Citrus Sinensis ID: 014922

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410------
MLKMVVDSGLKDDLVLGDPNAPRFVLWNGRLRPVPSSPTDLPIFDLMSIGGKIRAGLGALGLRPPPPGHEESVEEFVRRNLGDEVFERLIEPFCSGVYAGDPSKLSMKAAFGKVWKLEQTGGSIIGGTFKAIQEKNKAPKQPRDPRLPKPKGQTVGSFRKGLTMLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYVASSLLRPLSVDAAGALSQFYYPPVAAVSVSYPKEAIRTECLIDGELKGFGQLHPRSQGVETLGTIYSSSLFPNRAPAGRVLLLNYIGGATNLGILSKKESELVEAVDRDLRKMLINPNAKDPLVLGVRVWQQAIPQFLVGHLDLLDAAKSSLRDNGYQGLFLGGNYVAGVALGRCVESAYEVASEVSNFLSQYAYK
cHHHHHHcccccccccccccccEEEEEccCEECcccccccccccccccHHHHHHHcccccccccccccccccHHHHHHHHHcHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHcccccccccccccccccccEEEcccccccHHHHHHHHHcccEEEcEEEEEEEEcccccEEEEEEcccccEEEEccEEEEccccHHHHHccccccHHHHHHHcccccccEEEEEEEcccccccccccccccccccEEEEEccccccEEEEEEcccccccccccccEEEEEEEccccccccccccHHHHHHHHHHHHHHHHcccccccccEEEEEEcccccccccccHHHHHHHHHHHHHHcccccEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHcc
MLKMVVDSGLKDDLVLGDPNAPRFVLWNGRLRPVPSSPTDLPIFDLMSIGGKIRAGLGALGLRPPPPGHEESVEEFVRRNLGDEVFERLIEPFCSGVYAGDPSKLSMKAAFGKVWKLEQTGGSIIGGTFKA*********************QTVGSFRKGLTMLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYVASSLLRPLSVDAAGALSQFYYPPVAAVSVSYPKEAIRTECLIDGELKGFGQLHPRSQGVETLGTIYSSSLFPNRAPAGRVLLLNYIGGATNLGILSKKESELVEAVDRDLRKMLINPNAKDPLVLGVRVWQQAIPQFLVGHLDLLDAAKSSLRDNGYQGLFLGGNYVAGVALGRCVESAYEVASEVSNFLS*****
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MLKMVVDSGLKDDLVLGDPNAPRFVLWNGRLRPVPSSPTDLPIFDLMSIGGKIRAGLGALGLRPPPPGHEESVEEFVRRNLGDEVFERLIEPFCSGVYAGDPSKLSMKAAFGKVWKLEQTGGSIIGGTFKAIQEKNKAPKQPRDPRLPKPKGQTVGSFRKGLTMLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYVASSLLRPLSVDAAGALSQFYYPPVAAVSVSYPKEAIRTECLIDGELKGFGQLHPRSQGVETLGTIYSSSLFPNRAPAGRVLLLNYIGGATNLGILSKKESELVEAVDRDLRKMLINPNAKDPLVLGVRVWQQAIPQFLVGHLDLLDAAKSSLRDNGYQGLFLGGNYVAGVALGRCVESAYEVASEVSNFLSQYAYK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Protoporphyrinogen oxidase, chloroplastic Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.probableP55826
Protoporphyrinogen oxidase, chloroplastic Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.probableQ9AR38
Protoporphyrinogen oxidase, chloroplastic Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.probableO24163

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
1.-.-.-Oxidoreductases.probable
1.3.-.-Acting on the CH-CH group of donors.probable
1.3.3.-With oxygen as acceptor.probable
1.3.3.4Protoporphyrinogen oxidase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1SEZ, chain A
Confidence level:very confident
Coverage over the Query: 2-134,145-414
View the alignment between query and template
View the model in PyMOL