Citrus Sinensis ID: 014965

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-----

MLRSCENQKILNKMGTAARSSINRKTNESMRLIVTTFVGVVFGFFIGVSFPTLSLTKLTLPSSLLPTVEYVEDQRSGLSTQRFLNVFNPLNRNNGSSTRAQVLNDTSKIWVPTNPRGAERLPPKIVRAESDFYLRRLWGNPNEDLTSQPKYLVTFTVGYDQKNNINAAIKKFSDNFTIVLFHYDGRTTEWNEFEWSKRAIHVSVRKQTKWWYAKRFLHPDIVASYDYIFIWDEDLGVEHFNAEEYIKLVRKHGLEISQPGLEPNKGLTWQMTKRRGDREVHKETEEKPGWCSNPHLPPCAAFVEIMAPVFSRDAWRCVWHMIQNDLVHGWGLDFALRKCVEPAHEKIGVVDSQWIVHQTVPSLGNQGESKDGKAPWQGVRERCKKEWTMFQGRMANAEKAYFQALGADTTDSSAH

cccccHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHEEEcccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEcccccHHHHHHHccccccEEEEEEEEcccccccccccccccEEEEEEcccHHHHHHHHHHcHHHHccccEEEEEccccccccccHHHHHHHHHHHccccccccccccccccHHHHHcccccccEEEccccccccccccccccccEEEEEcccccHHHHHHHHHcccccccccccHHHHHHHHHccccccEEEEEEEEEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccc

cccccHHHHHHHHcccccccccccccccHHHEEEEHHHHHHHHHHEEcccccEEEccccccccccccccccccccccccHHHHHHHHHHHcccccccccccccccccEEEEccccccccccccccEEccccccEccccccccccccccccEEEEEEEcHcHHHHHHHHHHHcccccEEEEEEEcccccccccccccccEEEEEEccccHHHHHHHcccccHcccccEEEEEccccccccccHHHHHHHHHHcccEEccccccccccEEEEEEEEccccEEEEEEEccccccccccccccHHHHHHHcHHccHHHHHHHHHHHHHHHHcccccccccHHcccccccEEEEEEcEEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccc

MLRSCENQKILNKMGTAARSSINRKTNESMRLIVTTFVGVVFGFFIgvsfptlsltkltlpssllptveyvedqrsglstqrflnvfnplnrnngsstraqvlndtskiwvptnprgaerlppkivraESDFYLRrlwgnpnedltsqpkYLVTFTVGYDQKNNINAAIKKFSDNFTIVLFHydgrttewnefewsKRAIHVSVRKQTKWwyakrflhpdivasyDYIFiwdedlgvehfNAEEYIKLVRKHgleisqpglepnkgltwqmtkrrgdrevhketeekpgwcsnphlppcaaFVEIMAPVFSRDAWRCVWHMIQNDLVHGWGLDFALrkcvepahekigvvdsqwivhqtvpslgnqgeskdgkapwqgVRERCKKEWTMFQGRMANAEKAYFQAlgadttdssah

mlrscenqkilnkmgtaarssinrktnesMRLIVTTFVGVVFGFFIGVSFPTLSLTKLTLPSSLLPTVEYVEDQRSGLSTQRFLNVFnplnrnngsstraqvlndtskiwvptnprgaerlppkivRAESDFYLRRLWgnpnedltsqpKYLVTFTVGYDQKNNINAAIKKFSDNFTIVLFHYDGRTTEWNEFEWSKRAIHVSVRKQTKWWYAKRFLHPDIVASYDYIFIWDEDLGVEHFNAEEYIKLVRKHGleisqpglepnkgltwqmtkRRGDREVHKeteekpgwcsnphLPPCAAFVEIMAPVFSRDAWRCVWHMIQNDLVHGWGLDFALRKCVEPAHEKIGVVDSQWIVHQTvpslgnqgeskdgkapwqGVRERCKKEWTMFQGRMANAEKAYFQALgadttdssah

MLRSCENQKILNKMGTAARSSINRKTNESMRLivttfvgvvfgffigvSFptlsltkltlpssllptVEYVEDQRSGLSTQRFLNVFNPLNRNNGSSTRAQVLNDTSKIWVPTNPRGAERLPPKIVRAESDFYLRRLWGNPNEDLTSQPKYLVTFTVGYDQKNNINAAIKKFSDNFTIVLFHYDGRTTEWNEFEWSKRAIHVSVRKQTKWWYAKRFLHPDIVASYDYIFIWDEDLGVEHFNAEEYIKLVRKHGLEISQPGLEPNKGLTWQMTKRRGDREVHKETEEKPGWCSNPHLPPCAAFVEIMAPVFSRDAWRCVWHMIQNDLVHGWGLDFALRKCVEPAHEKIGVVDSQWIVHQTVPSLGNQGESKDGKAPWQGVRERCKKEWTMFQGRMANAEKAYFQALGADTTDSSAH

*****************************MRLIVTTFVGVVFGFFIGVSFPTLSLTKLTLPSSLLPTVEYVEDQRSGLSTQRFLNVFNPL***************TSKIWVPT*********PKIVRAESDFYLRRLWGNPNEDLTSQPKYLVTFTVGYDQKNNINAAIKKFSDNFTIVLFHYDGRTTEWNEFEWSKRAIHVSVRKQTKWWYAKRFLHPDIVASYDYIFIWDEDLGVEHFNAEEYIKLVRKHGLEI*********************************WCSNPHLPPCAAFVEIMAPVFSRDAWRCVWHMIQNDLVHGWGLDFALRKCVEPAHEKIGVVDSQWIVHQTVP**************WQGVRERCKKEWTMFQGRMANAEKAYFQA***********

*******************************LIVTTFVGVVFGFFIGVSFPTLSLTKLTLPSSLLPTVEYVEDQR*****QRF*****************************************IVRAESDFYL***************KYLVTFTVGYDQKNNINAAIKKFSDNFTIVLFHYDGRTTEWNEFEWSKRAIHVSVRKQTKWWYAKRFLHPDIVASYDYIFIWDEDLGVEHFNAEEYIKLVRKHGLEISQPGLEPNKGLTWQMTKRRGDREVHKETEEKPGWCSNPHLPPCAAFVEIMAPVFSRDAWRCVWHMIQNDLVHGWGLDFALRKCVEPAHEKIGVVDSQWIVHQTV*********************RCKKEWTMFQGRMANAEKAYFQ************

MLRSCENQKILNKMGTAARSSINRKTNESMRLIVTTFVGVVFGFFIGVSFPTLSLTKLTLPSSLLPTVEYVEDQRSGLSTQRFLNVFNPLNRNNGSSTRAQVLNDTSKIWVPTNPRGAERLPPKIVRAESDFYLRRLWGNPNEDLTSQPKYLVTFTVGYDQKNNINAAIKKFSDNFTIVLFHYDGRTTEWNEFEWSKRAIHVSVRKQTKWWYAKRFLHPDIVASYDYIFIWDEDLGVEHFNAEEYIKLVRKHGLEISQPGLEPNKGLTWQM******************WCSNPHLPPCAAFVEIMAPVFSRDAWRCVWHMIQNDLVHGWGLDFALRKCVEPAHEKIGVVDSQWIVHQTVPS****************VRERCKKEWTMFQGRMANAEKAYFQALG*********

***************************ESMRLIVTTFVGVVFGFFIGVSFPTLSLTKLTLPSSLLPTVEYVEDQRSGLSTQRFLNVFNPLNR************DTSKIWVPTNPRGAERLPPKIVRAESDFYLRRLWGNPNEDLTSQPKYLVTFTVGYDQKNNINAAIKKFSDNFTIVLFHYDGRTTEWNEFEWSKRAIHVSVRKQTKWWYAKRFLHPDIVASYDYIFIWDEDLGVEHFNAEEYIKLVRKHGLEISQPGLEPNKGLTWQMTKRRGDREVHKETEEKPGWCSNPHLPPCAAFVEIMAPVFSRDAWRCVWHMIQNDLVHGWGLDFALRKCVEPAHEKIGVVDSQWIVHQTVPSLGN********APWQGVRERCKKEWTMFQGRMANAEKAYFQALG*********

iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

iiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

SSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		415
356540241		399	PREDICTED: uncharacterized protein LOC10	0.956	0.994	0.797	0.0
359473149		491	PREDICTED: uncharacterized protein LOC10	0.944	0.798	0.811	0.0
356567576		399	PREDICTED: uncharacterized protein LOC10	0.956	0.994	0.789	0.0
356512666		397	PREDICTED: uncharacterized protein LOC10	0.946	0.989	0.788	0.0
356525441		397	PREDICTED: uncharacterized protein LOC10	0.946	0.989	0.788	0.0
296081357		385	unnamed protein product [Vitis vinifera]	0.920	0.992	0.816	0.0
255578345		395	conserved hypothetical protein [Ricinus	0.946	0.994	0.767	0.0
357463241		399	hypothetical protein MTR_3g086610 [Medic	0.954	0.992	0.762	0.0
225452298		402	PREDICTED: uncharacterized protein LOC10	0.959	0.990	0.762	0.0
388518623		399	unknown [Medicago truncatula]	0.954	0.992	0.760	0.0

>gi\|356540241\|ref\|XP_003538598.1\| PREDICTED: uncharacterized protein LOC100778486 [Glycine max]	Back alignment and taxonomy information

 Score =  687 bits (1773), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 322/404 (79%), Positives = 357/404 (88%), Gaps = 7/404 (1%)

Query: 14  MGTAARSSINRKTNESMRLIVTTFVGVVFGFFIGVSFPTLSLTKLTLPSSLLPTVE--YV 71
           MG   RSS  RK +E MR  VTTF+ +V GFFIGVS PTLS+TKL LPS LLP+++  Y+
Sbjct: 1   MGIITRSSAGRKPSEIMRFFVTTFISIVLGFFIGVSVPTLSITKLNLPSGLLPSIDLSYI 60

Query: 72  EDQRSGLSTQRFLNVFNPLNRNNGSSTRAQVLNDTSKIWVPTNPRGAERLPPKIVRAESD 131
           ED+ +G     F+N     N N  SS++ Q+ NDTSKIWVP+NPRGAERLPP IV AESD
Sbjct: 61  EDRYTGRQAWSFMN-----NGNKRSSSQVQLSNDTSKIWVPSNPRGAERLPPGIVEAESD 115

Query: 132 FYLRRLWGNPNEDLTSQPKYLVTFTVGYDQKNNINAAIKKFSDNFTIVLFHYDGRTTEWN 191
           +YLRRLWG P+EDLTS+P YLVTFTVGYDQKNNI+AA+KKFS NFTI+LFHYDGRTTEW+
Sbjct: 116 YYLRRLWGKPSEDLTSRPNYLVTFTVGYDQKNNIDAAVKKFSGNFTILLFHYDGRTTEWD 175

Query: 192 EFEWSKRAIHVSVRKQTKWWYAKRFLHPDIVASYDYIFIWDEDLGVEHFNAEEYIKLVRK 251
           EFEWSK+AIHVSV KQTKWWYAKRFLHPDIVA YDYIFIWDEDLGVEHFNAEEYIKLVRK
Sbjct: 176 EFEWSKQAIHVSVHKQTKWWYAKRFLHPDIVAPYDYIFIWDEDLGVEHFNAEEYIKLVRK 235

Query: 252 HGLEISQPGLEPNKGLTWQMTKRRGDREVHKETEEKPGWCSNPHLPPCAAFVEIMAPVFS 311
           HGLEISQPGLEPN+GLTWQMTKRRGD+EVHK TEEKPGWCS+PHLPPCAAFVEIMAPVFS
Sbjct: 236 HGLEISQPGLEPNRGLTWQMTKRRGDQEVHKVTEEKPGWCSDPHLPPCAAFVEIMAPVFS 295

Query: 312 RDAWRCVWHMIQNDLVHGWGLDFALRKCVEPAHEKIGVVDSQWIVHQTVPSLGNQGESKD 371
           RDAWRCVWHMIQNDLVHGWGLDFALRKCVEPAHEKIGVVDSQWIVHQ +PSLGNQGES+ 
Sbjct: 296 RDAWRCVWHMIQNDLVHGWGLDFALRKCVEPAHEKIGVVDSQWIVHQGIPSLGNQGESQT 355

Query: 372 GKAPWQGVRERCKKEWTMFQGRMANAEKAYFQALGADTTDSSAH 415
           GKAPWQGVRERC+KEWTMFQ R+ANAE AY  ++G DT++S+AH
Sbjct: 356 GKAPWQGVRERCRKEWTMFQSRLANAEYAYHNSIGIDTSNSTAH 399

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|359473149\|ref\|XP_002282407.2\| PREDICTED: uncharacterized protein LOC100243914 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|356567576\|ref\|XP_003551994.1\| PREDICTED: uncharacterized protein LOC100811265 [Glycine max]	Back alignment and taxonomy information

>gi\|356512666\|ref\|XP_003525038.1\| PREDICTED: uncharacterized protein LOC100785650 isoform 1 [Glycine max]	Back alignment and taxonomy information

>gi\|356525441\|ref\|XP_003531333.1\| PREDICTED: uncharacterized protein LOC100805311 [Glycine max]	Back alignment and taxonomy information

>gi\|296081357\|emb\|CBI16790.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|255578345\|ref\|XP_002530039.1\| conserved hypothetical protein [Ricinus communis] gi\|223530455\|gb\|EEF32339.1\| conserved hypothetical protein [Ricinus communis]	Back alignment and taxonomy information

>gi\|357463241\|ref\|XP_003601902.1\| hypothetical protein MTR_3g086610 [Medicago truncatula] gi\|355490950\|gb\|AES72153.1\| hypothetical protein MTR_3g086610 [Medicago truncatula]	Back alignment and taxonomy information

>gi\|225452298\|ref\|XP_002272341.1\| PREDICTED: uncharacterized protein LOC100264636 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|388518623\|gb\|AFK47373.1\| unknown [Medicago truncatula]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		415
TAIR\|locus:2008640		404	AT1G67850 "AT1G67850" [Arabido	0.956	0.982	0.681	1e-155
TAIR\|locus:2205140		382	AT1G08040 [Arabidopsis thalian	0.713	0.774	0.807	1.4e-148
TAIR\|locus:2057557		374	AT2G28310 "AT2G28310" [Arabido	0.725	0.804	0.787	4.7e-146
TAIR\|locus:2086721		398	AT3G27470 "AT3G27470" [Arabido	0.831	0.866	0.707	5.3e-143
TAIR\|locus:2031905		401	AT1G13000 [Arabidopsis thalian	0.946	0.980	0.609	2.2e-137
TAIR\|locus:2079291		396	AT3G26440 [Arabidopsis thalian	0.766	0.803	0.720	1.8e-133
TAIR\|locus:504956279		381	AT1G24570 [Arabidopsis thalian	0.713	0.776	0.744	5.2e-129
TAIR\|locus:2008425		425	AT1G61240 [Arabidopsis thalian	0.626	0.611	0.468	2.5e-65
TAIR\|locus:2202124		438	AT1G11170 [Arabidopsis thalian	0.631	0.598	0.468	2.9e-64
TAIR\|locus:2124608		389	AT4G18530 "AT4G18530" [Arabido	0.657	0.701	0.448	6e-64

TAIR\|locus:2008640 AT1G67850 "AT1G67850" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 1518 (539.4 bits), Expect = 1.0e-155, P = 1.0e-155
 Identities = 274/402 (68%), Positives = 322/402 (80%)

Query:    14 MGTAARSSINRKTNESMRLXXXXXXXXXXXXXXXXSFXXXXXXXXXXXXXX--XXXVEYV 71
             MG  +RSSI+RK+ + M++                SF                   + Y+
Sbjct:     1 MGIFSRSSISRKSKDGMKIIATAFFGVTFGFLIGISFPSLSITKVSLPTNFLPSNDLSYI 60

Query:    72 EDQRSGLSTQRFLNVFNPLNRNNGSSTRAQVLNDTSKIWVPTNPRGAERLPPKIVRAESD 131
             E++ S ++T      ++  ++ N SS+   +  D SKIWVP+NPRGAE LPP +V AESD
Sbjct:    61 EEKGSKIATPESHKAWSS-SKGNDSSSSTPI--DKSKIWVPSNPRGAEMLPPGMVAAESD 117

Query:   132 FYLRRLWGNPNEDLTSQPKYLVTFTVGYDQKNNINAAIKKFSDNFTIVLFHYDGRTTEWN 191
             FYLRRLWG P+EDL S+P+YL TFTVG +QK NI+A +KKFS+NFTIVLFHYDGR TEW+
Sbjct:   118 FYLRRLWGLPHEDLKSEPRYLATFTVGINQKANIDACVKKFSENFTIVLFHYDGRVTEWD 177

Query:   192 EFEWSKRAIHVSVRKQTKWWYAKRFLHPDIVASYDYIFIWDEDLGVEHFNAEEYIKLVRK 251
             EFEWSK AIH+SVRKQTKWWYAKRFLHPDIVA YDYIF+WDEDLGVEHFNAEEY+K+V+K
Sbjct:   178 EFEWSKTAIHISVRKQTKWWYAKRFLHPDIVARYDYIFVWDEDLGVEHFNAEEYVKMVKK 237

Query:   252 HGLEISQPGLEPNKGLTWQMTKRRGDREVHKETEEKPGWCSNPHLPPCAAFVEIMAPVFS 311
             HGLEISQPGLEPN+GLTWQMTKRRGD EVHK TEE+PGWCS+PHLPPCAAFVEIMAPVFS
Sbjct:   238 HGLEISQPGLEPNQGLTWQMTKRRGDMEVHKITEERPGWCSDPHLPPCAAFVEIMAPVFS 297

Query:   312 RDAWRCVWHMIQNDLVHGWGLDFALRKCVEPAHEKIGVVDSQWIVHQTVPSLGNQGESKD 371
             R+AWRCVWH+IQNDLVHGWGLDFALR+CVEPAHEKIGVVDSQW+VHQ+ PSLGNQGE+ D
Sbjct:   298 RNAWRCVWHVIQNDLVHGWGLDFALRRCVEPAHEKIGVVDSQWVVHQSFPSLGNQGEATD 357

Query:   372 GKAPWQGVRERCKKEWTMFQGRMANAEKAYFQALGADTTDSS 413
             GKAPWQGVR+RCKKEWTMFQ RMANAEK YF++L  + + +S
Sbjct:   358 GKAPWQGVRDRCKKEWTMFQSRMANAEKDYFKSLQVEGSSNS 399

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR\|locus:2205140 AT1G08040 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2057557 AT2G28310 "AT2G28310" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2086721 AT3G27470 "AT3G27470" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2031905 AT1G13000 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2079291 AT3G26440 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:504956279 AT1G24570 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2008425 AT1G61240 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2202124 AT1G11170 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2124608 AT4G18530 "AT4G18530" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00030765001	SubName- Full=Chromosome chr1 scaffold_5, whole genome shotgun sequence; (385 aa)
		(Vitis vinifera)
Predicted Functional Partners:
		Sorry, there are no predicted associations at the current settings.

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		415
pfam05212		294	pfam05212, DUF707, Protein of unknown function (DU	0.0

>gnl\|CDD\|218501 pfam05212, DUF707, Protein of unknown function (DUF707)	Back alignment and domain information

 Score =  589 bits (1521), Expect = 0.0
 Identities = 230/294 (78%), Positives = 264/294 (89%), Gaps = 1/294 (0%)

Query: 109 IWVPTNPRGAERLPPKIVRAESDFYLRRLWGNPNEDLTSQPKYLVTFTVGYDQKNNINAA 168
           IWVPTNPRGAERLPP IV +ESDFYLRRLWG+P ED+ S+PKYL+ FTVGY QK N++A 
Sbjct: 1   IWVPTNPRGAERLPPGIVVSESDFYLRRLWGSPEEDVASKPKYLLAFTVGYSQKANVDAC 60

Query: 169 IKKFSDNFTIVLFHYDGRTTEWNEFEWSKRAIHVSVRKQTKWWYAKRFLHPDIVASYDYI 228
           +KKFSDNFTIVLFHYDGRTTEW+E EWSK+AIHVS +KQTKWW+AKRFLHPDIVA Y+YI
Sbjct: 61  VKKFSDNFTIVLFHYDGRTTEWDELEWSKKAIHVSAKKQTKWWFAKRFLHPDIVAPYEYI 120

Query: 229 FIWDEDLGVEHFNAEEYIKLVRKHGLEISQPGLEPNKG-LTWQMTKRRGDREVHKETEEK 287
           F+WDEDLGV++F+AEEYIK+V+KHGLEISQPGL+P++G +TW++TKRRGD EVHK+T EK
Sbjct: 121 FLWDEDLGVDNFDAEEYIKIVKKHGLEISQPGLDPDRGQITWRITKRRGDGEVHKDTREK 180

Query: 288 PGWCSNPHLPPCAAFVEIMAPVFSRDAWRCVWHMIQNDLVHGWGLDFALRKCVEPAHEKI 347
              C N   PPC  FVEIMAPVFSRDAWRCVWHMIQNDLVHGWGLDFALR+CVEPAHEKI
Sbjct: 181 GRCCDNSTGPPCTGFVEIMAPVFSRDAWRCVWHMIQNDLVHGWGLDFALRRCVEPAHEKI 240

Query: 348 GVVDSQWIVHQTVPSLGNQGESKDGKAPWQGVRERCKKEWTMFQGRMANAEKAY 401
           GVVDSQW+VHQ +PSLG+QG +++GKAPWQGVR+RCK EWTMFQ R A AEK Y
Sbjct: 241 GVVDSQWVVHQGIPSLGSQGTAENGKAPWQGVRDRCKAEWTMFQRRWAAAEKEY 294

This family consists of several uncharacterized proteins from Arabidopsis thaliana. Length = 294

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		415
PF05212		294	DUF707: Protein of unknown function (DUF707); Inte	100.0
cd04185		202	GT_2_like_b Subfamily of Glycosyltransferase Famil	94.72
TIGR01556		281	rhamnosyltran L-rhamnosyltransferase. Rhamnolipids	94.61
cd02510		299	pp-GalNAc-T pp-GalNAc-T initiates the formation of	94.37
cd04186		166	GT_2_like_c Subfamily of Glycosyltransferase Famil	94.35
cd02526		237	GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr	93.34
PF13641		228	Glyco_tranf_2_3: Glycosyltransferase like family 2	91.6
cd02520		196	Glucosylceramide_synthase Glucosylceramide synthas	90.76
cd04195		201	GT2_AmsE_like GT2_AmsE_like is involved in exopoly	89.27
cd02525		249	Succinoglycan_BP_ExoA ExoA is involved in the bios	88.97
PLN02726		243	dolichyl-phosphate beta-D-mannosyltransferase	88.64
cd06433		202	GT_2_WfgS_like WfgS and WfeV are involved in O-ant	85.4
COG1216		305	Predicted glycosyltransferases [General function p	83.77
cd06421		234	CESA_CelA_like CESA_CelA_like are involved in the	83.22
cd06437		232	CESA_CaSu_A2 Cellulose synthase catalytic subunit	80.56

>PF05212 DUF707: Protein of unknown function (DUF707); InterPro: IPR007877 This family consists of uncharacterised proteins from Arabidopsis thaliana	Back alignment and domain information

Probab=100.00  E-value=3.3e-128  Score=935.53  Aligned_cols=293  Identities=65%  Similarity=1.194  Sum_probs=287.5

Q ss_pred             eeccCCCCCCCCCCCcceecCCccccccccCCCCCCCCCCCceEEEEEeccccccchHHHHhccCCCcEEEEEEECCCCC
Q 014965          109 IWVPTNPRGAERLPPKIVRAESDFYLRRLWGNPNEDLTSQPKYLVTFTVGYDQKNNINAAIKKFSDNFTIVLFHYDGRTT  188 (415)
Q Consensus       109 ~~~~~~p~g~e~lP~giv~~~sd~~l~rLwg~p~~d~~~~~kyLva~~VG~kqk~~Vd~~v~kf~~nFdv~LfhYDG~v~  188 (415)
                      ||++++|+|+|+||+|||+++|||+||||||.|.+|...++|||||||||+|||++||++|+||++|||||||||||+++
T Consensus         1 ~~~~~~p~g~e~Lp~giv~~~sd~~~r~lw~~p~~~~~~~~k~Lla~~VG~kqk~~vd~~v~Kf~~nF~i~LfhYDg~vd   80 (294)
T PF05212_consen    1 IWVPCNPRGAERLPPGIVVRESDLELRPLWGNPSEDLPKKPKYLLAMTVGIKQKDNVDAIVKKFSDNFDIMLFHYDGRVD   80 (294)
T ss_pred             CCcCCCCCccccCCCCccccCCCceeeecCCCccccccCCCceEEEEEecHHHHhhhhHHHhhhccCceEEEEEecCCcC
Confidence            68999999999999999999999999999999999999899999999999999999999999999999999999999999


Q ss_pred             cccccccCCcceEEEEeccccccccccccCcccccCccEEEEecCccccCCCCHHHHHHHHHHhCCcccCCCccCCCC-c
Q 014965          189 EWNEFEWSKRAIHVSVRKQTKWWYAKRFLHPDIVASYDYIFIWDEDLGVEHFNAEEYIKLVRKHGLEISQPGLEPNKG-L  267 (415)
Q Consensus       189 ~W~d~~Ws~~aihv~~~kqtKWw~akRFLHPdiv~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~gLeISQPALd~~S~-i  267 (415)
                      +|++|+||++||||+++|||||||||||||||+|++|||||||||||+||+|+|+|||+||++||||||||||+++++ +
T Consensus        81 ~w~~~~ws~~aiHv~~~kqtKww~akrfLHPdiv~~YdYiflwDeDL~vd~f~~~ry~~Ivk~~gLeISQPALd~~~~~~  160 (294)
T PF05212_consen   81 EWDDFEWSDRAIHVSARKQTKWWFAKRFLHPDIVAPYDYIFLWDEDLGVDHFDINRYFEIVKKEGLEISQPALDPDSSEI  160 (294)
T ss_pred             chhhcccccceEEEEeccceEEeehhhhcChhhhccceeEEecCCccCcCcCCHHHHHHHHHHhCCcccCcccCCCCcee
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999999875 9


Q ss_pred             ceeeeeecCCcceeeeeccCCCCCCCCCCCCcccEEEeccccccHHHHHHhhhhhcCCCcceehhhHhhhHhhcCCCCeE
Q 014965          268 TWQMTKRRGDREVHKETEEKPGWCSNPHLPPCAAFVEIMAPVFSRDAWRCVWHMIQNDLVHGWGLDFALRKCVEPAHEKI  347 (415)
Q Consensus       268 sh~iT~R~~~~~vHr~~~~~~g~C~~~~~ppcT~FVEiMAPVFSR~Awrcvw~miqNDLvhGWGLDf~w~~c~~~~~~kI  347 (415)
                      ||++|+|++++++||.+.+++++|+++++||||||||||||||||+|||||||||||||+|||||||+|++|++.+++||
T Consensus       161 ~~~iT~R~~~~~vhr~~~~~~~~~~~~~~ppct~fVEiMAPVFSr~Awrcvw~miqNDLvhGWGLDf~~~~c~~~~~~ki  240 (294)
T PF05212_consen  161 HHPITKRRPDSEVHRKTRGGPRCCDDSTGPPCTGFVEIMAPVFSRAAWRCVWHMIQNDLVHGWGLDFKWGYCAGDRHKKI  240 (294)
T ss_pred             eeeEEeecCCceeEeccCCCCCcCCCCCCCCcceEEEEecceechHHHHHHHhcccCCCccccchhhhHHHHhccccccE
Confidence            99999999999999988888899999999999999999999999999999999999999999999999999998889999


Q ss_pred             EEEeeeeeeecccCcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014965          348 GVVDSQWIVHQTVPSLGNQGESKDGKAPWQGVRERCKKEWTMFQGRMANAEKAY  401 (415)
Q Consensus       348 GVVDa~~VvH~gvPtLg~~g~~~~~~~~~~~VR~r~~~E~~~F~~R~~~A~k~~  401 (415)
                      ||||||||+|+++||||+||.++++.++|.+||+||++||++|++||++|+|+|
T Consensus       241 GVVDs~~VvH~gvptLG~~~~~~~~~~~~~~Vr~r~~~E~~~F~~R~~~a~~~~  294 (294)
T PF05212_consen  241 GVVDSQYVVHTGVPTLGGQGNSEKGKDPREEVRRRSFAEMRIFQKRWANAVKEY  294 (294)
T ss_pred             EEEeeEEEEEcCCCcCCCccccccCCchHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            999999999999999999999989999999999999999999999999999987

>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function	Back alignment and domain information

>TIGR01556 rhamnosyltran L-rhamnosyltransferase	Back alignment and domain information

>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans	Back alignment and domain information

>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function	Back alignment and domain information

>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase	Back alignment and domain information

>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A	Back alignment and domain information

>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis	Back alignment and domain information

>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis	Back alignment and domain information

>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan	Back alignment and domain information

>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase	Back alignment and domain information

>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis	Back alignment and domain information

>COG1216 Predicted glycosyltransferases [General function prediction only]	Back alignment and domain information

>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose	Back alignment and domain information

>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		415
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 41.4 bits (96), Expect = 5e-04
 Identities = 48/352 (13%), Positives = 93/352 (26%), Gaps = 133/352 (37%)

Query: 31  RLIVTT-------FVGVVFGFFIGVSFPTLSLTK----------LTLPSSLLPTVEYV-- 71
           ++++TT       F+       I +   +++LT           L      LP  E +  
Sbjct: 267 KILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLP-REVLTT 325

Query: 72  ---------EDQRSGLST-QRFLNV-FNPLNRNNGSSTRAQ-------------VLNDTS 107
                    E  R GL+T   + +V  + L     SS                 V   ++
Sbjct: 326 NPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSA 385

Query: 108 KIWVPTNPRGAERLPPKIVRAESDFYLRRLWGNPNED--------------LTSQPKYLV 153
            I            P  +        L  +W +  +               +  QPK   
Sbjct: 386 HI------------PTIL--------LSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKES- 424

Query: 154 TFTVGYD------QKNNINAAI-KKFSDNFTIV----------------LFHYDG----- 185
           T ++          K     A+ +   D++ I                  + + G     
Sbjct: 425 TISI-PSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKN 483

Query: 186 --RTTEWNEFE-------WSKRAIHVSVRKQTKWWYAKRFLHPDI--VASY-DYIFIWDE 233
                    F        + ++ I    R  +  W A   +   +  +  Y  YI   D 
Sbjct: 484 IEHPERMTLFRMVFLDFRFLEQKI----RHDSTAWNASGSILNTLQQLKFYKPYICDNDP 539

Query: 234 DL-----GVEHF--NAEEYIKLVRKHGLEISQPGLEPNKGLTWQMTKRRGDR 278
                   +  F    EE   L+     ++ +  L       ++   ++  R
Sbjct: 540 KYERLVNAILDFLPKIEE--NLICSKYTDLLRIALMAEDEAIFEEAHKQVQR 589

PyMOL of 1vt4

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		415
1qg8_A		255	Protein (spore coat polysaccharide biosynthesis P	93.26
3f1y_A		387	Mannosyl-3-phosphoglycerate synthase; GT-A type gl	91.32
2d7i_A		570	Polypeptide N-acetylgalactosaminyltransferase 10;	89.93
2ffu_A		501	Ppgalnact-2, polypeptide N-acetylgalactosaminyltra	89.92
1xhb_A		472	Polypeptide N-acetylgalactosaminyltransferase 1; g	89.37
2z86_A		625	Chondroitin synthase; GT-A, glycosyltransferase A,	82.87

>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*	Back alignment and structure

Probab=93.26  E-value=0.22  Score=43.68  Aligned_cols=119  Identities=10%  Similarity=-0.037  Sum_probs=67.8

Q ss_pred             cCccEEEEecCccccCCCCHHHHHHHHHHh-CCcccCCCcc-----CCCCcceeeeeecCCcceeeeeccCCCCCCCCCC
Q 014965          223 ASYDYIFIWDEDLGVEHFNAEEYIKLVRKH-GLEISQPGLE-----PNKGLTWQMTKRRGDREVHKETEEKPGWCSNPHL  296 (415)
Q Consensus       223 ~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~-gLeISQPALd-----~~S~ish~iT~R~~~~~vHr~~~~~~g~C~~~~~  296 (415)
                      +..|||++.|+|..++.-.++++++.++++ +..+..+...     .+....+.. . .+...+..              
T Consensus        87 a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~--------------  150 (255)
T 1qg8_A           87 AEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNENRDIVKET-V-RPAAQVTW--------------  150 (255)
T ss_dssp             CCCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC---CEEEEE-E-ECCCSCBS--------------
T ss_pred             cCCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEeceEEEEeCCCCcchhhc-c-CchHHHHH--------------
Confidence            578999999999999988899999999876 6666555432     111110000 0 00000000              


Q ss_pred             CCcccEEEeccccccHHHHHHhh-hh---hcCCCcceehhhHhhhHhhcCCCCeEEEEeeeeeeecc
Q 014965          297 PPCAAFVEIMAPVFSRDAWRCVW-HM---IQNDLVHGWGLDFALRKCVEPAHEKIGVVDSQWIVHQT  359 (415)
Q Consensus       297 ppcT~FVEiMAPVFSR~Awrcvw-~m---iqNDLvhGWGLDf~w~~c~~~~~~kIGVVDa~~VvH~g  359 (415)
                       ....++-..+-+|+|++++.+- .+   +..+.....+-|+.+...+... .++..++...+.|+.
T Consensus       151 -~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~~~~~~eD~~~~~r~~~~-g~~~~~~~~~~~~r~  215 (255)
T 1qg8_A          151 -NAPCAIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVNHF-YPFYPLDEELDLNYI  215 (255)
T ss_dssp             -CCTTTSCGGGEEEETHHHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHTTT-CCBEEEEEEEEEEEE
T ss_pred             -hhcCCCccceEEEEHHHHHhhcccccccccCCcccchHHHHHHHHHHHHh-CCEEEecCcEEEEEE
Confidence             0011222234579999998774 33   1112222345676665444333 369999998888864

PyMOL of 1qg8

>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*	Back alignment and structure

>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*	Back alignment and structure

>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*	Back alignment and structure

>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17	Back alignment and structure

>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		415
d1xhba2		328	Polypeptide N-acetylgalactosaminyltransferase 1, N	90.87

>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=90.87  E-value=0.38  Score=42.13  Aligned_cols=139  Identities=11%  Similarity=0.030  Sum_probs=75.4

Q ss_pred             ccCccEEEEecCccccCCCCHHHHHHHHHHhCCcccCCCccCCCCcceee------eee--cCCcceeeeecc---CCCC
Q 014965          222 VASYDYIFIWDEDLGVEHFNAEEYIKLVRKHGLEISQPGLEPNKGLTWQM------TKR--RGDREVHKETEE---KPGW  290 (415)
Q Consensus       222 v~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~gLeISQPALd~~S~ish~i------T~R--~~~~~vHr~~~~---~~g~  290 (415)
                      .+.-|||++.|+|..++.-.++++++.+++..-.+..|.++.-..-++..      +..  ......+.....   ....
T Consensus       105 ~a~gd~i~flD~D~~~~p~~l~~l~~~~~~~~~~~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (328)
T d1xhba2         105 VSRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRR  184 (328)
T ss_dssp             HCCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEEEECCHHHHHHT
T ss_pred             hhhcceeeecCcccccChhHHHHHHHHHhcCCCeEEecceeeeccCceeeccCCccccccccccccccccccchhhhhcc
Confidence            36789999999999999999999999999988887777653211111110      000  000111111000   0001


Q ss_pred             CCCCCCCCcccEEEeccccccHHHHHHhhhhhcCCCcceeh-hhHhhhHhhcCCCCeEEEEeeeeeeecccCc
Q 014965          291 CSNPHLPPCAAFVEIMAPVFSRDAWRCVWHMIQNDLVHGWG-LDFALRKCVEPAHEKIGVVDSQWIVHQTVPS  362 (415)
Q Consensus       291 C~~~~~ppcT~FVEiMAPVFSR~Awrcvw~miqNDLvhGWG-LDf~w~~c~~~~~~kIGVVDa~~VvH~gvPt  362 (415)
                      ..+...+..+.++...+=.++|++|..+=.+ . +....|| =|.-+..-+.....+|..+-...|.|...-.
T Consensus       185 ~~~~~~~~~~~~~~g~~~~irr~~f~~vGgf-D-e~~~~~g~ED~Dl~~R~~~~G~~i~~~p~~~v~H~~~~~  255 (328)
T d1xhba2         185 KGDRTLPVRTPTMAGGLFSIDRDYFQEIGTY-D-AGMDIWGGENLEISFRIWQCGGTLEIVTCSHVGHVFRKA  255 (328)
T ss_dssp             TTCTTSCEECSBCCSSSEEEEHHHHHHTTSC-C-TTSCTTCCCCSHHHHHHHHTTCEEEEEEEEEEEEEC---
T ss_pred             ccccccccccceecceeeeeeHHHHHHhCCC-C-CCCcCcCchHHHHHHHHHHhCCeEEEeCCeEEEEeCCCC
Confidence            1111222222333333335799999987433 2 3334564 4544443333346799999999999965443

PyMOL of d1xhba2