~~~~~~~~~~~~~ 150 (416)
|.|||+|+|+|||++||++||++||++||+||||+|+||++.+++++ .+.|..| +.|........+.+
T Consensus 209 ~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~~~~~~f~~~~~~g~~s~y~dw----y~~~~~~~~~~~~~ 284 (588)
T 1j0h_A 209 TADYFEVDPHFGDKETLKTLIDRCHEKGIRVMLDAVFNHCGYEFAPFQDVWKNGESSKYKDW----FHIHEFPLQTEPRP 284 (588)
T ss_dssp CSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTCHHHHHHHHHGGGCTTGGG----BCBSSSSCCCSSSC
T ss_pred ccccCccCccCCCHHHHHHHHHHHHHCCCEEEEEECcCcCcccchhHHHHHhcCCCCCcccc----cccccCCCCCCCCC
Confidence 99999999999999999999999999999999999999999988743 2223211 01111100000011
Q ss_pred CCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcHHHHHHHHHhcC---C-ceEEEcccCCC
Q 014892 151 LGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGAR---P-IFSVGEYWDSC 226 (416)
Q Consensus 151 ~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~~~~~~~~~~~~---~-~~~vgE~~~~~ 226 (416)
.. ........+|+||++||+||++|++++++|++++||||||+|+|++++.+||++++++++ | .+++||+|...
T Consensus 285 ~y--~~~~~~~~~pdLn~~np~Vr~~l~~~~~~Wl~~~giDGfR~D~a~~~~~~f~~~~~~~v~~~~p~~~~igE~~~~~ 362 (588)
T 1j0h_A 285 NY--DTFAFVPQMPKLNTANPEVKRYLLDVATYWIREFDIDGWRLDVANEIDHEFWREFRQEVKALKPDVYILGEIWHDA 362 (588)
T ss_dssp SB--CBSTTCTTSBBBCTTSHHHHHHHHHHHHHHHHHHCCCEEEETTGGGSCHHHHHHHHHHHHHHCTTCEEEECCSSCC
T ss_pred Ce--EEecCCCCccccccCCHHHHHHHHHHHHHHHHhcCCcEEEEeccccCCHHHHHHHHHHHHHhCCCeEEEEEecCch
Confidence 11 111224679999999999999999999999999999999999999999999999988764 4 78999999752
Q ss_pred CCCCCCCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHhc-Cc--hhhhhhhcCCCCCcccc-ccCcceecccCC
Q 014892 227 NYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVK-GQ--FWRLRDAQGKPPGVMGW-WPSRAVTFLDNH 302 (416)
Q Consensus 227 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~~-~~--~~~~~~~~~~~~~~~~~-~p~~~~~fl~nH 302 (416)
. .|+. +.++++++++++...+...+. +. ...+...+......+.. .+...++|++||
T Consensus 363 ~------------------~~~~-g~~~d~~~n~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~y~~~~~~~~~~~~~nH 423 (588)
T 1j0h_A 363 M------------------PWLR-GDQFDAVMNYPFTDGVLRFFAKEEISARQFANQMMHVLHSYPNNVNEAAFNLLGSH 423 (588)
T ss_dssp G------------------GGCS-SSSCSEEBCHHHHHHHHHHHTSCCSCHHHHHHHHHHHHHTSCHHHHHTCBCBSCCT
T ss_pred h------------------hhhc-CCCcCEEEChHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcccchhhhheeecCCC
Confidence 1 2332 235788999998888888763 22 22222211100000100 112458999999
Q ss_pred CCCCCCCCCCCChhhHHHHHHHHhcCCCeeEEecCCcCC--------------Cc-----hhHHHHHHHHHHHHHhCccc
Q 014892 303 DTGSTQAHWPFPSNHIMEGYAYILMHPGIPSVFYDHFYD--------------WG-----DSIHNQIVKLMDVRRQQDIH 363 (416)
Q Consensus 303 D~~R~~~~~~~~~~~~~~a~a~llt~pGiP~Iy~G~E~g--------------w~-----~~l~~~~~~Li~lR~~~~~l 363 (416)
|++|+.+.++.+.+++++|++++||+||+|+||||+|+| |+ .++++++|+|++|||++|+|
T Consensus 424 D~~r~~~~~~~~~~~~~~a~~~~~~~pG~P~iy~G~E~g~~~~~dp~~r~~~~W~~~~~~~~l~~~~~~Li~lRk~~~al 503 (588)
T 1j0h_A 424 DTSRILTVCGGDIRKVKLLFLFQLTFTGSPCIYYGDEIGMTGGNDPECRKCMVWDPMQQNKELHQHVKQLIALRKQYRSL 503 (588)
T ss_dssp TSCCHHHHTTTCHHHHHHHHHHHHHSSSCCEEETTGGGTCCCCSTTGGGCCCCCCTTTSCHHHHHHHHHHHHHHHHCHHH
T ss_pred CCchhhhhcCCcHHHHHHHHHHHHhCCCCcEEEeecccCccCCCCccccCCcCCCCCCCcHHHHHHHHHHHHHHhhCHHH
Confidence 999998877656778999999999999999999999985 43 37999999999999999999
Q ss_pred CCCCeEEEEe--cCCEEEEEE---CCEEEEEEcCCCCC-----CC---CCCcEEeeeCCce
Q 014892 364 SRSSIKILEA--QSNLYSAII---GDKVCMKIGDGSWC-----PA---GKEWTLATSGHKY 411 (416)
Q Consensus 364 ~~G~~~~~~~--~~~~~~~~R---~~~~lvvinn~~~~-----~~---~~~~~~~ls~~~~ 411 (416)
+.|.++.+.. ++++++|.| +++++||+|++... |. ++.|++++++..+
T Consensus 504 ~~g~~~~~~~~~~~~v~a~~R~~~~~~~lvv~N~~~~~~~~~l~~~~~~~~~~~ll~~~~~ 564 (588)
T 1j0h_A 504 RRGEISFLHADDEMNYLIYKKTDGDETVLVIINRSDQKADIPIPLDARGTWLVNLLTGERF 564 (588)
T ss_dssp HHCEEEEECCSCTTTEEEEEEECSSCEEEEEEECSSSCEEEECCCCCSSEEEEETTTCCEE
T ss_pred cCCcEEEEEECCCCCEEEEEEECCCCEEEEEEECCCCCEEEecCccccCceeEEeccCcee
Confidence 9999999886 468999998 56899999986532 22 2446666665543
|
| >1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-65 Score=533.25 Aligned_cols=363 Identities=16% Similarity=0.255 Sum_probs=280.0
Q ss_pred ccCceeEEEeeecCCCC------------------------CCcHHHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCcccc
Q 014892 25 RNGREILFQGFNWESCK------------------------HDWWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQ 80 (416)
Q Consensus 25 ~~~~~~~~q~f~~~~~~------------------------~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~ 80 (416)
|..+.+|||+|.+++.. .|||+||+++|||||+||||+|||+||++++++|||+|.
T Consensus 127 W~~~~viYqi~~~~F~~~~~~~~~~~~~~w~~~~~~~~~~~~Gd~~gi~~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~ 206 (583)
T 1ea9_C 127 WVKDAIFYQIFPERFANGDTRNDPEGTLPWGSADPTPSCFFGGDLQGVIDHLDHLSKLGVNAVYFTPLFKATTNHKYDTE 206 (583)
T ss_dssp HHHHCCCCEECSTTSCCCCSCSCSSCCSCCCSSSCCCSSCCCCCHHHHHHTHHHHHHHTCSEEEECCCSSCSSSSTTSCS
T ss_pred ccccceEEEEchHHhcCCCCccCccccccccCCCCcccccCCcCHHHHHHhhHHHHHcCCCEEEECCCccCCCCCCcCcc
Confidence 34568999999877621 379999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccccCcCCCCCCC--------CcccccCCCCCCCCCCceecCCCCC-
Q 014892 81 NLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHG--------GKYNRYDGIPLSWDEHAVTSCTGGL- 151 (416)
Q Consensus 81 d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~--------~~~~~f~~~~~~~~~~~~~~~~~~~- 151 (416)
|||+|+|+|||++||++||++||++||+||||+|+||++.+++|+. +.|..| +.|..... +.++.
T Consensus 207 dy~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~~~~~~f~~~~~~g~~s~y~~~----y~~~~~~~--~~~~~~ 280 (583)
T 1ea9_C 207 DYFQIDPQFGDKDTLKKLVDLCHERGIRVLLDAVFNHSGRTFPPFVDVLKNGEKSKYKDW----FHIRSLPL--EVVDGI 280 (583)
T ss_dssp CTTCCCTTTCCHHHHHHHHHHHTTTTCEEEEECCCSBCCTTTHHHHHHHTTTTTCTTTTS----SCBCSSSC--CCTTSC
T ss_pred cccccCcccCCHHHHHHHHHHHHHCCCEEEEEEccccCCCccHHHHHHHhcCCCCCccCc----eEecCCCC--CCCCCC
Confidence 9999999999999999999999999999999999999999887532 222111 11111100 01110
Q ss_pred CCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcHHHHHHHHHhcC---C-ceEEEcccCCCC
Q 014892 152 GNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGAR---P-IFSVGEYWDSCN 227 (416)
Q Consensus 152 ~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~~~~~~~~~~~~---~-~~~vgE~~~~~~ 227 (416)
.+.........+|+||++||+||++|++++++|++++||||||+|+|++++.+||++++++++ | .+++||+|....
T Consensus 281 ~~y~~~~~~~~~pdln~~~p~Vr~~l~~~~~~W~~~~gvDGfR~D~~~~~~~~f~~~~~~~v~~~~p~~~~igE~~~~~~ 360 (583)
T 1ea9_C 281 PTYDTFAFEPLMPKLNTEHPDVKEYLLKAAEYWIRETGIDGWRLDVANEVSHQFWREFRRVVKQANPDAYILGEVWHESS 360 (583)
T ss_dssp CSBCBSSSCTTSBBCCTTSHHHHHHHHHHHHHHHHHHCCSEEEETTCTTSCHHHHHHHHHHHHHHCTTCEEEECCCSCCT
T ss_pred CCceecCCCCCcceeccCCHHHHHHHHHHHHHHHHhcCceEEEecccccCCHHHHHHHHHHHHhhCCCeEEEEEEcCChH
Confidence 011111234679999999999999999999999999999999999999999999999988764 5 789999997521
Q ss_pred CCCCCCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHhcCc---hhhhhhhcCCCCCccc-cccCcceecccCCC
Q 014892 228 YNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKGQ---FWRLRDAQGKPPGVMG-WWPSRAVTFLDNHD 303 (416)
Q Consensus 228 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~-~~p~~~~~fl~nHD 303 (416)
.|+. ..+++++|++++...+...+.+. ...+.+.+......+. ..+..+++|++|||
T Consensus 361 ------------------~~~~-~~~~d~~~n~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~nHD 421 (583)
T 1ea9_C 361 ------------------IWLE-GDQFDAVMNYPFTNAVLDFFIHQIADAEKFSFMLGKQLAGYPRQASEVMFNLLDSHD 421 (583)
T ss_dssp ------------------TTTT-TTSCSEEBCHHHHHHHHHHTTSCCSCHHHHHHHHHHTTTTSCHHHHHTCEECSCCTT
T ss_pred ------------------HHhc-CCCcCEEECHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHcchhhhhhheeecCCCC
Confidence 1222 23467889999888888877442 2222222211101111 01224589999999
Q ss_pred CCCCCCCCCCChhhHHHHHHHHhcCCCeeEEecCCcCC--------------Cc-----hhHHHHHHHHHHHHHhCcccC
Q 014892 304 TGSTQAHWPFPSNHIMEGYAYILMHPGIPSVFYDHFYD--------------WG-----DSIHNQIVKLMDVRRQQDIHS 364 (416)
Q Consensus 304 ~~R~~~~~~~~~~~~~~a~a~llt~pGiP~Iy~G~E~g--------------w~-----~~l~~~~~~Li~lR~~~~~l~ 364 (416)
++|+.+.++.+.+++++|++++||+||+|+||||+|+| |+ .++++++|+|++|||++|+|+
T Consensus 422 ~~r~~~~~~~~~~~~~la~~~~~~~pG~P~iy~G~E~g~~~~~d~~~r~~~~W~~~~~~~~~~~~~~~Li~lRk~~~al~ 501 (583)
T 1ea9_C 422 TARLLTQADGDKRKMKLAVLFQFTYFGTPCIYYGDEVGLDGGHDPGCRKCMEWDETKHDKDLFAFYQTVIRLRQAHAALR 501 (583)
T ss_dssp SCCHHHHHCSCHHHHHHHHHHHTTSSSEECCCSSCSSCCCCCSHHHHTCCCCCCTTSCCHHHHHHHHHHHHHHHHCSHHH
T ss_pred chhhhhhcCCcHHHHHHHHHHHHcCCCCcEEEeccccCccCCCChhhcCCcCCCCCCCcHHHHHHHHHHHHHhhhChHhc
Confidence 99988777656678999999999999999999999985 42 379999999999999999999
Q ss_pred CCCeEEEEec--CCEEEEEE---CCEEEEEEcCCCCC-----C-CCCCcEEeeeCCceE
Q 014892 365 RSSIKILEAQ--SNLYSAII---GDKVCMKIGDGSWC-----P-AGKEWTLATSGHKYA 412 (416)
Q Consensus 365 ~G~~~~~~~~--~~~~~~~R---~~~~lvvinn~~~~-----~-~~~~~~~~ls~~~~~ 412 (416)
.|.++.+..+ +++++|.| +++++||+|++... | ..+.|++++++..+.
T Consensus 502 ~g~~~~~~~~~~~~v~af~R~~~~~~~lvv~N~~~~~~~v~lp~~~~~~~~~l~~~~~~ 560 (583)
T 1ea9_C 502 TGTFKFLTAEKNSRQIAYLREDDQDTILVVMNNDKAGHTLTLPVRHAQWTHLWQDDVLT 560 (583)
T ss_dssp HCCCCCSBCCSSCCEEEEEEECSSCEEEEEEECSSSCEEEEEECCSSSCCEEBSTTCCE
T ss_pred cCceEEEeeCCCCCEEEEEEEcCCCEEEEEEECCCCCEEEEecCCCceEEEeccCCcEE
Confidence 9999888765 78999998 47899999987543 2 225678888877654
|
| >2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-66 Score=527.92 Aligned_cols=370 Identities=19% Similarity=0.265 Sum_probs=273.5
Q ss_pred eeeccCceeEEEeeecCCCC-----------------CCcHHHHHhhhhhHHHcCCCEEEeCCCCCCC--------CCCC
Q 014892 22 AVIRNGREILFQGFNWESCK-----------------HDWWRNLERKVPDISKSGFTSVWLPPATHSF--------APEG 76 (416)
Q Consensus 22 ~~~~~~~~~~~q~f~~~~~~-----------------~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~--------~~~G 76 (416)
++.|. +.+|||+|.+.+.. .|||+||+++|||||+||||+|||+||+++. ++||
T Consensus 3 ~~~w~-~~viYqi~~~~F~~~~~~~~~~~~~~~~~~~gG~~~gi~~~LdyL~~LGv~~I~l~Pi~~~~~~~~~~~~~~~G 81 (484)
T 2aaa_A 3 AASWR-TQSIYFLLTDRFGRTDNSTTATCNTGNEIYCGGSWQGIIDHLDYIEGMGFTAIWISPITEQLPQDTADGEAYHG 81 (484)
T ss_dssp HHHHT-TCCEEECCHHHHCCTTCCSCCCCCGGGCSCCCCCHHHHHHTHHHHHTTTCCEEEECCCEEECCCCBTTBCSTTS
T ss_pred hhhhc-cCcEEEEeCccccCCCCCCCCCCCccccccCCCCHHHHHHHHHHHHhcCCCEEEeCccccCcccccccCCCCCC
Confidence 34454 47999999976532 2899999999999999999999999999864 5799
Q ss_pred cccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccccCcCCCCCCCCcccccCC--CCCCCCCCc-eecCCCCC--
Q 014892 77 YLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDG--IPLSWDEHA-VTSCTGGL-- 151 (416)
Q Consensus 77 Y~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~--~~~~~~~~~-~~~~~~~~-- 151 (416)
|++.|||+|+|+|||++|||+||++||++||+||||+|+||++.+++.....|..|.+ ....|++.+ +..+.+..
T Consensus 82 Y~~~dy~~id~~~Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (484)
T 2aaa_A 82 YWQQKIYDVNSNFGTADNLKSLSDALHARGMYLMVDVVPDHMGYAGNGNDVDYSVFDPFDSSSYFHPYCLITDWDNLTMV 161 (484)
T ss_dssp CSEEEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEEECCSBCCBSSCGGGCCGGGSBSCCSGGGBCCCCBCCCTTCHHHH
T ss_pred cCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEECcCCcCCCCCCCcccccccccCCcccccCCCCCcccCCCCccc
Confidence 9999999999999999999999999999999999999999999977632222222211 011122211 11121110
Q ss_pred CCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcHHHHHHHHHhcCCceEEEcccCCCCCCCC
Q 014892 152 GNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGARPIFSVGEYWDSCNYNSH 231 (416)
Q Consensus 152 ~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~~~~~~~~~~~~~~~~vgE~~~~~~~~~~ 231 (416)
..++.+++...+||||++||+||++|++++++|++++||||||||+|++++.+||++++++. +.+++||+|...
T Consensus 162 ~~~w~~~~~~~~~dln~~np~v~~~l~~~~~~w~~~~gvDGfR~D~~~~i~~~f~~~~~~~~-~~~~igE~~~~~----- 235 (484)
T 2aaa_A 162 EDCWEGDTIVSLPDLDTTETAVRTIWYDWVADLVSNYSVDGLRIDSVLEVQPDFFPGYNKAS-GVYCVGEIDNGN----- 235 (484)
T ss_dssp HHSBEECSSSEECBBCTTSHHHHHHHHHHHHHHHHHHTCCEEEESCSTTSCGGGHHHHHHHH-TSEEEECCCCSC-----
T ss_pred cccccccCccccCccccCCHHHHHHHHHHHHHHHHhcCCCEEEecccccCCHHHHHHHHhcC-CcEEEecCCCCC-----
Confidence 01222333467999999999999999999999998899999999999999999999998873 478999999752
Q ss_pred CCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHhc---CchhhhhhhcCCCCCccccccCcceecccCCCCCCCC
Q 014892 232 GLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVK---GQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQ 308 (416)
Q Consensus 232 ~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~p~~~~~fl~nHD~~R~~ 308 (416)
...+..|. ++++++|||+++..+..++. ++...+.+.+......+ ..+...++|++|||++|+.
T Consensus 236 ---------~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~f~~nHD~~r~~ 302 (484)
T 2aaa_A 236 ---------PASDCPYQ---KVLDGVLNYPIYWQLLYAFESSSGSISNLYNMIKSVASDC-SDPTLLGNFIENHDNPRFA 302 (484)
T ss_dssp ---------HHHHGGGG---GTSSEEBCHHHHHHHHHHHSSTTSCHHHHHHHHHHHHHHC-SCGGGSEECSCCTTSCCGG
T ss_pred ---------hHHHHhhc---ccCCceeccHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhC-CChhhhceeccCCCccccc
Confidence 23343443 24678999999999988875 23334433221100000 1234678999999999998
Q ss_pred CCCCCChhhHHHHHHHHhcCCCeeEEecCCcCCC-------------------chhHHHHHHHHHHHHHhCcccC----C
Q 014892 309 AHWPFPSNHIMEGYAYILMHPGIPSVFYDHFYDW-------------------GDSIHNQIVKLMDVRRQQDIHS----R 365 (416)
Q Consensus 309 ~~~~~~~~~~~~a~a~llt~pGiP~Iy~G~E~gw-------------------~~~l~~~~~~Li~lR~~~~~l~----~ 365 (416)
+... +.+++++|++++||+||+|+||||+|+|. ..+++++||+|++|||++++++ .
T Consensus 303 ~~~~-~~~~~~~a~a~~l~~~G~P~iy~G~E~g~~~~~d~~~r~~~W~~~~~~~~~l~~~~~~Li~lRk~~~~~~~~~~~ 381 (484)
T 2aaa_A 303 KYTS-DYSQAKNVLSYIFLSDGIPIVYAGEEQHYAGGKVPYNREATWLSGYDTSAELYTWIATTNAIRKLAIAADSAYIT 381 (484)
T ss_dssp GTCC-CHHHHHHHHHHHHHSSSEEEEETTTTTTCCCCTTTTTCCCGGGGTTCTTCHHHHHHHHHHHHHHHHHHHCTTTTT
T ss_pred cccC-CHHHHHHHHHHHHhcCCccEEEecccccccCCCCcchhhhccccCCCCchHHHHHHHHHHHHHHhchhhcccccc
Confidence 8764 56689999999999999999999999873 1368999999999999998764 3
Q ss_pred CCeEEEEecCCEEEEEEC---CEEEEEEcC-CCCC-------C-----CCCCcEEeeeCCceE
Q 014892 366 SSIKILEAQSNLYSAIIG---DKVCMKIGD-GSWC-------P-----AGKEWTLATSGHKYA 412 (416)
Q Consensus 366 G~~~~~~~~~~~~~~~R~---~~~lvvinn-~~~~-------~-----~~~~~~~~ls~~~~~ 412 (416)
|.++.+..++++++|.|. ++.++|++| +... | .+..|++++++..+.
T Consensus 382 ~~~~~~~~~~~~~af~R~~~~~~~~~v~~N~~~~~~~~~~~l~~~~~~~g~~~~d~l~~~~~~ 444 (484)
T 2aaa_A 382 YANDAFYTDSNTIAMAKGTSGSQVITVLSNKGSSGSSYTLTLSGSGYTSGTKLIEAYTCTSVT 444 (484)
T ss_dssp SCCEEEEEETTEEEEEESSTTTCEEEEEECSCTTCCCEEEEECCCCCCTTCEEEETTTTEEEE
T ss_pred cceeEEEeCCCEEEEEEEcCCCcEEEEEEcCCCCCceEEEeccccccCCCCEEEECCCCCEEE
Confidence 556777778899999992 355555554 3321 1 123577777665443
|
| >4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-66 Score=548.14 Aligned_cols=359 Identities=15% Similarity=0.169 Sum_probs=275.9
Q ss_pred eeccCceeEEEeeecCCC----------------------CCCcHHHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCcccc
Q 014892 23 VIRNGREILFQGFNWESC----------------------KHDWWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQ 80 (416)
Q Consensus 23 ~~~~~~~~~~q~f~~~~~----------------------~~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~ 80 (416)
+-|-.++||||+|...++ ..|||+||++||||||+||||+|||+||++++++|||+|.
T Consensus 220 p~W~~~~viYqI~p~rF~~~~~~n~~~~~~~w~~~~~~~~~gGdl~Gi~~kLdyLk~LGvt~IwL~Pi~~s~~~~GYd~~ 299 (696)
T 4aee_A 220 PRWYMGTVYYQIFIDSFDNGDPNNDPPNRIKKTVPREYGYYGGDLAGIMKHIDHLEDLGVETIYLTPIFSSTSYHRYDTI 299 (696)
T ss_dssp CCTTSSCCEEEECGGGTCCCCGGGCCSSCCCCCSSCCSSCCCCCHHHHHTTHHHHHHHTCCEEEECCCEEESSSSCCSEE
T ss_pred cchhhcCeEEEEehHHhcCCCCCCCccccccccCCcccccCCcCHHHHHHHhHHHHHcCCCEEEECCcccCCCCCCcCcc
Confidence 344456999999998765 2479999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccccCcCCCCCCC--------CcccccCCCCCCCCCCceec------
Q 014892 81 NLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHG--------GKYNRYDGIPLSWDEHAVTS------ 146 (416)
Q Consensus 81 d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~--------~~~~~f~~~~~~~~~~~~~~------ 146 (416)
||++|||+|||++||++||++||++||+||||+|+||+|.+|+|+. +.|..| +.|.+.....
T Consensus 300 Dy~~idp~~Gt~~df~~Lv~~aH~~GikVilD~V~NHts~~~~~f~~~~~~~~~s~y~dw----y~~~~~~~~~~~~~~~ 375 (696)
T 4aee_A 300 DYKSIDKYLGTMEDFEKLVQVLHSRKIKIVLDITMHHTNPCNELFVKALREGENSPYWEM----FSFLSPPPKEIVELML 375 (696)
T ss_dssp EEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECSSEECTTSHHHHHHHHHCTTSTTGGG----BCBCSCCCHHHHHHHH
T ss_pred cccccCcccCCHHHHHHHHHHHHHCCCEEEEeccccccCccCHHHHHHHhcCCCCCCCCc----eEecCCCCcccccccc
Confidence 9999999999999999999999999999999999999999997532 223211 0111110000
Q ss_pred ---CCCC---------------CCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcHHHHHH
Q 014892 147 ---CTGG---------------LGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKE 208 (416)
Q Consensus 147 ---~~~~---------------~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~~~~~~ 208 (416)
..+. ..+.....++..+||||++||+||++|++++++|+ ++||||||||+|++++.+||++
T Consensus 376 ~~~~~~~~~s~~~~~~~~~~~~~~~y~~~~~~~~~pdLN~~np~Vr~~i~~~~~~Wl-~~GvDGfRlDaa~~i~~~f~~~ 454 (696)
T 4aee_A 376 KYIDGEECRSRELYKLDYFRNNKPFYEAFFNIWLMAKFNHDNPRTVDYFIDITKFWI-DKGIDGFRIDVAMGIHYSWMKQ 454 (696)
T ss_dssp HHHSSSSCCGGGGGGSHHHHHSCCSBCBGGGCTTCEEBCTTCHHHHHHHHHHHHHHH-TTTCCEEEETTGGGSCHHHHHH
T ss_pred cccCCCccccccccccccccCCCCceeeecCCCCchhhcCCCHHHHHHHHHHHHHHH-hCCCCEEEEechhhCCHHHHHH
Confidence 0000 01111223467899999999999999999999999 9999999999999999999999
Q ss_pred HHHhcC---C-ceEEEcccCCCCCCCCCCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHhc-C--chhhhhhhc
Q 014892 209 YIEGAR---P-IFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVK-G--QFWRLRDAQ 281 (416)
Q Consensus 209 ~~~~~~---~-~~~vgE~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~~-~--~~~~~~~~~ 281 (416)
++++++ | .+++||+ +.. .|+. .++++++|+|++...+...+. + +...+...+
T Consensus 455 ~~~~v~~~~p~~~~igE~-~~~-------------------~~l~-~~~~d~~~n~~~~~~~~~~~~~~~~~~~~~~~~l 513 (696)
T 4aee_A 455 YYEYIKNTYPDFLVLGEL-AEN-------------------PRIY-MDYFDSAMNYYLRKAILELLIYKRIDLNEFISRI 513 (696)
T ss_dssp HHHHHHHHCTTCEEEECC-CSC-------------------GGGT-TTTCSEEBCHHHHHHHHHHHTSCCSCHHHHHHHH
T ss_pred HHHHHHhhCCCcEEEecc-cch-------------------hhhc-CCccceEECcHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 988764 4 7899997 321 1222 235788999999888888773 2 222222222
Q ss_pred CCCCCcccccc----CcceecccCCCCCCCCCCCCCChhhHHHHHHHHhcCCCeeEEecCCcCC--------------Cc
Q 014892 282 GKPPGVMGWWP----SRAVTFLDNHDTGSTQAHWPFPSNHIMEGYAYILMHPGIPSVFYDHFYD--------------WG 343 (416)
Q Consensus 282 ~~~~~~~~~~p----~~~~~fl~nHD~~R~~~~~~~~~~~~~~a~a~llt~pGiP~Iy~G~E~g--------------w~ 343 (416)
... ....| ..+++|++|||++|+.+.+..+. ++++|++++||+||+|+||||+|+| |+
T Consensus 514 ~~~---~~~~~~~~~~~~~nfl~nHD~~R~~s~~~~~~-~~kla~a~llt~pG~P~IYyGdE~G~~~~~dp~~R~~~~W~ 589 (696)
T 4aee_A 514 NNV---YAYIPHYKALSLYNMLGSHDVPRIKSMVQNNK-LLKLMYVLIFALPGSPVIYYGDEIGLEGGRDPDNRRPMIWD 589 (696)
T ss_dssp HHH---HTTSCHHHHHHCEECSCCTTSCCHHHHHCCHH-HHHHHHHHHHHSSSEEEEETTGGGTCCCCSTTTTCCCCCCC
T ss_pred HHH---HHhcchhhhhheeEecCCCCCCeehhhcCCcH-HHHHHHHHHHhCCCceEEEecccccccCCCCccccCCcCCC
Confidence 100 01112 14689999999999988766444 8999999999999999999999986 43
Q ss_pred -----hhHHHHHHHHHHHHHhCcccCCCCeEEEEecCCEEEEEE---CCEEEEEEcCCCCC-----C-CCCCcEEeeeCC
Q 014892 344 -----DSIHNQIVKLMDVRRQQDIHSRSSIKILEAQSNLYSAII---GDKVCMKIGDGSWC-----P-AGKEWTLATSGH 409 (416)
Q Consensus 344 -----~~l~~~~~~Li~lR~~~~~l~~G~~~~~~~~~~~~~~~R---~~~~lvvinn~~~~-----~-~~~~~~~~ls~~ 409 (416)
.+++++||+||+|||++|+|+.|+++.+..++++++|.| +++++|++|++... + ..+.|+++++|.
T Consensus 590 ~~~~~~~l~~~~k~Li~lRk~~~al~~g~~~~~~~~~~v~af~R~~~~~~~lVv~N~s~~~~~v~l~~~~~~~~dllsg~ 669 (696)
T 4aee_A 590 RGNWDLELYEHIKKLIRIYKSCRSMRHGYFLVENLGSNLLFIKRWINNEEIIFLLNVSSKDISVDLKKLGKYSFDIYNEK 669 (696)
T ss_dssp GGGSCHHHHHHHHHHHHHHHHCHHHHSCEEEEEECSTTEEEEEEEETTEEEEEEEECSSSCEECCCC----CCEETTTCC
T ss_pred CCCCchHHHHHHHHHHHHHhhCHHhcCCcEEEEecCCCEEEEEEEcCCCEEEEEEECCCCCEEEEccCCCCeEEEcccCc
Confidence 379999999999999999999999999988889999998 56788889986532 1 234566666655
Q ss_pred ce
Q 014892 410 KY 411 (416)
Q Consensus 410 ~~ 411 (416)
.+
T Consensus 670 ~~ 671 (696)
T 4aee_A 670 NI 671 (696)
T ss_dssp C-
T ss_pred ee
Confidence 43
|
| >1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-65 Score=531.76 Aligned_cols=345 Identities=14% Similarity=0.268 Sum_probs=269.4
Q ss_pred eccCceeEEEeeecCCCC-------------------------CCcHHHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCcc
Q 014892 24 IRNGREILFQGFNWESCK-------------------------HDWWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYL 78 (416)
Q Consensus 24 ~~~~~~~~~q~f~~~~~~-------------------------~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~ 78 (416)
-|..+.+|||+|.+++.. .|||+||+++|||||+||||+||||||++++++|||+
T Consensus 126 ~W~~~~viYqi~~~~F~~~~~~~~~~~~~~w~~~~~~~~~~f~~G~~~gi~~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd 205 (585)
T 1wzl_A 126 EWAKEAVIYQIFPERFANGDPSNDPPGTEQWAKDARPRHDSFYGGDLKGVIDRLPYLEELGVTALYFTPIFASPSHHKYD 205 (585)
T ss_dssp SGGGGCCEEEECGGGTCCCCGGGCCTTCCCCCTTCCCCTTCCCCCCHHHHHHTHHHHHHHTCCEEEECCCEECSSSSCCS
T ss_pred chhccceEEEEcchhhcCCCcccccccccccCccCCCcccccCCCCHHHHHHHhHHHHHcCCCEEEECCcccCCCCCCcC
Confidence 344679999999876521 3799999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccccCcCCCCCCC--------CcccccCCCCCCCCCCceecCCCC
Q 014892 79 PQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHG--------GKYNRYDGIPLSWDEHAVTSCTGG 150 (416)
Q Consensus 79 ~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~--------~~~~~f~~~~~~~~~~~~~~~~~~ 150 (416)
|+|||+|+|+|||++|||+||++||++||+||||+|+||++.+++|+. +.|..| +.|........+++
T Consensus 206 ~~dy~~id~~~Gt~~dfk~lv~~~H~~Gi~VilD~V~NH~~~~~~~f~~~~~~g~~s~y~~~----y~~~~~~~~~~~~~ 281 (585)
T 1wzl_A 206 TADYLAIDPQFGDLPTFRRLVDEAHRRGIKIILDAVFNHAGDQFFAFRDVLQKGEQSRYKDW----FFIEDFPVSKTSRT 281 (585)
T ss_dssp CSEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEEECCSBCCTTSHHHHHHHHHGGGCTTGGG----BCBSSSSCCCSSCC
T ss_pred cccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEcCCcCCCccHHHHHHHhcCCCCCccCc----eEecCCCCCCCCCC
Confidence 999999999999999999999999999999999999999999987532 122111 01111110000111
Q ss_pred CCCCCCCC-CCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcHHHHHHHHHhcC---C-ceEEEcccCC
Q 014892 151 LGNGSTGD-NFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGAR---P-IFSVGEYWDS 225 (416)
Q Consensus 151 ~~~~~~~~-~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~~~~~~~~~~~~---~-~~~vgE~~~~ 225 (416)
.. .... +...+|+||++||+||++|++++++|+ ++||||||+|+|++++.+||++++++++ | .+++||+|..
T Consensus 282 ~y--~~~~~~~~~~pdln~~~~~vr~~l~~~~~~Wl-~~gvDGfR~D~a~~~~~~f~~~~~~~v~~~~p~~~~igE~~~~ 358 (585)
T 1wzl_A 282 NY--ETFAVQVPAMPKLRTENPEVKEYLFDVARFWM-EQGIDGWRLDVANEVDHAFWREFRRLVKSLNPDALIVGEIWHD 358 (585)
T ss_dssp SB--CBSSSSCTTCBBBCTTSHHHHHHHHHHHHHHH-HTTCCEEEETTGGGSCHHHHHHHHHHHHHHCTTCEEEECCSSC
T ss_pred Ce--eEcccCCCCCCeeCcCCHHHHHHHHHHHHHHH-hCCCeEEEEeccccCCHHHHHHHHHHHHHHCCCEEEEEEecCc
Confidence 11 1111 346799999999999999999999999 9999999999999999999999988764 5 7899999975
Q ss_pred CCCCCCCCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHhcCc---hhhhhhhcCCCCCccc-cccCcceecccC
Q 014892 226 CNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKGQ---FWRLRDAQGKPPGVMG-WWPSRAVTFLDN 301 (416)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~-~~p~~~~~fl~n 301 (416)
.. .|+. ..+++++|++++...+...+.+. ...+...+......+. ..+..+++|++|
T Consensus 359 ~~------------------~~~~-~~~~d~~~n~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~y~~~~~~~~~~~~~n 419 (585)
T 1wzl_A 359 AS------------------GWLM-GDQFDSVMNYLFRESVIRFFATGEIHAERFDAELTRARMLYPEQAAQGLWNLLDS 419 (585)
T ss_dssp CG------------------GGCS-SSSCSEEBCHHHHHHHHHHHTSCCSCHHHHHHHHHHHHTTSCHHHHTTCEEESCC
T ss_pred hH------------------HHhc-CCCcCEEECHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHhcchhhhccceEecCC
Confidence 21 2222 23577889999888888887442 2222221110000011 112356899999
Q ss_pred CCCCCCCCCCCCChhhHHHHHHHHhcCCCeeEEecCCcCC--------------Cc-----hhHHHHHHHHHHHHHhCcc
Q 014892 302 HDTGSTQAHWPFPSNHIMEGYAYILMHPGIPSVFYDHFYD--------------WG-----DSIHNQIVKLMDVRRQQDI 362 (416)
Q Consensus 302 HD~~R~~~~~~~~~~~~~~a~a~llt~pGiP~Iy~G~E~g--------------w~-----~~l~~~~~~Li~lR~~~~~ 362 (416)
||++|+.+.++.+.+++++|++++||+||+|+||||+|+| |+ .++++++|+|++|||++|+
T Consensus 420 HD~~r~~~~~~~~~~~~~~a~~~~~~~pG~P~iy~G~E~g~~~~~d~~~r~~~~W~~~~~~~~l~~~~~~Li~lRk~~~a 499 (585)
T 1wzl_A 420 HDTERFLTSCGGNEAKFRLAVLFQMTYLGTPLIYYGDEIGMAGATDPDCLRPMIWEEKEQNRGLFEFYKELIRLRHRLAS 499 (585)
T ss_dssp TTSCCHHHHTTTCHHHHHHHHHHHHHSSSEEEEETTGGGTCCCCSTTGGGCCCCCCGGGSCHHHHHHHHHHHHHHHHCHH
T ss_pred CCchhhHHhcCCcHHHHHHHHHHHHhCCCCcEEEeecccCcCCCCCcccccCCCCCCCCCcHHHHHHHHHHHHHHhhCHH
Confidence 9999998877656778999999999999999999999985 43 3799999999999999999
Q ss_pred cCCCCeEEEEec--CCEEEEEE---CCEEEEEEcCCC
Q 014892 363 HSRSSIKILEAQ--SNLYSAII---GDKVCMKIGDGS 394 (416)
Q Consensus 363 l~~G~~~~~~~~--~~~~~~~R---~~~~lvvinn~~ 394 (416)
|+.|.++.+..+ +++++|.| +++++||+|++.
T Consensus 500 l~~g~~~~~~~~~~~~v~af~R~~~~~~~lvv~N~~~ 536 (585)
T 1wzl_A 500 LTRGNVRSWHADKQANLYAFVRTVQDQHVGVVLNNRG 536 (585)
T ss_dssp HHHCEEEEEEEETTTTEEEEEEEETTEEEEEEEECSS
T ss_pred HcCCcEEEEEeCCCCCEEEEEEEcCCCEEEEEEECCC
Confidence 999999998876 78999998 467889999865
|
| >3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-65 Score=515.04 Aligned_cols=358 Identities=16% Similarity=0.214 Sum_probs=275.9
Q ss_pred ccCceeEEEeeecCCCCCCcHHHHHhhhhhHHHcCCCEEEeCCCCCCCC-------CCCcccccCCCCCCCCCCHHHHHH
Q 014892 25 RNGREILFQGFNWESCKHDWWRNLERKVPDISKSGFTSVWLPPATHSFA-------PEGYLPQNLYSLNSSYGSEHLLKA 97 (416)
Q Consensus 25 ~~~~~~~~q~f~~~~~~~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~-------~~GY~~~d~~~id~~~Gt~~d~~~ 97 (416)
+-.+.+|||++.+.++..|||+||+++|||||+||||+|||+||+++++ ++||+|.||++|+|+|||++||++
T Consensus 9 w~~~~viYei~~~~f~~~G~~~~i~~~l~yl~~lG~~~i~l~Pi~~~~~~~~~~~~~~gY~~~dy~~i~~~~Gt~~~~~~ 88 (449)
T 3dhu_A 9 QLRNEMIYSVFVRNYSEAGNFAGVTADLQRIKDLGTDILWLLPINPIGEVNRKGTLGSPYAIKDYRGINPEYGTLADFKA 88 (449)
T ss_dssp GGGGCCEEEECHHHHSSSCSHHHHHTTHHHHHHHTCSEEEECCCSCBCSTTCCTTTCCTTSBSCTTSCCGGGCCHHHHHH
T ss_pred hhhcCEEEEEEhhhhCCCCCHHHHHHhHHHHHHcCCCEEEECCcccccccCCCCCCCCCcCcccccccCcccCCHHHHHH
Confidence 3445999999999999999999999999999999999999999998764 368999999999999999999999
Q ss_pred HHHHHHHCCCEEEEEEccccCcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHH
Q 014892 98 LLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDI 177 (416)
Q Consensus 98 Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l 177 (416)
||++||++||+||+|+|+||++.++++......+|.. .+ ++... .....|.++||||++||+||++|
T Consensus 89 lv~~~h~~Gi~vi~D~V~NH~~~~~~~~~~~~~~~~~-----~~-------~~~~~-~~~~~w~~~~dLn~~np~Vr~~l 155 (449)
T 3dhu_A 89 LTDRAHELGMKVMLDIVYNHTSPDSVLATEHPEWFYH-----DA-------DGQLT-NKVGDWSDVKDLDYGHHELWQYQ 155 (449)
T ss_dssp HHHHHHHTTCEEEEEECCSEECTTSHHHHHCGGGBCB-----CT-------TSCBC-CSSTTCTTCEEBCTTSHHHHHHH
T ss_pred HHHHHHHCCCEEEEEEccCcCcCccchhhcCccceEE-----CC-------CCCcC-CCCCCCCCCCccCCCCHHHHHHH
Confidence 9999999999999999999999977643211111210 00 00000 01123678999999999999999
Q ss_pred HHHHHHHHHhcCCCeEEecccCCCcHHHHHHHHHhcC---C-ceEEEcccCCCCCCCCCCCCccchhhHhHhh--h---h
Q 014892 178 IAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGAR---P-IFSVGEYWDSCNYNSHGLDYNQDSHRQRIIN--W---I 248 (416)
Q Consensus 178 ~~~~~~w~~~~gvDGfRlD~a~~~~~~~~~~~~~~~~---~-~~~vgE~~~~~~~~~~~~~~~~~~~~~~l~~--~---~ 248 (416)
++++++|+ +. |||||+|+|++++.+||++++++++ | .+++||+|.+.. ...+.. + .
T Consensus 156 ~~~l~~w~-~~-vDGfRlDaa~~~~~~f~~~~~~~~~~~~p~~~~~gE~~~~~~-------------~~~~~~~g~~~~~ 220 (449)
T 3dhu_A 156 IDTLLYWS-QF-VDGYRCDVAPLVPLDFWLEARKQVNAKYPETLWLAESAGSGF-------------IEELRSQGYTGLS 220 (449)
T ss_dssp HHHHHHHT-TT-CSEEEETTGGGSCHHHHHHHHHHHHHHSTTCEEEECCCCHHH-------------HHHHHHTTCCCCC
T ss_pred HHHHHHHH-Hh-CCEEEEEChhhCCHHHHHHHHHHHHhhCCCeEEEeccCCchH-------------HHHHHhcCccccc
Confidence 99999999 55 9999999999999999999988764 4 678999986410 011100 0 0
Q ss_pred cc--CCCcccccCchhhHHHHHHhcCc--hhhhhhhcCCCCCccccccCcceecccCCCCCCCCCCCCCChhhHHHHHHH
Q 014892 249 DG--TGQLSAAFDFTTKGILQEAVKGQ--FWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFPSNHIMEGYAY 324 (416)
Q Consensus 249 ~~--~~~~~~~fdf~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~p~~~~~fl~nHD~~R~~~~~~~~~~~~~~a~a~ 324 (416)
+. ...++.+++|++...+...+.+. ...+.+.+......+ ..+...++|++|||++|+.+.+. +.+++++|+++
T Consensus 221 ~~~l~~~fd~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~fl~NHD~~R~~~~~~-~~~~~k~a~a~ 298 (449)
T 3dhu_A 221 DSELYQAFDMTYDYDVFGDFKDYWQGRSTVERYVDLLQRQDATF-PGNYVKMRFLENHDNARMMSLMH-SKAEAVNNLTW 298 (449)
T ss_dssp HHHHHTTCSEEEGGGTHHHHHHHHTTSSCHHHHHHHHHHHHTTS-CTTCEEEECSCCTTSCCHHHHCC-SHHHHHHHHHH
T ss_pred cchhhhccCccccHHHHHHHHHHHhCCCCHHHHHHHHHHHHhhc-CCchhheeecccCCccchhhhcC-CHHHHHHHHHH
Confidence 00 02356778888887776666443 333333221100111 11235689999999999887765 56789999999
Q ss_pred HhcCCCeeEEecCCcCC--------------Cc--hhHHHHHHHHHHHHHhCcccCCCCeEEEEecCCEEEEEE---CCE
Q 014892 325 ILMHPGIPSVFYDHFYD--------------WG--DSIHNQIVKLMDVRRQQDIHSRSSIKILEAQSNLYSAII---GDK 385 (416)
Q Consensus 325 llt~pGiP~Iy~G~E~g--------------w~--~~l~~~~~~Li~lR~~~~~l~~G~~~~~~~~~~~~~~~R---~~~ 385 (416)
+||+||+|+||||+|+| |+ .+++++|++|++||++ ++++.|.++.+..++++++|.| +++
T Consensus 299 ~lt~pG~P~IyyG~E~g~~~~~d~~~r~~~~W~~~~~~~~~i~~Li~lR~~-~al~~g~~~~~~~~~~~iaf~R~~~~~~ 377 (449)
T 3dhu_A 299 IFMQRGIPLIYNGQEFLAEHQPSLFDRDTMVADRHGDVTPLIQKLVTIKQL-PLLRAADYQLAVVEEGIVKITYRAAGEA 377 (449)
T ss_dssp HHHSSSEEEEETTGGGTCCSCCCSSSCCCCTTCCCCCCHHHHHHHHHHHTS-GGGGCSEEEEEECGGGCEEEEEEETTEE
T ss_pred HHhCCCCcEEEccEecccCCCCCcccCCCcCCCccchHHHHHHHHHHHhhh-HhccCCceEEEecCCCEEEEEEEeCCcE
Confidence 99999999999999986 32 3588999999999999 9999999999998889999998 678
Q ss_pred EEEEEcCCCCC------CCCCCcEEeeeCCceEE
Q 014892 386 VCMKIGDGSWC------PAGKEWTLATSGHKYAV 413 (416)
Q Consensus 386 ~lvvinn~~~~------~~~~~~~~~ls~~~~~~ 413 (416)
++||+|++... .+.+.|+++++|..+.+
T Consensus 378 ~~vv~N~s~~~~~~~~~lp~g~y~Dvlsg~~~~~ 411 (449)
T 3dhu_A 378 LTAWIPLKGQVTAVATKLAAGSYQNLLTDGPTEV 411 (449)
T ss_dssp EEEEECTTCCEEEEECCSCSEEEEETTTTEEEEE
T ss_pred EEEEEECCCCceEEEeecCCCeEEEcccCceEEE
Confidence 89999986532 13468999999987765
|
| >1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-64 Score=515.23 Aligned_cols=353 Identities=20% Similarity=0.330 Sum_probs=266.2
Q ss_pred eeeeccCceeEEEeeecCCCCCCcHHHHHhh-hhhHHHcCCCEEEeCCCCCCCCC------CCcccccCCCCCCCCCCHH
Q 014892 21 RAVIRNGREILFQGFNWESCKHDWWRNLERK-VPDISKSGFTSVWLPPATHSFAP------EGYLPQNLYSLNSSYGSEH 93 (416)
Q Consensus 21 ~~~~~~~~~~~~q~f~~~~~~~G~~~gi~~~-LdyLk~LGv~~I~L~Pi~~~~~~------~GY~~~d~~~id~~~Gt~~ 93 (416)
-|+++.++++|+|+|.|+ |+||+++ |||||+||||+|||+||+++++. |||+|.| |+|+|+|||++
T Consensus 3 ~~~~~~~~~~i~~~F~w~------~~gi~~~~ldyL~~LGv~~I~l~Pi~~~~~~~~~~~~~gYd~~d-y~idp~~Gt~~ 75 (471)
T 1jae_A 3 DANFASGRNSIVHLFEWK------WNDIADECERFLQPQGFGGVQISPPNEYLVADGRPWWERYQPVS-YIINTRSGDES 75 (471)
T ss_dssp CCCCCTTCEEEEEETTCC------HHHHHHHHHHTTTTTTEEEEECCCCSCBBCCTTCCGGGGGSBCC-SCSEETTEEHH
T ss_pred CCCCCCCCCeEEEEecCC------HHHHHHHHHHHHHHcCCCEEEeCccccccCCCCCCccccccccc-ccccCCCCCHH
Confidence 378899999999999999 9999999 69999999999999999998753 7999999 59999999999
Q ss_pred HHHHHHHHHHHCCCEEEEEEccccCcCCCC-CCCCcc-----cccCCCCC---CCCCCc-eecCCCCCCCCCCCCCCCCC
Q 014892 94 LLKALLHKMKQHKVRAMADIVINHRVGTTQ-GHGGKY-----NRYDGIPL---SWDEHA-VTSCTGGLGNGSTGDNFHGV 163 (416)
Q Consensus 94 d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~-~~~~~~-----~~f~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~ 163 (416)
||++||++||++||+||||+|+||++..+. +..+.+ ..|.+.++ .|++.+ +..+.++. ...+|++..+
T Consensus 76 d~~~lv~~~h~~Gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~f~~~~~i~~~~~~~--~~~~~~~~~~ 153 (471)
T 1jae_A 76 AFTDMTRRCNDAGVRIYVDAVINHMTGMNGVGTSGSSADHDGMNYPAVPYGSGDFHSPCEVNNYQDAD--NVRNCELVGL 153 (471)
T ss_dssp HHHHHHHHHHHTTCEEEEEECCSBCCSSCEEBTTSCEEBTTTTBBTTTTBCGGGBCCCCBCCCTTCHH--HHHHSBBTTB
T ss_pred HHHHHHHHHHHCCCEEEEEEecccccCCCCcCCCCCccCccCCcCCCCCCCHhHcCCCCCccCCCChh--hccccccCCC
Confidence 999999999999999999999999999861 111111 11111111 111110 01111111 1234567889
Q ss_pred CcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcHHHHHHHHHhcCC------------ceEEEcccCCCCCCCC
Q 014892 164 PNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGARP------------IFSVGEYWDSCNYNSH 231 (416)
Q Consensus 164 ~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~~~~~~~~~~~~~------------~~~vgE~~~~~~~~~~ 231 (416)
||||++||+||++|++++++|+ ++||||||+|+|++++++||+++.++++. .+++||+|..+.
T Consensus 154 pdLn~~np~V~~~i~~~~~~w~-~~gvDGfRlDa~~~i~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~gE~~~~~~---- 228 (471)
T 1jae_A 154 RDLNQGSDYVRGVLIDYMNHMI-DLGVAGFRVDAAKHMSPGDLSVIFSGLKNLNTDYGFADGARPFIYQEVIDLGG---- 228 (471)
T ss_dssp CBBCTTSHHHHHHHHHHHHHHH-HTTCCEEEETTGGGSCHHHHHHHHHTCCCCCGGGTCCTTCCCEEEEECCCCSS----
T ss_pred CccCcCCHHHHHHHHHHHHHHH-HcCCCEEEeechhcCCHHHHHHHHHHHhhhccccccccCCCceEEEeeecCCC----
Confidence 9999999999999999999999 79999999999999999999999988752 489999997531
Q ss_pred CCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHhcC--chhhhhhhcCCCCCccc-cccCcceecccCCCCCCCC
Q 014892 232 GLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKG--QFWRLRDAQGKPPGVMG-WWPSRAVTFLDNHDTGSTQ 308 (416)
Q Consensus 232 ~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~-~~p~~~~~fl~nHD~~R~~ 308 (416)
.... ...| .+++++++|++...+.+++.+ ....+.+ +... .+ ..+...++|++|||++|+.
T Consensus 229 --~~~~------~~~y----~~~~~~~~f~~~~~l~~~~~~~~~~~~l~~-~~~~---~~~~~~~~~~~fl~nHD~~R~~ 292 (471)
T 1jae_A 229 --EAIS------KNEY----TGFGCVLEFQFGVSLGNAFQGGNQLKNLAN-WGPE---WGLLEGLDAVVFVDNHDNQRTG 292 (471)
T ss_dssp --SSCC------GGGT----TTSSEEECHHHHHHHHHHHTTTSCGGGGGG-CSGG---GTCCCGGGEEECSCCTTHHHHS
T ss_pred --cccc------hhhh----cCCCceeccHHHHHHHHHHhCCCcHHHHHH-hhhh---cCCCChhheeEEeecCCCCCCC
Confidence 0000 0011 136789999999999998854 3333332 1111 11 2345789999999999986
Q ss_pred --CCCC-CChhhHHHHHHHHhcCC-CeeEEecCCcCCCc-----------------------------hhHHHHHHHHHH
Q 014892 309 --AHWP-FPSNHIMEGYAYILMHP-GIPSVFYDHFYDWG-----------------------------DSIHNQIVKLMD 355 (416)
Q Consensus 309 --~~~~-~~~~~~~~a~a~llt~p-GiP~Iy~G~E~gw~-----------------------------~~l~~~~~~Li~ 355 (416)
+.+. .+.+++++|++++||+| |+|+||||+|++-. .+++++||+|++
T Consensus 293 g~~~~~~~~~~~~~la~a~llt~pyG~P~iy~G~E~g~~~~~~p~~~~~~~~~p~f~~~~~w~~~~~~~~l~~~~~~Li~ 372 (471)
T 1jae_A 293 GSQILTYKNPKPYKMAIAFMLAHPYGTTRIMSSFDFTDNDQGPPQDGSGNLISPGINDDNTCSNGYVCEHRWRQVYGMVG 372 (471)
T ss_dssp CTTCCCTTSHHHHHHHHHHHHHSCSSEEEEEECBCCSSTTCCCCBCTTSCBCCCEECTTSCEETTBCCGGGSHHHHHHHH
T ss_pred CCcccccCCHHHHHHHHHHHHhCcCCceEEEecceecCCCCCCCccCCCCccccccccCCccccCcccchHHHHHHHHHH
Confidence 4443 35678999999999999 99999999997521 137899999999
Q ss_pred HHHhCcccCCCCeE-E-EEecCCEEEEEECCEEEEEEcCCCCC--------CCCCCcEEeeeC
Q 014892 356 VRRQQDIHSRSSIK-I-LEAQSNLYSAIIGDKVCMKIGDGSWC--------PAGKEWTLATSG 408 (416)
Q Consensus 356 lR~~~~~l~~G~~~-~-~~~~~~~~~~~R~~~~lvvinn~~~~--------~~~~~~~~~ls~ 408 (416)
|||++ .|... . +..++++++|.|+++++||+|++ .. ...+.|+++++|
T Consensus 373 lR~~~----~g~~~~~~~~~~~~~~af~R~~~~~vv~N~~-~~~~~~l~~~~~~g~~~d~l~g 430 (471)
T 1jae_A 373 FRNAV----EGTQVENWWSNDDNQIAFSRGSQGFVAFTNG-GDLNQNLNTGLPAGTYCDVISG 430 (471)
T ss_dssp HHHHT----TTCCEEEEEECSSSEEEEEETTTEEEEEESS-SCEEEEEECCCCSEEEECTTTC
T ss_pred HHHhc----cCCceEEEEeCCCCEEEEecCCCEEEEEeCC-CcceeeeeccCCCceEEEeecc
Confidence 99998 45553 2 33346899999988899999998 43 123568888873
|
| >2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-65 Score=518.40 Aligned_cols=350 Identities=18% Similarity=0.275 Sum_probs=260.0
Q ss_pred eeeccCceeEEEeeecCCCC-----------------CCcHHHHHhhhhhHHHcCCCEEEeCCCCCCC--------CCCC
Q 014892 22 AVIRNGREILFQGFNWESCK-----------------HDWWRNLERKVPDISKSGFTSVWLPPATHSF--------APEG 76 (416)
Q Consensus 22 ~~~~~~~~~~~q~f~~~~~~-----------------~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~--------~~~G 76 (416)
++.|. +.+|||+|.+.+.. .|||+||+++|||||+||||+|||+||+++. ++||
T Consensus 3 ~~~w~-~~~iYqi~~~~F~~~~~~~~~~~~~~~~~~~gG~~~gi~~~LdyL~~lGvt~I~l~Pi~~~~~~~~~~~~~~~G 81 (478)
T 2guy_A 3 PADWR-SQSIYFLLTDRFARTDGSTTATCNTADQKYCGGTWQGIIDKLDYIQGMGFTAIWITPVTAQLPQTTAYGDAYHG 81 (478)
T ss_dssp HHHHT-TCCEEEECHHHHCBTTCCSSCCCCGGGTCCCCBCHHHHHHTHHHHHTTTCCEEEECCCEEECCCCBTTBCCTTS
T ss_pred chhhc-cCcEEEEecccccCCCCCCCCCCCCcccccCCCCHHHHHHHHHHHHhcCCCEEEeCCcccCCccccCCCCCCCC
Confidence 34454 47899999975531 2899999999999999999999999999864 6799
Q ss_pred cccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccccCcCCCCCCCCcccccCC--CCCCCCCCc-eecCCCCC--
Q 014892 77 YLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDG--IPLSWDEHA-VTSCTGGL-- 151 (416)
Q Consensus 77 Y~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~--~~~~~~~~~-~~~~~~~~-- 151 (416)
|++.|||+|+|+|||++||++||++||++||+||||+|+||++.++++....|..|.+ ....|++.+ +..+.+..
T Consensus 82 Y~~~d~~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (478)
T 2guy_A 82 YWQQDIYSLNENYGTADDLKALSSALHERGMYLMVDVVANHMGYDGAGSSVDYSVFKPFSSQDYFHPFCFIQNYEDQTQV 161 (478)
T ss_dssp CSEEEEEEECTTSCCHHHHHHHHHHHHHTTCEEEEEECCSBCCEEBCGGGCCGGGSBSCCSGGGBCCSCBCCCTTCHHHH
T ss_pred CCcccccccCccCCCHHHHHHHHHHHHHCCCEEEEEECcccCCCCCCcccccccccCCCCchhhcCCCCcccCCCCCccc
Confidence 9999999999999999999999999999999999999999999977633222322211 001122211 11121110
Q ss_pred CCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcHHHHHHHHHhcCCceEEEcccCCCCCCCC
Q 014892 152 GNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGARPIFSVGEYWDSCNYNSH 231 (416)
Q Consensus 152 ~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~~~~~~~~~~~~~~~~vgE~~~~~~~~~~ 231 (416)
..++.+.+...+||||++||+||++|++++++|++++||||||+|+|++++.+||+++.++. +.+++||+|...
T Consensus 162 ~~~w~g~~~~~~~dln~~~~~V~~~l~~~~~~w~~~~gvDGfR~Da~~~~~~~f~~~~~~~~-~~~~igE~~~~~----- 235 (478)
T 2guy_A 162 EDCWLGDNTVSLPDLDTTKDVVKNEWYDWVGSLVSNYSIDGLRIDTVKHVQKDFWPGYNKAA-GVYCIGEVLDGD----- 235 (478)
T ss_dssp HHSBEECSSEEECBBCTTSHHHHHHHHHHHHHHHHHHTCCEEEETTGGGSCGGGHHHHHHHH-TSEEEECCCCSC-----
T ss_pred ccccccCCCCCCCeeCcCCHHHHHHHHHHHHHHHHhcCCCEEEEeccccCCHHHHHHHHhcC-CceEEeeecCCC-----
Confidence 01122222346899999999999999999999998899999999999999999999998873 478999999762
Q ss_pred CCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHhc---CchhhhhhhcCCCCCccccccCcceecccCCCCCCCC
Q 014892 232 GLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVK---GQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQ 308 (416)
Q Consensus 232 ~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~p~~~~~fl~nHD~~R~~ 308 (416)
...+..|. +++++++||++...+..++. ++...+.+.+......+ ..+...++|++|||++|+.
T Consensus 236 ---------~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~f~~nHD~~r~~ 302 (478)
T 2guy_A 236 ---------PAYTCPYQ---NVMDGVLNYPIYYPLLNAFKSTSGSMDDLYNMINTVKSDC-PDSTLLGTFVENHDNPRFA 302 (478)
T ss_dssp ---------HHHHGGGG---GTSSEEBCHHHHHHHHHHHSSTTCCHHHHHHHHHHHHHHS-SCGGGSEECSCCTTSCCGG
T ss_pred ---------chhHHhhh---ccCccccCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHhhC-cChhhceeeccCCCCcccc
Confidence 23333443 23678999999888888874 22333333221000000 1234678999999999998
Q ss_pred CCCCCChhhHHHHHHHHhcCCCeeEEecCCcCCCc-------------------hhHHHHHHHHHHHHHhCcccC----C
Q 014892 309 AHWPFPSNHIMEGYAYILMHPGIPSVFYDHFYDWG-------------------DSIHNQIVKLMDVRRQQDIHS----R 365 (416)
Q Consensus 309 ~~~~~~~~~~~~a~a~llt~pGiP~Iy~G~E~gw~-------------------~~l~~~~~~Li~lR~~~~~l~----~ 365 (416)
+... +..++++|++++||+||+|+||||+|+|.. .+++++|++|++|||++++.. .
T Consensus 303 ~~~~-~~~~~~~a~a~~l~~pG~P~iy~G~E~g~~~~~~~~~r~~~W~~~~~~~~~l~~~~~~L~~lR~~~~~~~~~~~~ 381 (478)
T 2guy_A 303 SYTN-DIALAKNVAAFIILNDGIPIIYAGQEQHYAGGNDPANREATWLSGYPTDSELYKLIASANAIRNYAISKDTGFVT 381 (478)
T ss_dssp GTCC-CHHHHHHHHHHHHHSSSEEEEETTGGGTCCCCSTTTTCCCGGGGTCCTTSHHHHHHHHHHHHHHHHHHHCTTTTT
T ss_pred cccC-CHHHHHHHHHHHHcCCCccEEEeehhhccCCCCCccchhhhcccCCCcchHHHHHHHHHHHHHHhhhhcCCcccc
Confidence 7664 566889999999999999999999998631 359999999999999875432 2
Q ss_pred CCeEEEEecCCEEEEEE---CCEEEEEEcC
Q 014892 366 SSIKILEAQSNLYSAII---GDKVCMKIGD 392 (416)
Q Consensus 366 G~~~~~~~~~~~~~~~R---~~~~lvvinn 392 (416)
+.++.+..++++++|.| ++++++|++|
T Consensus 382 ~~~~~~~~~~~~~af~R~~~~~~~~vv~~N 411 (478)
T 2guy_A 382 YKNWPIYKDDTTIAMRKGTDGSQIVTILSN 411 (478)
T ss_dssp SCCEEEEEETTEEEEEESSTTSCEEEEEEC
T ss_pred cceeEEeeCCeEEEEEEEcCCCcEEEEEEC
Confidence 34577777888999998 2345555555
|
| >1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-64 Score=509.29 Aligned_cols=351 Identities=18% Similarity=0.264 Sum_probs=260.4
Q ss_pred CceeEEEeeecCCCCCCcHHHHHhh-hhhHHHcCCCEEEeCCCCCCCCC----CCcccccCCCCCCCCCCHHHHHHHHHH
Q 014892 27 GREILFQGFNWESCKHDWWRNLERK-VPDISKSGFTSVWLPPATHSFAP----EGYLPQNLYSLNSSYGSEHLLKALLHK 101 (416)
Q Consensus 27 ~~~~~~q~f~~~~~~~G~~~gi~~~-LdyLk~LGv~~I~L~Pi~~~~~~----~GY~~~d~~~id~~~Gt~~d~~~Lv~~ 101 (416)
++++|+|+|.|+ |+||+++ |||||+||||+||||||+++++. |||+|.| |+|+|+|||++|||+||++
T Consensus 1 ~~~~~~q~F~w~------~~gi~~~lldyL~~LGv~~I~l~Pi~~~~~~~~~~~gY~~~~-y~idp~~Gt~~dfk~Lv~~ 73 (448)
T 1g94_A 1 TPTTFVHLFEWN------WQDVAQECEQYLGPKGYAAVQVSPPNEHITGSQWWTRYQPVS-YELQSRGGNRAQFIDMVNR 73 (448)
T ss_dssp CCCCEEEETTCC------HHHHHHHHHHTHHHHTCCEEEECCCSCBBCSSSGGGGGSBSC-SCSCBTTBCHHHHHHHHHH
T ss_pred CCCEEEEEecCc------HHHHHHHHHHHHHHcCCCEEEECCccccCCCCCCcccccccc-cccCCCCCCHHHHHHHHHH
Confidence 468999999999 9999998 59999999999999999998753 7999997 6999999999999999999
Q ss_pred HHHCCCEEEEEEccccCcCCCCCC--CCcccccCC---CCCCCCCCc-ee--cCCCCCCCCCCCCCCCCCCcCCCCCHHH
Q 014892 102 MKQHKVRAMADIVINHRVGTTQGH--GGKYNRYDG---IPLSWDEHA-VT--SCTGGLGNGSTGDNFHGVPNIDHTQHFV 173 (416)
Q Consensus 102 aH~~Gi~VilD~V~NH~~~~~~~~--~~~~~~f~~---~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~dln~~~~~v 173 (416)
||++||+||||+|+||++..++.. .+.|..+.- .+.+|++.+ +. .+.+.+. ....|++.++||||++||+|
T Consensus 74 aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~dln~~np~V 152 (448)
T 1g94_A 74 CSAAGVDIYVDTLINHMAAGSGTGTAGNSFGNKSFPIYSPQDFHESCTINNSDYGNDRY-RVQNCELVGLADLDTASNYV 152 (448)
T ss_dssp HHHTTCEEEEEEECSEECSSCEEBTTSCEEBTTBCSSCCGGGBCCCCBCCTTHHHHCHH-HHHHSBSTTCEEBCTTSHHH
T ss_pred HHHCCCEEEEEEeeccccCCCCCCCCCCCCccccCCCCCHHHcCCCCCcCccccCCccc-ccceeeccCCCCcCCCCHHH
Confidence 999999999999999999987410 112221100 012333211 10 1110000 01235567899999999999
Q ss_pred HHHHHHHHHHHHHhcCCCeEEecccCCCcHHHHHHHHHhcC-CceEEEcccCCCCCCCCCCCCccchhhHhHhhhhccCC
Q 014892 174 RKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGAR-PIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTG 252 (416)
Q Consensus 174 ~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~~~~~~~~~~~~-~~~~vgE~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 252 (416)
|++|++++++|+ ++||||||+|+|++++.+||++++++++ +.+++||+|...+ .. .....|..
T Consensus 153 r~~i~~~~~~w~-~~gvDGfR~D~~~~i~~~~~~~~~~~~~~~~~~vgE~~~~~~----~~--------~~~~~y~~--- 216 (448)
T 1g94_A 153 QNTIAAYINDLQ-AIGVKGFRFDASKHVAASDIQSLMAKVNGSPVVFQEVIDQGG----EA--------VGASEYLS--- 216 (448)
T ss_dssp HHHHHHHHHHHH-HHTCCEEEEETGGGSCHHHHHHHHHTSCSCCEEEECCCCSSC----CS--------SCGGGGGG---
T ss_pred HHHHHHHHHHHH-hcCCCEEeecccccCCHHHHHHHHHHhccCCeEEEEeecCCC----Cc--------ccHHhhcC---
Confidence 999999999999 8999999999999999999999999998 4889999997521 00 01122322
Q ss_pred CcccccCchhhHHHHHHhc-CchhhhhhhcCCCCCccccccCcceecccCCCCCCC--C--CCC-CCChhhHHHHHHHHh
Q 014892 253 QLSAAFDFTTKGILQEAVK-GQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGST--Q--AHW-PFPSNHIMEGYAYIL 326 (416)
Q Consensus 253 ~~~~~fdf~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~fl~nHD~~R~--~--~~~-~~~~~~~~~a~a~ll 326 (416)
..++++|++...+.+++. ++...+.+. ... .....|...++|++|||++|+ . ..+ ..+.+++++|++++|
T Consensus 217 -~~~~~~f~~~~~l~~~~~~~~~~~l~~~-~~~--~~~~~~~~~~~f~~nHD~~r~~~~~g~~l~~~~~~~~~la~a~~l 292 (448)
T 1g94_A 217 -TGLVTEFKYSTELGNTFRNGSLAWLSNF-GEG--WGFMPSSSAVVFVDNHDNQRGHGGAGNVITFEDGRLYDLANVFML 292 (448)
T ss_dssp -GSEEECHHHHHHHHHHHHHSCGGGGGGT-TGG--GTCCCGGGEEECSCCTTGGGTSSCCTTSCCGGGTHHHHHHHHHHH
T ss_pred -CCceeeccchhhHHHHhcCCCHHHHHHh-hhh--cCCCChhHceEEecCCCCCCCCCCcccccccCCHHHHHHHHHHHH
Confidence 346888988888888874 444444432 110 011235688999999999998 3 222 224568999999999
Q ss_pred cCC-CeeEEecCCcCCCc-------------------------hhHHHHHHHHHHHHHhCcccCCC-CeEEEEec-CCEE
Q 014892 327 MHP-GIPSVFYDHFYDWG-------------------------DSIHNQIVKLMDVRRQQDIHSRS-SIKILEAQ-SNLY 378 (416)
Q Consensus 327 t~p-GiP~Iy~G~E~gw~-------------------------~~l~~~~~~Li~lR~~~~~l~~G-~~~~~~~~-~~~~ 378 (416)
|+| |+|+||||+|+|.. .+++++||+|++|||++ ..+ .++.+..+ ++++
T Consensus 293 ~~~~G~P~iy~G~E~G~~~~~~~p~~r~~~~~~~~~~~~~w~~~~l~~~~~~Li~lR~~~---~g~~~~~~~~~~~~~~~ 369 (448)
T 1g94_A 293 AYPYGYPKVMSSYDFHGDTDAGGPNVPVHNNGNLECFASNWKCEHRWSYIAGGVDFRNNT---ADNWAVTNWWDNTNNQI 369 (448)
T ss_dssp HSCSSEEEEEECBCCTTCTTCCCCSSCSEETTEECBSSSSBCCGGGSHHHHHHHHHHHHS---TTCCCCEEEEECSSSEE
T ss_pred hCCCCeeEEEechhccccCCCCCCccccccccCCcccCCCcccccHHHHHHHHHHHHHhc---cCCCceEEEEeCCCCEE
Confidence 999 99999999998421 24789999999999998 222 34444443 6899
Q ss_pred EEEECCEEEEEEcCCCCC--------CCCCCcEEeeeC
Q 014892 379 SAIIGDKVCMKIGDGSWC--------PAGKEWTLATSG 408 (416)
Q Consensus 379 ~~~R~~~~lvvinn~~~~--------~~~~~~~~~ls~ 408 (416)
+|.|.++++|++|++... .+.+.|+++++|
T Consensus 370 af~R~~~~~v~~N~~~~~~~~~~~~~l~~g~~~d~~~g 407 (448)
T 1g94_A 370 SFGRGSSGHMAINKEDSTLTATVQTDMASGQYCNVLKG 407 (448)
T ss_dssp EEECGGGEEEEEECSSSCBCCEEECCSCSEEEECTTTC
T ss_pred EEEcCCcEEEEEECCCCCeEEEEEcCCCCcEEEEeecC
Confidence 999976899999996532 123567887775
|
| >1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-64 Score=531.84 Aligned_cols=350 Identities=15% Similarity=0.242 Sum_probs=264.1
Q ss_pred CceeEEEeeecCCCC-----------------------CCcHHHHHhhhh--hHHHcCCCEEEeCCCCCC----------
Q 014892 27 GREILFQGFNWESCK-----------------------HDWWRNLERKVP--DISKSGFTSVWLPPATHS---------- 71 (416)
Q Consensus 27 ~~~~~~q~f~~~~~~-----------------------~G~~~gi~~~Ld--yLk~LGv~~I~L~Pi~~~---------- 71 (416)
.+++|||+|...+.. .|||+||+++|| |||+||||+||||||+++
T Consensus 10 ~~~viYqI~p~rF~d~~~~n~~~~~~~~~~~~~~~~~~gGdl~gi~~kLd~~yLk~LGv~aIwL~Pi~~~~~~~~~~~~g 89 (680)
T 1cyg_A 10 TSDVVYQIVVDRFVDGNTSNNPSGALFSSGCTNLRKYCGGDWQGIINKINDGYLTDMGVTAIWISQPVENVFSVMNDASG 89 (680)
T ss_dssp TTCCEEEECGGGTCCSCGGGCCCGGGBCGGGCSTTSBCCCCHHHHHHHHHTSTTTTTTCCEEEECCCEEECCCCCSSSSC
T ss_pred ccceEEEEecccccCCCCCcCCCCcccCCCccccccccCcCHHHHHhhcCHHHHHhCCCCEEEeCccccCccccccccCC
Confidence 568999999976632 189999999999 999999999999999975
Q ss_pred -CCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccccCcCCCC---CCCCcccccCCC------C----C
Q 014892 72 -FAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQ---GHGGKYNRYDGI------P----L 137 (416)
Q Consensus 72 -~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~---~~~~~~~~f~~~------~----~ 137 (416)
.++|||++.|||+|+|+|||++||++||++||++||+||||+|+||++..+. ++......+... + .
T Consensus 90 ~~~~~GY~~~Dy~~idp~~Gt~~df~~Lv~~aH~~GIkVilD~V~NHts~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (680)
T 1cyg_A 90 SASYHGYWARDFKKPNPFFGTLSDFQRLVDAAHAKGIKVIIDFAPNHTSPASETNPSYMENGRLYDNGTLLGGYTNDANM 169 (680)
T ss_dssp CCSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECTTEEEECCSSCTTSTTTTCEEETTEEEECSTTCTTC
T ss_pred CCCCCCcCchhccccCcccCCHHHHHHHHHHHHHCCCEEEEEeCCCCCCcccccCcchhhcCccccCcccccccCCCchh
Confidence 3679999999999999999999999999999999999999999999999874 222111111000 0 0
Q ss_pred CCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcHHHHHHHHHhc---C
Q 014892 138 SWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGA---R 214 (416)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~~~~~~~~~~~---~ 214 (416)
.|+......+.+.. ....+.+.++||||++||+||++|++++++|+ ++||||||||+|++++.+||+++++++ +
T Consensus 170 ~f~~~~~~~~~~~~--~~~y~~~~~~pDLn~~np~Vr~~i~~~~~~Wl-~~GVDGfRlDa~~~i~~~f~~~~~~~v~~~~ 246 (680)
T 1cyg_A 170 YFHHNGGTTFSSLE--DGIYRNLFDLADLNHQNPVIDRYLKDAVKMWI-DMGIDGIRMDAVKHMPFGWQKSLMDEIDNYR 246 (680)
T ss_dssp CBCCSCBCCCSSHH--HHHSSBSTTEEEBCTTSHHHHHHHHHHHHHHH-TTTCCEEEESCGGGSCSHHHHHHHHHHHHHC
T ss_pred ceecCCCCCcCCCc--cccccCcCCCCccccCCHHHHHHHHHHHHHHH-hCCCCEEEEeccccCCHHHHHHHHHHHhhcC
Confidence 01110000111000 01123455799999999999999999999999 599999999999999999999998776 4
Q ss_pred CceEEEcccCCCCCCCCCCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHhcC---chhhhhhhcCCCCCccccc
Q 014892 215 PIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKG---QFWRLRDAQGKPPGVMGWW 291 (416)
Q Consensus 215 ~~~~vgE~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~ 291 (416)
+.+++||.|.+.. . . ......|.+.. ..+++||++...+.+++.+ ....+.+.+......+ ..
T Consensus 247 ~~~~vgE~~~~~~-----~-~-----~~~~~~~~~~~--~~~~~df~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~ 312 (680)
T 1cyg_A 247 PVFTFGEWFLSEN-----E-V-----DANNHYFANES--GMSLLDFRFGQKLRQVLRNNSDNWYGFNQMIQDTASAY-DE 312 (680)
T ss_dssp CCEEEECCCCCTT-----C-C-----CHHHHHHHHHS--SCEEBCHHHHHHHHHHHTTCSCCHHHHHHHHHHHHHHC-TT
T ss_pred CcEEEccCCCCCc-----c-c-----chhhhhhhccC--CCceECchHHHHHHHHHhcCCCCHHHHHHHHHHHHhhc-cc
Confidence 6899999886521 0 0 02223343321 2467999999999888743 2333332221000000 12
Q ss_pred cCcceecccCCCCCCCCCCCCCChhhHHHHHHHHhcCCCeeEEecCCcCCCc-----------------hhHHHHHHHHH
Q 014892 292 PSRAVTFLDNHDTGSTQAHWPFPSNHIMEGYAYILMHPGIPSVFYDHFYDWG-----------------DSIHNQIVKLM 354 (416)
Q Consensus 292 p~~~~~fl~nHD~~R~~~~~~~~~~~~~~a~a~llt~pGiP~Iy~G~E~gw~-----------------~~l~~~~~~Li 354 (416)
+...++|++|||++|+.+ ...+.+++++|++++|++||+|+||||+|+|.. .+++++||+|+
T Consensus 313 ~~~~~~fl~NHD~~R~~s-~~~~~~~~~~a~a~llt~pG~P~IYyG~E~g~~~~~dp~~R~~m~~~~~~~~~~~~~~~Li 391 (680)
T 1cyg_A 313 VLDQVTFIDNHDMDRFMI-DGGDPRKVDMALAVLLTSRGVPNIYYGTEQYMTGNGDPNNRKMMSSFNKNTRAYQVIQKLS 391 (680)
T ss_dssp GGGCEECSCCTTSCCSCC-TTCCTHHHHHHHHHHHHSSSEEEEETTGGGTCCCCSTTGGGCCCCCCCSCSHHHHHHHHHH
T ss_pred hhhceEEecCCCcchhcc-cCCCHHHHHHHHHHHHhCCCCCEEEEeecccccCCCCccccccCcCCCCCcHHHHHHHHHH
Confidence 446789999999999988 333556899999999999999999999998632 36899999999
Q ss_pred HHHHhCcccCCCCeEEEEecCCEEEEEE---CCEEEEEEcCCC
Q 014892 355 DVRRQQDIHSRSSIKILEAQSNLYSAII---GDKVCMKIGDGS 394 (416)
Q Consensus 355 ~lR~~~~~l~~G~~~~~~~~~~~~~~~R---~~~~lvvinn~~ 394 (416)
+|||++|+|+.|+++.+..++++++|.| +++++|++|++.
T Consensus 392 ~lRk~~~al~~G~~~~~~~~~~v~af~R~~~~~~~lV~~N~s~ 434 (680)
T 1cyg_A 392 SLRRNNPALAYGDTEQRWINGDVYVYERQFGKDVVLVAVNRSS 434 (680)
T ss_dssp HHHHHCHHHHHCEEEEEEECSSEEEEEEEETTEEEEEEEECCS
T ss_pred HHHhhCHHHccCceEEEEeCCCEEEEEEEcCCcEEEEEEECCC
Confidence 9999999999999999888889999998 567888899863
|
| >2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-64 Score=521.83 Aligned_cols=356 Identities=15% Similarity=0.220 Sum_probs=262.4
Q ss_pred eeeccCceeEEEeeecCCCC-----CCcHHHHHhhhhhHHHcCCCEEEeCCCCCCCC-CCCcccccCCCCCCCCCCHHHH
Q 014892 22 AVIRNGREILFQGFNWESCK-----HDWWRNLERKVPDISKSGFTSVWLPPATHSFA-PEGYLPQNLYSLNSSYGSEHLL 95 (416)
Q Consensus 22 ~~~~~~~~~~~q~f~~~~~~-----~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~-~~GY~~~d~~~id~~~Gt~~d~ 95 (416)
|.++. +.+|||+|.+.+.. .|||+||+++|||||+||||+|||+||+++++ +|||+|.||++|+|+|||++||
T Consensus 3 ~~W~~-~~viYqi~~~~F~~~~~dg~Gdl~gi~~~Ldyl~~LGv~~I~l~Pi~~~~~~~~GY~~~dy~~idp~~Gt~~df 81 (543)
T 2zic_A 3 KHWWH-KATVYQIYPKSFMDTNGDGIGDLKGITSKLDYLQKLGVMAIWLSPVYDSPMDDNGYDIANYEAIADIFGNMADM 81 (543)
T ss_dssp CCGGG-GCCEEEECGGGTCCSSSSSSCCHHHHHHTHHHHHHHTCSEEEECCCEECCCTTTTSSCSEEEEECGGGCCHHHH
T ss_pred ccchh-hCeEEEEEcHHhcCCCCCCccCHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCCCcccccccCcccCCHHHH
Confidence 34444 49999999988764 38999999999999999999999999999986 6999999999999999999999
Q ss_pred HHHHHHHHHCCCEEEEEEccccCcCCCCCCC-------Cccc---ccCCCCCCCCCC---ceecCCCCCCCCCCCCCCCC
Q 014892 96 KALLHKMKQHKVRAMADIVINHRVGTTQGHG-------GKYN---RYDGIPLSWDEH---AVTSCTGGLGNGSTGDNFHG 162 (416)
Q Consensus 96 ~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~-------~~~~---~f~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 162 (416)
++||++||++||+||||+|+||++..|+|+. +.|. .+.+.+.+|... ..+.+.+...+.....+...
T Consensus 82 ~~lv~~~h~~Gi~VilD~V~NH~s~~~~~f~~~~~~~~~~y~d~y~~~~~p~~~~~~f~~~~w~~~~~~~~~y~~~f~~~ 161 (543)
T 2zic_A 82 DNLLTQAKMRGIKIIMDLVVNHTSDEHAWFIEAREHPDSSERDYYIWCDQPNDLESIFGGSAWQYDDKSDQYYLHFFSKK 161 (543)
T ss_dssp HHHHHHHHTTTCEEEEEECCSBCCTTSHHHHHHHHCTTSGGGGGBCEESSCCSCBCTTSSBSEEEETTTTEEEECSSCTT
T ss_pred HHHHHHHHHCCCEEEEEEecCcccccchhhHhhhcCCCCCCcceeecCCCCCcccccCCCCCCcccCCCCcEEECcccCC
Confidence 9999999999999999999999999998642 2221 111111122110 00000000011111223467
Q ss_pred CCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcH--------------HHHHHHHHhcC---CceEEEcccCC
Q 014892 163 VPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSA--------------KYVKEYIEGAR---PIFSVGEYWDS 225 (416)
Q Consensus 163 ~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~--------------~~~~~~~~~~~---~~~~vgE~~~~ 225 (416)
+||||++||+||++|++++++|+ ++||||||||+|++++. +||+++++.++ +.+++||+|..
T Consensus 162 ~pdLN~~np~Vr~~i~~~~~~Wl-~~GvDGfRlDa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~vgE~~~~ 240 (543)
T 2zic_A 162 QPDLNWENANLRQKIYDMMNFWI-DKGIGGFRMDVIDMIGKIPAQHIVSNGPKLHAYLKEMNAASFGQHDLLTVGETWGA 240 (543)
T ss_dssp SCBBCTTCHHHHHHHHHHHHHHH-TTTCCEEEETTGGGTTCBGGGTBCSSCTTHHHHHHHHHHHTGGGSCCEEEEECTTC
T ss_pred CCccCcCCHHHHHHHHHHHHHHH-hcCCCEEEECCccceeecCCCccccccHHHHHHHHHHHHHHhccCCeEEEeeecCC
Confidence 99999999999999999999999 69999999999999875 89999987663 37899999965
Q ss_pred CCCCCCCCCCccchhhHhHhhhhccC-CCcccccCchhhHHHHHHh-c-------Cc--hhhhhhhcCCCCCccccccCc
Q 014892 226 CNYNSHGLDYNQDSHRQRIINWIDGT-GQLSAAFDFTTKGILQEAV-K-------GQ--FWRLRDAQGKPPGVMGWWPSR 294 (416)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~fdf~~~~~l~~~~-~-------~~--~~~~~~~~~~~~~~~~~~p~~ 294 (416)
. ...+..|+... .+++++|+|.+.. .... . +. ...+...+......+...+..
T Consensus 241 ~--------------~~~~~~y~~~~~~~~~~~~~f~~~~--~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 304 (543)
T 2zic_A 241 T--------------PEIAKQYSNPVNHELSMVFQFEHIG--LQHKPEAPKWDYVKELNVPALKTIFNKWQTELELGQGW 304 (543)
T ss_dssp C--------------HHHHHHHHCGGGCSCSEEECCTTGG--GGBCTTSCTTSBCSSCCHHHHHHHHHHHHHHSCTTTCC
T ss_pred C--------------HHHHHHHhCCCCCccceEecchhhc--cccccccccccccCCCCHHHHHHHHHHHHHhcccCCCe
Confidence 2 24556676542 4577888887531 1110 0 11 112221111000000001234
Q ss_pred ceecccCCCCCCCCCCCCCCh----hhHHHHHHHHhcCCCeeEEecCCcCCCc---------------------------
Q 014892 295 AVTFLDNHDTGSTQAHWPFPS----NHIMEGYAYILMHPGIPSVFYDHFYDWG--------------------------- 343 (416)
Q Consensus 295 ~~~fl~nHD~~R~~~~~~~~~----~~~~~a~a~llt~pGiP~Iy~G~E~gw~--------------------------- 343 (416)
.++|++|||++|+.+.++.+. .++++|++++||+||+|+||||+|+|..
T Consensus 305 ~~~f~~nHD~~R~~~~~~~~~~~~~~~~k~a~~~llt~pG~P~iy~G~E~G~~~~~~~~~~~~~D~~~~n~~~~~~~~g~ 384 (543)
T 2zic_A 305 NSLFWNNHDLPRVLSIWGNTGKYREKSAKALAILLHLMRGTPYIYQGEEIGMTNYPFKDLNELDDIESLNYAKEAFTNGK 384 (543)
T ss_dssp CEECSCCTTSCCHHHHTSCSSTTHHHHHHHHHHHHHTSSSEEEEETTGGGTCCCCCCCSSTTCCCHHHHHHHHHHHTTTC
T ss_pred eeeeecCCCCccchhhcCCchhhhHHHHHHHHHHHHhCCCceEEEeccccCCCCCCCCCHHHcCCHHHhhhHHHHHhcCC
Confidence 678999999999877665332 2689999999999999999999997621
Q ss_pred ---------------------------------------------------------hhHHHHHHHHHHHHHhCcccCCC
Q 014892 344 ---------------------------------------------------------DSIHNQIVKLMDVRRQQDIHSRS 366 (416)
Q Consensus 344 ---------------------------------------------------------~~l~~~~~~Li~lR~~~~~l~~G 366 (416)
.+++++||+||+|||++|+|+.|
T Consensus 385 ~~~~~~~~~~~~~rd~~R~pm~W~~~~~agFs~~~~pwl~~~~~y~~~nv~~q~~~~~s~~~~~~~Li~lRk~~~al~~G 464 (543)
T 2zic_A 385 SMETIMDSIRMIGRDNARTPMQWDASQNAGFSTADKTWLPVNPNYKDINVQAALKNSNSIFYTYQQLIQLRKENDWLVDA 464 (543)
T ss_dssp CHHHHHHHHHHHCGGGGCSCCCCCSSGGGGTCSSSSCSSCCCGGGGTSCHHHHHHSTTSHHHHHHHHHHHHHHCTHHHHC
T ss_pred CHHHHHHHHHhhCCCCCcCCcccCCCCCCCCCCCCCCCcCCCCCcCccCHHHHHhchhhHHHHHHHHHHHHhcChhhhcC
Confidence 24889999999999999999999
Q ss_pred CeEEEEecCCEEEEEE---CCEEEEEEcCCCC
Q 014892 367 SIKILEAQSNLYSAII---GDKVCMKIGDGSW 395 (416)
Q Consensus 367 ~~~~~~~~~~~~~~~R---~~~~lvvinn~~~ 395 (416)
+++.+..++++++|.| +++++||+|.+..
T Consensus 465 ~~~~~~~~~~v~a~~R~~~~~~~lvv~N~s~~ 496 (543)
T 2zic_A 465 DFELLPTADKVFAYLRKVREERYLIVVNVSDQ 496 (543)
T ss_dssp CCEECCCCTTEEEEEEEETTEEEEEEEECSSS
T ss_pred ceEEecCCCcEEEEEEEeCCcEEEEEEECCCC
Confidence 9998855568999998 4678889998754
|
| >4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-64 Score=520.93 Aligned_cols=371 Identities=16% Similarity=0.231 Sum_probs=255.6
Q ss_pred eeeeccCceeEEEeeecCCCCC-----CcHHHHHhhhhhHHHcCCCEEEeCCCCCCCC-CCCcccccCCCCCCCCCCHHH
Q 014892 21 RAVIRNGREILFQGFNWESCKH-----DWWRNLERKVPDISKSGFTSVWLPPATHSFA-PEGYLPQNLYSLNSSYGSEHL 94 (416)
Q Consensus 21 ~~~~~~~~~~~~q~f~~~~~~~-----G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~-~~GY~~~d~~~id~~~Gt~~d 94 (416)
.+.|+.+ +||||+|.+.++.. |||+||++||||||+||||+||||||+++++ +|||+|+||++|||+|||++|
T Consensus 3 ~~~Ww~~-~viYei~~~~F~d~~~dg~Gdl~Gi~~kLdYLk~LGvt~I~L~Pi~~~~~~~~GYd~~dy~~vdp~~Gt~~d 81 (549)
T 4aie_A 3 SASWWKN-AVVYQVYPKSFQDSNGDGIGDLQGIISRLDYLEKLGIDAIWLSPVYQSPGVDNGYDISDYEAIDPQYGTMAD 81 (549)
T ss_dssp -CCGGGS-CCEEEECGGGTCCSSSSSSCCHHHHHTTHHHHHHHTCSEEEECCCEECCCTTTTSSCSEEEEECTTTCCHHH
T ss_pred Cchhhcc-CeEEEEEcchhcCCCCCCCcCHHHHHHhhHHHHHCCCCEEEeCCCcCCCCCCCCcCccCCCCcCcccCCHHH
Confidence 3556665 99999999988654 8999999999999999999999999999975 899999999999999999999
Q ss_pred HHHHHHHHHHCCCEEEEEEccccCcCCCCCCC-------Cccc---ccCCC-----CCCCCCC---ceecCCCCCCCCCC
Q 014892 95 LKALLHKMKQHKVRAMADIVINHRVGTTQGHG-------GKYN---RYDGI-----PLSWDEH---AVTSCTGGLGNGST 156 (416)
Q Consensus 95 ~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~-------~~~~---~f~~~-----~~~~~~~---~~~~~~~~~~~~~~ 156 (416)
||+||++||++||+||||+|+||+|.+|+|+. ..|. .+.+. +.+|... ....+.........
T Consensus 82 fk~Lv~~aH~~Gi~VilD~V~NHts~~~~wf~~~~~~~~~~~~~~y~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (549)
T 4aie_A 82 MDELISKAKEHHIKIVMDLVVNHTSDQHKWFVEAKKGKDNQYRDYYIWRDPVDEHEPNDLKSAFSGSAWKYDERSGQYYL 161 (549)
T ss_dssp HHHHHHHHHHTTCEEEEEECCSBCCTTSHHHHHHTTCTTSTTGGGBCEECCBTTBCSSCCBCTTSSBSEEEETTTTEEEE
T ss_pred HHHHHHHHHHCCCEEEEEECccCCcCCcchhhhhhhcccccccccccccCCcccCCCCCcccccCCCcccccccCCceEe
Confidence 99999999999999999999999999998642 1111 11110 0011100 00000001111112
Q ss_pred CCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcHHHH--------------HHHHHhc---CCceEE
Q 014892 157 GDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYV--------------KEYIEGA---RPIFSV 219 (416)
Q Consensus 157 ~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~~~~--------------~~~~~~~---~~~~~v 219 (416)
..+...+||||++||+|+++|++++++|+ ++||||||+|+|++++.+++ +.+.+.. .+.+++
T Consensus 162 ~~f~~~~~dln~~np~v~~~i~~~~~~W~-e~gvDGfRlD~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 240 (549)
T 4aie_A 162 HFFADQQPDLNWQNTELRQKIYNMMNFWL-DKGIGGFRMDVIELIGKDPDKNIRENGPMLHPYLQEMNKATFGKRDVMTV 240 (549)
T ss_dssp CSSCTTSCBBCTTCHHHHHHHHHHHHHHH-HTTCCEEEETTGGGTTCBGGGTBCTTCTTHHHHHHHHHHHTTTTTCCEEE
T ss_pred cccCCCCCccccCCHHHHHHHHHHHHHHH-HhcCCceeEecHHhccccchhhhcccccccchHHHhhhhccccccceeee
Confidence 23457899999999999999999999998 79999999999999875433 3333322 247899
Q ss_pred EcccCCCCCCCCCCCCccchhhHhHhhhhccC-CCcccccCchhhHHHHHHhcCc---------hhhhhhhcCCCCCccc
Q 014892 220 GEYWDSCNYNSHGLDYNQDSHRQRIINWIDGT-GQLSAAFDFTTKGILQEAVKGQ---------FWRLRDAQGKPPGVMG 289 (416)
Q Consensus 220 gE~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~fdf~~~~~l~~~~~~~---------~~~~~~~~~~~~~~~~ 289 (416)
||.|... ...+..|.+.. ......|+|... ......+. ...+............
T Consensus 241 gE~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (549)
T 4aie_A 241 GETWNAT--------------PKIAEEYSDPDRHELSMVFQFENQ--SLDQQPGKEKWDLKPLDLGELKKVLVKWQTKID 304 (549)
T ss_dssp EECTTCC--------------HHHHHHHHCGGGCSCSEEECCGGG--GGGBCTTSCTTSBCCCCHHHHHHHHHHHHHSSC
T ss_pred ecccCCC--------------HHHHHHhcCCcccccccccccccc--ccccccccccccccccchHHHHHHHHHhhhhcc
Confidence 9999752 23333443321 123333443321 11100000 0000000000000001
Q ss_pred cccCcceecccCCCCCCCCCCCCCC----hhhHHHHHHHHhcCCCeeEEecCCcCCC-----------------------
Q 014892 290 WWPSRAVTFLDNHDTGSTQAHWPFP----SNHIMEGYAYILMHPGIPSVFYDHFYDW----------------------- 342 (416)
Q Consensus 290 ~~p~~~~~fl~nHD~~R~~~~~~~~----~~~~~~a~a~llt~pGiP~Iy~G~E~gw----------------------- 342 (416)
..+...++|++|||++|+.+.++.+ .++.+++++++||+||+|+||||+|+|.
T Consensus 305 ~~~~~~~~f~~nHD~~r~~s~~~~~~~~~~~~~~~~~~~~~~~pG~P~iy~G~E~g~~~~~~~~~~~~~d~~~~~~~~~~ 384 (549)
T 4aie_A 305 FDHAWNSLFWENHDIPRVISRWGNDQEYRVQCAKMFAIILHMMHGTPYIFNGEEIGMTNCPVKNIDEVEDIESINMYNER 384 (549)
T ss_dssp TTSCCCEECSCCTTSCCHHHHHSCCSTTHHHHHHHHHHHHHTSSSEEEEETTGGGTCCCCCCSSGGGCCCHHHHHHHHHH
T ss_pred ccccccceeeccCCchhhhhhcCCcHHHHHHHHHHHHHHHhcCCCceEEEcchhhCccCCCCCChhhcCCHHHHhhHHHH
Confidence 1223457899999999977654432 3467889999999999999999999863
Q ss_pred ----------------------------c--------------------------------hhHHHHHHHHHHHHHhCcc
Q 014892 343 ----------------------------G--------------------------------DSIHNQIVKLMDVRRQQDI 362 (416)
Q Consensus 343 ----------------------------~--------------------------------~~l~~~~~~Li~lR~~~~~ 362 (416)
+ .+++++||+||+|||++|+
T Consensus 385 ~~~g~~~~~~~~~~~~~~r~~~R~~m~W~~~~~~gfs~~~~~~~~~~~~~~~nv~~q~~d~~Sll~~~r~Li~lRk~~pa 464 (549)
T 4aie_A 385 LAEGYDEEELIHAINVKGRDNARRPMQWNDEKNAGFSEVDPWLSVNPNYKDINVENALADPNSIFYTYQKLIKLRHENPI 464 (549)
T ss_dssp HHTTCCHHHHHHHHHHHCGGGGCSCCCCSSSGGGGSCSSCCSSCCCGGGGTSSHHHHHHCTTSHHHHHHHHHHHHHHCHH
T ss_pred HhcCCCHHHHHhhhhccCCccccCCCCCCCCCCCCCCCCCccccCCcchhhhhHHHHHhCcchHHHHHHHHHHHHhhCHH
Confidence 1 1278999999999999999
Q ss_pred cCCCCeEEEEec-CCEEEEEE---CCEEEEEEcCCCCC---CCCCCcEEeeeCC
Q 014892 363 HSRSSIKILEAQ-SNLYSAII---GDKVCMKIGDGSWC---PAGKEWTLATSGH 409 (416)
Q Consensus 363 l~~G~~~~~~~~-~~~~~~~R---~~~~lvvinn~~~~---~~~~~~~~~ls~~ 409 (416)
|+.|+++.+..+ ++|+||.| +++++||+|.++.. +....|+.+++..
T Consensus 465 l~~G~~~~~~~~~~~v~a~~R~~~~~~~lvv~N~s~~~~~~~~~~~~~~ll~~~ 518 (549)
T 4aie_A 465 VVDGDFSLVSNTQDAVLAYYRILNDKKWLVVANLSNEEQNFVSNDQIETILSNY 518 (549)
T ss_dssp HHHCEEEECTTCCTTEEEEEEEETTEEEEEEEECSSSCEEEECCCCEEEEEESS
T ss_pred hhCCceEEEecCCCcEEEEEEEeCCCEEEEEEECCCCCEEEeCCCCeEEEccCC
Confidence 999999988765 46999988 56788889987643 2234566666643
|
| >3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-64 Score=531.19 Aligned_cols=350 Identities=15% Similarity=0.265 Sum_probs=264.8
Q ss_pred cCceeEEEeeecCCCC-----------------------CCcHHHHHhhhh--hHHHcCCCEEEeCCCCCC---------
Q 014892 26 NGREILFQGFNWESCK-----------------------HDWWRNLERKVP--DISKSGFTSVWLPPATHS--------- 71 (416)
Q Consensus 26 ~~~~~~~q~f~~~~~~-----------------------~G~~~gi~~~Ld--yLk~LGv~~I~L~Pi~~~--------- 71 (416)
-.++||||+|.+.+.. .|||+||+++|| |||+||||+|||+||+++
T Consensus 12 ~~~~viYqi~~~~F~d~~~~n~~~~~~~dg~~~~~~~~~gGdl~gi~~kLd~~yLk~LGvtaIwL~Pi~~~~~~~~~~~g 91 (683)
T 3bmv_A 12 YSTDVIYQIVTDRFVDGNTSNNPTGDLYDPTHTSLKKYFGGDWQGIINKINDGYLTGMGVTAIWIPQPVENIYAVLPDST 91 (683)
T ss_dssp CTTCCEEECCGGGTCCCCGGGSCCGGGBCTTSCSTTSBCCCCHHHHHHHHHTSTTGGGTCCEEEECCCEEECCCCEEETT
T ss_pred CccCcEEEEecccccCCCCCCCCCCcccCCCccccccccCcCHHHHHHhcCHHHHHHcCCCEEEeCccccCccccccccc
Confidence 3668999999987642 189999999999 999999999999999984
Q ss_pred ----CCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccccCcCCCC---CCCCcccccCC------CC--
Q 014892 72 ----FAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQ---GHGGKYNRYDG------IP-- 136 (416)
Q Consensus 72 ----~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~---~~~~~~~~f~~------~~-- 136 (416)
.++|||+|.|||+|+|+|||++||++||++||++||+||||+|+||++..+. ++......+.+ .+
T Consensus 92 ~~g~~~~~GYd~~dy~~idp~~Gt~~dfk~Lv~~aH~~GikVilD~V~NHts~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 171 (683)
T 3bmv_A 92 FGGSTSYHGYWARDFKRTNPYFGSFTDFQNLINTAHAHNIKVIIDFAPNHTSPASETDPTYAENGRLYDNGTLLGGYTND 171 (683)
T ss_dssp TEEECSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECTTEEEECCSSCTTSTTTTCEEETTEEEECSTTC
T ss_pred ccCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEcccccccccccCcchhccCccccCCcccccCCCC
Confidence 3689999999999999999999999999999999999999999999999873 22111000000 00
Q ss_pred --CCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcHHHHHHHHHhcC
Q 014892 137 --LSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGAR 214 (416)
Q Consensus 137 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~~~~~~~~~~~~ 214 (416)
..|+......+.+.. ....+.+.++||||++||+||++|++++++|++ +||||||||+|++++.+||++++++++
T Consensus 172 ~~~~f~~~~~~~w~~~~--~~~y~~~~~~pdLn~~np~Vr~~i~~~l~~Wl~-~GVDGfRlDa~~~i~~~f~~~~~~~v~ 248 (683)
T 3bmv_A 172 TNGYFHHYGGTDFSSYE--DGIYRNLFDLADLNQQNSTIDSYLKSAIKVWLD-MGIDGIRLDAVKHMPFGWQKNFMDSIL 248 (683)
T ss_dssp TTCCBCCSCBCCCSSHH--HHHHSBSTTEEEBCTTSHHHHHHHHHHHHHHHH-TTCCEEEESCGGGSCHHHHHHHHHHHH
T ss_pred cccccccCCCCCcCCcc--cccccCcCCCCCcccCCHHHHHHHHHHHHHHHh-CCCCEEEEeccccCCHHHHHHHHHHHH
Confidence 001110000010000 001233457999999999999999999999995 999999999999999999999987764
Q ss_pred ---CceEEEcccCCCCCCCCCCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHhcC---chhhhhhhcCCCCCcc
Q 014892 215 ---PIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKG---QFWRLRDAQGKPPGVM 288 (416)
Q Consensus 215 ---~~~~vgE~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~~~---~~~~~~~~~~~~~~~~ 288 (416)
+.+++||.|.... . . ...+..|.+.. + .++|||+++..+.+++.+ ....+.+.+......+
T Consensus 249 ~~~~~~~vgE~~~~~~-----~-~-----~~~~~~~~~~~-~-~~~~df~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~ 315 (683)
T 3bmv_A 249 SYRPVFTFGEWFLGTN-----E-I-----DVNNTYFANES-G-MSLLDFRFSQKVRQVFRDNTDTMYGLDSMIQSTASDY 315 (683)
T ss_dssp HHSCCEEEECCCCCTT-----C-C-----CHHHHHHHHHS-S-SEEBCHHHHHHHHHHHTSCSSCHHHHHHHHHHHHHHC
T ss_pred hcCCceEEccccCCCc-----c-c-----chhhhhhhccC-C-CceECchHHHHHHHHHhcCCCCHHHHHHHHHHHHHhc
Confidence 6899999987521 0 0 02233444322 2 367999999999888743 2233333221000000
Q ss_pred ccccCcceecccCCCCCCCCCCCCCChhhHHHHHHHHhcCCCeeEEecCCcCCC-----------------chhHHHHHH
Q 014892 289 GWWPSRAVTFLDNHDTGSTQAHWPFPSNHIMEGYAYILMHPGIPSVFYDHFYDW-----------------GDSIHNQIV 351 (416)
Q Consensus 289 ~~~p~~~~~fl~nHD~~R~~~~~~~~~~~~~~a~a~llt~pGiP~Iy~G~E~gw-----------------~~~l~~~~~ 351 (416)
..+...++|++|||++|+. ...+.+++++|++++|++||+|+||||+|+|. ..+++++||
T Consensus 316 -~~~~~~~~fl~NHD~~R~~--~~~~~~~~~~a~a~llt~pG~P~IYyG~E~g~~~~~d~~~R~~~~~~~~~~~~~~~~~ 392 (683)
T 3bmv_A 316 -NFINDMVTFIDNHDMDRFY--NGGSTRPVEQALAFTLTSRGVPAIYYGTEQYMTGNGDPYNRAMMTSFNTSTTAYNVIK 392 (683)
T ss_dssp -TTGGGCEECSCCSSSCCSC--CSSCSHHHHHHHHHHHHSSSEEEEETTGGGTCCCCSTTGGGCCCCCCCTTSHHHHHHH
T ss_pred -cchhhceeeccCCCCcccc--cCCCHHHHHHHHHHHHhCCCCCEEEeeeeecccCCCCccccccCCCccCCcHHHHHHH
Confidence 1245789999999999988 44456689999999999999999999999863 236899999
Q ss_pred HHHHHHHhCcccCCCCeEEEEecCCEEEEEE---CCEEEEEEcCCC
Q 014892 352 KLMDVRRQQDIHSRSSIKILEAQSNLYSAII---GDKVCMKIGDGS 394 (416)
Q Consensus 352 ~Li~lR~~~~~l~~G~~~~~~~~~~~~~~~R---~~~~lvvinn~~ 394 (416)
+|++|||++|+|+.|+++.+..++++++|.| +++++|++|++.
T Consensus 393 ~Li~lRk~~~al~~G~~~~~~~~~~v~af~R~~~~~~~lV~~N~~~ 438 (683)
T 3bmv_A 393 KLAPLRKSNPAIAYGTTQQRWINNDVYIYERKFGNNVALVAINRNL 438 (683)
T ss_dssp HHTTHHHHCHHHHHCEEEEEEECSSEEEEEEEETTEEEEEEEECCS
T ss_pred HHHHHHhhCHHhhcCcEEEEeeCCCEEEEEEEcCCeEEEEEEECCC
Confidence 9999999999999999999888889999998 567888899864
|
| >3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-63 Score=514.20 Aligned_cols=363 Identities=24% Similarity=0.515 Sum_probs=266.5
Q ss_pred eeccCceeEEEeeecC-----C-----CCCCcHHHHHhhhhhHHHcCCCEEEeCCCCCCCC---CCCcccccCCC-----
Q 014892 23 VIRNGREILFQGFNWE-----S-----CKHDWWRNLERKVPDISKSGFTSVWLPPATHSFA---PEGYLPQNLYS----- 84 (416)
Q Consensus 23 ~~~~~~~~~~q~f~~~-----~-----~~~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~---~~GY~~~d~~~----- 84 (416)
+-|..++||||+|.|. + ...|+|+||+++|||||+||||+|||+||+++.+ +|||++.|||+
T Consensus 117 p~w~~~~viyq~F~w~~~~~~f~~~~~~~gG~~~gi~~~LdyLk~LGvtaIwL~Pi~~~~s~~~~~GYd~~dy~~l~e~~ 196 (599)
T 3bc9_A 117 PDQEVNHTILQAFYWEMNTGEYATEHPEEANLWNLLAERAPELAEAGFTAVWLPPANKGMAGIHDVGYGTYDLWDLGEFD 196 (599)
T ss_dssp CGGGCCCCEEECCCTTTTSHHHHHHCGGGGGHHHHHHHHHHHHHHHTCCEEECCCCSEETTGGGCCSCSEEETTCSSCSC
T ss_pred chhhcCceEEEEeeccccccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCCCCChhhcccccccc
Confidence 3455679999999998 2 2348999999999999999999999999999664 59999999996
Q ss_pred ----CCCCCCCHHHHHHHHHHHHHCCCEEEEEEccccCcC--CCCCCCC----c---------ccc--cCCCC-----CC
Q 014892 85 ----LNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVG--TTQGHGG----K---------YNR--YDGIP-----LS 138 (416)
Q Consensus 85 ----id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~--~~~~~~~----~---------~~~--f~~~~-----~~ 138 (416)
|+|+|||++||++||++||++||+||||+|+||++. .++|+.. . |.. |.+.. ..
T Consensus 197 q~g~idp~~Gt~~dfk~Lv~~aH~~GI~VilD~V~NH~~~~~~~~wf~~~~~~~~~~~~~~~~w~~~~~pg~~~~Y~~~~ 276 (599)
T 3bc9_A 197 QKGTVRTKYGTKGELENAIDALHNNDIKVYFDAVLNHRMGADYAETVLLDENSRDKPGQYIKAWTGFNFPGRNGEYSNFT 276 (599)
T ss_dssp BTTBSSBTTBCHHHHHHHHHHHHHTTCEEEEEECCSEECSCSEEEEEEBCTTCSSSTTCEEEEEEEBCCTTTTTSSCCCC
T ss_pred cccccCCCCCCHHHHHHHHHHHHHCCCEEEEEECcCCCCCCcCCccccccccCCCCCcccccccccccCCCCCCCCccCc
Confidence 999999999999999999999999999999999964 3444311 0 000 00000 01
Q ss_pred CCCCcee--cC-------------CCCCCC-CCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCc
Q 014892 139 WDEHAVT--SC-------------TGGLGN-GSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYS 202 (416)
Q Consensus 139 ~~~~~~~--~~-------------~~~~~~-~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~ 202 (416)
|+..++. .+ ...|.. ...++.+..+||||++||+||++|++++++|++++||||||+|+|++++
T Consensus 277 ~~w~~f~g~d~~~~~~~~~~f~~~~~~W~~~~~~~~~~~~~pdLn~~np~Vr~~l~~~l~~Wl~e~GVDGfRlDaa~~i~ 356 (599)
T 3bc9_A 277 WNGQCFDGTDWDDYSKESGKYLFDEKSWDWTYNWDEDYLMGADVDYENEAVQNDVIDWGQWIINNIDFDGFRLDAVKHID 356 (599)
T ss_dssp BCGGGEEEEEEETTTTEEEEEEBTTCCCCCCSSTTCSCCSSEEECTTCHHHHHHHHHHHHHHHHTTCCCEEEETTGGGSC
T ss_pred cccccCCCCCCccccccccccccCCCCcccccCCccccccCCCcCCCCHHHHHHHHHHHHHHHHcCCCCEEEecccccCC
Confidence 1101100 00 111211 0123456678999999999999999999999988999999999999999
Q ss_pred HHHHHHHHHhcC----C-ceEEEcccCCCCCCCCCCCCccchhhHhHhhhhccCC-CcccccCchhhHHHHHHhcCchhh
Q 014892 203 AKYVKEYIEGAR----P-IFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTG-QLSAAFDFTTKGILQEAVKGQFWR 276 (416)
Q Consensus 203 ~~~~~~~~~~~~----~-~~~vgE~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~fdf~~~~~l~~~~~~~~~~ 276 (416)
.+||++++++++ | .+++||+|... ...+..|+...+ +..++|||++...+.+++.+. .
T Consensus 357 ~~f~~~~~~~l~~~~~p~~~~igE~~~~~--------------~~~~~~y~~~~~~~~~~~fdf~~~~~~~~~~~g~--~ 420 (599)
T 3bc9_A 357 YRFIDKWMSAVQNSSNRDVFFVGEAWVED--------------VDDLKGFLDTVGNPDLRVFDFPLRSFFVDMLNGA--Y 420 (599)
T ss_dssp HHHHHHHHHHHHHTCSSCCEEEECCCCCS--------------HHHHHHHHHHHCCTTEEEECHHHHHHHHHHTTCC--C
T ss_pred HHHHHHHHHHHHHhhCCCeEEEEcccCCC--------------HHHHHHHhcccCCccceecChHHHHHHHHHhcch--h
Confidence 999999988753 3 78999999762 345556665432 357899999998888887543 2
Q ss_pred hhhhcCCCCCccc--cccCcceecccCCCCCCCCCCCCCCh-hhHHHHHHHHh-cCCCeeEEecCCcCCCchhHHHHHHH
Q 014892 277 LRDAQGKPPGVMG--WWPSRAVTFLDNHDTGSTQAHWPFPS-NHIMEGYAYIL-MHPGIPSVFYDHFYDWGDSIHNQIVK 352 (416)
Q Consensus 277 ~~~~~~~~~~~~~--~~p~~~~~fl~nHD~~R~~~~~~~~~-~~~~~a~a~ll-t~pGiP~Iy~G~E~gw~~~l~~~~~~ 352 (416)
+...... .+.. ..|..+++|++|||++|+.+...... .+.++|+|+++ ++||+|+||||+|+|.. +..+||+
T Consensus 421 l~~~~~~--~~~~~~~~p~~~v~fl~NHD~~R~~s~~~~~~~~~~~lA~a~ll~t~pG~P~IyyG~E~G~~--~~~~~~~ 496 (599)
T 3bc9_A 421 MADLRNA--GLVNSPGYENRAVTFVDNHDTDRDEGSYTVSIYSRKYQAYAYILTRAEGVPTVYWKDYYIWE--MKEGLDK 496 (599)
T ss_dssp GGGGGSC--SGGGSTTTGGGEEECSCCTTTSCSSSCSSCCCCSSHHHHHHHHHHCSSSEEEEEHHHHHTSC--CHHHHHH
T ss_pred HHHHHHH--HHhhccCCchhheeEecCCCCCccccccccHhHHHHHHHHHHHHHcCCCceEEEechhhCCc--hHHHHHH
Confidence 2222221 1111 13667899999999999987632221 34788988865 68999999999999984 7789999
Q ss_pred HHHHHHhCcccCCCCeEEEE-ecCCEEEEEE--CC-----EEEEEEcC-CCC---C------CCCCCcEEeeeC
Q 014892 353 LMDVRRQQDIHSRSSIKILE-AQSNLYSAII--GD-----KVCMKIGD-GSW---C------PAGKEWTLATSG 408 (416)
Q Consensus 353 Li~lR~~~~~l~~G~~~~~~-~~~~~~~~~R--~~-----~~lvvinn-~~~---~------~~~~~~~~~ls~ 408 (416)
|++|||++ +.|.++.+. .++++++|.| ++ ..++|++| +.. . ..++.|++++++
T Consensus 497 Li~lRk~~---~~G~~~~~~~~~~~v~af~R~~~~~~~~~~~vvvi~N~~~~~~~~~~v~~~~~~g~~~dll~~ 567 (599)
T 3bc9_A 497 LLTARRYY---AYGPGYEVDNNDADIYSYVRSGFPDVAGDGLVLMISDGTSGNVAGKWINSRQPDTEFYDLTGH 567 (599)
T ss_dssp HHHHHHHT---CCSCEEECSCCCSSEEEEEECCCTTSTTCCEEEEEECCCSCCEEEEEEECSCTTCEEEETTSC
T ss_pred HHHHHHHh---ccCCeEEEEeCCCCEEEEEEECCCCccCCCEEEEEEeCCCCCceeEEEEecCCCCEEEEccCC
Confidence 99999997 588888776 5678999998 22 25555544 433 1 134568887775
|
| >1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-63 Score=517.55 Aligned_cols=371 Identities=19% Similarity=0.238 Sum_probs=264.3
Q ss_pred eeeccCceeEEEeeecCCCC-----CCcHHHHHhhhhhHHHcCCCEEEeCCCCCCCC-CCCcccccCCCCCCCCCCHHHH
Q 014892 22 AVIRNGREILFQGFNWESCK-----HDWWRNLERKVPDISKSGFTSVWLPPATHSFA-PEGYLPQNLYSLNSSYGSEHLL 95 (416)
Q Consensus 22 ~~~~~~~~~~~q~f~~~~~~-----~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~-~~GY~~~d~~~id~~~Gt~~d~ 95 (416)
+.++. +.||||+|.+.++. .|||+||+++|||||+||||+||||||++++. +|||+|+||++|+|+|||++||
T Consensus 17 ~~w~~-~~viYqi~~~~F~d~~~dg~Gdl~gi~~~LdyL~~LGv~~I~l~Pi~~~~~~~~GYd~~dy~~idp~~Gt~~df 95 (570)
T 1m53_A 17 PAWWK-EAVFYQIYPRSFKDTNDDGIGDIRGIIEKLDYLKSLGIDAIWINPHYDSPNTDNGYDISNYRQIMKEYGTMEDF 95 (570)
T ss_dssp CCHHH-HCCEEEECGGGTCCSSSSSSCCHHHHHHTHHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECGGGCCHHHH
T ss_pred chhHh-hCcEEEEechhhccCCCCCccCHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCCCcccccccCcccCCHHHH
Confidence 33444 59999999998764 38999999999999999999999999999986 6999999999999999999999
Q ss_pred HHHHHHHHHCCCEEEEEEccccCcCCCCCCC-------Ccc---cccCCC-----CCCCCCCc---eecCCCCCCCCCCC
Q 014892 96 KALLHKMKQHKVRAMADIVINHRVGTTQGHG-------GKY---NRYDGI-----PLSWDEHA---VTSCTGGLGNGSTG 157 (416)
Q Consensus 96 ~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~-------~~~---~~f~~~-----~~~~~~~~---~~~~~~~~~~~~~~ 157 (416)
++||++||++||+||||+|+||++..|+|+. +.| +.|.+. +.+|.... .+.+.....+....
T Consensus 96 ~~lv~~aH~~Gi~VilD~V~NH~s~~~~wf~~~~~~~~~~y~d~y~~~~~~~g~~p~~~~~~f~~~~w~~~~~~~~~y~~ 175 (570)
T 1m53_A 96 DSLVAEMKKRNMRLMIDVVINHTSDQHPWFIQSKSDKNNPYRDYYFWRDGKDNQPPNNYPSFFGGSAWQKDAKSGQYYLH 175 (570)
T ss_dssp HHHHHHHHHTTCEEEEEECCSBCCTTSHHHHHHHHCTTCTTGGGBCEECCSSSSCSSCCBCTTSSBSEEECTTTCCEEEC
T ss_pred HHHHHHHHHCCCEEEEEEeccccccccHHHHHhhcCCCCCCccceeecCCCCCCCCccccccCCCccccccCCCCcEEEC
Confidence 9999999999999999999999999998642 222 112110 11121100 00000100111112
Q ss_pred CCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcH--------------------------HHHHHHHH
Q 014892 158 DNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSA--------------------------KYVKEYIE 211 (416)
Q Consensus 158 ~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~--------------------------~~~~~~~~ 211 (416)
.+...+||||++||+||++|++++++|+ ++||||||||+|++++. +||+++++
T Consensus 176 ~f~~~~pdLN~~np~Vr~~l~~~~~~Wl-~~gvDGfRlDa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 254 (570)
T 1m53_A 176 YFARQQPDLNWDNPKVREDLYAMLRFWL-DKGVSGMRFDTVATYSKIPGFPNLTPEQQKNFAEQYTMGPNIHRYIQEMNR 254 (570)
T ss_dssp SSCTTCCBBCTTSHHHHHHHHHHHHHHH-TTTCCEEEETTGGGSSCCTTCCCCCHHHHHTHHHHTTCCTTHHHHHHHHHH
T ss_pred cccCcCCccCCCCHHHHHHHHHHHHHHH-HcCCCEEEEccccccccccccccCCCcccccccccccCchHHHHHHHHHHH
Confidence 2236789999999999999999999999 69999999999988764 57888877
Q ss_pred hcC---CceEEEcccCCCCCCCCCCCCccchhhHhHhhhhcc-CCCcccccCchhhHHHH---HHhc-C--chhhhhhhc
Q 014892 212 GAR---PIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDG-TGQLSAAFDFTTKGILQ---EAVK-G--QFWRLRDAQ 281 (416)
Q Consensus 212 ~~~---~~~~vgE~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~fdf~~~~~l~---~~~~-~--~~~~~~~~~ 281 (416)
+++ +.+++||+|... ...+..|+.. .++++++|+|.+...-. +.+. + +...+...+
T Consensus 255 ~v~~~~~~~~vgE~~~~~--------------~~~~~~y~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~l 320 (570)
T 1m53_A 255 KVLSRYDVATAGEIFGVP--------------LDRSSQFFDRRRHELNMAFMFDLIRLDRDSNERWRHKSWSLSQFRQII 320 (570)
T ss_dssp HTGGGSCCEEEEECTTCC--------------GGGTHHHHCGGGCSCSEEECCTTTTTTBCSSCTTCBCCCCHHHHHHHH
T ss_pred HHhccCCeEEEecccCCC--------------HHHHHHHhcccCcccceeechhhhhcccccccccccCCCCHHHHHHHH
Confidence 553 478999999642 1344456543 24577788887541100 0010 1 111222111
Q ss_pred CCCCCccccccCcceecccCCCCCCCCCCCCCCh-----hhHHHHHHHHhcCCCeeEEecCCcCCCc-------------
Q 014892 282 GKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFPS-----NHIMEGYAYILMHPGIPSVFYDHFYDWG------------- 343 (416)
Q Consensus 282 ~~~~~~~~~~p~~~~~fl~nHD~~R~~~~~~~~~-----~~~~~a~a~llt~pGiP~Iy~G~E~gw~------------- 343 (416)
....... ..+...++|++|||++|+.+.++... +++++|++++||+||+|+||||+|+|..
T Consensus 321 ~~~~~~~-~~~~~~~~fl~nHD~~R~~~~~~~~~~~~~~~~~k~~~~~llt~pG~P~iy~G~E~G~~~~~~~~~~~~~D~ 399 (570)
T 1m53_A 321 SKMDVTV-GKYGWNTFFLDNHDNPRAVSHFGDDRPQWREASAKALATITLTQRATPFIYQGSELGMTNYPFRQLNEFDDI 399 (570)
T ss_dssp HHHHHHH-TTTCCBEECSCCTTSCCHHHHHSCCSTTTHHHHHHHHHHHHTSSSSEEEEETTTTTTCCCCCCCSGGGCCCH
T ss_pred HHHHHhc-ccCCcccccCCCCCchhhHHhhCCCchhHHHHHHHHHHHHHHhCCCCeEEEechhcCCCCCCCCCHHhccCH
Confidence 1000000 01234578999999999876554322 2589999999999999999999997521
Q ss_pred -----------------------------------------------------------------------hhHHHHHHH
Q 014892 344 -----------------------------------------------------------------------DSIHNQIVK 352 (416)
Q Consensus 344 -----------------------------------------------------------------------~~l~~~~~~ 352 (416)
.+++++||+
T Consensus 400 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~rd~~R~pm~W~~~~~agFs~~~pwl~~~~~~~~~nv~~q~~~~~s~~~~~~~ 479 (570)
T 1m53_A 400 EVKGFWQDYVQSGKVTATEFLDNVRLTSRDNSRTPFQWNDTLNAGFTRGKPWFHINPNYVEINAEREETREDSVLNYYKK 479 (570)
T ss_dssp HHHHHHHHHTTTTSSCHHHHHHHHHHHCGGGGCSCCCCSSSGGGGSCSSCCSSCCCGGGGTSCHHHHHHCTTSHHHHHHH
T ss_pred HHhcchhhhhhcCCccHHHHhhhhhcccCCCCCCCcccCCCCCCCCcCCCCCCcCCcccccccHHHhhhccchHHHHHHH
Confidence 258899999
Q ss_pred HHHHHHhCcccCCCCeEEEE-ecCCEEEEEE---CCEEEEEEcCCCCC-----CCCCC-cEEeeeCC
Q 014892 353 LMDVRRQQDIHSRSSIKILE-AQSNLYSAII---GDKVCMKIGDGSWC-----PAGKE-WTLATSGH 409 (416)
Q Consensus 353 Li~lR~~~~~l~~G~~~~~~-~~~~~~~~~R---~~~~lvvinn~~~~-----~~~~~-~~~~ls~~ 409 (416)
||+|||++|+|+.|+++.+. .++++++|.| +++++||+|.+... +..+. |++++++.
T Consensus 480 Li~lR~~~~~l~~G~~~~~~~~~~~v~a~~R~~~~~~~lvv~N~s~~~~~~~l~~~~~~~~~ll~~~ 546 (570)
T 1m53_A 480 MIQLRHHIPALVYGAYQDLNPQDNTVYAYTRTLGNERYLVVVNFKEYPVRYTLPANDAIEEVVIDTQ 546 (570)
T ss_dssp HHHHHHHCHHHHHSEEEESCTTCSSEEEEEEEETTEEEEEEEECSSSCEEEECCTTCCEEEEEEESC
T ss_pred HHHHHcCCchhhccceEEeecCCCCEEEEEEECCCcEEEEEEECCCCCEEEeccCCCccceEEeecC
Confidence 99999999999999998874 3567999998 56788899987643 22223 56776654
|
| >1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-63 Score=529.54 Aligned_cols=351 Identities=15% Similarity=0.255 Sum_probs=264.9
Q ss_pred cCceeEEEeeecCCCC-----------------------CCcHHHHHhhhh--hHHHcCCCEEEeCCCCCC---------
Q 014892 26 NGREILFQGFNWESCK-----------------------HDWWRNLERKVP--DISKSGFTSVWLPPATHS--------- 71 (416)
Q Consensus 26 ~~~~~~~q~f~~~~~~-----------------------~G~~~gi~~~Ld--yLk~LGv~~I~L~Pi~~~--------- 71 (416)
-.++||||+|.+.+.. .|||+||+++|| |||+||||+||||||+++
T Consensus 12 ~~~~viYqi~~~~F~d~~~~n~~~~~~~dg~~~~~~~~~gGdl~gi~~kLd~~yLk~LGvt~IwL~Pi~~~~~~~~~~~g 91 (686)
T 1d3c_A 12 FSTDVIYQIFTDRFSDGNPANNPTGAAFDGTCTNLRLYCGGDWQGIINKINDGYLTGMGVTAIWISQPVENIYSIINYSG 91 (686)
T ss_dssp CTTCCEEEECGGGTCCSCGGGCCCGGGBCTTCCSTTSBCCCCHHHHHHHHHTTTTGGGTCCEEEECCCEEECCCCEESSS
T ss_pred CccCcEEEEecccccCCCCCcCCCCcccCCCccccccccCcCHHHHHHhcCHHHHHhcCCCEEEeCCcccCCcccccccC
Confidence 3668999999987642 189999999999 999999999999999984
Q ss_pred ---CCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccccCcCCCC---CCCCcccccCC---------CC
Q 014892 72 ---FAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQ---GHGGKYNRYDG---------IP 136 (416)
Q Consensus 72 ---~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~---~~~~~~~~f~~---------~~ 136 (416)
.++|||+|.|||+|+|+|||++||++||++||++||+||||+|+||++..+. ++......+.+ ..
T Consensus 92 ~~~~~~~GYd~~dy~~idp~~Gt~~dfk~Lv~~aH~~GI~VilD~V~NHts~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 171 (686)
T 1d3c_A 92 VNNTAYHGYWARDFKKTNPAYGTIADFQNLIAAAHAKNIKVIIDFAPNHTSPASSDQPSFAENGRLYDNGTLLGGYTNDT 171 (686)
T ss_dssp CEECCTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECTTEEEECCSSCTTSTTTTCEEETTEEEECSTTCT
T ss_pred ccCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEeCcCccccccccccchhhcCccccCCcccccCCCCc
Confidence 3579999999999999999999999999999999999999999999999873 22211111100 00
Q ss_pred -CCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcHHHHHHHHHhcC-
Q 014892 137 -LSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGAR- 214 (416)
Q Consensus 137 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~~~~~~~~~~~~- 214 (416)
..|+......+.+.. ....+.+.++||||++||+||++|++++++|++ +||||||||++++++.+||+++.++++
T Consensus 172 ~~~f~~~~~~~~~~~~--~~~y~~~~~~pDLn~~np~Vr~~i~~~l~~Wl~-~GVDGfRlDa~~~i~~~f~~~~~~~v~~ 248 (686)
T 1d3c_A 172 QNLFHHNGGTDFSTTE--NGIYKNLYDLADLNHNNSTVDVYLKDAIKMWLD-LGIDGIRMNAVKHMPFGWQKSFMAAVNN 248 (686)
T ss_dssp TCCBCCSCBCCSSSHH--HHHHSBBTTEEEBCTTSHHHHHHHHHHHHHHHH-TTCCEEEETTGGGSCHHHHHHHHHHHHT
T ss_pred cCceecCCCCCcCCCc--cccccCcCCCCCcccCCHHHHHHHHHHHHHHHh-CCCCEEEEeccccCCHHHHHHHHHHHHh
Confidence 001110000010000 001233457999999999999999999999995 999999999999999999999988764
Q ss_pred --CceEEEcccCCCCCCCCCCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHhcC---chhhhhhhcCCCCCccc
Q 014892 215 --PIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKG---QFWRLRDAQGKPPGVMG 289 (416)
Q Consensus 215 --~~~~vgE~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~ 289 (416)
+.+++||.|.+.. . . ......|.+.. ..++|||++...+.+++.+ ....+.+.+......+
T Consensus 249 ~~~~~~vgE~~~~~~-----~-~-----~~~~~~~~~~~--~~~~~df~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~- 314 (686)
T 1d3c_A 249 YKPVFTFGQWFLGVN-----E-V-----SPENHKFANES--GMSLLDFRFAQKVRQVFRDNTDNMYGLKAMLEGSAADY- 314 (686)
T ss_dssp TSCCEEEECCCCCTT-----C-C-----CHHHHHHHHHS--SSEEBCHHHHHHHHHHHTTCSSCHHHHHHHHHHHHHHC-
T ss_pred cCCceEEeccccCCc-----c-c-----chhhhhhhccC--CCceeCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHhhc-
Confidence 6899999986521 0 0 02233343322 2367999999998888743 2333333221000000
Q ss_pred cccCcceecccCCCCCCCCCCCCCChhhHHHHHHHHhcCCCeeEEecCCcCCCc-----------------hhHHHHHHH
Q 014892 290 WWPSRAVTFLDNHDTGSTQAHWPFPSNHIMEGYAYILMHPGIPSVFYDHFYDWG-----------------DSIHNQIVK 352 (416)
Q Consensus 290 ~~p~~~~~fl~nHD~~R~~~~~~~~~~~~~~a~a~llt~pGiP~Iy~G~E~gw~-----------------~~l~~~~~~ 352 (416)
..+...++|++|||++|+.+ +..+.+++++|++++|++||+|+||||+|+|.. .+++++||+
T Consensus 315 ~~~~~~~~fl~nHD~~R~~~-~~~~~~~~~~a~a~llt~pG~P~IyyG~E~g~~~~~dp~~R~~~~~~~~~~~~~~~~~~ 393 (686)
T 1d3c_A 315 AQVDDQVTFIDNHDMERFHA-SNANRRKLEQALAFTLTSRGVPAIYYGTEQYMSGGTDPDNRARIPSFSTSTTAYQVIQK 393 (686)
T ss_dssp TTGGGCEECSCCTTSCCSSC-TTSCHHHHHHHHHHHHTSSSEEEEETTGGGTCCCCSTTGGGCCCCCCCSCSHHHHHHHH
T ss_pred cccccceeeccCCCcccccc-ccCCHHHHHHHHHHHHhCCCCcEEEecceecccCCCCcccccCCCCcCCCcHHHHHHHH
Confidence 12346789999999999988 444567899999999999999999999998632 368999999
Q ss_pred HHHHHHhCcccCCCCeEEEEecCCEEEEEE---CCEEEEEEcCCC
Q 014892 353 LMDVRRQQDIHSRSSIKILEAQSNLYSAII---GDKVCMKIGDGS 394 (416)
Q Consensus 353 Li~lR~~~~~l~~G~~~~~~~~~~~~~~~R---~~~~lvvinn~~ 394 (416)
|++|||++|+|+.|+++.+..++++++|.| +++++|++|++.
T Consensus 394 Li~lRk~~~al~~G~~~~~~~~~~v~af~R~~~~~~~lVv~N~s~ 438 (686)
T 1d3c_A 394 LAPLRKCNPAIAYGSTQERWINNDVLIYERKFGSNVAVVAVNRNL 438 (686)
T ss_dssp HTTHHHHCHHHHHCEEEEEEECSSEEEEEEECSSEEEEEEEECCT
T ss_pred HHHHHhhChHhhCCcEEEEeeCCCEEEEEEEcCCcEEEEEEECCC
Confidence 999999999999999999888889999998 567888899864
|
| >1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-63 Score=515.34 Aligned_cols=369 Identities=17% Similarity=0.237 Sum_probs=265.6
Q ss_pred eeccCceeEEEeeecCCCC-----CCcHHHHHhhhhhHHHcCCCEEEeCCCCCCCC-CCCcccccCCCCCCCCCCHHHHH
Q 014892 23 VIRNGREILFQGFNWESCK-----HDWWRNLERKVPDISKSGFTSVWLPPATHSFA-PEGYLPQNLYSLNSSYGSEHLLK 96 (416)
Q Consensus 23 ~~~~~~~~~~q~f~~~~~~-----~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~-~~GY~~~d~~~id~~~Gt~~d~~ 96 (416)
.++. +.||||+|.+.++. .|||+||+++|||||+||||+|||+||++++. +|||+|.||++|+|+|||++||+
T Consensus 4 ~w~~-~~viYqi~~~~F~d~~~dg~Gdl~gi~~~ldyl~~LGv~~I~l~Pi~~~~~~~~GYd~~dy~~id~~~Gt~~df~ 82 (558)
T 1uok_A 4 QWWK-ESVVYQIYPRSFMDSNGDGIGDLRGIISKLDYLKELGIDVIWLSPVYESPNDDNGYDISDYCKIMNEFGTMEDWD 82 (558)
T ss_dssp CHHH-HCCEEEECGGGTCCSSSSSSCCHHHHHTTHHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECGGGCCHHHHH
T ss_pred hhhh-cCeEEEEecHHhcCCCCCCcCCHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCCCcccccccCcccCCHHHHH
Confidence 3444 58999999988764 38999999999999999999999999999986 69999999999999999999999
Q ss_pred HHHHHHHHCCCEEEEEEccccCcCCCCCCC-------Ccc---cccCCC-----CCCCCCCc---eecCCCCCCCCCCCC
Q 014892 97 ALLHKMKQHKVRAMADIVINHRVGTTQGHG-------GKY---NRYDGI-----PLSWDEHA---VTSCTGGLGNGSTGD 158 (416)
Q Consensus 97 ~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~-------~~~---~~f~~~-----~~~~~~~~---~~~~~~~~~~~~~~~ 158 (416)
+||++||++||+||||+|+||+|..|+|+. +.| +.|.+. +.+|.... .+.+...........
T Consensus 83 ~lv~~~h~~Gi~VilD~V~NH~s~~~~wf~~~~~~~~~~y~d~y~~~~~~~g~~p~~~~~~f~~~~w~~~~~~~~~y~~~ 162 (558)
T 1uok_A 83 ELLHEMHERNMKLMMDLVVNHTSDEHNWFIESRKSKDNKYRDYYIWRPGKEGKEPNNWGAAFSGSAWQYDEMTDEYYLHL 162 (558)
T ss_dssp HHHHHHHHTTCEEEEEECCSBCCTTSHHHHHHTTCTTCTTGGGBCEECCSSSSCSSCBBCTTSSBSEEEETTTTEEEECS
T ss_pred HHHHHHHHCCCEEEEEEecccccccchHHHHHhcCCCCCcccceEeccCcCCCCCccccccCCCccccccCCcCcEEeec
Confidence 999999999999999999999999998642 222 111110 11111100 000000000111122
Q ss_pred CCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcH----------------------------HHHHHHH
Q 014892 159 NFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSA----------------------------KYVKEYI 210 (416)
Q Consensus 159 ~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~----------------------------~~~~~~~ 210 (416)
+...+||||++||+||++|++++++|+ ++||||||+|+|++++. +||++++
T Consensus 163 f~~~~pdLn~~np~Vr~~i~~~~~~W~-~~gvDGfRlDa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 241 (558)
T 1uok_A 163 FSKKQPDLNWDNEKVRQDVYEMMKFWL-EKGIDGFRMDVINFISKEEGLPTVETEEEGYVSGHKHFMNGPNIHKYLHEMN 241 (558)
T ss_dssp SCTTSCBBCTTSHHHHHHHHHHHHHHH-HTTCCEEEETTGGGSCCCTTCCCCCCCCSSCBCCGGGTTTCTTHHHHHHHHH
T ss_pred cccccccccCCCHHHHHHHHHHHHHHH-HcCCCEEEEccccccccccccCCCCCcccccccccccccCChHHHHHHHHHH
Confidence 236789999999999999999999999 69999999999987764 5888888
Q ss_pred HhcC---CceEEEcccCCCCCCCCCCCCccchhhHhHhhhhcc-CCCcccccCchhhHHHHHH-----hc-Cc--hhhhh
Q 014892 211 EGAR---PIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDG-TGQLSAAFDFTTKGILQEA-----VK-GQ--FWRLR 278 (416)
Q Consensus 211 ~~~~---~~~~vgE~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~fdf~~~~~l~~~-----~~-~~--~~~~~ 278 (416)
++++ +.+++||+|... ...+..|+.. .++++++|+|.+... .. +. +. ...+.
T Consensus 242 ~~~~~~~~~~~vgE~~~~~--------------~~~~~~y~~~~~~~~~~~~~f~~~~~--~~~~~~~~~~~~~~~~~l~ 305 (558)
T 1uok_A 242 EEVLSHYDIMTVGEMPGVT--------------TEEAKLYTGEERKELQMVFQFEHMDL--DSGEGGKWDVKPCSLLTLK 305 (558)
T ss_dssp HHTGGGSCCEEEEECTTCC--------------HHHHHHHHCGGGCSCSCEECCGGGST--TEETTEEEEECCCCHHHHH
T ss_pred HHhhccCCeEEEEeccCCC--------------HHHHHHHhccCCCccceEEehhhhhc--ccccccccccCCCCHHHHH
Confidence 7553 478999999642 2455667653 245778888875411 00 00 10 11221
Q ss_pred hhcCCCCCccccccCcceecccCCCCCCCCCCCCCCh----hhHHHHHHHHhcCCCeeEEecCCcCCCc-----------
Q 014892 279 DAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFPS----NHIMEGYAYILMHPGIPSVFYDHFYDWG----------- 343 (416)
Q Consensus 279 ~~~~~~~~~~~~~p~~~~~fl~nHD~~R~~~~~~~~~----~~~~~a~a~llt~pGiP~Iy~G~E~gw~----------- 343 (416)
..+......+ ..+...++|++|||++|+.+.++... +++++|++++||+||+|+||||+|+|..
T Consensus 306 ~~l~~~~~~~-~~~~~~~~fl~NHD~~R~~~~~g~~~~~~~~~~k~~~~~llt~pG~P~iy~G~E~G~~~~~~~~~~~~~ 384 (558)
T 1uok_A 306 ENLTKWQKAL-EHTGWNSLYWNNHDQPRVVSRFGNDGMYRIESAKMLATVLHMMKGTPYIYQGEEIGMTNVRFESIDEYR 384 (558)
T ss_dssp HHHHHHHHHT-SSSSCCEECSCCTTSCCHHHHTSCSSTTHHHHHHHHHHHHHTSSSEEEEETTGGGTCCCCCCSSGGGCC
T ss_pred HHHHHHHHhc-ccCCccceeecCCCccchhhhcCCchhhhHHHHHHHHHHHHhCCCceEEEechhcCccCCCCCCHHhhc
Confidence 1111000000 01234578999999999877665332 2589999999999999999999997521
Q ss_pred -------------------------------------------------------------------------hhHHHHH
Q 014892 344 -------------------------------------------------------------------------DSIHNQI 350 (416)
Q Consensus 344 -------------------------------------------------------------------------~~l~~~~ 350 (416)
.+++++|
T Consensus 385 d~~~~~~~~~~~~~~g~~~~~~~~~~~~~sRd~~R~pm~W~~~~~agFs~~~pwl~~~~~~~~~nv~~q~~~~~s~~~~y 464 (558)
T 1uok_A 385 DIETLNMYKEKVMERGEDIEKVMQSIYIKGRDNARTPMQWDDQNHAGFTTGEPWITVNPNYKEINVKQAIQNKDSIFYYY 464 (558)
T ss_dssp CHHHHHHHHHHHHTSCCCHHHHHHHHHHHCGGGGTSCCCCCSSTTTTSCSSCCSSCCCGGGGTSSHHHHHHCTTSHHHHH
T ss_pred ChhhhcchhhhhhhcCCcHHHhhhhhccccCCCCcCCccCCCcCCCCCcCCCCCCcCCccccccCHHHHhhccccHHHHH
Confidence 2588999
Q ss_pred HHHHHHHHhCcccCCCCeEEEE-ecCCEEEEEE---CCEEEEEEcCCCCC-----CCC-C--CcEEeeeCCc
Q 014892 351 VKLMDVRRQQDIHSRSSIKILE-AQSNLYSAII---GDKVCMKIGDGSWC-----PAG-K--EWTLATSGHK 410 (416)
Q Consensus 351 ~~Li~lR~~~~~l~~G~~~~~~-~~~~~~~~~R---~~~~lvvinn~~~~-----~~~-~--~~~~~ls~~~ 410 (416)
|+||+|||++|+|+.|+++.+. .++++++|.| +++++||+|.++.. |.. + .|++++++..
T Consensus 465 ~~Li~lRk~~~~l~~G~~~~~~~~~~~v~a~~R~~~~~~~lvv~N~s~~~~~~~l~~~~~~~~~~~ll~~~~ 536 (558)
T 1uok_A 465 KKLIELRKNNEIVVYGSYDLILENNPSIFAYVRTYGVEKLLVIANFTAEECIFELPEDISYSEVELLIHNYD 536 (558)
T ss_dssp HHHHHHHHHCHHHHHCEEEEESTTCSSEEEEEEEETTEEEEEEEECSSSCEEEECCTTCCCSCEEEEEESSC
T ss_pred HHHHHHHccCccccccceEEeecCCCCEEEEEEEeCCcEEEEEEECCCCCEEEecccccccccceEEecCCC
Confidence 9999999999999999999875 3567999998 56788899987643 221 1 2677777653
|
| >1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-64 Score=531.87 Aligned_cols=352 Identities=15% Similarity=0.270 Sum_probs=263.9
Q ss_pred CceeEEEeeecCCCC--------------------------CCcHHHHHhhhhhHHHcCCCEEEeCCCCCC---------
Q 014892 27 GREILFQGFNWESCK--------------------------HDWWRNLERKVPDISKSGFTSVWLPPATHS--------- 71 (416)
Q Consensus 27 ~~~~~~q~f~~~~~~--------------------------~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~--------- 71 (416)
.++||||+|.+.+.. .|||+||+++|||||+||||+|||+||+++
T Consensus 7 ~~~viYqI~p~~F~d~d~~n~~~~~~~~~~d~~~~~~~~~~gGdl~gi~~kLdyLk~LGv~aIwL~Pi~~~~~~~~~~g~ 86 (686)
T 1qho_A 7 KGDVIYQIIIDRFYDGDTTNNNPAKSYGLYDPTKSKWKMYWGGDLEGVRQKLPYLKQLGVTTIWLSPVLDNLDTLAGTDN 86 (686)
T ss_dssp TTCCEEEECGGGTCCSCGGGSSCGGGTTCBCTTSCSTTSBCCCCHHHHHHTHHHHHHHTCCEEEECCCEEECSSCSSTTC
T ss_pred ccCcEEEEeccccCCCCcccCcccccccccCCCccccccccCCCHHHHHHhhHHHHhcCCCEEEECccccCCcccccCCC
Confidence 458999999976631 289999999999999999999999999985
Q ss_pred CCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccccCcCCCC---CCCCcccccCC------CCCC----
Q 014892 72 FAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQ---GHGGKYNRYDG------IPLS---- 138 (416)
Q Consensus 72 ~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~---~~~~~~~~f~~------~~~~---- 138 (416)
.++|||+|.|||+|+|+|||++||++||++||++|||||||+|+||++..+. ++......+.+ .+.+
T Consensus 87 ~~~~GYd~~Dy~~idp~~Gt~~df~~Lv~~aH~~GikVilD~V~NHts~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~ 166 (686)
T 1qho_A 87 TGYHGYWTRDFKQIEEHFGNWTTFDTLVNDAHQNGIKVIVDFVPNHSTPFKANDSTFAEGGALYNNGTYMGNYFDDATKG 166 (686)
T ss_dssp CCTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECTTEEEEEBTTBTTSTTTTCEEETTEEEECSSSCTTTC
T ss_pred CCcCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEeccccccccccccccccccCccccCCcccccCCCCcccC
Confidence 4689999999999999999999999999999999999999999999999873 22211101100 0000
Q ss_pred -CCCCce-ecCCCCCCCCCCCCCC-----CCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcHHHHHHHHH
Q 014892 139 -WDEHAV-TSCTGGLGNGSTGDNF-----HGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIE 211 (416)
Q Consensus 139 -~~~~~~-~~~~~~~~~~~~~~~~-----~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~~~~~~~~~ 211 (416)
|+..+- ..+.+... ...+.+ .++||||++||+||++|++++++|++ +||||||||++++++.+||+++++
T Consensus 167 ~f~~~~~i~~w~~~~~--~~y~~~~~~~~~~~pDLn~~np~Vr~~l~~~~~~Wl~-~GVDGfRlDa~~~i~~~f~~~~~~ 243 (686)
T 1qho_A 167 YFHHNGDISNWDDRYE--AQWKNFTDPAGFSLADLSQENGTIAQYLTDAAVQLVA-HGADGLRIDAVKHFNSGFSKSLAD 243 (686)
T ss_dssp CBCCSCBCSCTTCHHH--HHHSBCEETTTEEEEEBCTTSHHHHHHHHHHHHHHHH-TTCCEEEETTGGGSCHHHHHHHHH
T ss_pred eeecCCCcCcCCCCcc--cceeecccCCcCCCCccccCCHHHHHHHHHHHHHHHh-cCCCEEEEeccccCCHHHHHHHHH
Confidence 110000 01100000 001222 45899999999999999999999995 999999999999999999999987
Q ss_pred hc---CCceEEEcccCCCCCCCCCCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHhcC---chhhhhhhcCCCC
Q 014892 212 GA---RPIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKG---QFWRLRDAQGKPP 285 (416)
Q Consensus 212 ~~---~~~~~vgE~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~~~---~~~~~~~~~~~~~ 285 (416)
++ ++.+++||.|.+.+ ... ....+..|.... ..++|||++...+.+++.+ ....+.+.+....
T Consensus 244 ~v~~~~~~~~vgE~~~~~~-----~~~----~~~~~~~~~~~~--~~~~~df~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 312 (686)
T 1qho_A 244 KLYQKKDIFLVGEWYGDDP-----GTA----NHLEKVRYANNS--GVNVLDFDLNTVIRNVFGTFTQTMYDLNNMVNQTG 312 (686)
T ss_dssp HHHHHCCCEEEECCCCCCT-----TST----THHHHHHHHHHS--SCEEBCHHHHHHHHHHHTSCSSCHHHHHHHHHHHH
T ss_pred HHHhcCCceEEeeeecCCC-----ccc----chhhhhhhcccC--CCeeeccHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 76 36899999986520 000 012344454332 2467999999998888743 2233333221000
Q ss_pred CccccccCcceecccCCCCCCCCCCCCCChhhHHHHHHHHhcCCCeeEEecCCcCCC-----------------chhHHH
Q 014892 286 GVMGWWPSRAVTFLDNHDTGSTQAHWPFPSNHIMEGYAYILMHPGIPSVFYDHFYDW-----------------GDSIHN 348 (416)
Q Consensus 286 ~~~~~~p~~~~~fl~nHD~~R~~~~~~~~~~~~~~a~a~llt~pGiP~Iy~G~E~gw-----------------~~~l~~ 348 (416)
..+ ..+...++|++|||++|+.+ +..+.+++++|++++|++||+|+||||+|+|. ..++++
T Consensus 313 ~~~-~~~~~~~~fl~NHD~~R~~s-~~~~~~~~~~a~a~llt~pG~P~IYyG~E~g~~~~~d~~~R~~~~~~~~~~~~~~ 390 (686)
T 1qho_A 313 NEY-KYKENLITFIDNHDMSRFLS-VNSNKANLHQALAFILTSRGTPSIYYGTEQYMAGGNDPYNRGMMPAFDTTTTAFK 390 (686)
T ss_dssp HHC-TTGGGCEECSCCTTSCCHHH-HCCCHHHHHHHHHHHHHSSSEEEEETTGGGTCCCCSTTTTCCCCCCCCTTSHHHH
T ss_pred Hhc-cchhhceeeccCCCCccccc-cCCCHHHHHHHHHHHHcCCCcCEEEecccccccCCCCccccccCCCCCCCcHHHH
Confidence 000 12446789999999999887 44455689999999999999999999999863 236899
Q ss_pred HHHHHHHHHHhCcccCCCCeEEEEecCCEEEEEE---CCEEEEEEcCCC
Q 014892 349 QIVKLMDVRRQQDIHSRSSIKILEAQSNLYSAII---GDKVCMKIGDGS 394 (416)
Q Consensus 349 ~~~~Li~lR~~~~~l~~G~~~~~~~~~~~~~~~R---~~~~lvvinn~~ 394 (416)
+||+|++|||++|+|+.|+++.+..++++++|.| +++++|++|++.
T Consensus 391 ~~~~Li~lRk~~~al~~G~~~~~~~~~~v~af~R~~~~~~~lV~~N~~~ 439 (686)
T 1qho_A 391 EVSTLAGLRRNNAAIQYGTTTQRWINNDVYIYERKFFNDVVLVAINRNT 439 (686)
T ss_dssp HHHHHHHHHHHCHHHHHCEEEEEEECSSEEEEEEEETTEEEEEEEECCT
T ss_pred HHHHHHHHHhhCHHhhcCceEEEeeCCCEEEEEEECCCcEEEEEEECCC
Confidence 9999999999999999999999988889999998 567888899864
|
| >3k8k_A Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, beta-sandwich, membrane protein; 2.20A {Bacteroides thetaiotaomicron} PDB: 3k8m_A* 3k8l_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-63 Score=523.63 Aligned_cols=348 Identities=15% Similarity=0.219 Sum_probs=263.5
Q ss_pred ceeEEEeeecCCCC-----CCcHHHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCHHHHHHHHHHH
Q 014892 28 REILFQGFNWESCK-----HDWWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKM 102 (416)
Q Consensus 28 ~~~~~q~f~~~~~~-----~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~a 102 (416)
+.+|||++.+.+.. .|||+||+++||||++|||++|||+||++++++|||+|.||++|+|+|||++||++||++|
T Consensus 37 ~~viY~i~~~~f~~~~~~~~G~~~g~~~~l~yl~~lGv~~i~l~Pi~~~~~~~gY~~~dy~~i~~~~Gt~~d~~~lv~~~ 116 (669)
T 3k8k_A 37 ADISYQLLLYSFADSDGDGYGDLNGVTQKLDYLNQLGVKALWLSPIHPCMSYHGYDVTDYTKVNPQLGTESDFDRLVTEA 116 (669)
T ss_dssp SCCEEEECTTTSCCSSSSSSCCHHHHHTTHHHHHTTTCSEEEECCCSSBSSTTCCSBSCTTSCCTTTCCHHHHHHHHHHH
T ss_pred CcEEEEEEhHHhcCCCCCCCcCHHHHHHHHHHHHHcCCCEEEecccccCCCCCCCCcccccccccccCCHHHHHHHHHHH
Confidence 48999999998864 3899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHCCCEEEEEEccccCcCCCCCCC-------Ccc---cccC-C---------------------CCCC------------
Q 014892 103 KQHKVRAMADIVINHRVGTTQGHG-------GKY---NRYD-G---------------------IPLS------------ 138 (416)
Q Consensus 103 H~~Gi~VilD~V~NH~~~~~~~~~-------~~~---~~f~-~---------------------~~~~------------ 138 (416)
|++||+||||+|+||++.+|+|+. +.| +.+. . .+.+
T Consensus 117 h~~gi~vi~D~V~NH~~~~~~wf~~~~~~~~~~y~d~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~f~g~~~~~ 196 (669)
T 3k8k_A 117 HNRGIKIYLDYVMNHTGTAHPWFTEASSSSESPYRNYYSFSEDPKTDIAAGKIAMITQEGAAGYNAAEWFQVSDETAAVK 196 (669)
T ss_dssp HHTTCEEEEEECCSEEETTSHHHHHHHHCTTSTTGGGBCEESCHHHHHHTTCSTTSCSSGGGGCCGGGEEESCSCCCCEE
T ss_pred HHcCCEEEEEECcccCCCcCHHHHHHhhCCCCCccceeEECCCCcccccccccccccccccccCCCcccccccCCCcccc
Confidence 999999999999999999998642 222 1121 0 0000
Q ss_pred --------CCCCc--------------------------------eecC-------------------------------
Q 014892 139 --------WDEHA--------------------------------VTSC------------------------------- 147 (416)
Q Consensus 139 --------~~~~~--------------------------------~~~~------------------------------- 147 (416)
|.... ++..
T Consensus 197 ~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (669)
T 3k8k_A 197 GLLKFTLDWSNAPSPILVVSTGTKADEDNPDTGTDNAKYLYYGEDICKKFYDKGNNIYELTVDFESTWGLLIRTSNASFW 276 (669)
T ss_dssp EEEEEEEECTTTTSCEEEEEECSSCCCCCCCCCCTTCCEEEETTTEEEECEEEETTEEEEEEEEEESSCEEEESCCSSSC
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 22100 0000
Q ss_pred CC----------------------------------CCCCCCCCCCCCC-CCcCCCC-------CHHHHHHHHHHHHHHH
Q 014892 148 TG----------------------------------GLGNGSTGDNFHG-VPNIDHT-------QHFVRKDIIAWLRWLR 185 (416)
Q Consensus 148 ~~----------------------------------~~~~~~~~~~~~~-~~dln~~-------~~~v~~~l~~~~~~w~ 185 (416)
.+ .........+... +||||++ ||+| ++|++++++|+
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~F~~~~qPDLN~~~~~~~~~Np~V-~~l~dvl~~Wl 355 (669)
T 3k8k_A 277 PSGTKYGASSSSEKLALNKDFKLTNAGNPANIMFDSQQITYFHSHFCTDWFADLNYGPVDQAGESPAY-QAIADAAKGWI 355 (669)
T ss_dssp CTTCEEBBSSTTCCBCTTSCEECBCSSSCBCBCBTTCCCCEEECTTSCTTEEEBCCCSGGGGGGCHHH-HHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccceeeeccccccCCccCCCCCccCCCCHHH-HHHHHHHHHHH
Confidence 00 0000011222345 8999999 9999 99999999999
Q ss_pred HhcCCCeEEecccCCC--------cHHHHHHHHHhcC---------C-ceEEEcccCCCCCCCCCCCCccchhhHhHhhh
Q 014892 186 NTVGFQDFRFDFARGY--------SAKYVKEYIEGAR---------P-IFSVGEYWDSCNYNSHGLDYNQDSHRQRIINW 247 (416)
Q Consensus 186 ~~~gvDGfRlD~a~~~--------~~~~~~~~~~~~~---------~-~~~vgE~~~~~~~~~~~~~~~~~~~~~~l~~~ 247 (416)
+.||||||||+|+++ +.+||+++++.++ | .++|||+|.. ...+..|
T Consensus 356 -~~GVDGFRlDaa~~i~k~~~~~~~~~f~~e~~~~v~~~~~~~g~~pd~~lvGEv~~~---------------~~~~~~y 419 (669)
T 3k8k_A 356 -ARGVDGLRLDAVKHIYHSETSEENPRFLKMFYEDMNAYYKQKGHTDDFYMIGEVLSE---------------YDKVAPY 419 (669)
T ss_dssp -TTTCCEEEETTGGGSSSCSSSSHHHHHHHHHHHHHHHHHHHTTCCSCCEEEECCCSC---------------HHHHGGG
T ss_pred -HCCCCEEEEechhhhhhccCCCccHHHHHHHHHHHHHHhhhcccCCCeEEEeccCCC---------------HHHHHHH
Confidence 559999999999999 7899999877543 3 6899999974 2444455
Q ss_pred hccCCCcccccCchhhHHHHHHhc-CchhhhhhhcCCCCCcccc-ccC-cceecccCCCCCCCCCCCCCChhhHHHHHHH
Q 014892 248 IDGTGQLSAAFDFTTKGILQEAVK-GQFWRLRDAQGKPPGVMGW-WPS-RAVTFLDNHDTGSTQAHWPFPSNHIMEGYAY 324 (416)
Q Consensus 248 ~~~~~~~~~~fdf~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~-~p~-~~~~fl~nHD~~R~~~~~~~~~~~~~~a~a~ 324 (416)
.. +++++|+|++...+..++. +....+...+......+.. .+. ..++|++|||++|+.+.++.+.+++++|+++
T Consensus 420 ~~---~l~~vfnF~~~~~l~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~Fl~NHD~~R~~s~~g~d~~~~kla~al 496 (669)
T 3k8k_A 420 YK---GLPALFEFSFWYRLEWGINNSTGCYFAKDILSYQQKYANYRSDYIEATKLSNHDEDRTSSKLGKSADKCKLAAAV 496 (669)
T ss_dssp GG---TCSEEECHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHTTCTTCEEECCSCCTTSCCHHHHTTTCHHHHHHHHHH
T ss_pred hc---cCCceeccHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhhcccceeeeeccCCCCCccccccCCCHHHHHHHHHH
Confidence 52 5889999999888877763 2221111111000000100 011 2679999999999998887677889999999
Q ss_pred HhcCCCeeEEecCCcCC-----------------Cc-----------------------------hhHHHHHHHHHHHHH
Q 014892 325 ILMHPGIPSVFYDHFYD-----------------WG-----------------------------DSIHNQIVKLMDVRR 358 (416)
Q Consensus 325 llt~pGiP~Iy~G~E~g-----------------w~-----------------------------~~l~~~~~~Li~lR~ 358 (416)
+||+||+|+||||||+| |+ .+++++||+||+|||
T Consensus 497 lltlpG~P~IYyGdEiGm~~~~~~~d~~~Rtpm~W~~~~~~w~~~~~n~~~~~~~~nv~~q~~d~~sll~~yr~Li~LRk 576 (669)
T 3k8k_A 497 LLTSAGHPYIYYGEELGLYGTKDNGDEYVRSPMLWGDSYTTNYTDKTDATVSKNVKTVADQQADTHSLLNIYFSLTRLRN 576 (669)
T ss_dssp HHTSSSCCEEETTTTTTCCCCSTTCGGGGSCCCCCSSTTCCCCCSCCCTTHHHHSCCHHHHHTCTTCHHHHHHHHHHHHH
T ss_pred HHhCCCccEEEecccccccCCCCCCCccccCCccCCCCCCCCCCcccccccccccccHHHhhcCcHHHHHHHHHHHHHHH
Confidence 99999999999999975 42 258999999999999
Q ss_pred hCcccCCCCeEE---EEe-c----CCEEEEEE---CCEEEEEEcCCCC
Q 014892 359 QQDIHSRSSIKI---LEA-Q----SNLYSAII---GDKVCMKIGDGSW 395 (416)
Q Consensus 359 ~~~~l~~G~~~~---~~~-~----~~~~~~~R---~~~~lvvinn~~~ 395 (416)
++|+|+.|+++. +.. + ++++||.| +++++||+|.+..
T Consensus 577 ~~paL~~G~~~~~~~~~~~~~~~~~~v~ay~R~~~~e~~lVv~N~s~~ 624 (669)
T 3k8k_A 577 TYPALAEGNMTKHSVYNESQEKDYKPIAAWYMTKDNEKLLVIHNFGGT 624 (669)
T ss_dssp HCHHHHHCEEEECSSSSGGGTTTCTTEEEEEEEETTEEEEEEEECSSS
T ss_pred hChhhcCCceEEeeeeeccCccCcCCEEEEEEEeCCCEEEEEEeCCCC
Confidence 999999999983 333 3 57999998 5678889998754
|
| >1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-63 Score=512.94 Aligned_cols=367 Identities=18% Similarity=0.239 Sum_probs=261.1
Q ss_pred CceeEEEeeecCCCC-----CCcHHHHHhhhhhHHHcCCCEEEeCCCCCCCC-CCCcccccCCCCCCCCCCHHHHHHHHH
Q 014892 27 GREILFQGFNWESCK-----HDWWRNLERKVPDISKSGFTSVWLPPATHSFA-PEGYLPQNLYSLNSSYGSEHLLKALLH 100 (416)
Q Consensus 27 ~~~~~~q~f~~~~~~-----~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~-~~GY~~~d~~~id~~~Gt~~d~~~Lv~ 100 (416)
.+.||||+|.+.++. .|||+||+++|||||+||||+||||||++++. +|||+|+||++|+|+|||++||++||+
T Consensus 8 ~~~viYqi~~~~F~~~~~dg~Gdl~gi~~~Ldyl~~LGv~~I~L~Pi~~~~~~~~GYd~~dy~~idp~~Gt~~df~~Lv~ 87 (557)
T 1zja_A 8 KSAVFYQVYPRSFKDTNGDGIGDFKGLTEKLDYLKGLGIDAIWINPHYASPNTDNGYDISDYREVMKEYGTMEDFDRLMA 87 (557)
T ss_dssp HHCCEEEECGGGTCCSSSSSSCCHHHHHHTHHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECTTTCCHHHHHHHHH
T ss_pred hcCcEEEEEchHhcCCCCCCccCHHHHHHHHHHHHHcCCCEEEECCCccCCCCCCCCCcccccccCcccCCHHHHHHHHH
Confidence 358999999988764 38999999999999999999999999999986 699999999999999999999999999
Q ss_pred HHHHCCCEEEEEEccccCcCCCCCCC-------Ccc---cccCC-----CCCCCCCCc---eecCCCCCCCCCCCCCCCC
Q 014892 101 KMKQHKVRAMADIVINHRVGTTQGHG-------GKY---NRYDG-----IPLSWDEHA---VTSCTGGLGNGSTGDNFHG 162 (416)
Q Consensus 101 ~aH~~Gi~VilD~V~NH~~~~~~~~~-------~~~---~~f~~-----~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 162 (416)
+||++||+||||+|+||++.+|+|+. +.| +.|.+ .+.+|.... .+.+...........+...
T Consensus 88 ~aH~~Gi~VilD~V~NHts~~~~wf~~~~~~~~~~y~d~y~~~~~~~g~~p~~~~~~f~~~~w~~~~~~~~~y~~~f~~~ 167 (557)
T 1zja_A 88 ELKKRGMRLMVDVVINHSSDQHEWFKSSRASKDNPYRDYYFWRDGKDGHEPNNYPSFFGGSAWEKDPVTGQYYLHYFGRQ 167 (557)
T ss_dssp HHHHTTCEEEEEECCSBCCTTSHHHHHHTTCTTCTTGGGBCEECCBTTBCSSCCBCTTSSBSEEEETTTTEEEECSSCTT
T ss_pred HHHHCCCEEEEEEeccccccchhHHHHhhcCCCCCCccceEecCCcCCCCCccccccCCCccccccCCcCcEEEeccccc
Confidence 99999999999999999999998642 122 11111 011111100 0000000000111222367
Q ss_pred CCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcH--------------------------HHHHHHHHhcC--
Q 014892 163 VPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSA--------------------------KYVKEYIEGAR-- 214 (416)
Q Consensus 163 ~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~--------------------------~~~~~~~~~~~-- 214 (416)
+||||++||+||++|++++++|+ ++||||||||+|++++. +||++++++++
T Consensus 168 ~pdLN~~np~Vr~~l~~~~~~Wl-~~gvDGfRlDa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~~~ 246 (557)
T 1zja_A 168 QPDLNWDTPKLREELYAMLRFWL-DKGVSGMRFDTVATYSKTPGFPDLTPEQMKNFAEAYTQGPNLHRYLQEMHEKVFDH 246 (557)
T ss_dssp SCBBCTTCHHHHHHHHHHHHHHH-TTTCCEEEETTGGGSSCCTTCCCCCHHHHHTHHHHTTCCTTHHHHHHHHHHHTGGG
T ss_pred CCccCCCCHHHHHHHHHHHHHHH-HcCCCEEeecchhhcccccccCcCCCcccccccccccCChHHHHHHHHHHHHHhcc
Confidence 89999999999999999999999 69999999999987753 58888887553
Q ss_pred -CceEEEcccCCCCCCCCCCCCccchhhHhHhhhhcc-CCCcccccCchhhHHHH--HHhc-Cc--hhhhhhhcCCCCCc
Q 014892 215 -PIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDG-TGQLSAAFDFTTKGILQ--EAVK-GQ--FWRLRDAQGKPPGV 287 (416)
Q Consensus 215 -~~~~vgE~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~fdf~~~~~l~--~~~~-~~--~~~~~~~~~~~~~~ 287 (416)
+.+++||+|... ...+..|... .++++++|+|.+...-. ..+. +. ...+...+......
T Consensus 247 ~~~~~igE~~~~~--------------~~~~~~y~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 312 (557)
T 1zja_A 247 YDAVTAGEIFGAP--------------LNQVPLFIDSRRKELDMAFTFDLIRYDRALDRWHTIPRTLADFRQTIDKVDAI 312 (557)
T ss_dssp SCCEEEEECCSCC--------------GGGHHHHHCGGGCSCSEEECCTTTTTTBCTTSSCBCCCCHHHHHHHHHHHHHH
T ss_pred CCeEEEEeccCCC--------------HHHHHHHhccCCCcccEEEehhhhhhcccccccccCCCCHHHHHHHHHHHHHh
Confidence 478999999542 2445566653 24577788886531100 0000 10 11121111000000
Q ss_pred cccccCcceecccCCCCCCCCCCCCCCh-----hhHHHHHHHHhcCCCeeEEecCCcCCCc-------------------
Q 014892 288 MGWWPSRAVTFLDNHDTGSTQAHWPFPS-----NHIMEGYAYILMHPGIPSVFYDHFYDWG------------------- 343 (416)
Q Consensus 288 ~~~~p~~~~~fl~nHD~~R~~~~~~~~~-----~~~~~a~a~llt~pGiP~Iy~G~E~gw~------------------- 343 (416)
+ ..+...++|++|||++|+.+.++.+. +++++|++++||+||+|+||||+|+|..
T Consensus 313 ~-~~~~~~~~fl~nHD~~R~~~~~~~~~~~~~~~~~k~~~~~llt~pG~P~iy~G~E~G~~~~~~~~~~~~~d~~~~~~~ 391 (557)
T 1zja_A 313 A-GEYGWNTFFLGNHDNPRAVSHFGDDRPQWREASAKALATVTLTQRGTPFIFQGDELGMTNYPFKTLQDFDDIEVKGFF 391 (557)
T ss_dssp H-TTTCCBEECSCCTTSCCHHHHHSCCSTTTHHHHHHHHHHHHHTSSSEEEEETTGGGTCCCCCCCSGGGCCCHHHHHHH
T ss_pred c-ccCCccceeccCCCCcchhhhhCCCchhhHHHHHHHHHHHHHhCCCceEEEecccccccCCCcCCHHHccCHHHhhhH
Confidence 0 01234578999999999876654322 2589999999999999999999997521
Q ss_pred -----------------------------------------------------------------hhHHHHHHHHHHHHH
Q 014892 344 -----------------------------------------------------------------DSIHNQIVKLMDVRR 358 (416)
Q Consensus 344 -----------------------------------------------------------------~~l~~~~~~Li~lR~ 358 (416)
.+++++||+||+|||
T Consensus 392 ~~~~~~g~~~~~~~~~~~~~~~rd~~R~pm~W~~~~~~gFs~~~pwl~~~~~~~~~nv~~q~~~~~s~~~~~~~Li~lRk 471 (557)
T 1zja_A 392 QDYVETGKATAEELLTNVALTSRDNARTPFQWDDSANAGFTTGKPWLKVNPNYTEINAAREIGDPKSVYSFYRNLISIRH 471 (557)
T ss_dssp HHHTTTTSSCHHHHHHHHHHHCGGGGCSCCCCSSSGGGGSCSSCCSSCCCGGGGTSCHHHHHTCTTSHHHHHHHHHHHHH
T ss_pred HHHhhcCCccHHHHHhhhccccCCCCcCCccCCCCCCCCCCCCCCCCcCCccccccCHHHHhcccchHHHHHHHHHHHHc
Confidence 258899999999999
Q ss_pred hCcccCCCCeEEEE-ecCCEEEEEE---CCEEEEEEcCCCCC-----CCCCC-cEEeeeCC
Q 014892 359 QQDIHSRSSIKILE-AQSNLYSAII---GDKVCMKIGDGSWC-----PAGKE-WTLATSGH 409 (416)
Q Consensus 359 ~~~~l~~G~~~~~~-~~~~~~~~~R---~~~~lvvinn~~~~-----~~~~~-~~~~ls~~ 409 (416)
++|+|+.|+++.+. .++++++|.| +++++||+|.+... |..+. |++++++.
T Consensus 472 ~~~~l~~g~~~~~~~~~~~v~a~~R~~~~~~~lvv~N~s~~~~~~~l~~~~~~~~~l~~~~ 532 (557)
T 1zja_A 472 ETPALSTGSYRDIDPSNADVYAYTRSQDGETYLVVVNFKAEPRSFTLPDGMHIAETLIESS 532 (557)
T ss_dssp HCTHHHHSEEEESCTTCSSEEEEEEEETTEEEEEEEECSSSCEEEECCTTCCEEEEEEEES
T ss_pred cCchhhcceEEEeecCCCcEEEEEEEcCCceEEEEEECCCCCEEEeccCCCccceEEEecC
Confidence 99999999998864 3567999998 45788889987643 22223 36666544
|
| >1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-63 Score=518.72 Aligned_cols=348 Identities=19% Similarity=0.258 Sum_probs=258.4
Q ss_pred CcHHHHHhhhhhHHH-cCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCC--C--EEEEEEcccc
Q 014892 43 DWWRNLERKVPDISK-SGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHK--V--RAMADIVINH 117 (416)
Q Consensus 43 G~~~gi~~~LdyLk~-LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~G--i--~VilD~V~NH 117 (416)
|||+||+++|||||+ ||||+||||||++++++|||+|+|||+|+|+|||++|||+||++||++| | +||||+|+||
T Consensus 188 G~~~gi~~~LdyLk~~LGvt~I~L~Pi~~~~~~~GYd~~dy~~id~~~Gt~~dfk~LV~~~H~~G~~I~~~VIlD~V~NH 267 (637)
T 1ji1_A 188 GDLAGIDQKLGYIKKTLGANILYLNPIFKAPTNHKYDTQDYMAVDPAFGDNSTLQTLINDIHSTANGPKGYLILDGVFNH 267 (637)
T ss_dssp CCHHHHHHTHHHHHTTTCCCEEEESCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHCSSSSSCCEEEEEECCSB
T ss_pred cCHHHHHHhHHHHHhccCCCEEEECCCccCCCCCCcCccchhhhccccCCHHHHHHHHHHHHhCCCCccceEEEEECccc
Confidence 899999999999999 9999999999999999999999999999999999999999999999999 9 9999999999
Q ss_pred CcCCCCCCCCcccccC------CCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCH--HHHHHH----HHHHHHHH
Q 014892 118 RVGTTQGHGGKYNRYD------GIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQH--FVRKDI----IAWLRWLR 185 (416)
Q Consensus 118 ~~~~~~~~~~~~~~f~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~--~v~~~l----~~~~~~w~ 185 (416)
++.+|+|+...-. |. +....+.+........+....+. ....+|+||++|| +||++| ++++++|+
T Consensus 268 ~~~~~~~f~~~~~-f~~~g~y~~~~~py~~~y~~~~~~~~~~~~~--g~~~~pdln~~~p~~~Vr~~i~~~~~~~~~~Wl 344 (637)
T 1ji1_A 268 TGDSHPWFDKYNN-FSSQGAYESQSSPWYNYYTFYTWPDSYASFL--GFNSLPKLNYGNSGSAVRGVIYNNSNSVAKTYL 344 (637)
T ss_dssp CCTTSTTTCTTCC-SSSCCTTTCTTCTTGGGBCEEETTTEECEET--TEEEEEBBBCCSTTCHHHHHHTTSTTSHHHHHH
T ss_pred CCCCcHHHhhhhc-cCccccccCCCCccccccccCCCCCCccccc--CCCCcccccccCChHHHHHHHHhhhHHHHHHHH
Confidence 9999987653211 11 00000000000000000000111 1245899999999 999999 99999999
Q ss_pred Hh-cCCCeEEecccCCC---c--------HHHHHHHHHhcC---C-ceEEEcccCCCCCCCCCCCCccchhhHhHhhhhc
Q 014892 186 NT-VGFQDFRFDFARGY---S--------AKYVKEYIEGAR---P-IFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWID 249 (416)
Q Consensus 186 ~~-~gvDGfRlD~a~~~---~--------~~~~~~~~~~~~---~-~~~vgE~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 249 (416)
++ +||||||||+|+++ + .+||+++++.++ | .+++||.|.... .|+.
T Consensus 345 ~~~~gvDGfR~Da~~~l~~~~~~~~~~~~~~fl~~~~~~v~~~~p~~~ligE~~~~~~------------------~~~~ 406 (637)
T 1ji1_A 345 NPPYSVDGWRLDAAQYVDANGNNGSDVTNHQIWSEFRNAVKGVNSNAAIIGEYWGNAN------------------PWTA 406 (637)
T ss_dssp STTTCCCEEEETTGGGCBSTTCCCSSHHHHHHHHHHHHHHHHHCTTCEEEECCSSCCG------------------GGTT
T ss_pred hCcCCCCEEEEEchhhhhccCccccccchHHHHHHHHHHHHhhCCCeEEEEEecCCch------------------hhhc
Confidence 77 99999999999999 5 889999988764 4 789999997521 1221
Q ss_pred cCCCcccccCc-hhhHHHHHHhcC----------chhhhhhhcCCCCCcccc-ccCcceecccCCCCCCCCCCCCCChhh
Q 014892 250 GTGQLSAAFDF-TTKGILQEAVKG----------QFWRLRDAQGKPPGVMGW-WPSRAVTFLDNHDTGSTQAHWPFPSNH 317 (416)
Q Consensus 250 ~~~~~~~~fdf-~~~~~l~~~~~~----------~~~~~~~~~~~~~~~~~~-~p~~~~~fl~nHD~~R~~~~~~~~~~~ 317 (416)
.+.++++++++ .++..+...+.+ ....+...+......+.. .+...++|++|||+.|+.+.+..+.++
T Consensus 407 ~g~~~d~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~f~~nHD~~rl~~~~~g~~~~ 486 (637)
T 1ji1_A 407 QGNQWDAATNFDGFTQPVSEWITGKDYQNNSASISTTQFDSWLRGTRANYPTNVQQSMMNFLSNHDITRFATRSGGDLWK 486 (637)
T ss_dssp TSSSCSEEBCTTTTHHHHHHHHTSBCTTSCBCCCCHHHHHHHHHHHHTTSCHHHHTTCEEESCCTTSCCHHHHTTTCHHH
T ss_pred cCCccceEEecHHHHHHHHHHhcCCccccccCCCCHHHHHHHHHHHHHhccccchhhceecccCCchhhHhhhcCCcHHH
Confidence 22346677776 455666665543 112222211100000110 123568999999999988777656778
Q ss_pred HHHHHHHHhcCCCeeEEecCCcCC--------------Cc-----hhHHHHHHHHHHHHHhCcccCCCCeEEEEecCC--
Q 014892 318 IMEGYAYILMHPGIPSVFYDHFYD--------------WG-----DSIHNQIVKLMDVRRQQDIHSRSSIKILEAQSN-- 376 (416)
Q Consensus 318 ~~~a~a~llt~pGiP~Iy~G~E~g--------------w~-----~~l~~~~~~Li~lR~~~~~l~~G~~~~~~~~~~-- 376 (416)
+++|++++||+||+|+||||+|+| |+ .++++++|+||+|||++|+|+.|.++.+..+++
T Consensus 487 ~~~a~a~ll~~pG~P~iy~GdE~G~~~~~d~~~r~~~~W~~~~~~~~l~~~~~~Li~lRk~~~al~~g~~~~~~~~~~~~ 566 (637)
T 1ji1_A 487 TYLALIFQMTYVGTPTIYYGDEYGMQGGADPDNRRSFDWSQATPSNSAVALTQKLITIRNQYPALRTGSFMTLITDDTNK 566 (637)
T ss_dssp HHHHHHHHTTSSSEEEEETTGGGTCCCCSTTGGGCCCCTTSSSTTSHHHHHHHHHHHHHHHCHHHHHSEEEEEEEETTTT
T ss_pred HHHHHHHHHhCCCCceEEeeeccccCCCCCCcccCCCCCCcCCChHHHHHHHHHHHHHHhhChHhhcCceEEEEeCCCeE
Confidence 999999999999999999999975 43 379999999999999999999999998877654
Q ss_pred EEEEEE---CCEEEEEEcCCCCC------------CCCCCcEEeeeCCce
Q 014892 377 LYSAII---GDKVCMKIGDGSWC------------PAGKEWTLATSGHKY 411 (416)
Q Consensus 377 ~~~~~R---~~~~lvvinn~~~~------------~~~~~~~~~ls~~~~ 411 (416)
+++|.| +++++||+|++... |.++.|++++++..+
T Consensus 567 v~a~~R~~~~~~~lvv~N~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~ 616 (637)
T 1ji1_A 567 IYSYGRFDNVNRIAVVLNNDSVSHTVNVPVWQLSMPNGSTVTDKITGHSY 616 (637)
T ss_dssp EEEEEEECSSCEEEEEEECSSSCEEEEECGGGGTCCTTCEEEETTTCCEE
T ss_pred EEEEEEEcCCCEEEEEEECCCCCEEEecCccccccCCCceEEEeccCceE
Confidence 599988 46899999986432 124567777766544
|
| >2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-62 Score=504.25 Aligned_cols=356 Identities=17% Similarity=0.253 Sum_probs=255.5
Q ss_pred eeccCceeEEEeeecCCCC-----CCcHHHHHhhhhhHHHcCCCEEEeCCCCCCCC-CCCcccccCCCCCCCCCCHHHHH
Q 014892 23 VIRNGREILFQGFNWESCK-----HDWWRNLERKVPDISKSGFTSVWLPPATHSFA-PEGYLPQNLYSLNSSYGSEHLLK 96 (416)
Q Consensus 23 ~~~~~~~~~~q~f~~~~~~-----~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~-~~GY~~~d~~~id~~~Gt~~d~~ 96 (416)
.++. +.||||+|.+.++. .|||+||+++|||||+||||+|||+||++++. +|||+|+||++|+|+|||++||+
T Consensus 4 ~w~~-~~viYqi~~~~F~d~~~dg~Gd~~gi~~~ldyl~~lGv~~i~l~Pi~~~~~~~~gY~~~dy~~id~~~Gt~~d~~ 82 (555)
T 2ze0_A 4 TWWK-EGVAYQIYPRSFMDANGDGIGDLRGIIEKLDYLVELGVDIVWICPIYRSPNADNGYDISDYYAIMDEFGTMDDFD 82 (555)
T ss_dssp CHHH-HCCEEEECGGGTCCSSSSSSCCHHHHHHTHHHHHHHTCCEEEECCCEECCCTTTTCSCSEEEEECGGGCCHHHHH
T ss_pred hhhh-cCcEEEEEchHhcCCCCCCcCCHHHHHHHHHHHHHcCCCEEEeCCcccCCCCCCCcCcccccccCcccCCHHHHH
Confidence 3444 58999999998764 38999999999999999999999999999986 69999999999999999999999
Q ss_pred HHHHHHHHCCCEEEEEEccccCcCCCCCCC-------Ccc---cccCCC-----CCCCCCC---ceecCCCCCCCCCCCC
Q 014892 97 ALLHKMKQHKVRAMADIVINHRVGTTQGHG-------GKY---NRYDGI-----PLSWDEH---AVTSCTGGLGNGSTGD 158 (416)
Q Consensus 97 ~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~-------~~~---~~f~~~-----~~~~~~~---~~~~~~~~~~~~~~~~ 158 (416)
+||++||++||+||||+|+||++.+|+|+. +.| +.+.+. +.+|... ..+.+..........+
T Consensus 83 ~lv~~~h~~Gi~vilD~V~NH~~~~~~~f~~~~~~~~~~~~~~y~~~~~~~g~~p~~~~~~f~~~~w~~~~~~~~~~~~~ 162 (555)
T 2ze0_A 83 ELLAQAHRRGLKVILDLVINHTSDEHPWFIESRSSRDNPKRDWYIWRDGKDGREPNNWESIFGGSAWQYDERTGQYYLHI 162 (555)
T ss_dssp HHHHHHHHTTCEEEEEEECSBCCTTSHHHHHHHHCSSSTTGGGBCEECCBTTBCSSCEECTTSSBSEEEETTTTEEEECS
T ss_pred HHHHHHHHCCCEEEEEEecccccchhhHHHHhhcCCCCCccccccccCCCCCCCCCcccccCCCccceecCCCCceeecc
Confidence 999999999999999999999999987642 222 111110 1111110 0000000001111123
Q ss_pred CCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcH-----------------------------HHHHHH
Q 014892 159 NFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSA-----------------------------KYVKEY 209 (416)
Q Consensus 159 ~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~-----------------------------~~~~~~ 209 (416)
+...+||||++||+||++|++++++|+ ++||||||||+|++++. +|++++
T Consensus 163 f~~~~pdLn~~np~V~~~l~~~~~~W~-~~gvDGfRlDa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (555)
T 2ze0_A 163 FDVKQPDLNWENSEVRQALYEMVNWWL-DKGIDGFRIDAISHIKKKPGLPDLPNPKGLKYVPSFAGHMNQPGIMEYLREL 241 (555)
T ss_dssp SCTTCCBBCTTCHHHHHHHHHHHHHHH-HHTCCEEEEESGGGSSCCTTCCCCC----CCSEECHHHHSSCTTHHHHHHHH
T ss_pred cCccCCccCCCCHHHHHHHHHHHHHHH-HcCCCEEEEccccccccccccccCCcccccccccccccccCcHHHHHHHHHH
Confidence 346899999999999999999999999 69999999999987753 578888
Q ss_pred HHhcC---CceEEEcccCCCCCCCCCCCCccchhhHhHhhhhcc-CCCcccccCchhhHHHHHH--hcCchhhhhhhcCC
Q 014892 210 IEGAR---PIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDG-TGQLSAAFDFTTKGILQEA--VKGQFWRLRDAQGK 283 (416)
Q Consensus 210 ~~~~~---~~~~vgE~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~fdf~~~~~l~~~--~~~~~~~~~~~~~~ 283 (416)
++.++ +.+++||+|... ...+..|... .++++++|+|.+....... -..+...+...+..
T Consensus 242 r~~v~~~~~~~~vgE~~~~~--------------~~~~~~y~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~~~~ 307 (555)
T 2ze0_A 242 KEQTFARYDIMTVGEANGVT--------------VDEAEQWVGEENGVFNMIFQFEHLGLWERRADGSIDVRRLKRTLTK 307 (555)
T ss_dssp HHHTGGGSSCEEEEECTTCC--------------TTTTHHHHCSSSCSCSEEECCTTCCCCCCCC--CCCHHHHHHHHHH
T ss_pred HHHhhccCCeEEEeccCCCC--------------HHHHHHHhccccccccceeehHHHhhhhccccCCCCHHHHHHHHHH
Confidence 77542 478999999642 1233455543 2457778888754110000 00011111111100
Q ss_pred CCCccccccCcceecccCCCCCCCCCCCCCCh----hhHHHHHHHHhcCCCeeEEecCCcCCCc----------------
Q 014892 284 PPGVMGWWPSRAVTFLDNHDTGSTQAHWPFPS----NHIMEGYAYILMHPGIPSVFYDHFYDWG---------------- 343 (416)
Q Consensus 284 ~~~~~~~~p~~~~~fl~nHD~~R~~~~~~~~~----~~~~~a~a~llt~pGiP~Iy~G~E~gw~---------------- 343 (416)
..... ..+...++|++|||++|+.+.++... .+.+++++++||+||+|+||||+|+|..
T Consensus 308 ~~~~~-~~~~~~~~fl~NHD~~R~~s~~g~~~~~~~~~~k~~~~~l~t~pG~P~iy~G~E~G~~~~~~~~~~~~~d~~~~ 386 (555)
T 2ze0_A 308 WQKGL-ENRGWNALFLENHDLPRSVSTWGNDRDYWAESAKALGALYFFMQGTPFIYQGQEIGMTNVRFDDIRDYRDVSAL 386 (555)
T ss_dssp HHHHH-TTTCCBEECSCCTTSCCHHHHTSCSSSSHHHHHHHHHHHHHTSSSEEEEETTGGGTCCCCCCSSGGGCCSHHHH
T ss_pred HHhhc-cCCCceeeeecCCCCcchhhhhCCchhhhHHHHHHHHHHHHhCCCceEEEeceecCcCCCCCCCHHHccCHHhh
Confidence 00000 01124568999999999877654332 2589999999999999999999997521
Q ss_pred -------------------------------------------------------------------hhHHHHHHHHHHH
Q 014892 344 -------------------------------------------------------------------DSIHNQIVKLMDV 356 (416)
Q Consensus 344 -------------------------------------------------------------------~~l~~~~~~Li~l 356 (416)
.+++++||+||+|
T Consensus 387 ~~~~~~~~~g~~~~~~~~~~~~~~rd~~R~pm~W~~~~~~gFs~~~pWl~~~~~~~~~nv~~q~~~~~s~~~~y~~Li~l 466 (555)
T 2ze0_A 387 RLYELERAKGRTHEEAMTIIWKTGRDNSRTPMQWSGASNAGFTTGTPWIKVNENYRTINVEAERRDPNSVWSFYRQMIQL 466 (555)
T ss_dssp C-----------------CHHHHCGGGGTSCCCCCSSGGGGSCSSCCSSCCCGGGGTSSHHHHHHCTTSHHHHHHHHHHH
T ss_pred cchhhhhhcCCcHHHHHhhhhcccCCCCcCCcccCCCCCCCCcCCCCCccCCCcccccCHHHHhhccccHHHHHHHHHHH
Confidence 2589999999999
Q ss_pred HHhCcccCCCCeEEEE-ecCCEEEEEE---CCEEEEEEcCCCC
Q 014892 357 RRQQDIHSRSSIKILE-AQSNLYSAII---GDKVCMKIGDGSW 395 (416)
Q Consensus 357 R~~~~~l~~G~~~~~~-~~~~~~~~~R---~~~~lvvinn~~~ 395 (416)
||++|+|+.|+++.+. .++++++|.| +++++|++|.+..
T Consensus 467 Rk~~~al~~G~~~~~~~~~~~v~a~~R~~~~~~~lvv~N~s~~ 509 (555)
T 2ze0_A 467 RKANELFVYGTYDLLLENHPSIYAYTRTLGRDRALVVVNLSDR 509 (555)
T ss_dssp HHHCTHHHHSEEEEESTTCSSEEEEEEEETTEEEEEEEECSSS
T ss_pred HcCCchhhccceEEeecCCCcEEEEEEEcCCceEEEEEECCCC
Confidence 9999999999999874 4567999998 5678888998653
|
| >3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-62 Score=506.40 Aligned_cols=352 Identities=15% Similarity=0.153 Sum_probs=256.9
Q ss_pred CceeEEEeeecCCCC-----CCcHHHHHhhhhhHHHcCCCEEEeCCCCCCCC-CCCcccccCCCCCCCCCCHHHHHHHHH
Q 014892 27 GREILFQGFNWESCK-----HDWWRNLERKVPDISKSGFTSVWLPPATHSFA-PEGYLPQNLYSLNSSYGSEHLLKALLH 100 (416)
Q Consensus 27 ~~~~~~q~f~~~~~~-----~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~-~~GY~~~d~~~id~~~Gt~~d~~~Lv~ 100 (416)
.+.||||+|.+.++. .|||+||+++|||||+||||+|||+||++++. +|||+|.||++|+|+|||++||++||+
T Consensus 16 ~~~viYqi~~~~F~d~~~dg~Gdl~gi~~~Ldyl~~LGv~~i~l~Pi~~~~~~~~GY~~~dy~~id~~~Gt~~df~~lv~ 95 (589)
T 3aj7_A 16 KEATFYQIYPASFKDSNDDGWGDMKGIASKLEYIKELGADAIWISPFYDSPQDDMGYDIANYEKVWPTYGTNEDCFALIE 95 (589)
T ss_dssp HHCCEEEECGGGSCCSSSSSSCCHHHHHHTHHHHHHHTCSEEEECCCEECCCTTTTSSCSEEEEECTTTCCHHHHHHHHH
T ss_pred hhCeEEEEEhHHhcCCCCCCccCHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCcCcccccccccccCCHHHHHHHHH
Confidence 458999999988764 38999999999999999999999999999986 689999999999999999999999999
Q ss_pred HHHHCCCEEEEEEccccCcCCCCCCC-------Cccc---ccCCC-----------CCCCCCCc---eecCCCCCCCCCC
Q 014892 101 KMKQHKVRAMADIVINHRVGTTQGHG-------GKYN---RYDGI-----------PLSWDEHA---VTSCTGGLGNGST 156 (416)
Q Consensus 101 ~aH~~Gi~VilD~V~NH~~~~~~~~~-------~~~~---~f~~~-----------~~~~~~~~---~~~~~~~~~~~~~ 156 (416)
+||++||+||||+|+||++..|+|+. +.|. .+.+. +.+|.... .+.+.....+...
T Consensus 96 ~~h~~Gi~VilD~V~NH~~~~~~wf~~~~~~~~~~y~d~y~~~~~~~~~~~g~~~~p~~~~~~f~g~~w~~~~~~~~~y~ 175 (589)
T 3aj7_A 96 KTHKLGMKFITDLVINHCSSEHEWFKESRSSKTNPKRDWFFWRPPKGYDAEGKPIPPNNWKSYFGGSAWTFDEKTQEFYL 175 (589)
T ss_dssp HHHHTTCEEEEEECCSBCCTTSHHHHHHTTCSSSTTGGGBCEECCSEECTTSCEECSSCBBCTTSSBSEEEETTTTEEEE
T ss_pred HHHHCCCEEEEEecccccccchhHHHHHhcCCCCCCCCceeecCCcccccccCCCCCCcccccCCCccceecCCCCeEEE
Confidence 99999999999999999999998642 1121 11110 01111100 0000000000111
Q ss_pred CCCCCCCCcCCCCCHHHHHHHHH-HHHHHHHhcCCCeEEecccCCCc------------------------------HHH
Q 014892 157 GDNFHGVPNIDHTQHFVRKDIIA-WLRWLRNTVGFQDFRFDFARGYS------------------------------AKY 205 (416)
Q Consensus 157 ~~~~~~~~dln~~~~~v~~~l~~-~~~~w~~~~gvDGfRlD~a~~~~------------------------------~~~ 205 (416)
..+...+||||++||+||++|++ ++++|+ ++||||||+|+|+++. .+|
T Consensus 176 ~~f~~~~pdLN~~np~Vr~~l~~~~~~~Wl-~~gvDGfRlDa~~~i~~~~~~~d~~~~~~~~~~~~~~~~~~n~~~~~~~ 254 (589)
T 3aj7_A 176 RLFCSTQPDLNWENEDCRKAIYESAVGYWL-DHGVDGFRIDVGSLYSKVVGLPDAPVVDKNSTWQSSDPYTLNGPRIHEF 254 (589)
T ss_dssp CSSSTTCCBBCTTCHHHHHHHHHHHTHHHH-HTTCCEEEETTGGGSCCCTTCCCCCCCCTTCSSBCCHHHHSSCTTHHHH
T ss_pred CccCCCCCccCCCCHHHHHHHHHHHHHHHH-hcCCCEEEEccccccccccCCCcCCccccccccccccccccccHHHHHH
Confidence 22346799999999999999999 999999 5899999999998873 368
Q ss_pred HHHHHH----hcC---CceEEEcccCCCCCCCCCCCCccchhhHhHhhhhccC-CCcccccCchhhHHHHHHhc------
Q 014892 206 VKEYIE----GAR---PIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGT-GQLSAAFDFTTKGILQEAVK------ 271 (416)
Q Consensus 206 ~~~~~~----~~~---~~~~vgE~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~fdf~~~~~l~~~~~------ 271 (416)
|+++++ .++ +.+++||+|... ...+..|.... .++.+.|+|... ......
T Consensus 255 l~~~~~~~~~~v~~~~~~~~vgE~~~~~--------------~~~~~~y~~~~~~~~~~~f~f~~~--~~~~~~~~~~~~ 318 (589)
T 3aj7_A 255 HQEMNQFIRNRVKDGREIMTVGEMQHAS--------------DETKRLYTSASRHELSELFNFSHT--DVGTSPLFRYNL 318 (589)
T ss_dssp HHHHHHHHHHHCSSCCCCEEEEEEECCC--------------HHHHHHHHCGGGCSCSEEEECHHH--HTTEETTEEEEE
T ss_pred HHHHHHHHHHHhccCCCeEEEEEeCCCC--------------HHHHHHhhccCCCccceeeehhhh--hhhccccccccc
Confidence 888887 663 378999999752 24455565432 245667776542 111110
Q ss_pred --CchhhhhhhcCCCCCccccccCcceecccCCCCCCCCCCCCCC-----hhhHHHHHHHHhcCCCeeEEecCCcCCCc-
Q 014892 272 --GQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFP-----SNHIMEGYAYILMHPGIPSVFYDHFYDWG- 343 (416)
Q Consensus 272 --~~~~~~~~~~~~~~~~~~~~p~~~~~fl~nHD~~R~~~~~~~~-----~~~~~~a~a~llt~pGiP~Iy~G~E~gw~- 343 (416)
.+...+...+......+...+...++|++|||++|+.+.++.+ ..++++|++++||+||+|+||||+|+|..
T Consensus 319 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~fl~NHD~~R~~~~~~~~~~~~~~~~~k~~~~~llt~pG~P~iy~G~E~G~~~ 398 (589)
T 3aj7_A 319 VPFELKDWKIALAELFRYINGTDCWSTIYLENHDQPRSITRFGDDSPKNRVISGKLLSVLLSALTGTLYVYQGQELGQIN 398 (589)
T ss_dssp CCCCHHHHHHHHHTTTGGGTTSSCCCEECSCCTTSCCHHHHHSCCSTTTHHHHHHHHHHHHHTSSSEEEEETTGGGTCCC
T ss_pred CCCCHHHHHHHHHHHHHhcccCCCcccccccCCCCcchHHHhCCCchhhHHHHHHHHHHHHHHCCCCcEEEcChhcccCC
Confidence 1122232222211111111233567999999999987766533 35789999999999999999999997410
Q ss_pred --------------------------------------------------------------------------------
Q 014892 344 -------------------------------------------------------------------------------- 343 (416)
Q Consensus 344 -------------------------------------------------------------------------------- 343 (416)
T Consensus 399 ~~~~~~~~~~D~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~rd~~R~pm~W~~~~~~~GFs~~~~~pwl~~~~~~~~~ 478 (589)
T 3aj7_A 399 FKNWPVEKYEDVEIRNNYNAIKEEHGENSEEMKKFLEAIALISRDHARTPMQWSREEPNAGFSGPSAKPWFYLNDSFREG 478 (589)
T ss_dssp CCSCCGGGCCCHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHCGGGGTSCCCCCSCTTTTTSSCTTCCCSSCCCGGGGGT
T ss_pred CCCCCHHHhcCHHhhhhhHHHhhcCCcccchhhhhhhhhcccCCCCCccceecCCCCCCCCCCCCCCCCCccCCcccccc
Confidence
Q ss_pred ----------hhHHHHHHHHHHHHHhCcccC-C-CCeEEEEecC-CEEEEEE---CCEEEEEEcCCCC
Q 014892 344 ----------DSIHNQIVKLMDVRRQQDIHS-R-SSIKILEAQS-NLYSAII---GDKVCMKIGDGSW 395 (416)
Q Consensus 344 ----------~~l~~~~~~Li~lR~~~~~l~-~-G~~~~~~~~~-~~~~~~R---~~~~lvvinn~~~ 395 (416)
.+++++||+||+|||++|+|+ . |+++.+..++ ++++|.| +++++||+|.+..
T Consensus 479 ~nv~~q~~d~~Sl~~~yr~Li~lRk~~~~l~~~~G~~~~~~~~~~~v~ay~R~~~~~~~lvv~N~s~~ 546 (589)
T 3aj7_A 479 INVEDEIKDPNSVLNFWKEALKFRKAHKDITVYGYDFEFIDLDNKKLFSFTKKYNNKTLFAALNFSSD 546 (589)
T ss_dssp CSHHHHHHCTTSHHHHHHHHHHHHHHTHHHHTSCEEEEEESTTCSSEEEEEEEETTEEEEEEEECSSS
T ss_pred ccHHHHhhCCCcHHHHHHHHHHHHhcChhhhccCCceEEEecCCCcEEEEEEEcCCCEEEEEEeCCCC
Confidence 028999999999999999999 8 9999988765 8999998 5678888998653
|
| >1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-60 Score=494.10 Aligned_cols=369 Identities=12% Similarity=0.145 Sum_probs=268.1
Q ss_pred eeec-cCceeEEEeeecCCCCCCcHHHHHhhhhhHHHcCCCEEEeCCCCCCC---CCCCcccccCCCCCCCCCCHHHHHH
Q 014892 22 AVIR-NGREILFQGFNWESCKHDWWRNLERKVPDISKSGFTSVWLPPATHSF---APEGYLPQNLYSLNSSYGSEHLLKA 97 (416)
Q Consensus 22 ~~~~-~~~~~~~q~f~~~~~~~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~---~~~GY~~~d~~~id~~~Gt~~d~~~ 97 (416)
+.++ ..+.+|||++.+.+. |||+||+++|||||+||||+|||+||++++ ++|||+|.||++|+|+|||++||++
T Consensus 90 ~~W~~~~~~viY~~~~~~f~--Gdl~gi~~~LdyL~~LGv~~I~L~Pi~~~~~~~~~~GY~v~dy~~vdp~~Gt~~d~~~ 167 (628)
T 1g5a_A 90 PDWILSNKQVGGVCYVDLFA--GDLKGLKDKIPYFQELGLTYLHLMPLFKCPEGKSDGGYAVSSYRDVNPALGTIGDLRE 167 (628)
T ss_dssp GGGGGCTTCCEEEECHHHHH--SSHHHHHTTHHHHHHHTCSEEEECCCBCCCSSCSTTTTSCSCSSSBCTTTCCHHHHHH
T ss_pred cccccCCCcEEEEEchhhhC--CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCCcCCcccCCcCccCCCHHHHHH
Confidence 3455 445899999987654 899999999999999999999999999987 4799999999999999999999999
Q ss_pred HHHHHHHCCCEEEEEEccccCcCCCCCCC------Cccccc----CCC--CCCCCCCceecCCC---C-C-----CCCCC
Q 014892 98 LLHKMKQHKVRAMADIVINHRVGTTQGHG------GKYNRY----DGI--PLSWDEHAVTSCTG---G-L-----GNGST 156 (416)
Q Consensus 98 Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~------~~~~~f----~~~--~~~~~~~~~~~~~~---~-~-----~~~~~ 156 (416)
||++||++||+||||+|+||+|.+|+|+. +.|..| .+. +.+|.......++. + + .....
T Consensus 168 Lv~~ah~~GI~VilD~V~NH~s~~~~wf~~~~~g~~~y~d~y~~~~~~~~P~~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 247 (628)
T 1g5a_A 168 VIAALHEAGISAVVDFIFNHTSNEHEWAQRCAAGDPLFDNFYYIFPDRRMPDQYDRTLREIFPDQHPGGFSQLEDGRWVW 247 (628)
T ss_dssp HHHHHHHTTCEEEEEECCSEEETTSHHHHHHHTTCGGGTTSBCEESSSHHHHHHTTTCCCSSTTTCSTTEEECTTSCEEE
T ss_pred HHHHHHHCCCEEEEEEecCcccccchhHHHHhcCCCccccccccCCCCCCcccccccccccCCCCCCCccccCCCCCEEe
Confidence 99999999999999999999999998643 122111 100 00111000000000 0 0 00011
Q ss_pred CCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCc-------------HHHHHHHHHhc---CC-ceEE
Q 014892 157 GDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYS-------------AKYVKEYIEGA---RP-IFSV 219 (416)
Q Consensus 157 ~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~-------------~~~~~~~~~~~---~~-~~~v 219 (416)
.++...+||||++||+|+++|++++++|+ ++||||||+|+|+++. .++|+++++.+ +| .+++
T Consensus 248 ~~f~~~~pdLN~~np~V~~~i~~~l~~w~-~~GvDGfRlDa~~~i~k~~g~~~~~~p~~~~~~~~~r~~~~~~~p~~~~i 326 (628)
T 1g5a_A 248 TTFNSFQWDLNYSNPWVFRAMAGEMLFLA-NLGVDILRMDAVAFIWKQMGTSCENLPQAHALIRAFNAVMRIAAPAVFFK 326 (628)
T ss_dssp CSSSTTEEEBCTTSHHHHHHHHHHHHHHH-TTTCSEEEETTGGGSCCCTTSCSSSCHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred ccCCCCCCccCCCCHHHHHHHHHHHHHHH-HcCCCEEEEecccccccccCccccCcHHHHHHHHHHHHHHHHhCCCeEEE
Confidence 22346789999999999999999999999 8999999999999884 46888887554 35 7899
Q ss_pred EcccCCCCCCCCCCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHh-cCchhhhhhhcCCCCCccccccCcceec
Q 014892 220 GEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAV-KGQFWRLRDAQGKPPGVMGWWPSRAVTF 298 (416)
Q Consensus 220 gE~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~f 298 (416)
||+|.+ ...+..|+.. ++++++|+|++...+..++ .++...+...+...... ..+...++|
T Consensus 327 gE~~~~---------------~~~~~~y~~~-~~~~~~y~f~l~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~~~~~nf 388 (628)
T 1g5a_A 327 SEAIVH---------------PDQVVQYIGQ-DECQIGYNPLQMALLWNTLATREVNLLHQALTYRHNL--PEHTAWVNY 388 (628)
T ss_dssp ECCCSC---------------HHHHGGGBST-TSBSEEECHHHHHHHHHHHHHCCCHHHHHHHHHSCCC--CTTCEEEEE
T ss_pred EEecCC---------------HHHHHHhhCC-CCcceeecHHHHHHHHHhhccCCHHHHHHHHHHhhcc--cCCCeeEee
Confidence 999964 2556677664 3578899999887777665 34443333322110000 012256899
Q ss_pred ccCCCCCCC--------------------C----------C-------C-C----------------------CCChhhH
Q 014892 299 LDNHDTGST--------------------Q----------A-------H-W----------------------PFPSNHI 318 (416)
Q Consensus 299 l~nHD~~R~--------------------~----------~-------~-~----------------------~~~~~~~ 318 (416)
++|||+... . + . . ....+++
T Consensus 389 l~nHD~i~~~~~~~~~~~~g~~~~~~~r~l~~~~~g~~~~s~~~g~~~~~n~d~~d~Ri~~~~as~~g~~~~~~~~~~~~ 468 (628)
T 1g5a_A 389 VRSHDDIGWTFADEDAAYLGISGYDHRQFLNRFFVNRFDGSFARGVPFQYNPSTGDCRVSGTAAALVGLAQDDPHAVDRI 468 (628)
T ss_dssp SCCSSCBCCCCCHHHHHHTTCCHHHHHHHHHHHHTTCSTTCCCCCEEECCCTTTCCCEEECCHHHHHTGGGTCTTHHHHH
T ss_pred hhccccccccccchhhhhccccchhHHHHHHHHhcCccccccccccccccCccchhhhhccccccccccccchhhHHHHH
Confidence 999996211 0 0 0 0 0012468
Q ss_pred HHHHHHHhcCCCeeEEecCCcCCC--------------------------c------------hhHHHHHHHHHHHHHhC
Q 014892 319 MEGYAYILMHPGIPSVFYDHFYDW--------------------------G------------DSIHNQIVKLMDVRRQQ 360 (416)
Q Consensus 319 ~~a~a~llt~pGiP~Iy~G~E~gw--------------------------~------------~~l~~~~~~Li~lR~~~ 360 (416)
++|++++||+||+|+||||+|+|. + .+++++||+||+||+++
T Consensus 469 ~la~a~llt~pG~P~IY~G~EiG~~~~~~~~~dp~~~~~~R~~~R~~~~W~~~~~~~~~~~~~~~l~~~~~~Li~lRk~~ 548 (628)
T 1g5a_A 469 KLLYSIALSTGGLPLIYLGDEVGTLNDDDWSQDSNKSDDSRWAHRPRYNEALYAQRNDPSTAAGQIYQDLRHMIAVRQSN 548 (628)
T ss_dssp HHHHHHHHHSSSEEEEETTGGGTCCCCSSGGGCTTTTTCGGGGGCCCCCHHHHTTTTCTTSHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhCCCCcEEEecccccCCCCcccccCchhcccCcccCCCCCCcchhhhccCCCCcHHHHHHHHHHHHHHHhhC
Confidence 999999999999999999999752 1 24889999999999999
Q ss_pred cccCCCCeEEEEec-CCEEEEEECCEEEEEEcCCCCC-----CC----CCCcEEeeeCCce
Q 014892 361 DIHSRSSIKILEAQ-SNLYSAIIGDKVCMKIGDGSWC-----PA----GKEWTLATSGHKY 411 (416)
Q Consensus 361 ~~l~~G~~~~~~~~-~~~~~~~R~~~~lvvinn~~~~-----~~----~~~~~~~ls~~~~ 411 (416)
|+|+.|.++.+..+ +++++|.|..+++|++|.+... +. .+.|+++++|..+
T Consensus 549 pal~~g~~~~l~~~~~~v~af~R~~~~lvv~N~s~~~~~~~l~~~~~~~~~~~~lls~~~~ 609 (628)
T 1g5a_A 549 PRFDGGRLVTFNTNNKHIIGYIRNNALLAFGNFSEYPQTVTAHTLQAMPFKAHDLIGGKTV 609 (628)
T ss_dssp GGGCSSCCEECCCSCTTEEEEEETTTEEEEEECSSSCEEECTTTTTTSCSEEEETTTCCEE
T ss_pred ccccCCceEEEecCCCcEEEEEEeCcEEEEEeCCCCcEEEecccccccCCceeEeecCCcc
Confidence 99999999888776 5899999955889999987532 11 1336777776544
|
| >3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-60 Score=502.18 Aligned_cols=354 Identities=14% Similarity=0.143 Sum_probs=260.0
Q ss_pred eeeccC-ceeEEEeeecCCCCCCcHHHHHhhhhhHHHcCCCEEEeCCCCCCC---CCCCcccccCCCCCCCCCCHHHHHH
Q 014892 22 AVIRNG-REILFQGFNWESCKHDWWRNLERKVPDISKSGFTSVWLPPATHSF---APEGYLPQNLYSLNSSYGSEHLLKA 97 (416)
Q Consensus 22 ~~~~~~-~~~~~q~f~~~~~~~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~---~~~GY~~~d~~~id~~~Gt~~d~~~ 97 (416)
+.|+.. +.||||++...+. |||+||+++|||||+||||+||||||++++ ++|||+|.||++|+|+|||++||++
T Consensus 83 ~~W~~~~~~viY~i~~~~F~--Gdl~gi~~~LdyL~~LGv~~I~L~Pi~~~~~~~~~~GY~~~dy~~vdp~~Gt~~df~~ 160 (644)
T 3czg_A 83 AGWFGQPHMLGYSAYADRFA--GTLQGVAERVPYLQELGVRYLHLLPFLRARAGDNDGGFAVSDYGQVEPSLGSNDDLVA 160 (644)
T ss_dssp TTGGGSTTCCEEEECHHHHH--SSHHHHHHTHHHHHHHTCCEEEECCCBCBCSSCCTTTTSBSCTTSBCGGGCCHHHHHH
T ss_pred CccccCCCcEEEEEechhhC--CCHHHHHHHHHHHHHcCCCEEEeCCCCcCCCCCCCCCcCcccccccCcccCCHHHHHH
Confidence 344443 4899999987665 899999999999999999999999999987 5799999999999999999999999
Q ss_pred HHHHHHHCCCEEEEEEccccCcCCCCCCCC------ccccc---CCC---CCCCCC--Ccee--------cCCCCCCCCC
Q 014892 98 LLHKMKQHKVRAMADIVINHRVGTTQGHGG------KYNRY---DGI---PLSWDE--HAVT--------SCTGGLGNGS 155 (416)
Q Consensus 98 Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~------~~~~f---~~~---~~~~~~--~~~~--------~~~~~~~~~~ 155 (416)
||++||++||+||||+|+||+|.+|+|+.. .|..| .+. +.+|.. ..++ .+.++.....
T Consensus 161 Lv~~aH~~GI~VilD~V~NH~s~~~~wf~~~~~~~~~y~d~y~~~~~~~~p~~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 240 (644)
T 3czg_A 161 LTSRLREAGISLCADFVLNHTADDHAWAQAARAGDARYLDYYHHFADRTVPDRYEATLGQVFPHTAPGNFTWVDDTAQWM 240 (644)
T ss_dssp HHHHHHHTTCEEEEEECCSEEETTSHHHHHHHTTCHHHHTTBCEESSSHHHHHHHHHCCCC------CCEEEETTTTEEE
T ss_pred HHHHHHHCCCEEEEEEecCCcccchhhHHHHhcCCCcccCceecCCCCCCCcchhhcccccCCCCCCCCccccCCCCceE
Confidence 999999999999999999999999986531 22111 100 001100 0000 0000001001
Q ss_pred CCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCc-------------HHHHHHHHHhcC---C-ceE
Q 014892 156 TGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYS-------------AKYVKEYIEGAR---P-IFS 218 (416)
Q Consensus 156 ~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~-------------~~~~~~~~~~~~---~-~~~ 218 (416)
...+...+||||++||+|+++|++++++|+ ++||||||+|+|+++. .+||+++++.++ | .++
T Consensus 241 ~~~f~~~~pdLN~~np~V~~~i~~~~~~wl-~~GvDGfRlDa~~~i~~~~~~~~~n~p~~~~~l~~~r~~~~~~~p~~~l 319 (644)
T 3czg_A 241 WTTFYPYQWDLNWSNPAVFGDMALAMLRLA-NLGVEAFRLDSTAYLWKRIGTDCMNQSEAHTLLVALRAVTDIVAPAVVM 319 (644)
T ss_dssp ECSSSTTEEEBCTTSHHHHHHHHHHHHHHH-HTTEEEEEEETGGGSCCCTTSCSSSCHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred ecccccCCCcCCCCCHHHHHHHHHHHHHHH-HcCCCEEEEecccccccccCCcccCcHHHHHHHHHHHHHHHHhCCCeEE
Confidence 112246789999999999999999999999 8999999999999884 468888876653 4 789
Q ss_pred EEcccCCCCCCCCCCCCccchhhHhHhhhhccC----CCcccccCchhhHHHHHHh-cCchhhhhhhcCCCCCccccccC
Q 014892 219 VGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGT----GQLSAAFDFTTKGILQEAV-KGQFWRLRDAQGKPPGVMGWWPS 293 (416)
Q Consensus 219 vgE~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----~~~~~~fdf~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~p~ 293 (416)
+||+|.+. ..+..|+... .+.+++|+|++...+..++ .++...+...+...... ..+.
T Consensus 320 igE~~~~~---------------~~~~~y~~~~~~~~~~~~~~ynf~~~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~~ 382 (644)
T 3czg_A 320 KAEAIVPM---------------TQLPPYFGSGVDEGHECHLAYHSTLMAAGWSALALQRGDILHNVIAHSPPL--PRHC 382 (644)
T ss_dssp EEECCSCG---------------GGSGGGGCCGGGTTSSCSEEECHHHHHHHHHHHHHTCTHHHHHHHHTCCCC--CTTC
T ss_pred EEEecCCH---------------HHHHHhhCCCcccccccceeechHHHHHHHHHhccCCHHHHHHHHHhhhcc--CCCC
Confidence 99999641 3344555432 3577899998877766665 45443343333211110 1123
Q ss_pred cceecccCCCCC--------------------CCCCCC-----------------C-----------------------C
Q 014892 294 RAVTFLDNHDTG--------------------STQAHW-----------------P-----------------------F 313 (416)
Q Consensus 294 ~~~~fl~nHD~~--------------------R~~~~~-----------------~-----------------------~ 313 (416)
..++|++|||+. |+.+.+ + .
T Consensus 383 ~~~nfl~nHD~~~~~~~~~~~~~~g~~~~~~~r~~~~~~~g~~~~s~~~G~~y~~N~t~d~Ri~g~las~~g~~~a~~~~ 462 (644)
T 3czg_A 383 AWLSYVRCHDDIGWNVLQHEACGNAAQPPFSLRDVARFYANAVPGSYARGESFQSSGDGVHGTNGMAAALAGIQAAQEAG 462 (644)
T ss_dssp EEEEESCCSSCBCGGGGHHHHTCCSSSCCCCHHHHHHHHTTCSTTCCCCCEEC-----CCCCEECCHHHHHTHHHHHHTT
T ss_pred eeeEEeccCcccccccchhhhhhccccchhhHHHHHHhhcCCCCcccccCcccccCCccccccccccccccchhhhhccc
Confidence 568999999963 211000 0 0
Q ss_pred C-------hhhHHHHHHHHhcCCCeeEEecCCcCCC--------------------------c------------hhHHH
Q 014892 314 P-------SNHIMEGYAYILMHPGIPSVFYDHFYDW--------------------------G------------DSIHN 348 (416)
Q Consensus 314 ~-------~~~~~~a~a~llt~pGiP~Iy~G~E~gw--------------------------~------------~~l~~ 348 (416)
+ .+++++|++++||+||+|+||||+|+|. + .++++
T Consensus 463 d~~~~~~~~~r~~la~a~llt~pG~P~IY~GdE~G~~~~~~~~~dp~~~~~~R~~~R~~m~W~~~~~~~~~~~~~~~l~~ 542 (644)
T 3czg_A 463 DAAALAVAVDRLVLLYAIALAMPGVPLIYMGDELAMVNDPGYRDDPHRQHEGRWLHRPAMDWQLAAQRHDAKSLSGTVYR 542 (644)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTSSEEEEEETTGGGTCCCCGGGGGSGGGTTCGGGGGCCCCCHHHHHGGGCTTSHHHHHHH
T ss_pred cchhhhhHHHHHHHHHHHHHHcCCcceEEcchhhcCCCCcccccChhhcccccccCCCCCCcchhhhccCCcccHHHHHH
Confidence 0 2467999999999999999999999752 1 14889
Q ss_pred HHHHHHHHHHhCcccCCC-CeEEEEec-CCEEEEEECCEEEEEEcCCCC
Q 014892 349 QIVKLMDVRRQQDIHSRS-SIKILEAQ-SNLYSAIIGDKVCMKIGDGSW 395 (416)
Q Consensus 349 ~~~~Li~lR~~~~~l~~G-~~~~~~~~-~~~~~~~R~~~~lvvinn~~~ 395 (416)
+||+||+|||++|+|+.| .++.+..+ +++++|.|+++++|++|.+..
T Consensus 543 ~~~~Li~lRk~~pal~~g~~~~~l~~~~~~vlaf~R~~~~lvv~N~s~~ 591 (644)
T 3czg_A 543 RLRGLIRQRAALGALAADQALASIALNDPRVFALTRGDSFIALHNFSDQ 591 (644)
T ss_dssp HHHHHHHHHHTCGGGSTTSCEEEECCSCTTEEEEEETTTEEEEEECSSS
T ss_pred HHHHHHHHHHhCccccCCCeeEEEecCCCCEEEEEECCeEEEEEECCCC
Confidence 999999999999999998 88888775 689999998789999999753
|
| >1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-59 Score=470.49 Aligned_cols=348 Identities=16% Similarity=0.224 Sum_probs=252.1
Q ss_pred cCceeEEEeeecCCCCCCcHHHHHhhhhhHHHcCCCEEEeCCCCCCC-----------CCCCcccccCCCCCCCCCCHHH
Q 014892 26 NGREILFQGFNWESCKHDWWRNLERKVPDISKSGFTSVWLPPATHSF-----------APEGYLPQNLYSLNSSYGSEHL 94 (416)
Q Consensus 26 ~~~~~~~q~f~~~~~~~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~-----------~~~GY~~~d~~~id~~~Gt~~d 94 (416)
..+++|||+|.|+ |+||+++|||||+||||+|||+||+++. .+|||+|+||+.++|+||+++|
T Consensus 3 ~~~~~~~q~f~~~------~~~i~~~l~yl~~lG~~~i~l~Pi~~~~~~~~~~~~~~~~~~gY~~~~y~~~~~~~G~~~d 76 (422)
T 1ua7_A 3 IKSGTILHAWNWS------FNTLKHNMKDIHDAGYTAIQTSPINQVKEGNQGDKSMSNWYWLYQPTSYQIGNRYLGTEQE 76 (422)
T ss_dssp TTTSCEEECTTBC------HHHHHHTHHHHHHTTCSEEEECCCEEECCTGGGCCBGGGGGGGGCEEEEEEEETTTEEHHH
T ss_pred CcCcEEEEEecCC------HHHHHHHHHHHHHcCCCEEEeCCccccccCCcCcCccCCccccccceeeeccCCCCCCHHH
Confidence 3568999999997 9999999999999999999999998743 1689999999999999999999
Q ss_pred HHHHHHHHHHCCCEEEEEEccccCcCCCCCCCCcccccCCCCCCCCC--CceecCCCCCCCCCCCCCCCCCCcCCCCCHH
Q 014892 95 LKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDE--HAVTSCTGGLGNGSTGDNFHGVPNIDHTQHF 172 (416)
Q Consensus 95 ~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~ 172 (416)
|++||++||++||+||||+|+||++.+++++....... .+|.. ....++.+.. ...++.+.++||||+++|+
T Consensus 77 ~~~lv~~~h~~Gi~VilD~V~NH~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~--~~~~~~~~~~~dln~~~~~ 150 (422)
T 1ua7_A 77 FKEMCAAAEEYGIKVIVDAVINHTTFDYAAISNEVKSI----PNWTHGNTQIKNWSDRW--DVTQNSLLGLYDWNTQNTQ 150 (422)
T ss_dssp HHHHHHHHHTTTCEEEEEECCSBCCSCTTTSCHHHHTS----TTCEEECCBCCCTTCHH--HHHHSBBTTBCEECTTSHH
T ss_pred HHHHHHHHHHCCCEEEEEeccCcccCCccccCccccCC----cccccCCCCCCCcCchh--cccccccCCCCccccCCHH
Confidence 99999999999999999999999999988754211100 11110 0011111100 0123456789999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCeEEecccCCCc--------HHHHHHHHHhcCCceEEEcccCCCCCCCCCCCCccchhhHhH
Q 014892 173 VRKDIIAWLRWLRNTVGFQDFRFDFARGYS--------AKYVKEYIEGARPIFSVGEYWDSCNYNSHGLDYNQDSHRQRI 244 (416)
Q Consensus 173 v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~--------~~~~~~~~~~~~~~~~vgE~~~~~~~~~~~~~~~~~~~~~~l 244 (416)
||++|++++++|+ ++||||||+|+|++++ .+||+++.. -.+.+++||+|.++. ..+
T Consensus 151 v~~~l~~~~~~w~-~~gvDGfR~D~~~~~~~~~~~~~~~~f~~~~~~-~~~~~~vgE~~~~~~--------------~~~ 214 (422)
T 1ua7_A 151 VQSYLKRFLERAL-NDGADGFRFDAAKHIELPDDGSYGSQFWPNITN-TSAEFQYGEILQDSA--------------SRD 214 (422)
T ss_dssp HHHHHHHHHHHHH-HTTCCEEEETTGGGSCCTTSGGGCCSHHHHHTC-SSCSEEEECCCCSTT--------------CCH
T ss_pred HHHHHHHHHHHHH-HcCCCEEEEEhhhhcCccchhhhHHHHHHHhhc-CCCceEEEEeecCCC--------------ccH
Confidence 9999999999999 7999999999999986 579998872 223789999997631 112
Q ss_pred hhhhccCCCcccccCchhhHHHHHHhcCc---hhhhhhhcCCCCCccccccCcceecccCCCCCCCCCC--CCCChhhHH
Q 014892 245 INWIDGTGQLSAAFDFTTKGILQEAVKGQ---FWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAH--WPFPSNHIM 319 (416)
Q Consensus 245 ~~~~~~~~~~~~~fdf~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~p~~~~~fl~nHD~~R~~~~--~~~~~~~~~ 319 (416)
..|.... .+.++.+...+++++.+. ...+.+. . ....|.++++|++|||+.|.... ...+..+.+
T Consensus 215 ~~y~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~-~~~~~~~~~~f~~nHD~~r~~~~~~~~~~~~~~~ 284 (422)
T 1ua7_A 215 AAYANYM----DVTASNYGHSIRSALKNRNLGVSNISHY-----A-SDVSADKLVTWVESHDTYANDDEESTWMSDDDIR 284 (422)
T ss_dssp HHHHTTS----EEECHHHHHHHHHHHHHTCCCHHHHSSC-----S-SSSCGGGEEECSSCHHHHHSTTCSSTTCCHHHHH
T ss_pred HHHhhcC----CcchhHHHHHHHHHHhCCCcCHHHHhhc-----c-ccCChhheeEEEecCCCCCCCccccccCCHHHHH
Confidence 3444321 345666777777777432 2222221 1 13356678999999999987532 123456789
Q ss_pred HHHHHHhc-CCCeeEEecCCcCCCc--------------hhHHHHHHHHHHHHHhCcccCCCCeEEEEe---cCCEEEEE
Q 014892 320 EGYAYILM-HPGIPSVFYDHFYDWG--------------DSIHNQIVKLMDVRRQQDIHSRSSIKILEA---QSNLYSAI 381 (416)
Q Consensus 320 ~a~a~llt-~pGiP~Iy~G~E~gw~--------------~~l~~~~~~Li~lR~~~~~l~~G~~~~~~~---~~~~~~~~ 381 (416)
+|++++++ .||+|+||||+|+|-. +.++. ++.|.+||+.+++++ |+...+.. ++++++|.
T Consensus 285 la~a~ll~~~~G~P~iy~G~E~g~~~~~~p~~~~~~~~~~~~~~-~~~l~~l~~~~~al~-g~~~~~~~~~~~~~v~af~ 362 (422)
T 1ua7_A 285 LGWAVIASRSGSTPLFFSRPEGGGNGVRFPGKSQIGDRGSALFE-DQAITAVNRFHNVMA-GQPEELSNPQGNNQIFMNQ 362 (422)
T ss_dssp HHHHHHHTSSSSEEEEECCCTTCBTTBSCCSSCBTBSCCCGGGG-CHHHHHHHHHHHHHT-TCCCCEECGGGCTTEEEEE
T ss_pred HHHHHHHhCCCCeeEEecCcccCCCCCCCCccCcCCCCCCchhh-CHHHHHHHHHHHhcC-CCceEEEeeCCCceEEEEE
Confidence 99999999 5999999999997521 23442 355666666666775 55555544 46799999
Q ss_pred ECCEEEEEEcCCCCC--------CCCCCcEEeeeCCceEE
Q 014892 382 IGDKVCMKIGDGSWC--------PAGKEWTLATSGHKYAV 413 (416)
Q Consensus 382 R~~~~lvvinn~~~~--------~~~~~~~~~ls~~~~~~ 413 (416)
|+++.+||+|++... .+.+.|+++++|..+++
T Consensus 363 R~~~~lVv~N~~~~~~~~~~~~~l~~g~~~d~l~~~~~~~ 402 (422)
T 1ua7_A 363 RGSHGVVLANAGSSSVSINTATKLPDGRYDNKAGAGSFQV 402 (422)
T ss_dssp ETTTEEEEEECSSSCEEEEEECCSCSEEEECTTSSCEEEE
T ss_pred cCCcEEEEEeCCCCCeEEEEecccCCCeeeeeecCceEEe
Confidence 987889999996532 12356888888876654
|
| >3ucq_A Amylosucrase; thermostability, amylose synthesis, sucrose isomerization, beta/alpha-barrel, carbohydrate binding, transferase; 1.97A {Deinococcus geothermalis} PDB: 3uer_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-58 Score=484.59 Aligned_cols=369 Identities=14% Similarity=0.097 Sum_probs=269.7
Q ss_pred eeeccC-ceeEEEeeecCCCCCCcHHHHHhhhhhHHHcCCCEEEeCCCCCCC---CCCCcccccCCCCCCCCCCHHHHHH
Q 014892 22 AVIRNG-REILFQGFNWESCKHDWWRNLERKVPDISKSGFTSVWLPPATHSF---APEGYLPQNLYSLNSSYGSEHLLKA 97 (416)
Q Consensus 22 ~~~~~~-~~~~~q~f~~~~~~~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~---~~~GY~~~d~~~id~~~Gt~~d~~~ 97 (416)
+.|+.. +.||||++.+.+. |||+||+++|||||+||||+|||+|+++++ +++||+|.||++|+|+|||++||++
T Consensus 88 ~~W~~~~~~viY~~~~~~f~--G~~~gl~~~LdyL~~lGv~~v~l~P~~~~~~~~~~~GY~~~dy~~i~~~~Gt~~d~~~ 165 (655)
T 3ucq_A 88 PDWLQRPEMVGYVAYTDRFA--GTLKGVEERLDYLEGLGVKYLHLMPLLRPREGENDGGYAVQDYRAVRPDLGTMDDLSA 165 (655)
T ss_dssp TTGGGSTTCCEEEECHHHHH--SSHHHHHTTHHHHHHTTCCEEEECCCEEECSSCCGGGTSEEEEEEECGGGCCHHHHHH
T ss_pred CCcccCCceEEEEEehhhhC--CCHHHHHHhhHHHHHcCCCEEEECCCcCCCCCCCCCCcCCcCcCccCccCCCHHHHHH
Confidence 344444 3499999987765 899999999999999999999999999875 5799999999999999999999999
Q ss_pred HHHHHHHCCCEEEEEEccccCcCCCCCCCC------cc----cccCCC----------CCCCC---CCceecCCC----C
Q 014892 98 LLHKMKQHKVRAMADIVINHRVGTTQGHGG------KY----NRYDGI----------PLSWD---EHAVTSCTG----G 150 (416)
Q Consensus 98 Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~------~~----~~f~~~----------~~~~~---~~~~~~~~~----~ 150 (416)
||++||++||+||+|+|+||+|.+|+|+.. .| .++.+. +..|. +.. ..+.+ +
T Consensus 166 lv~~~h~~Gi~Vi~D~V~NH~s~~~~wf~~~~~~~~~~~d~y~~~~~~~~~~~~~~~~p~~~~~~~~~~-~~~~~~~~~~ 244 (655)
T 3ucq_A 166 LARALRGRGISLVLDLVLNHVAREHAWAQKARAGDPKYRAYFHLFPDRRGPDAFEATLPEIFPDFAPGN-FSWDEEIGEG 244 (655)
T ss_dssp HHHHHHHTTCEEEEEECCSEEETTSHHHHHHHTTCHHHHTTBCEESSSHHHHHHHTTCCCSCTTTSCSS-EEEETTSSSS
T ss_pred HHHHHHHCCCEEEEEeeccccccchHHHHHhhcCCCCCcccEEEcCCCCCCccccccCccccccCCCCc-cccccccccc
Confidence 999999999999999999999999976431 11 111110 00000 000 00000 0
Q ss_pred CCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCc-------------HHHHHHHHHhcC---
Q 014892 151 LGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYS-------------AKYVKEYIEGAR--- 214 (416)
Q Consensus 151 ~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~-------------~~~~~~~~~~~~--- 214 (416)
........+...+||||++||+|+++|++++++|+ ++||||||+|+|+++. .++++++++.++
T Consensus 245 ~~~~~~~~f~~~qpDLn~~np~V~~~i~~~l~~w~-~~GvDGfRlDa~~~l~k~~g~~~~~~~~~~~~l~~~r~~~~~~~ 323 (655)
T 3ucq_A 245 EGGWVWTTFNSYQWDLNWANPDVFLEFVDIILYLA-NRGVEVFRLDAIAFIWKRLGTDCQNQPEVHHLTRALRAAARIVA 323 (655)
T ss_dssp SCEEEECSSSTTEEEBCTTSHHHHHHHHHHHHHHH-TTTCCEEEETTGGGSCCCTTSCSSSCHHHHHHHHHHHHHHHHHC
T ss_pred CCceEeccccCCCCccCCCCHHHHHHHHHHHHHHH-HCCCCEEEEechhhccccCCCccCCcHHHHHHHHHHHHHHHHhC
Confidence 11111223457789999999999999999999999 8999999999999884 578887766543
Q ss_pred C-ceEEEcccCCCCCCCCCCCCccchhhHhHhhhhccCC----CcccccCchhhHHHHHHh-cCchhhhhhhcCCCCCcc
Q 014892 215 P-IFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTG----QLSAAFDFTTKGILQEAV-KGQFWRLRDAQGKPPGVM 288 (416)
Q Consensus 215 ~-~~~vgE~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----~~~~~fdf~~~~~l~~~~-~~~~~~~~~~~~~~~~~~ 288 (416)
| .+++||+|.+ ...+..|+..+. +..++|||++...+..++ .++...+.+.+.....
T Consensus 324 p~~~~vgE~~~~---------------~~~~~~y~~~~~~~~~~~~~~fdf~l~~~~~~a~~~~~~~~L~~~l~~~~~-- 386 (655)
T 3ucq_A 324 PAVAFKAEAIVA---------------PADLIHYLGTRAHHGKVSDMAYHNSLMVQLWSSLASRNTRLFEEALRAFPP-- 386 (655)
T ss_dssp TTCEEEECCCCC---------------HHHHGGGTCCSSSSCCSCSEEECHHHHHHHHHHHHHCCCHHHHHHHHTCCC--
T ss_pred CCeEEEEecCCC---------------HHHHHHHhCCCCccccccCeEECccchHHHHHHHhcCCHHHHHHHHHhCcC--
Confidence 4 7899999965 356667776532 368899999998888877 4444444444332111
Q ss_pred ccccCcceecccCCCCCCCCCC----------------------------------------------C-C---------
Q 014892 289 GWWPSRAVTFLDNHDTGSTQAH----------------------------------------------W-P--------- 312 (416)
Q Consensus 289 ~~~p~~~~~fl~nHD~~R~~~~----------------------------------------------~-~--------- 312 (416)
...+...++|++|||+..+.-. . .
T Consensus 387 ~~~~~~~v~Fv~nHD~i~l~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~n~~~~~~~i~~~~~s~~g~~ 466 (655)
T 3ucq_A 387 KPTSTTWGLYVRCHDDIGWAISDEDAARAGLNGAAHRHFLSDFYSGQFPGSFARGLVFQYNPVNGDRRISGSAASLAGLE 466 (655)
T ss_dssp CCTTCEEEECSCCSSCBCCCCCHHHHHHTTCCHHHHHHHHHHHHTTCSTTCCCCCEEESCCTTTCCCEEECCHHHHTTHH
T ss_pred CCCCCeEEEEeeeCCCCCccCChHHHHhhcccchHHHHHHHHHhcccCCcccccCcccccccccccccccccccchhhHH
Confidence 1123356999999999432100 0 0
Q ss_pred -----CC-------hhhHHHHHHHHhcCCCeeEEecCCcCCCc--------------------------h----------
Q 014892 313 -----FP-------SNHIMEGYAYILMHPGIPSVFYDHFYDWG--------------------------D---------- 344 (416)
Q Consensus 313 -----~~-------~~~~~~a~a~llt~pGiP~Iy~G~E~gw~--------------------------~---------- 344 (416)
.+ .+++++|++++|++||+|+||||+|+|.. .
T Consensus 467 ~al~~~d~~~~~~~~~r~~la~aill~~pGiP~iy~GdE~G~~nd~~~~~d~~~~~~~R~~~R~~~~w~~v~~~~~d~~s 546 (655)
T 3ucq_A 467 AALETGDPGRIEDAVRRLLLLHTVILGFGGVPLLYMGDELALLNDYAFEDVPEHAPDNRWVHRPQMDWALAERVRQEPSS 546 (655)
T ss_dssp HHHHHCCHHHHHHHHHHHHHHHHHHHHSSSEEEEETTGGGTCCCCGGGGGSTTTTTCGGGGGCCCCCHHHHHHHHHCTTS
T ss_pred HHhccCCchhhhhHHHHHHHHHHHHHhCCCeeEEEchHhhcCCCchhhhccccccCcccccccCCCChHHHHHHhcCCCC
Confidence 00 13789999999999999999999998631 1
Q ss_pred ---hHHHHHHHHHHHHHhCcccCCC-CeEEEEec-CCEEEEEE---CCEEEEEEcCCCCCC----------CCCCcEEee
Q 014892 345 ---SIHNQIVKLMDVRRQQDIHSRS-SIKILEAQ-SNLYSAII---GDKVCMKIGDGSWCP----------AGKEWTLAT 406 (416)
Q Consensus 345 ---~l~~~~~~Li~lR~~~~~l~~G-~~~~~~~~-~~~~~~~R---~~~~lvvinn~~~~~----------~~~~~~~~l 406 (416)
.+++++|+||++|+++|+|+.| .++.+..+ +.+++|.| ++++++|+|.+.... .++.|++++
T Consensus 547 ~~~~v~~~~~~Li~lRk~~paf~~~~~~~~l~~~~~~vlaf~R~~~~~~llvv~N~s~~~~~v~l~~l~~~~~~~~~dll 626 (655)
T 3ucq_A 547 PAGRVNTGLRHLLRVRRDTPQLHASIESQVLPSPDSRALLLRRDHPLGGMVQVYNFSEETVMLPSHVLRDVLGDHVQDRL 626 (655)
T ss_dssp HHHHHHHHHHHHHHHHHTCGGGCTTSCCEECCCSSTTEEEEEECCTTCCEEEEEECSSSCCEEETHHHHHHHCSEEEETT
T ss_pred hHHHHHHHHHHHHHHHHhCccccCCCceEEEeCCCCcEEEEEEECCCCeEEEEEeCCCCcEEEEccccccccCCceEECC
Confidence 2489999999999999999998 58887655 58999999 567888888865331 123456666
Q ss_pred eCCce
Q 014892 407 SGHKY 411 (416)
Q Consensus 407 s~~~~ 411 (416)
+|..+
T Consensus 627 ~g~~~ 631 (655)
T 3ucq_A 627 SGSAF 631 (655)
T ss_dssp TCCEE
T ss_pred CCCcc
Confidence 65544
|
| >2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-58 Score=478.21 Aligned_cols=329 Identities=13% Similarity=0.114 Sum_probs=244.8
Q ss_pred CceeEEEeeecCCCCCCcHHHHHhhhhhHHHcCCCEEEeCCCCCCC--CCCCcccccCCCCCCCCCCHHHHHHHHHHHHH
Q 014892 27 GREILFQGFNWESCKHDWWRNLERKVPDISKSGFTSVWLPPATHSF--APEGYLPQNLYSLNSSYGSEHLLKALLHKMKQ 104 (416)
Q Consensus 27 ~~~~~~q~f~~~~~~~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~--~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~ 104 (416)
.+.+|||++.+.++..|||+||+++|||||+||||+||||||++++ .+|||++.||++|+|+|||++|||+||++||+
T Consensus 125 ~~~viYei~~~~f~~~G~~~gi~~~L~yl~~lGv~~I~L~Pi~~~~~~~~wGY~~~~y~~~~~~~Gt~~d~~~lv~~~H~ 204 (602)
T 2bhu_A 125 ADCVFYEVHVGTFTPEGTYRAAAEKLPYLKELGVTAIQVMPLAAFDGQRGWGYDGAAFYAPYAPYGRPEDLMALVDAAHR 204 (602)
T ss_dssp GGCCEEEECHHHHSSSCSHHHHHHTHHHHHHHTCCEEEECCCEECSSSCCCSTTCCEEEEECGGGCCHHHHHHHHHHHHH
T ss_pred ccceEEEEeecccccCCCHHHHHHHHHHHHHcCCCEEEECChhhccCCCCCCcccccCcccCcCCCCHHHHHHHHHHHHH
Confidence 4589999999999999999999999999999999999999999876 46799999999999999999999999999999
Q ss_pred CCCEEEEEEccccCcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHH
Q 014892 105 HKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWL 184 (416)
Q Consensus 105 ~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w 184 (416)
+||+||||+|+||++.++++.. .|.+ ..|.. .... ...+++|+++|+||++|++++++|
T Consensus 205 ~Gi~VilD~V~NH~~~~~~~~~----~~~~--~~~~~----~~~~-----------~w~~~ln~~~~~v~~~i~~~~~~W 263 (602)
T 2bhu_A 205 LGLGVFLDVVYNHFGPSGNYLS----SYAP--SYFTD----RFSS-----------AWGMGLDYAEPHMRRYVTGNARMW 263 (602)
T ss_dssp TTCEEEEEECCSCCCSSSCCHH----HHCG--GGEEE----EEEC-----------SSSEEECTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEEecccccccCCcccc----ccCc--ccccC----CCCC-----------CCCCCccCCCHHHHHHHHHHHHHH
Confidence 9999999999999998765321 1110 00100 0001 113789999999999999999999
Q ss_pred HHhcCCCeEEecccCCC----cHHHHHHHHHhcC---CceEEEcccCCCCCCCCCCCCccchhhHhHhhhhccCCCcccc
Q 014892 185 RNTVGFQDFRFDFARGY----SAKYVKEYIEGAR---PIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAA 257 (416)
Q Consensus 185 ~~~~gvDGfRlD~a~~~----~~~~~~~~~~~~~---~~~~vgE~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 257 (416)
++++||||||||+++++ +.+||+++.+.++ +.+++||.|...+ ..+.. ..++.+.
T Consensus 264 ~~~~gvDGfR~D~~~~i~~~~~~~fl~~~~~~v~~~~~~~li~E~~~~~~--------------~~~~~----~~g~~~~ 325 (602)
T 2bhu_A 264 LRDYHFDGLRLDATPYMTDDSETHILTELAQEIHELGGTHLLLAEDHRNL--------------PDLVT----VNHLDGI 325 (602)
T ss_dssp HHHHCCSEEEETTGGGCCCCSSSCHHHHHHHHHHTTCSCCEEEEECSSCC--------------THHHH----TTCCSEE
T ss_pred HHHhCCCEEEEechHhhhccchHHHHHHHHHHHhhcCCeEEEEEeCCCCc--------------ccccC----CCCcceE
Confidence 98899999999999999 6779999887753 4789999886521 00110 1234445
Q ss_pred cCchhhHHHHHHhcCch-----------hhhhhhcCCC------------------CCccccccCcceecccCCCCC---
Q 014892 258 FDFTTKGILQEAVKGQF-----------WRLRDAQGKP------------------PGVMGWWPSRAVTFLDNHDTG--- 305 (416)
Q Consensus 258 fdf~~~~~l~~~~~~~~-----------~~~~~~~~~~------------------~~~~~~~p~~~~~fl~nHD~~--- 305 (416)
+++.++..+...+.+.. ..+...+... .......|...++|++|||+.
T Consensus 326 ~n~~~~~~l~~~~~g~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~fl~nHD~~~n~ 405 (602)
T 2bhu_A 326 WTDDFHHETRVTLTGEQEGYYAGYRGGAEALAYTIRRGWRYEGQFWAVKGEEHERGHPSDALEAPNFVYCIQNHDQIGNR 405 (602)
T ss_dssp ECTHHHHHHHHHHHCCCSGGGGGCCCSHHHHHHHHHHSSSCEEEEECCTTCCEEEECCCTTCCGGGEEEESCCHHHHHTS
T ss_pred ECchhhHHHHHHhcCCCcccccccccCHHHHHHHHHhccccccccchhhccccccCccccCCCccceeeehhcCcccccc
Confidence 55555544444332210 1111110000 000011244679999999983
Q ss_pred ----CCCCCCCCChhhHHHHHHHHhcCCCeeEEecCCcCC----------------------------------------
Q 014892 306 ----STQAHWPFPSNHIMEGYAYILMHPGIPSVFYDHFYD---------------------------------------- 341 (416)
Q Consensus 306 ----R~~~~~~~~~~~~~~a~a~llt~pGiP~Iy~G~E~g---------------------------------------- 341 (416)
|+......+.+++++|++++||+||+|+||||+|+|
T Consensus 406 ~~g~r~~~~~~~~~~~~k~a~a~ll~~pG~P~iy~G~E~G~~~~~~~~~~~D~~~~~~~r~g~~~~~~~~~~~~~~r~p~ 485 (602)
T 2bhu_A 406 PLGERLHQSDGVTLHEYRGAAALLLTLPMTPLLFQGQEWAASTPFQFFSDHAGELGQAVSEGRKKEFGGFSGFSGEDVPD 485 (602)
T ss_dssp TTCCCGGGSTTCCHHHHHHHHHHHHHSSSEEEEETTGGGTCSSCCCCCCCCCHHHHHHHHHHHHHHC---------CCCC
T ss_pred CccchhhhhhcccHHHHHHHHHHHHhCCCCcEEecchhhcCcCCCcccccCCHHHhhhhhhcchhhhhhcccccccCCCC
Confidence 332222235678999999999999999999999965
Q ss_pred -------------Cc-------hhHHHHHHHHHHHHHhCcccCCCCeEEEEe---cCCEEEEEE---CCEEEEEEcCCCC
Q 014892 342 -------------WG-------DSIHNQIVKLMDVRRQQDIHSRSSIKILEA---QSNLYSAII---GDKVCMKIGDGSW 395 (416)
Q Consensus 342 -------------w~-------~~l~~~~~~Li~lR~~~~~l~~G~~~~~~~---~~~~~~~~R---~~~~lvvinn~~~ 395 (416)
|. .+++++||+||+|||++|+|+.|+++.+.. ++ +++|.| +++++|++|.+..
T Consensus 486 ~~~~~~f~~~~l~w~~~q~~~~~s~~~~yr~Li~LRk~~pal~~g~~~~~~~~~~~~-v~a~~R~~~~~~~lVv~N~s~~ 564 (602)
T 2bhu_A 486 PQAEQTFLNSKLNWAEREGGEHARTLRLYRDLLRLRREDPVLHNRQRENLTTGHDGD-VLWVRTVTGAGERVLLWNLGQD 564 (602)
T ss_dssp TTSHHHHHTTSCCSGGGGSHHHHHHHHHHHHHHHHHHHCTTTTCCCGGGEEEEEETT-EEEEEEEETTEEEEEEEECSSS
T ss_pred CccccccccccCChhhhcccccHHHHHHHHHHHHHHhcChhhhcCCcccccccccCC-eEEEEEEeCCCcEEEEEeCCCC
Confidence 21 258899999999999999999998876544 45 999988 5678888888653
|
| >2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-57 Score=481.53 Aligned_cols=358 Identities=17% Similarity=0.204 Sum_probs=254.9
Q ss_pred cCceeEEEeeecCCC--------CCCcHHHHHh-----------hhhhHHHcCCCEEEeCCCCCCCC----------CCC
Q 014892 26 NGREILFQGFNWESC--------KHDWWRNLER-----------KVPDISKSGFTSVWLPPATHSFA----------PEG 76 (416)
Q Consensus 26 ~~~~~~~q~f~~~~~--------~~G~~~gi~~-----------~LdyLk~LGv~~I~L~Pi~~~~~----------~~G 76 (416)
..+.||||++.++++ ..|+|.|+++ +|||||+||||+||||||+++++ +||
T Consensus 212 ~~~~viYei~v~~F~~~~~~g~~~~G~~~g~~e~~~~~l~Gi~~~LdyLk~LGvtaI~L~Pi~~~~~~de~~~~~~~~wG 291 (718)
T 2e8y_A 212 PVDAVIYETHLRDFSIHENSGMINKGKYLALTETDTQTANGSSSGLAYVKELGVTHVELLPVNDFAGVDEEKPLDAYNWG 291 (718)
T ss_dssp GGGCCEEEECHHHHHHSTTSCCSSTTSGGGGGCTTCBCTTSCBCHHHHHHHHTCSEEEESCCEEESSSCTTSGGGCCCCC
T ss_pred hhhcEEEEEehHHhcCCCCCCCCCCCCeeccccccccccccchhhhHHHHHcCCCEEEECCccccCccccccccccCcCC
Confidence 467899999998764 3378888766 89999999999999999997654 499
Q ss_pred cccccCCCCCCCCCC--------HHHHHHHHHHHHHCCCEEEEEEccccCcCCC-CCCCCcccccCCCCCCCCCCceecC
Q 014892 77 YLPQNLYSLNSSYGS--------EHLLKALLHKMKQHKVRAMADIVINHRVGTT-QGHGGKYNRYDGIPLSWDEHAVTSC 147 (416)
Q Consensus 77 Y~~~d~~~id~~~Gt--------~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~-~~~~~~~~~f~~~~~~~~~~~~~~~ 147 (416)
|+|.||++|+++||+ ++|||+||++||++||+||||+|+||++.++ +++... . +..|....
T Consensus 292 Yd~~dy~a~~~~yg~~p~~g~~~~~dfk~LV~~aH~~GI~VIlDvV~NHt~~~~~~~f~~~----~--p~y~~~~~---- 361 (718)
T 2e8y_A 292 YNPLHFFAPEGSYASNPHDPQTRKTELKQMINTLHQHGLRVILDVVFNHVYKRENSPFEKT----V--PGYFFRHD---- 361 (718)
T ss_dssp CSEEEEEEECSTTSSCSSSHHHHHHHHHHHHHHHHHTTCEEEEEECTTCCSSGGGSHHHHH----S--TTTSBCBC----
T ss_pred CCccCCCCcCcccccCCCCccccHHHHHHHHHHHHHCCCEEEEEEecccccCccccccccc----C--CCeEEecC----
Confidence 999999999999996 6999999999999999999999999999987 333211 0 00010000
Q ss_pred CCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcHHHHHHHHHhcC---C-ceEEEccc
Q 014892 148 TGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGAR---P-IFSVGEYW 223 (416)
Q Consensus 148 ~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~~~~~~~~~~~~---~-~~~vgE~~ 223 (416)
.++...... ...+|||++||+||++|++++++|++++||||||||++++++.++|+++.+.++ | .+++||.|
T Consensus 362 ~~g~~~n~~----~~g~dln~~np~Vr~~i~d~~~~Wl~e~gVDGfR~D~~~~~~~~~~~~~~~~~~~~~p~~~ligE~w 437 (718)
T 2e8y_A 362 ECGKPSNGT----GVGNDIASERRMARKFIADCVVYWLEEYNVDGFRFDLLGILDIDTVLYMKEKATKAKPGILLFGEGW 437 (718)
T ss_dssp TTSSBCCTT----SSSCCBCTTSHHHHHHHHHHHHHHHHHHCCCEEEETTGGGSBHHHHHHHHHHHHHHSTTCEEEECCC
T ss_pred CCCcccCCC----CcccccccCCHHHHHHHHHHHHHHHHHhCCCEEEEeccccCCHHHHHHHHHHHHHhCCCeEEEEeec
Confidence 011100011 124799999999999999999999988999999999999999999999887653 4 78999999
Q ss_pred CCC-CCCCCCCCCccchhhHhHhhhhc-cCCC--cccccCchhhHHHHHH---------hcCc---hhhhhhhcCCCCCc
Q 014892 224 DSC-NYNSHGLDYNQDSHRQRIINWID-GTGQ--LSAAFDFTTKGILQEA---------VKGQ---FWRLRDAQGKPPGV 287 (416)
Q Consensus 224 ~~~-~~~~~~~~~~~~~~~~~l~~~~~-~~~~--~~~~fdf~~~~~l~~~---------~~~~---~~~~~~~~~~~~~~ 287 (416)
+.. ++.. . ..+.. ..++ ..+.|++.++..+... ..|. ...+...+.....+
T Consensus 438 ~~~~~~~~------------~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~f~~~~~~f~~g~~~~~~~l~~~l~~~~~~ 504 (718)
T 2e8y_A 438 DLATPLPH------------E-QKAALANAPRMPGIGFFNDMFRDAVKGNTFHLKATGFALGNGESAQAVMHGIAGSSGW 504 (718)
T ss_dssp CCCCSSCG------------G-GBCCGGGGGGCTTCEEECHHHHHHHHCCSSSTTCCCGGGTCGGGHHHHHHHHBTTSCB
T ss_pred CCCCcccc------------c-cccccccccCCCceEEEChHHHHHhhcccccccccceecCChhhHHHHHHHHhcCccc
Confidence 752 1110 0 00000 0011 1345666666655531 1121 12222222111101
Q ss_pred -----cccccCcceecccCCCCCCCCCCCC----C-----ChhhHHHHHHHHhcCCCeeEEecCCcCCC-----------
Q 014892 288 -----MGWWPSRAVTFLDNHDTGSTQAHWP----F-----PSNHIMEGYAYILMHPGIPSVFYDHFYDW----------- 342 (416)
Q Consensus 288 -----~~~~p~~~~~fl~nHD~~R~~~~~~----~-----~~~~~~~a~a~llt~pGiP~Iy~G~E~gw----------- 342 (416)
....|...++|++|||+.|+.+.+. . ..+++++|++++||+||+||||||+|+|-
T Consensus 505 ~~~~~~~~~~~~~vnfv~nHD~~rl~~~~~~~~~~~~~~~~~~~~kla~a~ll~~~G~P~iy~GdE~g~~~~g~~~~y~~ 584 (718)
T 2e8y_A 505 KALAPIVPEPSQSINYVESHDNHTFWDKMSFALPQENDSRKRSRQRLAVAIILLAQGVPFIHSGQEFFRTKQGVENSYQS 584 (718)
T ss_dssp TTBCCSSSSGGGEEECSCCSSSSCHHHHHHHHCTTCCHHHHHHHHHHHHHHHHTSBSEEEEETTGGGTCCCTTCSCCTTC
T ss_pred cccccccCCcccEEEEEecCCCchHHhhhhccCCCCCHHHHHHHHHHHHHHHHHCCCCcEEeechhhCccCCCCCcccCC
Confidence 1123557899999999999754321 1 12578999999999999999999999752
Q ss_pred ---------c-----hhHHHHHHHHHHHHHhCcccCCCCe-------EEEEecCCEEEEEEC--------CEEEEEEcCC
Q 014892 343 ---------G-----DSIHNQIVKLMDVRRQQDIHSRSSI-------KILEAQSNLYSAIIG--------DKVCMKIGDG 393 (416)
Q Consensus 343 ---------~-----~~l~~~~~~Li~lR~~~~~l~~G~~-------~~~~~~~~~~~~~R~--------~~~lvvinn~ 393 (416)
+ .++++++|+||+|||++|+|+.|++ ..+..++++++|.|. ++++|++|.+
T Consensus 585 ~d~~~~~~W~~~~~~~~l~~~~~~Li~lRk~~pal~~g~~~~i~~~~~~~~~~~~v~a~~r~~~~~~~~~~~~lVv~N~~ 664 (718)
T 2e8y_A 585 SDSINQLDWDRRETFKEDVHYIRRLISLRKAHPAFRLRSAADIQRHLECLTLKEHLIAYRLYDLDEVDEWKDIIVIHHAS 664 (718)
T ss_dssp CHHHHSCCHHHHHHTHHHHHHHHHHHHHHHHCGGGGCCSHHHHHHHEEEEEECSSEEEEEECCCTTTCSSSEEEEEEECS
T ss_pred CccccccCcccccccCHHHHHHHHHHHHHhhChhhccCchhhhccceEEecCCCCEEEEEEecCCCCCCCCeEEEEEeCC
Confidence 1 3689999999999999999999975 344556789999983 3789999986
Q ss_pred CCC-----CCCCCcEEeeeCCc
Q 014892 394 SWC-----PAGKEWTLATSGHK 410 (416)
Q Consensus 394 ~~~-----~~~~~~~~~ls~~~ 410 (416)
... |..+.|++++++..
T Consensus 665 ~~~~~~~lp~~g~~~~l~~~~~ 686 (718)
T 2e8y_A 665 PDSVEWRLPNDIPYRLLCDPSG 686 (718)
T ss_dssp SSEEEEECSSCSCEEEEEETTE
T ss_pred CCCEEEECCCCCcEEEEecCCC
Confidence 532 32457888877653
|
| >3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-57 Score=476.05 Aligned_cols=353 Identities=11% Similarity=0.098 Sum_probs=260.3
Q ss_pred eeccCceeEEEeeecCCCC----CCcHHHHHhhhhhHHHcCCCEEEeCCCCCCCC---------------CCC--ccccc
Q 014892 23 VIRNGREILFQGFNWESCK----HDWWRNLERKVPDISKSGFTSVWLPPATHSFA---------------PEG--YLPQN 81 (416)
Q Consensus 23 ~~~~~~~~~~q~f~~~~~~----~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~---------------~~G--Y~~~d 81 (416)
|-+...++|||+|.+.++. .|||+||+++|||||+||||+|||+||+++++ ++| |++.|
T Consensus 226 r~~~~~~~iYEi~~rsf~~~~~~~Gd~~gi~~~LdyLk~LGvt~I~L~Pi~~~~~~~~~g~~n~~~~~~~d~GspY~i~d 305 (695)
T 3zss_A 226 RERALYGAWYEFFPRSEGTPHTPHGTFRTAARRLPAIAAMGFDVVYLPPIHPIGTTHRKGRNNTLSATGDDVGVPWAIGS 305 (695)
T ss_dssp CHHHHCEEEEECCGGGSCCSSCCSCCHHHHGGGHHHHHHTTCCEEEECCCSCBCCTTCCCGGGCSSCCTTCCCCTTSBCB
T ss_pred ccccccceEEEEehhHhcCCCCCCCCHHHHHHHHHHHHhCCCCEEEECCcccCCccccccccccccccccCCCCcccccC
Confidence 3444567999999998765 69999999999999999999999999999864 345 88888
Q ss_pred ----CCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccccCcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCC
Q 014892 82 ----LYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTG 157 (416)
Q Consensus 82 ----~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (416)
||+|+|+|||.+|||+||++||++||+||||+|+|| +.+++|+.....+|. |.+.....+.. ...
T Consensus 306 ~~~~y~~idp~~Gt~edfk~LV~~aH~~GI~VilD~V~Nh-s~~~~~~~~~~dwf~-----~~~dg~~~~~~-----~~~ 374 (695)
T 3zss_A 306 PEGGHDSIHPALGTLDDFDHFVTEAGKLGLEIALDFALQC-SPDHPWVHKHPEWFH-----HRPDGTIAHAE-----NPP 374 (695)
T ss_dssp TTBCTTSCCTTTCCHHHHHHHHHHHHHTTCEEEEEECCEE-CTTSTHHHHCGGGSC-----CCTTSCCCCEE-----ETT
T ss_pred CCCCccccCcccCCHHHHHHHHHHHHHCCCEEEEEeeccC-Cccchhhhcccceee-----ecCCCCcccCC-----CCC
Confidence 999999999999999999999999999999999998 777776543222222 11111000000 011
Q ss_pred CCCCCCCcCCCCC--HHHHHHHHHHHHHHHHhcCCCeEEecccCCCcHHHHHHHHHhcC---C-ceEEEcccCCCCCCCC
Q 014892 158 DNFHGVPNIDHTQ--HFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGAR---P-IFSVGEYWDSCNYNSH 231 (416)
Q Consensus 158 ~~~~~~~dln~~~--~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~~~~~~~~~~~~---~-~~~vgE~~~~~~~~~~ 231 (416)
..|.++++||+.| |+|+++|++++++|++ +||||||+|++++++.+||+++++.++ | .+++||+|..
T Consensus 375 ~~~~~~~dLn~~n~~p~V~~~l~~~l~~Wi~-~GVDGfRlD~a~~~~~~f~~~~~~~v~~~~pd~~~vgE~~~~------ 447 (695)
T 3zss_A 375 KKYQDIYPIAFDADPDGLATETVRILRHWMD-HGVRIFRVDNPHTKPVAFWERVIADINGTDPDVIFLAEAFTR------ 447 (695)
T ss_dssp EEETTCEECCCSSCHHHHHHHHHHHHHHHHH-TTCCEEEESSGGGSCHHHHHHHHHHHHHHCTTCEEEECCCSC------
T ss_pred ccccccccccccCCcHHHHHHHHHHHHHHHH-hCCCEEEecCcchhhHHHHHHHHHHHHhhCCCceEEEeecCC------
Confidence 2245678999999 9999999999999995 999999999999999999999988764 4 7899999964
Q ss_pred CCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHhcCchhhhhhhcCCCCCccccccCcceecccCCCCCCCCCCC
Q 014892 232 GLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKGQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHW 311 (416)
Q Consensus 232 ~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~fl~nHD~~R~~~~~ 311 (416)
...+..+. . .++++.+++........ ...+....+... ... ....++|++|||+.|+.+..
T Consensus 448 ---------p~~~~~l~-~-~gfd~~~~y~~~~~~~~----~l~~~~~~l~~~---~~~-~~~~~~FvdNHD~~R~~s~~ 508 (695)
T 3zss_A 448 ---------PAMMATLA-Q-IGFQQSYTYFTWRNTKQ----ELTEYLTELSGE---AAS-YMRPNFFANTPDILHAYLQH 508 (695)
T ss_dssp ---------HHHHHHHH-H-TTCSEEECSGGGCCSHH----HHHHHHHHHTTG---GGG-TCCEEEESCBTTBCCHHHHH
T ss_pred ---------hHHhhhhh-c-cCcCceechhhhhcchh----HHHHHHHhhhhh---hhh-cccceecccCCCccchhccc
Confidence 12222222 2 23555666543211110 111111111110 111 12356899999999976544
Q ss_pred CCChhhHHHHHHHHhcCCCeeEEecCCcCCC------------------------c------hhHHHHHHHHHHHHHhCc
Q 014892 312 PFPSNHIMEGYAYILMHPGIPSVFYDHFYDW------------------------G------DSIHNQIVKLMDVRRQQD 361 (416)
Q Consensus 312 ~~~~~~~~~a~a~llt~pGiP~Iy~G~E~gw------------------------~------~~l~~~~~~Li~lR~~~~ 361 (416)
+ +..++++++++++|+||+|+||||+|+|. + .+++++||+|++|||++|
T Consensus 509 g-~~~~~kla~all~tl~GiP~IYyGdE~G~~g~~dp~~~ey~d~e~~~r~p~~W~~~~~~~~~l~~~ik~Li~LRk~~p 587 (695)
T 3zss_A 509 G-GRPAFEVRAVLAATLSPTWGIYSGYELCENTPLREGSEEYLDSEKYQLKPRDWTRAAREGTTIAPLVTRLNTIRRENP 587 (695)
T ss_dssp H-CHHHHHHHHHHHHHHCSEEEEETTGGGTCCCBSSTTCCSBTTCTTSSCCCCCHHHHHHHTCSCHHHHHHHHHHHHHCG
T ss_pred c-hHHHHHHHHHHHHhcCCCcEEEcCeeccccCCCCCCccccccccccccCCCCccccccccchHHHHHHHHHHHHHhCH
Confidence 3 45688899999999999999999999852 1 358999999999999999
Q ss_pred ccCCC-CeEEEEe-cCCEEEEEE---CCEEEEEEcCCCCC--------C-------CC--CCcEEeeeCCceEE
Q 014892 362 IHSRS-SIKILEA-QSNLYSAII---GDKVCMKIGDGSWC--------P-------AG--KEWTLATSGHKYAV 413 (416)
Q Consensus 362 ~l~~G-~~~~~~~-~~~~~~~~R---~~~~lvvinn~~~~--------~-------~~--~~~~~~ls~~~~~~ 413 (416)
+|+.| .++.+.. ++++++|.| +++++||+|++... | .. ..++++++|+.|.+
T Consensus 588 aL~~g~~~~~~~~~~~~vlaf~R~~~~~~vlVviN~s~~~~~~~tv~Lp~~~~g~~~~~~~~~~Dllsg~~~~~ 661 (695)
T 3zss_A 588 ALRQLRDLHFHPTDKEEVIAYSKRQGSNTVLVVVNLDPRHTQEATVSLDMPQLGLDWHESVPVRDELTGETYHW 661 (695)
T ss_dssp GGGCSSCCEECCBSCTTEEEEEEEETTEEEEEEEECCSSSCEEEEEECCHHHHTCCTTCEEEEEETTTCCEEEE
T ss_pred HhcCCCcEEEEEcCCCcEEEEEEEcCCCEEEEEEECCCCCCceEEEEeCcHHhCCCCCCceEEEECCCCCEEee
Confidence 99986 7777654 467999998 67899999997421 1 11 15889999998875
|
| >4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-56 Score=458.51 Aligned_cols=360 Identities=18% Similarity=0.260 Sum_probs=257.9
Q ss_pred eeeeccCceeEEEeeecCCCCCCcHHHHHhhh-hhHHHcCCCEEEeCCCCCCC--------CCCCcccccCCCCCCCCCC
Q 014892 21 RAVIRNGREILFQGFNWESCKHDWWRNLERKV-PDISKSGFTSVWLPPATHSF--------APEGYLPQNLYSLNSSYGS 91 (416)
Q Consensus 21 ~~~~~~~~~~~~q~f~~~~~~~G~~~gi~~~L-dyLk~LGv~~I~L~Pi~~~~--------~~~GY~~~d~~~id~~~Gt 91 (416)
.|++++|+++|+|+|.|. |+.|.+++ +||++||||+|||||+.++. .++||+|.| |+|+|+|||
T Consensus 3 ~p~~~~g~~~i~~~f~W~------w~~ia~e~~~yl~~~G~~~v~~~P~~e~~~~~~~~~~~~~~Y~~~d-y~i~~~~Gt 75 (496)
T 4gqr_A 3 SPNTQQGRTSIVHLFEWR------WVDIALECERYLAPKGFGGVQVSPPNENVAIYNPFRPWWERYQPVS-YKLCTRSGN 75 (496)
T ss_dssp SCCCCTTCCEEEEETTCC------HHHHHHHHHHTTTTTTCCEEEECCCSCBBCCTTTTSCGGGGGSBSC-SCSCBTTBC
T ss_pred CCCCCCCCcEEEEecCCC------HHHHHHHHHHHHHHhCCCEEEeCccccCccCCCCCCCcccccCccC-ceeCCCCCC
Confidence 488999999999999998 99998766 89999999999999999873 147999999 689999999
Q ss_pred HHHHHHHHHHHHHCCCEEEEEEccccCcCCCCCCCCcc---cccCC-----CCCCCCCCce----ecCCCCCCC------
Q 014892 92 EHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKY---NRYDG-----IPLSWDEHAV----TSCTGGLGN------ 153 (416)
Q Consensus 92 ~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~---~~f~~-----~~~~~~~~~~----~~~~~~~~~------ 153 (416)
++|||+||++||++||+||||+|+||++.+++++.... ..+.. ...+|..... +....+...
T Consensus 76 ~~df~~lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (496)
T 4gqr_A 76 EDEFRNMVTRCNNVGVRIYVDAVINHMCGNAVSAGTSSTCGSYFNPGSRDFPAVPYSGWDFNDGKCKTGSGDIENYNDAT 155 (496)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSEEEETTSCSBSCBTTCCCBBTTTTBBTTTTBCGGGBSTTTCCSSSSBCCCTTCHH
T ss_pred HHHHHHHHHHHHHCCCEEEEEEccCcCCCccccccccCcCCcccccccccCCCCCCCccccCCCcccCCCCcccccCCcc
Confidence 99999999999999999999999999999988654211 11110 0001110000 000000000
Q ss_pred CCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcHHHHHHHHHhcCC-----------ceEEEcc
Q 014892 154 GSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGARP-----------IFSVGEY 222 (416)
Q Consensus 154 ~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~~~~~~~~~~~~~-----------~~~vgE~ 222 (416)
....|++.++||||++||+||++|++++++|+ ++||||||+|+|++++.++|+++...++. .++++|.
T Consensus 156 ~~~~~~~~~~~Dln~~n~~V~~~l~~~~~~~~-~~gvDGfR~D~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 234 (496)
T 4gqr_A 156 QVRDCRLTGLLDLALEKDYVRSKIAEYMNHLI-DIGVAGFRLDASKHMWPGDIKAILDKLHNLNSNWFPAGSKPFIYQEV 234 (496)
T ss_dssp HHHHSBGGGEEEBCTTSHHHHHHHHHHHHHHH-HHTCCEEEETTGGGSCHHHHHHHHTTCCCCCTTTSCTTCCCEEEECC
T ss_pred eeEeeecCCCCccccCCHHHHHHHHHHHHHHH-hcCcceeecccccccchHHHHHHHHHHHhhccchhcccCcceEEeee
Confidence 11234567899999999999999999999999 89999999999999999999999988752 4788998
Q ss_pred cCCCCCCCCCCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHhcCc-h--hhhhhhcCCCCCccccccCcceecc
Q 014892 223 WDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKGQ-F--WRLRDAQGKPPGVMGWWPSRAVTFL 299 (416)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~~~~-~--~~~~~~~~~~~~~~~~~p~~~~~fl 299 (416)
|....- . +..+ .. .+...+++|++...+..++... . ......+.. ......|..+++|+
T Consensus 235 ~~~~~~----~----------~~~~-~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~v~Fv 296 (496)
T 4gqr_A 235 IDLGGE----P----------IKSS-DY-FGNGRVTEFKYGAKLGTVIRKWNGEKMSYLKNWGE--GWGFVPSDRALVFV 296 (496)
T ss_dssp CCCSSS----S----------CCGG-GG-TTTSEEECHHHHHHHHHHHTTGGGCCGGGGGGTTG--GGTCCCGGGEEECS
T ss_pred eccCcc----c----------cchh-hh-cCCCcccchhhHHHHHHHHhhccchhHHHHHhhhh--hhccCCccceeeec
Confidence 865210 0 0001 00 1345788999888888887332 1 112222211 11122355889999
Q ss_pred cCCCCCCCCCCCCC------ChhhHHHHHHHHhcCC-CeeEEecCCcCCC------------------------------
Q 014892 300 DNHDTGSTQAHWPF------PSNHIMEGYAYILMHP-GIPSVFYDHFYDW------------------------------ 342 (416)
Q Consensus 300 ~nHD~~R~~~~~~~------~~~~~~~a~a~llt~p-GiP~Iy~G~E~gw------------------------------ 342 (416)
+|||++|+.+.... +..++++|++++++.| |+|+||+|.|++-
T Consensus 297 ~NHD~~R~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~G~P~i~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (496)
T 4gqr_A 297 DNHDNQRGHGAGGASILTFWDARLYKMAVGFMLAHPYGFTRVMSSYRWPRQFQNGNDVNDWVGPPNNNGVIKEVTINPDT 376 (496)
T ss_dssp CCTTGGGSSSTTGGGCCCGGGHHHHHHHHHHHHHSCSSEEEEEECBCCCCCEETTEETTTTCCSSEETTEECCCCBCTTS
T ss_pred ccccccccccccCCccccccCHHHHHHHHHHHHhccCCccceeecccccccccCCCCCCccccccCCCccccccccCccc
Confidence 99999998765421 3346778888888887 9999988776521
Q ss_pred ------c-hhHHHHHHHHHHHHHhCcccCCCCe-EEEEecCCEEEEEECCEEEEEEcCCCCC--------CCCCCcEEee
Q 014892 343 ------G-DSIHNQIVKLMDVRRQQDIHSRSSI-KILEAQSNLYSAIIGDKVCMKIGDGSWC--------PAGKEWTLAT 406 (416)
Q Consensus 343 ------~-~~l~~~~~~Li~lR~~~~~l~~G~~-~~~~~~~~~~~~~R~~~~lvvinn~~~~--------~~~~~~~~~l 406 (416)
. ...++.|++|+++|+.. ..... .....+++++||.|+++++||+|++... .+.|+|++++
T Consensus 377 ~~~~~~~~~~~~~~i~~l~~~r~~~---~g~~~~~~~~~~~~~iaF~Rg~~~~V~~N~~~~~~~~~~~t~lp~G~y~Dvl 453 (496)
T 4gqr_A 377 TCGNDWVCEHRWRQIRNMVIFRNVV---DGQPFTNWYDNGSNQVAFGRGNRGFIVFNNDDWSFSLTLQTGLPAGTYCDVI 453 (496)
T ss_dssp CBCTTBCCGGGSHHHHHHHHHHHHT---TTCCEEEEEECSSSEEEEEETTTEEEEEECSSSCEEEEEECCCCSEEEECTT
T ss_pred cccchhhHHHHHHHHHHHHHHHhhc---cCCceEEEEeCCCCEEEEEeCCcEEEEEECCCCCEEEEEEcCCCCcEEEEEE
Confidence 0 12467899999999865 22223 3344556899999999999999996532 1246788888
Q ss_pred eCC
Q 014892 407 SGH 409 (416)
Q Consensus 407 s~~ 409 (416)
+|.
T Consensus 454 sg~ 456 (496)
T 4gqr_A 454 SGD 456 (496)
T ss_dssp TCC
T ss_pred cCc
Confidence 764
|
| >1r7a_A Sucrose phosphorylase; beta-alpha-barrels, dimer, glycoside hydrolase, transferase; 1.77A {Bifidobacterium adolescentis} SCOP: b.71.1.1 c.1.8.1 PDB: 2gdv_A* 2gdu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-56 Score=460.01 Aligned_cols=333 Identities=14% Similarity=0.154 Sum_probs=244.4
Q ss_pred ceeEEEeeecCCCCCCcHHHHHhhhh-hHHHcCCCEEEeCCCC-CCCC-CCCcccccCCCCCCCCCCHHHHHHHHHHHHH
Q 014892 28 REILFQGFNWESCKHDWWRNLERKVP-DISKSGFTSVWLPPAT-HSFA-PEGYLPQNLYSLNSSYGSEHLLKALLHKMKQ 104 (416)
Q Consensus 28 ~~~~~q~f~~~~~~~G~~~gi~~~Ld-yLk~LGv~~I~L~Pi~-~~~~-~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~ 104 (416)
++|+++.|..... .|+|+||+++|+ |||+| ||+||||||+ ++++ +|||+|.||++|+|+|||++||++||+
T Consensus 3 n~i~~~sf~d~~~-gg~~~~i~~~ld~yL~~L-v~~IwL~Pi~~~~~~~~~GY~~~dy~~idp~~Gt~~df~~Lv~---- 76 (504)
T 1r7a_A 3 NKVQLITYADRLG-DGTIKSMTDILRTRFDGV-YDGVHILPFFTPFDGADAGFDPIDHTKVDERLGSWDDVAELSK---- 76 (504)
T ss_dssp SSCEEEECSSSBS-SSSHHHHHHHHHHHSTTT-CCEEEECCCEECSSSSSTTSSCSEEEEECTTTCCHHHHHHHHT----
T ss_pred ccEeeeeeEeccC-CCCHHHHHHHHHHHHHHH-hCeEEECCcccCCCCCCCCCCccChhhcCcccCCHHHHHHHHh----
Confidence 5789999974422 789999999998 99999 9999999999 8886 999999999999999999999999996
Q ss_pred CCCEEEEEEccccCcCCCCCCC--------Ccccc-cCCCCCCCCCCc-eec----CC---C---------CCCCCCCCC
Q 014892 105 HKVRAMADIVINHRVGTTQGHG--------GKYNR-YDGIPLSWDEHA-VTS----CT---G---------GLGNGSTGD 158 (416)
Q Consensus 105 ~Gi~VilD~V~NH~~~~~~~~~--------~~~~~-f~~~~~~~~~~~-~~~----~~---~---------~~~~~~~~~ 158 (416)
||+||||+|+||++.+|+|+. +.|.. |..-...|.+.. ... +. . +.+.....+
T Consensus 77 -Gi~VilD~V~NH~s~~~~~f~~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 155 (504)
T 1r7a_A 77 -THNIMVDAIVNHMSWESKQFQDVLAKGEESEYYPMFLTMSSVFPNGATEEDLAGIYRPRPGLPFTHYKFAGKTRLVWVS 155 (504)
T ss_dssp -TSEEEEEEECSEEETTSHHHHHHHHHGGGSTTGGGBCBHHHHCTTCBCHHHHHTSCCSSSSCSEEEEEETTEEEEEECS
T ss_pred -CCEEEEEECCCcCCCcchHHHHHhhcCCCCccccceEeccccCcCCCCCcchhhhcCCCCCCCCCCceEcCCceEEECc
Confidence 999999999999999997653 22211 100000010000 000 00 0 000001122
Q ss_pred CCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCc----------H---HHHHHHHHhcC--CceEEEccc
Q 014892 159 NFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYS----------A---KYVKEYIEGAR--PIFSVGEYW 223 (416)
Q Consensus 159 ~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~----------~---~~~~~~~~~~~--~~~~vgE~~ 223 (416)
....+||||++||+||++|++++++|+ ++||||||||+|+++. + ++++++.+.++ +.+++||.|
T Consensus 156 f~~~~pdLn~~np~Vr~~i~~~~~~W~-~~gvDGfR~Da~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~igE~~ 234 (504)
T 1r7a_A 156 FTPQQVDIDTDSDKGWEYLMSIFDQMA-ASHVSYIRLDAVGYGAKEAGTSCFMTPKTFKLISRLREEGVKRGLEILIEVH 234 (504)
T ss_dssp SSTTEEEBCTTSHHHHHHHHHHHHHHH-HTTCCEEEEETGGGSCCCTTSCSSSCHHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred cCCCCCccCCCCHHHHHHHHHHHHHHH-HcCCCEEEEcccccccccCCCcccCchhHHHHHHHHHHHhCcCCcEEEEEec
Confidence 337789999999999999999999998 9999999999998763 2 34555655432 478999998
Q ss_pred CCCCCCCCCCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHh-cCchhhhhhhcCCCCCccccccCcceecccCC
Q 014892 224 DSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAV-KGQFWRLRDAQGKPPGVMGWWPSRAVTFLDNH 302 (416)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~fl~nH 302 (416)
.. | ...+ . ...+.+++|+|++...+..++ .+....+..... ..|...++|++||
T Consensus 235 ~~---------~-----~~~~-~---~~~~~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~-------~~p~~~~nfl~nH 289 (504)
T 1r7a_A 235 SY---------Y-----KKQV-E---IASKVDRVYDFALPPLLLHALSTGHVEPVAHWTD-------IRPNNAVTVLDTH 289 (504)
T ss_dssp SC---------H-----HHHH-H---HHTTSSEEEECSHHHHHHHHHHHCCCHHHHHHHH-------HSCSSEEECSCCS
T ss_pred cc---------c-----cccc-c---cCCccceEECchhhhhhhhhhhccchHHHHHHHH-------hCccccceecccC
Confidence 64 1 0111 1 123467899999876666665 333333322211 1245679999999
Q ss_pred CCCCCCCC--------------------------------------------------------CCCChhhHHHHHHHHh
Q 014892 303 DTGSTQAH--------------------------------------------------------WPFPSNHIMEGYAYIL 326 (416)
Q Consensus 303 D~~R~~~~--------------------------------------------------------~~~~~~~~~~a~a~ll 326 (416)
|+.|+... ++.+.+++++|++++|
T Consensus 290 D~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~n~d~~~~~~~~~~~~~~~~~~~~la~a~ll 369 (504)
T 1r7a_A 290 DGIGVIDIGSDQLDRSLKGLVPDEDVDNLVNTIHANTHGESQAATGAAASNLDLYQVNSTYYSALGCNDQHYIAARAVQF 369 (504)
T ss_dssp SCBCSTTTSCCSSCTTSCCSSCHHHHHHHHHHHHHHTTTHHHHHSGGGSBCSCSSSBCSCHHHHTTTCHHHHHHHHHHHH
T ss_pred CcccccccccccccccccccCCHHHHHHHHHHHhhccccccccccccccccCCccccccchhhhccCcHHHHHHHHHHHH
Confidence 99996521 1123357899999999
Q ss_pred cCCCeeEEecCCcCCCc------------------------------hhHHHHHHHHHHHHHhCcccCCCCeEEEEecCC
Q 014892 327 MHPGIPSVFYDHFYDWG------------------------------DSIHNQIVKLMDVRRQQDIHSRSSIKILEAQSN 376 (416)
Q Consensus 327 t~pGiP~Iy~G~E~gw~------------------------------~~l~~~~~~Li~lR~~~~~l~~G~~~~~~~~~~ 376 (416)
|+||+|+||||+|+|.. .++++++|+||+|||++|+| .|+++.+..+++
T Consensus 370 t~pG~P~iy~GdE~G~~~~~~~~~~~~~~r~~~r~~~~W~~~~~~~~~~~~~~~~~Li~lRk~~~al-~G~~~~~~~~~~ 448 (504)
T 1r7a_A 370 FLPGVPQVYYVGALAGKNDMELLRKTNNGRDINRHYYSTAEIDENLKRPVVKALNALAKFRNELDAF-DGTFSYTTDDDT 448 (504)
T ss_dssp HSSSEEEEEHHHHTTCCCCHHHHHHHCBGGGGGCCCBCHHHHHHHTTSHHHHHHHHHHHHHHHCGGG-GSEEEEEEETTT
T ss_pred hCCCceEEEeccccccCCCccccccccCCCCcccCCCChhHhhhhhhhHHHHHHHHHHHHHhhCccc-cCceEEecCCCC
Confidence 99999999999997631 24889999999999999999 999988777788
Q ss_pred EEEEEE---CCEEEEEEcCCC
Q 014892 377 LYSAII---GDKVCMKIGDGS 394 (416)
Q Consensus 377 ~~~~~R---~~~~lvvinn~~ 394 (416)
+++|.| +++++|++|.+.
T Consensus 449 v~af~R~~~~~~~lv~~N~~~ 469 (504)
T 1r7a_A 449 SISFTWRGETSQATLTFEPKR 469 (504)
T ss_dssp EEEEEEECSSCEEEEEECGGG
T ss_pred EEEEEEECCCeEEEEEEECCC
Confidence 999998 568899999864
|
| >1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-55 Score=461.91 Aligned_cols=351 Identities=13% Similarity=0.147 Sum_probs=247.8
Q ss_pred CceeEEEeeecCCCC------CCcHHHHHhhh-hhHHHcCCCEEEeCCCCCCCC--CCCcccccCCCCCCCCCCHHHHHH
Q 014892 27 GREILFQGFNWESCK------HDWWRNLERKV-PDISKSGFTSVWLPPATHSFA--PEGYLPQNLYSLNSSYGSEHLLKA 97 (416)
Q Consensus 27 ~~~~~~q~f~~~~~~------~G~~~gi~~~L-dyLk~LGv~~I~L~Pi~~~~~--~~GY~~~d~~~id~~~Gt~~d~~~ 97 (416)
.+.+|||++.+.++. -|||+||+++| ||||+||||+||||||++++. +|||+|.||++|+|+|||++|||+
T Consensus 130 ~~~~iYei~~~~f~~~~~~g~~g~~~~i~~~ll~yl~~lGv~~i~l~Pi~~~~~~~~~GY~~~~y~~~~~~~Gt~~~~~~ 209 (617)
T 1m7x_A 130 APISIYEVHLGSWRRHTDNNFWLSYRELADQLVPYAKWMGFTHLELLPINEHPFDGSWGYQPTGLYAPTRRFGTRDDFRY 209 (617)
T ss_dssp SCCEEEEECTTSSCBCTTTCCBCCHHHHHHHHHHHHHHTTCSEEEESCCEECSCGGGTTSSCSEEEEECGGGSCHHHHHH
T ss_pred CCcEEEEEEHHHhcCCCCCCCccCHHHHHHHHHHHHHHcCCCEEEecccccCCCCCCCCcccccCCccCccCCCHHHHHH
Confidence 467999999988753 25999999997 999999999999999999875 699999999999999999999999
Q ss_pred HHHHHHHCCCEEEEEEccccCcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHH
Q 014892 98 LLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDI 177 (416)
Q Consensus 98 Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l 177 (416)
||++||++||+||||+|+||++.+... +..|++......... ..+.. ..| +.++||++||+||++|
T Consensus 210 lv~~~H~~Gi~VilD~V~NH~~~~~~~----~~~~d~~~~y~~~~~----~~g~~-----~~w-~~~~ln~~~p~v~~~i 275 (617)
T 1m7x_A 210 FIDAAHAAGLNVILDWVPGHFPTDDFA----LAEFDGTNLYEHSDP----REGYH-----QDW-NTLIYNYGRREVSNFL 275 (617)
T ss_dssp HHHHHHHTTCEEEEEECTTSCCCSTTS----STTGGGSCSSBCC---------------------CCCBCTTSHHHHHHH
T ss_pred HHHHHHHCCCEEEEEEecCcccCccch----hhhcCCCccccccCc----ccCCc-----CCC-CCceecCCCHHHHHHH
Confidence 999999999999999999999764321 111222111000000 00100 011 2467999999999999
Q ss_pred HHHHHHHHHhcCCCeEEecccCCC------------------------cHHHHHHHHHhcC---C-ceEEEcccCCCCCC
Q 014892 178 IAWLRWLRNTVGFQDFRFDFARGY------------------------SAKYVKEYIEGAR---P-IFSVGEYWDSCNYN 229 (416)
Q Consensus 178 ~~~~~~w~~~~gvDGfRlD~a~~~------------------------~~~~~~~~~~~~~---~-~~~vgE~~~~~~~~ 229 (416)
++++++|++++||||||+|++++| ..+||+++++.++ | .+++||.|...+.
T Consensus 276 ~~~~~~W~~~~gvDGfR~D~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~fl~~~~~~v~~~~p~~~~iaE~~~~~~~- 354 (617)
T 1m7x_A 276 VGNALYWIERFGIDALRVDAVASMIYRDYSRKEGEWIPNEFGGRENLEAIEFLRNTNRILGEQVSGAVTMAEESTDFPG- 354 (617)
T ss_dssp HHHHHHHHHHSCCCEEEECCSHHHHCC--------------CTTCCHHHHHHHHHHHHHHHHSSTTCEEEECCSSCCTT-
T ss_pred HHHHHHHHHHhCcCEEEEcchhhhhhccccccccccccccccccCCchHHHHHHHHHHHHHHHCCCeEEEEeCCCCCcc-
Confidence 999999998899999999998764 2579999887764 4 7899998865210
Q ss_pred CCCCCCccchhhHhHhhhh-ccCCCcccccCchhhHHHHHHhcCch-hhh--hhhcCCCCCccccccCcceecccCCCCC
Q 014892 230 SHGLDYNQDSHRQRIINWI-DGTGQLSAAFDFTTKGILQEAVKGQF-WRL--RDAQGKPPGVMGWWPSRAVTFLDNHDTG 305 (416)
Q Consensus 230 ~~~~~~~~~~~~~~l~~~~-~~~~~~~~~fdf~~~~~l~~~~~~~~-~~~--~~~~~~~~~~~~~~p~~~~~fl~nHD~~ 305 (416)
+.... ..+.++++.+++.+...+...+.++. .+. ...+.. ... ........+++|||+.
T Consensus 355 --------------~~~~~~~~g~gfd~~~n~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~-~~~~~~fv~~~nHD~~ 417 (617)
T 1m7x_A 355 --------------VSRPQDMGGLGFWYKWNLGWMHDTLDYMKLDPVYRQYHHDKLTF--GIL-YNYTENFVLPLSHDEV 417 (617)
T ss_dssp --------------TTBCTTTTBSCCSEEECHHHHHHHHHHHHSCGGGGGGCTHHHHG--GGT-TTTTSCEEEEECGGGS
T ss_pred --------------ceeeccCCCCccCcEeCCchHHHHHHHhccCccchhhhhccchh--hhh-cccccceEEEeCCCCc
Confidence 01111 11124667777776655555553321 100 000000 000 0111122345999998
Q ss_pred CCC-----CCCCCC----hhhHHHHHHHHhcCCCeeEEecCCcCC------------Cc---------hhHHHHHHHHHH
Q 014892 306 STQ-----AHWPFP----SNHIMEGYAYILMHPGIPSVFYDHFYD------------WG---------DSIHNQIVKLMD 355 (416)
Q Consensus 306 R~~-----~~~~~~----~~~~~~a~a~llt~pGiP~Iy~G~E~g------------w~---------~~l~~~~~~Li~ 355 (416)
|.. +.+..+ ..++++|++++|++||+||||||+|+| |. .++++++|+|++
T Consensus 418 ~~g~~~~~~~~~g~~~~~~~~~r~a~~~~l~~pG~P~iy~G~E~G~~~~~~~~~~~~W~~~~~~~~~~~~l~~~~~~L~~ 497 (617)
T 1m7x_A 418 VHGKKSILDRMPGDAWQKFANLRAYYGWMWAFPGKKLLFMGNEFAQGREWNHDASLDWHLLEGGDNWHHGVQRLVRDLNL 497 (617)
T ss_dssp STTSCCHHHHSCSSHHHHHHHHHHHHHHHHHSSSEEEEETTTTTTCSSCCCTTSCCCGGGGCSSCCHHHHHHHHHHHHHH
T ss_pred ccCccchhhhCCCcHHHHHHHHHHHHHHHHHCCCCcEEEcchhcCCCCCCCcccccChhhccccchhhHHHHHHHHHHHH
Confidence 642 223322 257899999999999999999999986 22 368999999999
Q ss_pred HHHhCcccCCCCe-----EEEE---ecCCEEEEEE----CCEEEEEEcCCCCC--------CCCCCcEEeeeCC
Q 014892 356 VRRQQDIHSRSSI-----KILE---AQSNLYSAII----GDKVCMKIGDGSWC--------PAGKEWTLATSGH 409 (416)
Q Consensus 356 lR~~~~~l~~G~~-----~~~~---~~~~~~~~~R----~~~~lvvinn~~~~--------~~~~~~~~~ls~~ 409 (416)
||+++|+|+.|++ +.+. .++++++|.| +++++||+|.+... |.++.|++++++.
T Consensus 498 lR~~~~al~~g~~~~~~~~~~~~~~~~~~vlaf~R~~~~~~~~lvv~N~s~~~~~~~~i~~p~~g~~~~~l~sd 571 (617)
T 1m7x_A 498 TYRHHKAMHELDFDPYGFEWLVVDDKERSVLIFVRRDKEGNEIIVASNFTPVPRHDYRFGINQPGKWREILNTD 571 (617)
T ss_dssp HHTTCGGGTSCTTSGGGEEEEEEEETTTTEEEEEEECTTCCEEEEEEECSSCCEEEECCBCSSCSEEEEEEETT
T ss_pred HHhhCHHhhcCCCCCCCeEEEeccCCCCeEEEEEEEcCCCCEEEEEECCCCCCccceEECCCCCCeEEEEEeCc
Confidence 9999999998753 3443 3568999998 25789999986532 4456799888764
|
| >3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-56 Score=466.54 Aligned_cols=332 Identities=18% Similarity=0.165 Sum_probs=249.5
Q ss_pred CceeEEEeeecCCCCCCcHHHHHhhhhhHHHcCCCEEEeCCCCCCC--CCCCcccccCCCCCCCCCCHHHHHHHHHHHHH
Q 014892 27 GREILFQGFNWESCKHDWWRNLERKVPDISKSGFTSVWLPPATHSF--APEGYLPQNLYSLNSSYGSEHLLKALLHKMKQ 104 (416)
Q Consensus 27 ~~~~~~q~f~~~~~~~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~--~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~ 104 (416)
.+.+||+++.+.++..|||+||+++|||||+||||+||||||++++ ++|||+++|||+|+|+||+++|||+||++||+
T Consensus 135 ~~~~iYe~~v~~f~~~G~~~~~~~~L~yl~~lGv~~v~l~Pi~~~~~~~~~GY~~~~~~~~~~~~G~~~~~~~lv~~~H~ 214 (618)
T 3m07_A 135 EQAVVYEMHTGTFTPEGTFRAAIAKLPYLAELGVTVIEVMPVAQFGGERGWGYDGVLLYAPHSAYGTPDDFKAFIDAAHG 214 (618)
T ss_dssp GGCCEEEECHHHHSSSCSHHHHHTTHHHHHHHTCCEEEECCCEECSSSCCCSTTCCEEEEECTTTCCHHHHHHHHHHHHH
T ss_pred hhCeEEEEehhhcCCCCCHHHHHHHHHHHHHcCCCEEEeCChhccCCCCCCCcCcccccccCcCcCCHHHHHHHHHHHHH
Confidence 3579999999999889999999999999999999999999997654 68999999999999999999999999999999
Q ss_pred CCCEEEEEEccccCcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHH
Q 014892 105 HKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWL 184 (416)
Q Consensus 105 ~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w 184 (416)
+||+||||+|+||++.++++... +.+ .|... ... ....+++|+++|+||++|++++++|
T Consensus 215 ~Gi~VilD~V~NH~~~~~~~~~~----~~~---~~~~~---~~~-----------~~wg~~ln~~~p~V~~~i~~~~~~w 273 (618)
T 3m07_A 215 YGLSVVLDIVLNHFGPEGNYLPL----LAP---AFFHK---ERM-----------TPWGNGIAYDVDAVRRYIIEAPLYW 273 (618)
T ss_dssp TTCEEEEEECCSCCCSSSCCHHH----HCG---GGEEE---EEE-----------ETTEEEECTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeecCccCCCCcccccc----cCc---hhhcC---CCC-----------CCCCCCcCCCCHHHHHHHHHHHHHH
Confidence 99999999999999988764321 110 01000 000 0113579999999999999999999
Q ss_pred HHhcCCCeEEecccCCC----cHHHHHHHHHhcC------CceEEEcccCCCCC-CCCCCCCccchhhHhHhhhhccCCC
Q 014892 185 RNTVGFQDFRFDFARGY----SAKYVKEYIEGAR------PIFSVGEYWDSCNY-NSHGLDYNQDSHRQRIINWIDGTGQ 253 (416)
Q Consensus 185 ~~~~gvDGfRlD~a~~~----~~~~~~~~~~~~~------~~~~vgE~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~ 253 (416)
++++||||||||+++++ +.+||+++++.++ +.+++||.|...+. ..+. .. ...++
T Consensus 274 ~~~~gvDGfR~D~~~~~~~~~~~~f~~~l~~~v~~~~p~~~~~li~E~~~~~~~~l~~~-------------~~-g~~g~ 339 (618)
T 3m07_A 274 LTEYHLDGLRFDAIDQIEDSSARHVLVEIAQRIREDITDRPIHLTTEDSRNIISLHPRD-------------QD-GNAPL 339 (618)
T ss_dssp HHHTTCSEEEETTGGGCCCCSSSCHHHHHHHHHHHHCCSSCCEEEECCSSCCCTTSCCC-------------TT-SCCSS
T ss_pred HHHhCccEEEecchhhhcccchHHHHHHHHHHHHHhCCCCCEEEEEEecCCchhhhccc-------------cc-CCccc
Confidence 99999999999999999 8899999987763 27899999976321 0000 00 00012
Q ss_pred cccccCchhhHHHHHHhcCch------------hhhhhhcC----CCC----------C--ccccccCcceecccCCCC-
Q 014892 254 LSAAFDFTTKGILQEAVKGQF------------WRLRDAQG----KPP----------G--VMGWWPSRAVTFLDNHDT- 304 (416)
Q Consensus 254 ~~~~fdf~~~~~l~~~~~~~~------------~~~~~~~~----~~~----------~--~~~~~p~~~~~fl~nHD~- 304 (416)
+++.+++.++..+...+.|+. ..+...+. ... + .....|...++|++|||+
T Consensus 340 ~d~~~n~~~~~~l~~~~~g~~~~~~~~~~~~~~~~l~~~l~~~f~~~g~~s~~~~~~~G~~~~~~~~~~~v~fl~NHD~~ 419 (618)
T 3m07_A 340 FTAEWNDDFHNAVHVFATGETQAYYNDFADAPEKHLARALAEGFAYQGEISPQTGEPRGVKSTGQPPVAFVDFIQNHDQV 419 (618)
T ss_dssp CSEEECHHHHHHHHHHHHCCCSGGGGGGCSCHHHHHHHHHHHSCSCSSCBCTTTSSBCCCCCTTSCGGGEEECSCCHHHH
T ss_pred cceeechhHHHHHHHHhcCCccchhhhcccCcHHHHHHHHHHhhccCcccccccccccCCccccCChhhheeeecccccc
Confidence 556666666655554443321 01111110 000 0 001223478999999999
Q ss_pred ------CCCCCCCCCChhhHHHHHHHHhcCCCeeEEecCCcCCCc-----------------------------------
Q 014892 305 ------GSTQAHWPFPSNHIMEGYAYILMHPGIPSVFYDHFYDWG----------------------------------- 343 (416)
Q Consensus 305 ------~R~~~~~~~~~~~~~~a~a~llt~pGiP~Iy~G~E~gw~----------------------------------- 343 (416)
+|+.+.. +.+++++|++++||+||+|+||||+|+|..
T Consensus 420 gnr~~G~Rl~~~~--~~~~~~~a~alllt~PG~P~iy~G~E~G~~~pf~~f~d~~~~l~~~vr~gr~~e~~~f~~~~~~d 497 (618)
T 3m07_A 420 GNRAQGDRLITLA--GAERTKVLLATLLLSPHIPLLFMGEEYGESRPFLFFTDFHGDLARAVREGRAKEFADHAGENVPD 497 (618)
T ss_dssp HTSTTCCCHHHHH--CHHHHHHHHHHHHHSSSEEEEETTGGGTCCSCCCCCCCCCHHHHHHHHHHHHHTTGGGTTCCCCC
T ss_pred cccccccchhhhc--CHHHHHHHHHHHHhCCCcCEEecchhhCCCCCccccccCchhhhhhhhccchhhhccCCcccCCC
Confidence 6654433 356899999999999999999999997652
Q ss_pred ----------------------hhHHHHHHHHHHHHHhC--cccC---CCCeEEEEecCCEEEEEE---CCEEEEEEcCC
Q 014892 344 ----------------------DSIHNQIVKLMDVRRQQ--DIHS---RSSIKILEAQSNLYSAII---GDKVCMKIGDG 393 (416)
Q Consensus 344 ----------------------~~l~~~~~~Li~lR~~~--~~l~---~G~~~~~~~~~~~~~~~R---~~~~lvvinn~ 393 (416)
.+++++||+||+|||++ |+|+ .|.++.+..++++++|+| +++++|++|.+
T Consensus 498 P~~~~~~~~~~l~W~~~~~~~~~~ll~~~r~Li~lRr~~~~PaL~~~~~~~~~~~~~~~~vl~~~R~~~~~~llvv~Nls 577 (618)
T 3m07_A 498 PNAPETFQRSKLNWKQQHSEEGKAWLAFTRELLLLRQKHIVPLLSAARESSGTVLQTAPGFIAVSWRFPGGTLSLALNIS 577 (618)
T ss_dssp TTSHHHHHTTSCCHHHHHSHHHHHHHHHHHHHHHHHHHHTHHHHTTCCSCCEEEEEEETTEEEEEEEETTEEEEEEEECS
T ss_pred CCChhhcccccCChhhhcccccHHHHHHHHHHHHHHHhccCcccccCCCCceEEEecCCCEEEEEEEeCCCEEEEEEECC
Confidence 15899999999999999 8888 456777777889999988 45788888887
Q ss_pred CC
Q 014892 394 SW 395 (416)
Q Consensus 394 ~~ 395 (416)
..
T Consensus 578 ~~ 579 (618)
T 3m07_A 578 AT 579 (618)
T ss_dssp SS
T ss_pred CC
Confidence 64
|
| >1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-55 Score=467.57 Aligned_cols=366 Identities=17% Similarity=0.206 Sum_probs=255.1
Q ss_pred eccCceeEEEeeecCCCC---------CCcHHHHHhhhhhHHHcCCCEEEeCCCCCCC--------------CCCCcccc
Q 014892 24 IRNGREILFQGFNWESCK---------HDWWRNLERKVPDISKSGFTSVWLPPATHSF--------------APEGYLPQ 80 (416)
Q Consensus 24 ~~~~~~~~~q~f~~~~~~---------~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~--------------~~~GY~~~ 80 (416)
.+-.+.+|||++.+.++. .|+|+||+++|+|||+||||+||||||+++. ++|||+|.
T Consensus 174 ~~~~~~vIYe~hv~~f~~~~~~~~~~~~Gt~~gl~~~l~yLk~LGvt~V~L~Pi~~~~~~~~~~~~~~~g~~~~wGY~~~ 253 (750)
T 1bf2_A 174 RAQKDDVIYEVHVRGFTEQDTSIPAQYRGTYYGAGLKASYLASLGVTAVEFLPVQETQNDANDVVPNSDANQNYWGYMTE 253 (750)
T ss_dssp CCGGGCCEEEECHHHHHTTCTTSCGGGTTSHHHHHHTHHHHHHHTCCEEEESCCBCBSCTTTTSSTTCCTTCCCSCCCBS
T ss_pred CCccccEEEEEEhhHhhCcCCCCCccCCcCHHHHHHHHHHHHHcCCCEEEECCcccCccccccccccccccccccCcCcc
Confidence 334568999999986533 5899999999999999999999999999875 35899999
Q ss_pred cCCCCCCCCCC-------HHHHHHHHHHHHHCCCEEEEEEccccCcCCCCCCCCcccccCCCCCCCCC---CceecCCCC
Q 014892 81 NLYSLNSSYGS-------EHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDE---HAVTSCTGG 150 (416)
Q Consensus 81 d~~~id~~~Gt-------~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~~~~~~~~---~~~~~~~~~ 150 (416)
||++|+|+||| .+|||+||++||++||+||||+|+||++..+++....-..+ +...|.. ...+...+.
T Consensus 254 dy~~~~~~yGt~~~~~~~~~efk~lV~~~H~~Gi~VilDvV~NH~~~~~~~~~~d~~~~--p~~~~~~~d~~~~y~~~~~ 331 (750)
T 1bf2_A 254 NYFSPDRRYAYNKAAGGPTAEFQAMVQAFHNAGIKVYMDVVYNHTAEGGTWTSSDPTTA--TIYSWRGLDNATYYELTSG 331 (750)
T ss_dssp CSSCBCGGGCSCCSTTHHHHHHHHHHHHHHHTTCEEEEEECCSSCTTCSBSSSSCSSCB--BCSSHHHHHHHHHBCBCTT
T ss_pred cccccCccccCCCCCccHHHHHHHHHHHHHHCCCEEEEEEecccccCcccccccccccC--CCcccccCCCCcceEECCC
Confidence 99999999999 99999999999999999999999999999887642100000 0000100 000001110
Q ss_pred CCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcHH--------------------------
Q 014892 151 LGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAK-------------------------- 204 (416)
Q Consensus 151 ~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~~-------------------------- 204 (416)
.. ....+...+++||+++|+|+++|++++++|++++||||||||+|++++.+
T Consensus 332 ~~--~~~~~~g~~~~ln~~~p~V~~~i~d~l~~W~~e~gvDGfR~D~a~~l~~~f~~~~~~~~~~~~~~g~~~~~~~~~~ 409 (750)
T 1bf2_A 332 NQ--YFYDNTGIGANFNTYNTVAQNLIVDSLAYWANTMGVDGFRFDLASVLGNSCLNGAYTASAPNCPNGGYNFDAADSN 409 (750)
T ss_dssp SS--SBCCSSSSSCCBCTTSHHHHHHHHHHHHHHHHTSCCCEEEETTGGGGGBCCSSSSCCTTSTTCTTCSCCBCTTCTT
T ss_pred CC--ceecCCCcCCccccCCHHHHHHHHHHHHHHHHHcCCcEEEEechhhcCchhhhcccccccccccccccccccccch
Confidence 00 00111234589999999999999999999998899999999999887643
Q ss_pred --HHHHHHHh-c------CCceEEEcccCCCCCCCCCCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHhcC---
Q 014892 205 --YVKEYIEG-A------RPIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKG--- 272 (416)
Q Consensus 205 --~~~~~~~~-~------~~~~~vgE~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~~~--- 272 (416)
|++++.+. + ...++|||.|+..+.. +. +..| ....+.++..++..++.+..|
T Consensus 410 ~~~~~~i~~~~~~~~~~g~~~~liaE~w~~~~~~-----~~-------~~~F----~~~~~~wn~~~rd~l~~f~~g~~~ 473 (750)
T 1bf2_A 410 VAINRILREFTVRPAAGGSGLDLFAEPWAIGGNS-----YQ-------LGGF----PQGWSEWNGLFRDSLRQAQNELGS 473 (750)
T ss_dssp SHHHHHHHHSCBCCTTCCSSBEEEECCCCSSTTC-----CC-------TTCS----CTTCEEECHHHHHHHHHHHHCBTT
T ss_pred HHHHHHHHhCcchhhccCCCceEEeccccCCccc-----hh-------hccC----CccHHHHhHHHHHHHHHHhcCCCC
Confidence 66666654 2 2368999999753110 00 0000 011245666677777776655
Q ss_pred c---hhhhhhhcCCCCCcc---ccccCcceecccCCCCCCCCCCC-------------CC--------------------
Q 014892 273 Q---FWRLRDAQGKPPGVM---GWWPSRAVTFLDNHDTGSTQAHW-------------PF-------------------- 313 (416)
Q Consensus 273 ~---~~~~~~~~~~~~~~~---~~~p~~~~~fl~nHD~~R~~~~~-------------~~-------------------- 313 (416)
+ ...+...+.....++ +..|..++||++|||+.|+.... +.
T Consensus 474 ~~~~~~~l~~~l~~~~~~y~~~~~~p~~~vnfv~nHD~~~l~dl~s~~~~~n~~~~~~G~n~dG~~~n~s~n~g~~g~t~ 553 (750)
T 1bf2_A 474 MTIYVTQDANDFSGSSNLFQSSGRSPWNSINFIDVHDGMTLKDVYSCNGANNSQAWPYGPSDGGTSTNYSWDQGMSAGTG 553 (750)
T ss_dssp BCCCHHHHHHHHTTCHHHHGGGTCCGGGEEECSCCSSSCCHHHHTTCSSCCCCCCTTSCCCCCCCSCCCCCCTTTTTTSC
T ss_pred CCCCHHHHHHHhhcchhhhccCCCCcceEEEEeecCCCCcHHHHHhhhcccchhhhhccCCCCCccccccccccccCCch
Confidence 2 333433332211111 12456789999999998752100 00
Q ss_pred ----ChhhHHHHHHHHhcCCCeeEEecCCcCC--------------------Cc-----hhHHHHHHHHHHHHHhCcccC
Q 014892 314 ----PSNHIMEGYAYILMHPGIPSVFYDHFYD--------------------WG-----DSIHNQIVKLMDVRRQQDIHS 364 (416)
Q Consensus 314 ----~~~~~~~a~a~llt~pGiP~Iy~G~E~g--------------------w~-----~~l~~~~~~Li~lR~~~~~l~ 364 (416)
...+.++|++++|++||+||||||+|+| |+ .++++++++||+|||++|+|+
T Consensus 554 ~~~~r~~~~r~a~a~ll~~~G~P~i~~GdE~g~t~~G~~n~y~~~~~i~~~dW~~~~~~~~l~~~~~~Li~lRk~~pal~ 633 (750)
T 1bf2_A 554 AAVDQRRAARTGMAFEMLSAGTPLMQGGDEYLRTLQCNNNAYNLDSSANWLTYSWTTDQSNFYTFAQRLIAFRKAHPALR 633 (750)
T ss_dssp CHHHHHHHHHHHHHHHHHSSSEEEEETTGGGTCCCTTCSCCTTCCSTTTSCCCCCCHHHHHHHHHHHHHHHHHHHCGGGS
T ss_pred hhHHHHHHHHHHHHHHHHcCCcceeeechhhccCCCCCCCcccCCCcccccCCCccccchHHHHHHHHHHHHHhhChhhc
Confidence 0136899999999999999999999975 22 379999999999999999999
Q ss_pred CCCe------EEEE-------------ecCCEEEEEEC-------CEEEEEEcCCCCC-----CC---CCCcEEeeeCC
Q 014892 365 RSSI------KILE-------------AQSNLYSAIIG-------DKVCMKIGDGSWC-----PA---GKEWTLATSGH 409 (416)
Q Consensus 365 ~G~~------~~~~-------------~~~~~~~~~R~-------~~~lvvinn~~~~-----~~---~~~~~~~ls~~ 409 (416)
.+.+ ..+. .++++++|.|. +.++|++|.+... |. +..|+++++..
T Consensus 634 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~la~~r~~~~~~~~~~~~vv~N~~~~~~~~~lp~~~~g~~w~~~~~t~ 712 (750)
T 1bf2_A 634 PSSWYSGSQLTWYQPSGAVADSNYWNNTSNYAIAYAINGPSLGDSNSIYVAYNGWSSSVTFTLPAPPSGTQWYRVTDTC 712 (750)
T ss_dssp CSSCCCTTTEEEECTTSSBCCHHHHTCTTCCEEEEEECGGGGTCSSCEEEEEECSSSCEEEECCCCSSSSCEEEEEECS
T ss_pred CCcccccCcEEEecCCCCccCcccccCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCEEEECCCCCCCCcEEEEecCC
Confidence 9965 3322 13579999883 3688888885432 32 23698887754
|
| >1gjw_A Maltodextrin glycosyltransferase; alpha-amylase, maltosyltransferase; HET: MAL GLC; 2.1A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1gju_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-56 Score=466.31 Aligned_cols=341 Identities=13% Similarity=0.118 Sum_probs=248.0
Q ss_pred eccCceeEEEeeecCCC-------------------CCCcHHHHHhhhhhHHHcCCCEEEeCCCCCCCC-------CCCc
Q 014892 24 IRNGREILFQGFNWESC-------------------KHDWWRNLERKVPDISKSGFTSVWLPPATHSFA-------PEGY 77 (416)
Q Consensus 24 ~~~~~~~~~q~f~~~~~-------------------~~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~-------~~GY 77 (416)
.+-.+.+|||++.+.++ ..|||+|++++|+|||+||||+||||||++++. +|||
T Consensus 79 ~~~~~~~iYe~~~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~l~~l~~lG~~~v~l~Pi~~~~~~~~~g~~~~gY 158 (637)
T 1gjw_A 79 DWIKRSVVYGSLPRTTAAYNHKGSGYYEENDVLGFREAGTFFKMMLLLPFVKSLGADAIYLLPVSRMSDLFKKGDAPSPY 158 (637)
T ss_dssp GGGGGCCEEEECHHHHTCCCTTSSSCCCSBCTTSCBCSCCHHHHHHTHHHHHHHTCCEEEECCCEEECCSSCSSSSCCTT
T ss_pred CchhhCeEEEEeeccccCCCCCCCCccccccccchhccccHHHHHHHHHHHHHcCCCEEEeCCCeecccccccCCCCCcc
Confidence 34456899999986443 238999999999999999999999999998753 4599
Q ss_pred ccccCCCCCCCCCC--------HHHHHHHHHHHHHCCCEEEEEEccccCcCCCCCCCCcccccC---CCC-----CC---
Q 014892 78 LPQNLYSLNSSYGS--------EHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYD---GIP-----LS--- 138 (416)
Q Consensus 78 ~~~d~~~id~~~Gt--------~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~---~~~-----~~--- 138 (416)
+++||++++|+||+ .+|||+||++||++||+||||+|+||++.++++......+|. ... ..
T Consensus 159 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~lv~~~H~~Gi~VilD~V~nH~~~~~~~~~~~p~~f~~~~~~~~~~y~~p~~~ 238 (637)
T 1gjw_A 159 SVKNPMELDERYHDPLLEPFKVDEEFKAFVEACHILGIRVILDFIPRTAARDSDLIREHPDWFYWIKVEELADYTPPRAE 238 (637)
T ss_dssp SEEEEEEECGGGSCGGGTTSCHHHHHHHHHHHHHHTTCEEEEEECTTEEETTCGGGTTCGGGSCCEEGGGSTTCCCCCCT
T ss_pred CCCCcCCcCcccCCCcccccchHHHHHHHHHHHHHCCCEEEEEECcCCCcCcchhhhhCCceeEecccccccccCCcccc
Confidence 99999999999999 699999999999999999999999999998875332111110 000 00
Q ss_pred ---------------------------CCC-------C--------------------ce---ecCCCCCC----CCCCC
Q 014892 139 ---------------------------WDE-------H--------------------AV---TSCTGGLG----NGSTG 157 (416)
Q Consensus 139 ---------------------------~~~-------~--------------------~~---~~~~~~~~----~~~~~ 157 (416)
|.. . .+ ..+ ..|. .++..
T Consensus 239 ~l~~~~~~~~~~~~~Y~~~~~~~~~~~f~~~~~~~~p~~w~~~~~~~g~~~~~~~~~fg~~~~~~~-~dw~~~~~~~w~d 317 (637)
T 1gjw_A 239 ELPFKVPDEDELEIIYNKENVKRHLKKFTLPPNLIDPQKWEKIKREEGNILELIVKEFGIITPPGF-SDLINDPQPTWDD 317 (637)
T ss_dssp TSCSBCCCHHHHHHHHTSHHHHHHHTTBCCCHHHHCHHHHHHHHTCSSCHHHHHHHHHSEECCCBC-CSSBTCCSCCBTT
T ss_pred ccccCCcccccccccccChhhhhhhhhcccCccccChhhcccccccccchhhhhhhccccccCccc-ccccccCCCCccc
Confidence 000 0 00 000 0000 00000
Q ss_pred ----------------------CCC-------CCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcHHHHHH
Q 014892 158 ----------------------DNF-------HGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKE 208 (416)
Q Consensus 158 ----------------------~~~-------~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~~~~~~ 208 (416)
.++ ..++++|++||+||++|++++++|++++||||||||+|++++.+||++
T Consensus 318 ~~~l~~~~~~p~~~~~~~~~~~~dy~~f~~~~~~~~~ln~~np~V~~~l~d~~~~W~~e~gvDGfRlD~a~~l~~~f~~~ 397 (637)
T 1gjw_A 318 VTFLRLYLDHPEASKRFLDPNQPPYVLYDVIKASKFPGKEPNRELWEYLAGVIPHYQKKYGIDGARLDMGHALPKELLDL 397 (637)
T ss_dssp EEECCCBSSCCGGGGGGSCTTCCCCCCHHHHCTTTSCCSSBCHHHHHHHTTHHHHHHHHHCCCEEEESSGGGSCHHHHHH
T ss_pred ceeeecccCCchhhhhccccCCCcceecchhhhcccCcccCCHHHHHHHHHHHHHHhhhcCCceEEecchhhCCHHHHHH
Confidence 000 125567999999999999999999988999999999999999999999
Q ss_pred HHHhcC---C-ceEEEcccCCCCCCCCCCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHhcCchhhhhhhcCCC
Q 014892 209 YIEGAR---P-IFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKGQFWRLRDAQGKP 284 (416)
Q Consensus 209 ~~~~~~---~-~~~vgE~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~~~~~~~~~~~~~~~ 284 (416)
++++++ | .+++||.|.... . ..+.. +++++++++.+.... .+ ....++...+
T Consensus 398 ~~~~v~~~~p~~~ligE~~~~~~---------------~-~~~~~--~gfd~~~~~~~~~~~--~~-~~~~~~~~~l--- 453 (637)
T 1gjw_A 398 IIKNVKEYDPAFVMIAEELDMEK---------------D-KASKE--AGYDVILGSSWYFAG--RV-EEIGKLPDIA--- 453 (637)
T ss_dssp HHHHHHHHCTTCEEEECCCCGGG---------------H-HHHHH--HTCSEECCCHHHHHT--CT-TTGGGHHHHH---
T ss_pred HHHHHHHhCCCeEEEEeCCCCcc---------------h-hhHhh--cCCceEeccchhccc--cH-HHHHHHHHhh---
Confidence 988764 4 789999997420 0 12222 235666776543320 00 1122222211
Q ss_pred CCccccccCcceecccCCCCCCCCCCCCCChhhHHHHHHHHhcCC-CeeEEecCCcCC----------------------
Q 014892 285 PGVMGWWPSRAVTFLDNHDTGSTQAHWPFPSNHIMEGYAYILMHP-GIPSVFYDHFYD---------------------- 341 (416)
Q Consensus 285 ~~~~~~~p~~~~~fl~nHD~~R~~~~~~~~~~~~~~a~a~llt~p-GiP~Iy~G~E~g---------------------- 341 (416)
...+..+++|++|||++|+.+.+. ...+.++|+++++++| |+|+||||+|+|
T Consensus 454 ----~~~~~~~v~fl~nHD~~Rl~~~~~-~~~~~~~a~~l~l~~~~GiP~iy~GdE~G~~~p~~~g~~~d~~~R~~~~~~ 528 (637)
T 1gjw_A 454 ----EELVLPFLASVETPDTPRIATRKY-ASKMKKLAPFVTYFLPNSIPYVNTGQEIGEKQPMNLGLDTDPNLRKVLSPT 528 (637)
T ss_dssp ----HTCSSCEEECSCCTTSCCGGGSTT-HHHHHHHHHHHHHTSTTEEEEEETTGGGTCCSCSCCCSSCCGGGGGCSCTT
T ss_pred ----hccchHHhhcccCCCccccccccc-CcHHHHHHHHHHHHcCCCCcEEEeeeecCccCccccCCCCCcccccccccc
Confidence 124557899999999999988765 3356788889999998 999999999985
Q ss_pred ----------------C---chhHHHHHHHHHHHHHhCccc-CCCCeEEEEecCCEEEEEE---CCEEEEEEcCCCC
Q 014892 342 ----------------W---GDSIHNQIVKLMDVRRQQDIH-SRSSIKILEAQSNLYSAII---GDKVCMKIGDGSW 395 (416)
Q Consensus 342 ----------------w---~~~l~~~~~~Li~lR~~~~~l-~~G~~~~~~~~~~~~~~~R---~~~~lvvinn~~~ 395 (416)
| +.++++++|+||+|||++|+| +.|.++.+ .++++++|.| +++++||+|++..
T Consensus 529 Dp~~~~~~~~~~~~l~W~~~~~~l~~~~~~Li~lRk~~paL~~~g~~~~~-~~~~vlaf~R~~~~~~~lvv~N~~~~ 604 (637)
T 1gjw_A 529 DEFFGKLAFFDHYVLHWDSPDRGVLNFIKKLIKVRHEFLDFVLNGKFENL-TTKDLVMYSYEKNGQKIVIAANVGKE 604 (637)
T ss_dssp STTTTCCTTTSCCCCCTTSCCHHHHHHHHHHHHHHHHTHHHHHHSEEEEC-CCSSEEEEEEEETTEEEEEEEECSSS
T ss_pred CccccccccccccccchhhcChHHHHHHHHHHHHHhhChhhhhCCcEEEe-cCCCEEEEEEEcCCceEEEEEeCCCC
Confidence 1 146899999999999999999 88988854 4568999988 4578888998754
|
| >3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-56 Score=460.99 Aligned_cols=330 Identities=13% Similarity=0.083 Sum_probs=250.0
Q ss_pred CceeEEEeeecCCCCCCcHHHHHhhhhhHHHcCCCEEEeCCCCCCC--CCCCcccccCCCCCCCCCCHHHHHHHHHHHHH
Q 014892 27 GREILFQGFNWESCKHDWWRNLERKVPDISKSGFTSVWLPPATHSF--APEGYLPQNLYSLNSSYGSEHLLKALLHKMKQ 104 (416)
Q Consensus 27 ~~~~~~q~f~~~~~~~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~--~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~ 104 (416)
.+.+||+++.+.++.+|+|++|+++|||||+||||+||||||++++ .+|||++.|||+|+|+|||++|||+||++||+
T Consensus 100 ~~~~iYe~~~~~f~~~G~~~~~~~~l~~l~~lG~~~v~l~Pi~~~~~~~~~GY~~~~~~~~~~~~Gt~~d~~~lv~~~h~ 179 (558)
T 3vgf_A 100 EDLIIYEIHVGTFTPEGTFEGVIRKLDYLKDLGITAIEIMPIAQFPGKRDWGYDGVYLYAVQNSYGGPEGFRKLVDEAHK 179 (558)
T ss_dssp GGCCEEEECHHHHSSSCSHHHHHHTHHHHHHHTCCEEEECCCEECSSSCCCSTTCCEEEEECGGGTHHHHHHHHHHHHHH
T ss_pred cccEEEEEeHHHhCCCCCHHHHHHHHHHHHHcCCcEEEECCcccCCCCCCcCcccccccccccccCCHHHHHHHHHHHHH
Confidence 3579999999999999999999999999999999999999998866 47899999999999999999999999999999
Q ss_pred CCCEEEEEEccccCcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCC---CCCHHHHHHHHHHH
Q 014892 105 HKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNID---HTQHFVRKDIIAWL 181 (416)
Q Consensus 105 ~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln---~~~~~v~~~l~~~~ 181 (416)
+||+||||+|+||++.++++....- .|.. ..+...++ ..+| ..+|+||++|++++
T Consensus 180 ~Gi~VilD~V~NH~~~~~~~~~~~~--------~~~~---~~~~~~~g-----------~~~n~~~~~~~~v~~~l~~~~ 237 (558)
T 3vgf_A 180 KGLGVILDVVYNHVGPEGNYMVKLG--------PYFS---QKYKTPWG-----------LTFNFDDAESDEVRKFILENV 237 (558)
T ss_dssp TTCEEEEEECCSCCCSSSCCGGGTS--------CCEE---EEEEETTE-----------EEECSSSTTHHHHHHHHHHHH
T ss_pred cCCEEEEEEeeccccCCCCcccccC--------CccC---CCCCCCCC-----------CcccCCCCCCHHHHHHHHHHH
Confidence 9999999999999999876532110 0110 00011111 1123 35899999999999
Q ss_pred HHHHHhcCCCeEEecccCCC----cHHHHHHHHHhcCC--ceEEEcccCCCCCCCCCCCCccchhhHhHhhhhccCCCcc
Q 014892 182 RWLRNTVGFQDFRFDFARGY----SAKYVKEYIEGARP--IFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLS 255 (416)
Q Consensus 182 ~~w~~~~gvDGfRlD~a~~~----~~~~~~~~~~~~~~--~~~vgE~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 255 (416)
++|++++||||||+|+++++ +.+||+++++.++. .+++||.|...+ ..+..+...+.+++
T Consensus 238 ~~w~~~~gvDGfR~D~~~~~~~~~~~~f~~~l~~~~~~~~~~~iaE~~~~~~--------------~~~~~~~~~g~g~d 303 (558)
T 3vgf_A 238 EYWIKEYNVDGFRLSAVHAIIDTSPKHILEEIADVVHKYNRIVIAESDLNDP--------------RVVNPKEKCGYNID 303 (558)
T ss_dssp HHHHHHHCCCEEEESCGGGCCCCSSSCHHHHHHHHHHHTTCEEEEECSSCCG--------------GGTSCGGGTCCCCS
T ss_pred HHHHHHhCCCEEEEecccccccccHHHHHHHHHHHHhhcCEEEEEecCCCCc--------------ceeccccCCCCcee
Confidence 99999999999999999999 67899999887653 789999986531 11222222233577
Q ss_pred cccCchhhHHHHHHhcCch----------hhhhhhcCCCCCc----------------cccccCcceecccCCCC--CCC
Q 014892 256 AAFDFTTKGILQEAVKGQF----------WRLRDAQGKPPGV----------------MGWWPSRAVTFLDNHDT--GST 307 (416)
Q Consensus 256 ~~fdf~~~~~l~~~~~~~~----------~~~~~~~~~~~~~----------------~~~~p~~~~~fl~nHD~--~R~ 307 (416)
+.+++.++..+..++.+.. ..+...+...... ....|.+.++|++|||+ .|.
T Consensus 304 ~~~~~~~~~~l~~~~~~e~~~~~~d~~~~~~l~~~l~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~v~Fv~NHD~~gnr~ 383 (558)
T 3vgf_A 304 AQWVDDFHHSIHAYLTGERQGYYTDFGNLDDIVKSYKDVFVYDGKYSNFRRKTHGEPVGELDGCNFVVYIQNHDQVGNRG 383 (558)
T ss_dssp EEECHHHHHHHHHHHHCCCSGGGGGCCCHHHHHHHHHHSCSCSSEEETTTTEEECCCCTTCCGGGEEECSCCHHHHHTST
T ss_pred eEEcHHHHHHHHHHhcCCccccccccccHHHHHHHHHhhhccccccchhhhcccCCCcccCChHHheeeeeccchhcccc
Confidence 8888888888887764421 1222211100000 01245578999999998 665
Q ss_pred CCC-C--CCChhhHHHHHHHHhcCCCeeEEecCCcCCCc-----------------------------------------
Q 014892 308 QAH-W--PFPSNHIMEGYAYILMHPGIPSVFYDHFYDWG----------------------------------------- 343 (416)
Q Consensus 308 ~~~-~--~~~~~~~~~a~a~llt~pGiP~Iy~G~E~gw~----------------------------------------- 343 (416)
... . ..+.+++++|++++||+||+|+||||+|+|..
T Consensus 384 ~g~r~~~~~~~~~~~la~al~lt~pG~P~Iy~G~E~g~~~p~~~f~d~~d~~l~~~v~~Gr~~ef~~~~dp~~~~~f~~~ 463 (558)
T 3vgf_A 384 KGERIIKLVDRESYKIAAALYLLSPYIPMIFMGEEYGEENPFYFFSDFSDSKLIQGVREGRKKENGQDTDPQDESTFNAS 463 (558)
T ss_dssp TCCCGGGTSCHHHHHHHHHHHHTSSSEEEEETTGGGTCCSCCCCCCCCCSHHHHHHHHHHHHHHHCCCSCTTSHHHHHHT
T ss_pred ccccccccCCHHHHHHHHHHHHhCCCcceeecChhhcCCCCCcccccCCCHHHHHHHhhhhhccccCCCCCCchhhhhcc
Confidence 321 1 12566899999999999999999999998632
Q ss_pred -----h--hHHHHHHHHHHHHHhCcccCCCCeEE-EEecCCEEEEEECCEEEEEEcCCCC
Q 014892 344 -----D--SIHNQIVKLMDVRRQQDIHSRSSIKI-LEAQSNLYSAIIGDKVCMKIGDGSW 395 (416)
Q Consensus 344 -----~--~l~~~~~~Li~lR~~~~~l~~G~~~~-~~~~~~~~~~~R~~~~lvvinn~~~ 395 (416)
. +++++||+|++|||++| ..|..+. ...++.+++|.| ++++||+|.+..
T Consensus 464 ~~~w~~~~~l~~~~r~L~~lR~~~~--~~g~~~~~~~~~~~vla~~R-~~vlVv~N~s~~ 520 (558)
T 3vgf_A 464 KLSWKIDEEIFSFYKILIKMRKELS--IACDRRVNVVNGENWLIIKG-REYFSLYVFSKS 520 (558)
T ss_dssp SCCCCCCHHHHHHHHHHHHHHHHTT--CTTCCCCEEEECSSEEEEEC-SSCEEEEESSCE
T ss_pred CCChhHHHHHHHHHHHHHHHHhhCc--cCCCceeEEcCCCeEEEEEc-CeEEEEEECCCC
Confidence 1 58999999999999999 6666643 444578999999 889999999764
|
| >2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-54 Score=458.67 Aligned_cols=318 Identities=15% Similarity=0.236 Sum_probs=225.6
Q ss_pred cCceeEEEeeecCCCC---------CCcHHHHHhh--hhhHHHcCCCEEEeCCCCCCCC-----------CCCcccccCC
Q 014892 26 NGREILFQGFNWESCK---------HDWWRNLERK--VPDISKSGFTSVWLPPATHSFA-----------PEGYLPQNLY 83 (416)
Q Consensus 26 ~~~~~~~q~f~~~~~~---------~G~~~gi~~~--LdyLk~LGv~~I~L~Pi~~~~~-----------~~GY~~~d~~ 83 (416)
-.+.+|||++.+.++. .|||+||+++ |||||+||||+||||||++++. ||||+|.||+
T Consensus 171 ~~~~vIYeihv~~f~~~~~~~~~~~~Gt~~gi~~~~~l~yLk~LGvt~I~L~Pi~~~~~~~~~~~~g~~~~wGY~~~~y~ 250 (718)
T 2vr5_A 171 LKDTVIYEVHVKGFTKLRLDLPENIRGTYEGLASEQMISYLKDLGITTVELMPVFHFIDQRFLTDKGLTNYWGYDPINFF 250 (718)
T ss_dssp TTSCCEEEECTTTTTTTCTTSCTTSTTSHHHHTSHHHHHHHHHHTCCEEEECCCBCBCCCHHHHTTTCCCSSCCCBSCSS
T ss_pred hhHCEEEEEEcchhhcCCCCCCcccCcCHHHHhcchhhHHHHHcCCCeEEEeCCEecCccccccccCCcCccCcCcccCc
Confidence 3568999999988764 5899999999 9999999999999999999763 5899999999
Q ss_pred CCCCCCCC-------HHHHHHHHHHHHHCCCEEEEEEccccCcCCCCCCCC-cccccCCCC-CCCCCCceecCCCCCCCC
Q 014892 84 SLNSSYGS-------EHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGG-KYNRYDGIP-LSWDEHAVTSCTGGLGNG 154 (416)
Q Consensus 84 ~id~~~Gt-------~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~-~~~~f~~~~-~~~~~~~~~~~~~~~~~~ 154 (416)
+|+|+||| .+|||+||++||++||+||||+|+||++.++++... .+..+.... +.+.+.. ....
T Consensus 251 ~~~~~yGt~~~~~~~~~dfk~lv~~~H~~Gi~VilDvV~NH~~~~~~~~~~~~~~~~~~~~yy~~~~~~-----~~~~-- 323 (718)
T 2vr5_A 251 SPECRYSSTGCLGGQVLSFKKMVNELHNAGIEVIIDVVYNHTAEGNHLGPTLSFRGIDNTAYYMLQPDN-----KRYY-- 323 (718)
T ss_dssp SBCGGGCSSCTTTHHHHHHHHHHHHHHTTTCEEEEEECCSCCSSCSTTSCCSSHHHHHSTTTBCBCTTT-----SSSB--
T ss_pred ccChhhcCCCCCCchHHHHHHHHHHHHHCCCEEEEEeccCcccCccccCccccccCCCCCcceEeCCCC-----Ccee--
Confidence 99999999 799999999999999999999999999998875311 111111100 0111100 0000
Q ss_pred CCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcH---------HHHHHHHHh-cC-CceEEEccc
Q 014892 155 STGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSA---------KYVKEYIEG-AR-PIFSVGEYW 223 (416)
Q Consensus 155 ~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~---------~~~~~~~~~-~~-~~~~vgE~~ 223 (416)
......+++||++||+||++|++++++|++++||||||||+|++++. .+++++.+. +. +.+++||.|
T Consensus 324 --~~~~~~~~~ln~~~p~v~~~i~d~l~~W~~e~gvDGfR~D~~~~l~~~~~~~~~~~~~~~~i~~~~~~~~~~liaE~w 401 (718)
T 2vr5_A 324 --LDFTGTGNTLNLSHPRVIQMVLDSLRYWVTEMHVDGFRFDLAAALARELYSVNMLNTFFIALQQDPILSQVKLIAEPW 401 (718)
T ss_dssp --CCSSSSSCCBCTTSHHHHHHHHHHHHHHHHTTCCCEEEETTGGGGGBSSSSBCTTCHHHHHHHHCTTGGGSEEEECCB
T ss_pred --ecCCCccCeecCCCHHHHHHHHHHHHHHHHHcCCCEEEEcchhhhhhccCCccchHHHHHHHHhCcccCCcEEEeccc
Confidence 01123468999999999999999999999889999999999998765 356666553 22 378999999
Q ss_pred CCCCCCCCCCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHhcCc---hhhhhhhcCCCCCcc---ccccCccee
Q 014892 224 DSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKGQ---FWRLRDAQGKPPGVM---GWWPSRAVT 297 (416)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~~~~---~~~~~~~~~~~~~~~---~~~p~~~~~ 297 (416)
+..+.. |. +..| ....+.++..++..++.++.++ ..++...+......+ +..|..++|
T Consensus 402 ~~~~~~-----~~-------~~~f----~~~~~~wn~~~r~~~~~f~~g~~~~~~~~~~~l~~~~~~y~~~~~~p~~~vn 465 (718)
T 2vr5_A 402 DVGQGG-----YQ-------VGNF----PYQWAEWNGKYRDSIRRFWRGEALPYSEIANRLLGSPDIYLGNNKTPFASIN 465 (718)
T ss_dssp CSSTTC-----BC-------TTCS----CTTEEEECHHHHHHHHHHHHTCCEEHHHHHHHHTTCHHHHGGGTCCGGGEEE
T ss_pred ccCCCc-----cc-------ccCC----chhHHHHhHHHHHHHHHHHcCCcchHHHHHHHHhcchhhhcccCCCcceeee
Confidence 752100 00 0000 0011345555666666665443 223333222111111 123557899
Q ss_pred cccCCCCCCCCCC------------------------C-----CC--C-------hhhHHHHHHHHhcCCCeeEEecCCc
Q 014892 298 FLDNHDTGSTQAH------------------------W-----PF--P-------SNHIMEGYAYILMHPGIPSVFYDHF 339 (416)
Q Consensus 298 fl~nHD~~R~~~~------------------------~-----~~--~-------~~~~~~a~a~llt~pGiP~Iy~G~E 339 (416)
|++|||+.|+... + +. . .+++++|++++|++||+||||||+|
T Consensus 466 f~~~HD~~~l~dl~~~~~k~~~~~g~~~~dg~~~n~sw~~~~~g~~~~~~~~~~~~~~~r~a~a~ll~~~G~P~iy~GdE 545 (718)
T 2vr5_A 466 YVTSHDGFTLEDLVSYNQKHNEANGFNNQDGMNENYSWNCGAEGPTNDQNVVICREKQKRNFMITLLVSQGTPMILGGDE 545 (718)
T ss_dssp CSCCSSSCCHHHHSSCSSCCCGGGSSTTCCSCSCCCCCCSSSSSSCCCHHHHHHHHHHHHHHHHHHTTSSSEEEEETTTT
T ss_pred eeecCCCCCHHHHHHHhhhhhhhcccccccccccccccccccccCCCCHHHHHHHHHHHHHHHHHHHHcCCCcEEEechh
Confidence 9999999753110 0 00 0 2468899999999999999999999
Q ss_pred CC--------------------Cc-----hhHHHHHHHHHHHHHhCcccCCCCe
Q 014892 340 YD--------------------WG-----DSIHNQIVKLMDVRRQQDIHSRSSI 368 (416)
Q Consensus 340 ~g--------------------w~-----~~l~~~~~~Li~lR~~~~~l~~G~~ 368 (416)
+| |+ .+++++||+||+|||++|+|+.|.+
T Consensus 546 ~G~~~~G~~~~y~~~~~~~~~~W~~~~~~~~l~~~~~~Li~lRk~~pal~~~~~ 599 (718)
T 2vr5_A 546 LSRTQRGNNNAFCQDNEITWFDWNLDERKSKFLEFVKKMIQFYRAHPAFRRERY 599 (718)
T ss_dssp TTCCCTTCSCCTTCCSTTTSCCCCCCHHHHHHHHHHHHHHHHHHHCGGGSCSSC
T ss_pred hcccCCCCCCcccCCccccccCccccccchHHHHHHHHHHHHHhhCcccccCcc
Confidence 75 32 3799999999999999999998765
|
| >2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-55 Score=478.06 Aligned_cols=357 Identities=15% Similarity=0.222 Sum_probs=251.0
Q ss_pred cCceeEEEeeecCCC--------CCCcHHHHHhh-----------hhhHHHcCCCEEEeCCCCCCCC---------CCCc
Q 014892 26 NGREILFQGFNWESC--------KHDWWRNLERK-----------VPDISKSGFTSVWLPPATHSFA---------PEGY 77 (416)
Q Consensus 26 ~~~~~~~q~f~~~~~--------~~G~~~gi~~~-----------LdyLk~LGv~~I~L~Pi~~~~~---------~~GY 77 (416)
..+.+|||++.++++ ..|+|.|++++ |||||+||||+||||||+++++ +|||
T Consensus 430 ~~~~vIYEihv~~F~~~~~~g~~~~Gt~~g~~e~~~~~l~Gi~~~LdyLk~LGvtaI~L~Pi~e~~~~de~~~~~~~wGY 509 (921)
T 2wan_A 430 PVDEVIYEAHVRDFSIDANSGMKNKGKYLAFTEHGTKGPDHVKTGIDSLKELGITTVQLQPVEEFNSIDETQPDTYNWGY 509 (921)
T ss_dssp GGGCCEEEECHHHHHCSTTSCCSSTTSGGGGGCCSCBCGGGCBCHHHHHHHHTCCEEEESCCEEESSSCTTSTTSCCCCC
T ss_pred chhcEEEEEEcCcccCCCCCCCCCCCCeeheeccccccccccchhhHHHHHcCCCEEEeCCccccCcccccccCcCCcCC
Confidence 457999999998664 23777777665 9999999999999999999864 6999
Q ss_pred ccccCC------CCCCCCCC--HHHHHHHHHHHHHCCCEEEEEEccccCcCCC-CCCCCcccccCCCCCCCCCCceecCC
Q 014892 78 LPQNLY------SLNSSYGS--EHLLKALLHKMKQHKVRAMADIVINHRVGTT-QGHGGKYNRYDGIPLSWDEHAVTSCT 148 (416)
Q Consensus 78 ~~~d~~------~id~~~Gt--~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~-~~~~~~~~~f~~~~~~~~~~~~~~~~ 148 (416)
+|.||+ .++| +|+ ++|||+||++||++||+||||+|+||++.++ +++... . +..|.... .
T Consensus 510 d~~dy~ap~~~y~~dp-~Gt~~~~dfk~LV~~aH~~GI~VILDvV~NHt~~~~~~~f~~~----~--p~y~~~~~----~ 578 (921)
T 2wan_A 510 DPRNYNVPEGAYATTP-EGTARITELKQLIQSLHQQRIGVNMDVVYNHTFDVMVSDFDKI----V--PQYYYRTD----S 578 (921)
T ss_dssp SEEEEEEECGGGSSCS-STTHHHHHHHHHHHHHHHTTCEEEEEECTTCCSCSSSSHHHHH----S--TTTTBCBC----T
T ss_pred CCcCCCCCCcccccCC-CCCccHHHHHHHHHHHHHcCCEEEEEEccccccccccccccCC----C--CCeEEEcC----C
Confidence 999996 5556 666 7999999999999999999999999999987 332211 0 00011000 0
Q ss_pred CCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcHHHHHHHHHhcC---C-ceEEEcccC
Q 014892 149 GGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGAR---P-IFSVGEYWD 224 (416)
Q Consensus 149 ~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~~~~~~~~~~~~---~-~~~vgE~~~ 224 (416)
++..... ....++||++||+||++|++++++|++++||||||||+|++++.++|+++++.++ | .+++||.|+
T Consensus 579 ~g~~~~~----~g~~~dln~~~p~Vr~~i~d~l~~Wl~e~gVDGfR~Da~~~~~~~~~~~~~~~l~~~~p~~~ligE~w~ 654 (921)
T 2wan_A 579 NGNYTNG----SGCGNEFATEHPMAQKFVLDSVNYWVNEYHVDGFRFDLMALLGKDTMAKISNELHAINPGIVLYGEPWT 654 (921)
T ss_dssp TSCBCCT----TSSSCCBCTTSHHHHHHHHHHHHHHHHHHCCCEEEETTGGGGCHHHHHHHHHHHHHHCTTCEEEECSSC
T ss_pred CCcccCC----CCcccccccCCHHHHHHHHHHHHHHHHHcCCCEEEeccccccCHHHHHHHHHHHHHhCCceEEEEeccc
Confidence 1111111 1234799999999999999999999988999999999999999999999877653 4 789999997
Q ss_pred CC--CCCCCCCCCccchhhHhHhhhhccCCCc-ccccCchhhHHHHHH--------h-cCc---hhhhhhhcCCCCCccc
Q 014892 225 SC--NYNSHGLDYNQDSHRQRIINWIDGTGQL-SAAFDFTTKGILQEA--------V-KGQ---FWRLRDAQGKPPGVMG 289 (416)
Q Consensus 225 ~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~fdf~~~~~l~~~--------~-~~~---~~~~~~~~~~~~~~~~ 289 (416)
.. .+........ ...+++ .+.|++.++..++.. + .|. ...+...+......+.
T Consensus 655 ~~~~~~~~~~~~~~------------~~~~gf~~~~~nd~~rd~~~~~~f~~~~~~f~~g~~~~~~~l~~~l~~~~~~~~ 722 (921)
T 2wan_A 655 GGTSGLSSDQLVTK------------GQQKGLGIGVFNDNIRNGLDGNVFDKTAQGFATGDPNQVDVIKNGVIGSIQDFT 722 (921)
T ss_dssp SSCCSSCTTTSCCT------------TTTTTTTCEEECHHHHHHHHCCTTCTTCCCTTTTCSSCHHHHHHHHBTTTTTTC
T ss_pred CCCcccccchhccc------------cccCCCCeEEechHHHHHHhcccccccchhhhcCChhHHHHHHHHHhcchhhcc
Confidence 41 1211000000 000112 355666666555531 1 111 1122222211111122
Q ss_pred cccCcceecccCCCCCCCCCCC----CC-----ChhhHHHHHHHHhcCCCeeEEecCCcCC-------------------
Q 014892 290 WWPSRAVTFLDNHDTGSTQAHW----PF-----PSNHIMEGYAYILMHPGIPSVFYDHFYD------------------- 341 (416)
Q Consensus 290 ~~p~~~~~fl~nHD~~R~~~~~----~~-----~~~~~~~a~a~llt~pGiP~Iy~G~E~g------------------- 341 (416)
..|...++|++|||+.|+.+.+ .. ..+++++|++++|++||+||||||+|+|
T Consensus 723 ~~p~~~vnfv~nHD~~rl~d~l~~~~~~~~~~~~~~~~rla~a~llt~pG~P~iy~GdE~g~~~~g~~n~y~~~d~~~~~ 802 (921)
T 2wan_A 723 SAPSETINYVTSHDNMTLWDKILASNPSDTEADRIKMDELAHAVVFTSQGVPFMQGGEEMLRTKGGNDNSYNAGDSVNQF 802 (921)
T ss_dssp SSGGGEEECSCCSSSCCHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHSBSEEEEETTGGGTCCCTTCSCCTTCCHHHHSC
T ss_pred cCcceeEEeeeccCCccHHHHhhhhCCCCCHHHHHHHHHHHHHHHHHCCCCcEEEcchhhcccCCCCCcccCCccccccc
Confidence 3366789999999999875432 11 1247899999999999999999999975
Q ss_pred -Cc-----hhHHHHHHHHHHHHHhCcccCCCCe-------EEEEecCCEEEEEEC--------CEEEEEEcCCCCC----
Q 014892 342 -WG-----DSIHNQIVKLMDVRRQQDIHSRSSI-------KILEAQSNLYSAIIG--------DKVCMKIGDGSWC---- 396 (416)
Q Consensus 342 -w~-----~~l~~~~~~Li~lR~~~~~l~~G~~-------~~~~~~~~~~~~~R~--------~~~lvvinn~~~~---- 396 (416)
|. .++++++|+||+|||++|+|+.|.+ ..+..++++++|.|. ++++|++|.+...
T Consensus 803 ~W~~~~~~~~l~~~~~~Li~lRk~~paL~~g~~~~i~~~~~~~~~~~~vlaf~r~~~~~~~~~~~~lVv~N~~~~~~~~~ 882 (921)
T 2wan_A 803 DWSRKAQFKDVFDYFSSMIHLRNQHPAFRMTTADQIKQNLTFLESPTNTVAFELKNYANHDTWKNIIVMYNPNKTSQTLN 882 (921)
T ss_dssp CTHHHHHTHHHHHHHHHHHHHHHHCGGGGCCSHHHHHHHEEECCCCTTCEEEEECSSGGGCSSSCEEEEEECSSSCEEEE
T ss_pred CCcccccchHHHHHHHHHHHHHhhChhhhCCchhhhccceEEecCCCcEEEEEEecCCCCCCCCeEEEEEECCCCCEEEE
Confidence 32 3689999999999999999999975 344456789999982 3789999986532
Q ss_pred CCCCCcEEeeeCC
Q 014892 397 PAGKEWTLATSGH 409 (416)
Q Consensus 397 ~~~~~~~~~ls~~ 409 (416)
.+.+.|++++++.
T Consensus 883 Lp~g~w~~~~~~~ 895 (921)
T 2wan_A 883 LPSGDWTIVGLGD 895 (921)
T ss_dssp CCSSCEEEEEETT
T ss_pred CCCCcEEEEEcCC
Confidence 1235788877664
|
| >2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-55 Score=463.78 Aligned_cols=359 Identities=16% Similarity=0.200 Sum_probs=248.4
Q ss_pred eccCceeEEEeeecCCCC---------CCcHHHHHhh--hhhHHHcCCCEEEeCCCCCCCC-----------CCCccccc
Q 014892 24 IRNGREILFQGFNWESCK---------HDWWRNLERK--VPDISKSGFTSVWLPPATHSFA-----------PEGYLPQN 81 (416)
Q Consensus 24 ~~~~~~~~~q~f~~~~~~---------~G~~~gi~~~--LdyLk~LGv~~I~L~Pi~~~~~-----------~~GY~~~d 81 (416)
.+-.+.+|||++.+.++. .|||+||+++ |||||+||||+||||||++++. +|||+|.|
T Consensus 146 ~~~~~~vIYei~v~~F~~~~~~~~~~~~G~~~gi~~~~~l~yL~~LGvt~i~L~Pi~~~~~~~~~~~~g~~~~wGY~~~~ 225 (657)
T 2wsk_A 146 TPWGSTIIYEAHVKGLTYLHPEIPVEIRGTYKALGHPVMINYLKQLGITALELLPVAQFASEPRLQRMGLSNYWGYNPVA 225 (657)
T ss_dssp CCGGGCCEEEECHHHHHTTCTTSCGGGTTSHHHHTSHHHHHHHHHHTCCEEEESCCEEECCCHHHHTTTCCCSSCCCEEE
T ss_pred CCchhcEEEEEEcceeeccCCCCCccCCcCHHHHhcccchHHHHHcCCCEEEECCccccCccccccccccccccCcCccc
Confidence 344678999999986543 5899999999 9999999999999999998864 68999999
Q ss_pred CCCCCCCCC-----CHHHHHHHHHHHHHCCCEEEEEEccccCcCCCCCCCC-cccccCCCCCCCCCCceecCCCCCCCCC
Q 014892 82 LYSLNSSYG-----SEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGG-KYNRYDGIPLSWDEHAVTSCTGGLGNGS 155 (416)
Q Consensus 82 ~~~id~~~G-----t~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 155 (416)
|++|+|+|| +.+|||+||++||++||+||||+|+||++.++++... .+..+....+.+.+ .++..
T Consensus 226 y~~~~~~~G~~p~~~~~d~~~lv~~~H~~Gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~y~~~------~~~~~--- 296 (657)
T 2wsk_A 226 MFALHPAYACSPETALDEFRDAIKALHKAGIEVILDIVLNHSAELDLDGPLFSLRGIDNRSYYWIR------EDGDY--- 296 (657)
T ss_dssp EEEECGGGCSSGGGHHHHHHHHHHHHHHTTCEEEEEECCSCCTTCSTTSBCCSHHHHHHHHHBCBC------TTSSB---
T ss_pred CCCCCHHHcCCCCcCHHHHHHHHHHHHHCCCEEEEEEeecccccccccCccccccCCCCccceEEC------CCCCe---
Confidence 999999999 4799999999999999999999999999998875321 01000000000000 00100
Q ss_pred CCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcH--------HHHHHHHHh-cC-CceEEEcccCC
Q 014892 156 TGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSA--------KYVKEYIEG-AR-PIFSVGEYWDS 225 (416)
Q Consensus 156 ~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~--------~~~~~~~~~-~~-~~~~vgE~~~~ 225 (416)
..+...+++||++||+||++|++++++|++++||||||||+|++++. .+++++.+. +. +.+++||.|+.
T Consensus 297 -~~~~~~~~~ln~~~p~v~~~i~d~~~~W~~e~gvDGfR~D~~~~l~~~~~~~~~~~~~~~i~~~~~~~~~~liaE~w~~ 375 (657)
T 2wsk_A 297 -HNWTGCGNTLNLSHPAVVDYASACLRYWVETCHVDGFRFDLAAVMGRTPEFRQDAPLFTAIQNCPVLSQVKLIAEPWDI 375 (657)
T ss_dssp -CCSSSSSCCBCTTSHHHHHHHHHHHHHHHHTTCCCEEEETTTHHHHBSSSBCTTCHHHHHHHHCTTGGGSEEEECCBCS
T ss_pred -eCCCCcCCcccCCCHHHHHHHHHHHHHHHHHhCCcEEEEecccccccccccchhHHHHHHHHhCcccCCcEEEEccccC
Confidence 11123468999999999999999999999889999999999987643 467776553 22 37899999975
Q ss_pred CCCCCCCCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHhcCc---hhhhhhhcCCCCCcc---ccccCcceecc
Q 014892 226 CNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKGQ---FWRLRDAQGKPPGVM---GWWPSRAVTFL 299 (416)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~~~~---~~~~~~~~~~~~~~~---~~~p~~~~~fl 299 (416)
.+.. |. +..+ ......++..++..+...+.++ ..++...+......+ +..|..+++|+
T Consensus 376 ~~~~-----~~-------~~~f----~~~~~~~n~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~y~~~~~~~~~~~nf~ 439 (657)
T 2wsk_A 376 APGG-----YQ-------VGNF----PPLFAEWNDHFRDAARRFWLHYDLPLGAFAGRFAASSDVFKRNGRLPSAAINLV 439 (657)
T ss_dssp STTC-----BC-------TTCS----CTTEEEEEHHHHHHHHHHHHTSCSCHHHHHHHHBTTHHHHSSTTCCGGGEEECS
T ss_pred CCCc-----cc-------ccCC----CccHHHHhHHHHHHHHHHhccCCchHHHHHHHHhcchhhhccCCCCccceeehh
Confidence 2110 00 0000 0011233444555555554332 222222221110011 12345789999
Q ss_pred cCCCCCCCCCC-----------------------------CCC---------ChhhHHHHHHHHhcCCCeeEEecCCcCC
Q 014892 300 DNHDTGSTQAH-----------------------------WPF---------PSNHIMEGYAYILMHPGIPSVFYDHFYD 341 (416)
Q Consensus 300 ~nHD~~R~~~~-----------------------------~~~---------~~~~~~~a~a~llt~pGiP~Iy~G~E~g 341 (416)
+|||+.|+... .+. ..+++++|++++|++||+||||||||+|
T Consensus 440 ~~HD~~~l~dl~~~~~~~~~~~g~~~~~g~~~~~s~n~~~~g~~~~~~~~~~~~~~~r~~~a~ll~~~G~P~iy~GdE~G 519 (657)
T 2wsk_A 440 TAHDGFTLRDCVCFNHKHNEANGEENRDGTNNNYSNNHGKEGLGGSLDLVERRRDSIHALLTTLLLSQGTPMLLAGDEHG 519 (657)
T ss_dssp CCSSSCCHHHHTTCSSCCCGGGSSTTCSSCSCCCCCCTTSSSSCCCHHHHHHHHHHHHHHHHHHHHSBSEEEEETTTTTT
T ss_pred hcCCCCcHHHHHHHHhhhhhhccccccCCcccccccccccccCCCchhHHHHHHHHHHHHHHHHHHcccCCEEEechhhc
Confidence 99998653100 000 1235889999999999999999999975
Q ss_pred C--------------------c---hhHHHHHHHHHHHHHhCcccCCCCeE--------EEEec------------CCEE
Q 014892 342 W--------------------G---DSIHNQIVKLMDVRRQQDIHSRSSIK--------ILEAQ------------SNLY 378 (416)
Q Consensus 342 w--------------------~---~~l~~~~~~Li~lR~~~~~l~~G~~~--------~~~~~------------~~~~ 378 (416)
- + .+++++||+||+|||++|+|+.|++. .+..+ ++++
T Consensus 520 ~~~~g~~~~y~~d~~~~~~~W~~~~~~l~~~~~~Li~lRk~~pal~~g~~~~~~~~~v~~~~~~g~~~~~~~w~~~~~~l 599 (657)
T 2wsk_A 520 HSQHGNNNAYCQDNQLTWLDWSQASSGLTAFTAALIHLRKRIPALVENRWWEEGDGNVRWLNRYAQPLSTDEWQNGPKQL 599 (657)
T ss_dssp CCCTTCSCCTTCCSTTTSCCGGGCCHHHHHHHHHHHHHHTTCHHHHSCCCCCTTSSSEEEECTTSSBCCHHHHHHSCSEE
T ss_pred cccCCCCCccccCCccCccCcccccHHHHHHHHHHHHHHhhCcccccCcccccCCCceEEEcCCCcccccccccCCCceE
Confidence 3 2 36999999999999999999998764 23322 5699
Q ss_pred EEEECCEEEEEEcCCCCC----CCCCCcEE--eeeC
Q 014892 379 SAIIGDKVCMKIGDGSWC----PAGKEWTL--ATSG 408 (416)
Q Consensus 379 ~~~R~~~~lvvinn~~~~----~~~~~~~~--~ls~ 408 (416)
+|.|.++++|++|.+... .+.+.|++ ++++
T Consensus 600 a~~r~~~~lv~~N~s~~~~~~~lp~g~~~~~~l~~~ 635 (657)
T 2wsk_A 600 QILLSDRFLIAINATLEVTEIVLPAGEWHAIPPFAG 635 (657)
T ss_dssp EEEETTTEEEEEECSSSCEEEECCSSCCEECTTSSC
T ss_pred EEEEcCCEEEEEcCCCCceEEEcCCCceEEEEEecC
Confidence 999988899999997532 12246877 5544
|
| >2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-55 Score=436.65 Aligned_cols=293 Identities=14% Similarity=0.182 Sum_probs=224.6
Q ss_pred ccCceeEEEee-ecCCC--CCCcHHHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCHHHHHHHHHH
Q 014892 25 RNGREILFQGF-NWESC--KHDWWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHK 101 (416)
Q Consensus 25 ~~~~~~~~q~f-~~~~~--~~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~ 101 (416)
|-.+++|||++ .+++. ..|||+||+++|||||+||||+|||+||+++++ +||++.||++|+|+|||++||++||++
T Consensus 12 ww~~~viYqi~~~~sf~gdg~Gdl~gi~~~Ldyl~~LGv~~i~l~Pi~~~~~-~~y~~~dy~~idp~~Gt~~d~~~lv~~ 90 (424)
T 2dh2_A 12 WWHTGALYRIGDLQAFQGHGAGNLAGLKGRLDYLSSLKVKGLVLGPIHKNQK-DDVAQTDLLQIDPNFGSKEDFDSLLQS 90 (424)
T ss_dssp GGGSSCEEEECCHHHHHCTTCCSHHHHHTTHHHHHHTTCSEEEECCCEEECT-TCSTTEEEEEECGGGCCHHHHHHHHHH
T ss_pred ccccCeEEEEcCccccCCCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCC-CCCCcccccccCccCCCHHHHHHHHHH
Confidence 33458999998 76665 458999999999999999999999999999975 579999999999999999999999999
Q ss_pred HHHCCCEEEEEEccccCcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHH
Q 014892 102 MKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWL 181 (416)
Q Consensus 102 aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~ 181 (416)
||++||+||||+|+||+| .|+|+ . ..+|+||+++++++
T Consensus 91 ah~~Gi~vilD~V~NH~s-~~~wF-------~----------------------------------~q~~~Vr~~~~~~~ 128 (424)
T 2dh2_A 91 AKKKSIRVILDLTPNYRG-ENSWF-------S----------------------------------TQVDTVATKVKDAL 128 (424)
T ss_dssp HHHTTCEEEEECCTTTTS-SSTTC-------S----------------------------------SCHHHHHHHHHHHH
T ss_pred HHHCCCEEEEEECCCcCC-Ccccc-------c----------------------------------ccCHHHHHHHHHHH
Confidence 999999999999999999 55532 0 12489999999999
Q ss_pred HHHHHhcCCCeEEecccCCCcH--HHHHHHHHh---cCC--ceEEEcccCCCCCCCCCCCCccchhhHhHhhhhccCCCc
Q 014892 182 RWLRNTVGFQDFRFDFARGYSA--KYVKEYIEG---ARP--IFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQL 254 (416)
Q Consensus 182 ~~w~~~~gvDGfRlD~a~~~~~--~~~~~~~~~---~~~--~~~vgE~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 254 (416)
++|+ ++||||||+|++++++. +||+++.+. .++ .+++||.|.. ...+..+.... .
T Consensus 129 ~~Wl-~~gvDGfRlD~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~~~---------------~~~~~~~~~~~--~ 190 (424)
T 2dh2_A 129 EFWL-QAGVDGFQVRDIENLKDASSFLAEWQNITKGFSEDRLLIAGTNSSD---------------LQQILSLLESN--K 190 (424)
T ss_dssp HHHH-HHTCCEEEECCGGGSTTHHHHHHHHHHHHHHHCTTCEEEEECSCCC---------------HHHHHHHTTTC--T
T ss_pred HHHH-HcCCCEEEEeccccCCccHHHHHHHHHHHHHhCCCcEEEEEEecCC---------------HHHHHHHhccc--c
Confidence 9999 59999999999998875 488877654 334 4567887653 24444554432 3
Q ss_pred ccccCchhh-------HHHHHHhcCchhhhhhhcCCCCCccccccCcceecccCCCCCCCCCCCCCChhhHHHHHHHHhc
Q 014892 255 SAAFDFTTK-------GILQEAVKGQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFPSNHIMEGYAYILM 327 (416)
Q Consensus 255 ~~~fdf~~~-------~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~fl~nHD~~R~~~~~~~~~~~~~~a~a~llt 327 (416)
+.+|+|.+. ..+...+. +....... .....|+ |++|..+.+. +.++.++|++++||
T Consensus 191 ~~~~~f~~~~~~~~~~~~~~~~~~----~~~~~~~~---------~~~~~~~---d~~r~~s~~~-~~~~~k~~~~lllt 253 (424)
T 2dh2_A 191 DLLLTSSYLSDSGSTGEHTKSLVT----QYLNATGN---------RWCSWSL---SQARLLTSFL-PAQLLRLYQLMLFT 253 (424)
T ss_dssp TCEEECSTTTTCSSCHHHHHHHHH----HHHHHHTT---------CCCEECS---CSSCCGGGTS-CHHHHHHHHHHHTT
T ss_pred ccccchhhhcCCCCCHHHHHHHHH----HHHHhhcc---------Cceeeee---cCcchhhhcC-CHHHHHHHHHHHHH
Confidence 345555431 11111111 11111110 0112344 6678776665 45678999999999
Q ss_pred CCCeeEEecCCcCC-----------------Cc------------------------hhHHHHHHHHHHHHHhCcccCCC
Q 014892 328 HPGIPSVFYDHFYD-----------------WG------------------------DSIHNQIVKLMDVRRQQDIHSRS 366 (416)
Q Consensus 328 ~pGiP~Iy~G~E~g-----------------w~------------------------~~l~~~~~~Li~lR~~~~~l~~G 366 (416)
+||+|+||||+|+| |+ .+++++||+||+|||++|+|+.|
T Consensus 254 ~pG~P~iY~GeE~G~~~~~~~~~~~~r~~m~W~~~~~~~~w~~~~~~~nv~~q~~~~~s~~~~yr~Li~lRk~~~~l~~G 333 (424)
T 2dh2_A 254 LPGTPVFSYGDEIGLDAAALPGQPMEAPVMLWDESSFPDIPGAVSANMTVKGQSEDPGSLLSLFRRLSDQRSKERSLLHG 333 (424)
T ss_dssp SSSEEEEETTGGGTCCGGGSSSCCSSSCCCCSSTTSCTTSTTCCCGGGSHHHHHTCTTSHHHHHHHHHHHHHHCHHHHHC
T ss_pred CCCCeEEEeceecCCcCCCCCCCcccCCCCCCCccCCCCCCcccccccCHHhhhcCcHHHHHHHHHHHHHHhcChhhhcC
Confidence 99999999999975 32 25899999999999999999999
Q ss_pred CeEEEEecCCEEEEEE----CCEEEEEEcCCCC
Q 014892 367 SIKILEAQSNLYSAII----GDKVCMKIGDGSW 395 (416)
Q Consensus 367 ~~~~~~~~~~~~~~~R----~~~~lvvinn~~~ 395 (416)
+++.+..++++++|.| +++++|++|.+..
T Consensus 334 ~~~~~~~~~~v~a~~R~~~~~~~~lvv~N~s~~ 366 (424)
T 2dh2_A 334 DFHAFSAGPGLFSYIRHWDQNERFLVVLNFGDV 366 (424)
T ss_dssp EEEEEBCCTTEEEEEEECTTSCEEEEEEECSSS
T ss_pred ceEEEecCCCEEEEEEEcCCCCEEEEEEECCCC
Confidence 9999888889999988 2578888998653
|
| >3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-54 Score=451.40 Aligned_cols=350 Identities=17% Similarity=0.178 Sum_probs=252.8
Q ss_pred ceeEEEeeecCCCCCCcHHHHHhhh-hhHHHcCCCEEEeCCCCCCCC--CCCcccccCCCCCCCCCCHHHHHHHHHHHHH
Q 014892 28 REILFQGFNWESCKHDWWRNLERKV-PDISKSGFTSVWLPPATHSFA--PEGYLPQNLYSLNSSYGSEHLLKALLHKMKQ 104 (416)
Q Consensus 28 ~~~~~q~f~~~~~~~G~~~gi~~~L-dyLk~LGv~~I~L~Pi~~~~~--~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~ 104 (416)
..+||+++.+..+.+|+|++|+++| +|||+||||+||||||++++. +|||+|.||++|+|+|||++||++||++||+
T Consensus 245 ~~~IYE~h~~s~~~~G~~~~l~~~l~~yLk~lG~t~I~L~Pi~e~~~~~~wGY~~~~y~a~~~~yGt~~dfk~lV~~~H~ 324 (722)
T 3k1d_A 245 AMSTYEVHLGSWRPGLSYRQLARELTDYIVDQGFTHVELLPVAEHPFAGSWGYQVTSYYAPTSRFGTPDDFRALVDALHQ 324 (722)
T ss_dssp CCEEEEECTTTSSTTCCHHHHHHHHHHHHHHHTCSEEEESCCEECSCGGGTTCSCSEEEEECGGGCCHHHHHHHHHHHHH
T ss_pred CeEEEEEehhhccCCCCHHHHHHHHHHHHHHcCCCeEEECCcccCCCCCCCCCCcccCcCccccCCCHHHHHHHHHHHHH
Confidence 4689999999988889999999998 999999999999999999874 7899999999999999999999999999999
Q ss_pred CCCEEEEEEccccCcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHH
Q 014892 105 HKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWL 184 (416)
Q Consensus 105 ~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w 184 (416)
+||+||||+|+||++.+.... ..|.+.+.... .++.. .....| +.+++|+++|+||++|++++++|
T Consensus 325 ~GI~VilD~V~NH~~~~~~~~----~~fdg~~~y~~-------~d~~~--~~~~~W-g~~~ln~~~p~Vr~~l~~~~~~W 390 (722)
T 3k1d_A 325 AGIGVIVDWVPAHFPKDAWAL----GRFDGTPLYEH-------SDPKR--GEQLDW-GTYVFDFGRPEVRNFLVANALYW 390 (722)
T ss_dssp TTCEEEEEECTTCCCCCTTTT----TTTTSSCCSBC-------CCCCS--SSTTCC-CCCCBCTTSHHHHHHHHHHHHHH
T ss_pred cCCEEEEEEEeeccCCccchh----hcCCCCccccc-------CCccc--CccCCC-CCeeecCCCHHHHHHHHHHHHHH
Confidence 999999999999999864311 11222111111 01000 001112 34689999999999999999999
Q ss_pred HHhcCCCeEEecccCCC------------------------cHHHHHHHHHhcC---C-ceEEEcccCCCCCCCCCCCCc
Q 014892 185 RNTVGFQDFRFDFARGY------------------------SAKYVKEYIEGAR---P-IFSVGEYWDSCNYNSHGLDYN 236 (416)
Q Consensus 185 ~~~~gvDGfRlD~a~~~------------------------~~~~~~~~~~~~~---~-~~~vgE~~~~~~~~~~~~~~~ 236 (416)
++++||||||+|++++| +.+||+++++.++ | .+++||.|...+.
T Consensus 391 l~~~gvDGfR~Dav~~mly~d~~r~~g~w~~n~~gg~~n~~~~~fl~~l~~~v~~~~P~~~~iaE~~t~~p~-------- 462 (722)
T 3k1d_A 391 LQEFHIDGLRVDAVASMLYLDYSRPEGGWTPNVHGGRENLEAVQFLQEMNATAHKVAPGIVTIAEESTPWSG-------- 462 (722)
T ss_dssp HHHSCCCEEEECCTHHHHBCCCCCCSSCCSCCCSSCSBCHHHHHHHHHHHHHHHHHSTTCEEEECCCSSCCC--------
T ss_pred HHHhCCCEEEEcchhhhhhccccccccccccccCCCccChHHHHHHHHHHHHHHHhCCCeEEEEEecCCCcc--------
Confidence 98899999999998766 4689999987764 4 7899998764210
Q ss_pred cchhhHhHhhhhccCCCcccccCchhhHHHHHHhcCc-hhhhh--hhcCCCCCccccccCcceecccCCCCC-----CCC
Q 014892 237 QDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKGQ-FWRLR--DAQGKPPGVMGWWPSRAVTFLDNHDTG-----STQ 308 (416)
Q Consensus 237 ~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~~~~-~~~~~--~~~~~~~~~~~~~p~~~~~fl~nHD~~-----R~~ 308 (416)
........+.+++..+++.....+...+..+ ..+.. ..... ... +.....+++++|||+. |+.
T Consensus 463 ------v~~~~~~gGlGfd~~wn~~~~~d~l~y~~~~~~~r~~~~~~lt~--~~~-ya~~e~f~l~~sHD~~~~Gk~~ll 533 (722)
T 3k1d_A 463 ------VTRPTNIGGLGFSMKWNMGWMHDTLDYVSRDPVYRSYHHHEMTF--SML-YAFSENYVLPLSHDEVVHGKGTLW 533 (722)
T ss_dssp ------TTSCGGGTCCCCSEEECHHHHHHHHHHHHSCGGGGGGGHHHHHG--GGG-TTTSSCEEEEECGGGSSTTSCCHH
T ss_pred ------cccccccCCCccccccccchHHHHHHHHhcCchhhhhhhhccch--hhh-hhcccceecccCcchhccCccchh
Confidence 0001111122466667766655555554222 21110 00000 000 1112346778999998 555
Q ss_pred CCCCCC----hhhHHHHHHHHhcCCCeeEEecCCcCCC--------------------chhHHHHHHHHHHHHHhCcccC
Q 014892 309 AHWPFP----SNHIMEGYAYILMHPGIPSVFYDHFYDW--------------------GDSIHNQIVKLMDVRRQQDIHS 364 (416)
Q Consensus 309 ~~~~~~----~~~~~~a~a~llt~pGiP~Iy~G~E~gw--------------------~~~l~~~~~~Li~lR~~~~~l~ 364 (416)
+.+..+ ..++++++++||++||+|+||||+|+|- ...+.+++|+|++||+++|+|.
T Consensus 534 ~~~~gd~~~~~a~lr~~~a~~lt~PG~plif~G~E~G~~~e~~~~~~l~W~~~~~~~~~~~l~~~~~~Ln~lR~~~paL~ 613 (722)
T 3k1d_A 534 GRMPGNNHVKAAGLRSLLAYQWAHPGKQLLFMGQEFGQRAEWSEQRGLDWFQLDENGFSNGIQRLVRDINDIYRCHPALW 613 (722)
T ss_dssp HHSCSSHHHHHHHHHHHHHHHHHSSSEEEEETTGGGTCCSCCCTTTCCCGGGGGSSSSHHHHHHHHHHHHHHHHHCGGGT
T ss_pred hhCCCcHHHHHHHHHHHHHHHHhCCCeeEEecccccccccccccccccCcccccCccccHHHHHHHHHHHHHHHhChhhh
Confidence 555434 3468899999999999999999999852 2368999999999999999997
Q ss_pred CC-----CeEEEEe---cCCEEEEEE----CCEEEEEEcCCCCC--------CCCCCcEEeeeC
Q 014892 365 RS-----SIKILEA---QSNLYSAII----GDKVCMKIGDGSWC--------PAGKEWTLATSG 408 (416)
Q Consensus 365 ~G-----~~~~~~~---~~~~~~~~R----~~~~lvvinn~~~~--------~~~~~~~~~ls~ 408 (416)
.+ .++.+.. ++++++|.| ++.++||+|++... |..|.|+++++.
T Consensus 614 ~~d~~~~gf~wi~~~d~~~~viaf~R~~~~~~~llvv~N~s~~~~~~y~igvp~~G~~~eilns 677 (722)
T 3k1d_A 614 SLDTTPEGYSWIDANDSANNVLSFMRYGSDGSVLACVFNFAGAEHRDYRLGLPRAGRWREVLNT 677 (722)
T ss_dssp TTTTSGGGEEEEEEEETTTTEEEEEEECTTSCEEEEEEECSSSCEEEEEEEESSCEEEEEEEET
T ss_pred ccccCCCceEEEEccCCCCCEEEEEEEcCCCCEEEEEEeCCCCCceeEEeccCCCCEEEEEeeC
Confidence 54 4555543 468999988 24688888987542 445678888865
|
| >3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-54 Score=457.20 Aligned_cols=346 Identities=14% Similarity=0.146 Sum_probs=248.8
Q ss_pred cCceeEEEeeecCCCCC---CcHHHHHh-hhhhHHHcCCCEEEeCCCCCCC--CCCCcccccCCCCCCCCCCHHHHHHHH
Q 014892 26 NGREILFQGFNWESCKH---DWWRNLER-KVPDISKSGFTSVWLPPATHSF--APEGYLPQNLYSLNSSYGSEHLLKALL 99 (416)
Q Consensus 26 ~~~~~~~q~f~~~~~~~---G~~~gi~~-~LdyLk~LGv~~I~L~Pi~~~~--~~~GY~~~d~~~id~~~Gt~~d~~~Lv 99 (416)
+.+.+||+++.+.+..+ |+|+||++ +|||||+||||+||||||++++ ++|||+|+|||+|+|+|||++||++||
T Consensus 178 ~~~~~IYE~hv~~~~~~~~~Gt~~~l~~~~L~yLk~LGvt~I~L~Pi~e~~~~~~~GY~~~dy~a~~~~~Gt~~df~~lv 257 (755)
T 3aml_A 178 PDAPRIYEAHVGMSGEEPEVSTYREFADNVLPRIRANNYNTVQLMAIMEHSYYASFGYHVTNFFAVSSRSGTPEDLKYLV 257 (755)
T ss_dssp CSSCEEEEEESTTCSSSSSCCCHHHHHHHTHHHHHHTTCCEEEEESCEECSCGGGTTCSCSEEEEECGGGCCHHHHHHHH
T ss_pred CCCCEEEEEeeeccccCCCCCCHHHHHHHHHHHHHHcCCCEEEECchhcCCCCCCCCCccCCCCccCCCCCCHHHHHHHH
Confidence 35689999999876543 89999988 7999999999999999999987 689999999999999999999999999
Q ss_pred HHHHHCCCEEEEEEccccCcCCCCCCCCcccccC---CCCCC-CCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHH
Q 014892 100 HKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYD---GIPLS-WDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRK 175 (416)
Q Consensus 100 ~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~ 175 (416)
++||++||+||||+|+||++.++++. ...|+ +.... ++.. +++. ....+.++||++||+||+
T Consensus 258 ~~~H~~Gi~VilD~V~NH~~~~~~~g---~~~fd~~~~~~~~yf~~~-----~~g~------~~~w~~~~lN~~~p~V~~ 323 (755)
T 3aml_A 258 DKAHSLGLRVLMDVVHSHASNNVTDG---LNGYDVGQNTHESYFHTG-----DRGY------HKLWDSRLFNYANWEVLR 323 (755)
T ss_dssp HHHHHTTCEEEEEECCSCBCCCTTTS---GGGGCSSCCGGGSSBCCG-----GGGE------ETTTTEECBCTTSHHHHH
T ss_pred HHHHHCCCEEEEEEeccccccccccc---hhccccCCCCCcceeecC-----CCCc------cCCCCCceeccCCHHHHH
Confidence 99999999999999999999987532 11121 10001 1100 0010 011235789999999999
Q ss_pred HHHHHHHHHHHhcCCCeEEecccCCC--------------------------cHHHHHHHHHhc---CC-ceEEEcccCC
Q 014892 176 DIIAWLRWLRNTVGFQDFRFDFARGY--------------------------SAKYVKEYIEGA---RP-IFSVGEYWDS 225 (416)
Q Consensus 176 ~l~~~~~~w~~~~gvDGfRlD~a~~~--------------------------~~~~~~~~~~~~---~~-~~~vgE~~~~ 225 (416)
+|++++++|++++||||||||+|++| ..+||+++.+.+ .| .++|||.|.+
T Consensus 324 ~l~~~l~~Wl~e~gvDGfR~Dav~~m~~~~~g~~~~f~~~~~~~~~~~~~~~ai~fl~~~~~~v~~~~p~~~lIaE~~~~ 403 (755)
T 3aml_A 324 FLLSNLRYWMDEFMFDGFRFDGVTSMLYHHHGINKGFTGNYKEYFSLDTDVDAIVYMMLANHLMHKLLPEATIVAEDVSG 403 (755)
T ss_dssp HHHHHHHHHHHHHCCCEEEETTHHHHHBTTTTTTCCCCSCGGGTSSTTBCHHHHHHHHHHHHHHHHHCTTCEEEECCSSC
T ss_pred HHHHHHHHHHHHcCCCEEEecchhhhhhcccCcccccccccccccccccchhHHHHHHHHHHHHHHHCCCeEEEEEccCC
Confidence 99999999998899999999998643 125677765544 34 7899999865
Q ss_pred CCCCCCCCCCccchhhHhHhhhhccCCCcccccCch----hhHHHHHHhcC------chhhhhhhcCCCCCccccccCcc
Q 014892 226 CNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFT----TKGILQEAVKG------QFWRLRDAQGKPPGVMGWWPSRA 295 (416)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~----~~~~l~~~~~~------~~~~~~~~~~~~~~~~~~~p~~~ 295 (416)
.+. .+..+.. ++ ..||+. +...+.+.+.+ ....+...+.. ...|.+.
T Consensus 404 ~p~--------------~~~~~~~--gg--lgFd~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~l~~-----~~~~~~~ 460 (755)
T 3aml_A 404 MPV--------------LCRPVDE--GG--VGFDFRLAMAIPDRWIDYLKNKEDRKWSMSEIVQTLTN-----RRYTEKC 460 (755)
T ss_dssp CTT--------------TTSCGGG--TS--CCCSEEECTTHHHHHHHHHHHCCGGGCCHHHHHHHHHC-----SCTTSCE
T ss_pred Ccc--------------ceeeccC--CC--ccccccccccchHHHHHHHhhCCccccCHHHHHHHHHh-----ccCchhh
Confidence 321 0111111 11 234443 33344444422 11222222211 0245678
Q ss_pred eecccCCCCCCCCCCC-----------------CC-------ChhhHHHHHHHHhcCCCeeEE-ecCCcCCCc-------
Q 014892 296 VTFLDNHDTGSTQAHW-----------------PF-------PSNHIMEGYAYILMHPGIPSV-FYDHFYDWG------- 343 (416)
Q Consensus 296 ~~fl~nHD~~R~~~~~-----------------~~-------~~~~~~~a~a~llt~pGiP~I-y~G~E~gw~------- 343 (416)
++|++|||+.|..... .. ...+.++|+++++++||+|+| |||+|+|-.
T Consensus 461 vnf~~nHD~~r~g~~~~~f~l~d~~~~~~~~~l~~~~~~~~~~~~~~k~a~~~llt~pG~P~lly~G~E~G~~~~~~~p~ 540 (755)
T 3aml_A 461 IAYAESHDQSIVGDKTIAFLLMDKEMYTGMSDLQPASPTINRGIALQKMIHFITMALGGDGYLNFMGNEFGHPEWIDFPR 540 (755)
T ss_dssp EECSCCCCTTSCCCBCHHHHHHTTHHHHSCBSSSCCCHHHHHHHHHHHHHHHHHHHHHCSEEEEETTGGGTCCSBCCCCC
T ss_pred eehhhcCCccccccccccccccchhhhhhhhhccccchhhhhhHHHHHHHHHHHHHCCCCEEEEeCchhcCCcCcccCcc
Confidence 9999999999975421 00 124688999999999999987 999998631
Q ss_pred ------------------------hhHHHHHHHHHHHHHhCcccCCCCeEEE--EecCCEEEEEECCEEEEEEcCCCCC-
Q 014892 344 ------------------------DSIHNQIVKLMDVRRQQDIHSRSSIKIL--EAQSNLYSAIIGDKVCMKIGDGSWC- 396 (416)
Q Consensus 344 ------------------------~~l~~~~~~Li~lR~~~~~l~~G~~~~~--~~~~~~~~~~R~~~~lvvinn~~~~- 396 (416)
..+++++|+|++||+++|+|+.|..... ..++++++|.|. .++||+|++...
T Consensus 541 ~g~~~~~~~~r~~W~~~~~~~~~~~~l~~~~r~Li~lRk~~paL~~G~~~~~~~~~~~~vlaf~R~-~llVv~N~s~~~~ 619 (755)
T 3aml_A 541 EGNNWSYDKCRRQWSLVDTDHLRYKYMNAFDQAMNALEEEFSFLSSSKQIVSDMNEKDKVIVFERG-DLVFVFNFHPNKT 619 (755)
T ss_dssp GGGTTCCTTSSCCHHHHHCTTBSHHHHHHHHHHHHHHHHHHCGGGCCCEEEEEEETTTTEEEEEET-TEEEEEECCSSCC
T ss_pred cCCCCCcccccCCcccccCccchhHHHHHHHHHHHHHHHhChhhcCCCEEEEeecCCCcEEEEEEC-CEEEEEECCCCCc
Confidence 2488999999999999999999965433 335689999997 688999987541
Q ss_pred --------CCCCCcEEeeeCC
Q 014892 397 --------PAGKEWTLATSGH 409 (416)
Q Consensus 397 --------~~~~~~~~~ls~~ 409 (416)
|..+.|+++|+..
T Consensus 620 ~~~~~i~vp~~g~~~~vlnsd 640 (755)
T 3aml_A 620 YKGYKVGCDLPGKYRVALDSD 640 (755)
T ss_dssp EEEEEEEESSCSEEEEEEETT
T ss_pred cceeEECCCCCCeEEEEEeCC
Confidence 4457898888643
|
| >2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-54 Score=460.10 Aligned_cols=344 Identities=19% Similarity=0.288 Sum_probs=242.7
Q ss_pred CceeEEEeeecCCCCC-----------CcHHHHHhhhhhHHHcCCCEEEeCCCCCC-------------------CCC-C
Q 014892 27 GREILFQGFNWESCKH-----------DWWRNLERKVPDISKSGFTSVWLPPATHS-------------------FAP-E 75 (416)
Q Consensus 27 ~~~~~~q~f~~~~~~~-----------G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~-------------------~~~-~ 75 (416)
.+.+||+++.+.++.+ |||+||+++|||||+||||+||||||+++ .++ |
T Consensus 150 ~~~viYE~hv~~f~~~~~~~~~~~~~~Gt~~gi~~~L~yLk~LGvt~I~L~Pi~~~~~~~e~~~~~~~~~~~~~~~~~~w 229 (714)
T 2ya0_A 150 EDAVIYEAHVRDFTSDPAIAKDLTKPFGTFEAFIEKLDYLKDLGVTHIQLLPVLSYYFVNELKNHERLSDYASSNSNYNW 229 (714)
T ss_dssp GGCCEEEECHHHHHCCGGGTTTCSSCTTSHHHHHTTHHHHHHHTCSEEEESCCBCBSSCBGGGTTSCCCSCCSSSCSCCC
T ss_pred cccEEEEEEehhhccCCCCccccccCCcCHHHHHHHhHHHHHcCCCEEEECCcccccccCcccccccccccccCcCcCcc
Confidence 4689999998766432 99999999999999999999999999973 123 9
Q ss_pred CcccccCCCCCCCCCC--------HHHHHHHHHHHHHCCCEEEEEEccccCcCCCCCCC--CcccccCCCCCCCCCCcee
Q 014892 76 GYLPQNLYSLNSSYGS--------EHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHG--GKYNRYDGIPLSWDEHAVT 145 (416)
Q Consensus 76 GY~~~d~~~id~~~Gt--------~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~--~~~~~f~~~~~~~~~~~~~ 145 (416)
||+|.|||+++++||+ .+|||+||++||++||+||||+|+||++..++... +.|+.+. +
T Consensus 230 GY~~~~~~a~~~~yg~~~~~~~~~~~efk~lV~~~H~~Gi~VilDvV~NH~~~~~~~~~~~~~yy~~~-------~---- 298 (714)
T 2ya0_A 230 GYDPQNYFSLTGMYSSDPKNPEKRIAEFKNLINEIHKRGMGAILDVVYNHTAKVDLFEDLEPNYYHFM-------D---- 298 (714)
T ss_dssp SCSBSCSSSBCSTTSSCTTSTTHHHHHHHHHHHHHHHTTCEEEEEECTTBCSCHHHHHTTSTTTSBCB-------C----
T ss_pred CCCCccCcccChhhccCCCCccchHHHHHHHHHHHHHCCCEEEEEeccCcccCcccccccCCCeeEEe-------C----
Confidence 9999999999999998 79999999999999999999999999998653111 1111110 0
Q ss_pred cCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcHHHHHHHHHhc---CC-ceEEEc
Q 014892 146 SCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGA---RP-IFSVGE 221 (416)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~~~~~~~~~~~---~~-~~~vgE 221 (416)
.++... ..+ +.+++|+++|+||++|++++++|++++||||||||++++++.++|+++..++ +| .+++||
T Consensus 299 --~~g~~~----~~~-~~~~l~~~~~~v~~~i~d~l~~W~~e~~vDGfR~D~~~~~~~~~~~~~~~~~~~~~p~~~ligE 371 (714)
T 2ya0_A 299 --ADGTPR----TSF-GGGRLGTTHHMTKRLLIDSIKYLVDTYKVDGFRFDMMGDHDAASIEEAYKAARALNPNLIMLGE 371 (714)
T ss_dssp --TTCCBC----EET-TEEBBCTTSHHHHHHHHHHHHHHHHHHCCCEEEETTGGGSBHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred --CCCCCc----ccc-CCCCcccCCHHHHHHHHHHHHHHHHhhCceEEEEeCCCCCCHHHHHHHHHHHHHhCCCeEEEec
Confidence 011000 001 1357999999999999999999998899999999999999999999887665 35 789999
Q ss_pred ccCCCCCCCCCCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHh---------cC---chhhhhhhcCCCCCc-c
Q 014892 222 YWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAV---------KG---QFWRLRDAQGKPPGV-M 288 (416)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~---------~~---~~~~~~~~~~~~~~~-~ 288 (416)
.|+... +...+... .....|+... .....|+.+++..++..+ .| ....+...+...... .
T Consensus 372 ~w~~~~---g~~~~~~~---~~~~~~~~~~-~~~~~f~d~~r~~~~~~~~~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~ 444 (714)
T 2ya0_A 372 GWRTYA---GDENMPTK---AADQDWMKHT-DTVAVFSDDIRNNLKSGYPNEGQPAFITGGKRDVNTIFKNLIAQPTNFE 444 (714)
T ss_dssp CCSCCC---CSTTCCCC---BSSGGGGGGC-SSSEEECHHHHHHHHCCSSSTTCCCTTTTCCEEHHHHHHHHTTCCTTSC
T ss_pred cccccc---Cccccccc---ccchhHHhcC-CCccccchHHHHHHhccCCcccchhhhcCCcccHHHHHHHHhcCccccC
Confidence 997421 00000000 0011233221 123456666665555321 11 122333332221111 1
Q ss_pred ccccCcceecccCCCCCCCCCCC-------CCC-------hhhHHHHHHHHhcCCCeeEEecCCcCCCc-----------
Q 014892 289 GWWPSRAVTFLDNHDTGSTQAHW-------PFP-------SNHIMEGYAYILMHPGIPSVFYDHFYDWG----------- 343 (416)
Q Consensus 289 ~~~p~~~~~fl~nHD~~R~~~~~-------~~~-------~~~~~~a~a~llt~pGiP~Iy~G~E~gw~----------- 343 (416)
...|..+++|++|||+.|+.+.. ... .+++++|++++||+||+||||||||+|-.
T Consensus 445 ~~~p~~~vnfv~nHD~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~la~~lll~~~G~P~i~~GdE~g~~~~~~d~~~~~~ 524 (714)
T 2ya0_A 445 ADSPGDVIQYIAAHDNLTLFDIIAQSIKKDPSKAENYAEIHRRLRLGNLMVLTAQGTPFIHSGQEYGRTKQFRNPAYRTP 524 (714)
T ss_dssp CSSGGGEEECSCCSSSSCHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHSSSEEEEETTTTTTCCCBCCCGGGSSC
T ss_pred CCCHHHHhhHHHhCCCcchhhhhhhhcccCcccccchHHHHHHHHHHHHHHHHCCCCcEEEechhhcccCCCCCchhhhc
Confidence 23466889999999999864211 100 24788999999999999999999997521
Q ss_pred ------------------------------------------------------hhHHHHHHHHHHHHHhCcccCCCCeE
Q 014892 344 ------------------------------------------------------DSIHNQIVKLMDVRRQQDIHSRSSIK 369 (416)
Q Consensus 344 ------------------------------------------------------~~l~~~~~~Li~lR~~~~~l~~G~~~ 369 (416)
.++++++|+||+|||++|+|+.|++.
T Consensus 525 ~~~gr~~e~~~~~~~~~g~~f~~p~~~~d~~~~~~~~~~ldW~~~~~~~~~~~~~~l~~~~~~Li~lRk~~p~l~~g~~~ 604 (714)
T 2ya0_A 525 VAEDKVPNKSHLLRDKDGNPFDYPYFIHDSYDSSDAVNKFDWTKATDGKAYPENVKSRDYMKGLIALRQSTDAFRLKSLQ 604 (714)
T ss_dssp CCGGGCCTTEEEEECTTCCEEEEEEEESCCTTCCHHHHCCCHHHHHCTTTCHHHHHHHHHHHHHHHHHHTCGGGGCSSHH
T ss_pred cccccccchhhhhhhccccccccccccccccCCCCcceeccCCcccccccccchHHHHHHHHHHHHHHhhChhhcCCchh
Confidence 25889999999999999999999864
Q ss_pred EE-------E--------ecCCEEEEEE----CCEEEEEEcCCCC
Q 014892 370 IL-------E--------AQSNLYSAII----GDKVCMKIGDGSW 395 (416)
Q Consensus 370 ~~-------~--------~~~~~~~~~R----~~~~lvvinn~~~ 395 (416)
.+ . .++.+++|.| +++++|++|.+..
T Consensus 605 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~V~~N~~~~ 649 (714)
T 2ya0_A 605 DIKDRVHLITVPGQNGVEKEDVVIGYQITAPNGDIYAVFVNADEK 649 (714)
T ss_dssp HHHHHEEESSCTTSTTCCSEESEEEEEEECTTSCEEEEEEECSSS
T ss_pred hhcCceEEECCCCCCCCCCCCcEEEEEEeCCCCCEEEEEECCCCC
Confidence 32 1 1235899987 3578999998653
|
| >3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-53 Score=451.65 Aligned_cols=341 Identities=18% Similarity=0.280 Sum_probs=241.1
Q ss_pred cCceeEEEeeecCCCC-----------CCcHHHHHhhhhhHHHcCCCEEEeCCCCCC------------------CCC-C
Q 014892 26 NGREILFQGFNWESCK-----------HDWWRNLERKVPDISKSGFTSVWLPPATHS------------------FAP-E 75 (416)
Q Consensus 26 ~~~~~~~q~f~~~~~~-----------~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~------------------~~~-~ 75 (416)
..+.+||+++.+.++. .|+|+||+++|+|||+||||+||||||++. .++ |
T Consensus 265 ~~~~vIYElhvr~ft~~~~~~~~~~~~~Gt~~gl~~~L~yLk~LGvtaV~L~Pi~~~~~~~e~~~~~~~~~~~~~~~ynw 344 (877)
T 3faw_A 265 RQDAVIYEAHVRDFTSDQSLDGKLKNQLGTFAAFSEKLDYLQKLGVTHIQLLPVLSYFYVNEMDKSRSTAYTSSDNNYNW 344 (877)
T ss_dssp GGGCEEEEECTTGGGCCGGGTTTCSSCTTSHHHHGGGHHHHHHHTCSEEEESCCBCBSSCBTTCCCCCCSCCSSSCSCCC
T ss_pred ccccEEEEEEchHhcCCCCCCccccCCCCCHHHHHHHHHHHHHcCCCEEEEcchhcccccccccccccccccCCCCCCcc
Confidence 3468999999997753 299999999999999999999999999973 123 9
Q ss_pred CcccccCCCCCCCCCC--------HHHHHHHHHHHHHCCCEEEEEEccccCcCCCCCCC--CcccccCCCCCCCCCCcee
Q 014892 76 GYLPQNLYSLNSSYGS--------EHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHG--GKYNRYDGIPLSWDEHAVT 145 (416)
Q Consensus 76 GY~~~d~~~id~~~Gt--------~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~--~~~~~f~~~~~~~~~~~~~ 145 (416)
||+|.||++++++||+ .+|||+||++||++||+||||+|+||++.++++.. +.|+. |..
T Consensus 345 GY~~~~~~a~~~~yGt~p~~~~~~~~efk~lV~~~H~~GI~VILDvV~NH~a~~~~~~~~~p~yy~-------~~~---- 413 (877)
T 3faw_A 345 GYDPQSYFALSGMYSEKPKDPSARIAELKQLIHDIHKRGMGVILDVVYNHTAKTYLFEDIEPNYYH-------FMN---- 413 (877)
T ss_dssp SCSBSCSSSBCSTTCSCTTSTTHHHHHHHHHHHHHHHTTCEEEEEECTTCCSCTHHHHTTSTTTSB-------CBC----
T ss_pred CcCcCccccccccccCCCCCcchHHHHHHHHHHHHHHcCCEEEEEEeeccccCccccccCCCceee-------eeC----
Confidence 9999999999999999 69999999999999999999999999999765321 11111 100
Q ss_pred cCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcHHHHHHHHHhcC---C-ceEEEc
Q 014892 146 SCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGAR---P-IFSVGE 221 (416)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~~~~~~~~~~~~---~-~~~vgE 221 (416)
.++... . ..+.+++|+++|+||++|++++++|++++||||||||++++++.++|++++.+++ | .+++||
T Consensus 414 --~dg~~~----~-~~~g~~ln~~~p~Vr~~i~d~l~~Wv~e~gVDGFRfD~a~~~~~~~~~~~~~~~~~~~P~~~ligE 486 (877)
T 3faw_A 414 --EDGSPR----E-SFGGGRLGTTHAMSRRVLVDSIKYLTSEFKVDGFRFDMMGDHDAAAIELAYKEAKAINPNMIMIGE 486 (877)
T ss_dssp --TTSCBC----E-ETTEECBCTTSHHHHHHHHHHHHHHHHHHCCCEEEETTGGGSBHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred --CCCCee----c-cCCCcccccCCHHHHHHHHHHHHHHHHHcCCcEEEEecCCcCCHHHHHHHHHHHHhhCCCcEEEEc
Confidence 011100 0 1124689999999999999999999988999999999999999999999887764 5 789999
Q ss_pred ccCCCCCCCCCCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHhcCc----------------hhhhhhhcCCCC
Q 014892 222 YWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKGQ----------------FWRLRDAQGKPP 285 (416)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~~~~----------------~~~~~~~~~~~~ 285 (416)
.|+......+...... .+ .|.... .....| ...+++++.|. ..++...+....
T Consensus 487 ~Wd~~~g~~~~~~~~~---~~---~~~~~~-~~i~~f----~d~iR~~~rg~~~~~~~~gf~~g~~~~l~~~~~~l~~~~ 555 (877)
T 3faw_A 487 GWRTFQGDQGKPVKPA---DQ---DWMKST-DTVGVF----SDDIRNSLKSGFPNEGTPAFITGGPQSLQGIFKNIKAQP 555 (877)
T ss_dssp CCSCCCCBTTBCCCBS---SG---GGGGGC-SSEEEE----CHHHHHHHHCCTTCTTCCCGGGTCCEEHHHHHHHHTTCC
T ss_pred cccccccccccccccc---ch---hhhhcC-Cccchh----hHHHHHHHccccccccchhhhcCCcHHHHHHHHHhhcCc
Confidence 9985211000000000 00 000000 001112 33334433221 223333332221
Q ss_pred Ccc-ccccCcceecccCCCCCCCCCCCCC----C--------hhhHHHHHHHHhcCCCeeEEecCCcCCCc---------
Q 014892 286 GVM-GWWPSRAVTFLDNHDTGSTQAHWPF----P--------SNHIMEGYAYILMHPGIPSVFYDHFYDWG--------- 343 (416)
Q Consensus 286 ~~~-~~~p~~~~~fl~nHD~~R~~~~~~~----~--------~~~~~~a~a~llt~pGiP~Iy~G~E~gw~--------- 343 (416)
..+ ...|..+++|++|||+.|+...+.. + .++.++|++++|++||+||||+|||++-.
T Consensus 556 ~~~~~~~P~~sVnFV~nHD~~tl~Dlls~~~k~n~~~~~~~~~~r~~lA~alllls~GiP~i~~GdE~grs~~gnnn~Yc 635 (877)
T 3faw_A 556 GNFEADSPGDVVQYIAAHDNLTLHDVIAKSINKDPKVAEEDIHRRLRLGNVMILTSQGTAFIHSGQEYGRTKRLLNPDYM 635 (877)
T ss_dssp SSSCCSSGGGEEECSCCSSSSCHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTSSSEEEEETTTTTTCCCBCCCGGGS
T ss_pred cccccCCccceeeeeecccchhHHhhhhhhhcCCcccCHHHHHHHHHHHHHHHHhcCCccccccchhhhcccCCCccccc
Confidence 211 2357789999999999986543210 1 24788999999999999999999998510
Q ss_pred ----------------------------------------------------hhHHHHHHHHHHHHHhCcccCCCCe---
Q 014892 344 ----------------------------------------------------DSIHNQIVKLMDVRRQQDIHSRSSI--- 368 (416)
Q Consensus 344 ----------------------------------------------------~~l~~~~~~Li~lR~~~~~l~~G~~--- 368 (416)
.++++++|+||+|||++|+|+.+++
T Consensus 636 q~~~~D~~p~k~~~~d~p~~~~~f~~nsy~s~d~in~~DW~~~~~~~~~~~~~~l~~~~k~Li~lRk~~palr~~~~~~i 715 (877)
T 3faw_A 636 TKVSDDKLPNKATLIEAVKEYPYFIHDSYDSSDAINHFDWAAATDNNKHPISTKTQAYTAGLITLRRSTDAFRKLSKAEI 715 (877)
T ss_dssp SCCCGGGCCTTEEECTTCSSSCEEESCCTTCCHHHHSCCHHHHHCTTTCHHHHHHHHHHHHHHHHHHHCGGGSCSCHHHH
T ss_pred cccccccccccccccccccccccccccccCCcccccccccccccccccccccHHHHHHHHHHHHHHhhChhhhCCchHhh
Confidence 2488999999999999999999854
Q ss_pred ----EEEEe--------cCCEEEEEE----CCEEEEEEcCCCC
Q 014892 369 ----KILEA--------QSNLYSAII----GDKVCMKIGDGSW 395 (416)
Q Consensus 369 ----~~~~~--------~~~~~~~~R----~~~~lvvinn~~~ 395 (416)
.++.. ++.+++|.+ ++.++|++|.+..
T Consensus 716 ~~~v~~~~~~~~~~~~~~~~vlay~~~~~~~~~~lVv~N~~~~ 758 (877)
T 3faw_A 716 DREVSLITEVGQGDIKEKDLVIAYQTIDSKGDIYAVFVNADSK 758 (877)
T ss_dssp HHHCEESSCTTSTTCCSEESEEEEEEECTTCCEEEEEEECSSS
T ss_pred cCceEEEcCCCCCCcCcCCCEEEEEEECCCCCEEEEEEeCCCC
Confidence 33332 246999976 3578888888653
|
| >2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-52 Score=454.48 Aligned_cols=344 Identities=19% Similarity=0.294 Sum_probs=240.2
Q ss_pred CceeEEEeeecCCCC-----------CCcHHHHHhhhhhHHHcCCCEEEeCCCCCC-------------------CC-CC
Q 014892 27 GREILFQGFNWESCK-----------HDWWRNLERKVPDISKSGFTSVWLPPATHS-------------------FA-PE 75 (416)
Q Consensus 27 ~~~~~~q~f~~~~~~-----------~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~-------------------~~-~~ 75 (416)
.+.+||+++.+.++. .|+|+||+++|||||+||||+||||||+++ .+ .|
T Consensus 457 ~~~vIYE~hv~~ft~~~~~~~~~~~~~Gt~~gl~~~LdyLk~LGvtaV~L~Pv~~~~~~~e~~~~~~~~~y~~~~~~ynw 536 (1014)
T 2ya1_A 457 EDAVIYEAHVRDFTSDPAIAKDLTKPFGTFEAFIEKLDYLKDLGVTHIQLLPVLSYYFVNELKNHERLSDYASSNSNYNW 536 (1014)
T ss_dssp GGCCEEEECHHHHHCCGGGTTTCSSCTTSHHHHHTTHHHHHHHTCSEEEESCCBCBSSCBGGGTTSCCCSCCSSSCSCCC
T ss_pred cccEEEEEecCCCCCCCCccccccCCCcCHHHHHHHhHHHHHcCCCeEEecCcccccccccccccccccccccCcCCccc
Confidence 467999999876543 299999999999999999999999999973 12 39
Q ss_pred CcccccCCCCCCCCCC--------HHHHHHHHHHHHHCCCEEEEEEccccCcCCCCCCC--CcccccCCCCCCCCCCcee
Q 014892 76 GYLPQNLYSLNSSYGS--------EHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHG--GKYNRYDGIPLSWDEHAVT 145 (416)
Q Consensus 76 GY~~~d~~~id~~~Gt--------~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~--~~~~~f~~~~~~~~~~~~~ 145 (416)
||+|.+||+++++||+ .+|||+||++||++||+||||+|+||++..+++.. +.|+.+. .
T Consensus 537 GY~~~~y~a~~~~ygt~p~~~~~~~~efk~lV~~~H~~GI~VIlDvV~NHt~~~~~~~~~~~~yy~~~-------~---- 605 (1014)
T 2ya1_A 537 GYDPQNYFSLTGMYSSDPKNPEKRIAEFKNLINEIHKRGMGAILDVVYNHTAKVDLFEDLEPNYYHFM-------D---- 605 (1014)
T ss_dssp SCSBSCSSSBCSTTCSCTTCTTHHHHHHHHHHHHHHTTTCEEEEEECTTCCSCHHHHHTTSTTTSBCB-------C----
T ss_pred CCCcCcCccccccccCCCccccchHHHHHHHHHHHHHcCCEEEEEEeccccccccccccCCCCeeEEe-------C----
Confidence 9999999999999998 69999999999999999999999999998653111 1111110 0
Q ss_pred cCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcHHHHHHHHHhc---CC-ceEEEc
Q 014892 146 SCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGA---RP-IFSVGE 221 (416)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~~~~~~~~~~~---~~-~~~vgE 221 (416)
.++... ..+ +.+++|+++|+||++|++++++|++++||||||||++++++.++|+++..++ +| .+++||
T Consensus 606 --~~g~~~----~~~-~~~~l~~~~~~vr~~i~d~l~~W~~e~gvDGfR~D~~~~~~~~~~~~~~~~~~~~~p~~~ligE 678 (1014)
T 2ya1_A 606 --ADGTPR----TSF-GGGRLGTTHHMTKRLLIDSIKYLVDTYKVDGFRFDMMGDHDAASIEEAYKAARALNPNLIMLGE 678 (1014)
T ss_dssp --TTCCBC----EET-TEECBCTTSHHHHHHHHHHHHHHHHHHCCCEEEETTGGGSBHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred --CCCCcc----cCC-CCCCcCcCCHHHHHHHHHHHHHHHHhcCceEEEEeCCCCCCHHHHHHHHHHHHHhCCCeEEEEe
Confidence 011100 001 1357999999999999999999999999999999999999999999887665 45 789999
Q ss_pred ccCCCCCCCCCCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHh---------cC---chhhhhhhcCCCCCcc-
Q 014892 222 YWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAV---------KG---QFWRLRDAQGKPPGVM- 288 (416)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~---------~~---~~~~~~~~~~~~~~~~- 288 (416)
.|+... +...+... .....|+... .....|+..++..++..+ .| ....+...+......+
T Consensus 679 ~W~~~~---g~~~~~~~---~~~~~w~~~~-~~~~~f~d~~r~~l~~~~~~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~ 751 (1014)
T 2ya1_A 679 GWRTYA---GDENMPTK---AADQDWMKHT-DTVAVFSDDIRNNLKSGYPNEGQPAFITGGKRDVNTIFKNLIAQPTNFE 751 (1014)
T ss_dssp CCSCCC---CSTTCCCC---BSSGGGGGGC-SSSEEECHHHHHHHSCCTTSTTCCCTTTTCCEEHHHHHHHHTTCCSSSC
T ss_pred eccccc---Cccccccc---ccccchhhcC-CcccchhHHHHHHHhcccccccchhhhccCcccHHHHHHHHhcCccccc
Confidence 997421 00000000 0001233221 123445555544444211 01 1122333222111111
Q ss_pred ccccCcceecccCCCCCCCCCCC-------CCC-------hhhHHHHHHHHhcCCCeeEEecCCcCCC------------
Q 014892 289 GWWPSRAVTFLDNHDTGSTQAHW-------PFP-------SNHIMEGYAYILMHPGIPSVFYDHFYDW------------ 342 (416)
Q Consensus 289 ~~~p~~~~~fl~nHD~~R~~~~~-------~~~-------~~~~~~a~a~llt~pGiP~Iy~G~E~gw------------ 342 (416)
...|..+++|++|||+.|+...+ ... .+++++|++++|++||+||||||+|+|-
T Consensus 752 ~~~p~~~vnfv~nHD~~~l~d~v~~~~~~~~~~~~~~~~~~~~~rla~~lll~spGiP~i~~GdE~g~t~~~~d~~~r~~ 831 (1014)
T 2ya1_A 752 ADSPGDVIQYIAAHDNLTLFDIIAQSIKKDPSKAENYAEIHRRLRLGNLMVLTAQGTPFIHSGQEYGRTKQFRNPAYRTP 831 (1014)
T ss_dssp CSSGGGEEECSCCSSSSCHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHTSSSEEEEETTTTTTCCCBCCCGGGSSC
T ss_pred cCChhhheEeeecCCCCcccchhhhhccCCcccchhhHHHHHHHHHHHHHHHhCCCCcEEEechhhcccCCCCChhhhhh
Confidence 23466889999999999864311 101 1378999999999999999999999742
Q ss_pred ------------------------------------------c-----------hhHHHHHHHHHHHHHhCcccCCCCeE
Q 014892 343 ------------------------------------------G-----------DSIHNQIVKLMDVRRQQDIHSRSSIK 369 (416)
Q Consensus 343 ------------------------------------------~-----------~~l~~~~~~Li~lR~~~~~l~~G~~~ 369 (416)
+ .++++++|+||+|||++|+|+.|++.
T Consensus 832 ~~~g~~~e~~~~~~~~~g~~f~~~~~~~dsy~~~~~~n~ldW~~~~~~~~~~~~~~l~~f~r~Li~LRk~~pal~~g~~~ 911 (1014)
T 2ya1_A 832 VAEDKVPNKSHLLRDKDGNPFDYPYFIHDSYDSSDAVNKFDWTKATDGKAYPENVKSRDYMKGLIALRQSTDAFRLKSLQ 911 (1014)
T ss_dssp CCTTTCCTTEEEEECTTSCEEEEEEEESCCTTCCHHHHCCCHHHHHCTTTCHHHHHHHHHHHHHHHHHHHCGGGSCSCHH
T ss_pred hhcccccchhhhhhcccccccccccccccCCCCCccccccCCccccccccccchHHHHHHHHHHHHHHhhCccccCCchh
Confidence 1 14889999999999999999999864
Q ss_pred EE-------E--------ecCCEEEEEE----CCEEEEEEcCCCC
Q 014892 370 IL-------E--------AQSNLYSAII----GDKVCMKIGDGSW 395 (416)
Q Consensus 370 ~~-------~--------~~~~~~~~~R----~~~~lvvinn~~~ 395 (416)
.+ . .++.+++|.| +++++|++|.+..
T Consensus 912 ~~~~~~~~~~~~g~~~~~~~~~v~a~~r~~~~~~~~lVv~N~~~~ 956 (1014)
T 2ya1_A 912 DIKDRVHLITVPGQNGVEKEDVVIGYQITAPNGDIYAVFVNADEK 956 (1014)
T ss_dssp HHHHHEEESSCTTSTTCCSEESEEEEEEECTTSCEEEEEEECSSS
T ss_pred hhcCceEEEcCCCCCcccCCCcEEEEEEECCCCCEEEEEEcCCCC
Confidence 32 1 1235899987 3578999998653
|
| >2fhf_A Pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, complex with maltotetraose, hydrolase; HET: GLC; 1.65A {Klebsiella aerogenes} SCOP: b.1.18.2 b.1.18.2 b.3.1.3 b.71.1.1 c.1.8.1 PDB: 2fh6_A* 2fh8_A* 2fhb_A* 2fhc_A* 2fgz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-52 Score=451.12 Aligned_cols=356 Identities=16% Similarity=0.163 Sum_probs=235.1
Q ss_pred eEEEeeecCCCC---------CCcHHHHHh-------hhhhHHHcCCCEEEeCCCCCC----------------------
Q 014892 30 ILFQGFNWESCK---------HDWWRNLER-------KVPDISKSGFTSVWLPPATHS---------------------- 71 (416)
Q Consensus 30 ~~~q~f~~~~~~---------~G~~~gi~~-------~LdyLk~LGv~~I~L~Pi~~~---------------------- 71 (416)
+||++..++++. .|+|.|+++ +|+|||+||||+||||||+++
T Consensus 425 vIYE~hvr~ft~~~~~~~~~~~Gt~~g~~e~~~~~i~~L~~L~~lGvt~i~LlPv~~~~~v~e~~~~~~~~~~p~~~~~~ 504 (1083)
T 2fhf_A 425 TIHESHIRDLSAWDQTVPAELRGKYLALTAQESNMVQHLKQLSASGVTHIELLPVFDLATVNEFSDKVADIQQPFSRLCE 504 (1083)
T ss_dssp EEEEECHHHHHTTCTTSCGGGTTSGGGGGCTTSHHHHHHHHHHHHTCCEEEESCCEEESSSCCCGGGCCCTTSBHHHHHH
T ss_pred EEEEEecchhcCCCCCCCcCCCCChhhhhhhhhhhHHHHHHHHhcCCCEEEECCcccccccccccccccccccccccccc
Confidence 999999987653 499999976 699999999999999999952
Q ss_pred ------------------------------------------------CC-CCCcccccCCCCCCCCCC-------HHHH
Q 014892 72 ------------------------------------------------FA-PEGYLPQNLYSLNSSYGS-------EHLL 95 (416)
Q Consensus 72 ------------------------------------------------~~-~~GY~~~d~~~id~~~Gt-------~~d~ 95 (416)
.+ +|||++.|||+|+|+||+ .+||
T Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~y~~~~d~~nwGYd~~~y~a~~~~yGt~p~~~~r~~ef 584 (1083)
T 2fhf_A 505 VNSAVKSSEFAGYCDSGSTVEEVLTQLKQNDSKDNPQVQALNTLVAQTDSYNWGYDPFHYTVPEGSYATDPEGTARIKEF 584 (1083)
T ss_dssp HCHHHHTSTTGGGTTSSCBHHHHHHHHSTTCBTTBCHHHHHHHHHTTSSSCCCCCCEEEEEEECSTTSSCCSTTHHHHHH
T ss_pred cccccccccccccccccccchhhhhcccccccchhhhhhhhhccccccCCCCCCCCcCcCCCcChhhcCCCCccccHHHH
Confidence 11 399999999999999999 8999
Q ss_pred HHHHHHHHHC-CCEEEEEEccccCcCCCCCCCCcc-cccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHH
Q 014892 96 KALLHKMKQH-KVRAMADIVINHRVGTTQGHGGKY-NRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFV 173 (416)
Q Consensus 96 ~~Lv~~aH~~-Gi~VilD~V~NH~~~~~~~~~~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v 173 (416)
|+||++||++ ||+||||+|+||++..++|+...+ ..+....+.|... .++.. .++.+..++|++||+|
T Consensus 585 k~LV~~~H~~~GI~VILDvV~NHt~~~~~~~~~~~~d~~~p~yy~~~~p-----~~g~~-----~~~tg~~dln~~~p~V 654 (1083)
T 2fhf_A 585 RTMIQAIKQDLGMNVIMDVVYNHTNAAGPTDRTSVLDKIVPWYYQRLNE-----TTGSV-----ESATCCSDSAPEHRMF 654 (1083)
T ss_dssp HHHHHHHHHTSCCEEEEEECTTEESCCSSSCTTCCHHHHSTTTSBCBCT-----TTCCB-----CCTTSSEEBCTTSHHH
T ss_pred HHHHHHHHhhcCCEEEEEeccccCcCCCccchhccccCCCCCceeecCC-----CCCce-----ecCCccCCcCcCCHHH
Confidence 9999999998 999999999999999997754221 1111000111100 01111 1122345789999999
Q ss_pred HHHHHHHHHHHHHhcCCCeEEecccCCCcHHHHHHHHHhc---CC-ceEEEcccCCCCC-------CCCC--CCC--ccc
Q 014892 174 RKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGA---RP-IFSVGEYWDSCNY-------NSHG--LDY--NQD 238 (416)
Q Consensus 174 ~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~~~~~~~~~~~---~~-~~~vgE~~~~~~~-------~~~~--~~~--~~~ 238 (416)
|++|+++++||+++|||||||||++++++.++|.++++.+ .| .+++||.|+.... +.+. ..+ ..+
T Consensus 655 r~~i~d~l~~W~~e~gVDGfR~D~a~~~~~~~~~~~~~~l~~~~p~~~ligE~w~~~~~~~~~~a~q~~~~g~~ig~fnd 734 (1083)
T 2fhf_A 655 AKLIADSLAVWTTDYKIDGFRFDLMLYHPKAQILSAWERIKALNPDIYFFGEGWDSNQSDRFEIASQINLKGTGIGTFSD 734 (1083)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEETTGGGSBHHHHHHHHHHHHTTCTTCEEEECCCCCSCTTTSCBCCTTTTTTSSCEEECH
T ss_pred HHHHHHHHHHHHHHhCCcEEEEeCcccCCHHHHHHHHHHHHHhCCCeEEEEeeccCccccchhhhhhhhccCCchhhhhH
Confidence 9999999999999999999999999999999999887755 44 7899999986421 0000 000 000
Q ss_pred hhhHhHhh---hhccC-----CCcc-ccc------CchhhHHHH-------HHhcCchhh--hhh-----------hcCC
Q 014892 239 SHRQRIIN---WIDGT-----GQLS-AAF------DFTTKGILQ-------EAVKGQFWR--LRD-----------AQGK 283 (416)
Q Consensus 239 ~~~~~l~~---~~~~~-----~~~~-~~f------df~~~~~l~-------~~~~~~~~~--~~~-----------~~~~ 283 (416)
..++.+.. |.... .++. ..+ ...+...+. ....+.... +.+ .+..
T Consensus 735 ~~Rd~vr~~~~F~~g~~l~~~~gf~~G~~~~p~~~~~~~a~rl~~~~d~~~~~~~g~l~~f~~~~~~g~~l~gs~~~y~~ 814 (1083)
T 2fhf_A 735 RLRDAVRGGGPFDSGDALRQNQGVGSGAGVLPNELTTLSDDQARHLADLTRLGMAGNLADFVLIDKDGAVKRGSEIDYNG 814 (1083)
T ss_dssp HHHHHHHCSCTTCCTTHHHHCCCGGGTTTTSCCSSCCCCHHHHHHHHHHHHHHHTTCBTTCEEECTTSCEEEGGGSEETT
T ss_pred HHHHHHhccCccccccccccccceeeccccccccchHHHHHHhhchhhhhhhhhhhhhhhhhhccccccccccchhhhcc
Confidence 11122211 11000 0000 000 000000000 000111000 000 0000
Q ss_pred CCCccccccCcceecccCCCCCCCCCCC------CC----ChhhHHHHHHHHhcCCCeeEEecCCcCCCc----------
Q 014892 284 PPGVMGWWPSRAVTFLDNHDTGSTQAHW------PF----PSNHIMEGYAYILMHPGIPSVFYDHFYDWG---------- 343 (416)
Q Consensus 284 ~~~~~~~~p~~~~~fl~nHD~~R~~~~~------~~----~~~~~~~a~a~llt~pGiP~Iy~G~E~gw~---------- 343 (416)
....+...|...++|++|||+.|+.+.+ .. ..++.++|++++||+||+||||||||+|-.
T Consensus 815 ~~~~~~~~p~~~infl~nHD~~rL~D~vs~~~~~~~~~~~r~r~~kla~alLlts~GiP~IY~GdEiG~t~~gn~n~Y~~ 894 (1083)
T 2fhf_A 815 APGGYAADPTEVVNYVSKHDNQTLWDMISYKAAQEADLDTRVRMQAVSLATVMLGQGIAFDQQGSELLRSKSFTRDSYDS 894 (1083)
T ss_dssp EESCCBSSGGGEEECSCCSSSSCHHHHHHHHSCTTCCHHHHHHHHHHHHHHHHTSSSEEEEETTGGGTCCCTTCSCCTTS
T ss_pred cccccccCccceeeeeccCCcchhhhhhhhhcCCccchHHHHHHHHHHHHHHHHCCCCcEEEeehhcCCcCCcccCcccc
Confidence 0000112355789999999999963211 00 124578999999999999999999997421
Q ss_pred ------------------------------------------------hhHHHHHHHHHHHHHhCcccCCCCe-------
Q 014892 344 ------------------------------------------------DSIHNQIVKLMDVRRQQDIHSRSSI------- 368 (416)
Q Consensus 344 ------------------------------------------------~~l~~~~~~Li~lR~~~~~l~~G~~------- 368 (416)
.++++++|+||+|||++|+|+.|+.
T Consensus 895 ~d~~n~~dW~~~dN~ws~g~p~~~~~~~~W~~~~~~~~~nv~~q~~d~~sl~~f~r~LI~LRk~~paLr~g~~~~i~~~v 974 (1083)
T 2fhf_A 895 GDWFNRVDYSLQDNNYNVGMPRSSDDGSNYDIIARVKDAVATPGETELKQMTAFYQELTALRKSSPLFTLGDGATVMKRV 974 (1083)
T ss_dssp HHHHHCCCTTCSCCSCSSSCCCHHHHGGGHHHHHHHTTSSCCCCHHHHHHHHHHHHHHHHHHTSCGGGGCCCHHHHHHHE
T ss_pred ccccccccccccCccccccccccccccCCchhccccccccccccccCHHHHHHHHHHHHHHHhhCHHhcCCccccccceE
Confidence 3589999999999999999999984
Q ss_pred EEEEec----CCEEEEEE-C------------CEEEEEEcCCCC
Q 014892 369 KILEAQ----SNLYSAII-G------------DKVCMKIGDGSW 395 (416)
Q Consensus 369 ~~~~~~----~~~~~~~R-~------------~~~lvvinn~~~ 395 (416)
.++..+ +++++|.| . ++++|++|.+..
T Consensus 975 ~~~~~~~~~~~~vlaf~R~~~~~~~~~~d~~~~~llVv~N~s~~ 1018 (1083)
T 2fhf_A 975 DFRNTGADQQTGLLVMTIDDGMQAGASLDSRVDGIVVAINAAPE 1018 (1083)
T ss_dssp EEESCSTTCCTTEEEEEEECSTTTSSCSCTTEEEEEEEEECSSS
T ss_pred EEecCCCCCCCCEEEEEEcCCCccccccCCCCCEEEEEEeCCCC
Confidence 444443 57999988 2 268888888653
|
| >4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-48 Score=421.09 Aligned_cols=190 Identities=18% Similarity=0.179 Sum_probs=144.7
Q ss_pred cCceeEEEeeecCCC---------CCCcHHHH-------HhhhhhHHHcCCCEEEeCCCCCCC-----------------
Q 014892 26 NGREILFQGFNWESC---------KHDWWRNL-------ERKVPDISKSGFTSVWLPPATHSF----------------- 72 (416)
Q Consensus 26 ~~~~~~~q~f~~~~~---------~~G~~~gi-------~~~LdyLk~LGv~~I~L~Pi~~~~----------------- 72 (416)
..+.+||.+-.++++ ..|+|.|+ +++|||||+||||+||||||++++
T Consensus 250 ~~~~vIYE~HVr~ft~~~~~~~~~~~Gtf~g~~~~~~~~ie~L~yLk~LGVtaveLmPv~e~~~~~~~~~~~~~~d~~~l 329 (884)
T 4aio_A 250 FSDITIYELHIRDFSAHDGTVDSDSRGGFRAFAYQASAGMEHLRKLSDAGLTHVHLLPSFHFAGVDDIKSNWKFVDECEL 329 (884)
T ss_dssp GGGCCEEEECHHHHHTTCTTSCTTTTTSGGGGSCTTSHHHHHHHHHHHHTCCEEEECCCEEESSSCSCGGGCCCCCHHHH
T ss_pred cccCEEEEEEcCccccCCCCCCccccCcccccccchhhHHHHhHHHHHcCCCEEEeccccccCccccccccccccccccc
Confidence 356899999887553 24888764 899999999999999999999864
Q ss_pred ----------------------CCCCcccccCCCCCCCCCCH-------HHHHHHHHHHHHCCCEEEEEEccccCcCCCC
Q 014892 73 ----------------------APEGYLPQNLYSLNSSYGSE-------HLLKALLHKMKQHKVRAMADIVINHRVGTTQ 123 (416)
Q Consensus 73 ----------------------~~~GY~~~d~~~id~~~Gt~-------~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~ 123 (416)
.+|||+|.+||+++++|||. +|||+||++||++||+||||+|+||++.+|+
T Consensus 330 ~~~~~~~~~~~~l~~~~~~~~~~~WGYd~~~y~a~~~~ygt~~d~~~~~~efk~LV~~aH~~GIkVIlDvV~NHts~~h~ 409 (884)
T 4aio_A 330 ATFPPGSDMQQAAVVAIQEEDPYNWGYNPVLWGVPKGSYASDPDGPSRIIEYRQMVQALNRIGLRVVMDVVYNHLDSSGP 409 (884)
T ss_dssp TTSCTTCSHHHHHHHHHTTTSSCCCCCCEEEEEEECGGGSSCSSTTHHHHHHHHHHHHHHHTTCEEEEEECCSBCSCCSS
T ss_pred cccCCchHHHHhhhhhhhhccccccCcCcccccCCCcccccCccccchHHHHHHHHHHHHhcCCceeeeeccccccCCCc
Confidence 26899999999999999994 5699999999999999999999999999999
Q ss_pred CCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcH
Q 014892 124 GHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSA 203 (416)
Q Consensus 124 ~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~ 203 (416)
|+.............|... .++.. .+....+++|+++|+|++++++.+++|+++++|||||+|++..+..
T Consensus 410 wf~~~~~~~~~~~~~~~~~-----~~~~~-----~~~~~~~~~~~~~~~v~~~~~d~~~~w~~~~~vDg~R~D~~~~~~~ 479 (884)
T 4aio_A 410 CGISSVLDKIVPGYYVRRD-----TNGQI-----ENSAAMNNTASEHFMVDRLIVDDLLNWAVNYKVDGFRFDLMGHIMK 479 (884)
T ss_dssp SSTTCCHHHHSTTTSBCBC-----TTSCB-----CCTTSSSBBCTTSHHHHHHHHHHHHHHHHHSCCCEEEETTGGGSBH
T ss_pred chhhccccccCcceeeccC-----CCCCc-----cCcCCccccCCCCchhhhhhhhhhhhhhhhcccccCCcccchhhhh
Confidence 8653211100000111100 01110 1123457789999999999999999999999999999999999987
Q ss_pred HHHHHHHHhcC------------CceEEEcccCC
Q 014892 204 KYVKEYIEGAR------------PIFSVGEYWDS 225 (416)
Q Consensus 204 ~~~~~~~~~~~------------~~~~vgE~~~~ 225 (416)
..+..+..... ...+++|.|+.
T Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~e~~~~ 513 (884)
T 4aio_A 480 RTMMRAKSALQSLTTDAHGVDGSKIYLYGEGWDF 513 (884)
T ss_dssp HHHHHHHHHHHTCCHHHHSSCGGGCEEEECCCCC
T ss_pred HHHHhhhhhcccccccccccccccceecccCCcc
Confidence 76555443221 24678998865
|
| >1iv8_A Maltooligosyl trehalose synthase; beta alpha barrel, intramolecular transglucosylation, isomerase; HET: MLZ MLY; 1.90A {Sulfolobus acidocaldarius} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-45 Score=383.02 Aligned_cols=183 Identities=15% Similarity=0.160 Sum_probs=142.5
Q ss_pred CCCCCcHHHHHhhhhhHHHcCCCEEEeCCCCCCC--CCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccc
Q 014892 39 SCKHDWWRNLERKVPDISKSGFTSVWLPPATHSF--APEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVIN 116 (416)
Q Consensus 39 ~~~~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~--~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~N 116 (416)
+.+.|+|+||+++|||||+||||+|||+||+++. ++|||+|+||++|+|+||+++||++||++||++||+||+|+|+|
T Consensus 10 ~~~gGtf~gi~~~LdYLk~LGVtaIwLsPi~~~~~gs~hGYdv~Dy~~Idp~lGt~edfk~LV~aaH~~GIkVIlDvV~N 89 (720)
T 1iv8_A 10 LNKNFNFGDVIDNLWYFXDLGVSHLYLSPVLMASPGSNHGYDVIDHSRINDELGGEKEYRRLIETAHTIGLGIIQDIVPN 89 (720)
T ss_dssp CBTTBCHHHHHHTHHHHHHHTCCEEEECCCEEECTTCSSCCSEEEEEEECTTTTHHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCCCCCHHHHHHHHHHHHhCCCCEEEECCcccCCCCCCCCCCCccCCCcCccCCCHHHHHHHHHHHHHCCCEEEEEeccc
Confidence 4557899999999999999999999999999975 79999999999999999999999999999999999999999999
Q ss_pred cCc--CCCCCCC--------Cccccc-CCCCC------------------------CCCCCc--eecC----C--CC---
Q 014892 117 HRV--GTTQGHG--------GKYNRY-DGIPL------------------------SWDEHA--VTSC----T--GG--- 150 (416)
Q Consensus 117 H~~--~~~~~~~--------~~~~~f-~~~~~------------------------~~~~~~--~~~~----~--~~--- 150 (416)
|++ .+++|+. +.|..| .-.+. .|++.. ...| + ++
T Consensus 90 Hta~~~~~~wf~d~l~~G~~s~y~d~f~~~~~~g~~~~P~~g~~yg~~l~~g~l~~~~d~g~~~~~Yy~~~fp~~~~~~~ 169 (720)
T 1iv8_A 90 HMAVNSLNWRLMDVLXMGXXSXYYTYFDFFPEDDKIRLPILGEDLDTVISKGLLKIVKDGDEYFLEYFKWKLPLTEVGND 169 (720)
T ss_dssp EEECCTTCHHHHHHHHHGGGSTTGGGBCBCTTCSSEEEEEESSCHHHHHHTTCEEEEECSSCEEEEETTEEEECSCCCSS
T ss_pred cccCccccHHHHHhhhcccccccccceeecCCCCcccCCcccccccccccccceeeeecCCCcchhhccccCCcCccccc
Confidence 999 6665431 222211 10000 000000 0000 0 00
Q ss_pred --------------CC--CCCCC-CCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCC--cHHHHHHHHH
Q 014892 151 --------------LG--NGSTG-DNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGY--SAKYVKEYIE 211 (416)
Q Consensus 151 --------------~~--~~~~~-~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~--~~~~~~~~~~ 211 (416)
|. -.+.+ .++.++|+||++||+|++++++++++| ||||||+|+++++ +.+||+++.+
T Consensus 170 l~~~~~~q~yrl~~W~~~lNyr~f~d~~~L~dLn~enP~V~~~i~d~l~~W----GVDGFRiDaa~~L~~p~~f~~~lr~ 245 (720)
T 1iv8_A 170 IYDTLQKQNYTLMSWKNPPSYRRFFDVNTLIGVNVEXDHVFQESHSXILDL----DVDGYRIDHIDGLYDPEKYINDLRS 245 (720)
T ss_dssp HHHHHTTSSEEEEETTSCCSBCEETTEEEEEEBCTTSHHHHHHHTTTGGGS----CCSEEEETTGGGCSCHHHHHHHHHH
T ss_pred hhhhhhccceecccccccccccccccccCCcccccCcHHHHHHHHHHHHhc----CCCEEEEechhhhcChHHHHHHHHH
Confidence 00 00000 123568999999999999999999999 9999999999999 8999999999
Q ss_pred hcCCceEEEcccCC
Q 014892 212 GARPIFSVGEYWDS 225 (416)
Q Consensus 212 ~~~~~~~vgE~~~~ 225 (416)
.++|.+++||.|..
T Consensus 246 ~v~p~~ligE~~~~ 259 (720)
T 1iv8_A 246 IIKNXIIIVEKILG 259 (720)
T ss_dssp HHTTCEEEECCCCC
T ss_pred HhccceEEeeccCC
Confidence 99888899999975
|
| >3hje_A 704AA long hypothetical glycosyltransferase; trehalose biosynthesis, maltooligoside trehalose synthase (M family 13 glycoside hydrolases; 1.90A {Sulfolobus tokodaii str} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-39 Score=327.53 Aligned_cols=175 Identities=16% Similarity=0.189 Sum_probs=141.8
Q ss_pred CCcHHHHHhhhhhHHHcCCCEEEeCCCCCCC--CCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccccCc
Q 014892 42 HDWWRNLERKVPDISKSGFTSVWLPPATHSF--APEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRV 119 (416)
Q Consensus 42 ~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~--~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~ 119 (416)
+|+|++++++|+||++|||++|||+||+++. ++|||+|.||++|+|+||+++||++||++||++||+||+|+|+||++
T Consensus 11 gGtf~~i~~~LdyL~~LGvt~V~LsPi~e~~~~s~~GYd~~Dy~~vdp~lGt~edfk~LV~~aH~~GI~VilDvV~NH~s 90 (704)
T 3hje_A 11 PMKFSEIRNRLDYFVELGVTHLYLSPVLKARPGSTHGYDVVDYNTINDELGGEEEYIRLIDEAKSKGLGIIQDIVPNHMA 90 (704)
T ss_dssp SCCHHHHHTTHHHHHHHTCSEEEECCCEEESTTCSSSCSEEEEEEECGGGTHHHHHHHHHHHHHHHTCEEEEEECCSEEE
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEECCCccCCCCCCCCCCCcCCCCcCccCCCHHHHHHHHHHHHHCCCEEEEeecccccc
Confidence 6789999999999999999999999999875 68999999999999999999999999999999999999999999999
Q ss_pred C--CCCCC--------CCcccccCCCCCCCCCC--cee---------cC-------------------------------
Q 014892 120 G--TTQGH--------GGKYNRYDGIPLSWDEH--AVT---------SC------------------------------- 147 (416)
Q Consensus 120 ~--~~~~~--------~~~~~~f~~~~~~~~~~--~~~---------~~------------------------------- 147 (416)
. +|+|+ .+.|..|. +|.+. .+. .+
T Consensus 91 ~~~~~~wf~d~l~~g~~s~Y~d~F----~W~~~~g~v~~P~lg~~~~~y~~~l~~G~i~lY~d~~Pl~p~~~~~~~~l~~ 166 (704)
T 3hje_A 91 VHHTNWRLMDVLKKGRHSRYYNYF----DFYEEEEKIRIPILGDRNFKITYVNDEPYLDYYGNLFPINDEGRNYLNDIEK 166 (704)
T ss_dssp CSTTCHHHHHHHHHGGGSGGGGGB----CBCTTCSSEEEEEESSCCCEEEEETTEEEEEETTEEEECCTTGGGCTTCHHH
T ss_pred cccchHHHHHHHhcCCCCCCCccc----cccCCCCceecCcCCCCcccccccccCCceeeccccCCCCcccccccchhhh
Confidence 7 66543 22332211 12110 000 00
Q ss_pred ------------CCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCC--cHHHHHHHHHhc
Q 014892 148 ------------TGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGY--SAKYVKEYIEGA 213 (416)
Q Consensus 148 ------------~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~--~~~~~~~~~~~~ 213 (416)
..+ .+....|...+++|||+++|+|++.+.+.+.+| ||||||+|+++++ |..+|+.+.+..
T Consensus 167 l~~~Q~Yrl~~w~~~-~nyrRff~l~~L~dLn~e~p~V~~~i~~~L~~L----GVdGFRvDaadgL~DP~~yl~rLr~~~ 241 (704)
T 3hje_A 167 LLKVQYYELVDWRDY-PSYRRFFAVNELIAVRQELEWVFEDSHSKILSF----EVDGYRIDHIDGLFKPEEYLRRLKNKI 241 (704)
T ss_dssp HHHTSSEEEEETTSC-CSBCEETTEEEEEEBCTTSHHHHHHHHTTGGGS----CCSEEEETTGGGCSSHHHHHHHHHHHH
T ss_pred hhhhhhhhhcccccc-cccccccccCCchhccCCCHHHHHHHHHHHHHc----CCCEEEEeCcCcccCHHHHHHHHHHhC
Confidence 000 112233455688899999999999999999999 9999999999999 899999999887
Q ss_pred CCceEEEcccCC
Q 014892 214 RPIFSVGEYWDS 225 (416)
Q Consensus 214 ~~~~~vgE~~~~ 225 (416)
.+.++++|....
T Consensus 242 ~~~~iv~EkIl~ 253 (704)
T 3hje_A 242 GNKHIFVEKILS 253 (704)
T ss_dssp TTCEEEECCCCC
T ss_pred CCcEEEEEEeCC
Confidence 778999998754
|
| >3aie_A Glucosyltransferase-SI; beta-alpha-barrels; HET: MES; 2.10A {Streptococcus mutans} PDB: 3aic_A* 3aib_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.7e-31 Score=280.51 Aligned_cols=235 Identities=14% Similarity=0.201 Sum_probs=165.6
Q ss_pred HHHHHHCCCEEEEEEcc-ccCcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHH
Q 014892 99 LHKMKQHKVRAMADIVI-NHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDI 177 (416)
Q Consensus 99 v~~aH~~Gi~VilD~V~-NH~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l 177 (416)
.+.+|++|+.+|+|-|+ ||++...+ .|++.. ...++.+..+||||++||+||++|
T Consensus 151 ~~~~~~~s~~~~l~~~p~n~~G~~~W--------------~~~~~~----------e~g~y~l~~~~DLN~~NP~Vr~~l 206 (844)
T 3aie_A 151 KLTSQANSNYRILNRTPTNQTGKKDP--------------RYTADR----------TIGGYEFLLANDVDNSNPVVQAEQ 206 (844)
T ss_dssp GGGGGGCCSCCCCCCCSTTTTSSCCT--------------TCCSSC----------SCSCCSCCSSEEECTTSHHHHHHH
T ss_pred cccccccCceEecccccccccCCccc--------------eecccc----------ccCceeeCCccccCCCCHHHHHHH
Confidence 44678888888888777 66665110 111100 013455778899999999999999
Q ss_pred HHHHHHHHH---------hcCCCeEEecccCCCcHHHHHHHHHhcC-------------CceEEEcccCCCCCCCCCCCC
Q 014892 178 IAWLRWLRN---------TVGFQDFRFDFARGYSAKYVKEYIEGAR-------------PIFSVGEYWDSCNYNSHGLDY 235 (416)
Q Consensus 178 ~~~~~~w~~---------~~gvDGfRlD~a~~~~~~~~~~~~~~~~-------------~~~~vgE~~~~~~~~~~~~~~ 235 (416)
+++++||++ ++||||||+|+|+|++++||+++++.++ +.|+|||+|..+
T Consensus 207 ~~~~~~Wl~~~~i~~~~~~~GIDGFRlDAvkhv~~df~~~~~~~l~~~~~~~~~~~~~~d~~~VGEvw~~~--------- 277 (844)
T 3aie_A 207 LNWLHFLMNFGNIYANDPDANFDSIRVDAVDNVDADLLQIAGDYLKAAKGIHKNDKAANDHLSILEAWSYN--------- 277 (844)
T ss_dssp HHHHHHHHTHHHHHHSCTTSCCCEEEETTGGGSCTHHHHHHHHHHHHHHCTTTBHHHHHTSCCEECCCSTT---------
T ss_pred HHHHHHHhhccccccccccCCCCEEEEehhhcCCHHHHHHHHHHHHHHhcccccccccCCeEEEEecCCCC---------
Confidence 999999996 6999999999999999999999876532 258999999762
Q ss_pred ccchhhHhHhhhhccCCCcccccCchhhHHHHHHhcC------chhhhhhhcCCCCCccccccC------c-ceecccCC
Q 014892 236 NQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKG------QFWRLRDAQGKPPGVMGWWPS------R-AVTFLDNH 302 (416)
Q Consensus 236 ~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~~~------~~~~~~~~~~~~~~~~~~~p~------~-~~~fl~nH 302 (416)
. ..|+...++..++|||+++..+..++.. ++.++..... ....|. . .++|++||
T Consensus 278 -------~-~~Y~~~~~~~~~vfDFpl~~~l~~~l~~~~~~~~~L~~l~~~~l-----~~~~p~~~~~~~~~~~tFldNH 344 (844)
T 3aie_A 278 -------D-TPYLHDDGDNMINMDNRLRLSLLYSLAKPLNQRSGMNPLITNSL-----VNRTDDNAETAAVPSYSFIRAH 344 (844)
T ss_dssp -------H-HHHHHHHTSSSBEECHHHHHHHHHHTTSCGGGCCCSTHHHHSSS-----SCCSEECCSSCSSCEEECSCCS
T ss_pred -------h-HHHhhcCCCcceeeChHHHHHHHHHHHhhccCHHhHHHHHHHHH-----HhhCcccccccceeeEEEeeCC
Confidence 1 3455444557889999998888866521 2333333211 111121 1 67999999
Q ss_pred CCCCC---CC-------------CCCCCh---------------------hhHHHHHHHHhcCC-CeeEEecCCcCCCc-
Q 014892 303 DTGST---QA-------------HWPFPS---------------------NHIMEGYAYILMHP-GIPSVFYDHFYDWG- 343 (416)
Q Consensus 303 D~~R~---~~-------------~~~~~~---------------------~~~~~a~a~llt~p-GiP~Iy~G~E~gw~- 343 (416)
|++|. .+ .+..+. .+.++|+|+||++| |+|+||||+|+|..
T Consensus 345 Dt~R~~Ri~s~l~~~~~~~~~g~~~~~d~~~~~le~~~~~~~~~~k~y~~~~~~lA~AllLt~~~GiP~IYYGdEiGm~G 424 (844)
T 3aie_A 345 DSEVQDLIRDIIKAEINPNVVGYSFTMEEIKKAFEIYNKDLLATEKKYTHYNTALSYALLLTNKSSVPRVYYGDMFTDDG 424 (844)
T ss_dssp STTTHHHHHHHHHHHTCTTCCTTCCCHHHHHHHHHHHHHHHHCSSCSSSCSCHHHHHHHHTTCSSSEEEEEHHHHBCSSS
T ss_pred cCCCccchhhhhccccccccccccccchhhhhhhhhhhhhhhccccccchhHHHHHHHHHHHhCCCCceEEeccccCCCC
Confidence 99984 21 011000 01577999999998 99999999999864
Q ss_pred ------hhHHHHHHHHHHHHHhCcccCCCCeE---EEEecCCEEEEEE
Q 014892 344 ------DSIHNQIVKLMDVRRQQDIHSRSSIK---ILEAQSNLYSAII 382 (416)
Q Consensus 344 ------~~l~~~~~~Li~lR~~~~~l~~G~~~---~~~~~~~~~~~~R 382 (416)
.+++++|++|+++|++++ .|... ....++++++|.|
T Consensus 425 ~~~~~~~~~~d~I~~L~~~Rk~~~---~G~q~~~~~~~~~~~vla~~R 469 (844)
T 3aie_A 425 QYMAHKTINYEAIETLLKARIKYV---SGGQAMRNQQVGNSEIITSVR 469 (844)
T ss_dssp STTCSBCTTHHHHHHHHHHHHHHC---CSCEEEEEEEETTEEEEEEEE
T ss_pred CCCCCcHHHHHHHHHHHHHHHHhh---hCCcccceeccCcccceEEEE
Confidence 368899999999999985 35443 2234467999988
|
| >3klk_A Glucansucrase; native form, open conformation, multidomain protein, glycosyltransferase, transferase; 1.65A {Lactobacillus reuteri} PDB: 3kll_A* 3hz3_A* 4amc_A | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-29 Score=269.59 Aligned_cols=206 Identities=15% Similarity=0.269 Sum_probs=154.1
Q ss_pred CCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHH---------hcCCCeEEecccCCCcHHHHHHHHHhcC-----------
Q 014892 155 STGDNFHGVPNIDHTQHFVRKDIIAWLRWLRN---------TVGFQDFRFDFARGYSAKYVKEYIEGAR----------- 214 (416)
Q Consensus 155 ~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~---------~~gvDGfRlD~a~~~~~~~~~~~~~~~~----------- 214 (416)
..++++..+||||++||+||++|+++++||++ ++||||||+|+|+||+++||++++++++
T Consensus 236 ~g~~d~l~l~DLN~~NPeVr~el~~~~~~Wld~g~w~~~~~e~GVDGFRLDAVkhI~~dFl~ef~~~l~~~~~~~~~~~~ 315 (1039)
T 3klk_A 236 YGGAEFLLANDIDNSNPVVQAEELNWLYYLMNFGTITGNNPEANFDGIRVDAVDNVDVDLLSIARDYFNAAYNMEQSDAS 315 (1039)
T ss_dssp CCSCSCCSSEEECTTSHHHHHHHHHHHHHHHTHHHHHHSCTTSSCCEEEETTGGGSCTHHHHHHHHHHHHHHCGGGCHHH
T ss_pred cCCcccccccccCCCCHHHHHHHHHHHHHHHhhccccccccccCCCEEEEehhhcCCHHHHHHHHHHHHHHhcccccccc
Confidence 46788899999999999999999999999996 6999999999999999999999887653
Q ss_pred --CceEEEcccCCCCCCCCCCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHhcCch---hhhhhhcCCCCCccc
Q 014892 215 --PIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKGQF---WRLRDAQGKPPGVMG 289 (416)
Q Consensus 215 --~~~~vgE~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~ 289 (416)
+.++|||+|..+ ...|+...++..++|+++++..+..++.... ..+...+.. .+..
T Consensus 316 a~d~f~VGEvw~~~-----------------~~~Yl~~~~~~~s~~Dfpl~~~l~~a~~~~~~~~~dL~~l~~~--~l~~ 376 (1039)
T 3klk_A 316 ANKHINILEDWGWD-----------------DPAYVNKIGNPQLTMDDRLRNAIMDTLSGAPDKNQALNKLITQ--SLVN 376 (1039)
T ss_dssp HTTSCCEECCCCTT-----------------HHHHHHHTTCSSBEECHHHHHHHHHHTSSCTTTCCCTTHHHHS--SSSC
T ss_pred cCCeEEEEecCCCC-----------------HHHHHhccCCccceechHHHHHHHHHhcccccchhhHHHHHHH--HHHh
Confidence 268999999752 1355555555678999999999998873221 122222211 0111
Q ss_pred ccc-------CcceecccCCCCCCC------CC------CCC-----------------------CChhhHHHHHHHHhc
Q 014892 290 WWP-------SRAVTFLDNHDTGST------QA------HWP-----------------------FPSNHIMEGYAYILM 327 (416)
Q Consensus 290 ~~p-------~~~~~fl~nHD~~R~------~~------~~~-----------------------~~~~~~~~a~a~llt 327 (416)
..| ..+++|++|||++|. .+ .+. .......+|+|++|+
T Consensus 377 ~~~~~a~~~~~~~vtFVdNHDt~R~~~i~~~is~~~~~~~l~~t~~~~~~al~~y~~d~~~~~k~y~~~~k~lAyAllLl 456 (1039)
T 3klk_A 377 RANDNTENAVIPSYNFVRAHDSNAQDQIRQAIQAATGKPYGEFNLDDEKKGMEAYINDQNSTNKKWNLYNMPSAYTILLT 456 (1039)
T ss_dssp CTEECCSSCSCCEEEESCBTTBTTHHHHHHHHHHHHCCCTTCCCHHHHHHHHHHHHHHHTSSSCSSSCSCHHHHHHHHHH
T ss_pred cCCccccccccccceEeeCCcCCCcccccccccccccccccccchhhhhhhhhhhcccccccchhhhhhhHHHHHHHHHH
Confidence 112 245899999999983 00 000 001125778888876
Q ss_pred C-CCeeEEecCCcCCCc-------hhHHHHHHHHHHHHHhCcccCCCCeEEEEecCCEEEEEE
Q 014892 328 H-PGIPSVFYDHFYDWG-------DSIHNQIVKLMDVRRQQDIHSRSSIKILEAQSNLYSAII 382 (416)
Q Consensus 328 ~-pGiP~Iy~G~E~gw~-------~~l~~~~~~Li~lR~~~~~l~~G~~~~~~~~~~~~~~~R 382 (416)
+ ||+|+||||||+|.. .+++..|++|+++|+++ ..|.......++++++|+|
T Consensus 457 ~~~GtP~IYYGDeyG~~G~~~~~~~p~~~~I~~Ll~aRk~y---a~G~Q~d~~d~~~vi~~vR 516 (1039)
T 3klk_A 457 NKDSVPRVYYGDLYQDGGQYMEHKTRYFDTITNLLKTRVKY---VAGGQTMSVDKNGILTNVR 516 (1039)
T ss_dssp CSSCEEEEEHHHHBCSSBSTTCSBCTTHHHHHHHHHHHHHH---CCSCEEEEECTTSCEEEEE
T ss_pred cCCCeEEEEechhcCCCCCCCcCCCcHHHHHHHHHHHHHHh---ccCCeeEeecCCCEEEEEE
Confidence 6 899999999999864 36789999999999998 5677777777889999999
|
| >3ttq_A Dextransucrase; (beta/alpha)8 barrel, transferase; HET: PG4; 1.90A {Leuconostoc mesenteroides} PDB: 3tto_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=5.6e-24 Score=225.25 Aligned_cols=97 Identities=21% Similarity=0.305 Sum_probs=87.6
Q ss_pred eccCceeEEEeeecCCCCCC-----cHHHHHhhhhhHHHcCCCEEEeCCCCCCC---------CCCCcccccCCC----C
Q 014892 24 IRNGREILFQGFNWESCKHD-----WWRNLERKVPDISKSGFTSVWLPPATHSF---------APEGYLPQNLYS----L 85 (416)
Q Consensus 24 ~~~~~~~~~q~f~~~~~~~G-----~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~---------~~~GY~~~d~~~----i 85 (416)
.+.+.+||||+|.|..+..| ++.+|+++|||||+||||+||||||++++ .++||++.|+|. |
T Consensus 826 ~alds~Vi~QgF~W~~~~~g~~w~~Ty~~I~~kLdYLk~LGITaIwL~Pi~~s~~~~~~~~~~~d~GYdi~D~y~lGf~i 905 (1108)
T 3ttq_A 826 AALDSNLIYEGFSNFQPKATTHDELTNVVIAKNADVFNNWGITSFEMAPQYRSSGDHTFLDSTIDNGYAFTDRYDLGFNT 905 (1108)
T ss_dssp HHHHTCCEEECCCTTCCCCSSGGGSHHHHHHHTHHHHHHHTCCEEECCCCSCBCCCCSSGGGTTTCSSSBSCTTCSSSSS
T ss_pred CCCCCceEEEeEECCCCCCCCccchhHHHHHHHHHHHHHcCCCEEEECCCccCCCccccccccccCCcccccccccCcCC
Confidence 33446899999999988753 45599999999999999999999999986 378999999988 6
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEEccccCcC
Q 014892 86 NSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVG 120 (416)
Q Consensus 86 d~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~ 120 (416)
+|+||+++||++||++||++||+||||+|+||++.
T Consensus 906 ~~~yGt~edfk~LV~alH~~GI~VIlDvV~NHta~ 940 (1108)
T 3ttq_A 906 PTKYGTDGDLRATIQALHHANMQVMADVVDNQVYN 940 (1108)
T ss_dssp CCSSCCHHHHHHHHHHHHHTTCEEEEEECCSEECC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEeccccccC
Confidence 99999999999999999999999999999999974
|
| >3aie_A Glucosyltransferase-SI; beta-alpha-barrels; HET: MES; 2.10A {Streptococcus mutans} PDB: 3aic_A* 3aib_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.7e-23 Score=222.05 Aligned_cols=97 Identities=20% Similarity=0.384 Sum_probs=85.5
Q ss_pred eccCceeEEEeee-cCCCC---CCc-HHHHHhhhhhHHHcCCCEEEeCCCCCCCC---------CCCcccccCCCCC---
Q 014892 24 IRNGREILFQGFN-WESCK---HDW-WRNLERKVPDISKSGFTSVWLPPATHSFA---------PEGYLPQNLYSLN--- 86 (416)
Q Consensus 24 ~~~~~~~~~q~f~-~~~~~---~G~-~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~---------~~GY~~~d~~~id--- 86 (416)
.+-++.||||+|. |.+.. .|+ ++||+++|||||+||||+|||+||++++. +|||+|.|||+|+
T Consensus 606 ~~~~~~ViYe~f~~~~s~~~~g~~~~~~gi~~~l~yLk~LGvt~I~L~Pi~~~~~~~~~~~~~~~~GY~~~d~~~i~es~ 685 (844)
T 3aie_A 606 AALDSRVMFEGFSNFQAFATKKEEYTNVVIAKNVDKFAEWGVTDFEMAPQYVSSTDGSFLDSVIQNGYAFTDRYDLGISK 685 (844)
T ss_dssp HHHHTCCEEECCCTTCCCCSSGGGCHHHHHHHTHHHHHHTTCCEEECCCCSCBCCCCSSGGGTTTCSSSBSCTTCSSCSS
T ss_pred CccCceEEEEeCCCcccCCCCCCcccHHHHHHHHHHHHHCCCCeEEECCcccCCCCCccccccCCCCCccccCccCCCCC
Confidence 3445689999999 33322 234 39999999999999999999999999873 6999999999999
Q ss_pred -CCCCCHHHHHHHHHHHHHCCCEEEEEEccccCcC
Q 014892 87 -SSYGSEHLLKALLHKMKQHKVRAMADIVINHRVG 120 (416)
Q Consensus 87 -~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~ 120 (416)
|+||+++||++||++||++||+||||+|+||++.
T Consensus 686 ~~~~Gt~~df~~lv~~~H~~GI~VilD~V~NH~~~ 720 (844)
T 3aie_A 686 PNKYGTADDLVKAIKALHSKGIKVMADWVPDQMYA 720 (844)
T ss_dssp CBTTBCHHHHHHHHHHHHHTTCEEEEEECCSEECC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEEccCcccC
Confidence 9999999999999999999999999999999964
|
| >3klk_A Glucansucrase; native form, open conformation, multidomain protein, glycosyltransferase, transferase; 1.65A {Lactobacillus reuteri} PDB: 3kll_A* 3hz3_A* 4amc_A | Back alignment and structure |
|---|
Probab=99.88 E-value=4.1e-23 Score=221.11 Aligned_cols=99 Identities=19% Similarity=0.268 Sum_probs=87.1
Q ss_pred eeccCceeEEEeeec--C---CCCCCcHHHHHhhhhhHHHcCCCEEEeCCCCCCC---------CCCCcccccCCC----
Q 014892 23 VIRNGREILFQGFNW--E---SCKHDWWRNLERKVPDISKSGFTSVWLPPATHSF---------APEGYLPQNLYS---- 84 (416)
Q Consensus 23 ~~~~~~~~~~q~f~~--~---~~~~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~---------~~~GY~~~d~~~---- 84 (416)
..+-.+.|||++|-+ . ...+|+|+||+++|||||+||||+||||||++++ .+|||++.|||.
T Consensus 658 ~~~l~~~VIYEGFt~~~~~~~~~~~gt~~gi~~kldyLk~LGVtaIwL~Pi~~~~~~~~~~~~~~~~GYd~~d~~~~~~~ 737 (1039)
T 3klk_A 658 NAALDSNVIYEGFSNFIYWPTTESERTNVRIAQNADLFKSWGITTFELAPQYNSSKDGTFLDSIIDNGYAFTDRYDLGMS 737 (1039)
T ss_dssp SHHHHTCCEEECCCTTBCCCSSGGGCHHHHHHHTHHHHHHTTCCEEECCCCSCBCCCCSSGGGTTTCSSSBSCTTCSSCS
T ss_pred CcccCCcEEEccccccCCCCCCCCCCCHHHHHHHHHHHHHcCCCEEEECccccCCcccccccCcCCCCCCcccccccccC
Confidence 334446899999942 2 2246899999999999999999999999999985 689999999994
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCCEEEEEEccccCcCC
Q 014892 85 LNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGT 121 (416)
Q Consensus 85 id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~ 121 (416)
++|+||+++||++||++||++||+||||+|+||++..
T Consensus 738 i~~~~Gt~~efk~lV~alH~~GI~VIlDvV~NHta~~ 774 (1039)
T 3klk_A 738 TPNKYGSDEDLRNALQALHKAGLQAIADWVPDQIYNL 774 (1039)
T ss_dssp SCBTTBCHHHHHHHHHHHHHTTCEEEEEECCSEECCC
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCEEEEEEccCCcCCC
Confidence 7899999999999999999999999999999999753
|
| >3ttq_A Dextransucrase; (beta/alpha)8 barrel, transferase; HET: PG4; 1.90A {Leuconostoc mesenteroides} PDB: 3tto_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=1.2e-16 Score=169.62 Aligned_cols=202 Identities=16% Similarity=0.212 Sum_probs=142.7
Q ss_pred CCCCCCCCcCCCCCHHHHHHHHHHHHHHH---------HhcCCCeEEecccCCCcHHHHHHHHHhcC-------------
Q 014892 157 GDNFHGVPNIDHTQHFVRKDIIAWLRWLR---------NTVGFQDFRFDFARGYSAKYVKEYIEGAR------------- 214 (416)
Q Consensus 157 ~~~~~~~~dln~~~~~v~~~l~~~~~~w~---------~~~gvDGfRlD~a~~~~~~~~~~~~~~~~------------- 214 (416)
+..+.-..|++.+||.||++++.++.|++ .+.++||||+|||++++.+|++.+.+.++
T Consensus 405 ~ye~Ll~nDvDnsnP~Vqae~lnw~~~l~n~g~i~~~~~~~nfdG~RvDAvdnvdad~l~~~~~~~~~~yg~~~~~~~a~ 484 (1108)
T 3ttq_A 405 AFDFLLANDVDNSNPVVQAENLNWLHYLMNFGTITAGQDDANFDSIRIDAVDFIHNDTIQRTYDYLRDAYQVQQSEAKAN 484 (1108)
T ss_dssp SCCCCSSEEECTTSHHHHHHHHHHHHHHHTHHHHHHSCTTSSCCEEEETTGGGSCHHHHHHHHHHHHHHHCTTSBHHHHT
T ss_pred CeeeEeecccccCChHHHHHHHHHHHHHhhcccccccCCCCCCceEEEechhccCHHHHHHHHHHHHHHhCCCccchhhh
Confidence 34456667999999999999999999999 89999999999999999999987654322
Q ss_pred CceEEEcccCCCCCCCCCCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHhcCc---hhhhhhhcCC---CCCcc
Q 014892 215 PIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKGQ---FWRLRDAQGK---PPGVM 288 (416)
Q Consensus 215 ~~~~vgE~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~~~~---~~~~~~~~~~---~~~~~ 288 (416)
..|.|+|.|... ...++. ..+.||++++..+...+... ...+...+.. ...+.
T Consensus 485 ~h~si~E~W~~~-----------------~~~~~~----~~~l~D~~l~~~l~~~l~~~~~~~~~l~~~~~~~~~~~~lv 543 (1108)
T 3ttq_A 485 QHISLVEAGLDA-----------------GTSTIH----NDALIESNLREAATLSLTNEPGKNKPLTNMLQDVDGGTLIT 543 (1108)
T ss_dssp TSCCEESCSTTC-----------------HHHHTT----TCSBEECSHHHHHHHHTSSCTTSCCCGGGGSEEEETTEEEE
T ss_pred cceEEEeeccCC-----------------cchhcc----CccccchHHHHHHHHHhcCcccccccHHHHhhcccccceee
Confidence 257899999752 112332 22458999999887665222 1122222110 00011
Q ss_pred c-------cccCcceecccCCCCCC-----------CCC-CCC-----------------------CChhhHHHHHHHHh
Q 014892 289 G-------WWPSRAVTFLDNHDTGS-----------TQA-HWP-----------------------FPSNHIMEGYAYIL 326 (416)
Q Consensus 289 ~-------~~p~~~~~fl~nHD~~R-----------~~~-~~~-----------------------~~~~~~~~a~a~ll 326 (416)
. ..+...++||.|||++- +.. ... ...-.+.+|+|+||
T Consensus 544 ~r~~~~~~~~a~pn~sFV~aHDs~~q~~i~~ii~~~~~~~~~~~t~~~~~qa~~~y~~d~~~~~k~y~~~~~PlAYAlIL 623 (1108)
T 3ttq_A 544 DHTQNSTENQATPNYSIIHAHDKGVQEKVGAAITDATGADWTNFTDEQLKAGLELFYKDQRATNKKYNSYNIPSIYALML 623 (1108)
T ss_dssp ECTEECCSSCSCCEEECSCCSSTTTHHHHHHHHHHHSCCBTTBCCHHHHHHHHHHHHHHHTSSSCSSSCSCHHHHHHHHH
T ss_pred ccccccccCccccceEEEecccchhhhhHHHHHhhcccccccccCHHHHHHHHHhhhhhhhhhhhcccccccHHHHHHHH
Confidence 1 12234589999999751 100 000 01113579999999
Q ss_pred cC-CCeeEEecCCcCCCch-------hHHHHHHHHHHHHHhCcccCCCCeEEEEecCCEEEEEE
Q 014892 327 MH-PGIPSVFYDHFYDWGD-------SIHNQIVKLMDVRRQQDIHSRSSIKILEAQSNLYSAII 382 (416)
Q Consensus 327 t~-pGiP~Iy~G~E~gw~~-------~l~~~~~~Li~lR~~~~~l~~G~~~~~~~~~~~~~~~R 382 (416)
+. .|+|||||||-|+.+. +.+..|.+|++.|+.+ ..|.+.....+.+++++.|
T Consensus 624 lrk~g~PcVfygDlY~~~g~~m~~~~~~~~~i~~Ll~AR~~y---a~G~Q~~~~d~~~~i~~vR 684 (1108)
T 3ttq_A 624 TNKDTVPRMYYGDMYQDDGQYMANKSIYYDALVSLMTARKSY---VSGGQTMSVDNHGLLKSVR 684 (1108)
T ss_dssp HCSSCEEEEEGGGTBCTTSSTTTSBCTTHHHHHHHHHHHHHH---CCSCEEEEECTTSCEEEEE
T ss_pred hccCCcceeeehhhcCCCCcccCCCCcchhHHHHHHHHHHHh---cCCCcccccCCCCEEEEEe
Confidence 98 5999999999998642 4568899999999998 7788888888889999999
|
| >2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A* | Back alignment and structure |
|---|
Probab=98.89 E-value=2e-08 Score=105.92 Aligned_cols=136 Identities=10% Similarity=0.060 Sum_probs=89.6
Q ss_pred cHHHHHhhhhhHHHcCCCEEEeCCCCCCCC-CCCcccccCCCCCC-CCCCHHHHHHHHHHHHHCCCEEEEEEccccCcCC
Q 014892 44 WWRNLERKVPDISKSGFTSVWLPPATHSFA-PEGYLPQNLYSLNS-SYGSEHLLKALLHKMKQHKVRAMADIVINHRVGT 121 (416)
Q Consensus 44 ~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~-~~GY~~~d~~~id~-~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~ 121 (416)
+-+.|.+.++.++++|++.|.|=--+.... .+--..-|+ .++| +|. +.++.|++++|++|||+.+-+.+..++.+
T Consensus 344 ~e~~i~~~ad~~~~~G~~~~viDDgW~~~r~~~~~~~Gdw-~~d~~kFP--~Glk~lvd~ih~~Glk~GlW~~P~~v~~~ 420 (720)
T 2yfo_A 344 TGDTIVDLAKEAASLGIDMVVMDDGWFGKRNDDNSSLGDW-QVNETKLG--GSLAELITRVHEQGMKFGIWIEPEMINED 420 (720)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEECSSSBTTCSSTTSCTTCC-SBCHHHHT--SCHHHHHHHHHHTTCEEEEEECTTEECSS
T ss_pred CHHHHHHHHHHHHHcCCcEEEECcccccCCCcccccCCCC-eeChhhcC--ccHHHHHHHHHHCCCEEEEEecccccCCC
Confidence 688899999999999999998754332111 100011122 2332 333 24999999999999999999999887776
Q ss_pred CCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccC
Q 014892 122 TQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFAR 199 (416)
Q Consensus 122 ~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~ 199 (416)
++..... .+|-- ...++.. .. ...+.-||+.||+|++++.+.+..+++++|||+|.+|...
T Consensus 421 S~l~~~h--------pdw~~----~~~~~~~--~~---~~~~~~LD~t~Pea~~~~~~~l~~l~~~~GIDy~K~D~n~ 481 (720)
T 2yfo_A 421 SDLYRAH--------PDWAI----RIQGKKP--VR---SRNQLLLDFSRKEVRDCVFDQICVVLDQGKIDYVKWDMNR 481 (720)
T ss_dssp SHHHHHC--------GGGBC----CCTTSCC--CC---BTTBEEBCTTSHHHHHHHHHHHHHHHTTSCCCEEEECCCS
T ss_pred CHHHHhC--------cceEE----ECCCcCc--cc---CCceEEECCCCHHHHHHHHHHHHHHHHHcCCCEEEECCCC
Confidence 5422111 11110 0011100 00 1234459999999999999999999999999999999854
|
| >3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis} | Back alignment and structure |
|---|
Probab=98.77 E-value=5.9e-07 Score=94.13 Aligned_cols=289 Identities=10% Similarity=0.017 Sum_probs=158.7
Q ss_pred CcHHHHHhhhhhHHHcCCCEEEeCCCCCCCCCC-CcccccCCCCC-CCCCCHHHHHHHHHHHHHCCCEEEEEEccccCcC
Q 014892 43 DWWRNLERKVPDISKSGFTSVWLPPATHSFAPE-GYLPQNLYSLN-SSYGSEHLLKALLHKMKQHKVRAMADIVINHRVG 120 (416)
Q Consensus 43 G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~-GY~~~d~~~id-~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~ 120 (416)
=+-+.|.+.++.++++|++.+.|=--+...... --..-|+ .+| .+|- ..|+.||+++|++||++.+=+.+..++.
T Consensus 344 ~tee~il~~ad~~~~~G~e~fviDDGW~~~r~~d~~~~Gdw-~~d~~kFP--~Gl~~lv~~ih~~Glk~glW~~Pe~v~~ 420 (745)
T 3mi6_A 344 FNEAKLMTIVNQAKRLGIEMFVLDDGWFGHRDDDTTSLGDW-FVDQRKFP--DGIEHFSQAVHQQGMKFGLWFEPEMVSV 420 (745)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEECTTCBTTCSSTTSCTTCC-SBCTTTCT--THHHHHHHHHHHTTCEEEEEECTTEECS
T ss_pred CCHHHHHHHHHHHHHcCCcEEEECcccccCCCCCcccCCCc-eeChhhcC--ccHHHHHHHHHHCCCEEEEEEcccccCC
Confidence 367889999999999999988885433321110 0112232 233 2343 3599999999999999999999988877
Q ss_pred CCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCC
Q 014892 121 TTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARG 200 (416)
Q Consensus 121 ~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~ 200 (416)
+++..+....|+- ...++.. .. ...+.-||+.||+|++++.+.++.+++++|||||.+|+-..
T Consensus 421 dS~l~~~hPdw~l------------~~~~g~~--~~---~r~~~vLD~tnPevr~~i~~~l~~ll~~~GIDy~K~D~nr~ 483 (745)
T 3mi6_A 421 DSDLYQQHPDWLI------------HAPKSTP--TP---GRHQFVLDMARPEVVDYLFKLMSQMIESANLDYIKWDMNRY 483 (745)
T ss_dssp SSSHHHHCGGGBC------------CCTTCCC--CC---SSSCEEBCTTCHHHHHHHHHHHHHHHHHHTCSEEEECCCSC
T ss_pred CCHHHHhCcceEE------------EcCCCce--ee---cCCeEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCC
Confidence 6653221111111 0011110 00 12345699999999999999999999999999999998544
Q ss_pred Cc--------H--------HHHH---HHHHhc---CCceEEEcccCCCCCCCCCCCCccchhhHhHhhhhccCCCccccc
Q 014892 201 YS--------A--------KYVK---EYIEGA---RPIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAF 258 (416)
Q Consensus 201 ~~--------~--------~~~~---~~~~~~---~~~~~vgE~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~f 258 (416)
+. + ...+ ++++++ .|..++ |...+ ++++.++ .+..+....- .....
T Consensus 484 i~~~~~~~~~~~~q~~~~~~y~~g~y~ll~~l~~~~P~v~i-e~Css---GGgR~D~-------g~L~~~~~~W-~SD~t 551 (745)
T 3mi6_A 484 ATEMFSSRLTSDQQLELPHRYILGVYQLYARLTQAYPNVLF-ESCAS---GGGRFDL-------GMMYYAPQAW-TSDDT 551 (745)
T ss_dssp CCSCCCSSSCGGGGGGHHHHHHHHHHHHHHHHHHHCTTCEE-EECST---TTSSCSH-------HHHHHSSEEE-CCSCC
T ss_pred CcccCCCcCccccccHHHHHHHHHHHHHHHHHHhhCCCeEE-EecCC---CCCccCh-------hHHhcCCccc-cCCCC
Confidence 32 1 1111 122332 254544 43322 2233321 1111211100 00000
Q ss_pred CchhhHHHHHHhcCchhhhhhhcCCCCCccccccC----cceecccCCCCCCCCCCCCCChhhHHHHHHHHhcCCCeeEE
Q 014892 259 DFTTKGILQEAVKGQFWRLRDAQGKPPGVMGWWPS----RAVTFLDNHDTGSTQAHWPFPSNHIMEGYAYILMHPGIPSV 334 (416)
Q Consensus 259 df~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~----~~~~fl~nHD~~R~~~~~~~~~~~~~~a~a~llt~pGiP~I 334 (416)
|. ..++.=.++. + + ..|. .-|+-+-||-+.|.... ..+...|+ -|. +-
T Consensus 552 Da-------------~eRl~IQ~Gt--S-~-~yP~~~mgaHvs~~Pnh~t~R~~~l------~~R~~vAm----~G~-~G 603 (745)
T 3mi6_A 552 DA-------------AERLLIQFGT--S-Y-GYPQAMMGAHVSAVPNDQMGRITSL------KTRGAVAF----FGD-LG 603 (745)
T ss_dssp CH-------------HHHHHHHHHH--T-T-TSCGGGEEEEEECSSCTTTCCCCCH------HHHHHHHT----SSE-EE
T ss_pred CH-------------HHHHHHHccc--c-h-hhCHHHHhccccCCccccCCCcCCH------HHHHHHHh----ccC-ce
Confidence 10 0111100110 0 1 1222 22556778888875531 23333332 254 34
Q ss_pred ecCCcCCCchhHHHHHHHHHHHHHhC-cccCCCCeEEEEe-c---CCEEEEEE----CCEEEEEEc
Q 014892 335 FYDHFYDWGDSIHNQIVKLMDVRRQQ-DIHSRSSIKILEA-Q---SNLYSAII----GDKVCMKIG 391 (416)
Q Consensus 335 y~G~E~gw~~~l~~~~~~Li~lR~~~-~~l~~G~~~~~~~-~---~~~~~~~R----~~~~lvvin 391 (416)
|-++--.++.+-.+.+|+.|++-|+. +.++.|++-.+.. . ++..++.. +.+.++++-
T Consensus 604 ~eldl~~ls~~e~~~~~~~i~~YK~~R~~i~~G~~yrL~~p~~~~~~~~a~~~vs~d~~~avv~~~ 669 (745)
T 3mi6_A 604 YELDITKMAPTELDQVKKQVAFYKCYRQLFQFGKFYRIDSPFVEDGNVTSWQVVSDDQKQAIAARY 669 (745)
T ss_dssp EESCSTTCCHHHHHHHHHHHHHHHHTHHHHHHSEEEECSCTTSTTCCEEEEEEECTTSSEEEEEEE
T ss_pred eeeChhhCCHHHHHHHHHHHHHHHHHhHHhccccEEeeCCcccCCCCcEEEEEEcCCCCEEEEEEE
Confidence 55555567788899999999999988 6778898876643 2 34555432 345555443
|
| >2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A* | Back alignment and structure |
|---|
Probab=98.71 E-value=9e-07 Score=93.62 Aligned_cols=136 Identities=9% Similarity=-0.011 Sum_probs=88.1
Q ss_pred cHHHHHhhhhhHHHcCCCEEEeCCCCCCC-CCCCcccccCCCCCC-CCCCHHHHHHHHHHHHHCCCEEEEEEccccCcCC
Q 014892 44 WWRNLERKVPDISKSGFTSVWLPPATHSF-APEGYLPQNLYSLNS-SYGSEHLLKALLHKMKQHKVRAMADIVINHRVGT 121 (416)
Q Consensus 44 ~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~-~~~GY~~~d~~~id~-~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~ 121 (416)
+-+.|.+.++.++++|++.|.|==-+... ..+.-..-|+ .++| +|.+ .++.|++.+|++|||+.+=+.+..++.+
T Consensus 348 ~ee~v~~~ad~~~~~G~~~~viDDGW~~~r~~~~~~~Gd~-~~d~~kFP~--Glk~lv~~ih~~Glk~GlW~~P~~v~~~ 424 (732)
T 2xn2_A 348 NEDKLKTIVDKAKKLGLEMFVLDDGWFGHRDDDNSSLGDW-KVYKKKFPN--GLGHFADYVHEQGLKFGLWFEPEMISYE 424 (732)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEECSSSBTTCSSTTSCTTCC-SBCTTTCTT--CHHHHHHHHHHTTCEEEEEECTTEECSS
T ss_pred CHHHHHHHHHHHHHcCCcEEEEcCcccccCCCCccccCce-eeCchhcCc--cHHHHHHHHHHcCCEEEEEeCccccCCC
Confidence 67889999999999999999773211111 0000011243 4554 3643 5999999999999999999988766554
Q ss_pred CCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccC
Q 014892 122 TQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFAR 199 (416)
Q Consensus 122 ~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~ 199 (416)
++.+... .+|- ....+... ..-..+.-||+.||+|++++.+.+..+++++|||+|.+|...
T Consensus 425 S~l~~~h--------pdw~----~~~~g~~~-----~~~~~~~~LD~t~Pev~~~i~~~l~~~~~~~GVD~~K~D~~~ 485 (732)
T 2xn2_A 425 SNLYKEH--------PDYL----XHVPGRKP-----CPSRNQYVLELGRKEVRDNIFEQMVKILDSKKIDYIKWDMNR 485 (732)
T ss_dssp SHHHHHC--------GGGB----CCCTTSCC-----CCBTTBEEBCTTSHHHHHHHHHHHHHHHTTSCCCEEEECCCC
T ss_pred CHHHHhC--------chhe----ecCCCCCC-----ccCCceEEEcCCCHHHHHHHHHHHHHHHHHcCCCEEEECCCc
Confidence 4321111 1111 00000000 000123458999999999999999988889999999999964
|
| >4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A* | Back alignment and structure |
|---|
Probab=98.17 E-value=0.00015 Score=76.81 Aligned_cols=135 Identities=11% Similarity=-0.021 Sum_probs=84.5
Q ss_pred CcHHHHHhhhhhHHHcCCCEEEeCCCC-CCCC----CCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEcccc
Q 014892 43 DWWRNLERKVPDISKSGFTSVWLPPAT-HSFA----PEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINH 117 (416)
Q Consensus 43 G~~~gi~~~LdyLk~LGv~~I~L~Pi~-~~~~----~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH 117 (416)
=|-+.|.+.++.++++|+..+.|===+ .... ..|.+..| ..+|- ..|+.|++.+|++|||.-+=+-+--
T Consensus 343 ~~e~~i~~~ad~aa~lG~e~fviDDGWf~~r~~d~~~lGdW~~d----~~kFP--~Glk~Lad~vh~~GmkfGLW~epe~ 416 (729)
T 4fnq_A 343 FNEEKLVNIAKTEAELGIELFVLDDGWFGKRDDDRRSLGDWIVN----RRKLP--NGLDGLAKQVNELGMQFGLWVEPEM 416 (729)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEECSCCBTTCCSTTSCTTCCSBC----TTTCT--THHHHHHHHHHHTTCEEEEEECTTE
T ss_pred CCHHHHHHHHHHHHhcCccEEEEcceeecCCCCCcccCCcEEEC----hhhcC--ccHHHHHHHHHHCCCEEEEEeeccc
Confidence 378888999999999999999873222 1111 12222222 12232 3699999999999999988665543
Q ss_pred CcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecc
Q 014892 118 RVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDF 197 (416)
Q Consensus 118 ~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~ 197 (416)
++.+++..+.. ++|--. ..++.. .....+.-||+.+|+|++++.+.+...+++.|||.+.+|.
T Consensus 417 v~~~S~l~~~h--------Pdw~~~----~~~~~~-----~~~r~q~~LD~~~P~v~~y~~~~i~~ll~~~GidYiK~D~ 479 (729)
T 4fnq_A 417 VSPNSELYRKH--------PDWCLH----VPNRPR-----SEGRNQLVLDYSREDVCDYIIETISNVLASAPITYVKWDM 479 (729)
T ss_dssp ECSSSHHHHHC--------GGGBCC----CTTSCC-----CCBTTBEEBCTTSHHHHHHHHHHHHHHHTTTTCCEEEEEC
T ss_pred cCCCcHHHHhC--------chheec----cCccCC-----ccCCccccccCCChhHHHHHHHHHHHHHHHCCCCEEEEcC
Confidence 33333211110 111100 000000 0012344689999999999999999988899999999997
Q ss_pred cCC
Q 014892 198 ARG 200 (416)
Q Consensus 198 a~~ 200 (416)
...
T Consensus 480 n~~ 482 (729)
T 4fnq_A 480 NRH 482 (729)
T ss_dssp CCC
T ss_pred CCC
Confidence 543
|
| >1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13 | Back alignment and structure |
|---|
Probab=97.69 E-value=2.7e-05 Score=79.84 Aligned_cols=130 Identities=12% Similarity=0.174 Sum_probs=83.4
Q ss_pred cHHHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCccc--ccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccccCcCC
Q 014892 44 WWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLP--QNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGT 121 (416)
Q Consensus 44 ~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~--~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~ 121 (416)
+-+.|.+.++.++++|++.|.| +.||.. .|+..-..+|-+ ++.||+++|++|||+.+=+-+--++.+
T Consensus 210 te~~v~~~ad~~~~~G~~~~~I--------DdgW~~~~Gdw~~d~~kFP~---lk~lvd~lh~~Glk~Giw~~P~~v~~~ 278 (564)
T 1zy9_A 210 TWEETLKNLKLAKNFPFEVFQI--------DDAYEKDIGDWLVTRGDFPS---VEEMAKVIAENGFIPGIWTAPFSVSET 278 (564)
T ss_dssp CHHHHHHHHHHGGGTTCSEEEE--------CTTSEEETTEEEEECTTCCC---HHHHHHHHHHTTCEEEEEECTTEEETT
T ss_pred CHHHHHHHHHHHHhcCCcEEEE--------CcccccccCCcccCcccCCC---HHHHHHHHHHCCCEEEEEeCCCccCCC
Confidence 6788999999999999999998 233322 232222345654 999999999999999997766533332
Q ss_pred CCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCC-CCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccC
Q 014892 122 TQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNF-HGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFAR 199 (416)
Q Consensus 122 ~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~ 199 (416)
++. |.. ..+|- ... +|... ..++.| ....-+|+.||++++++.+.++.+ .++|||||.+|...
T Consensus 279 S~l----y~~----~pdw~----v~~-~G~~~-~~~~~W~~~~~~lD~t~P~a~~~~~~~~~~~-~~~GVD~iK~D~~~ 342 (564)
T 1zy9_A 279 SDV----FNE----HPDWV----VKE-NGEPK-MAYRNWNKKIYALDLSKDEVLNWLFDLFSSL-RKMGYRYFKIDFLF 342 (564)
T ss_dssp CHH----HHH----CGGGB----CEE-TTEEC-EEEEETTEEEEEBCTTCHHHHHHHHHHHHHH-HHTTCCEEEECCGG
T ss_pred Chh----HHh----CCCeE----Eec-CCeee-eeecccCCceeecCCCCHHHHHHHHHHHHHH-HhcCCCEEEEcCCC
Confidence 211 100 01111 000 11000 000011 113458999999999999999999 69999999999853
|
| >1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A* | Back alignment and structure |
|---|
Probab=97.59 E-value=0.0002 Score=68.58 Aligned_cols=129 Identities=17% Similarity=0.151 Sum_probs=81.0
Q ss_pred cCceeEEEeee--cCCCCCCcHHHHHhhhhhHHHcCCCEEEeCCCCCC---CCCCCcccccCCCCCCC--------CCCH
Q 014892 26 NGREILFQGFN--WESCKHDWWRNLERKVPDISKSGFTSVWLPPATHS---FAPEGYLPQNLYSLNSS--------YGSE 92 (416)
Q Consensus 26 ~~~~~~~q~f~--~~~~~~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~---~~~~GY~~~d~~~id~~--------~Gt~ 92 (416)
+|..+.++++. |.. ..++-..+.+.|+.||++|+|+|-+....+. +...+ + ++.+.|. -...
T Consensus 15 nG~~~~~~G~n~~~~~-~~~~~~~~~~~l~~~k~~G~N~vR~~~~~~~~~~P~~~~--~--~~~~~~~~~~~~~~~~~~~ 89 (344)
T 1qnr_A 15 DGKVGYFAGTNCYWCS-FLTNHADVDSTFSHISSSGLKVVRVWGFNDVNTQPSPGQ--I--WFQKLSATGSTINTGADGL 89 (344)
T ss_dssp TTEESCEEEEECGGGG-GCCCHHHHHHHHHHHHHTTCCEEECCCCCEESSCCSTTC--C--CSEECCTTCCEECCSTTTT
T ss_pred CCEEEEEEEEeccccc-ccCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCCCCCc--e--eeeecCCCCcccccCHHHH
Confidence 78888888886 432 2236788999999999999999999422211 11000 0 2222221 2357
Q ss_pred HHHHHHHHHHHHCCCEEEEEEccccCcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHH
Q 014892 93 HLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHF 172 (416)
Q Consensus 93 ~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~ 172 (416)
+.|.++++.|+++||+||+|++-++... +..+.|. .|. ...++..+.+|+
T Consensus 90 ~~ld~~i~~a~~~Gi~vild~~~~w~~~---g~~~~~~-------~~~--------------------g~~~~~~~~~~~ 139 (344)
T 1qnr_A 90 QTLDYVVQSAEQHNLKLIIPFVNNWSDY---GGINAYV-------NAF--------------------GGNATTWYTNTA 139 (344)
T ss_dssp HHHHHHHHHHHHHTCEEEEESCBSSSTT---SHHHHHH-------HHH--------------------CSCTTGGGGCHH
T ss_pred HHHHHHHHHHHHCCCEEEEEeccCcccc---CCHHHHH-------HHh--------------------CCChhhhcCCHH
Confidence 8999999999999999999987442100 0000000 000 001234567899
Q ss_pred HHHHHHHHHHHHHHhcC
Q 014892 173 VRKDIIAWLRWLRNTVG 189 (416)
Q Consensus 173 v~~~l~~~~~~w~~~~g 189 (416)
+++.+++.++.+++.++
T Consensus 140 ~~~~~~~~~~~~~~r~~ 156 (344)
T 1qnr_A 140 AQTQYRKYVQAVVSRYA 156 (344)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhC
Confidence 99999999998887764
|
| >3lpp_A Sucrase-isomaltase; glycoside hydrolase family 31, alpha-glucosidase membrane, disease mutation, disulfide bond, glycoprotein, glycosidase; HET: NAG BMA MAN KTL; 2.15A {Homo sapiens} PDB: 3lpo_A* | Back alignment and structure |
|---|
Probab=96.96 E-value=0.0019 Score=69.42 Aligned_cols=140 Identities=9% Similarity=0.070 Sum_probs=87.3
Q ss_pred CcHHHHHhhhhhHHHcCC--CEEEeCCCCCCCCCCCcccccCCCCCC-CCCCHHHHHHHHHHHHHCCCEEEEEEccccCc
Q 014892 43 DWWRNLERKVPDISKSGF--TSVWLPPATHSFAPEGYLPQNLYSLNS-SYGSEHLLKALLHKMKQHKVRAMADIVINHRV 119 (416)
Q Consensus 43 G~~~gi~~~LdyLk~LGv--~~I~L~Pi~~~~~~~GY~~~d~~~id~-~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~ 119 (416)
.+.+.+.+-++.+++.|| ++|||=-=+-. ++ .| +..|+ +|- +.++||+++|++|+|+++=+-+ |++
T Consensus 330 ~s~~ev~~vv~~~r~~~IP~Dvi~lDidy~~----~~--~d-Ft~D~~~FP---dp~~mv~~Lh~~G~k~vl~idP-~I~ 398 (898)
T 3lpp_A 330 KSLDVVKEVVRRNREAGIPFDTQVTDIDYME----DK--KD-FTYDQVAFN---GLPQFVQDLHDHGQKYVIILDP-AIS 398 (898)
T ss_dssp CSHHHHHHHHHHHHHTTCCCCEEEECGGGSS----TT--CT-TCCCTTTTT---THHHHHHHHHHTTCEEEEEECS-CEE
T ss_pred CCHHHHHHHHHHHHHcCCCceeeEecccccc----CC--Cc-ceEChhhCC---CHHHHHHHHHHCCCEEEEEeCC-ccc
Confidence 478889999999999999 99998321111 11 22 45553 565 7889999999999999996655 355
Q ss_pred CCCCCCCCcccccCC-CCCCCCCCceecCCCCCCCCCCCCCCC-CCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecc
Q 014892 120 GTTQGHGGKYNRYDG-IPLSWDEHAVTSCTGGLGNGSTGDNFH-GVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDF 197 (416)
Q Consensus 120 ~~~~~~~~~~~~f~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~ 197 (416)
.+++.....|..|.. ...++ .....++. .+..+..|+ ...-+|+.||+++++..+.++.+.++.||||+=+|+
T Consensus 399 ~~~~~~~~~Y~~y~eg~~~g~----fvk~~~G~-~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~~giDg~W~Dm 473 (898)
T 3lpp_A 399 IGRRANGTTYATYERGNTQHV----WINESDGS-TPIIGEVWPGLTVYPDFTNPNCIDWWANECSIFHQEVQYDGLWIDM 473 (898)
T ss_dssp CSCCTTSCCCHHHHHHHHHTC----BCBCTTSS-SBCCEEETTEEEECBCTTSHHHHHHHHHHHHHHHHHSCCSEEEECS
T ss_pred cCCcccccccHHHHHHHhCCc----EEECCCCC-ceeEEEecCCCccccCCCCHHHHHHHHHHHHHHHhcCCccEEEEeC
Confidence 544321223333221 00000 01111110 111111121 233478999999999999999888789999999997
Q ss_pred c
Q 014892 198 A 198 (416)
Q Consensus 198 a 198 (416)
.
T Consensus 474 n 474 (898)
T 3lpp_A 474 N 474 (898)
T ss_dssp T
T ss_pred C
Confidence 5
|
| >3vmn_A Dextranase; TIM barrel, immunoglobrin fold, greek-KEY-motif, glycoside H family 66, hydrolase; 1.60A {Streptococcus mutans} PDB: 3vmo_A* 3vmp_A* | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0085 Score=61.02 Aligned_cols=143 Identities=15% Similarity=0.035 Sum_probs=79.4
Q ss_pred HHhhhhhHHHcCCCEEEeCCCCCCC-CCC----CcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccccCcCC-
Q 014892 48 LERKVPDISKSGFTSVWLPPATHSF-APE----GYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGT- 121 (416)
Q Consensus 48 i~~~LdyLk~LGv~~I~L~Pi~~~~-~~~----GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~- 121 (416)
-.+.|+.|+.+-||+|++==.+-.- .+. .++ ..|-.+..+-=..+-+|.+|++||+.||+-|.=.-+.-...+
T Consensus 142 ~~~~i~~L~~yHIN~~QFYDW~yrHh~P~~~~~~~~-~~W~D~~~R~i~~~tVk~yI~~ah~~gm~aM~YnmiYaA~~~~ 220 (643)
T 3vmn_A 142 YYRELEQMKNMNINSYFFYDVYKSATNPFPNVPKFD-QSWNWWSHSQVETDAVKALVNRVHQTGAVAMLYNMILAQNANE 220 (643)
T ss_dssp HHHHHHHHHHTTCCEEEETTCCSBTTBCSCSSSEEE-CTTCTTTCCEEEHHHHHHHHHHHHHTTCEEEEEEESSEEETTS
T ss_pred hHHHHHHHHhcCcCeEEeeeecccccCcCCCCCccc-cccccccCCEehHHHHHHHHHHHHHcCchhhhhHhhhccccCc
Confidence 3577889999999999974222110 000 011 112233333334688999999999999999974333322222
Q ss_pred CCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEeccc
Q 014892 122 TQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFA 198 (416)
Q Consensus 122 ~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a 198 (416)
..+....+.-|.....++... +......-+..+.+--+|-.+|+.|++|++.+...++.+|+|||.+|..
T Consensus 221 ~~g~~~~~~~y~~~~~~~g~~-------~~~~~~~~~g~p~~~~~nP~np~wq~yI~~~~~dvv~~~dfDG~HiD~l 290 (643)
T 3vmn_A 221 TAVLPDTEYIYNYETGGYGQN-------GQVMTYSIDDKPLQYYYNPLSKSWQNYISNAMAQAMKNGGFDGWQGDTI 290 (643)
T ss_dssp CCSSCGGGBCEESSSBTTBST-------TSBCEEEETTEEEEEEBCTTCHHHHHHHHHHHHHHHHHHTCCEEEEECS
T ss_pred ccCCcchhhhhcccccccccc-------CccceeccCCCceEEEECCCCHHHHHHHHHHHHHHHHhCCCceEeeccc
Confidence 111111111111000001100 0000000000111233688999999999999999999999999999975
|
| >3l4y_A Maltase-glucoamylase, intestinal; glycoside hydrolase family 31, cell membrane, disulfide bond, glycoprotein, glycosidase, hydrolase, membrane; HET: NR4 NAG; 1.80A {Homo sapiens} PDB: 3l4u_A* 3l4v_A* 3l4w_A* 3l4x_A* 3l4t_A* 3l4z_A* 2qmj_A* 2qly_A* 3ctt_A* | Back alignment and structure |
|---|
Probab=96.62 E-value=0.004 Score=66.74 Aligned_cols=139 Identities=10% Similarity=0.105 Sum_probs=84.0
Q ss_pred CcHHHHHhhhhhHHHcCC--CEEEeCCCCCCCCCCCcccccCCCCCC-CCCCHHHHHHHHHHHHHCCCEEEEEEccccCc
Q 014892 43 DWWRNLERKVPDISKSGF--TSVWLPPATHSFAPEGYLPQNLYSLNS-SYGSEHLLKALLHKMKQHKVRAMADIVINHRV 119 (416)
Q Consensus 43 G~~~gi~~~LdyLk~LGv--~~I~L~Pi~~~~~~~GY~~~d~~~id~-~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~ 119 (416)
.+.+.+.+-++..++.|| ++|||=-=+- .++ .| |..|+ +|- +.++||+++|++|+|+|+=+-+ |++
T Consensus 302 ~s~~ev~~vv~~~r~~~IP~Dvi~lDidy~----~~~--~d-Ft~D~~~FP---dp~~mv~~Lh~~G~k~v~~idP-~I~ 370 (875)
T 3l4y_A 302 GTLDNMREVVERNRAAQLPYDVQHADIDYM----DER--RD-FTYDSVDFK---GFPEFVNELHNNGQKLVIIVDP-AIS 370 (875)
T ss_dssp CSHHHHHHHHHHHHHTTCCCCEEEECGGGS----BTT--BT-TCCCTTTTT---THHHHHHHHHHTTCEEEEEECS-CEE
T ss_pred CCHHHHHHHHHHHHhcCCCCceEEEccchh----cCC--Cc-eeeChhhCC---CHHHHHHHHHHCCCEEEEEeCC-ccc
Confidence 478889999999999998 9999732111 111 23 45564 665 4889999999999999995444 344
Q ss_pred CCCCCCCCcccccCC-CCCCCCCCceecCCCCCCCCCCCCCCC-CCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecc
Q 014892 120 GTTQGHGGKYNRYDG-IPLSWDEHAVTSCTGGLGNGSTGDNFH-GVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDF 197 (416)
Q Consensus 120 ~~~~~~~~~~~~f~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~ 197 (416)
.+.. ....|..|.. ...++ .....+|.. +..+..|+ ...-+|+.||++++...+.++.+..+.||||+=+|+
T Consensus 371 ~~s~-~~~~y~~y~eg~~~g~----fvk~~dG~~-~~~g~~WpG~~~~pDFtnP~a~~WW~~~~k~~~~~~gidg~W~Dm 444 (875)
T 3l4y_A 371 NNSS-SSKPYGPYDRGSDMKI----WVNSSDGVT-PLIGEVWPGQTVFPDYTNPNCAVWWTKEFELFHNQVEFDGIWIDM 444 (875)
T ss_dssp CCCC-SSSCCHHHHHHHHHTC----BCBCTTSSS-BCCEEETTEEEECBCTTSHHHHHHHHHHHHHHHTTSCCSEEEECS
T ss_pred cCcc-cccccHHHHHHHHCCe----EEECCCCCc-ceEEEecCCCccCcCCCCHHHHHHHHHHHHHHHhhcCCcEEEEcC
Confidence 4331 1112322211 00000 011111110 01111121 123368899999999999999888789999999997
Q ss_pred c
Q 014892 198 A 198 (416)
Q Consensus 198 a 198 (416)
.
T Consensus 445 n 445 (875)
T 3l4y_A 445 N 445 (875)
T ss_dssp T
T ss_pred C
Confidence 5
|
| >2f2h_A Putative family 31 glucosidase YICI; BETA8alpha8 barrel, hydrolase; HET: MPO XTG; 1.95A {Escherichia coli} SCOP: b.150.1.1 b.30.5.11 b.71.1.4 c.1.8.13 PDB: 1xsj_A 1xsi_A 1xsk_A* 1we5_A* | Back alignment and structure |
|---|
Probab=96.29 E-value=0.075 Score=56.42 Aligned_cols=136 Identities=10% Similarity=0.030 Sum_probs=82.6
Q ss_pred cHHHHHhhhhhHHHcCC--CEEEeCCCCCCCCCCCcccccCCCCCC-CCCCHHHHHHHHHHHHHCCCEEEEEEccccCcC
Q 014892 44 WWRNLERKVPDISKSGF--TSVWLPPATHSFAPEGYLPQNLYSLNS-SYGSEHLLKALLHKMKQHKVRAMADIVINHRVG 120 (416)
Q Consensus 44 ~~~gi~~~LdyLk~LGv--~~I~L~Pi~~~~~~~GY~~~d~~~id~-~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~ 120 (416)
+-+.+.+-++.+++.|| +.|||=--+-. +|.-.| +..|+ +|-.+ ++||+++|++|+|+++=+-+ |++.
T Consensus 282 ~e~~v~~v~~~~r~~~IP~dvi~lD~~w~~----~~~w~d-ft~d~~~FPdp---~~mv~~Lh~~G~k~~l~i~P-~I~~ 352 (773)
T 2f2h_A 282 DEATVNSFIDGMAERNLPLHVFHFDCFWMK----AFQWCD-FEWDPLTFPDP---EGMIRRLKAKGLKICVWINP-YIGQ 352 (773)
T ss_dssp CHHHHHHHHHHHHHTTCCCCEEEECGGGBC----TTCCSS-CCBCTTTCSCH---HHHHHHHHHTTCEEEEEECS-EECT
T ss_pred CHHHHHHHHHHHHHcCCCeeEEEECccccc----cccccc-ceEChhhCCCH---HHHHHHHHHCCCEEEEEecC-CcCC
Confidence 34667778888888887 88887432221 122224 44553 56554 78999999999999986655 5555
Q ss_pred CCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCC-CCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccC
Q 014892 121 TTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTG-DNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFAR 199 (416)
Q Consensus 121 ~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~ 199 (416)
+++.++..-. ..| +....++. +..+ ++.....-+|+.||++++...+.++.++ +.|||||-+|...
T Consensus 353 ~s~~y~e~~~------~g~----~vk~~~G~--~~~~~~w~g~~~~~DftnP~a~~ww~~~~~~l~-d~Gvd~~w~D~~e 419 (773)
T 2f2h_A 353 KSPVFKELQE------KGY----LLKRPDGS--LWQWDKWQPGLAIYDFTNPDACKWYADKLKGLV-AMGVDCFKTDFGE 419 (773)
T ss_dssp TSTTHHHHHH------HTC----BCBCTTSS--BCCBSSSSTTBEEBCTTSHHHHHHHHHHHHHHH-HTTCCEEEECCCC
T ss_pred CCHHHHHHHH------CCc----eeECCCCC--eeeeeecCCCceeeCCCCHHHHHHHHHHHHHHH-hcCCCEEEccCCC
Confidence 4432110000 000 00001111 1111 1112334579999999999999999988 8999999999865
Q ss_pred CC
Q 014892 200 GY 201 (416)
Q Consensus 200 ~~ 201 (416)
.+
T Consensus 420 ~~ 421 (773)
T 2f2h_A 420 RI 421 (773)
T ss_dssp CC
T ss_pred CC
Confidence 43
|
| >1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A* | Back alignment and structure |
|---|
Probab=95.85 E-value=0.029 Score=53.42 Aligned_cols=54 Identities=13% Similarity=0.017 Sum_probs=41.3
Q ss_pred hhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccccCcC
Q 014892 50 RKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVG 120 (416)
Q Consensus 50 ~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~ 120 (416)
+-+.-||++|+|+|=|. ++-.+. +.+-+.+.+.++++.|+++||+||+|+ |.++
T Consensus 31 d~~~ilk~~G~N~VRi~-~w~~P~-------------~g~~~~~~~~~~~~~A~~~GlkV~ld~---Hysd 84 (332)
T 1hjs_A 31 PLENILAANGVNTVRQR-VWVNPA-------------DGNYNLDYNIAIAKRAKAAGLGVYIDF---HYSD 84 (332)
T ss_dssp CHHHHHHHTTCCEEEEE-ECSSCT-------------TCTTSHHHHHHHHHHHHHTTCEEEEEE---CCSS
T ss_pred cHHHHHHHCCCCEEEEe-eeeCCC-------------CCcCCHHHHHHHHHHHHHCCCEEEEEe---ccCC
Confidence 34677899999999974 332111 344468999999999999999999997 6654
|
| >2g3m_A Maltase, alpha-glucosidase; hydrolase, glycoside hydrolase family 31, multidomain protein, (beta/alpha)8 barrel, retaining mechanism; 2.55A {Sulfolobus solfataricus} PDB: 2g3n_A* | Back alignment and structure |
|---|
Probab=95.81 E-value=0.025 Score=59.36 Aligned_cols=133 Identities=13% Similarity=0.091 Sum_probs=84.0
Q ss_pred cHHHHHhhhhhHHHcCC--CEEEeCCCCCCCCCCCcccccCCCCC-CCCCCHHHHHHHHHHHHHCCCEEEEEEccccCcC
Q 014892 44 WWRNLERKVPDISKSGF--TSVWLPPATHSFAPEGYLPQNLYSLN-SSYGSEHLLKALLHKMKQHKVRAMADIVINHRVG 120 (416)
Q Consensus 44 ~~~gi~~~LdyLk~LGv--~~I~L~Pi~~~~~~~GY~~~d~~~id-~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~ 120 (416)
+-+.+.+-++.+++.|| ++|||=-=+. .||. | +..| .+|-. .++||+++|++|+|+++=+-+ +++.
T Consensus 188 ~~~ev~~v~~~~~~~~IP~dvi~lD~~y~----~~~~--d-ft~d~~~FPd---p~~mv~~Lh~~G~k~~l~i~P-~I~~ 256 (693)
T 2g3m_A 188 PQDKVVELVDIMQKEGFRVAGVFLDIHYM----DSYK--L-FTWHPYRFPE---PKKLIDELHKRNVKLITIVDH-GIRV 256 (693)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEECGGGS----BTTB--T-TCCCTTTCSC---HHHHHHHHHHTTCEEEEEECS-CEEC
T ss_pred CHHHHHHHHHHHHHcCCCcceEEEeccee----cCCc--c-ceEChhhCCC---HHHHHHHHHHCCCEEEEEecC-cccC
Confidence 57788888889999998 8888853221 1232 3 4555 35654 689999999999999997766 5555
Q ss_pred CCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCC-CCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccC
Q 014892 121 TTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNF-HGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFAR 199 (416)
Q Consensus 121 ~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~ 199 (416)
+. .|..|..... | +....++.. ..+..| ....-+|+.||+++++..+.++.++ +.|||||=+|+..
T Consensus 257 ~~-----~y~~y~e~~~-~----fvk~~~G~~--~~g~~W~g~~~~~Dftnp~a~~ww~~~~~~l~-~~GiDg~w~DmnE 323 (693)
T 2g3m_A 257 DQ-----NYSPFLSGMG-K----FCEIESGEL--FVGKMWPGTTVYPDFFREDTREWWAGLISEWL-SQGVDGIWLDMNE 323 (693)
T ss_dssp CT-----TCHHHHHHTT-S----BCEETTSSB--CEEEETTEEEECBCTTSHHHHHHHHHHHHHHH-TTTCCEEEECSTT
T ss_pred CC-----CcHHHHHHHh-h----eEECCCCCE--EEEEeCCCCeeeeCCCCHHHHHHHHHHHHHHH-hcCCcEEEEecCC
Confidence 31 2222221000 0 011111110 111111 1223478999999999999999988 8899999999875
Q ss_pred C
Q 014892 200 G 200 (416)
Q Consensus 200 ~ 200 (416)
.
T Consensus 324 p 324 (693)
T 2g3m_A 324 P 324 (693)
T ss_dssp T
T ss_pred c
Confidence 4
|
| >3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai} | Back alignment and structure |
|---|
Probab=95.74 E-value=0.021 Score=53.40 Aligned_cols=86 Identities=15% Similarity=0.174 Sum_probs=55.1
Q ss_pred ccCceeEEEeeecC---CC----CCC---cHHHHHhhhhhHHHcCCCEEEe--CCCCCCC---CCCCcccccCCCCCCCC
Q 014892 25 RNGREILFQGFNWE---SC----KHD---WWRNLERKVPDISKSGFTSVWL--PPATHSF---APEGYLPQNLYSLNSSY 89 (416)
Q Consensus 25 ~~~~~~~~q~f~~~---~~----~~G---~~~gi~~~LdyLk~LGv~~I~L--~Pi~~~~---~~~GY~~~d~~~id~~~ 89 (416)
.+|..+.+++..+- .. ..| +.+.+.+.|+.+|++|+|+|=+ ....... ...++... ....-
T Consensus 11 ~nG~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~l~~~k~~G~N~vRv~~~~~~~~~~~~~~~~~~~~----~~~~~ 86 (351)
T 3vup_A 11 LNGQRVFLSGGNLPWMSYAYDFGDGQWQRNKNRIEPEFKKLHDAGGNSMRLWIHIQGETTPAFNDQGFVTG----PDKQG 86 (351)
T ss_dssp ETTEEBCEEEEECCCSSTTCSSSTTHHHHHHHHHHHHHHHHHHTTCCEEEEEEEETTSSSSEECTTSCEEE----SCSSS
T ss_pred ECCEEEEEEEEecCccccccccCcccCcCCHHHHHHHHHHHHHcCCcEEEECcccccccCccccccccccc----ccccH
Confidence 37889999998751 11 111 5566888899999999999865 2111110 11121111 01111
Q ss_pred CCHHHHHHHHHHHHHCCCEEEEEEc
Q 014892 90 GSEHLLKALLHKMKQHKVRAMADIV 114 (416)
Q Consensus 90 Gt~~d~~~Lv~~aH~~Gi~VilD~V 114 (416)
.-.+.+.++++.|.++||+||+|+.
T Consensus 87 ~~~~~~d~~~~~a~~~Gi~vil~~~ 111 (351)
T 3vup_A 87 TMLDDMKDLLDTAKKYNILVFPCLW 111 (351)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHHHHHHCCCeEEEEec
Confidence 2367899999999999999999983
|
| >4ba0_A Alpha-glucosidase, putative, ADG31B; hydrolase; HET: 5GF PGE ARG; 1.85A {Cellvibrio japonicus} PDB: 4b9z_A* 4b9y_A* | Back alignment and structure |
|---|
Probab=95.74 E-value=0.038 Score=58.97 Aligned_cols=137 Identities=11% Similarity=0.022 Sum_probs=82.5
Q ss_pred cHHHHHhhhhhHHHcCC--CEEEeCCCCCCCCCCCcccccCCCCC-CCCCCHHHHHHHHHHHHHCCCEEEEEEccccCcC
Q 014892 44 WWRNLERKVPDISKSGF--TSVWLPPATHSFAPEGYLPQNLYSLN-SSYGSEHLLKALLHKMKQHKVRAMADIVINHRVG 120 (416)
Q Consensus 44 ~~~gi~~~LdyLk~LGv--~~I~L~Pi~~~~~~~GY~~~d~~~id-~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~ 120 (416)
+-+.+.+.++.+++.|| ++|||=--+-...+.+ .-.| +..| .+|-.+ ++|++++|++|+|+++=+-+ |+..
T Consensus 275 s~~ev~~vv~~~r~~~IP~Dvi~lD~dw~g~d~~~-~~gd-ftwd~~~FPdp---~~mv~~Lh~~G~k~vl~i~P-~I~~ 348 (817)
T 4ba0_A 275 SEAETRATVQKYKTEDFPLDTIVLDLYWFGKDIKG-HMGN-LDWDKENFPTP---LDMMADFKQQGVKTVLITEP-FVLT 348 (817)
T ss_dssp SHHHHHHHHHHHHHHTCCCCEEEECGGGSCSSSSS-CTTC-CSCCTTTCSCH---HHHHHHHHHTTCEEEEEECS-EEET
T ss_pred CHHHHHHHHHHHHHhCCCCcEEEEcccccCCcccc-ccCc-cccccccCCCH---HHHHHHHHHCCCEEEEEeCC-CccC
Confidence 67888888999999998 9999864221110000 0112 4455 356654 79999999999999996655 5555
Q ss_pred CCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCC-CCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccC
Q 014892 121 TTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTG-DNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFAR 199 (416)
Q Consensus 121 ~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~ 199 (416)
+++. |..... .+| .....++. +..+ ++.....-+|+.||++|+...+.++.+. +.|||||-+|+..
T Consensus 349 ~s~~----y~e~~~--~g~----~vk~~~G~--~~~~~~w~G~~~~~DftnP~ar~ww~~~~~~l~-~~GvDg~W~DmnE 415 (817)
T 4ba0_A 349 SSKR----WDDAVK--AKA----LAKDPQGQ--PKAFELYFGNGGIIDVFSKEGSRWFSSIYKDLS-KQGVAGWWGDLGE 415 (817)
T ss_dssp TSTT----HHHHHH--TTC----BCBCTTSS--BCCEEETTEEEEEBCTTSHHHHHHHHHHHHHHH-HHTCCEEEECCTT
T ss_pred CcHH----HHHHHh--CCE----EEECCCCC--eEEEEecCCCceeecCCCHHHHHHHHHHHHHHH-hCCCcEEEecCCC
Confidence 4431 110000 000 00001111 1111 1111223378899999999999998887 8999999999764
|
| >2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=95.54 E-value=0.021 Score=54.75 Aligned_cols=60 Identities=15% Similarity=0.108 Sum_probs=43.0
Q ss_pred CCcHHHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCCCCC-CCHHHHHHHHHHHHHCCCEEEEEEccc
Q 014892 42 HDWWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSY-GSEHLLKALLHKMKQHKVRAMADIVIN 116 (416)
Q Consensus 42 ~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~-Gt~~d~~~Lv~~aH~~Gi~VilD~V~N 116 (416)
..+.+...+-|.-.+++|++.|+.+=. .++..- -..+.|++|++.||+.||+||+|+-+.
T Consensus 13 ~~~~~~~~~yi~~a~~~Gf~~IFTSL~---------------~~e~~~~~~~~~~~~l~~~a~~~g~~vi~DIsp~ 73 (372)
T 2p0o_A 13 EEITNDTIIYIKKMKALGFDGIFTSLH---------------IPEDDTSLYRQRLTDLGAIAKAEKMKIMVDISGE 73 (372)
T ss_dssp SCCCHHHHHHHHHHHHTTCCEEEEEEC---------------CC-----CHHHHHHHHHHHHHHHTCEEEEEECHH
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEccCC---------------ccCCChHHHHHHHHHHHHHHHHCCCEEEEECCHH
Confidence 345666667777778899999986422 111111 136889999999999999999999765
|
| >1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A | Back alignment and structure |
|---|
Probab=95.53 E-value=0.043 Score=52.28 Aligned_cols=50 Identities=10% Similarity=0.006 Sum_probs=38.5
Q ss_pred hhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Q 014892 50 RKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADI 113 (416)
Q Consensus 50 ~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~ 113 (416)
+.+.-||++|+|+|=|-. +-.+. +..-+.+.+++++++|+++||+||+|+
T Consensus 31 ~~~~ilk~~G~n~vRlri-~v~P~-------------~g~~d~~~~~~~~~~ak~~Gl~v~ld~ 80 (334)
T 1fob_A 31 ALETILADAGINSIRQRV-WVNPS-------------DGSYDLDYNLELAKRVKAAGMSLYLDL 80 (334)
T ss_dssp CHHHHHHHHTCCEEEEEE-CSCCT-------------TCTTCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hHHHHHHHcCCCEEEEEE-EECCC-------------CCccCHHHHHHHHHHHHHCCCEEEEEe
Confidence 457889999999999822 21111 233458999999999999999999997
|
| >2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A | Back alignment and structure |
|---|
Probab=95.51 E-value=0.026 Score=52.55 Aligned_cols=72 Identities=14% Similarity=0.273 Sum_probs=49.3
Q ss_pred cCceeEEEeeecCCCCCCcHHHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHC
Q 014892 26 NGREILFQGFNWESCKHDWWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQH 105 (416)
Q Consensus 26 ~~~~~~~q~f~~~~~~~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~ 105 (416)
+|..+.++++.+...-...+ ..+.++.||++|+|+|=| |+... ..|. - ...+.++++|+.|.++
T Consensus 13 ~G~~~~lrGvn~~~~w~~~~--~~~~~~~i~~~G~N~VRi-~~~~~---~~~~------~----~~~~~ld~~v~~a~~~ 76 (294)
T 2whl_A 13 NGQPFVMRGINHGHAWYKDT--ASTAIPAIAEQGANTIRI-VLSDG---GQWE------K----DDIDTIREVIELAEQN 76 (294)
T ss_dssp TSCBCCCEEEEECGGGCGGG--HHHHHHHHHHTTCSEEEE-EECCS---SSSC------C----CCHHHHHHHHHHHHTT
T ss_pred CCCEEEEEEeecccccCCcc--hHHHHHHHHHcCCCEEEE-EecCC---CccC------c----cHHHHHHHHHHHHHHC
Confidence 56666666665421000112 456799999999999988 55421 0121 1 3588999999999999
Q ss_pred CCEEEEEE
Q 014892 106 KVRAMADI 113 (416)
Q Consensus 106 Gi~VilD~ 113 (416)
||+||+|+
T Consensus 77 Gi~Vild~ 84 (294)
T 2whl_A 77 KMVAVVEV 84 (294)
T ss_dssp TCEEEEEE
T ss_pred CCEEEEEe
Confidence 99999997
|
| >3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius} | Back alignment and structure |
|---|
Probab=95.46 E-value=0.02 Score=54.88 Aligned_cols=65 Identities=11% Similarity=0.066 Sum_probs=47.8
Q ss_pred HHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCC---CHHHHHHHHHHHHHCCCEEEEEEccc
Q 014892 46 RNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYG---SEHLLKALLHKMKQHKVRAMADIVIN 116 (416)
Q Consensus 46 ~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~G---t~~d~~~Lv~~aH~~Gi~VilD~V~N 116 (416)
++..+.|+.||++|+|+|=|.+.......++= .+.-.+| +.+.++++++.|+++||+|||+.-+.
T Consensus 53 ~~~~~~l~~lk~~g~N~VrL~v~~~~~~~~~~------~~~~~~~~t~~~~~v~~~~~~Ak~~GL~V~l~p~i~ 120 (343)
T 3civ_A 53 DEARASMRALAEQPFNWVTLAFAGLMEHPGDP------AIAYGPPVTVSDDEIASMAELAHALGLKVCLKPTVN 120 (343)
T ss_dssp HHHHHHHHHHHHSSCSEEEEEEEEEESSTTCC------CCBCSTTTBCCHHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred hhHHHHHHHHHHcCCCEEEEEeeecCCCCCCC------cccccCCCCCCHHHHHHHHHHHHHCCCEEEEEEEee
Confidence 46779999999999999999875433221110 0001233 78999999999999999999998775
|
| >3nsx_A Alpha-glucosidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, acarbose; 1.57A {Ruminococcus obeum} PDB: 3ffj_A 3n04_A 3pha_A* 3nuk_A 3nxm_A* 3m46_A 3mkk_A* 3m6d_A* 3nqq_A* 3poc_A* | Back alignment and structure |
|---|
Probab=95.24 E-value=0.084 Score=55.05 Aligned_cols=133 Identities=12% Similarity=0.147 Sum_probs=79.4
Q ss_pred cHHHHHhhhhhHHHcCC--CEEEeCCCCCCCCCCCcccccCCCCCC-CCCCHHHHHHHHHHHHHCCCEEEEEEccccCcC
Q 014892 44 WWRNLERKVPDISKSGF--TSVWLPPATHSFAPEGYLPQNLYSLNS-SYGSEHLLKALLHKMKQHKVRAMADIVINHRVG 120 (416)
Q Consensus 44 ~~~gi~~~LdyLk~LGv--~~I~L~Pi~~~~~~~GY~~~d~~~id~-~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~ 120 (416)
+-+.+.+.++.+++.|| ++|||=.=+-. +| .| +..|+ +|- +.++||+++|++|+|+|+=+-+ ++..
T Consensus 176 ~~~~v~~v~~~~~~~~IP~dvi~lD~dy~~----~~--~~-ft~d~~~FP---dp~~mv~~Lh~~G~k~v~~idP-~i~~ 244 (666)
T 3nsx_A 176 TKEDFRAVAKGYRENHIPIDMIYMDIDYMQ----DF--KD-FTVNEKNFP---DFPEFVKEMKDQELRLIPIIDA-GVKV 244 (666)
T ss_dssp SHHHHHHHHHHHHHTTCCCCEEEECGGGSS----TT--CT-TCCCTTTCT---THHHHHHHHHTTTCEEEEEEES-CEEC
T ss_pred CHHHHHHHHHHHHhcCCCcceEEEecHHHH----hh--cc-cccChhhCC---CHHHHHHHHHHcCceEEeeecc-ceee
Confidence 67788888888898887 88888532221 22 22 45664 565 5889999999999999963322 2221
Q ss_pred CCCCCCCcccccCCC-CCCCCCCceecCCCCCCCCCCCCCCC-CCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEeccc
Q 014892 121 TTQGHGGKYNRYDGI-PLSWDEHAVTSCTGGLGNGSTGDNFH-GVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFA 198 (416)
Q Consensus 121 ~~~~~~~~~~~f~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a 198 (416)
+ +.|..|... ..++ +....++. +..+..|+ ...-+|+.||++|+...+.++.+. +.|||||=+|+.
T Consensus 245 ~-----~~~~~y~e~~~~g~----fvk~~~G~--~~~g~~WpG~~~~pDftnp~a~~ww~~~~~~~~-~~Gidg~W~Dmn 312 (666)
T 3nsx_A 245 E-----KGYEVYEEGVKNNY----FCKREDGS--DFVAAVWPGDTHFPDMLNPEARKWFGDKYRFLI-DQGIEGFWNDMN 312 (666)
T ss_dssp C-----TTCHHHHHHHHTTC----BCBCTTSC--BCCEEETTEEEECBCTTSHHHHHHHHHTTHHHH-TTTCCEEEEEST
T ss_pred e-----cCchHHhhhcccCc----cccCCCCC--cceEEecCCccCCccccCHHHHHHhhhhhhHHH-hccchhhhhccC
Confidence 1 111111100 0000 01111111 11111111 122368899999999999888887 899999999987
Q ss_pred C
Q 014892 199 R 199 (416)
Q Consensus 199 ~ 199 (416)
.
T Consensus 313 E 313 (666)
T 3nsx_A 313 E 313 (666)
T ss_dssp T
T ss_pred C
Confidence 5
|
| >1x1n_A 4-alpha-glucanotransferase; disproportionating enzyme, amylomaltase, D-enzyme; 1.80A {Solanum tuberosum} SCOP: c.1.8.1 | Back alignment and structure |
|---|
Probab=95.21 E-value=0.16 Score=51.06 Aligned_cols=48 Identities=10% Similarity=-0.011 Sum_probs=37.8
Q ss_pred ccCceeEEEeeecCC-CCCCcHHHHH-hhhhhHHHcCCCEEEeCCCCCCC
Q 014892 25 RNGREILFQGFNWES-CKHDWWRNLE-RKVPDISKSGFTSVWLPPATHSF 72 (416)
Q Consensus 25 ~~~~~~~~q~f~~~~-~~~G~~~gi~-~~LdyLk~LGv~~I~L~Pi~~~~ 72 (416)
....|+++|+|-=.. ..=|||.... +-++.+++.|.+.++|+|+.+..
T Consensus 25 ~R~~Gill~l~SL~s~~GIGdfgd~a~~fvd~la~~G~~~~qilPL~~t~ 74 (524)
T 1x1n_A 25 RRRAGILLHPTSFPGPYGIGDLGPQAFKFLDWLHLAGCSLWQVLPLVPPG 74 (524)
T ss_dssp CCEEEEECCGGGSCCTTSSCCSSHHHHHHHHHHHHHTCCEEECCCCSCBC
T ss_pred CCceEEEecccccCCCCCCccHHHHHHHHHHHHHHcCCCEEeecCCCCCC
Confidence 445688999987432 2238998755 99999999999999999998764
|
| >1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=95.16 E-value=0.12 Score=50.72 Aligned_cols=58 Identities=17% Similarity=0.298 Sum_probs=39.7
Q ss_pred HhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCCC-CCC-CHHHHHHHHHHHHHCCCEEEEEEc
Q 014892 49 ERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNS-SYG-SEHLLKALLHKMKQHKVRAMADIV 114 (416)
Q Consensus 49 ~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~-~~G-t~~d~~~Lv~~aH~~Gi~VilD~V 114 (416)
.+.++.||++|+|+|=| ||.- +.+.+.+ -+| ..| ..+.|+++|+.|+++||+||||+-
T Consensus 76 e~d~~~i~~~G~N~VRi-pi~~----~~~~~~~---~~py~~~~~l~~ld~vv~~a~~~Gi~VilDlH 135 (408)
T 1h4p_A 76 EQDFANIASQGFNLVRI-PIGY----WAFQILD---DDPYVSGLQESYLDQAIGWARNNSLKVWVDLH 135 (408)
T ss_dssp HHHHHHHHHTTCCEEEE-EEEG----GGTCCCT---TCCCCCSSHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHCCCCEEEc-cCCH----HHcccCC---CCCCccccHHHHHHHHHHHHHHCCCEEEEECC
Confidence 45688999999999988 3321 0000000 001 114 578899999999999999999984
|
| >2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=95.01 E-value=0.057 Score=51.40 Aligned_cols=82 Identities=21% Similarity=0.333 Sum_probs=54.2
Q ss_pred cCceeEEEeeec--CCC----CCC-c---HHHHHhhhhhHHHcCCCEEEeCCCCCC---C--CCCCcccccCCCCCCCCC
Q 014892 26 NGREILFQGFNW--ESC----KHD-W---WRNLERKVPDISKSGFTSVWLPPATHS---F--APEGYLPQNLYSLNSSYG 90 (416)
Q Consensus 26 ~~~~~~~q~f~~--~~~----~~G-~---~~gi~~~LdyLk~LGv~~I~L~Pi~~~---~--~~~GY~~~d~~~id~~~G 90 (416)
+|..+.++++.+ ... ..| + ..-+.+.++.+|++|+|+|=+.-.++. + ...|+ .+..++ .
T Consensus 15 nG~~~~~~GvN~~w~~~~~~~~~~~~~~~~~~~~~d~~~~k~~G~N~vR~~~~~~~~~~p~~~~~g~----~~~~~~--~ 88 (353)
T 2c0h_A 15 NGHHIFLSGANQAWVNYARDFGHNQYSKGKSTFESTLSDMQSHGGNSVRVWLHIEGESTPEFDNNGY----VTGIDN--T 88 (353)
T ss_dssp TTEEECEEEEECCCSSTTCSSSTTCHHHHHHHHHHHHHHHHHTTCCEEEEEEEETTSSSSEECTTSC----EEECCT--T
T ss_pred CCeEEEEEEEEHHhhhccccccCCccccchHHHHHHHHHHHHcCCCEEEEceecCCccCccccCCCc----cccCCH--H
Confidence 688888888874 211 112 2 456778899999999999866311111 0 01121 112233 3
Q ss_pred CHHHHHHHHHHHHHCCCEEEEEE
Q 014892 91 SEHLLKALLHKMKQHKVRAMADI 113 (416)
Q Consensus 91 t~~d~~~Lv~~aH~~Gi~VilD~ 113 (416)
..+.+.++++.|+++||+||+|+
T Consensus 89 ~~~~ld~~~~~a~~~Gi~vil~l 111 (353)
T 2c0h_A 89 LISDMRAYLHAAQRHNILIFFTL 111 (353)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCEEEEEc
Confidence 47789999999999999999999
|
| >1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A* | Back alignment and structure |
|---|
Probab=94.94 E-value=0.078 Score=51.67 Aligned_cols=60 Identities=12% Similarity=0.121 Sum_probs=42.8
Q ss_pred HhhhhhHHHcCCCEEEeCCCCCCCC---CCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccccCcC
Q 014892 49 ERKVPDISKSGFTSVWLPPATHSFA---PEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVG 120 (416)
Q Consensus 49 ~~~LdyLk~LGv~~I~L~Pi~~~~~---~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~ 120 (416)
.+.+.-||++|+|+|=| +|+-.+. ..+|.. ...+.+.+.++++.|+++||+||+|+ |.++
T Consensus 51 ~d~~~ilk~~G~N~VRl-rvwv~p~~~~g~~y~~--------g~~d~~~~~~~a~~Ak~~GLkVlldf---HysD 113 (399)
T 1ur4_A 51 QDIFKTLKEAGVNYVRV-RIWNDPYDANGNGYGG--------GNNDLEKAIQIGKRATANGMKLLADF---HYSD 113 (399)
T ss_dssp CCHHHHHHHTTCCEEEE-EECSCCBCTTCCBCST--------TCCCHHHHHHHHHHHHHTTCEEEEEE---CSSS
T ss_pred chHHHHHHHCCCCEEEE-eeecCCcccccCccCC--------CCCCHHHHHHHHHHHHHCCCEEEEEe---ccCC
Confidence 34688899999999997 3342221 122322 11358999999999999999999998 6654
|
| >1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A* | Back alignment and structure |
|---|
Probab=94.93 E-value=0.046 Score=51.07 Aligned_cols=71 Identities=20% Similarity=0.406 Sum_probs=48.3
Q ss_pred cCceeEEEeeecCCCCCCcHHHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHC
Q 014892 26 NGREILFQGFNWESCKHDWWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQH 105 (416)
Q Consensus 26 ~~~~~~~q~f~~~~~~~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~ 105 (416)
+|..+.+++..+-.. ++....+.++.||++|+|+|=| |+.... .| ..+ ..+.++++|+.|.++
T Consensus 15 nG~~~~l~Gvn~~~~---w~~~~~~~~~~lk~~G~N~VRi-~~~~~~---~w------~~~----~~~~ld~~v~~a~~~ 77 (302)
T 1bqc_A 15 NGQEFIIRGVSHPHN---WYPQHTQAFADIKSHGANTVRV-VLSNGV---RW------SKN----GPSDVANVISLCKQN 77 (302)
T ss_dssp TSCBCCCEEEEECTT---TCTTCTTHHHHHHHTTCSEEEE-EECCSS---SS------CCC----CHHHHHHHHHHHHHT
T ss_pred CCCEEEEEEeecccc---cCcchHHHHHHHHHcCCCEEEE-EccCCc---cc------CCC----CHHHHHHHHHHHHHC
Confidence 677777777764210 1111126788999999999988 453210 11 111 368899999999999
Q ss_pred CCEEEEEE
Q 014892 106 KVRAMADI 113 (416)
Q Consensus 106 Gi~VilD~ 113 (416)
||+||+|+
T Consensus 78 Gi~Vild~ 85 (302)
T 1bqc_A 78 RLICMLEV 85 (302)
T ss_dssp TCEEEEEE
T ss_pred CCEEEEEe
Confidence 99999996
|
| >1esw_A Amylomaltase; (beta,alpha)8-barrel, glucanotransferase, alpha-amylase FAMI acarbose, transferase; HET: ACR; 1.90A {Thermus aquaticus} SCOP: c.1.8.1 PDB: 1cwy_A* 1fp8_A 1fp9_A 2owc_A* 2oww_A* 2owx_A* 2x1i_A* | Back alignment and structure |
|---|
Probab=94.88 E-value=0.18 Score=50.44 Aligned_cols=55 Identities=7% Similarity=-0.071 Sum_probs=39.1
Q ss_pred CceeEEEeeecCC-CCCCcHHHHH-hhhhhHHHcCCCEEEeCCCCCCC-CCCCccccc
Q 014892 27 GREILFQGFNWES-CKHDWWRNLE-RKVPDISKSGFTSVWLPPATHSF-APEGYLPQN 81 (416)
Q Consensus 27 ~~~~~~q~f~~~~-~~~G~~~gi~-~~LdyLk~LGv~~I~L~Pi~~~~-~~~GY~~~d 81 (416)
..|+++|++-=.. ..=|||.... +-++.+++.|.+.++|+|+.+.. ++..|.+.+
T Consensus 6 ~~Gill~l~SL~s~~GIGdfgd~a~~~vd~la~~G~~~~qilPL~pt~~~~SPY~~~S 63 (500)
T 1esw_A 6 AFGLLLHPTSLPGPYGVGVLGREARDFLRFLKEAGGRYWQVLPLGPTGYGDSPYQSFS 63 (500)
T ss_dssp EEEEECCGGGSCCSSSSCCSSHHHHHHHHHHHHTTCCEEECCCCSCBCTTCCTTSBSC
T ss_pred ceEEEecchhcCCCCCCcchHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCCcCccc
Confidence 3477888876332 2238998755 99999999999999999999753 223455533
|
| >3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125} | Back alignment and structure |
|---|
Probab=94.73 E-value=0.14 Score=50.51 Aligned_cols=137 Identities=10% Similarity=0.036 Sum_probs=77.6
Q ss_pred cHHHHHhhhhhH----HHcCCCEEEeCCCCCCC--CCCCccc---------ccCCCCC-CCCCC---HHHHHHHHHHHHH
Q 014892 44 WWRNLERKVPDI----SKSGFTSVWLPPATHSF--APEGYLP---------QNLYSLN-SSYGS---EHLLKALLHKMKQ 104 (416)
Q Consensus 44 ~~~gi~~~LdyL----k~LGv~~I~L~Pi~~~~--~~~GY~~---------~d~~~id-~~~Gt---~~d~~~Lv~~aH~ 104 (416)
+-+.|.+.++.+ +++|+..|.|==-+... ..++|.. -+ ..++ .+|-+ -..++.|++.+|+
T Consensus 27 ~e~~i~~~ad~~~~gl~~~G~~~~~iDDgW~~~~~~~~~y~~~~~~~~d~~G~-~~~~~~kFP~~~~~~Gl~~l~~~ih~ 105 (433)
T 3cc1_A 27 TEEEVLGNAEYMANHLKKYGWEYIVVDIQWYEPTANSSAYNPFAPLCMDEYGR-LLPATNRFPSAKNGAGFKPLSDAIHD 105 (433)
T ss_dssp CHHHHHHHHHHHHHHTGGGTCCEEEECSCTTCCCTTSTTCCTTSCSCBCTTSC-BCCCTTTCGGGTTTTTTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcchhhCCeEEEECCCcCCCCCcccccccccccccCCCCC-EeECCccCCCcccCCCHHHHHHHHHH
Confidence 567788888888 99999998773322221 1234421 11 1122 22321 1169999999999
Q ss_pred CCCEEEEEEccc----cCcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCC-CCCCcCCCCCHHHHHHHHH
Q 014892 105 HKVRAMADIVIN----HRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNF-HGVPNIDHTQHFVRKDIIA 179 (416)
Q Consensus 105 ~Gi~VilD~V~N----H~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~dln~~~~~v~~~l~~ 179 (416)
+|||+=+=+.+. ++..+++.... +|....+.. + ...|.+ ..+.-||+.+|++++++..
T Consensus 106 ~Glk~Giw~~p~i~~~~v~~~s~~~~~----------~~~~~di~~-~------~~~~~~~~~~~~lD~~~p~~~~~~~~ 168 (433)
T 3cc1_A 106 LGLKFGIHIMRGIPRQAVYENSPVLGS----------TKTAREIAH-T------NSICPWNTDMYGVDPTKEGAQSYYNS 168 (433)
T ss_dssp TTCEEEEEEESSEEHHHHHHTCBCTTS----------SCBHHHHEE-T------TCCBTTBTTEEEECTTSTTHHHHHHH
T ss_pred cCCeeEEEeCCCCchhccCCCCccccc----------cceeccccc-C------CcccCCCCCceeecCCCHHHHHHHHH
Confidence 999975433222 11222221111 111000000 0 001111 2233489999999999988
Q ss_pred HHHHHHHhcCCCeEEecccC
Q 014892 180 WLRWLRNTVGFQDFRFDFAR 199 (416)
Q Consensus 180 ~~~~w~~~~gvDGfRlD~a~ 199 (416)
.++.+. +.|||.+.+|...
T Consensus 169 ~~~~l~-~~GvDyvK~D~~~ 187 (433)
T 3cc1_A 169 LFELYA-QWGVDFVKVDDIA 187 (433)
T ss_dssp HHHHHH-HTTCCEEEEESCS
T ss_pred HHHHHH-HcCCCEEEeCCcc
Confidence 888875 9999999999854
|
| >1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A | Back alignment and structure |
|---|
Probab=94.66 E-value=0.045 Score=52.35 Aligned_cols=86 Identities=22% Similarity=0.440 Sum_probs=56.3
Q ss_pred ccCceeEEEeeecCCC------CCCcH-HHHHhhhhhHHHcCCCEEEeCCCC-----CCCCCCCcccccCCCCCCCCC--
Q 014892 25 RNGREILFQGFNWESC------KHDWW-RNLERKVPDISKSGFTSVWLPPAT-----HSFAPEGYLPQNLYSLNSSYG-- 90 (416)
Q Consensus 25 ~~~~~~~~q~f~~~~~------~~G~~-~gi~~~LdyLk~LGv~~I~L~Pi~-----~~~~~~GY~~~d~~~id~~~G-- 90 (416)
.+|..+.+++..|--. .+|.+ .-+.+.++.||++|+|+|=|. +. +...... .|+...+|.+.
T Consensus 16 ~~G~~~~l~GvN~~g~~~~~~~~~g~~~~~~~~~~~~~~~~G~n~vRi~-~~~~~~~~~~~~~~---~~~~~~np~~~g~ 91 (358)
T 1ece_A 16 ANNVPVRIAGINWFGFETCNYVVHGLWSRDYRSMLDQIKSLGYNTIRLP-YSDDILKPGTMPNS---INFYQMNQDLQGL 91 (358)
T ss_dssp TTSCEECCEEEECCCBTTTTCSCTTTTTSCHHHHHHHHHHTTCCEEEEE-EEGGGGSTTCCCCS---CCCSSSCTTTTTC
T ss_pred CCCCEEEEEEEecCCcCccccCccchhhchHHHHHHHHHHcCCCEEEee-ccHHHhcCCCCCcc---ccccccCccccCc
Confidence 3677888888876311 12221 225788999999999999774 32 1111111 22222455543
Q ss_pred -CHHHHHHHHHHHHHCCCEEEEEEc
Q 014892 91 -SEHLLKALLHKMKQHKVRAMADIV 114 (416)
Q Consensus 91 -t~~d~~~Lv~~aH~~Gi~VilD~V 114 (416)
..+-++++|+.|.++||+||+|+-
T Consensus 92 ~~~~~ld~~v~~a~~~Gi~vild~h 116 (358)
T 1ece_A 92 TSLQVMDKIVAYAGQIGLRIILDRH 116 (358)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred cHHHHHHHHHHHHHHCCCEEEEecC
Confidence 478899999999999999999985
|
| >3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus} | Back alignment and structure |
|---|
Probab=94.64 E-value=0.063 Score=51.35 Aligned_cols=73 Identities=14% Similarity=0.279 Sum_probs=49.2
Q ss_pred cCceeEEEeeecCCCCCCcHHHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHC
Q 014892 26 NGREILFQGFNWESCKHDWWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQH 105 (416)
Q Consensus 26 ~~~~~~~q~f~~~~~~~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~ 105 (416)
+|..+.+++..+...-.+.. ..+.++.||++|+|+|=+ |+... ..| . + ...+.++++|+.|.++
T Consensus 36 nG~~~~lrGvn~~~~~~~~~--~~~~i~~lk~~G~N~VRi-p~~~~---~~~------~--~--~~l~~ld~~v~~a~~~ 99 (345)
T 3jug_A 36 NGQPFVMKGINHGHAWYKDT--ASTAIPAIAEQGANTIRI-VLSDG---GQW------E--K--DDIDTVREVIELAEQN 99 (345)
T ss_dssp TSCBCCCEEEEECGGGCGGG--HHHHHHHHHHTTCSEEEE-EECCS---SSS------C--C--CCHHHHHHHHHHHHTT
T ss_pred CCCEEEEecccccccccChH--HHHHHHHHHHcCCCEEEE-EecCC---Ccc------C--H--HHHHHHHHHHHHHHHC
Confidence 56666666665321101111 246789999999999988 55321 111 1 1 2589999999999999
Q ss_pred CCEEEEEEc
Q 014892 106 KVRAMADIV 114 (416)
Q Consensus 106 Gi~VilD~V 114 (416)
||+||+|+-
T Consensus 100 GiyVIlDlH 108 (345)
T 3jug_A 100 KMVAVVEVH 108 (345)
T ss_dssp TCEEEEEEC
T ss_pred CCEEEEEec
Confidence 999999983
|
| >1tz7_A 4-alpha-glucanotransferase; (beta, alpha)8- barrel; 2.15A {Aquifex aeolicus} SCOP: c.1.8.1 | Back alignment and structure |
|---|
Probab=94.29 E-value=0.24 Score=49.52 Aligned_cols=61 Identities=16% Similarity=0.105 Sum_probs=43.6
Q ss_pred cCceeEEEeeecCC-CCCCcHHHHH-hhhhhHHHcCCCEEEeCCCCCCC---CCCCcccccCCCCC
Q 014892 26 NGREILFQGFNWES-CKHDWWRNLE-RKVPDISKSGFTSVWLPPATHSF---APEGYLPQNLYSLN 86 (416)
Q Consensus 26 ~~~~~~~q~f~~~~-~~~G~~~gi~-~~LdyLk~LGv~~I~L~Pi~~~~---~~~GY~~~d~~~id 86 (416)
...|+++|+|-=.. ..=|||.... +-++.+++.|.+.++|+|+.+.. ++..|.+.+-++.+
T Consensus 22 R~~Gill~l~SL~s~~GIGdfgd~a~~~vd~la~~G~~~~qilPL~pt~p~~~~SPY~~~S~fa~N 87 (505)
T 1tz7_A 22 RLAGILLHVTSLPSPYGIGDLGKEAYRFLDFLKECGFSLWQVLPLNPTSLEAGNSPYSSNSLFAGN 87 (505)
T ss_dssp CEEEEECCGGGSCCSSSSCCSSHHHHHHHHHHHHHTCCEEECCCCSCCCGGGTTCTTSCSCSSSCC
T ss_pred cceEEEecccccCCCCCCccHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCCCCcCcccccccc
Confidence 34578888886432 2238998755 99999999999999999999764 23466665444433
|
| >1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3 | Back alignment and structure |
|---|
Probab=94.26 E-value=0.08 Score=52.81 Aligned_cols=72 Identities=13% Similarity=0.238 Sum_probs=50.0
Q ss_pred cCceeEEEeeecCCCCCCcHHHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHC
Q 014892 26 NGREILFQGFNWESCKHDWWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQH 105 (416)
Q Consensus 26 ~~~~~~~q~f~~~~~~~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~ 105 (416)
+|..++++++.+...-...+ ..+.++.||++|+|+|=| |+... ..|. + ...+.++++|+.|.++
T Consensus 21 nG~~v~lrGvN~~~~W~~~~--~~~di~~ik~~G~N~VRi-pv~~g---~~~~--------~--~~l~~ld~vv~~a~~~ 84 (464)
T 1wky_A 21 NGNPFVMRGINHGHAWYKDQ--ATTAIEGIANTGANTVRI-VLSDG---GQWT--------K--DDIQTVRNLISLAEDN 84 (464)
T ss_dssp TSCBCCCEEEEECGGGCGGG--HHHHHHHHHTTTCSEEEE-EECCS---SSSC--------C--CCHHHHHHHHHHHHHT
T ss_pred CCCEEEEEEEEeCcccCCcc--hHHHHHHHHHCCCCEEEE-EcCCC---CccC--------H--HHHHHHHHHHHHHHHC
Confidence 56677777776421001112 456889999999999988 55411 0111 1 3588999999999999
Q ss_pred CCEEEEEE
Q 014892 106 KVRAMADI 113 (416)
Q Consensus 106 Gi~VilD~ 113 (416)
||+||+|+
T Consensus 85 Gl~VIlDl 92 (464)
T 1wky_A 85 NLVAVLEV 92 (464)
T ss_dssp TCEEEEEE
T ss_pred CCEEEEEe
Confidence 99999997
|
| >2xvl_A Alpha-xylosidase, putative, XYL31A; hydrolase, glycosyl hydrolase family 31, (beta/alpha)8 barre; HET: PXN; 2.30A {Cellvibrio japonicus} PDB: 2xvg_A* 2xvk_A* | Back alignment and structure |
|---|
Probab=94.25 E-value=0.1 Score=56.79 Aligned_cols=132 Identities=14% Similarity=0.102 Sum_probs=74.6
Q ss_pred cHHHHHhhhhhHHHcCCC--EEEeCCCCCCCCCCCcccc---cCCCCCC-CCCCHHHHHHHHHHHHHCCCEEEEEEcccc
Q 014892 44 WWRNLERKVPDISKSGFT--SVWLPPATHSFAPEGYLPQ---NLYSLNS-SYGSEHLLKALLHKMKQHKVRAMADIVINH 117 (416)
Q Consensus 44 ~~~gi~~~LdyLk~LGv~--~I~L~Pi~~~~~~~GY~~~---d~~~id~-~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH 117 (416)
+-+.+.+-++.+++.||- +|||= .+|... -.+..|+ +|-. .++||+++|++|+|+++=+-+ +
T Consensus 446 sq~ev~~va~~~re~gIPlDvi~lD--------~~y~~~~~~~dFtwD~~rFPd---p~~mv~~Lh~~G~k~vl~V~P-~ 513 (1020)
T 2xvl_A 446 SSDEIIQNLKEYRDRKIPIDNIVLD--------WSYWPEDAWGSHDFDKQFFPD---PKALVDKVHAMNAQIMISVWP-K 513 (1020)
T ss_dssp SHHHHHHHHHHHHHTTCCCCEEEEC--------SCCSCTTCTTSCCCCTTTCSC---HHHHHHHHHHTTCEEEEEECS-E
T ss_pred CHHHHHHHHHHHHHcCCCcceEEEe--------ccccccCcccceEEChhhCCC---HHHHHHHHHHCCCEEEEEECC-c
Confidence 667777778888887765 77762 222211 1245553 5654 789999999999999885544 3
Q ss_pred CcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCC--CcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEe
Q 014892 118 RVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGV--PNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRF 195 (416)
Q Consensus 118 ~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRl 195 (416)
++.+++ .|..... ..| ......+.. .....+++. .-+|+.||++++...+.+..-+.+.|||||=+
T Consensus 514 I~~~s~----~Y~e~~~--~G~----~v~~~~~~~--~~~w~wpG~~~~v~DftNPear~~ww~~l~~~l~~~GiDg~W~ 581 (1020)
T 2xvl_A 514 FYPTTD----NYKELNA--KGF----MFNRNLDEK--NLDWIGKGYLNAFYDPFSPEATAIFWKQIRDKINVHGFDAWWL 581 (1020)
T ss_dssp ECTTSH----HHHHHHH--TTC----EETHHHHTT--CCCSSTTCCCCEEECTTSHHHHHHHHHHHHHHTGGGTCCEEEE
T ss_pred cCCCch----hHHHHHh--CCC----EEEcCCCCc--cccccCCCCCceeeCCCChHHHHHHHHHHHHHhhhcCCcEEEe
Confidence 443322 1111100 000 000000000 000001222 34699999999987777755444899999999
Q ss_pred cccC
Q 014892 196 DFAR 199 (416)
Q Consensus 196 D~a~ 199 (416)
|+..
T Consensus 582 DmnE 585 (1020)
T 2xvl_A 582 DAVE 585 (1020)
T ss_dssp CCTT
T ss_pred cCCC
Confidence 9863
|
| >1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A* | Back alignment and structure |
|---|
Probab=94.06 E-value=0.12 Score=51.09 Aligned_cols=87 Identities=13% Similarity=0.216 Sum_probs=56.8
Q ss_pred cCceeEEEeee-cCC---CCC---CcHHHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCC-----HH
Q 014892 26 NGREILFQGFN-WES---CKH---DWWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGS-----EH 93 (416)
Q Consensus 26 ~~~~~~~q~f~-~~~---~~~---G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt-----~~ 93 (416)
+|..+.+.++. |.. ... ++-..+.+.|+.+|++|+|+|=+. .+.. .. ++...-+..+.+.-|. .+
T Consensus 35 nG~p~~~~G~N~~~~~~~~~~~~~~~~~~~~~dl~~~k~~G~N~vR~~-~~d~-~~-~~~~~~~~~~~~~~g~~~e~~~~ 111 (440)
T 1uuq_A 35 QGKPYVITGVNMWYAAYLGAPNEVGDRDRLAKELDNLKAIGVNNLRVL-AVSE-KS-EINSAVKPAVTNGFGNYDETLLQ 111 (440)
T ss_dssp TTEEECEEEEECTTHHHHTCSSTTCCHHHHHHHHHHHHHTTCCEEEEE-CCCB-CC-CSTTSCSSCSBSSTTCBCHHHHH
T ss_pred CCeEEEEEeEccCchhhhccCcccCCHHHHHHHHHHHHHcCCCEEEEC-cccC-CC-CCcccccccccCCCCccCHHHHH
Confidence 78888888887 221 112 367788899999999999999887 2211 00 1110001122222232 45
Q ss_pred HHHHHHHHHHHCCCEEEEEEcc
Q 014892 94 LLKALLHKMKQHKVRAMADIVI 115 (416)
Q Consensus 94 d~~~Lv~~aH~~Gi~VilD~V~ 115 (416)
.|..+++.|.++||+||+|+.-
T Consensus 112 ~lD~~l~~a~~~Gi~vil~l~~ 133 (440)
T 1uuq_A 112 GLDYLLVELAKRDMTVVLYFNN 133 (440)
T ss_dssp HHHHHHHHHHHTTCEEEEECCB
T ss_pred HHHHHHHHHHHCCCEEEEEccc
Confidence 6779999999999999999863
|
| >1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A* | Back alignment and structure |
|---|
Probab=94.02 E-value=0.15 Score=53.05 Aligned_cols=122 Identities=10% Similarity=0.041 Sum_probs=71.2
Q ss_pred HHHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCC--CHHHHHHHHHHHHHCCCEEEEEEccccCcCCC
Q 014892 45 WRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYG--SEHLLKALLHKMKQHKVRAMADIVINHRVGTT 122 (416)
Q Consensus 45 ~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~G--t~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~ 122 (416)
-.-..+.++.+|++|+|+|-+. ++. |. .+.|.=| ..+.+.++++.||++||+||+++- |.+...
T Consensus 13 ~~~~~~dl~~mk~~G~N~vR~~-if~----W~-------~~eP~~g~~d~~~ld~~ld~a~~~Gi~vil~~~--~~~~P~ 78 (645)
T 1kwg_A 13 KERWKEDARRMREAGLSHVRIG-EFA----WA-------LLEPEPGRLEWGWLDEAIATLAAEGLKVVLGTP--TATPPK 78 (645)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEC-TTC----HH-------HHCSBTTBCCCHHHHHHHHHHHTTTCEEEEECS--TTSCCH
T ss_pred HHHHHHHHHHHHHcCCCEEEEe-eec----hh-------hcCCCCCccChHHHHHHHHHHHHCCCEEEEeCC--CCCCCh
Confidence 5667888999999999999984 211 00 0111101 135789999999999999999862 222110
Q ss_pred CCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhc----CCCeEEecc
Q 014892 123 QGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTV----GFQDFRFDF 197 (416)
Q Consensus 123 ~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~----gvDGfRlD~ 197 (416)
| .....++|... ..+|.. ..+..-...++.+|..++++.+.++..++.+ .|.|+-++.
T Consensus 79 -W-------l~~~~P~~~~~----~~~G~~-----~~~g~r~~~~~~~p~~~~~~~~~~~~l~~ry~~~p~V~~w~i~N 140 (645)
T 1kwg_A 79 -W-------LVDRYPEILPV----DREGRR-----RRFGGRRHYCFSSPVYREEARRIVTLLAERYGGLEAVAGFQTDN 140 (645)
T ss_dssp -H-------HHHHCGGGSCB----CTTSCB-----CCSSSSCCCCTTCHHHHHHHHHHHHHHHHHHTTCTTEEEEECSS
T ss_pred -h-------HhhcCCceeee----CCCCcC-----cccCccccCCCCCHHHHHHHHHHHHHHHHHhCCCCcEEEEEecC
Confidence 1 00000111110 001110 0111123355778999999999988888777 577887775
|
| >3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A* | Back alignment and structure |
|---|
Probab=93.89 E-value=0.066 Score=53.29 Aligned_cols=84 Identities=27% Similarity=0.466 Sum_probs=54.4
Q ss_pred ceeEEEeeecCCC------CCC-cHHHHHhhhhhHHHcCCCEEEeCCCC-CCCCCCCccc--ccCCCCCCCC---CCHHH
Q 014892 28 REILFQGFNWESC------KHD-WWRNLERKVPDISKSGFTSVWLPPAT-HSFAPEGYLP--QNLYSLNSSY---GSEHL 94 (416)
Q Consensus 28 ~~~~~q~f~~~~~------~~G-~~~gi~~~LdyLk~LGv~~I~L~Pi~-~~~~~~GY~~--~d~~~id~~~---Gt~~d 94 (416)
..+.+.+..|--. .+| +-+.+.+.++.||++|+|+|=|+ +. +.-...+ .+ .+ +.++|.+ ...+.
T Consensus 59 ~~v~l~GVN~~G~e~~~~~~~Gl~~~~~~~~i~~ik~~G~N~VRip-i~~~~l~~~~-~p~~~~-~~~np~~~~~~~l~~ 135 (458)
T 3qho_A 59 TPIHLFGVNWFGFETPNHVVHGLWKRNWEDMLLQIKSLGFNAIRLP-FCTESVKPGT-QPIGID-YSKNPDLRGLDSLQI 135 (458)
T ss_dssp EECCCEEEECCCTTSTTCSCTTTTTSCHHHHHHHHHHTTCCEEEEE-EETGGGSTTC-CCCCCC-TTTCGGGTTCCHHHH
T ss_pred ceEEEEEEecCcccccccccCCCCCCCHHHHHHHHHHcCCCEEEEe-eeHHHhCCCC-Cccccc-cccCccccchHHHHH
Confidence 5678888887211 123 22335678889999999999884 22 1100000 01 11 4455544 24789
Q ss_pred HHHHHHHHHHCCCEEEEEEc
Q 014892 95 LKALLHKMKQHKVRAMADIV 114 (416)
Q Consensus 95 ~~~Lv~~aH~~Gi~VilD~V 114 (416)
++++|+.|+++||+||+|+-
T Consensus 136 ld~vV~~a~~~Gi~VIldlH 155 (458)
T 3qho_A 136 MEKIIKKAGDLGIFVLLDYH 155 (458)
T ss_dssp HHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHCCCEEEEecc
Confidence 99999999999999999994
|
| >3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A* | Back alignment and structure |
|---|
Probab=93.77 E-value=0.056 Score=50.91 Aligned_cols=58 Identities=14% Similarity=0.202 Sum_probs=40.7
Q ss_pred HhhhhhHHHcCCCEEEeCCCCCCCCCCCcc-cccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Q 014892 49 ERKVPDISKSGFTSVWLPPATHSFAPEGYL-PQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADI 113 (416)
Q Consensus 49 ~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~-~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~ 113 (416)
.+-++.||++|+|+|=|+ |. ..... ..+-+.+++. ..+.++++|+.|+++||+||+|+
T Consensus 44 ~~d~~~l~~~G~n~vRi~-i~----w~~~~~~~~~~~~~~~--~~~~~d~~v~~a~~~Gi~vildl 102 (320)
T 3nco_A 44 DEYFKIIKERGFDSVRIP-IR----WSAHISEKYPYEIDKF--FLDRVKHVVDVALKNDLVVIINC 102 (320)
T ss_dssp HHHHHHHHHHTCCEEEEC-CC----GGGSBCSSTTCCBCHH--HHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHCCCCEEEEe-ee----hHHhcCCCCCCccCHH--HHHHHHHHHHHHHHCCCEEEEEc
Confidence 577899999999999984 32 11111 1112333332 26789999999999999999997
|
| >3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A | Back alignment and structure |
|---|
Probab=93.73 E-value=0.085 Score=51.48 Aligned_cols=57 Identities=19% Similarity=0.296 Sum_probs=39.6
Q ss_pred HhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCCCCC-CCHHHHHHHHHHHHHCCCEEEEEE
Q 014892 49 ERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSY-GSEHLLKALLHKMKQHKVRAMADI 113 (416)
Q Consensus 49 ~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~-Gt~~d~~~Lv~~aH~~Gi~VilD~ 113 (416)
.+-++.||++|+|+|=|+=-+.. +.+. .-+|.. |..+-|+++|+.|+++||+||||+
T Consensus 76 e~D~~~ik~~G~N~VRipi~~~~-----~~~~---~~~py~~~~~~~ld~vV~~a~~~Gl~VILDl 133 (399)
T 3n9k_A 76 EQDFKQISNLGLNFVRIPIGYWA-----FQLL---DNDPYVQGQVQYLEKALGWARKNNIRVWIDL 133 (399)
T ss_dssp HHHHHHHHHTTCCEEEEEEEGGG-----TCCC---TTCCCCCCHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEEcccHHH-----ccCC---CCCccchhHHHHHHHHHHHHHHCCCEEEEEe
Confidence 35688999999999987321111 1110 001111 468899999999999999999998
|
| >3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A* | Back alignment and structure |
|---|
Probab=93.65 E-value=0.038 Score=53.65 Aligned_cols=69 Identities=10% Similarity=0.053 Sum_probs=45.1
Q ss_pred cHHHHHhhhhhHHHcCCCEEEeCCCCCC------------CCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
Q 014892 44 WWRNLERKVPDISKSGFTSVWLPPATHS------------FAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMA 111 (416)
Q Consensus 44 ~~~gi~~~LdyLk~LGv~~I~L~Pi~~~------------~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~Vil 111 (416)
+-+-+.+.|+.+|++|+|+|=+.-+... +...-|+.-.. ++..--..+.|.++|+.|+++||+|||
T Consensus 41 ~~~~i~~~l~~~a~~G~N~VRv~~f~d~~~~~~~~~~~lqp~~G~yd~~~~--~~~~~~~~~~LD~~i~~A~k~GI~viL 118 (383)
T 3pzg_A 41 SNRMIDSVLESARDMGIKVLRIWGFLDGESYCRDKNTYMHPEPGVFGVPEG--ISNAQNGFERLDYTIAKAKELGIKLII 118 (383)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEECCCBSHHHHHHHTEESBSBTTBCSSCTT--CSSCEEHHHHHHHHHHHHHHHTCEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccccccccccccccccccCCCccccccc--ccchHHHHHHHHHHHHHHHHCCCEEEE
Confidence 4566788899999999999977432211 01112221111 111111278899999999999999999
Q ss_pred EEc
Q 014892 112 DIV 114 (416)
Q Consensus 112 D~V 114 (416)
|+.
T Consensus 119 ~l~ 121 (383)
T 3pzg_A 119 VLV 121 (383)
T ss_dssp ECC
T ss_pred Ecc
Confidence 985
|
| >3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A* | Back alignment and structure |
|---|
Probab=93.53 E-value=0.41 Score=49.97 Aligned_cols=119 Identities=9% Similarity=-0.030 Sum_probs=69.9
Q ss_pred HHHHHhhhhhHHHcCCCEEEeCCC-----CCCCCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccccCc
Q 014892 45 WRNLERKVPDISKSGFTSVWLPPA-----THSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRV 119 (416)
Q Consensus 45 ~~gi~~~LdyLk~LGv~~I~L~Pi-----~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~ 119 (416)
-.-..+.|..+|++|+|+|-+..+ .+.+ ..| | .+.+.++|+.||++||+||+.... .+
T Consensus 22 ~~~~~~Dl~~mk~~G~n~vr~~if~W~~~eP~~--g~~---~----------f~~ld~~i~~~~~~Gi~vil~~~~--~~ 84 (675)
T 3tty_A 22 KATMEEDMRMFNLAGIDVATVNVFSWAKIQRDE--VSY---D----------FTWLDDIIERLTKENIYLCLATST--GA 84 (675)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECSSCHHHHBSSS--SCB---C----------CHHHHHHHHHHHHTTCEEEEECCT--TS
T ss_pred HHHHHHHHHHHHHcCCCEEEEeeechhhhCCcC--Ccc---C----------HHHHHHHHHHHHHCCCEEEEeCCC--CC
Confidence 666888899999999999998542 1221 112 1 268999999999999999997532 11
Q ss_pred CCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCC----CeEEe
Q 014892 120 GTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGF----QDFRF 195 (416)
Q Consensus 120 ~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gv----DGfRl 195 (416)
.| . |.....+.|-. ...+|.. ..+..-...++.+|..++++.+.++..++.|+- -++-+
T Consensus 85 --~P----~--Wl~~~~Pe~l~----~d~~G~~-----~~~g~r~~~~~~~p~~~~~~~~~~~~l~~ry~~~p~Vi~w~v 147 (675)
T 3tty_A 85 --HP----A--WMAKKYPDVLR----VDYEGRK-----RKFGGRHNSCPNSPTYRKYAKILAGKLAERYKDHPQIVMWHV 147 (675)
T ss_dssp --CC----H--HHHHHCGGGBC----BCTTSCB-----CCSCSSSCBCTTCHHHHHHHHHHHHHHHHHTTTCTTEEEEEC
T ss_pred --CC----h--hhhhcCCceee----ecCCCcC-----cccCCccCCCCCCHHHHHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 11 0 00000001100 0001110 001122335678899999999998888876653 45555
Q ss_pred cc
Q 014892 196 DF 197 (416)
Q Consensus 196 D~ 197 (416)
+.
T Consensus 148 ~N 149 (675)
T 3tty_A 148 SN 149 (675)
T ss_dssp SS
T ss_pred cc
Confidence 53
|
| >1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=93.30 E-value=0.071 Score=50.65 Aligned_cols=59 Identities=8% Similarity=0.083 Sum_probs=40.9
Q ss_pred HHhhhhhHHHcCCCEEEeCCCCCCCCCCCcccc-cCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Q 014892 48 LERKVPDISKSGFTSVWLPPATHSFAPEGYLPQ-NLYSLNSSYGSEHLLKALLHKMKQHKVRAMADI 113 (416)
Q Consensus 48 i~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~-d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~ 113 (416)
..+-++.||++|+|+|=|+--+.. +.+. +.+.+++ +..+.++++|+.|.++||+||+|+
T Consensus 38 ~~~d~~~i~~~G~n~vRi~i~~~~-----~~~~~~p~~~~~--~~~~~ld~~v~~a~~~Gi~vildl 97 (341)
T 1vjz_A 38 KEEDFLWMAQWDFNFVRIPMCHLL-----WSDRGNPFIIRE--DFFEKIDRVIFWGEKYGIHICISL 97 (341)
T ss_dssp CHHHHHHHHHTTCCEEEEEEEGGG-----TSCSSCTTCCCG--GGHHHHHHHHHHHHHHTCEEEEEE
T ss_pred CHHHHHHHHHcCCCEEEeeCCHHH-----hcCCCCCCcCCH--HHHHHHHHHHHHHHHcCCEEEEEe
Confidence 456688999999999987432111 1110 1122222 357889999999999999999998
|
| >1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=93.18 E-value=0.059 Score=52.17 Aligned_cols=59 Identities=14% Similarity=0.282 Sum_probs=40.3
Q ss_pred HHhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Q 014892 48 LERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADI 113 (416)
Q Consensus 48 i~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~ 113 (416)
..+.++.||++|+|+|=|+--+.. +.+..-+.+++. ..+.++++|+.|.++||+||+|+
T Consensus 63 ~~~di~~i~~~G~n~vRipv~w~~-----~~~~~~~~~~~~--~l~~l~~~v~~a~~~Gi~vild~ 121 (380)
T 1edg_A 63 TKQMIDAIKQKGFNTVRIPVSWHP-----HVSGSDYKISDV--WMNRVQEVVNYCIDNKMYVILNT 121 (380)
T ss_dssp CHHHHHHHHHHTCCEEEECCCCGG-----GEETTTTEECHH--HHHHHHHHHHHHHTTTCEEEEEC
T ss_pred cHHHHHHHHHcCCCEEEecccHHh-----hcCCCCCcCCHH--HHHHHHHHHHHHHHCCCEEEEeC
Confidence 356688899999999998532211 111101223321 25789999999999999999996
|
| >1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12 | Back alignment and structure |
|---|
Probab=93.04 E-value=0.062 Score=51.75 Aligned_cols=59 Identities=12% Similarity=0.166 Sum_probs=40.8
Q ss_pred CcHHHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCCC-CCCCHHHHHHHHHHHHHCCCEEEEEEccc
Q 014892 43 DWWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNS-SYGSEHLLKALLHKMKQHKVRAMADIVIN 116 (416)
Q Consensus 43 G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~-~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~N 116 (416)
.+.+...+-|+-.+++|++.|+.+=. .++. .=-..+.|++|++.||+.||+||+|+-+.
T Consensus 38 ~~~~~~~~Yi~~a~~~Gf~~IFTSL~---------------~~e~~~~~~~~~~~~l~~~a~~~g~~vi~DVsp~ 97 (385)
T 1x7f_A 38 STKEKDMAYISAAARHGFSRIFTCLL---------------SVNRPKEEIVAEFKEIINHAKDNNMEVILDVAPA 97 (385)
T ss_dssp SCHHHHHHHHHHHHTTTEEEEEEEEC---------------CC--------HHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCHHHHHHHHHHHHHCCCCEEEccCC---------------ccCCChHHHHHHHHHHHHHHHHCCCEEEEECCHH
Confidence 45666666677777889999976432 1111 01135789999999999999999999664
|
| >2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A* | Back alignment and structure |
|---|
Probab=92.68 E-value=0.055 Score=54.21 Aligned_cols=81 Identities=16% Similarity=0.153 Sum_probs=50.1
Q ss_pred cCceeEEEeeecCCC----CCCcHHHHHhhh-hhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCHHHHHHHHH
Q 014892 26 NGREILFQGFNWESC----KHDWWRNLERKV-PDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLH 100 (416)
Q Consensus 26 ~~~~~~~q~f~~~~~----~~G~~~gi~~~L-dyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~ 100 (416)
.|+.++++++.+.-. ..|.-.-..+.+ +.||++|+|+|=|.-.+.. ..+.. -.++ ....+.++++|+
T Consensus 41 ~G~~~~l~GvN~~~~~~~~~~g~~~~~~~di~~~l~~~G~N~VRl~v~w~~-----~~p~~-g~~~--~~~l~~l~~~v~ 112 (481)
T 2osx_A 41 DGRSLILRGFNTASSAKSAPDGMPQFTEADLAREYADMGTNFVRFLISWRS-----VEPAP-GVYD--QQYLDRVEDRVG 112 (481)
T ss_dssp TCCEECCEEEEECGGGGTCTTSCCSCCHHHHHHHHHHHCCCEEEEEECHHH-----HCSBT-TBCC--HHHHHHHHHHHH
T ss_pred CCCEEEeeeEecCCCCCCCCCCCccccHHHHHHHHHHCCCCEEEEeCcHHH-----cCCCC-CCcC--HHHHHHHHHHHH
Confidence 566777777765321 123223345677 8999999999987421110 00000 0011 123577888999
Q ss_pred HHHHCCCEEEEEEc
Q 014892 101 KMKQHKVRAMADIV 114 (416)
Q Consensus 101 ~aH~~Gi~VilD~V 114 (416)
.|+++||+||||+-
T Consensus 113 ~a~~~Gi~vildlH 126 (481)
T 2osx_A 113 WYAERGYKVMLDMH 126 (481)
T ss_dssp HHHHTTCEEEEEEC
T ss_pred HHHHCCCEEEEEcc
Confidence 99999999999974
|
| >3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A | Back alignment and structure |
|---|
Probab=92.63 E-value=0.17 Score=47.93 Aligned_cols=77 Identities=16% Similarity=0.188 Sum_probs=49.2
Q ss_pred ccCceeEEEeeecCCC-CCCcHHHHHhhhhhH-HHcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCHHHHHHHHHHH
Q 014892 25 RNGREILFQGFNWESC-KHDWWRNLERKVPDI-SKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKM 102 (416)
Q Consensus 25 ~~~~~~~~q~f~~~~~-~~G~~~gi~~~LdyL-k~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~a 102 (416)
.+|..+.+++..+--. ..|.+- -.+.++.| |++|+|+|=+ |++.. ..|| .++|. ..+.++++|+.|
T Consensus 47 ~nG~~v~l~Gvn~h~~~~~~~~~-~~~~~~~l~~~~G~N~VRi-~~~~~--~~~~------~~~~~--~~~~ld~~v~~a 114 (327)
T 3pzt_A 47 RDGKAVQLKGISSHGLQWYGEYV-NKDSLKWLRDDWGITVFRA-AMYTA--DGGY------IDNPS--VKNKVKEAVEAA 114 (327)
T ss_dssp TTSCBCCCEEEEESCHHHHGGGC-SHHHHHHHHHHTCCSEEEE-EEESS--TTST------TTCGG--GHHHHHHHHHHH
T ss_pred CCCCEEEEEEEcCCchhhcCCCC-CHHHHHHHHHhcCCCEEEE-EeEEC--CCCc------ccCHH--HHHHHHHHHHHH
Confidence 3677777777752200 001110 02346678 6899999988 55432 1232 23443 388999999999
Q ss_pred HHCCCEEEEEE
Q 014892 103 KQHKVRAMADI 113 (416)
Q Consensus 103 H~~Gi~VilD~ 113 (416)
.++||+||+|+
T Consensus 115 ~~~Gi~VilD~ 125 (327)
T 3pzt_A 115 KELGIYVIIDW 125 (327)
T ss_dssp HHHTCEEEEEE
T ss_pred HHCCCEEEEEe
Confidence 99999999997
|
| >1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A | Back alignment and structure |
|---|
Probab=92.56 E-value=0.16 Score=48.17 Aligned_cols=60 Identities=18% Similarity=0.273 Sum_probs=39.9
Q ss_pred HhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEc
Q 014892 49 ERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIV 114 (416)
Q Consensus 49 ~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V 114 (416)
.+.++.||++|+|+|=|+--+..-.... .-..+++ +..+.++++|+.|+++||+||+|+-
T Consensus 31 ~~d~~~i~~~G~n~vRi~i~~~~~~~~~----~~g~~~~--~~~~~l~~~v~~a~~~Gi~vildlh 90 (343)
T 1ceo_A 31 EKDIETIAEAGFDHVRLPFDYPIIESDD----NVGEYKE--DGLSYIDRCLEWCKKYNLGLVLDMH 90 (343)
T ss_dssp HHHHHHHHHHTCCEEEEEEEGGGTBCSS----STTCBCH--HHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHcCCCEEEecCCHHHhcccc----CCCcccH--HHHHHHHHHHHHHHHCCCEEEEEec
Confidence 5678899999999998853221100000 0011111 2467899999999999999999973
|
| >3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina} | Back alignment and structure |
|---|
Probab=92.52 E-value=0.054 Score=51.73 Aligned_cols=61 Identities=16% Similarity=0.127 Sum_probs=41.6
Q ss_pred HHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCccc-ccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Q 014892 46 RNLERKVPDISKSGFTSVWLPPATHSFAPEGYLP-QNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADI 113 (416)
Q Consensus 46 ~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~-~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~ 113 (416)
++..+.++.||++|+|+|=| ||.-. ...+ ..-..+++. ..+-++++|+.|.++||+||+|+
T Consensus 43 ~~t~~m~~~i~~~G~N~vRi-pi~w~----~~~~~~~~g~~~~~--~l~~ld~vV~~a~~~Gi~vIlDl 104 (340)
T 3qr3_A 43 DGIGQMQHFVNEDGMTIFRL-PVGWQ----YLVNNNLGGNLDST--SISKYDQLVQGCLSLGAYCIVDI 104 (340)
T ss_dssp CHHHHHHHHHHHHCCCEEEE-EECHH----HHTTTCTTCCCCHH--HHHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccHHHHHHHHHHCCCCEEEE-EeeHH----HhCCCCCCCccCHH--HHHHHHHHHHHHHHCCCEEEEEe
Confidence 45667778899999999988 33210 0011 001123332 27889999999999999999998
|
| >1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A* | Back alignment and structure |
|---|
Probab=92.37 E-value=0.11 Score=48.06 Aligned_cols=81 Identities=14% Similarity=0.134 Sum_probs=50.5
Q ss_pred cCceeEEEeeecCCCCCC--cHHH-HHhhhhhHH-HcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCHHHHHHHHHH
Q 014892 26 NGREILFQGFNWESCKHD--WWRN-LERKVPDIS-KSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHK 101 (416)
Q Consensus 26 ~~~~~~~q~f~~~~~~~G--~~~g-i~~~LdyLk-~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~ 101 (416)
+|..+.++++.+--...| .-+- ..+.++.|| ++|+|+|=| |+...+...||. ..+|. +..+.++++|+.
T Consensus 15 nG~~v~l~Gvn~~~~~~~~~~~~~~~~~di~~~~~~~G~N~vRi-~~~~~~~~~~~~-----~~~p~-~~~~~ld~~v~~ 87 (293)
T 1tvn_A 15 GGENTSFAGPSLFWSNTGWGAEKFYTAETVAKAKTEFNATLIRA-AIGHGTSTGGSL-----NFDWE-GNMSRLDTVVNA 87 (293)
T ss_dssp TTEECCCEEEEECCCCTTSSCGGGCSHHHHHHHHHHHCCSEEEE-EEECCTTSTTST-----TTCHH-HHHHHHHHHHHH
T ss_pred CCCEEEEEeeeecccccccCCCCCCCHHHHHHHHHhcCCCEEEE-eccccCCCCCcc-----ccChH-HHHHHHHHHHHH
Confidence 677888888865311111 1111 246678899 599999987 332211112332 11221 235778999999
Q ss_pred HHHCCCEEEEEE
Q 014892 102 MKQHKVRAMADI 113 (416)
Q Consensus 102 aH~~Gi~VilD~ 113 (416)
|.++||+||+|+
T Consensus 88 a~~~Gi~vild~ 99 (293)
T 1tvn_A 88 AIAEDMYVIIDF 99 (293)
T ss_dssp HHHTTCEEEEEE
T ss_pred HHHCCCEEEEEc
Confidence 999999999997
|
| >2ki0_A DS119; beta-alpha-beta, de novo protein; NMR {Synthetic} | Back alignment and structure |
|---|
Probab=92.33 E-value=0.069 Score=30.84 Aligned_cols=21 Identities=29% Similarity=0.426 Sum_probs=19.7
Q ss_pred CCHHHHHHHHHHHHHCCCEEE
Q 014892 90 GSEHLLKALLHKMKQHKVRAM 110 (416)
Q Consensus 90 Gt~~d~~~Lv~~aH~~Gi~Vi 110 (416)
|++|++|.|-++|++..|+|-
T Consensus 12 gtpeelkklkeeakkanirvt 32 (36)
T 2ki0_A 12 GTPEELKKLKEEAKKANIRVT 32 (36)
T ss_dssp CCHHHHHHHHHHHHHHCCCCC
T ss_pred CCHHHHHHHHHHHHhccEEEE
Confidence 899999999999999999974
|
| >3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A* | Back alignment and structure |
|---|
Probab=92.12 E-value=0.13 Score=49.00 Aligned_cols=58 Identities=10% Similarity=0.240 Sum_probs=40.4
Q ss_pred HhhhhhHHHcCCCEEEeCCCCCCCCCCCcccc-cCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Q 014892 49 ERKVPDISKSGFTSVWLPPATHSFAPEGYLPQ-NLYSLNSSYGSEHLLKALLHKMKQHKVRAMADI 113 (416)
Q Consensus 49 ~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~-d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~ 113 (416)
.+.++.||++|+|+|=|+=-+.. +.+. .-+.+++ +..+.++++|+.|.++||+||+|+
T Consensus 45 ~~di~~i~~~G~n~vRipi~w~~-----~~~~~~~~~~~~--~~l~~l~~~v~~a~~~Gi~vildl 103 (345)
T 3ndz_A 45 HAMINKIKEAGFNTLRLPVTWDG-----HMGAAPEYTIDQ--TWMKRVEEIANYAFDNDMYVIINL 103 (345)
T ss_dssp HHHHHHHHHHTCCEEEECCCCTT-----SBCCTTTCCBCH--HHHHHHHHHHHHHHTTTCEEEECC
T ss_pred HHHHHHHHHCCCCEEEEeeehHH-----hCCCCCCCccCH--HHHHHHHHHHHHHHHCCCEEEEec
Confidence 56788999999999988432221 1110 0123333 136889999999999999999996
|
| >1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=92.01 E-value=0.19 Score=48.17 Aligned_cols=86 Identities=14% Similarity=0.065 Sum_probs=52.9
Q ss_pred cCceeEEEeeec--CCC---CCCcHHHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCHHHHHHHHH
Q 014892 26 NGREILFQGFNW--ESC---KHDWWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLH 100 (416)
Q Consensus 26 ~~~~~~~q~f~~--~~~---~~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~ 100 (416)
+|..+.+.++.. ... ...+-..+.+.|+.+|++|+|+|=+ +++.......+.+.. ...++ ...+.|.++|+
T Consensus 17 nG~p~~~~G~n~~~~~~~~~~~~~~~~~~~dl~~~k~~G~N~vR~-~~~~~~~w~~~~~~~-g~~~~--~~~~~ld~~i~ 92 (373)
T 1rh9_A 17 NGKSLYINGFNAYWLMYIAYDPSTRIKVTNTFQQASKYKMNVART-WAFSHGGSRPLQSAP-GVYNE--QMFQGLDFVIS 92 (373)
T ss_dssp TTEEECEEEEECTTHHHHHHSTTTTHHHHHHHHHHHHTTCCEEEE-ESSCSSSSSCSEEET-TEECH--HHHHHHHHHHH
T ss_pred CCEEEEEEEEccccccccccCCccHHHHHHHHHHHHHCCCCEEEE-CeecCCCCccccCCC-CccCH--HHHHHHHHHHH
Confidence 777888888862 100 0013456788899999999999987 322211111111110 00010 12567889999
Q ss_pred HHHHCCCEEEEEEcc
Q 014892 101 KMKQHKVRAMADIVI 115 (416)
Q Consensus 101 ~aH~~Gi~VilD~V~ 115 (416)
.|+++||+||+|+.-
T Consensus 93 ~a~~~Gi~vil~l~~ 107 (373)
T 1rh9_A 93 EAKKYGIHLIMSLVN 107 (373)
T ss_dssp HHHHTTCEEEEECCB
T ss_pred HHHHCCCEEEEEecc
Confidence 999999999999753
|
| >3ebv_A Chinitase A; chitinase A, CHIA, glycosidase, structural genomics, unknown function, hydrolase, PSI-2, protein structure initiative; 1.50A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=91.97 E-value=0.88 Score=42.46 Aligned_cols=81 Identities=11% Similarity=0.160 Sum_probs=58.2
Q ss_pred CHHHHHHHHHHHHHCCCEEEEEEccccCcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCC
Q 014892 91 SEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQ 170 (416)
Q Consensus 91 t~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~ 170 (416)
+.++|++.|++||++|+||+|=+ +. |.. .....+
T Consensus 60 ~~~~~~~~i~~~~~~g~kvllsi-----GG------------------~~~-----------------------s~~~~~ 93 (302)
T 3ebv_A 60 TVDQFKADVRAKQAAGKKVIISV-----GG------------------EKG-----------------------TVSVNS 93 (302)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEE-----EE------------------TTC-----------------------CCCCCS
T ss_pred CHHHHHHHHHHHHcCCCEEEEEE-----EC------------------CCC-----------------------CcccCC
Confidence 47889999999999999999965 11 100 012356
Q ss_pred HHHHHHHHHHHHHHHHhcCCCeEEecccCCCcH----HHHHHHHHhcCCce
Q 014892 171 HFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSA----KYVKEYIEGARPIF 217 (416)
Q Consensus 171 ~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~----~~~~~~~~~~~~~~ 217 (416)
++.|+.+++.+..+++++|+||+-+|-=..... .+++++.++..+.+
T Consensus 94 ~~~r~~f~~~~~~~~~~~~~DGiDiD~E~p~~~~~~~~~l~~l~~~~g~~~ 144 (302)
T 3ebv_A 94 SASATNFANSVYSVMREYGFDGVDIDLENGLNPTYMTQALRALSAKAGPDM 144 (302)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEEEECSCCCHHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHHHHHhCCCeEEEecccccCHHHHHHHHHHHHHhcCCCE
Confidence 888999999999888999999999997554433 35566666553333
|
| >3n12_A Chitinase A, chinctu2; zinc atoms, complex, hydrolase; 1.20A {Bacillus cereus} PDB: 3n11_A 3n15_A* 3n13_A* 3n17_A* 3n18_A* 3n1a_A* | Back alignment and structure |
|---|
Probab=91.88 E-value=0.68 Score=43.86 Aligned_cols=69 Identities=16% Similarity=0.287 Sum_probs=52.9
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccccCcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCC
Q 014892 84 SLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGV 163 (416)
Q Consensus 84 ~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (416)
.++|...+.+++.+.+++||++|+|||+=+ +. |...
T Consensus 50 ~~~~~~~~~~~~~~~i~~~k~~g~kvllsi-----GG------------------~~~s--------------------- 85 (333)
T 3n12_A 50 EFSPVYGTDADFKSDISYLKSKGKKVVLSI-----GG------------------QNGV--------------------- 85 (333)
T ss_dssp ECCCSSSCHHHHHHHHHHHHHTTCEEEEEE-----ES------------------TTCC---------------------
T ss_pred EecCCccchHHHHHHHHHHHhCCCeEEEEe-----cC------------------CCCc---------------------
Confidence 345656678899999999999999999855 11 1100
Q ss_pred CcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEeccc
Q 014892 164 PNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFA 198 (416)
Q Consensus 164 ~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a 198 (416)
.-..+++.|+.+++.+..+++++|+||+-+|-=
T Consensus 86 --~~~~~~~~r~~fi~si~~~~~~~gfDGiDiDwE 118 (333)
T 3n12_A 86 --VLLPDNAAKDRFINSIQSLIDKYGFDGIDIDLE 118 (333)
T ss_dssp --CCCCSHHHHHHHHHHHHHHHHHHCCSEEEEECC
T ss_pred --cccCCHHHHHHHHHHHHHHHHHcCCCeEEEecc
Confidence 123468889999999998899999999999964
|
| >4axn_A Chitinase C1; hydrolase; 1.68A {Serratia marcescens} | Back alignment and structure |
|---|
Probab=91.71 E-value=0.66 Score=43.76 Aligned_cols=66 Identities=12% Similarity=0.148 Sum_probs=46.1
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEEccccCcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCc
Q 014892 86 NSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPN 165 (416)
Q Consensus 86 d~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 165 (416)
++.-.+.++|++.|++||++|+|||+=+ +. |... ..
T Consensus 76 ~~~~~~~~~~~~~i~~~~~~g~kvllSi-----GG------------------~~~~---------------------~~ 111 (328)
T 4axn_A 76 KPYNLSDTEFRRQVGVLNSQGRAVLISL-----GG------------------ADAH---------------------IE 111 (328)
T ss_dssp CCSSSCHHHHHHHHHHHHHTTCEEEEEE-----EE------------------TTCC---------------------CC
T ss_pred ccCCCCHHHHHHHHHHHHHCCCEEEEEe-----CC------------------CCCC---------------------cc
Confidence 3444578899999999999999999854 11 1100 00
Q ss_pred CCCCCHHHHHHHHHHHHHHHHhcCCCeEEeccc
Q 014892 166 IDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFA 198 (416)
Q Consensus 166 ln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a 198 (416)
++. +-|+.+++.+..+++++|+||+=||-=
T Consensus 112 ~~~---~~r~~F~~s~~~~l~~ygfDGiDiDwE 141 (328)
T 4axn_A 112 LKT---GDEDKLKDEIIRLVEVYGFDGLDIDLE 141 (328)
T ss_dssp CCT---TCHHHHHHHHHHHHHHHCCCEEEEEEC
T ss_pred CCh---HHHHHHHHHHHHHHHHhCCCeEEEecc
Confidence 111 126677888878888999999999964
|
| >3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A* | Back alignment and structure |
|---|
Probab=91.57 E-value=0.29 Score=45.71 Aligned_cols=58 Identities=12% Similarity=0.142 Sum_probs=40.2
Q ss_pred HhhhhhHHHcCCCEEEeCCCCCCCCCCCccc-ccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Q 014892 49 ERKVPDISKSGFTSVWLPPATHSFAPEGYLP-QNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADI 113 (416)
Q Consensus 49 ~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~-~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~ 113 (416)
.+.++.||++|+|+|=|.--+.. ..+ ..-|.+++ ...+.++++|+.|.++||+||+|+
T Consensus 36 ~~d~~~l~~~G~n~vR~~i~w~~-----~~~~~~~~~~~~--~~~~~~d~~v~~a~~~Gi~vild~ 94 (317)
T 3aof_A 36 DEFFDIIKEAGFSHVRIPIRWST-----HAYAFPPYKIMD--RFFKRVDEVINGALKRGLAVVINI 94 (317)
T ss_dssp THHHHHHHHHTCSEEEECCCGGG-----GBCSSTTCCBCH--HHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHcCCCEEEEeccHHH-----hcCCCCCCcCCH--HHHHHHHHHHHHHHHCCCEEEEEe
Confidence 56788999999999998632211 110 01122332 136778999999999999999997
|
| >1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A | Back alignment and structure |
|---|
Probab=91.17 E-value=0.25 Score=46.12 Aligned_cols=58 Identities=16% Similarity=0.139 Sum_probs=38.3
Q ss_pred HhhhhhHHHcCCCEEEeCCCCCCCCCCCccc-ccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Q 014892 49 ERKVPDISKSGFTSVWLPPATHSFAPEGYLP-QNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADI 113 (416)
Q Consensus 49 ~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~-~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~ 113 (416)
.+.++.||++|+|+|=|+=-++. ..+ ..-..+++ ...+-++++|+.|.++||+||+|+
T Consensus 34 ~~di~~~~~~G~n~vRi~i~w~~-----~~~~~~~~~~~~--~~l~~~~~~v~~~~~~gi~vild~ 92 (305)
T 1h1n_A 34 PNTIDTLISKGMNIFRVPFMMER-----LVPNSMTGSPDP--NYLADLIATVNAITQKGAYAVVDP 92 (305)
T ss_dssp HHHHHHHHHTTCCEEEEEECHHH-----HSCSSTTSCCCH--HHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHCCCCEEEecccHHH-----cCCCCCCCCcCH--HHHHHHHHHHHHHHHCCCEEEEec
Confidence 56788999999999987311110 000 00011221 225679999999999999999996
|
| >3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A* | Back alignment and structure |
|---|
Probab=91.12 E-value=0.37 Score=46.42 Aligned_cols=60 Identities=10% Similarity=0.091 Sum_probs=39.6
Q ss_pred HHhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Q 014892 48 LERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADI 113 (416)
Q Consensus 48 i~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~ 113 (416)
..+-++.||++|+|+|=|+ |.-.. -+....-+.+++ ...+-++++|+.|.++||+||+|+
T Consensus 64 ~~~di~~i~~~G~N~vRip-i~w~~---~~~~~~~~~~~~--~~l~~~~~vv~~a~~~Gi~vildl 123 (376)
T 3ayr_A 64 TEDMFKVLIDNQFNVFRIP-TTWSG---HFGEAPDYKIDE--KWLKRVHEVVDYPYKNGAFVILNL 123 (376)
T ss_dssp CHHHHHHHHHTTCCEEEEC-CCCTT---SBCCTTTCCBCH--HHHHHHHHHHHHHHTTTCEEEEEC
T ss_pred cHHHHHHHHHcCCCEEEEe-eEChh---hcCCCCCCccCH--HHHHHHHHHHHHHHHCCCEEEEEC
Confidence 3566888999999999984 32110 000000112222 126779999999999999999996
|
| >3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=91.12 E-value=0.72 Score=47.42 Aligned_cols=59 Identities=17% Similarity=0.083 Sum_probs=46.9
Q ss_pred cHHHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
Q 014892 44 WWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMA 111 (416)
Q Consensus 44 ~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~Vil 111 (416)
+.+....-+|.-+++|+..|.+---+.. -.-.|+..++|.+ ++++||+-||++|++|||
T Consensus 307 n~~~~k~yIDfAa~~G~~yvlvD~gW~~-----~~~~d~~~~~p~~----di~~l~~Ya~~kgV~i~l 365 (641)
T 3a24_A 307 NNPTYKAYIDFASANGIEYVILDEGWAV-----NLQADLMQVVKEI----DLKELVDYAASKNVGIIL 365 (641)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEECTTSBC-----TTSCCTTCBCTTC----CHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccccc-----CCCCCccccCCcC----CHHHHHHHHHhcCCEEEE
Confidence 8999999999999999999999332221 1112666777764 699999999999999999
|
| >1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A* | Back alignment and structure |
|---|
Probab=91.11 E-value=0.27 Score=47.19 Aligned_cols=77 Identities=16% Similarity=0.192 Sum_probs=49.0
Q ss_pred cCceeEEEeeecCCCC-CCcHHHHHhhhhhHH-HcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCHHHHHHHHHHHH
Q 014892 26 NGREILFQGFNWESCK-HDWWRNLERKVPDIS-KSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMK 103 (416)
Q Consensus 26 ~~~~~~~q~f~~~~~~-~G~~~gi~~~LdyLk-~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH 103 (416)
+|..+.++++.+--.. .+.+- -.+.++.|+ ++|+|+|=|+ +.-. ..| |.++|.+ .+.++++|+.|.
T Consensus 33 ~G~~~~lrGvn~~~~~~~~~~~-~~~d~~~l~~~~G~N~VRip-~~~~--~~~------~~~~~~~--l~~ld~~v~~a~ 100 (364)
T 1g01_A 33 DGTPVQLRGMSTHGLQWFGEIV-NENAFVALSNDWGSNMIRLA-MYIG--ENG------YATNPEV--KDLVYEGIELAF 100 (364)
T ss_dssp TSCBCCCEEEEESCHHHHGGGC-SHHHHHHHHTTSCCSEEEEE-EESS--SSS------TTTCTTH--HHHHHHHHHHHH
T ss_pred CCCEEEEEEEecCcccccCCcc-CHHHHHHHHHHCCCCEEEEE-eeeC--CCC------CccCHHH--HHHHHHHHHHHH
Confidence 5777777777642000 00000 124577786 9999999873 3211 112 3455543 688999999999
Q ss_pred HCCCEEEEEEc
Q 014892 104 QHKVRAMADIV 114 (416)
Q Consensus 104 ~~Gi~VilD~V 114 (416)
++||+||+|+-
T Consensus 101 ~~Gi~VIld~H 111 (364)
T 1g01_A 101 EHDMYVIVDWH 111 (364)
T ss_dssp HTTCEEEEEEE
T ss_pred HCCCEEEEEec
Confidence 99999999985
|
| >2y8k_A Arabinoxylanase, carbohydrate binding family 6; hydrolase; 1.47A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=91.06 E-value=0.25 Score=49.58 Aligned_cols=58 Identities=16% Similarity=0.232 Sum_probs=40.5
Q ss_pred hhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Q 014892 50 RKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADI 113 (416)
Q Consensus 50 ~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~ 113 (416)
+.++.||++|+|+|=| |+.-.. .+|... -..+|.+ ..+.++++|+.|.++||+||||+
T Consensus 43 ~d~~~i~~~G~N~VRi-pv~~~~--~~~~~~--~~~~~~~-~l~~ld~vv~~a~~~Gl~VIlD~ 100 (491)
T 2y8k_A 43 DQIARVKELGFNAVHL-YAECFD--PRYPAP--GSKAPGY-AVNEIDKIVERTRELGLYLVITI 100 (491)
T ss_dssp HHHGGGGGGTCCEEEE-EEEECC--TTTTST--TCCCTTT-THHHHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEE-Cceeec--ccccCC--CccChhH-HHHHHHHHHHHHHHCCCEEEEEC
Confidence 5578889999999987 553111 123110 0233332 48899999999999999999997
|
| >2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A* | Back alignment and structure |
|---|
Probab=90.91 E-value=0.18 Score=48.98 Aligned_cols=62 Identities=11% Similarity=0.168 Sum_probs=41.0
Q ss_pred HHhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEcc
Q 014892 48 LERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVI 115 (416)
Q Consensus 48 i~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~ 115 (416)
..+.++.||++|+|+|=|+--+... -.+..-+.+++ ...+.++++|+.|+++||+||+|+--
T Consensus 71 ~~~d~~~l~~~G~n~vRl~i~w~~~----~~~~~~~~~~~--~~l~~~d~~v~~a~~~Gi~vild~h~ 132 (395)
T 2jep_A 71 TPELIKKVKAAGFKSIRIPVSYLNN----IGSAPNYTINA--AWLNRIQQVVDYAYNEGLYVIINIHG 132 (395)
T ss_dssp CHHHHHHHHHTTCCEEEECCCCGGG----BCCTTTCCBCH--HHHHHHHHHHHHHHTTTCEEEECCCG
T ss_pred cHHHHHHHHHcCCCEEEEeeeeccc----cCCCCCCccCH--HHHHHHHHHHHHHHHCCCEEEEECCC
Confidence 4567889999999999885322210 00000112221 12577999999999999999999743
|
| >4awe_A Endo-beta-D-1,4-mannanase; hydrolase, endo-mannanase, glycosyl hydrolase, GH5; HET: NAG; 1.40A {Neurospora sitophila} | Back alignment and structure |
|---|
Probab=90.81 E-value=0.36 Score=45.25 Aligned_cols=91 Identities=11% Similarity=0.137 Sum_probs=55.1
Q ss_pred cCceeEEEeeecCCCCCCcHHHHHhhhhhHHHcCCCEEEeCCCCCCC---CCCCccccc--------CCCC----CCCCC
Q 014892 26 NGREILFQGFNWESCKHDWWRNLERKVPDISKSGFTSVWLPPATHSF---APEGYLPQN--------LYSL----NSSYG 90 (416)
Q Consensus 26 ~~~~~~~q~f~~~~~~~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~---~~~GY~~~d--------~~~i----d~~~G 90 (416)
+|..+.+.++..-...-.+-..+.+.|+.+|++|+|+|=+--..+.. ....|...+ .... .+.++
T Consensus 17 nG~~~~~~G~N~~~~~~~~~~~~~~~l~~~~~~G~N~iR~w~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (387)
T 4awe_A 17 DGKDFYFAGSNAYYFPFNDQPDIEKGMTAARAAGLTVFRTWGFNDKNRTYIPTGLPQYGNEGAGDPTNTVFQWFEADGTQ 96 (387)
T ss_dssp TTEECCEEEEECTTGGGSCHHHHHHHHHHHHHTTCCEEEEECCCEEESSCCTTCSSCCCCCTTCCTTCCCSEEECTTSCE
T ss_pred CCEEEEEEEEccCcCCCCCHHHHHHHHHHHHhCCCCEEEeCcccCCCccCccccchhhhccccccccchhhhhcccCccc
Confidence 78888899987321222356778899999999999999763221110 001111111 0000 01111
Q ss_pred --CHHHHHHHHHHHHHCCCEEEEEEccc
Q 014892 91 --SEHLLKALLHKMKQHKVRAMADIVIN 116 (416)
Q Consensus 91 --t~~d~~~Lv~~aH~~Gi~VilD~V~N 116 (416)
..+.+..++++|.++||+||+++..+
T Consensus 97 ~~~~~~~d~~~~~a~~~gi~v~~~~~~~ 124 (387)
T 4awe_A 97 TIDVSPFDKVVDSATKTGIKLIVALTNN 124 (387)
T ss_dssp EECCGGGHHHHHHHHHHTCEEEEECCBS
T ss_pred hhhhhhHHHHHHHHHHcCCEEEEeeccc
Confidence 13557899999999999999998543
|
| >1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=90.58 E-value=0.23 Score=45.87 Aligned_cols=79 Identities=13% Similarity=0.178 Sum_probs=49.8
Q ss_pred cCceeEEEeeecCCCCCCc--HHH-HHhhhhhHH-HcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCHHHHHHHHHH
Q 014892 26 NGREILFQGFNWESCKHDW--WRN-LERKVPDIS-KSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHK 101 (416)
Q Consensus 26 ~~~~~~~q~f~~~~~~~G~--~~g-i~~~LdyLk-~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~ 101 (416)
+|..+.++++.+--...|+ -+- ..+.++.|| ++|+|+|=+ |+... ...+|. .+|. +..+.++++|+.
T Consensus 15 nG~~~~l~Gvn~~~~~~~~~~~~~~~~~d~~~l~~~~G~N~vR~-~~~~~-~~~~~~------~~~~-~~~~~ld~~v~~ 85 (291)
T 1egz_A 15 GEKAKSFAGNSLFWSNNGWGGEKFYTADTVASLKKDWKSSIVRA-AMGVQ-ESGGYL------QDPA-GNKAKVERVVDA 85 (291)
T ss_dssp TTEECCCEEEEEEECCTTSSGGGGCSHHHHHHHHHTTCCCEEEE-EEECS-STTSTT------TCHH-HHHHHHHHHHHH
T ss_pred CCCEEEEEEEeecccccccCCCccCCHHHHHHHHHHcCCCEEEE-ecccc-ccCCCc------CCHH-HHHHHHHHHHHH
Confidence 6777777777643111221 111 246788899 899999988 33321 111221 1211 235678999999
Q ss_pred HHHCCCEEEEEE
Q 014892 102 MKQHKVRAMADI 113 (416)
Q Consensus 102 aH~~Gi~VilD~ 113 (416)
|.++||+||+|+
T Consensus 86 a~~~Gi~vild~ 97 (291)
T 1egz_A 86 AIANDMYAIIGW 97 (291)
T ss_dssp HHHTTCEEEEEE
T ss_pred HHHCCCEEEEEc
Confidence 999999999997
|
| >2y8v_A CHIC, class III chitinase, putative; afchic, hydrolase; 1.99A {Aspergillus fumigatus} | Back alignment and structure |
|---|
Probab=90.34 E-value=2.4 Score=39.11 Aligned_cols=84 Identities=12% Similarity=0.063 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHHHCCCEEEEEEccccCcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCH
Q 014892 92 EHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQH 171 (416)
Q Consensus 92 ~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~ 171 (416)
...+.+.|++||++|+||++=+ +. |... .|. .+ ..++
T Consensus 71 ~~~~~~~i~~~k~~g~kvllSi-----GG------------------~~~~----------------~fs---~~-~~~~ 107 (290)
T 2y8v_A 71 YNPLWAEVPVLKRSGVKVMGML-----GG------------------AAQG----------------SYR---CL-DGDQ 107 (290)
T ss_dssp GHHHHHHHHHHHHTTCEEEEEE-----EC------------------SSTT----------------TTG---GG-SSCH
T ss_pred HHHHHHHHHHHHHCCCEEEEEE-----CC------------------CCCC----------------Cch---hc-cCCH
Confidence 3578888999999999999954 11 1000 000 01 1357
Q ss_pred HHHHHHHHHHHHHHHhcCCCeEEecccCCCc----HHHHHHHHHhcCCceE
Q 014892 172 FVRKDIIAWLRWLRNTVGFQDFRFDFARGYS----AKYVKEYIEGARPIFS 218 (416)
Q Consensus 172 ~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~----~~~~~~~~~~~~~~~~ 218 (416)
+-|+.+++.+..+++++|+||+-+|-=.... ..++++++++..+.++
T Consensus 108 ~~r~~f~~s~~~~~~~~~~DGiDiDwE~p~~~~~~~~ll~~Lr~~~~~~~~ 158 (290)
T 2y8v_A 108 EKFERYYQPLLAMVRRHQLDGLDLDVEEEMSLPGIIRLIDRLKLDLGDDFI 158 (290)
T ss_dssp HHHHHHHHHHHHHHHHHTCSEEEEECCSCBCHHHHHHHHHHHHHHHCTTSE
T ss_pred HHHHHHHHHHHHHHHHhCCCeEEEcccccchHHHHHHHHHHHHHHhCCCEE
Confidence 7888889988888899999999999754433 2466777776654343
|
| >1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=90.22 E-value=0.61 Score=44.73 Aligned_cols=63 Identities=13% Similarity=0.152 Sum_probs=41.3
Q ss_pred cHHHHHhhhhhH-----HHcCCCEEEeCCCCCCCCCCCcccccCCCCCCC-CCCHHHHHHHHHHHHHCCCEEEE
Q 014892 44 WWRNLERKVPDI-----SKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSS-YGSEHLLKALLHKMKQHKVRAMA 111 (416)
Q Consensus 44 ~~~gi~~~LdyL-----k~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~-~Gt~~d~~~Lv~~aH~~Gi~Vil 111 (416)
+-+.+.+.+|.+ +++|+..|.|==-+....... --|+ .++|. |- ..++.|++.+|++|||+.+
T Consensus 24 ~e~~i~~~ad~~~~~gl~~~G~~~v~iDdgW~~~~rd~--~G~~-~~~~~~FP--~Gl~~l~~~ih~~Glk~Gi 92 (362)
T 1uas_A 24 NEQIIRETADALVNTGLAKLGYQYVNIDDCWAEYSRDS--QGNF-VPNRQTFP--SGIKALADYVHAKGLKLGI 92 (362)
T ss_dssp CHHHHHHHHHHHHHTSHHHHTCCEEECCSSCBCSSCCT--TSCC-CBCTTTCT--TCHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHHHHcCchhcCCcEEEECCCcCCCCCCC--CCCe-eEChhccC--ccHHHHHHHHHHCCCEeEE
Confidence 577788888887 999999998722221110000 1233 44433 52 2599999999999999876
|
| >3gyc_A Putative glycoside hydrolase; YP_001304622.1, structural GEN joint center for structural genomics, JCSG; HET: MSE; 1.85A {Parabacteroides distasonis atcc 8503} | Back alignment and structure |
|---|
Probab=90.17 E-value=0.3 Score=45.14 Aligned_cols=66 Identities=11% Similarity=0.241 Sum_probs=43.0
Q ss_pred CCcHHHHHhhhhhHHHcCCCEEEe--CCCC--CCCCCC-C----c-----ccccCCCCCCCCCCHHHHHHHHHHHHHCCC
Q 014892 42 HDWWRNLERKVPDISKSGFTSVWL--PPAT--HSFAPE-G----Y-----LPQNLYSLNSSYGSEHLLKALLHKMKQHKV 107 (416)
Q Consensus 42 ~G~~~gi~~~LdyLk~LGv~~I~L--~Pi~--~~~~~~-G----Y-----~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi 107 (416)
++=|..+...++.+++.|+|+|=| ||.. .+++.- - | ++..-+.|+ ....|.+|.++||++|+
T Consensus 33 Gepf~DLD~afdEavERGYNTVRIcAmP~LLf~~p~~l~~l~pl~gQrrW~~pg~~evd----gr~~L~elf~aAk~hd~ 108 (393)
T 3gyc_A 33 GAGYEDWDQVLDELSERGYNAIRIDAYPHLIAENPMKKWLLKEVWNQQDWGSPDMNEVQ----VQPNLNLFLSKCKERDI 108 (393)
T ss_dssp TSSCSCHHHHHHHHHHTTCCEEEEECCHHHHHHCTTCCEEECCSCSSSSSSCSSCEEEC----CTTHHHHHHHHHHHTTC
T ss_pred CCChhHHHHHHHHHHHcCCCeEEeccccceeecCCcchhhccccccccccCCCCCceec----hHHHHHHHHHHHHHcCC
Confidence 345666778899999999999976 4432 222111 0 1 111111222 24679999999999999
Q ss_pred EEEE
Q 014892 108 RAMA 111 (416)
Q Consensus 108 ~Vil 111 (416)
+||+
T Consensus 109 ~ViL 112 (393)
T 3gyc_A 109 KVGL 112 (393)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9999
|
| >4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A* | Back alignment and structure |
|---|
Probab=89.10 E-value=0.2 Score=48.08 Aligned_cols=76 Identities=18% Similarity=0.276 Sum_probs=49.7
Q ss_pred ccCceeEEEeeecCCC----CCCcHHHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCHHHHHHHHH
Q 014892 25 RNGREILFQGFNWESC----KHDWWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLH 100 (416)
Q Consensus 25 ~~~~~~~~q~f~~~~~----~~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~ 100 (416)
.+|..+.++++.+--. .+|.+ ..+.++.||++|+|+|=+. +.... +.+.. ++ ...+.+.++|+
T Consensus 62 ~nG~~~~l~Gvn~~~~~~~~~~g~~--~~~di~~ik~~G~N~VRi~-~~~~~----~~~~~----~~--~~l~~ld~~v~ 128 (359)
T 4hty_A 62 EQGKTIVFRGVNISDPDKIDKDKRF--SKKHFEVIRSWGANVVRVP-VHPRA----WKERG----VK--GYLELLDQVVA 128 (359)
T ss_dssp TTCCEECCEEEEECCHHHHHHTTCC--SHHHHHHHHHTTCSEEEEE-ECHHH----HHHHH----HH--HHHHHHHHHHH
T ss_pred CCCCEEEEEEEecCCcccCCCCCCc--CHHHHHHHHhcCCCEEEEe-ccHHH----hhccC----CH--HHHHHHHHHHH
Confidence 5788888888886410 01222 1456788999999999984 33210 00000 00 12567899999
Q ss_pred HHHHCCCEEEEEE
Q 014892 101 KMKQHKVRAMADI 113 (416)
Q Consensus 101 ~aH~~Gi~VilD~ 113 (416)
.|.++||+||+|+
T Consensus 129 ~a~~~Gi~Vild~ 141 (359)
T 4hty_A 129 WNNELGIYTILDW 141 (359)
T ss_dssp HHHHTTCEEEEEE
T ss_pred HHHHCCCEEEEEc
Confidence 9999999999997
|
| >3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A* | Back alignment and structure |
|---|
Probab=88.95 E-value=0.74 Score=47.48 Aligned_cols=65 Identities=9% Similarity=0.164 Sum_probs=40.5
Q ss_pred cHHHHHhhhhhH-----HHcCCCEEEeCCCCCCCCCCCcccccCCCCCC-CCCCHHHHHHHHHHHHHCCCEEEEEE
Q 014892 44 WWRNLERKVPDI-----SKSGFTSVWLPPATHSFAPEGYLPQNLYSLNS-SYGSEHLLKALLHKMKQHKVRAMADI 113 (416)
Q Consensus 44 ~~~gi~~~LdyL-----k~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~-~~Gt~~d~~~Lv~~aH~~Gi~VilD~ 113 (416)
+-+.+.+.+|.+ +++|+..|.|===+.......+ -|+ .++| +|-+ .++.|++.+|++|||+.+=+
T Consensus 27 ~~~~~~~~ad~~~~~g~~~~G~~~~~iDdgW~~~~~d~~--g~~-~~~~~~fP~--gl~~l~~~i~~~Glk~gi~~ 97 (614)
T 3a21_A 27 DYSVIKKQVDAFVAAGLPAAGYTYINIDEGWWQGTRDSA--GNI-TVDTAEWPG--GMSAITAYIHSKGLKAGIYT 97 (614)
T ss_dssp CHHHHHHHHHHHHHTTHHHHTCCEEECCTTSCCSCBCTT--CCB-CCCTTTSTT--CHHHHHHHHHHTTCEEEEEE
T ss_pred CHHHHHHHHHHHHHcCHHhhCCEEEEECCCcCCCCcCCC--CCE-EECccccCC--cHHHHHHHHHHCCCeeEEEe
Confidence 566667777765 9999999987211111100001 232 4554 3632 59999999999999987733
|
| >7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A | Back alignment and structure |
|---|
Probab=88.78 E-value=0.52 Score=43.86 Aligned_cols=76 Identities=13% Similarity=0.246 Sum_probs=48.5
Q ss_pred ccCceeEEEeeecCCCCCCcHHHH--HhhhhhHH-HcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCHHHHHHHHHH
Q 014892 25 RNGREILFQGFNWESCKHDWWRNL--ERKVPDIS-KSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHK 101 (416)
Q Consensus 25 ~~~~~~~~q~f~~~~~~~G~~~gi--~~~LdyLk-~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~ 101 (416)
.+|..+.+++..+- ...++... .+.++.|+ ++|+|+|=|+ +... ..|| ..+|. -.+.++++|+.
T Consensus 22 ~nG~~v~lrGvn~~--~~~~~~~~~~~~~~~~l~~~~G~N~VRip-~~~~--~~~~------~~~~~--~~~~ld~~v~~ 88 (303)
T 7a3h_A 22 ERGEQVQLKGMSSH--GLQWYGQFVNYESMKWLRDDWGINVFRAA-MYTS--SGGY------IDDPS--VKEKVKEAVEA 88 (303)
T ss_dssp TTSCBCCCEEEEES--CHHHHGGGCSHHHHHHHHHHTCCCEEEEE-EESS--TTST------TTCTT--HHHHHHHHHHH
T ss_pred CCCCEEEEEEeccC--ccccccccCCHHHHHHHHHhcCCCEEEEE-EEeC--CCCc------cCCHH--HHHHHHHHHHH
Confidence 36777777777432 00011111 24567787 8999999773 2221 1233 23444 47889999999
Q ss_pred HHHCCCEEEEEE
Q 014892 102 MKQHKVRAMADI 113 (416)
Q Consensus 102 aH~~Gi~VilD~ 113 (416)
|.++||+||+|+
T Consensus 89 a~~~Gi~Vild~ 100 (303)
T 7a3h_A 89 AIDLDIYVIIDW 100 (303)
T ss_dssp HHHHTCEEEEEE
T ss_pred HHHCCCEEEEEe
Confidence 999999999998
|
| >3poh_A Endo-beta-N-acetylglucosaminidase F1; TIM barrel, structural genomics, joint center for structural genomics, JCSG; 1.55A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=88.73 E-value=0.97 Score=44.44 Aligned_cols=75 Identities=15% Similarity=0.209 Sum_probs=54.0
Q ss_pred HHHHHHHHHCCCEEEEEEccccCcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHH
Q 014892 96 KALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRK 175 (416)
Q Consensus 96 ~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~ 175 (416)
.++|+.+|++|+||+|-+==+|.+.. | ..+ +++-|+
T Consensus 231 ~~~v~~lq~~glKVllSIgGg~~~~g--------------------------------------f---~~l---s~~~r~ 266 (451)
T 3poh_A 231 ETLLQPLRRRGVKVLLGLLGNHDITG--------------------------------------L---AQL---SEQGAK 266 (451)
T ss_dssp HHHTHHHHHTTCEEEEEEECCSSSCC--------------------------------------T---TCB---CHHHHH
T ss_pred HHHHHHHHHCCCEEEEEECcCCCCCC--------------------------------------c---ccC---CHHHHH
Confidence 68889999999999996633332220 1 112 578899
Q ss_pred HHHHHHHHHHHhcCCCeEEecccC------CC------c----HHHHHHHHHhcC
Q 014892 176 DIIAWLRWLRNTVGFQDFRFDFAR------GY------S----AKYVKEYIEGAR 214 (416)
Q Consensus 176 ~l~~~~~~w~~~~gvDGfRlD~a~------~~------~----~~~~~~~~~~~~ 214 (416)
.+.+.++..++.+|.||+-+|-=. .. . ..+++++++++.
T Consensus 267 ~Fa~~v~~~v~~yglDGIDiDwEYp~~~~~g~~~~~~~d~~nf~~Ll~eLR~~lp 321 (451)
T 3poh_A 267 DFAREVAQYCKAYNLDGVNYDDEYSNSPDLSNPSLTNPSTAAAARLCYETKQAMP 321 (451)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCSCCCCCTTSTTBCSCCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHhCCCcEEEeccCCCCCCCCCCCcCCCCHHHHHHHHHHHHHhCC
Confidence 999999999999999999999421 11 1 347778888874
|
| >2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A* | Back alignment and structure |
|---|
Probab=88.46 E-value=1.2 Score=45.19 Aligned_cols=68 Identities=10% Similarity=0.283 Sum_probs=48.1
Q ss_pred cCceeEEEeeecCC------CCCC-------------cHHHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCC
Q 014892 26 NGREILFQGFNWES------CKHD-------------WWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLN 86 (416)
Q Consensus 26 ~~~~~~~q~f~~~~------~~~G-------------~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id 86 (416)
+|..+++++..+.- +..| +-+.+.+-+..||++|+|+|=+ |.++
T Consensus 48 NG~~f~lkGVny~p~~~~~~~~~G~~~~~~~~~d~l~~~e~~~rDi~LmK~~GiN~VRv-----------------y~~~ 110 (555)
T 2w61_A 48 SGEQFFIKGIAYQLQRSEEELSNANGAFETSYIDALADPKICLRDIPFLKMLGVNTLRV-----------------YAID 110 (555)
T ss_dssp TCCBCCEEEEECCCCCC------CTTTTCCSSCCGGGCHHHHHHHHHHHHHHTCSEEEE-----------------CCCC
T ss_pred CCeEEEEEEEECCCcccccccccCCccccccccccCCCHHHHHHHHHHHHHcCCCEEEE-----------------eccC
Confidence 67777778776542 0102 3467778899999999999988 1333
Q ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEc
Q 014892 87 SSYGSEHLLKALLHKMKQHKVRAMADIV 114 (416)
Q Consensus 87 ~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V 114 (416)
|.-+. .++++.|++.||.||+|+-
T Consensus 111 P~~~~----d~~ldl~~~~GIyVIle~~ 134 (555)
T 2w61_A 111 PTKSH----DICMEALSAEGMYVLLDLS 134 (555)
T ss_dssp TTSCC----HHHHHHHHHTTCEEEEESC
T ss_pred CCCCh----HHHHHHHHhcCCEEEEeCC
Confidence 43333 4677889999999999973
|
| >2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A* | Back alignment and structure |
|---|
Probab=87.77 E-value=0.46 Score=44.23 Aligned_cols=77 Identities=13% Similarity=0.290 Sum_probs=48.6
Q ss_pred ccCceeEEEeeecCCCCCCcHH--HHHhhhhhHH-HcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCHHHHHHHHHH
Q 014892 25 RNGREILFQGFNWESCKHDWWR--NLERKVPDIS-KSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHK 101 (416)
Q Consensus 25 ~~~~~~~~q~f~~~~~~~G~~~--gi~~~LdyLk-~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~ 101 (416)
.+|..+.++++.+-- ..++. -..+.++.|+ ++|+|+|=| |+.-. ..|| .++|. +-.+.++++|+.
T Consensus 21 ~~G~~v~l~Gvn~~~--~~w~~~~~~~~d~~~l~~~~G~N~vRi-~~~~~--~~~~------~~~~~-~~l~~ld~~v~~ 88 (306)
T 2cks_A 21 EHGNPVQLRGMSTHG--IQWFDHCLTDSSLDALAYDWKADIIRL-SMYIQ--EDGY------ETNPR-GFTDRMHQLIDM 88 (306)
T ss_dssp TTSCBCCCEEEECCC--HHHHGGGCSHHHHHHHHHTSCCSEEEE-EEESS--TTSG------GGCHH-HHHHHHHHHHHH
T ss_pred CCCCEEEEEEEecCc--ccccCcCCCHHHHHHHHHHcCCCEEEE-Eeeec--CCCc------ccCHH-HHHHHHHHHHHH
Confidence 367777788875420 00110 0135577785 699999988 44321 1233 23332 125789999999
Q ss_pred HHHCCCEEEEEE
Q 014892 102 MKQHKVRAMADI 113 (416)
Q Consensus 102 aH~~Gi~VilD~ 113 (416)
|.++||+||+|+
T Consensus 89 a~~~Gl~vild~ 100 (306)
T 2cks_A 89 ATARGLYVIVDW 100 (306)
T ss_dssp HHTTTCEEEEEE
T ss_pred HHHCCCEEEEEe
Confidence 999999999996
|
| >1edt_A Endo-beta-N-acetylglucosaminidase H, endo H; hydrolase (glucosidase); 1.90A {Streptomyces plicatus} SCOP: c.1.8.5 PDB: 1c90_A 1c8x_A 1c91_A 1c3f_A 1c92_A 1c8y_A 1c93_A | Back alignment and structure |
|---|
Probab=87.42 E-value=1 Score=41.25 Aligned_cols=46 Identities=11% Similarity=-0.005 Sum_probs=34.9
Q ss_pred CHHHHHHHHHHHHHHHHhcCCCeEEecccCCC-------------cHHHHHHHHHhcCC
Q 014892 170 QHFVRKDIIAWLRWLRNTVGFQDFRFDFARGY-------------SAKYVKEYIEGARP 215 (416)
Q Consensus 170 ~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~-------------~~~~~~~~~~~~~~ 215 (416)
+++-|+.+++.+..+++++|+||+=+|-=..- -..+++++++++..
T Consensus 104 s~~~r~~f~~s~~~~~~~~~fDGiDiDwE~p~~~~~g~~~~d~~~~~~ll~eLr~~l~~ 162 (271)
T 1edt_A 104 SQQAASAFAKQLSDAVAKYGLDGVDFDDEYAEYGNNGTAQPNDSSFVHLVTALRANMPD 162 (271)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCCEEEEECSSCCTTGGGCCCCCSSHHHHHHHHHHHHCTT
T ss_pred CHHHHHHHHHHHHHHHHHhCCCeEEEecccCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
Confidence 68889999999988889999999999953210 13477777777743
|
| >2ebn_A Endo-beta-N-acetylglucosaminidase F1; hydrolase(glucosidase); 2.00A {Elizabethkingia meningoseptica} SCOP: c.1.8.5 | Back alignment and structure |
|---|
Probab=87.41 E-value=1.6 Score=40.35 Aligned_cols=76 Identities=16% Similarity=0.182 Sum_probs=52.4
Q ss_pred HHHHHHHHHHCCCEEEEEEccccCcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHH
Q 014892 95 LKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVR 174 (416)
Q Consensus 95 ~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~ 174 (416)
+.+.|+.++++|+||+|=+==+|.+.. +.. +. ++-|
T Consensus 73 ~~~~i~~lq~~glKVllSIGG~~~~~g--------------------------------------~~~---l~---~~~r 108 (289)
T 2ebn_A 73 RAKYLKPLQDKGIKVILSILGNHDRSG--------------------------------------IAN---LS---TARA 108 (289)
T ss_dssp HHHHTHHHHHTTCEEEEEEECCSSSCC--------------------------------------TTC---BC---HHHH
T ss_pred hHHHHHHHHhCCCEEEEEeCCCCCCCC--------------------------------------eec---CC---HHHH
Confidence 567888999999999997633332110 001 11 6778
Q ss_pred HHHHHHHHHHHHhcCCCeEEecccC---------CC---c----HHHHHHHHHhcC
Q 014892 175 KDIIAWLRWLRNTVGFQDFRFDFAR---------GY---S----AKYVKEYIEGAR 214 (416)
Q Consensus 175 ~~l~~~~~~w~~~~gvDGfRlD~a~---------~~---~----~~~~~~~~~~~~ 214 (416)
+.+++.+.-+++++|.||+=+|-=. .. . ..+++++++++.
T Consensus 109 ~~Fa~sv~~~v~~ygfDGiDiDwEyp~~~~~g~~g~~~~d~~n~~~Ll~eLR~~l~ 164 (289)
T 2ebn_A 109 KAFAQELKNTCDLYNLDGVFFDDEYSAYQTPPPSGFVTPSNNAAARLAYETKQAMP 164 (289)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEECCSCCCCSSCCTTBCCCCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHhCCCcEEEeeecCCCCccCCCCCCCccHHHHHHHHHHHHHHCC
Confidence 9999999999999999999999532 11 1 236777777773
|
| >4h41_A Putative alpha-L-fucosidase; hydrolase, carbohydrate metabolism, HOST glycans, structural genomics; HET: MSE 1PE PE4 PG4 PG6; 1.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=87.25 E-value=0.95 Score=42.89 Aligned_cols=82 Identities=7% Similarity=0.133 Sum_probs=51.6
Q ss_pred eeEEEeeecCCCCCC-cHHHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCcccc--cCCCCCCCC-CCHHHHHHHHHHHHH
Q 014892 29 EILFQGFNWESCKHD-WWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQ--NLYSLNSSY-GSEHLLKALLHKMKQ 104 (416)
Q Consensus 29 ~~~~q~f~~~~~~~G-~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~--d~~~id~~~-Gt~~d~~~Lv~~aH~ 104 (416)
+++++-+.++.++.. |-+.=.+.+.++|++|++.|-|+=. .+.|+... -+..-...+ ...+-++.++++|++
T Consensus 36 gtfld~~~~d~~~qnWd~~eW~~~~~~mK~~GikyvIl~~~----~~~gf~~~pS~~~~~~~~~~p~~Dlv~~~l~aa~k 111 (340)
T 4h41_A 36 GTFLDEISHDIPHQNWGEKEWDLDFQHMKRIGIDTVIMIRS----GYRKFMTYPSPYLLKKGCYMPSVDLVDMYLRLAEK 111 (340)
T ss_dssp EEEECTTCSSSCCCCCCHHHHHHHHHHHHHTTCCEEEESCS----EETTEESSCCHHHHHTTCCCCSBCHHHHHHHHHHH
T ss_pred EEEehhhcCCCcccCCCHHHHHHHHHHHHHcCCCEEEEEEE----eeCCeeccCcccccccCccCCcccHHHHHHHHHHH
Confidence 566776667766543 4445557788999999999987522 23343321 110000111 134568899999999
Q ss_pred CCCEEEEEEc
Q 014892 105 HKVRAMADIV 114 (416)
Q Consensus 105 ~Gi~VilD~V 114 (416)
+||+|++-+-
T Consensus 112 ~Gmkv~~Gly 121 (340)
T 4h41_A 112 YNMKFYFGLY 121 (340)
T ss_dssp TTCEEEEECC
T ss_pred hCCeEEEecC
Confidence 9999999663
|
| >4ac1_X Endo-N-acetyl-beta-D-glucosaminidase; hydrolase, glycoside hydrolase family 18, deglycosylation; HET: NAG; 1.30A {Hypocrea jecorina} | Back alignment and structure |
|---|
Probab=87.15 E-value=3.7 Score=37.71 Aligned_cols=116 Identities=16% Similarity=0.125 Sum_probs=66.8
Q ss_pred cCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccccCcCCCCCCCCcccccCCCCC
Q 014892 58 SGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPL 137 (416)
Q Consensus 58 LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~~~~ 137 (416)
.++|+|-+.=+.-. ..|+-.. ....|.-...+++.+=|++||++|+||++=+ |... .+.+..+
T Consensus 31 ~~~THi~~af~~~~--~~g~i~~--~d~~p~~~~~~~l~~~i~~~q~~g~Kvllsi-----GG~~---~g~~~~~----- 93 (283)
T 4ac1_X 31 IALTHLIVCSFHIN--QGGVVHL--NDFPPDDPHFYTLWNETITMKQAGVKVMGMV-----GGAA---PGSFNTQ----- 93 (283)
T ss_dssp CCCCEEEEEEEECC--TTSCCEE--TTBCTTSGGGHHHHHHHHHHHHTTCEEEEEE-----ETTS---SCSSSTT-----
T ss_pred CCccEEEEEEEEEC--CCCeEEE--CCCCccchHHHHHHHHHHHHHcCCCEEEEEE-----cCCC---CCCCccc-----
Confidence 57899887644433 2343211 1222222233556667889999999999954 1100 0000000
Q ss_pred CCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcHH----HHHHHHHhc
Q 014892 138 SWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAK----YVKEYIEGA 213 (416)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~~----~~~~~~~~~ 213 (416)
..+..+++.++.+...+...++++|+||+-+|-=...... ++++++++.
T Consensus 94 ---------------------------~~~~~~~~~~~~f~~~~~~~~~~~~~dG~D~d~e~~~~~~~~~~li~~Lr~~~ 146 (283)
T 4ac1_X 94 ---------------------------TLDSPDSATFEHYYGQLRDAIVNFQLEGMDLDVEQPMSQQGIDRLIARLRADF 146 (283)
T ss_dssp ---------------------------TTTCSSHHHHHHHHHHHHHHHHHTTCSEEEEECCSCBCHHHHHHHHHHHHHHH
T ss_pred ---------------------------ccccccHHHHHHHHHHHHHHHHHcCCCceEeecccCCCHHHHHHHHHHHHHHc
Confidence 0122346667777777777778999999999987666544 445555555
Q ss_pred CCce
Q 014892 214 RPIF 217 (416)
Q Consensus 214 ~~~~ 217 (416)
.+.+
T Consensus 147 g~~~ 150 (283)
T 4ac1_X 147 GPDF 150 (283)
T ss_dssp CTTS
T ss_pred CCCc
Confidence 4433
|
| >2x2h_A Alpha-1,4-glucan lyase isozyme 1; anhydrofructose pathway, glycoside hydrolase family 3 starch binding domain; 2.06A {Gracilariopsis lemaneiformis} PDB: 2x2i_A* 2x2j_A* | Back alignment and structure |
|---|
Probab=86.43 E-value=0.37 Score=52.58 Aligned_cols=32 Identities=16% Similarity=-0.027 Sum_probs=29.2
Q ss_pred CCCCCHHHHHHHHHHHHHHHHhcCCCeEEeccc
Q 014892 166 IDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFA 198 (416)
Q Consensus 166 ln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a 198 (416)
+||.||++++...+.++.+. +.|||||=+|+-
T Consensus 513 pDFtnp~a~~WW~~~~k~l~-~~GvDg~W~Dmn 544 (1027)
T 2x2h_A 513 PDWGRPDVAEWWGNNYKKLF-SIGLDFVWQDMT 544 (1027)
T ss_dssp BCTTSTTHHHHHHHTTHHHH-TTTCCEEEECST
T ss_pred cCCCCHHHHHHHHHHHHHHh-hCCCCEEEEcCC
Confidence 67899999999999998887 899999999985
|
| >2zxd_A Alpha-L-fucosidase, putative; TIM barrel, hydrolase; HET: ZXD; 2.15A {Thermotoga maritima} PDB: 2zwy_A* 2zx5_A* 2zx6_A* 2zx7_A* 2zwz_A* 2zx9_A* 2zxa_A* 2zxb_A* 2zx8_A* 1hl9_A* 1hl8_A* 1odu_A* 2wsp_A* | Back alignment and structure |
|---|
Probab=85.67 E-value=3.9 Score=40.39 Aligned_cols=120 Identities=10% Similarity=-0.147 Sum_probs=71.5
Q ss_pred HHhhhhhHHHcCCCEEEeCCCCCCC-CCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccccCcCCCCCCC
Q 014892 48 LERKVPDISKSGFTSVWLPPATHSF-APEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHG 126 (416)
Q Consensus 48 i~~~LdyLk~LGv~~I~L~Pi~~~~-~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~ 126 (416)
..+-++-+|+.|+..|-|+-=+... ..+.=..+++..++... ..+=+++|+++|+++||++.+= .|...+|
T Consensus 107 p~~Wa~~~k~AGakyvvlTaKHHDGF~lwpSk~t~~ns~~~~p-krDlv~El~~A~rk~Glk~GlY-----~S~~~dW-- 178 (455)
T 2zxd_A 107 PQEWADLFKKAGAKYVIPTTKHHDGFCLWGTKYTDFNSVKRGP-KRDLVGDLAKAVREAGLRFGVY-----YSGGLDW-- 178 (455)
T ss_dssp HHHHHHHHHHTTCSEEEEEEECTTCCBSSCCSSCSCBTTTSTT-CSCHHHHHHHHHHHTTCEEEEE-----EECSCCG--
T ss_pred HHHHHHHHHHhCCCEEEEEeeccCCccccCCCCCCCcccccCC-CCChHHHHHHHHHHcCCeEEEE-----ecCCccc--
Confidence 3455788999999999987533211 11111122444444322 4577999999999999999982 1111111
Q ss_pred CcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccC
Q 014892 127 GKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFAR 199 (416)
Q Consensus 127 ~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~ 199 (416)
+.. ..|..... + .+... -.++...+++..-++-++..||.|++=+|...
T Consensus 179 -----~~p--~~~~~~~~----~---------~y~~~----~~~~~y~~~~~~Ql~ELlt~Y~pd~lWfDg~~ 227 (455)
T 2zxd_A 179 -----RFT--TEPIRYPE----D---------LSYIR----PNTYEYADYAYKQVMELVDLYLPDVLWNDMGW 227 (455)
T ss_dssp -----GGC--CSCCCSGG----G---------GGTCS----CCSHHHHHHHHHHHHHHHHHHCCSEEEEESCC
T ss_pred -----cCc--cccccccc----c---------cccCC----CccHHHHHHHHHHHHHHHhhcCCcEEEECCCC
Confidence 110 00110000 0 00000 13678899999999999999999999999764
|
| >1eok_A Endo-beta-N-acetylglucosaminidase F3; alpha/beta-barrel, hydrolase; 1.80A {Elizabethkingia meningoseptica} SCOP: c.1.8.5 PDB: 1eom_A* | Back alignment and structure |
|---|
Probab=85.55 E-value=0.93 Score=41.94 Aligned_cols=65 Identities=6% Similarity=0.077 Sum_probs=43.2
Q ss_pred CCHHHHHHHHHHHHHCCCEEEEEEccccCcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCC
Q 014892 90 GSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHT 169 (416)
Q Consensus 90 Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~ 169 (416)
...+++++.|++||++|+||++=+= . . . .|. .. ...
T Consensus 63 ~~~~~~~~~i~~~q~~g~KVllSIG-----G-~----~---~~~-------~~------------------------~~~ 98 (290)
T 1eok_A 63 KSYKDLDTQIRSLQSRGIKVLQNID-----D-D----V---SWQ-------SS------------------------KPG 98 (290)
T ss_dssp SSHHHHHHHHHHHHTTTCEEEEEEE-----C-C----G---GGG-------SS------------------------SGG
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEeC-----C-C----c---CCC-------Cc------------------------ccc
Confidence 3457888999999999999999651 1 0 0 011 00 001
Q ss_pred CHHHHHHHHHHHHH-HHHhcCCCeEEeccc
Q 014892 170 QHFVRKDIIAWLRW-LRNTVGFQDFRFDFA 198 (416)
Q Consensus 170 ~~~v~~~l~~~~~~-w~~~~gvDGfRlD~a 198 (416)
+++-|+.+++.+.. +++++|+||+=+|-=
T Consensus 99 ~~~~r~~fa~s~~~~~l~~yg~DGiDiDwE 128 (290)
T 1eok_A 99 GFASAAAYGDAIKSIVIDKWKLDGISLDIE 128 (290)
T ss_dssp GSSSHHHHHHHHHHHHTTTTCCCEEEEECC
T ss_pred chhHHHHHHHHHHHHHHHhcCCCcEEEecC
Confidence 11236777777776 888999999999953
|
| >1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A* | Back alignment and structure |
|---|
Probab=85.35 E-value=2.2 Score=41.72 Aligned_cols=63 Identities=10% Similarity=0.010 Sum_probs=40.8
Q ss_pred cHHHHHhhhhhH-----HHcCCCEEEeCCCCCCCCCCCcccccCCCCCC-CCCCHHHHHHHHHHHHHCCCEEEE
Q 014892 44 WWRNLERKVPDI-----SKSGFTSVWLPPATHSFAPEGYLPQNLYSLNS-SYGSEHLLKALLHKMKQHKVRAMA 111 (416)
Q Consensus 44 ~~~gi~~~LdyL-----k~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~-~~Gt~~d~~~Lv~~aH~~Gi~Vil 111 (416)
+-+.|.+.++.+ +++|+..|.|===+......+ .-|+ .++| +|-+ .++.|++.+|++|||+.+
T Consensus 27 ~e~~i~~~ad~~~~~gl~~~G~~~~~iDdgW~~~~~d~--~G~~-~~~~~kFP~--Gl~~l~~~i~~~Glk~Gi 95 (417)
T 1szn_A 27 DESKFLSAAELIVSSGLLDAGYNYVNIDDCWSMKDGRV--DGHI-APNATRFPD--GIDGLAKKVHALGLKLGI 95 (417)
T ss_dssp CHHHHHHHHHHHHHTTHHHHTCCEEECCSSCBCTTCCB--TTBC-CBCTTTCTT--HHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHHHHcCchhhCCCEEEECCCccCCCCCC--CCCE-EECcccCCc--CHHHHHHHHHHcCCEEEE
Confidence 567777777777 999999998722111111011 1132 3443 3533 799999999999999876
|
| >1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1 | Back alignment and structure |
|---|
Probab=85.22 E-value=2.3 Score=38.15 Aligned_cols=101 Identities=10% Similarity=0.104 Sum_probs=68.7
Q ss_pred HHhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccccCcCCCCCCCC
Q 014892 48 LERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGG 127 (416)
Q Consensus 48 i~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~ 127 (416)
+.+-|.+.|+|||++|+++- |.-. + +.++..++|+.++++|++|+..+ +...+
T Consensus 87 ~~~yl~~~k~lGf~~iEiS~--------G~i~-----l-----~~~~~~~~I~~~~~~G~~v~~Ev-----G~k~~---- 139 (251)
T 1qwg_A 87 FDEFLNECEKLGFEAVEISD--------GSSD-----I-----SLEERNNAIKRAKDNGFMVLTEV-----GKKMP---- 139 (251)
T ss_dssp HHHHHHHHHHHTCCEEEECC--------SSSC-----C-----CHHHHHHHHHHHHHTTCEEEEEE-----CCSSH----
T ss_pred HHHHHHHHHHcCCCEEEECC--------Cccc-----C-----CHHHHHHHHHHHHHCCCEEeeec-----cccCC----
Confidence 44558899999999999864 2222 2 38899999999999999998877 22100
Q ss_pred cccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEeccc---------
Q 014892 128 KYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFA--------- 198 (416)
Q Consensus 128 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a--------- 198 (416)
. . +. ..-...+++-++..+ +.|++=.-+.+=
T Consensus 140 --------------~--~---~~--------------------~~~~~~~I~~~~~~L-eAGA~~ViiEarEsG~~iGi~ 179 (251)
T 1qwg_A 140 --------------D--K---DK--------------------QLTIDDRIKLINFDL-DAGADYVIIEGRESGKGKGLF 179 (251)
T ss_dssp --------------H--H---HT--------------------TCCHHHHHHHHHHHH-HHTCSEEEECCTTTCCSSTTB
T ss_pred --------------c--c---cC--------------------CCCHHHHHHHHHHHH-HCCCcEEEEeeecccCCcccC
Confidence 0 0 00 000346777777777 889998888873
Q ss_pred ---CCCcHHHHHHHHHhcCC
Q 014892 199 ---RGYSAKYVKEYIEGARP 215 (416)
Q Consensus 199 ---~~~~~~~~~~~~~~~~~ 215 (416)
..+-.+.+.++.+.+.+
T Consensus 180 ~~~g~~r~d~v~~i~~~l~~ 199 (251)
T 1qwg_A 180 DKEGKVKENELDVLAKNVDI 199 (251)
T ss_dssp CTTSCBCHHHHHHHHTTSCG
T ss_pred CCCCCCcHHHHHHHHHhCCh
Confidence 23446777888887743
|
| >1jak_A Beta-N-acetylhexosaminidase; glycoside hydrolase, family 20, substrate-assisted catalysis, alpha/beta barrel, isofagomin inhibitor complex; HET: IFG; 1.75A {Streptomyces plicatus} SCOP: c.1.8.6 d.92.2.1 PDB: 1hp4_A* 1hp5_A* 1m01_A* 1m04_A* 1m03_A* | Back alignment and structure |
|---|
Probab=85.20 E-value=3.3 Score=41.51 Aligned_cols=126 Identities=10% Similarity=0.089 Sum_probs=74.6
Q ss_pred cHHHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCC---------CCC---CCCCCHHHHHHHHHHHHHCCCEEEE
Q 014892 44 WWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLY---------SLN---SSYGSEHLLKALLHKMKQHKVRAMA 111 (416)
Q Consensus 44 ~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~---------~id---~~~Gt~~d~~~Lv~~aH~~Gi~Vil 111 (416)
..+-|.+.||.++..++|.+++-..=.. .+.+.+..|= .+. ..+=|.+|++++|+-|.+|||+||-
T Consensus 172 ~~~~ik~~id~ma~~KlN~lh~HltDdq--~wriei~~~P~Lt~~ga~~~~~~~~~g~YT~~di~eiv~yA~~rgI~VIP 249 (512)
T 1jak_A 172 GVDEVKRYIDRVARYKYNKLHLHLSDDQ--GWRIAIDSWPRLATYGGSTEVGGGPGGYYTKAEYKEIVRYAASRHLEVVP 249 (512)
T ss_dssp CHHHHHHHHHHHHTTTCCEEEEECBCSS--CBCBCCTTSTHHHHTTTSCCTTSSCCCCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHHHHcCCcEEEEEeccCC--CceehhhhhHHHHhhcCccccCCCCCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 4788999999999999999988643111 1222221110 111 1222789999999999999999998
Q ss_pred EE-ccccCcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcC
Q 014892 112 DI-VINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVG 189 (416)
Q Consensus 112 D~-V~NH~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~g 189 (416)
.+ ++.|+..-.. .|-.+.. .......+ .++. .....||..+|++.+++.+++.-.++-|-
T Consensus 250 EID~PGH~~a~l~----aypeL~~-----~~~~~~~~-~~~~--------~~~~~l~~~~~~t~~fl~~v~~Ev~~lFp 310 (512)
T 1jak_A 250 EIDMPGHTNAALA----SYAELNC-----DGVAPPLY-TGTK--------VGFSSLCVDKDVTYDFVDDVIGELAALTP 310 (512)
T ss_dssp ECCCSSSCHHHHH----HCGGGST-----TSCCCCCC-CSCC--------CSCCCCCTTCHHHHHHHHHHHHHHHHTCC
T ss_pred ccCCCchHHHHHH----hCHHhcC-----cCCCCccc-cccC--------cCCcccCCCCHHHHHHHHHHHHHHHHhCC
Confidence 87 5667654110 0100100 00000000 0000 01124889999999999999998886443
|
| >2cho_A Glucosaminidase, hexosaminiase; O-GLCNACASE, hydrolase, N-acetylglucosamine; 1.85A {Bacteroides thetaiotaomicron} SCOP: a.246.1.1 c.1.8.10 d.92.2.3 PDB: 2chn_A 2vvn_A* 2vvs_A* 2x0h_A* 2xm2_A* 2w4x_A* 2w66_A* 2w67_A* 2wca_A* 2xj7_A* 2xm1_A* 2j47_A* 2jiw_A* 2wzh_A* 2wzi_A* 2j4g_A* | Back alignment and structure |
|---|
Probab=85.17 E-value=1.6 Score=45.72 Aligned_cols=69 Identities=10% Similarity=-0.007 Sum_probs=49.7
Q ss_pred cHHHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEcccc
Q 014892 44 WWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINH 117 (416)
Q Consensus 44 ~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH 117 (416)
+.+-+.+.||.++..+.|.+++-|- .. .+|++. .|...=|.+ |.+|+++||+.|+++||+||-.+-+-|
T Consensus 142 s~~~ik~~id~ma~~KlN~~h~hl~-Dd-p~~~~~--~wr~~yP~l-t~~ei~elv~yA~~rgI~vvpeI~Pg~ 210 (716)
T 2cho_A 142 SHQARLSQLKFYGKNKMNTYIYGPK-DD-PYHSAP--NWRLPYPDK-EAAQLQELVAVANENEVDFVWAIHPGQ 210 (716)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEECCT-TC-TTTSTT--GGGSCCCHH-HHHHHHHHHHHHHHTTCEEEEEECCTT
T ss_pred CHHHHHHHHHHHHHcCCcEEEEeec-cC-cccccc--cccccCChh-hHHHHHHHHHHHHHcCCEEEEeecccc
Confidence 3788999999999999999999773 11 244430 111111222 789999999999999999999885443
|
| >2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A* | Back alignment and structure |
|---|
Probab=84.31 E-value=7.7 Score=40.37 Aligned_cols=63 Identities=11% Similarity=0.169 Sum_probs=49.1
Q ss_pred cHHHHHhhhhhHHHcCCCEEEe---CCCCCCC--CCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
Q 014892 44 WWRNLERKVPDISKSGFTSVWL---PPATHSF--APEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMA 111 (416)
Q Consensus 44 ~~~gi~~~LdyLk~LGv~~I~L---~Pi~~~~--~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~Vil 111 (416)
+.+....-+|.-+++|+..|.+ --=++.. +..+ .+.||..+.|.+ |+++||+=|+++|++|||
T Consensus 369 nte~~K~YIDFAA~~G~eyvLveGwD~GW~~~~~~~~~-~~fd~~~p~pd~----Dl~eL~~YA~sKGV~iil 436 (738)
T 2d73_A 369 NTANVKRYIDFAAAHGFDAVLVEGWNEGWEDWFGNSKD-YVFDFVTPYPDF----DVKEIHRYAARKGIKMMM 436 (738)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEECSCBTTGGGCSSSCCS-SCCCSSCBCTTC----CHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEeccCCcccccCcccc-ccccccccCCCC----CHHHHHHHHHhCCCEEEE
Confidence 7999999999999999999998 3333221 1122 335777777765 699999999999999999
|
| >1esw_A Amylomaltase; (beta,alpha)8-barrel, glucanotransferase, alpha-amylase FAMI acarbose, transferase; HET: ACR; 1.90A {Thermus aquaticus} SCOP: c.1.8.1 PDB: 1cwy_A* 1fp8_A 1fp9_A 2owc_A* 2oww_A* 2owx_A* 2x1i_A* | Back alignment and structure |
|---|
Probab=83.02 E-value=1 Score=45.06 Aligned_cols=18 Identities=17% Similarity=0.222 Sum_probs=15.5
Q ss_pred HHHHHHCCCEEEEEEccc
Q 014892 99 LHKMKQHKVRAMADIVIN 116 (416)
Q Consensus 99 v~~aH~~Gi~VilD~V~N 116 (416)
-+.|+++||+||-|+-+-
T Consensus 200 ~~yA~~~GI~l~gDlpig 217 (500)
T 1esw_A 200 KAEAEALGIRIIGDMPIF 217 (500)
T ss_dssp HHHHHHTTCEEEEEEESS
T ss_pred HHHHHHCCCEEEEeeece
Confidence 467899999999999875
|
| >3ian_A Chitinase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 1.75A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=82.81 E-value=4.4 Score=37.99 Aligned_cols=65 Identities=17% Similarity=0.306 Sum_probs=45.2
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEEccccCcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCc
Q 014892 86 NSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPN 165 (416)
Q Consensus 86 d~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 165 (416)
+|.--+.+++.+.|+.||++|+||++=+ +. |... + .
T Consensus 59 ~~~~~~~~~~~~~i~~~k~~g~kvllsi-----GG------------------~~~~-----------------~----~ 94 (321)
T 3ian_A 59 KPYNKTDTEFRAEISKLNAEGKSVLIAL-----GG------------------ADAH-----------------I----E 94 (321)
T ss_dssp CCSSSCHHHHHHHHHHHHHTTCEEEEEE-----EE------------------TTCC-----------------C----C
T ss_pred cCCcccchhHHHHHHHHHHCCCEEEEEe-----cc------------------CCCC-----------------c----c
Confidence 3333456789999999999999999865 11 0000 0 0
Q ss_pred CCCCCHHHHHHHHHHHHHHHHhcCCCeEEecc
Q 014892 166 IDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDF 197 (416)
Q Consensus 166 ln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~ 197 (416)
+ +++-|+.+++.+..+++++|+||+-+|-
T Consensus 95 ~---~~~~r~~f~~~~~~~~~~~g~DGiDiD~ 123 (321)
T 3ian_A 95 L---KKSQESDFVNEIIRLVDTYGFDGLDIDL 123 (321)
T ss_dssp C---CGGGHHHHHHHHHHHHHHHCCCEEEEEE
T ss_pred c---ChHHHHHHHHHHHHHHHHhCCCeEEEec
Confidence 1 1223777888888888899999999995
|
| >3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea} | Back alignment and structure |
|---|
Probab=82.81 E-value=2.9 Score=40.50 Aligned_cols=61 Identities=11% Similarity=0.104 Sum_probs=39.4
Q ss_pred cHHHHHhhhhhHHH-----cCCCEEEeCCCCCCCC--CCCcccccCCCCCC-CCCCHHHHHHHHHHHHHCCCEEEE
Q 014892 44 WWRNLERKVPDISK-----SGFTSVWLPPATHSFA--PEGYLPQNLYSLNS-SYGSEHLLKALLHKMKQHKVRAMA 111 (416)
Q Consensus 44 ~~~gi~~~LdyLk~-----LGv~~I~L~Pi~~~~~--~~GY~~~d~~~id~-~~Gt~~d~~~Lv~~aH~~Gi~Vil 111 (416)
+-+.|.+.++.+++ +|+..|.|==-+.... ..| |+ .++| +|- ..++.|++.+|++|||+.+
T Consensus 24 ~e~~i~~~ad~~~~~gl~~~G~~~~~iDdgW~~~~r~~~G----~~-~~~~~kFP--~Gl~~l~~~i~~~Glk~Gi 92 (397)
T 3a5v_A 24 DEQLILDAAKAIASSGLKDLGYNYVIIDDCWQKNERESSK----TL-LADPTKFP--RGIKPLVDDIHNLGLKAGI 92 (397)
T ss_dssp CHHHHHHHHHHHHHHTHHHHTCCEEECCSSCBCSSCCTTS----CC-CBCTTTCT--TCHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHHHHcCCcccCceEEEECCCcCCCCCCCCC----Ce-EEChhcCC--cCHHHHHHHHHHcCCEEEE
Confidence 45667777777766 9999998722221110 112 32 4443 352 2599999999999999877
|
| >3fnd_A Chitinase; TIM-barrel, structural genomics, PSI-2, P structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides thetaiotaomicron} PDB: 3co4_A | Back alignment and structure |
|---|
Probab=82.60 E-value=1.8 Score=40.37 Aligned_cols=79 Identities=10% Similarity=0.134 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHHCCCEEEEEEccccCcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCH
Q 014892 92 EHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQH 171 (416)
Q Consensus 92 ~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~ 171 (416)
.+.+++|++++|..|+||++=+ +. |.... +. . -..++
T Consensus 51 ~~~~~~~~~k~~~~~lkvllsi-----GG------------------~~~~~----------------~~---~-~~~~~ 87 (312)
T 3fnd_A 51 RKRIESVRETAHKHNVKILISL-----AK------------------NSPGE----------------FT---T-AINDP 87 (312)
T ss_dssp TTTHHHHHHHHHHTTCEEEEEE-----EE------------------SSTTH----------------HH---H-HHHSH
T ss_pred HHHHHHHHHHHHcCCCEEEEEE-----cC------------------CCCch----------------hh---H-HhCCH
Confidence 4458899999999999999865 11 10000 00 0 12367
Q ss_pred HHHHHHHHHHHHHHHhcCCCeEEecccCCCc-----HHHHHHHHH-hc
Q 014892 172 FVRKDIIAWLRWLRNTVGFQDFRFDFARGYS-----AKYVKEYIE-GA 213 (416)
Q Consensus 172 ~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~-----~~~~~~~~~-~~ 213 (416)
+.|+.+++.+..+++++|+||+-+|--.... ..|++++++ ++
T Consensus 88 ~~r~~fi~si~~~~~~~~~DGiDiDwE~~p~~~~~~~~ll~eLr~~~l 135 (312)
T 3fnd_A 88 KARKELIQQIIAFTKEYKLDGFDIDYEEYDNWDKNFPSLLVFARGLYL 135 (312)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEECCCCCTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCeEEEeeeeCCCchHHHHHHHHHHHHHHh
Confidence 8899999999888899999999999541111 347888888 77
|
| >1x1n_A 4-alpha-glucanotransferase; disproportionating enzyme, amylomaltase, D-enzyme; 1.80A {Solanum tuberosum} SCOP: c.1.8.1 | Back alignment and structure |
|---|
Probab=81.99 E-value=1.4 Score=44.40 Aligned_cols=36 Identities=22% Similarity=0.374 Sum_probs=25.5
Q ss_pred cCCCeEEecccCCC----------------------cHHHHHHHHHhcCCceEEEccc
Q 014892 188 VGFQDFRFDFARGY----------------------SAKYVKEYIEGARPIFSVGEYW 223 (416)
Q Consensus 188 ~gvDGfRlD~a~~~----------------------~~~~~~~~~~~~~~~~~vgE~~ 223 (416)
..+|++|+|.+..+ ..++++.+.+......+|||-.
T Consensus 313 ~~~d~lRIDH~~Gf~r~W~IP~g~~ta~~G~~v~~pg~~l~~~l~~~~~~~~vIaEDL 370 (524)
T 1x1n_A 313 DLFDEFRIDHFRGFAGFWAVPSEEKIAILGRWKVGPGKPLFDAILQAVGKINIIAEDL 370 (524)
T ss_dssp HHCSEEEEETGGGGTEEEEEETTCSSSSSCEEEECCCHHHHHHHHHHHCCCEEEECCC
T ss_pred HHCCEEEecchHhhHHheeccCCCCCCCCCEeeeCCHHHHHHHHHHHcCCCccHHHhh
Confidence 45789999986443 2567777766665677899955
|
| >1tz7_A 4-alpha-glucanotransferase; (beta, alpha)8- barrel; 2.15A {Aquifex aeolicus} SCOP: c.1.8.1 | Back alignment and structure |
|---|
Probab=81.97 E-value=1.2 Score=44.46 Aligned_cols=18 Identities=6% Similarity=0.196 Sum_probs=15.4
Q ss_pred HHHHHHCCCEEEEEEccc
Q 014892 99 LHKMKQHKVRAMADIVIN 116 (416)
Q Consensus 99 v~~aH~~Gi~VilD~V~N 116 (416)
-+.|+++||+||-|+-+-
T Consensus 213 ~~yA~~~GI~ligDlpIg 230 (505)
T 1tz7_A 213 RRYARERGISIVGDLPMY 230 (505)
T ss_dssp HHHHHHTTCEEEEEECSS
T ss_pred HHHHHHCCCEEEEeeece
Confidence 456899999999999875
|
| >3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A* | Back alignment and structure |
|---|
Probab=80.63 E-value=0.8 Score=47.10 Aligned_cols=55 Identities=9% Similarity=0.187 Sum_probs=39.1
Q ss_pred HHhhhhhHHHcCCCEEEeCCCCCC---CCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Q 014892 48 LERKVPDISKSGFTSVWLPPATHS---FAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADI 113 (416)
Q Consensus 48 i~~~LdyLk~LGv~~I~L~Pi~~~---~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~ 113 (416)
..+.|..+|++|+|+|.+ +++=+ +...-| .|....||.++++.|+++||.|||..
T Consensus 42 W~d~l~kmKa~G~NtV~~-yv~W~~hEP~~G~f----------dF~g~~DL~~fl~~a~~~GL~ViLr~ 99 (654)
T 3thd_A 42 WKDRLLKMKMAGLNAIQT-YVPWNFHEPWPGQY----------QFSEDHDVEYFLRLAHELGLLVILRP 99 (654)
T ss_dssp HHHHHHHHHHTTCSEEEE-ECCHHHHCSBTTBC----------CCSGGGCHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHcCCCEEEE-EechhhcCCCCCcc----------CccchHHHHHHHHHHHHcCCEEEecc
Confidence 456777899999999999 54311 111112 23335689999999999999999963
|
| >3top_A Maltase-glucoamylase, intestinal; membrane, hydrolase-hydrolase inhibitor complex; HET: ACR; 2.88A {Homo sapiens} PDB: 3ton_A* | Back alignment and structure |
|---|
Probab=80.40 E-value=0.83 Score=49.01 Aligned_cols=35 Identities=17% Similarity=0.066 Sum_probs=29.3
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHh-------cCCCeEEecccC
Q 014892 165 NIDHTQHFVRKDIIAWLRWLRNT-------VGFQDFRFDFAR 199 (416)
Q Consensus 165 dln~~~~~v~~~l~~~~~~w~~~-------~gvDGfRlD~a~ 199 (416)
-+|+.||++|+.-.+.++.+.++ .||||+=+|+..
T Consensus 431 fpDftnp~ar~WW~~~~~~~~~~~~~~~~~~gvdg~W~DmnE 472 (908)
T 3top_A 431 FPDFFRNSTAKWWKREIEELYNNPQNPERSLKFDGMWIDMNE 472 (908)
T ss_dssp CBCTTSHHHHHHHHHHHHHHHSCSSCGGGCCCCSEEEECSTT
T ss_pred cccCCCHHHHHHHHHHHHHHHhccccccccCCccEEEEecCC
Confidence 36789999999998888888753 899999999853
|
| >3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=80.40 E-value=1.3 Score=45.47 Aligned_cols=59 Identities=8% Similarity=0.083 Sum_probs=42.6
Q ss_pred HHHHHhhhhhHHHcCCCEEEeCCCCCC--CCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Q 014892 45 WRNLERKVPDISKSGFTSVWLPPATHS--FAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADI 113 (416)
Q Consensus 45 ~~gi~~~LdyLk~LGv~~I~L~Pi~~~--~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~ 113 (416)
-+-..+.|..+|++|+|+|-+.=.+.. +....| .|...+++.++++.|+++||+||+..
T Consensus 36 ~e~w~~dl~~mK~~G~N~Vrt~v~W~~hEP~~G~y----------df~gl~~l~~fl~la~e~GL~VIl~~ 96 (612)
T 3d3a_A 36 KEYWEHRIKMCKALGMNTICLYVFWNFHEPEEGRY----------DFAGQKDIAAFCRLAQENGMYVIVRP 96 (612)
T ss_dssp GGGHHHHHHHHHHHTCCEEEEECCHHHHCSSTTCC----------CCSGGGCHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCEEEEcChHHhcCCCCCcc----------ChhHHHHHHHHHHHHHHCCCEEEEec
Confidence 345678899999999999998522211 111222 24456789999999999999999875
|
| >3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406} | Back alignment and structure |
|---|
Probab=80.14 E-value=3.1 Score=33.05 Aligned_cols=41 Identities=15% Similarity=0.146 Sum_probs=33.0
Q ss_pred HHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEE
Q 014892 46 RNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAM 110 (416)
Q Consensus 46 ~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~Vi 110 (416)
+.+.+-++.+.++|+.+||+.|=+. + +++++.|+++||+|+
T Consensus 69 ~~v~~~v~e~~~~g~k~v~~~~G~~----------------------~--~e~~~~a~~~Girvv 109 (122)
T 3ff4_A 69 QNQLSEYNYILSLKPKRVIFNPGTE----------------------N--EELEEILSENGIEPV 109 (122)
T ss_dssp HHHGGGHHHHHHHCCSEEEECTTCC----------------------C--HHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHhcCCCEEEECCCCC----------------------h--HHHHHHHHHcCCeEE
Confidence 5567778899999999999987221 1 588899999999988
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 416 | ||||
| d1ht6a2 | 347 | c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hor | 2e-57 | |
| d1gcya2 | 357 | c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan m | 2e-51 | |
| d1mxga2 | 361 | c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeo | 1e-40 | |
| d2d3na2 | 394 | c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillu | 5e-32 | |
| d1hvxa2 | 393 | c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillu | 5e-28 | |
| d1e43a2 | 393 | c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera | 2e-25 | |
| d1hx0a2 | 403 | c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus s | 2e-25 | |
| d1jaea2 | 378 | c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mea | 5e-25 | |
| d1ud2a2 | 390 | c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillu | 1e-23 | |
| d1g94a2 | 354 | c.1.8.1 (A:1-354) Bacterial alpha-amylase {Pseudoa | 9e-23 | |
| d1ht6a1 | 57 | b.71.1.1 (A:348-404) Plant alpha-amylase {Barley ( | 3e-21 | |
| d1avaa1 | 57 | b.71.1.1 (A:347-403) Plant alpha-amylase {Barley ( | 3e-19 | |
| d1ua7a2 | 344 | c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillu | 8e-15 | |
| d2aaaa2 | 381 | c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergill | 8e-14 | |
| d1j0ha3 | 382 | c.1.8.1 (A:124-505) Neopullulanase, central domain | 1e-13 | |
| d2guya2 | 381 | c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergill | 2e-13 | |
| d1wzaa2 | 409 | c.1.8.1 (A:28-436) Bacterial alpha-amylase {Haloth | 3e-13 | |
| d3bmva4 | 406 | c.1.8.1 (A:1-406) Cyclodextrin glycosyltransferase | 1e-12 | |
| d1wzla3 | 382 | c.1.8.1 (A:121-502) Maltogenic amylase, central do | 7e-12 | |
| d1h3ga3 | 422 | c.1.8.1 (A:96-517) Cyclomaltodextrinase, central d | 1e-11 | |
| d1ji1a3 | 432 | c.1.8.1 (A:123-554) Maltogenic amylase, central do | 2e-11 | |
| d1qhoa4 | 407 | c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase | 3e-11 | |
| d1g5aa2 | 554 | c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysacc | 2e-10 | |
| d1ea9c3 | 382 | c.1.8.1 (C:122-503) Maltogenic amylase, central do | 6e-10 | |
| d1lwha2 | 391 | c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Ther | 7e-10 | |
| d1iv8a2 | 653 | c.1.8.1 (A:1-653) Maltooligosyl trehalose synthase | 3e-09 | |
| d1m53a2 | 478 | c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Kle | 3e-09 | |
| d1m7xa3 | 396 | c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enz | 4e-09 | |
| d1eh9a3 | 400 | c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrol | 1e-08 | |
| d1uoka2 | 479 | c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus | 2e-08 | |
| d1bf2a3 | 475 | c.1.8.1 (A:163-637) Isoamylase, central domain {Ps | 7e-08 | |
| d2bhua3 | 420 | c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydro | 2e-07 | |
| d1r7aa2 | 434 | c.1.8.1 (A:1-434) Sucrose phosphorylase {Bifidobac | 6e-05 | |
| d1gjwa2 | 572 | c.1.8.1 (A:1-572) Maltosyltransferase {Thermotoga | 0.002 |
| >d1ht6a2 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Plant alpha-amylase species: Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]
Score = 190 bits (482), Expect = 2e-57
Identities = 160/347 (46%), Positives = 217/347 (62%), Gaps = 17/347 (4%)
Query: 29 EILFQGFNWESCKHD--WWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLN 86
++LFQGFNWES K W+ + KV DI+ +G T VWLPP +HS + EGY+P LY ++
Sbjct: 2 QVLFQGFNWESWKQSGGWYNMMMGKVDDIAAAGVTHVWLPPPSHSVSNEGYMPGRLYDID 61
Query: 87 SS-YGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHAVT 145
+S YG+ LK+L+ + V+A+ADIVINHR + G Y ++G
Sbjct: 62 ASKYGNAAELKSLIGALHGKGVQAIADIVINHRCADYKDSRGIYCIFEGGTSDGRLDWGP 121
Query: 146 SCTGGLGNG--------STGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDF 197
TG +F P+IDH V++++ WL WL++ +GF +R DF
Sbjct: 122 HMICRDDTKYSDGTANLDTGADFAAAPDIDHLNDRVQRELKEWLLWLKSDLGFDAWRLDF 181
Query: 198 ARGYSAKYVKEYIEGARPIFSVGEYWDSCNYNSHGL-DYNQDSHRQRIINWIDGTG---Q 253
ARGYS + K YI+G P +V E WD+ G +Y+QD+HRQ ++NW+D G
Sbjct: 182 ARGYSPEMAKVYIDGTSPSLAVAEVWDNMATGGDGKPNYDQDAHRQNLVNWVDKVGGAAS 241
Query: 254 LSAAFDFTTKGILQEAVKGQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPF 313
FDFTTKGIL AV+G+ WRL D QGK PGVMGWWP++AVTF+DNHDTGSTQA WPF
Sbjct: 242 AGMVFDFTTKGILNAAVEGELWRLIDPQGKAPGVMGWWPAKAVTFVDNHDTGSTQAMWPF 301
Query: 314 PSNHIMEGYAYILMHPGIPSVFYDHFYDWGDSIHNQIVKLMDVRRQQ 360
PS+ +M+GYAYIL HPGIP +FYDHF++WG +QI L+ +R++
Sbjct: 302 PSDKVMQGYAYILTHPGIPCIFYDHFFNWGF--KDQIAALVAIRKRN 346
|
| >d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) species: Pseudomonas stutzeri [TaxId: 316]
Score = 174 bits (442), Expect = 2e-51
Identities = 100/374 (26%), Positives = 153/374 (40%), Gaps = 37/374 (9%)
Query: 9 DETNQQTDLVKIRAVIRNGREILFQGFNWESCK---HDWWRNLERKVPDISKSGFTSVWL 65
D+ + + V+ G EI+ QGF+W + +DW+ L ++ I+ GF+++W+
Sbjct: 1 DQAGKSPNAVRYH----GGDEIILQGFHWNVVREAPNDWYNILRQQAATIAADGFSAIWM 56
Query: 66 PPA----------THSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVI 115
P + S EGY + ++ N YGS+ L+ + V+ + D+V
Sbjct: 57 PVPWRDFSSWSDGSKSGGGEGYFWHD-FNKNGRYGSDAQLRQAASALGGAGVKVLYDVVP 115
Query: 116 NHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRK 175
NH +G+ K W G +++ V
Sbjct: 116 NH---MNRGYPDKEINLPAGQGFWRNDCADPGNYPNDCDDGDRFIGGDADLNTGHPQVYG 172
Query: 176 DIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGARP-IFSVGEYWDSCNYNSHGLD 234
LR+ G FRFDF RGY+ + V ++ + F VGE W + +
Sbjct: 173 MFRDEFTNLRSQYGAGGFRFDFVRGYAPERVNSWMTDSADNSFCVGELWKGPSEYPNWDW 232
Query: 235 YNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKGQFWRLRDAQGKPPGVMGWWPSR 294
N S +Q I +W D FDF K +Q + + P W
Sbjct: 233 RNTASWQQIIKDWSDR--AKCPVFDFALKERMQNGSIADWKHGLNGNPDP-----RWREV 285
Query: 295 AVTFLDNHDTGST------QAHWPFPSNHIMEGYAYILMHPGIPSVFYDHFYDWGDSIHN 348
AVTF+DNHDTG + Q HW I + YAYIL PG P V++DH YDWG +
Sbjct: 286 AVTFVDNHDTGYSPGQNGGQHHWALQDGLIRQAYAYILTSPGTPVVYWDHMYDWGY--GD 343
Query: 349 QIVKLMDVRRQQDI 362
I +L+ VRR +
Sbjct: 344 FIRQLIQVRRAAGV 357
|
| >d1mxga2 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeon Pyrococcus woesei [TaxId: 2262]} Length = 361 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Archaeon Pyrococcus woesei [TaxId: 2262]
Score = 146 bits (368), Expect = 1e-40
Identities = 76/374 (20%), Positives = 144/374 (38%), Gaps = 52/374 (13%)
Query: 30 ILFQGFNWESCK-HDWWRNLERKVPDISKSGFTSVWLPPATHSFAPE---GYLPQNLYSL 85
++ Q F W+ WW ++ K+P+ ++G +++WLPP + + GY P + + L
Sbjct: 11 VIMQAFYWDVPGGGIWWDHIRSKIPEWYEAGISAIWLPPPSKGMSGGYSMGYDPYDYFDL 70
Query: 86 ---------NSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTT---QGHGGKYNRYD 133
+ +GS+ L L+ + ++ +AD+VINHR G G Y D
Sbjct: 71 GEYYQKGTVETRFGSKEELVRLIQTAHAYGIKVIADVVINHRAGGDLEWNPFVGDYTWTD 130
Query: 134 GIPLSWDEHA--VTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTV--- 188
++ ++ + F G P+I H + + + + +
Sbjct: 131 FSKVASGKYTANYLDFHPNELHCCDEGTFGGFPDICHHKEWDQYWLWKSNESYAAYLRSI 190
Query: 189 GFQDFRFDFARGYSAKYVKEYIEGARPIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWI 248
GF +RFD+ +GY A V++++ + + + +
Sbjct: 191 GFDGWRFDYVKGYGAWVVRDWLNWWGGWAVGEYWDTNVDALLSWAYESGAKV-------- 242
Query: 249 DGTGQLSAAFDFTTKGILQEAVK-GQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGST 307
FDF + EA L A V+ P +AVTF+ NHDT
Sbjct: 243 ---------FDFPLYYKMDEAFDNNNIPALVYALQNGQTVVSRDPFKAVTFVANHDTDII 293
Query: 308 QAHWPFPSNHIMEGYAYILMHPGIPSVFYDHFYDWGDSIHNQIVKLMDVRRQQDIHSRSS 367
+P YA+IL + G P +FY F +W + ++++ L+ + + S
Sbjct: 294 WNKYP--------AYAFILTYEGQPVIFYRDFEEWLN--KDKLINLIWIHDH---LAGGS 340
Query: 368 IKILEAQSNLYSAI 381
I+ ++ +
Sbjct: 341 TTIVYYDNDELIFV 354
|
| >d2d3na2 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 1416]} Length = 394 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus sp. 707 [TaxId: 1416]
Score = 123 bits (308), Expect = 5e-32
Identities = 79/399 (19%), Positives = 137/399 (34%), Gaps = 80/399 (20%)
Query: 30 ILFQGFNWESCK-HDWWRNLERKVPDISKSGFTSVWLPPATHSFAPE--GYLPQNLYSL- 85
+ Q F W + W L ++ G T+VW+PPA + GY +LY L
Sbjct: 4 TMMQYFEWYLPNDGNHWNRLNSDASNLKSKGITAVWIPPAWKGASQNDVGYGAYDLYDLG 63
Query: 86 --------NSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVG----------------- 120
+ YG+ L+A + +K + ++ D+V+NH+ G
Sbjct: 64 EFNQKGTVRTKYGTRSQLQAAVTSLKNNGIQVYGDVVMNHKGGADATEMVRAVEVNPNNR 123
Query: 121 ----------------TTQGHGGKYNRYDGIPLSWD---------EHAVTSCTGGLGNGS 155
G G ++ + +D + G G
Sbjct: 124 NQEVTGEYTIEAWTRFDFPGRGNTHSSFKWRWYHFDGVDWDQSRRLNNRIYKFRGHGKAW 183
Query: 156 TGDN--------FHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVK 207
+ + +ID V ++ W W NT+G FR D + + +
Sbjct: 184 DWEVDTENGNYDYLMYADIDMDHPEVVNELRNWGVWYTNTLGLDGFRIDAVKHIKYSFTR 243
Query: 208 EYIEGARPIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQ 267
++I + N + + I N++ T + FD L
Sbjct: 244 DWIN---------HVRSATGKNMFAVAEFWKNDLGAIENYLQKTNWNHSVFDVPLHYNLY 294
Query: 268 EAVK-GQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFPS-NHIMEGYAYI 325
A K G + +R+ + PS AVTF+DNHD+ +A F YA
Sbjct: 295 NASKSGGNYDMRNIFNGTV--VQRHPSHAVTFVDNHDSQPEEALESFVEEWFKPLAYALT 352
Query: 326 LMH-PGIPSVFYDHFYDWGD----SIHNQIVKLMDVRRQ 359
L G PSVFY +Y ++ ++I +++ R++
Sbjct: 353 LTREQGYPSVFYGDYYGIPTHGVPAMRSKIDPILEARQK 391
|
| >d1hvxa2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillus stearothermophilus [TaxId: 1422]} Length = 393 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus stearothermophilus [TaxId: 1422]
Score = 112 bits (279), Expect = 5e-28
Identities = 82/407 (20%), Positives = 138/407 (33%), Gaps = 91/407 (22%)
Query: 26 NGREILFQGFNWESCK-HDWWRNLERKVPDISKSGFTSVWLPPATHS--FAPEGYLPQNL 82
+ Q F W W + + ++S G T++WLPPA + GY +L
Sbjct: 3 PFNGTMMQYFEWYLPDDGTLWTKVANEANNLSSLGITALWLPPAYKGTSRSDVGYGVYDL 62
Query: 83 YSL---------NSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQ---------- 123
Y L + YG++ + ++ AD+V +H+ G
Sbjct: 63 YDLGEFNQKGAVRTKYGTKAQYLQAIQAAHAAGMQVYADVVFDHKGGADGTEWVDAVEVN 122
Query: 124 -----------------------GHGGKYNRYDGIPLSWD----------------EHAV 144
G G Y+ + +D
Sbjct: 123 PSDRNQEISGTYQIQAWTKFDFPGRGNTYSSFKWRWYHFDGVDWDESRKLSRIYKFRGIG 182
Query: 145 TSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAK 204
+ + + ++ ++D V ++ +W +W NT FR D +
Sbjct: 183 KAWDWEVDTENGNYDYLMYADLDMDHPEVVTELKSWGKWYVNTTNIDGFRLDAVKHIKFS 242
Query: 205 YVKEYIE-----GARPIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFD 259
+ +++ +P+F+VGEYW ++ N+I T + FD
Sbjct: 243 FFPDWLSYVRSQTGKPLFTVGEYWSY--------------DINKLHNYIMKTNGTMSLFD 288
Query: 260 FTTKGILQEAVK-GQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDT--GSTQAHWPFPSN 316
A K G + +R +M P+ AVTF+DNHDT G W P
Sbjct: 289 APLHNKFYTASKSGGTFDMRTLMTN--TLMKDQPTLAVTFVDNHDTEPGQALQSWVDPWF 346
Query: 317 HIMEGYAYILM-HPGIPSVFYDHFYDWGD----SIHNQIVKLMDVRR 358
+ YA+IL G P VFY +Y S+ ++I L+ RR
Sbjct: 347 KPL-AYAFILTRQEGYPCVFYGDYYGIPQYNIPSLKSKIDPLLIARR 392
|
| >d1e43a2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]} Length = 393 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]
Score = 104 bits (260), Expect = 2e-25
Identities = 74/401 (18%), Positives = 140/401 (34%), Gaps = 82/401 (20%)
Query: 30 ILFQGFNWESCK-HDWWRNLERKVPDISKSGFTSVWLPPATHSF--APEGYLPQNLYSL- 85
L Q F W + W+ L+ +S G T+VW+PPA + GY P +LY L
Sbjct: 4 TLMQYFEWYTPNDGQHWKRLQNDAEHLSDIGITAVWIPPAYKGLSQSDNGYGPYDLYDLG 63
Query: 86 --------NSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQ-------------- 123
+ YG++ L+ + + V+ D+V+NH+ G
Sbjct: 64 EFQQKGTVRTKYGTKSELQDAIGSLHSRNVQVYGDVVLNHKAGADATEDVTAVEVNPANR 123
Query: 124 -------------------GHGGKYNRYDGIPLSWD----------------EHAVTSCT 148
G G Y+ + +D +
Sbjct: 124 NQETSEEYQIKAWTDFRFPGRGNTYSDFKWHWYHFDGADWDESRKISRIFKFRGEGKAWD 183
Query: 149 GGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKE 208
+ + + ++ ++D+ V + W W N + FR D A+ ++++
Sbjct: 184 WEVSSENGNYDYLMYADVDYDHPDVVAETKKWGIWYANELSLDGFRIDAAKHIKFSFLRD 243
Query: 209 YIEGARPIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQE 268
+++ + + ++ ++ N+++ T + FD LQ
Sbjct: 244 WVQ---------AVRQATGKEMFTVAEYWQNNAGKLENYLNKTSFNQSVFDVPLHFNLQA 294
Query: 269 AV-KGQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFPSNHIME-GYAYIL 326
A +G + +R + P ++VTF+DNHDT Q+ YA+IL
Sbjct: 295 ASSQGGGYDMRKLLNGTV--VSKHPLKSVTFVDNHDTQPGQSLESTVQTWFKPLAYAFIL 352
Query: 327 MH-PGIPSVFYDHFYDWG-------DSIHNQIVKLMDVRRQ 359
G P VFY Y ++ ++I ++ R+Q
Sbjct: 353 TRESGYPQVFYGDMYGTKGDSQREIPALKHKIEPILKARKQ 393
|
| >d1hx0a2 c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 9823]} Length = 403 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Animal alpha-amylase species: Pig (Sus scrofa) [TaxId: 9823]
Score = 104 bits (260), Expect = 2e-25
Identities = 61/357 (17%), Positives = 111/357 (31%), Gaps = 48/357 (13%)
Query: 26 NGREILFQGFNWESCKHDWWRNLERKVPDISKSGFTSVWLPPATHSFAP--------EGY 77
+GR + F W W + GF V + P + E Y
Sbjct: 8 SGRTSIVHLFEWR-----WVDIALECERYLGPKGFGGVQVSPPNENIVVTNPSRPWWERY 62
Query: 78 LPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGG---------- 127
P + Y L + G+E+ + ++ + VR D VINH G+ G
Sbjct: 63 QPVS-YKLCTRSGNENEFRDMVTRCNNVGVRIYVDAVINHMCGSGAAAGTGTTCGSYCNP 121
Query: 128 KYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDN--------FHGVPNIDHTQHFVRKDIIA 179
+ +P S + C G + ++ G+ ++ + +VR I
Sbjct: 122 GNREFPAVPYSAWDFNDGKCKTASGGIESYNDPYQVRDCQLVGLLDLALEKDYVRSMIAD 181
Query: 180 WLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGARPIFSVGEYWDSCNYNSHGLDYNQDS 239
+L L + G FR D ++ +K ++ + + S + +
Sbjct: 182 YLNKLIDI-GVAGFRIDASKHMWPGDIKAVLDKLHNLNTNWFPAGSRPFIFQEVIDLGGE 240
Query: 240 HRQRIINWIDGTGQLSAAFDFTTKGILQEAVKGQ-FWRLRDAQGKPPGVMGWWPSRAVTF 298
+ +F L V+ ++ + G RA+ F
Sbjct: 241 AIKS-----SEYFGNGRVTEFKYGAKLGTVVRKWSGEKMSYLKNWGEGWGFMPSDRALVF 295
Query: 299 LDNHDT------GSTQAHWPFPSNHIMEGYAYILMHP-GIPSVFYDHFYDWGDSIHN 348
+DNHD G + + + ++L HP G V Y W + N
Sbjct: 296 VDNHDNQRGHGAGGSSILTFWDARLYKIAVGFMLAHPYGFTRVMSS--YRWARNFVN 350
|
| >d1jaea2 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]} Length = 378 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Animal alpha-amylase species: Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]
Score = 103 bits (257), Expect = 5e-25
Identities = 58/336 (17%), Positives = 99/336 (29%), Gaps = 32/336 (9%)
Query: 25 RNGREILFQGFNWESCKHDWWRNLERKVPD-ISKSGFTSVWLPPATHSFAPEG------Y 77
+GR + F W+ W ++ + + GF V + P +G Y
Sbjct: 7 ASGRNSIVHLFEWK------WNDIADECERFLQPQGFGGVQISPPNEYLVADGRPWWERY 60
Query: 78 LPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQ------GHGGKYNR 131
P + Y +N+ G E + + VR D VINH G
Sbjct: 61 QPVS-YIINTRSGDESAFTDMTRRCNDAGVRIYVDAVINHMTGMNGVGTSGSSADHDGMN 119
Query: 132 YDGIPLSWDEHAVTSCTGGLGNG--STGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVG 189
Y +P + + G+ +++ +VR +I ++ + + G
Sbjct: 120 YPAVPYGSGDFHSPCEVNNYQDADNVRNCELVGLRDLNQGSDYVRGVLIDYMNHMIDL-G 178
Query: 190 FQDFRFDFARGYSAKYVKEYIEGARPIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWID 249
FR D A+ S + G + + + + D + D + I
Sbjct: 179 VAGFRVDAAKHMSPGDLSVIFSGLKNLNTDYGFADGARPFIYQ--EVIDLGGEAISKNEY 236
Query: 250 GTGQLSAAFDFTTKGILQEAVKGQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQA 309
F F Q L + P AV F+DNHD T
Sbjct: 237 TGFGCVLEFQFGVSLGNAFQGGNQLKNLANWG---PEWGLLEGLDAVVFVDNHDNQRTGG 293
Query: 310 HWPF---PSNHIMEGYAYILMHP-GIPSVFYDHFYD 341
A++L HP G + +
Sbjct: 294 SQILTYKNPKPYKMAIAFMLAHPYGTTRIMSSFDFT 329
|
| >d1ud2a2 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillus sp., ksm-k38 [TaxId: 1409]} Length = 390 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus sp., ksm-k38 [TaxId: 1409]
Score = 99.4 bits (246), Expect = 1e-23
Identities = 72/394 (18%), Positives = 133/394 (33%), Gaps = 75/394 (19%)
Query: 30 ILFQGFNWESCK-HDWWRNLERKVPDISKSGFTSVWLPPAT--HSFAPEGYLPQNLYSL- 85
+ Q + W W L +S +G T++W+PPA +S A GY +LY L
Sbjct: 6 TMMQYYEWHLENDGQHWNRLHDDAAALSDAGITAIWIPPAYKGNSQADVGYGAYDLYDLG 65
Query: 86 --------NSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVG------TTQGHGGKYNR 131
+ YG++ L+ + +K + + D+V+NH++G NR
Sbjct: 66 EFNQKGTVRTKYGTKAQLERAIGSLKSNDINVYGDVVMNHKMGADFTEAVQAVQVNPTNR 125
Query: 132 YDGIPLSWDEHAVTSCTGGLGNGSTGDN-------------------------------- 159
+ I ++ A T N + D
Sbjct: 126 WQDISGAYTIDAWTGFDFSGRNNAYSDFKWRWFHFNGVDWDQRYQENHIFRFANTNWNWR 185
Query: 160 ---------FHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYI 210
+ NID + V+ ++ W W + + +R D + Y +++
Sbjct: 186 VDEENGNYDYLLGSNIDFSHPEVQDELKDWGSWFTDELDLDGYRLDAIKHIPFWYTSDWV 245
Query: 211 EGARPIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAV 270
+ + + + + ++D + FD A
Sbjct: 246 R---------HQRNEADQDLFVVGEYWKDDVGALEFYLDEMNWEMSLFDVPLNYNFYRAS 296
Query: 271 KGQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFPSN-HIMEGYAYILMH- 328
+ ++ P AVTF+DNHDT ++ + ++ YA IL
Sbjct: 297 QQGGSY-DMRNILRGSLVEAHPMHAVTFVDNHDTQPGESLESWVADWFKPLAYATILTRE 355
Query: 329 PGIPSVFYDHFY----DWGDSIHNQIVKLMDVRR 358
G P+VFY +Y D + + I +L+D R+
Sbjct: 356 GGYPNVFYGDYYGIPNDNISAKKDMIDELLDARQ 389
|
| >d1g94a2 c.1.8.1 (A:1-354) Bacterial alpha-amylase {Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]} Length = 354 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]
Score = 96.5 bits (239), Expect = 9e-23
Identities = 55/331 (16%), Positives = 100/331 (30%), Gaps = 45/331 (13%)
Query: 33 QGFNWESCKHDWWRNLERKVPD-ISKSGFTSVWLPPATHSFAP----EGYLPQNLYSLNS 87
F W W+++ ++ + G+ +V + P Y P + Y L S
Sbjct: 7 HLFEWN------WQDVAQECEQYLGPKGYAAVQVSPPNEHITGSQWWTRYQPVS-YELQS 59
Query: 88 SYGSEHLLKALLHKMKQHKVRAMADIVINH---RVGTTQGHGGKYNRYDGIPLSWDEHAV 144
G+ ++++ V D +INH GT N+ I D H
Sbjct: 60 RGGNRAQFIDMVNRCSAAGVDIYVDTLINHMAAGSGTGTAGNSFGNKSFPIYSPQDFHES 119
Query: 145 TSCTGG----LGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARG 200
+ G+ ++D ++V+ I A++ L+ + FRFD ++
Sbjct: 120 CTINNSDYGNDRYRVQNCELVGLADLDTASNYVQNTIAAYINDLQAIG-VKGFRFDASKH 178
Query: 201 YSAKYVKEYIEGARP-IFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFD 259
+A ++ + E D +Y +
Sbjct: 179 VAASDIQSLMAKVNGSPVVFQEVIDQGGEAVGASEYL----------------STGLVTE 222
Query: 260 FTTKGILQEAVKGQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDT-----GSTQAHWPFP 314
F L + G+ G S AV F+DNHD G+
Sbjct: 223 FKYSTELGNTFRNGSLAWLSNFGE--GWGFMPSSSAVVFVDNHDNQRGHGGAGNVITFED 280
Query: 315 SNHIMEGYAYILMHP-GIPSVFYDHFYDWGD 344
++L +P G P V + +
Sbjct: 281 GRLYDLANVFMLAYPYGYPKVMSSYDFHGDT 311
|
| >d1ht6a1 b.71.1.1 (A:348-404) Plant alpha-amylase {Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]} Length = 57 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Glycosyl hydrolase domain superfamily: Glycosyl hydrolase domain family: alpha-Amylases, C-terminal beta-sheet domain domain: Plant alpha-amylase species: Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]
Score = 84.4 bits (209), Expect = 3e-21
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 362 IHSRSSIKILEAQSNLYSAIIGDKVCMKIGDGSWCP--AGKEWTLATSGHKYAVWHK 416
I + S++KIL + + Y A I KV +KIG + + G+ YAVW K
Sbjct: 1 ITATSALKILMHEGDAYVAEIDGKVVVKIGSRYDVGAVIPAGFVTSAHGNDYAVWEK 57
|
| >d1avaa1 b.71.1.1 (A:347-403) Plant alpha-amylase {Barley (Hordeum vulgare), seeds, AMY2 isozyme [TaxId: 4513]} Length = 57 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Glycosyl hydrolase domain superfamily: Glycosyl hydrolase domain family: alpha-Amylases, C-terminal beta-sheet domain domain: Plant alpha-amylase species: Barley (Hordeum vulgare), seeds, AMY2 isozyme [TaxId: 4513]
Score = 78.6 bits (194), Expect = 3e-19
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 363 HSRSSIKILEAQSNLYSAIIGDKVCMKIGDGSWCP--AGKEWTLATSGHKYAVWHK 416
H+ S ++I+EA ++LY A I KV +K+G + +A G+ YAVW K
Sbjct: 1 HNESKLQIIEADADLYLAEIDGKVIVKLGPRYDVGNLIPGGFKVAAHGNDYAVWEK 56
|
| >d1ua7a2 c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillus subtilis [TaxId: 1423]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus subtilis [TaxId: 1423]
Score = 73.0 bits (178), Expect = 8e-15
Identities = 55/325 (16%), Positives = 100/325 (30%), Gaps = 53/325 (16%)
Query: 33 QGFNWESCKHDWWRNLERKVPDISKSGFTSVWLPPATHS-----------FAPEGYLPQN 81
+NW + L+ + DI +G+T++ P Y P +
Sbjct: 10 HAWNWS------FNTLKHNMKDIHDAGYTAIQTSPINQVKEGNQGDKSMSNWYWLYQPTS 63
Query: 82 LYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDE 141
N G+E K + +++ ++ + D VINH TT + N IP
Sbjct: 64 YQIGNRYLGTEQEFKEMCAAAEEYGIKVIVDAVINH---TTFDYAAISNEVKSIPNWTHG 120
Query: 142 HAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGY 201
+ + T ++ G+ + + V+ + +L N G FRFD A+
Sbjct: 121 NTQIKNWSDRWDV-TQNSLLGLYDWNTQNTQVQSYLKRFLERALND-GADGFRFDAAKHI 178
Query: 202 SAKYVKEY-------IEGARPIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQL 254
Y I F GE R + +
Sbjct: 179 ELPDDGSYGSQFWPNITNTSAEFQYGEILQDSA--------------SRDAAYANYMDVT 224
Query: 255 SAAFDFTTKGILQEAVKGQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDT--GSTQAHWP 312
++ + + + L+ G A + VT++++HDT +
Sbjct: 225 ASNYGHSIRSALKNRNLGVSNISHYAS-------DVSADKLVTWVESHDTYANDDEESTW 277
Query: 313 FPSNHIMEGYAYILMHP-GIPSVFY 336
+ I G+A I P F
Sbjct: 278 MSDDDIRLGWAVIASRSGSTPLFFS 302
|
| >d2aaaa2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus niger, acid amylase [TaxId: 5061]} Length = 381 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Fungal alpha-amylases species: Aspergillus niger, acid amylase [TaxId: 5061]
Score = 70.1 bits (170), Expect = 8e-14
Identities = 59/347 (17%), Positives = 113/347 (32%), Gaps = 49/347 (14%)
Query: 45 WRNLERKVPDISKSGFTSVWLPPATHSF--------APEGYLPQNLYSLNSSYGSEHLLK 96
W+ + + I GFT++W+ P T A GY Q +Y +NS++G+ LK
Sbjct: 42 WQGIIDHLDYIEGMGFTAIWISPITEQLPQDTADGEAYHGYWQQKIYDVNSNFGTADNLK 101
Query: 97 ALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTG-----GL 151
+L + + M D+V +H G+ Y+ +D S H T +
Sbjct: 102 SLSDALHARGMYLMVDVVPDHMGYAGNGNDVDYSVFDPFDSSSYFHPYCLITDWDNLTMV 161
Query: 152 GNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIE 211
+ GD +P++D T+ VR W+ L + R D + Y +
Sbjct: 162 EDCWEGDTIVSLPDLDTTETAVRTIWYDWVADLVSNYSVDGLRIDSVLEVQPDFFPGYNK 221
Query: 212 GARPIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVK 271
+ +G + +++ + ++ + F + +
Sbjct: 222 AS--------GVYCVGEIDNGNPASDCPYQKVLDGVLNYPIYWQLLYAFESSSGSISNLY 273
Query: 272 GQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFPSNHIMEGYAYILMHPGI 331
+ P+ F++NHD A + + +YI + GI
Sbjct: 274 NMIKSVASDC--------SDPTLLGNFIENHDN-PRFAKYTSDYSQAKNVLSYIFLSDGI 324
Query: 332 PSVFY-------------------DHFYDWGDSIHNQIVKLMDVRRQ 359
P V+ YD ++ I +R+
Sbjct: 325 PIVYAGEEQHYAGGKVPYNREATWLSGYDTSAELYTWIATTNAIRKL 371
|
| >d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]} Length = 382 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Neopullulanase, central domain species: Bacillus stearothermophilus [TaxId: 1422]
Score = 69.7 bits (169), Expect = 1e-13
Identities = 38/294 (12%), Positives = 86/294 (29%), Gaps = 13/294 (4%)
Query: 45 WRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQ 104
+ + + + G T ++L P S + Y + + ++ +G + LK L+ + +
Sbjct: 52 LQGIIDHLDYLVDLGITGIYLTPIFRSPSNHKYDTADYFEVDPHFGDKETLKTLIDRCHE 111
Query: 105 HKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLS--WDEHAVTSCTGGLGNGSTGDNFHG 162
+R M D V NH + + + H T N T
Sbjct: 112 KGIRVMLDAVFNHCGYEFAPFQDVWKNGESSKYKDWFHIHEFPLQTEPRPNYDTFAFVPQ 171
Query: 163 VPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGARPIFSVGEY 222
+P ++ V++ ++ + +R D A ++ +E+ + + + Y
Sbjct: 172 MPKLNTANPEVKRYLLDVATYWIREFDIDGWRLDVANEIDHEFWREFRQEVKALKP-DVY 230
Query: 223 WDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKGQFWRLRDAQG 282
++ D + A + + +
Sbjct: 231 ILGEIWHDAMPWLRGDQFDAVMNYPFTDGVLRFFAKEEISARQFANQMMHVLHS------ 284
Query: 283 KPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFPSNHIMEGYAYILMHPGIPSVFY 336
A L +HDT + + + L G P ++Y
Sbjct: 285 ----YPNNVNEAAFNLLGSHDTSRILTVCGGDIRKVKLLFLFQLTFTGSPCIYY 334
|
| >d2guya2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus oryzae, Taka-amylase [TaxId: 5062]} Length = 381 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Fungal alpha-amylases species: Aspergillus oryzae, Taka-amylase [TaxId: 5062]
Score = 69.3 bits (168), Expect = 2e-13
Identities = 66/349 (18%), Positives = 114/349 (32%), Gaps = 53/349 (15%)
Query: 45 WRNLERKVPDISKSGFTSVWLPPATHSF--------APEGYLPQNLYSLNSSYGSEHLLK 96
W+ + K+ I GFT++W+ P T A GY Q++YSLN +YG+ LK
Sbjct: 42 WQGIIDKLDYIQGMGFTAIWITPVTAQLPQTTAYGDAYHGYWQQDIYSLNENYGTADDLK 101
Query: 97 ALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGST 156
AL + + + M D+V NH G Y+ + H
Sbjct: 102 ALSSALHERGMYLMVDVVANHMGYDGAGSSVDYSVFKPFSSQDYFHPFCFIQNYEDQTQV 161
Query: 157 -----GDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIE 211
GDN +P++D T+ V+ + W+ L + R D + + Y +
Sbjct: 162 EDCWLGDNTVSLPDLDTTKDVVKNEWYDWVGSLVSNYSIDGLRIDTVKHVQKDFWPGYNK 221
Query: 212 GARPIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVK 271
++ +GE D + D ++ L A K
Sbjct: 222 A-AGVYCIGEVLDGDPAYTCPYQNVMDGV-----------------LNYPIYYPLLNAFK 263
Query: 272 GQFWRLRDAQGKPPGVMGWWPS--RAVTFLDNHDTGSTQAHWPFPSNHIMEGYAYILMHP 329
+ D V P TF++NHD ++ + A+I+++
Sbjct: 264 STSGSMDDLYNMINTVKSDCPDSTLLGTFVENHDNPRFASYTNDIALAKN-VAAFIILND 322
Query: 330 GIPSVFY-------------------DHFYDWGDSIHNQIVKLMDVRRQ 359
GIP ++ Y ++ I +R
Sbjct: 323 GIPIIYAGQEQHYAGGNDPANREATWLSGYPTDSELYKLIASANAIRNY 371
|
| >d1wzaa2 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Halothermothrix orenii [TaxId: 31909]} Length = 409 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Halothermothrix orenii [TaxId: 31909]
Score = 68.5 bits (166), Expect = 3e-13
Identities = 55/313 (17%), Positives = 98/313 (31%), Gaps = 39/313 (12%)
Query: 49 ERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVR 108
+ I+ G +WL P S + GY + Y +N YG+ L+ Q ++
Sbjct: 38 DGDPETIADLGVNGIWLMPIFKSPSYHGYDVTDYYKINPDYGTLEDFHKLVEAAHQRGIK 97
Query: 109 AMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFH------- 161
+ D+ INH + + A G +H
Sbjct: 98 VIIDLPINHTSERHPWFLKASRDKNSEYRDYYVWAGPDTDTKETKLDGGRVWHYSPTGMY 157
Query: 162 ------GVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARG-----------YSAK 204
G+P++++ V++ +I ++ G FR D A +
Sbjct: 158 YGYFWSGMPDLNYNNPEVQEKVIGIAKYWLKQ-GVDGFRLDGAMHIFPPAQYDKNFTWWE 216
Query: 205 YVKEYIEGARPIFSVGEYW-DSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTK 263
++ IE +P++ VGE W S + + ++ + T + F F K
Sbjct: 217 KFRQEIEEVKPVYLVGEVWDISETVAPYFKYGFDSTFNFKLAEAVIATAKAGFPFGFNKK 276
Query: 264 GILQEAVKGQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFPSNHIMEGYA 323
+ G +G+ FL NHD N +
Sbjct: 277 -------------AKHIYGVYDREVGFGNYIDAPFLTNHDQNRILDQLGQDRNKARVAAS 323
Query: 324 YILMHPGIPSVFY 336
L PG P ++Y
Sbjct: 324 IYLTLPGNPFIYY 336
|
| >d3bmva4 c.1.8.1 (A:1-406) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]} Length = 406 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Cyclodextrin glycosyltransferase species: Thermoanaerobacterium [TaxId: 28895]
Score = 66.7 bits (161), Expect = 1e-12
Identities = 45/338 (13%), Positives = 108/338 (31%), Gaps = 34/338 (10%)
Query: 55 ISKSGFTSVWLPPATH-------------SFAPEGYLPQNLYSLNSSYGSEHLLKALLHK 101
++ G T++W+P S + GY ++ N +GS + L++
Sbjct: 66 LTGMGVTAIWIPQPVENIYAVLPDSTFGGSTSYHGYWARDFKRTNPYFGSFTDFQNLINT 125
Query: 102 MKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFH 161
H ++ + D NH ++ T+ T G + G +F
Sbjct: 126 AHAHNIKVIIDFAPNHTSPASETDPTYAENGRLYDNGTLLGGYTNDTNGYFHHYGGTDFS 185
Query: 162 GVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGARPIFSVGE 221
+ + F D+ + + + + + + +
Sbjct: 186 SYEDGIYRNLFDLADLNQQNSTIDSYLKSAIKVWLDMGIDGIRLDAVKHMPFGWQKNFMD 245
Query: 222 YWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKGQFWRLR--D 279
S ++ ++ + N + DF +++ + + D
Sbjct: 246 SILSYRPVFTFGEWFLGTNEIDVNNTYFANESGMSLLDFRFSQKVRQVFRDNTDTMYGLD 305
Query: 280 AQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFPSNHIMEGYAYILMHPGIPSVFY--- 336
+ + + + VTF+DNHD + + + + + A+ L G+P+++Y
Sbjct: 306 SMIQSTASDYNFINDMVTFIDNHDMD--RFYNGGSTRPVEQALAFTLTSRGVPAIYYGTE 363
Query: 337 -------DHF-------YDWGDSIHNQIVKLMDVRRQQ 360
D + ++ + +N I KL +R+
Sbjct: 364 QYMTGNGDPYNRAMMTSFNTSTTAYNVIKKLAPLRKSN 401
|
| >d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} Length = 382 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltogenic amylase, central domain species: Thermoactinomyces vulgaris, TVAII [TaxId: 2026]
Score = 64.3 bits (155), Expect = 7e-12
Identities = 36/295 (12%), Positives = 87/295 (29%), Gaps = 15/295 (5%)
Query: 45 WRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQ 104
+ + ++P + + G T+++ P S + Y + +++ +G + L+ + +
Sbjct: 52 LKGVIDRLPYLEELGVTALYFTPIFASPSHHKYDTADYLAIDPQFGDLPTFRRLVDEAHR 111
Query: 105 HKVRAMADIVINHRVGTTQGHGGKYNRYDGI---PLSWDEHAVTSCTGGLGNGSTGDNFH 161
++ + D V NH + + + E S T +
Sbjct: 112 RGIKIILDAVFNHAGDQFFAFRDVLQKGEQSRYKDWFFIEDFPVSKTSRTNYETFAVQVP 171
Query: 162 GVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGARPIFSVGE 221
+P + V++ + R+ G +R D A + +E+ + +
Sbjct: 172 AMPKLRTENPEVKEYLFDVARFWMEQ-GIDGWRLDVANEVDHAFWREFRRLVKSLNPDAL 230
Query: 222 YWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKGQFWRLRDAQ 281
+++ G + + + F G +
Sbjct: 231 IVGEIWHDASGWLMGDQFDSVMNYLFRE------SVIRFFATGEIHAERFDAELTRARML 284
Query: 282 GKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFPSNHIMEGYAYILMHPGIPSVFY 336
G W LD+HDT + + + G P ++Y
Sbjct: 285 YPEQAAQGLW-----NLLDSHDTERFLTSCGGNEAKFRLAVLFQMTYLGTPLIYY 334
|
| >d1h3ga3 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central domain {Flavobacterium sp. 92 [TaxId: 197856]} Length = 422 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Cyclomaltodextrinase, central domain species: Flavobacterium sp. 92 [TaxId: 197856]
Score = 63.2 bits (152), Expect = 1e-11
Identities = 45/308 (14%), Positives = 87/308 (28%), Gaps = 19/308 (6%)
Query: 45 WRNLERKVPDISKSGFTSVWLPPATHS----FAPEGYLPQNLYSLNSSYGSEHLLKALLH 100
R + I+ GFT +W P + ++ GY + Y ++ YGS L
Sbjct: 52 IRGTIDHLDYIAGLGFTQLWPTPLVENDAAAYSYHGYAATDHYRIDPRYGSNEDFVRLST 111
Query: 101 KMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHA---------VTSCTGGL 151
+ ++ + + D+V++H +
Sbjct: 112 EARKRGMGLIQDVVLSHIGKHHWWMKDLPTPDWINYGGKFVPTQHHRVAVQDPYAAQADS 171
Query: 152 GNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIE 211
N + G G+P+++ T V +I W G R D ++ EY
Sbjct: 172 ENFTKGWFVEGMPDLNQTNPLVANYLIQNNIWWIEYAGLSGLRIDTYGYSDGAFLTEYTR 231
Query: 212 GARPIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVK 271
+ + + N+ T L + DF ++ A+
Sbjct: 232 RLMAEYPRLNMVGEEWSTRVPVVARWQRGKA---NFDGYTSHLPSLMDFPLVDAMRNALS 288
Query: 272 GQFWR---LRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFPSNHIMEGYAYILMH 328
+ + P V F NHD + + +++
Sbjct: 289 KTGEENGLNEVYETLSLDYLYPEPQNLVLFGGNHDMARMFSAAGEDFDRWRMNLVFLMTM 348
Query: 329 PGIPSVFY 336
P IP +
Sbjct: 349 PRIPQFYS 356
|
| >d1ji1a3 c.1.8.1 (A:123-554) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAI [TaxId: 2026]} Length = 432 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltogenic amylase, central domain species: Thermoactinomyces vulgaris, TVAI [TaxId: 2026]
Score = 63.2 bits (152), Expect = 2e-11
Identities = 47/316 (14%), Positives = 95/316 (30%), Gaps = 24/316 (7%)
Query: 45 WRNLERKVPDISKS-GFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMK 103
+++K+ I K+ G ++L P + Y Q+ +++ ++G L+ L++ +
Sbjct: 68 LAGIDQKLGYIKKTLGANILYLNPIFKAPTNHKYDTQDYMAVDPAFGDNSTLQTLINDIH 127
Query: 104 QH----KVRAMADIVINHRVGTTQ-----GHGGKYNRYDGIPLSWDEHAVTSCTGGLGNG 154
K + D V NH + + Y+ W +
Sbjct: 128 STANGPKGYLILDGVFNHTGDSHPWFDKYNNFSSQGAYESQSSPWYNYYTFYTWPDSYAS 187
Query: 155 STGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGA- 213
G N N ++ VR I + T + D R +A+YV
Sbjct: 188 FLGFNSLPKLNYGNSGSAVRGVIYNNSNSVAKTYLNPPYSVDGWRLDAAQYVDANGNNGS 247
Query: 214 -RPIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTT-KGILQEAVK 271
+ + + + + W Q AA +F + E +
Sbjct: 248 DVTNHQIWSEFRNAVKGVNSNAAIIGEYWGNANPWTAQGNQWDAATNFDGFTQPVSEWIT 307
Query: 272 GQFWRLRDA-----------QGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFPSNHIME 320
G+ ++ A +G + FL NHD
Sbjct: 308 GKDYQNNSASISTTQFDSWLRGTRANYPTNVQQSMMNFLSNHDITRFATRSGGDLWKTYL 367
Query: 321 GYAYILMHPGIPSVFY 336
+ + + G P+++Y
Sbjct: 368 ALIFQMTYVGTPTIYY 383
|
| >d1qhoa4 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]} Length = 407 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Cyclodextrin glycosyltransferase species: Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]
Score = 62.4 bits (150), Expect = 3e-11
Identities = 54/361 (14%), Positives = 111/361 (30%), Gaps = 56/361 (15%)
Query: 45 WRNLERKVPDISKSGFTSVWLPP---------ATHSFAPEGYLPQNLYSLNSSYGSEHLL 95
+ +K+P + + G T++WL P T + GY ++ + +G+
Sbjct: 51 LEGVRQKLPYLKQLGVTTIWLSPVLDNLDTLAGTDNTGYHGYWTRDFKQIEEHFGNWTTF 110
Query: 96 KALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNR-----------------YDGIPLS 138
L++ Q+ ++ + D V NH G
Sbjct: 111 DTLVNDAHQNGIKVIVDFVPNHSTPFKANDSTFAEGGALYNNGTYMGNYFDDATKGYFHH 170
Query: 139 WDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFA 198
+ + + D ++ + G R D
Sbjct: 171 NGDISNWDDRYEAQWKNFTDPAGFSLADLSQENGTIAQYLTDAAVQLVAHGADGLRIDAV 230
Query: 199 RGYSAKYVKEYIEGAR---PIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLS 255
+ +++ + K + IF VGE++ ++ L+ + + + +G
Sbjct: 231 KHFNSGFSKSLADKLYQKKDIFLVGEWYGDDPGTANHLEKVR---------YANNSGVNV 281
Query: 256 AAFDFTTKGILQEAVKGQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFPS 315
FD T Q + G + +TF+DNHD + +
Sbjct: 282 LDFDLNTVIRNVFGTFTQTMYDLNNMVNQTGNEYKYKENLITFIDNHDMSRFLSVNSNKA 341
Query: 316 NHIMEGYAYILMHPGIPSVFY----------DHF-------YDWGDSIHNQIVKLMDVRR 358
N + + A+IL G PS++Y D + +D + ++ L +RR
Sbjct: 342 N-LHQALAFILTSRGTPSIYYGTEQYMAGGNDPYNRGMMPAFDTTTTAFKEVSTLAGLRR 400
Query: 359 Q 359
Sbjct: 401 N 401
|
| >d1g5aa2 c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysaccharea [TaxId: 489]} Length = 554 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Amylosucrase species: Neisseria polysaccharea [TaxId: 489]
Score = 60.0 bits (144), Expect = 2e-10
Identities = 40/364 (10%), Positives = 94/364 (25%), Gaps = 37/364 (10%)
Query: 45 WRNLERKVPDISKSGFTSVWLPPATHSFAPE---GYLPQNLYSLNSSYGSEHLLKALLHK 101
+ L+ K+P + G T + L P + GY + +N + G+ L+ ++
Sbjct: 112 LKGLKDKIPYFQELGLTYLHLMPLFKCPEGKSDGGYAVSSYRDVNPALGTIGDLREVIAA 171
Query: 102 MKQHKVRAMADIVINH-----------RVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGG 150
+ + + A+ D + NH G Y D + +
Sbjct: 172 LHEAGISAVVDFIFNHTSNEHEWAQRCAAGDPLFDNFYYIFPDRRMPDQYDRTLREIFPD 231
Query: 151 LGNGSTGD---------NFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGY 201
G F+ + + +A +G R D
Sbjct: 232 QHPGGFSQLEDGRWVWTTFNSFQWDLNYSNPWVFRAMAGEMLFLANLGVDILRMDAVAFI 291
Query: 202 SAKYVKEYIEGARPIFSVGEYWDSCNYNSHGLDYNQDSHR--QRIINWIDGTGQLSAAFD 259
+ + + + + + + ++ +++ +I
Sbjct: 292 WKQMGTSCENLPQAHALIRAFNAVMRIAAPAVFFKSEAIVHPDQVVQYIGQDECQIGYNP 351
Query: 260 FTTKGILQEAVKGQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHD----------TGSTQA 309
+ + L A + + V ++ +HD
Sbjct: 352 LQMALLWNTLATREVNLLHQALTYRHNL--PEHTAWVNYVRSHDDIGWTFADEDAAYLGI 409
Query: 310 HWPFPSNHIMEGYAYILMHPGIPSVFYDHFYDWGDSIHNQIVKLMDVRRQQDIHSRSSIK 369
+ + V + + GD + + Q D H+ IK
Sbjct: 410 SGYDHRQFLNRFFVNRFDGSFARGVPFQYNPSTGDCRVSGTAAALVGLAQDDPHAVDRIK 469
Query: 370 ILEA 373
+L +
Sbjct: 470 LLYS 473
|
| >d1ea9c3 c.1.8.1 (C:122-503) Maltogenic amylase, central domain {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} Length = 382 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltogenic amylase, central domain species: Bacillus sp., cyclomaltodextrinase [TaxId: 1409]
Score = 58.2 bits (139), Expect = 6e-10
Identities = 41/295 (13%), Positives = 85/295 (28%), Gaps = 14/295 (4%)
Query: 45 WRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQ 104
+ + + +SK G +V+ P + Y ++ + ++ +G + LK L+ +
Sbjct: 50 LQGVIDHLDHLSKLGVNAVYFTPLFKATTNHKYDTEDYFQIDPQFGDKDTLKKLVDLCHE 109
Query: 105 HKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLS---WDEHAVTSCTGGLGNGSTGDNFH 161
+R + D V NH T + G+ T
Sbjct: 110 RGIRVLLDAVFNHSGRTFPPFVDVLKNGEKSKYKDWFHIRSLPLEVVDGIPTYDTFAFEP 169
Query: 162 GVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGARPIFSVGE 221
+P ++ V++ ++ + G +R D A S ++ +E+ +
Sbjct: 170 LMPKLNTEHPDVKEYLLKAAEYWIRETGIDGWRLDVANEVSHQFWREFRRVVKQANPDAY 229
Query: 222 YWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKGQFWRLRDAQ 281
+ S + + A DF I + A
Sbjct: 230 ILGEVWHESSIWLEGDQFDAVMNYPFTN------AVLDFFIHQIADAEKFSFMLGKQLA- 282
Query: 282 GKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFPSNHIMEGYAYILMHPGIPSVFY 336
G LD+HDT + + + G P ++Y
Sbjct: 283 ----GYPRQASEVMFNLLDSHDTARLLTQADGDKRKMKLAVLFQFTYFGTPCIYY 333
|
| >d1lwha2 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Thermotoga maritima [TaxId: 2336]} Length = 391 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: 4-alpha-glucanotransferase species: Thermotoga maritima [TaxId: 2336]
Score = 58.1 bits (139), Expect = 7e-10
Identities = 53/307 (17%), Positives = 94/307 (30%), Gaps = 31/307 (10%)
Query: 45 WRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQ 104
+R L+ V + + G VWL P S + GY + YS + YGSE K ++
Sbjct: 22 FRGLKNAVSYLKELGIDFVWLMPVFSSISFHGYDVVDFYSFKAEYGSEREFKEMIEAFHD 81
Query: 105 HKVRAMADIVINHRVGTT---QGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGST----- 156
++ + D+ I+H Q Y + ++
Sbjct: 82 SGIKVVLDLPIHHTGFLHTWFQKALKGDPHYRDYYVWANKETDLDERREWDGEKIWHPLE 141
Query: 157 -----GDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIE 211
F + + D + L +G FRFD A+ +
Sbjct: 142 DGRFYRGLFGPFSPDLNYDNPQVFDEMKRLVLHLLDMGVDGFRFDAAKHMRDTIEQNVRF 201
Query: 212 GARPIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAV- 270
+ + + + + + + +F T ++EAV
Sbjct: 202 WKYFLSDLKGIFLAEIWAEARM-------------VDEHGRIFGYMLNFDTSHCIKEAVW 248
Query: 271 KGQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWP-FPSNHIMEGYAYILMHP 329
K L ++ + + P V F NHD + F I + + P
Sbjct: 249 KENTRVLIESIERAVIAKDYLP---VNFTSNHDMSRLASFEGGFSKEKIKLSISILFTLP 305
Query: 330 GIPSVFY 336
G+P VFY
Sbjct: 306 GVPLVFY 312
|
| >d1iv8a2 c.1.8.1 (A:1-653) Maltooligosyl trehalose synthase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} Length = 653 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltooligosyl trehalose synthase species: Archaeon Sulfolobus acidocaldarius [TaxId: 2285]
Score = 56.9 bits (137), Expect = 3e-09
Identities = 14/75 (18%), Positives = 29/75 (38%), Gaps = 2/75 (2%)
Query: 45 WRNLERKVPDISKSGFTSVWLPPATHS--FAPEGYLPQNLYSLNSSYGSEHLLKALLHKM 102
+ ++ + G + ++L P + + GY + +N G E + L+
Sbjct: 16 FGDVIDNLWYFKDLGVSHLYLSPVLMASPGSNHGYDVIDHSRINDELGGEKEYRRLIETA 75
Query: 103 KQHKVRAMADIVINH 117
+ + DIV NH
Sbjct: 76 HTIGLGIIQDIVPNH 90
|
| >d1m53a2 c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Klebsiella sp., lx3 [TaxId: 576]} Length = 478 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Isomaltulose synthase PalI species: Klebsiella sp., lx3 [TaxId: 576]
Score = 56.6 bits (135), Expect = 3e-09
Identities = 53/401 (13%), Positives = 101/401 (25%), Gaps = 58/401 (14%)
Query: 45 WRNLERKVPDISKSGFTSVWLPPATHS-FAPEGYLPQNLYSLNSSYGSEHLLKALLHKMK 103
R + K+ + G ++W+ P S GY N + YG+ +L+ +MK
Sbjct: 30 IRGIIEKLDYLKSLGIDAIWINPHYDSPNTDNGYDISNYRQIMKEYGTMEDFDSLVAEMK 89
Query: 104 QHKVRAMADIVINHRVGT------------------TQGHGGKYNRYDGIPLSWDEHAVT 145
+ +R M D+VINH GK N+ S+ +
Sbjct: 90 KRNMRLMIDVVINHTSDQHPWFIQSKSDKNNPYRDYYFWRDGKDNQPPNNYPSFFGGSAW 149
Query: 146 SCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYS--- 202
G P+++ VR+D+ A LR+ + G RFD YS
Sbjct: 150 QKDAKSGQYYLHYFARQQPDLNWDNPKVREDLYAMLRFWLDK-GVSGMRFDTVATYSKIP 208
Query: 203 --------------------------AKYVKEYIEGARPIFSVGEYWDSCNYNSHGLDYN 236
+ + + + + GE + S
Sbjct: 209 GFPNLTPEQQKNFAEQYTMGPNIHRYIQEMNRKVLSRYDVATAGEIFGVPLDRSSQFFDR 268
Query: 237 QDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKGQFWRLRDAQGKPPGVMGWWPSRAV 296
+ + + + K + ++
Sbjct: 269 RRHELNMAFMFDLIRLDRDSNERWRHKSWSLSQFRQIISKM---DVTVGKYGWNTFFLDN 325
Query: 297 TFLDNHDTGSTQAHWPFPSNHIMEGYAYILMHPGIPSVFYDHFYDWGDSIHNQIVKLMDV 356
+ + L P ++ G + +
Sbjct: 326 HDNPRAVSHFGDDRPQWREASAKALATITLTQRATPFIYQ------GSELGMTNYPFRQL 379
Query: 357 RRQQDIHSRSSIKILEAQSNLYSAIIGDKVCMKIGDGSWCP 397
DI + + + + D V + D S P
Sbjct: 380 NEFDDIEVKGFWQDYVQSGKVTATEFLDNVRLTSRDNSRTP 420
|
| >d1m7xa3 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enzyme, central domain {Escherichia coli [TaxId: 562]} Length = 396 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: 1,4-alpha-glucan branching enzyme, central domain species: Escherichia coli [TaxId: 562]
Score = 55.8 bits (133), Expect = 4e-09
Identities = 31/299 (10%), Positives = 69/299 (23%), Gaps = 11/299 (3%)
Query: 49 ERKVPDISKSGFTSVWLPPATHSFAPE--GYLPQNLYSLNSSYGSEHLLKALLHKMKQHK 106
++ VP GFT + L P GY P LY+ +G+ + +
Sbjct: 44 DQLVPYAKWMGFTHLELLPINEHPFDGSWGYQPTGLYAPTRRFGTRDDFRYFIDAAHAAG 103
Query: 107 VRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNI 166
+ + D V H E + N + + +
Sbjct: 104 LNVILDWVPGHFPTDDFALAEFDGTNLYEHSDPREGYHQDWNTLIYNYGRREVSNFLVGN 163
Query: 167 DHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGARPIFSVGEYWDSC 226
+ + + + R + + +E +E + +
Sbjct: 164 ALYWIERFGIDALRVDAVASMIYRDYSRKEGEWIPNEFGGRENLEAIEFLRNTNRILGEQ 223
Query: 227 NYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKGQFWRLRDAQGKPPG 286
+ + G ++ + +K + K
Sbjct: 224 VSGAVTMAEESTDFPGVSRPQDMGGLGFWYKWNLGWMHDTLDYMKLDPVYRQYHHDKLTF 283
Query: 287 VMGWWPSRAVT-----FLDNHDTGSTQAHWPFPSNHIMEG----YAYILMHPGIPSVFY 336
+ + + H S P + Y ++ PG +F
Sbjct: 284 GILYNYTENFVLPLSHDEVVHGKKSILDRMPGDAWQKFANLRAYYGWMWAFPGKKLLFM 342
|
| >d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} Length = 400 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Glycosyltrehalose trehalohydrolase, central domain species: Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]
Score = 54.3 bits (129), Expect = 1e-08
Identities = 43/302 (14%), Positives = 82/302 (27%), Gaps = 14/302 (4%)
Query: 45 WRNLERKVPDISKSGFTSVWLPPATHSFAPE--GYLPQNLYSLNSSYGSEHLLKALLHKM 102
+ + RK+ + G T++ + P GY LY++ +SYG + L+ +
Sbjct: 28 FEGVIRKLDYLKDLGITAIEIMPIAQFPGKRDWGYDGVYLYAVQNSYGGPEGFRKLVDEA 87
Query: 103 KQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHG 162
+ + + D+V NH G + + S
Sbjct: 88 HKKGLGVILDVVYNH----VGPEGNYMVKLGPYFSQKYKTPWGLTFNFDDAESDEVRKFI 143
Query: 163 VPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYI---EGARPIFSV 219
+ N+++ D + KY + I + P
Sbjct: 144 LENVEYWIKEYNVDGFRLDAVHAIIDTSPKHILEEIADVVHKYNRIVIAESDLNDPRVVN 203
Query: 220 GEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKGQFWRLRD 279
+ N ++ +D S + G D K V +
Sbjct: 204 PKEKCGYNIDAQWVDDFHHSIHAYLTGERQGYYTDFGNLDDIVKSYKDVFVYDGKYSNFR 263
Query: 280 AQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFPSNHIME-----GYAYILMHPGIPSV 334
+ V V ++ NHD + + A L+ P IP +
Sbjct: 264 RKTHGEPVGELDGCNFVVYIQNHDQVGNRGKGERIIKLVDRESYKIAAALYLLSPYIPMI 323
Query: 335 FY 336
F
Sbjct: 324 FM 325
|
| >d1uoka2 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 1396]} Length = 479 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Oligo-1,6, glucosidase species: Bacillus cereus [TaxId: 1396]
Score = 53.9 bits (128), Expect = 2e-08
Identities = 53/399 (13%), Positives = 111/399 (27%), Gaps = 53/399 (13%)
Query: 45 WRNLERKVPDISKSGFTSVWLPPATHS-FAPEGYLPQNLYSLNSSYGSEHLLKALLHKMK 103
R + K+ + + G +WL P S GY + + + +G+ LLH+M
Sbjct: 30 LRGIISKLDYLKELGIDVIWLSPVYESPNDDNGYDISDYCKIMNEFGTMEDWDELLHEMH 89
Query: 104 QHKVRAMADIVINHRVGTTQGHGGKYNRYDG------------------IPLSWDEHAVT 145
+ ++ M D+V+NH D + +
Sbjct: 90 ERNMKLMMDLVVNHTSDEHNWFIESRKSKDNKYRDYYIWRPGKEGKEPNNWGAAFSGSAW 149
Query: 146 SCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKY 205
P+++ VR+D+ +++ G FR D S +
Sbjct: 150 QYDEMTDEYYLHLFSKKQPDLNWDNEKVRQDVYEMMKFWLE-KGIDGFRMDVINFISKEE 208
Query: 206 VKEYIEGARPIFSVGEYWDSCNYNSHGL------------------DYNQDSHRQRIINW 247
+E + G N H + + + +
Sbjct: 209 GLPTVETEEEGYVSGHKHFMNGPNIHKYLHEMNEEVLSHYDIMTVGEMPGVTTEEAKLYT 268
Query: 248 IDGTGQLSAAFDFTTKGILQEAVKGQFWRLRDAQGKPPGVMGW-----WPSRAVTFLDNH 302
+ +L F F + + + W + +NH
Sbjct: 269 GEERKELQMVFQFEHMDLDSGEGGKWDVKPCSLLTLKENLTKWQKALEHTGWNSLYWNNH 328
Query: 303 DTGSTQAHWPFPSNHIMEG----YAYILMHPGIPSVFYDHFYDWGDSIHNQIVKLMDVRR 358
D + + + +E + M G P ++ G+ I V+ +
Sbjct: 329 DQPRVVSRFGNDGMYRIESAKMLATVLHMMKGTPYIYQ------GEEIGMTNVRFESIDE 382
Query: 359 QQDIHSRSSIKILEAQSNLYSAIIGDKVCMKIGDGSWCP 397
+DI + + K + + + +K D + P
Sbjct: 383 YRDIETLNMYKEKVMERGEDIEKVMQSIYIKGRDNARTP 421
|
| >d1bf2a3 c.1.8.1 (A:163-637) Isoamylase, central domain {Pseudomonas amyloderamosa [TaxId: 32043]} Length = 475 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Isoamylase, central domain species: Pseudomonas amyloderamosa [TaxId: 32043]
Score = 52.0 bits (123), Expect = 7e-08
Identities = 55/365 (15%), Positives = 104/365 (28%), Gaps = 55/365 (15%)
Query: 45 WRNLERKVPDISKSGFTSVWLPP--------------ATHSFAPEGYLPQNLYSLNSSYG 90
+ K ++ G T+V P + + GY+ +N +S + Y
Sbjct: 42 YYGAGLKASYLASLGVTAVEFLPVQETQNDANDVVPNSDANQNYWGYMTENYFSPDRRYA 101
Query: 91 SEHL-------LKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHA 143
+A++ ++ D+V NH I
Sbjct: 102 YNKAAGGPTAEFQAMVQAFHNAGIKVYMDVVYNH-TAEGGTWTSSDPTTATIYSWRGLDN 160
Query: 144 VTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYS- 202
T GN DN N + + I+ L + NT+G FRFD A
Sbjct: 161 ATYYELTSGNQYFYDNTGIGANFNTYNTVAQNLIVDSLAYWANTMGVDGFRFDLASVLGN 220
Query: 203 AKYVKEYIEGARPIFSVGEYWDSCNYNSHGLDYNQD----------------------SH 240
+ Y A + G +D+ + N ++ +
Sbjct: 221 SCLNGAYTASAPNCPNGGYNFDAADSNVAINRILREFTVRPAAGGSGLDLFAEPWAIGGN 280
Query: 241 RQRIINWIDGTGQLSAAFDFTTKGILQEAVKGQFWRLRDAQGKPPGVM-----GWWPSRA 295
++ + G + + F + + E + +DA G P +
Sbjct: 281 SYQLGGFPQGWSEWNGLFRDSLRQAQNELGSMTIYVTQDANDFSGSSNLFQSSGRSPWNS 340
Query: 296 VTFLDNHDTGSTQAHWPFPSNHIMEGYAYILMHPGIPSVFYDHFYDWGDSIHNQIVKLMD 355
+ F+D HD + + + + + + Y G Y W + +D
Sbjct: 341 INFIDVHDGMTLKDVYSCNGANNSQAWPYGPSDGG-----TSTNYSWDQGMSAGTGAAVD 395
Query: 356 VRRQQ 360
RR
Sbjct: 396 QRRAA 400
|
| >d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]} Length = 420 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Glycosyltrehalose trehalohydrolase, central domain species: Deinococcus radiodurans [TaxId: 1299]
Score = 50.5 bits (119), Expect = 2e-07
Identities = 42/302 (13%), Positives = 81/302 (26%), Gaps = 14/302 (4%)
Query: 45 WRNLERKVPDISKSGFTSVWLPPATHSFAPE---GYLPQNLYSLNSSYGSEHLLKALLHK 101
+R K+P + + G T++ + P +F + GY Y+ + YG L AL+
Sbjct: 33 YRAAAEKLPYLKELGVTAIQVMPL-AAFDGQRGWGYDGAAFYAPYAPYGRPEDLMALVDA 91
Query: 102 MKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFH 161
+ + D+V NH G + + Y +
Sbjct: 92 AHRLGLGVFLDVVYNHF-GPSGNYLSSYAPSYFTDRFSSAWGMGLDYAEPHMRRYVTGNA 150
Query: 162 GVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGARPIFSVGE 221
+ D+ +R D ++ T + + + P
Sbjct: 151 RMWLRDYHFDGLRLDATPYMTDDSETHILTELAQEIHELGGTHLLLAEDHRNLPDLVTVN 210
Query: 222 YWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKGQFWRLRDAQ 281
+ D + + ++ + G A +G E +
Sbjct: 211 HLDGIWTDDFHHETRVTLTGEQEGYYAGYRGGAEALAYTIRRGWRYEGQFWAVKGEEHER 270
Query: 282 GKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFPS-------NHIMEGYAYILMHPGIPSV 334
G P V + NHD + + A +L P P +
Sbjct: 271 GHPS--DALEAPNFVYCIQNHDQIGNRPLGERLHQSDGVTLHEYRGAAALLLTLPMTPLL 328
Query: 335 FY 336
F
Sbjct: 329 FQ 330
|
| >d1r7aa2 c.1.8.1 (A:1-434) Sucrose phosphorylase {Bifidobacterium adolescentis [TaxId: 1680]} Length = 434 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Sucrose phosphorylase species: Bifidobacterium adolescentis [TaxId: 1680]
Score = 42.4 bits (98), Expect = 6e-05
Identities = 30/299 (10%), Positives = 72/299 (24%), Gaps = 17/299 (5%)
Query: 46 RNLERKVPDISKSGFTSVWLPP--ATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMK 103
+++ + + V + P A G+ P + ++ GS + L
Sbjct: 20 KSMTDILRTRFDGVYDGVHILPFFTPFDGADAGFDPIDHTKVDERLGSWDDVAELSKTHN 79
Query: 104 QHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGV 163
M D ++NH + + S + + NG+T ++ G+
Sbjct: 80 -----IMVDAIVNH---MSWESKQFQDVLAKGEESEYYPMFLTMSSVFPNGATEEDLAGI 131
Query: 164 PNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGARPIFSVGEYW 223
F R + + Q D +Y+ +
Sbjct: 132 YRPRPGLPFTHYKFAGKTRLVWVSFTPQQVDIDTDSDKGWEYLMSIFDQMAASHVSYIRL 191
Query: 224 DSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKGQFWRLRDAQGK 283
D+ Y + + + + ++ + + +
Sbjct: 192 DAVGYGAKEAGTSCFMTPKTFKLISRLREEGVKRGLEIL-------IEVHSYYKKQVEIA 244
Query: 284 PPGVMGWWPSRAVTFLDNHDTGSTQAHWPFPSNHIMEGYAYILMHPGIPSVFYDHFYDW 342
+ + L TG + + + H GI +
Sbjct: 245 SKVDRVYDFALPPLLLHALSTGHVEPVAHWTDIRPNNAVTVLDTHDGIGVIDIGSDQLD 303
|
| >d1gjwa2 c.1.8.1 (A:1-572) Maltosyltransferase {Thermotoga maritima [TaxId: 2336]} Length = 572 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltosyltransferase species: Thermotoga maritima [TaxId: 2336]
Score = 37.7 bits (86), Expect = 0.002
Identities = 33/352 (9%), Positives = 81/352 (23%), Gaps = 42/352 (11%)
Query: 45 WRNLERKVPDISKSGFTSVWLPPATHS-------FAPEGYLPQNLYSLNSSY-------- 89
+ + +P + G +++L P + AP Y +N L+ Y
Sbjct: 119 FFKMMLLLPFVKSLGADAIYLLPVSRMSDLFKKGDAPSPYSVKNPMELDERYHDPLLEPF 178
Query: 90 GSEHLLKALLHKMKQHKVRAMADIVINH-----------------RVGTTQGHGGKYNRY 132
+ KA + +R + D +
Sbjct: 179 KVDEEFKAFVEACHILGIRVILDFIPRTAARDSDLIREHPDWFYWIKVEELADYTPPRAE 238
Query: 133 DGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQD 192
+ DE + F PN+ Q + I +
Sbjct: 239 ELPFKVPDEDELEIIYNKENVKRHLKKFTLPPNLIDPQ--KWEKIKREEGN------ILE 290
Query: 193 FRFDFARGYSAKYVKEYIEGARPIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTG 252
+ + I +P + + + D ++ + +
Sbjct: 291 LIVKEFGIITPPGFSDLINDPQPTWDDVTFLRLYLDHPEASKRFLDPNQPPYVLYDVIKA 350
Query: 253 QLSAAFDFTTKGILQEAVKGQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWP 312
+ + A ++ + MG + + L + +
Sbjct: 351 SKFPGKEPNRELWEYLAGVIPHYQKKYGIDGARLDMGHALPKELLDLIIKNVKEYDPAFV 410
Query: 313 FPSNHIMEGYAYILMHPGIPSVFYDHFYDWGDSIHNQIVKLMDVRRQQDIHS 364
+ + G + + + +I KL D+ + +
Sbjct: 411 MIAEELDMEKDKASKEAGYDVILGSSW--YFAGRVEEIGKLPDIAEELVLPF 460
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 416 | |||
| d1ht6a2 | 347 | Plant alpha-amylase {Barley (Hordeum vulgare), AMY | 100.0 | |
| d1gcya2 | 357 | G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase | 100.0 | |
| d1mxga2 | 361 | Bacterial alpha-amylase {Archaeon Pyrococcus woese | 100.0 | |
| d2aaaa2 | 381 | Fungal alpha-amylases {Aspergillus niger, acid amy | 100.0 | |
| d2guya2 | 381 | Fungal alpha-amylases {Aspergillus oryzae, Taka-am | 100.0 | |
| d1j0ha3 | 382 | Neopullulanase, central domain {Bacillus stearothe | 100.0 | |
| d1h3ga3 | 422 | Cyclomaltodextrinase, central domain {Flavobacteri | 100.0 | |
| d1ea9c3 | 382 | Maltogenic amylase, central domain {Bacillus sp., | 100.0 | |
| d1e43a2 | 393 | Bacterial alpha-amylase {Chimera (Bacillus amyloli | 100.0 | |
| d2d3na2 | 394 | Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: | 100.0 | |
| d1hvxa2 | 393 | Bacterial alpha-amylase {Bacillus stearothermophil | 100.0 | |
| d3bmva4 | 406 | Cyclodextrin glycosyltransferase {Thermoanaerobact | 100.0 | |
| d1wzla3 | 382 | Maltogenic amylase, central domain {Thermoactinomy | 100.0 | |
| d1qhoa4 | 407 | Cyclodextrin glycosyltransferase {Bacillus stearot | 100.0 | |
| d1lwha2 | 391 | 4-alpha-glucanotransferase {Thermotoga maritima [T | 100.0 | |
| d1wzaa2 | 409 | Bacterial alpha-amylase {Halothermothrix orenii [T | 100.0 | |
| d1ua7a2 | 344 | Bacterial alpha-amylase {Bacillus subtilis [TaxId: | 100.0 | |
| d1jaea2 | 378 | Animal alpha-amylase {Yellow mealworm (Tenebrio mo | 100.0 | |
| d2bhua3 | 420 | Glycosyltrehalose trehalohydrolase, central domain | 100.0 | |
| d1g94a2 | 354 | Bacterial alpha-amylase {Pseudoalteromonas halopla | 100.0 | |
| d1ji1a3 | 432 | Maltogenic amylase, central domain {Thermoactinomy | 100.0 | |
| d1eh9a3 | 400 | Glycosyltrehalose trehalohydrolase, central domain | 100.0 | |
| d1m53a2 | 478 | Isomaltulose synthase PalI {Klebsiella sp., lx3 [T | 100.0 | |
| d1hx0a2 | 403 | Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 982 | 100.0 | |
| d1uoka2 | 479 | Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 13 | 100.0 | |
| d1g5aa2 | 554 | Amylosucrase {Neisseria polysaccharea [TaxId: 489] | 100.0 | |
| d1bf2a3 | 475 | Isoamylase, central domain {Pseudomonas amyloderam | 100.0 | |
| d1ud2a2 | 390 | Bacterial alpha-amylase {Bacillus sp., ksm-k38 [Ta | 100.0 | |
| d1m7xa3 | 396 | 1,4-alpha-glucan branching enzyme, central domain | 100.0 | |
| d2fhfa5 | 563 | Pullulanase PulA {Klebsiella pneumoniae [TaxId: 57 | 100.0 | |
| d1r7aa2 | 434 | Sucrose phosphorylase {Bifidobacterium adolescenti | 100.0 | |
| d1gjwa2 | 572 | Maltosyltransferase {Thermotoga maritima [TaxId: 2 | 100.0 | |
| d1iv8a2 | 653 | Maltooligosyl trehalose synthase {Archaeon Sulfolo | 100.0 | |
| d1tz7a1 | 485 | Amylomaltase MalQ {Aquifex aeolicus [TaxId: 63363] | 98.06 | |
| d1x1na1 | 523 | Amylomaltase MalQ {Potato (Solanum tuberosum) [Tax | 98.0 | |
| d1ht6a1 | 57 | Plant alpha-amylase {Barley (Hordeum vulgare), AMY | 97.95 | |
| d1avaa1 | 57 | Plant alpha-amylase {Barley (Hordeum vulgare), see | 97.94 | |
| d1zy9a2 | 348 | Alpha-galactosidase GalA catalytic domain {Thermot | 97.87 | |
| d1wzla2 | 83 | Maltogenic amylase {Thermoactinomyces vulgaris, TV | 97.29 | |
| d2f2ha4 | 338 | Putative glucosidase YicI, domain 2 {Escherichia c | 97.23 | |
| d1eswa_ | 500 | Amylomaltase MalQ {Thermus aquaticus [TaxId: 271]} | 97.22 | |
| d1ji1a2 | 83 | Maltogenic amylase {Thermoactinomyces vulgaris, TV | 96.96 | |
| d1ea9c2 | 80 | Maltogenic amylase {Bacillus sp., cyclomaltodextri | 96.75 | |
| d1j0ha2 | 83 | Neopullulanase {Bacillus stearothermophilus [TaxId | 96.73 | |
| d1ecea_ | 358 | Endocellulase E1 {Acidothermus cellulolyticus [Tax | 96.44 | |
| d1uuqa_ | 410 | Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} | 96.4 | |
| d1x7fa2 | 244 | Outer surface protein, N-terminal domain {Bacillus | 96.18 | |
| d2c0ha1 | 350 | endo-1,4-beta-mannosidase {Blue mussel (Mytilus ed | 96.15 | |
| d1qnra_ | 344 | Beta-mannanase {Trichoderma reesei [TaxId: 51453]} | 96.14 | |
| d1cxla3 | 90 | Cyclodextrin glycosyltransferase {Bacillus circula | 96.02 | |
| d3bmva3 | 89 | Cyclodextrin glycosyltransferase {Thermoanaerobact | 95.86 | |
| d1cyga3 | 89 | Cyclodextrin glycosyltransferase {Bacillus stearot | 95.77 | |
| d1ceoa_ | 340 | Endoglucanase CelC {Clostridium thermocellum [TaxI | 95.69 | |
| d1rh9a1 | 370 | Beta-mannanase {Tomato (Lycopersicon esculentum) [ | 95.56 | |
| d1foba_ | 334 | Beta-1,4-galactanase {Fungus (Aspergillus aculeatu | 95.22 | |
| d1h4pa_ | 408 | Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharom | 95.2 | |
| d1ur4a_ | 387 | Beta-1,4-galactanase {Bacillus licheniformis [TaxI | 95.11 | |
| d1hjsa_ | 332 | Beta-1,4-galactanase {Thielavia heterothallica, ak | 95.0 | |
| d1wkya2 | 297 | Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 2449 | 94.85 | |
| d7a3ha_ | 300 | Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId | 94.78 | |
| d1edga_ | 380 | Endoglucanase CelA {Clostridium cellulolyticum [Ta | 94.74 | |
| d1bqca_ | 302 | Beta-mannanase {Thermomonospora fusca [TaxId: 2021 | 94.57 | |
| d1m53a1 | 78 | Isomaltulose synthase PalI {Klebsiella sp., lx3 [T | 94.56 | |
| d1uoka1 | 79 | Oligo-1,6-glucosidase {Bacillus cereus [TaxId: 139 | 94.48 | |
| d2pb1a1 | 394 | Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) | 94.41 | |
| d1g01a_ | 357 | Alkaline cellulase K catalytic domain {Bacillus sp | 94.1 | |
| d1kwga2 | 393 | A4 beta-galactosidase {Thermus thermophilus [TaxId | 94.0 | |
| d1vjza_ | 325 | Endoglucanase homologue TM1752 {Thermotoga maritim | 93.9 | |
| d1edta_ | 265 | Endo-beta-N-acetylglucosaminidase {Streptomyces pl | 93.57 | |
| d1egza_ | 291 | Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: | 93.55 | |
| d1h1na_ | 305 | Endocellulase EngI {Thermoascus aurantiacus [TaxId | 92.17 | |
| d2fhfa5 | 563 | Pullulanase PulA {Klebsiella pneumoniae [TaxId: 57 | 91.93 | |
| d1tvna1 | 293 | Endoglucanase Cel5a {Pseudoalteromonas haloplankti | 91.78 | |
| d2ebna_ | 285 | Endo-beta-N-acetylglucosaminidase {Flavobacterium | 90.56 | |
| d1qbaa3 | 443 | Bacterial chitobiase (beta-N-acetylhexosaminidase) | 90.45 | |
| d1h3ga2 | 83 | Cyclomaltodextrinase {Flavobacterium sp. 92 [TaxId | 90.01 | |
| d1iv8a2 | 653 | Maltooligosyl trehalose synthase {Archaeon Sulfolo | 89.79 | |
| d1jaka1 | 356 | beta-N-acetylhexosaminidase {Streptomyces plicatus | 89.17 | |
| d1yhta1 | 344 | Dispersin B, DspB {Actinobacillus actinomycetemcom | 89.09 | |
| d1m7xa2 | 106 | 1,4-alpha-glucan branching enzyme {Escherichia col | 89.02 | |
| d1nowa1 | 353 | beta-hexosaminidase B {Human (Homo sapiens) [TaxId | 88.89 | |
| d1eoka_ | 282 | Endo-beta-N-acetylglucosaminidase {Flavobacterium | 88.57 | |
| d1hx0a1 | 93 | Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 982 | 88.43 | |
| d1g5aa1 | 74 | Amylosucrase {Neisseria polysaccharea [TaxId: 489] | 88.03 | |
| d1jaea1 | 93 | Animal alpha-amylase {Yellow mealworm (Tenebrio mo | 85.96 | |
| d1hl9a2 | 350 | Putative alpha-L-fucosidase, catalytic domain {The | 85.58 | |
| d1g94a1 | 94 | Bacterial alpha-Amylase {Pseudoalteromonas halopla | 85.03 | |
| d1vema2 | 417 | Bacterial beta-amylase {Bacillus cereus [TaxId: 13 | 84.79 | |
| d1tg7a5 | 354 | Beta-galactosidase LacA, N-terminal domain {Penici | 84.72 | |
| d1ua7a1 | 78 | Bacterial alpha-Amylase {Bacillus subtilis [TaxId: | 84.27 | |
| d1r46a2 | 292 | Melibiase {Human (Homo sapiens) [TaxId: 9606]} | 83.69 | |
| d2gjxa1 | 362 | beta-hexosaminidase A {Human (Homo sapiens) [TaxId | 83.6 | |
| d1gjwa2 | 572 | Maltosyltransferase {Thermotoga maritima [TaxId: 2 | 83.48 | |
| d1uasa2 | 273 | Melibiase {Rice (Oryza sativa) [TaxId: 4530]} | 83.42 | |
| d1qwga_ | 251 | (2r)-phospho-3-sulfolactate synthase ComA {Archaeo | 81.48 | |
| d1bhga3 | 304 | beta-Glucuronidase, domain 3 {Human (Homo sapiens) | 80.7 |
| >d1ht6a2 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Plant alpha-amylase species: Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]
Probab=100.00 E-value=5e-66 Score=500.76 Aligned_cols=330 Identities=49% Similarity=1.016 Sum_probs=258.2
Q ss_pred eeEEEeeecCCCCC--CcHHHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCCC-CCCCHHHHHHHHHHHHHC
Q 014892 29 EILFQGFNWESCKH--DWWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNS-SYGSEHLLKALLHKMKQH 105 (416)
Q Consensus 29 ~~~~q~f~~~~~~~--G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~-~~Gt~~d~~~Lv~~aH~~ 105 (416)
+||+|+|.|+++++ |||+||++||||||+||||+||||||++++++|||+|.|||+|+| +|||+++|++||++||++
T Consensus 2 ~~~~~~f~~~~~~~~~g~~~~i~~kLdyl~~lGv~~i~L~Pi~~~~~~~gY~~~d~~~id~~~~G~~~~f~~lv~~~H~~ 81 (347)
T d1ht6a2 2 QVLFQGFNWESWKQSGGWYNMMMGKVDDIAAAGVTHVWLPPPSHSVSNEGYMPGRLYDIDASKYGNAAELKSLIGALHGK 81 (347)
T ss_dssp CCEEECCCTTGGGCTTCHHHHHHTTHHHHHHTTCCEEEECCCSCBSSTTSSSBCCTTCGGGCTTCCHHHHHHHHHHHHHT
T ss_pred eeEEeccccCcCCCCCCCHHHHHHhHHHHHHcCCCEEEECCCCcCCCCCCCCccCcCcCCcccCCCHHHHHHHHHHHhhc
Confidence 68999999987654 899999999999999999999999999999999999999999998 699999999999999999
Q ss_pred CCEEEEEEccccCcCCCCCCCCcccccCCCC----CCCCCCcee----cCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHH
Q 014892 106 KVRAMADIVINHRVGTTQGHGGKYNRYDGIP----LSWDEHAVT----SCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDI 177 (416)
Q Consensus 106 Gi~VilD~V~NH~~~~~~~~~~~~~~f~~~~----~~~~~~~~~----~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l 177 (416)
||+||||+|+||++..+++....+..+.+.. .++...... .+.+..........+..+||||++||+||+++
T Consensus 82 gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdln~~n~~v~~~l 161 (347)
T d1ht6a2 82 GVQAIADIVINHRCADYKDSRGIYCIFEGGTSDGRLDWGPHMICRDDTKYSDGTANLDTGADFAAAPDIDHLNDRVQREL 161 (347)
T ss_dssp TCEEEEEECCSBCCCSEECTTSCEEECCCSSSSSTTCCCGGGBCTTCTTTCCSCSCCCSSCCCTTSCBBCTTCHHHHHHH
T ss_pred ceEEeeeccccccCCCCcccccccccccCCCCCCCcCcCccccCCCcccccccccccccccccCCCCcccccchhhhhhh
Confidence 9999999999999999998765554443311 111111111 01111222334556788999999999999999
Q ss_pred HHHHHHHHHhcCCCeEEecccCCCcHHHHHHHHHhcCCceEEEcccCCCCC-CCCCCCCccchhhHhHhhhhcc---CCC
Q 014892 178 IAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGARPIFSVGEYWDSCNY-NSHGLDYNQDSHRQRIINWIDG---TGQ 253 (416)
Q Consensus 178 ~~~~~~w~~~~gvDGfRlD~a~~~~~~~~~~~~~~~~~~~~vgE~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~---~~~ 253 (416)
++++++|++++||||||+|+|++++.++|+.+++.+++.+.++|.+..... ......+........+..+... ...
T Consensus 162 ~~~~~~wi~~~gvDGfR~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (347)
T d1ht6a2 162 KEWLLWLKSDLGFDAWRLDFARGYSPEMAKVYIDGTSPSLAVAEVWDNMATGGDGKPNYDQDAHRQNLVNWVDKVGGAAS 241 (347)
T ss_dssp HHHHHHHHHHHCCCEEEETTGGGSCHHHHHHHHHHHCCSCEEECCCCCCCBCTTSSBCSCCHHHHHHHHHHHHHHTGGGS
T ss_pred hhhhhhhcccCCcceEEEechhhcChHHHHHHHHhcccccchhhhcchhhccccccchhhhhcchhhhhhhhhhhCCccc
Confidence 999999999999999999999999999999999999887888887655322 2223333332223333333222 223
Q ss_pred cccccCchhhHHHHHHhcCchhhhhhhcCCCCCccccccCcceecccCCCCCCCCCCCCCChhhHHHHHHHHhcCCCeeE
Q 014892 254 LSAAFDFTTKGILQEAVKGQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFPSNHIMEGYAYILMHPGIPS 333 (416)
Q Consensus 254 ~~~~fdf~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~fl~nHD~~R~~~~~~~~~~~~~~a~a~llt~pGiP~ 333 (416)
....+++.+...+..++.+....+..............|..+++|++|||++|+.+....+.+++++|++++||+|||||
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fl~nHD~~R~~s~~~~~~~~~~~a~a~llt~pGiP~ 321 (347)
T d1ht6a2 242 AGMVFDFTTKGILNAAVEGELWRLIDPQGKAPGVMGWWPAKAVTFVDNHDTGSTQAMWPFPSDKVMQGYAYILTHPGIPC 321 (347)
T ss_dssp SEEEECHHHHHHHHHHTTTCGGGGSCTTSSCSSHHHHCGGGEEEESCCTTTSTTTCSSCCCGGGHHHHHHHHHHSSSEEE
T ss_pred cchhhhcchhhHHHHhhccchHHHHHHhhhccccccCChhHeEEecCCCCccCcccccCCCHHHHHHHHHHHHHcCCceE
Confidence 45678888887777777666554444333222223345668899999999999999888788899999999999999999
Q ss_pred EecCCcCCCchhHHHHHHHHHHHHHhC
Q 014892 334 VFYDHFYDWGDSIHNQIVKLMDVRRQQ 360 (416)
Q Consensus 334 Iy~G~E~gw~~~l~~~~~~Li~lR~~~ 360 (416)
||||||++|+ +.+.|++|+++||++
T Consensus 322 IyyGD~~~~~--~~d~i~~l~~~r~~~ 346 (347)
T d1ht6a2 322 IFYDHFFNWG--FKDQIAALVAIRKRN 346 (347)
T ss_dssp EEHHHHHTSS--CHHHHHHHHHHHHHT
T ss_pred EEeCCCcCCC--chHHHHHHHHHHHhc
Confidence 9999999997 789999999999986
|
| >d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) species: Pseudomonas stutzeri [TaxId: 316]
Probab=100.00 E-value=2e-66 Score=507.10 Aligned_cols=329 Identities=29% Similarity=0.508 Sum_probs=244.4
Q ss_pred eeeeeccCceeEEEeeecCCCC---CCcHHHHHhhhhhHHHcCCCEEEeCCCCCCC----------CCCCcccccCCCCC
Q 014892 20 IRAVIRNGREILFQGFNWESCK---HDWWRNLERKVPDISKSGFTSVWLPPATHSF----------APEGYLPQNLYSLN 86 (416)
Q Consensus 20 ~~~~~~~~~~~~~q~f~~~~~~---~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~----------~~~GY~~~d~~~id 86 (416)
+..++++|++||+|+|+|++++ .|||++|++||||||+||||+|||||+++++ ++|||+|.|| +|+
T Consensus 8 ~~~~~~~g~~~~~~~f~w~~~~~~~~~~~~~i~~kl~yl~~lGv~aIwl~P~~~~~~~~~~~~~~~~~hgY~~~dy-~vd 86 (357)
T d1gcya2 8 NAVRYHGGDEIILQGFHWNVVREAPNDWYNILRQQAATIAADGFSAIWMPVPWRDFSSWSDGSKSGGGEGYFWHDF-NKN 86 (357)
T ss_dssp TCCCCGGGCCCEEECCCTTHHHHSTTTHHHHHHHHHHHHHHTTCSEEEECCCSCCCCCBC---CCBCCSSTTCSSS-CSC
T ss_pred CceeecCCCEEEEeeeecCCCCCCCCcHHHHHHHHHHHHHHcCCCEEEeCcCeeCCccCCCCCCCCCCCCcChhhc-ccC
Confidence 4578999999999999998754 3689999999999999999999999999875 5799999996 799
Q ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEccccCcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcC
Q 014892 87 SSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNI 166 (416)
Q Consensus 87 ~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl 166 (416)
|+|||++||++||++||++||+||||+|+||++..+++....+..+.+ .|..................+++..+|||
T Consensus 87 ~~~Gt~~df~~LV~~aH~~GI~VIlD~V~NH~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~dl 163 (357)
T d1gcya2 87 GRYGSDAQLRQAASALGGAGVKVLYDVVPNHMNRGYPDKEINLPAGQG---FWRNDCADPGNYPNDCDDGDRFIGGDADL 163 (357)
T ss_dssp SSSCCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTCSSCSCCCCSSSS---CBGGGSCCCSSSCBTTBSSCCSTTSTTBB
T ss_pred ccCCCHHHHHHHHHHHHhcCCeEEEEEeccccCCCCCccccccccCCC---ccccccCCCCCCCCCCCcccccccccccc
Confidence 999999999999999999999999999999999999877654433221 11111000000001111233456789999
Q ss_pred CCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcHHHHHHHHHhcCC-ceEEEcccCCCCCCCCCCCCccchhhHhHh
Q 014892 167 DHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGARP-IFSVGEYWDSCNYNSHGLDYNQDSHRQRII 245 (416)
Q Consensus 167 n~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~~~~~~~~~~~~~-~~~vgE~~~~~~~~~~~~~~~~~~~~~~l~ 245 (416)
|++||+|++++++++++|++++||||||+|+|++++.++|+++...+++ .+++||.|...+................+.
T Consensus 164 n~~np~v~~~~~~~~~~~~~~~giDGfR~Daa~~i~~~~~~~~~~~~~~~~~~~gE~~~~~~~~~~~~~~~~~~~~~~~~ 243 (357)
T d1gcya2 164 NTGHPQVYGMFRDEFTNLRSQYGAGGFRFDFVRGYAPERVNSWMTDSADNSFCVGELWKGPSEYPNWDWRNTASWQQIIK 243 (357)
T ss_dssp CTTSHHHHHHHHHHHHHHHHHSCEEEEEESCGGGSCHHHHHHHHHHHCTTSEEEECCCCCGGGSCTTSGGGGSCHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHhcCCCEEEEeehhcCCHHHHHHHHhhcCCCceeeeeeccCccchhhhhhhccchhhhhhH
Confidence 9999999999999999988899999999999999999999999888876 788999997632110000000011122233
Q ss_pred hhhccCCCcccccCchhhHHHHHHhcCchhhhhhhcCCCCCccccccCcceecccCCCCCCCCCCCC------CChhhHH
Q 014892 246 NWIDGTGQLSAAFDFTTKGILQEAVKGQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWP------FPSNHIM 319 (416)
Q Consensus 246 ~~~~~~~~~~~~fdf~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~fl~nHD~~R~~~~~~------~~~~~~~ 319 (416)
.+... ...+.+++.+...+......+ +...+.... ....+..+++|++|||++|+.+... .+.++++
T Consensus 244 ~~~~~--~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~--~~~~~~~~v~fl~NHD~~r~~~~~~~~~~~~~~~~~~~ 316 (357)
T d1gcya2 244 DWSDR--AKCPVFDFALKERMQNGSIAD---WKHGLNGNP--DPRWREVAVTFVDNHDTGYSPGQNGGQHHWALQDGLIR 316 (357)
T ss_dssp HHHHH--HTSCEECHHHHHHHHHSCGGG---GGGSGGGCS--SHHHHTTEEECSCCTTTSBCSSGGGBCCSSCCCGGGHH
T ss_pred hHhhh--ccccccchhhhhhhhhhhHHH---HHHHHhhCc--cccccceeEEeecCCCcccccccCCccccccCHHHHHH
Confidence 33322 134567777766655533222 222211110 1123457899999999999876432 2566899
Q ss_pred HHHHHHhcCCCeeEEecCCcCCCchhHHHHHHHHHHHHHhCc
Q 014892 320 EGYAYILMHPGIPSVFYDHFYDWGDSIHNQIVKLMDVRRQQD 361 (416)
Q Consensus 320 ~a~a~llt~pGiP~Iy~G~E~gw~~~l~~~~~~Li~lR~~~~ 361 (416)
+|++++||+||+|||||||||+|+ +.+.|++||+|||+++
T Consensus 317 la~alllt~pGiP~IyyGde~d~g--~~d~i~~li~iRk~~~ 356 (357)
T d1gcya2 317 QAYAYILTSPGTPVVYWDHMYDWG--YGDFIRQLIQVRRAAG 356 (357)
T ss_dssp HHHHHHHHSSSEEEEEHHHHHTSS--CHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhCCCccEEEcCCcccCC--ChHHHHHHHHHHHhCC
Confidence 999999999999999999999998 7899999999999975
|
| >d1mxga2 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeon Pyrococcus woesei [TaxId: 2262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Archaeon Pyrococcus woesei [TaxId: 2262]
Probab=100.00 E-value=6.3e-64 Score=491.43 Aligned_cols=325 Identities=24% Similarity=0.478 Sum_probs=252.2
Q ss_pred ceeEEEeeecCCCCCC-cHHHHHhhhhhHHHcCCCEEEeCCCCCCCC---CCCcccccCC---------CCCCCCCCHHH
Q 014892 28 REILFQGFNWESCKHD-WWRNLERKVPDISKSGFTSVWLPPATHSFA---PEGYLPQNLY---------SLNSSYGSEHL 94 (416)
Q Consensus 28 ~~~~~q~f~~~~~~~G-~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~---~~GY~~~d~~---------~id~~~Gt~~d 94 (416)
++||+|+|.|+++.+| +|+||++||||||+||||+||||||+++.+ +|||++.||| +|+|+|||++|
T Consensus 9 ~~~~~q~f~w~~~~~~~~~~gi~~kLdylk~LGv~~Iwl~Pv~~~~~~~~~~gY~~~dy~~~~~~~~~~~vd~~~Gt~~d 88 (361)
T d1mxga2 9 GGVIMQAFYWDVPGGGIWWDHIRSKIPEWYEAGISAIWLPPPSKGMSGGYSMGYDPYDYFDLGEYYQKGTVETRFGSKEE 88 (361)
T ss_dssp TCCEEECCCTTCCCSSCHHHHHHHHHHHHHHHTCCEEECCCCSEETTGGGCCSSSEEETTCSSCSCBTTBSSCSSCCHHH
T ss_pred CCEEEEeeecCCCCCCchHHHHHHHHHHHHhcCCCEEEeCcCeeCCCCCCCCCCCcccccccCccccccCCCCCCCCHHH
Confidence 4899999999998875 579999999999999999999999998654 7999999998 68999999999
Q ss_pred HHHHHHHHHHCCCEEEEEEccccCcCCCCCCCCc---c--cccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCC
Q 014892 95 LKALLHKMKQHKVRAMADIVINHRVGTTQGHGGK---Y--NRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHT 169 (416)
Q Consensus 95 ~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~---~--~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~ 169 (416)
|++||++||++||+||||+|+||++..+++.... + ..+............+.+..........+.+..+||+++.
T Consensus 89 ~~~LV~~aH~~GikVIlD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 168 (361)
T d1mxga2 89 LVRLIQTAHAYGIKVIADVVINHRAGGDLEWNPFVGDYTWTDFSKVASGKYTANYLDFHPNELHCCDEGTFGGFPDICHH 168 (361)
T ss_dssp HHHHHHHHHHTTCEEEEEECCSBCCCCEEEEETTTTEEEEEECTTCTTCCSCCCGGGBSSSSSCSCCSCCCTTSCBBCTT
T ss_pred HHHHHHHHHHCCCEEEEEeeeccccCCccccCCccccccccccccccCCCCCccccccCcccccccccccccCcccccCC
Confidence 9999999999999999999999999877643221 1 1111100000000011111112222334556789999999
Q ss_pred CHHHHHHHHHH---HHHHHHhcCCCeEEecccCCCcHHHHHHHHHhcCCceEEEcccCCCCCCCCCCCCccchhhHhHhh
Q 014892 170 QHFVRKDIIAW---LRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGARPIFSVGEYWDSCNYNSHGLDYNQDSHRQRIIN 246 (416)
Q Consensus 170 ~~~v~~~l~~~---~~~w~~~~gvDGfRlD~a~~~~~~~~~~~~~~~~~~~~vgE~~~~~~~~~~~~~~~~~~~~~~l~~ 246 (416)
++.++.++++. +.+|++++||||||+|+|++++.+||+++.+.++ .+++||+|+.. .+.+..
T Consensus 169 ~~~~~~~l~~~~~~~~~~~~~~giDGfR~Daa~~v~~~f~~~~~~~~~-~~~~gE~~~~~--------------~~~~~~ 233 (361)
T d1mxga2 169 KEWDQYWLWKSNESYAAYLRSIGFDGWRFDYVKGYGAWVVRDWLNWWG-GWAVGEYWDTN--------------VDALLS 233 (361)
T ss_dssp SHHHHHHHTSSTTSHHHHHHHTTCCEEEETTGGGSCHHHHHHHHHHHC-CCEEECCCCSC--------------HHHHHH
T ss_pred cchhHHHHHHHHHHHhhhhhhcCCcceeecchhhCCHHHHHHHHhhcC-CceecccccCC--------------HHHHhh
Confidence 99999999653 4456679999999999999999999999999987 57899999762 355666
Q ss_pred hhccCCCcccccCchhhHHHHHHhcC-chhhhhhhcCCCCCccccccCcceecccCCCCCCCCCCCCCChhhHHHHHHHH
Q 014892 247 WIDGTGQLSAAFDFTTKGILQEAVKG-QFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFPSNHIMEGYAYI 325 (416)
Q Consensus 247 ~~~~~~~~~~~fdf~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~fl~nHD~~R~~~~~~~~~~~~~~a~a~l 325 (416)
|.... ..++|||+++..+.+++.+ ....+...+..........|.++++|++|||++|+.+ .++|+|++
T Consensus 234 ~~~~~--~~~~~df~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fl~NHD~~R~~~--------~~~a~a~l 303 (361)
T d1mxga2 234 WAYES--GAKVFDFPLYYKMDEAFDNNNIPALVYALQNGQTVVSRDPFKAVTFVANHDTDIIWN--------KYPAYAFI 303 (361)
T ss_dssp HHHHH--TSEEECHHHHHHHHHHHTTTCHHHHHHHHHTTCSSTTTCTTTEEEESCCSSCCCCSC--------HHHHHHHH
T ss_pred hhhcc--CCccccchHHHHHHHHHhcCChHHHHHHHhhccccccCCHHHheeeCcccCCccccc--------HHHHHHHH
Confidence 65432 4578999999999999843 3344433333323334456678999999999999753 46899999
Q ss_pred hcCCCeeEEecCCcCCCchhHHHHHHHHHHHHHhCcccCCCCeEEEEecCCEEEEEE
Q 014892 326 LMHPGIPSVFYDHFYDWGDSIHNQIVKLMDVRRQQDIHSRSSIKILEAQSNLYSAII 382 (416)
Q Consensus 326 lt~pGiP~Iy~G~E~gw~~~l~~~~~~Li~lR~~~~~l~~G~~~~~~~~~~~~~~~R 382 (416)
||+||+|+||||+|.+|. ..+.+++|+++|++ ++.|..+.+..++++++|.|
T Consensus 304 lt~pGiP~iyYGd~~~~~--~~~~~~~l~~~~~~---~~~g~~~~~~~~~d~~~f~R 355 (361)
T d1mxga2 304 LTYEGQPVIFYRDFEEWL--NKDKLINLIWIHDH---LAGGSTTIVYYDNDELIFVR 355 (361)
T ss_dssp HHSSSEEEEEHHHHHTTS--CHHHHHHHHHHHHH---TCCSCEEEEEECSSEEEEEE
T ss_pred HcCCCccEEEeCCCcccC--CcHHHHHHHHHHHH---hcCCCeEEEEECCCEEEEEe
Confidence 999999999999999887 45667888888876 47899999999999999988
|
| >d2aaaa2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus niger, acid amylase [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Fungal alpha-amylases species: Aspergillus niger, acid amylase [TaxId: 5061]
Probab=100.00 E-value=4.8e-63 Score=488.62 Aligned_cols=325 Identities=18% Similarity=0.273 Sum_probs=246.2
Q ss_pred eeccCceeEEEeeecCCCC-----------------CCcHHHHHhhhhhHHHcCCCEEEeCCCCCCC--------CCCCc
Q 014892 23 VIRNGREILFQGFNWESCK-----------------HDWWRNLERKVPDISKSGFTSVWLPPATHSF--------APEGY 77 (416)
Q Consensus 23 ~~~~~~~~~~q~f~~~~~~-----------------~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~--------~~~GY 77 (416)
..|.. .+|||+|...+.. .|||+||++||||||+||||+|||+||+++. .+|||
T Consensus 4 ~~W~~-~~iY~i~~~~F~~~~~~~~~~~~~~~~~~~gG~~~g~~~kLdyL~~LGv~~I~L~Pi~~~~~~~~~~~~~~~gY 82 (381)
T d2aaaa2 4 ASWRT-QSIYFLLTDRFGRTDNSTTATCNTGNEIYCGGSWQGIIDHLDYIEGMGFTAIWISPITEQLPQDTADGEAYHGY 82 (381)
T ss_dssp HHHTT-CCEEECCHHHHCCTTCCSCCCCCGGGCSCCCCCHHHHHHTHHHHHTTTCCEEEECCCEEECCCCBTTBCSTTSC
T ss_pred hhhCC-CcEEEEEeCcccCCCCCCCCCCCCCcCCcCCcCHHHHHHHHHHHHHcCCCEEEeCCCccCCccCCCCCCCCccc
Confidence 34543 5899998864321 1899999999999999999999999999743 47999
Q ss_pred ccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccccCcCCCCCCCCcccccCC--CCCCCCCCc-eecCCCCC--C
Q 014892 78 LPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDG--IPLSWDEHA-VTSCTGGL--G 152 (416)
Q Consensus 78 ~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~--~~~~~~~~~-~~~~~~~~--~ 152 (416)
++.||++|+|+|||+++||+||++||++||+||+|+|+||++.++++....+..+.. ....+++.. ..++.+.. .
T Consensus 83 ~~~d~~~id~~~Gt~~~~k~lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (381)
T d2aaaa2 83 WQQKIYDVNSNFGTADNLKSLSDALHARGMYLMVDVVPDHMGYAGNGNDVDYSVFDPFDSSSYFHPYCLITDWDNLTMVE 162 (381)
T ss_dssp SEEEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEEECCSBCCBSSCGGGCCGGGSBSCCSGGGBCCCCBCCCTTCHHHHH
T ss_pred ccccccccccccCCHHHHHHHHHHHhhhhhcccccccccccccccCCccccccccCCcccccccCCCccccccccccccC
Confidence 999999999999999999999999999999999999999999998876554433321 001111111 01111100 0
Q ss_pred CCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcHHHHHHHHHhcCCceEEEcccCCCCCCCCC
Q 014892 153 NGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGARPIFSVGEYWDSCNYNSHG 232 (416)
Q Consensus 153 ~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~~~~~~~~~~~~~~~~vgE~~~~~~~~~~~ 232 (416)
.++.+..+..+||||+.||+||+++++++++|++++||||||+|+|++++++||+++.++. +.+++||+|...
T Consensus 163 ~~~~~~~~~~~pdln~~np~v~~~~~~~~~~~~~~~giDGfR~D~~~~~~~~f~~~~~~~~-~~~~igE~~~~~------ 235 (381)
T d2aaaa2 163 DCWEGDTIVSLPDLDTTETAVRTIWYDWVADLVSNYSVDGLRIDSVLEVQPDFFPGYNKAS-GVYCVGEIDNGN------ 235 (381)
T ss_dssp HSBEECSSSEECBBCTTSHHHHHHHHHHHHHHHHHHTCCEEEESCSTTSCGGGHHHHHHHH-TSEEEECCCCSC------
T ss_pred CCccCCccccCccccccchhhhhHHhhhhhhcccceeeeeeeecccccccHHHHHHHHhcc-cccccccccCCC------
Confidence 1122334567899999999999999999999999999999999999999999999987664 478999988752
Q ss_pred CCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHhcC---chhhhhhhcCCCCCccccccCcceecccCCCCCCCCC
Q 014892 233 LDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKG---QFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQA 309 (416)
Q Consensus 233 ~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~p~~~~~fl~nHD~~R~~~ 309 (416)
......+. ..+.+++|++++..+..++.+ ....+.+.+..... ....+...++|++|||++|+.+
T Consensus 236 --------~~~~~~~~---~~~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~fl~nHD~~R~~~ 303 (381)
T d2aaaa2 236 --------PASDCPYQ---KVLDGVLNYPIYWQLLYAFESSSGSISNLYNMIKSVAS-DCSDPTLLGNFIENHDNPRFAK 303 (381)
T ss_dssp --------HHHHGGGG---GTSSEEBCHHHHHHHHHHHSSTTSCHHHHHHHHHHHHH-HCSCGGGSEECSCCTTSCCGGG
T ss_pred --------chhhhccc---cccccccchhHHHHHHHHHhcCCccHHHHHHHHHhhhh-ccCCchhhccccccCCchhhhc
Confidence 12222221 236789999999998888733 22222222110000 0123446789999999999988
Q ss_pred CCCCChhhHHHHHHHHhcCCCeeEEecCCcCCC-------------------chhHHHHHHHHHHHHHhCcccCCCCe
Q 014892 310 HWPFPSNHIMEGYAYILMHPGIPSVFYDHFYDW-------------------GDSIHNQIVKLMDVRRQQDIHSRSSI 368 (416)
Q Consensus 310 ~~~~~~~~~~~a~a~llt~pGiP~Iy~G~E~gw-------------------~~~l~~~~~~Li~lR~~~~~l~~G~~ 368 (416)
... +.+++++|++++||+||+|+||||+|+|. +.+++++||+|++|||++|+|+.|-+
T Consensus 304 ~~~-~~~~~~~a~a~llt~pG~P~iy~G~E~g~~g~~~p~~r~~~~~~~~~~~~~l~~~i~~L~~lRk~~~al~~~~~ 380 (381)
T d2aaaa2 304 YTS-DYSQAKNVLSYIFLSDGIPIVYAGEEQHYAGGKVPYNREATWLSGYDTSAELYTWIATTNAIRKLAIAADSAYI 380 (381)
T ss_dssp TCC-CHHHHHHHHHHHHHSSSEEEEETTTTTTCCCCTTTTTCCCGGGGTTCTTCHHHHHHHHHHHHHHHHHHHCTTTT
T ss_pred ccC-CHHHHHHHHHHHHHcCCCcEeEcCcccCCCCCCCcccccccCcCCCccChHHHHHHHHHHHHHhhChhhcCCCC
Confidence 775 67789999999999999999999999862 34799999999999999999998853
|
| >d2guya2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus oryzae, Taka-amylase [TaxId: 5062]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Fungal alpha-amylases species: Aspergillus oryzae, Taka-amylase [TaxId: 5062]
Probab=100.00 E-value=2.2e-63 Score=490.97 Aligned_cols=324 Identities=20% Similarity=0.308 Sum_probs=247.7
Q ss_pred eeeeccCceeEEEeeecCCCC-----------------CCcHHHHHhhhhhHHHcCCCEEEeCCCCCCC--------CCC
Q 014892 21 RAVIRNGREILFQGFNWESCK-----------------HDWWRNLERKVPDISKSGFTSVWLPPATHSF--------APE 75 (416)
Q Consensus 21 ~~~~~~~~~~~~q~f~~~~~~-----------------~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~--------~~~ 75 (416)
+|.-|.. ++|||+|.+.+.. .|||+||++||||||+||||+||||||+++. ++|
T Consensus 2 ~p~~W~~-~~iY~i~~~~F~~~~~~~~~~~~~~~~~~~gGd~~gi~~~Ldyl~~LGv~~I~L~Pi~~~~~~~~~~~~~~~ 80 (381)
T d2guya2 2 TPADWRS-QSIYFLLTDRFARTDGSTTATCNTADQKYCGGTWQGIIDKLDYIQGMGFTAIWITPVTAQLPQTTAYGDAYH 80 (381)
T ss_dssp CHHHHTT-CCEEEECHHHHCBTTCCSSCCCCGGGTCCCCBCHHHHHHTHHHHHTTTCCEEEECCCEEECCCCBTTBCCTT
T ss_pred CCccccC-CeEEEEEcchhcCCCCCCCCCCCCccCccCCcCHHHHHHhHHHHHHCCCCEEEeCCCCCCCcccCCCCCCCC
Confidence 3444544 7899999975421 1899999999999999999999999999853 579
Q ss_pred CcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccccCcCCCCCCCCcccccCCC--CCCCCCCcee-cCCCCC-
Q 014892 76 GYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGI--PLSWDEHAVT-SCTGGL- 151 (416)
Q Consensus 76 GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~~--~~~~~~~~~~-~~~~~~- 151 (416)
||++.||++|+|+|||++|||+||++||++||+||||+|+||+|.++++....+..+... ...|++.... .+.+..
T Consensus 81 gY~~~d~~~vd~~~Gt~~dfk~lv~~~H~~Gi~VilD~V~NH~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (381)
T d2guya2 81 GYWQQDIYSLNENYGTADDLKALSSALHERGMYLMVDVVANHMGYDGAGSSVDYSVFKPFSSQDYFHPFCFIQNYEDQTQ 160 (381)
T ss_dssp SCSEEEEEEECTTSCCHHHHHHHHHHHHHTTCEEEEEECCSBCCEEBCGGGCCGGGSBSCCSGGGBCCSCBCCCTTCHHH
T ss_pred CcccccccccccCCCCHHHHHHHHHHHHhhccceeeeccccccccccCcccccccccCCCCcccceeccccccccccccc
Confidence 999999999999999999999999999999999999999999999998766555444320 0111111100 010000
Q ss_pred -CCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcHHHHHHHHHhcCCceEEEcccCCCCCCC
Q 014892 152 -GNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGARPIFSVGEYWDSCNYNS 230 (416)
Q Consensus 152 -~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~~~~~~~~~~~~~~~~vgE~~~~~~~~~ 230 (416)
.+++.+.....+|+||++||+||+++++++++|++++||||||+|+|++++.+||+++.+..+ .+++||+|...
T Consensus 161 ~~~~~~~~~~~~~~dln~~n~~v~~~~~~~~~~w~~~~giDGfR~D~~~~~~~~f~~~~~~~~~-~~~igE~~~~~---- 235 (381)
T d2guya2 161 VEDCWLGDNTVSLPDLDTTKDVVKNEWYDWVGSLVSNYSIDGLRIDTVKHVQKDFWPGYNKAAG-VYCIGEVLDGD---- 235 (381)
T ss_dssp HHHSBEECSSEEECBBCTTSHHHHHHHHHHHHHHHHHHTCCEEEETTGGGSCGGGHHHHHHHHT-SEEEECCCCSC----
T ss_pred cceeeccCCccccchhccccHHHHHHHHHHhhhccccccccceeeehHhhcCHHHHHhhhhcce-eeeeeeccccc----
Confidence 011222335678999999999999999999999989999999999999999999999988764 78999999752
Q ss_pred CCCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHhcCc---hhhhhhhcCCCCCcccccc--CcceecccCCCCC
Q 014892 231 HGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKGQ---FWRLRDAQGKPPGVMGWWP--SRAVTFLDNHDTG 305 (416)
Q Consensus 231 ~~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~p--~~~~~fl~nHD~~ 305 (416)
...+..+. ..+.+++++++...+..++.+. ...+.+.... .....| ...++|++|||++
T Consensus 236 ----------~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~f~enHD~~ 299 (381)
T d2guya2 236 ----------PAYTCPYQ---NVMDGVLNYPIYYPLLNAFKSTSGSMDDLYNMINT---VKSDCPDSTLLGTFVENHDNP 299 (381)
T ss_dssp ----------HHHHGGGG---GTSSEEBCHHHHHHHHHHHSSTTCCHHHHHHHHHH---HHHHSSCGGGSEECSCCTTSC
T ss_pred ----------Hhhhcccc---ccccceecchhHHHHHHHHhccCCchHHHHHHHHH---HHhhcCccccceeeccCcCcc
Confidence 12222222 2367889999999888887432 2222222110 001112 3567999999999
Q ss_pred CCCCCCCCChhhHHHHHHHHhcCCCeeEEecCCcCCC-------------------chhHHHHHHHHHHHHHhCcccCCC
Q 014892 306 STQAHWPFPSNHIMEGYAYILMHPGIPSVFYDHFYDW-------------------GDSIHNQIVKLMDVRRQQDIHSRS 366 (416)
Q Consensus 306 R~~~~~~~~~~~~~~a~a~llt~pGiP~Iy~G~E~gw-------------------~~~l~~~~~~Li~lR~~~~~l~~G 366 (416)
|+.+..+ +..+.++|++++||+||+|+||||+|+|- +.++.++||+|++|||+.++++.|
T Consensus 300 R~~s~~~-~~~~~~~a~~~l~t~pGiP~iy~G~E~g~~g~~~~~~r~~~~~~~~~~~~~l~~~i~~L~~lR~~~~~~~~~ 378 (381)
T d2guya2 300 RFASYTN-DIALAKNVAAFIILNDGIPIIYAGQEQHYAGGNDPANREATWLSGYPTDSELYKLIASANAIRNYAISKDTG 378 (381)
T ss_dssp CGGGTCC-CHHHHHHHHHHHHHSSSEEEEETTGGGTCCCCSTTTTCCCGGGGTCCTTSHHHHHHHHHHHHHHHHHHHCTT
T ss_pred ccccccC-CHHHHHHHHHHHHHcCCCcEEEcccccCcCCCCCcchhcccccccCcCCHHHHHHHHHHHHHHhHHhhccCC
Confidence 9998775 67789999999999999999999999752 347999999999999999888877
Q ss_pred C
Q 014892 367 S 367 (416)
Q Consensus 367 ~ 367 (416)
.
T Consensus 379 ~ 379 (381)
T d2guya2 379 F 379 (381)
T ss_dssp T
T ss_pred C
Confidence 4
|
| >d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Neopullulanase, central domain species: Bacillus stearothermophilus [TaxId: 1422]
Probab=100.00 E-value=3.9e-63 Score=488.48 Aligned_cols=325 Identities=16% Similarity=0.257 Sum_probs=244.8
Q ss_pred eeeccCceeEEEeeecCCCC------------------------CCcHHHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCc
Q 014892 22 AVIRNGREILFQGFNWESCK------------------------HDWWRNLERKVPDISKSGFTSVWLPPATHSFAPEGY 77 (416)
Q Consensus 22 ~~~~~~~~~~~q~f~~~~~~------------------------~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY 77 (416)
++-|-.+.||||++...+.. .|||+||++||||||+||||+||||||++++++|||
T Consensus 5 ~P~w~~~~viY~v~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~gi~~kldyl~~LGv~~i~L~Pi~~~~~~~gy 84 (382)
T d1j0ha3 5 APDWVKDTVWYQIFPERFANGNPSISPEGSRPWGSEDPTPTSFFGGDLQGIIDHLDYLVDLGITGIYLTPIFRSPSNHKY 84 (382)
T ss_dssp CCGGGGGCCEEEECGGGTCCSCGGGSCTTCCCTTSSCCCSSCCCCCCHHHHHHTHHHHHHHTCCEEEECCCEECSSSSCC
T ss_pred CCcchhCCEEEEEEcchhcCCCCCCCccccccccccCCccCccCCcCHHHHHHhHHHHHHcCCCEEEeCCCCcCCcccCC
Confidence 44555568999999975431 289999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccccCcCCCCCCCCcccccCC-CCCCCCCCc-eecCCCCCCCCC
Q 014892 78 LPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDG-IPLSWDEHA-VTSCTGGLGNGS 155 (416)
Q Consensus 78 ~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~-~~~~~~~~~-~~~~~~~~~~~~ 155 (416)
+|.||++|+|+|||+++|++||++||++||+||+|+|+||++.+|+++...+..... ...+|.... .....+......
T Consensus 85 ~~~d~~~vd~~~Gt~~~~~~lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (382)
T d1j0ha3 85 DTADYFEVDPHFGDKETLKTLIDRCHEKGIRVMLDAVFNHCGYEFAPFQDVWKNGESSKYKDWFHIHEFPLQTEPRPNYD 164 (382)
T ss_dssp SCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTCHHHHHHHHHGGGCTTGGGBCBSSSSCCCSSSCSBC
T ss_pred CcccccccCCCCCCHHHHHHHHHHhhhccceEEEEeeecccccccccchhhhccCCccccCCcccccccccccccccccc
Confidence 999999999999999999999999999999999999999999998754311100000 001111100 000001111112
Q ss_pred CCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcHHHHHHHHHhcC---C-ceEEEcccCCCCCCCC
Q 014892 156 TGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGAR---P-IFSVGEYWDSCNYNSH 231 (416)
Q Consensus 156 ~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~~~~~~~~~~~~---~-~~~vgE~~~~~~~~~~ 231 (416)
.......+|+||++||+||++|++++++|++++||||||+|+|++++.++++++.++++ | .+++||.|....
T Consensus 165 ~~~~~~~~~dln~~n~~vr~~l~~~~~~wi~~~giDGfR~Da~~~~~~~~~~~~~~~~~~~~p~~~~i~e~~~~~~---- 240 (382)
T d1j0ha3 165 TFAFVPQMPKLNTANPEVKRYLLDVATYWIREFDIDGWRLDVANEIDHEFWREFRQEVKALKPDVYILGEIWHDAM---- 240 (382)
T ss_dssp BSTTCTTSBBBCTTSHHHHHHHHHHHHHHHHHHCCCEEEETTGGGSCHHHHHHHHHHHHHHCTTCEEEECCSSCCG----
T ss_pred ccccCCCCcccccChHHHHHHHHHHHHhHhhhccccEEEecchhhcchhhhhhhhhhhhccCCCccccccccccch----
Confidence 23346789999999999999999999999999999999999999999999999987653 4 678999987521
Q ss_pred CCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHhcCch---hhhhhhcCCC-CCccccccCcceecccCCCCCCC
Q 014892 232 GLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKGQF---WRLRDAQGKP-PGVMGWWPSRAVTFLDNHDTGST 307 (416)
Q Consensus 232 ~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~~~~~---~~~~~~~~~~-~~~~~~~p~~~~~fl~nHD~~R~ 307 (416)
.++. ..+.++.+++++...+...+.+.. .......... .......+...++|++|||++|+
T Consensus 241 --------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~nHD~~R~ 305 (382)
T d1j0ha3 241 --------------PWLR-GDQFDAVMNYPFTDGVLRFFAKEEISARQFANQMMHVLHSYPNNVNEAAFNLLGSHDTSRI 305 (382)
T ss_dssp --------------GGCS-SSSCSEEBCHHHHHHHHHHHTSCCSCHHHHHHHHHHHHHTSCHHHHHTCBCBSCCTTSCCH
T ss_pred --------------hhhc-ccccccccccccchhhhhhhhcccccchhhhhhhhhcccccccccCccceeeccCCCCCcc
Confidence 1111 134678889988888888764431 1111110000 00011122356899999999998
Q ss_pred CCCCCCChhhHHHHHHHHhcCCCeeEEecCCcCC--------------C-----chhHHHHHHHHHHHHHhCcccCC
Q 014892 308 QAHWPFPSNHIMEGYAYILMHPGIPSVFYDHFYD--------------W-----GDSIHNQIVKLMDVRRQQDIHSR 365 (416)
Q Consensus 308 ~~~~~~~~~~~~~a~a~llt~pGiP~Iy~G~E~g--------------w-----~~~l~~~~~~Li~lR~~~~~l~~ 365 (416)
.+.+..+..++++|++++||+||+||||||+|+| | +.++++++|+|++|||++|+|++
T Consensus 306 ~~~~~~~~~~~~~a~~lllt~pG~P~iy~G~E~G~~~~~~~~~r~~~~W~~~~~~~~l~~~~k~L~~lR~~~paL~r 382 (382)
T d1j0ha3 306 LTVCGGDIRKVKLLFLFQLTFTGSPCIYYGDEIGMTGGNDPECRKCMVWDPMQQNKELHQHVKQLIALRKQYRSLRR 382 (382)
T ss_dssp HHHTTTCHHHHHHHHHHHHHSSSCCEEETTGGGTCCCCSTTGGGCCCCCCTTTSCHHHHHHHHHHHHHHHHCHHHHH
T ss_pred ccccCChHHHHHHHHHHHHHcCCCCEEEcChhhCcCCCCCcccccCCCCCccccChHHHHHHHHHHHHHhcCHHhCc
Confidence 8877767778999999999999999999999986 3 24899999999999999999863
|
| >d1h3ga3 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central domain {Flavobacterium sp. 92 [TaxId: 197856]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Cyclomaltodextrinase, central domain species: Flavobacterium sp. 92 [TaxId: 197856]
Probab=100.00 E-value=6.5e-63 Score=493.02 Aligned_cols=327 Identities=18% Similarity=0.266 Sum_probs=244.2
Q ss_pred eeeccCceeEEEeeecCCC------------------------CCCcHHHHHhhhhhHHHcCCCEEEeCCCCCCC----C
Q 014892 22 AVIRNGREILFQGFNWESC------------------------KHDWWRNLERKVPDISKSGFTSVWLPPATHSF----A 73 (416)
Q Consensus 22 ~~~~~~~~~~~q~f~~~~~------------------------~~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~----~ 73 (416)
..|+++ +||||+|...+. ..|||+||++||||||+||||+||||||++++ +
T Consensus 6 ~~~~~~-~viY~i~~~~F~~gd~~nd~~~~~~~~~~~~~~~~~~gGd~~Gl~~kLdyl~~LGv~~I~l~Pi~~~~~~~~~ 84 (422)
T d1h3ga3 6 QGFGPG-DAIYQIMPDRFANGDPSNDNVAGMREQADRRHGGGRHGGDIRGTIDHLDYIAGLGFTQLWPTPLVENDAAAYS 84 (422)
T ss_dssp CCCCTT-CCEEEECHHHHCCSCGGGSSCTTCSSCCCTTSTTSCCCCCHHHHHHTHHHHHHHTCCEEEECCCEECCCSSCG
T ss_pred CCCCCC-CcEEEeChhhccCCCCCcCccCCccccccccccCCCCCcCHHHHHHhHHHHHHCCCCEEEeCCcccCCCCCCC
Confidence 346666 899999997442 11899999999999999999999999999765 4
Q ss_pred CCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccccCcCCCCCCCCcc----cccCCCCCCCCCCceecCCC
Q 014892 74 PEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKY----NRYDGIPLSWDEHAVTSCTG 149 (416)
Q Consensus 74 ~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~----~~f~~~~~~~~~~~~~~~~~ 149 (416)
+|||+|.||++|+|+|||++|||+||++||++||+||+|+|+||++.+|+|+.... ..+..... ..........+
T Consensus 85 ~~GY~~~d~~~vd~~~Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 163 (422)
T d1h3ga3 85 YHGYAATDHYRIDPRYGSNEDFVRLSTEARKRGMGLIQDVVLSHIGKHHWWMKDLPTPDWINYGGKFV-PTQHHRVAVQD 163 (422)
T ss_dssp GGCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTSGGGGSCSSTTSBSCCSSCC-BCCCCGGGGSC
T ss_pred CCCCCccccCCcccccCCHHHHHHHHHHHHHhCccccccCccccccccchhhcccccccccccccccc-ccccccccccc
Confidence 78999999999999999999999999999999999999999999999998754321 11110000 00000000001
Q ss_pred CCCC------CCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcHHHHHHHHHhcC---C-ceEE
Q 014892 150 GLGN------GSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGAR---P-IFSV 219 (416)
Q Consensus 150 ~~~~------~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~~~~~~~~~~~~---~-~~~v 219 (416)
.+.. .........+|+||++||+||++|++++++|++++||||||+|+|++++.+||+++...++ | .+++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~dln~~n~~vr~~~~~~~~~w~~~~gvDGfR~Da~~~~~~~f~~~~~~~~~~~~~~~~~i 243 (422)
T d1h3ga3 164 PYAAQADSENFTKGWFVEGMPDLNQTNPLVANYLIQNNIWWIEYAGLSGLRIDTYGYSDGAFLTEYTRRLMAEYPRLNMV 243 (422)
T ss_dssp TTCCHHHHHHHHHSBSSTTSCBBCTTSHHHHHHHHHHHHHHHHHHTCSEEEETTGGGSCHHHHHHHHHHHHHHCTTCEEE
T ss_pred cccccCcccceeecccccCccccccccHHHHHHHhhhHHHHhhheeeeeeeecccccccchhhhhhhhhhhhccccceEE
Confidence 1100 0112245789999999999999999999999988999999999999999999999987753 3 7899
Q ss_pred EcccCCCCCCCCCCCCccchhhHhHhhhhc-------cCCCcccccCchhhHHHHHHhcC--c---hhhhhhhcCCCCCc
Q 014892 220 GEYWDSCNYNSHGLDYNQDSHRQRIINWID-------GTGQLSAAFDFTTKGILQEAVKG--Q---FWRLRDAQGKPPGV 287 (416)
Q Consensus 220 gE~~~~~~~~~~~~~~~~~~~~~~l~~~~~-------~~~~~~~~fdf~~~~~l~~~~~~--~---~~~~~~~~~~~~~~ 287 (416)
||.|.... ..+..+.. ....+.++++|.+...+..++.. . ...+...+.. ..
T Consensus 244 ~E~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 307 (422)
T d1h3ga3 244 GEEWSTRV--------------PVVARWQRGKANFDGYTSHLPSLMDFPLVDAMRNALSKTGEENGLNEVYETLSL--DY 307 (422)
T ss_dssp ECCCCSCH--------------HHHHTTSTTCCCTTCCCCCCCEEBCHHHHHHHHHHHHCTTCSSTTHHHHHHHHG--GG
T ss_pred eeccccch--------------hhhhhhccccccccccccchhhhhhhhHHHHHHHHHhhccccchhHHHHHHHhh--hc
Confidence 99997521 11222211 11245678899888888887622 1 1122222110 00
Q ss_pred cccccCcceecccCCCCCCCCCCCCCChhhHHHHHHHHhcCCCeeEEecCCcCC--------------------Cc----
Q 014892 288 MGWWPSRAVTFLDNHDTGSTQAHWPFPSNHIMEGYAYILMHPGIPSVFYDHFYD--------------------WG---- 343 (416)
Q Consensus 288 ~~~~p~~~~~fl~nHD~~R~~~~~~~~~~~~~~a~a~llt~pGiP~Iy~G~E~g--------------------w~---- 343 (416)
....+...++|++|||++|+.+.+.....+.++|++++||+||+||||||||+| |.
T Consensus 308 ~~~~~~~~~~f~~nHD~~R~~~~~~~~~~~~~~a~~~llt~pG~P~iy~G~E~G~~~~~~~~~d~~~r~~~p~~w~~~~~ 387 (422)
T d1h3ga3 308 LYPEPQNLVLFGGNHDMARMFSAAGEDFDRWRMNLVFLMTMPRIPQFYSGDEILMTSTVKGRDDASYRRDFPGGWAGDKA 387 (422)
T ss_dssp GSSSGGGSEEESCCTTSCCHHHHTTSCHHHHHHHHHHHHHSSSEEEEETTGGGTCCCCCSSSCGGGGSCCCTTSSTTCSS
T ss_pred ccccccceeeeecccccccccccccccHHHHHHHHHHHHHcCCCcEEEcChhhCCcCCCCCCCCcchhccCccccCcccc
Confidence 111234678999999999998887767778999999999999999999999986 21
Q ss_pred ------------hhHHHHHHHHHHHHHhCcccCCC
Q 014892 344 ------------DSIHNQIVKLMDVRRQQDIHSRS 366 (416)
Q Consensus 344 ------------~~l~~~~~~Li~lR~~~~~l~~G 366 (416)
.++++++|+|++|||++|+|++|
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~L~~lR~~~paL~~G 422 (422)
T d1h3ga3 388 NAFSGAGLTSQQRAAQDLVRKLANWRKNQPVIHNG 422 (422)
T ss_dssp CTTTCTTCCHHHHHHHHHHHHHHHHHTTCHHHHHC
T ss_pred cCcCccccchhHHHHHHHHHHHHHHHhcCHHhhCC
Confidence 25899999999999999999876
|
| >d1ea9c3 c.1.8.1 (C:122-503) Maltogenic amylase, central domain {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltogenic amylase, central domain species: Bacillus sp., cyclomaltodextrinase [TaxId: 1409]
Probab=100.00 E-value=1.5e-62 Score=483.86 Aligned_cols=326 Identities=16% Similarity=0.252 Sum_probs=244.6
Q ss_pred eeeccCceeEEEeeecCCCC------------------------CCcHHHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCc
Q 014892 22 AVIRNGREILFQGFNWESCK------------------------HDWWRNLERKVPDISKSGFTSVWLPPATHSFAPEGY 77 (416)
Q Consensus 22 ~~~~~~~~~~~q~f~~~~~~------------------------~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY 77 (416)
|+-|-.++||||++...+.. .|||+||++||||||+||||+||||||+++.++|||
T Consensus 3 ~p~W~~~~v~Y~i~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~Gd~~gi~~kLdylk~LGv~~i~l~Pi~~~~~~~gY 82 (382)
T d1ea9c3 3 PPAWVKDAIFYQIFPERFANGDTRNDPEGTLPWGSADPTPSCFFGGDLQGVIDHLDHLSKLGVNAVYFTPLFKATTNHKY 82 (382)
T ss_dssp CCTHHHHCCCCEECSTTSCCCCSCSCSSCCSCCCSSSCCCSSCCCCCHHHHHHTHHHHHHHTCSEEEECCCSSCSSSSTT
T ss_pred CCccccCCeEEEEEcchhcCCCCCCCccCcccccccCCCcCccCCcCHHHHHHhhHHHHhCCCCEEEeCCCccCCCCCCC
Confidence 44444558999999875531 389999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccccCcCCCCCCCCcccccCC-CCCCCCCC--ceecCCCCCCCC
Q 014892 78 LPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDG-IPLSWDEH--AVTSCTGGLGNG 154 (416)
Q Consensus 78 ~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~-~~~~~~~~--~~~~~~~~~~~~ 154 (416)
+|.||++|+|+|||++|||+||++||++||+||+|+|+||++.++++.......... ...+|... ......++....
T Consensus 83 ~~~~~~~id~~~Gt~~df~~lv~~~h~~gi~VilD~V~NH~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (382)
T d1ea9c3 83 DTEDYFQIDPQFGDKDTLKKLVDLCHERGIRVLLDAVFNHSGRTFPPFVDVLKNGEKSKYKDWFHIRSLPLEVVDGIPTY 162 (382)
T ss_dssp SCSCTTCCCTTTCCHHHHHHHHHHHTTTTCEEEEECCCSBCCTTTHHHHHHHTTTTTCTTTTSSCBCSSSCCCTTSCCSB
T ss_pred CcccccccccccCCHHHHHHHHHHHHhhcceEEEeeecccccccCcchhhhhhcCCcccccccccccccccccccCcccc
Confidence 999999999999999999999999999999999999999999999753211100000 00111100 000011111111
Q ss_pred CCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcHHHHHHHHHhcC---C-ceEEEcccCCCCCCC
Q 014892 155 STGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGAR---P-IFSVGEYWDSCNYNS 230 (416)
Q Consensus 155 ~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~~~~~~~~~~~~---~-~~~vgE~~~~~~~~~ 230 (416)
........+|++|++||+|++++++++++|++++||||||+|+|++++.++|+++..+++ | .+++||.|.....
T Consensus 163 ~~~~~~~~~~d~n~~~~~v~~~l~~~~~~w~~~~gvDGfR~Da~~~~~~~~~~~~~~~~~~~~p~~~~~~e~~~~~~~-- 240 (382)
T d1ea9c3 163 DTFAFEPLMPKLNTEHPDVKEYLLKAAEYWIRETGIDGWRLDVANEVSHQFWREFRRVVKQANPDAYILGEVWHESSI-- 240 (382)
T ss_dssp CBSSSCTTSBBCCTTSHHHHHHHHHHHHHHHHHHCCSEEEETTCTTSCHHHHHHHHHHHHHHCTTCEEEECCCSCCTT--
T ss_pred cccccccccCccccccHHHHHHHHHHHhhcccceeeeEEEecchhhCchhhhhhhhhhhhhcCCCeeEEeeecccccc--
Confidence 112234678999999999999999999999999999999999999999999998887654 4 7899998875311
Q ss_pred CCCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHhcCc---hhhhhhhcCCCC-CccccccCcceecccCCCCCC
Q 014892 231 HGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKGQ---FWRLRDAQGKPP-GVMGWWPSRAVTFLDNHDTGS 306 (416)
Q Consensus 231 ~~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~~~~---~~~~~~~~~~~~-~~~~~~p~~~~~fl~nHD~~R 306 (416)
++. ..+..+.+++++...+.+++.+. ............ ......+...++|++|||+.|
T Consensus 241 ----------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nHD~~r 303 (382)
T d1ea9c3 241 ----------------WLE-GDQFDAVMNYPFTNAVLDFFIHQIADAEKFSFMLGKQLAGYPRQASEVMFNLLDSHDTAR 303 (382)
T ss_dssp ----------------TTT-TTSCSEEBCHHHHHHHHHHTTSCCSCHHHHHHHHHHTTTTSCHHHHHTCEECSCCTTSCC
T ss_pred ----------------ccc-CccccccccccchhhhHhhhhccccchhHHHHHHHHHHHhchhhcccceeeeeccCcccc
Confidence 111 12456778888888888876432 222222111100 111112236789999999999
Q ss_pred CCCCCCCChhhHHHHHHHHhcCCCeeEEecCCcCC--------------C-----chhHHHHHHHHHHHHHhCcccCCC
Q 014892 307 TQAHWPFPSNHIMEGYAYILMHPGIPSVFYDHFYD--------------W-----GDSIHNQIVKLMDVRRQQDIHSRS 366 (416)
Q Consensus 307 ~~~~~~~~~~~~~~a~a~llt~pGiP~Iy~G~E~g--------------w-----~~~l~~~~~~Li~lR~~~~~l~~G 366 (416)
+.+....+..++++|++++||+||+||||||||+| | +.+++++||+|++|||++|+|+.|
T Consensus 304 ~~~~~~~~~~~~~~a~~~~l~~pG~P~Iy~G~E~g~~~~~~~~~r~~~~w~~~~~~~~l~~~~~~L~~lR~~~paL~~G 382 (382)
T d1ea9c3 304 LLTQADGDKRKMKLAVLFQFTYFGTPCIYYGDEVGLDGGHDPGCRKCMEWDETKHDKDLFAFYQTVIRLRQAHAALRTG 382 (382)
T ss_dssp HHHHHCSCHHHHHHHHHHHTTSSSEECCCSSCSSCCCCCSHHHHTCCCCCCTTSCCHHHHHHHHHHHHHHHHCSHHHHC
T ss_pred cccccCCHHHHHHHHHHHHHHcCCCCEEEccHhhCCCCCCCCCccCCCCCCCCcchHHHHHHHHHHHHHHhcCHHhcCC
Confidence 88777667778999999999999999999999986 3 247999999999999999999876
|
| >d1e43a2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]
Probab=100.00 E-value=1.2e-61 Score=480.29 Aligned_cols=316 Identities=25% Similarity=0.514 Sum_probs=239.4
Q ss_pred ceeEEEeeecCCCCC-CcHHHHHhhhhhHHHcCCCEEEeCCCCCCC--CCCCcccccCCC---------CCCCCCCHHHH
Q 014892 28 REILFQGFNWESCKH-DWWRNLERKVPDISKSGFTSVWLPPATHSF--APEGYLPQNLYS---------LNSSYGSEHLL 95 (416)
Q Consensus 28 ~~~~~q~f~~~~~~~-G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~--~~~GY~~~d~~~---------id~~~Gt~~d~ 95 (416)
.+||+|+|+|+++.+ |+|+||++||||||+||||+||||||+++. ++|||++.|+|. |||+|||++||
T Consensus 2 ~~~~~~~f~w~~~~~gg~~~gi~~kLdylk~LGvtaI~L~Pi~~~~~~~~~gy~~~~~Y~~~~~~~~~~vd~~~Gt~~df 81 (393)
T d1e43a2 2 NGTLMQYFEWYTPNDGQHWKRLQNDAEHLSDIGITAVWIPPAYKGLSQSDNGYGPYDLYDLGEFQQKGTVRTKYGTKSEL 81 (393)
T ss_dssp CCCEEECCCTTCCSSSCHHHHHHHHHHHHHHHTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCHHHH
T ss_pred CccEEEeEecCCCCCCCCHHHHHHHHHHHHHcCCCEEEeCcCccCCCCCCCCCCcccCcccccccccCccCCCCCCHHHH
Confidence 379999999998765 699999999999999999999999999874 478888888774 79999999999
Q ss_pred HHHHHHHHHCCCEEEEEEccccCcCCCCCCCC----------------c-----ccccCC--C-----C----------C
Q 014892 96 KALLHKMKQHKVRAMADIVINHRVGTTQGHGG----------------K-----YNRYDG--I-----P----------L 137 (416)
Q Consensus 96 ~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~----------------~-----~~~f~~--~-----~----------~ 137 (416)
++||++||++||+||||+|+||++..+++... . |..+.. . . .
T Consensus 82 ~~Lv~~~H~~Gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (393)
T d1e43a2 82 QDAIGSLHSRNVQVYGDVVLNHKAGADATEDVTAVEVNPANRNQETSEEYQIKAWTDFRFPGRGNTYSDFKWHWYHFDGA 161 (393)
T ss_dssp HHHHHHHHHTTCEEEEEECCSEECCCSEEEEEEEEEEETTEEEEECSCCEEEEEEEEBCCTTTTTSSCCCCBCGGGEEEE
T ss_pred HHHHHHHHHcCCEEEEEEeeccccCCCccccccccccCccccccccccccccccccccccCCCCCCCcccccccccCCCC
Confidence 99999999999999999999999998864210 0 000100 0 0 0
Q ss_pred CCCCC----ceecCC-CC--CC----CCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcHHHH
Q 014892 138 SWDEH----AVTSCT-GG--LG----NGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYV 206 (416)
Q Consensus 138 ~~~~~----~~~~~~-~~--~~----~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~~~~ 206 (416)
+|... ....+. ++ +. .......+..+||||++||+|++++++++++|++++||||||+|+|++++.+||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdln~~np~v~~~~~~~~~~w~~~~GiDGfR~Da~~~~~~~f~ 241 (393)
T d1e43a2 162 DWDESRKISRIFKFRGEGKAWDWEVSSENGNYDYLMYADVDYDHPDVVAETKKWGIWYANELSLDGFRIDAAKHIKFSFL 241 (393)
T ss_dssp SCBTTTTBCCEEEECSSSCCCCSSSCCTTSCCCCCSSEEECTTCHHHHHHHHHHHHHHHHHHTCCEEEETTGGGSCHHHH
T ss_pred CccccCCcCCcccccCcccccccccccccceeccccccccccCChhhhHHHHHHHHhhhhhcCcceEEeeccccCCHHHH
Confidence 11110 000000 00 00 011233457899999999999999999999999899999999999999999999
Q ss_pred HHHHHhcC-----CceEEEcccCCCCCCCCCCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHhc-Cchhhhhhh
Q 014892 207 KEYIEGAR-----PIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVK-GQFWRLRDA 280 (416)
Q Consensus 207 ~~~~~~~~-----~~~~vgE~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~~-~~~~~~~~~ 280 (416)
++++++++ +.+++||.|... ...+..|....+...++|||++...+..++. +....+.+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~gE~~~~~--------------~~~~~~~~~~~~~~~~~~d~~l~~~~~~a~~~~~~~~l~~~ 307 (393)
T d1e43a2 242 RDWVQAVRQATGKEMFTVAEYWQNN--------------AGKLENYLNKTSFNQSVFDVPLHFNLQAASSQGGGYDMRKL 307 (393)
T ss_dssp HHHHHHHHHHHCSCCEEEECCCCSC--------------HHHHHHHHHHTTTCSEEECHHHHHHHHHHHHTTTCSCGGGT
T ss_pred HHHHHHHHHhcCcceEEeeeecCCc--------------HHhhhhhhhccccceeeechHHHHHHHHHHhccchHHHHHH
Confidence 99887753 378899999762 3556666666566778899999988888873 333344443
Q ss_pred cCCCCCccccccCcceecccCCCCCCCCCCCCC-ChhhHHHHHHHHhc-CCCeeEEecCCcCCCc-------hhHHHHHH
Q 014892 281 QGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPF-PSNHIMEGYAYILM-HPGIPSVFYDHFYDWG-------DSIHNQIV 351 (416)
Q Consensus 281 ~~~~~~~~~~~p~~~~~fl~nHD~~R~~~~~~~-~~~~~~~a~a~llt-~pGiP~Iy~G~E~gw~-------~~l~~~~~ 351 (416)
+... .....|.++++|++|||++|+.+.... ...+.++|++++|+ +||+||||||||+|.. ..+...|+
T Consensus 308 ~~~~--~~~~~~~~~v~fl~nHD~~R~~~~~~~~~~~~~~la~a~ll~~~pG~P~IyyGdE~G~~g~~~~~~~~~~~~i~ 385 (393)
T d1e43a2 308 LNGT--VVSKHPLKSVTFVDNHDTQPGQSLESTVQTWFKPLAYAFILTRESGYPQVFYGDMYGTKGDSQREIPALKHKIE 385 (393)
T ss_dssp TTTC--STTTCGGGEEEESCCTTTSTTSTTCCCCCTTTHHHHHHHHHHSSSSEEEEEHHHHHCCCCSSTTCCCCCHHHHH
T ss_pred Hhhc--ccccCccceeEeccCCCCcccccccCchhHHHHHHHHHHHHHcCCCcEEEEhhHhcCCCCCCCCCcHHHHHHHH
Confidence 3321 123456688999999999999876543 33456678887775 5999999999999974 25788999
Q ss_pred HHHHHHHh
Q 014892 352 KLMDVRRQ 359 (416)
Q Consensus 352 ~Li~lR~~ 359 (416)
.|+++||+
T Consensus 386 ~l~~~rk~ 393 (393)
T d1e43a2 386 PILKARKQ 393 (393)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhCc
Confidence 99999996
|
| >d2d3na2 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 1416]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus sp. 707 [TaxId: 1416]
Probab=100.00 E-value=1.3e-61 Score=479.91 Aligned_cols=318 Identities=26% Similarity=0.511 Sum_probs=239.8
Q ss_pred ceeEEEeeecCCCCCC-cHHHHHhhhhhHHHcCCCEEEeCCCCCCC--CCCCcccccCC---------CCCCCCCCHHHH
Q 014892 28 REILFQGFNWESCKHD-WWRNLERKVPDISKSGFTSVWLPPATHSF--APEGYLPQNLY---------SLNSSYGSEHLL 95 (416)
Q Consensus 28 ~~~~~q~f~~~~~~~G-~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~--~~~GY~~~d~~---------~id~~~Gt~~d~ 95 (416)
.+||+|+|+|+.+++| +|++|++||||||+||||+|||+||+++. ..+||++.|+| +|+|+|||++||
T Consensus 2 ~~~~~q~f~w~~~~~g~~~~~i~~kLdyL~~LGv~aIwL~Pi~~~~~~~~~gY~~~~~yd~~~~~~~~~vd~~~Gt~~df 81 (394)
T d2d3na2 2 NGTMMQYFEWYLPNDGNHWNRLNSDASNLKSKGITAVWIPPAWKGASQNDVGYGAYDLYDLGEFNQKGTVRTKYGTRSQL 81 (394)
T ss_dssp CCCEEECCCTTCCSSSCHHHHHHHHHHHHHHHTCCEEEECCCSEESSTTCCSCSEEETTCSSCSCBTTBSSBTTBCHHHH
T ss_pred CccEEEEEecccCCCCCcHHHHHHHHHHHHHcCCCEEEECcCccCCCCCCCCCCcccCcccccccccCCcCCCCCCHHHH
Confidence 4899999999999876 78999999999999999999999999774 47788888876 599999999999
Q ss_pred HHHHHHHHHCCCEEEEEEccccCcCCCCCCC----------------Cc-----ccccCCC-----------------CC
Q 014892 96 KALLHKMKQHKVRAMADIVINHRVGTTQGHG----------------GK-----YNRYDGI-----------------PL 137 (416)
Q Consensus 96 ~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~----------------~~-----~~~f~~~-----------------~~ 137 (416)
++||++||++|||||+|+|+||++..+++.. +. |..+... ..
T Consensus 82 ~~Lv~~aH~~GIkVilDvV~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (394)
T d2d3na2 82 QAAVTSLKNNGIQVYGDVVMNHKGGADATEMVRAVEVNPNNRNQEVTGEYTIEAWTRFDFPGRGNTHSSFKWRWYHFDGV 161 (394)
T ss_dssp HHHHHHHHHTTCEEEEEECCSEECSCSEEEEEEEEEEETTEEEEECSCCEEEEEEEEBCCTTTTTSSCCCCBCGGGEEEE
T ss_pred HHHHHHHHHCCCEEEEEEecccccCccccccccccccCcccccccccccccccccccccCccccCCCCccccccccCCCc
Confidence 9999999999999999999999997664210 00 0001100 00
Q ss_pred CCCCCc-----eecC-CCC--CC----CCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcHHH
Q 014892 138 SWDEHA-----VTSC-TGG--LG----NGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKY 205 (416)
Q Consensus 138 ~~~~~~-----~~~~-~~~--~~----~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~~~ 205 (416)
+|.... .+.+ ..+ +. .....+.+..+||||++||+||+++++++++|++++||||||+|+|++++.+|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~np~V~~~~~~~~~~w~~~~giDGfR~D~a~~~~~~~ 241 (394)
T d2d3na2 162 DWDQSRRLNNRIYKFRGHGKAWDWEVDTENGNYDYLMYADIDMDHPEVVNELRNWGVWYTNTLGLDGFRIDAVKHIKYSF 241 (394)
T ss_dssp SCCTTTCCSSCEEEECSTTCCCCSSCCCTTSCCCCCSSEEECTTCHHHHHHHHHHHHHHHHHHTCSEEEETTGGGSCHHH
T ss_pred ccccccCCCCCcceecCCCCccccccccccccccccCCcccccCCHHHHHHHHHhhhhhhcccCcceEEecccccCChHH
Confidence 111100 0000 000 00 11223456789999999999999999999999988999999999999999999
Q ss_pred HHHHHHhcC-----CceEEEcccCCCCCCCCCCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHhc-Cchhhhhh
Q 014892 206 VKEYIEGAR-----PIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVK-GQFWRLRD 279 (416)
Q Consensus 206 ~~~~~~~~~-----~~~~vgE~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~~-~~~~~~~~ 279 (416)
|++++++++ +.+++||+|..+ ...+..+....+...++|||++...+.+++. +....+.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~gE~~~~~--------------~~~~~~~~~~~~~~~~~~df~~~~~l~~~~~~~~~~~l~~ 307 (394)
T d2d3na2 242 TRDWINHVRSATGKNMFAVAEFWKND--------------LGAIENYLQKTNWNHSVFDVPLHYNLYNASKSGGNYDMRN 307 (394)
T ss_dssp HHHHHHHHHHHHTCCCEEEECCCCSC--------------HHHHHHHHHHTTTCSEEECHHHHHHHHHHHHTTTCSCGGG
T ss_pred HHHHHHHHHHhcCCceeecccccccc--------------cccccchhccccccceeehHHHHHHHHHHHhcCcchhHHH
Confidence 999877664 378999999763 3455566655566788999999999998873 33334444
Q ss_pred hcCCCCCccccccCcceecccCCCCCCCCCCCCC-ChhhHHHHHHHHhc-CCCeeEEecCCcCCCch----hHHHHHHHH
Q 014892 280 AQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPF-PSNHIMEGYAYILM-HPGIPSVFYDHFYDWGD----SIHNQIVKL 353 (416)
Q Consensus 280 ~~~~~~~~~~~~p~~~~~fl~nHD~~R~~~~~~~-~~~~~~~a~a~llt-~pGiP~Iy~G~E~gw~~----~l~~~~~~L 353 (416)
.... ......|.++++|++|||++|..+.... ...+.++|++++|+ +|||||||||||+|... ...+.+++|
T Consensus 308 ~~~~--~~~~~~~~~~v~fl~NHD~~r~~~~~~~~~~~~~~la~a~~l~~~pGiP~iyyGdE~G~~~~~~p~~r~~~~~l 385 (394)
T d2d3na2 308 IFNG--TVVQRHPSHAVTFVDNHDSQPEEALESFVEEWFKPLAYALTLTREQGYPSVFYGDYYGIPTHGVPAMRSKIDPI 385 (394)
T ss_dssp TTTT--CHHHHCGGGEEECSCCTTTSTTSTTCCCCCTTTHHHHHHHHHSSSSSEEEEEHHHHHCBGGGTBCCCHHHHHHH
T ss_pred HHhc--cccccCHhHeeEeCcCCcCccccccccCccHHHHHHHHHHHHHcCCCeEEEEhhHhcCCCCCCCcchHHHHHHH
Confidence 3322 1223456788999999999998775543 23356778888776 49999999999998743 578899999
Q ss_pred HHHHHhCc
Q 014892 354 MDVRRQQD 361 (416)
Q Consensus 354 i~lR~~~~ 361 (416)
+++||+++
T Consensus 386 ~~~r~~~~ 393 (394)
T d2d3na2 386 LEARQKYA 393 (394)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHhC
Confidence 99999874
|
| >d1hvxa2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=100.00 E-value=3.5e-61 Score=476.74 Aligned_cols=319 Identities=27% Similarity=0.494 Sum_probs=239.2
Q ss_pred ccCceeEEEeeecCCCCC-CcHHHHHhhhhhHHHcCCCEEEeCCCCCCC--CCCCcccccCC---------CCCCCCCCH
Q 014892 25 RNGREILFQGFNWESCKH-DWWRNLERKVPDISKSGFTSVWLPPATHSF--APEGYLPQNLY---------SLNSSYGSE 92 (416)
Q Consensus 25 ~~~~~~~~q~f~~~~~~~-G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~--~~~GY~~~d~~---------~id~~~Gt~ 92 (416)
++-++||+|+|+|+.+.+ |++++|++||||||+||||+||||||+++. +++||++.||| +|+|+|||+
T Consensus 2 ~~~~~~~~~~f~w~~~~~~~~~~~i~~kLdyLk~LGv~aI~L~Pi~~~~~~~~~GY~~~d~y~~~~~~~~~~vd~~~Gt~ 81 (393)
T d1hvxa2 2 APFNGTMMQYFEWYLPDDGTLWTKVANEANNLSSLGITALWLPPAYKGTSRSDVGYGVYDLYDLGEFNQKGAVRTKYGTK 81 (393)
T ss_dssp CCCCCCEEECCCTTCCSSSCHHHHHHHHHHHHHHTTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCH
T ss_pred CCCCceEEEeEeeccCCCCChHHHHHHHHHHHHHcCCCEEEECCCCcCCCCCCCCCCccCccccccccccCCcCCCCCCH
Confidence 456799999999999876 479999999999999999999999999775 47999999997 599999999
Q ss_pred HHHHHHHHHHHHCCCEEEEEEccccCcCC--CCCCC--------------Cccc-----ccC--C--C-----CCC----
Q 014892 93 HLLKALLHKMKQHKVRAMADIVINHRVGT--TQGHG--------------GKYN-----RYD--G--I-----PLS---- 138 (416)
Q Consensus 93 ~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~--~~~~~--------------~~~~-----~f~--~--~-----~~~---- 138 (416)
+||++||++||++||+||||+|+||++.. ++|+. +.+. .+. + . ...
T Consensus 82 ~df~~LV~~aH~~GIkVIlDvV~NHt~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (393)
T d1hvxa2 82 AQYLQAIQAAHAAGMQVYADVVFDHKGGADGTEWVDAVEVNPSDRNQEISGTYQIQAWTKFDFPGRGNTYSSFKWRWYHF 161 (393)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCSEECCCSEEEEEEEEEEETTEEEEECSCCEEEEEEEEBCCTTTTTSSCCCCBCGGGE
T ss_pred HHHHHHHHHHHHCCCEEEEEEecccccccCCccceeecccCccccccccCCCcccccccccCCCCCCCCCCCcccccccC
Confidence 99999999999999999999999999753 22211 0000 000 0 0 000
Q ss_pred ----CCCCc----eecCC---CCCC----CCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcH
Q 014892 139 ----WDEHA----VTSCT---GGLG----NGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSA 203 (416)
Q Consensus 139 ----~~~~~----~~~~~---~~~~----~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~ 203 (416)
|.... ...+. ..+. .....+.+..+||||++||+|++++++++++|++++||||||+|+|++++.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~np~V~~~l~~~~~~w~~~~giDGfR~D~a~~i~~ 241 (393)
T d1hvxa2 162 DGVDWDESRKLSRIYKFRGIGKAWDWEVDTENGNYDYLMYADLDMDHPEVVTELKSWGKWYVNTTNIDGFRLDAVKHIKF 241 (393)
T ss_dssp EEEEEETTTTEEEEEEECSTTCCCCSSCCCTTSCCCCCSSEEECTTCHHHHHHHHHHHHHHHHHHCCCEEEETTGGGSCT
T ss_pred CCCcccccCCcCccccccCCcCccccccccccceeeccccceeccCChHHHHHHHHHHHHHHHhhCCceeeeeccccCCh
Confidence 10000 00000 0111 112234567899999999999999999999999889999999999999999
Q ss_pred HHHHHHHHhcC-----CceEEEcccCCCCCCCCCCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHhc-Cchhhh
Q 014892 204 KYVKEYIEGAR-----PIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVK-GQFWRL 277 (416)
Q Consensus 204 ~~~~~~~~~~~-----~~~~vgE~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~~-~~~~~~ 277 (416)
+||++++++++ +.+++||+|..+ ...+..|....++..++|||+++..+..++. +....+
T Consensus 242 ~f~~~~~~~~~~~~~~~~~~~gE~~~~~--------------~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~~~~ 307 (393)
T d1hvxa2 242 SFFPDWLSYVRSQTGKPLFTVGEYWSYD--------------INKLHNYIMKTNGTMSLFDAPLHNKFYTASKSGGTFDM 307 (393)
T ss_dssp THHHHHHHHHHHHHCCCCEEEECCCCSC--------------HHHHHHHHHHTTTCSEEECHHHHHHHHHHHHTTTCSCG
T ss_pred hHHHHHHHHHHHhcCCcceeeeeccCcc--------------HHHHHHHhhccccccchhhHHHHHHHHHHHccCCHHHH
Confidence 99999877653 478999999763 3556667666566788999999998888873 333334
Q ss_pred hhhcCCCCCccccccCcceecccCCCCCCCCCCCCC-ChhhHHHHHHHHhc-CCCeeEEecCCcCCCch----hHHHHHH
Q 014892 278 RDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPF-PSNHIMEGYAYILM-HPGIPSVFYDHFYDWGD----SIHNQIV 351 (416)
Q Consensus 278 ~~~~~~~~~~~~~~p~~~~~fl~nHD~~R~~~~~~~-~~~~~~~a~a~llt-~pGiP~Iy~G~E~gw~~----~l~~~~~ 351 (416)
.....+ ......|..+++||+|||++|+.+.... +..+.++|+|++|+ +||||+||||||+|... +....+.
T Consensus 308 ~~~~~~--~~~~~~~~~~v~fl~NHD~~r~~~~~~~~~~~~~~~a~a~~l~~~pGiP~iyyGdE~G~~~~~~p~~~~~i~ 385 (393)
T d1hvxa2 308 RTLMTN--TLMKDQPTLAVTFVDNHDTEPGQALQSWVDPWFKPLAYAFILTRQEGYPCVFYGDYYGIPQYNIPSLKSKID 385 (393)
T ss_dssp GGTTTT--CHHHHCGGGEEEESCCTTTSTTSTTCCCCCTTTHHHHHHHHHHSSSSEEEEEHHHHHCBGGGTBCCCHHHHH
T ss_pred HHHHHh--hhccCCcccEeEECcCCCCccccccccCCCHHHHHHHHHHHHHhCCCeEEEEhhHhcCCCCcCCCChHHHhH
Confidence 333322 1223345678999999999998775532 34566778887664 69999999999998653 5788999
Q ss_pred HHHHHHHh
Q 014892 352 KLMDVRRQ 359 (416)
Q Consensus 352 ~Li~lR~~ 359 (416)
.|+++||.
T Consensus 386 ~~~~~rk~ 393 (393)
T d1hvxa2 386 PLLIARRD 393 (393)
T ss_dssp HHHHHHHH
T ss_pred HHHHHcCC
Confidence 99999984
|
| >d3bmva4 c.1.8.1 (A:1-406) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Cyclodextrin glycosyltransferase species: Thermoanaerobacterium [TaxId: 28895]
Probab=100.00 E-value=7.9e-62 Score=483.28 Aligned_cols=321 Identities=16% Similarity=0.291 Sum_probs=236.6
Q ss_pred CceeEEEeeecCCCC-----------------------CCcHHHHHhhhh--hHHHcCCCEEEeCCCCCC----------
Q 014892 27 GREILFQGFNWESCK-----------------------HDWWRNLERKVP--DISKSGFTSVWLPPATHS---------- 71 (416)
Q Consensus 27 ~~~~~~q~f~~~~~~-----------------------~G~~~gi~~~Ld--yLk~LGv~~I~L~Pi~~~---------- 71 (416)
.++||||+|...+.. .|||+||++||| |||+||||+||||||+++
T Consensus 13 ~~~viY~i~~drF~~g~~~~d~~~~~~~~~~~~~~~~~gGdl~Gi~~kLd~~YLk~LGv~~I~L~Pi~~~~~~~~~~~~~ 92 (406)
T d3bmva4 13 STDVIYQIVTDRFVDGNTSNNPTGDLYDPTHTSLKKYFGGDWQGIINKINDGYLTGMGVTAIWIPQPVENIYAVLPDSTF 92 (406)
T ss_dssp TTCCEEECCGGGTCCCCGGGSCCGGGBCTTSCSTTSBCCCCHHHHHHHHHTSTTGGGTCCEEEECCCEEECCCCEEETTT
T ss_pred ccCeEEEechhhccCCCCCCCCCCCccCCCCCccCccCCcCHHHHHHhcCHHHHHHcCCCEEEECCcccccccccCCCCC
Confidence 457999999986531 389999999999 999999999999999873
Q ss_pred ---CCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccccCcCCCCCCCCcccc---cC------CCCCCC
Q 014892 72 ---FAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNR---YD------GIPLSW 139 (416)
Q Consensus 72 ---~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~---f~------~~~~~~ 139 (416)
.++|||+|.||++|+|+|||++|||+||++||++||+||||+|+||++..+++....... +. ....+.
T Consensus 93 ~~~~~~~gY~~~d~~~vdp~~Gt~~dfk~LV~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (406)
T d3bmva4 93 GGSTSYHGYWARDFKRTNPYFGSFTDFQNLINTAHAHNIKVIIDFAPNHTSPASETDPTYAENGRLYDNGTLLGGYTNDT 172 (406)
T ss_dssp EEECSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECTTEEEECCSSCTTSTTTTCEEETTEEEECSTTCT
T ss_pred CCChhhcCcccccccccCcccccHHHHHHHHHHHHhccccceeeeecccccccccchhhhcccCccccCCcccccccccc
Confidence 358999999999999999999999999999999999999999999999998765322110 00 000000
Q ss_pred CCCceecCCCCCCC--CCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcHHHHHHHHHhcC---
Q 014892 140 DEHAVTSCTGGLGN--GSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGAR--- 214 (416)
Q Consensus 140 ~~~~~~~~~~~~~~--~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~~~~~~~~~~~~--- 214 (416)
...........+.. ....+.+.++|+||+++|+|++++++++++|+ ++||||||+|+|++++.++|+++.+.++
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~~~-~~giDGfR~D~~~~~~~~~~~~~~~~~~~~~ 251 (406)
T d3bmva4 173 NGYFHHYGGTDFSSYEDGIYRNLFDLADLNQQNSTIDSYLKSAIKVWL-DMGIDGIRLDAVKHMPFGWQKNFMDSILSYR 251 (406)
T ss_dssp TCCBCCSCBCCCSSHHHHHHSBSTTEEEBCTTSHHHHHHHHHHHHHHH-HTTCCEEEESCGGGSCHHHHHHHHHHHHHHS
T ss_pred ccccccccCccccccccccccccccccccccccHHHHHHHHHHHHHHh-hcCCCccccccccccchhhHHHHHHHHHHhh
Confidence 00000000000000 00112346799999999999999999999998 8999999999999999999999987654
Q ss_pred CceEEEcccCCCCCCCCCCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHhcCc---hhhhhhhcCCCCCccccc
Q 014892 215 PIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKGQ---FWRLRDAQGKPPGVMGWW 291 (416)
Q Consensus 215 ~~~~vgE~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~ 291 (416)
|.+++||.|..... . .....+... ....+++||++...+...+.+. ...+...+..... ....
T Consensus 252 ~~~~~~e~~~~~~~----~--------~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 317 (406)
T d3bmva4 252 PVFTFGEWFLGTNE----I--------DVNNTYFAN-ESGMSLLDFRFSQKVRQVFRDNTDTMYGLDSMIQSTAS-DYNF 317 (406)
T ss_dssp CCEEEECCCCCTTC----C--------CHHHHHHHH-HSSSEEBCHHHHHHHHHHHTSCSSCHHHHHHHHHHHHH-HCTT
T ss_pred hccccccccccccc----c--------ccccccccC-CCccceecchhhHHHHHhhccCcchhHHHHHHHhhhcc-cccc
Confidence 68899998865311 0 111122211 1356789999999888887432 2222221110000 0112
Q ss_pred cCcceecccCCCCCCCCCCCCCChhhHHHHHHHHhcCCCeeEEecCCcCC-----------------CchhHHHHHHHHH
Q 014892 292 PSRAVTFLDNHDTGSTQAHWPFPSNHIMEGYAYILMHPGIPSVFYDHFYD-----------------WGDSIHNQIVKLM 354 (416)
Q Consensus 292 p~~~~~fl~nHD~~R~~~~~~~~~~~~~~a~a~llt~pGiP~Iy~G~E~g-----------------w~~~l~~~~~~Li 354 (416)
+...++|++|||++|+.+.. ..+++++|++++||+||+||||||||+| |+.+++++||+|+
T Consensus 318 ~~~~~~fl~nHD~~R~~~~~--~~~~~~~a~~~~lt~pG~P~IyyGdE~g~~g~~dp~~r~~~~~~~~~~~~~~~~~~Li 395 (406)
T d3bmva4 318 INDMVTFIDNHDMDRFYNGG--STRPVEQALAFTLTSRGVPAIYYGTEQYMTGNGDPYNRAMMTSFNTSTTAYNVIKKLA 395 (406)
T ss_dssp GGGCEECSCCSSSCCSCCSS--CSHHHHHHHHHHHHSSSEEEEETTGGGTCCCCSTTGGGCCCCCCCTTSHHHHHHHHHT
T ss_pred hhhhcccccCCchhhhccCC--CHHHHHHHHHHHHHhCCCCEEecChhhCcCCCCChhhhhcCCCCCCChHHHHHHHHHH
Confidence 34678999999999998753 4568999999999999999999999985 2357999999999
Q ss_pred HHHHhCcccC
Q 014892 355 DVRRQQDIHS 364 (416)
Q Consensus 355 ~lR~~~~~l~ 364 (416)
+|||++|+|+
T Consensus 396 ~lRk~~paLr 405 (406)
T d3bmva4 396 PLRKSNPAIA 405 (406)
T ss_dssp THHHHCHHHH
T ss_pred HHHhhChhhc
Confidence 9999999986
|
| >d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltogenic amylase, central domain species: Thermoactinomyces vulgaris, TVAII [TaxId: 2026]
Probab=100.00 E-value=3.3e-61 Score=474.47 Aligned_cols=319 Identities=15% Similarity=0.249 Sum_probs=241.1
Q ss_pred eeccCceeEEEeeecCCCC-------------------------CCcHHHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCc
Q 014892 23 VIRNGREILFQGFNWESCK-------------------------HDWWRNLERKVPDISKSGFTSVWLPPATHSFAPEGY 77 (416)
Q Consensus 23 ~~~~~~~~~~q~f~~~~~~-------------------------~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY 77 (416)
+-|-.++||||+|.+.+.. .|||+||++||||||+||||+||||||++++++|||
T Consensus 5 P~w~~~~viY~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~gi~~kLdyl~~lGi~~I~l~Pv~~~~~~~gY 84 (382)
T d1wzla3 5 PEWAKEAVIYQIFPERFANGDPSNDPPGTEQWAKDARPRHDSFYGGDLKGVIDRLPYLEELGVTALYFTPIFASPSHHKY 84 (382)
T ss_dssp CSGGGGCCEEEECGGGTCCCCGGGCCTTCCCCCTTCCCCTTCCCCCCHHHHHHTHHHHHHHTCCEEEECCCEECSSSSCC
T ss_pred CccccCCEEEEEEcchhcCCCCCCCCccccccccccccccCCCCCcCHHHHHHhhHHHHHCCCCEEEECCcCCCCcccCC
Confidence 4444558999999986531 289999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccccCcCCCCCCCCcccccCC-C---CCCCCCCceecCCCCCCC
Q 014892 78 LPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDG-I---PLSWDEHAVTSCTGGLGN 153 (416)
Q Consensus 78 ~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~-~---~~~~~~~~~~~~~~~~~~ 153 (416)
+|.||++|+|+|||++|||+||++||++||+||+|+|+||++..++++......... . ...+.+.... ..+....
T Consensus 85 ~~~~~~~vd~~~Gt~~d~~~lv~~~H~~Gi~vilD~V~NH~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 163 (382)
T d1wzla3 85 DTADYLAIDPQFGDLPTFRRLVDEAHRRGIKIILDAVFNHAGDQFFAFRDVLQKGEQSRYKDWFFIEDFPVS-KTSRTNY 163 (382)
T ss_dssp SCSEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEEECCSBCCTTSHHHHHHHHHGGGCTTGGGBCBSSSSCC-CSSCCSB
T ss_pred ccccccccccCCCCHHHHHHHHHHHHhcccceEeeeeecccccccccccchhhcCccccccccccccccccc-cCCCCcc
Confidence 999999999999999999999999999999999999999999998764321100000 0 0011111000 0011111
Q ss_pred CCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcHHHHHHHHHhcC---C-ceEEEcccCCCCCC
Q 014892 154 GSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGAR---P-IFSVGEYWDSCNYN 229 (416)
Q Consensus 154 ~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~~~~~~~~~~~~---~-~~~vgE~~~~~~~~ 229 (416)
......+..+||||++||+||+++++++++|+ ++||||||+|++++++.++|+++...++ | .+++||.|....
T Consensus 164 ~~~~~~~~~~~dLn~~n~~v~~~~~~~~~~w~-~~gvDGfR~D~~~~~~~~~~~~~~~~~~~~~p~~~~i~e~~~~~~-- 240 (382)
T d1wzla3 164 ETFAVQVPAMPKLRTENPEVKEYLFDVARFWM-EQGIDGWRLDVANEVDHAFWREFRRLVKSLNPDALIVGEIWHDAS-- 240 (382)
T ss_dssp CBSSSSCTTCBBBCTTSHHHHHHHHHHHHHHH-HTTCCEEEETTGGGSCHHHHHHHHHHHHHHCTTCEEEECCSSCCG--
T ss_pred cccccccccCCccCCCCHHHHHHHHHHHHHHH-HcCCCceeecchhhcchhhhhHHHHHHHhhCCceEEeeecccccc--
Confidence 12334568899999999999999999999999 6899999999999999999999887764 4 678999887521
Q ss_pred CCCCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHhc-Cchh--h----hhhhcCCCCCccccccCcceecccCC
Q 014892 230 SHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVK-GQFW--R----LRDAQGKPPGVMGWWPSRAVTFLDNH 302 (416)
Q Consensus 230 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~~-~~~~--~----~~~~~~~~~~~~~~~p~~~~~fl~nH 302 (416)
.++. ..+.++++++.+...+...+. +... . ...... ......+...++|++||
T Consensus 241 ----------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~f~~nH 300 (382)
T d1wzla3 241 ----------------GWLM-GDQFDSVMNYLFRESVIRFFATGEIHAERFDAELTRARM---LYPEQAAQGLWNLLDSH 300 (382)
T ss_dssp ----------------GGCS-SSSCSEEBCHHHHHHHHHHHTSCCSCHHHHHHHHHHHHT---TSCHHHHTTCEEESCCT
T ss_pred ----------------hhhc-ccccchhhhhhHHHHHHHhhhcCccchhhHHHHHHhhhh---cccccccccceeeecCC
Confidence 0111 123567888888777777652 2211 0 011110 00111233568999999
Q ss_pred CCCCCCCCCCCChhhHHHHHHHHhcCCCeeEEecCCcCC--------------Cc-----hhHHHHHHHHHHHHHhCccc
Q 014892 303 DTGSTQAHWPFPSNHIMEGYAYILMHPGIPSVFYDHFYD--------------WG-----DSIHNQIVKLMDVRRQQDIH 363 (416)
Q Consensus 303 D~~R~~~~~~~~~~~~~~a~a~llt~pGiP~Iy~G~E~g--------------w~-----~~l~~~~~~Li~lR~~~~~l 363 (416)
|++|+.+.+..+..++++|++++||+||+|+||||||+| |+ +++++++|+|++|||++|+|
T Consensus 301 D~~r~~~~~~~~~~~~~~a~~~llt~pG~P~iy~G~E~g~~g~~~~~~r~~~~W~~~~~~~~l~~~~~~L~~lR~~~paL 380 (382)
T d1wzla3 301 DTERFLTSCGGNEAKFRLAVLFQMTYLGTPLIYYGDEIGMAGATDPDCLRPMIWEEKEQNRGLFEFYKELIRLRHRLASL 380 (382)
T ss_dssp TSCCHHHHTTTCHHHHHHHHHHHHHSSSEEEEETTGGGTCCCCSTTGGGCCCCCCGGGSCHHHHHHHHHHHHHHHHCHHH
T ss_pred CccchHhhcCCCHHHHHHHHHHHHHcCCCCEEEcCcccCCCCCCCccccCCCCCCccccChHHHHHHHHHHHHHhhCHhh
Confidence 999988877767778999999999999999999999985 32 47999999999999999999
Q ss_pred CC
Q 014892 364 SR 365 (416)
Q Consensus 364 ~~ 365 (416)
++
T Consensus 381 ~r 382 (382)
T d1wzla3 381 TR 382 (382)
T ss_dssp HH
T ss_pred CC
Confidence 63
|
| >d1qhoa4 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Cyclodextrin glycosyltransferase species: Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]
Probab=100.00 E-value=1.3e-61 Score=481.93 Aligned_cols=326 Identities=16% Similarity=0.263 Sum_probs=235.4
Q ss_pred ccCceeEEEeeecCCCC--------------------------CCcHHHHHhhhhhHHHcCCCEEEeCCCCCCC------
Q 014892 25 RNGREILFQGFNWESCK--------------------------HDWWRNLERKVPDISKSGFTSVWLPPATHSF------ 72 (416)
Q Consensus 25 ~~~~~~~~q~f~~~~~~--------------------------~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~------ 72 (416)
+-.++||||+|...+.. .|||+||++||||||+||||+||||||++++
T Consensus 5 ~~~~~v~Y~i~~drF~~gd~~~~~~~~~~~~~~~~~~~~~~~~gGd~~gi~~kLdyl~~LGv~~I~L~Pi~~~~~~~~~~ 84 (407)
T d1qhoa4 5 SVKGDVIYQIIIDRFYDGDTTNNNPAKSYGLYDPTKSKWKMYWGGDLEGVRQKLPYLKQLGVTTIWLSPVLDNLDTLAGT 84 (407)
T ss_dssp CCTTCCEEEECGGGTCCSCGGGSSCGGGTTCBCTTSCSTTSBCCCCHHHHHHTHHHHHHHTCCEEEECCCEEECSSCSST
T ss_pred hhcCCEEEEechhhhcCCCCCCCcccccccccCCcccccCccCCcCHHHHHHHHHHHHHcCCCEEEeCccccCCcccCCC
Confidence 34559999999976531 2899999999999999999999999999753
Q ss_pred ---CCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccccCcCCCCCCCCccc---ccCCC---CCCCCCCc
Q 014892 73 ---APEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYN---RYDGI---PLSWDEHA 143 (416)
Q Consensus 73 ---~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~---~f~~~---~~~~~~~~ 143 (416)
++|||+|.||++|+|+|||++|||+||++||++||+||||+|+||++..+++...... .+... ...+.+..
T Consensus 85 ~~~~~~gY~~~d~~~id~~~Gt~~d~k~Lv~~~H~~Gi~VilD~V~NH~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (407)
T d1qhoa4 85 DNTGYHGYWTRDFKQIEEHFGNWTTFDTLVNDAHQNGIKVIVDFVPNHSTPFKANDSTFAEGGALYNNGTYMGNYFDDAT 164 (407)
T ss_dssp TCCCTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECTTEEEEEBTTBTTSTTTTCEEETTEEEECSSSCTT
T ss_pred CCCCCCceeeeecCCCCCCCCCHHHHHHHHHHhhhcccceeeccccccccCCccccccccccCcccccCccccccccccc
Confidence 5799999999999999999999999999999999999999999999988775432110 00000 00011000
Q ss_pred -eecCCCCCC-----------CCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcHHHHHHHHH
Q 014892 144 -VTSCTGGLG-----------NGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIE 211 (416)
Q Consensus 144 -~~~~~~~~~-----------~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~~~~~~~~~ 211 (416)
.....++.. ..........+||||+.||+||+++++++++|+ ++||||||+|+|++++.+||+++.+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~n~~v~~~~~~~~~~w~-~~gvDGfR~D~~~~~~~~f~~~~~~ 243 (407)
T d1qhoa4 165 KGYFHHNGDISNWDDRYEAQWKNFTDPAGFSLADLSQENGTIAQYLTDAAVQLV-AHGADGLRIDAVKHFNSGFSKSLAD 243 (407)
T ss_dssp TCCBCCSCBCSCTTCHHHHHHSBCEETTTEEEEEBCTTSHHHHHHHHHHHHHHH-HTTCCEEEETTGGGSCHHHHHHHHH
T ss_pred cccccccCCCCCcccccccccccccCCccccCchhhhhhhhHHHHHHHhHHHHh-hhcccccccccccccchhHHHHHHH
Confidence 000000000 001112234579999999999999999999999 7999999999999999999999988
Q ss_pred hcC---CceEEEcccCCCCCCCCCCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHhcC---chhhhhhhcCCCC
Q 014892 212 GAR---PIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKG---QFWRLRDAQGKPP 285 (416)
Q Consensus 212 ~~~---~~~~vgE~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~~~---~~~~~~~~~~~~~ 285 (416)
+++ +.+++||+|...+. ... ......+.. .....++++.+...+...+.. ....+.......
T Consensus 244 ~i~~~~~~~~~gE~~~~~~~------~~~---~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~- 311 (407)
T d1qhoa4 244 KLYQKKDIFLVGEWYGDDPG------TAN---HLEKVRYAN--NSGVNVLDFDLNTVIRNVFGTFTQTMYDLNNMVNQT- 311 (407)
T ss_dssp HHHHHCCCEEEECCCCCCTT------STT---HHHHHHHHH--HSSCEEBCHHHHHHHHHHHTSCSSCHHHHHHHHHHH-
T ss_pred HHHhccCcceeeeecCCChh------hhH---HHHhhcccc--ccccceehhhHHHHHHHHhhhcchhhhHHHHHHHHh-
Confidence 765 47899999875321 110 011112221 134567788877777776522 122222211100
Q ss_pred CccccccCcceecccCCCCCCCCCCCCCChhhHHHHHHHHhcCCCeeEEecCCcCC-----------------CchhHHH
Q 014892 286 GVMGWWPSRAVTFLDNHDTGSTQAHWPFPSNHIMEGYAYILMHPGIPSVFYDHFYD-----------------WGDSIHN 348 (416)
Q Consensus 286 ~~~~~~p~~~~~fl~nHD~~R~~~~~~~~~~~~~~a~a~llt~pGiP~Iy~G~E~g-----------------w~~~l~~ 348 (416)
......+...++|++|||++|+.+... +..++++|++++||+||+||||||||+| ++.++++
T Consensus 312 ~~~~~~~~~~~~f~~nHD~~R~~~~~~-~~~~~~~a~a~ll~~pGiP~iyyGdE~G~~g~~d~~~r~~~~~~~~~~~~~~ 390 (407)
T d1qhoa4 312 GNEYKYKENLITFIDNHDMSRFLSVNS-NKANLHQALAFILTSRGTPSIYYGTEQYMAGGNDPYNRGMMPAFDTTTTAFK 390 (407)
T ss_dssp HHHCTTGGGCEECSCCTTSCCHHHHCC-CHHHHHHHHHHHHHSSSEEEEETTGGGTCCCCSTTTTCCCCCCCCTTSHHHH
T ss_pred hhccccchhhceecccCCccccccccC-CHHHHHHHHHHHHHcCCCcEEecCHhhCCCCCCCccccccCCcccCChHHHH
Confidence 000112346789999999999887665 5678999999999999999999999985 2358999
Q ss_pred HHHHHHHHHHhCcccC
Q 014892 349 QIVKLMDVRRQQDIHS 364 (416)
Q Consensus 349 ~~~~Li~lR~~~~~l~ 364 (416)
++|+|++|||++|+|+
T Consensus 391 ~~~~L~~lR~~~paLr 406 (407)
T d1qhoa4 391 EVSTLAGLRRNNAAIQ 406 (407)
T ss_dssp HHHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHhhCHhhC
Confidence 9999999999999986
|
| >d1lwha2 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: 4-alpha-glucanotransferase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=1.6e-60 Score=470.93 Aligned_cols=312 Identities=20% Similarity=0.280 Sum_probs=232.1
Q ss_pred eEEEeeecCCCC-----CCcHHHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCHHHHHHHHHHHHH
Q 014892 30 ILFQGFNWESCK-----HDWWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQ 104 (416)
Q Consensus 30 ~~~q~f~~~~~~-----~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~ 104 (416)
|+||+|.+.+.. -|||+||++||||||+||||+|||+||+++.++|||+|+||++|+|+|||++||++||++||+
T Consensus 2 v~Yei~~~~F~d~~~dg~Gd~~gi~~kLdyl~~LGv~~I~l~Pi~~~~~~~GY~~~d~~~vd~~~Gt~~d~~~lv~~~h~ 81 (391)
T d1lwha2 2 IGYQIYVRSFRDGNLDGVGDFRGLKNAVSYLKELGIDFVWLMPVFSSISFHGYDVVDFYSFKAEYGSEREFKEMIEAFHD 81 (391)
T ss_dssp CEEEECGGGTCCSSSSSSCCHHHHHHTHHHHHHTTCSEEEECCCEECSSSSCCSCSEEEEECGGGCCHHHHHHHHHHHHH
T ss_pred EEEEEccccccCCCCCCccCHHHHHHhhHHHHHcCCCEEEECCCCCCCCCCCCCccCCCCcCcccCCHHHHHHHHHHHHh
Confidence 799999988753 279999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEEEccccCcCCCCCCCC------cc---cccCCCCC------CCCCCceecCCCCCCCCCCCCCCCCCCcCCCC
Q 014892 105 HKVRAMADIVINHRVGTTQGHGG------KY---NRYDGIPL------SWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHT 169 (416)
Q Consensus 105 ~Gi~VilD~V~NH~~~~~~~~~~------~~---~~f~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~ 169 (416)
+||+||+|+|+||++..++++.. .| ..+..... .|........ ........+.+...+||||++
T Consensus 82 ~gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~pdln~~ 160 (391)
T d1lwha2 82 SGIKVVLDLPIHHTGFLHTWFQKALKGDPHYRDYYVWANKETDLDERREWDGEKIWHP-LEDGRFYRGLFGPFSPDLNYD 160 (391)
T ss_dssp TTCEEEEEECTTBCCTTSHHHHHHHTTCHHHHTTBCBCCTTCCTTCBCSSSCCBCEEE-CTTSCEEECTTCTTSCBBCTT
T ss_pred cCCEEeecccccccccccccccccccCCccccccceecCCccccCccccCCCCccccc-cCCCcccccccCCcCCccccc
Confidence 99999999999999999875321 11 11110000 1111100000 001111222334679999999
Q ss_pred CHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcH------HHHHHHHHhcCCceEEEcccCCCCCCCCCCCCccchhhHh
Q 014892 170 QHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSA------KYVKEYIEGARPIFSVGEYWDSCNYNSHGLDYNQDSHRQR 243 (416)
Q Consensus 170 ~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~------~~~~~~~~~~~~~~~vgE~~~~~~~~~~~~~~~~~~~~~~ 243 (416)
||+||++|++++++|+ ++||||||+|+|++++. .+|+++.+.++ .+.++|.|..... ...
T Consensus 161 n~~v~~~i~~~~~~w~-e~gvDGfR~Daa~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~------------~~~ 226 (391)
T d1lwha2 161 NPQVFDEMKRLVLHLL-DMGVDGFRFDAAKHMRDTIEQNVRFWKYFLSDLK-GIFLAEIWAEARM------------VDE 226 (391)
T ss_dssp SHHHHHHHHHHHHHHH-HHTCCEEEETTGGGSSSSHHHHHHHHHHHHTTCC-SEEEECCCSCSSS------------HHH
T ss_pred cchhhHHHHHHHHHHh-hcCCCcceechHHHHHHhhhhhhHHHHHHHHHhh-hhhhhhhhcccce------------eec
Confidence 9999999999999998 89999999999999984 56777777765 5788998865210 011
Q ss_pred HhhhhccCCCcccccCchhhHHHHHHhc-CchhhhhhhcCCCCCccccccCcceecccCCCCCCCCCCCCC-ChhhHHHH
Q 014892 244 IINWIDGTGQLSAAFDFTTKGILQEAVK-GQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPF-PSNHIMEG 321 (416)
Q Consensus 244 l~~~~~~~~~~~~~fdf~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~fl~nHD~~R~~~~~~~-~~~~~~~a 321 (416)
... .+..++++.+...+..++. .....+....... ....+...++|++|||+.|+.+.... +.++.++|
T Consensus 227 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~f~~nhD~~~~~~~~~~~~~~~~~~a 297 (391)
T d1lwha2 227 HGR------IFGYMLNFDTSHCIKEAVWKENTRVLIESIERA---VIAKDYLPVNFTSNHDMSRLASFEGGFSKEKIKLS 297 (391)
T ss_dssp HHH------HHEEEECHHHHHHHHHHHHHTCTHHHHHHHHHH---TSSCSSEEEEESCCTTSCCGGGGGGCCCHHHHHHH
T ss_pred ccc------ccCceecccHHHHHHHHHhhccHHHHHHHHHhh---cccCCcccccccccccccccccccccchhhHHHHH
Confidence 111 2456788888888877763 2222222222110 11122356899999999998776543 56789999
Q ss_pred HHHHhcCCCeeEEecCCcCC------------------Cch--------------------------------hHHHHHH
Q 014892 322 YAYILMHPGIPSVFYDHFYD------------------WGD--------------------------------SIHNQIV 351 (416)
Q Consensus 322 ~a~llt~pGiP~Iy~G~E~g------------------w~~--------------------------------~l~~~~~ 351 (416)
++++||+||+||||||||+| |+. ++++++|
T Consensus 298 ~~lllt~pG~P~IyyGdE~G~~~~~~~~~~~~~r~pm~W~~~~~~~~~~~~~~~~~~~~~~~~nve~q~~~~~s~~~~~~ 377 (391)
T d1lwha2 298 ISILFTLPGVPLVFYGDELGMKGVYQKPNTEVVLDPFPWNESMCVEGQTFWKWPAYNGPFSGISVEYQKRDPDSILSHTL 377 (391)
T ss_dssp HHHHTTSSSEEEEETTGGGTCCCCCCSSCGGGGSCCCCSSTTSCSTTCCCSSCCSSCCSSSSCSHHHHTTCTTSHHHHHH
T ss_pred HHHhhcCCCCCEEecchhcCCcCCCCCCCcccccCCCCCCCCCCCCCCCCCCCcCCCCcccccCHHHHHhCchHHHHHHH
Confidence 99999999999999999975 321 2999999
Q ss_pred HHHHHHHhCcccCC
Q 014892 352 KLMDVRRQQDIHSR 365 (416)
Q Consensus 352 ~Li~lR~~~~~l~~ 365 (416)
+||+|||+||+|.+
T Consensus 378 ~Li~lRk~~~al~r 391 (391)
T d1lwha2 378 GWTRFRKENQWIDR 391 (391)
T ss_dssp HHHHHHHTCGGGGG
T ss_pred HHHHHHhhChhhcC
Confidence 99999999999964
|
| >d1wzaa2 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Halothermothrix orenii [TaxId: 31909]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Halothermothrix orenii [TaxId: 31909]
Probab=100.00 E-value=4.1e-60 Score=469.43 Aligned_cols=316 Identities=19% Similarity=0.326 Sum_probs=240.0
Q ss_pred cCceeEEEeeecCCCCC-----CcHHHHHhhhhhH--------HHcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCH
Q 014892 26 NGREILFQGFNWESCKH-----DWWRNLERKVPDI--------SKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSE 92 (416)
Q Consensus 26 ~~~~~~~q~f~~~~~~~-----G~~~gi~~~LdyL--------k~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~ 92 (416)
.+++||||+|.+.++.+ |||+||++||||| |+||||+||||||++++++|||+|.||++|||+|||.
T Consensus 2 ~k~~v~Y~~~~~~f~d~~~~~~Gd~~g~~~kLdyl~~~~~~~i~~LGv~~i~l~Pi~~~~~~~GY~~~d~~~vd~~~G~~ 81 (409)
T d1wzaa2 2 EKHGTYYEIFVRSFYDSDGDGIGDLKGIIEKLDYLNDGDPETIADLGVNGIWLMPIFKSPSYHGYDVTDYYKINPDYGTL 81 (409)
T ss_dssp CCCCCEEEECGGGSCCSSSSSCCCHHHHHHTHHHHCCSCTTCCSSCCCSEEEECCCEECSSSSCCSCSEEEEECGGGCCH
T ss_pred CCccEEEEEecchhcCCCCCCCcCHHHHHHhccccccccccHHhhcCccEEEECCCCCCCCCCCcCcccCCCcCcccCCH
Confidence 35789999999987644 8999999999998 7999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHCCCEEEEEEccccCcCCCCCCCC----------cccccCCCCCCCCCC-----ceecCCCCCCCCCCC
Q 014892 93 HLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGG----------KYNRYDGIPLSWDEH-----AVTSCTGGLGNGSTG 157 (416)
Q Consensus 93 ~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~----------~~~~f~~~~~~~~~~-----~~~~~~~~~~~~~~~ 157 (416)
+|||+||++||++||+||+|+|+||++.++++... .|..+.+...+..+. ....+ .......+
T Consensus 82 ~dlk~lv~~~H~~Gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 159 (409)
T d1wzaa2 82 EDFHKLVEAAHQRGIKVIIDLPINHTSERHPWFLKASRDKNSEYRDYYVWAGPDTDTKETKLDGGRVWHY--SPTGMYYG 159 (409)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCCSBCCTTSHHHHHHHTCTTCTTGGGBCBCCSCCCCCBCSSSCBCSEEE--ETTEEEEC
T ss_pred HHHHHHHHHHHhcCCEEEEecccccccccCcchhhhhccccccccccccccccccccCccccCCCccccc--cccccccc
Confidence 99999999999999999999999999999874321 121222111000000 00000 00111234
Q ss_pred CCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCc--------HHHHHHHHHhcC---CceEEEcccCCC
Q 014892 158 DNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYS--------AKYVKEYIEGAR---PIFSVGEYWDSC 226 (416)
Q Consensus 158 ~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~--------~~~~~~~~~~~~---~~~~vgE~~~~~ 226 (416)
.++.++||||+.||+||+++++++++|+ ++||||||+|+++++. ..+|+++++.++ |.+++||.|..
T Consensus 160 ~~~~~~~dln~~n~~vr~~~~~~~~~wi-~~gVDGfR~D~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~- 237 (409)
T d1wzaa2 160 YFWSGMPDLNYNNPEVQEKVIGIAKYWL-KQGVDGFRLDGAMHIFPPAQYDKNFTWWEKFRQEIEEVKPVYLVGEVWDI- 237 (409)
T ss_dssp SSCTTSCBBCTTSHHHHHHHHHHHHHHH-HTTCCEEEEECCCTTSCGGGTTHHHHHHHHHHHHHTTTSCCEEEEECCSC-
T ss_pred cCCCCCcccccccHHHHHHHHHHHHHHH-HcCCCeecccchhhcccchhccchhHHHHHHHHhhccCCCcEEEEEeecC-
Confidence 5578899999999999999999999999 6799999999999984 468888887765 57899999875
Q ss_pred CCCCCCCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHhc-Cchh-------hhhhhcCCCCCccccccCcceec
Q 014892 227 NYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVK-GQFW-------RLRDAQGKPPGVMGWWPSRAVTF 298 (416)
Q Consensus 227 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~~-~~~~-------~~~~~~~~~~~~~~~~p~~~~~f 298 (416)
.+.+..+.. .++..++++.+...+..... +... .+...... .....+...++|
T Consensus 238 --------------~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~f 298 (409)
T d1wzaa2 238 --------------SETVAPYFK--YGFDSTFNFKLAEAVIATAKAGFPFGFNKKAKHIYGVYDR---EVGFGNYIDAPF 298 (409)
T ss_dssp --------------HHHHGGGGT--TTCSEEBCHHHHHHHHHHHHHTCSHHHHHHHHHHHHHHHH---HTCTTSCCCBCB
T ss_pred --------------ccchhhhhh--cccccchhhhHHHHHHHHHhccCccchHHHHHHHHHhhhh---hhcccccccccc
Confidence 233334433 35778888887777666542 2111 11111000 011122345789
Q ss_pred ccCCCCCCCCCCCCCChhhHHHHHHHHhcCCCeeEEecCCcCC---------------Cc--------------------
Q 014892 299 LDNHDTGSTQAHWPFPSNHIMEGYAYILMHPGIPSVFYDHFYD---------------WG-------------------- 343 (416)
Q Consensus 299 l~nHD~~R~~~~~~~~~~~~~~a~a~llt~pGiP~Iy~G~E~g---------------w~-------------------- 343 (416)
++|||++|+.+.++.+..+++++++++||+||+||||||||+| |+
T Consensus 299 ~~nhD~~r~~~~~~~~~~~~~~~~~~~lt~pG~P~iy~G~E~G~~~~~~~~~~R~p~~w~~~~~~~~~~~~~~~~~~~~~ 378 (409)
T d1wzaa2 299 LTNHDQNRILDQLGQDRNKARVAASIYLTLPGNPFIYYGEEIGMRGQGPHEVIREPFQWYNGSGEGETYWEPAMYNDGFT 378 (409)
T ss_dssp SCCTTSCCHHHHTTTCHHHHHHHHHHHTTSSSCCEEETTGGGTCCCCSSHHHHTCCCCCSSSCCTTCCCSSCCTTTTTTC
T ss_pred ccccccCccccccCCchHHHHHHHHHHHhCCCCCEEecChhhCccCCCCCccccCCCCCCCCCCCCCCcCCccccccccc
Confidence 9999999998888777889999999999999999999999985 21
Q ss_pred ---------hhHHHHHHHHHHHHHhCcccC
Q 014892 344 ---------DSIHNQIVKLMDVRRQQDIHS 364 (416)
Q Consensus 344 ---------~~l~~~~~~Li~lR~~~~~l~ 364 (416)
.++++++|+||+|||++|+|+
T Consensus 379 ~~~~~~~~~~s~~~~~~~Li~lRk~~pal~ 408 (409)
T d1wzaa2 379 SVEQEEKNLDSLLNHYRRLIHFRNENPVFY 408 (409)
T ss_dssp CHHHHTTCTTSHHHHHHHHHHHHHHCTHHH
T ss_pred CHHHHhhCcHHHHHHHHHHHHHHhhCchhc
Confidence 138999999999999999986
|
| >d1ua7a2 c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus subtilis [TaxId: 1423]
Probab=100.00 E-value=1.3e-60 Score=464.68 Aligned_cols=300 Identities=16% Similarity=0.234 Sum_probs=219.0
Q ss_pred cCceeEEEeeecCCCCCCcHHHHHhhhhhHHHcCCCEEEeCCCCCCCC-----------CCCcccccCCCCCCCCCCHHH
Q 014892 26 NGREILFQGFNWESCKHDWWRNLERKVPDISKSGFTSVWLPPATHSFA-----------PEGYLPQNLYSLNSSYGSEHL 94 (416)
Q Consensus 26 ~~~~~~~q~f~~~~~~~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~-----------~~GY~~~d~~~id~~~Gt~~d 94 (416)
..+++|+|+|+|+ |++|++||||||+||||+||||||++++. ||||+|.||++|+|+|||++|
T Consensus 3 ~~~~~i~~~f~~~------f~~i~~~ldyl~~lGv~aIwl~Pi~~~~~~~~~~~~~~~~y~gY~~~dy~~vd~~~Gt~~d 76 (344)
T d1ua7a2 3 IKSGTILHAWNWS------FNTLKHNMKDIHDAGYTAIQTSPINQVKEGNQGDKSMSNWYWLYQPTSYQIGNRYLGTEQE 76 (344)
T ss_dssp TTTSCEEECTTBC------HHHHHHTHHHHHHTTCSEEEECCCEEECCTGGGCCBGGGGGGGGCEEEEEEEETTTEEHHH
T ss_pred CCCCeEEEecCCc------HHHHHHhHHHHHHcCCCEEEeCCCeeCCCcCCCCCCCCCCccccccccCCCCCCCCCCHHH
Confidence 3457999999998 99999999999999999999999998762 699999999999999999999
Q ss_pred HHHHHHHHHHCCCEEEEEEccccCcCCCCCCCCcccccCCCCCCCC-CC-ceecCCCCCCCCCCCCCCCCCCcCCCCCHH
Q 014892 95 LKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWD-EH-AVTSCTGGLGNGSTGDNFHGVPNIDHTQHF 172 (416)
Q Consensus 95 ~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~dln~~~~~ 172 (416)
||+||++||++|||||+|+|+||++.+++++...+..+. .|. .. .+.++.+.+ ....+.+.++||||++||+
T Consensus 77 f~~LV~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~--~~~~~~~~~l~Dln~~np~ 150 (344)
T d1ua7a2 77 FKEMCAAAEEYGIKVIVDAVINHTTFDYAAISNEVKSIP----NWTHGNTQIKNWSDRW--DVTQNSLLGLYDWNTQNTQ 150 (344)
T ss_dssp HHHHHHHHHTTTCEEEEEECCSBCCSCTTTSCHHHHTST----TCEEECCBCCCTTCHH--HHHHSBBTTBCEECTTSHH
T ss_pred HHHHHHHhcccceeEeeccceeeecCCCchhhccccCCc----ccccCCCCCCCCCCCc--CcccCccccCCccccCChH
Confidence 999999999999999999999999999998765432211 111 00 011111110 1223456789999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCeEEecccCCCcH----HHHHHHHHhcC---CceEEEcccCCCCCCCCCCCCccchhhHhHh
Q 014892 173 VRKDIIAWLRWLRNTVGFQDFRFDFARGYSA----KYVKEYIEGAR---PIFSVGEYWDSCNYNSHGLDYNQDSHRQRII 245 (416)
Q Consensus 173 v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~----~~~~~~~~~~~---~~~~vgE~~~~~~~~~~~~~~~~~~~~~~l~ 245 (416)
||++|++++++|+ ++||||||+|+|++|+. .+++++...++ +.|++||+|.+.+ ....
T Consensus 151 Vr~~l~~~~~~w~-~~giDGfR~Daakhv~~~~~~~~~~~~~~~~~~~~~~~~~gE~~~~~~--------------~~~~ 215 (344)
T d1ua7a2 151 VQSYLKRFLERAL-NDGADGFRFDAAKHIELPDDGSYGSQFWPNITNTSAEFQYGEILQDSA--------------SRDA 215 (344)
T ss_dssp HHHHHHHHHHHHH-HTTCCEEEETTGGGSCCTTSGGGCCSHHHHHTCSSCSEEEECCCCSTT--------------CCHH
T ss_pred HHHHHHHHHHHHH-hcCCCeEEEeeeeccCchhhHHHHHHHHHHHHhcCCceEEEEEeeccc--------------hhhh
Confidence 9999999999999 78999999999999975 45555544433 5789999997632 1122
Q ss_pred hhhccCCCcccccCchhhHHHHHHhcCchhhhhhhcCCCCCccccccCcceecccCCCCCCCCCCCC--CChhhHHHHHH
Q 014892 246 NWIDGTGQLSAAFDFTTKGILQEAVKGQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWP--FPSNHIMEGYA 323 (416)
Q Consensus 246 ~~~~~~~~~~~~fdf~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~fl~nHD~~R~~~~~~--~~~~~~~~a~a 323 (416)
.+.. .....++.+...+++++.+....+..... . .-...+.++++|++|||+.|...... ....+.++|+|
T Consensus 216 ~~~~----~~~~~~~~f~~~l~~~~~~~~~~~~~~~~-~--~~~~~~~~~v~f~~NHD~~r~~~~~~~~~~~~~~~la~a 288 (344)
T d1ua7a2 216 AYAN----YMDVTASNYGHSIRSALKNRNLGVSNISH-Y--ASDVSADKLVTWVESHDTYANDDEESTWMSDDDIRLGWA 288 (344)
T ss_dssp HHHT----TSEEECHHHHHHHHHHHHHTCCCHHHHSS-C--SSSSCGGGEEECSSCHHHHHSTTCSSTTCCHHHHHHHHH
T ss_pred hhcc----CCccccccccchHHHHHhcCCcchhhHHH-H--HhcCCHhhhchHhhcCCCCCCcccccccCCHHHHHHHHH
Confidence 2322 23445566666777776332211211111 0 01123457899999999988654332 24567899999
Q ss_pred HHhcCC-CeeEEecCCcCCCc---------------h-hHHHHHHHHHHHHHh
Q 014892 324 YILMHP-GIPSVFYDHFYDWG---------------D-SIHNQIVKLMDVRRQ 359 (416)
Q Consensus 324 ~llt~p-GiP~Iy~G~E~gw~---------------~-~l~~~~~~Li~lR~~ 359 (416)
++|++| |+||||||+|+|-. . --.+.+.+|+++|+.
T Consensus 289 ~ll~~~~G~P~iY~G~E~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~frn~ 341 (344)
T d1ua7a2 289 VIASRSGSTPLFFSRPEGGGNGVRFPGKSQIGDRGSALFEDQAITAVNRFHNV 341 (344)
T ss_dssp HHHTSSSSEEEEECCCTTCBTTBSCCSSCBTBSCCCGGGGCHHHHHHHHHHHH
T ss_pred HHHHhCCCeEEEEechhccCCCCCCCccccCCCCcccccccHHHHHHHHHHhh
Confidence 999887 99999999998632 1 123567889999976
|
| >d1jaea2 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Animal alpha-amylase species: Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]
Probab=100.00 E-value=1.5e-57 Score=448.40 Aligned_cols=311 Identities=20% Similarity=0.288 Sum_probs=231.2
Q ss_pred eeeeccCceeEEEeeecCCCCCCcHHHHHhhhh-hHHHcCCCEEEeCCCCCCCC------CCCcccccCCCCCCCCCCHH
Q 014892 21 RAVIRNGREILFQGFNWESCKHDWWRNLERKVP-DISKSGFTSVWLPPATHSFA------PEGYLPQNLYSLNSSYGSEH 93 (416)
Q Consensus 21 ~~~~~~~~~~~~q~f~~~~~~~G~~~gi~~~Ld-yLk~LGv~~I~L~Pi~~~~~------~~GY~~~d~~~id~~~Gt~~ 93 (416)
.|++++|+.||+|+|.|+ |++|+++|+ |||+||||+||||||.+++. ++||+|.|| +|+|+|||++
T Consensus 3 ~~~~~~~~~~i~~~f~W~------~~~i~~~~~~yl~~lG~tai~l~P~~e~~~~~~~~~~~~Y~~~dY-~id~~~Gt~~ 75 (378)
T d1jaea2 3 DANFASGRNSIVHLFEWK------WNDIADECERFLQPQGFGGVQISPPNEYLVADGRPWWERYQPVSY-IINTRSGDES 75 (378)
T ss_dssp CCCCCTTCEEEEEETTCC------HHHHHHHHHHTTTTTTEEEEECCCCSCBBCCTTCCGGGGGSBCCS-CSEETTEEHH
T ss_pred CCCCCCCCceEEEeccCc------HHHHHHHHHHHHHHhCCCEEEeCcccccCCCCCCCCccccCCccc-eeCCCCCCHH
Confidence 367899999999999998 999999998 89999999999999998752 478999995 8999999999
Q ss_pred HHHHHHHHHHHCCCEEEEEEccccCcCCCCCCCCc-ccccCCCC--------CCCCCC-ceecCCCCCCCCCCCCCCCCC
Q 014892 94 LLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGK-YNRYDGIP--------LSWDEH-AVTSCTGGLGNGSTGDNFHGV 163 (416)
Q Consensus 94 d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~-~~~f~~~~--------~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 163 (416)
|||+||++||++||+||||+|+||++..+++.... ...+.... .++... .+..+.+. .....+.+..+
T Consensus 76 df~~LV~~aH~~GI~VilDvV~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l 153 (378)
T d1jaea2 76 AFTDMTRRCNDAGVRIYVDAVINHMTGMNGVGTSGSSADHDGMNYPAVPYGSGDFHSPCEVNNYQDA--DNVRNCELVGL 153 (378)
T ss_dssp HHHHHHHHHHHTTCEEEEEECCSBCCSSCEEBTTSCEEBTTTTBBTTTTBCGGGBCCCCBCCCTTCH--HHHHHSBBTTB
T ss_pred HHHHHHHHHHhcCceeeeeecccccccccCCCccccccCCCcccCcCCCCCccccCCCCCcCCCCCc--ccccccccccc
Confidence 99999999999999999999999999988753321 10000000 001100 00001000 01123456789
Q ss_pred CcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcHHHHHHHHHhcCC------------ceEEEcccCCCCCCCC
Q 014892 164 PNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGARP------------IFSVGEYWDSCNYNSH 231 (416)
Q Consensus 164 ~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~~~~~~~~~~~~~------------~~~vgE~~~~~~~~~~ 231 (416)
||||++||+||++|++++++|+ ++||||||+|+|++++..+++++.+.++. .+++||+|+...-
T Consensus 154 ~Dln~~np~V~~~l~~~~~~w~-e~gvDGfR~Daa~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gE~~~~~~~--- 229 (378)
T d1jaea2 154 RDLNQGSDYVRGVLIDYMNHMI-DLGVAGFRVDAAKHMSPGDLSVIFSGLKNLNTDYGFADGARPFIYQEVIDLGGE--- 229 (378)
T ss_dssp CBBCTTSHHHHHHHHHHHHHHH-HTTCCEEEETTGGGSCHHHHHHHHHTCCCCCGGGTCCTTCCCEEEEECCCCSSS---
T ss_pred CccccCCHHHHHHHHHHHHHHH-HhCCCceeeeeecccCHHHHHHHHHhhhhhccccccccccccceeeehhccccc---
Confidence 9999999999999999999999 89999999999999999999999988651 4789999875311
Q ss_pred CCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHhcCc--hhhhhhhcCCCCCccccccCcceecccCCCCCCCCC
Q 014892 232 GLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKGQ--FWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQA 309 (416)
Q Consensus 232 ~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~p~~~~~fl~nHD~~R~~~ 309 (416)
. +..+. .....++++|++...+..++.+. ...+..... ......+..+++|++|||++|+.+
T Consensus 230 ---~--------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~v~Fl~NHD~~R~~~ 293 (378)
T d1jaea2 230 ---A--------ISKNE--YTGFGCVLEFQFGVSLGNAFQGGNQLKNLANWGP---EWGLLEGLDAVVFVDNHDNQRTGG 293 (378)
T ss_dssp ---S--------CCGGG--TTTSSEEECHHHHHHHHHHHTTTSCGGGGGGCSG---GGTCCCGGGEEECSCCTTHHHHSC
T ss_pred ---c--------ccchh--ccccchhcchhhhhhhhhhhccCccHHHHHHHhh---hhccCCccceeEeeccCCCCCcCC
Confidence 0 00110 12356889999988888887432 333322111 111123457899999999999754
Q ss_pred CC---CCChhhHHHHHHHHhcCC-CeeEEecCCcCC----------------------------CchhH-HHHHHHHHHH
Q 014892 310 HW---PFPSNHIMEGYAYILMHP-GIPSVFYDHFYD----------------------------WGDSI-HNQIVKLMDV 356 (416)
Q Consensus 310 ~~---~~~~~~~~~a~a~llt~p-GiP~Iy~G~E~g----------------------------w~~~l-~~~~~~Li~l 356 (416)
.. ..+.++.++|+|+|||+| |+|+||+|.|+. |.++. .+.||.|+++
T Consensus 294 ~~~~~~~~~~~~~lA~af~lt~p~G~P~iy~g~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~w~~~~r~~~i~~m~~f 373 (378)
T d1jaea2 294 SQILTYKNPKPYKMAIAFMLAHPYGTTRIMSSFDFTDNDQGPPQDGSGNLISPGINDDNTCSNGYVCEHRWRQVYGMVGF 373 (378)
T ss_dssp TTCCCTTSHHHHHHHHHHHHHSCSSEEEEEECBCCSSTTCCCCBCTTSCBCCCEECTTSCEETTBCCGGGSHHHHHHHHH
T ss_pred CcccccCCHHHHHHHHHHHHHcCCCEEEEEeccccCCCCCCCCCCCCCCCCCCCcCccCCCCCHHHHHHHHHHHHHHHHH
Confidence 32 235678899999999999 999999999862 44343 5789999999
Q ss_pred HHhC
Q 014892 357 RRQQ 360 (416)
Q Consensus 357 R~~~ 360 (416)
|++-
T Consensus 374 rn~~ 377 (378)
T d1jaea2 374 RNAV 377 (378)
T ss_dssp HHHT
T ss_pred hccC
Confidence 9863
|
| >d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Glycosyltrehalose trehalohydrolase, central domain species: Deinococcus radiodurans [TaxId: 1299]
Probab=100.00 E-value=1.8e-57 Score=453.74 Aligned_cols=318 Identities=14% Similarity=0.136 Sum_probs=217.2
Q ss_pred cCceeEEEeeecCCCCCCcHHHHHhhhhhHHHcCCCEEEeCCCCCCC--CCCCcccccCCCCCCCCCCHHHHHHHHHHHH
Q 014892 26 NGREILFQGFNWESCKHDWWRNLERKVPDISKSGFTSVWLPPATHSF--APEGYLPQNLYSLNSSYGSEHLLKALLHKMK 103 (416)
Q Consensus 26 ~~~~~~~q~f~~~~~~~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~--~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH 103 (416)
-.+.||||++.+++..+|||+||++||||||+||||+||||||++++ .+|||+|.||++|||+||+++||++||++||
T Consensus 14 ~~~~viYe~~~~~f~~~Gd~~g~~~~ldyl~~LGv~~i~L~Pv~~~~~~~~~GY~~~d~~~vdp~~G~~~d~~~lv~~aH 93 (420)
T d2bhua3 14 LADCVFYEVHVGTFTPEGTYRAAAEKLPYLKELGVTAIQVMPLAAFDGQRGWGYDGAAFYAPYAPYGRPEDLMALVDAAH 93 (420)
T ss_dssp GGGCCEEEECHHHHSSSCSHHHHHHTHHHHHHHTCCEEEECCCEECSSSCCCSTTCCEEEEECGGGCCHHHHHHHHHHHH
T ss_pred ccccEEEEEehhhcCCCCCHHHHHHhHHHHHHcCCCEEEeCCCCcCCCCCCCCCCcccCCCcCcccCCHHHHHHHHHHHH
Confidence 34689999999999999999999999999999999999999998755 5799999999999999999999999999999
Q ss_pred HCCCEEEEEEccccCcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHH
Q 014892 104 QHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRW 183 (416)
Q Consensus 104 ~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~ 183 (416)
++||+||||+|+||++.+++|+... . +..|.. .+. ....||||+.||+|+++|++++++
T Consensus 94 ~~gi~VilD~V~NH~~~~~~~~~~~----~--~~~~~~----~~~-----------~~~~~dlN~~np~v~~~~~~~~~~ 152 (420)
T d2bhua3 94 RLGLGVFLDVVYNHFGPSGNYLSSY----A--PSYFTD----RFS-----------SAWGMGLDYAEPHMRRYVTGNARM 152 (420)
T ss_dssp HTTCEEEEEECCSCCCSSSCCHHHH----C--GGGEEE----EEE-----------CSSSEEECTTSHHHHHHHHHHHHH
T ss_pred hccccccccccccccCCCCcccccc----c--cccccc----ccc-----------ccccccccccChHHHHHHHHHhhe
Confidence 9999999999999999998864211 0 000100 000 122589999999999999999999
Q ss_pred HHHhcCCCeEEecccCCCcH----HHHHHHHHhcC---C-ceEEEcccCCCCC---CCCCCCCccchhhHhHhhhhccCC
Q 014892 184 LRNTVGFQDFRFDFARGYSA----KYVKEYIEGAR---P-IFSVGEYWDSCNY---NSHGLDYNQDSHRQRIINWIDGTG 252 (416)
Q Consensus 184 w~~~~gvDGfRlD~a~~~~~----~~~~~~~~~~~---~-~~~vgE~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~ 252 (416)
|++++||||||||+|++++. .+++++.+.++ | .+++||.|...+- ...............+..+.....
T Consensus 153 Wl~~~GVDGfR~D~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (420)
T d2bhua3 153 WLRDYHFDGLRLDATPYMTDDSETHILTELAQEIHELGGTHLLLAEDHRNLPDLVTVNHLDGIWTDDFHHETRVTLTGEQ 232 (420)
T ss_dssp HHHHHCCSEEEETTGGGCCCCSSSCHHHHHHHHHHTTCSCCEEEEECSSCCTHHHHTTCCSEEECTHHHHHHHHHHHCCC
T ss_pred eeecccccEEEEeeeeeeccccccccHHHHHHHHHhhcCCceeeecccCCchhhhcccccccccccccchhhhhcccccc
Confidence 99999999999999998864 57777776653 4 6889999875321 000000000001112222211111
Q ss_pred -CcccccCchhhHHHHHHh-cCch-----hhh-hhhcCCCCCccccccCcceecccCCCCC-------CCCCCCCCChhh
Q 014892 253 -QLSAAFDFTTKGILQEAV-KGQF-----WRL-RDAQGKPPGVMGWWPSRAVTFLDNHDTG-------STQAHWPFPSNH 317 (416)
Q Consensus 253 -~~~~~fdf~~~~~l~~~~-~~~~-----~~~-~~~~~~~~~~~~~~p~~~~~fl~nHD~~-------R~~~~~~~~~~~ 317 (416)
.....+. .....+...+ .+.. ... ..................++|++|||+. |..........+
T Consensus 233 ~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~nHD~~~~~~~~~r~~~~~~~~~~~ 311 (420)
T d2bhua3 233 EGYYAGYR-GGAEALAYTIRRGWRYEGQFWAVKGEEHERGHPSDALEAPNFVYCIQNHDQIGNRPLGERLHQSDGVTLHE 311 (420)
T ss_dssp SGGGGGCC-CSHHHHHHHHHHSSSCEEEEECCTTCCEEEECCCTTCCGGGEEEESCCHHHHHTSTTCCCGGGSTTCCHHH
T ss_pred cccccccc-hhhHHHHHHHhhccccccchhhhhchhhhhcccccccchhheeeeecccccccccccccccccchhhhHHH
Confidence 1111111 1122222221 1100 000 0000000000001122568999999972 222222335567
Q ss_pred HHHHHHHHhcCCCeeEEecCCcCCCc------------------------------------------------------
Q 014892 318 IMEGYAYILMHPGIPSVFYDHFYDWG------------------------------------------------------ 343 (416)
Q Consensus 318 ~~~a~a~llt~pGiP~Iy~G~E~gw~------------------------------------------------------ 343 (416)
+++|++++||+||+|+||||||+|.+
T Consensus 312 ~k~a~~~llt~pG~P~iy~GdEig~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~ 391 (420)
T d2bhua3 312 YRGAAALLLTLPMTPLLFQGQEWAASTPFQFFSDHAGELGQAVSEGRKKEFGGFSGFSGEDVPDPQAEQTFLNSKLNWAE 391 (420)
T ss_dssp HHHHHHHHHHSSSEEEEETTGGGTCSSCCCCCCCCCHHHHHHHHHHHHHHC---------CCCCTTSHHHHHTTSCCSGG
T ss_pred HHHHHHHHHhCCCCCEEeCChhhCCCCCccccccccchhhccccccccccccCCCccccccCCCcccccccccccCCHHH
Confidence 89999999999999999999997511
Q ss_pred ------hhHHHHHHHHHHHHHhCcccCC
Q 014892 344 ------DSIHNQIVKLMDVRRQQDIHSR 365 (416)
Q Consensus 344 ------~~l~~~~~~Li~lR~~~~~l~~ 365 (416)
.+++++||+||+|||++|+|++
T Consensus 392 ~~~~~~~~~~~~yr~Li~lRk~~p~l~~ 419 (420)
T d2bhua3 392 REGGEHARTLRLYRDLLRLRREDPVLHN 419 (420)
T ss_dssp GGSHHHHHHHHHHHHHHHHHHHCTTTTC
T ss_pred hcccCcHHHHHHHHHHHHHHhcCHHHhC
Confidence 2689999999999999999985
|
| >d1g94a2 c.1.8.1 (A:1-354) Bacterial alpha-amylase {Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]
Probab=100.00 E-value=2e-56 Score=436.52 Aligned_cols=306 Identities=18% Similarity=0.296 Sum_probs=224.2
Q ss_pred ceeEEEeeecCCCCCCcHHHHHhhh-hhHHHcCCCEEEeCCCCCCCC----CCCcccccCCCCCCCCCCHHHHHHHHHHH
Q 014892 28 REILFQGFNWESCKHDWWRNLERKV-PDISKSGFTSVWLPPATHSFA----PEGYLPQNLYSLNSSYGSEHLLKALLHKM 102 (416)
Q Consensus 28 ~~~~~q~f~~~~~~~G~~~gi~~~L-dyLk~LGv~~I~L~Pi~~~~~----~~GY~~~d~~~id~~~Gt~~d~~~Lv~~a 102 (416)
+-+|+|+|.|. ++.|.+++ +|||+||||+||||||+++++ ||||+|+| |+|+|+|||++|||+||++|
T Consensus 2 ~~~~~~~f~w~------~~~i~~~~~dyl~~lG~tai~l~P~~~~~~~~~~y~gY~~~d-y~vd~~~Gt~~dfk~LV~~a 74 (354)
T d1g94a2 2 PTTFVHLFEWN------WQDVAQECEQYLGPKGYAAVQVSPPNEHITGSQWWTRYQPVS-YELQSRGGNRAQFIDMVNRC 74 (354)
T ss_dssp CCCEEEETTCC------HHHHHHHHHHTHHHHTCCEEEECCCSCBBCSSSGGGGGSBSC-SCSCBTTBCHHHHHHHHHHH
T ss_pred CcceEEcccCC------HHHHHHHHHHHHHHcCCCEEEeCcCccCCCCCCCcccCCCCc-ceeCCCCCCHHHHHHHHHHH
Confidence 35799999998 99998887 799999999999999999864 58999999 58999999999999999999
Q ss_pred HHCCCEEEEEEccccCcCCCCCCCCcccccCCC-----CCCCCCCceecCCCC--CCCCCCCCCCCCCCcCCCCCHHHHH
Q 014892 103 KQHKVRAMADIVINHRVGTTQGHGGKYNRYDGI-----PLSWDEHAVTSCTGG--LGNGSTGDNFHGVPNIDHTQHFVRK 175 (416)
Q Consensus 103 H~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~~-----~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~dln~~~~~v~~ 175 (416)
|++||+||||+|+||++.++++.......+... ..+++..+.....+. .......+.+.++||||++||+||+
T Consensus 75 H~~GI~VilDvV~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dln~~n~~Vr~ 154 (354)
T d1g94a2 75 SAAGVDIYVDTLINHMAAGSGTGTAGNSFGNKSFPIYSPQDFHESCTINNSDYGNDRYRVQNCELVGLADLDTASNYVQN 154 (354)
T ss_dssp HHTTCEEEEEEECSEECSSCEEBTTSCEEBTTBCSSCCGGGBCCCCBCCTTHHHHCHHHHHHSBSTTCEEBCTTSHHHHH
T ss_pred hccCceeEEEeeccccccccCCCcccccccccCCCcCCccccccCCCCCCccccccccceeccccCCCCccccCCHHHHH
Confidence 999999999999999999887543221111110 011111110000000 0000123456789999999999999
Q ss_pred HHHHHHHHHHHhcCCCeEEecccCCCcHHHHHHHHHhcCC-ceEEEcccCCCCCCCCCCCCccchhhHhHhhhhccCCCc
Q 014892 176 DIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGARP-IFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQL 254 (416)
Q Consensus 176 ~l~~~~~~w~~~~gvDGfRlD~a~~~~~~~~~~~~~~~~~-~~~vgE~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 254 (416)
+|++++++|+ ++||||||+|+|+++++++|+++.+.+++ .++++|.|...+- ...+ ..+. ..
T Consensus 155 ~l~d~~~~~~-e~gvdGfR~Da~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~---~~~~---------~~~~----~~ 217 (354)
T d1g94a2 155 TIAAYINDLQ-AIGVKGFRFDASKHVAASDIQSLMAKVNGSPVVFQEVIDQGGE---AVGA---------SEYL----ST 217 (354)
T ss_dssp HHHHHHHHHH-HHTCCEEEEETGGGSCHHHHHHHHHTSCSCCEEEECCCCSSCC---SSCG---------GGGG----GG
T ss_pred HHHHHHHHhh-hhccchhhccchhhCCHHHHHHHHhhhcccceeEEEEeccCcc---cccc---------hhhc----CC
Confidence 9999999998 79999999999999999999999999886 6789999876321 0000 0111 23
Q ss_pred ccccCchhhHHHHHHhc-CchhhhhhhcCCCCCccccccCcceecccCCCCCCCCCCCCC-----ChhhHHHHHHHHhcC
Q 014892 255 SAAFDFTTKGILQEAVK-GQFWRLRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPF-----PSNHIMEGYAYILMH 328 (416)
Q Consensus 255 ~~~fdf~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~fl~nHD~~R~~~~~~~-----~~~~~~~a~a~llt~ 328 (416)
..++++.+...+..++. +....+.. ... ......|.++++|++|||++|+.+.... ..++.++|+++||++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~--~~~~~~~~~~v~Fl~NHD~~R~~~~~~~~~~~~~~~~~~lA~afil~~ 294 (354)
T d1g94a2 218 GLVTEFKYSTELGNTFRNGSLAWLSN-FGE--GWGFMPSSSAVVFVDNHDNQRGHGGAGNVITFEDGRLYDLANVFMLAY 294 (354)
T ss_dssp SEEECHHHHHHHHHHHHHSCGGGGGG-TTG--GGTCCCGGGEEECSCCTTGGGTSSCCTTSCCGGGTHHHHHHHHHHHHS
T ss_pred CcccchhhcchhhhHhhhhhHHHHHH-Hhh--hhccCCccceEEeecccccccccccCcccccccchHHHHHHHHHHHHc
Confidence 46788887777777663 43333322 111 1112335588999999999998764432 345788999999999
Q ss_pred C-CeeEEecCCcCC------------------------CchhH-HHHHHHHHHHHHhC
Q 014892 329 P-GIPSVFYDHFYD------------------------WGDSI-HNQIVKLMDVRRQQ 360 (416)
Q Consensus 329 p-GiP~Iy~G~E~g------------------------w~~~l-~~~~~~Li~lR~~~ 360 (416)
| |+|+||||+||+ |.++. .+.||.||++|+..
T Consensus 295 p~G~P~iyyG~ef~~~~~~~~~~~~~~~~~~~~~~~~~W~~~hr~~~i~~mi~fr~~~ 352 (354)
T d1g94a2 295 PYGYPKVMSSYDFHGDTDAGGPNVPVHNNGNLECFASNWKCEHRWSYIAGGVDFRNNT 352 (354)
T ss_dssp CSSEEEEEECBCCTTCTTCCCCSSCSEETTEECBSSSSBCCGGGSHHHHHHHHHHHHS
T ss_pred CCCEEEEEeecCcCCCCcCCCCCCCccCCCCCCcCCCCchhhhhHHHHHHHHHhhccc
Confidence 8 999999999984 32222 47799999999875
|
| >d1ji1a3 c.1.8.1 (A:123-554) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAI [TaxId: 2026]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltogenic amylase, central domain species: Thermoactinomyces vulgaris, TVAI [TaxId: 2026]
Probab=100.00 E-value=1.4e-57 Score=455.70 Aligned_cols=301 Identities=18% Similarity=0.244 Sum_probs=210.7
Q ss_pred CcHHHHHhhhhhHHH-cCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCC----CEEEEEEcccc
Q 014892 43 DWWRNLERKVPDISK-SGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHK----VRAMADIVINH 117 (416)
Q Consensus 43 G~~~gi~~~LdyLk~-LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~G----i~VilD~V~NH 117 (416)
|||+||++||||||+ ||||+||||||++++++|||+|.||++|||+|||++||++||++||++| |+||||+|+||
T Consensus 66 Gdl~Gi~~kLdYl~~~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~lv~~~H~~g~~~~I~VilD~V~NH 145 (432)
T d1ji1a3 66 GDLAGIDQKLGYIKKTLGANILYLNPIFKAPTNHKYDTQDYMAVDPAFGDNSTLQTLINDIHSTANGPKGYLILDGVFNH 145 (432)
T ss_dssp CCHHHHHHTHHHHHTTTCCCEEEESCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHCSSSSSCCEEEEEECCSB
T ss_pred cCHHHHHHHhhHHHhhcCCCEEEeCCCCcCCCCCCcccccccccCcccCCHHHHHHHHHHHHHhhhhcceeEeccccccc
Confidence 899999999999986 9999999999999999999999999999999999999999999999987 78999999999
Q ss_pred CcCCCCCCCCcccccCC-----CCCCCCCC-ceecCCCCCCCCCCCCCCCCCCcCCCCC--HHHHHHHHH----HHHHHH
Q 014892 118 RVGTTQGHGGKYNRYDG-----IPLSWDEH-AVTSCTGGLGNGSTGDNFHGVPNIDHTQ--HFVRKDIIA----WLRWLR 185 (416)
Q Consensus 118 ~~~~~~~~~~~~~~f~~-----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dln~~~--~~v~~~l~~----~~~~w~ 185 (416)
+|.+|+|+...-..... ....|... .....++.. .....+..+|++|+.| ++||+++++ ++++|+
T Consensus 146 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ln~~n~~~~v~~~~~~~~~~~~~~wl 222 (432)
T d1ji1a3 146 TGDSHPWFDKYNNFSSQGAYESQSSPWYNYYTFYTWPDSY---ASFLGFNSLPKLNYGNSGSAVRGVIYNNSNSVAKTYL 222 (432)
T ss_dssp CCTTSTTTCTTCCSSSCCTTTCTTCTTGGGBCEEETTTEE---CEETTEEEEEBBBCCSTTCHHHHHHTTSTTSHHHHHH
T ss_pred cCCCchhHhhccCccccccccccccccccccccccccccc---ccccccCccCccccCCCcHHHHHHHHHHHHHHHHHhh
Confidence 99999986532111110 00111100 011111100 1112346789999988 567766665 566554
Q ss_pred -HhcCCCeEEecccCCCcH-----------HHHHHHHHhcC---C-ceEEEcccCCCCCCCCCCCCccchhhHhHhhhhc
Q 014892 186 -NTVGFQDFRFDFARGYSA-----------KYVKEYIEGAR---P-IFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWID 249 (416)
Q Consensus 186 -~~~gvDGfRlD~a~~~~~-----------~~~~~~~~~~~---~-~~~vgE~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 249 (416)
+++||||||+|++++++. ++|+++.++++ | .+++||.|..... +..
T Consensus 223 ~~~~gvDGfR~D~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~igE~~~~~~~------------------~~~ 284 (432)
T d1ji1a3 223 NPPYSVDGWRLDAAQYVDANGNNGSDVTNHQIWSEFRNAVKGVNSNAAIIGEYWGNANP------------------WTA 284 (432)
T ss_dssp STTTCCCEEEETTGGGCBSTTCCCSSHHHHHHHHHHHHHHHHHCTTCEEEECCSSCCGG------------------GTT
T ss_pred hhhcCccceeeeceeeeccCCCCcccccchhHHHHHHHHHHhhCCCeEEEeeeccCccc------------------eec
Confidence 579999999999999864 58888877654 4 7889998865210 001
Q ss_pred cCCCcccccCchh-hHHHHHHhcCch----------hh---hhhhcCCCCCccccccCcceecccCCCCCCCCCCCCCCh
Q 014892 250 GTGQLSAAFDFTT-KGILQEAVKGQF----------WR---LRDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFPS 315 (416)
Q Consensus 250 ~~~~~~~~fdf~~-~~~l~~~~~~~~----------~~---~~~~~~~~~~~~~~~p~~~~~fl~nHD~~R~~~~~~~~~ 315 (416)
.......+.++.. ...+...+.+.. .. ....... ......+...++|++|||++|+.+.++.+.
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~f~~nHD~~R~~s~~~~~~ 362 (432)
T d1ji1a3 285 QGNQWDAATNFDGFTQPVSEWITGKDYQNNSASISTTQFDSWLRGTRA--NYPTNVQQSMMNFLSNHDITRFATRSGGDL 362 (432)
T ss_dssp TSSSCSEEBCTTTTHHHHHHHHTSBCTTSCBCCCCHHHHHHHHHHHHT--TSCHHHHTTCEEESCCTTSCCHHHHTTTCH
T ss_pred cccccchhhhhhhhhHHHHHHhhcchhhcccccccHHHHHHHHHHhHh--hcccccccccccccccCCccchhhhcCCHH
Confidence 1111223333322 112222221110 00 0110000 000112335789999999999988887677
Q ss_pred hhHHHHHHHHhcCCCeeEEecCCcCC--------------Cc-----hhHHHHHHHHHHHHHhCcccCCC
Q 014892 316 NHIMEGYAYILMHPGIPSVFYDHFYD--------------WG-----DSIHNQIVKLMDVRRQQDIHSRS 366 (416)
Q Consensus 316 ~~~~~a~a~llt~pGiP~Iy~G~E~g--------------w~-----~~l~~~~~~Li~lR~~~~~l~~G 366 (416)
.+.++|++++||+||+||||||+|+| |+ .++++++|+|++|||++|+|+.|
T Consensus 363 ~~~~~a~~~llt~pG~P~iyyGdE~G~~g~~d~~~R~~~~W~~~~~~~~l~~~~~~L~~lR~~~paL~~G 432 (432)
T d1ji1a3 363 WKTYLALIFQMTYVGTPTIYYGDEYGMQGGADPDNRRSFDWSQATPSNSAVALTQKLITIRNQYPALRTG 432 (432)
T ss_dssp HHHHHHHHHHTTSSSEEEEETTGGGTCCCCSTTGGGCCCCTTSSSTTSHHHHHHHHHHHHHHHCHHHHHS
T ss_pred HHHHHHHHHHHHcCCCcEEEcCHhhCCCCCCCcccccCCCCCcCCCchHHHHHHHHHHHHHhcCHHhhCC
Confidence 78999999999999999999999986 32 47999999999999999999876
|
| >d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Glycosyltrehalose trehalohydrolase, central domain species: Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]
Probab=100.00 E-value=7.3e-56 Score=438.52 Aligned_cols=315 Identities=17% Similarity=0.157 Sum_probs=213.2
Q ss_pred cCceeEEEeeecCCCCCCcHHHHHhhhhhHHHcCCCEEEeCCCCCCC--CCCCcccccCCCCCCCCCCHHHHHHHHHHHH
Q 014892 26 NGREILFQGFNWESCKHDWWRNLERKVPDISKSGFTSVWLPPATHSF--APEGYLPQNLYSLNSSYGSEHLLKALLHKMK 103 (416)
Q Consensus 26 ~~~~~~~q~f~~~~~~~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~--~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH 103 (416)
..+.||||++.+.++.+|||+||++||||||+||||+|||+||++++ ++|||+|.||++|+|+|||++|||+||++||
T Consensus 9 ~~~~viYe~~v~~f~~~Gd~~gi~~~ldyi~~LGv~~i~l~Pv~~~~~~~~~GY~~~d~~~vd~~~Gt~~dlk~lv~~~h 88 (400)
T d1eh9a3 9 KEDLIIYEIHVGTFTPEGTFEGVIRKLDYLKDLGITAIEIMPIAQFPGKRDWGYDGVYLYAVQNSYGGPEGFRKLVDEAH 88 (400)
T ss_dssp SSSCCEEEECTTTSSSSCSHHHHHHTHHHHHHHTCCEEEECCCBCCSSSCCCSTTCCCTTCBCSTTCCHHHHHHHHHHHH
T ss_pred CcCeEEEEEehhhhCCCCCHHHHHHHhHHHHHcCCCEEEeCCcCcCCCCCCCCCCCCCCCCcCcccCCHHHHHHHHHHHH
Confidence 44689999999999999999999999999999999999999999876 4799999999999999999999999999999
Q ss_pred HCCCEEEEEEccccCcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHH
Q 014892 104 QHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRW 183 (416)
Q Consensus 104 ~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~ 183 (416)
++||+||||+|+||+|.+|+|+......|.. ..++ + .......++++||+|+++|++++++
T Consensus 89 ~~gi~VilD~V~NH~s~~~~~~~~~~~~~~~--~~~~---------~--------~~~~~~~~~~~np~v~~~l~d~~~~ 149 (400)
T d1eh9a3 89 KKGLGVILDVVYNHVGPEGNYMVKLGPYFSQ--KYKT---------P--------WGLTFNFDDAESDEVRKFILENVEY 149 (400)
T ss_dssp HTTCEEEEEECCSCCCSSSCCHHHHSCCSCS--SCCC---------S--------SSCCCCSSSTTHHHHHHHHHHHHHH
T ss_pred hcCCceeeecccccccCCCcchhhhcccccc--cccc---------c--------cccccccccccccHHHHHHHHHHHH
Confidence 9999999999999999999875432111111 0000 0 0112234678899999999999999
Q ss_pred HHHhcCCCeEEecccCCC----cHHHHHHHHHhcC--CceEEEcccCCCCCCCCC---CCCc-----cchhhHhHhhhhc
Q 014892 184 LRNTVGFQDFRFDFARGY----SAKYVKEYIEGAR--PIFSVGEYWDSCNYNSHG---LDYN-----QDSHRQRIINWID 249 (416)
Q Consensus 184 w~~~~gvDGfRlD~a~~~----~~~~~~~~~~~~~--~~~~vgE~~~~~~~~~~~---~~~~-----~~~~~~~l~~~~~ 249 (416)
|++++||||||+|+|+++ +.++++++.+.++ ...+++|.+...+..... ..+. .......+..++.
T Consensus 150 Wl~~~gvDGfR~Daa~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (400)
T d1eh9a3 150 WIKEYNVDGFRLDAVHAIIDTSPKHILEEIADVVHKYNRIVIAESDLNDPRVVNPKEKCGYNIDAQWVDDFHHSIHAYLT 229 (400)
T ss_dssp HHHHSCCCCEEETTGGGCCCCSSSCHHHHHHHHHHHTTCCEEECCCSCCTTTTSCGGGTCCCCSEEECHHHHHHHHHHHS
T ss_pred HHhhcccceEEeechhhhcchhhhhhHHHHHHHHhhhhhhhhhhccccCccccchhhhccceeccccccccchhhHhhhc
Confidence 999999999999999988 4567777766553 134556644332210000 0000 0001122222222
Q ss_pred cCCCcccccCchhhHHHHHHh-cCch-----hhhhh-hcCCCCCccccccCcceecccCCCCCCCCCCC-----CCChhh
Q 014892 250 GTGQLSAAFDFTTKGILQEAV-KGQF-----WRLRD-AQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHW-----PFPSNH 317 (416)
Q Consensus 250 ~~~~~~~~fdf~~~~~l~~~~-~~~~-----~~~~~-~~~~~~~~~~~~p~~~~~fl~nHD~~R~~~~~-----~~~~~~ 317 (416)
.. ......++.....+...+ .... ..... ..+. ......+...++|++|||+.+..... ..+.++
T Consensus 230 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~f~~nHD~~~~~~~~~~~~~~~~~~~ 306 (400)
T d1eh9a3 230 GE-RQGYYTDFGNLDDIVKSYKDVFVYDGKYSNFRRKTHGE--PVGELDGCNFVVYIQNHDQVGNRGKGERIIKLVDRES 306 (400)
T ss_dssp CC-CSGGGGGCCSHHHHHHHHHSSCSCSSEEETTTTEEECC--CCCSCCGGGEECCSCCHHHHHTTTTCCCGGGGSCHHH
T ss_pred cc-ccchhhhhhhhHHHHHHhhhhhccchhHHHHHHHhccc--chhhhcccchhhhhhhccccccccchhhhHHHhhhhH
Confidence 11 111222222222222221 0000 00000 0000 00011233568999999986543221 113567
Q ss_pred HHHHHHHHhcCCCeeEEecCCcCCC------------------------------------------------chhHHHH
Q 014892 318 IMEGYAYILMHPGIPSVFYDHFYDW------------------------------------------------GDSIHNQ 349 (416)
Q Consensus 318 ~~~a~a~llt~pGiP~Iy~G~E~gw------------------------------------------------~~~l~~~ 349 (416)
.++|++++||+||+|+||||||+|. +.+++++
T Consensus 307 ~~~a~a~~l~~pGiP~iy~G~E~G~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (400)
T d1eh9a3 307 YKIAAALYLLSPYIPMIFMGEEYGEENPFYFFSDFSDSKLIQGVREGRKKENGQDTDPQDESTFNASKLSWKIDEEIFSF 386 (400)
T ss_dssp HHHHHHHHHSSSSCCEEESSGGGTCCCCCCCCCCCCSTTHHHHHHHHHHHHTCCCSCTTSHHHHHTTSCCCCCCHHHHHH
T ss_pred HHHHHHHHHhCCCCCEEECChhhCCCCCCCchhhcccHHHhhhhHhhhcCccCCCCCcccccccccccCCccCCHHHHHH
Confidence 8999999999999999999999862 1378999
Q ss_pred HHHHHHHHHhCcc
Q 014892 350 IVKLMDVRRQQDI 362 (416)
Q Consensus 350 ~~~Li~lR~~~~~ 362 (416)
+|+||+|||++|+
T Consensus 387 ~~~Li~lRk~~pv 399 (400)
T d1eh9a3 387 YKILIKMRKELSI 399 (400)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHhHCcC
Confidence 9999999999986
|
| >d1m53a2 c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Klebsiella sp., lx3 [TaxId: 576]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Isomaltulose synthase PalI species: Klebsiella sp., lx3 [TaxId: 576]
Probab=100.00 E-value=3.1e-56 Score=451.31 Aligned_cols=303 Identities=20% Similarity=0.258 Sum_probs=201.3
Q ss_pred eeeccCceeEEEeeecCCCCC-----CcHHHHHhhhhhHHHcCCCEEEeCCCCCCC-CCCCcccccCCCCCCCCCCHHHH
Q 014892 22 AVIRNGREILFQGFNWESCKH-----DWWRNLERKVPDISKSGFTSVWLPPATHSF-APEGYLPQNLYSLNSSYGSEHLL 95 (416)
Q Consensus 22 ~~~~~~~~~~~q~f~~~~~~~-----G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~-~~~GY~~~d~~~id~~~Gt~~d~ 95 (416)
|-+++ ++||||+|...++.. |||+||++||||||+||||+||||||++++ ++|||+|.||++|||+|||++||
T Consensus 3 P~W~~-~~viYei~~~~F~d~~~~~~Gd~~Gi~~kLdyLk~LGv~~I~L~Pi~~~~~~~~GY~~~d~~~vd~~~Gt~~df 81 (478)
T d1m53a2 3 PAWWK-EAVFYQIYPRSFKDTNDDGIGDIRGIIEKLDYLKSLGIDAIWINPHYDSPNTDNGYDISNYRQIMKEYGTMEDF 81 (478)
T ss_dssp CCHHH-HCCEEEECGGGTCCSSSSSSCCHHHHHHTHHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECGGGCCHHHH
T ss_pred Ccccc-cCeEEEEecchhcCCCCCCccCHHHHHHhhHHHHHcCCCEEEECCCCCCCCCCCCcCccCCCCcCcccCCHHHH
Confidence 34444 489999999887643 899999999999999999999999999985 68999999999999999999999
Q ss_pred HHHHHHHHHCCCEEEEEEccccCcCCCCCCCC-------cc----cccCCC----CCCC---CCCceecCCCCCCCCCCC
Q 014892 96 KALLHKMKQHKVRAMADIVINHRVGTTQGHGG-------KY----NRYDGI----PLSW---DEHAVTSCTGGLGNGSTG 157 (416)
Q Consensus 96 ~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~-------~~----~~f~~~----~~~~---~~~~~~~~~~~~~~~~~~ 157 (416)
++||++||++||+||||+|+||++..|+++.. .| .+..+. +..| ..................
T Consensus 82 ~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~f~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (478)
T d1m53a2 82 DSLVAEMKKRNMRLMIDVVINHTSDQHPWFIQSKSDKNNPYRDYYFWRDGKDNQPPNNYPSFFGGSAWQKDAKSGQYYLH 161 (478)
T ss_dssp HHHHHHHHHTTCEEEEEECCSBCCTTSHHHHHHHHCTTCTTGGGBCEECCSSSSCSSCCBCTTSSBSEEECTTTCCEEEC
T ss_pred HHHHHHHHHCCCEEEeccccccccccCchhhhcccCCCCCccccccccCCCcCCCCccccccCCCCccccccccCccccc
Confidence 99999999999999999999999999875321 11 111110 0000 000000011111111223
Q ss_pred CCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCc--------------------------HHHHHHHHH
Q 014892 158 DNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYS--------------------------AKYVKEYIE 211 (416)
Q Consensus 158 ~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~--------------------------~~~~~~~~~ 211 (416)
.....+||+|+++|+|+++|++++++|+ ++||||||+|+|+++. ..+++++..
T Consensus 162 ~~~~~~~dln~~~~~V~~~i~~~~~~w~-e~gvDGfR~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (478)
T d1m53a2 162 YFARQQPDLNWDNPKVREDLYAMLRFWL-DKGVSGMRFDTVATYSKIPGFPNLTPEQQKNFAEQYTMGPNIHRYIQEMNR 240 (478)
T ss_dssp SSCTTCCBBCTTSHHHHHHHHHHHHHHH-TTTCCEEEETTGGGSSCCTTCCCCCHHHHHTHHHHTTCCTTHHHHHHHHHH
T ss_pred CcCCCCCcccchhHHHHHHHHHHHHHHH-hcCCceeccccceeecccccccccchhhhhccchhhccchhHHHHHHHHHH
Confidence 3457889999999999999999999999 8999999999998764 135555555
Q ss_pred hcC---CceEEEcccCCCCCCCCCCCCccchhhHhHhhhhccC-CCcccccCchhhHHHHHHh---c-C--chhhhhhhc
Q 014892 212 GAR---PIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGT-GQLSAAFDFTTKGILQEAV---K-G--QFWRLRDAQ 281 (416)
Q Consensus 212 ~~~---~~~~vgE~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~fdf~~~~~l~~~~---~-~--~~~~~~~~~ 281 (416)
.+. +.+++||.|.... .....+.+.. ......|+|.+........ . . ....+.+..
T Consensus 241 ~~~~~~~~~~~~e~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (478)
T d1m53a2 241 KVLSRYDVATAGEIFGVPL--------------DRSSQFFDRRRHELNMAFMFDLIRLDRDSNERWRHKSWSLSQFRQII 306 (478)
T ss_dssp HTGGGSCCEEEEECTTCCG--------------GGTHHHHCGGGCSCSEEECCTTTTTTBCSSCTTCBCCCCHHHHHHHH
T ss_pred HHhhccccceeeeecCCCH--------------HHHHhhhcccCCccccccchhhhhhhhhhhhhhccccccHHHHHHHH
Confidence 442 4678999886521 1222232221 1233444444321111100 0 0 011111100
Q ss_pred CCCCCccccccCcceecccCCCCCCCCCCCCCC-----hhhHHHHHHHHhcCCCeeEEecCCcCC
Q 014892 282 GKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFP-----SNHIMEGYAYILMHPGIPSVFYDHFYD 341 (416)
Q Consensus 282 ~~~~~~~~~~p~~~~~fl~nHD~~R~~~~~~~~-----~~~~~~a~a~llt~pGiP~Iy~G~E~g 341 (416)
....... ........|++|||++|+.+.++.. ..+.++|++++||+||+||||||+|+|
T Consensus 307 ~~~~~~~-~~~~~~~~~~~nhd~~R~~~~~~~~~~~~~~~~~~~~~~lllt~pGiP~iyyGdEiG 370 (478)
T d1m53a2 307 SKMDVTV-GKYGWNTFFLDNHDNPRAVSHFGDDRPQWREASAKALATITLTQRATPFIYQGSELG 370 (478)
T ss_dssp HHHHHHH-TTTCCBEECSCCTTSCCHHHHHSCCSTTTHHHHHHHHHHHHTSSSSEEEEETTTTTT
T ss_pred HHHHhhh-cccccceeeccCCCCcccccccCCchHHHHHHHHHHHHHHHHhCCCCCEEecccccC
Confidence 0000000 0112456899999999976654322 345778899999999999999999986
|
| >d1hx0a2 c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Animal alpha-amylase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=100.00 E-value=1.9e-55 Score=436.78 Aligned_cols=294 Identities=20% Similarity=0.276 Sum_probs=214.7
Q ss_pred eeeeccCceeEEEeeecCCCCCCcHHHHHhhh-hhHHHcCCCEEEeCCCCCCCC--------CCCcccccCCCCCCCCCC
Q 014892 21 RAVIRNGREILFQGFNWESCKHDWWRNLERKV-PDISKSGFTSVWLPPATHSFA--------PEGYLPQNLYSLNSSYGS 91 (416)
Q Consensus 21 ~~~~~~~~~~~~q~f~~~~~~~G~~~gi~~~L-dyLk~LGv~~I~L~Pi~~~~~--------~~GY~~~d~~~id~~~Gt 91 (416)
.|+.+.|++||+|+|+|+ |++|.+++ +||++||||+|||||+.++.. +|||+|+| |+|+|+|||
T Consensus 3 ~p~~~~g~~~i~~~f~w~------~~~i~~e~~~yL~~lG~taIwl~P~~e~~~~~~~~~~~y~gY~~~d-Y~v~~~~Gt 75 (403)
T d1hx0a2 3 APQTQSGRTSIVHLFEWR------WVDIALECERYLGPKGFGGVQVSPPNENIVVTNPSRPWWERYQPVS-YKLCTRSGN 75 (403)
T ss_dssp SCCCCTTCCEEEEETTCC------HHHHHHHHHHTTTTTTCCEEEECCCSCBBCCTTTTSCGGGGGSBSC-SCSCBTTBC
T ss_pred CCCCCCCCeeEEEeecCc------HHHHHHHHHHHHHHhCCCEEEeCcCccCccCCCCCCCCceeecCCC-CccCCCCCC
Confidence 477889999999999998 99998775 799999999999999998631 58999999 689999999
Q ss_pred HHHHHHHHHHHHHCCCEEEEEEccccCcCCCCCCCCcccc---cCC-----CCCCCCCCce----ecCCCCCCCC-----
Q 014892 92 EHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNR---YDG-----IPLSWDEHAV----TSCTGGLGNG----- 154 (416)
Q Consensus 92 ~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~---f~~-----~~~~~~~~~~----~~~~~~~~~~----- 154 (416)
++|||+||++||++||+||||+|+||++.++++....... +.. ....+..... +.........
T Consensus 76 ~~dfk~Lv~~aH~~GI~VIlDvV~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (403)
T d1hx0a2 76 ENEFRDMVTRCNNVGVRIYVDAVINHMCGSGAAAGTGTTCGSYCNPGNREFPAVPYSAWDFNDGKCKTASGGIESYNDPY 155 (403)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSEEEETTCCCBSCBSSCCCBBGGGTBBTTTTBCGGGBCTTTCCSTTSBCCCTTCHH
T ss_pred HHHHHHHHHHHHhcCCEEEEEEecccccccccccccccccCcccccccccCCCCCCCCccCCCCcccCCCCCccccCCcc
Confidence 9999999999999999999999999999998865321100 000 0000110000 0000000000
Q ss_pred -CCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcHHHHHHHHHhcC-----------CceEEEcc
Q 014892 155 -STGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGAR-----------PIFSVGEY 222 (416)
Q Consensus 155 -~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~~~~~~~~~~~~-----------~~~~vgE~ 222 (416)
...+++..+||||++||+||+++++++++|+ ++||||||+|++++++.++|+++...++ ..+++||+
T Consensus 156 ~~~~~~l~~~pDLn~~np~Vr~~~~~~l~~~~-~~GvdGfR~Da~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~ 234 (403)
T d1hx0a2 156 QVRDCQLVGLLDLALEKDYVRSMIADYLNKLI-DIGVAGFRIDASKHMWPGDIKAVLDKLHNLNTNWFPAGSRPFIFQEV 234 (403)
T ss_dssp HHHHSBGGGEEEBCTTSHHHHHHHHHHHHHHH-HHTCCEEEETTGGGSCHHHHHHHHTTCCCCCTTTSCTTCCCEEEECC
T ss_pred ceeeccccccCcccCCCHHHHHHHHHHHHHHH-HcCCCccccccccccCHHHHHHHHHHHHhhCcccccccCCceEEEEE
Confidence 1123456789999999999999999999999 8999999999999999999999998764 14789998
Q ss_pred cCCCCCCCCCCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHhcCc---hhhhhhhcCCCCCccccccCcceecc
Q 014892 223 WDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKGQ---FWRLRDAQGKPPGVMGWWPSRAVTFL 299 (416)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~p~~~~~fl 299 (416)
+..... .+..+. ..+..++++|++...+...+.+. .......+.. ......|..+++||
T Consensus 235 ~~~~~~--------------~~~~~~--~~~~~~~~df~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~v~Fl 296 (403)
T d1hx0a2 235 IDLGGE--------------AIKSSE--YFGNGRVTEFKYGAKLGTVVRKWSGEKMSYLKNWGE--GWGFMPSDRALVFV 296 (403)
T ss_dssp CCCSSS--------------SSCGGG--GTTTSEEECHHHHHHHHHHHTTCTTCCGGGGGGTTG--GGTCCCGGGEEECS
T ss_pred eccCcc--------------hhhccc--ccCCCccccccccchhhHHHhhccchhHHHHHHhcc--ccccCCccceEEec
Confidence 865311 000110 02356789999988888887432 2222222221 11123356889999
Q ss_pred cCCCCCCCCCCCCC------ChhhHHHHHHHHhcCC-CeeEEecCCcC
Q 014892 300 DNHDTGSTQAHWPF------PSNHIMEGYAYILMHP-GIPSVFYDHFY 340 (416)
Q Consensus 300 ~nHD~~R~~~~~~~------~~~~~~~a~a~llt~p-GiP~Iy~G~E~ 340 (416)
+|||++|+.+..+. +.+++++|+++|||+| |+|+||||.|+
T Consensus 297 ~NHD~~R~~~~~~~~~~~~~~~~~~~~a~af~lt~p~G~P~iy~gy~~ 344 (403)
T d1hx0a2 297 DNHDNQRGHGAGGSSILTFWDARLYKIAVGFMLAHPYGFTRVMSSYRW 344 (403)
T ss_dssp CCTTGGGTCSSCGGGCCCGGGHHHHHHHHHHHHHSCSSEEEEEECBCC
T ss_pred ccCCCcccccCCCccccccccHHHHHHHHHHHHHCCCCccceEeeecc
Confidence 99999998876432 3357899999999999 99999888775
|
| >d1uoka2 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Oligo-1,6, glucosidase species: Bacillus cereus [TaxId: 1396]
Probab=100.00 E-value=1.6e-55 Score=446.08 Aligned_cols=299 Identities=17% Similarity=0.229 Sum_probs=198.7
Q ss_pred CceeEEEeeecCCCCC-----CcHHHHHhhhhhHHHcCCCEEEeCCCCCCCC-CCCcccccCCCCCCCCCCHHHHHHHHH
Q 014892 27 GREILFQGFNWESCKH-----DWWRNLERKVPDISKSGFTSVWLPPATHSFA-PEGYLPQNLYSLNSSYGSEHLLKALLH 100 (416)
Q Consensus 27 ~~~~~~q~f~~~~~~~-----G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~-~~GY~~~d~~~id~~~Gt~~d~~~Lv~ 100 (416)
.++||||+|...+... |||+||++||||||+||||+||||||+++++ +|||+++||++|||+|||++||++||+
T Consensus 7 ~~~viYei~~~~F~d~~~~~~Gd~~gi~~kLdYLk~LGv~~I~l~Pi~~~~~~~~GY~~~d~~~vd~~~Gt~~df~~Lv~ 86 (479)
T d1uoka2 7 KESVVYQIYPRSFMDSNGDGIGDLRGIISKLDYLKELGIDVIWLSPVYESPNDDNGYDISDYCKIMNEFGTMEDWDELLH 86 (479)
T ss_dssp HHCCEEEECGGGTCCSSSSSSCCHHHHHTTHHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECGGGCCHHHHHHHHH
T ss_pred ccCeEEEEEcchhcCCCCCCCcCHHHHHHhhHHHHHcCCCEEEECCCcCCCCCCCCcCccccCCcCcccCCHHHHHHHHH
Confidence 3489999999988643 8999999999999999999999999999864 899999999999999999999999999
Q ss_pred HHHHCCCEEEEEEccccCcCCCCCCCC-------cc---cccCC-----CCCCCCCCc---eecCCCCCCCCCCCCCCCC
Q 014892 101 KMKQHKVRAMADIVINHRVGTTQGHGG-------KY---NRYDG-----IPLSWDEHA---VTSCTGGLGNGSTGDNFHG 162 (416)
Q Consensus 101 ~aH~~Gi~VilD~V~NH~~~~~~~~~~-------~~---~~f~~-----~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 162 (416)
+||++||+||||+|+||++.+++++.. .+ ..+.. .+..|.... ...............+...
T Consensus 87 ~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (479)
T d1uoka2 87 EMHERNMKLMMDLVVNHTSDEHNWFIESRKSKDNKYRDYYIWRPGKEGKEPNNWGAAFSGSAWQYDEMTDEYYLHLFSKK 166 (479)
T ss_dssp HHHHTTCEEEEEECCSBCCTTSHHHHHHTTCTTCTTGGGBCEECCSSSSCSSCBBCTTSSBSEEEETTTTEEEECSSCTT
T ss_pred HHHHCCCEEEecccccccccccchhhhhhhccCCccccceeccccccCcCcCCccccCCCCccccccccCcceecccCCC
Confidence 999999999999999999999875321 11 11110 000010000 0000000011112234578
Q ss_pred CCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCc----------------------------HHHHHHHHHhcC
Q 014892 163 VPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYS----------------------------AKYVKEYIEGAR 214 (416)
Q Consensus 163 ~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~----------------------------~~~~~~~~~~~~ 214 (416)
+|++|+++|+||++|++++++|+ ++||||||+|+|+++. ..+++++.+.+.
T Consensus 167 ~~dln~~~~~v~~~i~~~~~~W~-e~gvDGfR~D~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (479)
T d1uoka2 167 QPDLNWDNEKVRQDVYEMMKFWL-EKGIDGFRMDVINFISKEEGLPTVETEEEGYVSGHKHFMNGPNIHKYLHEMNEEVL 245 (479)
T ss_dssp SCBBCTTSHHHHHHHHHHHHHHH-HTTCCEEEETTGGGSCCCTTCCCCCCCCSSCBCCGGGTTTCTTHHHHHHHHHHHTG
T ss_pred ccccccCCHHHHHHHHHHHHHHH-HcCCCCcccccceeeeccccCcccccccccccccchhhccChhHHHHHHHHHHHHH
Confidence 99999999999999999999998 7999999999998874 235566665543
Q ss_pred ---CceEEEcccCCCCCCCCCCCCccchhhHhHhhhhccC-CCcccccCchhhHHHHHHh---c---CchhhhhhhcCCC
Q 014892 215 ---PIFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGT-GQLSAAFDFTTKGILQEAV---K---GQFWRLRDAQGKP 284 (416)
Q Consensus 215 ---~~~~vgE~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~fdf~~~~~l~~~~---~---~~~~~~~~~~~~~ 284 (416)
+.++++|.+... ...+..+.... .....+|+|.......... . .....+.......
T Consensus 246 ~~~~~~~~~e~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (479)
T d1uoka2 246 SHYDIMTVGEMPGVT--------------TEEAKLYTGEERKELQMVFQFEHMDLDSGEGGKWDVKPCSLLTLKENLTKW 311 (479)
T ss_dssp GGSCCEEEEECTTCC--------------HHHHHHHHCGGGCSCSCEECCGGGSTTEETTEEEEECCCCHHHHHHHHHHH
T ss_pred hcCccceeecccCCc--------------hHhhhhhccCCCcccccccCcccchhhhhccCcccccchhhhHHhhhHHHH
Confidence 367788976541 12333333221 2233444443211000000 0 0000000000000
Q ss_pred CCccccccCcceecccCCCCCCCCCCCCC----ChhhHHHHHHHHhcCCCeeEEecCCcCC
Q 014892 285 PGVMGWWPSRAVTFLDNHDTGSTQAHWPF----PSNHIMEGYAYILMHPGIPSVFYDHFYD 341 (416)
Q Consensus 285 ~~~~~~~p~~~~~fl~nHD~~R~~~~~~~----~~~~~~~a~a~llt~pGiP~Iy~G~E~g 341 (416)
.. ..........|++|||++|..+.+.. ..++.++|++++||+||+||||||||+|
T Consensus 312 ~~-~~~~~~~~~~~~~nhd~~~~~~~~~~~~~~~~~~~~~~~~~l~t~pGiP~IyyGdEiG 371 (479)
T d1uoka2 312 QK-ALEHTGWNSLYWNNHDQPRVVSRFGNDGMYRIESAKMLATVLHMMKGTPYIYQGEEIG 371 (479)
T ss_dssp HH-HTSSSSCCEECSCCTTSCCHHHHTSCSSTTHHHHHHHHHHHHHTSSSEEEEETTGGGT
T ss_pred hh-hcccccccceecccccccccccccCccHHHHHHHHHHHHHHHHhCCCCcccccccccC
Confidence 00 00012245679999999987655432 2356889999999999999999999986
|
| >d1g5aa2 c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysaccharea [TaxId: 489]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Amylosucrase species: Neisseria polysaccharea [TaxId: 489]
Probab=100.00 E-value=1.1e-54 Score=447.21 Aligned_cols=319 Identities=13% Similarity=0.155 Sum_probs=228.7
Q ss_pred ccCceeEEEeeecCCCCCCcHHHHHhhhhhHHHcCCCEEEeCCCCCCC---CCCCcccccCCCCCCCCCCHHHHHHHHHH
Q 014892 25 RNGREILFQGFNWESCKHDWWRNLERKVPDISKSGFTSVWLPPATHSF---APEGYLPQNLYSLNSSYGSEHLLKALLHK 101 (416)
Q Consensus 25 ~~~~~~~~q~f~~~~~~~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~---~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~ 101 (416)
+..+.+.|+++...+ .|||+||++||||||+||||+||||||++++ ++|||+|.||++|||+|||++||++||++
T Consensus 94 ~~~~~~~~~~y~~~f--gGDl~Gi~~kLdYLk~LGVt~I~L~Pi~~~p~~~sd~GY~v~dy~~Vdp~lGt~edl~~Lv~~ 171 (554)
T d1g5aa2 94 LSNKQVGGVCYVDLF--AGDLKGLKDKIPYFQELGLTYLHLMPLFKCPEGKSDGGYAVSSYRDVNPALGTIGDLREVIAA 171 (554)
T ss_dssp GCTTCCEEEECHHHH--HSSHHHHHTTHHHHHHHTCSEEEECCCBCCCSSCSTTTTSCSCSSSBCTTTCCHHHHHHHHHH
T ss_pred cCcCceeEEEecccc--CcCHHHHHHhhHHHHHcCCCEEEECCCCCCCCCCCCCCcCcccCCCCCcccCCHHHHHHHHHH
Confidence 345567788876432 3799999999999999999999999999985 57999999999999999999999999999
Q ss_pred HHHCCCEEEEEEccccCcCCCCCCC------Ccc----cccCCC------CCCC-------CCCceecCCCCCCCCCCCC
Q 014892 102 MKQHKVRAMADIVINHRVGTTQGHG------GKY----NRYDGI------PLSW-------DEHAVTSCTGGLGNGSTGD 158 (416)
Q Consensus 102 aH~~Gi~VilD~V~NH~~~~~~~~~------~~~----~~f~~~------~~~~-------~~~~~~~~~~~~~~~~~~~ 158 (416)
||++||+||||+|+||+|..|+|+. +.| ..+.+. ...+ .+..+....++ ......
T Consensus 172 aH~rGI~VilD~V~NHts~~h~w~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 249 (554)
T d1g5aa2 172 LHEAGISAVVDFIFNHTSNEHEWAQRCAAGDPLFDNFYYIFPDRRMPDQYDRTLREIFPDQHPGGFSQLEDG--RWVWTT 249 (554)
T ss_dssp HHHTTCEEEEEECCSEEETTSHHHHHHHTTCGGGTTSBCEESSSHHHHHHTTTCCCSSTTTCSTTEEECTTS--CEEECS
T ss_pred HHHCCCEEEEEECcCCCCCCccchhhhhccCCccccceEEcCCCCCCccccCCCcccCCCCCCcceeecCCC--ceeecc
Confidence 9999999999999999999998642 111 111110 0000 00001111110 001122
Q ss_pred CCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCc-------------HHHHHHHHHhc---CC-ceEEEc
Q 014892 159 NFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYS-------------AKYVKEYIEGA---RP-IFSVGE 221 (416)
Q Consensus 159 ~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~-------------~~~~~~~~~~~---~~-~~~vgE 221 (416)
+...+||||++||+|+++|++++++|+ ++||||||+|+++++. ..+|+++...+ .| .+++||
T Consensus 250 f~~~~~dln~~np~V~~~~~~~~~~w~-~~gvDGfRlDa~~~~~~~~~~~~~n~p~~~~~~~~~~~~~~~~~p~~~l~aE 328 (554)
T d1g5aa2 250 FNSFQWDLNYSNPWVFRAMAGEMLFLA-NLGVDILRMDAVAFIWKQMGTSCENLPQAHALIRAFNAVMRIAAPAVFFKSE 328 (554)
T ss_dssp SSTTEEEBCTTSHHHHHHHHHHHHHHH-TTTCSEEEETTGGGSCCCTTSCSSSCHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred cCCcccccccCCHHHHHHHHhhhhhhh-hccccccccccchhhccccccccccCchhhHHHHHHHHHHhhhCCCceeecc
Confidence 346789999999999999999999999 8999999999998884 45777776554 35 788999
Q ss_pred ccCCCCCCCCCCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHh-cCchhhhhhhcCCCCCccccccCcceeccc
Q 014892 222 YWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAV-KGQFWRLRDAQGKPPGVMGWWPSRAVTFLD 300 (416)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~fl~ 300 (416)
.|.. .+++..|+.. +.....+++.+...+..+. .++...+.+........ ..+...++|++
T Consensus 329 ~~~~---------------~~~~~~y~g~-~~~~~~~~~~~~~~~~~a~~~~~~~~l~~~l~~~~~~--~~~~~~~nfl~ 390 (554)
T d1g5aa2 329 AIVH---------------PDQVVQYIGQ-DECQIGYNPLQMALLWNTLATREVNLLHQALTYRHNL--PEHTAWVNYVR 390 (554)
T ss_dssp CCSC---------------HHHHGGGBST-TSBSEEECHHHHHHHHHHHHHCCCHHHHHHHHHSCCC--CTTCEEEEESC
T ss_pred ccCC---------------HHHHHHHhCC-CccccccccccchhhhhhcccccHHHHHHHHHhCccc--CCCCeEEeehh
Confidence 8865 3666777654 3467788888777666665 23332232222111111 11235689999
Q ss_pred CCCCCCCC-----------------------------CCC-------------------------------CCChhhHHH
Q 014892 301 NHDTGSTQ-----------------------------AHW-------------------------------PFPSNHIME 320 (416)
Q Consensus 301 nHD~~R~~-----------------------------~~~-------------------------------~~~~~~~~~ 320 (416)
|||..... ... ....+++++
T Consensus 391 ~HD~ig~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~n~~~~d~~~~~~~~~~~~~~~~~~~~~~r~~l 470 (554)
T d1g5aa2 391 SHDDIGWTFADEDAAYLGISGYDHRQFLNRFFVNRFDGSFARGVPFQYNPSTGDCRVSGTAAALVGLAQDDPHAVDRIKL 470 (554)
T ss_dssp CSSCBCCCCCHHHHHHTTCCHHHHHHHHHHHHTTCSTTCCCCCEEECCCTTTCCCEEECCHHHHHTGGGTCTTHHHHHHH
T ss_pred cccccccccchhhhhhhcccchHHHHHHhhhcccccccccccCcchhccccccccccccchhhccccccchHHHHHHHHH
Confidence 99952110 000 001236789
Q ss_pred HHHHHhcCCCeeEEecCCcCCCc--------------------------------------hhHHHHHHHHHHHHHhCcc
Q 014892 321 GYAYILMHPGIPSVFYDHFYDWG--------------------------------------DSIHNQIVKLMDVRRQQDI 362 (416)
Q Consensus 321 a~a~llt~pGiP~Iy~G~E~gw~--------------------------------------~~l~~~~~~Li~lR~~~~~ 362 (416)
|++++||+||||+||||||+|.. .++++++|+||+|||++|+
T Consensus 471 a~alllt~pGiP~IYyGdEiG~~nd~~~~~d~~~~~~~rw~~r~~~~~~~~~~~~d~~s~~~~v~~~~r~Li~lRk~~pA 550 (554)
T d1g5aa2 471 LYSIALSTGGLPLIYLGDEVGTLNDDDWSQDSNKSDDSRWAHRPRYNEALYAQRNDPSTAAGQIYQDLRHMIAVRQSNPR 550 (554)
T ss_dssp HHHHHHHSSSEEEEETTGGGTCCCCSSGGGCTTTTTCGGGGGCCCCCHHHHTTTTCTTSHHHHHHHHHHHHHHHHHHCGG
T ss_pred HHHHHHHcCChhhheechhhCCCCChhhccCCCCCCCchhhccccCCHHHHHhhhCcccHHHHHHHHHHHHHHHHhhCHh
Confidence 99999999999999999998620 1489999999999999999
Q ss_pred cCCC
Q 014892 363 HSRS 366 (416)
Q Consensus 363 l~~G 366 (416)
|+.|
T Consensus 551 f~~G 554 (554)
T d1g5aa2 551 FDGG 554 (554)
T ss_dssp GCSS
T ss_pred hcCC
Confidence 9887
|
| >d1bf2a3 c.1.8.1 (A:163-637) Isoamylase, central domain {Pseudomonas amyloderamosa [TaxId: 32043]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Isoamylase, central domain species: Pseudomonas amyloderamosa [TaxId: 32043]
Probab=100.00 E-value=1e-55 Score=447.25 Aligned_cols=179 Identities=19% Similarity=0.253 Sum_probs=142.7
Q ss_pred eeeeccCceeEEEeeecCCCCC---------CcHHHHHhhhhhHHHcCCCEEEeCCCCCCC--------------CCCCc
Q 014892 21 RAVIRNGREILFQGFNWESCKH---------DWWRNLERKVPDISKSGFTSVWLPPATHSF--------------APEGY 77 (416)
Q Consensus 21 ~~~~~~~~~~~~q~f~~~~~~~---------G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~--------------~~~GY 77 (416)
.|+.+..|.||||++.++++.. |||+||++||||||+||||+||||||++++ +||||
T Consensus 9 ~~~~~~~d~viYei~v~~f~~~~~~~~~~~~Gd~~Gi~~kLdyl~~LGvnaiwl~Pi~~~~~~~~~~~~~~~~~~~y~GY 88 (475)
T d1bf2a3 9 KPTRAQKDDVIYEVHVRGFTEQDTSIPAQYRGTYYGAGLKASYLASLGVTAVEFLPVQETQNDANDVVPNSDANQNYWGY 88 (475)
T ss_dssp CCCCCGGGCCEEEECHHHHHTTCTTSCGGGTTSHHHHHHTHHHHHHHTCCEEEESCCBCBSCTTTTSSTTCCTTCCCSCC
T ss_pred CCCCCCcceEEEEEEhhHhccCCCCCCccccCCHHHHHhhhHHHHHcCCCEEEeCCCCcCCCcccccccccccCcCCCCC
Confidence 5777788899999999866332 899999999999999999999999999875 36899
Q ss_pred ccccCCCCCCCC-------CCHHHHHHHHHHHHHCCCEEEEEEccccCcCCCCCCCCcc--cccCCCCCCCCCCc-eecC
Q 014892 78 LPQNLYSLNSSY-------GSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKY--NRYDGIPLSWDEHA-VTSC 147 (416)
Q Consensus 78 ~~~d~~~id~~~-------Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~--~~f~~~~~~~~~~~-~~~~ 147 (416)
+|.||++|||+| ||.+|||+||++||++||+||+|+|+||++..|+|+.... ..+. .|.... ...+
T Consensus 89 ~~~d~~~vdp~y~~~~~~~Gt~~d~~~LV~~aH~~GIrVilD~V~NH~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 164 (475)
T d1bf2a3 89 MTENYFSPDRRYAYNKAAGGPTAEFQAMVQAFHNAGIKVYMDVVYNHTAEGGTWTSSDPTTATIY----SWRGLDNATYY 164 (475)
T ss_dssp CBSCSSCBCGGGCSCCSTTHHHHHHHHHHHHHHHTTCEEEEEECCSSCTTCSBSSSSCSSCBBCS----SHHHHHHHHHB
T ss_pred CcccCCCcCcccccCCCCCCCHHHHHHHHHHHHhcCcEEEEEeccccccCCCcccccCCCcCccc----cccCccccccc
Confidence 999999999999 9999999999999999999999999999999998765321 1110 010000 0001
Q ss_pred CCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcH
Q 014892 148 TGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSA 203 (416)
Q Consensus 148 ~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~ 203 (416)
...............+||||+.||+|++++++++++|++++||||||+|++++++.
T Consensus 165 ~~~~~~~~~~~~~~~~~dln~~np~V~~~~~~~~~~w~~~~gvDGfR~D~~~~~~~ 220 (475)
T d1bf2a3 165 ELTSGNQYFYDNTGIGANFNTYNTVAQNLIVDSLAYWANTMGVDGFRFDLASVLGN 220 (475)
T ss_dssp CBCTTSSSBCCSSSSSCCBCTTSHHHHHHHHHHHHHHHHTSCCCEEEETTGGGGGB
T ss_pred ccCCCccccccCCCccCccchhhhHHHHHHHHHHHhhhhhcCCceEEEehHhhhch
Confidence 11111112233457789999999999999999999999899999999999988864
|
| >d1ud2a2 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillus sp., ksm-k38 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus sp., ksm-k38 [TaxId: 1409]
Probab=100.00 E-value=3.8e-54 Score=421.24 Aligned_cols=316 Identities=21% Similarity=0.445 Sum_probs=227.1
Q ss_pred ceeEEEeeecCCCCC-CcHHHHHhhhhhHHHcCCCEEEeCCCCCCCC--CCCcccccCC---------CCCCCCCCHHHH
Q 014892 28 REILFQGFNWESCKH-DWWRNLERKVPDISKSGFTSVWLPPATHSFA--PEGYLPQNLY---------SLNSSYGSEHLL 95 (416)
Q Consensus 28 ~~~~~q~f~~~~~~~-G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~--~~GY~~~d~~---------~id~~~Gt~~d~ 95 (416)
++||+|.|+|..+++ |++++|++||||||+||||+||||||+++++ ++||++.||| +|+|+||+.+||
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~i~~kLdyLk~LGvt~I~l~Pi~~~~~~~~~gY~~~d~~~~~~~~~~~~vd~~~Gt~~ef 83 (390)
T d1ud2a2 4 NGTMMQYYEWHLENDGQHWNRLHDDAAALSDAGITAIWIPPAYKGNSQADVGYGAYDLYDLGEFNQKGTVRTKYGTKAQL 83 (390)
T ss_dssp CCCEEECCCTTCCCSSCHHHHHHHHHHHHHHHTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCHHHH
T ss_pred CCeEEEeeccCCCCCCCCHHHHHHHHHHHHHcCCCEEEeCCCccCCCCCCCCCCccCCcccccccccCCcCCCCCCHHHH
Confidence 589999999988775 6999999999999999999999999998754 8999999996 799999999999
Q ss_pred HHHHHHHHHCCCEEEEEEccccCcCCCCCCC---------CcccccCC--------------CCCCCCCC-----c----
Q 014892 96 KALLHKMKQHKVRAMADIVINHRVGTTQGHG---------GKYNRYDG--------------IPLSWDEH-----A---- 143 (416)
Q Consensus 96 ~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~---------~~~~~f~~--------------~~~~~~~~-----~---- 143 (416)
|+||++||++||+||||+|+||++..+++.. ..|..+.. ....+.+. .
T Consensus 84 k~lV~~~H~~GI~VilDvV~NHt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (390)
T d1ud2a2 84 ERAIGSLKSNDINVYGDVVMNHKMGADFTEAVQAVQVNPTNRWQDISGAYTIDAWTGFDFSGRNNAYSDFKWRWFHFNGV 163 (390)
T ss_dssp HHHHHHHHHTTCEEEEEECCSEECCCSEEEEEEEEEEETTEEEEECSCCEEEEEEEEBCCGGGTTSSCCCCBCGGGEEEE
T ss_pred HHHHHHHHhcCCceEEEEccccccCcccchhhhhcccCcccccccccccccccccccccCCccCCcCCCCcccccccCCC
Confidence 9999999999999999999999999886421 01110000 00000000 0
Q ss_pred ----------eecCCC-CCC----CCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcHHHHHH
Q 014892 144 ----------VTSCTG-GLG----NGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKE 208 (416)
Q Consensus 144 ----------~~~~~~-~~~----~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~~~~~~ 208 (416)
...... ... ..........+++++..+|.+++++.+++.+|+..+|+||||+|+++++..+++.+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~dg~r~D~~~~~~~~~~~~ 243 (390)
T d1ud2a2 164 DWDQRYQENHIFRFANTNWNWRVDEENGNYDYLLGSNIDFSHPEVQDELKDWGSWFTDELDLDGYRLDAIKHIPFWYTSD 243 (390)
T ss_dssp EEETTTTEEEEEEETTCCCCSSCCCTTSCCCCCSSEEECTTSHHHHHHHHHHHHHHHHHHTCSEEEETTGGGSCHHHHHH
T ss_pred CccccCCCCceeeccCCccccccccccccccccccccccccCHHHHHHHHHhhhhccceeccccccccchhhcChHHHHH
Confidence 000000 000 00112224567899999999999999999999999999999999999999999988
Q ss_pred HHHhc----CC-ceEEEcccCCCCCCCCCCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHh-cCchhhhhhhcC
Q 014892 209 YIEGA----RP-IFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAV-KGQFWRLRDAQG 282 (416)
Q Consensus 209 ~~~~~----~~-~~~vgE~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~-~~~~~~~~~~~~ 282 (416)
+.... .+ .+.++|.|... ......+..........+++.+...+..+. ......+...+.
T Consensus 244 ~~~~~~~~~~~~~~~~~e~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (390)
T d1ud2a2 244 WVRHQRNEADQDLFVVGEYWKDD--------------VGALEFYLDEMNWEMSLFDVPLNYNFYRASQQGGSYDMRNILR 309 (390)
T ss_dssp HHHHHHHHCSSCCEEEECCCCSC--------------HHHHHHHHHHTTTCSEEECHHHHHHHHHHHHHCTTSCGGGTTT
T ss_pred HHHHHhhhhhhheeeeccccCCc--------------cccccccccccccccchhhHHHHHHHHHHhcccchHHHHHHHh
Confidence 87653 23 56799988652 122222222223345667777777777665 223333333332
Q ss_pred CCCCccccccCcceecccCCCCCCCCCCCCC--ChhhHHHHHHHHhcCCCeeEEecCCcCCCc----hhHHHHHHHHHHH
Q 014892 283 KPPGVMGWWPSRAVTFLDNHDTGSTQAHWPF--PSNHIMEGYAYILMHPGIPSVFYDHFYDWG----DSIHNQIVKLMDV 356 (416)
Q Consensus 283 ~~~~~~~~~p~~~~~fl~nHD~~R~~~~~~~--~~~~~~~a~a~llt~pGiP~Iy~G~E~gw~----~~l~~~~~~Li~l 356 (416)
.. .....|.++++|++|||++|+.+.... +..+.++++++++|+||+|+||||||+|.. ..-.+.|++||++
T Consensus 310 ~~--~~~~~~~~~v~fl~nHD~~r~~~~~~~~~~~~~~~~~~~il~~~pG~P~iy~GdE~G~~~~~~~~~~d~i~~l~~~ 387 (390)
T d1ud2a2 310 GS--LVEAHPMHAVTFVDNHDTQPGESLESWVADWFKPLAYATILTREGGYPNVFYGDYYGIPNDNISAKKDMIDELLDA 387 (390)
T ss_dssp TC--HHHHCGGGEEECSCCTTTSTTSTTCCCCCTTTHHHHHHHHHSSSSSEEEEEHHHHHCBGGGTBCCCHHHHHHHHHH
T ss_pred hc--cccCCccceEEEccCCccccccccccCcCHHHHHHHHHHHHHhCCCCeEEEchhhcCCCCCCCccchHHHHHHHHH
Confidence 21 122346688999999999999876543 233445566677789999999999999854 3567889999999
Q ss_pred HHh
Q 014892 357 RRQ 359 (416)
Q Consensus 357 R~~ 359 (416)
||.
T Consensus 388 R~~ 390 (390)
T d1ud2a2 388 RQN 390 (390)
T ss_dssp HHH
T ss_pred cCC
Confidence 984
|
| >d1m7xa3 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enzyme, central domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: 1,4-alpha-glucan branching enzyme, central domain species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=2e-53 Score=417.31 Aligned_cols=310 Identities=12% Similarity=0.070 Sum_probs=214.2
Q ss_pred eEEEeeecCCCCC------CcHHHHHhhh-hhHHHcCCCEEEeCCCCCCC--CCCCcccccCCCCCCCCCCHHHHHHHHH
Q 014892 30 ILFQGFNWESCKH------DWWRNLERKV-PDISKSGFTSVWLPPATHSF--APEGYLPQNLYSLNSSYGSEHLLKALLH 100 (416)
Q Consensus 30 ~~~q~f~~~~~~~------G~~~gi~~~L-dyLk~LGv~~I~L~Pi~~~~--~~~GY~~~d~~~id~~~Gt~~d~~~Lv~ 100 (416)
+|||++.++++.+ |||+||++|| ||||+||||+||||||++++ ++|||+|.||++|||+|||++||++||+
T Consensus 18 ~iYe~~~~~f~~~~~~~~~g~~~gi~~klidyl~~LGv~~iwl~Pi~~~~~~~~hGY~~~d~~~vdp~~Gt~~d~~~LV~ 97 (396)
T d1m7xa3 18 SIYEVHLGSWRRHTDNNFWLSYRELADQLVPYAKWMGFTHLELLPINEHPFDGSWGYQPTGLYAPTRRFGTRDDFRYFID 97 (396)
T ss_dssp EEEEECTTSSCBCTTTCCBCCHHHHHHHHHHHHHHTTCSEEEESCCEECSCGGGTTSSCSEEEEECGGGSCHHHHHHHHH
T ss_pred EEEEEccCccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCcCcCcCCCcCcccCCHHHHHHHHH
Confidence 7999999987543 8999999997 99999999999999999887 5899999999999999999999999999
Q ss_pred HHHHCCCEEEEEEccccCcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHH
Q 014892 101 KMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAW 180 (416)
Q Consensus 101 ~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~ 180 (416)
+||++||+||+|+|+||++..+++....-..+. .+.. +... ......+.+++|+.+|+++.++.++
T Consensus 98 ~aH~~gi~VilD~V~NH~~~~~~~~~~~~~~~~----~~~~-------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (396)
T d1m7xa3 98 AAHAAGLNVILDWVPGHFPTDDFALAEFDGTNL----YEHS-------DPRE---GYHQDWNTLIYNYGRREVSNFLVGN 163 (396)
T ss_dssp HHHHTTCEEEEEECTTSCCCSTTSSTTGGGSCS----SBCC---------------------CCCBCTTSHHHHHHHHHH
T ss_pred HHhhhhhhhhhcccccccCCcccccccccCCcc----cccc-------CCCC---CCCCCCCCccccCCCchhHHHHHHH
Confidence 999999999999999999999886543211100 0000 0000 0111235678999999999999999
Q ss_pred HHHHHHhcCCCeEEecccCCC------------------------cHHHHHHHHHhc---CC-ceEEEcccCCCCCCCCC
Q 014892 181 LRWLRNTVGFQDFRFDFARGY------------------------SAKYVKEYIEGA---RP-IFSVGEYWDSCNYNSHG 232 (416)
Q Consensus 181 ~~~w~~~~gvDGfRlD~a~~~------------------------~~~~~~~~~~~~---~~-~~~vgE~~~~~~~~~~~ 232 (416)
+++|+.++||||||+|++.+. ..++|+++...+ +| .++++|.+.....
T Consensus 164 ~~~~~~~~gvDG~R~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~---- 239 (396)
T d1m7xa3 164 ALYWIERFGIDALRVDAVASMIYRDYSRKEGEWIPNEFGGRENLEAIEFLRNTNRILGEQVSGAVTMAEESTDFPG---- 239 (396)
T ss_dssp HHHHHHHSCCCEEEECCSHHHHCC--------------CTTCCHHHHHHHHHHHHHHHHSSTTCEEEECCSSCCTT----
T ss_pred HHHHHHHhCCcceeeechhhhccchhcccccccccccccccccchHHHHHHHHHHHHhhhCCCceEEEeecCCCcc----
Confidence 999999999999999987542 133555554443 34 6788997764211
Q ss_pred CCCccchhhHhHhhhhc-cCCCcccccCchhhHHHHHHhcCc-hhhhh--hhc--CCCCCccccccCcceecccCCCCCC
Q 014892 233 LDYNQDSHRQRIINWID-GTGQLSAAFDFTTKGILQEAVKGQ-FWRLR--DAQ--GKPPGVMGWWPSRAVTFLDNHDTGS 306 (416)
Q Consensus 233 ~~~~~~~~~~~l~~~~~-~~~~~~~~fdf~~~~~l~~~~~~~-~~~~~--~~~--~~~~~~~~~~p~~~~~fl~nHD~~R 306 (416)
+..... ........+++.+...+....... ..... ..+ ................+..+||..|
T Consensus 240 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (396)
T d1m7xa3 240 -----------VSRPQDMGGLGFWYKWNLGWMHDTLDYMKLDPVYRQYHHDKLTFGILYNYTENFVLPLSHDEVVHGKKS 308 (396)
T ss_dssp -----------TTBCTTTTBSCCSEEECHHHHHHHHHHHHSCGGGGGGCTHHHHGGGTTTTTSCEEEEECGGGSSTTSCC
T ss_pred -----------ccccccccccchhhhhccchhhhhhhhccchhhhhhhhccccchhhhhhhhhhccccccccccccCCCc
Confidence 000000 011234455555555555544221 11000 000 0000000001112356778898887
Q ss_pred CCCCCCCC----hhhHHHHHHHHhcCCCeeEEecCCcCCC------------c---------hhHHHHHHHHHHHHHhCc
Q 014892 307 TQAHWPFP----SNHIMEGYAYILMHPGIPSVFYDHFYDW------------G---------DSIHNQIVKLMDVRRQQD 361 (416)
Q Consensus 307 ~~~~~~~~----~~~~~~a~a~llt~pGiP~Iy~G~E~gw------------~---------~~l~~~~~~Li~lR~~~~ 361 (416)
........ ..++++|++++||+||+||||||||+|- . +.+++++|+|++|||++|
T Consensus 309 ~~~~~~~~~~~~~~~~~la~a~llt~pG~P~IYyGdEiG~~~~~~~~~~~~w~~~~~~~~~~~~l~~~~~~L~~lR~~~p 388 (396)
T d1m7xa3 309 ILDRMPGDAWQKFANLRAYYGWMWAFPGKKLLFMGNEFAQGREWNHDASLDWHLLEGGDNWHHGVQRLVRDLNLTYRHHK 388 (396)
T ss_dssp HHHHSCSSHHHHHHHHHHHHHHHHHSSSEEEEETTTTTTCSSCCCTTSCCCGGGGCSSCCHHHHHHHHHHHHHHHHTTCG
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHhCCccEeecccccCCCCCCCCCCCCChhhccCcchhhHHHHHHHHHHHHHHHcCH
Confidence 65443322 2357899999999999999999999962 1 258999999999999999
Q ss_pred ccCCCCe
Q 014892 362 IHSRSSI 368 (416)
Q Consensus 362 ~l~~G~~ 368 (416)
+|.+|++
T Consensus 389 aL~~~~~ 395 (396)
T d1m7xa3 389 AMHELDF 395 (396)
T ss_dssp GGTSCTT
T ss_pred HhhccCC
Confidence 9999876
|
| >d2fhfa5 c.1.8.1 (A:403-965) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Pullulanase PulA species: Klebsiella pneumoniae [TaxId: 573]
Probab=100.00 E-value=1.8e-50 Score=415.82 Aligned_cols=195 Identities=17% Similarity=0.206 Sum_probs=149.4
Q ss_pred eeeccCceeEEEeeecCCCC-----CCcHHH-----------HHhhhhhHHHcCCCEEEeCCCCCCCC------------
Q 014892 22 AVIRNGREILFQGFNWESCK-----HDWWRN-----------LERKVPDISKSGFTSVWLPPATHSFA------------ 73 (416)
Q Consensus 22 ~~~~~~~~~~~q~f~~~~~~-----~G~~~g-----------i~~~LdyLk~LGv~~I~L~Pi~~~~~------------ 73 (416)
++.+-.+.||||++.++++. .|+++| ||+||||||+||||+||||||+++++
T Consensus 15 ~~~~~~~~viYei~vr~F~d~~~d~~~~~~G~f~~~~~~~~~~i~~LdyL~~LGVtaiwL~Pi~~~~~~d~~~~~~~~~~ 94 (563)
T d2fhfa5 15 TKADLAKMTIHESHIRDLSAWDQTVPAELRGKYLALTAQESNMVQHLKQLSASGVTHIELLPVFDLATVNEFSDKVADIQ 94 (563)
T ss_dssp SHHHHHTCEEEEECHHHHHTTCTTSCGGGTTSGGGGGCTTSHHHHHHHHHHHHTCCEEEESCCEEESSSCCCGGGCCCTT
T ss_pred CCCCHHHcEEEEecchhhhccCCCCccccCcChhhccccCcchhhhHHHHHHcCCCEEEeCCcccCCccccccccccccc
Confidence 34455679999999987642 246666 99999999999999999999987542
Q ss_pred -----------------------------------------------------------CCCcccccCCCCCCCCCC---
Q 014892 74 -----------------------------------------------------------PEGYLPQNLYSLNSSYGS--- 91 (416)
Q Consensus 74 -----------------------------------------------------------~~GY~~~d~~~id~~~Gt--- 91 (416)
+|||+|.|||+|+|+|||
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~wGYdv~dy~~i~p~~Gt~~d 174 (563)
T d2fhfa5 95 QPFSRLCEVNSAVKSSEFAGYCDSGSTVEEVLTQLKQNDSKDNPQVQALNTLVAQTDSYNWGYDPFHYTVPEGSYATDPE 174 (563)
T ss_dssp SBHHHHHHHCHHHHTSTTGGGTTSSCBHHHHHHHHSTTCBTTBCHHHHHHHHHTTSSSCCCCCCEEEEEEECSTTSSCCS
T ss_pred cccccccccccccchhhhhhhccccchhhhhhhcccccccchhhhhhcccccccccCcCCCCCChhhcccccCccCcCcc
Confidence 469999999999999999
Q ss_pred ----HHHHHHHHHHH-HHCCCEEEEEEccccCcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcC
Q 014892 92 ----EHLLKALLHKM-KQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNI 166 (416)
Q Consensus 92 ----~~d~~~Lv~~a-H~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl 166 (416)
.+|||+||++| |++|||||||+|+||+|..|+|+......... +..|... ..... ....+.+.+++
T Consensus 175 ~~~~l~Efk~lV~a~~H~rGIkVIlD~V~NHts~~h~wf~~~~~~~~~-~~~y~~~---~~~~~-----~~~~~~~~~~~ 245 (563)
T d2fhfa5 175 GTARIKEFRTMIQAIKQDLGMNVIMDVVYNHTNAAGPTDRTSVLDKIV-PWYYQRL---NETTG-----SVESATCCSDS 245 (563)
T ss_dssp TTHHHHHHHHHHHHHHHTSCCEEEEEECTTEESCCSSSCTTCCHHHHS-TTTSBCB---CTTTC-----CBCCTTSSEEB
T ss_pred hhhHHHHHHHHHHHHhhccCceeeecCcccccCCCCCchhhcccCCCC-Ccceecc---CCCCC-----cccCCCCCccc
Confidence 68899999987 89999999999999999999987532111000 0000000 00000 01123456889
Q ss_pred CCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcHHHHHHHHHhc---CC-ceEEEcccCC
Q 014892 167 DHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKEYIEGA---RP-IFSVGEYWDS 225 (416)
Q Consensus 167 n~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~~~~~~~~~~~---~~-~~~vgE~~~~ 225 (416)
++.+|.++.++.++..+|+.++++||||+|++..++..++..+...+ .+ ...++|.|+.
T Consensus 246 ~~~~~~~~~~~~d~~~~~~~~~~~dg~r~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (563)
T d2fhfa5 246 APEHRMFAKLIADSLAVWTTDYKIDGFRFDLMLYHPKAQILSAWERIKALNPDIYFFGEGWDS 308 (563)
T ss_dssp CTTSHHHHHHHHHHHHHHHHHHCCCEEEETTGGGSBHHHHHHHHHHHHTTCTTCEEEECCCCC
T ss_pred CccchhHHHHHHHhhHHHHhhhcccccchhhhhhcchhhhhhhhHHHhhhCcccccccccccc
Confidence 99999999999999999999999999999999999999887765543 23 5678888865
|
| >d1r7aa2 c.1.8.1 (A:1-434) Sucrose phosphorylase {Bifidobacterium adolescentis [TaxId: 1680]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Sucrose phosphorylase species: Bifidobacterium adolescentis [TaxId: 1680]
Probab=100.00 E-value=2e-47 Score=376.11 Aligned_cols=169 Identities=12% Similarity=0.086 Sum_probs=127.3
Q ss_pred CceeEEEeeecCCCCCCcHHHHHhhhhhHHHcCCCEEEeCCCCCCC--CCCCcccccCCCCCCCCCCHHHHHHHHHHHHH
Q 014892 27 GREILFQGFNWESCKHDWWRNLERKVPDISKSGFTSVWLPPATHSF--APEGYLPQNLYSLNSSYGSEHLLKALLHKMKQ 104 (416)
Q Consensus 27 ~~~~~~q~f~~~~~~~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~--~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~ 104 (416)
..+|+|++|. ++..+|||+||++||||||+||||+||||||+++. ++|||+|.||++|||+|||++|||+| +
T Consensus 2 ~~~~~~~~y~-d~~~~Gdl~g~~~~Ldyl~~LGv~~I~L~Pi~~~~~~~d~GY~~~Dy~~vdp~~Gt~~d~k~L-----~ 75 (434)
T d1r7aa2 2 KNKVQLITYA-DRLGDGTIKSMTDILRTRFDGVYDGVHILPFFTPFDGADAGFDPIDHTKVDERLGSWDDVAEL-----S 75 (434)
T ss_dssp CSSCEEEECS-SSBSSSSHHHHHHHHHHHSTTTCCEEEECCCEECSSSSSTTSSCSEEEEECTTTCCHHHHHHH-----H
T ss_pred CCceEEEEec-CCCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCCCcCcccccccCcccCCHHHHHHH-----H
Confidence 3579999998 55677999999999999999999999999999744 68999999999999999999999999 4
Q ss_pred CCCEEEEEEccccCcCCCCCCCC--------ccc-ccCC---CCCCC----------CC--C-ceecC-CCCCCCCCCCC
Q 014892 105 HKVRAMADIVINHRVGTTQGHGG--------KYN-RYDG---IPLSW----------DE--H-AVTSC-TGGLGNGSTGD 158 (416)
Q Consensus 105 ~Gi~VilD~V~NH~~~~~~~~~~--------~~~-~f~~---~~~~~----------~~--~-~~~~~-~~~~~~~~~~~ 158 (416)
+||+||||+|+||+|..++++.. .|. ++.. ...+. .. . ..... ...........
T Consensus 76 rGi~VIlDvV~NHt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (434)
T d1r7aa2 76 KTHNIMVDAIVNHMSWESKQFQDVLAKGEESEYYPMFLTMSSVFPNGATEEDLAGIYRPRPGLPFTHYKFAGKTRLVWVS 155 (434)
T ss_dssp TTSEEEEEEECSEEETTSHHHHHHHHHGGGSTTGGGBCBHHHHCTTCBCHHHHHTSCCSSSSCSEEEEEETTEEEEEECS
T ss_pred hCCeeeEEecccccccccchhhhhhhccCCCcccccccccCCCCCCccccCCCCcccccCCcccccccccccccceeeec
Confidence 79999999999999999975431 111 1110 00000 00 0 00000 00000011122
Q ss_pred CCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCc
Q 014892 159 NFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYS 202 (416)
Q Consensus 159 ~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~ 202 (416)
....+|++|+.+|+|++++.+++++|+ ++|+||||+|+++++.
T Consensus 156 ~~~~~~~ln~~~p~v~~~~~~~~~~w~-~~g~dg~r~d~~~~~~ 198 (434)
T d1r7aa2 156 FTPQQVDIDTDSDKGWEYLMSIFDQMA-ASHVSYIRLDAVGYGA 198 (434)
T ss_dssp SSTTEEEBCTTSHHHHHHHHHHHHHHH-HTTCCEEEEETGGGSC
T ss_pred cccccchhcccchhhhhhhhhHhhhhh-ccCCcccccccccccc
Confidence 346789999999999999999999999 8899999999998764
|
| >d1gjwa2 c.1.8.1 (A:1-572) Maltosyltransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltosyltransferase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=5.2e-48 Score=399.21 Aligned_cols=313 Identities=12% Similarity=0.094 Sum_probs=215.4
Q ss_pred eeccCceeEEEeeecCCCC-------------------CCcHHHHHhhhhhHHHcCCCEEEeCCCCCCC-------CCCC
Q 014892 23 VIRNGREILFQGFNWESCK-------------------HDWWRNLERKVPDISKSGFTSVWLPPATHSF-------APEG 76 (416)
Q Consensus 23 ~~~~~~~~~~q~f~~~~~~-------------------~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~-------~~~G 76 (416)
+-|-.++||||+|.+.++. .|||+||++||||||+||||+||||||+++. .+||
T Consensus 78 p~w~~~~viYei~v~~F~~~~~~g~~~~~~~~~~g~~~~Gd~~Gi~~kLdYLk~LGvtaI~L~Pi~~~~~~~~~~~~~~G 157 (572)
T d1gjwa2 78 PDWIKRSVVYGSLPRTTAAYNHKGSGYYEENDVLGFREAGTFFKMMLLLPFVKSLGADAIYLLPVSRMSDLFKKGDAPSP 157 (572)
T ss_dssp GGGGGGCCEEEECHHHHTCCCTTSSSCCCSBCTTSCBCSCCHHHHHHTHHHHHHHTCCEEEECCCEEECCSSCSSSSCCT
T ss_pred CccccCcEEEEEechhhcCCCCCCCcccccCcccCccCCCCHHHHHHhhHHHHHcCCCEEEeCCcccCccccCCCCCCCC
Confidence 3344569999999986542 3899999999999999999999999999754 3789
Q ss_pred cccccCCCCCCC--------CCCHHHHHHHHHHHHHCCCEEEEEEccccCcCCCCCCCCcccccCC---------CCC--
Q 014892 77 YLPQNLYSLNSS--------YGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDG---------IPL-- 137 (416)
Q Consensus 77 Y~~~d~~~id~~--------~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~---------~~~-- 137 (416)
|+|.||++|+|+ |||.+|||+||++||++||+||||+|+||++.+|+|+.....+|.. .+.
T Consensus 158 Y~~~dy~~~dp~~~~~~~~~~Gt~~dfk~lV~~~H~~GI~VIlDvV~NHts~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 237 (572)
T d1gjwa2 158 YSVKNPMELDERYHDPLLEPFKVDEEFKAFVEACHILGIRVILDFIPRTAARDSDLIREHPDWFYWIKVEELADYTPPRA 237 (572)
T ss_dssp TSEEEEEEECGGGSCGGGTTSCHHHHHHHHHHHHHHTTCEEEEEECTTEEETTCGGGTTCGGGSCCEEGGGSTTCCCCCC
T ss_pred CCccCCCCCCcccccccccCCCCHHHHHHHHHHHHhcCcEEEEEeeecccccCCHHHHhCccccccccccccccCCCCCC
Confidence 999999999975 7999999999999999999999999999999999875432111100 000
Q ss_pred -----CCCCCc-------------------------------------------------------eecCCCC----CCC
Q 014892 138 -----SWDEHA-------------------------------------------------------VTSCTGG----LGN 153 (416)
Q Consensus 138 -----~~~~~~-------------------------------------------------------~~~~~~~----~~~ 153 (416)
.+.... .....+. +..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vdgfr~d~~~~~~~~~~~~~~~~~~ 317 (572)
T d1gjwa2 238 EELPFKVPDEDELEIIYNKENVKRHLKKFTLPPNLIDPQKWEKIKREEGNILELIVKEFGIITPPGFSDLINDPQPTWDD 317 (572)
T ss_dssp TTSCSBCCCHHHHHHHHTSHHHHHHHTTBCCCHHHHCHHHHHHHHTCSSCHHHHHHHHHSEECCCBCCSSBTCCSCCBTT
T ss_pred CCCcccCCCCcccccccCCceeeeeccccCCCccccCHHHHHHHHHHhhhHHhcccceeeccccccccccccCCcccccc
Confidence 000000 0000000 000
Q ss_pred ----------C-----CCCC----------CCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCcHHHHHH
Q 014892 154 ----------G-----STGD----------NFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYSAKYVKE 208 (416)
Q Consensus 154 ----------~-----~~~~----------~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~~~~~~~ 208 (416)
+ .... .......++..++++++.+.+++++|++.+|++|+|++.+.+++..+|..
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (572)
T d1gjwa2 318 VTFLRLYLDHPEASKRFLDPNQPPYVLYDVIKASKFPGKEPNRELWEYLAGVIPHYQKKYGIDGARLDMGHALPKELLDL 397 (572)
T ss_dssp EEECCCBSSCCGGGGGGSCTTCCCCCCHHHHCTTTSCCSSBCHHHHHHHTTHHHHHHHHHCCCEEEESSGGGSCHHHHHH
T ss_pred hhhhhhcccCcchhhhhhcccccchhhccchhhcccccccccHHHHHHHhhhhhHHHhhccccchhhhccccCchhHHHH
Confidence 0 0000 00122345677899999999999999999999999999999999999998
Q ss_pred HHHhcC---C-ceEEEcccCCCCCCCCCCCCccchhhHhHhhhhccCCCcccccCchhhHHHHHHh-cCchhhhhhhcCC
Q 014892 209 YIEGAR---P-IFSVGEYWDSCNYNSHGLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAV-KGQFWRLRDAQGK 283 (416)
Q Consensus 209 ~~~~~~---~-~~~vgE~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~fdf~~~~~l~~~~-~~~~~~~~~~~~~ 283 (416)
+...++ + .+++||.+... ..... ...++..+++... .... ........+..
T Consensus 398 ~~~~~~~~~~~~~~~~e~~~~~--------------~~~~~----~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-- 453 (572)
T d1gjwa2 398 IIKNVKEYDPAFVMIAEELDME--------------KDKAS----KEAGYDVILGSSW----YFAGRVEEIGKLPDIA-- 453 (572)
T ss_dssp HHHHHHHHCTTCEEEECCCCGG--------------GHHHH----HHHTCSEECCCHH----HHHTCTTTGGGHHHHH--
T ss_pred HHHHHhccCCceEEEeeecccc--------------cchhh----hhcchhhHhccch----hhHHHHHHHHHHHhhc--
Confidence 887654 3 56788865431 01110 0011222333221 1111 11111111111
Q ss_pred CCCccccccCcceecccCCCCCCCCCCCCCChhhHHHHHHHHhcCCCeeEEecCCcCCC---------------------
Q 014892 284 PPGVMGWWPSRAVTFLDNHDTGSTQAHWPFPSNHIMEGYAYILMHPGIPSVFYDHFYDW--------------------- 342 (416)
Q Consensus 284 ~~~~~~~~p~~~~~fl~nHD~~R~~~~~~~~~~~~~~a~a~llt~pGiP~Iy~G~E~gw--------------------- 342 (416)
...+...++|++|||++|+.+.......+.++|++++||+||+||||||||+|-
T Consensus 454 -----~~~~~~~~~~~~nHD~~R~~~~~~~~~~~~~~a~~~l~~~~GiP~iy~GdE~G~~~~~n~~~~~~~~~~~~~~~~ 528 (572)
T d1gjwa2 454 -----EELVLPFLASVETPDTPRIATRKYASKMKKLAPFVTYFLPNSIPYVNTGQEIGEKQPMNLGLDTDPNLRKVLSPT 528 (572)
T ss_dssp -----HTCSSCEEECSCCTTSCCGGGSTTHHHHHHHHHHHHHTSTTEEEEEETTGGGTCCSCSCCCSSCCGGGGGCSCTT
T ss_pred -----cccccceeeeccCCCccchhhhcCCHHHHHHHHHHHHHHhcccceeecchhcCCCCCCCCCCCCCcccccCCCcc
Confidence 111234678999999999988776566778899999999999999999999851
Q ss_pred --------------------chhHHHHHHHHHHHHHhCcccC
Q 014892 343 --------------------GDSIHNQIVKLMDVRRQQDIHS 364 (416)
Q Consensus 343 --------------------~~~l~~~~~~Li~lR~~~~~l~ 364 (416)
++++++++|+||+|||+||+|.
T Consensus 529 ~~~~~~~~~~~~~~~d~~~~~~~l~~~~k~Li~lRk~~~~~~ 570 (572)
T d1gjwa2 529 DEFFGKLAFFDHYVLHWDSPDRGVLNFIKKLIKVRHEFLDFV 570 (572)
T ss_dssp STTTTCCTTTSCCCCCTTSCCHHHHHHHHHHHHHHHHTHHHH
T ss_pred cccccccccccccccccccCCHHHHHHHHHHHHHHHhCHHhh
Confidence 1369999999999999999874
|
| >d1iv8a2 c.1.8.1 (A:1-653) Maltooligosyl trehalose synthase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltooligosyl trehalose synthase species: Archaeon Sulfolobus acidocaldarius [TaxId: 2285]
Probab=100.00 E-value=2.9e-34 Score=294.62 Aligned_cols=181 Identities=14% Similarity=0.163 Sum_probs=131.8
Q ss_pred CCCCCcHHHHHhhhhhHHHcCCCEEEeCCCCCCC--CCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccc
Q 014892 39 SCKHDWWRNLERKVPDISKSGFTSVWLPPATHSF--APEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVIN 116 (416)
Q Consensus 39 ~~~~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~--~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~N 116 (416)
+.++|||++|+++|||||+||||+|||+||+++. ++|||+|+||+.|||+|||+++|++||++||++||+||+|+|+|
T Consensus 10 ~~~gftF~~~~~~LpYL~~LGVs~IyLsPi~~a~~gS~HGYDv~D~~~Vdp~lGt~edf~~LV~aaH~~Gm~VIlDiVpN 89 (653)
T d1iv8a2 10 LNKNFNFGDVIDNLWYFKDLGVSHLYLSPVLMASPGSNHGYDVIDHSRINDELGGEKEYRRLIETAHTIGLGIIQDIVPN 89 (653)
T ss_dssp CBTTBCHHHHHHTHHHHHHHTCCEEEECCCEEECTTCSSCCSEEEEEEECTTTTHHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred eCCCCCHHHHHHhhHHHHHCCCCEEEECccCCCCCCCCCCccccCccccchhcCCHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 3456899999999999999999999999999754 68999999999999999999999999999999999999999999
Q ss_pred cCcCCCCCC----------CCcccccCCCCCCCCCCce-----------------------------ecCC------CC-
Q 014892 117 HRVGTTQGH----------GGKYNRYDGIPLSWDEHAV-----------------------------TSCT------GG- 150 (416)
Q Consensus 117 H~~~~~~~~----------~~~~~~f~~~~~~~~~~~~-----------------------------~~~~------~~- 150 (416)
|||.+++++ .+.|..|.. ..|.+... ..+. ..
T Consensus 90 H~g~d~~~~~~~Dvl~~G~~S~y~~~fd--i~~~~~~~~~p~lg~~~~~~l~~g~~~~~~d~~~~~~~~~~~~~P~~~~~ 167 (653)
T d1iv8a2 90 HMAVNSLNWRLMDVLKMGKKSKYYTYFD--FFPEDDKIRLPILGEDLDTVISKGLLKIVKDGDEYFLEYFKWKLPLTEVG 167 (653)
T ss_dssp EEECCTTCHHHHHHHHHGGGSTTGGGBC--BCTTCSSEEEEEESSCHHHHHHTTCEEEEECSSCEEEEETTEEEECSCCC
T ss_pred cccCCcccHHHHHhhhcCCCCCCccccc--ccCCCCCccCCCCCccchhccCCCcceecCCCCceecccccccCCCCCcC
Confidence 999887632 222222111 01110000 0000 00
Q ss_pred ----------------CCCC---CCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCC--cHHHHHHH
Q 014892 151 ----------------LGNG---STGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGY--SAKYVKEY 209 (416)
Q Consensus 151 ----------------~~~~---~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~--~~~~~~~~ 209 (416)
|..+ ....+...++++|.++|+|.+ ++.++|. ++||||||+|+++++ |..||+++
T Consensus 168 ~~~~~~~~~q~y~l~~W~~~~~~~rFfdv~~l~~lr~e~p~Vf~---~v~~~w~-elGVDGfRID~vd~L~dp~~y~~~l 243 (653)
T d1iv8a2 168 NDIYDTLQKQNYTLMSWKNPPSYRRFFDVNTLIGVNVEKDHVFQ---ESHSKIL-DLDVDGYRIDHIDGLYDPEKYINDL 243 (653)
T ss_dssp SSHHHHHTTSSEEEEETTSCCSBCEETTEEEEEEBCTTSHHHHH---HHTTTGG-GSCCSEEEETTGGGCSCHHHHHHHH
T ss_pred ccchhhhhccccCCCCCCCCcccccccccccccccccccHHHHH---HHHHHHH-HcCCcEEEeeCcccccCHHHHHHHH
Confidence 0000 000112345667788877754 4556676 999999999999999 68899999
Q ss_pred HHhcCCceEEEc-ccCC
Q 014892 210 IEGARPIFSVGE-YWDS 225 (416)
Q Consensus 210 ~~~~~~~~~vgE-~~~~ 225 (416)
.+.+++.++++| +|..
T Consensus 244 r~~~~~~~ivvEkil~~ 260 (653)
T d1iv8a2 244 RSIIKNKIIIVEKILGF 260 (653)
T ss_dssp HHHHTTCEEEECCCCCT
T ss_pred HHhcCCCEEEEEeecCC
Confidence 999988776665 5543
|
| >d1tz7a1 c.1.8.1 (A:1-485) Amylomaltase MalQ {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Amylomaltase MalQ species: Aquifex aeolicus [TaxId: 63363]
Probab=98.06 E-value=2.7e-05 Score=75.67 Aligned_cols=62 Identities=15% Similarity=0.119 Sum_probs=47.5
Q ss_pred ceeEEEeeec-CCCCCCcH-HHHHhhhhhHHHcCCCEEEeCCCCCCC---CCCCcccccCCCCCCCC
Q 014892 28 REILFQGFNW-ESCKHDWW-RNLERKVPDISKSGFTSVWLPPATHSF---APEGYLPQNLYSLNSSY 89 (416)
Q Consensus 28 ~~~~~q~f~~-~~~~~G~~-~gi~~~LdyLk~LGv~~I~L~Pi~~~~---~~~GY~~~d~~~id~~~ 89 (416)
.||++|+|-= +...=||| +++..-++.++++|++.|+|+|+.+.. .+..|++.+-++.+|-|
T Consensus 4 ~Gvll~~~SLps~~GIGDfG~~a~~~id~~a~~G~~~~QllPl~~t~~~~~~SPYsp~S~falNPly 70 (485)
T d1tz7a1 4 AGILLHVTSLPSPYGIGDLGKEAYRFLDFLKECGFSLWQVLPLNPTSLEAGNSPYSSNSLFAGNYVL 70 (485)
T ss_dssp EEEECCGGGSCCSSSSCCSSHHHHHHHHHHHHHTCCEEECCCCSCCCGGGTTCTTSCSCSSSCCGGG
T ss_pred eeeeecccccCCCCCCCCHHHHHHHHHHHHHHcCCCEEEecCCCCCCCCCCCCCcCcccchhcCHHH
Confidence 3677777763 22334899 899999999999999999999999853 24678888777766433
|
| >d1x1na1 c.1.8.1 (A:2-524) Amylomaltase MalQ {Potato (Solanum tuberosum) [TaxId: 4113]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Amylomaltase MalQ species: Potato (Solanum tuberosum) [TaxId: 4113]
Probab=98.00 E-value=0.00011 Score=71.91 Aligned_cols=63 Identities=13% Similarity=-0.025 Sum_probs=48.2
Q ss_pred eccCceeEEEeeec-CCCCCCcH-HHHHhhhhhHHHcCCCEEEeCCCCCCC-----CCCCcccccCCCCC
Q 014892 24 IRNGREILFQGFNW-ESCKHDWW-RNLERKVPDISKSGFTSVWLPPATHSF-----APEGYLPQNLYSLN 86 (416)
Q Consensus 24 ~~~~~~~~~q~f~~-~~~~~G~~-~gi~~~LdyLk~LGv~~I~L~Pi~~~~-----~~~GY~~~d~~~id 86 (416)
-+-..||++|+|=- ....=||| +++.+-+|.+++.|++.|+|+|+.+.. .+..|.+.+-++.+
T Consensus 23 ~~R~~Gvllh~~SLp~~~GiGDfG~~a~~fvd~l~~~G~~~wQiLPL~~t~~~~~~~~SPYs~~S~falN 92 (523)
T d1x1na1 23 DRRRAGILLHPTSFPGPYGIGDLGPQAFKFLDWLHLAGCSLWQVLPLVPPGKRGNEDGSPYSGQDANCGN 92 (523)
T ss_dssp GCCEEEEECCGGGSCCTTSSCCSSHHHHHHHHHHHHHTCCEEECCCCSCBCCSSSCTTCTTSBSCSSSCC
T ss_pred CCcceEEEecCccCCCCCCCCcccHHHHHHHHHHHHcCCCEEEEeCCCCCCCCCCCCCCCcchhcchhcC
Confidence 34466889999873 33344899 889999999999999999999998753 23578877766655
|
| >d1ht6a1 b.71.1.1 (A:348-404) Plant alpha-amylase {Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Glycosyl hydrolase domain superfamily: Glycosyl hydrolase domain family: alpha-Amylases, C-terminal beta-sheet domain domain: Plant alpha-amylase species: Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]
Probab=97.95 E-value=1.6e-05 Score=52.87 Aligned_cols=53 Identities=36% Similarity=0.536 Sum_probs=45.1
Q ss_pred CCCCeEEEEecCCEEEEEECCEEEEEEcCCCCCCC--CCCcEEeeeCCceEEeeC
Q 014892 364 SRSSIKILEAQSNLYSAIIGDKVCMKIGDGSWCPA--GKEWTLATSGHKYAVWHK 416 (416)
Q Consensus 364 ~~G~~~~~~~~~~~~~~~R~~~~lvvinn~~~~~~--~~~~~~~ls~~~~~~~~~ 416 (416)
.+...+++.++.++|+...+++++|=|++....|+ +.+|+++.||++|+||+|
T Consensus 3 ~~S~v~I~~Ae~dlYaA~Id~kv~mKIGp~~d~~~~~p~~w~~a~sG~dYaVWek 57 (57)
T d1ht6a1 3 ATSALKILMHEGDAYVAEIDGKVVVKIGSRYDVGAVIPAGFVTSAHGNDYAVWEK 57 (57)
T ss_dssp TTCCEEEEEEETTEEEEEETTTEEEEESSCSCCGGGSCTTCEEEEEETTEEEEEC
T ss_pred CCceeEEEEcCCCcEEEEeCCeEEEEEeCcccCCCCCCCCcEEEeeCCcEEEEeC
Confidence 35678889999999999999999999999655442 357999999999999986
|
| >d1avaa1 b.71.1.1 (A:347-403) Plant alpha-amylase {Barley (Hordeum vulgare), seeds, AMY2 isozyme [TaxId: 4513]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Glycosyl hydrolase domain superfamily: Glycosyl hydrolase domain family: alpha-Amylases, C-terminal beta-sheet domain domain: Plant alpha-amylase species: Barley (Hordeum vulgare), seeds, AMY2 isozyme [TaxId: 4513]
Probab=97.94 E-value=1.3e-05 Score=53.20 Aligned_cols=52 Identities=37% Similarity=0.585 Sum_probs=45.4
Q ss_pred CCCeEEEEecCCEEEEEECCEEEEEEcCCCCCCC--CCCcEEeeeCCceEEeeC
Q 014892 365 RSSIKILEAQSNLYSAIIGDKVCMKIGDGSWCPA--GKEWTLATSGHKYAVWHK 416 (416)
Q Consensus 365 ~G~~~~~~~~~~~~~~~R~~~~lvvinn~~~~~~--~~~~~~~ls~~~~~~~~~ 416 (416)
+...+++.++.++|+...+++++|=|++....|+ .++|+++.||.+|+||+|
T Consensus 3 ~S~v~I~~Ae~dlY~A~Id~kv~~KIGp~~~~p~~~p~~w~~a~sG~dYaVWek 56 (57)
T d1avaa1 3 ESKLQIIEADADLYLAEIDGKVIVKLGPRYDVGNLIPGGFKVAAHGNDYAVWEK 56 (57)
T ss_dssp TCCEEEEEEETTEEEEEETTTEEEEESSCCCCGGGSCSSEEEEEEETTEEEEEE
T ss_pred CcceEEEEccCCcEEEEeCCeEEEEEcCcccCCCcCCCCcEEEeeCCCEEEEEe
Confidence 5677889999999999999999999999876663 357999999999999985
|
| >d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: YicI catalytic domain-like domain: Alpha-galactosidase GalA catalytic domain species: Thermotoga maritima [TaxId: 2336]
Probab=97.87 E-value=3.5e-06 Score=79.19 Aligned_cols=131 Identities=11% Similarity=0.135 Sum_probs=83.4
Q ss_pred cHHHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCC-CCCCCHHHHHHHHHHHHHCCCEEEEEEccccCcCCC
Q 014892 44 WWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLN-SSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTT 122 (416)
Q Consensus 44 ~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id-~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~ 122 (416)
+-+.|.+.++.++++|++.|+|=--+.. ..| |+ .++ .+|. +++.|++.+|++||++.+-+.+..++..+
T Consensus 21 ~e~~i~~~a~~~~~~g~~~i~iDdgW~~--~~g----d~-~~d~~~FP---glk~l~~~~h~~G~k~gl~~~p~~~~~~s 90 (348)
T d1zy9a2 21 TWEETLKNLKLAKNFPFEVFQIDDAYEK--DIG----DW-LVTRGDFP---SVEEMAKVIAENGFIPGIWTAPFSVSETS 90 (348)
T ss_dssp CHHHHHHHHHHGGGTTCSEEEECTTSEE--ETT----EE-EEECTTCC---CHHHHHHHHHHTTCEEEEEECTTEEETTC
T ss_pred CHHHHHHHHHHHHcCCCcEEEECccccc--CCC----Cc-eECcccCc---CHHHHHHHHHhcCCEEEEEeeeccccCCc
Confidence 5677888888999999999998432211 011 22 233 4565 58999999999999999998877665544
Q ss_pred CCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEeccc
Q 014892 123 QGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFA 198 (416)
Q Consensus 123 ~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a 198 (416)
+..... .+|.... .... ............-+|+.+|++++++.+.++.+. +.|||+|.+|..
T Consensus 91 ~~~~~~--------~~~~~~~----~~~~-~~~~~~~~~~~~~lD~~~p~~~~~~~~~~~~~~-~~Gvd~~K~D~~ 152 (348)
T d1zy9a2 91 DVFNEH--------PDWVVKE----NGEP-KMAYRNWNKKIYALDLSKDEVLNWLFDLFSSLR-KMGYRYFKIDFL 152 (348)
T ss_dssp HHHHHC--------GGGBCEE----TTEE-CEEEEETTEEEEEBCTTCHHHHHHHHHHHHHHH-HTTCCEEEECCG
T ss_pred HHHHhC--------ccceecc----CCCC-ccccccCCCCeeccCCCcHHHHHHHHHHHHHHH-hcCCCEEEeCCC
Confidence 321110 0111000 0000 000000011234479999999999999999876 899999999965
|
| >d1wzla2 b.71.1.1 (A:503-585) Maltogenic amylase {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Glycosyl hydrolase domain superfamily: Glycosyl hydrolase domain family: alpha-Amylases, C-terminal beta-sheet domain domain: Maltogenic amylase species: Thermoactinomyces vulgaris, TVAII [TaxId: 2026]
Probab=97.29 E-value=0.00011 Score=53.59 Aligned_cols=48 Identities=19% Similarity=0.326 Sum_probs=37.0
Q ss_pred CCeEEEEecC--CEEEEEE---CCEEEEEEcCCCCC-----C----CCCCcEEeeeCCceEE
Q 014892 366 SSIKILEAQS--NLYSAII---GDKVCMKIGDGSWC-----P----AGKEWTLATSGHKYAV 413 (416)
Q Consensus 366 G~~~~~~~~~--~~~~~~R---~~~~lvvinn~~~~-----~----~~~~~~~~ls~~~~~~ 413 (416)
|+++.+.+++ +++||.| +++++||+|+++.. | .+..|+++++|+.+.+
T Consensus 1 G~~~~l~ad~~~~v~af~R~~~~e~vlVv~N~s~~~~~v~lp~~~~~~~~~~dllsg~~~~~ 62 (83)
T d1wzla2 1 GNVRSWHADKQANLYAFVRTVQDQHVGVVLNNRGEKQTVLLQVPESGGKTWLDCLTGEEVHG 62 (83)
T ss_dssp CEEEEEEEETTTTEEEEEEEETTEEEEEEEECSSSCEEEEEECCGGGCSEEEETTTCCEEEC
T ss_pred CceEEEEECCCCCEEEEEEECCCCEEEEEEECCCccEEEEEcCccccceeeEEccCCcEEEe
Confidence 6788888864 6999999 77899999997643 1 2345888888888764
|
| >d2f2ha4 c.1.8.13 (A:248-585) Putative glucosidase YicI, domain 2 {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: YicI catalytic domain-like domain: Putative glucosidase YicI, domain 2 species: Escherichia coli [TaxId: 562]
Probab=97.23 E-value=0.00082 Score=62.10 Aligned_cols=137 Identities=9% Similarity=0.016 Sum_probs=83.4
Q ss_pred cHHHHHhhhhhHHHcC--CCEEEeCCCCCCCCCCCcccccCCCCC-CCCCCHHHHHHHHHHHHHCCCEEEEEEccccCcC
Q 014892 44 WWRNLERKVPDISKSG--FTSVWLPPATHSFAPEGYLPQNLYSLN-SSYGSEHLLKALLHKMKQHKVRAMADIVINHRVG 120 (416)
Q Consensus 44 ~~~gi~~~LdyLk~LG--v~~I~L~Pi~~~~~~~GY~~~d~~~id-~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~ 120 (416)
|-+.|.+.++.+++.| +++|+|-.-+.. +|...+ +..| .+|- |.++||+++|++|++|++-+.+ |++.
T Consensus 35 ~~~~v~~~~~~~r~~~iP~d~i~iD~~w~~----~~~~~~-f~~d~~~FP---dp~~~i~~l~~~G~~~~l~~~P-~i~~ 105 (338)
T d2f2ha4 35 DEATVNSFIDGMAERNLPLHVFHFDCFWMK----AFQWCD-FEWDPLTFP---DPEGMIRRLKAKGLKICVWINP-YIGQ 105 (338)
T ss_dssp CHHHHHHHHHHHHHTTCCCCEEEECGGGBC----TTCCSS-CCBCTTTCS---CHHHHHHHHHHTTCEEEEEECS-EECT
T ss_pred CHHHHHHHHHHHHHcCCCcceEEEcCchhc----CCCcCc-eeeCcccCC---CHHHHHHHHHHCCCeEEEeecC-ccCC
Confidence 4456788888888888 788888654332 122222 2223 2343 5789999999999999999765 4555
Q ss_pred CCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCC
Q 014892 121 TTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARG 200 (416)
Q Consensus 121 ~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~ 200 (416)
+++.+.. ... ..+ .....++.. ....+......-+|+.||++++...+.++..+ +.|||||-+|....
T Consensus 106 ~~~~~~~----~~~--~g~----~~~~~~g~~-~~~~~~~~~~~~~D~tnp~a~~w~~~~~~~~~-~~Gidg~w~D~~e~ 173 (338)
T d2f2ha4 106 KSPVFKE----LQE--KGY----LLKRPDGSL-WQWDKWQPGLAIYDFTNPDACKWYADKLKGLV-AMGVDCFKTDFGER 173 (338)
T ss_dssp TSTTHHH----HHH--HTC----BCBCTTSSB-CCBSSSSTTBEEBCTTSHHHHHHHHHHHHHHH-HTTCCEEEECCCCC
T ss_pred CChhHHH----HHh--CCE----EEECCCCCc-eeeecCCCCccccccCCHHHHHHHHHHhhccc-ccCCceEEecCCCC
Confidence 5432110 000 000 000011110 00111123344579999999999999999887 89999999997654
Q ss_pred C
Q 014892 201 Y 201 (416)
Q Consensus 201 ~ 201 (416)
.
T Consensus 174 ~ 174 (338)
T d2f2ha4 174 I 174 (338)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >d1eswa_ c.1.8.1 (A:) Amylomaltase MalQ {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Amylomaltase MalQ species: Thermus aquaticus [TaxId: 271]
Probab=97.22 E-value=0.00089 Score=65.07 Aligned_cols=64 Identities=9% Similarity=-0.003 Sum_probs=48.8
Q ss_pred cCceeEEEeeec-CCCCCCcH-HHHHhhhhhHHHcCCCEEEeCCCCCCC-CCCCcccccCCCCCCCC
Q 014892 26 NGREILFQGFNW-ESCKHDWW-RNLERKVPDISKSGFTSVWLPPATHSF-APEGYLPQNLYSLNSSY 89 (416)
Q Consensus 26 ~~~~~~~q~f~~-~~~~~G~~-~gi~~~LdyLk~LGv~~I~L~Pi~~~~-~~~GY~~~d~~~id~~~ 89 (416)
-+.||++|+|== ....=||| +++.+-+|.+++.|++.++|+|+.+.. ....|++.+-++++|-|
T Consensus 5 R~~Gvllh~~SLp~~~GiGdfG~~a~~fid~l~~~G~~~wQiLPl~pt~~~~SPYs~~S~fAlNPly 71 (500)
T d1eswa_ 5 RAFGLLLHPTSLPGPYGVGVLGREARDFLRFLKEAGGRYWQVLPLGPTGYGDSPYQSFSAFAGNPYL 71 (500)
T ss_dssp SEEEEECCGGGSCCSSSSCCSSHHHHHHHHHHHHTTCCEEECCCCSCBCTTCCTTSBSCSSCCCGGG
T ss_pred cceeeEeCccccCCCCCCcchhHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCCcCcccchhcCHHH
Confidence 345788888763 22334899 899999999999999999999999754 24578887777776433
|
| >d1ji1a2 b.71.1.1 (A:555-637) Maltogenic amylase {Thermoactinomyces vulgaris, TVAI [TaxId: 2026]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Glycosyl hydrolase domain superfamily: Glycosyl hydrolase domain family: alpha-Amylases, C-terminal beta-sheet domain domain: Maltogenic amylase species: Thermoactinomyces vulgaris, TVAI [TaxId: 2026]
Probab=96.96 E-value=0.00049 Score=49.82 Aligned_cols=47 Identities=26% Similarity=0.385 Sum_probs=36.0
Q ss_pred CeEEEEecC--CEEEEEE---CCEEEEEEcCCCCC------------CCCCCcEEeeeCCceEE
Q 014892 367 SIKILEAQS--NLYSAII---GDKVCMKIGDGSWC------------PAGKEWTLATSGHKYAV 413 (416)
Q Consensus 367 ~~~~~~~~~--~~~~~~R---~~~~lvvinn~~~~------------~~~~~~~~~ls~~~~~~ 413 (416)
+++.+.+++ ++++|.| +++++|++|++... +++..|+++++|..|.+
T Consensus 1 sf~~l~ad~~~~v~ay~R~~~~e~vlV~~N~s~~~~~v~l~~~~~~~~~~~~~~dll~g~~~~v 64 (83)
T d1ji1a2 1 SFMTLITDDTNKIYSYGRFDNVNRIAVVLNNDSVSHTVNVPVWQLSMPNGSTVTDKITGHSYTV 64 (83)
T ss_dssp EEEEEEEETTTTEEEEEEECSSCEEEEEEECSSSCEEEEECGGGGTCCTTCEEEETTTCCEEEC
T ss_pred CcEEEEecCCCCEEEEEEEcCCcEEEEEEeCCCCCEEEEecccccccccCcEEEEccCCCEEEE
Confidence 366777764 6999998 78999999997632 23456999999988865
|
| >d1ea9c2 b.71.1.1 (C:504-583) Maltogenic amylase {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Glycosyl hydrolase domain superfamily: Glycosyl hydrolase domain family: alpha-Amylases, C-terminal beta-sheet domain domain: Maltogenic amylase species: Bacillus sp., cyclomaltodextrinase [TaxId: 1409]
Probab=96.75 E-value=0.00064 Score=48.83 Aligned_cols=45 Identities=16% Similarity=0.240 Sum_probs=31.3
Q ss_pred eEEEEecC--CEEEEEE---CCEEEEEEcCCCCC-----C-CCCCcEEeeeCCceE
Q 014892 368 IKILEAQS--NLYSAII---GDKVCMKIGDGSWC-----P-AGKEWTLATSGHKYA 412 (416)
Q Consensus 368 ~~~~~~~~--~~~~~~R---~~~~lvvinn~~~~-----~-~~~~~~~~ls~~~~~ 412 (416)
++++.+++ +++||.| +++++||+|++... | .+++|+++++|..+.
T Consensus 2 f~~L~a~~d~~v~ay~R~~~~e~vlVv~N~S~~~~tv~lp~~~~~~~~l~~g~~~~ 57 (80)
T d1ea9c2 2 FKFLTAEKNSRQIAYLREDDQDTILVVMNNDKAGHTLTLPVRHAQWTHLWQDDVLT 57 (80)
T ss_dssp CCCSBCCSSCCEEEEEEECSSCEEEEEEECSSSCEEEEEECCSSSCCEEBSTTCCE
T ss_pred eEEEecCCCCCEEEEEEecCCCEEEEEEECCCCCEEEEecCCCCeEEEeecCceee
Confidence 44555543 6999998 78999999997643 2 345677777776654
|
| >d1j0ha2 b.71.1.1 (A:506-588) Neopullulanase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Glycosyl hydrolase domain superfamily: Glycosyl hydrolase domain family: alpha-Amylases, C-terminal beta-sheet domain domain: Neopullulanase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.73 E-value=0.0024 Score=45.91 Aligned_cols=30 Identities=20% Similarity=0.181 Sum_probs=24.8
Q ss_pred CCeEEEEecC--CEEEEEE---CCEEEEEEcCCCC
Q 014892 366 SSIKILEAQS--NLYSAII---GDKVCMKIGDGSW 395 (416)
Q Consensus 366 G~~~~~~~~~--~~~~~~R---~~~~lvvinn~~~ 395 (416)
|+++++.+++ +++||.| +++++|++|++..
T Consensus 1 G~~~~l~~~d~~~v~ay~R~~~~~~vLVv~N~S~~ 35 (83)
T d1j0ha2 1 GEISFLHADDEMNYLIYKKTDGDETVLVIINRSDQ 35 (83)
T ss_dssp CEEEEECCSCTTTEEEEEEECSSCEEEEEEECSSS
T ss_pred CceEEEecCCCCCEEEEEEECCCCEEEEEEeCCCC
Confidence 7888998754 6999999 7899999999653
|
| >d1ecea_ c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellulolyticus [TaxId: 28049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endocellulase E1 species: Acidothermus cellulolyticus [TaxId: 28049]
Probab=96.44 E-value=0.0037 Score=57.41 Aligned_cols=87 Identities=20% Similarity=0.365 Sum_probs=58.1
Q ss_pred ccCceeEEEeeecCC------CCCC-cHHHHHhhhhhHHHcCCCEEEeCCCCCC---CCCCCcccccCCCCCCCC---CC
Q 014892 25 RNGREILFQGFNWES------CKHD-WWRNLERKVPDISKSGFTSVWLPPATHS---FAPEGYLPQNLYSLNSSY---GS 91 (416)
Q Consensus 25 ~~~~~~~~q~f~~~~------~~~G-~~~gi~~~LdyLk~LGv~~I~L~Pi~~~---~~~~GY~~~d~~~id~~~---Gt 91 (416)
..|+.+.+++..|-- ...| +-.-+.+-++.||++|+|+|=| ||.-. +..-.+... .++.++.+ ..
T Consensus 16 ~~G~~~~l~GvN~~g~~~~~~~~~~~~~~~~~~~~~~i~~~G~N~VRl-pv~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 93 (358)
T d1ecea_ 16 ANNVPVRIAGINWFGFETCNYVVHGLWSRDYRSMLDQIKSLGYNTIRL-PYSDDILKPGTMPNSIN-FYQMNQDLQGLTS 93 (358)
T ss_dssp TTSCEECCEEEECCCBTTTTCSCTTTTTSCHHHHHHHHHHTTCCEEEE-EEEGGGGSTTCCCCSCC-CSSSCTTTTTCCH
T ss_pred CCCCEEEEEEEccCcccccccccccCCccHHHHHHHHHHHcCCCEEEe-cCcHHHccCCCCCCCcc-ccccChhhhchhH
Confidence 568888889988721 1122 3334778899999999999988 43211 011111222 23444443 34
Q ss_pred HHHHHHHHHHHHHCCCEEEEEE
Q 014892 92 EHLLKALLHKMKQHKVRAMADI 113 (416)
Q Consensus 92 ~~d~~~Lv~~aH~~Gi~VilD~ 113 (416)
.+-|+++|+.|+++||+||+|+
T Consensus 94 ~~~ld~~v~~a~~~Gl~Vildl 115 (358)
T d1ecea_ 94 LQVMDKIVAYAGQIGLRIILDR 115 (358)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHCCCceeeec
Confidence 7889999999999999999998
|
| >d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exomannosidase species: Cellvibrio mixtus [TaxId: 39650]
Probab=96.40 E-value=0.0075 Score=55.62 Aligned_cols=86 Identities=10% Similarity=0.154 Sum_probs=58.6
Q ss_pred cCceeEEEeeecC-------CCCCCcHHHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCC-----HH
Q 014892 26 NGREILFQGFNWE-------SCKHDWWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGS-----EH 93 (416)
Q Consensus 26 ~~~~~~~q~f~~~-------~~~~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt-----~~ 93 (416)
+|..+.+.++.+- .....+-..+.+.|+.||+||+|+|=+....+.. .++...+-.+.+..|. .+
T Consensus 14 nG~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~l~~~k~~G~N~iR~~~~~~~~---~~~~~~~~~~~~~~g~~de~gl~ 90 (410)
T d1uuqa_ 14 QGKPYVITGVNMWYAAYLGAPNEVGDRDRLAKELDNLKAIGVNNLRVLAVSEKS---EINSAVKPAVTNGFGNYDETLLQ 90 (410)
T ss_dssp TTEEECEEEEECTTHHHHTCSSTTCCHHHHHHHHHHHHHTTCCEEEEECCCBCC---CSTTSCSSCSBSSTTCBCHHHHH
T ss_pred CCEEEEEEEEecCCcccccccCCCCCHHHHHHHHHHHHHCCCcEEEeCCccccc---ccccccCCCcccccccccHHHHH
Confidence 6777888888631 1122377888999999999999998653222211 1112223344455554 56
Q ss_pred HHHHHHHHHHHCCCEEEEEEc
Q 014892 94 LLKALLHKMKQHKVRAMADIV 114 (416)
Q Consensus 94 d~~~Lv~~aH~~Gi~VilD~V 114 (416)
.+.+++++|+++||+||+|+.
T Consensus 91 ~~d~~l~~a~~~Gi~vi~~l~ 111 (410)
T d1uuqa_ 91 GLDYLLVELAKRDMTVVLYFN 111 (410)
T ss_dssp HHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHcCCeeEEecc
Confidence 689999999999999999985
|
| >d1x7fa2 c.1.8.12 (A:1-244) Outer surface protein, N-terminal domain {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Outer surface protein, N-terminal domain domain: Outer surface protein, N-terminal domain species: Bacillus cereus [TaxId: 1396]
Probab=96.18 E-value=0.0024 Score=55.47 Aligned_cols=59 Identities=8% Similarity=0.122 Sum_probs=39.7
Q ss_pred cHHHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccc
Q 014892 44 WWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVIN 116 (416)
Q Consensus 44 ~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~N 116 (416)
+.+...+-|+-.++.|++.|+.+=..+.. +..+ -.+.|++|++.||+.||+||+|+.++
T Consensus 15 ~~e~~~~yi~~a~~~Gf~~iFTSL~~~e~-----~~~~---------~~~~~~~l~~~a~~~g~~vi~DIsp~ 73 (244)
T d1x7fa2 15 TKEKDMAYISAAARHGFSRIFTCLLSVNR-----PKEE---------IVAEFKEIINHAKDNNMEVILDVAPA 73 (244)
T ss_dssp CHHHHHHHHHHHHTTTEEEEEEEECCC----------------------HHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CHHHHHHHHHHHHHCCCCEEEecCccCCC-----CHHH---------HHHHHHHHHHHHHHCCCEEEEEcCHH
Confidence 45556666677778999999863211110 0111 25779999999999999999999776
|
| >d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel (Mytilus edulis) [TaxId: 6550]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: endo-1,4-beta-mannosidase species: Blue mussel (Mytilus edulis) [TaxId: 6550]
Probab=96.15 E-value=0.0054 Score=55.20 Aligned_cols=84 Identities=19% Similarity=0.248 Sum_probs=54.6
Q ss_pred ccCceeEEEeeecC---C----CCCC---cHHHHHhhhhhHHHcCCCEEEeCCCCCCC-----CCCCcccccCCCCCCCC
Q 014892 25 RNGREILFQGFNWE---S----CKHD---WWRNLERKVPDISKSGFTSVWLPPATHSF-----APEGYLPQNLYSLNSSY 89 (416)
Q Consensus 25 ~~~~~~~~q~f~~~---~----~~~G---~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~-----~~~GY~~~d~~~id~~~ 89 (416)
.+|..+.+++..+. . ...+ +.+.+.+.|++||++|+|+|=+....... ...+. ...+++
T Consensus 11 ~nG~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~G~N~vRv~~~~~~~~~~~~~~~~~----~~~~~~-- 84 (350)
T d2c0ha1 11 YNGHHIFLSGANQAWVNYARDFGHNQYSKGKSTFESTLSDMQSHGGNSVRVWLHIEGESTPEFDNNGY----VTGIDN-- 84 (350)
T ss_dssp ETTEEECEEEEECCCSSTTCSSSTTCHHHHHHHHHHHHHHHHHTTCCEEEEEEEETTSSSSEECTTSC----EEECCT--
T ss_pred ECCEEEEEEEEecCCcccccccCcccCCCCHHHHHHHHHHHHHcCCCEEEECcccCccCCcccccCCC----CCccCh--
Confidence 37888888888752 1 1111 45667788999999999999652111110 11111 111222
Q ss_pred CCHHHHHHHHHHHHHCCCEEEEEEc
Q 014892 90 GSEHLLKALLHKMKQHKVRAMADIV 114 (416)
Q Consensus 90 Gt~~d~~~Lv~~aH~~Gi~VilD~V 114 (416)
...+.++++++.|.++||+||+|+.
T Consensus 85 ~~~~~~d~~~~~a~~~gi~vi~d~~ 109 (350)
T d2c0ha1 85 TLISDMRAYLHAAQRHNILIFFTLW 109 (350)
T ss_dssp THHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred hhhHHHHHHHHHHHHCCCEEEEEec
Confidence 2368899999999999999999984
|
| >d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Trichoderma reesei [TaxId: 51453]
Probab=96.14 E-value=0.0054 Score=55.73 Aligned_cols=89 Identities=16% Similarity=0.137 Sum_probs=55.7
Q ss_pred cCceeEEEeeecC-CCCCCcHHHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCCCCC-------CCHHHHHH
Q 014892 26 NGREILFQGFNWE-SCKHDWWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSY-------GSEHLLKA 97 (416)
Q Consensus 26 ~~~~~~~q~f~~~-~~~~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~-------Gt~~d~~~ 97 (416)
+|..+.+.+..+- .....+-..+.+.|+.||++|+|+|=+.-.......+-+....+..++..- -..+.+.+
T Consensus 15 nG~p~~~~G~N~~~~~~~~~~~~~~~~l~~~~~~G~N~iR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ld~ 94 (344)
T d1qnra_ 15 DGKVGYFAGTNCYWCSFLTNHADVDSTFSHISSSGLKVVRVWGFNDVNTQPSPGQIWFQKLSATGSTINTGADGLQTLDY 94 (344)
T ss_dssp TTEESCEEEEECGGGGGCCCHHHHHHHHHHHHHTTCCEEECCCCCEESSCCSTTCCCSEECCTTCCEECCSTTTTHHHHH
T ss_pred CCEEEEEEEEccCCCCcCCCHHHHHHHHHHHHhcCCCEEEECCcccccccCCCCccchhhcccccCccccCHHHHHHHHH
Confidence 6777777776532 222345677899999999999999976211111111111111111221111 13578999
Q ss_pred HHHHHHHCCCEEEEEEc
Q 014892 98 LLHKMKQHKVRAMADIV 114 (416)
Q Consensus 98 Lv~~aH~~Gi~VilD~V 114 (416)
++++|+++||+||+|+.
T Consensus 95 ~~~~a~~~Gi~vi~~l~ 111 (344)
T d1qnra_ 95 VVQSAEQHNLKLIIPFV 111 (344)
T ss_dssp HHHHHHHHTCEEEEESC
T ss_pred HHHHHHHcCCeeEeecc
Confidence 99999999999999986
|
| >d1cxla3 b.71.1.1 (A:407-496) Cyclodextrin glycosyltransferase {Bacillus circulans, different strains [TaxId: 1397]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Glycosyl hydrolase domain superfamily: Glycosyl hydrolase domain family: alpha-Amylases, C-terminal beta-sheet domain domain: Cyclodextrin glycosyltransferase species: Bacillus circulans, different strains [TaxId: 1397]
Probab=96.02 E-value=0.002 Score=46.81 Aligned_cols=28 Identities=4% Similarity=-0.047 Sum_probs=24.7
Q ss_pred CCeEEEEecCCEEEEEE---CCEEEEEEcCC
Q 014892 366 SSIKILEAQSNLYSAII---GDKVCMKIGDG 393 (416)
Q Consensus 366 G~~~~~~~~~~~~~~~R---~~~~lvvinn~ 393 (416)
|+++.++.++++++|.| ++.++|+||.+
T Consensus 1 G~~~~rw~~~DvyvyeR~~g~~~vlVAiNr~ 31 (90)
T d1cxla3 1 GSTQERWINNDVLIYERKFGSNVAVVAVNRN 31 (90)
T ss_dssp CEEEEEEECSSEEEEEEEETTEEEEEEEECC
T ss_pred CccEEEEECCCEEEEEEEcCCCEEEEEEECC
Confidence 67889999999999998 67899999974
|
| >d3bmva3 b.71.1.1 (A:407-495) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Glycosyl hydrolase domain superfamily: Glycosyl hydrolase domain family: alpha-Amylases, C-terminal beta-sheet domain domain: Cyclodextrin glycosyltransferase species: Thermoanaerobacterium [TaxId: 28895]
Probab=95.86 E-value=0.0027 Score=46.06 Aligned_cols=29 Identities=7% Similarity=0.014 Sum_probs=24.8
Q ss_pred CCeEEEEecCCEEEEEE---CCEEEEEEcCCC
Q 014892 366 SSIKILEAQSNLYSAII---GDKVCMKIGDGS 394 (416)
Q Consensus 366 G~~~~~~~~~~~~~~~R---~~~~lvvinn~~ 394 (416)
|+++.++.++++++|.| ++.++|+||.+.
T Consensus 1 G~~~~~~in~DvyvyeR~~~~~~vlVAiNr~~ 32 (89)
T d3bmva3 1 GTTQQRWINNDVYIYERKFGNNVALVAINRNL 32 (89)
T ss_dssp CEEEEEEECSSEEEEEEEETTEEEEEEEECCS
T ss_pred CceeEEEECCCEEEEEEecCCcEEEEEEECCC
Confidence 67888999999999988 667899999853
|
| >d1cyga3 b.71.1.1 (A:403-491) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Glycosyl hydrolase domain superfamily: Glycosyl hydrolase domain family: alpha-Amylases, C-terminal beta-sheet domain domain: Cyclodextrin glycosyltransferase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=95.77 E-value=0.0031 Score=45.71 Aligned_cols=29 Identities=14% Similarity=0.091 Sum_probs=25.2
Q ss_pred CCeEEEEecCCEEEEEE---CCEEEEEEcCCC
Q 014892 366 SSIKILEAQSNLYSAII---GDKVCMKIGDGS 394 (416)
Q Consensus 366 G~~~~~~~~~~~~~~~R---~~~~lvvinn~~ 394 (416)
|+++.++.++++++|.| ++.++|+||.+.
T Consensus 1 Gs~~~rwi~~DvyvyeR~fg~~~vlVAiNr~~ 32 (89)
T d1cyga3 1 GDTEQRWINGDVYVYERQFGKDVVLVAVNRSS 32 (89)
T ss_dssp CEEEEEEECSSEEEEEEEETTEEEEEEEECCS
T ss_pred CceeEEEECCCEEEEEEecCCcEEEEEEECCC
Confidence 67888999999999998 678999999853
|
| >d1ceoa_ c.1.8.3 (A:) Endoglucanase CelC {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase CelC species: Clostridium thermocellum [TaxId: 1515]
Probab=95.69 E-value=0.019 Score=52.29 Aligned_cols=58 Identities=17% Similarity=0.250 Sum_probs=38.7
Q ss_pred HhhhhhHHHcCCCEEEeCCCCCCCCCCCccccc-CCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Q 014892 49 ERKVPDISKSGFTSVWLPPATHSFAPEGYLPQN-LYSLNSSYGSEHLLKALLHKMKQHKVRAMADI 113 (416)
Q Consensus 49 ~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d-~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~ 113 (416)
.+-++.||++|+|+|=| ||.-. .+.+.+ ...+++ +..+.|+++|+.|+++||+||+|+
T Consensus 31 e~d~~~i~~~G~n~vRl-pi~~~----~~~~~~~~~~~~~--~~~~~ld~~v~~a~~~gi~vild~ 89 (340)
T d1ceoa_ 31 EKDIETIAEAGFDHVRL-PFDYP----IIESDDNVGEYKE--DGLSYIDRCLEWCKKYNLGLVLDM 89 (340)
T ss_dssp HHHHHHHHHHTCCEEEE-EEEGG----GTBCSSSTTCBCH--HHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEe-ecCHH----HhccCCCCCccCH--HHHHHHHHHHHHHHHcCCEEEEEe
Confidence 56689999999999998 44211 000000 001111 125679999999999999999998
|
| >d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Tomato (Lycopersicon esculentum) [TaxId: 4081]
Probab=95.56 E-value=0.0085 Score=54.64 Aligned_cols=134 Identities=15% Similarity=0.118 Sum_probs=74.0
Q ss_pred cCceeEEEeee--cCC---CCCCcHHHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCHHHHHHHHH
Q 014892 26 NGREILFQGFN--WES---CKHDWWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLH 100 (416)
Q Consensus 26 ~~~~~~~q~f~--~~~---~~~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~ 100 (416)
+|..++++++. |.. ...-+-+.+.+.|+.+|++|+|+|=+....... ...+.+.. -..+ ....+.|+++++
T Consensus 14 nG~~~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~~k~~G~N~vR~~~~~~~~-~~~~~~~~-g~~~--~~~l~~ld~~l~ 89 (370)
T d1rh9a1 14 NGKSLYINGFNAYWLMYIAYDPSTRIKVTNTFQQASKYKMNVARTWAFSHGG-SRPLQSAP-GVYN--EQMFQGLDFVIS 89 (370)
T ss_dssp TTEEECEEEEECTTHHHHHHSTTTTHHHHHHHHHHHHTTCCEEEEESSCSSS-SSCSEEET-TEEC--HHHHHHHHHHHH
T ss_pred CCEEEEEEEEecccCcccccCCCCHHHHHHHHHHHHHCCCeEEEECCccCcc-CcccCCCC-Cccc--HHHHHHHHHHHH
Confidence 67788888875 210 011244568888999999999999763211111 00100000 0000 113688999999
Q ss_pred HHHHCCCEEEEEEccccCcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHH
Q 014892 101 KMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAW 180 (416)
Q Consensus 101 ~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~ 180 (416)
.|.++||+||+|+... ... .+....+.+ |... .+. ...-.+..+.+|.+++.+++.
T Consensus 90 ~a~~~Gi~vi~~l~~~-~~~--~~~~~~~~~-------~~~~------~~~--------~~~~~~~~~~~~~~~~~~~~~ 145 (370)
T d1rh9a1 90 EAKKYGIHLIMSLVNN-WDA--FGGKKQYVE-------WAVQ------RGQ--------KLTSDDDFFTNPMVKGFYKNN 145 (370)
T ss_dssp HHHHTTCEEEEECCBS-SSS--SSBHHHHHH-------HHHH------TTC--------CCCCGGGGGTCHHHHHHHHHH
T ss_pred HHHHcCCEEEEecccc-ccc--ccCCccccc-------cccc------CCC--------cCCccccccCCHHHHHHHHHH
Confidence 9999999999998532 111 000000000 0000 000 011223456789999999999
Q ss_pred HHHHHHh
Q 014892 181 LRWLRNT 187 (416)
Q Consensus 181 ~~~w~~~ 187 (416)
++..++.
T Consensus 146 ~~~~v~r 152 (370)
T d1rh9a1 146 VKVVLTR 152 (370)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 8888854
|
| >d1foba_ c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-1,4-galactanase species: Fungus (Aspergillus aculeatus) [TaxId: 5053]
Probab=95.22 E-value=0.03 Score=51.13 Aligned_cols=52 Identities=10% Similarity=0.037 Sum_probs=40.4
Q ss_pred hhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEcc
Q 014892 50 RKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVI 115 (416)
Q Consensus 50 ~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~ 115 (416)
+-+..||+.|||.|=|- ++..+. . ..-+.+.++++++.|+++||+|++|+..
T Consensus 31 d~~~~lk~~G~n~VRlr-vW~~p~-~------------g~~~~~~~~~~~~~a~~~Gm~vll~~hy 82 (334)
T d1foba_ 31 ALETILADAGINSIRQR-VWVNPS-D------------GSYDLDYNLELAKRVKAAGMSLYLDLHL 82 (334)
T ss_dssp CHHHHHHHHTCCEEEEE-ECSCCT-T------------CTTCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cHHHHHHHcCCCEEEee-eeeCCC-C------------CcCcHHHHHHHHHHHHHCCCEEEEEecC
Confidence 34677899999999864 653322 1 2236899999999999999999999944
|
| >d1h4pa_ c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exo-beta-(1,3)-glucanase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.20 E-value=0.056 Score=50.63 Aligned_cols=58 Identities=19% Similarity=0.393 Sum_probs=39.0
Q ss_pred hhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCC--CHHHHHHHHHHHHHCCCEEEEEEccccCcC
Q 014892 52 VPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYG--SEHLLKALLHKMKQHKVRAMADIVINHRVG 120 (416)
Q Consensus 52 LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~G--t~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~ 120 (416)
++.||++|+|+|=|+ | ||+......-++.+. ..+-|+++|+.|.++||+||||+ |..+
T Consensus 79 ~~~i~~~G~N~VRiP-i-------~~~~~~~~~~~~~~~~~~~~~ld~~v~~a~~~gl~VilDl---H~~p 138 (408)
T d1h4pa_ 79 FANIASQGFNLVRIP-I-------GYWAFQILDDDPYVSGLQESYLDQAIGWARNNSLKVWVDL---HGAA 138 (408)
T ss_dssp HHHHHHTTCCEEEEE-E-------EGGGTCCCTTCCCCCSSHHHHHHHHHHHHHHTTCEEEEEE---EECT
T ss_pred HHHHHHCCCCEEEEe-c-------cHHHhcCCCCCCCcChhHHHHHHHHHHHHHHCCCEEEEEe---CCCC
Confidence 789999999999885 2 111110001112222 25679999999999999999998 5544
|
| >d1ur4a_ c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus licheniformis [TaxId: 1402]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-1,4-galactanase species: Bacillus licheniformis [TaxId: 1402]
Probab=95.11 E-value=0.028 Score=52.29 Aligned_cols=57 Identities=9% Similarity=0.053 Sum_probs=39.5
Q ss_pred hhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Q 014892 51 KVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADI 113 (416)
Q Consensus 51 ~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~ 113 (416)
-++.||+.|||+|=| |++-.+..+...+ +. ...-..+.++++++.||++||+||+|+
T Consensus 43 ~~~~lk~~G~n~VRl-~vw~~~~~~~~~~---~~--~g~~~l~~~~~~~~~a~~~Gl~v~ldl 99 (387)
T d1ur4a_ 43 IFKTLKEAGVNYVRV-RIWNDPYDANGNG---YG--GGNNDLEKAIQIGKRATANGMKLLADF 99 (387)
T ss_dssp HHHHHHHTTCCEEEE-EECSCCBCTTCCB---CS--TTCCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHcCCCEEEe-ecccCCcccccCc---CC--CccccHHHHHHHHHHHHHCCCEEEEEe
Confidence 488899999999985 5554332211000 00 011138899999999999999999998
|
| >d1hjsa_ c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-1,4-galactanase species: Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]
Probab=95.00 E-value=0.016 Score=52.41 Aligned_cols=51 Identities=12% Similarity=0.022 Sum_probs=39.6
Q ss_pred HhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Q 014892 49 ERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADI 113 (416)
Q Consensus 49 ~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~ 113 (416)
.+-++.||+.|||+|=|. ++..+. . .....+.++++|+.|+++||+||+|+
T Consensus 30 ~~~~~~lk~~G~n~VRi~-vW~~p~-~------------g~~~~~~~~~~v~~a~~~gl~vil~~ 80 (332)
T d1hjsa_ 30 QPLENILAANGVNTVRQR-VWVNPA-D------------GNYNLDYNIAIAKRAKAAGLGVYIDF 80 (332)
T ss_dssp CCHHHHHHHTTCCEEEEE-ECSSCT-T------------CTTSHHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccHHHHHHHcCCCEEEee-eeecCC-C------------CccCHHHHHHHHHHHHHCCCEEEEEe
Confidence 445678999999999874 653221 1 12358999999999999999999998
|
| >d1wkya2 c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 244966]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Bacillus sp. JAMB-602 [TaxId: 244966]
Probab=94.85 E-value=0.022 Score=50.60 Aligned_cols=73 Identities=14% Similarity=0.301 Sum_probs=49.7
Q ss_pred ccCceeEEEeeecCCCCCCcHHHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCHHHHHHHHHHHHH
Q 014892 25 RNGREILFQGFNWESCKHDWWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQ 104 (416)
Q Consensus 25 ~~~~~~~~q~f~~~~~~~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~ 104 (416)
.+|..+++++-.+...- +=.-..+.++.||++|+|+|=| |+.+. ++... +..+.++++|+.|.+
T Consensus 13 ~nG~~~~l~Gvn~~~~~--~~~~~~~d~~~~~~~G~N~VRl-~~~~~----~~~~~---------~~~~~ld~~v~~a~~ 76 (297)
T d1wkya2 13 ANGNPFVMRGINHGHAW--YKDQATTAIEGIANTGANTVRI-VLSDG----GQWTK---------DDIQTVRNLISLAED 76 (297)
T ss_dssp TTSCBCCCEEEEECGGG--CGGGHHHHHHHHHTTTCSEEEE-EECCS----SSSCC---------CCHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEeccCccc--CchHHHHHHHHHHHCCCcEEEE-eccCC----CccCc---------cHHHHHHHHHHHHHH
Confidence 36777777776542111 1223567799999999999876 33322 11111 247889999999999
Q ss_pred CCCEEEEEE
Q 014892 105 HKVRAMADI 113 (416)
Q Consensus 105 ~Gi~VilD~ 113 (416)
+||+||+|+
T Consensus 77 ~Gi~vildl 85 (297)
T d1wkya2 77 NNLVAVLEV 85 (297)
T ss_dssp TTCEEEEEE
T ss_pred CCCceEeec
Confidence 999999998
|
| >d7a3ha_ c.1.8.3 (A:) Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId: 76935]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase Cel5a species: Bacillus agaradhaerens [TaxId: 76935]
Probab=94.78 E-value=0.026 Score=50.47 Aligned_cols=77 Identities=10% Similarity=0.085 Sum_probs=49.3
Q ss_pred ccCceeEEEeeecCCCC-CCcHHHHHhhhhhHH-HcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCHHHHHHHHHHH
Q 014892 25 RNGREILFQGFNWESCK-HDWWRNLERKVPDIS-KSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKM 102 (416)
Q Consensus 25 ~~~~~~~~q~f~~~~~~-~G~~~gi~~~LdyLk-~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~a 102 (416)
.+|.++++++..+--.. .+.+. -.+.++.|+ ++|+|+|=| |+++... .+..+|.+ .+.++++|+.|
T Consensus 19 ~nG~~v~lrGvn~~~~~~~~~~~-~~~~~~~l~~~~G~N~VR~-~~~~~~~--------~~~~~~~~--~~~ld~~v~~a 86 (300)
T d7a3ha_ 19 ERGEQVQLKGMSSHGLQWYGQFV-NYESMKWLRDDWGINVFRA-AMYTSSG--------GYIDDPSV--KEKVKEAVEAA 86 (300)
T ss_dssp TTSCBCCCEEEEESCHHHHGGGC-SHHHHHHHHHHTCCCEEEE-EEESSTT--------STTTCTTH--HHHHHHHHHHH
T ss_pred CCCCEEEEEEEeCCCcccccccC-CHHHHHHHHHHcCCCEEEE-eeEcCcc--------CcccCHHH--HHHHHHHHHHH
Confidence 47888888887642000 00000 133455564 799999988 4443321 23344533 77899999999
Q ss_pred HHCCCEEEEEE
Q 014892 103 KQHKVRAMADI 113 (416)
Q Consensus 103 H~~Gi~VilD~ 113 (416)
.++||.||+|+
T Consensus 87 ~~~Gl~Vild~ 97 (300)
T d7a3ha_ 87 IDLDIYVIIDW 97 (300)
T ss_dssp HHHTCEEEEEE
T ss_pred HHCCCEEEEee
Confidence 99999999997
|
| >d1edga_ c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellulolyticum [TaxId: 1521]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase CelA species: Clostridium cellulolyticum [TaxId: 1521]
Probab=94.74 E-value=0.0091 Score=55.61 Aligned_cols=58 Identities=12% Similarity=0.297 Sum_probs=41.6
Q ss_pred HhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Q 014892 49 ERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADI 113 (416)
Q Consensus 49 ~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~ 113 (416)
.+.++.||++|||+|=| ||. ...+....-|.+++.+ ++.++++|+.|+++||+||||+
T Consensus 64 ~~~i~~ik~~Gfn~vRi-Pv~----w~~~~~~~~~~i~~~~--l~~v~~vV~~a~~~Gl~VIldl 121 (380)
T d1edga_ 64 KQMIDAIKQKGFNTVRI-PVS----WHPHVSGSDYKISDVW--MNRVQEVVNYCIDNKMYVILNT 121 (380)
T ss_dssp HHHHHHHHHHTCCEEEE-CCC----CGGGEETTTTEECHHH--HHHHHHHHHHHHTTTCEEEEEC
T ss_pred HHHHHHHHHcCCCEEEE-ccc----HHHhcCCCCCccCHHH--HHHHHHHHHHHHHcCCEEEEec
Confidence 56689999999999988 442 1222111124555432 5779999999999999999997
|
| >d1bqca_ c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Thermomonospora fusca [TaxId: 2021]
Probab=94.57 E-value=0.017 Score=51.46 Aligned_cols=72 Identities=18% Similarity=0.377 Sum_probs=48.5
Q ss_pred ccCceeEEEeeecCCCCCCcHHHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCHHHHHHHHHHHHH
Q 014892 25 RNGREILFQGFNWESCKHDWWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQ 104 (416)
Q Consensus 25 ~~~~~~~~q~f~~~~~~~G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~ 104 (416)
.+|..+++++-.+... ++....+.++.||++|+|+|=|. +.... .+ .....+.++++|+.|.+
T Consensus 14 ~nG~~~~lrGvn~~~~---~~~~~~~~~~~i~~~G~N~VRl~-~~~~~---------~~----~~~~~~~~~~~v~~a~~ 76 (302)
T d1bqca_ 14 ANGQEFIIRGVSHPHN---WYPQHTQAFADIKSHGANTVRVV-LSNGV---------RW----SKNGPSDVANVISLCKQ 76 (302)
T ss_dssp TTSCBCCCEEEEECTT---TCTTCTTHHHHHHHTTCSEEEEE-ECCSS---------SS----CCCCHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEeecCcc---cccchHHHHHHHHhcCCCEEEEe-ccccc---------cc----CcchHHHHHHHHHHHHH
Confidence 4577777777765311 22223445788999999999762 22110 00 01246889999999999
Q ss_pred CCCEEEEEE
Q 014892 105 HKVRAMADI 113 (416)
Q Consensus 105 ~Gi~VilD~ 113 (416)
+||+||+|+
T Consensus 77 ~Gi~vildl 85 (302)
T d1bqca_ 77 NRLICMLEV 85 (302)
T ss_dssp TTCEEEEEE
T ss_pred CCCEEEEEe
Confidence 999999999
|
| >d1m53a1 b.71.1.1 (A:521-598) Isomaltulose synthase PalI {Klebsiella sp., lx3 [TaxId: 576]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Glycosyl hydrolase domain superfamily: Glycosyl hydrolase domain family: alpha-Amylases, C-terminal beta-sheet domain domain: Isomaltulose synthase PalI species: Klebsiella sp., lx3 [TaxId: 576]
Probab=94.56 E-value=0.036 Score=38.83 Aligned_cols=29 Identities=10% Similarity=0.169 Sum_probs=22.9
Q ss_pred CCeEEEEec-CCEEEEEE---CCEEEEEEcCCC
Q 014892 366 SSIKILEAQ-SNLYSAII---GDKVCMKIGDGS 394 (416)
Q Consensus 366 G~~~~~~~~-~~~~~~~R---~~~~lvvinn~~ 394 (416)
|+++.+..+ ++++||.| +++++||+|.++
T Consensus 1 G~y~~l~~~~~~v~aY~R~~~~~~~lVv~NfS~ 33 (78)
T d1m53a1 1 GAYQDLNPQDNTVYAYTRTLGNERYLVVVNFKE 33 (78)
T ss_dssp SEEEESCTTCSSEEEEEEEETTEEEEEEEECSS
T ss_pred CceEEccCCCCcEEEEEEEcCCeEEEEEEeCCC
Confidence 678888665 47999999 567888888865
|
| >d1uoka1 b.71.1.1 (A:480-558) Oligo-1,6-glucosidase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Glycosyl hydrolase domain superfamily: Glycosyl hydrolase domain family: alpha-Amylases, C-terminal beta-sheet domain domain: Oligo-1,6-glucosidase species: Bacillus cereus [TaxId: 1396]
Probab=94.48 E-value=0.034 Score=39.04 Aligned_cols=30 Identities=7% Similarity=0.090 Sum_probs=23.5
Q ss_pred CCeEEEEec-CCEEEEEE---CCEEEEEEcCCCC
Q 014892 366 SSIKILEAQ-SNLYSAII---GDKVCMKIGDGSW 395 (416)
Q Consensus 366 G~~~~~~~~-~~~~~~~R---~~~~lvvinn~~~ 395 (416)
|+++.+..+ ++++||.| +++++||+|.+..
T Consensus 1 G~~~~l~~~~~~V~aY~R~~~~~~~lVv~NfS~~ 34 (79)
T d1uoka1 1 GSYDLILENNPSIFAYVRTYGVEKLLVIANFTAE 34 (79)
T ss_dssp CEEEEESTTCSSEEEEEEEETTEEEEEEEECSSS
T ss_pred CCeEEccCCCCcEEEEEEECCCcEEEEEEeCCCC
Confidence 778888765 47999998 6678888888653
|
| >d2pb1a1 c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exo-beta-(1,3)-glucanase species: Yeast (Candida albicans) [TaxId: 5476]
Probab=94.41 E-value=0.027 Score=52.55 Aligned_cols=53 Identities=21% Similarity=0.329 Sum_probs=38.0
Q ss_pred hhhHHHcCCCEEEeCCCC-CCCCCCCcccccCCCCCC-CCCCHHHHHHHHHHHHHCCCEEEEEE
Q 014892 52 VPDISKSGFTSVWLPPAT-HSFAPEGYLPQNLYSLNS-SYGSEHLLKALLHKMKQHKVRAMADI 113 (416)
Q Consensus 52 LdyLk~LGv~~I~L~Pi~-~~~~~~GY~~~d~~~id~-~~Gt~~d~~~Lv~~aH~~Gi~VilD~ 113 (416)
++.||++|+|+|=| ||. .... +.+ -++ .-+..+-|+++|+.|.++||+||+|+
T Consensus 74 ~~~i~~~G~N~VRi-Pv~~~~~~-----~~~---~~~~~~~~~~~ld~~i~~a~~~gl~VilDl 128 (394)
T d2pb1a1 74 FKQISNLGLNFVRI-PIGYWAFQ-----LLD---NDPYVQGQVQYLEKALGWARKNNIRVWIDL 128 (394)
T ss_dssp HHHHHHTTCCEEEE-EEEGGGTC-----CCT---TCCCCCCHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHCCCCEEEE-EecHHHhc-----CCC---CCccchhHHHHHHHHHHHHHHCCcEEEEEe
Confidence 88999999999998 542 1110 000 011 11457889999999999999999998
|
| >d1g01a_ c.1.8.3 (A:) Alkaline cellulase K catalytic domain {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Alkaline cellulase K catalytic domain species: Bacillus sp. [TaxId: 1409]
Probab=94.10 E-value=0.042 Score=50.27 Aligned_cols=76 Identities=17% Similarity=0.261 Sum_probs=50.2
Q ss_pred ccCceeEEEeeecCCCCCCcHHH--HHhhhhhHH-HcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCHHHHHHHHHH
Q 014892 25 RNGREILFQGFNWESCKHDWWRN--LERKVPDIS-KSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHK 101 (416)
Q Consensus 25 ~~~~~~~~q~f~~~~~~~G~~~g--i~~~LdyLk-~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~ 101 (416)
.+|..+++.+.-|.-.. ++.. -.+.++.|+ ++|+|+|=| |+.. +. .-|..+|.+ .+.+++.|+.
T Consensus 30 ~~G~~v~lrGv~~~~~~--w~~~~~~~~~~~~l~~~~G~N~VRl-p~~~-------~~-~~~~~~~~~--~~~ld~~V~~ 96 (357)
T d1g01a_ 30 EDGTPVQLRGMSTHGLQ--WFGEIVNENAFVALSNDWGSNMIRL-AMYI-------GE-NGYATNPEV--KDLVYEGIEL 96 (357)
T ss_dssp TTSCBCCCEEEEESCHH--HHGGGCSHHHHHHHHTTSCCSEEEE-EEES-------SS-SSTTTCTTH--HHHHHHHHHH
T ss_pred CCCCEEEEEEEecCcch--hcccccCHHHHHHHHHhcCCCEEEE-eeee-------cC-CCCccCHHH--HHHHHHHHHH
Confidence 46788888887753100 1110 124566776 589999988 4422 21 124555543 6789999999
Q ss_pred HHHCCCEEEEEE
Q 014892 102 MKQHKVRAMADI 113 (416)
Q Consensus 102 aH~~Gi~VilD~ 113 (416)
|.++||+||||+
T Consensus 97 a~~~GiyVIlD~ 108 (357)
T d1g01a_ 97 AFEHDMYVIVDW 108 (357)
T ss_dssp HHHTTCEEEEEE
T ss_pred HHHCCCEEEEee
Confidence 999999999998
|
| >d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: A4 beta-galactosidase species: Thermus thermophilus [TaxId: 274]
Probab=94.00 E-value=0.039 Score=49.63 Aligned_cols=111 Identities=9% Similarity=0.026 Sum_probs=64.1
Q ss_pred HHHHhhhhhHHHcCCCEEEeCCC-C----CCCCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccccCcC
Q 014892 46 RNLERKVPDISKSGFTSVWLPPA-T----HSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVG 120 (416)
Q Consensus 46 ~gi~~~LdyLk~LGv~~I~L~Pi-~----~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~ 120 (416)
+-..+-|+-+|+||+|+|=+.-+ + +.++ -| | .+.+.++|++|+++||+||+.+... ..
T Consensus 14 ~~~~~D~~~~~~~G~n~vR~~i~~W~~iep~~G--~~---~----------~~~~d~~i~~~~~~Gi~~iv~l~~~--~~ 76 (393)
T d1kwga2 14 ERWKEDARRMREAGLSHVRIGEFAWALLEPEPG--RL---E----------WGWLDEAIATLAAEGLKVVLGTPTA--TP 76 (393)
T ss_dssp HHHHHHHHHHHHHTCCEEEECTTCHHHHCSBTT--BC---C----------CHHHHHHHHHHHTTTCEEEEECSTT--SC
T ss_pred HHHHHHHHHHHHcCCCEEEecccchhhcCCCCC--cc---C----------HHHHHHHHHHHHHCCCEEEEEcCCC--CC
Confidence 34567799999999999987642 1 1111 11 1 3688999999999999999877422 11
Q ss_pred CCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCC
Q 014892 121 TTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGF 190 (416)
Q Consensus 121 ~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gv 190 (416)
| . ++.+....+.... .++. ...+...+..++.+|.+++.+...+...+..++-
T Consensus 77 --P----~--w~~~~~~~~~~~~----~~g~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (393)
T d1kwga2 77 --P----K--WLVDRYPEILPVD----REGR-----RRRFGGRRHYCFSSPVYREEARRIVTLLAERYGG 129 (393)
T ss_dssp --C----H--HHHHHCGGGSCBC----TTSC-----BCCSSSSCCCCTTCHHHHHHHHHHHHHHHHHHTT
T ss_pred --c----h--hhhccCccccccc----CCCc-----ccccccccccCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 1 0 1100000111000 0000 0112233446778899999999888777655543
|
| >d1vjza_ c.1.8.3 (A:) Endoglucanase homologue TM1752 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase homologue TM1752 species: Thermotoga maritima [TaxId: 2336]
Probab=93.90 E-value=0.048 Score=48.75 Aligned_cols=59 Identities=8% Similarity=0.098 Sum_probs=39.1
Q ss_pred HhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Q 014892 49 ERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADI 113 (416)
Q Consensus 49 ~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~ 113 (416)
.+-++.||++|+|+|=|+=-+..-... .+.+.+++ ...+-++++|++|.++||+||+|+
T Consensus 23 e~d~~~l~~~G~n~vRlpv~~~~~~~~----~~~~~~~~--~~l~~ld~~v~~~~~~gi~vildl 81 (325)
T d1vjza_ 23 EEDFLWMAQWDFNFVRIPMCHLLWSDR----GNPFIIRE--DFFEKIDRVIFWGEKYGIHICISL 81 (325)
T ss_dssp HHHHHHHHHTTCCEEEEEEEGGGTSCS----SCTTCCCG--GGHHHHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEecccHHHccCC----CCCCccCH--HHHHHHHHHHHHHHHcCCcEEEee
Confidence 445778999999999874111110000 01122222 237889999999999999999998
|
| >d1edta_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Streptomyces plicatus, endoglycosidase H [TaxId: 1922]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Type II chitinase domain: Endo-beta-N-acetylglucosaminidase species: Streptomyces plicatus, endoglycosidase H [TaxId: 1922]
Probab=93.57 E-value=0.094 Score=45.95 Aligned_cols=83 Identities=11% Similarity=0.120 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHHHCCCEEEEEEccccCcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCH
Q 014892 92 EHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQH 171 (416)
Q Consensus 92 ~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~ 171 (416)
..++...|+.||++||||+|=+==+|.+. +.. +..++
T Consensus 64 ~~~~~~~i~~l~~~g~KvllsiGG~~~~~-----------------------------------------~f~--~~~s~ 100 (265)
T d1edta_ 64 LDNAVTQIRPLQQQGIKVLLSVLGNHQGA-----------------------------------------GFA--NFPSQ 100 (265)
T ss_dssp HHTHHHHTHHHHHTTCEEEEEEEECTTSC-----------------------------------------CTT--CCSSH
T ss_pred hhhHHHHHHHHHhCCCEEEEEEccCcCCC-----------------------------------------Cce--ecCCH
Confidence 34677889999999999999662221111 011 12357
Q ss_pred HHHHHHHHHHHHHHHhcCCCeEEecccCC------Cc-------HHHHHHHHHhcCCce
Q 014892 172 FVRKDIIAWLRWLRNTVGFQDFRFDFARG------YS-------AKYVKEYIEGARPIF 217 (416)
Q Consensus 172 ~v~~~l~~~~~~w~~~~gvDGfRlD~a~~------~~-------~~~~~~~~~~~~~~~ 217 (416)
+-|+.+++.+..+++.+|+||+-+|--.. .+ ..+++++++++...+
T Consensus 101 ~~~~~Fa~~~~~~~~~~~~DGiDiD~Eyp~~~~~~~~~~d~~~~~~ll~~lR~~l~~~~ 159 (265)
T d1edta_ 101 QAASAFAKQLSDAVAKYGLDGVDFDDEYAEYGNNGTAQPNDSSFVHLVTALRANMPDKI 159 (265)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEECSSCCTTGGGCCCCCSSHHHHHHHHHHHHCTTSE
T ss_pred HHHHHHHHHHHHHHHhcCCCceEeccccCcccCCCCCcccHHHHHHHHHHHHHhhhhcE
Confidence 88888999888888999999999995421 11 457788887775433
|
| >d1egza_ c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 556]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase Cel5a species: Erwinia chrysanthemi [TaxId: 556]
Probab=93.55 E-value=0.016 Score=51.68 Aligned_cols=79 Identities=11% Similarity=0.096 Sum_probs=48.6
Q ss_pred cCceeEEEeeec--CCCCCCcHHH-HHhhhhhHH-HcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCHHHHHHHHHH
Q 014892 26 NGREILFQGFNW--ESCKHDWWRN-LERKVPDIS-KSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHK 101 (416)
Q Consensus 26 ~~~~~~~q~f~~--~~~~~G~~~g-i~~~LdyLk-~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~ 101 (416)
+|.++.++++-+ .-...|.-+. ..+.++.|+ ++|+|+|=+ |+.... ..||. .+|. +..+.++++|+.
T Consensus 15 nG~~v~l~G~n~~~~~~~~~~~~~~~~~~~~~l~~~~G~N~vR~-~~~~~~-~~~~~------~~~~-~~~~~ld~vv~~ 85 (291)
T d1egza_ 15 GEKAKSFAGNSLFWSNNGWGGEKFYTADTVASLKKDWKSSIVRA-AMGVQE-SGGYL------QDPA-GNKAKVERVVDA 85 (291)
T ss_dssp TTEECCCEEEEEEECCTTSSGGGGCSHHHHHHHHHTTCCCEEEE-EEECSS-TTSTT------TCHH-HHHHHHHHHHHH
T ss_pred CCcEEEEEEEecCCcCCCcCCccccCHHHHHHHHHhcCCCEEEE-eccccc-cCCcc------cCcH-HHHHHHHHHHHH
Confidence 677778888753 2222221111 134455566 799999987 443321 11222 2221 236778999999
Q ss_pred HHHCCCEEEEEE
Q 014892 102 MKQHKVRAMADI 113 (416)
Q Consensus 102 aH~~Gi~VilD~ 113 (416)
|.++||.||+|+
T Consensus 86 a~~~Giyvild~ 97 (291)
T d1egza_ 86 AIANDMYAIIGW 97 (291)
T ss_dssp HHHTTCEEEEEE
T ss_pred HHHCCCeEeeee
Confidence 999999999997
|
| >d1h1na_ c.1.8.3 (A:) Endocellulase EngI {Thermoascus aurantiacus [TaxId: 5087]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endocellulase EngI species: Thermoascus aurantiacus [TaxId: 5087]
Probab=92.17 E-value=0.078 Score=47.38 Aligned_cols=56 Identities=14% Similarity=0.070 Sum_probs=39.2
Q ss_pred HhhhhhHHHcCCCEEEeCCCCC-C--CCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Q 014892 49 ERKVPDISKSGFTSVWLPPATH-S--FAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADI 113 (416)
Q Consensus 49 ~~~LdyLk~LGv~~I~L~Pi~~-~--~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~ 113 (416)
.+.+++||++|+|+|=|+ |.- . +...++ .+++ ...+.++++|+.|.++||+||+|+
T Consensus 34 ~~di~~l~~~G~N~VRlP-v~~~~~~~~~~~~------~~~~--~~~~~l~~~v~~a~~~gl~vIlD~ 92 (305)
T d1h1na_ 34 PNTIDTLISKGMNIFRVP-FMMERLVPNSMTG------SPDP--NYLADLIATVNAITQKGAYAVVDP 92 (305)
T ss_dssp HHHHHHHHHTTCCEEEEE-ECHHHHSCSSTTS------CCCH--HHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHCCCCEEEee-eeHHHhccCCCCC------ccCH--HHHHHHHHHHHHHHhcCCeEEEec
Confidence 466889999999999873 321 0 011111 1221 226789999999999999999997
|
| >d2fhfa5 c.1.8.1 (A:403-965) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Pullulanase PulA species: Klebsiella pneumoniae [TaxId: 573]
Probab=91.93 E-value=0.0012 Score=64.74 Aligned_cols=50 Identities=2% Similarity=-0.031 Sum_probs=45.9
Q ss_pred cccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccccCcCCCCCCC
Q 014892 77 YLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHG 126 (416)
Q Consensus 77 Y~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~ 126 (416)
|++.++..+.+.+|+.+++++++.++|.+||+|++|+|.||++..|+|..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 138 (563)
T d2fhfa5 89 KVADIQQPFSRLCEVNSAVKSSEFAGYCDSGSTVEEVLTQLKQNDSKDNP 138 (563)
T ss_dssp GCCCTTSBHHHHHHHCHHHHTSTTGGGTTSSCBHHHHHHHHSTTCBTTBC
T ss_pred cccccccccccccccccccchhhhhhhccccchhhhhhhcccccccchhh
Confidence 66777888889999999999999999999999999999999999998764
|
| >d1tvna1 c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalteromonas haloplanktis [TaxId: 228]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase Cel5a species: Pseudoalteromonas haloplanktis [TaxId: 228]
Probab=91.78 E-value=0.091 Score=46.51 Aligned_cols=80 Identities=11% Similarity=0.061 Sum_probs=45.8
Q ss_pred ccCceeEEEeeecCCC--CCC--cHHHHHhhhhhHH-HcCCCEEEeCCCCCCC-CCCCcccccCCCCCCCCCCHHHHHHH
Q 014892 25 RNGREILFQGFNWESC--KHD--WWRNLERKVPDIS-KSGFTSVWLPPATHSF-APEGYLPQNLYSLNSSYGSEHLLKAL 98 (416)
Q Consensus 25 ~~~~~~~~q~f~~~~~--~~G--~~~gi~~~LdyLk-~LGv~~I~L~Pi~~~~-~~~GY~~~d~~~id~~~Gt~~d~~~L 98 (416)
.+|..+.+++..+--. ..| .+- -.+.+..|+ ++|+|+|=|. +...+ ....|... +. +..+.++++
T Consensus 14 ~nG~~v~l~Gvn~~~~~~~~~~~~~~-~~~~~~~l~~~~g~N~VR~~-~~~~~~~~~~~~~~------~~-~~l~~ld~~ 84 (293)
T d1tvna1 14 AGGENTSFAGPSLFWSNTGWGAEKFY-TAETVAKAKTEFNATLIRAA-IGHGTSTGGSLNFD------WE-GNMSRLDTV 84 (293)
T ss_dssp ETTEECCCEEEEECCCCTTSSCGGGC-SHHHHHHHHHHHCCSEEEEE-EECCTTSTTSTTTC------HH-HHHHHHHHH
T ss_pred eCCcEEEEEEeecCCcCCCcCCCccc-CHHHHHHHHHhCCCcEEEEe-cccccccccccccC------cH-HHHHHHHHH
Confidence 5677778888764211 111 111 112333454 7999999983 22111 11111111 11 135778999
Q ss_pred HHHHHHCCCEEEEEE
Q 014892 99 LHKMKQHKVRAMADI 113 (416)
Q Consensus 99 v~~aH~~Gi~VilD~ 113 (416)
|+.|+++||+||||+
T Consensus 85 v~~a~~~gi~vild~ 99 (293)
T d1tvna1 85 VNAAIAEDMYVIIDF 99 (293)
T ss_dssp HHHHHHTTCEEEEEE
T ss_pred HHHHHHcCCEEEecC
Confidence 999999999999997
|
| >d2ebna_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F1 [TaxId: 238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Type II chitinase domain: Endo-beta-N-acetylglucosaminidase species: Flavobacterium meningosepticum, endoglycosidase F1 [TaxId: 238]
Probab=90.56 E-value=0.32 Score=42.80 Aligned_cols=80 Identities=16% Similarity=0.136 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHHCCCEEEEEEccccCcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCH
Q 014892 92 EHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQH 171 (416)
Q Consensus 92 ~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~ 171 (416)
..++.++|+.||++||||+|=+==+|.+. ++..+ ++
T Consensus 66 ~~~~~~~i~~~q~~g~KvllsigG~~~~~-----------------------------------------~~~~~---~~ 101 (285)
T d2ebna_ 66 LTNRAKYLKPLQDKGIKVILSILGNHDRS-----------------------------------------GIANL---ST 101 (285)
T ss_dssp HHTHHHHTHHHHHTTCEEEEEEECCSSSC-----------------------------------------CTTCB---CH
T ss_pred hhhHHHHHHHHHhCCCEEEEEeccCCCCc-----------------------------------------ccccC---CH
Confidence 45688999999999999999662221111 00111 56
Q ss_pred HHHHHHHHHHHHHHHhcCCCeEEecccC------------CCc----HHHHHHHHHhcCC
Q 014892 172 FVRKDIIAWLRWLRNTVGFQDFRFDFAR------------GYS----AKYVKEYIEGARP 215 (416)
Q Consensus 172 ~v~~~l~~~~~~w~~~~gvDGfRlD~a~------------~~~----~~~~~~~~~~~~~ 215 (416)
+-|+.+++.+.-.++++|.||+-+|-=. ... ..+++++++++..
T Consensus 102 ~~~~~F~~~~~~~~~~y~lDGiDiD~Ey~~~~~~~~~~~~~~~~~~~~~li~eLr~~~~~ 161 (285)
T d2ebna_ 102 ARAKAFAQELKNTCDLYNLDGVFFDDEYSAYQTPPPSGFVTPSNNAAARLAYETKQAMPN 161 (285)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEECCSCCCCSSCCTTBCCCCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHHHHcCCcEEeccccCccccCCCccccCcchHHHHHHHHHHHHHHCCC
Confidence 7788888888888889999999999521 111 2467777777654
|
| >d1qbaa3 c.1.8.6 (A:338-780) Bacterial chitobiase (beta-N-acetylhexosaminidase) {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-N-acetylhexosaminidase catalytic domain domain: Bacterial chitobiase (beta-N-acetylhexosaminidase) species: Serratia marcescens [TaxId: 615]
Probab=90.45 E-value=0.4 Score=44.93 Aligned_cols=76 Identities=11% Similarity=0.104 Sum_probs=51.3
Q ss_pred cHHHHHhhhhhHHHcCCCEEEeC-----------CCCCC----CCCCCcccccCCCCCCCCC----------CHHHHHHH
Q 014892 44 WWRNLERKVPDISKSGFTSVWLP-----------PATHS----FAPEGYLPQNLYSLNSSYG----------SEHLLKAL 98 (416)
Q Consensus 44 ~~~gi~~~LdyLk~LGv~~I~L~-----------Pi~~~----~~~~GY~~~d~~~id~~~G----------t~~d~~~L 98 (416)
..+.|.+.||.++..++|.++|- |-++. .++++..........|.+| |.+|+++|
T Consensus 16 ~~~~ik~~id~ma~~KlN~lH~HltD~qg~rle~~~~P~Lt~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~YT~~ei~ei 95 (443)
T d1qbaa3 16 KKDAVLRLLDQMAAYKLNKFHFHLSDDEGWRIEIPGLPELTEVGGQRCHDLSETTCLLPQYGQGPDVYGGFFSRQDYIDI 95 (443)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECBCSSCBCBCCTTCTHHHHTTTEECSCTTCSSSBCCCTTSCSSCEECCBCHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCcEEEEEEecCCCceeeeCCcchhhhhcccccccccccccccccccCCCCCCCCccCHHHHHHH
Confidence 47889999999999999988771 21211 1222333333333333332 68999999
Q ss_pred HHHHHHCCCEEEEEE-ccccCc
Q 014892 99 LHKMKQHKVRAMADI-VINHRV 119 (416)
Q Consensus 99 v~~aH~~Gi~VilD~-V~NH~~ 119 (416)
|+-|.+|||+||-.+ +|.|+.
T Consensus 96 v~yA~~rgI~vIPEID~PGH~~ 117 (443)
T d1qbaa3 96 IKYAQARQIEVIPEIDMPAHAR 117 (443)
T ss_dssp HHHHHHTTCEEEEEEEESSSCH
T ss_pred HHHHHHcCCEEeeccchHHHHH
Confidence 999999999999666 356664
|
| >d1h3ga2 b.71.1.1 (A:518-600) Cyclomaltodextrinase {Flavobacterium sp. 92 [TaxId: 197856]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Glycosyl hydrolase domain superfamily: Glycosyl hydrolase domain family: alpha-Amylases, C-terminal beta-sheet domain domain: Cyclomaltodextrinase species: Flavobacterium sp. 92 [TaxId: 197856]
Probab=90.01 E-value=0.14 Score=36.27 Aligned_cols=42 Identities=7% Similarity=0.071 Sum_probs=29.0
Q ss_pred EecCCEEEEEE---CCEEEEEEcCCCCC------------CCCCCcEEeeeCCceEE
Q 014892 372 EAQSNLYSAII---GDKVCMKIGDGSWC------------PAGKEWTLATSGHKYAV 413 (416)
Q Consensus 372 ~~~~~~~~~~R---~~~~lvvinn~~~~------------~~~~~~~~~ls~~~~~~ 413 (416)
...+++|+|.| ++.++|++|+++.. +.....++++||+.+.+
T Consensus 6 ~P~~gvYvyfR~~~~~~VmVi~N~n~~~~~ldl~Rf~E~l~~~~~~~dVlsgk~i~l 62 (83)
T d1h3ga2 6 GPEENTWVYFRYNKDKRIMVAMNNNDKPMTLPTARFQEMLKGAPSGVDFLSGKTVGL 62 (83)
T ss_dssp CCBTTEEEEEEECSSEEEEEEEECSSSCEEEEGGGGHHHHTTCCEEEETTTCCEEEC
T ss_pred ccCCCEEEEEEEeCCCEEEEEECCCCccEEECHHHHHHHhcCCCeEEECCCCCEEEC
Confidence 34678999998 55677778886533 12345788888887754
|
| >d1iv8a2 c.1.8.1 (A:1-653) Maltooligosyl trehalose synthase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltooligosyl trehalose synthase species: Archaeon Sulfolobus acidocaldarius [TaxId: 2285]
Probab=89.79 E-value=0.11 Score=51.46 Aligned_cols=26 Identities=8% Similarity=-0.042 Sum_probs=21.6
Q ss_pred CCCCcHHHHHhhhhhHHHcCCCEEEe
Q 014892 40 CKHDWWRNLERKVPDISKSGFTSVWL 65 (416)
Q Consensus 40 ~~~G~~~gi~~~LdyLk~LGv~~I~L 65 (416)
+.=|+.+++.+.++.+++.|+..|.=
T Consensus 60 p~lGt~edf~~LV~aaH~~Gm~VIlD 85 (653)
T d1iv8a2 60 DELGGEKEYRRLIETAHTIGLGIIQD 85 (653)
T ss_dssp TTTTHHHHHHHHHHHHHHTTCEEEEE
T ss_pred hhcCCHHHHHHHHHHHHHCCCEEEEE
Confidence 34499999999999999999987753
|
| >d1jaka1 c.1.8.6 (A:151-506) beta-N-acetylhexosaminidase {Streptomyces plicatus [TaxId: 1922]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-N-acetylhexosaminidase catalytic domain domain: beta-N-acetylhexosaminidase species: Streptomyces plicatus [TaxId: 1922]
Probab=89.17 E-value=0.98 Score=40.82 Aligned_cols=126 Identities=8% Similarity=0.018 Sum_probs=70.2
Q ss_pred cHHHHHhhhhhHHHcCCCEEEeCCC------CCCCCC-----CCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEE
Q 014892 44 WWRNLERKVPDISKSGFTSVWLPPA------THSFAP-----EGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMAD 112 (416)
Q Consensus 44 ~~~gi~~~LdyLk~LGv~~I~L~Pi------~~~~~~-----~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD 112 (416)
..+-|.+.+|.++...+|.++|-=. ++..++ .|-...+-... ..+=|.+|+++||+-|.+|||+||-.
T Consensus 16 ~~~~i~~~id~ma~~K~N~lh~Hl~D~~~~r~e~~~~p~l~~~ga~~~~~~~~-~~~yT~~di~~iv~ya~~rgI~viPE 94 (356)
T d1jaka1 16 GVDEVKRYIDRVARYKYNKLHLHLSDDQGWRIAIDSWPRLATYGGSTEVGGGP-GGYYTKAEYKEIVRYAASRHLEVVPE 94 (356)
T ss_dssp CHHHHHHHHHHHHTTTCCEEEEECBCSSCBCBCCTTSTHHHHTTTSCCTTSSC-CCCBCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHHHHHHHHHcCCeEEEEEEecCCCcceeecCCchhhhccCccccCCCC-CCccCHHHHHHHHHHHHHcCCeEeec
Confidence 4778888899999999997776211 111110 11000000011 12336999999999999999999987
Q ss_pred E-ccccCcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhc
Q 014892 113 I-VINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTV 188 (416)
Q Consensus 113 ~-V~NH~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~ 188 (416)
+ ++.|+..-.. .|.... ... .+.. ...+.-.....||..+|++.+++.+++.-.++-+
T Consensus 95 id~PgH~~~~~~----~~pel~-------~~~----~~~~---~~~~~~~~~~~l~~~~~~t~~f~~~v~~E~~~lf 153 (356)
T d1jaka1 95 IDMPGHTNAALA----SYAELN-------CDG----VAPP---LYTGTKVGFSSLCVDKDVTYDFVDDVIGELAALT 153 (356)
T ss_dssp CCCSSSCHHHHH----HCGGGS-------TTS----CCCC---CCCSCCCSCCCCCTTCHHHHHHHHHHHHHHHHTC
T ss_pred CCCcchhHHHHH----hCcccc-------ccC----CCCc---cccccCCCCcccccCchHHHHHHHHHHHHHHHhc
Confidence 7 3455543100 000000 000 0000 0001112233588899999999999999887544
|
| >d1yhta1 c.1.8.6 (A:16-359) Dispersin B, DspB {Actinobacillus actinomycetemcomitans [TaxId: 714]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-N-acetylhexosaminidase catalytic domain domain: Dispersin B, DspB species: Actinobacillus actinomycetemcomitans [TaxId: 714]
Probab=89.09 E-value=0.43 Score=43.09 Aligned_cols=125 Identities=14% Similarity=-0.032 Sum_probs=68.7
Q ss_pred cHHHHHhhhhhHHHcCCCEEEeC-----------CCCCCCCC----CCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCE
Q 014892 44 WWRNLERKVPDISKSGFTSVWLP-----------PATHSFAP----EGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVR 108 (416)
Q Consensus 44 ~~~gi~~~LdyLk~LGv~~I~L~-----------Pi~~~~~~----~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~ 108 (416)
..+-|.+.|+.++.+++|.++|- |.++.-.. .+..+..--.....+=|.+|+++||+-|.++||+
T Consensus 16 ~~~~ik~~id~ma~~K~N~lhlHltDdq~~~le~~~~p~l~~~~~~~~~~~~~~~~~~~~~yt~~e~~~lv~yA~~rgI~ 95 (344)
T d1yhta1 16 SPEVIKSFIDTISLSGGNFLHLHFSDHENYAIESHLLNQRAENAVQGKDGIYINPYTGKPFLSYRQLDDIKAYAKAKGIE 95 (344)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECBSSSCBCBCBTTTTBCGGGSEECTTSCEECTTTCCEEBCHHHHHHHHHHHHHTTCE
T ss_pred CHHHHHHHHHHHHHcCCcEEEEEeecCCCceecccCCchhhhhccccCCCCCCCCCCCCcccCHHHHHHHHHHHHHcCCE
Confidence 47888999999999999999882 22221110 1110000000011112799999999999999999
Q ss_pred EEEEE-ccccCcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHh
Q 014892 109 AMADI-VINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNT 187 (416)
Q Consensus 109 VilD~-V~NH~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~ 187 (416)
||-.+ ++-|+..--.+ + +.. .. ..+..+. +....-..||..+|++.+++.+.++-.++-
T Consensus 96 viPeiD~PGH~~~~~~~----~-p~~------~~---~~~~~~~------~~~~~~~~l~~~~~~t~~~~~~l~~e~~~~ 155 (344)
T d1yhta1 96 LIPELDSPNHMTAIFKL----V-QKD------RG---VKYLQGL------KSRQVDDEIDITNADSITFMQSLMSEVIDI 155 (344)
T ss_dssp EEEEEEESSSCHHHHHH----H-HHH------HC---HHHHHHH------BCSSCTTSBCTTCHHHHHHHHHHHHHHHHH
T ss_pred EEeccchhhHHHHHHHh----c-hhh------cC---CCCccCC------CCCCCCCcccCCCchhHHHHHHHHHHHHHh
Confidence 99554 35565431000 0 000 00 0000000 000111248889999999999988877754
Q ss_pred c
Q 014892 188 V 188 (416)
Q Consensus 188 ~ 188 (416)
|
T Consensus 156 F 156 (344)
T d1yhta1 156 F 156 (344)
T ss_dssp H
T ss_pred c
Confidence 4
|
| >d1m7xa2 b.71.1.1 (A:623-728) 1,4-alpha-glucan branching enzyme {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Glycosyl hydrolase domain superfamily: Glycosyl hydrolase domain family: alpha-Amylases, C-terminal beta-sheet domain domain: 1,4-alpha-glucan branching enzyme species: Escherichia coli [TaxId: 562]
Probab=89.02 E-value=0.34 Score=35.84 Aligned_cols=42 Identities=7% Similarity=0.105 Sum_probs=29.3
Q ss_pred eEEEEe---cCCEEEEEE----CCEEEEEEcCCCC--------CCCCCCcEEeeeCC
Q 014892 368 IKILEA---QSNLYSAII----GDKVCMKIGDGSW--------CPAGKEWTLATSGH 409 (416)
Q Consensus 368 ~~~~~~---~~~~~~~~R----~~~~lvvinn~~~--------~~~~~~~~~~ls~~ 409 (416)
++.+.. ++.+++|.| ++.+++|+|.+.. .|..|.|+.+|+..
T Consensus 4 F~Wi~~~d~~~sV~af~R~~~~~~~~vvV~Nfsp~~~~~Y~igvp~~G~~~~ilNTD 60 (106)
T d1m7xa2 4 FEWLVVDDKERSVLIFVRRDKEGNEIIVASNFTPVPRHDYRFGINQPGKWREILNTD 60 (106)
T ss_dssp EEEEEEEETTTTEEEEEEECTTCCEEEEEEECSSCCEEEECCBCSSCSEEEEEEETT
T ss_pred CEEeeCCCCCCCEEEEEEeCCCCCEEEEEEeCCCCccCcEEcCCCCCCeEEEEEcCC
Confidence 445533 357999988 3568888888653 25678899988754
|
| >d1nowa1 c.1.8.6 (A:200-552) beta-hexosaminidase B {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-N-acetylhexosaminidase catalytic domain domain: beta-hexosaminidase B species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.89 E-value=0.28 Score=44.66 Aligned_cols=122 Identities=10% Similarity=0.184 Sum_probs=69.0
Q ss_pred cHHHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccC--------CCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE-c
Q 014892 44 WWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNL--------YSLNSSYGSEHLLKALLHKMKQHKVRAMADI-V 114 (416)
Q Consensus 44 ~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~--------~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~-V 114 (416)
..+-|.+.++.++.+++|.++|-= .+. ..+.+....| +..+..| |.+|+++||+-|+++||+||-.+ +
T Consensus 16 ~~~~lk~~id~ma~~K~N~lhlHl-~D~-~~~~~e~~~~P~l~~~g~~~~~~~y-T~~d~~~lv~yA~~rgI~iiPEid~ 92 (353)
T d1nowa1 16 PVKIILKTLDAMAFNKFNVLHWHI-VDD-QSFPYQSITFPELSNKGSYSLSHVY-TPNDVRMVIEYARLRGIRVLPEFDT 92 (353)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEC-CCS-SCCCBCCSSCHHHHHHHSSSTTSCB-CHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CHHHHHHHHHHHHHcCCcEEEEEE-ecC-CCceeccCCCcchhhcCCCCCCCCc-CHHHHHHHHHHHHHCCCEEEecccc
Confidence 367788888999999999888610 000 0111111110 1112222 89999999999999999999666 3
Q ss_pred cccCcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcC
Q 014892 115 INHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVG 189 (416)
Q Consensus 115 ~NH~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~g 189 (416)
+.|+..-.. ..+.-.....+. .+.......||..+|++.+++.+++.-.++-|.
T Consensus 93 PGH~~~~~~---------------~~pel~~~~~~~------~~~~~~~~~l~~~~~~t~~~~~~v~~e~~~~F~ 146 (353)
T d1nowa1 93 PGHTLSWGK---------------GQKDLLTPCYSR------QNKLDSFGPINPTLNTTYSFLTTFFKEISEVFP 146 (353)
T ss_dssp SSSCTTHHH---------------HSTTCEEECCC----------CCSEEEECTTCHHHHHHHHHHHHHHHHHCC
T ss_pred hhhHHHHHH---------------HhhhhcCCcccc------CCcCCCccccCCCchhhHHHHHHHHHHHHHhhc
Confidence 456544100 001100000000 000111123788899999999999888775544
|
| >d1eoka_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F3 [TaxId: 238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Type II chitinase domain: Endo-beta-N-acetylglucosaminidase species: Flavobacterium meningosepticum, endoglycosidase F3 [TaxId: 238]
Probab=88.57 E-value=0.36 Score=41.93 Aligned_cols=72 Identities=8% Similarity=0.006 Sum_probs=49.0
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccccCcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCC
Q 014892 84 SLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGV 163 (416)
Q Consensus 84 ~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (416)
.+...+-+.++|++-|++||++|+||++-+==.+.+. . ...
T Consensus 50 ~~~~~~~~~~~~~~~i~~~q~~g~kVllSiGG~~~~~----------~-------~~~---------------------- 90 (282)
T d1eoka_ 50 GMMGSFKSYKDLDTQIRSLQSRGIKVLQNIDDDVSWQ----------S-------SKP---------------------- 90 (282)
T ss_dssp GGGTTCSSHHHHHHHHHHHHTTTCEEEEEEECCGGGG----------S-------SSG----------------------
T ss_pred ceeecccchhHHHHHHHHHhhcCceEEEEEecCCCCC----------c-------cCC----------------------
Confidence 3445566789999999999999999999651110000 0 000
Q ss_pred CcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEeccc
Q 014892 164 PNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFA 198 (416)
Q Consensus 164 ~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a 198 (416)
. ......+++...+...+.++|+|||=||-=
T Consensus 91 ~----~~~~~~~~~~~~~~~~i~~yglDGiDiD~E 121 (282)
T d1eoka_ 91 G----GFASAAAYGDAIKSIVIDKWKLDGISLDIE 121 (282)
T ss_dssp G----GSSSHHHHHHHHHHHHTTTTCCCEEEEECC
T ss_pred c----cHHHHHHHHHHHHHHHHHHhCCCceeeccc
Confidence 0 012346778888888888999999999963
|
| >d1hx0a1 b.71.1.1 (A:404-496) Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Glycosyl hydrolase domain superfamily: Glycosyl hydrolase domain family: alpha-Amylases, C-terminal beta-sheet domain domain: Animal alpha-amylase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=88.43 E-value=0.15 Score=36.68 Aligned_cols=38 Identities=18% Similarity=0.287 Sum_probs=27.6
Q ss_pred EecCCEEEEEECCEEEEEEcCCCCC--------CCCCCcEEeeeCC
Q 014892 372 EAQSNLYSAIIGDKVCMKIGDGSWC--------PAGKEWTLATSGH 409 (416)
Q Consensus 372 ~~~~~~~~~~R~~~~lvvinn~~~~--------~~~~~~~~~ls~~ 409 (416)
...++.+||.|+++..|+|||.... .+.|++.++.||.
T Consensus 8 dng~nqIAF~RG~kGFvAiNn~~~~~~~t~~T~LPaG~YCDVisG~ 53 (93)
T d1hx0a1 8 DNGSNQVAFGRGNRGFIVFNNDDWQLSSTLQTGLPGGTYCDVISGD 53 (93)
T ss_dssp ECSSSEEEEEETTTEEEEEECSSSCEEEEEECCSCSEEEECTTTCC
T ss_pred eCCCcEEEEecCCCcEEEEeCCCcccceeEecCCCCcceeEeeecc
Confidence 3445799999999999999996522 2346677776653
|
| >d1g5aa1 b.71.1.1 (A:555-628) Amylosucrase {Neisseria polysaccharea [TaxId: 489]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Glycosyl hydrolase domain superfamily: Glycosyl hydrolase domain family: alpha-Amylases, C-terminal beta-sheet domain domain: Amylosucrase species: Neisseria polysaccharea [TaxId: 489]
Probab=88.03 E-value=0.19 Score=34.61 Aligned_cols=39 Identities=5% Similarity=-0.093 Sum_probs=28.4
Q ss_pred cCCEEEEEECCEEEEEEcCCCCCC---------CCCCcEEeeeCCceE
Q 014892 374 QSNLYSAIIGDKVCMKIGDGSWCP---------AGKEWTLATSGHKYA 412 (416)
Q Consensus 374 ~~~~~~~~R~~~~lvvinn~~~~~---------~~~~~~~~ls~~~~~ 412 (416)
++.+++|.|+++++|+.|.+.... .+..|+++++|..+.
T Consensus 9 N~~vlaf~R~~~ilvi~NfS~~~Q~v~l~~l~~~g~~~~DLlsg~~~~ 56 (74)
T d1g5aa1 9 NKHIIGYIRNNALLAFGNFSEYPQTVTAHTLQAMPFKAHDLIGGKTVS 56 (74)
T ss_dssp CTTEEEEEETTTEEEEEECSSSCEEECTTTTTTSCSEEEETTTCCEEE
T ss_pred CCeEEEEEeCCeEEEEEeCCCCCEEEEcchhhhcCCCcchhhCCcccC
Confidence 457999999888888888865331 234688888887654
|
| >d1jaea1 b.71.1.1 (A:379-471) Animal alpha-amylase {Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Glycosyl hydrolase domain superfamily: Glycosyl hydrolase domain family: alpha-Amylases, C-terminal beta-sheet domain domain: Animal alpha-amylase species: Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]
Probab=85.96 E-value=0.21 Score=35.89 Aligned_cols=38 Identities=13% Similarity=0.100 Sum_probs=27.5
Q ss_pred EecCCEEEEEECCEEEEEEcCCCCC-------CCCCCcEEeeeCC
Q 014892 372 EAQSNLYSAIIGDKVCMKIGDGSWC-------PAGKEWTLATSGH 409 (416)
Q Consensus 372 ~~~~~~~~~~R~~~~lvvinn~~~~-------~~~~~~~~~ls~~ 409 (416)
...++.+||.|+++..|+||++... .+.|++.++.||.
T Consensus 9 dng~nqIAF~RG~kGFvAiN~~~~l~~t~qTgLPaG~YCDVisG~ 53 (93)
T d1jaea1 9 SNDDNQIAFSRGSQGFVAFTNGGDLNQNLNTGLPAGTYCDVISGE 53 (93)
T ss_dssp ECSSSEEEEEETTTEEEEEESSSCEEEEEECCCCSEEEECTTTCC
T ss_pred ECCCcEEEEecCCCcEEEEeCCcccceeEecCCCCcceeEeeecc
Confidence 3446799999999999999985421 2346777777653
|
| >d1hl9a2 c.1.8.11 (A:7-356) Putative alpha-L-fucosidase, catalytic domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Putative alpha-L-fucosidase, catalytic domain domain: Putative alpha-L-fucosidase, catalytic domain species: Thermotoga maritima [TaxId: 2336]
Probab=85.58 E-value=2.1 Score=38.49 Aligned_cols=119 Identities=11% Similarity=-0.051 Sum_probs=71.8
Q ss_pred HHhhhhhHHHcCCCEEEeCCCCCCC-CCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccccCcCCCCCCC
Q 014892 48 LERKVPDISKSGFTSVWLPPATHSF-APEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHG 126 (416)
Q Consensus 48 i~~~LdyLk~LGv~~I~L~Pi~~~~-~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~ 126 (416)
..+-+.-+|+.|+..|-|+-=+... .-+.=..++|..++... ..+=+++|+++|+++||++-+ +-|...
T Consensus 101 a~~Wv~~ak~aGaky~vlTaKHHDGF~Lw~S~~t~~n~~~~~~-~rDiv~el~~A~rk~Glk~G~---YyS~~~------ 170 (350)
T d1hl9a2 101 PQEWADLFKKAGAKYVIPTTKHHDGFCLWGTKYTDFNSVKRGP-KRDLVGDLAKAVREAGLRFGV---YYSGGL------ 170 (350)
T ss_dssp HHHHHHHHHHTTCSEEEEEEECTTCCBSSCCSSCSCBTTTSTT-CSCHHHHHHHHHHHTTCEECE---EECCSC------
T ss_pred HHHHHHHHHHcCCCEEEEEEEecCCcccCCCCCCCCCCcCCCC-CCchHHHHHHHHHhcCCceeE---Eecccc------
Confidence 4455778899999999887543321 11111234555555444 356699999999999999987 211111
Q ss_pred CcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEeccc
Q 014892 127 GKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFA 198 (416)
Q Consensus 127 ~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a 198 (416)
+|+..... ... -......+...+...+++..-++-++..||.|++=+|..
T Consensus 171 -----------dw~~~~~~---~~~--------~~~~~~~~~~~~~y~~~~~~Ql~EL~~~Y~p~~~w~D~~ 220 (350)
T d1hl9a2 171 -----------DWRFTTEP---IRY--------PEDLSYIRPNTYEYADYAYKQVMELVDLYLPDVLWNDMG 220 (350)
T ss_dssp -----------CTTSCCSC---CCS--------GGGGGTCSCCSHHHHHHHHHHHHHHHHHHCCSCEEECSC
T ss_pred -----------ccccccCC---CCC--------cchhcccCccchHHHHHHHHHHHHHHhccCCceEEeccc
Confidence 11111000 000 000111233456788888888999999999999999975
|
| >d1g94a1 b.71.1.1 (A:355-448) Bacterial alpha-Amylase {Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Glycosyl hydrolase domain superfamily: Glycosyl hydrolase domain family: alpha-Amylases, C-terminal beta-sheet domain domain: Bacterial alpha-Amylase species: Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]
Probab=85.03 E-value=0.2 Score=36.02 Aligned_cols=37 Identities=19% Similarity=0.112 Sum_probs=27.5
Q ss_pred EecCCEEEEEECCEEEEEEcCCCCC--------CCCCCcEEeeeC
Q 014892 372 EAQSNLYSAIIGDKVCMKIGDGSWC--------PAGKEWTLATSG 408 (416)
Q Consensus 372 ~~~~~~~~~~R~~~~lvvinn~~~~--------~~~~~~~~~ls~ 408 (416)
...++.+||.|+++..|+||+.... .+.|++.++.||
T Consensus 9 dng~nqIAF~RG~kGFvAiN~~~~~~~~t~~TgLPaG~YCDVisG 53 (94)
T d1g94a1 9 DNTNNQISFGRGSSGHMAINKEDSTLTATVQTDMASGQYCNVLKG 53 (94)
T ss_dssp ECSSSEEEEECGGGEEEEEECSSSCBCCEEECCSCSEEEECTTTC
T ss_pred ECCCcEEEEecCCCcEEEEeCCCCceeEEEEccCCCceeeEEeec
Confidence 3446799999999999999996432 234677777765
|
| >d1vema2 c.1.8.1 (A:1-417) Bacterial beta-amylase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial beta-amylase species: Bacillus cereus [TaxId: 1396]
Probab=84.79 E-value=0.63 Score=42.72 Aligned_cols=65 Identities=11% Similarity=0.191 Sum_probs=50.3
Q ss_pred CcHHHHHhhhhhHHHcCCCEEEeCCCC----CCCCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccccC
Q 014892 43 DWWRNLERKVPDISKSGFTSVWLPPAT----HSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHR 118 (416)
Q Consensus 43 G~~~gi~~~LdyLk~LGv~~I~L~Pi~----~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~ 118 (416)
.+.+.+.+.|..||++||++|-+ +|+ |..+..-| ..+.+++|++-+++.||||.+=+.+.-+
T Consensus 26 ~~~~~~~~~L~~LK~aGV~gV~v-dVwWGivE~~~Pg~Y-------------dws~yd~l~~mv~~~GLKi~vvmsfH~c 91 (417)
T d1vema2 26 TNWETFENDLRWAKQNGFYAITV-DFWWGDMEKNGDQQF-------------DFSYAQRFAQSVKNAGMKMIPIISTHQC 91 (417)
T ss_dssp SCHHHHHHHHHHHHHTTEEEEEE-EEEHHHHTCSSTTCC-------------CCHHHHHHHHHHHHTTCEEEEEEECSCB
T ss_pred CCHHHHHHHHHHHHHcCCCEEEE-eeeeeeeecCCCCcc-------------CcHHHHHHHHHHHHcCCeEEEEEEeccc
Confidence 46899999999999999999977 665 22222223 3567999999999999998887777766
Q ss_pred cCC
Q 014892 119 VGT 121 (416)
Q Consensus 119 ~~~ 121 (416)
+.+
T Consensus 92 Ggn 94 (417)
T d1vema2 92 GGN 94 (417)
T ss_dssp SSS
T ss_pred CCC
Confidence 653
|
| >d1tg7a5 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-terminal domain {Penicillium sp. [TaxId: 5081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Glycosyl hydrolases family 35 catalytic domain domain: Beta-galactosidase LacA, N-terminal domain species: Penicillium sp. [TaxId: 5081]
Probab=84.72 E-value=0.2 Score=45.63 Aligned_cols=55 Identities=15% Similarity=0.069 Sum_probs=38.2
Q ss_pred HhhhhhHHHcCCCEEEeCCCCCC--CCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Q 014892 49 ERKVPDISKSGFTSVWLPPATHS--FAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADI 113 (416)
Q Consensus 49 ~~~LdyLk~LGv~~I~L~Pi~~~--~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~ 113 (416)
.+.|.-+|+||+|+|-+.=.+.. +....|+ |....++.++++.|+++||+||+..
T Consensus 39 ~~~l~~mk~~G~n~vr~~~~W~~~ep~~g~~d----------f~~~~~l~~~l~~a~~~Gl~vil~~ 95 (354)
T d1tg7a5 39 IDIFEKVKALGFNCVSFYVDWALLEGNPGHYS----------AEGIFDLQPFFDAAKEAGIYLLARP 95 (354)
T ss_dssp HHHHHHHHTTTCCEEEEECCHHHHCSBTTBCC----------CCGGGCSHHHHHHHHHHTCEEEEEC
T ss_pred HHHHHHHHHcCCCEEEEecchhccCCCCCccc----------ccchhhHHHHHHHHHHcCCEEEEcC
Confidence 46788899999999986321110 1112222 2346789999999999999999855
|
| >d1ua7a1 b.71.1.1 (A:348-425) Bacterial alpha-Amylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Glycosyl hydrolase domain superfamily: Glycosyl hydrolase domain family: alpha-Amylases, C-terminal beta-sheet domain domain: Bacterial alpha-Amylase species: Bacillus subtilis [TaxId: 1423]
Probab=84.27 E-value=0.36 Score=33.48 Aligned_cols=39 Identities=10% Similarity=0.164 Sum_probs=28.7
Q ss_pred CCEEEEEECCEEEEEEcCCCCC--------CCCCCcEEeeeCCceEE
Q 014892 375 SNLYSAIIGDKVCMKIGDGSWC--------PAGKEWTLATSGHKYAV 413 (416)
Q Consensus 375 ~~~~~~~R~~~~lvvinn~~~~--------~~~~~~~~~ls~~~~~~ 413 (416)
+.++.|.|+.+.+|++|+.... .+.|+++++.+|..+.|
T Consensus 12 nqi~~~~RG~kGfvaiN~~~~~~~~~~~T~Lp~GtYcDvisg~~~tV 58 (78)
T d1ua7a1 12 NQIFMNQRGSHGVVLANAGSSSVSINTATKLPDGRYDNKAGAGSFQV 58 (78)
T ss_dssp TTEEEEEETTTEEEEEECSSSCEEEEEECCSCSEEEECTTSSCEEEE
T ss_pred eEEEEEecCCcEEEEEeCCCCcEEeeEEccCCCcceeEEecCCEEEE
Confidence 4567779999999999985421 24578888888877665
|
| >d1r46a2 c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Melibiase species: Human (Homo sapiens) [TaxId: 9606]
Probab=83.69 E-value=5.5 Score=34.08 Aligned_cols=31 Identities=3% Similarity=0.111 Sum_probs=24.1
Q ss_pred CCCeeEEecCCcCCCchhHHHHH--HHHHHHHH
Q 014892 328 HPGIPSVFYDHFYDWGDSIHNQI--VKLMDVRR 358 (416)
Q Consensus 328 ~pGiP~Iy~G~E~gw~~~l~~~~--~~Li~lR~ 358 (416)
+-|-|++..++--..+.+.++.+ +.||+|.+
T Consensus 258 ~~~spL~i~~dl~~~~~~~l~ll~N~e~IAinq 290 (292)
T d1r46a2 258 IMAAPLFMSNDLRHISPQAKALLQDKDVIAINQ 290 (292)
T ss_dssp HTTCCEEECSCTTSCCHHHHHHHHCHHHHHHHT
T ss_pred HHhCchhccCCcccCCHHHHHHhcCHHHHhcCC
Confidence 45678887777766777888988 89999864
|
| >d2gjxa1 c.1.8.6 (A:167-528) beta-hexosaminidase A {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-N-acetylhexosaminidase catalytic domain domain: beta-hexosaminidase A species: Human (Homo sapiens) [TaxId: 9606]
Probab=83.60 E-value=1.4 Score=39.90 Aligned_cols=122 Identities=8% Similarity=0.072 Sum_probs=70.1
Q ss_pred cHHHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCccccc--------CCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE-c
Q 014892 44 WWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQN--------LYSLNSSYGSEHLLKALLHKMKQHKVRAMADI-V 114 (416)
Q Consensus 44 ~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d--------~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~-V 114 (416)
..+-|.+.||.++..++|.++|- +.+. ..+.+.... -+.....+=|.+|+++||+-|.++||+||-.+ +
T Consensus 16 ~~~~lk~~id~ma~~K~N~lhlH-ltD~-~~~r~e~~~~p~l~~~ga~~~~~~~yT~~d~~elv~yA~~rgI~vIPEiD~ 93 (362)
T d2gjxa1 16 PLSSILDTLDVMAYNKLNVFHWH-LVDD-PSFPYESFTFPELMRKGSYNPVTHIYTAQDVKEVIEYARLRGIRVLAEFDT 93 (362)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEE-CCCS-SCCCBCCSSCTHHHHHHSSCTTTSCBCHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred CHHHHHHHHHHHHHcCCcEEEEE-EEcC-CCceeccCCCchhhhcCCcCCCCCccCHHHHHHHHHHHHHcCCEEEecccc
Confidence 47888899999999999999871 0000 011121111 11112233389999999999999999999776 3
Q ss_pred cccCcCCCCCCCCcccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhc
Q 014892 115 INHRVGTTQGHGGKYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTV 188 (416)
Q Consensus 115 ~NH~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~ 188 (416)
|.|+..-... .+.-.+...+... . ......+|..+|++.+++.+++.-.++-|
T Consensus 94 PGH~~a~~~~---------------~p~l~~~~~~~~~--~----~~~~~~l~~~~~~t~~f~~~v~~E~~~lF 146 (362)
T d2gjxa1 94 PGHTLSWGPG---------------IPGLLTPCYSGSE--P----SGTFGPVNPSLNNTYEFMSTFFLEVSSVF 146 (362)
T ss_dssp SSSCTTTTTT---------------STTCEEEEESSSS--E----EEEEEEECTTCHHHHHHHHHHHHHHHHHC
T ss_pred cchhHHHHHh---------------ChhhcCcccCCCC--C----CCcccccCCCcHHHHHHHHHHHHHHHHhh
Confidence 4555441110 0000000000000 0 00012377888999999999888777544
|
| >d1gjwa2 c.1.8.1 (A:1-572) Maltosyltransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltosyltransferase species: Thermotoga maritima [TaxId: 2336]
Probab=83.48 E-value=0.027 Score=54.79 Aligned_cols=41 Identities=10% Similarity=-0.071 Sum_probs=36.6
Q ss_pred CCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccCCCc
Q 014892 161 HGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFARGYS 202 (416)
Q Consensus 161 ~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~~~~ 202 (416)
..++++|..+|+|++.+.+.+.+|+ +++|||||+|++..+.
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~vdgfr~d~~~~~~ 305 (572)
T d1gjwa2 265 KFTLPPNLIDPQKWEKIKREEGNIL-ELIVKEFGIITPPGFS 305 (572)
T ss_dssp TBCCCHHHHCHHHHHHHHTCSSCHH-HHHHHHHSEECCCBCC
T ss_pred ccCCCccccCHHHHHHHHHHhhhHH-hcccceeecccccccc
Confidence 4578899999999999999999998 8999999999997654
|
| >d1uasa2 c.1.8.1 (A:1-273) Melibiase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Melibiase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=83.42 E-value=5.6 Score=33.79 Aligned_cols=57 Identities=14% Similarity=0.173 Sum_probs=36.4
Q ss_pred cHHHHHhhhhhH-----HHcCCCEEEeCCCCCCCCCCCccc------ccCCCCC-CCCCCHHHHHHHHHHHHHCCCEEEE
Q 014892 44 WWRNLERKVPDI-----SKSGFTSVWLPPATHSFAPEGYLP------QNLYSLN-SSYGSEHLLKALLHKMKQHKVRAMA 111 (416)
Q Consensus 44 ~~~gi~~~LdyL-----k~LGv~~I~L~Pi~~~~~~~GY~~------~d~~~id-~~~Gt~~d~~~Lv~~aH~~Gi~Vil 111 (416)
+-+.|.+.++.+ +++|++.|.| +.|+.. .++ .++ .+|. ..+|.|++.+|++||++-+
T Consensus 24 ~e~~~~~~~~~~~~~gl~~~G~~~~~i--------DdGW~~~~~d~~g~~-~~~~~~fP--~Gl~~~~~~~~~~G~~~Gl 92 (273)
T d1uasa2 24 NEQIIRETADALVNTGLAKLGYQYVNI--------DDCWAEYSRDSQGNF-VPNRQTFP--SGIKALADYVHAKGLKLGI 92 (273)
T ss_dssp CHHHHHHHHHHHHHTSHHHHTCCEEEC--------CSSCBCSSCCTTSCC-CBCTTTCT--TCHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHHHHcCchhhCCeEEEE--------cCCcCCCCCCCCCCc-ccCccccC--CChHHHHHHHHhCCCeEEE
Confidence 456666666664 5689998876 223322 111 222 2332 3599999999999999987
|
| >d1qwga_ c.1.27.1 (A:) (2r)-phospho-3-sulfolactate synthase ComA {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (2r)-phospho-3-sulfolactate synthase ComA family: (2r)-phospho-3-sulfolactate synthase ComA domain: (2r)-phospho-3-sulfolactate synthase ComA species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=81.48 E-value=1.9 Score=36.79 Aligned_cols=106 Identities=10% Similarity=0.130 Sum_probs=69.4
Q ss_pred HHhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccccCcCCCCCCCC
Q 014892 48 LERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLHKMKQHKVRAMADIVINHRVGTTQGHGG 127 (416)
Q Consensus 48 i~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~ 127 (416)
+.+-+++.++|||++|+++=-+- .+ +.++..++|+.|.++|++|+-.+ +...+
T Consensus 87 ~~~y~~~~~~lGf~~iEiSdg~~-------------~i-----~~~~~~~~I~~~~~~G~~V~~Ev-----G~K~~---- 139 (251)
T d1qwga_ 87 FDEFLNECEKLGFEAVEISDGSS-------------DI-----SLEERNNAIKRAKDNGFMVLTEV-----GKKMP---- 139 (251)
T ss_dssp HHHHHHHHHHHTCCEEEECCSSS-------------CC-----CHHHHHHHHHHHHHTTCEEEEEE-----CCSSH----
T ss_pred HHHHHHHHHHcCCCEEEEcCCcc-------------CC-----CHHHHHHHHHHHHhCCCEEeecc-----cCCCC----
Confidence 44558899999999999874211 12 36789999999999999999766 11100
Q ss_pred cccccCCCCCCCCCCceecCCCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEecccC--------
Q 014892 128 KYNRYDGIPLSWDEHAVTSCTGGLGNGSTGDNFHGVPNIDHTQHFVRKDIIAWLRWLRNTVGFQDFRFDFAR-------- 199 (416)
Q Consensus 128 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~w~~~~gvDGfRlD~a~-------- 199 (416)
++. .+.-.+.+++.++..+ +.|++=.=+++-.
T Consensus 140 ------------~~~---------------------------~~~~~~~~i~~~~~~L-eaGA~~ViiEarEsg~~~Gi~ 179 (251)
T d1qwga_ 140 ------------DKD---------------------------KQLTIDDRIKLINFDL-DAGADYVIIEGRESGKGKGLF 179 (251)
T ss_dssp ------------HHH---------------------------TTCCHHHHHHHHHHHH-HHTCSEEEECCTTTCCSSTTB
T ss_pred ------------CCc---------------------------cccCHHHHHHHHHHHH-HCCCceeEeehhhcCCcccee
Confidence 000 0000346777777777 8999999888631
Q ss_pred ----CCcHHHHHHHHHhcCC-ceEEEc
Q 014892 200 ----GYSAKYVKEYIEGARP-IFSVGE 221 (416)
Q Consensus 200 ----~~~~~~~~~~~~~~~~-~~~vgE 221 (416)
.+-.+.+..+.+.+.. .+++ |
T Consensus 180 ~~~g~~r~~~i~~i~~~l~~~kiif-E 205 (251)
T d1qwga_ 180 DKEGKVKENELDVLAKNVDINKVIF-E 205 (251)
T ss_dssp CTTSCBCHHHHHHHHTTSCGGGEEE-E
T ss_pred cCCCChhHHHHHHHHHhCCcccEEE-E
Confidence 2335677778777643 3343 5
|
| >d1bhga3 c.1.8.3 (A:329-632) beta-Glucuronidase, domain 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: beta-Glucuronidase, domain 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.70 E-value=2 Score=36.94 Aligned_cols=65 Identities=14% Similarity=0.175 Sum_probs=46.2
Q ss_pred cCceeEEEeeecCC--CCC---CcHHHHHhhhhhHHHcCCCEEEeCCCCCCCCCCCcccccCCCCCCCCCCHHHHHHHHH
Q 014892 26 NGREILFQGFNWES--CKH---DWWRNLERKVPDISKSGFTSVWLPPATHSFAPEGYLPQNLYSLNSSYGSEHLLKALLH 100 (416)
Q Consensus 26 ~~~~~~~q~f~~~~--~~~---G~~~gi~~~LdyLk~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~Lv~ 100 (416)
+|..+.+.+..|-. +.. -+-+.+...|..+|++|+|+|=+. +|-.. +.+.+
T Consensus 11 NG~~~~lrG~~~~~~~~~~g~~~~~~~~~~d~~~~k~~G~N~iR~~---------~~~~~---------------~~~~~ 66 (304)
T d1bhga3 11 NGKPFYFHGVNKHEDADIRGKGFDWPLLVKDFNLLRWLGANAFRTS---------HYPYA---------------EEVMQ 66 (304)
T ss_dssp TTEECCEEEEECCSCBTTTBTCCCHHHHHHHHHHHHHHTCCEEECT---------TSCCS---------------STHHH
T ss_pred CCEEEEEEeEEcCCCCCccCCCCCHHHHHHHHHHHHHcCCCEEEec---------CCCCh---------------HHHHH
Confidence 67777777766521 111 267888999999999999999751 11110 14788
Q ss_pred HHHHCCCEEEEEEc
Q 014892 101 KMKQHKVRAMADIV 114 (416)
Q Consensus 101 ~aH~~Gi~VilD~V 114 (416)
.|.+.||.|+.|+-
T Consensus 67 ~cD~~Gilv~~e~~ 80 (304)
T d1bhga3 67 MCDRYGIVVIDECP 80 (304)
T ss_dssp HHSTTCCEEEECCS
T ss_pred HHHhcCCeeeeccc
Confidence 99999999999863
|